Query 017786
Match_columns 366
No_of_seqs 283 out of 1664
Neff 7.6
Searched_HMMs 46136
Date Fri Mar 29 03:25:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017786.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017786hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2738 Putative methionine am 100.0 2.6E-87 5.7E-92 610.2 26.4 298 68-365 56-359 (369)
2 PLN03158 methionine aminopepti 100.0 5.1E-74 1.1E-78 564.0 33.9 323 39-365 12-380 (396)
3 COG0024 Map Methionine aminope 100.0 2.8E-61 6.1E-66 443.8 26.9 244 122-365 4-251 (255)
4 PRK12897 methionine aminopepti 100.0 3E-57 6.5E-62 423.2 28.4 246 121-366 2-248 (248)
5 PRK12318 methionine aminopepti 100.0 1.3E-56 2.8E-61 427.2 30.6 245 122-366 42-289 (291)
6 PRK07281 methionine aminopepti 100.0 1.1E-56 2.4E-61 425.7 29.8 246 121-366 2-280 (286)
7 PRK12896 methionine aminopepti 100.0 3.5E-55 7.5E-60 410.5 28.6 247 119-365 6-254 (255)
8 TIGR00500 met_pdase_I methioni 100.0 1.6E-54 3.4E-59 404.4 28.8 244 122-365 2-246 (247)
9 PRK05716 methionine aminopepti 100.0 4.5E-54 9.8E-59 402.3 28.5 246 121-366 3-249 (252)
10 cd01086 MetAP1 Methionine Amin 100.0 1.6E-50 3.6E-55 375.2 27.7 237 129-365 1-238 (238)
11 PRK09795 aminopeptidase; Provi 100.0 7E-50 1.5E-54 392.8 26.6 225 117-366 121-351 (361)
12 PRK15173 peptidase; Provisiona 100.0 8.6E-48 1.9E-52 372.1 25.8 230 111-366 83-315 (323)
13 COG0006 PepP Xaa-Pro aminopept 100.0 4.6E-48 9.9E-53 382.9 24.1 231 110-365 141-375 (384)
14 PRK10879 proline aminopeptidas 100.0 7E-48 1.5E-52 386.6 25.0 238 112-365 162-419 (438)
15 cd01090 Creatinase Creatine am 100.0 5.6E-47 1.2E-51 349.6 25.7 224 129-365 1-228 (228)
16 PRK14575 putative peptidase; P 100.0 4.1E-47 8.9E-52 378.2 25.5 231 110-366 165-398 (406)
17 cd01087 Prolidase Prolidase. E 100.0 7.7E-47 1.7E-51 351.8 25.3 223 129-365 1-243 (243)
18 TIGR02993 ectoine_eutD ectoine 100.0 3.1E-47 6.6E-52 377.6 23.9 233 111-366 146-383 (391)
19 PRK14576 putative endopeptidas 100.0 1.7E-46 3.8E-51 373.5 25.6 231 110-366 164-397 (405)
20 TIGR00495 crvDNA_42K 42K curve 100.0 7.4E-44 1.6E-48 351.0 27.5 244 121-365 11-336 (389)
21 PRK13607 proline dipeptidase; 100.0 1E-44 2.2E-49 363.4 20.6 247 112-365 150-438 (443)
22 cd01092 APP-like Similar to Pr 100.0 3.5E-43 7.6E-48 318.7 25.2 207 129-360 1-208 (208)
23 cd01085 APP X-Prolyl Aminopept 100.0 4.1E-42 8.8E-47 316.2 24.5 209 130-362 5-221 (224)
24 PTZ00053 methionine aminopepti 100.0 3E-41 6.5E-46 335.0 28.9 238 119-365 148-466 (470)
25 PRK08671 methionine aminopepti 100.0 3.5E-41 7.5E-46 321.6 27.0 227 128-365 1-291 (291)
26 PF00557 Peptidase_M24: Metall 100.0 3.9E-41 8.5E-46 305.5 21.6 204 130-357 1-207 (207)
27 cd01091 CDC68-like Related to 100.0 1.4E-40 3E-45 309.5 23.4 226 129-365 1-243 (243)
