Query 017785
Match_columns 366
No_of_seqs 184 out of 1838
Neff 8.4
Searched_HMMs 46136
Date Fri Mar 29 03:25:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017785.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017785hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2882 p-Nitrophenyl phosphat 100.0 2.1E-46 4.5E-51 337.8 23.7 288 74-363 13-304 (306)
2 COG0647 NagD Predicted sugar p 100.0 1.2E-43 2.6E-48 323.7 23.9 264 78-364 3-267 (269)
3 PLN02645 phosphoglycolate phos 100.0 5E-43 1.1E-47 331.8 28.9 298 69-366 14-311 (311)
4 PRK10444 UMP phosphatase; Prov 100.0 5.1E-40 1.1E-44 300.9 25.5 245 83-358 1-245 (248)
5 TIGR01452 PGP_euk phosphoglyco 100.0 5.9E-40 1.3E-44 306.7 26.1 275 82-358 1-279 (279)
6 TIGR01457 HAD-SF-IIA-hyp2 HAD- 100.0 1.4E-39 3E-44 299.1 26.0 249 83-358 1-249 (249)
7 TIGR01458 HAD-SF-IIA-hyp3 HAD- 100.0 3.1E-36 6.7E-41 278.0 25.9 249 83-362 1-254 (257)
8 TIGR01456 CECR5 HAD-superfamil 100.0 4.8E-36 1E-40 285.2 20.2 270 85-362 2-320 (321)
9 KOG3040 Predicted sugar phosph 100.0 1.6E-33 3.4E-38 239.9 19.9 252 81-363 5-257 (262)
10 TIGR01460 HAD-SF-IIA Haloacid 100.0 3.2E-33 7E-38 254.8 21.7 234 86-332 1-236 (236)
11 TIGR01459 HAD-SF-IIA-hyp4 HAD- 100.0 4.1E-28 8.9E-33 222.2 22.2 233 77-331 2-242 (242)
12 KOG1618 Predicted phosphatase 99.9 2.7E-22 5.8E-27 181.5 12.5 248 85-336 37-346 (389)
13 TIGR01422 phosphonatase phosph 99.9 4.8E-22 1E-26 183.2 11.4 85 273-362 144-252 (253)
14 PRK13226 phosphoglycolate phos 99.9 5.4E-21 1.2E-25 173.7 14.0 88 270-362 136-224 (229)
15 PRK13478 phosphonoacetaldehyde 99.9 3.1E-21 6.8E-26 179.2 11.8 87 273-364 146-256 (267)
16 PRK13288 pyrophosphatase PpaX; 99.8 1.4E-21 3E-26 175.6 8.1 128 228-364 85-212 (214)
17 TIGR03351 PhnX-like phosphonat 99.8 9.4E-21 2E-25 170.8 12.5 87 271-362 131-219 (220)
18 COG0637 Predicted phosphatase/ 99.8 2.4E-21 5.2E-26 174.9 8.4 92 267-363 124-217 (221)
19 COG0546 Gph Predicted phosphat 99.8 4E-21 8.7E-26 173.5 9.9 128 227-363 91-218 (220)
20 PLN03243 haloacid dehalogenase 99.8 6.6E-21 1.4E-25 175.9 11.0 125 227-363 111-235 (260)
21 PLN02770 haloacid dehalogenase 99.8 1.2E-20 2.5E-25 173.5 10.7 122 227-358 110-231 (248)
22 TIGR01449 PGP_bact 2-phosphogl 99.8 2.4E-21 5.1E-26 173.7 5.9 124 229-361 89-212 (213)
23 TIGR02253 CTE7 HAD superfamily 99.8 4.2E-20 9.1E-25 166.6 13.2 126 227-359 96-221 (221)
24 PLN02779 haloacid dehalogenase 99.8 9.3E-20 2E-24 170.8 15.3 76 277-359 194-269 (286)
25 TIGR01454 AHBA_synth_RP 3-amin 99.8 2.2E-20 4.9E-25 166.6 8.9 128 227-363 77-204 (205)
26 PRK11587 putative phosphatase; 99.8 8.2E-20 1.8E-24 164.6 12.2 76 276-359 129-204 (218)
27 PRK10826 2-deoxyglucose-6-phos 99.8 4.3E-20 9.2E-25 166.9 10.2 125 227-361 94-218 (222)
28 PRK10748 flavin mononucleotide 99.8 2.5E-19 5.4E-24 163.7 14.1 124 227-362 115-238 (238)
29 PRK13222 phosphoglycolate phos 99.8 4E-20 8.7E-25 167.1 8.7 130 227-365 95-224 (226)
30 PLN02575 haloacid dehalogenase 99.8 4E-20 8.7E-25 177.2 8.7 120 228-359 219-338 (381)
31 PRK13223 phosphoglycolate phos 99.8 1.3E-19 2.9E-24 168.6 12.0 128 227-363 103-230 (272)
32 PF13344 Hydrolase_6: Haloacid 99.8 3.1E-19 6.7E-24 140.9 11.7 101 86-188 1-101 (101)
33 PRK06769 hypothetical protein; 99.8 1.1E-18 2.4E-23 151.6 16.0 75 283-362 91-171 (173)
34 TIGR00213 GmhB_yaeD D,D-heptos 99.8 1.9E-18 4.2E-23 150.6 16.1 71 283-359 104-175 (176)
35 PRK13225 phosphoglycolate phos 99.8 1.3E-19 2.9E-24 168.4 8.9 75 285-364 195-269 (273)
36 PLN02940 riboflavin kinase 99.8 9E-20 1.9E-24 177.3 7.5 85 269-360 134-218 (382)
37 PRK10563 6-phosphogluconate ph 99.8 4.6E-19 1E-23 159.9 8.2 121 229-363 92-213 (221)
38 PRK08942 D,D-heptose 1,7-bisph 99.8 2.1E-17 4.6E-22 144.7 17.4 76 283-364 101-178 (181)
39 TIGR02254 YjjG/YfnB HAD superf 99.8 4.1E-18 9E-23 153.6 13.0 125 227-362 99-224 (224)
40 TIGR01990 bPGM beta-phosphoglu 99.8 2.9E-19 6.3E-24 156.5 4.3 61 269-330 125-185 (185)
41 PRK09449 dUMP phosphatase; Pro 99.8 1.5E-17 3.2E-22 150.4 14.5 126 227-363 97-223 (224)
42 PRK14988 GMP/IMP nucleotidase; 99.8 2.6E-18 5.7E-23 155.5 9.4 124 227-363 95-219 (224)
43 PLN02919 haloacid dehalogenase 99.8 2.9E-18 6.2E-23 185.2 11.2 82 271-358 204-285 (1057)
44 PRK06698 bifunctional 5'-methy 99.7 4.4E-18 9.4E-23 169.9 10.3 122 229-364 334-455 (459)
45 PRK10725 fructose-1-P/6-phosph 99.7 1.6E-18 3.4E-23 152.3 5.2 93 232-330 94-186 (188)
46 TIGR02009 PGMB-YQAB-SF beta-ph 99.7 1.8E-18 3.8E-23 151.5 4.3 95 228-329 91-185 (185)
47 COG1011 Predicted hydrolase (H 99.7 6.2E-17 1.3E-21 146.5 13.9 128 227-364 101-228 (229)
48 TIGR01428 HAD_type_II 2-haloal 99.7 4.7E-18 1E-22 150.8 4.8 102 227-333 94-195 (198)
49 TIGR02252 DREG-2 REG-2-like, H 99.7 6.9E-17 1.5E-21 143.8 11.5 97 227-328 107-203 (203)
50 PF13242 Hydrolase_like: HAD-h 99.7 4E-17 8.6E-22 121.8 7.3 74 283-358 2-75 (75)
51 KOG2914 Predicted haloacid-hal 99.7 8.3E-17 1.8E-21 143.4 10.3 206 81-359 8-219 (222)
52 TIGR01656 Histidinol-ppas hist 99.7 4.4E-16 9.5E-21 131.7 13.9 48 284-332 100-147 (147)
53 TIGR01662 HAD-SF-IIIA HAD-supe 99.7 8.1E-16 1.8E-20 127.5 14.5 46 284-330 84-131 (132)
54 TIGR02247 HAD-1A3-hyp Epoxide 99.7 7.5E-17 1.6E-21 144.5 7.8 109 227-338 96-204 (211)
55 PHA02597 30.2 hypothetical pro 99.7 3.1E-16 6.7E-21 139.0 11.6 118 227-360 76-196 (197)
56 PLN02811 hydrolase 99.7 4.9E-17 1.1E-21 146.7 5.8 83 270-359 120-207 (220)
57 PRK10530 pyridoxal phosphate ( 99.6 4.2E-16 9.2E-21 144.9 8.1 249 82-356 2-259 (272)
58 PRK09456 ?-D-glucose-1-phospha 99.6 1.7E-15 3.7E-20 134.6 11.2 109 227-340 86-195 (199)
59 TIGR01261 hisB_Nterm histidino 99.6 2.4E-15 5.3E-20 128.8 11.5 53 284-337 102-154 (161)
60 TIGR01668 YqeG_hyp_ppase HAD s 99.6 5E-15 1.1E-19 128.3 11.2 57 284-340 90-146 (170)
61 COG0241 HisB Histidinol phosph 99.6 2.3E-14 5E-19 123.3 14.9 163 83-363 5-177 (181)
62 TIGR01993 Pyr-5-nucltdase pyri 99.6 2.9E-15 6.3E-20 131.3 8.0 95 227-329 86-184 (184)
63 TIGR01509 HAD-SF-IA-v3 haloaci 99.6 6.3E-15 1.4E-19 128.4 9.9 96 228-329 88-183 (183)
64 TIGR01664 DNA-3'-Pase DNA 3'-p 99.6 2.6E-14 5.7E-19 123.1 12.5 45 284-328 107-160 (166)
65 PRK01158 phosphoglycolate phos 99.6 1.7E-14 3.6E-19 130.9 11.6 58 82-142 2-60 (230)
66 PRK10513 sugar phosphate phosp 99.6 2.8E-15 6.2E-20 139.3 6.2 70 82-154 2-72 (270)
67 KOG3085 Predicted hydrolase (H 99.6 8.2E-15 1.8E-19 131.2 8.8 107 228-339 116-222 (237)
68 COG2179 Predicted hydrolase of 99.6 1.3E-14 2.7E-19 121.0 9.2 49 284-332 92-140 (175)
69 PLN02954 phosphoserine phospha 99.5 2.1E-13 4.5E-18 123.2 13.6 72 283-362 152-223 (224)
70 TIGR01482 SPP-subfamily Sucros 99.5 5.2E-13 1.1E-17 120.6 15.0 54 86-142 1-55 (225)
71 TIGR01548 HAD-SF-IA-hyp1 haloa 99.5 1.4E-13 3.1E-18 121.9 10.9 86 231-322 112-197 (197)
72 PF13419 HAD_2: Haloacid dehal 99.5 2.4E-14 5.2E-19 123.1 5.0 98 227-329 79-176 (176)
73 COG0561 Cof Predicted hydrolas 99.5 2.4E-14 5.2E-19 132.7 5.3 67 82-154 2-69 (264)
74 PRK09484 3-deoxy-D-manno-octul 99.5 3.5E-13 7.7E-18 118.1 12.2 70 284-363 94-169 (183)
75 TIGR01487 SPP-like sucrose-pho 99.5 1.5E-12 3.2E-17 117.0 15.7 57 83-142 1-58 (215)
76 PRK10976 putative hydrolase; P 99.5 6E-12 1.3E-16 116.8 20.1 57 83-142 2-59 (266)
77 cd01427 HAD_like Haloacid deha 99.5 5.8E-13 1.2E-17 109.3 11.9 50 279-329 90-139 (139)
78 PRK03669 mannosyl-3-phosphogly 99.5 2.2E-12 4.7E-17 120.2 16.8 69 81-154 5-74 (271)
79 PRK15126 thiamin pyrimidine py 99.5 1.9E-13 4.2E-18 127.2 9.7 57 83-142 2-59 (272)
80 TIGR01549 HAD-SF-IA-v1 haloaci 99.4 8.3E-14 1.8E-18 118.3 5.6 49 272-323 106-154 (154)
81 TIGR01670 YrbI-phosphatas 3-de 99.4 1.2E-12 2.6E-17 111.5 12.2 62 285-356 75-136 (154)
82 PLN02887 hydrolase family prot 99.4 2.8E-12 6E-17 130.0 16.9 65 75-142 300-365 (580)
83 TIGR02726 phenyl_P_delta pheny 99.4 1.8E-12 4E-17 111.7 13.2 60 284-353 80-139 (169)
84 TIGR00099 Cof-subfamily Cof su 99.4 5.7E-13 1.2E-17 122.9 10.0 55 85-142 1-56 (256)
85 TIGR00338 serB phosphoserine p 99.4 1.3E-12 2.8E-17 117.6 11.7 69 283-362 149-219 (219)
86 TIGR01685 MDP-1 magnesium-depe 99.4 1.2E-12 2.5E-17 113.2 10.7 51 284-335 110-162 (174)
87 PRK05446 imidazole glycerol-ph 99.4 3.8E-12 8.2E-17 121.7 14.7 49 283-332 102-150 (354)
88 TIGR01691 enolase-ppase 2,3-di 99.4 2.2E-12 4.7E-17 116.0 10.7 104 226-333 96-199 (220)
89 PRK11133 serB phosphoserine ph 99.4 1.3E-12 2.8E-17 124.0 9.0 71 282-363 244-316 (322)
90 PHA02530 pseT polynucleotide k 99.4 4.4E-12 9.6E-17 119.8 12.4 49 284-333 250-299 (300)
91 TIGR01493 HAD-SF-IA-v2 Haloaci 99.4 1.6E-13 3.5E-18 119.0 1.2 53 269-322 123-175 (175)
92 TIGR01672 AphA HAD superfamily 99.3 8.5E-12 1.8E-16 113.2 11.2 56 273-336 162-217 (237)
93 TIGR02463 MPGP_rel mannosyl-3- 99.3 2.2E-11 4.9E-16 109.8 12.0 67 85-156 1-68 (221)
94 TIGR02471 sucr_syn_bact_C sucr 99.3 6.5E-11 1.4E-15 107.9 14.9 65 85-154 1-65 (236)
95 PRK10187 trehalose-6-phosphate 99.3 7.8E-11 1.7E-15 109.3 15.5 69 284-365 172-243 (266)
96 PF08282 Hydrolase_3: haloacid 99.3 3.4E-13 7.4E-18 122.8 -0.8 217 86-357 1-247 (254)
97 TIGR02461 osmo_MPG_phos mannos 99.3 5.6E-12 1.2E-16 114.1 6.8 55 85-142 1-55 (225)
98 TIGR01485 SPP_plant-cyano sucr 99.3 2.6E-11 5.6E-16 111.5 11.2 199 85-332 3-212 (249)
99 PRK00192 mannosyl-3-phosphogly 99.3 5.6E-11 1.2E-15 110.8 13.5 58 82-142 3-61 (273)
100 TIGR01486 HAD-SF-IIB-MPGP mann 99.3 2.6E-10 5.7E-15 105.2 17.3 64 85-154 1-65 (256)
101 PF09419 PGP_phosphatase: Mito 99.3 2.4E-11 5.1E-16 103.8 8.7 49 81-129 39-91 (168)
102 PRK09552 mtnX 2-hydroxy-3-keto 99.2 1.3E-10 2.7E-15 104.8 11.8 75 282-364 130-214 (219)
103 PRK13582 thrH phosphoserine ph 99.2 1.1E-10 2.4E-15 103.9 10.7 69 287-365 129-198 (205)
104 TIGR01681 HAD-SF-IIIC HAD-supe 99.2 1.2E-10 2.6E-15 96.0 8.5 41 84-124 1-54 (128)
105 PRK11009 aphA acid phosphatase 99.1 1.8E-09 4E-14 97.9 15.2 45 284-336 173-217 (237)
106 TIGR01491 HAD-SF-IB-PSPlk HAD- 99.1 1.9E-10 4.1E-15 101.8 8.5 47 285-332 146-192 (201)
107 TIGR00685 T6PP trehalose-phosp 99.1 3.4E-09 7.3E-14 97.2 16.3 67 288-365 169-242 (244)
108 TIGR01663 PNK-3'Pase polynucle 99.1 7.3E-10 1.6E-14 111.1 12.8 48 81-128 166-226 (526)
109 TIGR01484 HAD-SF-IIB HAD-super 99.1 2.8E-09 6E-14 94.8 15.0 52 85-139 1-54 (204)
110 KOG3109 Haloacid dehalogenase- 99.1 2.6E-10 5.5E-15 99.3 6.7 102 228-333 103-208 (244)
111 PTZ00445 p36-lilke protein; Pr 99.1 5.3E-10 1.2E-14 97.7 8.7 48 284-332 156-207 (219)
112 PF08645 PNK3P: Polynucleotide 99.0 1.3E-09 2.8E-14 93.2 8.9 44 283-326 95-152 (159)
113 PTZ00174 phosphomannomutase; P 99.0 4.8E-09 1E-13 96.4 13.2 54 82-138 4-58 (247)
114 PRK12702 mannosyl-3-phosphogly 99.0 8.5E-09 1.8E-13 95.2 14.0 58 83-143 1-59 (302)
115 TIGR03333 salvage_mtnX 2-hydro 99.0 3.1E-09 6.8E-14 95.4 10.7 74 283-364 127-210 (214)
116 PRK14502 bifunctional mannosyl 99.0 4.1E-08 8.9E-13 100.0 18.4 58 82-142 415-473 (694)
117 smart00577 CPDc catalytic doma 98.9 5.4E-09 1.2E-13 88.4 8.8 44 278-325 94-137 (148)
118 PLN02382 probable sucrose-phos 98.9 9.4E-08 2E-12 94.1 18.3 47 284-331 173-222 (413)
119 TIGR01686 FkbH FkbH-like domai 98.8 1.3E-08 2.8E-13 97.2 9.2 41 284-325 85-125 (320)
120 COG1778 Low specificity phosph 98.8 1.3E-08 2.8E-13 84.3 6.2 39 288-327 85-123 (170)
121 TIGR01489 DKMTPPase-SF 2,3-dik 98.7 1.5E-07 3.2E-12 82.2 12.4 39 282-324 145-183 (188)
122 PRK14501 putative bifunctional 98.7 6.5E-07 1.4E-11 94.6 18.4 67 286-365 657-723 (726)
123 PLN02423 phosphomannomutase 98.6 3.7E-07 7.9E-12 83.8 12.0 53 82-138 5-59 (245)
124 TIGR02137 HSK-PSP phosphoserin 98.6 1.1E-06 2.5E-11 78.1 12.8 69 284-365 129-198 (203)
125 TIGR01488 HAD-SF-IB Haloacid D 98.5 3.2E-07 7E-12 79.3 8.7 38 284-322 140-177 (177)
126 TIGR01490 HAD-SF-IB-hyp1 HAD-s 98.5 1.9E-07 4.1E-12 82.7 6.3 45 283-328 152-196 (202)
127 PF05116 S6PP: Sucrose-6F-phos 98.5 8.7E-07 1.9E-11 81.4 10.6 43 287-331 166-208 (247)
128 PLN02205 alpha,alpha-trehalose 98.4 1.9E-06 4E-11 91.8 12.8 55 82-139 595-654 (854)
129 PLN02580 trehalose-phosphatase 98.4 9E-06 1.9E-10 78.6 16.3 68 286-365 301-376 (384)
130 smart00775 LNS2 LNS2 domain. T 98.4 4.2E-06 9.1E-11 71.4 10.8 45 85-132 1-57 (157)
131 PF00702 Hydrolase: haloacid d 98.4 2.8E-06 6.1E-11 75.5 10.2 39 284-323 177-215 (215)
132 COG0560 SerB Phosphoserine pho 98.4 5.1E-06 1.1E-10 74.4 11.5 44 284-328 142-185 (212)
133 TIGR01533 lipo_e_P4 5'-nucleot 98.3 3.5E-06 7.5E-11 77.8 10.5 61 81-141 73-160 (266)
134 PLN03017 trehalose-phosphatase 98.3 1.6E-05 3.6E-10 76.2 15.1 71 286-365 283-358 (366)
135 PLN02151 trehalose-phosphatase 98.3 3.6E-05 7.8E-10 73.6 15.5 68 287-365 270-344 (354)
136 TIGR01689 EcbF-BcbF capsule bi 98.2 2E-06 4.4E-11 70.2 6.0 43 83-125 1-50 (126)
137 TIGR01684 viral_ppase viral ph 98.2 3.8E-06 8.3E-11 77.6 6.8 69 80-151 123-195 (301)
138 PRK08238 hypothetical protein; 98.0 1.5E-05 3.2E-10 79.9 8.6 95 228-334 75-169 (479)
139 TIGR01544 HAD-SF-IE haloacid d 98.0 5.1E-05 1.1E-09 70.3 11.5 33 289-322 196-230 (277)
140 PF12689 Acid_PPase: Acid Phos 98.0 8.3E-06 1.8E-10 70.1 5.9 50 286-336 108-157 (169)
141 COG4229 Predicted enolase-phos 98.0 4.3E-05 9.4E-10 65.0 9.8 66 283-356 158-224 (229)
142 PRK11590 hypothetical protein; 98.0 5.3E-05 1.2E-09 67.8 10.1 35 292-327 166-200 (211)
143 TIGR01511 ATPase-IB1_Cu copper 97.9 0.00018 3.8E-09 74.0 13.9 42 82-123 384-429 (562)
144 PRK10671 copA copper exporting 97.9 0.00072 1.6E-08 72.8 18.4 115 226-363 651-765 (834)
145 PHA03398 viral phosphatase sup 97.8 4.1E-05 8.9E-10 71.0 7.0 69 80-151 125-197 (303)
146 TIGR01525 ATPase-IB_hvy heavy 97.8 0.00034 7.4E-09 71.9 14.1 57 82-141 363-424 (556)
147 TIGR01512 ATPase-IB2_Cd heavy 97.8 0.00032 7E-09 71.7 12.7 61 294-363 417-479 (536)
148 COG4087 Soluble P-type ATPase 97.7 0.00088 1.9E-08 54.2 11.1 66 292-364 83-148 (152)
149 PF06437 ISN1: IMP-specific 5' 97.7 0.00043 9.4E-09 65.7 10.8 57 82-138 146-205 (408)
150 TIGR01522 ATPase-IIA2_Ca golgi 97.5 0.0019 4.2E-08 69.9 14.5 68 288-364 603-672 (884)
151 KOG1615 Phosphoserine phosphat 97.5 0.00086 1.9E-08 57.9 9.1 32 287-321 160-191 (227)
152 TIGR02251 HIF-SF_euk Dullard-l 97.4 0.00023 4.9E-09 61.0 5.3 36 291-327 101-136 (162)
153 TIGR02244 HAD-IG-Ncltidse HAD 97.4 0.00033 7.2E-09 66.9 6.2 45 291-335 283-328 (343)
154 KOG2961 Predicted hydrolase (H 97.2 0.00099 2.2E-08 55.2 6.3 72 266-337 98-174 (190)
155 PF03767 Acid_phosphat_B: HAD 97.2 0.00062 1.3E-08 61.7 5.5 63 81-143 70-159 (229)
156 TIGR01675 plant-AP plant acid 97.0 0.0011 2.3E-08 59.8 5.6 63 81-143 75-164 (229)
157 TIGR01545 YfhB_g-proteo haloac 97.0 0.0019 4E-08 57.9 6.6 34 293-327 166-199 (210)
158 COG3769 Predicted hydrolase (H 97.0 0.0019 4.1E-08 56.9 6.2 60 81-143 5-64 (274)
159 COG1877 OtsB Trehalose-6-phosp 96.9 0.023 4.9E-07 52.5 13.3 57 82-141 17-80 (266)
160 PRK11033 zntA zinc/cadmium/mer 96.8 0.012 2.5E-07 62.6 11.9 57 82-141 547-607 (741)
161 TIGR01116 ATPase-IIA1_Ca sarco 96.8 0.024 5.1E-07 61.8 14.3 62 292-363 620-683 (917)
162 PF06888 Put_Phosphatase: Puta 96.7 0.08 1.7E-06 48.1 15.0 76 288-364 152-232 (234)
163 PLN03063 alpha,alpha-trehalose 96.7 0.13 2.7E-06 55.2 18.5 56 83-141 507-572 (797)
164 PF08235 LNS2: LNS2 (Lipin/Ned 96.7 0.0025 5.3E-08 54.0 4.5 39 85-123 1-51 (157)
165 TIGR01680 Veg_Stor_Prot vegeta 96.6 0.0046 9.9E-08 56.9 6.1 62 82-143 100-189 (275)
166 PF02358 Trehalose_PPase: Treh 96.6 0.011 2.4E-07 53.6 8.6 64 284-355 163-234 (235)
167 COG4359 Uncharacterized conser 96.5 0.061 1.3E-06 46.3 11.8 67 283-361 144-210 (220)
168 TIGR02468 sucrsPsyn_pln sucros 95.5 0.14 3.1E-06 55.7 11.9 48 284-333 954-1003(1050)
169 COG4996 Predicted phosphatase 95.4 0.26 5.7E-06 40.1 10.1 55 84-141 1-80 (164)
170 PF11019 DUF2608: Protein of u 95.3 0.31 6.6E-06 44.9 11.9 49 284-333 160-212 (252)
171 COG2503 Predicted secreted aci 95.0 0.048 1.1E-06 49.0 5.4 63 82-144 78-168 (274)
172 COG2217 ZntA Cation transport 94.7 0.46 1E-05 50.1 12.8 54 85-141 519-576 (713)
173 TIGR01106 ATPase-IIC_X-K sodiu 94.7 0.46 1E-05 52.4 13.2 44 97-143 566-609 (997)
174 COG4030 Uncharacterized protei 94.0 0.79 1.7E-05 41.0 10.5 42 97-143 81-123 (315)
175 PRK10517 magnesium-transportin 93.7 0.93 2E-05 49.5 12.8 43 97-142 548-590 (902)
176 COG5663 Uncharacterized conser 93.6 0.17 3.7E-06 42.9 5.5 39 294-336 129-167 (194)
177 TIGR01523 ATPase-IID_K-Na pota 93.5 1.6 3.6E-05 48.4 14.6 43 97-142 644-686 (1053)
178 PF12710 HAD: haloacid dehalog 93.4 0.072 1.6E-06 46.2 3.3 21 299-320 172-192 (192)
179 PRK14010 potassium-transportin 93.4 1.6 3.4E-05 46.0 13.5 52 303-364 504-557 (673)
180 TIGR01524 ATPase-IIIB_Mg magne 93.3 1.7 3.7E-05 47.3 14.0 48 92-142 508-555 (867)
181 PRK15122 magnesium-transportin 93.2 1.5 3.3E-05 47.8 13.7 48 92-142 543-590 (903)
182 TIGR01517 ATPase-IIB_Ca plasma 93.2 1.9 4E-05 47.4 14.4 50 92-144 572-621 (941)
183 PF03031 NIF: NLI interacting 93.1 0.048 1E-06 46.2 1.7 39 84-123 1-59 (159)
184 TIGR01497 kdpB K+-transporting 93.1 1.4 2.9E-05 46.4 12.5 57 82-141 425-485 (675)
185 PF06941 NT5C: 5' nucleotidase 92.9 0.14 3.1E-06 44.8 4.4 48 306-363 139-186 (191)
186 COG4850 Uncharacterized conser 92.8 1.4 3.1E-05 41.4 10.7 39 85-123 163-221 (373)
187 PRK01122 potassium-transportin 92.3 2.8 6.2E-05 44.1 13.7 57 82-141 424-484 (679)
188 PF00702 Hydrolase: haloacid d 92.1 0.076 1.7E-06 46.7 1.6 30 83-112 1-32 (215)
189 TIGR01459 HAD-SF-IIA-hyp4 HAD- 91.9 0.39 8.4E-06 43.7 6.1 91 226-324 25-116 (242)
190 TIGR01647 ATPase-IIIA_H plasma 91.7 2.8 6E-05 45.0 13.0 48 92-142 435-482 (755)
191 PF13419 HAD_2: Haloacid dehal 91.4 1.7 3.7E-05 36.3 9.3 88 98-189 76-173 (176)
192 PLN03190 aminophospholipid tra 90.5 6.5 0.00014 44.2 14.9 51 303-362 872-922 (1178)
193 TIGR01652 ATPase-Plipid phosph 90.5 3.9 8.5E-05 45.6 13.3 48 92-142 624-671 (1057)
194 KOG2134 Polynucleotide kinase 90.3 0.32 6.9E-06 46.7 3.8 81 81-161 73-181 (422)
195 PLN03064 alpha,alpha-trehalose 90.2 0.41 8.8E-06 51.9 5.1 56 83-141 591-662 (934)
196 KOG0207 Cation transport ATPas 89.5 14 0.00029 39.8 15.2 52 301-362 784-837 (951)
197 PF05152 DUF705: Protein of un 89.2 1.1 2.5E-05 41.4 6.4 60 80-142 119-182 (297)
198 KOG3120 Predicted haloacid deh 88.0 8 0.00017 34.6 10.6 35 299-334 179-214 (256)
199 KOG2116 Protein involved in pl 87.7 1.1 2.3E-05 46.0 5.7 63 83-145 530-607 (738)
200 TIGR02245 HAD_IIID1 HAD-superf 87.4 2.4 5.1E-05 37.4 7.1 41 82-123 20-68 (195)
201 KOG2961 Predicted hydrolase (H 87.2 2.2 4.8E-05 35.8 6.3 63 82-144 42-113 (190)
202 TIGR01428 HAD_type_II 2-haloal 87.1 5.9 0.00013 34.4 9.7 87 99-189 92-188 (198)
203 TIGR02250 FCP1_euk FCP1-like p 87.1 1.1 2.5E-05 37.9 4.8 22 101-123 60-81 (156)
204 COG5083 SMP2 Uncharacterized p 86.8 1.5 3.3E-05 42.8 5.9 71 82-152 374-459 (580)
205 TIGR01454 AHBA_synth_RP 3-amin 85.3 8.6 0.00019 33.6 9.8 89 97-189 73-171 (205)
206 PF06189 5-nucleotidase: 5'-nu 84.4 1.9 4E-05 39.5 5.0 60 85-144 123-215 (264)
207 PLN02770 haloacid dehalogenase 84.4 8.5 0.00018 35.0 9.6 86 100-189 109-204 (248)
208 TIGR02253 CTE7 HAD superfamily 82.2 11 0.00023 33.3 9.2 88 98-189 93-191 (221)
209 PRK10826 2-deoxyglucose-6-phos 81.9 8.9 0.00019 34.0 8.6 87 99-189 92-188 (222)
210 PLN03243 haloacid dehalogenase 81.8 11 0.00024 34.7 9.3 86 100-189 110-205 (260)
211 TIGR01449 PGP_bact 2-phosphogl 81.6 13 0.00028 32.5 9.5 88 98-189 84-181 (213)
212 PRK13288 pyrophosphatase PpaX; 81.4 13 0.00029 32.7 9.4 87 99-189 82-178 (214)
213 TIGR03351 PhnX-like phosphonat 81.4 13 0.00029 32.7 9.5 88 99-189 87-186 (220)
214 TIGR01657 P-ATPase-V P-type AT 80.8 43 0.00092 37.5 14.9 50 92-144 649-698 (1054)
215 TIGR02009 PGMB-YQAB-SF beta-ph 80.8 11 0.00023 32.2 8.4 48 98-150 87-134 (185)
216 TIGR02252 DREG-2 REG-2-like, H 80.5 13 0.00027 32.4 8.9 85 99-188 105-200 (203)
217 PRK14988 GMP/IMP nucleotidase; 80.5 11 0.00023 33.8 8.5 85 100-188 94-188 (224)
218 PF05761 5_nucleotid: 5' nucle 79.7 2.2 4.7E-05 42.6 4.1 45 291-335 284-329 (448)
219 TIGR01509 HAD-SF-IA-v3 haloaci 79.6 20 0.00043 30.2 9.7 87 98-189 84-180 (183)
220 COG3700 AphA Acid phosphatase 79.4 9.8 0.00021 32.9 7.2 45 284-333 168-214 (237)
221 KOG3189 Phosphomannomutase [Li 79.1 3.1 6.8E-05 36.5 4.3 52 85-143 13-65 (252)
222 PLN02575 haloacid dehalogenase 78.8 16 0.00034 35.8 9.5 87 100-190 217-313 (381)
223 COG3882 FkbH Predicted enzyme 78.6 2.1 4.6E-05 42.5 3.5 50 82-131 221-287 (574)
224 PF04312 DUF460: Protein of un 78.3 6.8 0.00015 32.3 5.8 55 85-141 45-101 (138)
225 PRK11587 putative phosphatase; 78.2 29 0.00063 30.6 10.6 42 99-143 83-124 (218)
226 PF12710 HAD: haloacid dehalog 78.0 2.6 5.5E-05 36.3 3.6 13 86-98 1-13 (192)
227 COG0474 MgtA Cation transport 77.0 23 0.00049 39.0 11.2 46 97-145 545-590 (917)
228 TIGR01491 HAD-SF-IB-PSPlk HAD- 76.7 22 0.00048 30.6 9.3 41 99-142 80-120 (201)
229 PRK09449 dUMP phosphatase; Pro 76.4 21 0.00046 31.5 9.2 88 98-189 94-192 (224)
230 KOG2630 Enolase-phosphatase E- 75.7 11 0.00023 34.0 6.7 51 284-335 179-230 (254)
231 PRK13225 phosphoglycolate phos 75.1 24 0.00052 32.7 9.5 87 99-189 142-235 (273)
232 TIGR01990 bPGM beta-phosphoglu 73.4 27 0.00058 29.6 8.8 86 98-189 86-181 (185)
233 PRK13226 phosphoglycolate phos 72.5 26 0.00056 31.3 8.8 87 99-189 95-191 (229)
234 PRK13222 phosphoglycolate phos 72.2 44 0.00096 29.3 10.3 87 99-189 93-189 (226)
235 COG3700 AphA Acid phosphatase 72.0 18 0.00039 31.3 6.9 38 104-141 119-157 (237)
236 COG5610 Predicted hydrolase (H 71.5 2.3 5.1E-05 41.9 1.8 46 284-329 156-201 (635)
237 COG0546 Gph Predicted phosphat 71.3 29 0.00063 30.8 8.8 48 100-150 90-137 (220)
238 TIGR01422 phosphonatase phosph 71.0 37 0.0008 30.7 9.6 90 97-189 97-197 (253)
239 PLN02177 glycerol-3-phosphate 70.7 2 4.3E-05 43.6 1.1 33 296-331 183-215 (497)
240 TIGR01691 enolase-ppase 2,3-di 69.9 19 0.00042 32.3 7.3 88 98-189 94-192 (220)
241 PRK13478 phosphonoacetaldehyde 66.4 62 0.0013 29.6 10.2 88 99-189 101-199 (267)
242 KOG2470 Similar to IMP-GMP spe 66.2 35 0.00076 32.8 8.2 41 293-333 337-378 (510)
243 TIGR02247 HAD-1A3-hyp Epoxide 66.1 27 0.00059 30.5 7.5 30 98-127 93-122 (211)
244 PLN02940 riboflavin kinase 65.8 42 0.00091 32.8 9.3 86 100-189 94-190 (382)
245 PRK13223 phosphoglycolate phos 65.7 49 0.0011 30.5 9.3 86 100-189 102-197 (272)
246 PF01740 STAS: STAS domain; I 65.1 7.8 0.00017 30.5 3.4 56 82-142 47-102 (117)
247 PF06189 5-nucleotidase: 5'-nu 62.6 56 0.0012 30.1 8.6 69 115-188 36-104 (264)
248 KOG4549 Magnesium-dependent ph 62.3 34 0.00074 27.9 6.3 57 85-143 20-86 (144)
249 PRK09456 ?-D-glucose-1-phospha 59.8 43 0.00092 29.1 7.4 27 99-125 84-110 (199)
250 PLN02954 phosphoserine phospha 59.5 20 0.00044 31.6 5.4 64 76-142 5-124 (224)
251 TIGR01548 HAD-SF-IA-hyp1 haloa 59.3 25 0.00054 30.5 5.8 48 100-150 107-154 (197)
252 TIGR02254 YjjG/YfnB HAD superf 59.2 69 0.0015 27.9 8.8 87 98-189 96-194 (224)
253 KOG0202 Ca2+ transporting ATPa 58.3 1.4E+02 0.003 32.3 11.6 44 98-144 583-626 (972)
254 TIGR01658 EYA-cons_domain eyes 57.5 27 0.00058 31.9 5.6 48 283-333 213-260 (274)
255 TIGR01672 AphA HAD superfamily 56.8 23 0.0005 32.2 5.2 75 69-143 47-159 (237)
256 COG0637 Predicted phosphatase/ 56.2 87 0.0019 27.9 8.9 53 96-151 83-135 (221)
257 COG2216 KdpB High-affinity K+ 55.1 1.9E+02 0.0042 29.6 11.5 178 82-325 298-487 (681)
258 cd07043 STAS_anti-anti-sigma_f 53.0 31 0.00067 25.7 4.8 54 83-142 38-92 (99)
259 TIGR00377 ant_ant_sig anti-ant 52.9 37 0.00081 26.0 5.3 54 82-141 42-96 (108)
260 cd07041 STAS_RsbR_RsbS_like Su 51.6 35 0.00076 26.4 5.0 57 81-143 39-96 (109)
261 COG0560 SerB Phosphoserine pho 50.9 33 0.00072 30.5 5.3 42 99-144 77-119 (212)
262 PLN02499 glycerol-3-phosphate 50.9 8.4 0.00018 38.8 1.5 21 83-103 8-28 (498)
263 cd00733 GlyRS_alpha_core Class 50.7 15 0.00033 33.4 2.9 43 284-326 80-128 (279)
264 KOG0210 P-type ATPase [Inorgan 50.2 15 0.00033 38.4 3.2 52 302-362 781-832 (1051)
265 PLN02811 hydrolase 50.1 98 0.0021 27.3 8.3 28 97-124 76-103 (220)
266 TIGR02886 spore_II_AA anti-sig 49.5 39 0.00084 25.9 4.9 55 82-142 38-93 (106)
267 TIGR00338 serB phosphoserine p 49.3 40 0.00087 29.6 5.6 63 77-142 8-125 (219)
268 PRK09348 glyQ glycyl-tRNA synt 48.5 17 0.00036 33.2 2.9 43 284-326 84-132 (283)
269 PLN02919 haloacid dehalogenase 48.5 1.3E+02 0.0027 33.9 10.3 86 101-190 163-259 (1057)
270 COG1011 Predicted hydrolase (H 48.2 1.4E+02 0.003 26.1 9.0 85 100-189 100-195 (229)
271 TIGR01488 HAD-SF-IB Haloacid D 48.1 46 0.001 27.9 5.6 40 100-142 74-113 (177)
272 PLN02645 phosphoglycolate phos 48.0 47 0.001 31.4 6.1 102 214-328 35-136 (311)
273 KOG0203 Na+/K+ ATPase, alpha s 46.6 1.5E+02 0.0033 32.1 9.7 47 294-352 700-746 (1019)
274 cd06844 STAS Sulphate Transpor 46.4 39 0.00084 25.7 4.4 54 82-141 38-92 (100)
275 TIGR01489 DKMTPPase-SF 2,3-dik 45.7 49 0.0011 27.9 5.4 42 98-142 71-112 (188)
276 TIGR01490 HAD-SF-IB-hyp1 HAD-s 45.5 31 0.00067 29.8 4.2 40 99-142 87-127 (202)
277 TIGR00388 glyQ glycyl-tRNA syn 44.8 21 0.00047 32.7 3.0 42 284-325 81-128 (293)
278 PRK06698 bifunctional 5'-methy 44.5 46 0.00099 33.4 5.7 47 100-149 331-377 (459)
279 TIGR01544 HAD-SF-IE haloacid d 44.3 70 0.0015 29.9 6.4 43 97-142 119-161 (277)
280 COG1167 ARO8 Transcriptional r 43.3 3.2E+02 0.0068 27.4 11.5 62 129-190 138-204 (459)
281 PRK09552 mtnX 2-hydroxy-3-keto 40.0 35 0.00077 30.2 3.7 38 99-139 74-111 (219)
282 TIGR01549 HAD-SF-IA-v1 haloaci 39.2 50 0.0011 27.0 4.3 29 97-125 62-90 (154)
283 KOG3107 Predicted haloacid deh 38.8 61 0.0013 31.5 5.1 42 288-331 411-452 (468)
284 PRK11133 serB phosphoserine ph 38.6 2.1E+02 0.0045 27.3 8.9 40 99-142 181-221 (322)
285 TIGR02990 ectoine_eutA ectoine 36.6 2.4E+02 0.0051 25.7 8.5 40 212-255 180-219 (239)
286 PRK10671 copA copper exporting 36.0 1.1E+02 0.0023 33.4 7.2 102 82-189 629-735 (834)
287 PRK10725 fructose-1-P/6-phosph 35.7 2E+02 0.0044 24.2 7.8 87 97-189 86-182 (188)
288 KOG0207 Cation transport ATPas 35.7 1.1E+02 0.0025 33.2 7.0 59 81-142 701-763 (951)
289 COG1366 SpoIIAA Anti-anti-sigm 34.9 76 0.0017 25.0 4.6 58 81-143 42-99 (117)
290 PF06117 DUF957: Enterobacteri 34.7 13 0.00028 26.1 -0.0 29 84-112 25-53 (65)
291 PLN02779 haloacid dehalogenase 34.5 43 0.00093 31.2 3.5 37 100-139 145-181 (286)
292 PF02571 CbiJ: Precorrin-6x re 33.6 69 0.0015 29.3 4.6 61 289-363 184-248 (249)
293 PF06014 DUF910: Bacterial pro 33.4 28 0.0006 24.6 1.5 25 291-320 7-31 (62)
294 COG0752 GlyQ Glycyl-tRNA synth 33.1 30 0.00066 31.4 2.0 41 284-324 85-131 (298)
295 TIGR02137 HSK-PSP phosphoserin 32.6 99 0.0021 27.2 5.3 40 99-142 68-107 (203)
296 TIGR01993 Pyr-5-nucltdase pyri 32.3 2E+02 0.0044 24.2 7.2 84 99-189 84-181 (184)
297 PRK11590 hypothetical protein; 32.2 89 0.0019 27.5 5.0 39 99-141 95-135 (211)
298 PF13756 Stimulus_sens_1: Stim 31.9 33 0.00071 27.3 1.9 21 81-101 17-38 (112)
299 KOG2914 Predicted haloacid-hal 31.6 88 0.0019 28.2 4.8 40 94-133 87-126 (222)
300 COG4996 Predicted phosphatase 31.5 93 0.002 25.7 4.4 75 227-312 43-126 (164)
301 TIGR01545 YfhB_g-proteo haloac 31.1 90 0.002 27.6 4.8 38 99-140 94-133 (210)
302 TIGR00715 precor6x_red precorr 30.9 84 0.0018 28.9 4.7 59 292-364 190-253 (256)
303 PF12694 MoCo_carrier: Putativ 30.4 35 0.00075 28.5 1.8 36 87-122 61-97 (145)
304 PRK13582 thrH phosphoserine ph 29.7 1.2E+02 0.0026 26.1 5.3 38 101-142 70-107 (205)
305 PRK10563 6-phosphogluconate ph 29.7 3.2E+02 0.007 23.7 8.3 84 99-189 88-182 (221)
306 PRK10494 hypothetical protein; 29.3 1.8E+02 0.0038 26.8 6.5 24 228-251 107-130 (259)
307 cd01766 Ufm1 Urm1-like ubiquit 28.3 74 0.0016 23.2 2.9 39 284-323 25-63 (82)
308 KOG4166 Thiamine pyrophosphate 28.1 1.4E+02 0.003 29.7 5.7 38 82-124 540-578 (675)
309 TIGR03333 salvage_mtnX 2-hydro 26.9 1.3E+02 0.0028 26.4 5.1 40 98-140 69-108 (214)
310 PF06941 NT5C: 5' nucleotidase 26.4 56 0.0012 28.2 2.6 14 86-99 5-18 (191)
311 COG2897 SseA Rhodanese-related 25.9 1.2E+02 0.0025 28.5 4.7 49 284-333 71-125 (285)
312 PF01282 Ribosomal_S24e: Ribos 25.4 86 0.0019 23.5 3.1 26 284-309 9-37 (84)
313 PRK11660 putative transporter; 24.7 1.4E+02 0.003 30.9 5.5 70 81-157 489-561 (568)
314 PRK10748 flavin mononucleotide 24.7 3.3E+02 0.0071 24.3 7.4 79 101-189 115-204 (238)
315 TIGR02244 HAD-IG-Ncltidse HAD 24.4 85 0.0018 30.3 3.6 37 100-139 185-221 (343)
316 KOG2469 IMP-GMP specific 5'-nu 23.8 37 0.00079 33.3 1.0 56 283-338 285-341 (424)
317 cd06287 PBP1_LacI_like_8 Ligan 23.6 5.4E+02 0.012 23.1 14.4 22 291-312 193-216 (269)
318 cd01445 TST_Repeats Thiosulfat 22.8 2.8E+02 0.006 22.6 6.0 50 284-333 76-132 (138)
319 PRK05752 uroporphyrinogen-III 22.7 5.7E+02 0.012 23.0 12.9 29 303-334 211-239 (255)
320 PRK08508 biotin synthase; Prov 22.4 3.2E+02 0.0069 25.3 7.0 40 103-143 76-115 (279)
321 PF02091 tRNA-synt_2e: Glycyl- 22.3 22 0.00047 32.6 -0.8 41 284-324 79-125 (284)
322 COG0548 ArgB Acetylglutamate k 21.2 2.3E+02 0.0051 26.2 5.6 58 83-144 2-59 (265)
323 PRK08238 hypothetical protein; 20.2 1.9E+02 0.0042 29.2 5.3 38 101-141 74-111 (479)
324 TIGR01494 ATPase_P-type ATPase 20.1 1.7E+02 0.0037 29.5 5.1 63 287-365 391-453 (499)
325 COG2433 Uncharacterized conser 20.1 5.6E+02 0.012 26.7 8.4 54 85-141 257-313 (652)
No 1
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.1e-46 Score=337.82 Aligned_cols=288 Identities=56% Similarity=0.909 Sum_probs=261.3
Q ss_pred ccHHHHhccCcEEEEecceeEEeCCEeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCC-CCcCceeccH
Q 017785 74 KNADELIDSVETFIFDCDGVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT-VTEEEIFASS 152 (366)
Q Consensus 74 ~~~~~~~~~ik~viFDiDGTL~d~~~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~-~~~~~i~~~~ 152 (366)
+..+++++.++.|+||+|||||.++..+|++.++++.|++.|..+.|+|||+++++.++.++++++|+. +..++++.+.
T Consensus 13 ~~~~e~l~~~DtfifDcDGVlW~g~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~~v~e~~i~ssa 92 (306)
T KOG2882|consen 13 EEARELLDSFDTFIFDCDGVLWLGEKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFNSVKEENIFSSA 92 (306)
T ss_pred HHHHHHHhhcCEEEEcCCcceeecCCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCccccCcccccChH
Confidence 456778999999999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred HHHHHHHHhcCCCCCCeEEEecccchHHHHHHcCCeeeCCCCCCCcccccCCCcc-cCCCCCccEEEEEccCCCCHHhHH
Q 017785 153 FAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFL-MEHDKDVGAVVVGFDRYFNYYKVQ 231 (366)
Q Consensus 153 ~~~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~y~~l~ 231 (366)
.+.+.|+++.. +.++++|++|.+++.+.|+++|++...++++....--..+.-+ ...+++++||++++|.-+.|.++.
T Consensus 93 ~~~a~ylk~~~-~~~k~Vyvig~~gi~~eL~~aG~~~~g~~~~~~~~~~~~~~~~~~~~d~~VgAVvvg~D~hfsy~KL~ 171 (306)
T KOG2882|consen 93 YAIADYLKKRK-PFGKKVYVIGEEGIREELDEAGFEYFGGGPDGKDTDGAKSFVLSIGLDPDVGAVVVGYDEHFSYPKLM 171 (306)
T ss_pred HHHHHHHHHhC-cCCCeEEEecchhhhHHHHHcCceeecCCCCcccccccccchhhcCCCCCCCEEEEecccccCHHHHH
Confidence 99999999887 5678999999999999999999999887776554411111111 223677999999999999999999
Q ss_pred HHHHHHHcCCCcEEEEecCCceeecCCCccccCCCccceeeeeeecCcccccCCCcHHHHHHHHHHcCCCCCcEEEEcCC
Q 017785 232 YGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDR 311 (366)
Q Consensus 232 ~a~~~l~~~~g~~~i~sn~d~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~gKP~p~~~~~a~~~lgv~~~~vl~VGDs 311 (366)
.++..|+ ++++.|++||.|.++|......++|.|+++.+++.++++++.+.|||++.++.++.++++++|++|+||||+
T Consensus 172 kA~~yLq-nP~clflatn~D~~~p~~~~~~ipG~G~~v~av~~~t~R~P~v~GKP~~~m~~~l~~~~~i~psRt~mvGDR 250 (306)
T KOG2882|consen 172 KALNYLQ-NPGCLFLATNRDATTPPTPGVEIPGAGSFVAAVKFATGRQPIVLGKPSTFMFEYLLEKFNIDPSRTCMVGDR 250 (306)
T ss_pred HHHHHhC-CCCcEEEeccCccccCCCCCeeccCCccHHHHHHHHhcCCCeecCCCCHHHHHHHHHHcCCCcceEEEEccc
Confidence 9998887 699999999999999888889999999999999999999999999999999999999999999999999999
Q ss_pred chhhHHHHHHcCCcEEEEecCCCCcccccCC--CCCCCCCEEECChhHHHHHHH
Q 017785 312 LDTDILFGQNGGCKTLLVLSGVTSLSMLQSP--NNSIQPDFYTNKISDFLSLKA 363 (366)
Q Consensus 312 ~~~Di~~a~~aG~~tv~V~~G~~~~~~l~~~--~~~~~pd~v~~sl~~l~~~~~ 363 (366)
+++||..|+++|++|+||.||++..++.+.. +....|||+++++.++.+.+.
T Consensus 251 L~TDIlFG~~~G~~TLLvltGv~~led~~~~~~~~~~~PDyy~~~l~d~~~~~~ 304 (306)
T KOG2882|consen 251 LDTDILFGKNCGFKTLLVLSGVTTLEDILEAQGDNKMVPDYYADSLGDLLPLLN 304 (306)
T ss_pred chhhhhHhhccCcceEEEecCcCcHHHHHhcccccCCCCchHHhhHHHHhhhcc
Confidence 9999999999999999999999998887764 566789999999999987653
No 2
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.2e-43 Score=323.70 Aligned_cols=264 Identities=39% Similarity=0.641 Sum_probs=240.8
Q ss_pred HHhccCcEEEEecceeEEeCCEeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHh-cCCCCCcCceeccHHHHH
Q 017785 78 ELIDSVETFIFDCDGVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFET-LGLTVTEEEIFASSFAAA 156 (366)
Q Consensus 78 ~~~~~ik~viFDiDGTL~d~~~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~-lG~~~~~~~i~~~~~~~~ 156 (366)
+.+++|++++||+||||+++.+.+|++.++|+.|+++|+++.|+|||+++++..+.++|+. ++++.+++++++|+.+..
T Consensus 3 ~~~~~y~~~l~DlDGvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~~~~~i~TS~~at~ 82 (269)
T COG0647 3 DVMDKYDGFLFDLDGVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDVTPDDIVTSGDATA 82 (269)
T ss_pred chhhhcCEEEEcCcCceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCCCHHHeecHHHHHH
Confidence 3567899999999999999999999999999999999999999999999999999999988 788899999999999999
Q ss_pred HHHHhcCCCCCCeEEEecccchHHHHHHcCCeeeCCCCCCCcccccCCCcccCCCCCccEEEEEccCCCCHHhHHHHHHH
Q 017785 157 AYLKSIDFPKDKKVYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYKVQYGTLC 236 (366)
Q Consensus 157 ~~l~~~~~~~~~~~~~~g~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~y~~l~~a~~~ 236 (366)
+|+.+... .+++|++|.+++.+.++..|+.+..... +..+++|+++.|+...|+++.+++..
T Consensus 83 ~~l~~~~~--~~kv~viG~~~l~~~l~~~G~~~~~~~~----------------~~~~d~Vv~g~d~~~~~e~l~~a~~~ 144 (269)
T COG0647 83 DYLAKQKP--GKKVYVIGEEGLKEELEGAGFELVDEEE----------------PARVDAVVVGLDRTLTYEKLAEALLA 144 (269)
T ss_pred HHHHhhCC--CCEEEEECCcchHHHHHhCCcEEeccCC----------------CCcccEEEEecCCCCCHHHHHHHHHH
Confidence 99987632 3789999999999999999998853211 12368999999999999999999999
Q ss_pred HHcCCCcEEEEecCCceeecCCCccccCCCccceeeeeeecCcccccCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhH
Q 017785 237 IRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDI 316 (366)
Q Consensus 237 l~~~~g~~~i~sn~d~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~gKP~p~~~~~a~~~lgv~~~~vl~VGDs~~~Di 316 (366)
+++ +.++|+||+|..+|...+ ..++.|.+...++.++|.++.+.|||++.+|+.+++.++.++++|+||||++++||
T Consensus 145 i~~--g~~fI~tNpD~~~p~~~g-~~pgaGai~~~~~~~tg~~~~~~GKP~~~i~~~al~~~~~~~~~~~mVGD~~~TDI 221 (269)
T COG0647 145 IAA--GAPFIATNPDLTVPTERG-LRPGAGAIAALLEQATGREPTVIGKPSPAIYEAALEKLGLDRSEVLMVGDRLDTDI 221 (269)
T ss_pred HHc--CCcEEEeCCCccccCCCC-CccCcHHHHHHHHHhhCCcccccCCCCHHHHHHHHHHhCCCcccEEEEcCCchhhH
Confidence 985 699999999999987777 89999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCcEEEEecCCCCcccccCCCCCCCCCEEECChhHHHHHHHh
Q 017785 317 LFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKAA 364 (366)
Q Consensus 317 ~~a~~aG~~tv~V~~G~~~~~~l~~~~~~~~pd~v~~sl~~l~~~~~~ 364 (366)
.+|+++||.|++|+||+++.+++.. ....|+|+++|+.++..++.+
T Consensus 222 ~~a~~~G~~t~LV~TGv~~~~~~~~--~~~~p~~v~~sl~~~~~~~~~ 267 (269)
T COG0647 222 LGAKAAGLDTLLVLTGVSSAEDLDR--AEVKPTYVVDSLAELITALKE 267 (269)
T ss_pred HHHHHcCCCEEEEccCCCChhhhhh--hccCCcchHhhHHHHHhhhhc
Confidence 9999999999999999998887664 357899999999999887654
No 3
>PLN02645 phosphoglycolate phosphatase
Probab=100.00 E-value=5e-43 Score=331.84 Aligned_cols=298 Identities=89% Similarity=1.380 Sum_probs=257.1
Q ss_pred ccCCCccHHHHhccCcEEEEecceeEEeCCEeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCCCCcCce
Q 017785 69 SAQPLKNADELIDSVETFIFDCDGVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEI 148 (366)
Q Consensus 69 ~~~~~~~~~~~~~~ik~viFDiDGTL~d~~~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~~~~~~i 148 (366)
...+.+...++++.+|+|+||+||||+++..++|++.++|++|+++|++++++||++.+++.++.++|+.+|++...+++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~D~DGtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~~~~~I 93 (311)
T PLN02645 14 QLLTLENADELIDSVETFIFDCDGVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNVTEEEI 93 (311)
T ss_pred ccCCHHHHHHHHHhCCEEEEeCcCCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCCChhhE
Confidence 34455677888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccHHHHHHHHHhcCCCCCCeEEEecccchHHHHHHcCCeeeCCCCCCCcccccCCCcccCCCCCccEEEEEccCCCCHH
Q 017785 149 FASSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYY 228 (366)
Q Consensus 149 ~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~y~ 228 (366)
+++......|+....+..+++++++|...+.+.+++.|+....+..+........+....+.++++++|+++.++.++|+
T Consensus 94 ~ts~~~~~~~l~~~~~~~~~~V~viG~~~~~~~l~~~Gi~~~~g~~~~~~~~~~~~~~~~~~~~~i~aVvvg~d~~~~~~ 173 (311)
T PLN02645 94 FSSSFAAAAYLKSINFPKDKKVYVIGEEGILEELELAGFQYLGGPEDGDKKIELKPGFLMEHDKDVGAVVVGFDRYINYY 173 (311)
T ss_pred eehHHHHHHHHHhhccCCCCEEEEEcCHHHHHHHHHCCCEEecCccccccccccccccccccCCCCCEEEEecCCCCCHH
Confidence 99999999999887655556799999999999999999988665443322222223333334567899999999999999
Q ss_pred hHHHHHHHHHcCCCcEEEEecCCceeecCCCccccCCCccceeeeeeecCcccccCCCcHHHHHHHHHHcCCCCCcEEEE
Q 017785 229 KVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMV 308 (366)
Q Consensus 229 ~l~~a~~~l~~~~g~~~i~sn~d~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~gKP~p~~~~~a~~~lgv~~~~vl~V 308 (366)
+++.+...++.+++..+|+||.|..++.......++.+.++.++..+.+.++...|||+|.+|..+++++++++++++||
T Consensus 174 ~l~~a~~~l~~~~g~~~i~tn~d~~~~~~~~~~~~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~a~~~~~~~~~~~~~V 253 (311)
T PLN02645 174 KIQYATLCIRENPGCLFIATNRDAVTHLTDAQEWAGAGSMVGAIKGSTEREPLVVGKPSTFMMDYLANKFGIEKSQICMV 253 (311)
T ss_pred HHHHHHHHHhcCCCCEEEEeCCCCCCCCCCCCCccchHHHHHHHHHHhCCCcccCCCChHHHHHHHHHHcCCCcccEEEE
Confidence 99999999987679999999999976555556778888899999999998888889999999999999999999999999
Q ss_pred cCCchhhHHHHHHcCCcEEEEecCCCCcccccCCCCCCCCCEEECChhHHHHHHHhhC
Q 017785 309 GDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKAAAV 366 (366)
Q Consensus 309 GDs~~~Di~~a~~aG~~tv~V~~G~~~~~~l~~~~~~~~pd~v~~sl~~l~~~~~~~~ 366 (366)
||++.+||++|+++|+++++|.+|.+..+++++.+....||++++++.++.++++.++
T Consensus 254 GD~~~~Di~~A~~aG~~~ilV~~G~~~~~~~~~~~~~~~pd~~~~~~~~l~~~~~~~~ 311 (311)
T PLN02645 254 GDRLDTDILFGQNGGCKTLLVLSGVTSESMLLSPENKIQPDFYTSKISDFLTLKAATV 311 (311)
T ss_pred cCCcHHHHHHHHHcCCCEEEEcCCCCCHHHHHhccCCCCCCEEECCHHHHHHHhhcCC
Confidence 9998799999999999999999999887776432234679999999999999887764
No 4
>PRK10444 UMP phosphatase; Provisional
Probab=100.00 E-value=5.1e-40 Score=300.89 Aligned_cols=245 Identities=31% Similarity=0.539 Sum_probs=223.9
Q ss_pred CcEEEEecceeEEeCCEeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCCCCcCceeccHHHHHHHHHhc
Q 017785 83 VETFIFDCDGVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLKSI 162 (366)
Q Consensus 83 ik~viFDiDGTL~d~~~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~~~~~~i~~~~~~~~~~l~~~ 162 (366)
||+|+||+||||+++.+++|++.++++.|+++|++++++||++.++...+.++|+.+|+++.+++++++..++.+|+.+.
T Consensus 1 ~~~v~~DlDGtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~~~~~~i~ts~~~~~~~L~~~ 80 (248)
T PRK10444 1 IKNVICDIDGVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPDSVFYTSAMATADFLRRQ 80 (248)
T ss_pred CcEEEEeCCCceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCHhhEecHHHHHHHHHHhC
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred CCCCCCeEEEecccchHHHHHHcCCeeeCCCCCCCcccccCCCcccCCCCCccEEEEEccCCCCHHhHHHHHHHHHcCCC
Q 017785 163 DFPKDKKVYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYKVQYGTLCIRENPG 242 (366)
Q Consensus 163 ~~~~~~~~~~~g~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~y~~l~~a~~~l~~~~g 242 (366)
. +++++++|..++.+.+...|+.+. ++++++|+++.+..++|+++..+...++ ++
T Consensus 81 ~---~~~v~~~g~~~l~~~l~~~g~~~~--------------------~~~~~~Vvvg~~~~~~~~~l~~a~~~l~--~g 135 (248)
T PRK10444 81 E---GKKAYVIGEGALIHELYKAGFTIT--------------------DINPDFVIVGETRSYNWDMMHKAAYFVA--NG 135 (248)
T ss_pred C---CCEEEEEcCHHHHHHHHHCcCEec--------------------CCCCCEEEEeCCCCCCHHHHHHHHHHHH--CC
Confidence 2 467999999999999999998762 3457899999999999999999998886 58
Q ss_pred cEEEEecCCceeecCCCccccCCCccceeeeeeecCcccccCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHc
Q 017785 243 CLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNG 322 (366)
Q Consensus 243 ~~~i~sn~d~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~gKP~p~~~~~a~~~lgv~~~~vl~VGDs~~~Di~~a~~a 322 (366)
..++++|+|...+ ...++.|.+..+++.+.+.++...|||+|++|+.+++++++++++|+||||++++||++|+++
T Consensus 136 ~~~i~~n~D~~~~----g~~~~~G~~~~~l~~~~g~~~~~~gKP~~~~~~~~~~~~~~~~~~~v~IGD~~~tDi~~A~~~ 211 (248)
T PRK10444 136 ARFIATNPDTHGR----GFYPACGALCAGIEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQA 211 (248)
T ss_pred CEEEEECCCCCCC----CCcCcHHHHHHHHHHHhCCCccccCCCCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHc
Confidence 9999999999543 367888999999999999999889999999999999999999999999999987999999999
Q ss_pred CCcEEEEecCCCCcccccCCCCCCCCCEEECChhHH
Q 017785 323 GCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDF 358 (366)
Q Consensus 323 G~~tv~V~~G~~~~~~l~~~~~~~~pd~v~~sl~~l 358 (366)
|+++++|.+|.+..+++++ ....|||+++|+.++
T Consensus 212 G~~~vlV~~G~~~~~~l~~--~~~~pd~~~~sl~el 245 (248)
T PRK10444 212 GLETILVLSGVSTLDDIDS--MPFRPSWIYPSVADI 245 (248)
T ss_pred CCCEEEECCCCCCHHHHhc--CCCCCCEEECCHHHh
Confidence 9999999999998887753 346899999999997
No 5
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=100.00 E-value=5.9e-40 Score=306.67 Aligned_cols=275 Identities=44% Similarity=0.780 Sum_probs=232.4
Q ss_pred cCcEEEEecceeEEeCCEeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCCCCcCceeccHHHHHHHHHh
Q 017785 82 SVETFIFDCDGVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLKS 161 (366)
Q Consensus 82 ~ik~viFDiDGTL~d~~~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~~~~~~i~~~~~~~~~~l~~ 161 (366)
+|++|+||+||||+++.+.+|++.++|++|+++|+++.++|||+.+++.++..+++.+|++...++++++..++.+|+.+
T Consensus 1 ~~~~~~~D~DGtl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~~~~i~ts~~~~~~~l~~ 80 (279)
T TIGR01452 1 RAQGFIFDCDGVLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGLAEQLFSSALCAARLLRQ 80 (279)
T ss_pred CccEEEEeCCCceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEecHHHHHHHHHHh
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred cCCCCCCeEEEecccchHHHHHHcCCeeeCCCCCCCcccccCCCcccCCCCCccEEEEEccCCCCHHhHHHHHHHHHcCC
Q 017785 162 IDFPKDKKVYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYKVQYGTLCIRENP 241 (366)
Q Consensus 162 ~~~~~~~~~~~~g~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~y~~l~~a~~~l~~~~ 241 (366)
...+ +++++++|...+.+.+++.|+.+...+.+........+......++++++|+++.+..++|+.+.+++..++. +
T Consensus 81 ~~~~-~~~v~~iG~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Vvv~~d~~~~y~~i~~~l~~L~~-~ 158 (279)
T TIGR01452 81 PPDA-PKAVYVIGEEGLRAELDAAGIRLAGDPSAGDGAAPRGSGAFMKLEENVGAVVVGYDEHFSYAKLREACAHLRE-P 158 (279)
T ss_pred hCcC-CCEEEEEcCHHHHHHHHHCCCEEecCcccccccchhhcccccccCCCCCEEEEecCCCCCHHHHHHHHHHHhc-C
Confidence 5332 4679999999999999999998865544321111111111122345789999999999999999999999975 4
Q ss_pred CcEEEEecCCceeecCCCccccCCCccceeeeeeecCcccccCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHH
Q 017785 242 GCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQN 321 (366)
Q Consensus 242 g~~~i~sn~d~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~gKP~p~~~~~a~~~lgv~~~~vl~VGDs~~~Di~~a~~ 321 (366)
+..+++||.+..++......+++.+.++.++..+++.+....|||+|.+|+++++++|+++++|+||||++++||++|++
T Consensus 159 g~~~i~Tn~d~~~~~~~~~~~~~~g~~~~~i~~~~g~~~~~~gKP~p~~~~~~~~~~~~~~~~~lmIGD~~~tDI~~A~~ 238 (279)
T TIGR01452 159 GCLFVATNRDPWHPLSDGSRTPGTGSLVAAIETASGRQPLVVGKPSPYMFECITENFSIDPARTLMVGDRLETDILFGHR 238 (279)
T ss_pred CCEEEEeCCCCCCCCcCCCcccChHHHHHHHHHHhCCceeccCCCCHHHHHHHHHHhCCChhhEEEECCChHHHHHHHHH
Confidence 67899999998766444455677777888888888888888999999999999999999999999999997799999999
Q ss_pred cCCcEEEEecCCCCcccccCC----CCCCCCCEEECChhHH
Q 017785 322 GGCKTLLVLSGVTSLSMLQSP----NNSIQPDFYTNKISDF 358 (366)
Q Consensus 322 aG~~tv~V~~G~~~~~~l~~~----~~~~~pd~v~~sl~~l 358 (366)
+||++++|++|.+..+++++. +....|||+++++.|+
T Consensus 239 aGi~si~V~~G~~~~~~l~~~~~~~~~~~~Pd~~~~~l~~l 279 (279)
T TIGR01452 239 CGMTTVLVLSGVSRLEEAQEYLAAGQHDLVPDYVVESLADL 279 (279)
T ss_pred cCCcEEEECCCCCCHHHHHhhhcccccCCCCCEEecccccC
Confidence 999999999999988776531 2346899999999874
No 6
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=100.00 E-value=1.4e-39 Score=299.07 Aligned_cols=249 Identities=31% Similarity=0.525 Sum_probs=225.0
Q ss_pred CcEEEEecceeEEeCCEeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCCCCcCceeccHHHHHHHHHhc
Q 017785 83 VETFIFDCDGVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLKSI 162 (366)
Q Consensus 83 ik~viFDiDGTL~d~~~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~~~~~~i~~~~~~~~~~l~~~ 162 (366)
+|+|+||+||||+++.+.+|++.++|++++++|++++++|||++|++..+.++++.+|+++.++++++++.++.+|+.+.
T Consensus 1 ~~~~~~D~DGtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~~~~iit~~~~~~~~l~~~ 80 (249)
T TIGR01457 1 YKGYLIDLDGTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPATLETVFTASMATADYMNDL 80 (249)
T ss_pred CCEEEEeCCCceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEeeHHHHHHHHHHhc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred CCCCCCeEEEecccchHHHHHHcCCeeeCCCCCCCcccccCCCcccCCCCCccEEEEEccCCCCHHhHHHHHHHHHcCCC
Q 017785 163 DFPKDKKVYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYKVQYGTLCIRENPG 242 (366)
Q Consensus 163 ~~~~~~~~~~~g~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~y~~l~~a~~~l~~~~g 242 (366)
. .+++++++|.+++.+.+...|+.+. .+++++|+++.++.++|+++..++..++ ++
T Consensus 81 ~--~~~~v~~lg~~~l~~~l~~~g~~~~--------------------~~~~~~Vvvg~~~~~~y~~l~~a~~~l~--~g 136 (249)
T TIGR01457 81 K--LEKTVYVIGEEGLKEAIKEAGYVED--------------------KEKPDYVVVGLDRQIDYEKFATATLAIR--KG 136 (249)
T ss_pred C--CCCEEEEEcChhHHHHHHHcCCEec--------------------CCCCCEEEEeCCCCCCHHHHHHHHHHHH--CC
Confidence 4 2477999999999999999998752 3457899999999999999999998885 48
Q ss_pred cEEEEecCCceeecCCCccccCCCccceeeeeeecCcccccCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHc
Q 017785 243 CLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNG 322 (366)
Q Consensus 243 ~~~i~sn~d~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~gKP~p~~~~~a~~~lgv~~~~vl~VGDs~~~Di~~a~~a 322 (366)
..++++|+|..++.... ..++.+++..+++.+++.+....|||+|.+|+.+++++++++++++||||++.+||.+|+++
T Consensus 137 ~~~i~tN~D~~~~~~~~-~~~~~G~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~a~~~ 215 (249)
T TIGR01457 137 AHFIGTNGDLAIPTERG-LLPGNGSLITVLEVATGVKPVYIGKPNAIIMEKAVEHLGTEREETLMVGDNYLTDIRAGIDA 215 (249)
T ss_pred CeEEEECCCCCCCCCCC-CCCCcHHHHHHHHHHhCCCccccCCChHHHHHHHHHHcCCCcccEEEECCCchhhHHHHHHc
Confidence 88999999999875443 57789999999999999999889999999999999999999999999999976899999999
Q ss_pred CCcEEEEecCCCCcccccCCCCCCCCCEEECChhHH
Q 017785 323 GCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDF 358 (366)
Q Consensus 323 G~~tv~V~~G~~~~~~l~~~~~~~~pd~v~~sl~~l 358 (366)
||++++|.+|.+..+.++. ....||++++++.|+
T Consensus 216 G~~~v~v~~G~~~~~~~~~--~~~~pd~~v~~l~~~ 249 (249)
T TIGR01457 216 GIDTLLVHTGVTKAEEVAG--LPIAPTHVVSSLAEW 249 (249)
T ss_pred CCcEEEEcCCCCCHHHHhc--CCCCCCEEeCChhhC
Confidence 9999999999987776643 235799999999874
No 7
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=100.00 E-value=3.1e-36 Score=277.99 Aligned_cols=249 Identities=23% Similarity=0.363 Sum_probs=214.3
Q ss_pred CcEEEEecceeEEeCCE----eCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCCCCcCceeccHHHHHHH
Q 017785 83 VETFIFDCDGVIWKGDK----LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAY 158 (366)
Q Consensus 83 ik~viFDiDGTL~d~~~----~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~~~~~~i~~~~~~~~~~ 158 (366)
+|+|+||+||||+++.+ ++|++.++|++++++|+++.++||++.+++.++.++++.+|+++.+++++++..++.+|
T Consensus 1 ~k~i~~D~DGtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~~~~~i~ts~~~~~~~ 80 (257)
T TIGR01458 1 VKGVLLDISGVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFDISEDEVFTPAPAARQL 80 (257)
T ss_pred CCEEEEeCCCeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCCCCHHHeEcHHHHHHHH
Confidence 57999999999999887 99999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCCCeEEEecccchHHHHHHcCCeeeCCCCCCCcccccCCCcccCCCCCccEEEEEccC-CCCHHhHHHHHHHH
Q 017785 159 LKSIDFPKDKKVYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDR-YFNYYKVQYGTLCI 237 (366)
Q Consensus 159 l~~~~~~~~~~~~~~g~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~y~~l~~a~~~l 237 (366)
+.+.+ .+++++|.+++.+.+. |+. .+++++|+++.+. .+.|+++.+++..+
T Consensus 81 l~~~~----~~~~~~g~~~~~~~~~--~~~----------------------~~~~~~Vv~g~~~~~~~y~~l~~a~~~L 132 (257)
T TIGR01458 81 LEEKQ----LRPMLLVDDRVLPDFD--GID----------------------TSDPNCVVMGLAPEHFSYQILNQAFRLL 132 (257)
T ss_pred HHhcC----CCeEEEECccHHHHhc--cCC----------------------CCCCCEEEEecccCccCHHHHHHHHHHH
Confidence 98753 3578888887777764 321 1346799999865 68999999999999
Q ss_pred HcCCCcEEEEecCCceeecCCCccccCCCccceeeeeeecCcccccCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHH
Q 017785 238 RENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDIL 317 (366)
Q Consensus 238 ~~~~g~~~i~sn~d~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~gKP~p~~~~~a~~~lgv~~~~vl~VGDs~~~Di~ 317 (366)
+......++++|.+..++.... ..++.+.+++.+..+.+.++...|||+|.+|+.+++++|++|++|+||||++.+||.
T Consensus 133 ~~~~~~~~iatn~~~~~~~~~~-~~~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~ 211 (257)
T TIGR01458 133 LDGAKPLLIAIGKGRYYKRKDG-LALDVGPFVTALEYATDTKATVVGKPSKTFFLEALRATGCEPEEAVMIGDDCRDDVG 211 (257)
T ss_pred HcCCCCEEEEeCCCCCCcCCCC-CCCCchHHHHHHHHHhCCCceeecCCCHHHHHHHHHHhCCChhhEEEECCCcHHHHH
Confidence 8755667899999987764444 466888888888888888888889999999999999999999999999999769999
Q ss_pred HHHHcCCcEEEEecCCCCcccccCCCCCCCCCEEECChhHHHHHH
Q 017785 318 FGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLK 362 (366)
Q Consensus 318 ~a~~aG~~tv~V~~G~~~~~~l~~~~~~~~pd~v~~sl~~l~~~~ 362 (366)
+|+++||++++|.+|....+..+. ....||++++++.|+.+++
T Consensus 212 ~a~~~G~~~i~v~~G~~~~~~~~~--~~~~pd~~~~sl~el~~~l 254 (257)
T TIGR01458 212 GAQDCGMRGIQVRTGKYRPSDEEK--INVPPDLTCDSLPHAVDLI 254 (257)
T ss_pred HHHHcCCeEEEECCCCCChHHhcc--cCCCCCEEECCHHHHHHHH
Confidence 999999999999999765433221 2367999999999998865
No 8
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=100.00 E-value=4.8e-36 Score=285.24 Aligned_cols=270 Identities=22% Similarity=0.262 Sum_probs=219.7
Q ss_pred EEEEecceeEEeCCEeCCCHHHHHHHHHHC----CCeEEEEeCCCCCCHHHHHHHH-HhcCCCCCcCceeccHHHHHHHH
Q 017785 85 TFIFDCDGVIWKGDKLIDGVPETLDMLRSK----GKRLVFVTNNSTKSRKQYGKKF-ETLGLTVTEEEIFASSFAAAAYL 159 (366)
Q Consensus 85 ~viFDiDGTL~d~~~~~~~~~~ai~~l~~~----g~~~~~~Tn~sg~~~~~~~~~l-~~lG~~~~~~~i~~~~~~~~~~l 159 (366)
+|+|||||||++++.+++++.++++.|+.. |+++.++||++++++.++++++ +.+|+++.+++++++..++..++
T Consensus 2 ~~ifD~DGvL~~g~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~~~~~~i~~s~~~~~~ll 81 (321)
T TIGR01456 2 GFAFDIDGVLFRGKKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVDVSPLQVIQSHSPYKSLV 81 (321)
T ss_pred EEEEeCcCceECCccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCCCCHHHHHhhhHHHHHHH
Confidence 689999999999999999999999999998 9999999999999999999988 89999999999999998887777
Q ss_pred HhcCCCCCCeEEEecccchHHHHHHcCCeeeCCCCCCCcccccCCCc--------------cc--CCCCCccEEEEEccC
Q 017785 160 KSIDFPKDKKVYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGF--------------LM--EHDKDVGAVVVGFDR 223 (366)
Q Consensus 160 ~~~~~~~~~~~~~~g~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~--------------~~--~~~~~~~~v~~~~~~ 223 (366)
... +++++++|...+.+.++..|+....+..+.....+ .+.. -. ....++++|+++.+.
T Consensus 82 ~~~----~~~v~viG~~~~~~~l~~~G~~~vv~~~~~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aVvv~~d~ 156 (321)
T TIGR01456 82 NKY----EKRILAVGTGSVRGVAEGYGFQNVVHQDEIVRYFR-DIDPFSGMSDEQVREYSRDIPDLTTKRFDAVLVFNDP 156 (321)
T ss_pred HHc----CCceEEEeChHHHHHHHHcCCcccccHHHHHhcCC-CCCcccccCHHHhhcccccccccCCCceeEEEEecCc
Confidence 543 23689999999999999999875432222111110 0000 00 012478999999998
Q ss_pred CCCHHhHHHHHHHHHcC---------CCcEEEEecCCceeecCCCccccCCCccceeeee----eecCcc--cccCCCcH
Q 017785 224 YFNYYKVQYGTLCIREN---------PGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVG----STQREP--LVVGKPST 288 (366)
Q Consensus 224 ~~~y~~l~~a~~~l~~~---------~g~~~i~sn~d~~~~~~~~~~~~~~~~~~~~~~~----~~~~e~--~~~gKP~p 288 (366)
..+|.+++.+...++.. +.+.++++|+|..++...+..+++.|++..+++. +++.++ ...|||+|
T Consensus 157 ~~~~~~l~~~~~~l~~~g~~g~~~~~~~~~~i~~n~D~~~p~~~g~~~~g~Ga~~~~l~~~~~~~tg~~~~~~~~GKP~~ 236 (321)
T TIGR01456 157 VDWAADIQIISDALNSEGLPGEKSGKPSIPIYFSNQDLLWANEYKLNRFGQGAFRLLLERIYLELNGKPLQYYTLGKPTK 236 (321)
T ss_pred hHHhhhHHHHHHHHhCCCCcCCCCCCCCCCEEEeCCCEeeccCCCCceechHHHHHHHHHHHHHhcCCCcceEEcCCCCh
Confidence 88889999999888753 3378999999999997766568899999988887 456543 67899999
Q ss_pred HHHHHHHHHc--------CC-----CCCcEEEEcCCchhhHHHHHHcCCcEEEEecCCCCcccccCCCCCCCCCEEECCh
Q 017785 289 FMMDYLANKF--------GI-----QKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKI 355 (366)
Q Consensus 289 ~~~~~a~~~l--------gv-----~~~~vl~VGDs~~~Di~~a~~aG~~tv~V~~G~~~~~~l~~~~~~~~pd~v~~sl 355 (366)
.+|+.+++.+ ++ ++++++||||++++||.+|+++||.+|+|+||+...++.. ....|+++++|+
T Consensus 237 ~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tDI~ga~~~G~~silV~tG~~~~~~~~---~~~~p~~vv~~l 313 (321)
T TIGR01456 237 LTYDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASDIIGAQNYGWFSCLVKTGVYNGGDDL---KECKPTLIVNDV 313 (321)
T ss_pred HHHHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhhhhhHHhCCceEEEecccccCCCCCC---CCCCCCEEECCH
Confidence 9999999888 44 4579999999999999999999999999999987765432 235799999999
Q ss_pred hHHHHHH
Q 017785 356 SDFLSLK 362 (366)
Q Consensus 356 ~~l~~~~ 362 (366)
.|+..++
T Consensus 314 ~e~~~~i 320 (321)
T TIGR01456 314 FDAVTKI 320 (321)
T ss_pred HHHHHHh
Confidence 9998765
No 9
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=100.00 E-value=1.6e-33 Score=239.89 Aligned_cols=252 Identities=28% Similarity=0.452 Sum_probs=222.4
Q ss_pred ccCcEEEEecceeEEeCCEeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCCCCcCceeccHHHHHHHHH
Q 017785 81 DSVETFIFDCDGVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLK 160 (366)
Q Consensus 81 ~~ik~viFDiDGTL~d~~~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~~~~~~i~~~~~~~~~~l~ 160 (366)
..+++|+.|+-|||+++...+|++.++++.|+..+..+.|+||.+..|...+.++|+++|+++++++++++..++.+|++
T Consensus 5 ~~v~gvLlDlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~v~eeei~tsl~aa~~~~~ 84 (262)
T KOG3040|consen 5 RAVKGVLLDLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFDVSEEEIFTSLPAARQYLE 84 (262)
T ss_pred cccceEEEeccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCCccHHHhcCccHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCCCeEEEecccchHHHHHHcCCeeeCCCCCCCcccccCCCcccCCCCCccEEEEEcc-CCCCHHhHHHHHHHHHc
Q 017785 161 SIDFPKDKKVYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFD-RYFNYYKVQYGTLCIRE 239 (366)
Q Consensus 161 ~~~~~~~~~~~~~g~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~y~~l~~a~~~l~~ 239 (366)
++.+. .+++-.++.++.+. |+. ..++++|+++.. +.|+|..+..++..|.+
T Consensus 85 ~~~lr----P~l~v~d~a~~dF~--gid----------------------Ts~pn~VViglape~F~y~~ln~AFrvL~e 136 (262)
T KOG3040|consen 85 ENQLR----PYLIVDDDALEDFD--GID----------------------TSDPNCVVIGLAPEGFSYQRLNRAFRVLLE 136 (262)
T ss_pred hcCCC----ceEEEcccchhhCC--Ccc----------------------CCCCCeEEEecCcccccHHHHHHHHHHHHc
Confidence 87553 34444555555543 222 236889999965 67999999999999999
Q ss_pred CCCcEEEEecCCceeecCCCccccCCCccceeeeeeecCcccccCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHH
Q 017785 240 NPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFG 319 (366)
Q Consensus 240 ~~g~~~i~sn~d~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~gKP~p~~~~~a~~~lgv~~~~vl~VGDs~~~Di~~a 319 (366)
.+...+|+.+..+++....+ ...+.|++..+++++++.+....|||+|..|+.+++.+|++|++++||||....|+.+|
T Consensus 137 ~~k~~LIai~kgryykr~~G-l~lgpG~fv~aLeyatg~~a~vvGKP~~~fFe~al~~~gv~p~~aVMIGDD~~dDvgGA 215 (262)
T KOG3040|consen 137 MKKPLLIAIGKGRYYKRVDG-LCLGPGPFVAALEYATGCEATVVGKPSPFFFESALQALGVDPEEAVMIGDDLNDDVGGA 215 (262)
T ss_pred CCCCeEEEecCceeeeeccc-cccCchHHHHHhhhccCceEEEecCCCHHHHHHHHHhcCCChHHheEEccccccchhhH
Confidence 88899999999997754444 57788999999999999999999999999999999999999999999999998999999
Q ss_pred HHcCCcEEEEecCCCCcccccCCCCCCCCCEEECChhHHHHHHH
Q 017785 320 QNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKA 363 (366)
Q Consensus 320 ~~aG~~tv~V~~G~~~~~~l~~~~~~~~pd~v~~sl~~l~~~~~ 363 (366)
++.||+.|+|.||..+..+-+. ....||.+++++.|.++++.
T Consensus 216 q~~GMrgilVkTGK~rpsDe~k--~~~~p~~~~d~f~~AVd~I~ 257 (262)
T KOG3040|consen 216 QACGMRGILVKTGKFRPSDEEK--PPVPPDLTADNFADAVDLII 257 (262)
T ss_pred hhhcceeEEeeccccCCccccc--CCCCcchhhhhHHHHHHHHH
Confidence 9999999999999988744433 44789999999999999874
No 10
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=100.00 E-value=3.2e-33 Score=254.85 Aligned_cols=234 Identities=37% Similarity=0.545 Sum_probs=201.8
Q ss_pred EEEecceeEEeCCEeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHh-cCCCCCcCceeccHHHHHHHHHhcCC
Q 017785 86 FIFDCDGVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFET-LGLTVTEEEIFASSFAAAAYLKSIDF 164 (366)
Q Consensus 86 viFDiDGTL~d~~~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~-lG~~~~~~~i~~~~~~~~~~l~~~~~ 164 (366)
|+||+||||+++..+++++.++|+.++++|+++.++||++++++.++.++|.+ +|+++++++++++...+.+|+.+..
T Consensus 1 ~lfD~DGvL~~~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~~~~~~iits~~~~~~~l~~~~- 79 (236)
T TIGR01460 1 FLFDIDGVLWLGHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVDVSPDQIITSGSVTKDLLRQRF- 79 (236)
T ss_pred CEEeCcCccCcCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCCCCHHHeeeHHHHHHHHHHHhC-
Confidence 58999999999999999999999999999999999999999999999999987 8999999999999999999998752
Q ss_pred CCCCeEEEecccchHHHHHHcCCeeeCCCCCCCcccccCCCcccCCCCCccEEEEEccCCCCHHhHHHHHHHHHcCCCcE
Q 017785 165 PKDKKVYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYKVQYGTLCIRENPGCL 244 (366)
Q Consensus 165 ~~~~~~~~~g~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~y~~l~~a~~~l~~~~g~~ 244 (366)
.+++++++|...+.+.++..|+.....+ +....+.++.+++|+++.+..++|.++..+...+++ ++.+
T Consensus 80 -~~~~v~v~G~~~~~~~l~~~g~~~~~~~----------~~~~~~~~~~~~~vv~~~~~~~~~~~~~~a~~~l~~-~~~~ 147 (236)
T TIGR01460 80 -EGEKVYVIGVGELRESLEGLGFRNDFFD----------DIDHLAIEKIPAAVIVGEPSDFSYDELAKAAYLLAE-GDVP 147 (236)
T ss_pred -CCCEEEEECCHHHHHHHHHcCCcCcccC----------cccccccCCCCeEEEECCCCCcCHHHHHHHHHHHhC-CCCe
Confidence 3467999999999999999997520000 000111233467899999999999999999888863 3389
Q ss_pred EEEecCCceeecCCCccccCCCccceeeeeeecCcccccCCCcHHHHHHHHHHcCCCCCcE-EEEcCCchhhHHHHHHcC
Q 017785 245 FIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQI-CMVGDRLDTDILFGQNGG 323 (366)
Q Consensus 245 ~i~sn~d~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~gKP~p~~~~~a~~~lgv~~~~v-l~VGDs~~~Di~~a~~aG 323 (366)
++++|+|..++...+...++.+.+++.+..+.+.+....+||+|.+|+.++++++++++++ +||||++++||.+|+++|
T Consensus 148 ~i~tN~d~~~~~~~g~~~~~~g~~~~~i~~~~g~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~~G 227 (236)
T TIGR01460 148 FIAANRDDLVRLGDGRFRPGAGAIAAGIKELSGREPTVVGKPSPAIYRAALNLLQARPERRDVMVGDNLRTDILGAKNAG 227 (236)
T ss_pred EEEECCCCCCCCCCCcEeecchHHHHHHHHHhCceeeeecCCCHHHHHHHHHHhCCCCccceEEECCCcHHHHHHHHHCC
Confidence 9999998766666666788899999999998888887889999999999999999999887 999999878999999999
Q ss_pred CcEEEEecC
Q 017785 324 CKTLLVLSG 332 (366)
Q Consensus 324 ~~tv~V~~G 332 (366)
+++++|.+|
T Consensus 228 ~~~i~v~~G 236 (236)
T TIGR01460 228 FDTLLVLTG 236 (236)
T ss_pred CcEEEEecC
Confidence 999999886
No 11
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=99.96 E-value=4.1e-28 Score=222.23 Aligned_cols=233 Identities=21% Similarity=0.244 Sum_probs=182.7
Q ss_pred HHHhccCcEEEEecceeEEeCCEeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCCC-CcCceeccHHHH
Q 017785 77 DELIDSVETFIFDCDGVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTV-TEEEIFASSFAA 155 (366)
Q Consensus 77 ~~~~~~ik~viFDiDGTL~d~~~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~~-~~~~i~~~~~~~ 155 (366)
.++++++++|+||+||||+++.+++|++.+++++|+++|+++.++||+ +++...+.++++++|++. ..+.++++....
T Consensus 2 ~~~~~~~~~~~~D~dG~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~-~~~~~~~~~~L~~~gl~~~~~~~Ii~s~~~~ 80 (242)
T TIGR01459 2 FDLINDYDVFLLDLWGVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNS-PRNIFSLHKTLKSLGINADLPEMIISSGEIA 80 (242)
T ss_pred hhhhhcCCEEEEecccccccCCccCccHHHHHHHHHHCCCEEEEEeCC-CCChHHHHHHHHHCCCCccccceEEccHHHH
Confidence 346788999999999999999999999999999999999999999995 577777778899999988 778999998776
Q ss_pred HHHHHhcC--C-CCCCeEEEecccch-HHHHHHcCCeeeCCCCCCCcccccCCCcccCCCCCccEEEEEcc--CCCCHHh
Q 017785 156 AAYLKSID--F-PKDKKVYVVGEDGI-LKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFD--RYFNYYK 229 (366)
Q Consensus 156 ~~~l~~~~--~-~~~~~~~~~g~~~~-~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~y~~ 229 (366)
..++.... . .....++++|.... .+.+...+.... ....++++|+++.+ ..++|+.
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~~~~~------------------~~~~~~~~vvv~~~~~~~~~~~~ 142 (242)
T TIGR01459 81 VQMILESKKRFDIRNGIIYLLGHLENDIINLMQCYTTDD------------------ENKANASLITIYRSENEKLDLDE 142 (242)
T ss_pred HHHHHhhhhhccCCCceEEEeCCcccchhhhcCCCcccc------------------CCcccCcEEEEcCCCcccCCHHH
Confidence 66665421 1 12356788887553 444544443211 01234677888765 4478999
Q ss_pred HHHHHHHHHcCCCcEEEEecCCceeecCCCccccCCCccceeeeeeecCcccccCCCcHHHHHHHHHHcCCC-CCcEEEE
Q 017785 230 VQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQ-KSQICMV 308 (366)
Q Consensus 230 l~~a~~~l~~~~g~~~i~sn~d~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~gKP~p~~~~~a~~~lgv~-~~~vl~V 308 (366)
+.+++..+.. ++.++++||.+..++. .....++.+.++..+.. .+.++...|||+|.+|+.+++++|.. +++|+||
T Consensus 143 ~~~~l~~l~~-~g~~~i~tN~d~~~~~-~~~~~~~~g~~~~~i~~-~g~~~~~~gKP~~~~~~~~~~~~~~~~~~~~~~v 219 (242)
T TIGR01459 143 FDELFAPIVA-RKIPNICANPDRGINQ-HGIYRYGAGYYAELIKQ-LGGKVIYSGKPYPAIFHKALKECSNIPKNRMLMV 219 (242)
T ss_pred HHHHHHHHHh-CCCcEEEECCCEeccC-CCceEecccHHHHHHHH-hCCcEecCCCCCHHHHHHHHHHcCCCCcccEEEE
Confidence 9999987754 5788899999998764 33456677777776654 45566778999999999999999975 6799999
Q ss_pred cCCchhhHHHHHHcCCcEEEEec
Q 017785 309 GDRLDTDILFGQNGGCKTLLVLS 331 (366)
Q Consensus 309 GDs~~~Di~~a~~aG~~tv~V~~ 331 (366)
||++++||.+|+++|+++++|+|
T Consensus 220 GD~~~~Di~~a~~~G~~~i~v~t 242 (242)
T TIGR01459 220 GDSFYTDILGANRLGIDTALVLT 242 (242)
T ss_pred CCCcHHHHHHHHHCCCeEEEEeC
Confidence 99966999999999999999986
No 12
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=99.88 E-value=2.7e-22 Score=181.47 Aligned_cols=248 Identities=24% Similarity=0.291 Sum_probs=200.5
Q ss_pred EEEEecceeEEeCCEeCCCHHHHHHHHHHC----CCeEEEEeCCCCCCHHHHHHHH-HhcCCCCCcCceeccHHHHHHHH
Q 017785 85 TFIFDCDGVIWKGDKLIDGVPETLDMLRSK----GKRLVFVTNNSTKSRKQYGKKF-ETLGLTVTEEEIFASSFAAAAYL 159 (366)
Q Consensus 85 ~viFDiDGTL~d~~~~~~~~~~ai~~l~~~----g~~~~~~Tn~sg~~~~~~~~~l-~~lG~~~~~~~i~~~~~~~~~~l 159 (366)
+++|||||||+.+++.++++.+|++.|..+ .++++++||.++.+...-++.+ ..+|+++++++++.++..+..+.
T Consensus 37 gfafDIDGVL~RG~~~i~~~~~Alr~L~~~~g~lkIP~vfLTNGGg~~E~~rA~~lS~~Lgv~Vs~dqviqSHsP~r~l~ 116 (389)
T KOG1618|consen 37 GFAFDIDGVLFRGHRPIPGALKALRRLVDNQGQLKIPFVFLTNGGGILESSRAQELSALLGVEVSADQVIQSHSPFRLLV 116 (389)
T ss_pred eEEEecccEEEecCCCCcchHHHHHHHHhcCCCeeccEEEEeCCCCcchhhHHHHHHHhhCCccCHHHHHhhcChHHHHh
Confidence 899999999999999999999999999988 8999999999999999999999 78999999999999998776655
Q ss_pred HhcCCCCCCeEEEecccchHHHHHHcCCeeeCCCCCCCccccc-CC-----------CcccCC--CCCccEEEEEccCCC
Q 017785 160 KSIDFPKDKKVYVVGEDGILKELELAGFQYLGGPEDGGKKIEL-KP-----------GFLMEH--DKDVGAVVVGFDRYF 225 (366)
Q Consensus 160 ~~~~~~~~~~~~~~g~~~~~~~l~~~g~~~~~~~~~~~~~~~~-~~-----------~~~~~~--~~~~~~v~~~~~~~~ 225 (366)
+. +.+.+++.|....++..+..||+-+....++..++.. .| ....+. ...+++|++..|+..
T Consensus 117 ~~----~~k~vLv~G~~~vr~vAegyGFk~Vvt~D~l~k~f~~ldP~t~~~~~~k~~~~~R~~~~~r~ieAv~~~~dPv~ 192 (389)
T KOG1618|consen 117 EY----HYKRVLVVGQGSVREVAEGYGFKNVVTVDELAKYFPLLDPFTDLSRELKTTKLARDRELFRRIEAVLLLGDPVR 192 (389)
T ss_pred hh----hhceEEEecCCcHHHHhhccCccceeeHHHHHHhCCCcccccchhHhhhcccchhccccccceeEEEEecCchh
Confidence 22 3478999999999999999999866665555444321 11 011112 456899999999988
Q ss_pred CHHhHHHHHHHHHcC-------------CCcEEEEecCCceeecCCCccccCCCccceeeeee----ec--CcccccCCC
Q 017785 226 NYYKVQYGTLCIREN-------------PGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGS----TQ--REPLVVGKP 286 (366)
Q Consensus 226 ~y~~l~~a~~~l~~~-------------~g~~~i~sn~d~~~~~~~~~~~~~~~~~~~~~~~~----~~--~e~~~~gKP 286 (366)
|..++|-...++.++ |.++++++|.|..|..+......|.|.+.-+++.. +| .+....|||
T Consensus 193 W~~dlQli~D~l~snG~~gt~~~a~~~~Phipiy~sN~DLlW~~e~~lpR~G~GaF~l~lesiy~kltGk~L~~~t~GKP 272 (389)
T KOG1618|consen 193 WETDLQLIMDVLLSNGSPGTGRLATGPYPHIPIYASNMDLLWMAEYKLPRFGHGAFRLCLESIYQKLTGKPLRYTTLGKP 272 (389)
T ss_pred hhhhHHHHHHHHhcCCCCCcccccCCCCCCCceEEecccccccccCCCccccchHHHHHHHHHHHHhcCCcccccccCCC
Confidence 888999988888762 23478899999999888888888988876665543 33 234678999
Q ss_pred cHHHHHHHHHHc--------CC-CCCcEEEEcCCchhhHHHHH---------------HcCCcEEEEecCCCCc
Q 017785 287 STFMMDYLANKF--------GI-QKSQICMVGDRLDTDILFGQ---------------NGGCKTLLVLSGVTSL 336 (366)
Q Consensus 287 ~p~~~~~a~~~l--------gv-~~~~vl~VGDs~~~Di~~a~---------------~aG~~tv~V~~G~~~~ 336 (366)
++-.|++|...+ +. .+..++||||++..|+.+|+ +-||.+|+|.||+..-
T Consensus 273 t~ltY~~A~~vl~~~ak~~~~~~~~k~lymvGDNP~sDv~GA~lf~~yap~~~~g~~~~~~w~SILV~TGV~~~ 346 (389)
T KOG1618|consen 273 TKLTYDYAEDVLRRQAKRRGGAAPIKKLYMVGDNPMSDVRGANLFHQYAPELGAGGSANYGWISILVRTGVYNG 346 (389)
T ss_pred ceehHHhHHHHHHHHHHhhcccCCcceeeeecCCCcccccccccccccccccccccccCCCceEEEEeeeeecC
Confidence 999999875443 22 56899999999999999997 8899999999999873
No 13
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=99.87 E-value=4.8e-22 Score=183.23 Aligned_cols=85 Identities=18% Similarity=0.282 Sum_probs=72.2
Q ss_pred eeeecCcccccCCCcHHHHHHHHHHcCCC-CCcEEEEcCCchhhHHHHHHcCCcEEEEecCCCC----------------
Q 017785 273 VGSTQREPLVVGKPSTFMMDYLANKFGIQ-KSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTS---------------- 335 (366)
Q Consensus 273 ~~~~~~e~~~~gKP~p~~~~~a~~~lgv~-~~~vl~VGDs~~~Di~~a~~aG~~tv~V~~G~~~---------------- 335 (366)
....+.+....+||+|++|..+++++|+. |++|++|||++ +|+++|+++||.+|+|.+|...
T Consensus 144 d~ii~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~l~IGDs~-~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~~~~~~~~ 222 (253)
T TIGR01422 144 DYNVTTDDVPAGRPAPWMALKNAIELGVYDVAACVKVGDTV-PDIEEGRNAGMWTVGLILSSNELGLSEEEYRALDPAEL 222 (253)
T ss_pred ceEEccccCCCCCCCHHHHHHHHHHcCCCCchheEEECCcH-HHHHHHHHCCCeEEEEecCCcccCCCHHHHHhCCHHHH
Confidence 44455666667999999999999999995 99999999998 9999999999999999998752
Q ss_pred -------cccccCCCCCCCCCEEECChhHHHHHH
Q 017785 336 -------LSMLQSPNNSIQPDFYTNKISDFLSLK 362 (366)
Q Consensus 336 -------~~~l~~~~~~~~pd~v~~sl~~l~~~~ 362 (366)
.+.+.+ .+||++++++.++.+++
T Consensus 223 ~~~~~~~~~~l~~----~~~~~v~~~~~el~~~~ 252 (253)
T TIGR01422 223 EARRAEATARLKA----AGAHYVIDTLAELPAVI 252 (253)
T ss_pred HHHHHHHHHHHHh----cCCCEehhcHHHHHHhh
Confidence 234443 68999999999998765
No 14
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=99.86 E-value=5.4e-21 Score=173.67 Aligned_cols=88 Identities=18% Similarity=0.172 Sum_probs=72.9
Q ss_pred eeeeeeecCcccccCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEecCCCC-cccccCCCCCCCC
Q 017785 270 GAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTS-LSMLQSPNNSIQP 348 (366)
Q Consensus 270 ~~~~~~~~~e~~~~gKP~p~~~~~a~~~lgv~~~~vl~VGDs~~~Di~~a~~aG~~tv~V~~G~~~-~~~l~~~~~~~~p 348 (366)
.++....+.+....+||+|++|+.+++++|++|++|++|||+. +|+++|+++|+++|+|.+|... .+.+.+ ..|
T Consensus 136 ~~f~~i~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~l~IGDs~-~Di~aA~~aG~~~i~v~~g~~~~~~~~~~----~~~ 210 (229)
T PRK13226 136 QRCAVLIGGDTLAERKPHPLPLLVAAERIGVAPTDCVYVGDDE-RDILAARAAGMPSVAALWGYRLHDDDPLA----WQA 210 (229)
T ss_pred hcccEEEecCcCCCCCCCHHHHHHHHHHhCCChhhEEEeCCCH-HHHHHHHHCCCcEEEEeecCCCCCcChhh----cCC
Confidence 3444445555556689999999999999999999999999997 9999999999999999998753 233322 579
Q ss_pred CEEECChhHHHHHH
Q 017785 349 DFYTNKISDFLSLK 362 (366)
Q Consensus 349 d~v~~sl~~l~~~~ 362 (366)
+++++++.+|.+.+
T Consensus 211 ~~~i~~~~el~~~~ 224 (229)
T PRK13226 211 DVLVEQPQLLWNPA 224 (229)
T ss_pred CeeeCCHHHHHHHh
Confidence 99999999998865
No 15
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=99.85 E-value=3.1e-21 Score=179.25 Aligned_cols=87 Identities=20% Similarity=0.227 Sum_probs=72.3
Q ss_pred eeeecCcccccCCCcHHHHHHHHHHcCCC-CCcEEEEcCCchhhHHHHHHcCCcEEEEecCCCC----------------
Q 017785 273 VGSTQREPLVVGKPSTFMMDYLANKFGIQ-KSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTS---------------- 335 (366)
Q Consensus 273 ~~~~~~e~~~~gKP~p~~~~~a~~~lgv~-~~~vl~VGDs~~~Di~~a~~aG~~tv~V~~G~~~---------------- 335 (366)
....+.+....+||+|++|..+++++|+. +++|++|||++ +|+++|+++|+++|+|.+|...
T Consensus 146 d~i~~~~~~~~~KP~p~~~~~a~~~l~~~~~~e~l~IGDs~-~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~ 224 (267)
T PRK13478 146 DHVVTTDDVPAGRPYPWMALKNAIELGVYDVAACVKVDDTV-PGIEEGLNAGMWTVGVILSGNELGLSEEEYQALSAAEL 224 (267)
T ss_pred eEEEcCCcCCCCCCChHHHHHHHHHcCCCCCcceEEEcCcH-HHHHHHHHCCCEEEEEccCcccccCCHHHHHhcCHHHH
Confidence 33445555566899999999999999996 69999999998 9999999999999999998763
Q ss_pred -------cccccCCCCCCCCCEEECChhHHHHHHHh
Q 017785 336 -------LSMLQSPNNSIQPDFYTNKISDFLSLKAA 364 (366)
Q Consensus 336 -------~~~l~~~~~~~~pd~v~~sl~~l~~~~~~ 364 (366)
.+.+.+ .+|+++++++.++.+++..
T Consensus 225 ~~~~~~~~~~l~~----~~a~~vi~~~~~l~~~l~~ 256 (267)
T PRK13478 225 AARRERARARLRA----AGAHYVIDTIADLPAVIAD 256 (267)
T ss_pred HHHHHHHHHHHHH----cCCCeehhhHHHHHHHHHH
Confidence 234433 5899999999999887643
No 16
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=99.85 E-value=1.4e-21 Score=175.58 Aligned_cols=128 Identities=23% Similarity=0.199 Sum_probs=94.1
Q ss_pred HhHHHHHHHHHcCCCcEEEEecCCceeecCCCccccCCCccceeeeeeecCcccccCCCcHHHHHHHHHHcCCCCCcEEE
Q 017785 228 YKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICM 307 (366)
Q Consensus 228 ~~l~~a~~~l~~~~g~~~i~sn~d~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~gKP~p~~~~~a~~~lgv~~~~vl~ 307 (366)
+.+.+.+..+++..-...|+||..... .. .......+..+|....+.+....+||+|.+|+.+++++|++|++|++
T Consensus 85 ~g~~~~l~~L~~~g~~~~i~S~~~~~~-~~---~~l~~~gl~~~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~~ 160 (214)
T PRK13288 85 ETVYETLKTLKKQGYKLGIVTTKMRDT-VE---MGLKLTGLDEFFDVVITLDDVEHAKPDPEPVLKALELLGAKPEEALM 160 (214)
T ss_pred cCHHHHHHHHHHCCCeEEEEeCCCHHH-HH---HHHHHcCChhceeEEEecCcCCCCCCCcHHHHHHHHHcCCCHHHEEE
Confidence 345555555554333346667665421 01 11111223455666666777777999999999999999999999999
Q ss_pred EcCCchhhHHHHHHcCCcEEEEecCCCCcccccCCCCCCCCCEEECChhHHHHHHHh
Q 017785 308 VGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKAA 364 (366)
Q Consensus 308 VGDs~~~Di~~a~~aG~~tv~V~~G~~~~~~l~~~~~~~~pd~v~~sl~~l~~~~~~ 364 (366)
|||++ +|+++|+++|+++|+|.+|....+.+.+ ..|+++++++.++.+++..
T Consensus 161 iGDs~-~Di~aa~~aG~~~i~v~~g~~~~~~l~~----~~~~~~i~~~~~l~~~i~~ 212 (214)
T PRK13288 161 VGDNH-HDILAGKNAGTKTAGVAWTIKGREYLEQ----YKPDFMLDKMSDLLAIVGD 212 (214)
T ss_pred ECCCH-HHHHHHHHCCCeEEEEcCCCCCHHHHhh----cCcCEEECCHHHHHHHHhh
Confidence 99998 9999999999999999999766655543 4799999999999987753
No 17
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=99.84 E-value=9.4e-21 Score=170.83 Aligned_cols=87 Identities=18% Similarity=0.263 Sum_probs=73.6
Q ss_pred eeeeeecCcccccCCCcHHHHHHHHHHcCCC-CCcEEEEcCCchhhHHHHHHcCCcE-EEEecCCCCcccccCCCCCCCC
Q 017785 271 AFVGSTQREPLVVGKPSTFMMDYLANKFGIQ-KSQICMVGDRLDTDILFGQNGGCKT-LLVLSGVTSLSMLQSPNNSIQP 348 (366)
Q Consensus 271 ~~~~~~~~e~~~~gKP~p~~~~~a~~~lgv~-~~~vl~VGDs~~~Di~~a~~aG~~t-v~V~~G~~~~~~l~~~~~~~~p 348 (366)
++....+.+....+||+|++|+.+++++|++ |++|++|||++ +|+++|+++||.+ |+|.+|....+.+.+ ..|
T Consensus 131 ~f~~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~~igD~~-~Di~aa~~aG~~~~i~~~~g~~~~~~~~~----~~~ 205 (220)
T TIGR03351 131 DVDAVVCPSDVAAGRPAPDLILRAMELTGVQDVQSVAVAGDTP-NDLEAGINAGAGAVVGVLTGAHDAEELSR----HPH 205 (220)
T ss_pred cCCEEEcCCcCCCCCCCHHHHHHHHHHcCCCChhHeEEeCCCH-HHHHHHHHCCCCeEEEEecCCCcHHHHhh----cCC
Confidence 3444444555556999999999999999997 79999999998 9999999999999 999998877766654 579
Q ss_pred CEEECChhHHHHHH
Q 017785 349 DFYTNKISDFLSLK 362 (366)
Q Consensus 349 d~v~~sl~~l~~~~ 362 (366)
+++++++.++..++
T Consensus 206 ~~~i~~~~~l~~~~ 219 (220)
T TIGR03351 206 THVLDSVADLPALL 219 (220)
T ss_pred ceeecCHHHHHHhh
Confidence 99999999998764
No 18
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=99.84 E-value=2.4e-21 Score=174.89 Aligned_cols=92 Identities=16% Similarity=0.227 Sum_probs=73.6
Q ss_pred ccceeeeeeecCcccccCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEecCCCCc--ccccCCCC
Q 017785 267 SMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSL--SMLQSPNN 344 (366)
Q Consensus 267 ~~~~~~~~~~~~e~~~~gKP~p~~~~~a~~~lgv~~~~vl~VGDs~~~Di~~a~~aG~~tv~V~~G~~~~--~~l~~~~~ 344 (366)
.+..+|......+.+..+||+|++|+.++++||++|++|++|+|++ ++|++|++|||.+|+|..+.... +.. .
T Consensus 124 gl~~~f~~~v~~~dv~~~KP~Pd~yL~Aa~~Lgv~P~~CvviEDs~-~Gi~Aa~aAGm~vv~v~~~~~~~~~~~~----~ 198 (221)
T COG0637 124 GLLDYFDVIVTADDVARGKPAPDIYLLAAERLGVDPEECVVVEDSP-AGIQAAKAAGMRVVGVPAGHDRPHLDPL----D 198 (221)
T ss_pred cChhhcchhccHHHHhcCCCCCHHHHHHHHHcCCChHHeEEEecch-hHHHHHHHCCCEEEEecCCCCccccchh----h
Confidence 3455666666666777789999999999999999999999999998 99999999999999999844421 222 2
Q ss_pred CCCCCEEECChhHHHHHHH
Q 017785 345 SIQPDFYTNKISDFLSLKA 363 (366)
Q Consensus 345 ~~~pd~v~~sl~~l~~~~~ 363 (366)
....+.+..++.++...++
T Consensus 199 ~~~~~~~~~~~~~l~~~~~ 217 (221)
T COG0637 199 AHGADTVLLDLAELPALLE 217 (221)
T ss_pred hhhcchhhccHHHHHHHHH
Confidence 2578888888888876654
No 19
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=99.84 E-value=4e-21 Score=173.46 Aligned_cols=128 Identities=22% Similarity=0.212 Sum_probs=96.7
Q ss_pred HHhHHHHHHHHHcCCCcEEEEecCCceeecCCCccccCCCccceeeeeeecCcccccCCCcHHHHHHHHHHcCCCCCcEE
Q 017785 227 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQIC 306 (366)
Q Consensus 227 y~~l~~a~~~l~~~~g~~~i~sn~d~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~gKP~p~~~~~a~~~lgv~~~~vl 306 (366)
|+.+.+++..+++......|+||..... .........+..+|....+.+.....||+|..+..+++++|++|++++
T Consensus 91 ~~gv~e~L~~L~~~g~~l~i~T~k~~~~----~~~~l~~~gl~~~F~~i~g~~~~~~~KP~P~~l~~~~~~~~~~~~~~l 166 (220)
T COG0546 91 FPGVKELLAALKSAGYKLGIVTNKPERE----LDILLKALGLADYFDVIVGGDDVPPPKPDPEPLLLLLEKLGLDPEEAL 166 (220)
T ss_pred CCCHHHHHHHHHhCCCeEEEEeCCcHHH----HHHHHHHhCCccccceEEcCCCCCCCCcCHHHHHHHHHHhCCChhheE
Confidence 4556666666666544567777766532 111222233345555555566667799999999999999999988999
Q ss_pred EEcCCchhhHHHHHHcCCcEEEEecCCCCcccccCCCCCCCCCEEECChhHHHHHHH
Q 017785 307 MVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKA 363 (366)
Q Consensus 307 ~VGDs~~~Di~~a~~aG~~tv~V~~G~~~~~~l~~~~~~~~pd~v~~sl~~l~~~~~ 363 (366)
||||+. +||+||++||+.+|+|++|....+.+.. ..||++++++.||..++.
T Consensus 167 ~VGDs~-~Di~aA~~Ag~~~v~v~~g~~~~~~l~~----~~~d~vi~~~~el~~~l~ 218 (220)
T COG0546 167 MVGDSL-NDILAAKAAGVPAVGVTWGYNSREELAQ----AGADVVIDSLAELLALLA 218 (220)
T ss_pred EECCCH-HHHHHHHHcCCCEEEEECCCCCCcchhh----cCCCEEECCHHHHHHHHh
Confidence 999997 9999999999999999999865555544 689999999999998775
No 20
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=99.84 E-value=6.6e-21 Score=175.95 Aligned_cols=125 Identities=17% Similarity=0.189 Sum_probs=89.9
Q ss_pred HHhHHHHHHHHHcCCCcEEEEecCCceeecCCCccccCCCccceeeeeeecCcccccCCCcHHHHHHHHHHcCCCCCcEE
Q 017785 227 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQIC 306 (366)
Q Consensus 227 y~~l~~a~~~l~~~~g~~~i~sn~d~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~gKP~p~~~~~a~~~lgv~~~~vl 306 (366)
|+.+.+.+..++.......|+||...... . .......+..+|....+.+....+||+|++|+.+++++|++|++|+
T Consensus 111 ~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~-~---~~l~~~gl~~~Fd~ii~~~d~~~~KP~Pe~~~~a~~~l~~~p~~~l 186 (260)
T PLN03243 111 RPGSREFVQALKKHEIPIAVASTRPRRYL-E---RAIEAVGMEGFFSVVLAAEDVYRGKPDPEMFMYAAERLGFIPERCI 186 (260)
T ss_pred CCCHHHHHHHHHHCCCEEEEEeCcCHHHH-H---HHHHHcCCHhhCcEEEecccCCCCCCCHHHHHHHHHHhCCChHHeE
Confidence 34455566666554444567777654211 1 1111122345566666667767799999999999999999999999
Q ss_pred EEcCCchhhHHHHHHcCCcEEEEecCCCCcccccCCCCCCCCCEEECChhHHHHHHH
Q 017785 307 MVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKA 363 (366)
Q Consensus 307 ~VGDs~~~Di~~a~~aG~~tv~V~~G~~~~~~l~~~~~~~~pd~v~~sl~~l~~~~~ 363 (366)
+|||+. +|+++|+++||++|+|. |......+. .|+++++++.|+..+.-
T Consensus 187 ~IgDs~-~Di~aA~~aG~~~i~v~-g~~~~~~l~------~ad~vi~~~~el~~~~~ 235 (260)
T PLN03243 187 VFGNSN-SSVEAAHDGCMKCVAVA-GKHPVYELS------AGDLVVRRLDDLSVVDL 235 (260)
T ss_pred EEcCCH-HHHHHHHHcCCEEEEEe-cCCchhhhc------cCCEEeCCHHHHHHHHH
Confidence 999997 99999999999999997 554444443 48999999999977553
No 21
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=99.83 E-value=1.2e-20 Score=173.52 Aligned_cols=122 Identities=13% Similarity=0.019 Sum_probs=88.9
Q ss_pred HHhHHHHHHHHHcCCCcEEEEecCCceeecCCCccccCCCccceeeeeeecCcccccCCCcHHHHHHHHHHcCCCCCcEE
Q 017785 227 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQIC 306 (366)
Q Consensus 227 y~~l~~a~~~l~~~~g~~~i~sn~d~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~gKP~p~~~~~a~~~lgv~~~~vl 306 (366)
|+.+.+.+..++++.....|+||...... . .......+..+|....+.+....+||+|++|+.+++++|++|++|+
T Consensus 110 ~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~-~---~~l~~~gl~~~Fd~iv~~~~~~~~KP~p~~~~~a~~~~~~~~~~~l 185 (248)
T PLN02770 110 LNGLYKLKKWIEDRGLKRAAVTNAPRENA-E---LMISLLGLSDFFQAVIIGSECEHAKPHPDPYLKALEVLKVSKDHTF 185 (248)
T ss_pred CccHHHHHHHHHHcCCeEEEEeCCCHHHH-H---HHHHHcCChhhCcEEEecCcCCCCCCChHHHHHHHHHhCCChhHEE
Confidence 33455555556554444567777664321 1 1112223345566666666666799999999999999999999999
Q ss_pred EEcCCchhhHHHHHHcCCcEEEEecCCCCcccccCCCCCCCCCEEECChhHH
Q 017785 307 MVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDF 358 (366)
Q Consensus 307 ~VGDs~~~Di~~a~~aG~~tv~V~~G~~~~~~l~~~~~~~~pd~v~~sl~~l 358 (366)
+|||++ .|+++|+++|+++|+|.+|. ..+.+.. ..|+++++++.|+
T Consensus 186 ~vgDs~-~Di~aA~~aGi~~i~v~~g~-~~~~l~~----~~a~~vi~~~~e~ 231 (248)
T PLN02770 186 VFEDSV-SGIKAGVAAGMPVVGLTTRN-PESLLME----AKPTFLIKDYEDP 231 (248)
T ss_pred EEcCCH-HHHHHHHHCCCEEEEEeCCC-CHHHHhh----cCCCEEeccchhh
Confidence 999998 99999999999999999985 4344432 5799999999993
No 22
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=99.83 E-value=2.4e-21 Score=173.66 Aligned_cols=124 Identities=19% Similarity=0.230 Sum_probs=88.5
Q ss_pred hHHHHHHHHHcCCCcEEEEecCCceeecCCCccccCCCccceeeeeeecCcccccCCCcHHHHHHHHHHcCCCCCcEEEE
Q 017785 229 KVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMV 308 (366)
Q Consensus 229 ~l~~a~~~l~~~~g~~~i~sn~d~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~gKP~p~~~~~a~~~lgv~~~~vl~V 308 (366)
.+.+.+..++.......|+||...... . .......+..++....+.+....+||+|++|..+++++|++|++|++|
T Consensus 89 g~~~~L~~l~~~g~~~~i~S~~~~~~~-~---~~l~~~~l~~~f~~~~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~~i 164 (213)
T TIGR01449 89 GVEATLGALRAKGLRLGLVTNKPTPLA-R---PLLELLGLAKYFSVLIGGDSLAQRKPHPDPLLLAAERLGVAPQQMVYV 164 (213)
T ss_pred CHHHHHHHHHHCCCeEEEEeCCCHHHH-H---HHHHHcCcHhhCcEEEecCCCCCCCCChHHHHHHHHHcCCChhHeEEe
Confidence 344555555443333556666543210 1 111111223344445556666678999999999999999999999999
Q ss_pred cCCchhhHHHHHHcCCcEEEEecCCCCcccccCCCCCCCCCEEECChhHHHHH
Q 017785 309 GDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSL 361 (366)
Q Consensus 309 GDs~~~Di~~a~~aG~~tv~V~~G~~~~~~l~~~~~~~~pd~v~~sl~~l~~~ 361 (366)
||+. +|+++|+++|+++|+|.+|....+.+.. ..|+++++++.++..+
T Consensus 165 gDs~-~d~~aa~~aG~~~i~v~~g~~~~~~l~~----~~a~~~i~~~~~l~~~ 212 (213)
T TIGR01449 165 GDSR-VDIQAARAAGCPSVLLTYGYRYGEAIDL----LPPDVLYDSLNELPPL 212 (213)
T ss_pred CCCH-HHHHHHHHCCCeEEEEccCCCCCcchhh----cCCCeEeCCHHHHHhh
Confidence 9997 9999999999999999998876555543 4799999999998865
No 23
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=99.83 E-value=4.2e-20 Score=166.57 Aligned_cols=126 Identities=26% Similarity=0.242 Sum_probs=91.9
Q ss_pred HHhHHHHHHHHHcCCCcEEEEecCCceeecCCCccccCCCccceeeeeeecCcccccCCCcHHHHHHHHHHcCCCCCcEE
Q 017785 227 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQIC 306 (366)
Q Consensus 227 y~~l~~a~~~l~~~~g~~~i~sn~d~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~gKP~p~~~~~a~~~lgv~~~~vl 306 (366)
++.+.+.+..++.++....++||...... . .......+..++....+.+....+||+|++|+.+++++|+++++|+
T Consensus 96 ~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~-~---~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~ 171 (221)
T TIGR02253 96 YPGVRDTLMELRESGYRLGIITDGLPVKQ-W---EKLERLGVRDFFDAVITSEEEGVEKPHPKIFYAALKRLGVKPEEAV 171 (221)
T ss_pred CCCHHHHHHHHHHCCCEEEEEeCCchHHH-H---HHHHhCChHHhccEEEEeccCCCCCCCHHHHHHHHHHcCCChhhEE
Confidence 44567777777765455778888764211 1 1111122344555556666677799999999999999999999999
Q ss_pred EEcCCchhhHHHHHHcCCcEEEEecCCCCcccccCCCCCCCCCEEECChhHHH
Q 017785 307 MVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFL 359 (366)
Q Consensus 307 ~VGDs~~~Di~~a~~aG~~tv~V~~G~~~~~~l~~~~~~~~pd~v~~sl~~l~ 359 (366)
+|||++.+|+++|+++|+++|+|.++........ ....|+++++++.|++
T Consensus 172 ~igDs~~~di~~A~~aG~~~i~~~~~~~~~~~~~---~~~~~~~~i~~~~el~ 221 (221)
T TIGR02253 172 MVGDRLDKDIKGAKNLGMKTVWINQGKSSKMEDD---VYPYPDYEISSLRELL 221 (221)
T ss_pred EECCChHHHHHHHHHCCCEEEEECCCCCcccccc---cccCCCeeeCcHHhhC
Confidence 9999976899999999999999998875432211 1246899999999863
No 24
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=99.83 E-value=9.3e-20 Score=170.80 Aligned_cols=76 Identities=16% Similarity=0.228 Sum_probs=66.9
Q ss_pred cCcccccCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEecCCCCcccccCCCCCCCCCEEECChh
Q 017785 277 QREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKIS 356 (366)
Q Consensus 277 ~~e~~~~gKP~p~~~~~a~~~lgv~~~~vl~VGDs~~~Di~~a~~aG~~tv~V~~G~~~~~~l~~~~~~~~pd~v~~sl~ 356 (366)
+.+....+||+|++|..+++++|++|++|++|||++ +|+++|+++||++|+|.+|....+.+. .||++++++.
T Consensus 194 ~~~~~~~~KP~p~~~~~a~~~~~~~p~~~l~IGDs~-~Di~aA~~aG~~~i~v~~g~~~~~~l~------~ad~vi~~~~ 266 (286)
T PLN02779 194 AGDDVPKKKPDPDIYNLAAETLGVDPSRCVVVEDSV-IGLQAAKAAGMRCIVTKSSYTADEDFS------GADAVFDCLG 266 (286)
T ss_pred eccccCCCCCCHHHHHHHHHHhCcChHHEEEEeCCH-HhHHHHHHcCCEEEEEccCCccccccC------CCcEEECChh
Confidence 344455689999999999999999999999999998 999999999999999999877665542 5999999999
Q ss_pred HHH
Q 017785 357 DFL 359 (366)
Q Consensus 357 ~l~ 359 (366)
++.
T Consensus 267 ~l~ 269 (286)
T PLN02779 267 DVP 269 (286)
T ss_pred hcc
Confidence 984
No 25
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=99.82 E-value=2.2e-20 Score=166.62 Aligned_cols=128 Identities=20% Similarity=0.197 Sum_probs=93.5
Q ss_pred HHhHHHHHHHHHcCCCcEEEEecCCceeecCCCccccCCCccceeeeeeecCcccccCCCcHHHHHHHHHHcCCCCCcEE
Q 017785 227 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQIC 306 (366)
Q Consensus 227 y~~l~~a~~~l~~~~g~~~i~sn~d~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~gKP~p~~~~~a~~~lgv~~~~vl 306 (366)
|+...+.+..+++.+....++||...... . .......+..++....+.+....+||+|++|+.+++++|+++++|+
T Consensus 77 ~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~-~---~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~l 152 (205)
T TIGR01454 77 FPGVPELLAELRADGVGTAIATGKSGPRA-R---SLLEALGLLPLFDHVIGSDEVPRPKPAPDIVREALRLLDVPPEDAV 152 (205)
T ss_pred CCCHHHHHHHHHHCCCeEEEEeCCchHHH-H---HHHHHcCChhheeeEEecCcCCCCCCChHHHHHHHHHcCCChhheE
Confidence 33455555555554344566777554211 1 1111122234455555555666799999999999999999999999
Q ss_pred EEcCCchhhHHHHHHcCCcEEEEecCCCCcccccCCCCCCCCCEEECChhHHHHHHH
Q 017785 307 MVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKA 363 (366)
Q Consensus 307 ~VGDs~~~Di~~a~~aG~~tv~V~~G~~~~~~l~~~~~~~~pd~v~~sl~~l~~~~~ 363 (366)
+|||++ +|+++|+++|+++|+|.+|....+.+.+ ..|+++++++.++.+++.
T Consensus 153 ~igD~~-~Di~aA~~~Gi~~i~~~~g~~~~~~l~~----~~~~~~~~~~~~l~~~~~ 204 (205)
T TIGR01454 153 MVGDAV-TDLASARAAGTATVAALWGEGDAGELLA----ARPDFLLRKPQSLLALCR 204 (205)
T ss_pred EEcCCH-HHHHHHHHcCCeEEEEEecCCChhhhhh----cCCCeeeCCHHHHHHHhh
Confidence 999997 9999999999999999999987776654 579999999999988754
No 26
>PRK11587 putative phosphatase; Provisional
Probab=99.82 E-value=8.2e-20 Score=164.64 Aligned_cols=76 Identities=20% Similarity=0.280 Sum_probs=64.2
Q ss_pred ecCcccccCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEecCCCCcccccCCCCCCCCCEEECCh
Q 017785 276 TQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKI 355 (366)
Q Consensus 276 ~~~e~~~~gKP~p~~~~~a~~~lgv~~~~vl~VGDs~~~Di~~a~~aG~~tv~V~~G~~~~~~l~~~~~~~~pd~v~~sl 355 (366)
.+.+.....||+|++|..+++++|++|++|++|||++ .|+++|+++|+++|+|.++... ... ..|+++++++
T Consensus 129 ~~~~~~~~~KP~p~~~~~~~~~~g~~p~~~l~igDs~-~di~aA~~aG~~~i~v~~~~~~-~~~------~~~~~~~~~~ 200 (218)
T PRK11587 129 VTAERVKRGKPEPDAYLLGAQLLGLAPQECVVVEDAP-AGVLSGLAAGCHVIAVNAPADT-PRL------DEVDLVLHSL 200 (218)
T ss_pred EEHHHhcCCCCCcHHHHHHHHHcCCCcccEEEEecch-hhhHHHHHCCCEEEEECCCCch-hhh------ccCCEEecch
Confidence 3444555689999999999999999999999999998 9999999999999999876432 222 3599999999
Q ss_pred hHHH
Q 017785 356 SDFL 359 (366)
Q Consensus 356 ~~l~ 359 (366)
.|+.
T Consensus 201 ~el~ 204 (218)
T PRK11587 201 EQLT 204 (218)
T ss_pred hhee
Confidence 9873
No 27
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=99.82 E-value=4.3e-20 Score=166.91 Aligned_cols=125 Identities=10% Similarity=0.034 Sum_probs=91.8
Q ss_pred HHhHHHHHHHHHcCCCcEEEEecCCceeecCCCccccCCCccceeeeeeecCcccccCCCcHHHHHHHHHHcCCCCCcEE
Q 017785 227 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQIC 306 (366)
Q Consensus 227 y~~l~~a~~~l~~~~g~~~i~sn~d~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~gKP~p~~~~~a~~~lgv~~~~vl 306 (366)
|+.+.+.+..++++.....|+||...... ........+..++....+.+....+||+|++|+.+++++|++|++|+
T Consensus 94 ~~g~~~~l~~l~~~g~~~~i~S~~~~~~~----~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~ 169 (222)
T PRK10826 94 LPGVREALALCKAQGLKIGLASASPLHML----EAVLTMFDLRDYFDALASAEKLPYSKPHPEVYLNCAAKLGVDPLTCV 169 (222)
T ss_pred CCCHHHHHHHHHHCCCeEEEEeCCcHHHH----HHHHHhCcchhcccEEEEcccCCCCCCCHHHHHHHHHHcCCCHHHeE
Confidence 45566677777665445677777654221 11111122344555555666667799999999999999999999999
Q ss_pred EEcCCchhhHHHHHHcCCcEEEEecCCCCcccccCCCCCCCCCEEECChhHHHHH
Q 017785 307 MVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSL 361 (366)
Q Consensus 307 ~VGDs~~~Di~~a~~aG~~tv~V~~G~~~~~~l~~~~~~~~pd~v~~sl~~l~~~ 361 (366)
+|||+. +|+++|+++|+++|+|.++....+... ..+++++.|+.|+...
T Consensus 170 ~igDs~-~Di~aA~~aG~~~i~v~~~~~~~~~~~-----~~~~~~~~~~~dl~~~ 218 (222)
T PRK10826 170 ALEDSF-NGMIAAKAARMRSIVVPAPEQQNDPRW-----ALADVKLESLTELTAA 218 (222)
T ss_pred EEcCCh-hhHHHHHHcCCEEEEecCCccCchhhh-----hhhheeccCHHHHhhh
Confidence 999998 999999999999999998765543332 3589999999998653
No 28
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=99.81 E-value=2.5e-19 Score=163.72 Aligned_cols=124 Identities=19% Similarity=0.120 Sum_probs=93.6
Q ss_pred HHhHHHHHHHHHcCCCcEEEEecCCceeecCCCccccCCCccceeeeeeecCcccccCCCcHHHHHHHHHHcCCCCCcEE
Q 017785 227 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQIC 306 (366)
Q Consensus 227 y~~l~~a~~~l~~~~g~~~i~sn~d~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~gKP~p~~~~~a~~~lgv~~~~vl 306 (366)
|+.+.+.+..+++. ....++||..... ....+..+|....+.+.....||+|++|+.+++++|++|++|+
T Consensus 115 ~~gv~~~L~~L~~~-~~l~i~Tn~~~~~---------~~~gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~ 184 (238)
T PRK10748 115 PQATHDTLKQLAKK-WPLVAITNGNAQP---------ELFGLGDYFEFVLRAGPHGRSKPFSDMYHLAAEKLNVPIGEIL 184 (238)
T ss_pred CccHHHHHHHHHcC-CCEEEEECCCchH---------HHCCcHHhhceeEecccCCcCCCcHHHHHHHHHHcCCChhHEE
Confidence 56678888888764 5678888866421 1123345555666666666799999999999999999999999
Q ss_pred EEcCCchhhHHHHHHcCCcEEEEecCCCCcccccCCCCCCCCCEEECChhHHHHHH
Q 017785 307 MVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLK 362 (366)
Q Consensus 307 ~VGDs~~~Di~~a~~aG~~tv~V~~G~~~~~~l~~~~~~~~pd~v~~sl~~l~~~~ 362 (366)
||||++..||.+|+++||++|||..+...... .......|++.+.+|.||.+++
T Consensus 185 ~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~--~~~~~~~p~~~i~~l~el~~~~ 238 (238)
T PRK10748 185 HVGDDLTTDVAGAIRCGMQACWINPENGDLMQ--TWDSRLLPHIEISRLASLTSLI 238 (238)
T ss_pred EEcCCcHHHHHHHHHCCCeEEEEcCCCccccc--cccccCCCCEEECCHHHHHhhC
Confidence 99999559999999999999999886533111 1112257999999999998763
No 29
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=99.81 E-value=4e-20 Score=167.09 Aligned_cols=130 Identities=19% Similarity=0.233 Sum_probs=92.4
Q ss_pred HHhHHHHHHHHHcCCCcEEEEecCCceeecCCCccccCCCccceeeeeeecCcccccCCCcHHHHHHHHHHcCCCCCcEE
Q 017785 227 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQIC 306 (366)
Q Consensus 227 y~~l~~a~~~l~~~~g~~~i~sn~d~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~gKP~p~~~~~a~~~lgv~~~~vl 306 (366)
++.+.+.+..+++......++||...... . .+.....+...+....+.+.....||+|++|+.+++++++++++|+
T Consensus 95 ~~g~~~~l~~l~~~g~~~~i~S~~~~~~~-~---~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i 170 (226)
T PRK13222 95 YPGVKETLAALKAAGYPLAVVTNKPTPFV-A---PLLEALGIADYFSVVIGGDSLPNKKPDPAPLLLACEKLGLDPEEML 170 (226)
T ss_pred CCCHHHHHHHHHHCCCeEEEEeCCCHHHH-H---HHHHHcCCccCccEEEcCCCCCCCCcChHHHHHHHHHcCCChhheE
Confidence 33455556566554334556666654211 0 0111111233344455555566789999999999999999999999
Q ss_pred EEcCCchhhHHHHHHcCCcEEEEecCCCCcccccCCCCCCCCCEEECChhHHHHHHHhh
Q 017785 307 MVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKAAA 365 (366)
Q Consensus 307 ~VGDs~~~Di~~a~~aG~~tv~V~~G~~~~~~l~~~~~~~~pd~v~~sl~~l~~~~~~~ 365 (366)
+|||+. +|+++|+++|+++|+|.+|....+.+.. ..|+++++++.++..++.++
T Consensus 171 ~igD~~-~Di~~a~~~g~~~i~v~~g~~~~~~~~~----~~~~~~i~~~~~l~~~l~~~ 224 (226)
T PRK13222 171 FVGDSR-NDIQAARAAGCPSVGVTYGYNYGEPIAL----SEPDVVIDHFAELLPLLGLA 224 (226)
T ss_pred EECCCH-HHHHHHHHCCCcEEEECcCCCCccchhh----cCCCEEECCHHHHHHHHHHh
Confidence 999997 9999999999999999998765444432 47999999999999987654
No 30
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=99.81 E-value=4e-20 Score=177.15 Aligned_cols=120 Identities=16% Similarity=0.130 Sum_probs=85.9
Q ss_pred HhHHHHHHHHHcCCCcEEEEecCCceeecCCCccccCCCccceeeeeeecCcccccCCCcHHHHHHHHHHcCCCCCcEEE
Q 017785 228 YKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICM 307 (366)
Q Consensus 228 ~~l~~a~~~l~~~~g~~~i~sn~d~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~gKP~p~~~~~a~~~lgv~~~~vl~ 307 (366)
+.+.+.+..++.+.....|+||..... .........+..+|....+.+....+||+|++|+.+++++|++|++|+|
T Consensus 219 pGa~ElL~~Lk~~GiklaIaSn~~~~~----~~~~L~~lgL~~yFd~Iv~sddv~~~KP~Peifl~A~~~lgl~Peecl~ 294 (381)
T PLN02575 219 TGSQEFVNVLMNYKIPMALVSTRPRKT----LENAIGSIGIRGFFSVIVAAEDVYRGKPDPEMFIYAAQLLNFIPERCIV 294 (381)
T ss_pred cCHHHHHHHHHHCCCeEEEEeCCCHHH----HHHHHHHcCCHHHceEEEecCcCCCCCCCHHHHHHHHHHcCCCcccEEE
Confidence 334555555554433456667765421 1111222223455666666777677999999999999999999999999
Q ss_pred EcCCchhhHHHHHHcCCcEEEEecCCCCcccccCCCCCCCCCEEECChhHHH
Q 017785 308 VGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFL 359 (366)
Q Consensus 308 VGDs~~~Di~~a~~aG~~tv~V~~G~~~~~~l~~~~~~~~pd~v~~sl~~l~ 359 (366)
|||+. .||++|+++||++|+|.++. ....+ ..++++++++.||.