28 cd01089 PA2G4-like Related to 100.0 1.9E-40 4.2E-45 306.1 23.2 216 129-365 1-228 (228)
29 TIGR00501 met_pdase_II methion 100.0 4.4E-40 9.5E-45 314.4 26.2 229 126-365 2-295 (295)
30 cd01088 MetAP2 Methionine Amin 100.0 4.9E-40 1.1E-44 313.7 25.4 226 129-365 1-291 (291)
31 cd01066 APP_MetAP A family inc 100.0 6.2E-40 1.3E-44 295.0 24.0 206 129-360 1-207 (207)
32 KOG2414 Putative Xaa-Pro amino 100.0 1.1E-38 2.3E-43 302.8 17.8 233 115-365 220-471 (488)
33 KOG2737 Putative metallopeptid 100.0 6.1E-34 1.3E-38 267.9 18.2 247 115-365 177-466 (492)
34 KOG1189 Global transcriptional 99.9 1.3E-23 2.8E-28 211.9 16.9 250 99-366 113-378 (960)
35 KOG2413 Xaa-Pro aminopeptidase 99.9 6E-21 1.3E-25 190.3 18.1 226 114-361 298-537 (606)
36 KOG2775 Metallopeptidase [Gene 99.9 7.6E-21 1.6E-25 174.8 16.7 233 124-365 80-393 (397)
37 KOG2776 Metallopeptidase [Gene 99.8 2.7E-18 5.8E-23 161.7 19.1 243 121-365 13-339 (398)
38 COG5406 Nucleosome binding fac 99.6 1.8E-15 4E-20 150.7 13.8 243 107-365 154-417 (1001)
39 cd01086 MetAP1 Methionine Amin 97.5 0.0015 3.3E-08 60.3 11.6 103 236-357 2-105 (238)
40 PLN03158 methionine aminopepti 97.4 0.0012 2.5E-08 65.9 11.0 115 220-357 126-247 (396)
41 cd01066 APP_MetAP A family inc 97.3 0.0035 7.5E-08 55.7 11.5 102 130-233 102-204 (207)
42 cd01088 MetAP2 Methionine Amin 97.0 0.0064 1.4E-07 58.2 10.9 97 236-357 2-100 (291)
43 cd01092 APP-like Similar to Pr 97.0 0.0079 1.7E-07 54.0 10.8 99 130-232 103-204 (208)
44 PRK05716 methionine aminopepti 96.9 0.0088 1.9E-07 55.7 11.0 100 131-233 119-240 (252)
45 PRK12896 methionine aminopepti 96.9 0.008 1.7E-07 56.1 10.4 110 225-357 4-120 (255)
46 TIGR00500 met_pdase_I methioni 96.8 0.015 3.2E-07 54.1 11.5 100 131-233 117-238 (247)
47 PRK15173 peptidase; Provisiona 96.7 0.016 3.5E-07 56.3 11.2 103 130-233 202-306 (323)
48 KOG2738 Putative methionine am 96.7 0.0093 2E-07 56.2 8.8 87 236-325 123-212 (369)
49 COG0024 Map Methionine aminope 96.6 0.019 4.2E-07 53.7 10.5 86 237-324 13-101 (255)
50 PRK08671 methionine aminopepti 96.6 0.031 6.7E-07 53.6 12.2 95 131-232 102-205 (291)
51 PRK14575 putative peptidase; P 96.6 0.021 4.6E-07 57.3 11.4 101 131-233 286-389 (406)
52 PRK12897 methionine aminopepti 96.6 0.018 4E-07 53.6 10.1 100 131-233 118-239 (248)
53 PRK14576 putative endopeptidas 96.5 0.026 5.7E-07 56.6 11.6 102 131-233 285-388 (405)
54 cd01091 CDC68-like Related to 96.5 0.031 6.8E-07 52.1 11.1 100 130-233 119-234 (243)
55 TIGR02993 ectoine_eutD ectoine 96.4 0.026 5.6E-07 56.4 10.7 97 131-233 271-374 (391)
56 PRK09795 aminopeptidase; Provi 96.3 0.044 9.5E-07 54.0 11.8 104 126-232 236-341 (361)
57 cd01090 Creatinase Creatine am 96.3 0.055 1.2E-06 49.9 11.5 100 131-233 110-220 (228)