T Consensus 295 IGDS~-~DIeAAk~AGm~~IgV~~~~-~~~~l------~~Ad~iI~s~~EL~ 338 (381)
T PLN02575 295 FGNSN-QTVEAAHDARMKCVAVASKH-PIYEL------GAADLVVRRLDELS 338 (381)
T ss_pred EcCCH-HHHHHHHHcCCEEEEECCCC-ChhHh------cCCCEEECCHHHHH
Confidence 99997 99999999999999998753 22333 24899999999984
No 31
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=99.81 E-value=1.3e-19 Score=168.61 Aligned_cols=128 Identities=16% Similarity=0.170 Sum_probs=90.0
Q ss_pred HHhHHHHHHHHHcCCCcEEEEecCCceeecCCCccccCCCccceeeeeeecCcccccCCCcHHHHHHHHHHcCCCCCcEE
Q 017785 227 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQIC 306 (366)
Q Consensus 227 y~~l~~a~~~l~~~~g~~~i~sn~d~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~gKP~p~~~~~a~~~lgv~~~~vl 306 (366)
++.+.+.+..++..+....++||..... .. .......+..++....+.+....+||+|++|+.+++++|+++++|+
T Consensus 103 ~~g~~e~L~~Lk~~g~~l~ivTn~~~~~-~~---~~l~~~~i~~~f~~i~~~d~~~~~Kp~p~~~~~~~~~~g~~~~~~l 178 (272)
T PRK13223 103 YPGVRDTLKWLKKQGVEMALITNKPERF-VA---PLLDQMKIGRYFRWIIGGDTLPQKKPDPAALLFVMKMAGVPPSQSL 178 (272)
T ss_pred CCCHHHHHHHHHHCCCeEEEEECCcHHH-HH---HHHHHcCcHhhCeEEEecCCCCCCCCCcHHHHHHHHHhCCChhHEE
Confidence 3445555555554333455666654321 00 0111111223344445555556689999999999999999999999
Q ss_pred EEcCCchhhHHHHHHcCCcEEEEecCCCCcccccCCCCCCCCCEEECChhHHHHHHH
Q 017785 307 MVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKA 363 (366)
Q Consensus 307 ~VGDs~~~Di~~a~~aG~~tv~V~~G~~~~~~l~~~~~~~~pd~v~~sl~~l~~~~~ 363 (366)
+|||+. +||++|+++|+++++|.+|....+.+.+ ..||++++++.+|.+++.
T Consensus 179 ~IGD~~-~Di~aA~~aGi~~i~v~~G~~~~~~l~~----~~~~~vi~~l~el~~~~~ 230 (272)
T PRK13223 179 FVGDSR-SDVLAAKAAGVQCVALSYGYNHGRPIAE----ESPALVIDDLRALLPGCA 230 (272)
T ss_pred EECCCH-HHHHHHHHCCCeEEEEecCCCCchhhhh----cCCCEEECCHHHHHHHHh
Confidence 999997 9999999999999999998876665543 479999999999987654
No 32
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=99.81 E-value=3.1e-19 Score=140.90 Aligned_cols=101 Identities=52% Similarity=0.891 Sum_probs=90.4
Q ss_pred EEEecceeEEeCCEeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCCCCcCceeccHHHHHHHHHhcCCC
Q 017785 86 FIFDCDGVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLKSIDFP 165 (366)
Q Consensus 86 viFDiDGTL~d~~~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~~~~~~i~~~~~~~~~~l~~~~~~ 165 (366)
|+||+|||||++.+++|++.++|+.|++.|+++.++||++.+++.++.++|+.+|+++++++++++..++..|+.+. .
T Consensus 1 ~l~D~dGvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~~~i~ts~~~~~~~l~~~--~ 78 (101)
T PF13344_consen 1 FLFDLDGVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDEDEIITSGMAAAEYLKEH--K 78 (101)
T ss_dssp EEEESTTTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--GGGEEEHHHHHHHHHHHH--T
T ss_pred CEEeCccEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCcCEEEChHHHHHHHHHhc--C
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999985 3
Q ss_pred CCCeEEEecccchHHHHHHcCCe
Q 017785 166 KDKKVYVVGEDGILKELELAGFQ 188 (366)
Q Consensus 166 ~~~~~~~~g~~~~~~~l~~~g~~ 188 (366)
.+++++++|.+.+.+.+++.|++
T Consensus 79 ~~~~v~vlG~~~l~~~l~~~G~e 101 (101)
T PF13344_consen 79 GGKKVYVLGSDGLREELREAGFE 101 (101)
T ss_dssp TSSEEEEES-HHHHHHHHHTTEE
T ss_pred CCCEEEEEcCHHHHHHHHHcCCC
Confidence 46899999999999999999874
No 33
>PRK06769 hypothetical protein; Validated
Probab=99.80 E-value=1.1e-18 Score=151.61 Aligned_cols=75 Identities=29% Similarity=0.413 Sum_probs=66.0
Q ss_pred cCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEecCCCCc------ccccCCCCCCCCCEEECChh
Q 017785 283 VGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSL------SMLQSPNNSIQPDFYTNKIS 356 (366)
Q Consensus 283 ~gKP~p~~~~~a~~~lgv~~~~vl~VGDs~~~Di~~a~~aG~~tv~V~~G~~~~------~~l~~~~~~~~pd~v~~sl~ 356 (366)
..||+|++|+.+++++|++|++|++|||++ +|+++|+++|+.+|+|.+|.... +.+. ...|+++++++.
T Consensus 91 ~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~-~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~l~----~~~~~~~~~~~~ 165 (173)
T PRK06769 91 CRKPSTGMLLQAAEKHGLDLTQCAVIGDRW-TDIVAAAKVNATTILVRTGAGYDALHTYRDKWA----HIEPNYIAENFE 165 (173)
T ss_pred CCCCCHHHHHHHHHHcCCCHHHeEEEcCCH-HHHHHHHHCCCeEEEEecCCCchhhhhhhcccc----cCCCcchhhCHH
Confidence 389999999999999999999999999998 99999999999999999987542 2222 257999999999
Q ss_pred HHHHHH
Q 017785 357 DFLSLK 362 (366)
Q Consensus 357 ~l~~~~ 362 (366)
|+++++
T Consensus 166 el~~~l 171 (173)
T PRK06769 166 DAVNWI 171 (173)
T ss_pred HHHHHH
Confidence 999876
No 34
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=99.80 E-value=1.9e-18 Score=150.56 Aligned_cols=71 Identities=28% Similarity=0.348 Sum_probs=62.6
Q ss_pred cCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCcE-EEEecCCCCcccccCCCCCCCCCEEECChhHHH
Q 017785 283 VGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKT-LLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFL 359 (366)
Q Consensus 283 ~gKP~p~~~~~a~~~lgv~~~~vl~VGDs~~~Di~~a~~aG~~t-v~V~~G~~~~~~l~~~~~~~~pd~v~~sl~~l~ 359 (366)
.+||+|++|..+++++|+++++|+||||+. +||++|+++|+++ ++|.+|.......+ ..||++++++.||.
T Consensus 104 ~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~-~Di~aA~~aG~~~~i~v~~g~~~~~~~~-----~~ad~~i~~~~el~ 175 (176)
T TIGR00213 104 CRKPKPGMLLQARKELHIDMAQSYMVGDKL-EDMQAGVAAKVKTNVLVRTGKPITPEAE-----NIADWVLNSLADLP 175 (176)
T ss_pred CCCCCHHHHHHHHHHcCcChhhEEEEcCCH-HHHHHHHHCCCcEEEEEecCCccccccc-----ccCCEEeccHHHhh
Confidence 389999999999999999999999999997 9999999999998 89999865433322 46999999999986
No 35
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=99.80 E-value=1.3e-19 Score=168.36 Aligned_cols=75 Identities=21% Similarity=0.247 Sum_probs=67.4
Q ss_pred CCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEecCCCCcccccCCCCCCCCCEEECChhHHHHHHHh
Q 017785 285 KPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKAA 364 (366)
Q Consensus 285 KP~p~~~~~a~~~lgv~~~~vl~VGDs~~~Di~~a~~aG~~tv~V~~G~~~~~~l~~~~~~~~pd~v~~sl~~l~~~~~~ 364 (366)
+|+++.|+.++++++++|++|++|||+. +|+++|+++||++|+|.+|....+.+.+ ..||++++++.+|++++.+
T Consensus 195 ~~k~~~~~~~l~~~~~~p~~~l~IGDs~-~Di~aA~~AG~~~I~v~~g~~~~~~l~~----~~ad~~i~~~~eL~~~~~~ 269 (273)
T PRK13225 195 LSKRRALSQLVAREGWQPAAVMYVGDET-RDVEAARQVGLIAVAVTWGFNDRQSLVA----ACPDWLLETPSDLLQAVTQ 269 (273)
T ss_pred CCCHHHHHHHHHHhCcChhHEEEECCCH-HHHHHHHHCCCeEEEEecCCCCHHHHHH----CCCCEEECCHHHHHHHHHH
Confidence 4567899999999999999999999997 9999999999999999999887766654 5799999999999998754
No 36
>PLN02940 riboflavin kinase
Probab=99.79 E-value=9e-20 Score=177.31 Aligned_cols=85 Identities=19% Similarity=0.243 Sum_probs=71.1
Q ss_pred ceeeeeeecCcccccCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEecCCCCcccccCCCCCCCC
Q 017785 269 VGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQP 348 (366)
Q Consensus 269 ~~~~~~~~~~e~~~~gKP~p~~~~~a~~~lgv~~~~vl~VGDs~~~Di~~a~~aG~~tv~V~~G~~~~~~l~~~~~~~~p 348 (366)
..++....+.+....+||+|++|..+++++|++|++|++|||+. +|+++|+++||++|+|.++....... ..|
T Consensus 134 ~~~Fd~ii~~d~v~~~KP~p~~~~~a~~~lgv~p~~~l~VGDs~-~Di~aA~~aGi~~I~v~~g~~~~~~~------~~a 206 (382)
T PLN02940 134 KESFSVIVGGDEVEKGKPSPDIFLEAAKRLNVEPSNCLVIEDSL-PGVMAGKAAGMEVIAVPSIPKQTHLY------SSA 206 (382)
T ss_pred HhhCCEEEehhhcCCCCCCHHHHHHHHHHcCCChhHEEEEeCCH-HHHHHHHHcCCEEEEECCCCcchhhc------cCc
Confidence 34555566666667799999999999999999999999999998 99999999999999999875433221 469
Q ss_pred CEEECChhHHHH
Q 017785 349 DFYTNKISDFLS 360 (366)
Q Consensus 349 d~v~~sl~~l~~ 360 (366)
+++++++.|+..
T Consensus 207 d~~i~sl~el~~ 218 (382)
T PLN02940 207 DEVINSLLDLQP 218 (382)
T ss_pred cEEeCCHhHcCH
Confidence 999999999753
No 37
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=99.77 E-value=4.6e-19 Score=159.93 Aligned_cols=121 Identities=12% Similarity=0.046 Sum_probs=82.2
Q ss_pred hHHHHHHHHHcCCCcEEEEecCCceeecCCCccccCCCccceeee-eeecCcccccCCCcHHHHHHHHHHcCCCCCcEEE
Q 017785 229 KVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFV-GSTQREPLVVGKPSTFMMDYLANKFGIQKSQICM 307 (366)
Q Consensus 229 ~l~~a~~~l~~~~g~~~i~sn~d~~~~~~~~~~~~~~~~~~~~~~-~~~~~e~~~~gKP~p~~~~~a~~~lgv~~~~vl~ 307 (366)
.+.+.+..+. ....|+||..... .. .......+..+|. .....+.....||+|++|+.+++++|++|++|++
T Consensus 92 gv~~~L~~L~---~~~~ivTn~~~~~-~~---~~l~~~~l~~~F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~~p~~~l~ 164 (221)
T PRK10563 92 GANALLESIT---VPMCVVSNGPVSK-MQ---HSLGKTGMLHYFPDKLFSGYDIQRWKPDPALMFHAAEAMNVNVENCIL 164 (221)
T ss_pred CHHHHHHHcC---CCEEEEeCCcHHH-HH---HHHHhcChHHhCcceEeeHHhcCCCCCChHHHHHHHHHcCCCHHHeEE
Confidence 3444444442 3456677765421 11 1112222334442 2344445556899999999999999999999999
Q ss_pred EcCCchhhHHHHHHcCCcEEEEecCCCCcccccCCCCCCCCCEEECChhHHHHHHH
Q 017785 308 VGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKA 363 (366)
Q Consensus 308 VGDs~~~Di~~a~~aG~~tv~V~~G~~~~~~l~~~~~~~~pd~v~~sl~~l~~~~~ 363 (366)
|||++ +||++|+++|+++|++.++....+ .. ..++.+++++.||.+++.
T Consensus 165 igDs~-~di~aA~~aG~~~i~~~~~~~~~~-~~-----~~~~~~~~~~~~l~~~~~ 213 (221)
T PRK10563 165 VDDSS-AGAQSGIAAGMEVFYFCADPHNKP-ID-----HPLVTTFTDLAQLPELWK 213 (221)
T ss_pred EeCcH-hhHHHHHHCCCEEEEECCCCCCcc-hh-----hhhhHHHHHHHHHHHHHH
Confidence 99998 999999999999999976544322 21 246777899999887664
No 38
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=99.77 E-value=2.1e-17 Score=144.65 Aligned_cols=76 Identities=21% Similarity=0.295 Sum_probs=66.2
Q ss_pred cCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEecCCCCcccccCCCCCCCC--CEEECChhHHHH
Q 017785 283 VGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQP--DFYTNKISDFLS 360 (366)
Q Consensus 283 ~gKP~p~~~~~a~~~lgv~~~~vl~VGDs~~~Di~~a~~aG~~tv~V~~G~~~~~~l~~~~~~~~p--d~v~~sl~~l~~ 360 (366)
.+||+|.+|..+++++|+++++|+||||++ +|+++|+++|+.+++|.+|....+... ..| +++++++.++.+
T Consensus 101 ~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~-~Di~~A~~aG~~~i~v~~g~~~~~~~~-----~~~~~~~ii~~l~el~~ 174 (181)
T PRK08942 101 CRKPKPGMLLSIAERLNIDLAGSPMVGDSL-RDLQAAAAAGVTPVLVRTGKGVTTLAE-----GAAPGTWVLDSLADLPQ 174 (181)
T ss_pred CCCCCHHHHHHHHHHcCCChhhEEEEeCCH-HHHHHHHHCCCeEEEEcCCCCchhhhc-----ccCCCceeecCHHHHHH
Confidence 389999999999999999999999999997 999999999999999999875433322 345 999999999998
Q ss_pred HHHh
Q 017785 361 LKAA 364 (366)
Q Consensus 361 ~~~~ 364 (366)
++..
T Consensus 175 ~l~~ 178 (181)
T PRK08942 175 ALKK 178 (181)
T ss_pred HHHh
Confidence 8753
No 39
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=99.77 E-value=4.1e-18 Score=153.63 Aligned_cols=125 Identities=19% Similarity=0.223 Sum_probs=92.4
Q ss_pred HHhHHHHHHHHHcCCCcEEEEecCCceeecCCCccccCCCccceeeeeeecCcccccCCCcHHHHHHHHHHc-CCCCCcE
Q 017785 227 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKF-GIQKSQI 305 (366)
Q Consensus 227 y~~l~~a~~~l~~~~g~~~i~sn~d~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~gKP~p~~~~~a~~~l-gv~~~~v 305 (366)
++...+.+..++.. ....++||..... .. .......+..+|....+.+.....||+|++|..+++++ |++|++|
T Consensus 99 ~~g~~~~L~~l~~~-~~~~i~Sn~~~~~-~~---~~l~~~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~ 173 (224)
T TIGR02254 99 LPGAFELMENLQQK-FRLYIVTNGVRET-QY---KRLRKSGLFPFFDDIFVSEDAGIQKPDKEIFNYALERMPKFSKEEV 173 (224)
T ss_pred CccHHHHHHHHHhc-CcEEEEeCCchHH-HH---HHHHHCCcHhhcCEEEEcCccCCCCCCHHHHHHHHHHhcCCCchhe
Confidence 45567777777776 6678888875422 11 11112223344555555666667899999999999999 9999999
Q ss_pred EEEcCCchhhHHHHHHcCCcEEEEecCCCCcccccCCCCCCCCCEEECChhHHHHHH
Q 017785 306 CMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLK 362 (366)
Q Consensus 306 l~VGDs~~~Di~~a~~aG~~tv~V~~G~~~~~~l~~~~~~~~pd~v~~sl~~l~~~~ 362 (366)
++|||++.+|+++|+++||++|++.++..... . ...|+++++++.||.+++
T Consensus 174 v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~--~----~~~~~~~~~~~~el~~~~ 224 (224)
T TIGR02254 174 LMIGDSLTADIKGGQNAGLDTCWMNPDMHPNP--D----DIIPTYEIRSLEELYEIL 224 (224)
T ss_pred EEECCCcHHHHHHHHHCCCcEEEECCCCCCCC--C----CCCCceEECCHHHHHhhC
Confidence 99999964799999999999999988754421 1 247999999999998753
No 40
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=99.76 E-value=2.9e-19 Score=156.48 Aligned_cols=61 Identities=18% Similarity=0.145 Sum_probs=52.5
Q ss_pred ceeeeeeecCcccccCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEe
Q 017785 269 VGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVL 330 (366)
Q Consensus 269 ~~~~~~~~~~e~~~~gKP~p~~~~~a~~~lgv~~~~vl~VGDs~~~Di~~a~~aG~~tv~V~ 330 (366)
...|....+.+....+||+|++|..++++++++|++|++|||++ +|+++|+++||++|+|.
T Consensus 125 ~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~v~vgD~~-~di~aA~~aG~~~i~v~ 185 (185)
T TIGR01990 125 IDYFDAIVDPAEIKKGKPDPEIFLAAAEGLGVSPSECIGIEDAQ-AGIEAIKAAGMFAVGVG 185 (185)
T ss_pred HhhCcEEEehhhcCCCCCChHHHHHHHHHcCCCHHHeEEEecCH-HHHHHHHHcCCEEEecC
Confidence 34445555555666799999999999999999999999999997 99999999999999873
No 41
>PRK09449 dUMP phosphatase; Provisional
Probab=99.75 E-value=1.5e-17 Score=150.38 Aligned_cols=126 Identities=23% Similarity=0.220 Sum_probs=91.1
Q ss_pred HHhHHHHHHHHHcCCCcEEEEecCCceeecCCCccccCCCccceeeeeeecCcccccCCCcHHHHHHHHHHcCCC-CCcE
Q 017785 227 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQ-KSQI 305 (366)
Q Consensus 227 y~~l~~a~~~l~~~~g~~~i~sn~d~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~gKP~p~~~~~a~~~lgv~-~~~v 305 (366)
++.+.+.+..++. .....++||...... . .......+..+|+.....+.....||+|++|..+++++|+. +++|
T Consensus 97 ~~g~~~~L~~L~~-~~~~~i~Tn~~~~~~-~---~~l~~~~l~~~fd~v~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~ 171 (224)
T PRK09449 97 LPGAVELLNALRG-KVKMGIITNGFTELQ-Q---VRLERTGLRDYFDLLVISEQVGVAKPDVAIFDYALEQMGNPDRSRV 171 (224)
T ss_pred CccHHHHHHHHHh-CCeEEEEeCCcHHHH-H---HHHHhCChHHHcCEEEEECccCCCCCCHHHHHHHHHHcCCCCcccE
Confidence 5567788888873 455778888754211 1 11122223345555566666667999999999999999985 4899
Q ss_pred EEEcCCchhhHHHHHHcCCcEEEEecCCCCcccccCCCCCCCCCEEECChhHHHHHHH
Q 017785 306 CMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKA 363 (366)
Q Consensus 306 l~VGDs~~~Di~~a~~aG~~tv~V~~G~~~~~~l~~~~~~~~pd~v~~sl~~l~~~~~ 363 (366)
++|||++.+|+++|+++||++|++.++... ... ...||++++++.+|.++++
T Consensus 172 ~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~--~~~----~~~~~~~i~~~~el~~~l~ 223 (224)
T PRK09449 172 LMVGDNLHSDILGGINAGIDTCWLNAHGRE--QPE----GIAPTYQVSSLSELEQLLC 223 (224)
T ss_pred EEEcCCcHHHHHHHHHCCCcEEEECCCCCC--CCC----CCCCeEEECCHHHHHHHHh
Confidence 999999746999999999999999754221 111 1369999999999998764
No 42
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=99.75 E-value=2.6e-18 Score=155.48 Aligned_cols=124 Identities=9% Similarity=-0.025 Sum_probs=83.0
Q ss_pred HHhHHHHHHHHHcCCCcEEEEecCCceeecCCCccccCCCccceeeeeeecCcccccCCCcHHHHHHHHHHcCCCCCcEE
Q 017785 227 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQIC 306 (366)
Q Consensus 227 y~~l~~a~~~l~~~~g~~~i~sn~d~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~gKP~p~~~~~a~~~lgv~~~~vl 306 (366)
++.+.+.+..+++.+....++||...... . .......+..+|....+.+....+||+|++|+.+++++|++|++|+
T Consensus 95 ~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~-~---~~l~~~~l~~~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l 170 (224)
T PRK14988 95 REDTVPFLEALKASGKRRILLTNAHPHNL-A---VKLEHTGLDAHLDLLLSTHTFGYPKEDQRLWQAVAEHTGLKAERTL 170 (224)
T ss_pred CCCHHHHHHHHHhCCCeEEEEeCcCHHHH-H---HHHHHCCcHHHCCEEEEeeeCCCCCCCHHHHHHHHHHcCCChHHEE
Confidence 44566666677665445677787654211 1 1111122344555555666666799999999999999999999999
Q ss_pred EEcCCchhhHHHHHHcCCcE-EEEecCCCCcccccCCCCCCCCCEEECChhHHHHHHH
Q 017785 307 MVGDRLDTDILFGQNGGCKT-LLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKA 363 (366)
Q Consensus 307 ~VGDs~~~Di~~a~~aG~~t-v~V~~G~~~~~~l~~~~~~~~pd~v~~sl~~l~~~~~ 363 (366)
+|||++ .|+++|+++||++ ++|.++...... .+.....+++++.+++.
T Consensus 171 ~igDs~-~di~aA~~aG~~~~~~v~~~~~~~~~--------~~~~~~~~~~~~~~~~~ 219 (224)
T PRK14988 171 FIDDSE-PILDAAAQFGIRYCLGVTNPDSGIAE--------KQYQRHPSLNDYRRLIP 219 (224)
T ss_pred EEcCCH-HHHHHHHHcCCeEEEEEeCCCCCccc--------hhccCCCcHHHHHHHhh
Confidence 999998 9999999999985 668886654433 23333455555554443
No 43
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=99.75 E-value=2.9e-18 Score=185.22 Aligned_cols=82 Identities=17% Similarity=0.287 Sum_probs=70.6
Q ss_pred eeeeeecCcccccCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEecCCCCcccccCCCCCCCCCE
Q 017785 271 AFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDF 350 (366)
Q Consensus 271 ~~~~~~~~e~~~~gKP~p~~~~~a~~~lgv~~~~vl~VGDs~~~Di~~a~~aG~~tv~V~~G~~~~~~l~~~~~~~~pd~ 350 (366)
+|....+.+....+||+|++|+.+++++|++|++|++|||++ .|+++|+++||++|+|.++. ..+++.. ..|++
T Consensus 204 ~Fd~iv~~~~~~~~KP~Pe~~~~a~~~lgv~p~e~v~IgDs~-~Di~AA~~aGm~~I~v~~~~-~~~~L~~----~~a~~ 277 (1057)
T PLN02919 204 MFDAIVSADAFENLKPAPDIFLAAAKILGVPTSECVVIEDAL-AGVQAARAAGMRCIAVTTTL-SEEILKD----AGPSL 277 (1057)
T ss_pred HCCEEEECcccccCCCCHHHHHHHHHHcCcCcccEEEEcCCH-HHHHHHHHcCCEEEEECCCC-CHHHHhh----CCCCE
Confidence 344555566666799999999999999999999999999998 99999999999999999986 4455544 58999
Q ss_pred EECChhHH
Q 017785 351 YTNKISDF 358 (366)
Q Consensus 351 v~~sl~~l 358 (366)
+++++.++
T Consensus 278 vi~~l~el 285 (1057)
T PLN02919 278 IRKDIGNI 285 (1057)
T ss_pred EECChHHC
Confidence 99999996
No 44
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=99.74 E-value=4.4e-18 Score=169.88 Aligned_cols=122 Identities=17% Similarity=0.163 Sum_probs=82.0
Q ss_pred hHHHHHHHHHcCCCcEEEEecCCceeecCCCccccCCCccceeeeeeecCcccccCCCcHHHHHHHHHHcCCCCCcEEEE
Q 017785 229 KVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMV 308 (366)
Q Consensus 229 ~l~~a~~~l~~~~g~~~i~sn~d~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~gKP~p~~~~~a~~~lgv~~~~vl~V 308 (366)
...+.+..+++.+....|+||.....- . .......+..+|....+.+.. ..||+|++|..++++++ |++|++|
T Consensus 334 G~~e~L~~Lk~~g~~l~IvS~~~~~~~-~---~~l~~~~l~~~f~~i~~~d~v-~~~~kP~~~~~al~~l~--~~~~v~V 406 (459)
T PRK06698 334 NVKEIFTYIKENNCSIYIASNGLTEYL-R---AIVSYYDLDQWVTETFSIEQI-NSLNKSDLVKSILNKYD--IKEAAVV 406 (459)
T ss_pred CHHHHHHHHHHCCCeEEEEeCCchHHH-H---HHHHHCCcHhhcceeEecCCC-CCCCCcHHHHHHHHhcC--cceEEEE
Confidence 344455555443333556666554221 1 111111223344444444443 24788899999999875 6899999
Q ss_pred cCCchhhHHHHHHcCCcEEEEecCCCCcccccCCCCCCCCCEEECChhHHHHHHHh
Q 017785 309 GDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKAA 364 (366)
Q Consensus 309 GDs~~~Di~~a~~aG~~tv~V~~G~~~~~~l~~~~~~~~pd~v~~sl~~l~~~~~~ 364 (366)
||++ +|+++|+++||.+|+|.+|....+.+ ..||++++++.++.+++..
T Consensus 407 GDs~-~Di~aAk~AG~~~I~v~~~~~~~~~~------~~~d~~i~~l~el~~~l~~ 455 (459)
T PRK06698 407 GDRL-SDINAAKDNGLIAIGCNFDFAQEDEL------AQADIVIDDLLELKGILST 455 (459)
T ss_pred eCCH-HHHHHHHHCCCeEEEEeCCCCccccc------CCCCEEeCCHHHHHHHHHH
Confidence 9998 99999999999999999987654443 2599999999999988754
No 45
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=99.74 E-value=1.6e-18 Score=152.33 Aligned_cols=93 Identities=14% Similarity=0.070 Sum_probs=68.5
Q ss_pred HHHHHHHcCCCcEEEEecCCceeecCCCccccCCCccceeeeeeecCcccccCCCcHHHHHHHHHHcCCCCCcEEEEcCC
Q 017785 232 YGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDR 311 (366)
Q Consensus 232 ~a~~~l~~~~g~~~i~sn~d~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~gKP~p~~~~~a~~~lgv~~~~vl~VGDs 311 (366)
+.+..+++. ....|+||..... .........+..+|....+.+.....||+|++|+.+++++|++|++|++|||+
T Consensus 94 e~L~~L~~~-~~l~I~T~~~~~~----~~~~l~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~igDs 168 (188)
T PRK10725 94 EVVKAWHGR-RPMAVGTGSESAI----AEALLAHLGLRRYFDAVVAADDVQHHKPAPDTFLRCAQLMGVQPTQCVVFEDA 168 (188)
T ss_pred HHHHHHHhC-CCEEEEcCCchHH----HHHHHHhCCcHhHceEEEehhhccCCCCChHHHHHHHHHcCCCHHHeEEEecc
Confidence 344455443 4567777765421 11122223344556666667777779999999999999999999999999999
Q ss_pred chhhHHHHHHcCCcEEEEe
Q 017785 312 LDTDILFGQNGGCKTLLVL 330 (366)
Q Consensus 312 ~~~Di~~a~~aG~~tv~V~ 330 (366)
. +|+++|+++|+++|+|.
T Consensus 169 ~-~di~aA~~aG~~~i~~~ 186 (188)
T PRK10725 169 D-FGIQAARAAGMDAVDVR 186 (188)
T ss_pred H-hhHHHHHHCCCEEEeec
Confidence 7 99999999999999875
No 46
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=99.73 E-value=1.8e-18 Score=151.50 Aligned_cols=95 Identities=11% Similarity=0.114 Sum_probs=65.2
Q ss_pred HhHHHHHHHHHcCCCcEEEEecCCceeecCCCccccCCCccceeeeeeecCcccccCCCcHHHHHHHHHHcCCCCCcEEE
Q 017785 228 YKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICM 307 (366)
Q Consensus 228 ~~l~~a~~~l~~~~g~~~i~sn~d~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~gKP~p~~~~~a~~~lgv~~~~vl~ 307 (366)
+.+.+.+..+++......++||.... ........+..++....+.+.....||+|++|..+++++|+++++|++
T Consensus 91 ~g~~~~l~~l~~~g~~i~i~S~~~~~------~~~l~~~~l~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~ 164 (185)
T TIGR02009 91 PGIENFLKRLKKKGIAVGLGSSSKNA------DRILAKLGLTDYFDAIVDADEVKEGKPHPETFLLAAELLGVSPNECVV 164 (185)
T ss_pred cCHHHHHHHHHHcCCeEEEEeCchhH------HHHHHHcChHHHCCEeeehhhCCCCCCChHHHHHHHHHcCCCHHHeEE
Confidence 33455555555433334555655211 111111223344555555566666999999999999999999999999
Q ss_pred EcCCchhhHHHHHHcCCcEEEE
Q 017785 308 VGDRLDTDILFGQNGGCKTLLV 329 (366)
Q Consensus 308 VGDs~~~Di~~a~~aG~~tv~V 329 (366)
|||+. +|+++|+++|+++|+|
T Consensus 165 IgD~~-~di~aA~~~G~~~i~v 185 (185)
T TIGR02009 165 FEDAL-AGVQAARAAGMFAVAV 185 (185)
T ss_pred EeCcH-hhHHHHHHCCCeEeeC
Confidence 99997 9999999999999975
No 47
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.72 E-value=6.2e-17 Score=146.46 Aligned_cols=128 Identities=23% Similarity=0.288 Sum_probs=97.3
Q ss_pred HHhHHHHHHHHHcCCCcEEEEecCCceeecCCCccccCCCccceeeeeeecCcccccCCCcHHHHHHHHHHcCCCCCcEE
Q 017785 227 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQIC 306 (366)
Q Consensus 227 y~~l~~a~~~l~~~~g~~~i~sn~d~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~gKP~p~~~~~a~~~lgv~~~~vl 306 (366)
|+...+.+..+... ....+.||..... .. ..+...| +.+.|..+...+.....||+|.+|.++++++|++|++|+
T Consensus 101 ~~~~~~~L~~l~~~-~~l~ilTNg~~~~-~~--~~l~~~g-l~~~Fd~v~~s~~~g~~KP~~~~f~~~~~~~g~~p~~~l 175 (229)
T COG1011 101 YPEALEALKELGKK-YKLGILTNGARPH-QE--RKLRQLG-LLDYFDAVFISEDVGVAKPDPEIFEYALEKLGVPPEEAL 175 (229)
T ss_pred ChhHHHHHHHHHhh-ccEEEEeCCChHH-HH--HHHHHcC-ChhhhheEEEecccccCCCCcHHHHHHHHHcCCCcceEE
Confidence 55666777776654 4478889964321 11 1122223 667777777777777899999999999999999999999
Q ss_pred EEcCCchhhHHHHHHcCCcEEEEecCCCCcccccCCCCCCCCCEEECChhHHHHHHHh
Q 017785 307 MVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKAA 364 (366)
Q Consensus 307 ~VGDs~~~Di~~a~~aG~~tv~V~~G~~~~~~l~~~~~~~~pd~v~~sl~~l~~~~~~ 364 (366)
+|||++.|||.+|+++||++|||..+.... .+ ....|++.+.++.++.+++..
T Consensus 176 ~VgD~~~~di~gA~~~G~~~vwi~~~~~~~--~~---~~~~~~~~i~~l~~l~~~~~~ 228 (229)
T COG1011 176 FVGDSLENDILGARALGMKTVWINRGGKPL--PD---ALEAPDYEISSLAELLDLLER 228 (229)
T ss_pred EECCChhhhhHHHHhcCcEEEEECCCCCCC--CC---CccCCceEEcCHHHHHHHHhh
Confidence 999999999999999999999998876543 11 114699999999999998764
No 48
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=99.71 E-value=4.7e-18 Score=150.76 Aligned_cols=102 Identities=18% Similarity=0.141 Sum_probs=74.3
Q ss_pred HHhHHHHHHHHHcCCCcEEEEecCCceeecCCCccccCCCccceeeeeeecCcccccCCCcHHHHHHHHHHcCCCCCcEE
Q 017785 227 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQIC 306 (366)
Q Consensus 227 y~~l~~a~~~l~~~~g~~~i~sn~d~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~gKP~p~~~~~a~~~lgv~~~~vl 306 (366)
++.+.+.+..++++.....++||...... .......+ +..+|......+.....||+|++|+.+++++|++|++|+
T Consensus 94 ~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~-~~~l~~~g---l~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~~~~ 169 (198)
T TIGR01428 94 HPDVPAGLRALKERGYRLAILSNGSPAML-KSLVKHAG---LDDPFDAVLSADAVRAYKPAPQVYQLALEALGVPPDEVL 169 (198)
T ss_pred CCCHHHHHHHHHHCCCeEEEEeCCCHHHH-HHHHHHCC---ChhhhheeEehhhcCCCCCCHHHHHHHHHHhCCChhhEE
Confidence 44566666677654444677788765321 11111112 334455556666667799999999999999999999999
Q ss_pred EEcCCchhhHHHHHHcCCcEEEEecCC
Q 017785 307 MVGDRLDTDILFGQNGGCKTLLVLSGV 333 (366)
Q Consensus 307 ~VGDs~~~Di~~a~~aG~~tv~V~~G~ 333 (366)
+|||++ +|+++|+++||++|||..+.
T Consensus 170 ~vgD~~-~Di~~A~~~G~~~i~v~r~~ 195 (198)
T TIGR01428 170 FVASNP-WDLGGAKKFGFKTAWVNRPG 195 (198)
T ss_pred EEeCCH-HHHHHHHHCCCcEEEecCCC
Confidence 999998 99999999999999998743
No 49
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=99.71 E-value=6.9e-17 Score=143.78 Aligned_cols=97 Identities=19% Similarity=0.138 Sum_probs=70.9
Q ss_pred HHhHHHHHHHHHcCCCcEEEEecCCceeecCCCccccCCCccceeeeeeecCcccccCCCcHHHHHHHHHHcCCCCCcEE
Q 017785 227 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQIC 306 (366)
Q Consensus 227 y~~l~~a~~~l~~~~g~~~i~sn~d~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~gKP~p~~~~~a~~~lgv~~~~vl 306 (366)
++.+.+.+..+++......|+||.+... . .......+..++....+.+....+||+|++|+++++++|++|++|+
T Consensus 107 ~~g~~~~l~~L~~~g~~~~i~Sn~~~~~--~---~~l~~~~l~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~~~~~~ 181 (203)
T TIGR02252 107 YPDAIKLLKDLRERGLILGVISNFDSRL--R---GLLEALGLLEYFDFVVTSYEVGAEKPDPKIFQEALERAGISPEEAL 181 (203)
T ss_pred CcCHHHHHHHHHHCCCEEEEEeCCchhH--H---HHHHHCCcHHhcceEEeecccCCCCCCHHHHHHHHHHcCCChhHEE
Confidence 4556777777776544567888876421 1 1111122334455555555666799999999999999999999999
Q ss_pred EEcCCchhhHHHHHHcCCcEEE
Q 017785 307 MVGDRLDTDILFGQNGGCKTLL 328 (366)
Q Consensus 307 ~VGDs~~~Di~~a~~aG~~tv~ 328 (366)
+|||++.+||++|+++||++||
T Consensus 182 ~IgD~~~~Di~~A~~aG~~~i~ 203 (203)
T TIGR02252 182 HIGDSLRNDYQGARAAGWRALL 203 (203)
T ss_pred EECCCchHHHHHHHHcCCeeeC
Confidence 9999975899999999999985
No 50
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=99.70 E-value=4e-17 Score=121.85 Aligned_cols=74 Identities=35% Similarity=0.581 Sum_probs=67.5
Q ss_pred cCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEecCCCCcccccCCCCCCCCCEEECChhHH
Q 017785 283 VGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDF 358 (366)
Q Consensus 283 ~gKP~p~~~~~a~~~lgv~~~~vl~VGDs~~~Di~~a~~aG~~tv~V~~G~~~~~~l~~~~~~~~pd~v~~sl~~l 358 (366)
+|||+|.+|..+++++++++++|+||||++.+||++|+++|+.+|+|++|....+.+.. ....||||+++|.|+
T Consensus 2 ~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~--~~~~pd~vv~~l~e~ 75 (75)
T PF13242_consen 2 CGKPSPGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEK--AEHKPDYVVDDLKEA 75 (75)
T ss_dssp CSTTSHHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHH--SSSTTSEEESSGGGH
T ss_pred CCCCcHHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhc--cCCCCCEEECCHHhC
Confidence 59999999999999999999999999999559999999999999999999998877653 236899999999985
No 51
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=99.69 E-value=8.3e-17 Score=143.41 Aligned_cols=206 Identities=18% Similarity=0.184 Sum_probs=134.0
Q ss_pred ccCcEEEEecceeEEeCCEeCCCHHHHHHHHHHCCCeE--EEEeCCCCCCHHHHHHHH-HhcCCCCCcCceeccHHHHHH
Q 017785 81 DSVETFIFDCDGVIWKGDKLIDGVPETLDMLRSKGKRL--VFVTNNSTKSRKQYGKKF-ETLGLTVTEEEIFASSFAAAA 157 (366)
Q Consensus 81 ~~ik~viFDiDGTL~d~~~~~~~~~~ai~~l~~~g~~~--~~~Tn~sg~~~~~~~~~l-~~lG~~~~~~~i~~~~~~~~~ 157 (366)
..+.+++||+||||+|++.++.. .+...+++.|.++ .+..-..|+...+.++.+ ..++.+.+.+++.........
T Consensus 8 ~~~~~~lfD~dG~lvdte~~y~~--~~~~~~~~ygk~~~~~~~~~~mG~~~~eaa~~~~~~~~dp~s~ee~~~e~~~~~~ 85 (222)
T KOG2914|consen 8 LKVSACLFDMDGTLVDTEDLYTE--AWQELLDRYGKPYPWDVKVKSMGKRTSEAARLFVKKLPDPVSREEFNKEEEEILD 85 (222)
T ss_pred cceeeEEEecCCcEEecHHHHHH--HHHHHHHHcCCCChHHHHHHHcCCCHHHHHHHHHhhcCCCCCHHHHHHHHHHHHH
Confidence 35779999999999999988743 3445556666533 222333477777777766 678888887766654433222
Q ss_pred HHHhcCCCCCCeEEEecccchHHHHHHcCCeeeCCCCCCCcccccCCCcccCCCCCccEEEEEccCCCCHHhHHHHHHHH
Q 017785 158 YLKSIDFPKDKKVYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYKVQYGTLCI 237 (366)
Q Consensus 158 ~l~~~~~~~~~~~~~~g~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~y~~l~~a~~~l 237 (366)
-+- ......+|...+.++|...|+++ ++.....+.-..-++.. ...+
T Consensus 86 ~~~------~~~~~~PGa~kLv~~L~~~gip~--------------------------alat~s~~~~~~~k~~~-~~~~ 132 (222)
T KOG2914|consen 86 RLF------MNSILMPGAEKLVNHLKNNGIPV--------------------------ALATSSTSASFELKISR-HEDI 132 (222)
T ss_pred Hhc------cccccCCcHHHHHHHHHhCCCCe--------------------------eEEecCCcccHHHHHHH-hhHH
Confidence 211 13456779999999999999876 23332222211111111 0001
Q ss_pred HcCCCcEEEEecCCceeecCCCccccCCCccceeeeee--ecCcccccCCCcHHHHHHHHHHcCCCC-CcEEEEcCCchh
Q 017785 238 RENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGS--TQREPLVVGKPSTFMMDYLANKFGIQK-SQICMVGDRLDT 314 (366)
Q Consensus 238 ~~~~g~~~i~sn~d~~~~~~~~~~~~~~~~~~~~~~~~--~~~e~~~~gKP~p~~~~~a~~~lgv~~-~~vl~VGDs~~~ 314 (366)
...|... .+...+..|||+|++|..+++++|..+ +.|++|+|++ .
T Consensus 133 -------------------------------~~~f~~~v~~d~~~v~~gKP~Pdi~l~A~~~l~~~~~~k~lVfeds~-~ 180 (222)
T KOG2914|consen 133 -------------------------------FKNFSHVVLGDDPEVKNGKPDPDIYLKAAKRLGVPPPSKCLVFEDSP-V 180 (222)
T ss_pred -------------------------------HHhcCCCeecCCccccCCCCCchHHHHHHHhcCCCCccceEEECCCH-H
Confidence 1111111 122334559999999999999999998 9999999999 9
Q ss_pred hHHHHHHcCCcEEEEecCCCCcccccCCCCCCCCCEEECChhHHH
Q 017785 315 DILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFL 359 (366)
Q Consensus 315 Di~~a~~aG~~tv~V~~G~~~~~~l~~~~~~~~pd~v~~sl~~l~ 359 (366)
++++|+++||++|+|.+..- +... ...++.+++++.+..
T Consensus 181 Gv~aa~aagm~vi~v~~~~~--~~~~----~~~~~~~~~~~~~~~ 219 (222)
T KOG2914|consen 181 GVQAAKAAGMQVVGVATPDL--SNLF----SAGATLILESLEDFK 219 (222)
T ss_pred HHHHHHhcCCeEEEecCCCc--chhh----hhccceecccccccC
Confidence 99999999999999998221 1111 146888888887653
No 52
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=99.69 E-value=4.4e-16 Score=131.68 Aligned_cols=48 Identities=29% Similarity=0.512 Sum_probs=46.1
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEecC
Q 017785 284 GKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSG 332 (366)
Q Consensus 284 gKP~p~~~~~a~~~lgv~~~~vl~VGDs~~~Di~~a~~aG~~tv~V~~G 332 (366)
.||+|++|+.+++++|+++++|++|||+. .|+++|+++|+++|||..|
T Consensus 100 ~KP~~~~~~~~~~~~~~~~~e~i~IGDs~-~Di~~A~~~Gi~~v~i~~~ 147 (147)
T TIGR01656 100 RKPKPGLILEALKRLGVDASRSLVVGDRL-RDLQAARNAGLAAVLLVDG 147 (147)
T ss_pred CCCCHHHHHHHHHHcCCChHHEEEEcCCH-HHHHHHHHCCCCEEEecCC
Confidence 79999999999999999999999999996 9999999999999999765
No 53
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=99.69 E-value=8.1e-16 Score=127.49 Aligned_cols=46 Identities=30% Similarity=0.395 Sum_probs=43.7
Q ss_pred CCCcHHHHHHHHHHc-CCCCCcEEEEcC-CchhhHHHHHHcCCcEEEEe
Q 017785 284 GKPSTFMMDYLANKF-GIQKSQICMVGD-RLDTDILFGQNGGCKTLLVL 330 (366)
Q Consensus 284 gKP~p~~~~~a~~~l-gv~~~~vl~VGD-s~~~Di~~a~~aG~~tv~V~ 330 (366)
.||+|++|+.+++++ +++|++|++||| +. +|+.+|+++|+++|+|+
T Consensus 84 ~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~-~Di~~A~~~Gi~~i~~~ 131 (132)
T TIGR01662 84 RKPKPGMFLEALKRFNEIDPEESVYVGDQDL-TDLQAAKRAGLAFILVA 131 (132)
T ss_pred CCCChHHHHHHHHHcCCCChhheEEEcCCCc-ccHHHHHHCCCeEEEee
Confidence 799999999999999 599999999999 66 99999999999999986
No 54
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=99.68 E-value=7.5e-17 Score=144.45 Aligned_cols=109 Identities=14% Similarity=0.085 Sum_probs=76.2
Q ss_pred HHhHHHHHHHHHcCCCcEEEEecCCceeecCCCccccCCCccceeeeeeecCcccccCCCcHHHHHHHHHHcCCCCCcEE
Q 017785 227 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQIC 306 (366)
Q Consensus 227 y~~l~~a~~~l~~~~g~~~i~sn~d~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~gKP~p~~~~~a~~~lgv~~~~vl 306 (366)
|+.+.+.+..+++++....++||....... .........+...|......+.....||+|.+|+.+++++|++|++|+
T Consensus 96 ~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~--~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~g~~~~~~l 173 (211)
T TIGR02247 96 RPSMMAAIKTLRAKGFKTACITNNFPTDHS--AEEALLPGDIMALFDAVVESCLEGLRKPDPRIYQLMLERLGVAPEECV 173 (211)
T ss_pred ChhHHHHHHHHHHCCCeEEEEeCCCCccch--hhhHhhhhhhHhhCCEEEEeeecCCCCCCHHHHHHHHHHcCCCHHHeE
Confidence 566777787887654456777886542110 000111111234444444555556689999999999999999999999
Q ss_pred EEcCCchhhHHHHHHcCCcEEEEecCCCCccc
Q 017785 307 MVGDRLDTDILFGQNGGCKTLLVLSGVTSLSM 338 (366)
Q Consensus 307 ~VGDs~~~Di~~a~~aG~~tv~V~~G~~~~~~ 338 (366)
+|||+. .|+++|+++||++|+|.++....+.
T Consensus 174 ~i~D~~-~di~aA~~aG~~~i~v~~~~~~~~~ 204 (211)
T TIGR02247 174 FLDDLG-SNLKPAAALGITTIKVSDEEQAIHD 204 (211)
T ss_pred EEcCCH-HHHHHHHHcCCEEEEECCHHHHHHH
Confidence 999997 9999999999999999875444333
No 55
>PHA02597 30.2 hypothetical protein; Provisional
Probab=99.68 E-value=3.1e-16 Score=138.98 Aligned_cols=118 Identities=12% Similarity=0.082 Sum_probs=80.0
Q ss_pred HHhHHHHHHHHHcCCCcEEEEecCCceeecCCCccccCCCcc-ceeeeeeecCcccccCCCcHHHHHHHHHHcCCCCCcE
Q 017785 227 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSM-VGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQI 305 (366)
Q Consensus 227 y~~l~~a~~~l~~~~g~~~i~sn~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~e~~~~gKP~p~~~~~a~~~lgv~~~~v 305 (366)
|+.+.+.+..|++. +..+++||...... .......+...+ ..++....+.+. .||+|++|+.+++++| +++|
T Consensus 76 ~pG~~e~L~~L~~~-~~~~i~Tn~~~~~~-~~~~~~~~l~~~f~~~f~~i~~~~~---~~~kp~~~~~a~~~~~--~~~~ 148 (197)
T PHA02597 76 YDDALDVINKLKED-YDFVAVTALGDSID-ALLNRQFNLNALFPGAFSEVLMCGH---DESKEKLFIKAKEKYG--DRVV 148 (197)
T ss_pred CCCHHHHHHHHHhc-CCEEEEeCCccchh-HHHHhhCCHHHhCCCcccEEEEecc---CcccHHHHHHHHHHhC--CCcE
Confidence 45567777777664 45566677543211 101111111111 123444444454 5788999999999999 8999
Q ss_pred EEEcCCchhhHHHHHHc--CCcEEEEecCCCCcccccCCCCCCCCCEEECChhHHHH
Q 017785 306 CMVGDRLDTDILFGQNG--GCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLS 360 (366)
Q Consensus 306 l~VGDs~~~Di~~a~~a--G~~tv~V~~G~~~~~~l~~~~~~~~pd~v~~sl~~l~~ 360 (366)
++|||+. +|+++|+++ ||++|+|.+|.. +. ...++|.++|+.|+..
T Consensus 149 v~vgDs~-~di~aA~~a~~Gi~~i~~~~~~~--~~------~~~~~~~~~~~~~~~~ 196 (197)
T PHA02597 149 CFVDDLA-HNLDAAHEALSQLPVIHMLRGER--DH------IPKLAHRVKSWNDIEN 196 (197)
T ss_pred EEeCCCH-HHHHHHHHHHcCCcEEEecchhh--cc------ccchhhhhccHHHHhc
Confidence 9999998 999999999 999999999853 22 1357899999999863
No 56
>PLN02811 hydrolase
Probab=99.67 E-value=4.9e-17 Score=146.75 Aligned_cols=83 Identities=16% Similarity=0.196 Sum_probs=68.4
Q ss_pred eeeeeeecCc--ccccCCCcHHHHHHHHHHcC---CCCCcEEEEcCCchhhHHHHHHcCCcEEEEecCCCCcccccCCCC
Q 017785 270 GAFVGSTQRE--PLVVGKPSTFMMDYLANKFG---IQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNN 344 (366)
Q Consensus 270 ~~~~~~~~~e--~~~~gKP~p~~~~~a~~~lg---v~~~~vl~VGDs~~~Di~~a~~aG~~tv~V~~G~~~~~~l~~~~~ 344 (366)
.++....+.+ ....+||+|++|..+++++| ++|++|++|||+. .|+++|+++|+++|+|.++....+..
T Consensus 120 ~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~~v~IgDs~-~di~aA~~aG~~~i~v~~~~~~~~~~----- 193 (220)
T PLN02811 120 SLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDGPVDPGKVLVFEDAP-SGVEAAKNAGMSVVMVPDPRLDKSYC----- 193 (220)
T ss_pred hhCCEEEECChhhccCCCCCcHHHHHHHHHhCCCCCCccceEEEeccH-hhHHHHHHCCCeEEEEeCCCCcHhhh-----
Confidence 3444444455 45568999999999999997 9999999999998 99999999999999999886554433
Q ss_pred CCCCCEEECChhHHH
Q 017785 345 SIQPDFYTNKISDFL 359 (366)
Q Consensus 345 ~~~pd~v~~sl~~l~ 359 (366)
..||++++++.++.
T Consensus 194 -~~~d~vi~~~~e~~ 207 (220)
T PLN02811 194 -KGADQVLSSLLDFK 207 (220)
T ss_pred -hchhhHhcCHhhCC
Confidence 26999999999864
No 57
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=99.64 E-value=4.2e-16 Score=144.88 Aligned_cols=249 Identities=14% Similarity=0.134 Sum_probs=126.5
Q ss_pred cCcEEEEecceeEEeCC-EeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCCCCcCceeccHHHHHHHHH
Q 017785 82 SVETFIFDCDGVIWKGD-KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLK 160 (366)
Q Consensus 82 ~ik~viFDiDGTL~d~~-~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~~~~~~i~~~~~~~~~~l~ 160 (366)
.+|+|+||+||||++++ .+.+.+.++|++++++|+.++++| ||+...+...+++++++. .++..+++......
T Consensus 2 ~~kli~~DlDGTLl~~~~~i~~~~~~ai~~~~~~G~~~~iaT---GR~~~~~~~~~~~l~~~~---~~I~~NGa~i~d~~ 75 (272)
T PRK10530 2 TYRVIALDLDGTLLTPKKTILPESLEALARAREAGYKVIIVT---GRHHVAIHPFYQALALDT---PAICCNGTYLYDYQ 75 (272)
T ss_pred CccEEEEeCCCceECCCCccCHHHHHHHHHHHHCCCEEEEEc---CCChHHHHHHHHhcCCCC---CEEEcCCcEEEecC
Confidence 37899999999999865 477779999999999999999999 899988888888888753 24555543321100
Q ss_pred hcCCCCCCeEEEe---c---ccchHHHHHHcCCeeeCCCCCCCcccccCC-CcccCCCCCccEEEEEccCCCCHHhHHHH
Q 017785 161 SIDFPKDKKVYVV---G---EDGILKELELAGFQYLGGPEDGGKKIELKP-GFLMEHDKDVGAVVVGFDRYFNYYKVQYG 233 (366)
Q Consensus 161 ~~~~~~~~~~~~~---g---~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~y~~l~~a 233 (366)
+.++..- . ...+.+.+++.++.......+.. +.... ..+... .....-. .......+..+...
T Consensus 76 ------~~~~l~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~ 145 (272)
T PRK10530 76 ------AKKVLEADPLPVQQALQVIEMLDEHQIHGLMYVDDAM--LYEHPTGHVIRT-LNWAQTL-PPEQRPTFTQVDSL 145 (272)
T ss_pred ------CCEEEEecCCCHHHHHHHHHHHHhCCcEEEEEcCCce--EecCchHHHHHH-hhhhhcc-chhcccceEEcccH
Confidence 1111110 0 12345555565554321111100 00000 000000 0000000 00000001111111
Q ss_pred HHHHHcCCCcEEEEecCCceee-cCCCccccCCCccceeeeeeecCcccccCCCcHHHHHHHHHHcCCCCCcEEEEcCCc
Q 017785 234 TLCIRENPGCLFIATNRDAVTH-LTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRL 312 (366)
Q Consensus 234 ~~~l~~~~g~~~i~sn~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~e~~~~gKP~p~~~~~a~~~lgv~~~~vl~VGDs~ 312 (366)
...+........++++...... ......+.....+..........+....+..++..++.+++++|+++++|++|||+.
T Consensus 146 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~gi~~~e~i~~GD~~ 225 (272)
T PRK10530 146 AQAARQVNAIWKFALTHEDLPQLQHFAKHVEHELGLECEWSWHDQVDIARKGNSKGKRLTQWVEAQGWSMKNVVAFGDNF 225 (272)
T ss_pred HHHHhhcCCcEEEEEecCCHHHHHHHHHHHhhhcCceEEEecCceEEEecCCCChHHHHHHHHHHcCCCHHHeEEeCCCh
Confidence 1122211222223333221000 000000000000000000001123333355567899999999999999999999997
Q ss_pred hhhHHHHHHcCCcEEEEecCCCCcccccCCCCCCCCCEEECChh
Q 017785 313 DTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKIS 356 (366)
Q Consensus 313 ~~Di~~a~~aG~~tv~V~~G~~~~~~l~~~~~~~~pd~v~~sl~ 356 (366)
||++|++.+|+ .|..|... +.+.+ .|++++++-.
T Consensus 226 -NDi~m~~~ag~---~vamgna~-~~lk~-----~Ad~v~~~n~ 259 (272)
T PRK10530 226 -NDISMLEAAGL---GVAMGNAD-DAVKA-----RADLVIGDNT 259 (272)
T ss_pred -hhHHHHHhcCc---eEEecCch-HHHHH-----hCCEEEecCC
Confidence 99999999996 44456554 44442 6899997643
No 58
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=99.63 E-value=1.7e-15 Score=134.55 Aligned_cols=109 Identities=16% Similarity=0.113 Sum_probs=77.5
Q ss_pred HHhHHHHHHHHHcCCCcEEEEecCCceeecCCCcccc-CCCccceeeeeeecCcccccCCCcHHHHHHHHHHcCCCCCcE
Q 017785 227 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWA-GGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQI 305 (366)
Q Consensus 227 y~~l~~a~~~l~~~~g~~~i~sn~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~e~~~~gKP~p~~~~~a~~~lgv~~~~v 305 (366)
++.+.+.+..+++.....+|+||...... . .+. ....+..++......+....+||+|++|+.+++++|++|++|
T Consensus 86 ~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~-~---~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~~~~p~~~ 161 (199)
T PRK09456 86 RPEVIAIMHKLREQGHRVVVLSNTNRLHT-T---FWPEEYPEVRAAADHIYLSQDLGMRKPEARIYQHVLQAEGFSAADA 161 (199)
T ss_pred CHHHHHHHHHHHhCCCcEEEEcCCchhhH-H---HHHhhchhHHHhcCEEEEecccCCCCCCHHHHHHHHHHcCCChhHe
Confidence 45566666666654445677787754210 0 010 001123344555555666679999999999999999999999
Q ss_pred EEEcCCchhhHHHHHHcCCcEEEEecCCCCccccc
Q 017785 306 CMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQ 340 (366)
Q Consensus 306 l~VGDs~~~Di~~a~~aG~~tv~V~~G~~~~~~l~ 340 (366)
++|||++ .|+++|+++||+++++..+....+.++
T Consensus 162 l~vgD~~-~di~aA~~aG~~~i~~~~~~~~~~~l~ 195 (199)
T PRK09456 162 VFFDDNA-DNIEAANALGITSILVTDKQTIPDYFA 195 (199)
T ss_pred EEeCCCH-HHHHHHHHcCCEEEEecCCccHHHHHH
Confidence 9999998 999999999999999988766555443
No 59
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=99.63 E-value=2.4e-15 Score=128.81 Aligned_cols=53 Identities=23% Similarity=0.282 Sum_probs=49.1
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEecCCCCcc
Q 017785 284 GKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLS 337 (366)
Q Consensus 284 gKP~p~~~~~a~~~lgv~~~~vl~VGDs~~~Di~~a~~aG~~tv~V~~G~~~~~ 337 (366)
.||+|.+|+.+++++++++++|+||||+. +|+++|+++||++++|.++.-.-+
T Consensus 102 ~KP~~~~~~~~~~~~~~~~~e~l~IGD~~-~Di~~A~~aGi~~i~~~~~~~~~~ 154 (161)
T TIGR01261 102 RKPKIKLLEPYLKKNLIDKARSYVIGDRE-TDMQLAENLGIRGIQYDEEELNWD 154 (161)
T ss_pred CCCCHHHHHHHHHHcCCCHHHeEEEeCCH-HHHHHHHHCCCeEEEEChhhcCHH
Confidence 79999999999999999999999999997 999999999999999998765433
No 60
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=99.61 E-value=5e-15 Score=128.26 Aligned_cols=57 Identities=30% Similarity=0.390 Sum_probs=52.8
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEecCCCCccccc
Q 017785 284 GKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQ 340 (366)
Q Consensus 284 gKP~p~~~~~a~~~lgv~~~~vl~VGDs~~~Di~~a~~aG~~tv~V~~G~~~~~~l~ 340 (366)
.||+|.+|..+++++|+++++|+||||++.+|+++|+++||.+|+|.+|....+.+.
T Consensus 90 ~KP~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~~i~v~~g~~~~~~~~ 146 (170)
T TIGR01668 90 VKPPGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSYTILVEPLVHPDQWFI 146 (170)
T ss_pred CCCChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCeEEEEccCcCCccccc
Confidence 799999999999999999999999999975799999999999999999988776554
No 61
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=99.60 E-value=2.3e-14 Score=123.29 Aligned_cols=163 Identities=26% Similarity=0.364 Sum_probs=121.0
Q ss_pred CcEEEEecceeEEeCC----------EeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCCCCcCceeccH
Q 017785 83 VETFIFDCDGVIWKGD----------KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASS 152 (366)
Q Consensus 83 ik~viFDiDGTL~d~~----------~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~~~~~~i~~~~ 152 (366)
.+++++|.||||.... .+.+++.+++.++++.|..++++||++|..+..+...
T Consensus 5 ~k~lflDRDGtin~d~~~yv~~~~~~~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~----------------- 67 (181)
T COG0241 5 QKALFLDRDGTINIDKGDYVDSLDDFQFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEA----------------- 67 (181)
T ss_pred CcEEEEcCCCceecCCCcccCcHHHhccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHH-----------------
Confidence 6799999999998644 3588899999999999999999999988776554311
Q ss_pred HHHHHHHHhcCCCCCCeEEEecccchHHHHHHcCCeeeCCCCCCCcccccCCCcccCCCCCccEEEEEccCCCCHHhHHH
Q 017785 153 FAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYKVQY 232 (366)
Q Consensus 153 ~~~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~y~~l~~ 232 (366)
++..- .+.+...|++.|+++. .+
T Consensus 68 ----~f~~~-------------~~~m~~~l~~~gv~id-------------------------~i--------------- 90 (181)
T COG0241 68 ----DFDKL-------------HNKMLKILASQGVKID-------------------------GI--------------- 90 (181)
T ss_pred ----HHHHH-------------HHHHHHHHHHcCCccc-------------------------eE---------------
Confidence 11111 2235666777777551 11
Q ss_pred HHHHHHcCCCcEEEEecCCceeecCCCccccCCCccceeeeeeecCcccccCCCcHHHHHHHHHHcCCCCCcEEEEcCCc
Q 017785 233 GTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRL 312 (366)
Q Consensus 233 a~~~l~~~~g~~~i~sn~d~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~gKP~p~~~~~a~~~lgv~~~~vl~VGDs~ 312 (366)
++|-+... +...+.||++-+++.+++++++++++.++|||++
T Consensus 91 ------------~~Cph~p~--------------------------~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~ 132 (181)
T COG0241 91 ------------LYCPHHPE--------------------------DNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRL 132 (181)
T ss_pred ------------EECCCCCC--------------------------CCCcccCCChHHHHHHHHHhCCCccceEEecCcH
Confidence 12211111 0022389999999999999999999999999998
Q ss_pred hhhHHHHHHcCCcEEEEecCCCCcccccCCCCCCCCCEEECChhHHHHHHH
Q 017785 313 DTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKA 363 (366)
Q Consensus 313 ~~Di~~a~~aG~~tv~V~~G~~~~~~l~~~~~~~~pd~v~~sl~~l~~~~~ 363 (366)
+|+++|.++|+.++.+.+|......-. ...+++++++.++..++.