58 PRK12318 methionine aminopepti 96.3 0.038 8.3E-07 52.9 10.7 86 131-219 159-247 (291)
59 PRK07281 methionine aminopepti 96.2 0.04 8.7E-07 52.7 10.2 83 131-218 149-237 (286)
60 TIGR00495 crvDNA_42K 42K curve 96.2 0.056 1.2E-06 54.0 11.5 103 237-357 21-130 (389)
61 PF00557 Peptidase_M24: Metall 96.1 0.053 1.1E-06 48.7 10.4 98 236-356 1-99 (207)
62 cd01087 Prolidase Prolidase. E 96.1 0.06 1.3E-06 49.8 10.6 102 131-233 104-235 (243)
63 TIGR00501 met_pdase_II methion 96.0 0.1 2.2E-06 50.2 11.9 96 237-357 7-104 (295)
64 cd01089 PA2G4-like Related to 95.9 0.075 1.6E-06 48.9 10.4 98 130-233 120-220 (228)
65 COG0006 PepP Xaa-Pro aminopept 95.2 0.21 4.5E-06 49.6 11.5 97 132-233 264-367 (384)
66 PTZ00053 methionine aminopepti 94.7 0.25 5.4E-06 50.3 10.5 102 131-232 264-376 (470)
67 PRK10879 proline aminopeptidas 93.4 0.78 1.7E-05 46.6 11.2 100 132-232 284-410 (438)
68 cd01085 APP X-Prolyl Aminopept 91.0 3.8 8.2E-05 37.6 11.7 95 133-232 114-215 (224)
69 PRK13607 proline dipeptidase; 89.5 3 6.5E-05 42.4 10.5 89 132-220 270-391 (443)
70 KOG2776 Metallopeptidase [Gene 80.9 7.3 0.00016 38.1 7.8 92 238-358 24-133 (398)
71 PF07305 DUF1454: Protein of u 69.7 28 0.0006 31.1 7.8 75 235-322 114-188 (200)
72 KOG1189 Global transcriptional 68.5 21 0.00045 38.4 7.9 97 132-233 259-368 (960)
73 KOG2775 Metallopeptidase [Gene 61.4 1.1E+02 0.0023 29.7 10.5 83 236-324 86-175 (397)
74 cd01666 TGS_DRG_C TGS_DRG_C: 60.7 31 0.00068 26.0 5.7 52 150-212 21-73 (75)
75 PF00254 FKBP_C: FKBP-type pep 52.0 20 0.00042 27.5 3.5 51 201-260 2-59 (94)
76 COG5406 Nucleosome binding fac 50.0 53 0.0011 34.8 7.0 74 138-215 306-384 (1001)
77 PRK01490 tig trigger factor; P 41.0 66 0.0014 32.4 6.3 57 153-233 131-191 (435)
78 PF05184 SapB_1: Saposin-like 37.2 80 0.0017 19.9 4.1 34 135-168 3-36 (39)
79 TIGR00115 tig trigger factor. 36.5 85 0.0018 31.3 6.2 57 153-233 119-180 (408)
80 cd04938 TGS_Obg-like TGS_Obg-l 33.7 68 0.0015 24.1 3.8 47 150-212 28-74 (76)
81 PF03477 ATP-cone: ATP cone do 28.4 45 0.00098 25.4 2.2 36 137-172 39-74 (90)
82 PF12631 GTPase_Cys_C: Catalyt 28.3 1.4E+02 0.003 22.0 4.7 43 234-276 10-52 (73)
83 PF09506 Salt_tol_Pase: Glucos 28.3 1.9E+02 0.0041 28.4 6.6 52 124-175 97-148 (381)
84 PF10415 FumaraseC_C: Fumarase 28.0 81 0.0018 22.2 3.2 35 131-165 10-49 (55)
85 TIGR02399 salt_tol_Pase glucos 27.1 2E+02 0.0043 28.3 6.5 52 124-175 103-154 (389)
86 PF06135 DUF965: Bacterial pro 22.1 90 0.002 23.8 2.6 29 261-289 16-44 (79)
87 COG0414 PanC Panthothenate syn 20.3 2.3E+02 0.005 27.0 5.4 58 218-279 181-239 (285)
No 1
>KOG2738 consensus Putative methionine aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.6e-87 Score=610.20 Aligned_cols=298 Identities=62% Similarity=1.041 Sum_probs=284.9