T Consensus 133 -~Dlq~a~n~gi~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 177 (181)
T COG0241 133 -TDLQAAENAGIKGVLVLTGIGVTTDGA-----GRAKWVFDSLAEFANLIK 177 (181)
T ss_pred -HHHHHHHHCCCCceEEEcCcccccccc-----cccccccccHHHHHHHHH
Confidence 999999999999999999876654322 257899999998875554
No 62
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=99.59 E-value=2.9e-15 Score=131.28 Aligned_cols=95 Identities=22% Similarity=0.191 Sum_probs=68.7
Q ss_pred HHhHHHHHHHHHcCCCcEEEEecCCceeecCCCccccCCCccceeeeeeecCccccc----CCCcHHHHHHHHHHcCCCC
Q 017785 227 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVV----GKPSTFMMDYLANKFGIQK 302 (366)
Q Consensus 227 y~~l~~a~~~l~~~~g~~~i~sn~d~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~----gKP~p~~~~~a~~~lgv~~ 302 (366)
++.+.+.+..++ +..+++||..... ........+ +..+|....+.+.... .||+|++|+.+++++|++|
T Consensus 86 ~~g~~~~L~~L~---~~~~i~Tn~~~~~-~~~~l~~~g---l~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~ 158 (184)
T TIGR01993 86 DPELRNLLLRLP---GRKIIFTNGDRAH-ARRALNRLG---IEDCFDGIFCFDTANPDYLLPKPSPQAYEKALREAGVDP 158 (184)
T ss_pred CHHHHHHHHhCC---CCEEEEeCCCHHH-HHHHHHHcC---cHhhhCeEEEeecccCccCCCCCCHHHHHHHHHHhCCCc
Confidence 556666666664 4567888877532 111111222 3344555555555444 5999999999999999999
Q ss_pred CcEEEEcCCchhhHHHHHHcCCcEEEE
Q 017785 303 SQICMVGDRLDTDILFGQNGGCKTLLV 329 (366)
Q Consensus 303 ~~vl~VGDs~~~Di~~a~~aG~~tv~V 329 (366)
++|++|||++ .|+++|+++|+++|+|
T Consensus 159 ~~~l~vgD~~-~di~aA~~~G~~~i~v 184 (184)
T TIGR01993 159 ERAIFFDDSA-RNIAAAKALGMKTVLV 184 (184)
T ss_pred cceEEEeCCH-HHHHHHHHcCCEEeeC
Confidence 9999999998 9999999999999975
No 63
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=99.59 E-value=6.3e-15 Score=128.44 Aligned_cols=96 Identities=20% Similarity=0.134 Sum_probs=66.6
Q ss_pred HhHHHHHHHHHcCCCcEEEEecCCceeecCCCccccCCCccceeeeeeecCcccccCCCcHHHHHHHHHHcCCCCCcEEE
Q 017785 228 YKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICM 307 (366)
Q Consensus 228 ~~l~~a~~~l~~~~g~~~i~sn~d~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~gKP~p~~~~~a~~~lgv~~~~vl~ 307 (366)
+.+.+.+..+++......++||..... .......+ +...+......+....+||+|++|..+++++|++|++|++
T Consensus 88 ~g~~~~l~~l~~~g~~~~i~Tn~~~~~--~~~~~~~~---l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~ 162 (183)
T TIGR01509 88 PGVEPLLEALRARGKKLALLTNSPRDH--AVLVQELG---LRDLFDVVIFSGDVGRGKPDPDIYLLALKKLGLKPEECLF 162 (183)
T ss_pred cCHHHHHHHHHHCCCeEEEEeCCchHH--HHHHHhcC---CHHHCCEEEEcCCCCCCCCCHHHHHHHHHHcCCCcceEEE
Confidence 345555555554333456777766532 10000122 2233444444455567999999999999999999999999
Q ss_pred EcCCchhhHHHHHHcCCcEEEE
Q 017785 308 VGDRLDTDILFGQNGGCKTLLV 329 (366)
Q Consensus 308 VGDs~~~Di~~a~~aG~~tv~V 329 (366)
|||++ .|+++|+++|+.+|+|
T Consensus 163 vgD~~-~di~aA~~~G~~~i~v 183 (183)
T TIGR01509 163 VDDSP-AGIEAAKAAGMHTVLV 183 (183)
T ss_pred EcCCH-HHHHHHHHcCCEEEeC
Confidence 99998 9999999999999975
No 64
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=99.57 E-value=2.6e-14 Score=123.13 Aligned_cols=45 Identities=36% Similarity=0.524 Sum_probs=41.9
Q ss_pred CCCcHHHHHHHHHHcC--CCCCcEEEEcCCc-------hhhHHHHHHcCCcEEE
Q 017785 284 GKPSTFMMDYLANKFG--IQKSQICMVGDRL-------DTDILFGQNGGCKTLL 328 (366)
Q Consensus 284 gKP~p~~~~~a~~~lg--v~~~~vl~VGDs~-------~~Di~~a~~aG~~tv~ 328 (366)
.||+|.+|+++++++| +++++++||||+. .+|+++|+++|+++++
T Consensus 107 ~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~~~ 160 (166)
T TIGR01664 107 RKPMTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEFKY 160 (166)
T ss_pred CCCccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCcCC
Confidence 7999999999999999 9999999999994 3699999999999875
No 65
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.57 E-value=1.7e-14 Score=130.89 Aligned_cols=58 Identities=17% Similarity=0.196 Sum_probs=50.7
Q ss_pred cCcEEEEecceeEEeCCE-eCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCC
Q 017785 82 SVETFIFDCDGVIWKGDK-LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT 142 (366)
Q Consensus 82 ~ik~viFDiDGTL~d~~~-~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~ 142 (366)
.+|+|+||+||||+++++ +.+.+.++|++++++|++++++| ||+...+.+.++.+|++
T Consensus 2 ~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~G~~~~iaT---GR~~~~~~~~~~~l~~~ 60 (230)
T PRK01158 2 KIKAIAIDIDGTITDKDRRLSLKAVEAIRKAEKLGIPVILAT---GNVLCFARAAAKLIGTS 60 (230)
T ss_pred ceeEEEEecCCCcCCCCCccCHHHHHHHHHHHHCCCEEEEEc---CCchHHHHHHHHHhCCC
Confidence 378999999999998765 55678999999999999999999 88988888777888875
No 66
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=99.56 E-value=2.8e-15 Score=139.33 Aligned_cols=70 Identities=17% Similarity=0.271 Sum_probs=56.4
Q ss_pred cCcEEEEecceeEEeCC-EeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCCCCcCceeccHHH
Q 017785 82 SVETFIFDCDGVIWKGD-KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFA 154 (366)
Q Consensus 82 ~ik~viFDiDGTL~d~~-~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~~~~~~i~~~~~~ 154 (366)
.+|+|+||+||||++.+ .+.+.+.++|++++++|+.++++| ||+.......++.++++.....++..+++
T Consensus 2 ~~kli~~DlDGTLl~~~~~i~~~~~~ai~~l~~~G~~~~iaT---GR~~~~~~~~~~~l~~~~~~~~~I~~NGa 72 (270)
T PRK10513 2 AIKLIAIDMDGTLLLPDHTISPAVKQAIAAARAKGVNVVLTT---GRPYAGVHRYLKELHMEQPGDYCITNNGA 72 (270)
T ss_pred ceEEEEEecCCcCcCCCCccCHHHHHHHHHHHHCCCEEEEec---CCChHHHHHHHHHhCCCCCCCeEEEcCCe
Confidence 37899999999999865 456679999999999999999999 89999888888888875432334555543
No 67
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.56 E-value=8.2e-15 Score=131.19 Aligned_cols=107 Identities=20% Similarity=0.155 Sum_probs=81.2
Q ss_pred HhHHHHHHHHHcCCCcEEEEecCCceeecCCCccccCCCccceeeeeeecCcccccCCCcHHHHHHHHHHcCCCCCcEEE
Q 017785 228 YKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICM 307 (366)
Q Consensus 228 ~~l~~a~~~l~~~~g~~~i~sn~d~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~gKP~p~~~~~a~~~lgv~~~~vl~ 307 (366)
+.+++.+..++...-...+.||.|.-.+ . ......+..+|+..........-||+|.+|+++++++|++|++|++
T Consensus 116 ~~~~~~lq~lR~~g~~l~iisN~d~r~~--~---~l~~~~l~~~fD~vv~S~e~g~~KPDp~If~~al~~l~v~Pee~vh 190 (237)
T KOG3085|consen 116 DGMQELLQKLRKKGTILGIISNFDDRLR--L---LLLPLGLSAYFDFVVESCEVGLEKPDPRIFQLALERLGVKPEECVH 190 (237)
T ss_pred cHHHHHHHHHHhCCeEEEEecCCcHHHH--H---HhhccCHHHhhhhhhhhhhhccCCCChHHHHHHHHHhCCChHHeEE
Confidence 4566788888875446788899887543 1 2222233355555555555566999999999999999999999999
Q ss_pred EcCCchhhHHHHHHcCCcEEEEecCCCCcccc
Q 017785 308 VGDRLDTDILFGQNGGCKTLLVLSGVTSLSML 339 (366)
Q Consensus 308 VGDs~~~Di~~a~~aG~~tv~V~~G~~~~~~l 339 (366)
|||++.||+++|+++||++++|-........+
T Consensus 191 IgD~l~nD~~gA~~~G~~ailv~~~~~~~~~~ 222 (237)
T KOG3085|consen 191 IGDLLENDYEGARNLGWHAILVDNSITALKEL 222 (237)
T ss_pred ecCccccccHhHHHcCCEEEEEccccchhhhh
Confidence 99999999999999999999998766544443
No 68
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=99.56 E-value=1.3e-14 Score=120.99 Aligned_cols=49 Identities=31% Similarity=0.419 Sum_probs=47.2
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEecC
Q 017785 284 GKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSG 332 (366)
Q Consensus 284 gKP~p~~~~~a~~~lgv~~~~vl~VGDs~~~Di~~a~~aG~~tv~V~~G 332 (366)
+||.+..|..|++.+++++++|+||||.+.+||.+|+.+||+||+|-.-
T Consensus 92 ~KP~~~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~~tIlV~Pl 140 (175)
T COG2179 92 KKPFGRAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGMRTILVEPL 140 (175)
T ss_pred cCccHHHHHHHHHHcCCChhHEEEEcchhhhhhhcccccCcEEEEEEEe
Confidence 8999999999999999999999999999999999999999999998653
No 69
>PLN02954 phosphoserine phosphatase
Probab=99.51 E-value=2.1e-13 Score=123.21 Aligned_cols=72 Identities=18% Similarity=0.356 Sum_probs=56.5
Q ss_pred cCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEecCCCCcccccCCCCCCCCCEEECChhHHHHHH
Q 017785 283 VGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLK 362 (366)
Q Consensus 283 ~gKP~p~~~~~a~~~lgv~~~~vl~VGDs~~~Di~~a~~aG~~tv~V~~G~~~~~~l~~~~~~~~pd~v~~sl~~l~~~~ 362 (366)
.++|+|..++.+++++|. ++|++|||+. +|+++++++|+..+....+....+... ..|+++++++.++.+++
T Consensus 152 ~~~~K~~~i~~~~~~~~~--~~~i~iGDs~-~Di~aa~~~~~~~~~~~~~~~~~~~~~-----~~~~~~i~~~~el~~~~ 223 (224)
T PLN02954 152 RSGGKAEAVQHIKKKHGY--KTMVMIGDGA-TDLEARKPGGADLFIGYGGVQVREAVA-----AKADWFVTDFQDLIEVL 223 (224)
T ss_pred CCccHHHHHHHHHHHcCC--CceEEEeCCH-HHHHhhhcCCCCEEEecCCCccCHHHH-----hcCCEEECCHHHHHHhh
Confidence 367788999999999885 6999999998 999999999988765544333333332 46999999999998764
No 70
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=99.50 E-value=5.2e-13 Score=120.58 Aligned_cols=54 Identities=20% Similarity=0.230 Sum_probs=46.9
Q ss_pred EEEecceeEEeCCE-eCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCC
Q 017785 86 FIFDCDGVIWKGDK-LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT 142 (366)
Q Consensus 86 viFDiDGTL~d~~~-~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~ 142 (366)
|+||+||||+|+.. +.+.+.++|++++++|++++++| ||+...+.+.++.+|++
T Consensus 1 i~~DlDGTLl~~~~~i~~~~~~al~~l~~~Gi~~~~aT---GR~~~~~~~~~~~l~~~ 55 (225)
T TIGR01482 1 IASDIDGTLTDPNRAINESALEAIRKAESVGIPVVLVT---GNSVQFARALAKLIGTP 55 (225)
T ss_pred CeEeccCccCCCCcccCHHHHHHHHHHHHCCCEEEEEc---CCchHHHHHHHHHhCCC
Confidence 58999999999765 55668899999999999999999 78998888888888853
No 71
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=99.50 E-value=1.4e-13 Score=121.92 Aligned_cols=86 Identities=19% Similarity=0.201 Sum_probs=61.1
Q ss_pred HHHHHHHHcCCCcEEEEecCCceeecCCCccccCCCccceeeeeeecCcccccCCCcHHHHHHHHHHcCCCCCcEEEEcC
Q 017785 231 QYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGD 310 (366)
Q Consensus 231 ~~a~~~l~~~~g~~~i~sn~d~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~gKP~p~~~~~a~~~lgv~~~~vl~VGD 310 (366)
.+.+..+++.+....|+||..... ... ......+..++....+.+.... ||+|+.|..+++++|+++++|++|||
T Consensus 112 ~~~L~~l~~~g~~~~i~T~~~~~~-~~~---~l~~~gl~~~f~~~~~~~~~~~-KP~p~~~~~~~~~~~~~~~~~i~vGD 186 (197)
T TIGR01548 112 KGLLRELHRAPKGMAVVTGRPRKD-AAK---FLTTHGLEILFPVQIWMEDCPP-KPNPEPLILAAKALGVEACHAAMVGD 186 (197)
T ss_pred HHHHHHHHHcCCcEEEECCCCHHH-HHH---HHHHcCchhhCCEEEeecCCCC-CcCHHHHHHHHHHhCcCcccEEEEeC
Confidence 555666665444578888886532 111 1122223345555555665555 99999999999999999999999999
Q ss_pred CchhhHHHHHHc
Q 017785 311 RLDTDILFGQNG 322 (366)
Q Consensus 311 s~~~Di~~a~~a 322 (366)
++ +|+++|+++
T Consensus 187 ~~-~Di~aA~~a 197 (197)
T TIGR01548 187 TV-DDIITGRKA 197 (197)
T ss_pred CH-HHHHHHHhC
Confidence 98 999999875
No 72
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=99.49 E-value=2.4e-14 Score=123.08 Aligned_cols=98 Identities=22% Similarity=0.233 Sum_probs=72.0
Q ss_pred HHhHHHHHHHHHcCCCcEEEEecCCceeecCCCccccCCCccceeeeeeecCcccccCCCcHHHHHHHHHHcCCCCCcEE
Q 017785 227 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQIC 306 (366)
Q Consensus 227 y~~l~~a~~~l~~~~g~~~i~sn~d~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~gKP~p~~~~~a~~~lgv~~~~vl 306 (366)
++.+.+.+..+++.....+++||.+... ........+ +...+....+.+.....||+|.+|..+++++|++|++|+
T Consensus 79 ~~~~~~~L~~l~~~~~~~~i~Sn~~~~~-~~~~l~~~~---~~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~p~~~~ 154 (176)
T PF13419_consen 79 YPGVRELLERLKAKGIPLVIVSNGSRER-IERVLERLG---LDDYFDEIISSDDVGSRKPDPDAYRRALEKLGIPPEEIL 154 (176)
T ss_dssp STTHHHHHHHHHHTTSEEEEEESSEHHH-HHHHHHHTT---HGGGCSEEEEGGGSSSSTTSHHHHHHHHHHHTSSGGGEE
T ss_pred hhhhhhhhhhcccccceeEEeecCCccc-ccccccccc---cccccccccccchhhhhhhHHHHHHHHHHHcCCCcceEE
Confidence 4456777777776555567778876532 111111122 224455555566667799999999999999999999999
Q ss_pred EEcCCchhhHHHHHHcCCcEEEE
Q 017785 307 MVGDRLDTDILFGQNGGCKTLLV 329 (366)
Q Consensus 307 ~VGDs~~~Di~~a~~aG~~tv~V 329 (366)
+|||++ .|+++|+++||++|+|
T Consensus 155 ~vgD~~-~d~~~A~~~G~~~i~v 176 (176)
T PF13419_consen 155 FVGDSP-SDVEAAKEAGIKTIWV 176 (176)
T ss_dssp EEESSH-HHHHHHHHTTSEEEEE
T ss_pred EEeCCH-HHHHHHHHcCCeEEeC
Confidence 999998 9999999999999987
No 73
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=99.49 E-value=2.4e-14 Score=132.71 Aligned_cols=67 Identities=27% Similarity=0.379 Sum_probs=55.9
Q ss_pred cCcEEEEecceeEEeCCE-eCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCCCCcCceeccHHH
Q 017785 82 SVETFIFDCDGVIWKGDK-LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFA 154 (366)
Q Consensus 82 ~ik~viFDiDGTL~d~~~-~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~~~~~~i~~~~~~ 154 (366)
.+|+|+|||||||++++. +.+.+.++|++++++|++++++| ||+.......++.++++. -++..+++
T Consensus 2 ~~kli~~DlDGTLl~~~~~i~~~~~~al~~~~~~g~~v~iaT---GR~~~~~~~~~~~l~~~~---~~I~~NGa 69 (264)
T COG0561 2 MIKLLAFDLDGTLLDSNKTISPETKEALARLREKGVKVVLAT---GRPLPDVLSILEELGLDG---PLITFNGA 69 (264)
T ss_pred CeeEEEEcCCCCccCCCCccCHHHHHHHHHHHHCCCEEEEEC---CCChHHHHHHHHHcCCCc---cEEEeCCe
Confidence 478999999999998655 66668999999999999999999 889988888889999864 34444443
No 74
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=99.48 E-value=3.5e-13 Score=118.09 Aligned_cols=70 Identities=20% Similarity=0.271 Sum_probs=54.8
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEecCCCCcccccCCCCCCCCCEEEC------ChhH
Q 017785 284 GKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTN------KISD 357 (366)
Q Consensus 284 gKP~p~~~~~a~~~lgv~~~~vl~VGDs~~~Di~~a~~aG~~tv~V~~G~~~~~~l~~~~~~~~pd~v~~------sl~~ 357 (366)
+++++..+..+++++|+++++|++|||+. +|+.+++++|+..+ |.+ ..+... ..|+|+++ .+.+
T Consensus 94 ~~~k~~~l~~~~~~~gl~~~ev~~VGDs~-~D~~~a~~aG~~~~-v~~---~~~~~~-----~~a~~v~~~~~g~g~~~e 163 (183)
T PRK09484 94 QSNKLIAFSDLLEKLAIAPEQVAYIGDDL-IDWPVMEKVGLSVA-VAD---AHPLLL-----PRADYVTRIAGGRGAVRE 163 (183)
T ss_pred CCcHHHHHHHHHHHhCCCHHHEEEECCCH-HHHHHHHHCCCeEe-cCC---hhHHHH-----HhCCEEecCCCCCCHHHH
Confidence 35567889999999999999999999997 99999999999843 432 222222 36899997 6788
Q ss_pred HHHHHH
Q 017785 358 FLSLKA 363 (366)
Q Consensus 358 l~~~~~ 363 (366)
+.+++.
T Consensus 164 l~~~i~ 169 (183)
T PRK09484 164 VCDLLL 169 (183)
T ss_pred HHHHHH
Confidence 877653
No 75
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=99.47 E-value=1.5e-12 Score=117.03 Aligned_cols=57 Identities=16% Similarity=0.217 Sum_probs=49.4
Q ss_pred CcEEEEecceeEEeCCE-eCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCC
Q 017785 83 VETFIFDCDGVIWKGDK-LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT 142 (366)
Q Consensus 83 ik~viFDiDGTL~d~~~-~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~ 142 (366)
+|+|+||+||||++.+. +.+.+.++|++++++|++++++| ||+...+.+.++.++++
T Consensus 1 ik~v~~DlDGTLl~~~~~i~~~~~~~i~~l~~~g~~~~~~T---GR~~~~~~~~~~~l~~~ 58 (215)
T TIGR01487 1 IKLVAIDIDGTLTEPNRMISERAIEAIRKAEKKGIPVSLVT---GNTVPFARALAVLIGTS 58 (215)
T ss_pred CcEEEEecCCCcCCCCcccCHHHHHHHHHHHHCCCEEEEEc---CCcchhHHHHHHHhCCC
Confidence 57999999999998654 66779999999999999999999 78888887777888775
No 76
>PRK10976 putative hydrolase; Provisional
Probab=99.47 E-value=6e-12 Score=116.76 Aligned_cols=57 Identities=26% Similarity=0.398 Sum_probs=50.7
Q ss_pred CcEEEEecceeEEeCCE-eCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCC
Q 017785 83 VETFIFDCDGVIWKGDK-LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT 142 (366)
Q Consensus 83 ik~viFDiDGTL~d~~~-~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~ 142 (366)
+|+|+||+||||+++++ +.+.+.++|++++++|++++++| ||+...+...++.+|++
T Consensus 2 ikli~~DlDGTLl~~~~~is~~~~~ai~~l~~~G~~~~iaT---GR~~~~~~~~~~~l~~~ 59 (266)
T PRK10976 2 YQVVASDLDGTLLSPDHTLSPYAKETLKLLTARGIHFVFAT---GRHHVDVGQIRDNLEIK 59 (266)
T ss_pred ceEEEEeCCCCCcCCCCcCCHHHHHHHHHHHHCCCEEEEEc---CCChHHHHHHHHhcCCC
Confidence 68999999999998654 66668999999999999999999 89999888888888875
No 77
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=99.47 E-value=5.8e-13 Score=109.33 Aligned_cols=50 Identities=28% Similarity=0.456 Sum_probs=45.5
Q ss_pred cccccCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEE
Q 017785 279 EPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLV 329 (366)
Q Consensus 279 e~~~~gKP~p~~~~~a~~~lgv~~~~vl~VGDs~~~Di~~a~~aG~~tv~V 329 (366)
.....+||++..+..+++.++.+++++++|||+. +|+++++++|+++++|
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~igD~~-~d~~~~~~~g~~~i~v 139 (139)
T cd01427 90 GPFDIGKPNPDKLLAALKLLGVDPEEVLMVGDSL-NDIEMAKAAGGLGVAV 139 (139)
T ss_pred cccccCCCCHHHHHHHHHHcCCChhhEEEeCCCH-HHHHHHHHcCCceeeC
Confidence 3344599999999999999999999999999998 9999999999999975
No 78
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.46 E-value=2.2e-12 Score=120.16 Aligned_cols=69 Identities=19% Similarity=0.169 Sum_probs=56.6
Q ss_pred ccCcEEEEecceeEEeCCEeC-CCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCCCCcCceeccHHH
Q 017785 81 DSVETFIFDCDGVIWKGDKLI-DGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFA 154 (366)
Q Consensus 81 ~~ik~viFDiDGTL~d~~~~~-~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~~~~~~i~~~~~~ 154 (366)
..+++|++||||||+++++.+ +.+.++|++++++|++++++| ||+...+...++++|++. .-++..+++
T Consensus 5 ~~~~lI~~DlDGTLL~~~~~i~~~~~~ai~~l~~~Gi~~viaT---GR~~~~i~~~~~~l~~~~--~~~I~~NGa 74 (271)
T PRK03669 5 QDPLLIFTDLDGTLLDSHTYDWQPAAPWLTRLREAQVPVILCS---SKTAAEMLPLQQTLGLQG--LPLIAENGA 74 (271)
T ss_pred CCCeEEEEeCccCCcCCCCcCcHHHHHHHHHHHHcCCeEEEEc---CCCHHHHHHHHHHhCCCC--CcEEEeCCC
Confidence 468899999999999976655 568899999999999999999 899999988889998842 124555544
No 79
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=99.46 E-value=1.9e-13 Score=127.22 Aligned_cols=57 Identities=26% Similarity=0.327 Sum_probs=50.9
Q ss_pred CcEEEEecceeEEeCCE-eCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCC
Q 017785 83 VETFIFDCDGVIWKGDK-LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT 142 (366)
Q Consensus 83 ik~viFDiDGTL~d~~~-~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~ 142 (366)
+|+|+||+||||++.++ +.+.+.++|++++++|+.++++| ||+...+.+.+++++++
T Consensus 2 ~kli~~DlDGTLl~~~~~i~~~~~~ai~~l~~~G~~~~iaT---GR~~~~~~~~~~~l~~~ 59 (272)
T PRK15126 2 ARLAAFDMDGTLLMPDHHLGEKTLSTLARLRERDITLTFAT---GRHVLEMQHILGALSLD 59 (272)
T ss_pred ccEEEEeCCCcCcCCCCcCCHHHHHHHHHHHHCCCEEEEEC---CCCHHHHHHHHHHcCCC
Confidence 78999999999998654 66668999999999999999999 89999988888998875
No 80
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=99.45 E-value=8.3e-14 Score=118.31 Aligned_cols=49 Identities=24% Similarity=0.316 Sum_probs=42.1
Q ss_pred eeeeecCcccccCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcC
Q 017785 272 FVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGG 323 (366)
Q Consensus 272 ~~~~~~~e~~~~gKP~p~~~~~a~~~lgv~~~~vl~VGDs~~~Di~~a~~aG 323 (366)
+....+.+... +||+|++|.++++++|+++ +|++|||+. .|+++|+++|
T Consensus 106 f~~i~~~~~~~-~Kp~~~~~~~~~~~~~~~~-~~l~iGDs~-~Di~aa~~aG 154 (154)
T TIGR01549 106 FDLILGSDEFG-AKPEPEIFLAALESLGLPP-EVLHVGDNL-NDIEGARNAG 154 (154)
T ss_pred CcEEEecCCCC-CCcCHHHHHHHHHHcCCCC-CEEEEeCCH-HHHHHHHHcc
Confidence 33444455555 8999999999999999999 999999997 9999999998
No 81
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=99.44 E-value=1.2e-12 Score=111.54 Aligned_cols=62 Identities=16% Similarity=0.252 Sum_probs=51.5
Q ss_pred CCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEecCCCCcccccCCCCCCCCCEEECChh
Q 017785 285 KPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKIS 356 (366)
Q Consensus 285 KP~p~~~~~a~~~lgv~~~~vl~VGDs~~~Di~~a~~aG~~tv~V~~G~~~~~~l~~~~~~~~pd~v~~sl~ 356 (366)
||+|+.+..+++++|+++++|++|||+. +|++|++++|+. +.|.... +.+. ..|++++++-.
T Consensus 75 ~~k~~~~~~~~~~~~~~~~~~~~vGDs~-~D~~~~~~ag~~-~~v~~~~---~~~~-----~~a~~i~~~~~ 136 (154)
T TIGR01670 75 SNKLIAFSDILEKLALAPENVAYIGDDL-IDWPVMEKVGLS-VAVADAH---PLLI-----PRADYVTRIAG 136 (154)
T ss_pred cchHHHHHHHHHHcCCCHHHEEEECCCH-HHHHHHHHCCCe-EecCCcC---HHHH-----HhCCEEecCCC
Confidence 6789999999999999999999999998 999999999986 7666553 2333 35899998654
No 82
>PLN02887 hydrolase family protein
Probab=99.44 E-value=2.8e-12 Score=130.01 Aligned_cols=65 Identities=17% Similarity=0.224 Sum_probs=55.3
Q ss_pred cHHHHhccCcEEEEecceeEEeCCE-eCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCC
Q 017785 75 NADELIDSVETFIFDCDGVIWKGDK-LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT 142 (366)
Q Consensus 75 ~~~~~~~~ik~viFDiDGTL~d~~~-~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~ 142 (366)
+.+....++|+|+|||||||+++++ +.+.+.++|++++++|+.++++| ||+...+...++.++++
T Consensus 300 ~~~~~~~~iKLIa~DLDGTLLn~d~~Is~~t~eAI~kl~ekGi~~vIAT---GR~~~~i~~~l~~L~l~ 365 (580)
T PLN02887 300 SLRFYKPKFSYIFCDMDGTLLNSKSQISETNAKALKEALSRGVKVVIAT---GKARPAVIDILKMVDLA 365 (580)
T ss_pred chhhhccCccEEEEeCCCCCCCCCCccCHHHHHHHHHHHHCCCeEEEEc---CCCHHHHHHHHHHhCcc
Confidence 3344456899999999999998754 66678999999999999999999 89999988888888874
No 83
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=99.44 E-value=1.8e-12 Score=111.67 Aligned_cols=60 Identities=20% Similarity=0.319 Sum_probs=48.9
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEecCCCCcccccCCCCCCCCCEEEC
Q 017785 284 GKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTN 353 (366)
Q Consensus 284 gKP~p~~~~~a~~~lgv~~~~vl~VGDs~~~Di~~a~~aG~~tv~V~~G~~~~~~l~~~~~~~~pd~v~~ 353 (366)
.||+|+.|+.+++++|+++++|++|||+. +|++|++.+|+..+. .... +.+.+ .+++++.
T Consensus 80 ~kpkp~~~~~~~~~l~~~~~ev~~iGD~~-nDi~~~~~ag~~~am---~nA~-~~lk~-----~A~~I~~ 139 (169)
T TIGR02726 80 IKKKTEPYAQMLEEMNISDAEVCYVGDDL-VDLSMMKRVGLAVAV---GDAV-ADVKE-----AAAYVTT 139 (169)
T ss_pred CCCCHHHHHHHHHHcCcCHHHEEEECCCH-HHHHHHHHCCCeEEC---cCch-HHHHH-----hCCEEcC
Confidence 37999999999999999999999999998 999999999977664 3333 33332 5788876
No 84
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=99.43 E-value=5.7e-13 Score=122.95 Aligned_cols=55 Identities=29% Similarity=0.483 Sum_probs=48.0
Q ss_pred EEEEecceeEEeCCE-eCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCC
Q 017785 85 TFIFDCDGVIWKGDK-LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT 142 (366)
Q Consensus 85 ~viFDiDGTL~d~~~-~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~ 142 (366)
+|+||+||||++... +.+.+.++|++++++|+.++++| ||+...+...+++++++
T Consensus 1 li~~DlDGTLl~~~~~i~~~~~~~i~~l~~~G~~~~iaT---GR~~~~~~~~~~~~~~~ 56 (256)
T TIGR00099 1 LIFIDLDGTLLNDDHTISPSTKEALAKLREKGIKVVLAT---GRPYKEVKNILKELGLD 56 (256)
T ss_pred CEEEeCCCCCCCCCCccCHHHHHHHHHHHHCCCeEEEEe---CCCHHHHHHHHHHcCCC
Confidence 479999999998654 56678999999999999999999 78888888888888875
No 85
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=99.42 E-value=1.3e-12 Score=117.60 Aligned_cols=69 Identities=23% Similarity=0.251 Sum_probs=55.1
Q ss_pred cCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEecCCCCcccccCCCCCCCCCEEEC--ChhHHHH
Q 017785 283 VGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTN--KISDFLS 360 (366)
Q Consensus 283 ~gKP~p~~~~~a~~~lgv~~~~vl~VGDs~~~Di~~a~~aG~~tv~V~~G~~~~~~l~~~~~~~~pd~v~~--sl~~l~~ 360 (366)
.++|+|.+|+.+++++++++++|++|||+. +|+++|+++|+..++ ...+.+. ..+++++. ++.+++.
T Consensus 149 ~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~-~Di~aa~~ag~~i~~-----~~~~~~~-----~~a~~~i~~~~~~~~~~ 217 (219)
T TIGR00338 149 DASYKGKTLLILLRKEGISPENTVAVGDGA-NDLSMIKAAGLGIAF-----NAKPKLQ-----QKADICINKKDLTDILP 217 (219)
T ss_pred CCcccHHHHHHHHHHcCCCHHHEEEEECCH-HHHHHHHhCCCeEEe-----CCCHHHH-----HhchhccCCCCHHHHHh
Confidence 357899999999999999999999999997 999999999997543 1233333 25899977 6788776
Q ss_pred HH
Q 017785 361 LK 362 (366)
Q Consensus 361 ~~ 362 (366)
++
T Consensus 218 ~~ 219 (219)
T TIGR00338 218 LL 219 (219)
T ss_pred hC
Confidence 53
No 86
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=99.42 E-value=1.2e-12 Score=113.21 Aligned_cols=51 Identities=16% Similarity=0.160 Sum_probs=45.9
Q ss_pred CCCcHHHHHHHHHHc--CCCCCcEEEEcCCchhhHHHHHHcCCcEEEEecCCCC
Q 017785 284 GKPSTFMMDYLANKF--GIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTS 335 (366)
Q Consensus 284 gKP~p~~~~~a~~~l--gv~~~~vl~VGDs~~~Di~~a~~aG~~tv~V~~G~~~ 335 (366)
.||.+.++..+.+.+ |++|++|++|||++ .|+++|+++|+.+++|.+|...
T Consensus 110 ~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~-~di~aA~~aGi~~i~v~~g~~~ 162 (174)
T TIGR01685 110 AKQLEMILQKVNKVDPSVLKPAQILFFDDRT-DNVREVWGYGVTSCYCPSGMDK 162 (174)
T ss_pred HHHHHHHHHHhhhcccCCCCHHHeEEEcChh-HhHHHHHHhCCEEEEcCCCccH
Confidence 677888888888888 89999999999998 9999999999999999998643
No 87
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=99.41 E-value=3.8e-12 Score=121.66 Aligned_cols=49 Identities=24% Similarity=0.307 Sum_probs=46.1
Q ss_pred cCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEecC
Q 017785 283 VGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSG 332 (366)
Q Consensus 283 ~gKP~p~~~~~a~~~lgv~~~~vl~VGDs~~~Di~~a~~aG~~tv~V~~G 332 (366)
.+||+|.++.++++++++++++++||||+. +|+++|+++||++|+|...
T Consensus 102 ~rKP~p~~l~~a~~~l~v~~~~svmIGDs~-sDi~aAk~aGi~~I~v~~~ 150 (354)
T PRK05446 102 CRKPKTGLVEEYLAEGAIDLANSYVIGDRE-TDVQLAENMGIKGIRYARE 150 (354)
T ss_pred CCCCCHHHHHHHHHHcCCCcccEEEEcCCH-HHHHHHHHCCCeEEEEECC
Confidence 389999999999999999999999999997 9999999999999999553
No 88
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=99.39 E-value=2.2e-12 Score=115.99 Aligned_cols=104 Identities=13% Similarity=0.061 Sum_probs=71.2
Q ss_pred CHHhHHHHHHHHHcCCCcEEEEecCCceeecCCCccccCCCccceeeeeeecCcccccCCCcHHHHHHHHHHcCCCCCcE
Q 017785 226 NYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQI 305 (366)
Q Consensus 226 ~y~~l~~a~~~l~~~~g~~~i~sn~d~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~gKP~p~~~~~a~~~lgv~~~~v 305 (366)
.|+++.+.+..+++.....+|+||........ .....+.+.+..++..... .....||+|+.|..+++++|++|++|
T Consensus 96 lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~-~~~~~~~~~L~~~f~~~fd--~~~g~KP~p~~y~~i~~~lgv~p~e~ 172 (220)
T TIGR01691 96 LYPDVPPALEAWLQLGLRLAVYSSGSVPAQKL-LFGHSDAGNLTPYFSGYFD--TTVGLKTEAQSYVKIAGQLGSPPREI 172 (220)
T ss_pred cCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHH-HHhhccccchhhhcceEEE--eCcccCCCHHHHHHHHHHhCcChhHE
Confidence 36778888888887555578888886421000 0000000111122221111 11237999999999999999999999
Q ss_pred EEEcCCchhhHHHHHHcCCcEEEEecCC
Q 017785 306 CMVGDRLDTDILFGQNGGCKTLLVLSGV 333 (366)
Q Consensus 306 l~VGDs~~~Di~~a~~aG~~tv~V~~G~ 333 (366)
++|||+. .|+++|+++||++|++.++.
T Consensus 173 lfVgDs~-~Di~AA~~AG~~ti~v~r~g 199 (220)
T TIGR01691 173 LFLSDII-NELDAARKAGLHTGQLVRPG 199 (220)
T ss_pred EEEeCCH-HHHHHHHHcCCEEEEEECCC
Confidence 9999997 99999999999999997654
No 89
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.38 E-value=1.3e-12 Score=123.98 Aligned_cols=71 Identities=15% Similarity=0.199 Sum_probs=57.9
Q ss_pred ccCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEecCCCCcccccCCCCCCCCCEEEC--ChhHHH
Q 017785 282 VVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTN--KISDFL 359 (366)
Q Consensus 282 ~~gKP~p~~~~~a~~~lgv~~~~vl~VGDs~~~Di~~a~~aG~~tv~V~~G~~~~~~l~~~~~~~~pd~v~~--sl~~l~ 359 (366)
..+||+++.+..+++++|+++++|++|||+. ||+.|+++||+..++ +..+.+++ .++++++ +++.++
T Consensus 244 v~~k~K~~~L~~la~~lgi~~~qtIaVGDg~-NDl~m~~~AGlgiA~-----nAkp~Vk~-----~Ad~~i~~~~l~~~l 312 (322)
T PRK11133 244 VDAQYKADTLTRLAQEYEIPLAQTVAIGDGA-NDLPMIKAAGLGIAY-----HAKPKVNE-----QAQVTIRHADLMGVL 312 (322)
T ss_pred CCcccHHHHHHHHHHHcCCChhhEEEEECCH-HHHHHHHHCCCeEEe-----CCCHHHHh-----hCCEEecCcCHHHHH
Confidence 3479999999999999999999999999998 999999999987664 23344443 6899987 677777
Q ss_pred HHHH
Q 017785 360 SLKA 363 (366)
Q Consensus 360 ~~~~ 363 (366)
-++.
T Consensus 313 ~~~~ 316 (322)
T PRK11133 313 CILS 316 (322)
T ss_pred HHhc
Confidence 6654
No 90
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=99.37 E-value=4.4e-12 Score=119.75 Aligned_cols=49 Identities=14% Similarity=0.059 Sum_probs=46.4
Q ss_pred CCCcHHHHHHHHHHcCC-CCCcEEEEcCCchhhHHHHHHcCCcEEEEecCC
Q 017785 284 GKPSTFMMDYLANKFGI-QKSQICMVGDRLDTDILFGQNGGCKTLLVLSGV 333 (366)
Q Consensus 284 gKP~p~~~~~a~~~lgv-~~~~vl~VGDs~~~Di~~a~~aG~~tv~V~~G~ 333 (366)
+||+|.+++.++++++. ++++|+||||+. +|+++|+++|+.+++|.+|.
T Consensus 250 ~kp~p~~~~~~l~~~~~~~~~~~~~vgD~~-~d~~~a~~~Gi~~i~v~~g~ 299 (300)
T PHA02530 250 KRPDDVVKEEIFWEKIAPKYDVLLAVDDRD-QVVDMWRRIGLECWQVAPGD 299 (300)
T ss_pred CCCcHHHHHHHHHHHhccCceEEEEEcCcH-HHHHHHHHhCCeEEEecCCC
Confidence 79999999999999998 679999999997 99999999999999998874
No 91
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=99.35 E-value=1.6e-13 Score=119.03 Aligned_cols=53 Identities=13% Similarity=0.170 Sum_probs=45.5
Q ss_pred ceeeeeeecCcccccCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHc
Q 017785 269 VGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNG 322 (366)
Q Consensus 269 ~~~~~~~~~~e~~~~gKP~p~~~~~a~~~lgv~~~~vl~VGDs~~~Di~~a~~a 322 (366)
..++....+.+....+||+|++|+.+++++|++|++|+||||+. .||++|+++
T Consensus 123 ~~~fd~v~~~~~~~~~KP~p~~f~~~~~~~~~~p~~~l~vgD~~-~Di~~A~~~ 175 (175)
T TIGR01493 123 PWYFDRAFSVDTVRAYKPDPVVYELVFDTVGLPPDRVLMVAAHQ-WDLIGARKF 175 (175)
T ss_pred HHHHhhhccHhhcCCCCCCHHHHHHHHHHHCCCHHHeEeEecCh-hhHHHHhcC
Confidence 44455556666667799999999999999999999999999997 999999874
No 92
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=99.33 E-value=8.5e-12 Score=113.16 Aligned_cols=56 Identities=14% Similarity=0.032 Sum_probs=43.4
Q ss_pred eeeecCcccccCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEecCCCCc
Q 017785 273 VGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSL 336 (366)
Q Consensus 273 ~~~~~~e~~~~gKP~p~~~~~a~~~lgv~~~~vl~VGDs~~~Di~~a~~aG~~tv~V~~G~~~~ 336 (366)
....+.+.....||++. .+++++|+ +++|||+. +||.+|+++|++++.|++|.+..
T Consensus 162 ~~i~~~d~~~~~Kp~~~---~~l~~~~i----~i~vGDs~-~DI~aAk~AGi~~I~V~~g~~s~ 217 (237)
T TIGR01672 162 PVIFAGDKPGQYQYTKT---QWIQDKNI----RIHYGDSD-NDITAAKEAGARGIRILRASNST 217 (237)
T ss_pred eEEECCCCCCCCCCCHH---HHHHhCCC----eEEEeCCH-HHHHHHHHCCCCEEEEEecCCCC
Confidence 33455555445788775 35566766 79999997 99999999999999999988754
No 93
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=99.30 E-value=2.2e-11 Score=109.76 Aligned_cols=67 Identities=22% Similarity=0.210 Sum_probs=53.8
Q ss_pred EEEEecceeEEeCCE-eCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCCCCcCceeccHHHHH
Q 017785 85 TFIFDCDGVIWKGDK-LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAA 156 (366)
Q Consensus 85 ~viFDiDGTL~d~~~-~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~~~~~~i~~~~~~~~ 156 (366)
.|++||||||+++++ ..+.+.++|++++++|++++++| ||+...+...++.+|++. .-++..+++..
T Consensus 1 ~i~~DlDGTLL~~~~~~~~~~~~~l~~l~~~gi~~~i~T---gR~~~~~~~~~~~l~~~~--~~~I~~NGa~i 68 (221)
T TIGR02463 1 WVFSDLDGTLLDSHSYDWQPAAPWLTRLQEAGIPVILCT---SKTAAEVEYLQKALGLTG--DPYIAENGAAI 68 (221)
T ss_pred CEEEeCCCCCcCCCCCCcHHHHHHHHHHHHCCCeEEEEc---CCCHHHHHHHHHHcCCCC--CcEEEeCCcEE
Confidence 379999999999765 55668999999999999999999 688988888889998752 23565555443
No 94
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=99.30 E-value=6.5e-11 Score=107.92 Aligned_cols=65 Identities=17% Similarity=0.179 Sum_probs=51.5
Q ss_pred EEEEecceeEEeCCEeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCCCCcCceeccHHH
Q 017785 85 TFIFDCDGVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFA 154 (366)
Q Consensus 85 ~viFDiDGTL~d~~~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~~~~~~i~~~~~~ 154 (366)
+|++|+||||++.+..+....++++ ++++|+.++++| ||+..++.+.+..+++. .++-++..+++
T Consensus 1 li~~DlDgTLl~~~~~~~~~~~~~~-~~~~gi~~viaT---GR~~~~v~~~~~~l~l~-~~~~~I~~nGa 65 (236)
T TIGR02471 1 LIITDLDNTLLGDDEGLASFVELLR-GSGDAVGFGIAT---GRSVESAKSRYAKLNLP-SPDVLIARVGT 65 (236)
T ss_pred CeEEeccccccCCHHHHHHHHHHHH-hcCCCceEEEEe---CCCHHHHHHHHHhCCCC-CCCEEEECCCc
Confidence 4789999999997666666556666 689999999999 89999999999999886 33445555554
No 95
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=99.30 E-value=7.8e-11 Score=109.35 Aligned_cols=69 Identities=19% Similarity=0.122 Sum_probs=54.7
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHc---CCcEEEEecCCCCcccccCCCCCCCCCEEECChhHHHH
Q 017785 284 GKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNG---GCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLS 360 (366)
Q Consensus 284 gKP~p~~~~~a~~~lgv~~~~vl~VGDs~~~Di~~a~~a---G~~tv~V~~G~~~~~~l~~~~~~~~pd~v~~sl~~l~~ 360 (366)
+--+.....++++++|++.+++++|||+. ||+.|.+.+ |-.+|.| |... ..++|.+++..++..
T Consensus 172 g~~Kg~al~~ll~~~~~~~~~v~~~GD~~-nD~~mf~~~~~~~g~~vav--g~a~----------~~A~~~l~~~~~v~~ 238 (266)
T PRK10187 172 GTNKGEAIAAFMQEAPFAGRTPVFVGDDL-TDEAGFAVVNRLGGISVKV--GTGA----------TQASWRLAGVPDVWS 238 (266)
T ss_pred CCCHHHHHHHHHHhcCCCCCeEEEEcCCc-cHHHHHHHHHhcCCeEEEE--CCCC----------CcCeEeCCCHHHHHH
Confidence 44457889999999999999999999997 999999988 2244544 3322 248999999999999
Q ss_pred HHHhh
Q 017785 361 LKAAA 365 (366)
Q Consensus 361 ~~~~~ 365 (366)
|+...
T Consensus 239 ~L~~l 243 (266)
T PRK10187 239 WLEMI 243 (266)
T ss_pred HHHHH
Confidence 88653
No 96
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=99.29 E-value=3.4e-13 Score=122.85 Aligned_cols=217 Identities=19% Similarity=0.179 Sum_probs=122.7
Q ss_pred EEEecceeEEeCC-EeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCCCCcCceeccHHHHHHHHHhcCC
Q 017785 86 FIFDCDGVIWKGD-KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLKSIDF 164 (366)
Q Consensus 86 viFDiDGTL~d~~-~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~~~~~~i~~~~~~~~~~l~~~~~ 164 (366)
|+||+||||+++. .+.+.+.++|+.++++|+.++++| ||+...+...+..+++. .-++..+++.. +.
T Consensus 1 i~~DlDGTLl~~~~~i~~~~~~al~~l~~~g~~~~i~T---GR~~~~~~~~~~~~~~~---~~~I~~nGa~i-~~----- 68 (254)
T PF08282_consen 1 IFSDLDGTLLNSDGKISPETIEALKELQEKGIKLVIAT---GRSYSSIKRLLKELGID---DYFICSNGALI-DD----- 68 (254)
T ss_dssp EEEECCTTTCSTTSSSCHHHHHHHHHHHHTTCEEEEEC---SSTHHHHHHHHHHTTHC---SEEEEGGGTEE-EE-----
T ss_pred cEEEECCceecCCCeeCHHHHHHHHhhcccceEEEEEc---cCcccccccccccccch---hhhccccccee-ee-----
Confidence 6899999999844 445558899999999999999999 89999998888988886 34555555433 10
Q ss_pred CCCCeEEEec---c---cchHHHHHHcCCeeeCCCCCCCcccccCCC---c------------------ccCCCCCccEE
Q 017785 165 PKDKKVYVVG---E---DGILKELELAGFQYLGGPEDGGKKIELKPG---F------------------LMEHDKDVGAV 217 (366)
Q Consensus 165 ~~~~~~~~~g---~---~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~---~------------------~~~~~~~~~~v 217 (366)
...+.+... . ..+.+.+.+.++.+.....+.. +.... . .......+..+
T Consensus 69 -~~~~~l~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki 144 (254)
T PF08282_consen 69 -PKGKILYEKPIDSDDVKKILKYLKEHNISFFFYTDDDI---YIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKI 144 (254)
T ss_dssp -TTTEEEEEESB-HHHHHHHHHHHHHTTCEEEEEESSEE---EESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEE
T ss_pred -cccccchhhheeccchhheeehhhhcccccccccceee---ecccccccchhhhhhcccccccccccccccccccceee
Confidence 011222111 1 1345556666554322211100 00000 0 00011122222
Q ss_pred EEEccCCCCHHhHHHHHHHHHcCC-Cc-EEEEecCCceeecCCCccccCCCccceeeeeeecCcccccCCCcHHHHHHHH
Q 017785 218 VVGFDRYFNYYKVQYGTLCIRENP-GC-LFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLA 295 (366)
Q Consensus 218 ~~~~~~~~~y~~l~~a~~~l~~~~-g~-~~i~sn~d~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~gKP~p~~~~~a~ 295 (366)
.... ..+.+......+.+.. +. .++.++... .+....+--+.....+++
T Consensus 145 ~~~~----~~~~~~~l~~~l~~~~~~~~~~~~~~~~~-------------------------lei~~~~vsK~~ai~~l~ 195 (254)
T PF08282_consen 145 LFFP----DPEDLEQLREELKKKFPNLIDVVRSSPYF-------------------------LEITPKGVSKGSAIKYLL 195 (254)
T ss_dssp EEES----CHHHHHHHHHHHHHHHTTTEEEEEEETTE-------------------------EEEEETTSSHHHHHHHHH
T ss_pred eccc----cchhhhhhhhhhccccCcceeEEEecccc-------------------------eEEeeCCCCHHHHHHHHh
Confidence 2111 1122222222222110 10 111111111 111222444578899999
Q ss_pred HHcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEecCCCCcccccCCCCCCCCCEEECChhH
Q 017785 296 NKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISD 357 (366)
Q Consensus 296 ~~lgv~~~~vl~VGDs~~~Di~~a~~aG~~tv~V~~G~~~~~~l~~~~~~~~pd~v~~sl~~ 357 (366)
+.+|++++++++|||+. ||++|.+.+|...+. +....+... .+++++.+-.+
T Consensus 196 ~~~~i~~~~~~~~GD~~-ND~~Ml~~~~~~~am---~na~~~~k~------~a~~i~~~~~~ 247 (254)
T PF08282_consen 196 EYLGISPEDIIAFGDSE-NDIEMLELAGYSVAM---GNATPELKK------AADYITPSNND 247 (254)
T ss_dssp HHHTTSGGGEEEEESSG-GGHHHHHHSSEEEEE---TTS-HHHHH------HSSEEESSGTC
T ss_pred hhcccccceeEEeeccc-ccHhHHhhcCeEEEE---cCCCHHHHH------hCCEEecCCCC
Confidence 99999999999999997 999999999955443 655555443 58999888766
No 97
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=99.28 E-value=5.6e-12 Score=114.11 Aligned_cols=55 Identities=27% Similarity=0.347 Sum_probs=50.1
Q ss_pred EEEEecceeEEeCCEeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCC
Q 017785 85 TFIFDCDGVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT 142 (366)
Q Consensus 85 ~viFDiDGTL~d~~~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~ 142 (366)
.|+||+||||+++...++.+.++|++++++|++++++| ||++.++...++++|+.
T Consensus 1 li~~DlDGTLl~~~~~~~~~~~ai~~l~~~G~~~vi~T---gR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 1 VIFTDLDGTLLPPGYEPGPAREALEELKDLGFPIVFVS---SKTRAEQEYYREELGVE 55 (225)
T ss_pred CEEEeCCCCCcCCCCCchHHHHHHHHHHHCCCEEEEEe---CCCHHHHHHHHHHcCCC
Confidence 47999999999977788889999999999999999998 79999998888999974
No 98
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=99.28 E-value=2.6e-11 Score=111.50 Aligned_cols=199 Identities=19% Similarity=0.223 Sum_probs=109.0
Q ss_pred EEEEecceeEEe---C-CEeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCCCCcCceeccHHHHHHHHH
Q 017785 85 TFIFDCDGVIWK---G-DKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLK 160 (366)
Q Consensus 85 ~viFDiDGTL~d---~-~~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~~~~~~i~~~~~~~~~~l~ 160 (366)
+|+.|+||||++ + ..+.|...+.+++++++|+.++++| ||+...+...++.+++.. ++-++..+++...+ .
T Consensus 3 li~tDlDGTLl~~~~~~~~~~~~~~~~i~~~~~~gi~fv~aT---GR~~~~~~~~~~~~~~~~-p~~~I~~NGa~I~~-~ 77 (249)
T TIGR01485 3 LLVSDLDNTLVDHTDGDNQALLRLNALLEDHRGEDSLLVYST---GRSPHSYKELQKQKPLLT-PDIWVTSVGSEIYY-G 77 (249)
T ss_pred EEEEcCCCcCcCCCCCChHHHHHHHHHHHHhhccCceEEEEc---CCCHHHHHHHHhcCCCCC-CCEEEEcCCceEEe-C
Confidence 688999999996 3 3456778899999999999999999 899999988888888653 33455544432211 0
Q ss_pred hcCCCCC------CeEEEecccchHHHHHHcCCeeeCCCCCCCcccccCCCcccCCCCCccEEEEEccCCCCHHhHHHHH
Q 017785 161 SIDFPKD------KKVYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYKVQYGT 234 (366)
Q Consensus 161 ~~~~~~~------~~~~~~g~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~y~~l~~a~ 234 (366)
....+.. ...+. ...+.. +. .++... .+.. ...+.+..+....+.......+....
T Consensus 78 ~~~~~~~~~~~~~~~~~~--~~~~~~-~~-~~~~~l------------~~~~--~~~~~~~k~~~~~~~~~~~~~~~~l~ 139 (249)
T TIGR01485 78 GAEVPDQHWAEYLSEKWQ--RDIVVA-IT-DKFEEL------------KPQP--DLEQRPHKVSFFLDPEAAPEVIKQLT 139 (249)
T ss_pred CCCcCCHHHHHHHhcccC--HHHHHH-HH-hcCccc------------ccCC--ccccCCeeEEEEechhhhhHHHHHHH
Confidence 0000000 00000 001111 11 111110 0000 00111222222222111011122222
Q ss_pred HHHHcCC-CcEEEEecCCceeecCCCccccCCCccceeeeeeecCcccccCCCcHHHHHHHHHHcCCCCCcEEEEcCCch
Q 017785 235 LCIRENP-GCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLD 313 (366)
Q Consensus 235 ~~l~~~~-g~~~i~sn~d~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~gKP~p~~~~~a~~~lgv~~~~vl~VGDs~~ 313 (366)
..+.... .+..+.++... .+.+..++++......+++++|+++++|++|||+.
T Consensus 140 ~~l~~~~~~~~~~~~~~~~-------------------------ldi~~~~~~K~~al~~l~~~~~i~~~~~i~~GD~~- 193 (249)
T TIGR01485 140 EMLKETGLDVKLIYSSGKD-------------------------LDILPQGSGKGQALQYLLQKLAMEPSQTLVCGDSG- 193 (249)
T ss_pred HHHHhcCCCEEEEEECCce-------------------------EEEEeCCCChHHHHHHHHHHcCCCccCEEEEECCh-
Confidence 2222110 11111121110 12233388899999999999999999999999997
Q ss_pred hhHHHHHHcCCcEEEEecC
Q 017785 314 TDILFGQNGGCKTLLVLSG 332 (366)
Q Consensus 314 ~Di~~a~~aG~~tv~V~~G 332 (366)
||++|++.+|..++.|...
T Consensus 194 ND~~ml~~~~~~~va~~na 212 (249)
T TIGR01485 194 NDIELFEIGSVRGVIVSNA 212 (249)
T ss_pred hHHHHHHccCCcEEEECCC
Confidence 9999999988788887554
No 99
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.28 E-value=5.6e-11 Score=110.81 Aligned_cols=58 Identities=21% Similarity=0.220 Sum_probs=51.7
Q ss_pred cCcEEEEecceeEEe-CCEeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCC
Q 017785 82 SVETFIFDCDGVIWK-GDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT 142 (366)
Q Consensus 82 ~ik~viFDiDGTL~d-~~~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~ 142 (366)
++|.|++|+||||++ ...+.+.+.++|++++++|++++++| ||+...+...++.+|+.
T Consensus 3 ~~kli~~DlDGTLl~~~~~~~~~~~~ai~~l~~~Gi~~~iaT---gR~~~~~~~~~~~l~l~ 61 (273)
T PRK00192 3 MKLLVFTDLDGTLLDHHTYSYEPAKPALKALKEKGIPVIPCT---SKTAAEVEVLRKELGLE 61 (273)
T ss_pred cceEEEEcCcccCcCCCCcCcHHHHHHHHHHHHCCCEEEEEc---CCCHHHHHHHHHHcCCC
Confidence 488999999999998 55677889999999999999999999 68888888888999875
No 100
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=99.27 E-value=2.6e-10 Score=105.25 Aligned_cols=64 Identities=19% Similarity=0.193 Sum_probs=54.0
Q ss_pred EEEEecceeEEeCCE-eCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCCCCcCceeccHHH
Q 017785 85 TFIFDCDGVIWKGDK-LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFA 154 (366)
Q Consensus 85 ~viFDiDGTL~d~~~-~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~~~~~~i~~~~~~ 154 (366)
.|+||+||||+++++ .++.+.++|++++++|++++++| ||+...+...++.+|++ +-++..+++
T Consensus 1 li~~DlDGTll~~~~~~~~~~~~~i~~l~~~g~~~~~~T---gR~~~~~~~~~~~~~~~---~~~I~~NGa 65 (256)
T TIGR01486 1 WIFTDLDGTLLDPHGYDWGPAKEVLERLQELGIPVIPCT---SKTAAEVEYLRKELGLE---DPFIVENGG 65 (256)
T ss_pred CEEEcCCCCCcCCCCcCchHHHHHHHHHHHCCCeEEEEc---CCCHHHHHHHHHHcCCC---CcEEEcCCe
Confidence 479999999999877 77779999999999999999999 89999999888999975 235555543
No 101
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=99.25 E-value=2.4e-11 Score=103.81 Aligned_cols=49 Identities=22% Similarity=0.350 Sum_probs=41.8
Q ss_pred ccCcEEEEecceeEE--eCCEeCCCHHHHHHHHHHCCCe--EEEEeCCCCCCH
Q 017785 81 DSVETFIFDCDGVIW--KGDKLIDGVPETLDMLRSKGKR--LVFVTNNSTKSR 129 (366)
Q Consensus 81 ~~ik~viFDiDGTL~--d~~~~~~~~~~ai~~l~~~g~~--~~~~Tn~sg~~~ 129 (366)
..||+++||.|.||. +...+.|+..++++++++.+.. +.+++|++|...
T Consensus 39 ~Gik~li~DkDNTL~~~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~ 91 (168)
T PF09419_consen 39 KGIKALIFDKDNTLTPPYEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSD 91 (168)
T ss_pred cCceEEEEcCCCCCCCCCcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCccc
Confidence 579999999999996 5778888899999999988775 999999875543
No 102
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=99.21 E-value=1.3e-10 Score=104.84 Aligned_cols=75 Identities=12% Similarity=0.028 Sum_probs=54.3
Q ss_pred ccCCCcHHH----------HHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEecCCCCcccccCCCCCCCCCEE
Q 017785 282 VVGKPSTFM----------MDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFY 351 (366)
Q Consensus 282 ~~gKP~p~~----------~~~a~~~lgv~~~~vl~VGDs~~~Di~~a~~aG~~tv~V~~G~~~~~~l~~~~~~~~pd~v 351 (366)
...||+|.. ...++++++.++++|++|||+. +|+.+|++||+..+ +. .- .+. .+....|.+.
T Consensus 130 ~~~kp~p~~~~~~~~~~~~K~~~l~~~~~~~~~~i~iGDs~-~Di~aa~~Ag~~~a--~~-~l-~~~---~~~~~~~~~~ 201 (219)
T PRK09552 130 TITWPHPCDEHCQNHCGCCKPSLIRKLSDTNDFHIVIGDSI-TDLEAAKQADKVFA--RD-FL-ITK---CEELGIPYTP 201 (219)
T ss_pred EEeccCCccccccccCCCchHHHHHHhccCCCCEEEEeCCH-HHHHHHHHCCccee--HH-HH-HHH---HHHcCCCccc
Confidence 347777754 3578899999999999999997 99999999998333 32 11 111 0112358888
Q ss_pred ECChhHHHHHHHh
Q 017785 352 TNKISDFLSLKAA 364 (366)
Q Consensus 352 ~~sl~~l~~~~~~ 364 (366)
++++.|+.+.+..
T Consensus 202 ~~~f~ei~~~l~~ 214 (219)
T PRK09552 202 FETFHDVQTELKH 214 (219)
T ss_pred cCCHHHHHHHHHH
Confidence 9999999887754
No 103
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=99.20 E-value=1.1e-10 Score=103.88 Aligned_cols=69 Identities=12% Similarity=0.096 Sum_probs=48.8
Q ss_pred cHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEecCCCCcccccCCCCCCCCCE-EECChhHHHHHHHhh
Q 017785 287 STFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDF-YTNKISDFLSLKAAA 365 (366)
Q Consensus 287 ~p~~~~~a~~~lgv~~~~vl~VGDs~~~Di~~a~~aG~~tv~V~~G~~~~~~l~~~~~~~~pd~-v~~sl~~l~~~~~~~ 365 (366)
.|.....+++.++..+++|++|||+. +|+++++++|+.. ++ +. ..+... ..|++ +++++.+++.++..+
T Consensus 129 ~p~~k~~~l~~~~~~~~~~v~iGDs~-~D~~~~~aa~~~v-~~--~~-~~~~~~-----~~~~~~~~~~~~el~~~l~~~ 198 (205)
T PRK13582 129 QPDGKRQAVKALKSLGYRVIAAGDSY-NDTTMLGEADAGI-LF--RP-PANVIA-----EFPQFPAVHTYDELLAAIDKA 198 (205)
T ss_pred ccchHHHHHHHHHHhCCeEEEEeCCH-HHHHHHHhCCCCE-EE--CC-CHHHHH-----hCCcccccCCHHHHHHHHHHH
Confidence 33445566677777789999999997 9999999999743 32 22 222222 24665 999999999887654
No 104
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=99.16 E-value=1.2e-10 Score=96.05 Aligned_cols=41 Identities=27% Similarity=0.617 Sum_probs=36.2
Q ss_pred cEEEEecceeEEeCC-------------EeCCCHHHHHHHHHHCCCeEEEEeCC
Q 017785 84 ETFIFDCDGVIWKGD-------------KLIDGVPETLDMLRSKGKRLVFVTNN 124 (366)
Q Consensus 84 k~viFDiDGTL~d~~-------------~~~~~~~~ai~~l~~~g~~~~~~Tn~ 124 (366)
|+++||+|||||++. .+++++.+.|+.|+++|+++.++||+
T Consensus 1 kli~~DlD~Tl~~~~~~~~~~~~~~~~~~~~~gv~e~L~~Lk~~g~~l~i~Sn~ 54 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIVVGEDPIIDLEVTIKEIRDKLQTLKKNGFLLALASYN 54 (128)
T ss_pred CEEEEeCCCCCCCCCcccccCCcchhhHHHHHHHHHHHHHHHHCCeEEEEEeCC
Confidence 589999999999873 15778999999999999999999973
No 105
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=99.13 E-value=1.8e-09 Score=97.88 Aligned_cols=45 Identities=22% Similarity=0.282 Sum_probs=37.0
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEecCCCCc
Q 017785 284 GKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSL 336 (366)
Q Consensus 284 gKP~p~~~~~a~~~lgv~~~~vl~VGDs~~~Di~~a~~aG~~tv~V~~G~~~~ 336 (366)
.||++.. .++++++ +++|||+. +|+++|++||++++.|.+|..+.
T Consensus 173 ~K~~K~~---~l~~~~i----~I~IGDs~-~Di~aA~~AGi~~I~v~~G~~~~ 217 (237)
T PRK11009 173 GQYTKTQ---WLKKKNI----RIFYGDSD-NDITAAREAGARGIRILRAANST 217 (237)
T ss_pred CCCCHHH---HHHhcCC----eEEEcCCH-HHHHHHHHcCCcEEEEecCCCCC
Confidence 5666653 4556665 99999997 99999999999999999997654
No 106
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=99.12 E-value=1.9e-10 Score=101.78 Aligned_cols=47 Identities=15% Similarity=0.114 Sum_probs=40.2
Q ss_pred CCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEecC
Q 017785 285 KPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSG 332 (366)
Q Consensus 285 KP~p~~~~~a~~~lgv~~~~vl~VGDs~~~Di~~a~~aG~~tv~V~~G 332 (366)
++++..+..+++++|+++++|++|||+. +|+++++++|+..+....+
T Consensus 146 ~~k~~~~~~~~~~~~~~~~~~i~iGDs~-~D~~~a~~ag~~~a~~~~~ 192 (201)
T TIGR01491 146 DNKGEAVERLKRELNPSLTETVAVGDSK-NDLPMFEVADISISLGDEG 192 (201)
T ss_pred ccHHHHHHHHHHHhCCCHHHEEEEcCCH-hHHHHHHhcCCeEEECCCc
Confidence 4455789999999999999999999997 9999999999977654443
No 107
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=99.11 E-value=3.4e-09 Score=97.21 Aligned_cols=67 Identities=15% Similarity=0.002 Sum_probs=56.9
Q ss_pred HHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHc-------CCcEEEEecCCCCcccccCCCCCCCCCEEECChhHHHH
Q 017785 288 TFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNG-------GCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLS 360 (366)
Q Consensus 288 p~~~~~a~~~lgv~~~~vl~VGDs~~~Di~~a~~a-------G~~tv~V~~G~~~~~~l~~~~~~~~pd~v~~sl~~l~~ 360 (366)
...+..++++++++++++++|||+. ||+.|++.+ |..++.|..|. .. ..++|++++..++.+
T Consensus 169 g~a~~~~~~~~~~~~~~~i~iGD~~-~D~~~~~~~~~~~~~~g~~~v~v~~g~-----~~-----~~A~~~~~~~~~v~~ 237 (244)
T TIGR00685 169 GEIVKRLLWHQPGSGISPVYLGDDI-TDEDAFRVVNNQWGNYGFYPVPIGSGS-----KK-----TVAKFHLTGPQQVLE 237 (244)
T ss_pred HHHHHHHHHhcccCCCceEEEcCCC-cHHHHHHHHhcccCCCCeEEEEEecCC-----cC-----CCceEeCCCHHHHHH
Confidence 5889999999999999999999997 999999999 77788877442 11 368999999999999
Q ss_pred HHHhh
Q 017785 361 LKAAA 365 (366)
Q Consensus 361 ~~~~~ 365 (366)
++...
T Consensus 238 ~L~~l 242 (244)
T TIGR00685 238 FLGLL 242 (244)
T ss_pred HHHHH
Confidence 88654
No 108
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=99.10 E-value=7.3e-10 Score=111.06 Aligned_cols=48 Identities=27% Similarity=0.396 Sum_probs=41.2
Q ss_pred ccCcEEEEecceeEEeCC-------------EeCCCHHHHHHHHHHCCCeEEEEeCCCCCC
Q 017785 81 DSVETFIFDCDGVIWKGD-------------KLIDGVPETLDMLRSKGKRLVFVTNNSTKS 128 (366)
Q Consensus 81 ~~ik~viFDiDGTL~d~~-------------~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~ 128 (366)
...|+++||+||||+.+. -++|++.+.|+.|.+.|+.++++||+++..
T Consensus 166 ~~~Kia~fD~DGTLi~t~sg~~~~~~~~d~~~l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~ 226 (526)
T TIGR01663 166 GQEKIAGFDLDGTIIKTKSGKVFPKGPDDWQIIFPEIPEKLKELEADGFKICIFTNQGGIA 226 (526)
T ss_pred ccCcEEEEECCCCccccCCCccCCCCHHHeeecccCHHHHHHHHHHCCCEEEEEECCcccc
Confidence 457899999999999643 247999999999999999999999987654
No 109
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=99.10 E-value=2.8e-09 Score=94.82 Aligned_cols=52 Identities=29% Similarity=0.459 Sum_probs=44.2
Q ss_pred EEEEecceeEEeCC--EeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhc
Q 017785 85 TFIFDCDGVIWKGD--KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETL 139 (366)
Q Consensus 85 ~viFDiDGTL~d~~--~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~l 139 (366)
.++||+||||++.+ ++.+.+.++|++|+++|+.++++| ||+...+...++.+
T Consensus 1 li~~D~DgTL~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T---GR~~~~~~~~~~~~ 54 (204)
T TIGR01484 1 LLFFDLDGTLLDPNAHELSPETIEALERLREAGVKVVLVT---GRSLAEIKELLKQL 54 (204)
T ss_pred CEEEeCcCCCcCCCCCcCCHHHHHHHHHHHHCCCEEEEEC---CCCHHHHHHHHHhC
Confidence 47999999999864 566778899999999999999999 78888888777664
No 110
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=99.07 E-value=2.6e-10 Score=99.27 Aligned_cols=102 Identities=22% Similarity=0.153 Sum_probs=73.8
Q ss_pred HhHHHHHHHHHcCCCcEEEEecCCceeecCCCccccCCCccceeeeeeec---CcccccCCCcHHHHHHHHHHcCCC-CC
Q 017785 228 YKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQ---REPLVVGKPSTFMMDYLANKFGIQ-KS 303 (366)
Q Consensus 228 ~~l~~a~~~l~~~~g~~~i~sn~d~~~~~~~~~~~~~~~~~~~~~~~~~~---~e~~~~gKP~p~~~~~a~~~lgv~-~~ 303 (366)
..+...+..++... ..+.||.+.. +........|....++.+...-- .+..++-||++.+|+.+.+..|++ |.
T Consensus 103 ~~LRnlLL~l~~r~--k~~FTNa~k~-HA~r~Lk~LGieDcFegii~~e~~np~~~~~vcKP~~~afE~a~k~agi~~p~ 179 (244)
T KOG3109|consen 103 PVLRNLLLSLKKRR--KWIFTNAYKV-HAIRILKKLGIEDCFEGIICFETLNPIEKTVVCKPSEEAFEKAMKVAGIDSPR 179 (244)
T ss_pred HHHHHHHHhCcccc--EEEecCCcHH-HHHHHHHHhChHHhccceeEeeccCCCCCceeecCCHHHHHHHHHHhCCCCcC
Confidence 44666666665322 6777999884 33444444454433333332222 235678999999999999999997 99
Q ss_pred cEEEEcCCchhhHHHHHHcCCcEEEEecCC
Q 017785 304 QICMVGDRLDTDILFGQNGGCKTLLVLSGV 333 (366)
Q Consensus 304 ~vl~VGDs~~~Di~~a~~aG~~tv~V~~G~ 333 (366)
++++|.|+. +.|+.|++.||++|+|....
T Consensus 180 ~t~FfDDS~-~NI~~ak~vGl~tvlv~~~~ 208 (244)
T KOG3109|consen 180 NTYFFDDSE-RNIQTAKEVGLKTVLVGREH 208 (244)
T ss_pred ceEEEcCch-hhHHHHHhccceeEEEEeee
Confidence 999999997 88999999999999997754
No 111
>PTZ00445 p36-lilke protein; Provisional
Probab=99.07 E-value=5.3e-10 Score=97.73 Aligned_cols=48 Identities=15% Similarity=0.276 Sum_probs=45.3
Q ss_pred CCCcHHH--H--HHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEecC
Q 017785 284 GKPSTFM--M--DYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSG 332 (366)
Q Consensus 284 gKP~p~~--~--~~a~~~lgv~~~~vl~VGDs~~~Di~~a~~aG~~tv~V~~G 332 (366)
-||+|.+ | +++++++|++|++|++|-|+. ..+++|++.|++++.+..+
T Consensus 156 ~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~-~NVeaA~~lGi~ai~f~~~ 207 (219)
T PTZ00445 156 DAPMPLDKSYHLKQVCSDFNVNPDEILFIDDDM-NNCKNALKEGYIALHVTGN 207 (219)
T ss_pred cCCCccchHHHHHHHHHHcCCCHHHeEeecCCH-HHHHHHHHCCCEEEEcCCh
Confidence 7999999 9 999999999999999999998 8899999999999998754
No 112
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=99.02 E-value=1.3e-09 Score=93.23 Aligned_cols=44 Identities=27% Similarity=0.370 Sum_probs=34.8
Q ss_pred cCCCcHHHHHHHHHHcCC----CCCcEEEEcCCc----------hhhHHHHHHcCCcE
Q 017785 283 VGKPSTFMMDYLANKFGI----QKSQICMVGDRL----------DTDILFGQNGGCKT 326 (366)
Q Consensus 283 ~gKP~p~~~~~a~~~lgv----~~~~vl~VGDs~----------~~Di~~a~~aG~~t 326 (366)
+.||.+-+++++++.++. +.++++||||+. +.|...|.++|++.
T Consensus 95 ~RKP~~GM~~~~~~~~~~~~~id~~~Sf~VGDaagr~~~~~d~s~~D~~fA~N~gi~f 152 (159)
T PF08645_consen 95 CRKPNPGMWEFALKDYNDGVEIDLANSFYVGDAAGRSKKKKDFSDSDRKFALNCGIKF 152 (159)
T ss_dssp TSTTSSHHHHHHCCCTSTT--S-CCC-EEEESSCHCTB-S--S--HHHHHHHHHT--E
T ss_pred CCCCchhHHHHHHHhccccccccccceEEEeccCCCCCcccccChhHHHHHHHcCCcc
Confidence 389999999999999874 899999999961 38999999999874
No 113
>PTZ00174 phosphomannomutase; Provisional
Probab=99.01 E-value=4.8e-09 Score=96.38 Aligned_cols=54 Identities=22% Similarity=0.361 Sum_probs=46.9
Q ss_pred cCcEEEEecceeEEeCCE-eCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHh
Q 017785 82 SVETFIFDCDGVIWKGDK-LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFET 138 (366)
Q Consensus 82 ~ik~viFDiDGTL~d~~~-~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~ 138 (366)
.+|+|+|||||||+++++ +.+.+.++|++++++|+.++++| ||+...+.+.+..
T Consensus 4 ~~klia~DlDGTLL~~~~~is~~~~~ai~~l~~~Gi~~viaT---GR~~~~i~~~l~~ 58 (247)
T PTZ00174 4 KKTILLFDVDGTLTKPRNPITQEMKDTLAKLKSKGFKIGVVG---GSDYPKIKEQLGE 58 (247)
T ss_pred CCeEEEEECcCCCcCCCCCCCHHHHHHHHHHHHCCCEEEEEc---CCCHHHHHHHHhh
Confidence 489999999999998764 66778999999999999999999 7888888766653
No 114
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.00 E-value=8.5e-09 Score=95.16 Aligned_cols=58 Identities=17% Similarity=0.233 Sum_probs=51.5
Q ss_pred CcEEEEecceeEEeCC-EeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCCC
Q 017785 83 VETFIFDCDGVIWKGD-KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTV 143 (366)
Q Consensus 83 ik~viFDiDGTL~d~~-~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~~ 143 (366)
+|.|++||||||+|.+ ..++.+.++|++|+++|++++++| ||+..++...+++++++.
T Consensus 1 ~KLIftDLDGTLLd~~~~~~~~a~~aL~~Lk~~GI~vVlaT---GRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 1 MRLVLSSLDGSLLDLEFNSYGAARQALAALERRSIPLVLYS---LRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred CcEEEEeCCCCCcCCCCcCCHHHHHHHHHHHHCCCEEEEEc---CCCHHHHHHHHHHhCCCC
Confidence 4789999999999944 477779999999999999999999 799999998889999863
No 115
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=98.99 E-value=3.1e-09 Score=95.44 Aligned_cols=74 Identities=11% Similarity=0.008 Sum_probs=52.8
Q ss_pred cCCCcHHHH----------HHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEecCCCCcccccCCCCCCCCCEEE
Q 017785 283 VGKPSTFMM----------DYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYT 352 (366)
Q Consensus 283 ~gKP~p~~~----------~~a~~~lgv~~~~vl~VGDs~~~Di~~a~~aG~~tv~V~~G~~~~~~l~~~~~~~~pd~v~ 352 (366)
..||+|..+ ..++++++..+++|++|||+. +|+.+|+.||+ +.++..... ..+ ....|.+.+
T Consensus 127 ~~~p~~~~~~~~~~cg~~K~~~l~~~~~~~~~~i~iGDg~-~D~~~a~~Ad~--~~ar~~l~~--~~~---~~~~~~~~~ 198 (214)
T TIGR03333 127 IDWPHPCDGTCQNQCGCCKPSLIRKLSEPNDYHIVIGDSV-TDVEAAKQSDL--CFARDYLLN--ECE---ELGLNHAPF 198 (214)
T ss_pred EeCCCCCccccccCCCCCHHHHHHHHhhcCCcEEEEeCCH-HHHHHHHhCCe--eEehHHHHH--HHH---HcCCCccCc
Confidence 367777665 367788888899999999997 99999999997 444431111 111 112477778
Q ss_pred CChhHHHHHHHh
Q 017785 353 NKISDFLSLKAA 364 (366)
Q Consensus 353 ~sl~~l~~~~~~ 364 (366)
+++.|+...+.+
T Consensus 199 ~~f~di~~~l~~ 210 (214)
T TIGR03333 199 QDFYDVRKELEN 210 (214)
T ss_pred CCHHHHHHHHHH
Confidence 999999887754
No 116
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=98.95 E-value=4.1e-08 Score=100.01 Aligned_cols=58 Identities=21% Similarity=0.240 Sum_probs=50.6
Q ss_pred cCcEEEEecceeEEeCCE-eCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCC
Q 017785 82 SVETFIFDCDGVIWKGDK-LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT 142 (366)
Q Consensus 82 ~ik~viFDiDGTL~d~~~-~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~ 142 (366)
..|+|++|+||||++.+. ..+.+.++|++++++|++++++| ||+...+...++.+|++
T Consensus 415 ~~KLIfsDLDGTLLd~d~~i~~~t~eAL~~L~ekGI~~VIAT---GRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 415 FKKIVYTDLDGTLLNPLTYSYSTALDALRLLKDKELPLVFCS---AKTMGEQDLYRNELGIK 473 (694)
T ss_pred eeeEEEEECcCCCcCCCCccCHHHHHHHHHHHHcCCeEEEEe---CCCHHHHHHHHHHcCCC
Confidence 467999999999998654 56678999999999999999999 88999888888888874
No 117
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=98.91 E-value=5.4e-09 Score=88.36 Aligned_cols=44 Identities=16% Similarity=0.082 Sum_probs=37.5
Q ss_pred CcccccCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCc
Q 017785 278 REPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCK 325 (366)
Q Consensus 278 ~e~~~~gKP~p~~~~~a~~~lgv~~~~vl~VGDs~~~Di~~a~~aG~~ 325 (366)
.+....+||+ |.++++++|.+|++|++|||++ +|+++++++|+.
T Consensus 94 ~~d~~~~KP~---~~k~l~~l~~~p~~~i~i~Ds~-~~~~aa~~ngI~ 137 (148)
T smart00577 94 RDECVFVKGK---YVKDLSLLGRDLSNVIIIDDSP-DSWPFHPENLIP 137 (148)
T ss_pred CccccccCCe---EeecHHHcCCChhcEEEEECCH-HHhhcCccCEEE
Confidence 3334447887 9999999999999999999998 999999999854
No 118
>PLN02382 probable sucrose-phosphatase
Probab=98.90 E-value=9.4e-08 Score=94.06 Aligned_cols=47 Identities=19% Similarity=0.197 Sum_probs=40.1
Q ss_pred CCCcHHHHHHHHHHc---CCCCCcEEEEcCCchhhHHHHHHcCCcEEEEec
Q 017785 284 GKPSTFMMDYLANKF---GIQKSQICMVGDRLDTDILFGQNGGCKTLLVLS 331 (366)
Q Consensus 284 gKP~p~~~~~a~~~l---gv~~~~vl~VGDs~~~Di~~a~~aG~~tv~V~~ 331 (366)
+--+.....++++++ |++++++++|||+. ||++|.+.+|..+|.|..
T Consensus 173 g~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~-NDleMl~~ag~~gvam~N 222 (413)
T PLN02382 173 GAGKGQALAYLLKKLKAEGKAPVNTLVCGDSG-NDAELFSVPDVYGVMVSN 222 (413)
T ss_pred CCCHHHHHHHHHHHhhhcCCChhcEEEEeCCH-HHHHHHhcCCCCEEEEcC
Confidence 444578899999999 99999999999997 999999999976666644
No 119
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=98.83 E-value=1.3e-08 Score=97.15 Aligned_cols=41 Identities=10% Similarity=0.020 Sum_probs=38.4
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCc
Q 017785 284 GKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCK 325 (366)
Q Consensus 284 gKP~p~~~~~a~~~lgv~~~~vl~VGDs~~~Di~~a~~aG~~ 325 (366)
.||+|+.+..+++++|+.++++++|||++ .|+.++++++-.
T Consensus 85 ~~pk~~~i~~~~~~l~i~~~~~vfidD~~-~d~~~~~~~lp~ 125 (320)
T TIGR01686 85 WGPKSESLRKIAKKLNLGTDSFLFIDDNP-AERANVKITLPV 125 (320)
T ss_pred cCchHHHHHHHHHHhCCCcCcEEEECCCH-HHHHHHHHHCCC
Confidence 58999999999999999999999999998 999999997754
No 120
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.77 E-value=1.3e-08 Score=84.27 Aligned_cols=39 Identities=21% Similarity=0.329 Sum_probs=35.0
Q ss_pred HHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCcEE
Q 017785 288 TFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTL 327 (366)
Q Consensus 288 p~~~~~a~~~lgv~~~~vl~VGDs~~~Di~~a~~aG~~tv 327 (366)
...|..+++++++.+++|.+|||.+ +|+....+.|+..+
T Consensus 85 ~~a~~~L~~~~~l~~e~~ayiGDD~-~Dlpvm~~vGls~a 123 (170)
T COG1778 85 LAAFEELLKKLNLDPEEVAYVGDDL-VDLPVMEKVGLSVA 123 (170)
T ss_pred HHHHHHHHHHhCCCHHHhhhhcCcc-ccHHHHHHcCCccc
Confidence 4557789999999999999999998 99999999997765
No 121
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=98.74 E-value=1.5e-07 Score=82.19 Aligned_cols=39 Identities=18% Similarity=0.180 Sum_probs=32.6
Q ss_pred ccCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCC
Q 017785 282 VVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGC 324 (366)
Q Consensus 282 ~~gKP~p~~~~~a~~~lgv~~~~vl~VGDs~~~Di~~a~~aG~ 324 (366)
..|.+++.+++.+.+.. ++++++|||+. +|+.+|+++++
T Consensus 145 ~~g~~K~~~~~~~~~~~---~~~~i~iGD~~-~D~~aa~~~d~ 183 (188)
T TIGR01489 145 PCGCCKGKVIHKLSEPK---YQHIIYIGDGV-TDVCPAKLSDV 183 (188)
T ss_pred CCCCCHHHHHHHHHhhc---CceEEEECCCc-chhchHhcCCc
Confidence 34666688888887765 79999999998 99999999864
No 122
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=98.71 E-value=6.5e-07 Score=94.58 Aligned_cols=67 Identities=12% Similarity=-0.011 Sum_probs=51.5
Q ss_pred CcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEecCCCCcccccCCCCCCCCCEEECChhHHHHHHHhh
Q 017785 286 PSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKAAA 365 (366)
Q Consensus 286 P~p~~~~~a~~~lgv~~~~vl~VGDs~~~Di~~a~~aG~~tv~V~~G~~~~~~l~~~~~~~~pd~v~~sl~~l~~~~~~~ 365 (366)
-+..+...+++ +++++.+++|||+. ||+.|.+.++-....|.-|..+ ..++|++++.+|+.++++..
T Consensus 657 nKG~al~~ll~--~~~~d~vl~~GD~~-nDe~Mf~~~~~~~~~v~vG~~~----------s~A~~~l~~~~eV~~~L~~l 723 (726)
T PRK14501 657 NKGRAVRRLLE--AGPYDFVLAIGDDT-TDEDMFRALPETAITVKVGPGE----------SRARYRLPSQREVRELLRRL 723 (726)
T ss_pred CHHHHHHHHHh--cCCCCEEEEECCCC-ChHHHHHhcccCceEEEECCCC----------CcceEeCCCHHHHHHHHHHH
Confidence 34777888888 78889999999998 9999999985434445445422 25899999999988887653
No 123
>PLN02423 phosphomannomutase
Probab=98.63 E-value=3.7e-07 Score=83.78 Aligned_cols=53 Identities=17% Similarity=0.170 Sum_probs=42.0
Q ss_pred cCcEEE-EecceeEEeCCEe-CCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHh
Q 017785 82 SVETFI-FDCDGVIWKGDKL-IDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFET 138 (366)
Q Consensus 82 ~ik~vi-FDiDGTL~d~~~~-~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~ 138 (366)
++++++ |||||||+++++. .+.+.++|++++++ +.++++| ||+...+.+.+..
T Consensus 5 ~~~~i~~~D~DGTLl~~~~~i~~~~~~ai~~l~~~-i~fviaT---GR~~~~~~~~~~~ 59 (245)
T PLN02423 5 KPGVIALFDVDGTLTAPRKEATPEMLEFMKELRKV-VTVGVVG---GSDLSKISEQLGK 59 (245)
T ss_pred ccceEEEEeccCCCcCCCCcCCHHHHHHHHHHHhC-CEEEEEC---CcCHHHHHHHhcc
Confidence 466665 9999999987654 45578999999977 9999999 7877777766643
No 124
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=98.56 E-value=1.1e-06 Score=78.14 Aligned_cols=69 Identities=13% Similarity=0.050 Sum_probs=48.3
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEecCCCCcccccCCCCCCCCCE-EECChhHHHHHH
Q 017785 284 GKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDF-YTNKISDFLSLK 362 (366)
Q Consensus 284 gKP~p~~~~~a~~~lgv~~~~vl~VGDs~~~Di~~a~~aG~~tv~V~~G~~~~~~l~~~~~~~~pd~-v~~sl~~l~~~~ 362 (366)
.||.+..+...++..|. +|++|||+. ||+.|++.+|+..++... +.+.+ ..||+ ++.+.++++..+
T Consensus 129 ~~~~K~~~l~~l~~~~~---~~v~vGDs~-nDl~ml~~Ag~~ia~~ak-----~~~~~----~~~~~~~~~~~~~~~~~~ 195 (203)
T TIGR02137 129 QKDPKRQSVIAFKSLYY---RVIAAGDSY-NDTTMLSEAHAGILFHAP-----ENVIR----EFPQFPAVHTYEDLKREF 195 (203)
T ss_pred CcchHHHHHHHHHhhCC---CEEEEeCCH-HHHHHHHhCCCCEEecCC-----HHHHH----hCCCCCcccCHHHHHHHH
Confidence 56666666666666664 899999997 999999999988886333 22221 12333 457888888887
Q ss_pred Hhh
Q 017785 363 AAA 365 (366)
Q Consensus 363 ~~~ 365 (366)
.++
T Consensus 196 ~~~ 198 (203)
T TIGR02137 196 LKA 198 (203)
T ss_pred HHH
Confidence 665
No 125
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=98.55 E-value=3.2e-07 Score=79.33 Aligned_cols=38 Identities=21% Similarity=0.243 Sum_probs=33.1
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHc
Q 017785 284 GKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNG 322 (366)
Q Consensus 284 gKP~p~~~~~a~~~lgv~~~~vl~VGDs~~~Di~~a~~a 322 (366)
+..++..+...++.+|+++++|++|||+. +|+.|++.+
T Consensus 140 ~~~K~~~l~~~~~~~~~~~~~~~~iGDs~-~D~~~~~~a 177 (177)
T TIGR01488 140 GECKGKVLKELLEESKITLKKIIAVGDSV-NDLPMLKLA 177 (177)
T ss_pred cchHHHHHHHHHHHhCCCHHHEEEEeCCH-HHHHHHhcC
Confidence 45567788888999999999999999997 999999864
No 126
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=98.51 E-value=1.9e-07 Score=82.75 Aligned_cols=45 Identities=16% Similarity=0.155 Sum_probs=40.3
Q ss_pred cCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCcEEE
Q 017785 283 VGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLL 328 (366)
Q Consensus 283 ~gKP~p~~~~~a~~~lgv~~~~vl~VGDs~~~Di~~a~~aG~~tv~ 328 (366)
.|+++...+...+++.++++++|+++||+. +|+++++.+|...+.
T Consensus 152 ~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~-~D~~~~~~a~~~~~v 196 (202)
T TIGR01490 152 KGEGKVHALAELLAEEQIDLKDSYAYGDSI-SDLPLLSLVGHPYVV 196 (202)
T ss_pred CChHHHHHHHHHHHHcCCCHHHcEeeeCCc-ccHHHHHhCCCcEEe
Confidence 467788889999999999999999999998 999999999977653
No 127
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=98.50 E-value=8.7e-07 Score=81.38 Aligned_cols=43 Identities=26% Similarity=0.434 Sum_probs=35.7
Q ss_pred cHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEec
Q 017785 287 STFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLS 331 (366)
Q Consensus 287 ~p~~~~~a~~~lgv~~~~vl~VGDs~~~Di~~a~~aG~~tv~V~~ 331 (366)
+..+..++++++++++++++++||+. ||+.|. ..+..+|.|..
T Consensus 166 K~~Al~~L~~~~~~~~~~vl~aGDSg-ND~~mL-~~~~~~vvV~N 208 (247)
T PF05116_consen 166 KGAALRYLMERWGIPPEQVLVAGDSG-NDLEML-EGGDHGVVVGN 208 (247)
T ss_dssp HHHHHHHHHHHHT--GGGEEEEESSG-GGHHHH-CCSSEEEE-TT
T ss_pred HHHHHHHHHHHhCCCHHHEEEEeCCC-CcHHHH-cCcCCEEEEcC
Confidence 47889999999999999999999998 999999 67778887765
No 128
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=98.44 E-value=1.9e-06 Score=91.79 Aligned_cols=55 Identities=22% Similarity=0.363 Sum_probs=44.6
Q ss_pred cCcEEEEecceeEEeCC----EeCCCHHHHHHHH-HHCCCeEEEEeCCCCCCHHHHHHHHHhc
Q 017785 82 SVETFIFDCDGVIWKGD----KLIDGVPETLDML-RSKGKRLVFVTNNSTKSRKQYGKKFETL 139 (366)
Q Consensus 82 ~ik~viFDiDGTL~d~~----~~~~~~~~ai~~l-~~~g~~~~~~Tn~sg~~~~~~~~~l~~l 139 (366)
+.+++++|+||||++.. .+.++..+.|++| ...|..++++| ||++..+.+.+...
T Consensus 595 ~~rlI~LDyDGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvS---GR~~~~L~~~f~~~ 654 (854)
T PLN02205 595 TTRAILLDYDGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVS---ARSRKTLADWFSPC 654 (854)
T ss_pred cCeEEEEecCCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEe---CCCHHHHHHHhCCC
Confidence 57899999999999654 3345678899998 67899999999 89999998887543
No 129
>PLN02580 trehalose-phosphatase
Probab=98.44 E-value=9e-06 Score=78.58 Aligned_cols=68 Identities=16% Similarity=0.138 Sum_probs=50.8
Q ss_pred CcHHHHHHHHHHcCCCCCc---EEEEcCCchhhHHHHHHc-----CCcEEEEecCCCCcccccCCCCCCCCCEEECChhH
Q 017785 286 PSTFMMDYLANKFGIQKSQ---ICMVGDRLDTDILFGQNG-----GCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISD 357 (366)
Q Consensus 286 P~p~~~~~a~~~lgv~~~~---vl~VGDs~~~Di~~a~~a-----G~~tv~V~~G~~~~~~l~~~~~~~~pd~v~~sl~~ 357 (366)
-+.....++++++|++..+ +++|||.. ||..|.+.. | .+|.|..+ ..+ ..+.|.+++..+
T Consensus 301 ~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~-TDedmF~~L~~~~~G-~~I~Vgn~--~~~--------t~A~y~L~dp~e 368 (384)
T PLN02580 301 NKGKAVEFLLESLGLSNCDDVLPIYIGDDR-TDEDAFKVLREGNRG-YGILVSSV--PKE--------SNAFYSLRDPSE 368 (384)
T ss_pred CHHHHHHHHHHhcCCCcccceeEEEECCCc-hHHHHHHhhhccCCc-eEEEEecC--CCC--------ccceEEcCCHHH
Confidence 4478889999999998663 38999997 999999963 4 34444432 211 358999999999
Q ss_pred HHHHHHhh
Q 017785 358 FLSLKAAA 365 (366)
Q Consensus 358 l~~~~~~~ 365 (366)
+.++|...
T Consensus 369 V~~~L~~L 376 (384)
T PLN02580 369 VMEFLKSL 376 (384)
T ss_pred HHHHHHHH
Confidence 99988653
No 130
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=98.36 E-value=4.2e-06 Score=71.37 Aligned_cols=45 Identities=27% Similarity=0.383 Sum_probs=39.0
Q ss_pred EEEEecceeEEeCC------------EeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHH
Q 017785 85 TFIFDCDGVIWKGD------------KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQY 132 (366)
Q Consensus 85 ~viFDiDGTL~d~~------------~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~ 132 (366)
.|+||+||||++++ .+.+++.+++++++++|++++++| ||+....
T Consensus 1 iVisDIDGTL~~sd~~~~~~~~~~~~~~~~~~~~a~~~l~~~G~~ivy~T---GRp~~~~ 57 (157)
T smart00775 1 IVISDIDGTITKSDVLGHVVPIIGKDWTHPGVAKLYRDIQNNGYKILYLT---ARPIGQA 57 (157)
T ss_pred CEEEecCCCCcccccccccccccccCcCCHHHHHHHHHHHHcCCeEEEEc---CCcHHHH
Confidence 48999999999875 667889999999999999999999 5666654
No 131
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=98.36 E-value=2.8e-06 Score=75.50 Aligned_cols=39 Identities=23% Similarity=0.436 Sum_probs=37.9
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcC
Q 017785 284 GKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGG 323 (366)
Q Consensus 284 gKP~p~~~~~a~~~lgv~~~~vl~VGDs~~~Di~~a~~aG 323 (366)
+||++.+|..+++.+++++++|+||||+. ||+.|+++||
T Consensus 177 ~kP~~k~~~~~i~~l~~~~~~v~~vGDg~-nD~~al~~Ag 215 (215)
T PF00702_consen 177 GKPEPKIFLRIIKELQVKPGEVAMVGDGV-NDAPALKAAG 215 (215)
T ss_dssp TTTHHHHHHHHHHHHTCTGGGEEEEESSG-GHHHHHHHSS
T ss_pred ccccchhHHHHHHHHhcCCCEEEEEccCH-HHHHHHHhCc
Confidence 79999999999999999999999999998 9999999997
No 132
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.35 E-value=5.1e-06 Score=74.45 Aligned_cols=44 Identities=20% Similarity=0.297 Sum_probs=38.4
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCcEEE
Q 017785 284 GKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLL 328 (366)
Q Consensus 284 gKP~p~~~~~a~~~lgv~~~~vl~VGDs~~~Di~~a~~aG~~tv~ 328 (366)
++-+.......++.+|+++++++++||+. ||+.|.+.+|...+.
T Consensus 142 ~~~K~~~l~~~~~~~g~~~~~~~a~gDs~-nDlpml~~ag~~ia~ 185 (212)
T COG0560 142 GEGKAKALRELAAELGIPLEETVAYGDSA-NDLPMLEAAGLPIAV 185 (212)
T ss_pred cchHHHHHHHHHHHcCCCHHHeEEEcCch-hhHHHHHhCCCCeEe
Confidence 34456778899999999999999999997 999999999977664
No 133
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=98.34 E-value=3.5e-06 Score=77.79 Aligned_cols=61 Identities=25% Similarity=0.441 Sum_probs=46.0
Q ss_pred ccCcEEEEecceeEEeCC---------------------------EeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHH
Q 017785 81 DSVETFIFDCDGVIWKGD---------------------------KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYG 133 (366)
Q Consensus 81 ~~ik~viFDiDGTL~d~~---------------------------~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~ 133 (366)
++..+|+||||+|++|+. .++|++.+.++.++++|++++++||+....+....
T Consensus 73 ~kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~ 152 (266)
T TIGR01533 73 DKKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATL 152 (266)
T ss_pred CCCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcCCCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHH
Confidence 345699999999998632 34788899999999999999999987655555555
Q ss_pred HHHHhcCC
Q 017785 134 KKFETLGL 141 (366)
Q Consensus 134 ~~l~~lG~ 141 (366)
..|+.+|+
T Consensus 153 ~~Lkk~Gi 160 (266)
T TIGR01533 153 KNLKRFGF 160 (266)
T ss_pred HHHHHcCc
Confidence 44444444
No 134
>PLN03017 trehalose-phosphatase
Probab=98.33 E-value=1.6e-05 Score=76.16 Aligned_cols=71 Identities=13% Similarity=0.086 Sum_probs=49.7
Q ss_pred CcHHHHHHHHHHcCCCC---CcEEEEcCCchhhHHHHHHcC-C-cEEEEecCCCCcccccCCCCCCCCCEEECChhHHHH
Q 017785 286 PSTFMMDYLANKFGIQK---SQICMVGDRLDTDILFGQNGG-C-KTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLS 360 (366)
Q Consensus 286 P~p~~~~~a~~~lgv~~---~~vl~VGDs~~~Di~~a~~aG-~-~tv~V~~G~~~~~~l~~~~~~~~pd~v~~sl~~l~~ 360 (366)
-+....+++++.++... .-+++|||.. +|-.|-+... . ..+.|.=|..+.+ ..+.|.+++..++.+
T Consensus 283 dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~-TDEDaF~~L~~~~~G~gI~VG~~~k~--------T~A~y~L~dp~eV~~ 353 (366)
T PLN03017 283 DKGKALEFLLESLGFGNTNNVFPVYIGDDR-TDEDAFKMLRDRGEGFGILVSKFPKD--------TDASYSLQDPSEVMD 353 (366)
T ss_pred CHHHHHHHHHHhcccccCCCceEEEeCCCC-ccHHHHHHHhhcCCceEEEECCCCCC--------CcceEeCCCHHHHHH
Confidence 34688899999998753 3589999997 9999988662 2 1233333322211 258999999999998
Q ss_pred HHHhh
Q 017785 361 LKAAA 365 (366)
Q Consensus 361 ~~~~~ 365 (366)
+|...
T Consensus 354 fL~~L 358 (366)
T PLN03017 354 FLARL 358 (366)
T ss_pred HHHHH
Confidence 88653
No 135
>PLN02151 trehalose-phosphatase
Probab=98.25 E-value=3.6e-05 Score=73.58 Aligned_cols=68 Identities=12% Similarity=0.081 Sum_probs=47.9
Q ss_pred cHHHHHHHHHHcCCCCC---cEEEEcCCchhhHHHHHHcCC----cEEEEecCCCCcccccCCCCCCCCCEEECChhHHH
Q 017785 287 STFMMDYLANKFGIQKS---QICMVGDRLDTDILFGQNGGC----KTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFL 359 (366)
Q Consensus 287 ~p~~~~~a~~~lgv~~~---~vl~VGDs~~~Di~~a~~aG~----~tv~V~~G~~~~~~l~~~~~~~~pd~v~~sl~~l~ 359 (366)
+......+++.++..-. -+++|||.. +|-.|-+...- .+|.| |....+ ..++|.+++..++.
T Consensus 270 KG~Av~~Ll~~~~~~~~~~~~pvyiGDD~-TDEDaF~~L~~~~~G~gI~V--g~~~k~--------T~A~y~L~dp~eV~ 338 (354)
T PLN02151 270 KGKALEFLLESLGYANCTDVFPIYIGDDR-TDEDAFKILRDKKQGLGILV--SKYAKE--------TNASYSLQEPDEVM 338 (354)
T ss_pred HHHHHHHHHHhcccccCCCCeEEEEcCCC-cHHHHHHHHhhcCCCccEEe--ccCCCC--------CcceEeCCCHHHHH
Confidence 46788889998886532 289999997 99999875521 23444 322211 35899999999999
Q ss_pred HHHHhh
Q 017785 360 SLKAAA 365 (366)
Q Consensus 360 ~~~~~~ 365 (366)
+++...
T Consensus 339 ~~L~~L 344 (354)
T PLN02151 339 EFLERL 344 (354)
T ss_pred HHHHHH
Confidence 888653
No 136
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=98.25 E-value=2e-06 Score=70.18 Aligned_cols=43 Identities=21% Similarity=0.287 Sum_probs=34.5
Q ss_pred CcEEEEecceeEEeCC-E------eCCCHHHHHHHHHHCCCeEEEEeCCC
Q 017785 83 VETFIFDCDGVIWKGD-K------LIDGVPETLDMLRSKGKRLVFVTNNS 125 (366)
Q Consensus 83 ik~viFDiDGTL~d~~-~------~~~~~~~ai~~l~~~g~~~~~~Tn~s 125 (366)
+|+|+||+||||++.+ . +.+.+.+++++++++|..++++|..+
T Consensus 1 ~K~i~~DiDGTL~~~~~~~y~~~~~~~~~ie~L~~l~~~G~~IiiaTGR~ 50 (126)
T TIGR01689 1 MKRLVMDLDNTITLTENGDYANVAPILAVIEKLRHYKALGFEIVISSSRN 50 (126)
T ss_pred CCEEEEeCCCCcccCCCCcccccccCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 4799999999999743 1 34567888888899999999999543
No 137
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=98.18 E-value=3.8e-06 Score=77.63 Aligned_cols=69 Identities=16% Similarity=0.247 Sum_probs=54.6
Q ss_pred hccCcEEEEecceeEEeCCEe----CCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCCCCcCceecc
Q 017785 80 IDSVETFIFDCDGVIWKGDKL----IDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFAS 151 (366)
Q Consensus 80 ~~~ik~viFDiDGTL~d~~~~----~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~~~~~~i~~~ 151 (366)
+...+.|+||+||||++.+.- -|++.++|+.|+++|++++++|+ .++......++.+|++-.-+.++..
T Consensus 123 ~~~~kvIvFDLDgTLi~~~~~v~irdPgV~EaL~~LkekGikLaIaTS---~~Re~v~~~L~~lGLd~YFdvIIs~ 195 (301)
T TIGR01684 123 FEPPHVVVFDLDSTLITDEEPVRIRDPRIYDSLTELKKRGCILVLWSY---GDRDHVVESMRKVKLDRYFDIIISG 195 (301)
T ss_pred cccceEEEEecCCCCcCCCCccccCCHHHHHHHHHHHHCCCEEEEEEC---CCHHHHHHHHHHcCCCcccCEEEEC
Confidence 456889999999999987653 48899999999999999999996 3566666788999996433444443
No 138
>PRK08238 hypothetical protein; Validated
Probab=98.05 E-value=1.5e-05 Score=79.91 Aligned_cols=95 Identities=18% Similarity=0.088 Sum_probs=53.6
Q ss_pred HhHHHHHHHHHcCCCcEEEEecCCceeecCCCccccCCCccceeeeeeecCcccccCCCcHHHHHHHHHHcCCCCCcEEE
Q 017785 228 YKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICM 307 (366)
Q Consensus 228 ~~l~~a~~~l~~~~g~~~i~sn~d~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~gKP~p~~~~~a~~~lgv~~~~vl~ 307 (366)
+...+.+..+++++....++|+........ ..... +.++...+.+.....||++.. ..+.+.++ .+++++
T Consensus 75 pga~e~L~~lk~~G~~v~LaTas~~~~a~~----i~~~l---GlFd~Vigsd~~~~~kg~~K~-~~l~~~l~--~~~~~y 144 (479)
T PRK08238 75 EEVLDYLRAERAAGRKLVLATASDERLAQA----VAAHL---GLFDGVFASDGTTNLKGAAKA-AALVEAFG--ERGFDY 144 (479)
T ss_pred hhHHHHHHHHHHCCCEEEEEeCCCHHHHHH----HHHHc---CCCCEEEeCCCccccCCchHH-HHHHHHhC--ccCeeE
Confidence 344455555554434455666665532110 00000 113444444444446665543 23446665 367999
Q ss_pred EcCCchhhHHHHHHcCCcEEEEecCCC
Q 017785 308 VGDRLDTDILFGQNGGCKTLLVLSGVT 334 (366)
Q Consensus 308 VGDs~~~Di~~a~~aG~~tv~V~~G~~ 334 (366)
+||+. +|+.+++.+| +.+.|..+..
T Consensus 145 vGDS~-~Dlp~~~~A~-~av~Vn~~~~ 169 (479)
T PRK08238 145 AGNSA-ADLPVWAAAR-RAIVVGASPG 169 (479)
T ss_pred ecCCH-HHHHHHHhCC-CeEEECCCHH
Confidence 99997 9999999999 8888876543
No 139
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=98.05 E-value=5.1e-05 Score=70.27 Aligned_cols=33 Identities=18% Similarity=0.205 Sum_probs=29.0
Q ss_pred HHHHHHHHHcC--CCCCcEEEEcCCchhhHHHHHHc
Q 017785 289 FMMDYLANKFG--IQKSQICMVGDRLDTDILFGQNG 322 (366)
Q Consensus 289 ~~~~~a~~~lg--v~~~~vl~VGDs~~~Di~~a~~a 322 (366)
.+++.+++.++ .++++|++|||+. +|+.||...
T Consensus 196 ~v~~~~~~~~~~~~~~~~vI~vGDs~-~Dl~ma~g~ 230 (277)
T TIGR01544 196 DVALRNTEYFNQLKDRSNIILLGDSQ-GDLRMADGV 230 (277)
T ss_pred HHHHHHHHHhCccCCcceEEEECcCh-hhhhHhcCC
Confidence 66778899999 8999999999998 999997655
No 140
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=98.04 E-value=8.3e-06 Score=70.06 Aligned_cols=50 Identities=22% Similarity=0.216 Sum_probs=36.0
Q ss_pred CcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEecCCCCc
Q 017785 286 PSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSL 336 (366)
Q Consensus 286 P~p~~~~~a~~~lgv~~~~vl~VGDs~~~Di~~a~~aG~~tv~V~~G~~~~ 336 (366)
.+-.-|..+.+..|++.+++++|-|.. ..++-.++.|+.+|+|..|.+..
T Consensus 108 sK~~Hf~~i~~~tgI~y~eMlFFDDe~-~N~~~v~~lGV~~v~v~~Glt~~ 157 (169)
T PF12689_consen 108 SKTTHFRRIHRKTGIPYEEMLFFDDES-RNIEVVSKLGVTCVLVPDGLTWD 157 (169)
T ss_dssp -HHHHHHHHHHHH---GGGEEEEES-H-HHHHHHHTTT-EEEE-SSS--HH
T ss_pred chHHHHHHHHHhcCCChhHEEEecCch-hcceeeEecCcEEEEeCCCCCHH
Confidence 345668889999999999999999997 88999999999999999988654
No 141
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=98.03 E-value=4.3e-05 Score=65.05 Aligned_cols=66 Identities=15% Similarity=0.113 Sum_probs=51.7
Q ss_pred cCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEE-ecCCCCcccccCCCCCCCCCEEECChh
Q 017785 283 VGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLV-LSGVTSLSMLQSPNNSIQPDFYTNKIS 356 (366)
Q Consensus 283 ~gKP~p~~~~~a~~~lgv~~~~vl~VGDs~~~Di~~a~~aG~~tv~V-~~G~~~~~~l~~~~~~~~pd~v~~sl~ 356 (366)
-+|-...-|..+++..|++|.+++++.|++ ..+.+|+.+||.|+++ +.|+.+..+- .-..+++|+.
T Consensus 158 G~KrE~~SY~kIa~~iGl~p~eilFLSDn~-~EL~AA~~vGl~t~l~~R~g~~P~~d~-------~~~~~~~sf~ 224 (229)
T COG4229 158 GKKRESQSYAKIAGDIGLPPAEILFLSDNP-EELKAAAGVGLATGLAVRPGNAPVPDG-------QGFLVYKSFE 224 (229)
T ss_pred cccccchhHHHHHHhcCCCchheEEecCCH-HHHHHHHhcchheeeeecCCCCCCCCC-------cCceeeechh
Confidence 356666779999999999999999999999 9999999999999986 4465544331 2345666665
No 142
>PRK11590 hypothetical protein; Provisional
Probab=97.98 E-value=5.3e-05 Score=67.80 Aligned_cols=35 Identities=14% Similarity=-0.082 Sum_probs=27.6
Q ss_pred HHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCcEE
Q 017785 292 DYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTL 327 (366)
Q Consensus 292 ~~a~~~lgv~~~~vl~VGDs~~~Di~~a~~aG~~tv 327 (366)
..+-+.+|.+.+.+++-||+. +|+.|.+.+|-..+
T Consensus 166 ~~l~~~~~~~~~~~~aY~Ds~-~D~pmL~~a~~~~~ 200 (211)
T PRK11590 166 AQLERKIGTPLRLYSGYSDSK-QDNPLLYFCQHRWR 200 (211)
T ss_pred HHHHHHhCCCcceEEEecCCc-ccHHHHHhCCCCEE
Confidence 344455577788899999997 99999999995443
No 143
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=97.91 E-value=0.00018 Score=73.96 Aligned_cols=42 Identities=19% Similarity=0.332 Sum_probs=36.4
Q ss_pred cCcEEEEecceeEEe----CCEeCCCHHHHHHHHHHCCCeEEEEeC
Q 017785 82 SVETFIFDCDGVIWK----GDKLIDGVPETLDMLRSKGKRLVFVTN 123 (366)
Q Consensus 82 ~ik~viFDiDGTL~d----~~~~~~~~~~ai~~l~~~g~~~~~~Tn 123 (366)
....+.++.||+++- .+.+.|++.++++.|++.|+++.++|+
T Consensus 384 g~~~~~~~~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSg 429 (562)
T TIGR01511 384 GSTSVLVAVNGELAGVFALEDQLRPEAKEVIQALKRRGIEPVMLTG 429 (562)
T ss_pred CCEEEEEEECCEEEEEEEecccccHHHHHHHHHHHHcCCeEEEEcC
Confidence 456788999998864 677899999999999999999999996
No 144
>PRK10671 copA copper exporting ATPase; Provisional
Probab=97.88 E-value=0.00072 Score=72.80 Aligned_cols=115 Identities=14% Similarity=0.044 Sum_probs=70.7
Q ss_pred CHHhHHHHHHHHHcCCCcEEEEecCCceeecCCCccccCCCccceeeeeeecCcccccCCCcHHHHHHHHHHcCCCCCcE
Q 017785 226 NYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQI 305 (366)
Q Consensus 226 ~y~~l~~a~~~l~~~~g~~~i~sn~d~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~gKP~p~~~~~a~~~lgv~~~~v 305 (366)
.+++..+.+..+++..-...++|+...... .......+ +...+.. -.|+--..++++++.++++|
T Consensus 651 ~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a-~~ia~~lg---i~~~~~~-----------~~p~~K~~~i~~l~~~~~~v 715 (834)
T PRK10671 651 LRSDSVAALQRLHKAGYRLVMLTGDNPTTA-NAIAKEAG---IDEVIAG-----------VLPDGKAEAIKRLQSQGRQV 715 (834)
T ss_pred chhhHHHHHHHHHHCCCeEEEEcCCCHHHH-HHHHHHcC---CCEEEeC-----------CCHHHHHHHHHHHhhcCCEE
Confidence 366777888888764333455555444211 10001111 1111111 11222345777788888999
Q ss_pred EEEcCCchhhHHHHHHcCCcEEEEecCCCCcccccCCCCCCCCCEEECChhHHHHHHH
Q 017785 306 CMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKA 363 (366)
Q Consensus 306 l~VGDs~~~Di~~a~~aG~~tv~V~~G~~~~~~l~~~~~~~~pd~v~~sl~~l~~~~~ 363 (366)
+||||+. ||+.+++++|+ .|..|.+....++. ..+++..+++.++..++.
T Consensus 716 ~~vGDg~-nD~~al~~Agv---gia~g~g~~~a~~~----ad~vl~~~~~~~i~~~i~ 765 (834)
T PRK10671 716 AMVGDGI-NDAPALAQADV---GIAMGGGSDVAIET----AAITLMRHSLMGVADALA 765 (834)
T ss_pred EEEeCCH-HHHHHHHhCCe---eEEecCCCHHHHHh----CCEEEecCCHHHHHHHHH
Confidence 9999997 99999999996 66667666666654 345566688999988775
No 145
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=97.84 E-value=4.1e-05 Score=70.96 Aligned_cols=69 Identities=19% Similarity=0.223 Sum_probs=53.3
Q ss_pred hccCcEEEEecceeEEeCCEe----CCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCCCCcCceecc
Q 017785 80 IDSVETFIFDCDGVIWKGDKL----IDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFAS 151 (366)
Q Consensus 80 ~~~ik~viFDiDGTL~d~~~~----~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~~~~~~i~~~ 151 (366)
+...+.|+||+||||++.+.- -|++.++|++|+++|++++++||+ ++......++.+|+...-+.++.+
T Consensus 125 ~~~~~~i~~D~D~TL~~~~~~v~irdp~V~EtL~eLkekGikLaIvTNg---~Re~v~~~Le~lgL~~yFDvII~~ 197 (303)
T PHA03398 125 WEIPHVIVFDLDSTLITDEEPVRIRDPFVYDSLDELKERGCVLVLWSYG---NREHVVHSLKETKLEGYFDIIICG 197 (303)
T ss_pred eeeccEEEEecCCCccCCCCccccCChhHHHHHHHHHHCCCEEEEEcCC---ChHHHHHHHHHcCCCccccEEEEC
Confidence 356789999999999987654 488999999999999999999973 455566677889986433334433
No 146
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=97.82 E-value=0.00034 Score=71.87 Aligned_cols=57 Identities=23% Similarity=0.350 Sum_probs=42.8
Q ss_pred cCcEEEEecceeEEe----CCEeCCCHHHHHHHHHHCC-CeEEEEeCCCCCCHHHHHHHHHhcCC
Q 017785 82 SVETFIFDCDGVIWK----GDKLIDGVPETLDMLRSKG-KRLVFVTNNSTKSRKQYGKKFETLGL 141 (366)
Q Consensus 82 ~ik~viFDiDGTL~d----~~~~~~~~~~ai~~l~~~g-~~~~~~Tn~sg~~~~~~~~~l~~lG~ 141 (366)
....+.+..||++.- ...+.|++.++|+.|+++| +++.++|| .+.......++++|+
T Consensus 363 g~~~~~v~~~~~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTg---d~~~~a~~i~~~lgi 424 (556)
T TIGR01525 363 GKTVVFVAVDGELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTG---DNRSAAEAVAAELGI 424 (556)
T ss_pred CcEEEEEEECCEEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeC---CCHHHHHHHHHHhCC
Confidence 456788889988764 5788999999999999999 99999996 344443333355544
No 147
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=97.75 E-value=0.00032 Score=71.68 Aligned_cols=61 Identities=13% Similarity=0.163 Sum_probs=45.2
Q ss_pred HHHHcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEecCCCCcccccCCCCCCCCCEEE--CChhHHHHHHH
Q 017785 294 LANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYT--NKISDFLSLKA 363 (366)
Q Consensus 294 a~~~lgv~~~~vl~VGDs~~~Di~~a~~aG~~tv~V~~G~~~~~~l~~~~~~~~pd~v~--~sl~~l~~~~~ 363 (366)
++++++.+.++|+||||+. ||+.+++++| +.|..|....+... ..+|+++ +++.++.+++.
T Consensus 417 ~i~~l~~~~~~v~~vGDg~-nD~~al~~A~---vgia~g~~~~~~~~-----~~ad~vl~~~~l~~l~~~i~ 479 (536)
T TIGR01512 417 IVKELREKYGPVAMVGDGI-NDAPALAAAD---VGIAMGASGSDVAI-----ETADVVLLNDDLSRLPQAIR 479 (536)
T ss_pred HHHHHHhcCCEEEEEeCCH-HHHHHHHhCC---EEEEeCCCccHHHH-----HhCCEEEECCCHHHHHHHHH
Confidence 4444455568999999997 9999999999 57777743222222 2589999 99999988664
No 148
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=97.67 E-value=0.00088 Score=54.15 Aligned_cols=66 Identities=17% Similarity=0.210 Sum_probs=50.0
Q ss_pred HHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEecCCCCcccccCCCCCCCCCEEECChhHHHHHHHh
Q 017785 292 DYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKAA 364 (366)
Q Consensus 292 ~~a~~~lgv~~~~vl~VGDs~~~Di~~a~~aG~~tv~V~~G~~~~~~l~~~~~~~~pd~v~~sl~~l~~~~~~ 364 (366)
..+++.|+-+-+.|+||||.. ||+.|.++|-+..+-+..+.-+...++ .+|+++.++.++++++.-
T Consensus 83 ~~ii~eLkk~~~k~vmVGnGa-ND~laLr~ADlGI~tiq~e~v~~r~l~------~ADvvik~i~e~ldl~~~ 148 (152)
T COG4087 83 AKIIRELKKRYEKVVMVGNGA-NDILALREADLGICTIQQEGVPERLLL------TADVVLKEIAEILDLLKD 148 (152)
T ss_pred HHHHHHhcCCCcEEEEecCCc-chHHHhhhcccceEEeccCCcchHHHh------hchhhhhhHHHHHHHhhc
Confidence 335556665557899999997 999999999877666655444444444 489999999999998753
No 149
>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway.; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process
Probab=97.66 E-value=0.00043 Score=65.69 Aligned_cols=57 Identities=19% Similarity=0.323 Sum_probs=42.2
Q ss_pred cCcEEEEecceeEEe-CCEeCCC--HHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHh
Q 017785 82 SVETFIFDCDGVIWK-GDKLIDG--VPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFET 138 (366)
Q Consensus 82 ~ik~viFDiDGTL~d-~~~~~~~--~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~ 138 (366)
+.|.|-||=|+||++ +..+.+. ++.-|-.|-++|+.+.++|.-+--....+.++|..
T Consensus 146 ~L~LvTFDgDvTLY~DG~sl~~d~pvi~~ii~LL~~gv~VgIVTAAGY~~a~kY~~RL~G 205 (408)
T PF06437_consen 146 GLKLVTFDGDVTLYEDGASLEPDNPVIPRIIKLLRRGVKVGIVTAAGYPGAEKYEERLHG 205 (408)
T ss_pred CceEEEEcCCcccccCCCCCCCCchHHHHHHHHHhcCCeEEEEeCCCCCChHHHHHHHHH
Confidence 789999999999995 6665444 55777788899999999997544444555555543
No 150
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=97.48 E-value=0.0019 Score=69.88 Aligned_cols=68 Identities=15% Similarity=0.116 Sum_probs=47.8
Q ss_pred HHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEecCCCCcccccCCCCCCCCCEEE--CChhHHHHHHHh
Q 017785 288 TFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYT--NKISDFLSLKAA 364 (366)
Q Consensus 288 p~~~~~a~~~lgv~~~~vl~VGDs~~~Di~~a~~aG~~tv~V~~G~~~~~~l~~~~~~~~pd~v~--~sl~~l~~~~~~ 364 (366)
|+--..+.+.+.-..+.|.|+||+. ||+.|+++|+ |+|..|....+... ..||+++ +++..+...+.+
T Consensus 603 P~~K~~iv~~lq~~g~~v~mvGDGv-ND~pAl~~Ad---VGia~g~~g~~va~-----~aaDivl~dd~~~~i~~~i~~ 672 (884)
T TIGR01522 603 PEHKMKIVKALQKRGDVVAMTGDGV-NDAPALKLAD---IGVAMGQTGTDVAK-----EAADMILTDDDFATILSAIEE 672 (884)
T ss_pred HHHHHHHHHHHHHCCCEEEEECCCc-ccHHHHHhCC---eeEecCCCcCHHHH-----HhcCEEEcCCCHHHHHHHHHH
Confidence 3333444444444457899999998 9999999999 66766754333322 3589999 779999887653
No 151
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=97.47 E-value=0.00086 Score=57.93 Aligned_cols=32 Identities=25% Similarity=0.255 Sum_probs=25.2
Q ss_pred cHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHH
Q 017785 287 STFMMDYLANKFGIQKSQICMVGDRLDTDILFGQN 321 (366)
Q Consensus 287 ~p~~~~~a~~~lgv~~~~vl~VGDs~~~Di~~a~~ 321 (366)
++++...+.+ |+.-+.++||||.- ||++|-.-
T Consensus 160 Ka~~i~~lrk--~~~~~~~~mvGDGa-tDlea~~p 191 (227)
T KOG1615|consen 160 KAEVIALLRK--NYNYKTIVMVGDGA-TDLEAMPP 191 (227)
T ss_pred cHHHHHHHHh--CCChheeEEecCCc-cccccCCc
Confidence 3566666666 77788999999997 99988655
No 152
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=97.42 E-value=0.00023 Score=61.04 Aligned_cols=36 Identities=6% Similarity=-0.014 Sum_probs=31.0
Q ss_pred HHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCcEE
Q 017785 291 MDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTL 327 (366)
Q Consensus 291 ~~~a~~~lgv~~~~vl~VGDs~~~Di~~a~~aG~~tv 327 (366)
|.+.++.+|.++++|++|||++ .|+.++.++|+...
T Consensus 101 ~~K~L~~l~~~~~~vIiVDD~~-~~~~~~~~NgI~i~ 136 (162)
T TIGR02251 101 YVKDLSLVGKDLSKVIIIDNSP-YSYSLQPDNAIPIK 136 (162)
T ss_pred EEeEchhcCCChhhEEEEeCCh-hhhccCccCEeecC
Confidence 4556788899999999999998 99999999996654
No 153
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=97.38 E-value=0.00033 Score=66.94 Aligned_cols=45 Identities=13% Similarity=0.305 Sum_probs=39.7
Q ss_pred HHHHHHHcCCCCCcEEEEcCCchhhHHHHH-HcCCcEEEEecCCCC
Q 017785 291 MDYLANKFGIQKSQICMVGDRLDTDILFGQ-NGGCKTLLVLSGVTS 335 (366)
Q Consensus 291 ~~~a~~~lgv~~~~vl~VGDs~~~Di~~a~-~aG~~tv~V~~G~~~ 335 (366)
...+.+.+|++.++|++|||++.+||.+++ .+||+|++|......
T Consensus 283 ~~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~Gw~TvlI~pEL~~ 328 (343)
T TIGR02244 283 LKQFHELLKWRGKEVLYFGDHIYGDLLRSKKKRGWRTAAIIPELEQ 328 (343)
T ss_pred HHHHHHHHCCCCCcEEEECCcchHHHHhhHHhcCcEEEEEchhHHH
Confidence 456788899999999999999999999998 999999999775543
No 154
>KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=97.20 E-value=0.00099 Score=55.20 Aligned_cols=72 Identities=24% Similarity=0.226 Sum_probs=50.9
Q ss_pred CccceeeeeeecCcccccCCCcH----HHHHHHHHHcC-CCCCcEEEEcCCchhhHHHHHHcCCcEEEEecCCCCcc
Q 017785 266 GSMVGAFVGSTQREPLVVGKPST----FMMDYLANKFG-IQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLS 337 (366)
Q Consensus 266 ~~~~~~~~~~~~~e~~~~gKP~p----~~~~~a~~~lg-v~~~~vl~VGDs~~~Di~~a~~aG~~tv~V~~G~~~~~ 337 (366)
++.+..++.-.|.....+.+-+| +.+.+....-. .++++++||||++-+||-+|+..|..+||+..|+...+
T Consensus 98 ~s~Ak~le~k~gIpVlRHs~kKP~ct~E~~~y~~~Nshv~~~se~~~vGDRlfTDI~~aN~mGs~gVw~~~gv~~~~ 174 (190)
T KOG2961|consen 98 DSKAKALEAKIGIPVLRHSVKKPACTAEEVEYHFGNSHVCTSSELIMVGDRLFTDIVYANRMGSLGVWTEPGVRAEE 174 (190)
T ss_pred hHHHHHHHHhhCCceEeecccCCCccHHHHHHHhCCcccCChhHeEEEccchhhhHhhhhhccceeEEecccccccc
Confidence 34455666666666544444333 44444332222 57999999999999999999999999999999987543
No 155
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=97.18 E-value=0.00062 Score=61.74 Aligned_cols=63 Identities=24% Similarity=0.424 Sum_probs=54.1
Q ss_pred ccCcEEEEecceeEEeC---------------------------CEeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHH
Q 017785 81 DSVETFIFDCDGVIWKG---------------------------DKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYG 133 (366)
Q Consensus 81 ~~ik~viFDiDGTL~d~---------------------------~~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~ 133 (366)
++..+|+||||+|++++ ...+|++.+.++.++++|..++|+||.....+....
T Consensus 70 ~~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~~~~~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~ 149 (229)
T PF03767_consen 70 DKPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVASGKAPAIPGALELYNYARSRGVKVFFITGRPESQREATE 149 (229)
T ss_dssp TSEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHHCTGGEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHH
T ss_pred CCCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHhcccCcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHH
Confidence 46779999999999873 256899999999999999999999998777788888
Q ss_pred HHHHhcCCCC
Q 017785 134 KKFETLGLTV 143 (366)
Q Consensus 134 ~~l~~lG~~~ 143 (366)
+.|...|++.
T Consensus 150 ~nL~~~G~~~ 159 (229)
T PF03767_consen 150 KNLKKAGFPG 159 (229)
T ss_dssp HHHHHHTTST
T ss_pred HHHHHcCCCc
Confidence 8888888754
No 156
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=97.04 E-value=0.0011 Score=59.84 Aligned_cols=63 Identities=14% Similarity=0.230 Sum_probs=49.3
Q ss_pred ccCcEEEEecceeEEeCC---------------------------EeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHH
Q 017785 81 DSVETFIFDCDGVIWKGD---------------------------KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYG 133 (366)
Q Consensus 81 ~~ik~viFDiDGTL~d~~---------------------------~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~ 133 (366)
++..+|+||+|-|++++. ..+|++.++++.++++|+.++++|+.+...+....
T Consensus 75 dg~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~ 154 (229)
T TIGR01675 75 DGMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATL 154 (229)
T ss_pred CCCcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHH
Confidence 467799999999999831 33677888999999999999999965444455577
Q ss_pred HHHHhcCCCC
Q 017785 134 KKFETLGLTV 143 (366)
Q Consensus 134 ~~l~~lG~~~ 143 (366)
+.|...|++.
T Consensus 155 ~nL~~~G~~~ 164 (229)
T TIGR01675 155 DNLINAGFTG 164 (229)
T ss_pred HHHHHcCCCC
Confidence 7788888764
No 157
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=96.99 E-value=0.0019 Score=57.85 Aligned_cols=34 Identities=15% Similarity=-0.070 Sum_probs=26.8
Q ss_pred HHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCcEE
Q 017785 293 YLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTL 327 (366)
Q Consensus 293 ~a~~~lgv~~~~vl~VGDs~~~Di~~a~~aG~~tv 327 (366)
.+.+.++.+.+.+++-||+. +|+.|...+|-..+
T Consensus 166 rl~~~~~~~~~~~~aYsDS~-~D~pmL~~a~~~~~ 199 (210)
T TIGR01545 166 QLEQKIGSPLKLYSGYSDSK-QDNPLLAFCEHRWR 199 (210)
T ss_pred HHHHHhCCChhheEEecCCc-ccHHHHHhCCCcEE
Confidence 34445566777899999997 99999999996544
No 158
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=96.97 E-value=0.0019 Score=56.94 Aligned_cols=60 Identities=17% Similarity=0.173 Sum_probs=49.5
Q ss_pred ccCcEEEEecceeEEeCCEeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCCC
Q 017785 81 DSVETFIFDCDGVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTV 143 (366)
Q Consensus 81 ~~ik~viFDiDGTL~d~~~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~~ 143 (366)
..+..|+.|+||||++-.--+..+...+..+++.|+++++|| .+++.++....+++|++-
T Consensus 5 ~~~~lIFtDlD~TLl~~~ye~~pA~pv~~el~d~G~~Vi~~S---SKT~aE~~~l~~~l~v~~ 64 (274)
T COG3769 5 QMPLLIFTDLDGTLLPHSYEWQPAAPVLLELKDAGVPVILCS---SKTRAEMLYLQKSLGVQG 64 (274)
T ss_pred ccceEEEEcccCcccCCCCCCCccchHHHHHHHcCCeEEEec---cchHHHHHHHHHhcCCCC
Confidence 346789999999999922235558889999999999999999 678888888888999873
No 159
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=96.92 E-value=0.023 Score=52.52 Aligned_cols=57 Identities=18% Similarity=0.226 Sum_probs=41.3
Q ss_pred cCcEEEEecceeEEeC------CEeCCCHHHHHHHHHHCCC-eEEEEeCCCCCCHHHHHHHHHhcCC
Q 017785 82 SVETFIFDCDGVIWKG------DKLIDGVPETLDMLRSKGK-RLVFVTNNSTKSRKQYGKKFETLGL 141 (366)
Q Consensus 82 ~ik~viFDiDGTL~d~------~~~~~~~~~ai~~l~~~g~-~~~~~Tn~sg~~~~~~~~~l~~lG~ 141 (366)
+-++++||+||||.+. ..+.++..+.|+.|.++.- .+.++| ||+..++.+.+.-.|+
T Consensus 17 ~~~~~~lDyDGTl~~i~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiS---GR~~~~l~~~~~v~~i 80 (266)
T COG1877 17 RKRLLFLDYDGTLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAIIS---GRSLAELERLFGVPGI 80 (266)
T ss_pred cceEEEEeccccccccccCccccCCCHHHHHHHHHHHhcCCCeEEEEe---CCCHHHHHHhcCCCCc
Confidence 4569999999999873 2234446788888887754 566777 8999998877654444
No 160
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=96.81 E-value=0.012 Score=62.61 Aligned_cols=57 Identities=14% Similarity=0.185 Sum_probs=42.0
Q ss_pred cCcEEEEecceeEEe----CCEeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCC
Q 017785 82 SVETFIFDCDGVIWK----GDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGL 141 (366)
Q Consensus 82 ~ik~viFDiDGTL~d----~~~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~ 141 (366)
....+.+=.||+++- .+.+.+++.++|+.|++.|+++.++|+ .+........+++|+
T Consensus 547 g~~~v~va~~~~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~llTG---d~~~~a~~ia~~lgi 607 (741)
T PRK11033 547 GKTVVLVLRNDDVLGLIALQDTLRADARQAISELKALGIKGVMLTG---DNPRAAAAIAGELGI 607 (741)
T ss_pred CCEEEEEEECCEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEEcC---CCHHHHHHHHHHcCC
Confidence 355677777777653 788899999999999999999999995 344444444455555
No 161
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=96.79 E-value=0.024 Score=61.83 Aligned_cols=62 Identities=13% Similarity=0.090 Sum_probs=44.1
Q ss_pred HHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEecCCCCcccccCCCCCCCCCEEECC--hhHHHHHHH
Q 017785 292 DYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNK--ISDFLSLKA 363 (366)
Q Consensus 292 ~~a~~~lgv~~~~vl~VGDs~~~Di~~a~~aG~~tv~V~~G~~~~~~l~~~~~~~~pd~v~~s--l~~l~~~~~ 363 (366)
..+.+.++-..+.|.|+||+. ||+.|.+.|++ +|..|.+..... ..+|+++.+ +..+.+++.
T Consensus 620 ~~iV~~lq~~g~~va~iGDG~-ND~~alk~AdV---Gia~g~g~~~ak------~aAD~vl~dd~f~~i~~~i~ 683 (917)
T TIGR01116 620 SELVELLQEQGEIVAMTGDGV-NDAPALKKADI---GIAMGSGTEVAK------EASDMVLADDNFATIVAAVE 683 (917)
T ss_pred HHHHHHHHhcCCeEEEecCCc-chHHHHHhCCe---eEECCCCcHHHH------HhcCeEEccCCHHHHHHHHH
Confidence 334455555567889999998 99999999995 555553333332 259999977 888887664
No 162
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=96.72 E-value=0.08 Score=48.06 Aligned_cols=76 Identities=11% Similarity=0.113 Sum_probs=48.1
Q ss_pred HHHHHHHHHH---cCCCCCcEEEEcCCchhhHHHHHHcCC-cEEEEecCCCCcccccCCCCCCC-CCEEECChhHHHHHH
Q 017785 288 TFMMDYLANK---FGIQKSQICMVGDRLDTDILFGQNGGC-KTLLVLSGVTSLSMLQSPNNSIQ-PDFYTNKISDFLSLK 362 (366)
Q Consensus 288 p~~~~~a~~~---lgv~~~~vl~VGDs~~~Di~~a~~aG~-~tv~V~~G~~~~~~l~~~~~~~~-pd~v~~sl~~l~~~~ 362 (366)
..+.+..++. -|+.-+++++|||.- ||+-.+.+.+- +.++.+.|..=...+.+.+.... .-....+=.|+++.+
T Consensus 152 ~~il~~~~~~~~~~g~~~~rviYiGDG~-nD~Cp~~~L~~~D~v~~R~~~~l~~~i~~~~~~~~a~v~~W~~g~~i~~~l 230 (234)
T PF06888_consen 152 GKILERLLQEQAQRGVPYDRVIYIGDGR-NDFCPALRLRPRDVVFPRKGYPLHKLIQKNPGEVKAEVVPWSSGEEILEIL 230 (234)
T ss_pred HHHHHHHHHHHhhcCCCcceEEEECCCC-CCcCcccccCCCCEEecCCCChHHHHHhcCCCcceeEEEecCCHHHHHHHH
Confidence 3455555554 367789999999997 99999998775 46777777543333332111122 233456777777766
Q ss_pred Hh
Q 017785 363 AA 364 (366)
Q Consensus 363 ~~ 364 (366)
..
T Consensus 231 ~~ 232 (234)
T PF06888_consen 231 LQ 232 (234)
T ss_pred Hh
Confidence 54
No 163
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=96.67 E-value=0.13 Score=55.24 Aligned_cols=56 Identities=20% Similarity=0.262 Sum_probs=41.6
Q ss_pred CcEEEEecceeEEeCC---------EeCCCHHHHHHHHHHC-CCeEEEEeCCCCCCHHHHHHHHHhcCC
Q 017785 83 VETFIFDCDGVIWKGD---------KLIDGVPETLDMLRSK-GKRLVFVTNNSTKSRKQYGKKFETLGL 141 (366)
Q Consensus 83 ik~viFDiDGTL~d~~---------~~~~~~~~ai~~l~~~-g~~~~~~Tn~sg~~~~~~~~~l~~lG~ 141 (366)
-.+++||+||||..-. .+.++..+.|+.|.+. +..++++| ||+...+.+.+...++
T Consensus 507 ~rll~LDyDGTL~~~~~~~~~p~~a~p~~~l~~~L~~L~~d~~~~V~IvS---GR~~~~L~~~~~~~~l 572 (797)
T PLN03063 507 NRLLILGFYGTLTEPRNSQIKEMDLGLHPELKETLKALCSDPKTTVVVLS---RSGKDILDKNFGEYNI 572 (797)
T ss_pred CeEEEEecCccccCCCCCccccccCCCCHHHHHHHHHHHcCCCCEEEEEe---CCCHHHHHHHhCCCCC
Confidence 3589999999998531 1344567888888765 56788888 8999999988865444
No 164
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=96.67 E-value=0.0025 Score=53.97 Aligned_cols=39 Identities=26% Similarity=0.415 Sum_probs=34.4
Q ss_pred EEEEecceeEEeCC------------EeCCCHHHHHHHHHHCCCeEEEEeC
Q 017785 85 TFIFDCDGVIWKGD------------KLIDGVPETLDMLRSKGKRLVFVTN 123 (366)
Q Consensus 85 ~viFDiDGTL~d~~------------~~~~~~~~ai~~l~~~g~~~~~~Tn 123 (366)
.|++|+||||..|+ ...+++.+..+++.++|..+.++|.
T Consensus 1 VVvsDIDGTiT~SD~~G~i~~~~G~d~~h~g~~~l~~~i~~~GY~ilYlTa 51 (157)
T PF08235_consen 1 VVVSDIDGTITKSDVLGHILPILGKDWTHPGAAELYRKIADNGYKILYLTA 51 (157)
T ss_pred CEEEeccCCcCccchhhhhhhccCchhhhhcHHHHHHHHHHCCeEEEEECc
Confidence 38999999999874 4578899999999999999999994
No 165
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=96.60 E-value=0.0046 Score=56.91 Aligned_cols=62 Identities=16% Similarity=0.327 Sum_probs=48.4
Q ss_pred cCcEEEEecceeEEeC----------------------------CEeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHH
Q 017785 82 SVETFIFDCDGVIWKG----------------------------DKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYG 133 (366)
Q Consensus 82 ~ik~viFDiDGTL~d~----------------------------~~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~ 133 (366)
.-.+|+||+|+|++++ ...+|++.+..+.++++|+.++++||.....+....
T Consensus 100 ~~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~~~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~ 179 (275)
T TIGR01680 100 EKDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTE 179 (275)
T ss_pred CCCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHhcccCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHH
Confidence 4589999999999951 122566778889999999999999986665566677
Q ss_pred HHHHhcCCCC
Q 017785 134 KKFETLGLTV 143 (366)
Q Consensus 134 ~~l~~lG~~~ 143 (366)
+.|.+.|++.