Q ss_pred HHHhhhhhcccCCCCCCCCCCCCccCCCCCCCCCCCCCCCCccCCCC----CCCCc-cccCCCHHHHHHHHHHHHHHHHH
Q 017786 68 MRIRRERELQTTTKFRKRPPLRRGRVSPRLPVPDHIPKPPYVSSTSL----PDLSP-EYQIHDSESIAKMRAACELAARV 142 (366)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~l~~g~~s~~~~vp~~i~~p~y~~~~~~----~~l~~-~R~iKs~~EI~~~R~A~~ia~~~ 142 (366)
..+++++++++++.|.|+++||||++||+++||++|++|+|++.+.+ +.... ...|+++++|+.||+||+|++++
T Consensus 56 ~~~~~~g~~~p~p~~~~~g~Lr~~pvsprr~VP~hI~rPdya~~g~s~se~~~~~s~~i~i~~~e~ie~mR~ac~Larev 135 (369)
T KOG2738|consen 56 LRIRKEGQYNPWPKFRFTGPLRPGPVSPRRPVPDHIPRPDYADSGVSLSEQPEISSNEIKILDPEGIEGMRKACRLAREV 135 (369)
T ss_pred hhhhhhccCCCCccccccCCccccCCCCCCcCCccCCCCchhhcCCcccccccccccceeccCHHHHHHHHHHHHHHHHH
Confidence 44566678889999999999999999999999999999999998543 22322 45789999999999999999999
Q ss_pred HHHHhHhccCCccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCeeeecCCCCcccCCCCCCCCCCCCEEEEEeccccCcEE
Q 017786 143 LDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINIDVTVYLNGYH 222 (366)
Q Consensus 143 l~~~~~~i~pGvTe~ei~~~~~~~~~~~G~~ps~~~~~~fp~~v~~g~n~~~~h~~p~~~~l~~GDiv~iD~g~~~~GY~ 222 (366)
|++|..+++||+|++||++++|++++++|+|||++||++||+++|+|+|+++|||+|+.|+||+||+|+||++++++|||
T Consensus 136 Ld~Aa~~v~PgvTTdEiD~~VH~a~Ierg~YPSPLnYy~FPKS~CTSVNEviCHGIPD~RpLedGDIvNiDVtvY~~GyH 215 (369)
T KOG2738|consen 136 LDYAATLVRPGVTTDEIDRAVHNAIIERGAYPSPLNYYGFPKSVCTSVNEVICHGIPDSRPLEDGDIVNIDVTVYLNGYH 215 (369)
T ss_pred HHHHhhhcCCCccHHHHHHHHHHHHHhcCCcCCCcccCCCchhhhcchhheeecCCCCcCcCCCCCEEeEEEEEEecccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCccCCceeeccCCccccCCccccC
Q 017786 223 GDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGVVERFVGHGVGKVFHSEPIIYHN 302 (366)
Q Consensus 223 ~D~sRT~~vG~~~~e~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~ai~~~~~~~G~~~~~~~~GHgIG~~~he~P~i~~~ 302 (366)
+|+++||+||+++++.++|+++++||++.||+.+|||+++++|++.|++++.++||++++.|+|||||..||..|.|.||
T Consensus 216 GDlneTffvG~Vde~~k~LVkvT~EcL~kaI~~~kpGv~freiG~iI~kha~~~g~sVVr~ycGHGig~~FH~~PnipHy 295 (369)
T KOG2738|consen 216 GDLNETFFVGNVDEKAKKLVKVTRECLEKAIAIVKPGVSFREIGNIIQKHATKNGYSVVRSYCGHGIGRVFHCAPNIPHY 295 (369)
T ss_pred CccccceEeeccCHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHhhhcCceeehhhhccccccccccCCCchhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CC-CCCccccCCcEEEEccceecCcccccccCCCCeeeecCCCceEEEEEEEEEeCCceEeCCC
Q 017786 303 RN-ENPGCMVEGQTFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHTILITRTGAEILTI 365 (366)
Q Consensus 303 ~~-~~~~~l~~GmvftiEP~i~~~~~~~~~~~d~wt~~t~dg~~~a~~EdtvlVTedG~EiLT~ 365 (366)
.+ +..++|++||+||||||++.|.++..+|+|+||++|+||+.+||||||+|||++|+||||+
T Consensus 296 a~n~a~GvM~~G~tFTIEPmit~G~~~d~tWPD~WT~vTaDG~~sAQFEhTlLVT~tG~EILT~ 359 (369)
T KOG2738|consen 296 AKNKAPGVMKPGQTFTIEPMITIGTWEDITWPDDWTAVTADGKRSAQFEHTLLVTETGCEILTK 359 (369)
T ss_pred cccCCcceeecCceEEeeeeecccccccccCCCCceEEecCCceecceeeEEEEecccceehhc
Confidence 76 4789999999999999999999999999999999999999999999999999999999996
No 2
>PLN03158 methionine aminopeptidase; Provisional
Probab=100.00 E-value=5.1e-74 Score=564.02 Aligned_cols=323 Identities=45% Similarity=0.796 Sum_probs=296.7
Q ss_pred cCCCCCCCCCcCCCcceeeec-cc----chhHHHHHHhhh-----------h------------------------hccc
Q 017786 39 LSPSSTGRQARCPNKLVVHAK-RI----SGLEEAMRIRRE-----------R------------------------ELQT 78 (366)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~-----------~------------------------~~~~ 78 (366)
|+ .|++++ . .+|++|.| ++ +-+|.+.|++.+ . .+.+
T Consensus 12 c~--~c~~~a-~-l~Cp~C~k~~~~~~~s~fCsq~CFk~~w~~Hk~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (396)
T PLN03158 12 CA--RCSKPA-H-LQCPKCLELKLPREGASFCSQDCFKAAWSSHKSVHTKAKLSSIGQNSDAPAEGWLYCLKKGQARTSK 87 (396)
T ss_pred cc--CCCCcc-c-ccCccchhcCCCCCCceeECHHHHHHHHHHHHHHHHhhhhcccccccccccccccccccccccccCC
Confidence 65 567733 3 78888888 76 457777777654 0 1355
Q ss_pred CCCCCCCCCCCCccCCCCCCCCCCCCCCCCccCCCC-----CCCCccccCCCHHHHHHHHHHHHHHHHHHHHHhHhccCC
Q 017786 79 TTKFRKRPPLRRGRVSPRLPVPDHIPKPPYVSSTSL-----PDLSPEYQIHDSESIAKMRAACELAARVLDAAGKLVRPS 153 (366)
Q Consensus 79 ~~~~~~~~~l~~g~~s~~~~vp~~i~~p~y~~~~~~-----~~l~~~R~iKs~~EI~~~R~A~~ia~~~l~~~~~~i~pG 153 (366)
++.|+|+++||||++||.+.||++|++|+|+..+.+ ..+.+.|.|||++||+.||+|+++++++++++.+.++||
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~p~~i~~p~y~~~~~~~~~~~~~~~~~~~IKsp~EIe~mR~A~~ia~~al~~a~~~irpG 167 (396)
T PLN03158 88 LPDFDWTGPLRPYPISPRRVVPDHIPKPDWALDGTPKIEPNSDLQHSVEIKTPEQIQRMRETCRIAREVLDAAARAIKPG 167 (396)
T ss_pred CCCCCCCcccccCCCCCCCCCCccCCCCccccCCCCccccccccccceeeCCHHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 677999999999999999999999999999987533 245568999999999999999999999999999999999
Q ss_pred ccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCeeeecCCCCcccCCCCCCCCCCCCEEEEEeccccCcEEeceeeEEEccC
Q 017786 154 VTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGN 233 (366)
Q Consensus 154 vTe~ei~~~~~~~~~~~G~~ps~~~~~~fp~~v~~g~n~~~~h~~p~~~~l~~GDiv~iD~g~~~~GY~~D~sRT~~vG~ 233 (366)
+||.||+++++++++++|++|++++|.+||+++|+|.|+.++|++|++++|++||+|+||++++++||++|++|||+||+
T Consensus 168 vTe~EI~~~v~~~~~~~Ga~ps~l~y~~fp~svcts~N~~i~Hgip~~r~L~~GDiV~iDvg~~~~GY~aD~tRT~~VG~ 247 (396)
T PLN03158 168 VTTDEIDRVVHEATIAAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDARKLEDGDIVNVDVTVYYKGCHGDLNETFFVGN 247 (396)
T ss_pred CCHHHHHHHHHHHHHHcCCccccccccCCCceeeecccccccCCCCCCccCCCCCEEEEEEeEEECCEEEeEEeEEEcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCccCCceeeccCCccccCCccccCCC-CCCccccC