T Consensus 180 ~NL~kaGy~~ 189 (275)
T TIGR01680 180 ANLKKAGYHT 189 (275)
T ss_pred HHHHHcCCCC
Confidence 7777888864
No 166
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=96.58 E-value=0.011 Score=53.64 Aligned_cols=64 Identities=13% Similarity=-0.028 Sum_probs=30.8
Q ss_pred CCCcHHHHHHHHHHcCCC---CCcEEEEcCCchhhHHHHHHcCCc-----EEEEecCCCCcccccCCCCCCCCCEEECCh
Q 017785 284 GKPSTFMMDYLANKFGIQ---KSQICMVGDRLDTDILFGQNGGCK-----TLLVLSGVTSLSMLQSPNNSIQPDFYTNKI 355 (366)
Q Consensus 284 gKP~p~~~~~a~~~lgv~---~~~vl~VGDs~~~Di~~a~~aG~~-----tv~V~~G~~~~~~l~~~~~~~~pd~v~~sl 355 (366)
+..+..+...+++.++.. +.-++++||.. +|-.|-+.+.-. ++.|.++... ... -.+.|.+++.
T Consensus 163 ~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~-tDE~~f~~~~~~~~~~~~i~V~~~~~~--~~~-----t~A~y~l~~p 234 (235)
T PF02358_consen 163 GVNKGSAVRRLLEELPFAGPKPDFVLYIGDDR-TDEDAFRALRELEEGGFGIKVGSVSVG--EKP-----TAASYRLDDP 234 (235)
T ss_dssp T--HHHHHHHHHTTS---------EEEEESSH-HHHHHHHTTTTS----EEEEES-------------------------
T ss_pred CCChHHHHHHHHHhcCccccccceeEEecCCC-CCHHHHHHHHhcccCCCCeEEEeeccc--ccc-----cccccccccC
Confidence 344678888899988876 78999999997 999999886654 5555554321 111 2467776653
No 167
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=96.51 E-value=0.061 Score=46.35 Aligned_cols=67 Identities=12% Similarity=0.081 Sum_probs=38.8
Q ss_pred cCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEecCCCCcccccCCCCCCCCCEEECChhHHHHH
Q 017785 283 VGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSL 361 (366)
Q Consensus 283 ~gKP~p~~~~~a~~~lgv~~~~vl~VGDs~~~Di~~a~~aG~~tv~V~~G~~~~~~l~~~~~~~~pd~v~~sl~~l~~~ 361 (366)
+|-.++...... .-.++.+++.||+. .|+.+|+..-+-.. +...+.-++++-.+..-.+++.|++.-
T Consensus 144 fG~dK~~vI~~l----~e~~e~~fy~GDsv-sDlsaaklsDllFA-------K~~L~nyc~eqn~~f~~fe~F~eIlk~ 210 (220)
T COG4359 144 FGHDKSSVIHEL----SEPNESIFYCGDSV-SDLSAAKLSDLLFA-------KDDLLNYCREQNLNFLEFETFYEILKE 210 (220)
T ss_pred cCCCcchhHHHh----hcCCceEEEecCCc-ccccHhhhhhhHhh-------HHHHHHHHHHcCCCCcccccHHHHHHH
Confidence 344444444444 44667899999998 99999987763221 111111122224566666777776543
No 168
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=95.49 E-value=0.14 Score=55.71 Aligned_cols=48 Identities=25% Similarity=0.370 Sum_probs=36.0
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEE-EcCCchh-hHHHHHHcCCcEEEEecCC
Q 017785 284 GKPSTFMMDYLANKFGIQKSQICM-VGDRLDT-DILFGQNGGCKTLLVLSGV 333 (366)
Q Consensus 284 gKP~p~~~~~a~~~lgv~~~~vl~-VGDs~~~-Di~~a~~aG~~tv~V~~G~ 333 (366)
.--+..+.+++..++|++++++++ +||+- + |.++. -.|.+.-.|.-|+
T Consensus 954 ~ASKgqAlRyL~~rwgi~l~~v~VfaGdSG-ntD~e~L-l~G~~~tvi~~g~ 1003 (1050)
T TIGR02468 954 LASRSQALRYLFVRWGIELANMAVFVGESG-DTDYEGL-LGGLHKTVILKGV 1003 (1050)
T ss_pred CCCHHHHHHHHHHHcCCChHHeEEEeccCC-CCCHHHH-hCCceeEEEEecc
Confidence 334478899999999999999955 99998 6 98776 4456555555554
No 169
>COG4996 Predicted phosphatase [General function prediction only]
Probab=95.36 E-value=0.26 Score=40.11 Aligned_cols=55 Identities=29% Similarity=0.442 Sum_probs=40.9
Q ss_pred cEEEEecceeEEeCC-------------------------EeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHh
Q 017785 84 ETFIFDCDGVIWKGD-------------------------KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFET 138 (366)
Q Consensus 84 k~viFDiDGTL~d~~-------------------------~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~ 138 (366)
.+|.||.||||||-+ ++.+.+.+.++.++..|.-+..+|-| -.....+.|+.
T Consensus 1 ~~i~~d~d~t~wdhh~iSsl~pPf~rVs~n~i~Ds~G~ev~L~~~v~~~l~warnsG~i~~~~sWN---~~~kA~~aLra 77 (164)
T COG4996 1 RAIVFDADKTLWDHHNISSLEPPFRRVSSNTIEDSKGREVHLFPDVKETLKWARNSGYILGLASWN---FEDKAIKALRA 77 (164)
T ss_pred CcEEEeCCCcccccccchhcCCcceecCccceecCCCeEEEEcHHHHHHHHHHHhCCcEEEEeecC---chHHHHHHHHH
Confidence 378999999999942 45777889999999999888888854 34444445566
Q ss_pred cCC
Q 017785 139 LGL 141 (366)
Q Consensus 139 lG~ 141 (366)
+++
T Consensus 78 l~~ 80 (164)
T COG4996 78 LDL 80 (164)
T ss_pred hch
Confidence 665
No 170
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=95.28 E-value=0.31 Score=44.87 Aligned_cols=49 Identities=12% Similarity=0.189 Sum_probs=39.4
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHH----HHHcCCcEEEEecCC
Q 017785 284 GKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILF----GQNGGCKTLLVLSGV 333 (366)
Q Consensus 284 gKP~p~~~~~a~~~lgv~~~~vl~VGDs~~~Di~~----a~~aG~~tv~V~~G~ 333 (366)
|-++..++..+++++|..|+.+|+|.|+. ..+.. ++..|+...++.+..
T Consensus 160 ~~~KG~~L~~fL~~~~~~pk~IIfIDD~~-~nl~sv~~a~k~~~I~f~G~~Yt~ 212 (252)
T PF11019_consen 160 GQDKGEVLKYFLDKINQSPKKIIFIDDNK-ENLKSVEKACKKSGIDFIGFHYTG 212 (252)
T ss_pred CCccHHHHHHHHHHcCCCCCeEEEEeCCH-HHHHHHHHHHhhCCCcEEEEEEcc
Confidence 45567899999999999999999999997 55653 456788888876643
No 171
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=94.97 E-value=0.048 Score=48.97 Aligned_cols=63 Identities=17% Similarity=0.395 Sum_probs=50.8
Q ss_pred cCcEEEEecceeEEeCC---------------------------EeCCCHHHHHHHHHHCCCeEEEEeCCCCCC-HHHHH
Q 017785 82 SVETFIFDCDGVIWKGD---------------------------KLIDGVPETLDMLRSKGKRLVFVTNNSTKS-RKQYG 133 (366)
Q Consensus 82 ~ik~viFDiDGTL~d~~---------------------------~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~-~~~~~ 133 (366)
+-++|+.|+|-|++|.. +.+|++.+.++...++|..++++||..... .....
T Consensus 78 K~~aVvlDlDETvLdNs~Yqgy~v~nnk~f~pe~Wd~wV~a~~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~ 157 (274)
T COG2503 78 KKKAVVLDLDETVLDNSAYQGYQVLNNKGFTPETWDKWVQAKKSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTI 157 (274)
T ss_pred CCceEEEecchHhhcCccccchhhhcCCCCCccchHHHHhhcccccCccHHHHHHHHHhcCcEEEEEeccchhcccchhH
Confidence 45599999999999841 568999999999999999999999965555 44566
Q ss_pred HHHHhcCCCCC
Q 017785 134 KKFETLGLTVT 144 (366)
Q Consensus 134 ~~l~~lG~~~~ 144 (366)
+-|.+.|++..
T Consensus 158 ~nLk~~g~~~~ 168 (274)
T COG2503 158 ENLKSEGLPQV 168 (274)
T ss_pred HHHHHcCcccc
Confidence 67788888643
No 172
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=94.74 E-value=0.46 Score=50.05 Aligned_cols=54 Identities=22% Similarity=0.386 Sum_probs=41.2
Q ss_pred EEEEecceeEEe----CCEeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCC
Q 017785 85 TFIFDCDGVIWK----GDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGL 141 (366)
Q Consensus 85 ~viFDiDGTL~d----~~~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~ 141 (366)
.+++-.||.+.- .+.+-+++.++|++|++.|++...+|. -++......-+++|+
T Consensus 519 ~v~va~dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLTG---Dn~~~A~~iA~~lGI 576 (713)
T COG2217 519 VVFVAVDGKLVGVIALADELRPDAKEAIAALKALGIKVVMLTG---DNRRTAEAIAKELGI 576 (713)
T ss_pred EEEEEECCEEEEEEEEeCCCChhHHHHHHHHHHCCCeEEEEcC---CCHHHHHHHHHHcCh
Confidence 689999996653 788999999999999999999999995 333333323366666
No 173
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=94.69 E-value=0.46 Score=52.42 Aligned_cols=44 Identities=20% Similarity=0.246 Sum_probs=37.7
Q ss_pred CCEeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCCC
Q 017785 97 GDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTV 143 (366)
Q Consensus 97 ~~~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~~ 143 (366)
.+.+-+++.++|+++++.|+.+.++| |++........+++|+-.
T Consensus 566 ~Dplr~~v~~aI~~l~~~Gi~v~~~T---Gd~~~ta~~ia~~~gi~~ 609 (997)
T TIGR01106 566 IDPPRAAVPDAVGKCRSAGIKVIMVT---GDHPITAKAIAKGVGIIS 609 (997)
T ss_pred cCCChHHHHHHHHHHHHCCCeEEEEC---CCCHHHHHHHHHHcCCCC
Confidence 45678889999999999999999999 788888777778998843
No 174
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=93.96 E-value=0.79 Score=41.00 Aligned_cols=42 Identities=29% Similarity=0.429 Sum_probs=33.1
Q ss_pred CCEeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH-HhcCCCC
Q 017785 97 GDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKF-ETLGLTV 143 (366)
Q Consensus 97 ~~~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l-~~lG~~~ 143 (366)
+.++.|++.++++.+++.=-++++-| +..++...+ ..+|++.
T Consensus 81 sa~lvPgA~etm~~l~~~~tp~v~ST-----SY~qy~~r~a~~ig~Pr 123 (315)
T COG4030 81 SAKLVPGAEETMATLQERWTPVVIST-----SYTQYLRRTASMIGVPR 123 (315)
T ss_pred hcccCCChHHHHHHHhccCCceEEec-----cHHHHHHHHHHhcCCCc
Confidence 45789999999999998877887777 788888777 5567743
No 175
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=93.66 E-value=0.93 Score=49.46 Aligned_cols=43 Identities=21% Similarity=0.240 Sum_probs=34.0
Q ss_pred CCEeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCC
Q 017785 97 GDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT 142 (366)
Q Consensus 97 ~~~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~ 142 (366)
.+.+-|++.++|+.+++.|+++..+|+ -+.......-+++|+.
T Consensus 548 ~Dp~R~~a~~aI~~l~~aGI~v~miTG---D~~~tA~~IA~~lGI~ 590 (902)
T PRK10517 548 LDPPKETTAPALKALKASGVTVKILTG---DSELVAAKVCHEVGLD 590 (902)
T ss_pred hCcchhhHHHHHHHHHHCCCEEEEEcC---CCHHHHHHHHHHcCCC
Confidence 567788999999999999999999994 4444444444888884
No 176
>COG5663 Uncharacterized conserved protein [Function unknown]
Probab=93.57 E-value=0.17 Score=42.92 Aligned_cols=39 Identities=18% Similarity=0.191 Sum_probs=32.4
Q ss_pred HHHHcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEecCCCCc
Q 017785 294 LANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSL 336 (366)
Q Consensus 294 a~~~lgv~~~~vl~VGDs~~~Di~~a~~aG~~tv~V~~G~~~~ 336 (366)
+.+.++++ ++|+|+.+|-.+.|+++|++.+++.+-.++.
T Consensus 129 ~vrth~id----lf~ed~~~na~~iAk~~~~~vilins~ynRk 167 (194)
T COG5663 129 AVRTHNID----LFFEDSHDNAGQIAKNAGIPVILINSPYNRK 167 (194)
T ss_pred hhHhhccC----ccccccCchHHHHHHhcCCcEEEecCccccc
Confidence 45556665 7899999999999999999999999877654
No 177
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=93.52 E-value=1.6 Score=48.37 Aligned_cols=43 Identities=9% Similarity=0.075 Sum_probs=33.7
Q ss_pred CCEeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCC
Q 017785 97 GDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT 142 (366)
Q Consensus 97 ~~~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~ 142 (366)
.+.+-+++.++|+.+++.|+++..+| |-........-+++|+.
T Consensus 644 ~Dp~r~~v~~aI~~l~~aGIkv~MiT---GD~~~tA~~iA~~~Gi~ 686 (1053)
T TIGR01523 644 YDPPRNESAGAVEKCHQAGINVHMLT---GDFPETAKAIAQEVGII 686 (1053)
T ss_pred ecCCchhHHHHHHHHHHCCCEEEEEC---CCCHHHHHHHHHHcCCC
Confidence 45678889999999999999999999 44555544445788884
No 178
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=93.43 E-value=0.072 Score=46.16 Aligned_cols=21 Identities=19% Similarity=0.463 Sum_probs=19.3
Q ss_pred CCCCCcEEEEcCCchhhHHHHH
Q 017785 299 GIQKSQICMVGDRLDTDILFGQ 320 (366)
Q Consensus 299 gv~~~~vl~VGDs~~~Di~~a~ 320 (366)
+...+++++|||+. +|+.|++
T Consensus 172 ~~~~~~~~~iGDs~-~D~~~lr 192 (192)
T PF12710_consen 172 DIDPDRVIAIGDSI-NDLPMLR 192 (192)
T ss_dssp THTCCEEEEEESSG-GGHHHHH
T ss_pred CCCCCeEEEEECCH-HHHHHhC
Confidence 78899999999998 9999986
No 179
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=93.40 E-value=1.6 Score=45.98 Aligned_cols=52 Identities=10% Similarity=0.130 Sum_probs=39.3
Q ss_pred CcEEEEcCCchhhHHHHHHcCCcEEEEecCCCCcccccCCCCCCCCCEEE--CChhHHHHHHHh
Q 017785 303 SQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYT--NKISDFLSLKAA 364 (366)
Q Consensus 303 ~~vl~VGDs~~~Di~~a~~aG~~tv~V~~G~~~~~~l~~~~~~~~pd~v~--~sl~~l~~~~~~ 364 (366)
+-+.|+||.. ||-.+.++|. |+|..|.+..-..+ .+|.++ +|+..+.+.+++
T Consensus 504 ~~VaMtGDGv-NDAPALa~AD---VGIAMgsGTdvAke------AADiVLldd~ls~Iv~av~~ 557 (673)
T PRK14010 504 HIVAMTGDGT-NDAPALAEAN---VGLAMNSGTMSAKE------AANLIDLDSNPTKLMEVVLI 557 (673)
T ss_pred CEEEEECCCh-hhHHHHHhCC---EEEEeCCCCHHHHH------hCCEEEcCCCHHHHHHHHHH
Confidence 4689999998 9999999998 66666644444444 488888 678888776643
No 180
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=93.27 E-value=1.7 Score=47.31 Aligned_cols=48 Identities=15% Similarity=0.188 Sum_probs=35.8
Q ss_pred eeEEeCCEeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCC
Q 017785 92 GVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT 142 (366)
Q Consensus 92 GTL~d~~~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~ 142 (366)
|.+.=.+.+-+++.++++.+++.|+++..+|+ -+.......-+++|+.
T Consensus 508 Gli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTG---D~~~tA~aIA~~lGI~ 555 (867)
T TIGR01524 508 GFLGFLDPPKESTKEAIAALFKNGINVKVLTG---DNEIVTARICQEVGID 555 (867)
T ss_pred EEEEeeCCCchhHHHHHHHHHHCCCEEEEEcC---CCHHHHHHHHHHcCCC
Confidence 44444677888999999999999999999994 3444444344788884
No 181
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=93.24 E-value=1.5 Score=47.82 Aligned_cols=48 Identities=19% Similarity=0.215 Sum_probs=35.7
Q ss_pred eeEEeCCEeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCC
Q 017785 92 GVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT 142 (366)
Q Consensus 92 GTL~d~~~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~ 142 (366)
|.+.=.+.+-+++.++|+.+++.|+++..+|+ -+.......-+++|+.
T Consensus 543 Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTG---D~~~tA~aIA~~lGI~ 590 (903)
T PRK15122 543 GFLTFLDPPKESAAPAIAALRENGVAVKVLTG---DNPIVTAKICREVGLE 590 (903)
T ss_pred EEEeccCccHHHHHHHHHHHHHCCCeEEEECC---CCHHHHHHHHHHcCCC
Confidence 33334677888999999999999999999995 3444444444788884
No 182
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=93.21 E-value=1.9 Score=47.44 Aligned_cols=50 Identities=22% Similarity=0.222 Sum_probs=37.0
Q ss_pred eeEEeCCEeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCCCC
Q 017785 92 GVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVT 144 (366)
Q Consensus 92 GTL~d~~~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~~~ 144 (366)
|.+.=.+.+-+++.++++.+++.|+++..+|+ -+.......-+++|+...
T Consensus 572 Gli~~~Dplr~~~~~aI~~l~~aGI~v~miTG---D~~~tA~~iA~~~GI~~~ 621 (941)
T TIGR01517 572 GVVGIKDPLRPGVREAVQECQRAGITVRMVTG---DNIDTAKAIARNCGILTF 621 (941)
T ss_pred EEeeccCCCchhHHHHHHHHHHCCCEEEEECC---CChHHHHHHHHHcCCCCC
Confidence 44444678889999999999999999999994 444444444477888543
No 183
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=93.15 E-value=0.048 Score=46.20 Aligned_cols=39 Identities=31% Similarity=0.451 Sum_probs=27.9
Q ss_pred cEEEEecceeEEeCCE--------------------eCCCHHHHHHHHHHCCCeEEEEeC
Q 017785 84 ETFIFDCDGVIWKGDK--------------------LIDGVPETLDMLRSKGKRLVFVTN 123 (366)
Q Consensus 84 k~viFDiDGTL~d~~~--------------------~~~~~~~ai~~l~~~g~~~~~~Tn 123 (366)
|+++||+||||+.+.. .-|++.+.++.+. +...+++.|.
T Consensus 1 k~LVlDLD~TLv~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~~FL~~l~-~~~ev~i~T~ 59 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPLPYDFKIIDQRGGYYVKLRPGLDEFLEELS-KHYEVVIWTS 59 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCTT-SEEEETEEEEEEEEE-TTHHHHHHHHH-HHCEEEEE-S
T ss_pred CEEEEeCCCcEEEEeecCCCCcccceeccccceeEeeCchHHHHHHHHH-HhceEEEEEe
Confidence 5799999999997321 4688889998884 4488888885
No 184
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=93.12 E-value=1.4 Score=46.40 Aligned_cols=57 Identities=19% Similarity=0.284 Sum_probs=40.3
Q ss_pred cCcEEEEecceeEE----eCCEeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCC
Q 017785 82 SVETFIFDCDGVIW----KGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGL 141 (366)
Q Consensus 82 ~ik~viFDiDGTL~----d~~~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~ 141 (366)
..+.+.+-.|++++ -.+.+-|++.++++.+++.|+++.++|. -........-+++|+
T Consensus 425 G~r~l~va~~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTG---D~~~ta~~iA~~lGI 485 (675)
T TIGR01497 425 GGTPLVVCEDNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITG---DNRLTAAAIAAEAGV 485 (675)
T ss_pred CCeEEEEEECCEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcC---CCHHHHHHHHHHcCC
Confidence 34556665565554 4788899999999999999999999994 344444333356665
No 185
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=92.93 E-value=0.14 Score=44.80 Aligned_cols=48 Identities=15% Similarity=0.043 Sum_probs=33.6
Q ss_pred EEEcCCchhhHHHHHHcCCcEEEEecCCCCcccccCCCCCCCCCEEECChhHHHHHHH
Q 017785 306 CMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKA 363 (366)
Q Consensus 306 l~VGDs~~~Di~~a~~aG~~tv~V~~G~~~~~~l~~~~~~~~pd~v~~sl~~l~~~~~ 363 (366)
++|.|++ .-+..+.+.|+++++..+...+... .-..+.|++|+.+++-
T Consensus 139 vlIDD~~-~n~~~~~~~g~~~iLfd~p~Nr~~~---------~~~Rv~~W~ei~~~i~ 186 (191)
T PF06941_consen 139 VLIDDRP-HNLEQFANAGIPVILFDQPYNRDES---------NFPRVNNWEEIEDLIL 186 (191)
T ss_dssp EEEESSS-HHHSS-SSESSEEEEE--GGGTT-----------TSEEE-STTSHHHHHH
T ss_pred EEecCCh-HHHHhccCCCceEEEEcCCCCCCCC---------CCccCCCHHHHHHHHH
Confidence 7899999 5588899999999998775544222 4788999999887663
No 186
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=92.75 E-value=1.4 Score=41.42 Aligned_cols=39 Identities=26% Similarity=0.361 Sum_probs=33.1
Q ss_pred EEEEecceeEEeC-------------------CEeCCCHHHHHHHHHHCC-CeEEEEeC
Q 017785 85 TFIFDCDGVIWKG-------------------DKLIDGVPETLDMLRSKG-KRLVFVTN 123 (366)
Q Consensus 85 ~viFDiDGTL~d~-------------------~~~~~~~~~ai~~l~~~g-~~~~~~Tn 123 (366)
++|.|+|.|+..+ ...+|++....+.+...| .++++++|
T Consensus 163 giISDiDDTV~~T~V~~~~r~~~~s~~l~~~tr~~ipGV~~~yr~l~~~~~apvfYvSn 221 (373)
T COG4850 163 GIISDIDDTVKVTGVTEGPRKAGRSLLLHALTRQVIPGVSAWYRALTNLGDAPVFYVSN 221 (373)
T ss_pred eeeeccccceEecccccchHHHHHHhhhcccccCCCCCHHHHHHHHHhcCCCCeEEecC
Confidence 6899999999874 255888888999998887 78999998
No 187
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=92.34 E-value=2.8 Score=44.10 Aligned_cols=57 Identities=18% Similarity=0.254 Sum_probs=39.3
Q ss_pred cCcEEEEecceeE----EeCCEeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCC
Q 017785 82 SVETFIFDCDGVI----WKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGL 141 (366)
Q Consensus 82 ~ik~viFDiDGTL----~d~~~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~ 141 (366)
..+.+.+-.|+++ .-.+.+-|++.++++.+++.|+++..+|. -++......-+++|+
T Consensus 424 G~~~l~va~~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTG---Dn~~TA~aIA~elGI 484 (679)
T PRK01122 424 GGTPLVVAEDNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITG---DNPLTAAAIAAEAGV 484 (679)
T ss_pred CCcEEEEEECCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECC---CCHHHHHHHHHHcCC
Confidence 3455666555554 44788899999999999999999999994 333333333355555
No 188
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=92.09 E-value=0.076 Score=46.75 Aligned_cols=30 Identities=17% Similarity=0.349 Sum_probs=22.5
Q ss_pred CcEEEEecceeEEeCCEeC--CCHHHHHHHHH
Q 017785 83 VETFIFDCDGVIWKGDKLI--DGVPETLDMLR 112 (366)
Q Consensus 83 ik~viFDiDGTL~d~~~~~--~~~~~ai~~l~ 112 (366)
|++|+||.||||+++...+ +....+++.+.
T Consensus 1 i~~i~fDktGTLt~~~~~v~~~~~~~~~~~~~ 32 (215)
T PF00702_consen 1 IDAICFDKTGTLTQGKMSVAPPSNEAALAIAA 32 (215)
T ss_dssp ESEEEEECCTTTBESHHEEESCSHHHHHHHHH
T ss_pred CeEEEEecCCCcccCeEEEEeccHHHHHHHHH
Confidence 5799999999999988777 44555554443
No 189
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=91.93 E-value=0.39 Score=43.74 Aligned_cols=91 Identities=11% Similarity=0.011 Sum_probs=56.0
Q ss_pred CHHhHHHHHHHHHcCCCcEEEEecCCceeecCCCccccCCCccce-eeeeeecCcccccCCCcHHHHHHHHHHcCCCCCc
Q 017785 226 NYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVG-AFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQ 304 (366)
Q Consensus 226 ~y~~l~~a~~~l~~~~g~~~i~sn~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~gKP~p~~~~~a~~~lgv~~~~ 304 (366)
.|+...+++..+++......++||..+.. ......+ ....+.. .++...+..... ...+..+++++|+++++
T Consensus 25 ~~pga~e~L~~L~~~G~~~~ivTN~~~~~-~~~~~~L-~~~gl~~~~~~~Ii~s~~~~-----~~~l~~~~~~~~~~~~~ 97 (242)
T TIGR01459 25 TYPGAVQNLNKIIAQGKPVYFVSNSPRNI-FSLHKTL-KSLGINADLPEMIISSGEIA-----VQMILESKKRFDIRNGI 97 (242)
T ss_pred cCccHHHHHHHHHHCCCEEEEEeCCCCCh-HHHHHHH-HHCCCCccccceEEccHHHH-----HHHHHhhhhhccCCCce
Confidence 47888999999987655678889976521 1100111 1111222 333333333211 13566677888999999
Q ss_pred EEEEcCCchhhHHHHHHcCC
Q 017785 305 ICMVGDRLDTDILFGQNGGC 324 (366)
Q Consensus 305 vl~VGDs~~~Di~~a~~aG~ 324 (366)
|++|||+. .|++.....|.
T Consensus 98 ~~~vGd~~-~d~~~~~~~~~ 116 (242)
T TIGR01459 98 IYLLGHLE-NDIINLMQCYT 116 (242)
T ss_pred EEEeCCcc-cchhhhcCCCc
Confidence 99999997 89887765554
No 190
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=91.66 E-value=2.8 Score=44.96 Aligned_cols=48 Identities=23% Similarity=0.195 Sum_probs=36.6
Q ss_pred eeEEeCCEeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCC
Q 017785 92 GVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT 142 (366)
Q Consensus 92 GTL~d~~~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~ 142 (366)
|.+.=.+.+-|++.++++.+++.|+++..+|+ -+.......-+++|+.
T Consensus 435 Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTG---D~~~tA~~IA~~lGI~ 482 (755)
T TIGR01647 435 GLLPLFDPPRHDTKETIERARHLGVEVKMVTG---DHLAIAKETARRLGLG 482 (755)
T ss_pred EEeeccCCChhhHHHHHHHHHHCCCeEEEECC---CCHHHHHHHHHHcCCC
Confidence 33444778899999999999999999999994 4555444444788884
No 191
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=91.39 E-value=1.7 Score=36.27 Aligned_cols=88 Identities=31% Similarity=0.423 Sum_probs=59.4
Q ss_pred CEeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCCCCcCceeccH---------HHHHHHHHhcCCCCCC
Q 017785 98 DKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASS---------FAAAAYLKSIDFPKDK 168 (366)
Q Consensus 98 ~~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~~~~~~i~~~~---------~~~~~~l~~~~~~~~~ 168 (366)
.++.|++.+.|+.|+++|++++++||+ +.......++.+|+....+.++.+. ......+++.+... .
T Consensus 76 ~~~~~~~~~~L~~l~~~~~~~~i~Sn~---~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~p-~ 151 (176)
T PF13419_consen 76 LQPYPGVRELLERLKAKGIPLVIVSNG---SRERIERVLERLGLDDYFDEIISSDDVGSRKPDPDAYRRALEKLGIPP-E 151 (176)
T ss_dssp EEESTTHHHHHHHHHHTTSEEEEEESS---EHHHHHHHHHHTTHGGGCSEEEEGGGSSSSTTSHHHHHHHHHHHTSSG-G
T ss_pred cchhhhhhhhhhhcccccceeEEeecC---CcccccccccccccccccccccccchhhhhhhHHHHHHHHHHHcCCCc-c
Confidence 377999999999999999999999985 5666777788898874445665443 22333444444443 4
Q ss_pred eEEEeccc-chHHHHHHcCCee
Q 017785 169 KVYVVGED-GILKELELAGFQY 189 (366)
Q Consensus 169 ~~~~~g~~-~~~~~l~~~g~~~ 189 (366)
.++++|.. .-++..++.|+..
T Consensus 152 ~~~~vgD~~~d~~~A~~~G~~~ 173 (176)
T PF13419_consen 152 EILFVGDSPSDVEAAKEAGIKT 173 (176)
T ss_dssp GEEEEESSHHHHHHHHHTTSEE
T ss_pred eEEEEeCCHHHHHHHHHcCCeE
Confidence 45566543 3456667777754
No 192
>PLN03190 aminophospholipid translocase; Provisional
Probab=90.55 E-value=6.5 Score=44.21 Aligned_cols=51 Identities=18% Similarity=0.221 Sum_probs=36.2
Q ss_pred CcEEEEcCCchhhHHHHHHcCCcEEEEecCCCCcccccCCCCCCCCCEEECChhHHHHHH
Q 017785 303 SQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLK 362 (366)
Q Consensus 303 ~~vl~VGDs~~~Di~~a~~aG~~tv~V~~G~~~~~~l~~~~~~~~pd~v~~sl~~l~~~~ 362 (366)
.-+++|||.. ||+.|.++|-+.. +| .|....+.. ..+||.+..+..|..++
T Consensus 872 ~vtlaIGDGa-NDv~mIq~AdVGI-GI-sG~EG~qA~------~aSDfaI~~Fr~L~rLL 922 (1178)
T PLN03190 872 DMTLAIGDGA-NDVSMIQMADVGV-GI-SGQEGRQAV------MASDFAMGQFRFLVPLL 922 (1178)
T ss_pred cEEEEECCCc-chHHHHHhcCeee-ee-cCchhHHHH------HhhccchhhhHHHHHHH
Confidence 4699999997 9999999998322 22 232222232 35899999999887765
No 193
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=90.53 E-value=3.9 Score=45.56 Aligned_cols=48 Identities=29% Similarity=0.364 Sum_probs=34.6
Q ss_pred eeEEeCCEeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCC
Q 017785 92 GVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT 142 (366)
Q Consensus 92 GTL~d~~~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~ 142 (366)
|.+.=.+++-+++.++|+.+++.|+++..+|+. ........-++.|+-
T Consensus 624 G~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD---~~~TA~~IA~~~~ii 671 (1057)
T TIGR01652 624 GATAIEDKLQEGVPETIELLRQAGIKIWVLTGD---KVETAINIGYSCRLL 671 (1057)
T ss_pred EEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCC---cHHHHHHHHHHhCCC
Confidence 444446778889999999999999999999953 333333333666663
No 194
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=90.27 E-value=0.32 Score=46.74 Aligned_cols=81 Identities=26% Similarity=0.423 Sum_probs=54.1
Q ss_pred ccCcEEEEecceeEEeCC-------------EeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHH-----HHHHH----HHh
Q 017785 81 DSVETFIFDCDGVIWKGD-------------KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRK-----QYGKK----FET 138 (366)
Q Consensus 81 ~~ik~viFDiDGTL~d~~-------------~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~-----~~~~~----l~~ 138 (366)
..-|.+.||+||||+|+. -+.+....-++.+.+.|+..+|.||+.+..+. ++.++ ...
T Consensus 73 ~~~K~i~FD~dgtlI~t~sg~vf~~~~~dw~~l~~~vp~Klktl~~~g~~l~iftnq~~i~r~~~~~~~f~~Ki~~i~an 152 (422)
T KOG2134|consen 73 GGSKIIMFDYDGTLIDTKSGKVFPKGSMDWRILFPEVPSKLKTLYQDGIKLFIFTNQNGIARGKLELEEFKKKIKAIVAN 152 (422)
T ss_pred CCcceEEEecCCceeecCCcceeeccCccceeeccccchhhhhhccCCeEEEEEecccccccCcchHHHHHHHHHHHHHh
Confidence 356789999999999853 24666778899999999999999997655432 23332 244
Q ss_pred cCCCCC------cCceeccHHHHHHHHHh
Q 017785 139 LGLTVT------EEEIFASSFAAAAYLKS 161 (366)
Q Consensus 139 lG~~~~------~~~i~~~~~~~~~~l~~ 161 (366)
+|+++. ...+.-+...+.+++.+
T Consensus 153 l~vPi~~~~A~~~~~yRKP~tGMwe~~~~ 181 (422)
T KOG2134|consen 153 LGVPIQLLAAIIKGKYRKPSTGMWEFLKR 181 (422)
T ss_pred cCCceEEeeeccCCcccCcchhHHHHHHH
Confidence 676542 13333444556666653
No 195
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=90.24 E-value=0.41 Score=51.91 Aligned_cols=56 Identities=16% Similarity=0.268 Sum_probs=41.4
Q ss_pred CcEEEEecceeEEeC---C------------EeCCCHHHHHHHHHHC-CCeEEEEeCCCCCCHHHHHHHHHhcCC
Q 017785 83 VETFIFDCDGVIWKG---D------------KLIDGVPETLDMLRSK-GKRLVFVTNNSTKSRKQYGKKFETLGL 141 (366)
Q Consensus 83 ik~viFDiDGTL~d~---~------------~~~~~~~~ai~~l~~~-g~~~~~~Tn~sg~~~~~~~~~l~~lG~ 141 (366)
-.+++||+||||..- . .+.++..++|+.|.+. +..++++| ||++..+.+.+...++
T Consensus 591 ~RLlfLDyDGTLap~~~~P~~~~~~~~~~~a~p~p~l~~~L~~L~~dp~n~VaIVS---GR~~~~Le~~fg~~~L 662 (934)
T PLN03064 591 NRLLILGFNATLTEPVDTPGRRGDQIKEMELRLHPELKEPLRALCSDPKTTIVVLS---GSDRSVLDENFGEFDM 662 (934)
T ss_pred ceEEEEecCceeccCCCCcccccccccccccCCCHHHHHHHHHHHhCCCCeEEEEe---CCCHHHHHHHhCCCCc
Confidence 358999999999862 1 1234467888888765 56788888 8999999988866554
No 196
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=89.49 E-value=14 Score=39.81 Aligned_cols=52 Identities=19% Similarity=0.212 Sum_probs=34.9
Q ss_pred CCCcEEEEcCCchhhHHHHHHcCCcEEEEecCCCCcccccCCCCCCCCCEEE--CChhHHHHHH
Q 017785 301 QKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYT--NKISDFLSLK 362 (366)
Q Consensus 301 ~~~~vl~VGDs~~~Di~~a~~aG~~tv~V~~G~~~~~~l~~~~~~~~pd~v~--~sl~~l~~~~ 362 (366)
+...+.||||.. ||-.+...|- |+|.-|.+..-..+. +|+++ ++|.+++..+
T Consensus 784 ~~~~VaMVGDGI-NDaPALA~Ad---VGIaig~gs~vAiea------ADIVLmrn~L~~v~~ai 837 (951)
T KOG0207|consen 784 NGGPVAMVGDGI-NDAPALAQAD---VGIAIGAGSDVAIEA------ADIVLMRNDLRDVPFAI 837 (951)
T ss_pred cCCcEEEEeCCC-CccHHHHhhc---cceeeccccHHHHhh------CCEEEEccchhhhHHHH
Confidence 447799999998 9999888877 444445555445543 67665 5666665543
No 197
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=89.18 E-value=1.1 Score=41.39 Aligned_cols=60 Identities=20% Similarity=0.305 Sum_probs=44.4
Q ss_pred hccCcEEEEecceeEEeCCE----eCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCC
Q 017785 80 IDSVETFIFDCDGVIWKGDK----LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT 142 (366)
Q Consensus 80 ~~~ik~viFDiDGTL~d~~~----~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~ 142 (366)
+.....|+||+|-||+..+. ..|.+.+.+..|++.|-.+++=+- -+++-+..-+++++++
T Consensus 119 ~~~phVIVfDlD~TLItd~~~v~Ir~~~v~~sL~~Lk~~g~vLvLWSy---G~~eHV~~sl~~~~L~ 182 (297)
T PF05152_consen 119 WEPPHVIVFDLDSTLITDEGDVRIRDPAVYDSLRELKEQGCVLVLWSY---GNREHVRHSLKELKLE 182 (297)
T ss_pred CCCCcEEEEECCCcccccCCccccCChHHHHHHHHHHHcCCEEEEecC---CCHHHHHHHHHHhCCc
Confidence 34566899999999996433 235578999999999977766663 3566666677888876
No 198
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=88.01 E-value=8 Score=34.65 Aligned_cols=35 Identities=20% Similarity=0.342 Sum_probs=25.8
Q ss_pred CCCCCcEEEEcCCchhhHHH-HHHcCCcEEEEecCCC
Q 017785 299 GIQKSQICMVGDRLDTDILF-GQNGGCKTLLVLSGVT 334 (366)
Q Consensus 299 gv~~~~vl~VGDs~~~Di~~-a~~aG~~tv~V~~G~~ 334 (366)
|+.-++.++|||+- ||+-. .+-.+.+.+..+.|..
T Consensus 179 gv~yer~iYvGDG~-nD~CP~l~Lr~~D~ampRkgfp 214 (256)
T KOG3120|consen 179 GVRYERLIYVGDGA-NDFCPVLRLRACDVAMPRKGFP 214 (256)
T ss_pred CCceeeEEEEcCCC-CCcCcchhcccCceecccCCCc
Confidence 67778999999997 99754 4444556676677664
No 199
>KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism]
Probab=87.74 E-value=1.1 Score=45.98 Aligned_cols=63 Identities=27% Similarity=0.432 Sum_probs=41.0
Q ss_pred CcEEEEecceeEEeCCEe------------CCCHHHHHHHHHHCCCeEEEEeCCCCC---CHHHHHHHHHhcCCCCCc
Q 017785 83 VETFIFDCDGVIWKGDKL------------IDGVPETLDMLRSKGKRLVFVTNNSTK---SRKQYGKKFETLGLTVTE 145 (366)
Q Consensus 83 ik~viFDiDGTL~d~~~~------------~~~~~~ai~~l~~~g~~~~~~Tn~sg~---~~~~~~~~l~~lG~~~~~ 145 (366)
-|.||.|+|||+..++.+ ..++.+...++.++|+.+.++|..+-- ....|.+.+++-|-.++.
T Consensus 530 ~kIVISDIDGTITKSDvLGh~lp~iGkDWTh~GVAkLyt~Ik~NGYk~lyLSARaIgQA~~TR~yL~nv~QdG~~LPd 607 (738)
T KOG2116|consen 530 DKIVISDIDGTITKSDVLGHVLPMIGKDWTHTGVAKLYTKIKENGYKILYLSARAIGQADSTRQYLKNVEQDGKKLPD 607 (738)
T ss_pred CcEEEecCCCceEhhhhhhhhhhhhcCcchhhhHHHHHHHHHhCCeeEEEEehhhhhhhHHHHHHHHHHhhcCccCCC
Confidence 568999999999987533 333455667778999999999953211 123445555555554443
No 200
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=87.41 E-value=2.4 Score=37.43 Aligned_cols=41 Identities=12% Similarity=0.118 Sum_probs=31.2
Q ss_pred cCcEEEEecceeEEeCC--------EeCCCHHHHHHHHHHCCCeEEEEeC
Q 017785 82 SVETFIFDCDGVIWKGD--------KLIDGVPETLDMLRSKGKRLVFVTN 123 (366)
Q Consensus 82 ~ik~viFDiDGTL~d~~--------~~~~~~~~ai~~l~~~g~~~~~~Tn 123 (366)
.-|+++.|+|+||++.. -.-|.+.+.|+.+.+ ...+++-|.
T Consensus 20 ~kklLVLDLDeTLvh~~~~~~~~~~~kRP~l~eFL~~~~~-~feIvVwTA 68 (195)
T TIGR02245 20 GKKLLVLDIDYTLFDHRSPAETGEELMRPYLHEFLTSAYE-DYDIVIWSA 68 (195)
T ss_pred CCcEEEEeCCCceEcccccCCCceEEeCCCHHHHHHHHHh-CCEEEEEec
Confidence 45799999999999863 235677888887766 677777774
No 201
>KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=87.24 E-value=2.2 Score=35.79 Aligned_cols=63 Identities=14% Similarity=0.274 Sum_probs=48.0
Q ss_pred cCcEEEEecceeEE--eCCEeCCCHHHHHHHHHH-CC-CeEEEEeCCCCCC----HHHHHHHH-HhcCCCCC
Q 017785 82 SVETFIFDCDGVIW--KGDKLIDGVPETLDMLRS-KG-KRLVFVTNNSTKS----RKQYGKKF-ETLGLTVT 144 (366)
Q Consensus 82 ~ik~viFDiDGTL~--d~~~~~~~~~~ai~~l~~-~g-~~~~~~Tn~sg~~----~~~~~~~l-~~lG~~~~ 144 (366)
.+|+|.||-|.+|. .+..+||.-..-++.++. .| ..+.+++|..|.. ..+.++.| .+.|+++-
T Consensus 42 ~ikavVlDKDNcit~P~~~~Iwp~~l~~ie~~~~vygek~i~v~SNsaG~~~~D~d~s~Ak~le~k~gIpVl 113 (190)
T KOG2961|consen 42 GIKAVVLDKDNCITAPYSLAIWPPLLPSIERCKAVYGEKDIAVFSNSAGLTEYDHDDSKAKALEAKIGIPVL 113 (190)
T ss_pred CceEEEEcCCCeeeCCcccccCchhHHHHHHHHHHhCcccEEEEecCcCccccCCchHHHHHHHHhhCCceE
Confidence 79999999999998 478889988888888774 34 5678889877762 34566677 56888653
No 202
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=87.11 E-value=5.9 Score=34.41 Aligned_cols=87 Identities=21% Similarity=0.287 Sum_probs=53.1
Q ss_pred EeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCCCCcCceeccH---------HHHHHHHHhcCCCCCCe
Q 017785 99 KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASS---------FAAAAYLKSIDFPKDKK 169 (366)
Q Consensus 99 ~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~~~~~~i~~~~---------~~~~~~l~~~~~~~~~~ 169 (366)
.++|++.++|+.|+++|+++.++||. +...+...++.+|+.-.-+.++.+. ......+...+... ..
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~---~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p-~~ 167 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNG---SPAMLKSLVKHAGLDDPFDAVLSADAVRAYKPAPQVYQLALEALGVPP-DE 167 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCC---CHHHHHHHHHHCCChhhhheeEehhhcCCCCCCHHHHHHHHHHhCCCh-hh
Confidence 57899999999999999999999984 3455566678888753334454432 11222333334332 33
Q ss_pred EEEecccc-hHHHHHHcCCee
Q 017785 170 VYVVGEDG-ILKELELAGFQY 189 (366)
Q Consensus 170 ~~~~g~~~-~~~~l~~~g~~~ 189 (366)
+.++|... -....+..|++.
T Consensus 168 ~~~vgD~~~Di~~A~~~G~~~ 188 (198)
T TIGR01428 168 VLFVASNPWDLGGAKKFGFKT 188 (198)
T ss_pred EEEEeCCHHHHHHHHHCCCcE
Confidence 55555432 234456667653
No 203
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=87.10 E-value=1.1 Score=37.93 Aligned_cols=22 Identities=14% Similarity=-0.129 Sum_probs=15.4
Q ss_pred CCCHHHHHHHHHHCCCeEEEEeC
Q 017785 101 IDGVPETLDMLRSKGKRLVFVTN 123 (366)
Q Consensus 101 ~~~~~~ai~~l~~~g~~~~~~Tn 123 (366)
.|++.+.++.+.+. ..+.++|+
T Consensus 60 rPgv~efL~~l~~~-yel~I~T~ 81 (156)
T TIGR02250 60 RPFLHEFLKEASKL-YEMHVYTM 81 (156)
T ss_pred CCCHHHHHHHHHhh-cEEEEEeC
Confidence 56777777777644 77777776
No 204
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=86.81 E-value=1.5 Score=42.81 Aligned_cols=71 Identities=24% Similarity=0.399 Sum_probs=42.8
Q ss_pred cCcEEEEecceeEEeCCEe------------CCCHHHHHHHHHHCCCeEEEEeCCCCC---CHHHHHHHHHhcCCCCCcC
Q 017785 82 SVETFIFDCDGVIWKGDKL------------IDGVPETLDMLRSKGKRLVFVTNNSTK---SRKQYGKKFETLGLTVTEE 146 (366)
Q Consensus 82 ~ik~viFDiDGTL~d~~~~------------~~~~~~ai~~l~~~g~~~~~~Tn~sg~---~~~~~~~~l~~lG~~~~~~ 146 (366)
..|.|++||||||..++-. ..++....-.+-.+|..+.++|..+-- +...+....++-|..++..
T Consensus 374 n~kiVVsDiDGTITkSD~~Ghv~~miGkdwth~gVAkLYtdI~rNGYkI~YltsR~~Gqa~sTrsylrnieQngykLpdg 453 (580)
T COG5083 374 NKKIVVSDIDGTITKSDALGHVKQMIGKDWTHNGVAKLYTDIDRNGYKIKYLTSRSYGQADSTRSYLRNIEQNGYKLPDG 453 (580)
T ss_pred CCcEEEEecCCcEEehhhHHHHHHHhccchhhcchhhhhhhhccCceEEEEEecccccchhhhhhHHHhhhhcCccCCCC
Confidence 5779999999999987533 112223333344688899888853211 1223444446667777665
Q ss_pred ceeccH
Q 017785 147 EIFASS 152 (366)
Q Consensus 147 ~i~~~~ 152 (366)
-++.+-
T Consensus 454 pviLsp 459 (580)
T COG5083 454 PVILSP 459 (580)
T ss_pred CEeecc
Confidence 555554
No 205
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=85.28 E-value=8.6 Score=33.63 Aligned_cols=89 Identities=26% Similarity=0.324 Sum_probs=55.6
Q ss_pred CCEeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCCCCcCceecc---------HHHHHHHHHhcCCCCC
Q 017785 97 GDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFAS---------SFAAAAYLKSIDFPKD 167 (366)
Q Consensus 97 ~~~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~~~~~~i~~~---------~~~~~~~l~~~~~~~~ 167 (366)
.-.++|++.+.|+.|+++|+++.++||+ +.......++.+|+.-.-+.++.+ .......++..+...
T Consensus 73 ~~~~~~g~~~~L~~L~~~g~~~~i~Sn~---~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~- 148 (205)
T TIGR01454 73 EVEVFPGVPELLAELRADGVGTAIATGK---SGPRARSLLEALGLLPLFDHVIGSDEVPRPKPAPDIVREALRLLDVPP- 148 (205)
T ss_pred ccccCCCHHHHHHHHHHCCCeEEEEeCC---chHHHHHHHHHcCChhheeeEEecCcCCCCCCChHHHHHHHHHcCCCh-
Confidence 3477999999999999999999999974 344455566888875332333332 122223344444432
Q ss_pred CeEEEeccc-chHHHHHHcCCee
Q 017785 168 KKVYVVGED-GILKELELAGFQY 189 (366)
Q Consensus 168 ~~~~~~g~~-~~~~~l~~~g~~~ 189 (366)
..++++|.. .-.+..+..|++.
T Consensus 149 ~~~l~igD~~~Di~aA~~~Gi~~ 171 (205)
T TIGR01454 149 EDAVMVGDAVTDLASARAAGTAT 171 (205)
T ss_pred hheEEEcCCHHHHHHHHHcCCeE
Confidence 346666654 2355667778764
No 206
>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3.1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm
Probab=84.39 E-value=1.9 Score=39.52 Aligned_cols=60 Identities=22% Similarity=0.386 Sum_probs=42.5
Q ss_pred EEEEecceeEEeC--CEeC-------------------------CCHHHHHHHHHHC------CCeEEEEeCCCCCCHHH
Q 017785 85 TFIFDCDGVIWKG--DKLI-------------------------DGVPETLDMLRSK------GKRLVFVTNNSTKSRKQ 131 (366)
Q Consensus 85 ~viFDiDGTL~d~--~~~~-------------------------~~~~~ai~~l~~~------g~~~~~~Tn~sg~~~~~ 131 (366)
-|.||-|+||.+. ++++ ......|.++|++ -++..++|..+..+..-
T Consensus 123 RIAFDgDaVLfsDesE~vy~~~GL~~F~~~E~~~a~~Pl~~GP~~~fl~~L~~lQ~~~~~~~~piRtalVTAR~apah~R 202 (264)
T PF06189_consen 123 RIAFDGDAVLFSDESERVYQEQGLEAFHEHEKENADKPLPEGPFKDFLKKLSKLQKKFPPENSPIRTALVTARSAPAHER 202 (264)
T ss_pred EEEEcCCeEeecCcchHhHHhccHHHHHHHHHHhccCCCcCCCHHHHHHHHHHHHHhcCCCCCceEEEEEEcCCCchhHH
Confidence 4799999999973 2221 1122455556543 34678999888888888
Q ss_pred HHHHHHhcCCCCC
Q 017785 132 YGKKFETLGLTVT 144 (366)
Q Consensus 132 ~~~~l~~lG~~~~ 144 (366)
..+.|+.||+.++
T Consensus 203 vI~TLr~Wgv~vD 215 (264)
T PF06189_consen 203 VIRTLRSWGVRVD 215 (264)
T ss_pred HHHHHHHcCCcHh
Confidence 8899999999886
No 207
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=84.38 E-value=8.5 Score=35.03 Aligned_cols=86 Identities=19% Similarity=0.220 Sum_probs=53.2
Q ss_pred eCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCCCCcCceeccHH---------HHHHHHHhcCCCCCCeE
Q 017785 100 LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSF---------AAAAYLKSIDFPKDKKV 170 (366)
Q Consensus 100 ~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~~~~~~i~~~~~---------~~~~~l~~~~~~~~~~~ 170 (366)
++|++.+.|+.|+++|+++.++||. +.......++.+|+.-.-+.++.+.. .....+...+... ..+
T Consensus 109 l~pgv~e~L~~L~~~g~~l~I~Tn~---~~~~~~~~l~~~gl~~~Fd~iv~~~~~~~~KP~p~~~~~a~~~~~~~~-~~~ 184 (248)
T PLN02770 109 PLNGLYKLKKWIEDRGLKRAAVTNA---PRENAELMISLLGLSDFFQAVIIGSECEHAKPHPDPYLKALEVLKVSK-DHT 184 (248)
T ss_pred cCccHHHHHHHHHHcCCeEEEEeCC---CHHHHHHHHHHcCChhhCcEEEecCcCCCCCCChHHHHHHHHHhCCCh-hHE
Confidence 4678889999999999999999973 56666667788888643344433321 1222333334332 335
Q ss_pred EEeccc-chHHHHHHcCCee
Q 017785 171 YVVGED-GILKELELAGFQY 189 (366)
Q Consensus 171 ~~~g~~-~~~~~l~~~g~~~ 189 (366)
+++|.. .-.+..+..|+..
T Consensus 185 l~vgDs~~Di~aA~~aGi~~ 204 (248)
T PLN02770 185 FVFEDSVSGIKAGVAAGMPV 204 (248)
T ss_pred EEEcCCHHHHHHHHHCCCEE
Confidence 566643 2345556778764
No 208
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=82.17 E-value=11 Score=33.28 Aligned_cols=88 Identities=25% Similarity=0.270 Sum_probs=56.2
Q ss_pred CEeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCCCCcCceeccH---------HHHHHHHHhcCCCCCC
Q 017785 98 DKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASS---------FAAAAYLKSIDFPKDK 168 (366)
Q Consensus 98 ~~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~~~~~~i~~~~---------~~~~~~l~~~~~~~~~ 168 (366)
-.++|++.+.|+.|+++|+++.++||+. .......++.+|+.-.-+.++.+. ......+...+... .
T Consensus 93 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~---~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~-~ 168 (221)
T TIGR02253 93 LRVYPGVRDTLMELRESGYRLGIITDGL---PVKQWEKLERLGVRDFFDAVITSEEEGVEKPHPKIFYAALKRLGVKP-E 168 (221)
T ss_pred CCCCCCHHHHHHHHHHCCCEEEEEeCCc---hHHHHHHHHhCChHHhccEEEEeccCCCCCCCHHHHHHHHHHcCCCh-h
Confidence 3578999999999999999999999843 344455667888753334444331 22233344444432 4
Q ss_pred eEEEecccc--hHHHHHHcCCee
Q 017785 169 KVYVVGEDG--ILKELELAGFQY 189 (366)
Q Consensus 169 ~~~~~g~~~--~~~~l~~~g~~~ 189 (366)
.++++|... -....+..|+..
T Consensus 169 ~~~~igDs~~~di~~A~~aG~~~ 191 (221)
T TIGR02253 169 EAVMVGDRLDKDIKGAKNLGMKT 191 (221)
T ss_pred hEEEECCChHHHHHHHHHCCCEE
Confidence 567777542 456667788764
No 209
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=81.93 E-value=8.9 Score=34.03 Aligned_cols=87 Identities=9% Similarity=0.119 Sum_probs=54.2
Q ss_pred EeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCCCCcCceeccH---------HHHHHHHHhcCCCCCCe
Q 017785 99 KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASS---------FAAAAYLKSIDFPKDKK 169 (366)
Q Consensus 99 ~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~~~~~~i~~~~---------~~~~~~l~~~~~~~~~~ 169 (366)
.++|++.+.|+.++++|++++++||+ ........++.+|+.-..+.++.+. ......+...+... ..
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~i~S~~---~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~-~~ 167 (222)
T PRK10826 92 PLLPGVREALALCKAQGLKIGLASAS---PLHMLEAVLTMFDLRDYFDALASAEKLPYSKPHPEVYLNCAAKLGVDP-LT 167 (222)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCC---cHHHHHHHHHhCcchhcccEEEEcccCCCCCCCHHHHHHHHHHcCCCH-HH
Confidence 56888999999999999999999974 3445555567777754334443321 22334444444432 34
Q ss_pred EEEeccc-chHHHHHHcCCee
Q 017785 170 VYVVGED-GILKELELAGFQY 189 (366)
Q Consensus 170 ~~~~g~~-~~~~~l~~~g~~~ 189 (366)
++++|.. .-++..+..|++.
T Consensus 168 ~~~igDs~~Di~aA~~aG~~~ 188 (222)
T PRK10826 168 CVALEDSFNGMIAAKAARMRS 188 (222)
T ss_pred eEEEcCChhhHHHHHHcCCEE
Confidence 5666643 3456667778764
No 210
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=81.78 E-value=11 Score=34.74 Aligned_cols=86 Identities=13% Similarity=0.183 Sum_probs=52.6
Q ss_pred eCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCCCCcCceeccH---------HHHHHHHHhcCCCCCCeE
Q 017785 100 LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASS---------FAAAAYLKSIDFPKDKKV 170 (366)
Q Consensus 100 ~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~~~~~~i~~~~---------~~~~~~l~~~~~~~~~~~ 170 (366)
++|++.+.|+.|++.|+++.++||+ +...+...++.+|+.-.-+.++++. ......+...+... ..+
T Consensus 110 l~pg~~e~L~~L~~~g~~l~I~Tn~---~~~~~~~~l~~~gl~~~Fd~ii~~~d~~~~KP~Pe~~~~a~~~l~~~p-~~~ 185 (260)
T PLN03243 110 LRPGSREFVQALKKHEIPIAVASTR---PRRYLERAIEAVGMEGFFSVVLAAEDVYRGKPDPEMFMYAAERLGFIP-ERC 185 (260)
T ss_pred cCCCHHHHHHHHHHCCCEEEEEeCc---CHHHHHHHHHHcCCHhhCcEEEecccCCCCCCCHHHHHHHHHHhCCCh-HHe
Confidence 4677888999999999999999984 3455555567778753333443332 12223344444432 345
Q ss_pred EEeccc-chHHHHHHcCCee
Q 017785 171 YVVGED-GILKELELAGFQY 189 (366)
Q Consensus 171 ~~~g~~-~~~~~l~~~g~~~ 189 (366)
+++|.. .-++..+..|+..
T Consensus 186 l~IgDs~~Di~aA~~aG~~~ 205 (260)
T PLN03243 186 IVFGNSNSSVEAAHDGCMKC 205 (260)
T ss_pred EEEcCCHHHHHHHHHcCCEE
Confidence 566643 3466667778765
No 211
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=81.65 E-value=13 Score=32.48 Aligned_cols=88 Identities=24% Similarity=0.267 Sum_probs=55.7
Q ss_pred CEeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCCCCcCceeccH---------HHHHHHHHhcCCCCCC
Q 017785 98 DKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASS---------FAAAAYLKSIDFPKDK 168 (366)
Q Consensus 98 ~~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~~~~~~i~~~~---------~~~~~~l~~~~~~~~~ 168 (366)
..++|++.+.|+.|+++|+++.++||. +.......++.+|+.-..+.++.+. ......+...+... .
T Consensus 84 ~~~~~g~~~~L~~l~~~g~~~~i~S~~---~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~p~~~~~~~~~~~~~~-~ 159 (213)
T TIGR01449 84 TSVFPGVEATLGALRAKGLRLGLVTNK---PTPLARPLLELLGLAKYFSVLIGGDSLAQRKPHPDPLLLAAERLGVAP-Q 159 (213)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCC---CHHHHHHHHHHcCcHhhCcEEEecCCCCCCCCChHHHHHHHHHcCCCh-h
Confidence 467999999999999999999999973 4555566668888753333333221 22334444444432 3
Q ss_pred eEEEeccc-chHHHHHHcCCee
Q 017785 169 KVYVVGED-GILKELELAGFQY 189 (366)
Q Consensus 169 ~~~~~g~~-~~~~~l~~~g~~~ 189 (366)
.++++|.. .-.+..+..|++.
T Consensus 160 ~~~~igDs~~d~~aa~~aG~~~ 181 (213)
T TIGR01449 160 QMVYVGDSRVDIQAARAAGCPS 181 (213)
T ss_pred HeEEeCCCHHHHHHHHHCCCeE
Confidence 35666654 2355667788765
No 212
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=81.36 E-value=13 Score=32.65 Aligned_cols=87 Identities=20% Similarity=0.191 Sum_probs=53.6
Q ss_pred EeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCCCCcCceeccH---------HHHHHHHHhcCCCCCCe
Q 017785 99 KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASS---------FAAAAYLKSIDFPKDKK 169 (366)
Q Consensus 99 ~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~~~~~~i~~~~---------~~~~~~l~~~~~~~~~~ 169 (366)
.++|++.+.|+.|+++|+++.++||+ ....+...++.+|+.-.-+.++.+. ......+...+... ..
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~---~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~~-~~ 157 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTK---MRDTVEMGLKLTGLDEFFDVVITLDDVEHAKPDPEPVLKALELLGAKP-EE 157 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCC---CHHHHHHHHHHcCChhceeEEEecCcCCCCCCCcHHHHHHHHHcCCCH-HH
Confidence 35788999999999999999999974 4566666778888864333333321 22223333333322 34
Q ss_pred EEEeccc-chHHHHHHcCCee
Q 017785 170 VYVVGED-GILKELELAGFQY 189 (366)
Q Consensus 170 ~~~~g~~-~~~~~l~~~g~~~ 189 (366)
++++|.. .-++..+..|+..
T Consensus 158 ~~~iGDs~~Di~aa~~aG~~~ 178 (214)
T PRK13288 158 ALMVGDNHHDILAGKNAGTKT 178 (214)
T ss_pred EEEECCCHHHHHHHHHCCCeE
Confidence 5666644 2345556677754
No 213
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=81.36 E-value=13 Score=32.70 Aligned_cols=88 Identities=22% Similarity=0.216 Sum_probs=53.5
Q ss_pred EeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCC--CCcCceeccH---------HHHHHHHHhcCCCCC
Q 017785 99 KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT--VTEEEIFASS---------FAAAAYLKSIDFPKD 167 (366)
Q Consensus 99 ~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~--~~~~~i~~~~---------~~~~~~l~~~~~~~~ 167 (366)
.++|++.+.++.|+++|+++.++||+ ........++.+|+. -.-+.++.+. ......+...+....
T Consensus 87 ~l~~G~~~~L~~L~~~g~~~~ivT~~---~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~ 163 (220)
T TIGR03351 87 VALPGAEEAFRSLRSSGIKVALTTGF---DRDTAERLLEKLGWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTGVQDV 163 (220)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCC---chHHHHHHHHHhhhhhhccCCEEEcCCcCCCCCCCHHHHHHHHHHcCCCCh
Confidence 57899999999999999999999974 445555566777765 2223333332 222233444443212
Q ss_pred CeEEEeccc-chHHHHHHcCCee
Q 017785 168 KKVYVVGED-GILKELELAGFQY 189 (366)
Q Consensus 168 ~~~~~~g~~-~~~~~l~~~g~~~ 189 (366)
..++++|.. .-.+..+..|+..
T Consensus 164 ~~~~~igD~~~Di~aa~~aG~~~ 186 (220)
T TIGR03351 164 QSVAVAGDTPNDLEAGINAGAGA 186 (220)
T ss_pred hHeEEeCCCHHHHHHHHHCCCCe
Confidence 456777733 2355556777754
No 214
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=80.81 E-value=43 Score=37.51 Aligned_cols=50 Identities=18% Similarity=0.163 Sum_probs=39.1
Q ss_pred eeEEeCCEeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCCCC
Q 017785 92 GVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVT 144 (366)
Q Consensus 92 GTL~d~~~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~~~ 144 (366)
|-+.=.+.+-|++.++|+.+++.|+++..+| |.+.......-+++|+-..
T Consensus 649 Gli~~~d~lr~~~~~~I~~l~~agi~v~miT---GD~~~TA~~iA~~~gii~~ 698 (1054)
T TIGR01657 649 GFIVFENPLKPDTKEVIKELKRASIRTVMIT---GDNPLTAVHVARECGIVNP 698 (1054)
T ss_pred EEEEEecCCCccHHHHHHHHHHCCCeEEEEC---CCCHHHHHHHHHHcCCCCC
Confidence 5555567788999999999999999999999 5566555555588888443
No 215
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=80.79 E-value=11 Score=32.17 Aligned_cols=48 Identities=23% Similarity=0.344 Sum_probs=35.4
Q ss_pred CEeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCCCCcCceec
Q 017785 98 DKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFA 150 (366)
Q Consensus 98 ~~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~~~~~~i~~ 150 (366)
..++|++.+.|+.|++.|+++.++||+ ......++.+|+.-..+.++.
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~-----~~~~~~l~~~~l~~~f~~v~~ 134 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS-----KNADRILAKLGLTDYFDAIVD 134 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc-----hhHHHHHHHcChHHHCCEeee
Confidence 467999999999999999999999974 334455677887533344443
No 216
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=80.48 E-value=13 Score=32.41 Aligned_cols=85 Identities=18% Similarity=0.187 Sum_probs=50.6
Q ss_pred EeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCCCCcCceeccH---------HHHHHHHHhcCCCCCCe
Q 017785 99 KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASS---------FAAAAYLKSIDFPKDKK 169 (366)
Q Consensus 99 ~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~~~~~~i~~~~---------~~~~~~l~~~~~~~~~~ 169 (366)
.++|++.++|+.|++.|+++.++||.. . .+...++.+|+...-+.++.+. ......+...+... ..
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~---~-~~~~~l~~~~l~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~~-~~ 179 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFD---S-RLRGLLEALGLLEYFDFVVTSYEVGAEKPDPKIFQEALERAGISP-EE 179 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCc---h-hHHHHHHHCCcHHhcceEEeecccCCCCCCHHHHHHHHHHcCCCh-hH
Confidence 678999999999999999999999843 1 2445668888753334444332 11222233333322 34
Q ss_pred EEEecccc--hHHHHHHcCCe
Q 017785 170 VYVVGEDG--ILKELELAGFQ 188 (366)
Q Consensus 170 ~~~~g~~~--~~~~l~~~g~~ 188 (366)
++++|... -.+..+..|+.
T Consensus 180 ~~~IgD~~~~Di~~A~~aG~~ 200 (203)
T TIGR02252 180 ALHIGDSLRNDYQGARAAGWR 200 (203)
T ss_pred EEEECCCchHHHHHHHHcCCe
Confidence 56666542 24455666654
No 217
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=80.48 E-value=11 Score=33.84 Aligned_cols=85 Identities=19% Similarity=0.294 Sum_probs=51.6
Q ss_pred eCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCCCCcCceeccH---------HHHHHHHHhcCCCCCCeE
Q 017785 100 LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASS---------FAAAAYLKSIDFPKDKKV 170 (366)
Q Consensus 100 ~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~~~~~~i~~~~---------~~~~~~l~~~~~~~~~~~ 170 (366)
++|++.+.|+.|+++|++..++||+ ++......++.+|+.-.-+.++.+. ......+...+... ..+
T Consensus 94 ~~~g~~e~L~~Lk~~g~~~~i~Tn~---~~~~~~~~l~~~~l~~~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~p-~~~ 169 (224)
T PRK14988 94 LREDTVPFLEALKASGKRRILLTNA---HPHNLAVKLEHTGLDAHLDLLLSTHTFGYPKEDQRLWQAVAEHTGLKA-ERT 169 (224)
T ss_pred cCCCHHHHHHHHHhCCCeEEEEeCc---CHHHHHHHHHHCCcHHHCCEEEEeeeCCCCCCCHHHHHHHHHHcCCCh-HHE
Confidence 3678889999999999999999984 3455555667788743333343322 11222334444432 345
Q ss_pred EEeccc-chHHHHHHcCCe
Q 017785 171 YVVGED-GILKELELAGFQ 188 (366)
Q Consensus 171 ~~~g~~-~~~~~l~~~g~~ 188 (366)
+++|.. .-.+..+..|+.
T Consensus 170 l~igDs~~di~aA~~aG~~ 188 (224)
T PRK14988 170 LFIDDSEPILDAAAQFGIR 188 (224)
T ss_pred EEEcCCHHHHHHHHHcCCe
Confidence 666643 235566778886
No 218
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=79.73 E-value=2.2 Score=42.63 Aligned_cols=45 Identities=22% Similarity=0.387 Sum_probs=34.9
Q ss_pred HHHHHHHcCCCCCcEEEEcCCchhhHHHHHHc-CCcEEEEecCCCC
Q 017785 291 MDYLANKFGIQKSQICMVGDRLDTDILFGQNG-GCKTLLVLSGVTS 335 (366)
Q Consensus 291 ~~~a~~~lgv~~~~vl~VGDs~~~Di~~a~~a-G~~tv~V~~G~~~ 335 (366)
...+.+.+|..-++|++|||++..||...+.. ||+|++|-.....