Q 017786 234 VSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGVVERFVGHGVGKVFHSEPIIYHNRN-ENPGCMVE 312 (366)
Q Consensus 234 ~~~e~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~ai~~~~~~~G~~~~~~~~GHgIG~~~he~P~i~~~~~-~~~~~l~~ 312 (366)
+++++++++++++++++++++++|||++++||+++++++++++||.++++++|||||+.+||.|.|.++.+ +..++|++
T Consensus 248 ~~~e~~~l~e~~~eal~~aI~~vkPGv~~~dI~~~i~~~~~~~G~~~v~~~~GHGIG~~~He~P~i~~~~~~~~~~~l~~ 327 (396)
T PLN03158 248 VDEASRQLVKCTYECLEKAIAIVKPGVRYREVGEVINRHATMSGLSVVKSYCGHGIGELFHCAPNIPHYARNKAVGVMKA 327 (396)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHcCCCccCCccCCccccccCCCCCCCcccCCCCCCEecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999988643 34579999
Q ss_pred CcEEEEccceecCcccccccCCCCeeeecCCCceEEEEEEEEEeCCceEeCCC
Q 017786 313 GQTFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHTILITRTGAEILTI 365 (366)
Q Consensus 313 GmvftiEP~i~~~~~~~~~~~d~wt~~t~dg~~~a~~EdtvlVTedG~EiLT~ 365 (366)
||||||||+++.+.....+|+|+||++|.||.+++|||||||||++|+|+||.
T Consensus 328 GMVfTIEP~i~~g~~~~~~~~d~wt~~t~dG~~~aq~E~tvlVTe~G~EiLT~ 380 (396)
T PLN03158 328 GQVFTIEPMINAGVWRDRMWPDGWTAVTADGKRSAQFEHTLLVTETGVEVLTA 380 (396)
T ss_pred CcEEEECCeeccCcccceecCCCceEEecCCceeeEeeeEEEEeCCcceECCC
Confidence 99999999999988888899999999999999999999999999999999996
No 3
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=2.8e-61 Score=443.76 Aligned_cols=244 Identities=46% Similarity=0.782 Sum_probs=234.0
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHhHhccCCccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCeeeecCCCCcccCCCC-
Q 017786 122 QIHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPD- 200 (366)
Q Consensus 122 ~iKs~~EI~~~R~A~~ia~~~l~~~~~~i~pGvTe~ei~~~~~~~~~~~G~~ps~~~~~~fp~~v~~g~n~~~~h~~p~- 200 (366)
.+|+++||+.||+|++|++++++++.+.++||+|+.||+..+++.+.++|++|++++|.+||..+|+|+|+++|||+|+
T Consensus 4 ~ikt~~eiek~r~Ag~i~a~~l~~~~~~v~pGvtt~Eld~~~~~~i~~~ga~pa~~gy~g~~~~~ciSvNe~v~HgiP~d 83 (255)
T COG0024 4 SIKTPEEIEKMREAGKIAAKALKEVASLVKPGVTTLELDEIAEEFIREKGAYPAFLGYKGFPFPTCISVNEVVAHGIPGD 83 (255)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHcCceehhccCcCCCcceEeehhheeeecCCCC
Confidence 3899999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCCEEEEEeccccCcEEeceeeEEEccCCC-HHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCC
Q 017786 201 SRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVS-DGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFG 279 (366)
Q Consensus 201 ~~~l~~GDiv~iD~g~~~~GY~~D~sRT~~vG~~~-~e~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~ai~~~~~~~G~~ 279 (366)
+++|++||+|+||+|+.++||++|.++||.||+.+ +..++|.+++++|++++|+.+|||++++||+++|+++++++||.