T Consensus 284 ~~~l~~ll~~~g~~VLY~GDhi~~Di~~~k~~~gWrT~~Ii~ELe~ 329 (448)
T PF05761_consen 284 WDQLHKLLGWRGKEVLYFGDHIYGDILKSKKRHGWRTAAIIPELEQ 329 (448)
T ss_dssp HHHHHHHCT--GGGEEEEESSTTTTHHHHHHHH-SEEEEE-TTHHH
T ss_pred HHHHHHHHccCCCeEEEECCchhhhhhhhccccceEEEEEehhhhh
Confidence 45678888999999999999999999988877 9999999665543
No 219
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=79.59 E-value=20 Score=30.22 Aligned_cols=87 Identities=23% Similarity=0.305 Sum_probs=50.0
Q ss_pred CEeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCCCCcCceeccH---------HHHHHHHHhcCCCCCC
Q 017785 98 DKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASS---------FAAAAYLKSIDFPKDK 168 (366)
Q Consensus 98 ~~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~~~~~~i~~~~---------~~~~~~l~~~~~~~~~ 168 (366)
-.+.|++.+.++.|++.|+++.++||+... . ...+.++|+.-.-+.++.+. ......++..+... .
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~---~-~~~~~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~-~ 158 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPRD---H-AVLVQELGLRDLFDVVIFSGDVGRGKPDPDIYLLALKKLGLKP-E 158 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCchH---H-HHHHHhcCCHHHCCEEEEcCCCCCCCCCHHHHHHHHHHcCCCc-c
Confidence 357899999999999999999999985422 2 22334477753334444321 22223344444432 3
Q ss_pred eEEEecccc-hHHHHHHcCCee
Q 017785 169 KVYVVGEDG-ILKELELAGFQY 189 (366)
Q Consensus 169 ~~~~~g~~~-~~~~l~~~g~~~ 189 (366)
.++++|... -....+..|+..
T Consensus 159 ~~~~vgD~~~di~aA~~~G~~~ 180 (183)
T TIGR01509 159 ECLFVDDSPAGIEAAKAAGMHT 180 (183)
T ss_pred eEEEEcCCHHHHHHHHHcCCEE
Confidence 455555432 244456667643
No 220
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=79.43 E-value=9.8 Score=32.90 Aligned_cols=45 Identities=20% Similarity=0.227 Sum_probs=32.1
Q ss_pred CCCcHHHHHH--HHHHcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEecCC
Q 017785 284 GKPSTFMMDY--LANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGV 333 (366)
Q Consensus 284 gKP~p~~~~~--a~~~lgv~~~~vl~VGDs~~~Di~~a~~aG~~tv~V~~G~ 333 (366)
.||.|.-|.+ .++.-++ -++-||+- +||.+|+.+|.+.|-+++--
T Consensus 168 dk~k~~qy~Kt~~i~~~~~----~IhYGDSD-~Di~AAkeaG~RgIRilRAa 214 (237)
T COG3700 168 DKPKPGQYTKTQWIQDKNI----RIHYGDSD-NDITAAKEAGARGIRILRAA 214 (237)
T ss_pred CCCCcccccccHHHHhcCc----eEEecCCc-hhhhHHHhcCccceeEEecC
Confidence 3555544433 3444333 58999995 99999999999999987643
No 221
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=79.10 E-value=3.1 Score=36.51 Aligned_cols=52 Identities=33% Similarity=0.406 Sum_probs=33.5
Q ss_pred EEEEecceeEEeCC-EeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCCC
Q 017785 85 TFIFDCDGVIWKGD-KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTV 143 (366)
Q Consensus 85 ~viFDiDGTL~d~~-~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~~ 143 (366)
.++||.||||.-.. .+.|+..+.++.++.. ..+.++- -.++.+..+++|.++
T Consensus 13 l~lfdvdgtLt~~r~~~~~e~~~~l~~lr~~-v~ig~Vg------gsDl~k~~eqlG~~V 65 (252)
T KOG3189|consen 13 LCLFDVDGTLTPPRQKVTPEMLEFLQKLRKK-VTIGFVG------GSDLSKQQEQLGDNV 65 (252)
T ss_pred EEEEecCCccccccccCCHHHHHHHHHHhhh-eEEEEee------cHHHHHHHHHhchhH
Confidence 78999999998754 4455566777776553 3333443 245566667777654
No 222
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=78.80 E-value=16 Score=35.82 Aligned_cols=87 Identities=16% Similarity=0.210 Sum_probs=56.3
Q ss_pred eCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCCCCcCceeccH---------HHHHHHHHhcCCCCCCeE
Q 017785 100 LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASS---------FAAAAYLKSIDFPKDKKV 170 (366)
Q Consensus 100 ~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~~~~~~i~~~~---------~~~~~~l~~~~~~~~~~~ 170 (366)
++|++.+.|+.|+++|+++.++|| .++..+...++.+|+.-.-+.++.+. ......+...+... ..+
T Consensus 217 l~pGa~ElL~~Lk~~GiklaIaSn---~~~~~~~~~L~~lgL~~yFd~Iv~sddv~~~KP~Peifl~A~~~lgl~P-eec 292 (381)
T PLN02575 217 LRTGSQEFVNVLMNYKIPMALVST---RPRKTLENAIGSIGIRGFFSVIVAAEDVYRGKPDPEMFIYAAQLLNFIP-ERC 292 (381)
T ss_pred cCcCHHHHHHHHHHCCCeEEEEeC---CCHHHHHHHHHHcCCHHHceEEEecCcCCCCCCCHHHHHHHHHHcCCCc-ccE
Confidence 467888999999999999999997 45667777778888854333443332 12233344444433 346
Q ss_pred EEeccc-chHHHHHHcCCeee
Q 017785 171 YVVGED-GILKELELAGFQYL 190 (366)
Q Consensus 171 ~~~g~~-~~~~~l~~~g~~~~ 190 (366)
+++|.. .-.+..+..|+..+
T Consensus 293 l~IGDS~~DIeAAk~AGm~~I 313 (381)
T PLN02575 293 IVFGNSNQTVEAAHDARMKCV 313 (381)
T ss_pred EEEcCCHHHHHHHHHcCCEEE
Confidence 666653 34666777888653
No 223
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=78.62 E-value=2.1 Score=42.50 Aligned_cols=50 Identities=24% Similarity=0.485 Sum_probs=35.8
Q ss_pred cCcEEEEecceeEEeC---------CEe--------CCCHHHHHHHHHHCCCeEEEEeCCCCCCHHH
Q 017785 82 SVETFIFDCDGVIWKG---------DKL--------IDGVPETLDMLRSKGKRLVFVTNNSTKSRKQ 131 (366)
Q Consensus 82 ~ik~viFDiDGTL~d~---------~~~--------~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~ 131 (366)
.-|+.+.|+|+|||-+ -++ +...++.|..++++|+...+|+.|.-+...+
T Consensus 221 ~kK~LVLDLDNTLWGGVIGedGv~GI~Ls~~~~G~~fk~fQ~~Ik~l~kqGVlLav~SKN~~~da~e 287 (574)
T COG3882 221 SKKALVLDLDNTLWGGVIGEDGVDGIRLSNSAEGEAFKTFQNFIKGLKKQGVLLAVCSKNTEKDAKE 287 (574)
T ss_pred ccceEEEecCCcccccccccccccceeecCCCCchhHHHHHHHHHHHHhccEEEEEecCCchhhHHH
Confidence 4779999999999973 122 2223577888999999999999764444333
No 224
>PF04312 DUF460: Protein of unknown function (DUF460); InterPro: IPR007408 This is an archaeal protein of unknown function.
Probab=78.28 E-value=6.8 Score=32.28 Aligned_cols=55 Identities=18% Similarity=0.224 Sum_probs=39.3
Q ss_pred EEEEecceeEEeCCEe-CCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH-HhcCC
Q 017785 85 TFIFDCDGVIWKGDKL-IDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKF-ETLGL 141 (366)
Q Consensus 85 ~viFDiDGTL~d~~~~-~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l-~~lG~ 141 (366)
.-++|+||.|++-..- -....+.++.+.+.|.++.+.|.- .+..+..+++ ..++-
T Consensus 45 iAildL~G~~l~l~S~R~~~~~evi~~I~~~G~PviVAtDV--~p~P~~V~Kia~~f~A 101 (138)
T PF04312_consen 45 IAILDLDGELLDLKSSRNMSRSEVIEWISEYGKPVIVATDV--SPPPETVKKIARSFNA 101 (138)
T ss_pred EEEEecCCcEEEEEeecCCCHHHHHHHHHHcCCEEEEEecC--CCCcHHHHHHHHHhCC
Confidence 4589999999973222 223668889999999999999974 3445666666 55554
No 225
>PRK11587 putative phosphatase; Provisional
Probab=78.23 E-value=29 Score=30.63 Aligned_cols=42 Identities=21% Similarity=0.272 Sum_probs=31.8
Q ss_pred EeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCCC
Q 017785 99 KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTV 143 (366)
Q Consensus 99 ~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~~ 143 (366)
.++|++.+.|+.|+++|+++.++||++. ......++..|+..
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~---~~~~~~l~~~~l~~ 124 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSV---PVASARHKAAGLPA 124 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCc---hHHHHHHHhcCCCC
Confidence 4688899999999999999999998642 23344556777743
No 226
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=78.01 E-value=2.6 Score=36.26 Aligned_cols=13 Identities=46% Similarity=0.800 Sum_probs=12.1
Q ss_pred EEEecceeEEeCC
Q 017785 86 FIFDCDGVIWKGD 98 (366)
Q Consensus 86 viFDiDGTL~d~~ 98 (366)
|+||+||||++++
T Consensus 1 v~fD~DGTL~~~~ 13 (192)
T PF12710_consen 1 VIFDFDGTLTDSD 13 (192)
T ss_dssp EEEESBTTTBSSH
T ss_pred eEEecCcCeecCC
Confidence 6999999999988
No 227
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=77.03 E-value=23 Score=38.96 Aligned_cols=46 Identities=17% Similarity=0.229 Sum_probs=33.8
Q ss_pred CCEeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCCCCc
Q 017785 97 GDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTE 145 (366)
Q Consensus 97 ~~~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~~~~ 145 (366)
.+.+-+++.++|+.+++.|+++..+|+ -........-+++|+....
T Consensus 545 ~Dppr~~v~~aI~~l~~AGI~v~MiTG---D~~~TA~aIa~~~Gi~~~~ 590 (917)
T COG0474 545 EDPPREDVKEAIEELREAGIKVWMITG---DHVETAIAIAKECGIEAEA 590 (917)
T ss_pred cCCCCccHHHHHHHHHHCCCcEEEECC---CCHHHHHHHHHHcCCCCCC
Confidence 466788899999999999999999995 3343333333778865543
No 228
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=76.67 E-value=22 Score=30.57 Aligned_cols=41 Identities=24% Similarity=0.176 Sum_probs=31.2
Q ss_pred EeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCC
Q 017785 99 KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT 142 (366)
Q Consensus 99 ~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~ 142 (366)
.++|++.+.|+.++++|++++++||. ....+...++.+|++
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~---~~~~~~~~l~~~g~~ 120 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGG---IMCLAKKVAEKLNPD 120 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCC---cHHHHHHHHHHhCCC
Confidence 45788889999999999999999973 344444455778864
No 229
>PRK09449 dUMP phosphatase; Provisional
Probab=76.37 E-value=21 Score=31.51 Aligned_cols=88 Identities=20% Similarity=0.185 Sum_probs=55.0
Q ss_pred CEeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCCCCcCceeccH---------HHHHHHHHhcCCCCCC
Q 017785 98 DKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASS---------FAAAAYLKSIDFPKDK 168 (366)
Q Consensus 98 ~~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~~~~~~i~~~~---------~~~~~~l~~~~~~~~~ 168 (366)
-.++|++.+.|+.|+ .|+++.++||. +.......++.+|+.-.-+.++.+. ......+...+.....
T Consensus 94 ~~~~~g~~~~L~~L~-~~~~~~i~Tn~---~~~~~~~~l~~~~l~~~fd~v~~~~~~~~~KP~p~~~~~~~~~~~~~~~~ 169 (224)
T PRK09449 94 CTPLPGAVELLNALR-GKVKMGIITNG---FTELQQVRLERTGLRDYFDLLVISEQVGVAKPDVAIFDYALEQMGNPDRS 169 (224)
T ss_pred CccCccHHHHHHHHH-hCCeEEEEeCC---cHHHHHHHHHhCChHHHcCEEEEECccCCCCCCHHHHHHHHHHcCCCCcc
Confidence 357899999999999 67999999984 3444445568888753333443332 2223344444433224
Q ss_pred eEEEecccc--hHHHHHHcCCee
Q 017785 169 KVYVVGEDG--ILKELELAGFQY 189 (366)
Q Consensus 169 ~~~~~g~~~--~~~~l~~~g~~~ 189 (366)
.++++|... =....+..|+..
T Consensus 170 ~~~~vgD~~~~Di~~A~~aG~~~ 192 (224)
T PRK09449 170 RVLMVGDNLHSDILGGINAGIDT 192 (224)
T ss_pred cEEEEcCCcHHHHHHHHHCCCcE
Confidence 577777653 356777888864
No 230
>KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism]
Probab=75.70 E-value=11 Score=34.02 Aligned_cols=51 Identities=16% Similarity=0.145 Sum_probs=43.5
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEec-CCCC
Q 017785 284 GKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLS-GVTS 335 (366)
Q Consensus 284 gKP~p~~~~~a~~~lgv~~~~vl~VGDs~~~Di~~a~~aG~~tv~V~~-G~~~ 335 (366)
.|-.-..|..+.+.+|.++.|+++.-|.+ .-..+|+.+|+.+.++.+ |+.+
T Consensus 179 ~K~e~~sy~~I~~~Ig~s~~eiLfLTd~~-~Ea~aa~~aGl~a~l~~rPgna~ 230 (254)
T KOG2630|consen 179 LKVESQSYKKIGHLIGKSPREILFLTDVP-REAAAARKAGLQAGLVSRPGNAP 230 (254)
T ss_pred ceehhHHHHHHHHHhCCChhheEEeccCh-HHHHHHHhcccceeeeecCCCCC
Confidence 45556779999999999999999999998 999999999999888754 5433
No 231
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=75.12 E-value=24 Score=32.74 Aligned_cols=87 Identities=21% Similarity=0.257 Sum_probs=52.2
Q ss_pred EeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCCCCcCcee------ccHHHHHHHHHhcCCCCCCeEEE
Q 017785 99 KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIF------ASSFAAAAYLKSIDFPKDKKVYV 172 (366)
Q Consensus 99 ~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~~~~~~i~------~~~~~~~~~l~~~~~~~~~~~~~ 172 (366)
+++|++.+.|+.|+++|+++.++||. +...+...++.+|+.-.-+.++ .....+...+...+... ..+++
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~---~~~~~~~~L~~~gl~~~F~~vi~~~~~~~k~~~~~~~l~~~~~~p-~~~l~ 217 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSN---SRQNIEAFLQRQGLRSLFSVVQAGTPILSKRRALSQLVAREGWQP-AAVMY 217 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCC---CHHHHHHHHHHcCChhheEEEEecCCCCCCHHHHHHHHHHhCcCh-hHEEE
Confidence 34788899999999999999999974 4556666678888742212221 11222233333334332 34666
Q ss_pred ecccc-hHHHHHHcCCee
Q 017785 173 VGEDG-ILKELELAGFQY 189 (366)
Q Consensus 173 ~g~~~-~~~~l~~~g~~~ 189 (366)
+|... -++..+..|+..
T Consensus 218 IGDs~~Di~aA~~AG~~~ 235 (273)
T PRK13225 218 VGDETRDVEAARQVGLIA 235 (273)
T ss_pred ECCCHHHHHHHHHCCCeE
Confidence 66442 245556677754
No 232
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=73.41 E-value=27 Score=29.64 Aligned_cols=86 Identities=14% Similarity=0.220 Sum_probs=50.1
Q ss_pred CEeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCCCCcCceeccHH---------HHHHHHHhcCCCCCC
Q 017785 98 DKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSF---------AAAAYLKSIDFPKDK 168 (366)
Q Consensus 98 ~~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~~~~~~i~~~~~---------~~~~~l~~~~~~~~~ 168 (366)
..++|++.+.|+.|+++|+++.++||.. .. ...++.+|+...-+.++.+.. .....++..+... .
T Consensus 86 ~~~~pg~~~~L~~L~~~g~~~~i~s~~~--~~---~~~l~~~~l~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~-~ 159 (185)
T TIGR01990 86 ADVLPGIKNLLDDLKKNNIKIALASASK--NA---PTVLEKLGLIDYFDAIVDPAEIKKGKPDPEIFLAAAEGLGVSP-S 159 (185)
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCc--cH---HHHHHhcCcHhhCcEEEehhhcCCCCCChHHHHHHHHHcCCCH-H
Confidence 3578999999999999999999999732 22 234677887644444443321 1122233333322 3
Q ss_pred eEEEeccc-chHHHHHHcCCee
Q 017785 169 KVYVVGED-GILKELELAGFQY 189 (366)
Q Consensus 169 ~~~~~g~~-~~~~~l~~~g~~~ 189 (366)
.+.++|.. .-.+..+..|++.
T Consensus 160 ~~v~vgD~~~di~aA~~aG~~~ 181 (185)
T TIGR01990 160 ECIGIEDAQAGIEAIKAAGMFA 181 (185)
T ss_pred HeEEEecCHHHHHHHHHcCCEE
Confidence 35555533 2344555666643
No 233
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=72.48 E-value=26 Score=31.30 Aligned_cols=87 Identities=21% Similarity=0.214 Sum_probs=50.8
Q ss_pred EeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCCCCcCceeccH---------HHHHHHHHhcCCCCCCe
Q 017785 99 KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASS---------FAAAAYLKSIDFPKDKK 169 (366)
Q Consensus 99 ~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~~~~~~i~~~~---------~~~~~~l~~~~~~~~~~ 169 (366)
.++|++.+.++.|++.|+.+.++||+. .......++.+|+.-.-+.++... ......+...+... ..
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~---~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~l~~~p-~~ 170 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKP---EYLARLILPQLGWEQRCAVLIGGDTLAERKPHPLPLLVAAERIGVAP-TD 170 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCC---HHHHHHHHHHcCchhcccEEEecCcCCCCCCCHHHHHHHHHHhCCCh-hh
Confidence 347788889999999999999999853 344444567777643222222211 11223333344432 34
Q ss_pred EEEecccc-hHHHHHHcCCee
Q 017785 170 VYVVGEDG-ILKELELAGFQY 189 (366)
Q Consensus 170 ~~~~g~~~-~~~~l~~~g~~~ 189 (366)
++++|... -.+..+..|+..
T Consensus 171 ~l~IGDs~~Di~aA~~aG~~~ 191 (229)
T PRK13226 171 CVYVGDDERDILAARAAGMPS 191 (229)
T ss_pred EEEeCCCHHHHHHHHHCCCcE
Confidence 66666542 245556778764
No 234
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=72.22 E-value=44 Score=29.29 Aligned_cols=87 Identities=22% Similarity=0.294 Sum_probs=52.9
Q ss_pred EeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCCCCcCceecc---------HHHHHHHHHhcCCCCCCe
Q 017785 99 KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFAS---------SFAAAAYLKSIDFPKDKK 169 (366)
Q Consensus 99 ~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~~~~~~i~~~---------~~~~~~~l~~~~~~~~~~ 169 (366)
.++|++.+.++.+++.|+++.++||+ ........++.+|+.-..+.++.. .......+...+.. ...
T Consensus 93 ~~~~g~~~~l~~l~~~g~~~~i~S~~---~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~-~~~ 168 (226)
T PRK13222 93 RLYPGVKETLAALKAAGYPLAVVTNK---PTPFVAPLLEALGIADYFSVVIGGDSLPNKKPDPAPLLLACEKLGLD-PEE 168 (226)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCC---CHHHHHHHHHHcCCccCccEEEcCCCCCCCCcChHHHHHHHHHcCCC-hhh
Confidence 36788899999999999999999974 344445566778875333333322 12222334444433 244
Q ss_pred EEEeccc-chHHHHHHcCCee
Q 017785 170 VYVVGED-GILKELELAGFQY 189 (366)
Q Consensus 170 ~~~~g~~-~~~~~l~~~g~~~ 189 (366)
++++|.. .-.+.++..|+..
T Consensus 169 ~i~igD~~~Di~~a~~~g~~~ 189 (226)
T PRK13222 169 MLFVGDSRNDIQAARAAGCPS 189 (226)
T ss_pred eEEECCCHHHHHHHHHCCCcE
Confidence 6666644 3456667777754
No 235
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=71.96 E-value=18 Score=31.32 Aligned_cols=38 Identities=18% Similarity=0.404 Sum_probs=26.6
Q ss_pred HHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH-HhcCC
Q 017785 104 VPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKF-ETLGL 141 (366)
Q Consensus 104 ~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l-~~lG~ 141 (366)
+.+.|.+-++.|-.++|+|..+..-.+...+.| +.+.+
T Consensus 119 A~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i 157 (237)
T COG3700 119 ARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHI 157 (237)
T ss_pred HHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhccc
Confidence 446777778999999999965544445666666 45555
No 236
>COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=71.53 E-value=2.3 Score=41.87 Aligned_cols=46 Identities=22% Similarity=0.177 Sum_probs=42.8
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEE
Q 017785 284 GKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLV 329 (366)
Q Consensus 284 gKP~p~~~~~a~~~lgv~~~~vl~VGDs~~~Di~~a~~aG~~tv~V 329 (366)
.|-+...|..+++.-++++...+.+||+.+.|+.++++.|+.|..-
T Consensus 156 ~KnSg~LFk~Vlk~EnVd~~~w~H~GDN~~aD~l~pk~LgI~Tlf~ 201 (635)
T COG5610 156 KKNSGNLFKAVLKLENVDPKKWIHCGDNWVADYLKPKNLGISTLFY 201 (635)
T ss_pred hcccchHHHHHHhhcCCChhheEEecCchhhhhcCccccchhHHHH
Confidence 7888999999999999999999999999999999999999887753
No 237
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=71.28 E-value=29 Score=30.82 Aligned_cols=48 Identities=35% Similarity=0.460 Sum_probs=37.4
Q ss_pred eCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCCCCcCceec
Q 017785 100 LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFA 150 (366)
Q Consensus 100 ~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~~~~~~i~~ 150 (366)
++|++.+++..|++.|++..++|| ++.......++.+|+...-+.++.
T Consensus 90 ~~~gv~e~L~~L~~~g~~l~i~T~---k~~~~~~~~l~~~gl~~~F~~i~g 137 (220)
T COG0546 90 LFPGVKELLAALKSAGYKLGIVTN---KPERELDILLKALGLADYFDVIVG 137 (220)
T ss_pred cCCCHHHHHHHHHhCCCeEEEEeC---CcHHHHHHHHHHhCCccccceEEc
Confidence 488899999999999999999997 456666666788888655444444
No 238
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=71.02 E-value=37 Score=30.71 Aligned_cols=90 Identities=18% Similarity=0.125 Sum_probs=53.6
Q ss_pred CCEeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCCCC-cCceeccH---------HHHHHHHHhcCCCC
Q 017785 97 GDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVT-EEEIFASS---------FAAAAYLKSIDFPK 166 (366)
Q Consensus 97 ~~~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~~~-~~~i~~~~---------~~~~~~l~~~~~~~ 166 (366)
...++|++.+.|+.|+++|+++.++||+ +.......++.+|+.-. .+.++.+. ......+...+...
T Consensus 97 ~~~~~pg~~e~L~~L~~~g~~l~IvT~~---~~~~~~~~l~~~gl~~~f~d~ii~~~~~~~~KP~p~~~~~a~~~l~~~~ 173 (253)
T TIGR01422 97 YSSPIPGVIEVIAYLRARGIKIGSTTGY---TREMMDVVAPEAALQGYRPDYNVTTDDVPAGRPAPWMALKNAIELGVYD 173 (253)
T ss_pred cCccCCCHHHHHHHHHHCCCeEEEECCC---cHHHHHHHHHHHHhcCCCCceEEccccCCCCCCCHHHHHHHHHHcCCCC
Confidence 3467899999999999999999999973 45555555666666432 23343322 12223344444321
Q ss_pred CCeEEEeccc-chHHHHHHcCCee
Q 017785 167 DKKVYVVGED-GILKELELAGFQY 189 (366)
Q Consensus 167 ~~~~~~~g~~-~~~~~l~~~g~~~ 189 (366)
...++++|.. .-.+..+..|+..
T Consensus 174 ~~~~l~IGDs~~Di~aA~~aGi~~ 197 (253)
T TIGR01422 174 VAACVKVGDTVPDIEEGRNAGMWT 197 (253)
T ss_pred chheEEECCcHHHHHHHHHCCCeE
Confidence 2346666644 2345556677754
No 239
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=70.68 E-value=2 Score=43.58 Aligned_cols=33 Identities=27% Similarity=0.196 Sum_probs=21.6
Q ss_pred HHcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEec
Q 017785 296 NKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLS 331 (366)
Q Consensus 296 ~~lgv~~~~vl~VGDs~~~Di~~a~~aG~~tv~V~~ 331 (366)
+.+|.+... ++.||+. +|..|...++- ..+|..
T Consensus 183 ~~~g~~~~~-~aYgDS~-sD~plL~~a~e-~y~V~~ 215 (497)
T PLN02177 183 KEFGDALPD-LGLGDRE-TDHDFMSICKE-GYMVPR 215 (497)
T ss_pred HHhCCCCce-EEEECCc-cHHHHHHhCCc-cEEeCC
Confidence 445644444 7888886 88888888873 344444
No 240
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=69.89 E-value=19 Score=32.25 Aligned_cols=88 Identities=18% Similarity=0.197 Sum_probs=48.9
Q ss_pred CEeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhc---CCCCCcCceec-------cHHHHHHHHHhcCCCCC
Q 017785 98 DKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETL---GLTVTEEEIFA-------SSFAAAAYLKSIDFPKD 167 (366)
Q Consensus 98 ~~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~l---G~~~~~~~i~~-------~~~~~~~~l~~~~~~~~ 167 (366)
..++|++.++|+.|+++|+++.++||.+ .......++.. ++.-.-+.++. ........+.+.+...
T Consensus 94 ~~lypgv~e~L~~Lk~~G~~l~I~Sn~s---~~~~~~~~~~~~~~~L~~~f~~~fd~~~g~KP~p~~y~~i~~~lgv~p- 169 (220)
T TIGR01691 94 SHLYPDVPPALEAWLQLGLRLAVYSSGS---VPAQKLLFGHSDAGNLTPYFSGYFDTTVGLKTEAQSYVKIAGQLGSPP- 169 (220)
T ss_pred cCcCcCHHHHHHHHHHCCCEEEEEeCCC---HHHHHHHHhhccccchhhhcceEEEeCcccCCCHHHHHHHHHHhCcCh-
Confidence 3579999999999999999999999843 33222233332 22110111111 1122233344444433
Q ss_pred CeEEEeccc-chHHHHHHcCCee
Q 017785 168 KKVYVVGED-GILKELELAGFQY 189 (366)
Q Consensus 168 ~~~~~~g~~-~~~~~l~~~g~~~ 189 (366)
..++++|.. .-++..+..|+..
T Consensus 170 ~e~lfVgDs~~Di~AA~~AG~~t 192 (220)
T TIGR01691 170 REILFLSDIINELDAARKAGLHT 192 (220)
T ss_pred hHEEEEeCCHHHHHHHHHcCCEE
Confidence 346666644 3356667788865
No 241
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=66.40 E-value=62 Score=29.57 Aligned_cols=88 Identities=16% Similarity=0.120 Sum_probs=50.3
Q ss_pred EeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCCCC-cCceeccH---------HHHHHHHHhcCCCCCC
Q 017785 99 KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVT-EEEIFASS---------FAAAAYLKSIDFPKDK 168 (366)
Q Consensus 99 ~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~~~-~~~i~~~~---------~~~~~~l~~~~~~~~~ 168 (366)
.++|++.+.|+.|+++|+++.++||. +.......++.+|+.-. .+.++.+. ......+...+.....
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~---~~~~~~~~l~~~~l~~~~~d~i~~~~~~~~~KP~p~~~~~a~~~l~~~~~~ 177 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGY---TREMMDVVVPLAAAQGYRPDHVVTTDDVPAGRPYPWMALKNAIELGVYDVA 177 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCC---cHHHHHHHHHHHhhcCCCceEEEcCCcCCCCCCChHHHHHHHHHcCCCCCc
Confidence 56899999999999999999999974 34444444555443211 12333221 2223334444442223
Q ss_pred eEEEeccc-chHHHHHHcCCee
Q 017785 169 KVYVVGED-GILKELELAGFQY 189 (366)
Q Consensus 169 ~~~~~g~~-~~~~~l~~~g~~~ 189 (366)
.++++|.. .-.+..+..|+..
T Consensus 178 e~l~IGDs~~Di~aA~~aG~~~ 199 (267)
T PRK13478 178 ACVKVDDTVPGIEEGLNAGMWT 199 (267)
T ss_pred ceEEEcCcHHHHHHHHHCCCEE
Confidence 46666643 2355556677754
No 242
>KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=66.20 E-value=35 Score=32.76 Aligned_cols=41 Identities=17% Similarity=0.229 Sum_probs=33.8
Q ss_pred HHHHHcCCCCCcEEEEcCCchhhHHHHH-HcCCcEEEEecCC
Q 017785 293 YLANKFGIQKSQICMVGDRLDTDILFGQ-NGGCKTLLVLSGV 333 (366)
Q Consensus 293 ~a~~~lgv~~~~vl~VGDs~~~Di~~a~-~aG~~tv~V~~G~ 333 (366)
..++.-|..-.++++|||.+..|+.... ++|++|-.|-...
T Consensus 337 ~flelt~WrG~~VlYFGDHlySDLad~tlkhgWRTgAII~EL 378 (510)
T KOG2470|consen 337 SFLELTGWRGPRVLYFGDHLYSDLADLTLKHGWRTGAIIPEL 378 (510)
T ss_pred HHHHHhccCCCeeEEecCcchhhhhhhHhhcccccccchHHH
Confidence 3566668888999999999999999888 9999988765543
No 243
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=66.11 E-value=27 Score=30.48 Aligned_cols=30 Identities=30% Similarity=0.386 Sum_probs=25.9
Q ss_pred CEeCCCHHHHHHHHHHCCCeEEEEeCCCCC
Q 017785 98 DKLIDGVPETLDMLRSKGKRLVFVTNNSTK 127 (366)
Q Consensus 98 ~~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~ 127 (366)
-.++|++.+.++.|+++|+++.++||+...
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~ 122 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPT 122 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCc
Confidence 457899999999999999999999996543
No 244
>PLN02940 riboflavin kinase
Probab=65.80 E-value=42 Score=32.81 Aligned_cols=86 Identities=15% Similarity=0.195 Sum_probs=51.8
Q ss_pred eCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHH-hcCCCCCcCceeccH---------HHHHHHHHhcCCCCCCe
Q 017785 100 LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFE-TLGLTVTEEEIFASS---------FAAAAYLKSIDFPKDKK 169 (366)
Q Consensus 100 ~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~-~lG~~~~~~~i~~~~---------~~~~~~l~~~~~~~~~~ 169 (366)
++|++.+.|+.|+++|+++.++||+ ++..+...++ ..|+.-.-+.++.+. ......++..+... ..
T Consensus 94 l~pGv~elL~~Lk~~g~~l~IvTn~---~~~~~~~~l~~~~gl~~~Fd~ii~~d~v~~~KP~p~~~~~a~~~lgv~p-~~ 169 (382)
T PLN02940 94 ALPGANRLIKHLKSHGVPMALASNS---PRANIEAKISCHQGWKESFSVIVGGDEVEKGKPSPDIFLEAAKRLNVEP-SN 169 (382)
T ss_pred CCcCHHHHHHHHHHCCCcEEEEeCC---cHHHHHHHHHhccChHhhCCEEEehhhcCCCCCCHHHHHHHHHHcCCCh-hH
Confidence 4678888999999999999999984 3444444554 566643333443332 12233344444433 34
Q ss_pred EEEeccc-chHHHHHHcCCee
Q 017785 170 VYVVGED-GILKELELAGFQY 189 (366)
Q Consensus 170 ~~~~g~~-~~~~~l~~~g~~~ 189 (366)
++++|.. .-++..+..|+..
T Consensus 170 ~l~VGDs~~Di~aA~~aGi~~ 190 (382)
T PLN02940 170 CLVIEDSLPGVMAGKAAGMEV 190 (382)
T ss_pred EEEEeCCHHHHHHHHHcCCEE
Confidence 5666643 3356667888865
No 245
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=65.70 E-value=49 Score=30.55 Aligned_cols=86 Identities=20% Similarity=0.284 Sum_probs=50.0
Q ss_pred eCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCCCCcCceeccH---------HHHHHHHHhcCCCCCCeE
Q 017785 100 LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASS---------FAAAAYLKSIDFPKDKKV 170 (366)
Q Consensus 100 ~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~~~~~~i~~~~---------~~~~~~l~~~~~~~~~~~ 170 (366)
++|++.+.|+.|++.|+++.++||+ +.......++.+|+.-.-+.++.+. ......+...++.. ..+
T Consensus 102 ~~~g~~e~L~~Lk~~g~~l~ivTn~---~~~~~~~~l~~~~i~~~f~~i~~~d~~~~~Kp~p~~~~~~~~~~g~~~-~~~ 177 (272)
T PRK13223 102 VYPGVRDTLKWLKKQGVEMALITNK---PERFVAPLLDQMKIGRYFRWIIGGDTLPQKKPDPAALLFVMKMAGVPP-SQS 177 (272)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEECC---cHHHHHHHHHHcCcHhhCeEEEecCCCCCCCCCcHHHHHHHHHhCCCh-hHE
Confidence 4677888999999999999999974 3344444556677642222222211 12223344444432 345
Q ss_pred EEeccc-chHHHHHHcCCee
Q 017785 171 YVVGED-GILKELELAGFQY 189 (366)
Q Consensus 171 ~~~g~~-~~~~~l~~~g~~~ 189 (366)
+++|.. .-++..+..|+..
T Consensus 178 l~IGD~~~Di~aA~~aGi~~ 197 (272)
T PRK13223 178 LFVGDSRSDVLAAKAAGVQC 197 (272)
T ss_pred EEECCCHHHHHHHHHCCCeE
Confidence 666654 3356667778754
No 246
>PF01740 STAS: STAS domain; InterPro: IPR002645 The STAS (Sulphate Transporter and AntiSigma factor antagonist) domain is found in the C-terminal region of sulphate transporters and bacterial anti-sigma factor antagonists. It has been suggested that this domain may have a general NTP binding function. The establishment of differential gene expression in sporulating Bacillus subtilis involves four protein components one of which is SpoIIAA (P10727 from SWISSPROT). The four components regulate the sporulation sigma factor F. Early in sporulation, SpoIIAA is in the phosphorylated state (SpoIIAA-P), as a result of the activity of the ATP-dependent protein kinase SpoIIAB (P10728 from SWISSPROT). The site at which this protein is a conserved serine. SpoIIAB is an anti-sigma factor that in its free form inhibits F by binding to it. Competition by SpoIIAA (the anti-anti-sigma factor) for binding to SpoIIAB releases Sigma F activity []. The STAS domain is found in the anti-sigma factor antagonist SpoIIAA.; PDB: 3T6O_B 3LKL_B 1H4Z_A 1H4Y_B 1H4X_B 3NY7_A 3OIZ_A 1T6R_A 1VC1_B 1SBO_A ....
Probab=65.05 E-value=7.8 Score=30.51 Aligned_cols=56 Identities=25% Similarity=0.424 Sum_probs=41.5
Q ss_pred cCcEEEEecceeEEeCCEeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCC
Q 017785 82 SVETFIFDCDGVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT 142 (366)
Q Consensus 82 ~ik~viFDiDGTL~d~~~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~ 142 (366)
.++.|++||.++-.=....+....+..+.++.+|+.+.++. ....+.+.|+..|+.
T Consensus 47 ~~~~vIlD~s~v~~iDssgi~~L~~~~~~~~~~g~~~~l~~-----~~~~v~~~l~~~~~~ 102 (117)
T PF01740_consen 47 TIKNVILDMSGVSFIDSSGIQALVDIIKELRRRGVQLVLVG-----LNPDVRRILERSGLI 102 (117)
T ss_dssp SSSEEEEEETTESEESHHHHHHHHHHHHHHHHTTCEEEEES-----HHHHHHHHHHHTTGH
T ss_pred cceEEEEEEEeCCcCCHHHHHHHHHHHHHHHHCCCEEEEEE-----CCHHHHHHHHHcCCC
Confidence 36899999999875333233335577788889999998887 567777778888874
No 247
>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3.1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm
Probab=62.64 E-value=56 Score=30.11 Aligned_cols=69 Identities=19% Similarity=0.304 Sum_probs=46.7
Q ss_pred CCeEEEEeCCCCCCHHHHHHHHHhcCCCCCcCceeccHHHHHHHHHhcCCCCCCeEEEecccchHHHHHHcCCe
Q 017785 115 GKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQ 188 (366)
Q Consensus 115 g~~~~~~Tn~sg~~~~~~~~~l~~lG~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~g~~ 188 (366)
-+.++++++|+..+---+.+-++..|++++. .+++++.....|+...+.. .++-..++-.+.....|+.
T Consensus 36 ~VEVVllSRNspdTGlRv~nSI~hygL~ItR-~~ft~G~~~~~Yl~af~v~----LFLSan~~DV~~Ai~~G~~ 104 (264)
T PF06189_consen 36 LVEVVLLSRNSPDTGLRVFNSIRHYGLDITR-AAFTGGESPYPYLKAFNVD----LFLSANEDDVQEAIDAGIP 104 (264)
T ss_pred ceEEEEEecCCHHHHHHHHHhHHHhCCccee-eeecCCCCHHHHHHHhCCc----eEeeCCHHHHHHHHHcCCC
Confidence 3467888888766666677777889999875 4677777777899877542 3444444445555566763
No 248
>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]
Probab=62.27 E-value=34 Score=27.90 Aligned_cols=57 Identities=16% Similarity=0.064 Sum_probs=40.8
Q ss_pred EEEEecceeEEeC----------CEeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCCC
Q 017785 85 TFIFDCDGVIWKG----------DKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTV 143 (366)
Q Consensus 85 ~viFDiDGTL~d~----------~~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~~ 143 (366)
.|-||+|++++-. ...+++...-|..|+++|+....+++ +..++...+.|+.+.+..
T Consensus 20 ~vdthl~~pfkP~k~~~g~~g~e~~fY~Di~rIL~dLk~~GVtl~~ASR--t~ap~iA~q~L~~fkvk~ 86 (144)
T KOG4549|consen 20 LVDTHLDYPFKPFKCECGSKGEEMIFYDDIRRILVDLKKLGVTLIHASR--TMAPQIASQGLETFKVKQ 86 (144)
T ss_pred EEEecccccccccccCcccCcceeeeccchhHHHHHHHhcCcEEEEecC--CCCHHHHHHHHHHhccCc
Confidence 4555666666531 24478888899999999999999997 566666666677776643
No 249
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=59.84 E-value=43 Score=29.06 Aligned_cols=27 Identities=30% Similarity=0.468 Sum_probs=24.3
Q ss_pred EeCCCHHHHHHHHHHCCCeEEEEeCCC
Q 017785 99 KLIDGVPETLDMLRSKGKRLVFVTNNS 125 (366)
Q Consensus 99 ~~~~~~~~ai~~l~~~g~~~~~~Tn~s 125 (366)
.++|++.+.++.+++.|+++.++||+.
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~ 110 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTN 110 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCc
Confidence 468899999999999999999999954
No 250
>PLN02954 phosphoserine phosphatase
Probab=59.46 E-value=20 Score=31.62 Aligned_cols=64 Identities=27% Similarity=0.463 Sum_probs=49.8
Q ss_pred HHHHhccCcEEEEecceeEEeCC--------------------------------------------------------E
Q 017785 76 ADELIDSVETFIFDCDGVIWKGD--------------------------------------------------------K 99 (366)
Q Consensus 76 ~~~~~~~ik~viFDiDGTL~d~~--------------------------------------------------------~ 99 (366)
..++...+|+|+||+||||+|++ .
T Consensus 5 ~~~~~~~~k~viFDfDGTL~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (224)
T PLN02954 5 VLELWRSADAVCFDVDSTVCVDEGIDELAEFCGAGEAVAEWTAKAMGGSVPFEEALAARLSLFKPSLSQVEEFLEKRPPR 84 (224)
T ss_pred HHHHHccCCEEEEeCCCcccchHHHHHHHHHcCChHHHHHHHHHHHCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHccCC
Confidence 34566779999999999999853 2
Q ss_pred eCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCC
Q 017785 100 LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT 142 (366)
Q Consensus 100 ~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~ 142 (366)
+.|++.+.++.++++|+++.++|++ ....+...++.+|++
T Consensus 85 l~pg~~e~l~~l~~~g~~~~IvS~~---~~~~i~~~l~~~gi~ 124 (224)
T PLN02954 85 LSPGIPELVKKLRARGTDVYLVSGG---FRQMIAPVAAILGIP 124 (224)
T ss_pred CCccHHHHHHHHHHCCCEEEEECCC---cHHHHHHHHHHhCCC
Confidence 4678889999999999999999963 444555556788875
No 251
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=59.31 E-value=25 Score=30.48 Aligned_cols=48 Identities=23% Similarity=0.152 Sum_probs=36.0
Q ss_pred eCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCCCCcCceec
Q 017785 100 LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFA 150 (366)
Q Consensus 100 ~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~~~~~~i~~ 150 (366)
..+.+.+.|+.|++.|+++.++|| .+.......++.+|+.-..+.++.
T Consensus 107 ~~~~~~~~L~~l~~~g~~~~i~T~---~~~~~~~~~l~~~gl~~~f~~~~~ 154 (197)
T TIGR01548 107 TLLTPKGLLRELHRAPKGMAVVTG---RPRKDAAKFLTTHGLEILFPVQIW 154 (197)
T ss_pred cccCHHHHHHHHHHcCCcEEEECC---CCHHHHHHHHHHcCchhhCCEEEe
Confidence 455678999999999999999997 356666667788998644444444
No 252
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=59.19 E-value=69 Score=27.94 Aligned_cols=87 Identities=29% Similarity=0.362 Sum_probs=55.6
Q ss_pred CEeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCCCCcCceeccH---------HHHHHHHHhc-CCCCC
Q 017785 98 DKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASS---------FAAAAYLKSI-DFPKD 167 (366)
Q Consensus 98 ~~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~~~~~~i~~~~---------~~~~~~l~~~-~~~~~ 167 (366)
.+++|++.+.|+.+++. +++.++||+ +...+...++.+|+...-+.++.+. ..+...+... +...
T Consensus 96 ~~~~~g~~~~L~~l~~~-~~~~i~Sn~---~~~~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~- 170 (224)
T TIGR02254 96 HQLLPGAFELMENLQQK-FRLYIVTNG---VRETQYKRLRKSGLFPFFDDIFVSEDAGIQKPDKEIFNYALERMPKFSK- 170 (224)
T ss_pred CeeCccHHHHHHHHHhc-CcEEEEeCC---chHHHHHHHHHCCcHhhcCEEEEcCccCCCCCCHHHHHHHHHHhcCCCc-
Confidence 46789999999999999 999999984 3455555678888854334444332 1223334444 4332
Q ss_pred CeEEEecccc--hHHHHHHcCCee
Q 017785 168 KKVYVVGEDG--ILKELELAGFQY 189 (366)
Q Consensus 168 ~~~~~~g~~~--~~~~l~~~g~~~ 189 (366)
..++++|... -....+..|++.
T Consensus 171 ~~~v~igD~~~~di~~A~~~G~~~ 194 (224)
T TIGR02254 171 EEVLMIGDSLTADIKGGQNAGLDT 194 (224)
T ss_pred hheEEECCCcHHHHHHHHHCCCcE
Confidence 3467777542 456667778754
No 253
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=58.29 E-value=1.4e+02 Score=32.35 Aligned_cols=44 Identities=16% Similarity=0.352 Sum_probs=31.5
Q ss_pred CEeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCCCC
Q 017785 98 DKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVT 144 (366)
Q Consensus 98 ~~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~~~ 144 (366)
+.+-+++.++++.+++.|+++..+|+. +........++.|+.-.
T Consensus 583 DPPR~ev~~ai~~c~~aGIrV~mITGD---~~~TA~AI~r~iGi~~~ 626 (972)
T KOG0202|consen 583 DPPRPEVADAIELCRQAGIRVIMITGD---NKETAEAIAREIGIFSE 626 (972)
T ss_pred CCCchhHHHHHHHHHHcCCEEEEEcCC---CHHHHHHHHHHhCCCcC
Confidence 445677999999999999999999953 33333333477776443
No 254
>TIGR01658 EYA-cons_domain eyes absent protein conserved domain. This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences.
Probab=57.46 E-value=27 Score=31.89 Aligned_cols=48 Identities=21% Similarity=0.331 Sum_probs=42.0
Q ss_pred cCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEecCC
Q 017785 283 VGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGV 333 (366)
Q Consensus 283 ~gKP~p~~~~~a~~~lgv~~~~vl~VGDs~~~Di~~a~~aG~~tv~V~~G~ 333 (366)
.|| ...|+.+.+++|-+.-.-++|||.. .--++|+..+++.+-|....
T Consensus 213 vGK--~~cFe~I~~Rfg~p~~~f~~IGDG~-eEe~aAk~l~wPFw~I~~h~ 260 (274)
T TIGR01658 213 VGK--LQCFKWIKERFGHPKVRFCAIGDGW-EECTAAQAMNWPFVKIDLHP 260 (274)
T ss_pred cch--HHHHHHHHHHhCCCCceEEEeCCCh-hHHHHHHhcCCCeEEeecCC
Confidence 465 7889999999999889999999997 88899999999999877654
No 255
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=56.79 E-value=23 Score=32.23 Aligned_cols=75 Identities=15% Similarity=0.267 Sum_probs=50.3
Q ss_pred ccCCCccHHHHhccC-c-EEEEecceeEEeCCEe---------------------------------CCC--HHHHHHHH
Q 017785 69 SAQPLKNADELIDSV-E-TFIFDCDGVIWKGDKL---------------------------------IDG--VPETLDML 111 (366)
Q Consensus 69 ~~~~~~~~~~~~~~i-k-~viFDiDGTL~d~~~~---------------------------------~~~--~~~ai~~l 111 (366)
.+-+.+.+.+-+..- + +|+||+||||+|+... .|. +.+.|+.+
T Consensus 47 ~~~~~~~~~~~~~~~~p~aViFDlDgTLlDSs~~~~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~l 126 (237)
T TIGR01672 47 HWISVAQIENSLEGRPPIAVSFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMH 126 (237)
T ss_pred eEEEHHHHHHhcCCCCCeEEEEeCCCccccCcHHHhCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHHH
Confidence 344444454433333 3 9999999999996531 222 67889999
Q ss_pred HHCCCeEEEEeCCCCCCHHHHHHHH-HhcCCCC
Q 017785 112 RSKGKRLVFVTNNSTKSRKQYGKKF-ETLGLTV 143 (366)
Q Consensus 112 ~~~g~~~~~~Tn~sg~~~~~~~~~l-~~lG~~~ 143 (366)
+++|++++++||..........+.+ +.+|++.
T Consensus 127 ~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~ 159 (237)
T TIGR01672 127 QRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPA 159 (237)
T ss_pred HHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCch
Confidence 9999999999985433244455554 6789853
No 256
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=56.15 E-value=87 Score=27.88 Aligned_cols=53 Identities=28% Similarity=0.402 Sum_probs=39.1
Q ss_pred eCCEeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCCCCcCceecc
Q 017785 96 KGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFAS 151 (366)
Q Consensus 96 d~~~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~~~~~~i~~~ 151 (366)
++..++|++.+.++.|+++|+.+..+|+ .++..+...+..+|+.-..+.++++
T Consensus 83 ~~~~~~pGv~~~l~~L~~~~i~~avaS~---s~~~~~~~~L~~~gl~~~f~~~v~~ 135 (221)
T COG0637 83 EGLKPIPGVVELLEQLKARGIPLAVASS---SPRRAAERVLARLGLLDYFDVIVTA 135 (221)
T ss_pred cCCCCCccHHHHHHHHHhcCCcEEEecC---ChHHHHHHHHHHccChhhcchhccH
Confidence 4557899999999999999999999996 3445555566788876444444443
No 257
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=55.13 E-value=1.9e+02 Score=29.57 Aligned_cols=178 Identities=15% Similarity=0.185 Sum_probs=0.0
Q ss_pred cCcEEEEecceeEEeCCEe------CCC-HHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCCCCcCceeccHHH
Q 017785 82 SVETFIFDCDGVIWKGDKL------IDG-VPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFA 154 (366)
Q Consensus 82 ~ik~viFDiDGTL~d~~~~------~~~-~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~~~~~~i~~~~~~ 154 (366)
.++..+.|--||+.-+++. .++ ..+.+......---..-... |+|.-.++ ++++++++.+.... +..
T Consensus 298 DvdtliLDKTGTIT~GnR~A~~f~p~~gv~~~~la~aa~lsSl~DeTpE--GrSIV~LA---~~~~~~~~~~~~~~-~~~ 371 (681)
T COG2216 298 DVDTLLLDKTGTITLGNRQASEFIPVPGVSEEELADAAQLASLADETPE--GRSIVELA---KKLGIELREDDLQS-HAE 371 (681)
T ss_pred CccEEEecccCceeecchhhhheecCCCCCHHHHHHHHHHhhhccCCCC--cccHHHHH---HHhccCCCcccccc-cce
Q ss_pred HHHHHHhcC-----CCCCCeEEEecccchHHHHHHcCCeeeCCCCCCCcccccCCCcccCCCCCccEEEEEccCCCCHHh
Q 017785 155 AAAYLKSID-----FPKDKKVYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYK 229 (366)
Q Consensus 155 ~~~~l~~~~-----~~~~~~~~~~g~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~y~~ 229 (366)
...+-.+.. ++.+..+.--..+.+.+..++.|-++ -++
T Consensus 372 fvpFtA~TRmSGvd~~~~~~irKGA~dai~~~v~~~~g~~-------------------------------------p~~ 414 (681)
T COG2216 372 FVPFTAQTRMSGVDLPGGREIRKGAVDAIRRYVRERGGHI-------------------------------------PED 414 (681)
T ss_pred eeecceecccccccCCCCceeecccHHHHHHHHHhcCCCC-------------------------------------CHH
Q ss_pred HHHHHHHHHcCCCcEEEEecCCceeecCCCccccCCCccceeeeeeecCcccccCCCcHHHHHHHHHHcCCCCCcEEEEc
Q 017785 230 VQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVG 309 (366)
Q Consensus 230 l~~a~~~l~~~~g~~~i~sn~d~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~gKP~p~~~~~a~~~lgv~~~~vl~VG 309 (366)
+......+....|.++.+...+.+.-.-.-+-. -||--.=--.=++++|++ .+++-|
T Consensus 415 l~~~~~~vs~~GGTPL~V~~~~~~~GVI~LkDi---------------------vK~Gi~ERf~elR~MgIk--TvM~TG 471 (681)
T COG2216 415 LDAAVDEVSRLGGTPLVVVENGRILGVIYLKDI---------------------VKPGIKERFAELRKMGIK--TVMITG 471 (681)
T ss_pred HHHHHHHHHhcCCCceEEEECCEEEEEEEehhh---------------------cchhHHHHHHHHHhcCCe--EEEEeC
Q ss_pred CCchhhHHHHHHcCCc
Q 017785 310 DRLDTDILFGQNGGCK 325 (366)
Q Consensus 310 Ds~~~Di~~a~~aG~~ 325 (366)
|++.+--.-|+.+|++
T Consensus 472 DN~~TAa~IA~EAGVD 487 (681)
T COG2216 472 DNPLTAAAIAAEAGVD 487 (681)
T ss_pred CCHHHHHHHHHHhCch
No 258
>cd07043 STAS_anti-anti-sigma_factors Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation. Anti-anti-sigma factors play an important role in the regulation of several sigma factors and their corresponding anti-sigma factors. Upon dephosphorylation they bind the anti-sigma factor and induce the release of the sigma factor from the anti-sigma factor. In a feedback mechanism the anti-anti-sigma factor can be inactivated via phosphorylation by the anti-sigma factor. Well studied examples from Bacillus subtilis are SpoIIAA (regulating sigmaF and sigmaC which play an important role in sporulation) and RsbV (regulating sigmaB involved in the general stress response). The STAS domain is also found in the C- terminal region of sulphate transporters and stressosomes.
Probab=53.05 E-value=31 Score=25.69 Aligned_cols=54 Identities=22% Similarity=0.362 Sum_probs=38.2
Q ss_pred CcEEEEecceeEE-eCCEeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCC
Q 017785 83 VETFIFDCDGVIW-KGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT 142 (366)
Q Consensus 83 ik~viFDiDGTL~-d~~~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~ 142 (366)
.+.+++|+.++=. |+.. +....+..+.+++.|..+.+.. ....+.+.++.+|+.
T Consensus 38 ~~~viid~~~v~~iDs~g-~~~L~~l~~~~~~~g~~v~i~~-----~~~~~~~~l~~~gl~ 92 (99)
T cd07043 38 PRRLVLDLSGVTFIDSSG-LGVLLGAYKRARAAGGRLVLVN-----VSPAVRRVLELTGLD 92 (99)
T ss_pred CCEEEEECCCCCEEcchh-HHHHHHHHHHHHHcCCeEEEEc-----CCHHHHHHHHHhCcc
Confidence 6899999999764 4443 3335577788888998877765 235777777777763
No 259
>TIGR00377 ant_ant_sig anti-anti-sigma factor. This superfamily includes small (105-125 residue) proteins related to SpoIIAA of Bacillus subtilis, an anti-anti-sigma factor. SpoIIAA can bind to and inhibit the anti-sigma F factor SpoIIAB. Also, it can be phosphorylated by SpoIIAB on a Ser residue at position 59 of the seed alignment. A similar arrangement is inferred for RsbV, an anti-anti-sigma factor for sigma B. This Ser is fairly well conserved within a motif resembling MXS[STA]G[VIL]X[VIL][VILF] among homologous known or predicted anti-anti-sigma factors. Regions similar to SpoIIAA and apparently homologous, but differing considerably near the phosphorlated Ser of SpoIIAA, appear in a single copy in several longer proteins.
Probab=52.93 E-value=37 Score=25.98 Aligned_cols=54 Identities=15% Similarity=0.315 Sum_probs=38.6
Q ss_pred cCcEEEEecceeEE-eCCEeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCC
Q 017785 82 SVETFIFDCDGVIW-KGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGL 141 (366)
Q Consensus 82 ~ik~viFDiDGTL~-d~~~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~ 141 (366)
..+.+++|+.++=. |+.. +....+..+.++++|..+.++. ....+.+.++..|+
T Consensus 42 ~~~~vvidls~v~~iDssg-l~~L~~~~~~~~~~~~~~~l~~-----~~~~~~~~l~~~~l 96 (108)
T TIGR00377 42 GPRPIVLDLEDLEFMDSSG-LGVLLGRYKQVRRVGGQLVLVS-----VSPRVARLLDITGL 96 (108)
T ss_pred CCCeEEEECCCCeEEcccc-HHHHHHHHHHHHhcCCEEEEEe-----CCHHHHHHHHHhCh
Confidence 68899999999875 5543 3334567778888999888777 34566666666666
No 260
>cd07041 STAS_RsbR_RsbS_like Sulphate Transporter and Anti-Sigma factor antagonist domain of the "stressosome" complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation. The STAS (Sulphate Transporter and Anti-Sigma factor antagonist) domain of proteins related to RsbS and RsbR which are part of the "stressosome" complex that plays an important role in the regulation of the bacterial stress activated alternative sigma factor sigma-B. During stress conditions RsbS and RsbR are phosphorylated which leads to the release of RsbT, an activator of of the RsbU phosphatase, which in turn activates RsbV which leads to the release and activation of sigma factor B. RsbS is a single domain protein (STAS domain), while RsbR-like proteins have a well-conserved C-terminal STATS domain and a variable N-terminal domain. The STAS domain is also found in the C- terminal region of sulphate transporters and anti-anti-sigma factors.
Probab=51.55 E-value=35 Score=26.35 Aligned_cols=57 Identities=19% Similarity=0.254 Sum_probs=41.6
Q ss_pred ccCcEEEEecceeEE-eCCEeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCCC
Q 017785 81 DSVETFIFDCDGVIW-KGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTV 143 (366)
Q Consensus 81 ~~ik~viFDiDGTL~-d~~~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~~ 143 (366)
...+.+++|+-|+=+ |+.. +....+..+.++..|..+.++. ....+.+.|+..|+..
T Consensus 39 ~~~~~vvlDls~v~~iDssg-~~~l~~~~~~~~~~g~~l~l~g-----~~~~v~~~l~~~gl~~ 96 (109)
T cd07041 39 RRARGVIIDLTGVPVIDSAV-ARHLLRLARALRLLGARTILTG-----IRPEVAQTLVELGIDL 96 (109)
T ss_pred cCCCEEEEECCCCchhcHHH-HHHHHHHHHHHHHcCCeEEEEe-----CCHHHHHHHHHhCCCh
Confidence 357899999999875 5543 3335577788889999998887 3466777778888754
No 261
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=50.86 E-value=33 Score=30.51 Aligned_cols=42 Identities=21% Similarity=0.405 Sum_probs=34.8
Q ss_pred EeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH-HhcCCCCC
Q 017785 99 KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKF-ETLGLTVT 144 (366)
Q Consensus 99 ~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l-~~lG~~~~ 144 (366)
.+.|++.+.++.+++.|..++++|. +...+.+.+ +.+|++..
T Consensus 77 ~l~~ga~elv~~lk~~G~~v~iiSg----g~~~lv~~ia~~lg~d~~ 119 (212)
T COG0560 77 RLTPGAEELVAALKAAGAKVVIISG----GFTFLVEPIAERLGIDYV 119 (212)
T ss_pred cCCccHHHHHHHHHHCCCEEEEEcC----ChHHHHHHHHHHhCCchh
Confidence 4588899999999999999999995 566777777 88999643
No 262
>PLN02499 glycerol-3-phosphate acyltransferase
Probab=50.85 E-value=8.4 Score=38.79 Aligned_cols=21 Identities=10% Similarity=0.153 Sum_probs=16.7
Q ss_pred CcEEEEecceeEEeCCEeCCC
Q 017785 83 VETFIFDCDGVIWKGDKLIDG 103 (366)
Q Consensus 83 ik~viFDiDGTL~d~~~~~~~ 103 (366)
.+.++||+||||+.+....|.
T Consensus 8 ~~~~~fD~DGTLlrs~ssFpy 28 (498)
T PLN02499 8 SYSVVSELEGTLLKDADPFSY 28 (498)
T ss_pred cceEEEecccceecCCCccHH
Confidence 457999999999997665554
No 263
>cd00733 GlyRS_alpha_core Class II Glycyl-tRNA synthetase (GlyRS) alpha subunit core catalytic domain. GlyRS functions as a homodimer in eukaryotes, archaea and some bacteria and as a heterotetramer in the remainder of prokaryotes and in arabidopsis. It is responsible for the attachment of glycine to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for the ATP-dependent formation of the enzyme bound aminoacyl-adenylate. This alignment contains only sequences from the GlyRS form which heterotetramerizes. The homodimer form of GlyRS is in a different family of class II aaRS. Class II assignment is based upon structure and the presence of three characteristic sequence motifs.
Probab=50.68 E-value=15 Score=33.41 Aligned_cols=43 Identities=23% Similarity=0.186 Sum_probs=35.7
Q ss_pred CCCcH----HHHHHHHHHcCCCC--CcEEEEcCCchhhHHHHHHcCCcE
Q 017785 284 GKPST----FMMDYLANKFGIQK--SQICMVGDRLDTDILFGQNGGCKT 326 (366)
Q Consensus 284 gKP~p----~~~~~a~~~lgv~~--~~vl~VGDs~~~Di~~a~~aG~~t 326 (366)
-||+| ++|+.-++.+|++| +++-+|+|+-++-..+|--.|+-+
T Consensus 80 iKPsP~niQelYL~SL~~lGid~~~hDIRFVEDnWEsPTLGAwGLGWEV 128 (279)
T cd00733 80 IKPSPDNIQELYLESLEALGINPKEHDIRFVEDNWESPTLGAWGLGWEV 128 (279)
T ss_pred ECCCCccHHHHHHHHHHHhCCCccccCeeEeecCCCCCcccccccccEE
Confidence 57777 66888899999976 689999999989888888888543
No 264
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=50.19 E-value=15 Score=38.37 Aligned_cols=52 Identities=19% Similarity=0.290 Sum_probs=36.3
Q ss_pred CCcEEEEcCCchhhHHHHHHcCCcEEEEecCCCCcccccCCCCCCCCCEEECChhHHHHHH
Q 017785 302 KSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLK 362 (366)
Q Consensus 302 ~~~vl~VGDs~~~Di~~a~~aG~~tv~V~~G~~~~~~l~~~~~~~~pd~v~~sl~~l~~~~ 362 (366)
..++++|||.- ||+.|.+.|.. .|+|-...++...+ .+||.+..+..+-.++
T Consensus 781 ~krvc~IGDGG-NDVsMIq~A~~-GiGI~gkEGkQASL-------AADfSItqF~Hv~rLL 832 (1051)
T KOG0210|consen 781 GKRVCAIGDGG-NDVSMIQAADV-GIGIVGKEGKQASL-------AADFSITQFSHVSRLL 832 (1051)
T ss_pred CceEEEEcCCC-ccchheeeccc-ceeeecccccccch-------hccccHHHHHHHHHHh
Confidence 36899999997 99999998763 34444444444444 4799988777665443
No 265
>PLN02811 hydrolase
Probab=50.13 E-value=98 Score=27.26 Aligned_cols=28 Identities=21% Similarity=0.376 Sum_probs=24.9
Q ss_pred CCEeCCCHHHHHHHHHHCCCeEEEEeCC
Q 017785 97 GDKLIDGVPETLDMLRSKGKRLVFVTNN 124 (366)
Q Consensus 97 ~~~~~~~~~~ai~~l~~~g~~~~~~Tn~ 124 (366)
...++|++.+.|+.|++.|+++.++||.
T Consensus 76 ~~~l~~gv~e~l~~L~~~g~~~~i~S~~ 103 (220)
T PLN02811 76 TSDLMPGAERLVRHLHAKGIPIAIATGS 103 (220)
T ss_pred hCCCCccHHHHHHHHHHCCCcEEEEeCC
Confidence 3457899999999999999999999974
No 266
>TIGR02886 spore_II_AA anti-sigma F factor antagonist. The anti-sigma F factor antagonist, also called stage II sporulation protein AA, is a protein universal among endospore-forming bacteria, all of which belong to the Firmcutes
Probab=49.47 E-value=39 Score=25.94 Aligned_cols=55 Identities=15% Similarity=0.313 Sum_probs=40.3
Q ss_pred cCcEEEEecceeEE-eCCEeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCC
Q 017785 82 SVETFIFDCDGVIW-KGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT 142 (366)
Q Consensus 82 ~ik~viFDiDGTL~-d~~~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~ 142 (366)
..+.+++|+-|+=+ |+..+ ....+..+.++++|..+.++. ....+.+.|+..|+.
T Consensus 38 ~~~~vilDls~v~~iDssgi-~~L~~~~~~~~~~g~~l~l~~-----~~~~v~~~l~~~gl~ 93 (106)
T TIGR02886 38 PIKHLILNLKNVTFMDSSGL-GVILGRYKKIKNEGGEVIVCN-----VSPAVKRLFELSGLF 93 (106)
T ss_pred CCCEEEEECCCCcEecchHH-HHHHHHHHHHHHcCCEEEEEe-----CCHHHHHHHHHhCCc
Confidence 46899999999875 55543 234567788889999998877 456667777777763
No 267
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=49.26 E-value=40 Score=29.56 Aligned_cols=63 Identities=22% Similarity=0.391 Sum_probs=48.9
Q ss_pred HHHhccCcEEEEecceeEEeCC-------------------------------------------------------EeC
Q 017785 77 DELIDSVETFIFDCDGVIWKGD-------------------------------------------------------KLI 101 (366)
Q Consensus 77 ~~~~~~ik~viFDiDGTL~d~~-------------------------------------------------------~~~ 101 (366)
.+++.++|+|+||+||||++++ .+.
T Consensus 8 ~~~~~~~k~iiFD~DGTL~~~~~~~~l~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (219)
T TIGR00338 8 SPLLRSKKLVVFDMDSTLINAETIDEIAKIAGVEEEVSEITERAMRGELDFKASLRERVALLKGLPVELLKEVRENLPLT 87 (219)
T ss_pred hhhhccCCEEEEeCcccCCCchHHHHHHHHhCCHHHHHHHHHHHHcCCCCHHHHHHHHHHHhCCCCHHHHHHHHhcCCcC
Confidence 4456789999999999999953 447
Q ss_pred CCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCC
Q 017785 102 DGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT 142 (366)
Q Consensus 102 ~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~ 142 (366)
|++.+.++.++++|+++.++||+ ........++.+|+.
T Consensus 88 ~g~~~~l~~l~~~g~~~~IvS~~---~~~~~~~~l~~~~i~ 125 (219)
T TIGR00338 88 EGAEELVKTLKEKGYKVAVISGG---FDLFAEHVKDKLGLD 125 (219)
T ss_pred CCHHHHHHHHHHCCCEEEEECCC---cHHHHHHHHHHcCCC
Confidence 78889999999999999999973 233444455778874
No 268
>PRK09348 glyQ glycyl-tRNA synthetase subunit alpha; Validated
Probab=48.52 E-value=17 Score=33.21 Aligned_cols=43 Identities=23% Similarity=0.179 Sum_probs=35.6
Q ss_pred CCCcH----HHHHHHHHHcCCCC--CcEEEEcCCchhhHHHHHHcCCcE
Q 017785 284 GKPST----FMMDYLANKFGIQK--SQICMVGDRLDTDILFGQNGGCKT 326 (366)
Q Consensus 284 gKP~p----~~~~~a~~~lgv~~--~~vl~VGDs~~~Di~~a~~aG~~t 326 (366)
-||+| ++|+.-++.+|++| +++-+|+|+-++-..+|--.|+-+
T Consensus 84 lKPsP~niQelYL~SL~~lGid~~~hDIRFVEDnWEsPTLGAwGlGWEV 132 (283)
T PRK09348 84 LKPSPDNIQELYLGSLEALGIDPLEHDIRFVEDNWESPTLGAWGLGWEV 132 (283)
T ss_pred EcCCCccHHHHHHHHHHHhCCCccccceeEeecCCCCCcccccccceEE
Confidence 57777 66888899999976 689999999988888888888543
No 269
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=48.51 E-value=1.3e+02 Score=33.88 Aligned_cols=86 Identities=16% Similarity=0.265 Sum_probs=50.6
Q ss_pred CCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCC-CCcCceeccH---------HHHHHHHHhcCCCCCCeE
Q 017785 101 IDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT-VTEEEIFASS---------FAAAAYLKSIDFPKDKKV 170 (366)
Q Consensus 101 ~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~-~~~~~i~~~~---------~~~~~~l~~~~~~~~~~~ 170 (366)
+|++.+.|+.|+++|+++.++||. ....+...++.+|+. ..-+.++.+. ......++..+... ..+
T Consensus 163 ~pG~~elL~~Lk~~G~~l~IvSn~---~~~~~~~~L~~~gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~lgv~p-~e~ 238 (1057)
T PLN02919 163 FPGALELITQCKNKGLKVAVASSA---DRIKVDANLAAAGLPLSMFDAIVSADAFENLKPAPDIFLAAAKILGVPT-SEC 238 (1057)
T ss_pred CccHHHHHHHHHhCCCeEEEEeCC---cHHHHHHHHHHcCCChhHCCEEEECcccccCCCCHHHHHHHHHHcCcCc-ccE
Confidence 556667778999999999999973 455555567888875 2223333322 22233344444433 335
Q ss_pred EEeccc-chHHHHHHcCCeee
Q 017785 171 YVVGED-GILKELELAGFQYL 190 (366)
Q Consensus 171 ~~~g~~-~~~~~l~~~g~~~~ 190 (366)
+++|.. .-.+..+..|++..
T Consensus 239 v~IgDs~~Di~AA~~aGm~~I 259 (1057)
T PLN02919 239 VVIEDALAGVQAARAAGMRCI 259 (1057)
T ss_pred EEEcCCHHHHHHHHHcCCEEE
Confidence 555543 33566677777544
No 270
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=48.24 E-value=1.4e+02 Score=26.08 Aligned_cols=85 Identities=22% Similarity=0.248 Sum_probs=51.3
Q ss_pred eCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCCCCcCceeccHHH---------HHHHHHhcCCCCCCeE
Q 017785 100 LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFA---------AAAYLKSIDFPKDKKV 170 (366)
Q Consensus 100 ~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~~~~~~i~~~~~~---------~~~~l~~~~~~~~~~~ 170 (366)
..+++.+.++.++.+ .++.++||. ........++++|+...-+.++.+... ....+...+.. ...+
T Consensus 100 ~~~~~~~~L~~l~~~-~~l~ilTNg---~~~~~~~~l~~~gl~~~Fd~v~~s~~~g~~KP~~~~f~~~~~~~g~~-p~~~ 174 (229)
T COG1011 100 DYPEALEALKELGKK-YKLGILTNG---ARPHQERKLRQLGLLDYFDAVFISEDVGVAKPDPEIFEYALEKLGVP-PEEA 174 (229)
T ss_pred cChhHHHHHHHHHhh-ccEEEEeCC---ChHHHHHHHHHcCChhhhheEEEecccccCCCCcHHHHHHHHHcCCC-cceE
Confidence 355667777777777 889999994 344555567889976555666666532 12233333433 2446
Q ss_pred EEecccc--hHHHHHHcCCee
Q 017785 171 YVVGEDG--ILKELELAGFQY 189 (366)
Q Consensus 171 ~~~g~~~--~~~~l~~~g~~~ 189 (366)
+++|... ...-.+..|++.
T Consensus 175 l~VgD~~~~di~gA~~~G~~~ 195 (229)
T COG1011 175 LFVGDSLENDILGARALGMKT 195 (229)
T ss_pred EEECCChhhhhHHHHhcCcEE
Confidence 6666542 335567778764
No 271
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=48.06 E-value=46 Score=27.88 Aligned_cols=40 Identities=25% Similarity=0.285 Sum_probs=30.3
Q ss_pred eCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCC
Q 017785 100 LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT 142 (366)
Q Consensus 100 ~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~ 142 (366)
+.|++.+.++.++++|+++.++|+ .....+...++.+|++
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~---~~~~~i~~~~~~~g~~ 113 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSG---GFDFFVEPVAEKLGID 113 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECC---CcHHHHHHHHHHcCCc
Confidence 467889999999999999999996 2344444455777774
No 272
>PLN02645 phosphoglycolate phosphatase
Probab=47.97 E-value=47 Score=31.37 Aligned_cols=102 Identities=15% Similarity=0.038 Sum_probs=53.2
Q ss_pred ccEEEEEccCCCCHHhHHHHHHHHHcCCCcEEEEecCCceeecCCCccccCCCccceeeeeeecCcccccCCCcHHHHHH
Q 017785 214 VGAVVVGFDRYFNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDY 293 (366)
Q Consensus 214 ~~~v~~~~~~~~~y~~l~~a~~~l~~~~g~~~i~sn~d~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~gKP~p~~~~~ 293 (366)
+|.++...+. .++...+++..+++++...+++||............+...| +. ...+.. -. +......
T Consensus 35 ~DGtl~~~~~--~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lG-i~------~~~~~I--~t-s~~~~~~ 102 (311)
T PLN02645 35 CDGVIWKGDK--LIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLG-LN------VTEEEI--FS-SSFAAAA 102 (311)
T ss_pred CcCCeEeCCc--cCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCC-CC------CChhhE--ee-hHHHHHH
Confidence 3444443332 35677888888888766678888876422111111111111 00 000110 01 1123334
Q ss_pred HHHHcCCCCCcEEEEcCCchhhHHHHHHcCCcEEE
Q 017785 294 LANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLL 328 (366)
Q Consensus 294 a~~~lgv~~~~vl~VGDs~~~Di~~a~~aG~~tv~ 328 (366)
.++..+....+.++++++. .+.+.++.+|+.++.
T Consensus 103 ~l~~~~~~~~~~V~viG~~-~~~~~l~~~Gi~~~~ 136 (311)
T PLN02645 103 YLKSINFPKDKKVYVIGEE-GILEELELAGFQYLG 136 (311)
T ss_pred HHHhhccCCCCEEEEEcCH-HHHHHHHHCCCEEec
Confidence 4455555444456666675 899999999998764
No 273
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=46.57 E-value=1.5e+02 Score=32.08 Aligned_cols=47 Identities=15% Similarity=0.195 Sum_probs=32.5
Q ss_pred HHHHcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEecCCCCcccccCCCCCCCCCEEE
Q 017785 294 LANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYT 352 (366)
Q Consensus 294 a~~~lgv~~~~vl~VGDs~~~Di~~a~~aG~~tv~V~~G~~~~~~l~~~~~~~~pd~v~ 352 (366)
.++++|- =+-+.||.. ||-.+.++|- |+|..|....+--+ ..+|.|+
T Consensus 700 ~cQr~Ga---iVaVTGDGV-NDsPALKKAD---IGVAMGiaGSDvsK-----qAADmIL 746 (1019)
T KOG0203|consen 700 GCQRQGA---IVAVTGDGV-NDSPALKKAD---IGVAMGIAGSDVSK-----QAADMIL 746 (1019)
T ss_pred hhhhcCc---EEEEeCCCc-CCChhhcccc---cceeeccccchHHH-----hhcceEE
Confidence 4565553 466779998 9999999999 55666766554433 3577776
No 274
>cd06844 STAS Sulphate Transporter and Anti-Sigma factor antagonist domain found in the C-terminal region of sulphate transporters as well as in bacterial and archaeal proteins involved in the regulation of sigma factors. The STAS (Sulphate Transporter and Anti-Sigma factor antagonist) domain is found in the C-terminal region of sulphate transporters as well as in bacterial and archaeal proteins involved in the regulation of sigma factors, like anti-anti-sigma factors and "stressosome" components. The sigma factor regulators are involved in protein-protein interaction which is regulated by phosphorylation.
Probab=46.41 E-value=39 Score=25.74 Aligned_cols=54 Identities=13% Similarity=0.181 Sum_probs=39.1
Q ss_pred cCcEEEEecceeEE-eCCEeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCC
Q 017785 82 SVETFIFDCDGVIW-KGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGL 141 (366)
Q Consensus 82 ~ik~viFDiDGTL~-d~~~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~ 141 (366)
..+.+++|+-|+=+ |+.. .....+..+.++++|..+.++. ....+.+.++..|+
T Consensus 38 ~~~~vilDls~v~~iDssg-l~~L~~l~~~~~~~g~~l~l~~-----~~~~v~~~l~~~gl 92 (100)
T cd06844 38 AGKTIVIDISALEFMDSSG-TGVLLERSRLAEAVGGQFVLTG-----ISPAVRITLTESGL 92 (100)
T ss_pred CCCEEEEECCCCcEEcHHH-HHHHHHHHHHHHHcCCEEEEEC-----CCHHHHHHHHHhCc
Confidence 47899999999886 5443 3334577788889999888876 34566666677776
No 275
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=45.70 E-value=49 Score=27.93 Aligned_cols=42 Identities=12% Similarity=0.279 Sum_probs=31.2
Q ss_pred CEeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCC
Q 017785 98 DKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT 142 (366)
Q Consensus 98 ~~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~ 142 (366)
..+.+++.+.++.+++.|+++.++||. ....+...++.+|+.
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~---~~~~~~~~l~~~~l~ 112 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDG---NDFFIDPVLEGIGEK 112 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCC---cHHHHHHHHHHcCCh
Confidence 357888899999999999999999973 334444455777764
No 276
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=45.53 E-value=31 Score=29.81 Aligned_cols=40 Identities=20% Similarity=0.265 Sum_probs=30.6
Q ss_pred EeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHH-HHHhcCCC
Q 017785 99 KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGK-KFETLGLT 142 (366)
Q Consensus 99 ~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~-~l~~lG~~ 142 (366)
.+.+++.+.++.++++|.++.++|+ +...+.+ .++.+|++
T Consensus 87 ~~~~~~~~~l~~l~~~g~~v~ivS~----s~~~~v~~~~~~lg~~ 127 (202)
T TIGR01490 87 ILYPEARDLIRWHKAEGHTIVLVSA----SLTILVKPLARILGID 127 (202)
T ss_pred hccHHHHHHHHHHHHCCCEEEEEeC----CcHHHHHHHHHHcCCc
Confidence 4688899999999999999999996 3333444 34778874
No 277
>TIGR00388 glyQ glycyl-tRNA synthetase, tetrameric type, alpha subunit. This tetrameric form of glycyl-tRNA synthetase (2 alpha, 2 beta) is found in the majority of completed eubacterial genomes, with the two genes fused in a few species. A substantially different homodimeric form (not recognized by this model) replaces this form in the Archaea, animals, yeasts, and some eubacteria.
Probab=44.83 E-value=21 Score=32.70 Aligned_cols=42 Identities=24% Similarity=0.179 Sum_probs=35.1
Q ss_pred CCCcH----HHHHHHHHHcCCCC--CcEEEEcCCchhhHHHHHHcCCc
Q 017785 284 GKPST----FMMDYLANKFGIQK--SQICMVGDRLDTDILFGQNGGCK 325 (366)
Q Consensus 284 gKP~p----~~~~~a~~~lgv~~--~~vl~VGDs~~~Di~~a~~aG~~ 325 (366)
-||+| ++|+.-++.+|++| +++-+|+|+-++-..+|--.|+-
T Consensus 81 lKPsP~niQelYL~SL~~lGid~~~hDIRFVEDnWEsPTLGAwGlGWE 128 (293)
T TIGR00388 81 IKPSPDNIQELYLDSLRALGIDPTEHDIRFVEDNWENPTLGAWGLGWE 128 (293)
T ss_pred ECCCCccHHHHHHHHHHHhCCCccccCeeEeecCCCCCcccccccccE
Confidence 57777 66788899999976 68999999998888888888854
No 278
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=44.54 E-value=46 Score=33.35 Aligned_cols=47 Identities=15% Similarity=0.149 Sum_probs=34.6
Q ss_pred eCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCCCCcCcee
Q 017785 100 LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIF 149 (366)
Q Consensus 100 ~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~~~~~~i~ 149 (366)
++|++.+.|+.|+++|+++.++|| .+.......++.+|+.-.-+.++
T Consensus 331 l~pG~~e~L~~Lk~~g~~l~IvS~---~~~~~~~~~l~~~~l~~~f~~i~ 377 (459)
T PRK06698 331 LYPNVKEIFTYIKENNCSIYIASN---GLTEYLRAIVSYYDLDQWVTETF 377 (459)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEeC---CchHHHHHHHHHCCcHhhcceeE
Confidence 367888999999999999999997 35556666678888753333333
No 279
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=44.31 E-value=70 Score=29.85 Aligned_cols=43 Identities=14% Similarity=0.177 Sum_probs=33.4
Q ss_pred CCEeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCC
Q 017785 97 GDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT 142 (366)
Q Consensus 97 ~~~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~ 142 (366)
.-.+.|++.+.++.|+++|+++.++|+. ....+...++++|+.
T Consensus 119 ~l~l~pG~~efl~~L~~~GIpv~IvS~G---~~~~Ie~vL~~lgl~ 161 (277)
T TIGR01544 119 DVMLKDGYENFFDKLQQHSIPVFIFSAG---IGNVLEEVLRQAGVY 161 (277)
T ss_pred CCccCcCHHHHHHHHHHCCCcEEEEeCC---cHHHHHHHHHHcCCC
Confidence 3467899999999999999999999962 335555556777774
No 280
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=43.30 E-value=3.2e+02 Score=27.41 Aligned_cols=62 Identities=24% Similarity=0.254 Sum_probs=38.0
Q ss_pred HHHHHHHHH-hcCCCCCcCceeccHHH--HHHHHHhcCCCCCCeEEE--ecccchHHHHHHcCCeee
Q 017785 129 RKQYGKKFE-TLGLTVTEEEIFASSFA--AAAYLKSIDFPKDKKVYV--VGEDGILKELELAGFQYL 190 (366)
Q Consensus 129 ~~~~~~~l~-~lG~~~~~~~i~~~~~~--~~~~l~~~~~~~~~~~~~--~g~~~~~~~l~~~g~~~~ 190 (366)
+..+++++. ..|+...+++++...+. ..+.+...-...+..+.+ ++-...++.++..|+++.
T Consensus 138 R~~ia~~l~~~~g~~~~~~~IiiT~G~q~al~l~~~~l~~pGd~v~vE~PtY~~~~~~~~~~g~~~~ 204 (459)
T COG1167 138 REAIAAYLLARRGISCEPEQIVITSGAQQALDLLLRLLLDPGDTVLVEDPTYPGALQALEALGARVI 204 (459)
T ss_pred HHHHHHHHHHhcCCccCcCeEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCcHHHHHHHHHcCCcEE
Confidence 567888886 89999998876554433 223333332333444443 334467888889998764
No 281
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=40.03 E-value=35 Score=30.17 Aligned_cols=38 Identities=11% Similarity=0.146 Sum_probs=28.5
Q ss_pred EeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhc
Q 017785 99 KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETL 139 (366)
Q Consensus 99 ~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~l 139 (366)
.+.|++.+.++.++++|+++.++||. ....+...++.+
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~---~~~~i~~il~~~ 111 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGG---MDFFVYPLLQGL 111 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCC---cHHHHHHHHHHh
Confidence 45888889999999999999999974 333444445555
No 282
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=39.17 E-value=50 Score=27.01 Aligned_cols=29 Identities=28% Similarity=0.493 Sum_probs=24.4
Q ss_pred CCEeCCCHHHHHHHHHHCCCeEEEEeCCC
Q 017785 97 GDKLIDGVPETLDMLRSKGKRLVFVTNNS 125 (366)
Q Consensus 97 ~~~~~~~~~~ai~~l~~~g~~~~~~Tn~s 125 (366)
.....+++.+.++.|+++|+++.++||..
T Consensus 62 ~~~~~~g~~e~l~~L~~~g~~~~i~T~~~ 90 (154)
T TIGR01549 62 EEAYIRGAADLLKRLKEAGIKLGIISNGS 90 (154)
T ss_pred hheeccCHHHHHHHHHHCcCeEEEEeCCc
Confidence 44456889999999999999999999743
No 283
>KOG3107 consensus Predicted haloacid dehalogenase-like hydrolase (eyes absent) [General function prediction only]
Probab=38.80 E-value=61 Score=31.52 Aligned_cols=42 Identities=14% Similarity=0.186 Sum_probs=35.4
Q ss_pred HHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEec
Q 017785 288 TFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLS 331 (366)
Q Consensus 288 p~~~~~a~~~lgv~~~~vl~VGDs~~~Di~~a~~aG~~tv~V~~ 331 (366)
...|+.+.+|+|- .-.-++|||.. -...+|++..|+..-|..
T Consensus 411 escFerI~~RFg~-K~~yvvIgdG~-eee~aAK~ln~PfwrI~~ 452 (468)
T KOG3107|consen 411 ESCFERIQSRFGR-KVVYVVIGDGV-EEEQAAKALNMPFWRISS 452 (468)
T ss_pred HHHHHHHHHHhCC-ceEEEEecCcH-HHHHHHHhhCCceEeecc
Confidence 6789999999998 56789999997 668899999998776544
No 284
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=38.58 E-value=2.1e+02 Score=27.30 Aligned_cols=40 Identities=20% Similarity=0.350 Sum_probs=28.3
Q ss_pred EeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH-HhcCCC
Q 017785 99 KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKF-ETLGLT 142 (366)
Q Consensus 99 ~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l-~~lG~~ 142 (366)
.+.|++.+.++.+++.|+++.++|+... .+.+.+ +++|++
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~----~~~~~l~~~Lgld 221 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFT----YFADYLRDKLRLD 221 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcc----hhHHHHHHHcCCC
Confidence 3467778889999999999999997322 223333 667774
No 285
>TIGR02990 ectoine_eutA ectoine utilization protein EutA. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti and Silicibacter pomeroyi. It is missing from two other species with the other ectoine transport and utilization genes: Pseudomonas putida and Agrobacterium tumefaciens.
Probab=36.64 E-value=2.4e+02 Score=25.66 Aligned_cols=40 Identities=15% Similarity=0.068 Sum_probs=23.8
Q ss_pred CCccEEEEEccCCCCHHhHHHHHHHHHcCCCcEEEEecCCceee
Q 017785 212 KDVGAVVVGFDRYFNYYKVQYGTLCIRENPGCLFIATNRDAVTH 255 (366)
Q Consensus 212 ~~~~~v~~~~~~~~~y~~l~~a~~~l~~~~g~~~i~sn~d~~~~ 255 (366)
.+.|+|++.--..-.++-+.+....+ |.+.+.+|.-..|+
T Consensus 180 ~~aDAifisCTnLrt~~vi~~lE~~l----GkPVlsSNqat~W~ 219 (239)
T TIGR02990 180 PDADALFLSCTALRAATCAQRIEQAI----GKPVVTSNQATAWR 219 (239)
T ss_pred CCCCEEEEeCCCchhHHHHHHHHHHH----CCCEEEHHHHHHHH
Confidence 46788888744443344444333333 77888888776664
No 286
>PRK10671 copA copper exporting ATPase; Provisional
Probab=35.96 E-value=1.1e+02 Score=33.38 Aligned_cols=102 Identities=19% Similarity=0.219 Sum_probs=61.9
Q ss_pred cCcEEEEecceeEE----eCCEeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCCCCcCceeccHHHHHH
Q 017785 82 SVETFIFDCDGVIW----KGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAA 157 (366)
Q Consensus 82 ~ik~viFDiDGTL~----d~~~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~~~~~~i~~~~~~~~~ 157 (366)
....+.+-.||+++ -.+.+.|++.++++.|++.|+++.++|+ .+........+++|++.-...+. +.. -.+
T Consensus 629 g~~~v~va~~~~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~~Tg---d~~~~a~~ia~~lgi~~~~~~~~-p~~-K~~ 703 (834)
T PRK10671 629 GATPVLLAVDGKAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTG---DNPTTANAIAKEAGIDEVIAGVL-PDG-KAE 703 (834)
T ss_pred CCeEEEEEECCEEEEEEEccCcchhhHHHHHHHHHHCCCeEEEEcC---CCHHHHHHHHHHcCCCEEEeCCC-HHH-HHH
Confidence 34567777787754 4788899999999999999999999995 45555555568899853211111 111 112
Q ss_pred HHHhcCCCCCCeEEEeccc-chHHHHHHcCCee
Q 017785 158 YLKSIDFPKDKKVYVVGED-GILKELELAGFQY 189 (366)
Q Consensus 158 ~l~~~~~~~~~~~~~~g~~-~~~~~l~~~g~~~ 189 (366)
.+++... .+..+.++|.. .-...++..|+-+
T Consensus 704 ~i~~l~~-~~~~v~~vGDg~nD~~al~~Agvgi 735 (834)
T PRK10671 704 AIKRLQS-QGRQVAMVGDGINDAPALAQADVGI 735 (834)
T ss_pred HHHHHhh-cCCEEEEEeCCHHHHHHHHhCCeeE
Confidence 2222211 23456666643 2355666666644
No 287
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=35.73 E-value=2e+02 Score=24.18 Aligned_cols=87 Identities=10% Similarity=0.079 Sum_probs=49.5
Q ss_pred CCEeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCCCCcCceeccHH---------HHHHHHHhcCCCCC
Q 017785 97 GDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSF---------AAAAYLKSIDFPKD 167 (366)
Q Consensus 97 ~~~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~~~~~~i~~~~~---------~~~~~l~~~~~~~~ 167 (366)
.-.++| ..+.|..|++. +++.++|| .+.......++.+|+.-.-+.++++.. .....+...+...
T Consensus 86 ~~~~~~-~~e~L~~L~~~-~~l~I~T~---~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~~- 159 (188)
T PRK10725 86 SVEPLP-LIEVVKAWHGR-RPMAVGTG---SESAIAEALLAHLGLRRYFDAVVAADDVQHHKPAPDTFLRCAQLMGVQP- 159 (188)
T ss_pred cCCCcc-HHHHHHHHHhC-CCEEEEcC---CchHHHHHHHHhCCcHhHceEEEehhhccCCCCChHHHHHHHHHcCCCH-
Confidence 334566 56888888765 88999997 345566666788888643344554432 1223333333332
Q ss_pred CeEEEeccc-chHHHHHHcCCee
Q 017785 168 KKVYVVGED-GILKELELAGFQY 189 (366)
Q Consensus 168 ~~~~~~g~~-~~~~~l~~~g~~~ 189 (366)
..++++|.. .-.+..+..|++.
T Consensus 160 ~~~l~igDs~~di~aA~~aG~~~ 182 (188)
T PRK10725 160 TQCVVFEDADFGIQAARAAGMDA 182 (188)
T ss_pred HHeEEEeccHhhHHHHHHCCCEE
Confidence 234445533 2355666677654
No 288
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=35.67 E-value=1.1e+02 Score=33.17 Aligned_cols=59 Identities=14% Similarity=0.224 Sum_probs=47.1
Q ss_pred ccCcEEEEecceeEEe----CCEeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCC
Q 017785 81 DSVETFIFDCDGVIWK----GDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT 142 (366)
Q Consensus 81 ~~ik~viFDiDGTL~d----~~~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~ 142 (366)
...-++.+=+||+|.- .+.+-|++..++..|++.|+++..+|+ -........-+++|++
T Consensus 701 ~g~tvv~v~vn~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTG---Dn~~aA~svA~~VGi~ 763 (951)
T KOG0207|consen 701 KGQTVVYVAVNGQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTG---DNDAAARSVAQQVGID 763 (951)
T ss_pred cCceEEEEEECCEEEEEEEeccccchhHHHHHHHHHhcCceEEEEcC---CCHHHHHHHHHhhCcc
Confidence 3556899999999975 788899999999999999999999994 3444444344788865
No 289
>COG1366 SpoIIAA Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) [Signal transduction mechanisms]
Probab=34.91 E-value=76 Score=24.98 Aligned_cols=58 Identities=21% Similarity=0.299 Sum_probs=42.1
Q ss_pred ccCcEEEEecceeEEeCCEeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCCC
Q 017785 81 DSVETFIFDCDGVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTV 143 (366)
Q Consensus 81 ~~ik~viFDiDGTL~d~~~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~~ 143 (366)
...+.++.|+.|+=+-+.....--..+++.++..|..+.++. ...++...+..+|++.
T Consensus 42 ~~~~~ivIDls~v~~~dS~gl~~L~~~~~~~~~~g~~~~l~~-----i~p~v~~~~~~~gl~~ 99 (117)
T COG1366 42 SGARGLVIDLSGVDFMDSAGLGVLVALLKSARLRGVELVLVG-----IQPEVARTLELTGLDK 99 (117)
T ss_pred CCCcEEEEECCCCceechHHHHHHHHHHHHHHhcCCeEEEEe-----CCHHHHHHHHHhCchh
Confidence 345569999999886433333335577889999999888887 4567777788888853
No 290
>PF06117 DUF957: Enterobacterial protein of unknown function (DUF957); InterPro: IPR009301 This family consists of several hypothetical proteins from Escherichia coli, Salmonella typhi, Shigella flexneri and Proteus vulgaris. The function of this family is unknown.
Probab=34.72 E-value=13 Score=26.14 Aligned_cols=29 Identities=21% Similarity=0.268 Sum_probs=23.3
Q ss_pred cEEEEecceeEEeCCEeCCCHHHHHHHHH
Q 017785 84 ETFIFDCDGVIWKGDKLIDGVPETLDMLR 112 (366)
Q Consensus 84 k~viFDiDGTL~d~~~~~~~~~~ai~~l~ 112 (366)
..++||=|+.-.||..++|....+.+.++
T Consensus 25 s~iiFDNded~tdSa~llp~ie~a~~~~r 53 (65)
T PF06117_consen 25 SDIIFDNDEDKTDSAALLPAIEQARADVR 53 (65)
T ss_pred CCeeecCCCcccchHHHHHHHHHHHHHHH
Confidence 36999999999999999887666655544
No 291
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=34.52 E-value=43 Score=31.23 Aligned_cols=37 Identities=24% Similarity=0.315 Sum_probs=26.7
Q ss_pred eCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhc
Q 017785 100 LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETL 139 (366)
Q Consensus 100 ~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~l 139 (366)
++|++.+.|+.|+++|+++.++||. +...+...++.+
T Consensus 145 l~pGv~elL~~L~~~g~~l~IvTn~---~~~~~~~~l~~~ 181 (286)
T PLN02779 145 LRPGVLRLMDEALAAGIKVAVCSTS---NEKAVSKIVNTL 181 (286)
T ss_pred chhhHHHHHHHHHHCCCeEEEEeCC---CHHHHHHHHHHh
Confidence 3567788899999999999999984 344444444544
No 292
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=33.64 E-value=69 Score=29.34 Aligned_cols=61 Identities=15% Similarity=0.213 Sum_probs=42.4
Q ss_pred HHHHHHHHHcCCCCCcEEEEcCC----chhhHHHHHHcCCcEEEEecCCCCcccccCCCCCCCCCEEECChhHHHHHHH
Q 017785 289 FMMDYLANKFGIQKSQICMVGDR----LDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKA 363 (366)
Q Consensus 289 ~~~~~a~~~lgv~~~~vl~VGDs----~~~Di~~a~~aG~~tv~V~~G~~~~~~l~~~~~~~~pd~v~~sl~~l~~~~~ 363 (366)
+.=..++++++++ +++-=|+ ...=+++|+..|++.+.|...... ++..++++++++++++.
T Consensus 184 e~n~al~~~~~i~---~lVtK~SG~~g~~eKi~AA~~lgi~vivI~RP~~~-----------~~~~~~~~~~e~l~~l~ 248 (249)
T PF02571_consen 184 ELNRALFRQYGID---VLVTKESGGSGFDEKIEAARELGIPVIVIKRPPEP-----------YGDPVVETIEELLDWLE 248 (249)
T ss_pred HHHHHHHHHcCCC---EEEEcCCCchhhHHHHHHHHHcCCeEEEEeCCCCC-----------CCCcccCCHHHHHHHHh
Confidence 4445677888873 4443333 223489999999999998875322 45666899999999875
No 293
>PF06014 DUF910: Bacterial protein of unknown function (DUF910); InterPro: IPR009256 This family consists of several short bacterial proteins of unknown function.; PDB: 2NN4_A.
Probab=33.40 E-value=28 Score=24.59 Aligned_cols=25 Identities=52% Similarity=0.719 Sum_probs=15.0
Q ss_pred HHHHHHHcCCCCCcEEEEcCCchhhHHHHH
Q 017785 291 MDYLANKFGIQKSQICMVGDRLDTDILFGQ 320 (366)
Q Consensus 291 ~~~a~~~lgv~~~~vl~VGDs~~~Di~~a~ 320 (366)
...+++++|+ ++.+||.. .||++..
T Consensus 7 VqQLLK~fG~----~IY~gdr~-~DielM~ 31 (62)
T PF06014_consen 7 VQQLLKKFGI----IIYVGDRL-WDIELME 31 (62)
T ss_dssp HHHHHHTTS---------S-HH-HHHHHHH
T ss_pred HHHHHHHCCE----EEEeCChH-HHHHHHH
Confidence 3567888886 89999997 9999865
No 294
>COG0752 GlyQ Glycyl-tRNA synthetase, alpha subunit [Translation, ribosomal structure and biogenesis]
Probab=33.10 E-value=30 Score=31.39 Aligned_cols=41 Identities=24% Similarity=0.169 Sum_probs=32.9
Q ss_pred CCCcH----HHHHHHHHHcCCCC--CcEEEEcCCchhhHHHHHHcCC
Q 017785 284 GKPST----FMMDYLANKFGIQK--SQICMVGDRLDTDILFGQNGGC 324 (366)
Q Consensus 284 gKP~p----~~~~~a~~~lgv~~--~~vl~VGDs~~~Di~~a~~aG~ 324 (366)
-||+| ++|+.-++.+|++| +++=+|+|+-++=-.+|--.|+
T Consensus 85 lKPsP~NiQeLYL~SL~~lGid~~~HDIRFVEDnWE~PTlGawGlGW 131 (298)
T COG0752 85 IKPSPDNIQELYLGSLEALGIDPLEHDIRFVEDNWENPTLGAWGLGW 131 (298)
T ss_pred ecCCCccHHHHHHHHHHHcCCChhhcceeeeccCCCCCcccccccce
Confidence 68888 45777899999986 6899999998777777766664
No 295
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=32.59 E-value=99 Score=27.22 Aligned_cols=40 Identities=23% Similarity=0.346 Sum_probs=29.3
Q ss_pred EeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCC
Q 017785 99 KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT 142 (366)
Q Consensus 99 ~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~ 142 (366)
.+.|++.+.|+.+++.+ +++++|+. ........++.+|++
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~---~~~~~~~il~~lgi~ 107 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDT---FYEFSQPLMRQLGFP 107 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCC---hHHHHHHHHHHcCCc
Confidence 46888999999999875 99999962 233333345888885
No 296
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=32.27 E-value=2e+02 Score=24.22 Aligned_cols=84 Identities=17% Similarity=0.183 Sum_probs=46.2
Q ss_pred EeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCCCCcCceeccH-------------HHHHHHHHhcCCC
Q 017785 99 KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASS-------------FAAAAYLKSIDFP 165 (366)
Q Consensus 99 ~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~~~~~~i~~~~-------------~~~~~~l~~~~~~ 165 (366)
.+.+++.+.|+.|+ .+..++||+ +.......++.+|+.-.-+.++.+. ......+...+..
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~---~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~ 157 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNG---DRAHARRALNRLGIEDCFDGIFCFDTANPDYLLPKPSPQAYEKALREAGVD 157 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCC---CHHHHHHHHHHcCcHhhhCeEEEeecccCccCCCCCCHHHHHHHHHHhCCC
Confidence 35677888888876 468899984 3455666678888753333343321 1222334444443
Q ss_pred CCCeEEEeccc-chHHHHHHcCCee
Q 017785 166 KDKKVYVVGED-GILKELELAGFQY 189 (366)
Q Consensus 166 ~~~~~~~~g~~-~~~~~l~~~g~~~ 189 (366)
. ..++++|.. .-.+..+..|++.
T Consensus 158 ~-~~~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 158 P-ERAIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred c-cceEEEeCCHHHHHHHHHcCCEE
Confidence 3 334555543 2245556666653
No 297
>PRK11590 hypothetical protein; Provisional
Probab=32.25 E-value=89 Score=27.47 Aligned_cols=39 Identities=18% Similarity=0.117 Sum_probs=28.8
Q ss_pred EeCCCHHHHH-HHHHHCCCeEEEEeCCCCCCHHHHHH-HHHhcCC
Q 017785 99 KLIDGVPETL-DMLRSKGKRLVFVTNNSTKSRKQYGK-KFETLGL 141 (366)
Q Consensus 99 ~~~~~~~~ai-~~l~~~g~~~~~~Tn~sg~~~~~~~~-~l~~lG~ 141 (366)
.++|++.+.| +.+++.|.+++++|| +...+.+ .++.+|+
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSa----s~~~~~~~il~~l~~ 135 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITG----SPQPLVEQVYFDTPW 135 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeC----CcHHHHHHHHHHccc
Confidence 4488999999 567889999999997 3344444 4477774
No 298
>PF13756 Stimulus_sens_1: Stimulus-sensing domain
Probab=31.92 E-value=33 Score=27.26 Aligned_cols=21 Identities=19% Similarity=0.327 Sum_probs=17.1
Q ss_pred ccCcEEEEecceeEE-eCCEeC
Q 017785 81 DSVETFIFDCDGVIW-KGDKLI 101 (366)
Q Consensus 81 ~~ik~viFDiDGTL~-d~~~~~ 101 (366)
.+.++-+||-||+|+ ||..+.
T Consensus 17 t~~RARlyd~dG~Ll~DSr~l~ 38 (112)
T PF13756_consen 17 TRTRARLYDPDGNLLADSRVLY 38 (112)
T ss_pred CCceEEEECCCCCEEeeccccc
Confidence 357799999999997 777664
No 299
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=31.57 E-value=88 Score=28.17 Aligned_cols=40 Identities=15% Similarity=0.279 Sum_probs=31.1
Q ss_pred EEeCCEeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHH
Q 017785 94 IWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYG 133 (366)
Q Consensus 94 L~d~~~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~ 133 (366)
++....+.|++.+.++.|..+|+++.++|+....+...-.
T Consensus 87 ~~~~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~ 126 (222)
T KOG2914|consen 87 LFMNSILMPGAEKLVNHLKNNGIPVALATSSTSASFELKI 126 (222)
T ss_pred hccccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHH
Confidence 3445667899999999999999999999976555544433
No 300
>COG4996 Predicted phosphatase [General function prediction only]
Probab=31.52 E-value=93 Score=25.66 Aligned_cols=75 Identities=17% Similarity=0.047 Sum_probs=41.5
Q ss_pred HHhHHHHHHHHHcCCCcEEEEecCCceeecCCCccccCCCccceeeeeeecCcccccCCCcHHHHH---HHHHHc-----
Q 017785 227 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMD---YLANKF----- 298 (366)
Q Consensus 227 y~~l~~a~~~l~~~~g~~~i~sn~d~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~gKP~p~~~~---~a~~~l----- 298 (366)
|..+.+.+...++...+.-.+|..+..- .-..+...+...++.++ +-+|+|.-++ +++..+
T Consensus 43 ~~~v~~~l~warnsG~i~~~~sWN~~~k-A~~aLral~~~~yFhy~----------ViePhP~K~~ML~~llr~i~~er~ 111 (164)
T COG4996 43 FPDVKETLKWARNSGYILGLASWNFEDK-AIKALRALDLLQYFHYI----------VIEPHPYKFLMLSQLLREINTERN 111 (164)
T ss_pred cHHHHHHHHHHHhCCcEEEEeecCchHH-HHHHHHHhchhhhEEEE----------EecCCChhHHHHHHHHHHHHHhhc
Confidence 6677777777776544444445443311 11112233333333433 3688885444 344333
Q ss_pred -CCCCCcEEEEcCCc
Q 017785 299 -GIQKSQICMVGDRL 312 (366)
Q Consensus 299 -gv~~~~vl~VGDs~ 312 (366)
.++|++++++.|+-
T Consensus 112 ~~ikP~~Ivy~DDR~ 126 (164)
T COG4996 112 QKIKPSEIVYLDDRR 126 (164)
T ss_pred cccCcceEEEEeccc
Confidence 47899999999984
No 301
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=31.10 E-value=90 Score=27.58 Aligned_cols=38 Identities=18% Similarity=0.128 Sum_probs=27.9
Q ss_pred EeCCCHHHHHH-HHHHCCCeEEEEeCCCCCCHHHHHHHH-HhcC
Q 017785 99 KLIDGVPETLD-MLRSKGKRLVFVTNNSTKSRKQYGKKF-ETLG 140 (366)
Q Consensus 99 ~~~~~~~~ai~-~l~~~g~~~~~~Tn~sg~~~~~~~~~l-~~lG 140 (366)
.+.|++.+.|+ .++++|.+++++|| +...+.+.+ +..+
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSa----s~~~~~~~ia~~~~ 133 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITG----SPQPLVEAVYFDSN 133 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcC----CcHHHHHHHHHhcc
Confidence 46899999996 77889999999997 444444444 4433
No 302
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=30.88 E-value=84 Score=28.91 Aligned_cols=59 Identities=14% Similarity=0.080 Sum_probs=36.8
Q ss_pred HHHHHHcCCCCCcEEEEcCC-----chhhHHHHHHcCCcEEEEecCCCCcccccCCCCCCCCCEEECChhHHHHHHHh
Q 017785 292 DYLANKFGIQKSQICMVGDR-----LDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKAA 364 (366)
Q Consensus 292 ~~a~~~lgv~~~~vl~VGDs-----~~~Di~~a~~aG~~tv~V~~G~~~~~~l~~~~~~~~pd~v~~sl~~l~~~~~~ 364 (366)
..+++++++ ++++-=|+ ...=+++|+..|++.++|..... .++..++.+++++++++..
T Consensus 190 ~al~~~~~i---~~lVtK~SG~~Gg~~eKi~AA~~lgi~vivI~RP~~-----------~~~~~~~~~~~el~~~l~~ 253 (256)
T TIGR00715 190 KALLREYRI---DAVVTKASGEQGGELEKVKAAEALGINVIRIARPQT-----------IPGVAIFDDISQLNQFVAR 253 (256)
T ss_pred HHHHHHcCC---CEEEEcCCCCccchHHHHHHHHHcCCcEEEEeCCCC-----------CCCCccCCCHHHHHHHHHH
Confidence 345555655 34443333 11446777788888777766421 2456788999999998864
No 303
>PF12694 MoCo_carrier: Putative molybdenum carrier; InterPro: IPR024755 The structure of proteins in this family contain central beta strands with flanking alpha helices. The structure is similar to that of a molybdenum cofactor carrier protein.; PDB: 3IMK_A.
Probab=30.36 E-value=35 Score=28.47 Aligned_cols=36 Identities=25% Similarity=0.428 Sum_probs=24.7
Q ss_pred EEecceeEEeCC-EeCCCHHHHHHHHHHCCCeEEEEe
Q 017785 87 IFDCDGVIWKGD-KLIDGVPETLDMLRSKGKRLVFVT 122 (366)
Q Consensus 87 iFDiDGTL~d~~-~~~~~~~~ai~~l~~~g~~~~~~T 122 (366)
+-|-||||+-+. .+--++.-+++..++.++++.++.
T Consensus 61 V~DsDgTlI~~~g~l~GGt~lT~~~a~~~~KP~l~i~ 97 (145)
T PF12694_consen 61 VRDSDGTLIFTRGELTGGTALTVEFARKHGKPCLHID 97 (145)
T ss_dssp HHTSSEEEEEESSS--HHHHHHHHHHHHTT--EEEET
T ss_pred hhhcCeEEEEecCCCCcHHHHHHHHHHHhCCCEEEEe
Confidence 458899998543 344457788889999999998873
No 304
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=29.71 E-value=1.2e+02 Score=26.14 Aligned_cols=38 Identities=26% Similarity=0.403 Sum_probs=28.4
Q ss_pred CCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCC
Q 017785 101 IDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT 142 (366)
Q Consensus 101 ~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~ 142 (366)
+|++.+.++.+++. +++.++||+ ........++.+|++
T Consensus 70 ~pg~~e~L~~L~~~-~~~~IvS~~---~~~~~~~~l~~~gl~ 107 (205)
T PRK13582 70 LPGAVEFLDWLRER-FQVVILSDT---FYEFAGPLMRQLGWP 107 (205)
T ss_pred CCCHHHHHHHHHhc-CCEEEEeCC---cHHHHHHHHHHcCCc
Confidence 67888999999988 899999963 344444455778874
No 305
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=29.66 E-value=3.2e+02 Score=23.72 Aligned_cols=84 Identities=12% Similarity=0.146 Sum_probs=46.0
Q ss_pred EeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCCCCcC-ceeccH---------HHHHHHHHhcCCCCCC
Q 017785 99 KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEE-EIFASS---------FAAAAYLKSIDFPKDK 168 (366)
Q Consensus 99 ~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~~~~~-~i~~~~---------~~~~~~l~~~~~~~~~ 168 (366)
.++|++.+.|+.| ++++.++||. +...+...++.+|+.-.-+ .++++. ......++..+... .
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~---~~~~~~~~l~~~~l~~~F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~~p-~ 160 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNG---PVSKMQHSLGKTGMLHYFPDKLFSGYDIQRWKPDPALMFHAAEAMNVNV-E 160 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCC---cHHHHHHHHHhcChHHhCcceEeeHHhcCCCCCChHHHHHHHHHcCCCH-H
Confidence 3455666666665 5899999983 3455556678788753332 233321 12223344444432 3
Q ss_pred eEEEeccc-chHHHHHHcCCee
Q 017785 169 KVYVVGED-GILKELELAGFQY 189 (366)
Q Consensus 169 ~~~~~g~~-~~~~~l~~~g~~~ 189 (366)
.+.++|.. .-.+..+..|++.
T Consensus 161 ~~l~igDs~~di~aA~~aG~~~ 182 (221)
T PRK10563 161 NCILVDDSSAGAQSGIAAGMEV 182 (221)
T ss_pred HeEEEeCcHhhHHHHHHCCCEE
Confidence 45666633 2345556788765
No 306
>PRK10494 hypothetical protein; Provisional
Probab=29.29 E-value=1.8e+02 Score=26.81 Aligned_cols=24 Identities=29% Similarity=0.357 Sum_probs=16.3
Q ss_pred HhHHHHHHHHHcCCCcEEEEecCC
Q 017785 228 YKVQYGTLCIRENPGCLFIATNRD 251 (366)
Q Consensus 228 ~~l~~a~~~l~~~~g~~~i~sn~d 251 (366)
.++.++....+..+...+++|...
T Consensus 107 ~Rl~~a~~L~r~~~~~~ii~SGg~ 130 (259)
T PRK10494 107 PRLTEGIRLWRANPGAKLIFTGGA 130 (259)
T ss_pred HHHHHHHHHHHhCCCCEEEEECCC
Confidence 567777777776666777766543
No 307
>cd01766 Ufm1 Urm1-like ubiquitin domain. Ufm1 (ubiquitin-fold modifier 1) is a post-translational UBL (ubiquitin-like) modifier with a tertiary structure similar to that of ubiquitin. Ufm1 is initially expressed as a precursor which undergoes C-terminal cleavage to expose a conserved glycine residue that is required for the conjugation reactions involving Ufm1.
Probab=28.30 E-value=74 Score=23.19 Aligned_cols=39 Identities=18% Similarity=0.313 Sum_probs=33.3
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcC
Q 017785 284 GKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGG 323 (366)
Q Consensus 284 gKP~p~~~~~a~~~lgv~~~~vl~VGDs~~~Di~~a~~aG 323 (366)
.-|--....+++|.+++++..+..|-+.- .+|--++.+|
T Consensus 25 ~aPftAvlkfaAEeFkv~~~TsAiiTndG-vGINP~qtAG 63 (82)
T cd01766 25 STPFTAVLKFAAEEFKVPAATSAIITNDG-IGINPAQTAG 63 (82)
T ss_pred cCchHHHHHHHHHhcCCCccceeEEecCc-cccChhhccc
Confidence 44666778899999999999988888775 8899999998
No 308
>KOG4166 consensus Thiamine pyrophosphate-requiring enzyme [Amino acid transport and metabolism; Coenzyme transport and metabolism]
Probab=28.11 E-value=1.4e+02 Score=29.68 Aligned_cols=38 Identities=18% Similarity=0.265 Sum_probs=25.9
Q ss_pred cCcEEEEecceeEEeCCEeCCCHHHHHHHHHHCCCeEEE-EeCC
Q 017785 82 SVETFIFDCDGVIWKGDKLIDGVPETLDMLRSKGKRLVF-VTNN 124 (366)
Q Consensus 82 ~ik~viFDiDGTL~d~~~~~~~~~~ai~~l~~~g~~~~~-~Tn~ 124 (366)
..+.+..|+||-= -+-.+...+...+..++++.+ +-||
T Consensus 540 ~P~~iViDIDGDa-----SF~Mt~~ELat~rq~~~PVKiLiLNN 578 (675)
T KOG4166|consen 540 NPDAIVIDIDGDA-----SFIMTVQELATIRQENLPVKILILNN 578 (675)
T ss_pred CcccEEEeccCCc-----eeeeehHhhhhhhhcCCceEEEEecc
Confidence 4678999999832 233355677888889998854 4453
No 309
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=26.89 E-value=1.3e+02 Score=26.38 Aligned_cols=40 Identities=10% Similarity=0.142 Sum_probs=29.6
Q ss_pred CEeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcC
Q 017785 98 DKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLG 140 (366)
Q Consensus 98 ~~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG 140 (366)
..+.|++.+.++.++++|+++.++|++ ....+...++.++
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~---~~~~i~~il~~~~ 108 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGG---MDFFVYPLLEGIV 108 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCC---cHHHHHHHHHhhC
Confidence 457889999999999999999999973 3333444455553
No 310
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=26.45 E-value=56 Score=28.23 Aligned_cols=14 Identities=29% Similarity=0.389 Sum_probs=11.1
Q ss_pred EEEecceeEEeCCE
Q 017785 86 FIFDCDGVIWKGDK 99 (366)
Q Consensus 86 viFDiDGTL~d~~~ 99 (366)
|.+||||||.|...
T Consensus 5 I~iDiDgVLad~~~ 18 (191)
T PF06941_consen 5 IAIDIDGVLADFNS 18 (191)
T ss_dssp EEEESBTTTB-HHH
T ss_pred EEEECCCCCcccHH
Confidence 89999999988653
No 311
>COG2897 SseA Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]
Probab=25.93 E-value=1.2e+02 Score=28.51 Aligned_cols=49 Identities=20% Similarity=0.227 Sum_probs=40.7
Q ss_pred CCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHH------HHcCCcEEEEecCC
Q 017785 284 GKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFG------QNGGCKTLLVLSGV 333 (366)
Q Consensus 284 gKP~p~~~~~a~~~lgv~~~~vl~VGDs~~~Di~~a------~~aG~~tv~V~~G~ 333 (366)
--|+++.|..+++.+|++.++++++=|.. +..-++ +..|..-|.|+.|.
T Consensus 71 ~lp~~e~fa~~~~~~GI~~d~tVVvYdd~-~~~~A~ra~W~l~~~Gh~~V~iLdGG 125 (285)
T COG2897 71 MLPSPEQFAKLLGELGIRNDDTVVVYDDG-GGFFAARAWWLLRYLGHENVRILDGG 125 (285)
T ss_pred CCCCHHHHHHHHHHcCCCCCCEEEEECCC-CCeehHHHHHHHHHcCCCceEEecCC
Confidence 56889999999999999999988888864 555544 57899999998876
No 312
>PF01282 Ribosomal_S24e: Ribosomal protein S24e; InterPro: IPR001976 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. This family contains the S24e ribosomal proteins from eukaryotes and archaebacteria. These proteins have 101 to 148 amino acids.; GO: 0003735 structural constituent of ribosome, 0006412 translation, 0005622 intracellular, 0005840 ribosome; PDB: 2V94_B 1YWX_A 2G1D_A 3IZ6_U 1XN9_A 2XZM_P 2XZN_P 3U5G_Y 3J16_D 3IZB_U ....
Probab=25.39 E-value=86 Score=23.51 Aligned_cols=26 Identities=27% Similarity=0.491 Sum_probs=20.7
Q ss_pred CCCcH---HHHHHHHHHcCCCCCcEEEEc
Q 017785 284 GKPST---FMMDYLANKFGIQKSQICMVG 309 (366)
Q Consensus 284 gKP~p---~~~~~a~~~lgv~~~~vl~VG 309 (366)
|+|.| ++-..+++.++++++.+++.+
T Consensus 9 g~~Tpsr~ei~~klA~~~~~~~~~ivv~~ 37 (84)
T PF01282_consen 9 GKPTPSRKEIREKLAAMLNVDPDLIVVFG 37 (84)
T ss_dssp SSSS--HHHHHHHHHHHHTSTGCCEEEEE
T ss_pred CCCCCCHHHHHHHHHHHhCCCCCeEEEec
Confidence 55554 777889999999999998877
No 313
>PRK11660 putative transporter; Provisional
Probab=24.74 E-value=1.4e+02 Score=30.92 Aligned_cols=70 Identities=14% Similarity=0.141 Sum_probs=44.1
Q ss_pred ccCcEEEEecceeEE-eCCEeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCCC--CcCceeccHHHHHH
Q 017785 81 DSVETFIFDCDGVIW-KGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTV--TEEEIFASSFAAAA 157 (366)
Q Consensus 81 ~~ik~viFDiDGTL~-d~~~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~~--~~~~i~~~~~~~~~ 157 (366)
...+.|++|+.++=. |+. -.....+..+++++ |.++.++. -...+.+.++..|+.. ....++...+.+.+
T Consensus 489 ~~~~~VVlD~~~V~~iDss-g~~~L~~l~~~l~~-g~~l~l~~-----l~~~v~~~l~~~gl~~~~~~~~if~~~~~Al~ 561 (568)
T PRK11660 489 EGKRIVVLQWDAVPVLDAG-GLDAFQRFVKRLPE-GCELRICN-----LQFQPLRTLARAGIQPIPGRLAFYPTLREALA 561 (568)
T ss_pred CCCCEEEEEcCCCCcccHH-HHHHHHHHHHHHHC-CCEEEEec-----CChHHHHHHHHCCChhhcCcccccCCHHHHHH
Confidence 457899999999764 433 23334567788888 98887776 3345677778777742 23445544444433
No 314
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=24.65 E-value=3.3e+02 Score=24.29 Aligned_cols=79 Identities=23% Similarity=0.213 Sum_probs=44.0
Q ss_pred CCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCCCCcCceeccH---------HHHHHHHHhcCCCCCCeEE
Q 017785 101 IDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASS---------FAAAAYLKSIDFPKDKKVY 171 (366)
Q Consensus 101 ~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~~~~~~i~~~~---------~~~~~~l~~~~~~~~~~~~ 171 (366)
+|++.+.|+.|++. +++.++||+... ++.+|+...-+.++.+. ......+...+... ..++
T Consensus 115 ~~gv~~~L~~L~~~-~~l~i~Tn~~~~--------~~~~gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~~~~~~-~~~~ 184 (238)
T PRK10748 115 PQATHDTLKQLAKK-WPLVAITNGNAQ--------PELFGLGDYFEFVLRAGPHGRSKPFSDMYHLAAEKLNVPI-GEIL 184 (238)
T ss_pred CccHHHHHHHHHcC-CCEEEEECCCch--------HHHCCcHHhhceeEecccCCcCCCcHHHHHHHHHHcCCCh-hHEE
Confidence 46788899999875 889999985432 24455532222333221 12222233444432 4477
Q ss_pred Eeccc--chHHHHHHcCCee
Q 017785 172 VVGED--GILKELELAGFQY 189 (366)
Q Consensus 172 ~~g~~--~~~~~l~~~g~~~ 189 (366)
++|.. .-....+..|+..
T Consensus 185 ~VGD~~~~Di~~A~~aG~~~ 204 (238)
T PRK10748 185 HVGDDLTTDVAGAIRCGMQA 204 (238)
T ss_pred EEcCCcHHHHHHHHHCCCeE
Confidence 77755 2355667788764
No 315
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=24.35 E-value=85 Score=30.28 Aligned_cols=37 Identities=27% Similarity=0.339 Sum_probs=27.7
Q ss_pred eCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhc
Q 017785 100 LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETL 139 (366)
Q Consensus 100 ~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~l 139 (366)
..|++.+.|+.|++.|+++.++||. +.......++.+
T Consensus 185 ~~pgl~elL~~Lr~~G~klfLvTNS---~~~yt~~im~~l 221 (343)
T TIGR02244 185 RDPKLPLFLSKLKEHGKKLFLLTNS---DYDYTDKGMKYL 221 (343)
T ss_pred cchhHHHHHHHHHHCCCeEEEEeCC---CHHHHHHHHHHh
Confidence 3778899999999999999999983 333333344554
No 316
>KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=23.85 E-value=37 Score=33.26 Aligned_cols=56 Identities=20% Similarity=0.247 Sum_probs=43.5
Q ss_pred cCCCcHHHHHHHHHHcCCCCCcEEEEcCCchhhHHH-HHHcCCcEEEEecCCCCccc
Q 017785 283 VGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILF-GQNGGCKTLLVLSGVTSLSM 338 (366)
Q Consensus 283 ~gKP~p~~~~~a~~~lgv~~~~vl~VGDs~~~Di~~-a~~aG~~tv~V~~G~~~~~~ 338 (366)
.+++++..-+.+++.+++.-.++++|||+...||.- -+.-|+++++|-.....+..
T Consensus 285 ~~~ySggs~~~~~~~l~~~g~diLy~gdHi~~dvl~skk~~~wrt~lv~peL~~e~~ 341 (424)
T KOG2469|consen 285 GGVYSGGSLKTVETSMKVKGKDILYGGDHIWGDVLVSKKRRGWRTVLVAPELEREDL 341 (424)
T ss_pred cccCCcchHHHHHHHhcccccceeecccceeeeEEecceecceEEEEEehhhhhhhh
Confidence 566777888889999999889999999998777643 35778999988766554433
No 317
>cd06287 PBP1_LacI_like_8 Ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors. This group includes the ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type I periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding which in turn changes the DNA binding affinity of the repressor.
Probab=23.55 E-value=5.4e+02 Score=23.09 Aligned_cols=22 Identities=18% Similarity=0.049 Sum_probs=16.2
Q ss_pred HHHHHHHcCCC-CCcEEEEc-CCc
Q 017785 291 MDYLANKFGIQ-KSQICMVG-DRL 312 (366)
Q Consensus 291 ~~~a~~~lgv~-~~~vl~VG-Ds~ 312 (366)
...+++..|++ |+++-+|| |+.
T Consensus 193 vl~al~~~gl~vP~dvsvig~~d~ 216 (269)
T cd06287 193 AVRAATELGRAVPDQLRVVTRYDG 216 (269)
T ss_pred HHHHHHHcCCCCCCceEEEeccCc
Confidence 45567788887 88888887 553
No 318
>cd01445 TST_Repeats Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain. Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.
Probab=22.79 E-value=2.8e+02 Score=22.63 Aligned_cols=50 Identities=16% Similarity=0.091 Sum_probs=34.1
Q ss_pred CCCcHHHHHHHHHHcCCCCCc-EEEEcCC---ch---hhHHHHHHcCCcEEEEecCC
Q 017785 284 GKPSTFMMDYLANKFGIQKSQ-ICMVGDR---LD---TDILFGQNGGCKTLLVLSGV 333 (366)
Q Consensus 284 gKP~p~~~~~a~~~lgv~~~~-vl~VGDs---~~---~Di~~a~~aG~~tv~V~~G~ 333 (366)
-.|.++-|...++.+|++++. +++.+++ -. .-.-+++.+|..-|.|..|-
T Consensus 76 ~~p~~~~~~~~~~~~GI~~~~~vVvY~~~~~~g~~A~r~~~~l~~~G~~~v~ildGG 132 (138)
T cd01445 76 MEPSEAEFAAMFEAKGIDLDKHLIATDGDDLGGFTACHIALAARLCGHPDVAILDGG 132 (138)
T ss_pred CCCCHHHHHHHHHHcCCCCCCeEEEECCCCCcchHHHHHHHHHHHcCCCCeEEeCCC
Confidence 456778899999999998764 5555543 11 12236667898888777763
No 319
>PRK05752 uroporphyrinogen-III synthase; Validated
Probab=22.69 E-value=5.7e+02 Score=23.03 Aligned_cols=29 Identities=14% Similarity=0.232 Sum_probs=21.7
Q ss_pred CcEEEEcCCchhhHHHHHHcCCcEEEEecCCC
Q 017785 303 SQICMVGDRLDTDILFGQNGGCKTLLVLSGVT 334 (366)
Q Consensus 303 ~~vl~VGDs~~~Di~~a~~aG~~tv~V~~G~~ 334 (366)
-.+++||... -+.++.+|+..+.+..+.+
T Consensus 211 ~~~~~ig~~t---a~a~~~~G~~~~~~a~~~t 239 (255)
T PRK05752 211 LPLFVPSPRV---AEQARAAGAQTVVDCRGAS 239 (255)
T ss_pred ceEEEeCHHH---HHHHHHcCCCceeeCCCCC
Confidence 3589999986 4578999998887765433
No 320
>PRK08508 biotin synthase; Provisional
Probab=22.38 E-value=3.2e+02 Score=25.29 Aligned_cols=40 Identities=15% Similarity=0.165 Sum_probs=26.4
Q ss_pred CHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCCC
Q 017785 103 GVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTV 143 (366)
Q Consensus 103 ~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~~ 143 (366)
...+.++.+++.+..+.++..+ |....+..+.|++.|++.
T Consensus 76 ~~~ei~~~ik~~~p~l~i~~s~-G~~~~e~l~~Lk~aGld~ 115 (279)
T PRK08508 76 YVAEAAKAVKKEVPGLHLIACN-GTASVEQLKELKKAGIFS 115 (279)
T ss_pred HHHHHHHHHHhhCCCcEEEecC-CCCCHHHHHHHHHcCCCE
Confidence 3567778888776555444332 566677778888888853
No 321
>PF02091 tRNA-synt_2e: Glycyl-tRNA synthetase alpha subunit; InterPro: IPR002310 The aminoacyl-tRNA synthetases (6.1.1. from EC) catalyse the attachment of an amino acid to its cognate transfer RNA molecule in a highly specific two-step reaction. These proteins differ widely in size and oligomeric state, and have limited sequence homology []. The 20 aminoacyl-tRNA synthetases are divided into two classes, I and II. Class I aminoacyl-tRNA synthetases contain a characteristic Rossman fold catalytic domain and are mostly monomeric []. Class II aminoacyl-tRNA synthetases share an anti-parallel beta-sheet fold flanked by alpha-helices [], and are mostly dimeric or multimeric, containing at least three conserved regions [, , ]. However, tRNA binding involves an alpha-helical structure that is conserved between class I and class II synthetases. In reactions catalysed by the class I aminoacyl-tRNA synthetases, the aminoacyl group is coupled to the 2'-hydroxyl of the tRNA, while, in class II reactions, the 3'-hydroxyl site is preferred. The synthetases specific for arginine, cysteine, glutamic acid, glutamine, isoleucine, leucine, methionine, tyrosine, tryptophan and valine belong to class I synthetases. The synthetases specific for alanine, asparagine, aspartic acid, glycine, histidine, lysine, phenylalanine, proline, serine, and threonine belong to class-II synthetases []. Based on their mode of binding to the tRNA acceptor stem, both classes of tRNA synthetases have been subdivided into three subclasses, designated 1a, 1b, 1c and 2a, 2b, 2c. In eubacteria, glycyl-tRNA synthetase (6.1.1.14 from EC) is an alpha2/beta2 tetramer composed of 2 different subunits [, , ]. In some eubacteria, in archaea and eukaryota, glycyl-tRNA synthetase is an alpha2 dimer (see IPR002315 from INTERPRO). It belongs to class IIc and is one of the most complex synthetases. What is most interesting is the lack of similarity between the two types: divergence at the sequence level is so great that it is impossible to infer descent from common genes. The alpha and beta subunits (see IPR002311 from INTERPRO) also lack significant sequence similarity. However, they are translated from a single mRNA [], and a single chain glycyl-tRNA synthetase from Chlamydia trachomatis has been found to have significant similarity with both domains, suggesting divergence from a single polypeptide chain []. This entry represents the alpha subunit of glycyl-tRNA synthetase.; GO: 0000166 nucleotide binding, 0004820 glycine-tRNA ligase activity, 0005524 ATP binding, 0006426 glycyl-tRNA aminoacylation, 0005737 cytoplasm; PDB: 3RF1_A 3UFG_B 3RGL_B 1J5W_B.
Probab=22.33 E-value=22 Score=32.65 Aligned_cols=41 Identities=24% Similarity=0.188 Sum_probs=28.0
Q ss_pred CCCcH----HHHHHHHHHcCCCC--CcEEEEcCCchhhHHHHHHcCC
Q 017785 284 GKPST----FMMDYLANKFGIQK--SQICMVGDRLDTDILFGQNGGC 324 (366)
Q Consensus 284 gKP~p----~~~~~a~~~lgv~~--~~vl~VGDs~~~Di~~a~~aG~ 324 (366)
-||+| ++|+.-++.+|+++ +++-+|+|+-++-..+|--.|+
T Consensus 79 lKPsP~niq~lYL~SL~~lGId~~~hDIRFVEDnWEsPtLGAwGlGW 125 (284)
T PF02091_consen 79 LKPSPDNIQELYLESLEALGIDPKEHDIRFVEDNWESPTLGAWGLGW 125 (284)
T ss_dssp EES--TTHHHHHHHHHHHCT--CCCS-EEEEEE-EEETTTTEEEEEE
T ss_pred EcCCCccHHHHHHHHHHHhCCCccccceeEeecCCCCCccccccccc
Confidence 57777 67888899999975 6899999998887777766664
No 322
>COG0548 ArgB Acetylglutamate kinase [Amino acid transport and metabolism]
Probab=21.16 E-value=2.3e+02 Score=26.22 Aligned_cols=58 Identities=21% Similarity=0.371 Sum_probs=46.8
Q ss_pred CcEEEEecceeEEeCCEeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCCCCC
Q 017785 83 VETFIFDCDGVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVT 144 (366)
Q Consensus 83 ik~viFDiDGTL~d~~~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~~~~ 144 (366)
.|.+..=+.|..++.+.+.....+.+..|+..|++.+++-. ...++.+.++++|++..
T Consensus 2 ~k~~VIK~GG~~~~~~~l~~~~~~di~lL~~~G~~~VvVHG----ggp~I~~~l~~~gie~~ 59 (265)
T COG0548 2 GKTIVIKLGGSAMEDENLLEAFASDIALLKSVGIRPVVVHG----GGPQIDEMLAKLGIEPE 59 (265)
T ss_pred CceEEEEECceeecCchHHHHHHHHHHHHHHCCCcEEEEeC----CchHHHHHHHHcCCCCe
Confidence 46788889999999988888888999999999998887775 34566667788888643
No 323
>PRK08238 hypothetical protein; Validated
Probab=20.21 E-value=1.9e+02 Score=29.25 Aligned_cols=38 Identities=26% Similarity=0.344 Sum_probs=29.4
Q ss_pred CCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHhcCC
Q 017785 101 IDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGL 141 (366)
Q Consensus 101 ~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l~~lG~ 141 (366)
.|++.+.++.++++|.++.++|+ .+.......++.+|+
T Consensus 74 ~pga~e~L~~lk~~G~~v~LaTa---s~~~~a~~i~~~lGl 111 (479)
T PRK08238 74 NEEVLDYLRAERAAGRKLVLATA---SDERLAQAVAAHLGL 111 (479)
T ss_pred ChhHHHHHHHHHHCCCEEEEEeC---CCHHHHHHHHHHcCC
Confidence 57889999999999999999996 234444444577886
No 324
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=20.14 E-value=1.7e+02 Score=29.52 Aligned_cols=63 Identities=13% Similarity=0.119 Sum_probs=0.0
Q ss_pred cHHHHHHHHHHcCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEecCCCCcccccCCCCCCCCCEEECChhHHHHHHHhh
Q 017785 287 STFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSLSMLQSPNNSIQPDFYTNKISDFLSLKAAA 365 (366)
Q Consensus 287 ~p~~~~~a~~~lgv~~~~vl~VGDs~~~Di~~a~~aG~~tv~V~~G~~~~~~l~~~~~~~~pd~v~~sl~~l~~~~~~~ 365 (366)
.|+-=....+.+.-.-..++|+||.. ||..+.+.|. |.|.-| ..+. +|+++-+ .++..+....
T Consensus 391 ~p~~K~~~v~~l~~~g~~v~~vGDg~-nD~~al~~Ad---vgia~~-----a~~~------adivl~~-~~l~~i~~~~ 453 (499)
T TIGR01494 391 TPEEKAALVEALQKKGRVVAMTGDGV-NDAPALKKAD---VGIAMG-----AKAA------ADIVLLD-DNLSTIVDAL 453 (499)
T ss_pred CHHHHHHHHHHHHHCCCEEEEECCCh-hhHHHHHhCC---Cccccc-----hHHh------CCeEEec-CCHHHHHHHH
No 325
>COG2433 Uncharacterized conserved protein [Function unknown]
Probab=20.06 E-value=5.6e+02 Score=26.73 Aligned_cols=54 Identities=20% Similarity=0.310 Sum_probs=38.8
Q ss_pred EEEEecceeEEeCC--EeCCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH-HhcCC
Q 017785 85 TFIFDCDGVIWKGD--KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKF-ETLGL 141 (366)
Q Consensus 85 ~viFDiDGTL~d~~--~~~~~~~~ai~~l~~~g~~~~~~Tn~sg~~~~~~~~~l-~~lG~ 141 (366)
.-+.|+||-+++-. +-+ +..+.+..+.+.|.|+++.|.- .+..+.++++ ..+|-
T Consensus 257 iAvldldGevl~~~S~r~~-~~~eVve~I~~lG~PvvVAtDV--tp~P~~V~KiAasf~A 313 (652)
T COG2433 257 IAVLDLDGEVLDLESRRGI-DRSEVVEFISELGKPVVVATDV--TPAPETVKKIAASFNA 313 (652)
T ss_pred EEEEecCCcEEeeeccccC-CHHHHHHHHHHcCCceEEEccC--CCChHHHHHHHHHcCC
Confidence 45899999999833 222 2457788888999999999973 3555666666 56664
Done!