T Consensus 84 ~~vlk~GDiv~IDvg~~~dG~~~Dsa~T~~vg~~~~~~~~~L~~~t~eal~~~I~~vkpG~~l~~Ig~aIq~~~~~~G~~ 163 (255)
T COG0024 84 KKVLKEGDIVKIDVGAHIDGYIGDTAITFVVGEVSDEDAKRLLEATKEALYAGIEAVKPGARLGDIGRAIQEYAESRGFS 163 (255)
T ss_pred CcccCCCCEEEEEEEEEECCeeeeEEEEEECCCCChHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCE
Confidence 57899999999999999999999999999999766 57777999999999999999999999999999999999999999
Q ss_pred ccCCceeeccCCccccCCccccCCCC-CCccccCCcEEEEccceecCcccccccC-CCCeeeecCCCceEEEEEEEEEeC
Q 017786 280 VVERFVGHGVGKVFHSEPIIYHNRNE-NPGCMVEGQTFTIEPILTMGSIECITWP-DNWTTLTADGNPAAQFEHTILITR 357 (366)
Q Consensus 280 ~~~~~~GHgIG~~~he~P~i~~~~~~-~~~~l~~GmvftiEP~i~~~~~~~~~~~-d~wt~~t~dg~~~a~~EdtvlVTe 357 (366)
+++.|+|||||..+|+.|.|+++.++ ...+|++||||+|||+++.+......|+ |+|+++|.|++.++||||||+||+
T Consensus 164 vVr~~~GHgig~~~He~p~ip~y~~~~~~~~l~~Gmv~aIEPmi~~G~~~~~~~~~d~Wt~~t~d~~~~aq~EHTv~Vt~ 243 (255)
T COG0024 164 VVRNLTGHGIGRELHEEPSIPNYGKDGTGVRLKEGMVFAIEPMINTGSGEVVEGPSDRWTLVTKDGSLSAQFEHTVIVTE 243 (255)
T ss_pred EeecccCCccCcccCCCCeeccccCCCCCcccCCCCEEEEeeEEEcCCCceEecCCCCeEEEeCCCCEEeEEEEEEEEeC
Confidence 99999999999999999999997553 3469999999999999999999999998 999999999999999999999999
Q ss_pred CceEeCCC
Q 017786 358 TGAEILTI 365 (366)
Q Consensus 358 dG~EiLT~ 365 (366)
+|+|+||.
T Consensus 244 ~g~eilT~ 251 (255)
T COG0024 244 DGCEILTL 251 (255)
T ss_pred CCcEEeeC
Confidence 99999995
No 4
>PRK12897 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=3e-57 Score=423.23 Aligned_cols=246 Identities=37% Similarity=0.592 Sum_probs=233.3
Q ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHHhHhccCCccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCeeeecCCCCcccCCCC
Q 017786 121 YQIHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPD 200 (366)
Q Consensus 121 R~iKs~~EI~~~R~A~~ia~~~l~~~~~~i~pGvTe~ei~~~~~~~~~~~G~~ps~~~~~~fp~~v~~g~n~~~~h~~p~ 200 (366)
..|||++||++||+|+++++++++++.+.++||+||.||++.+++.+.++|+.....+|.+||.++|+|.|+..+|+.|+
T Consensus 2 ~~iKs~~EI~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~~G~~~~~~~~~~~~~~i~~g~n~~~~H~~p~ 81 (248)
T PRK12897 2 ITIKTKNEIDLMHESGKLLASCHREIAKIMKPGITTKEINTFVEAYLEKHGATSEQKGYNGYPYAICASVNDEMCHAFPA 81 (248)
T ss_pred ceeCCHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccCCCCcceEeccCCEeecCCCC
Confidence 36999999999999999999999999999999999999999999999999998766667789999999999999999999
Q ss_pred CCCCCCCCEEEEEeccccCcEEeceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCc
Q 017786 201 SRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGV 280 (366)
Q Consensus 201 ~~~l~~GDiv~iD~g~~~~GY~~D~sRT~~vG~~~~e~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~ai~~~~~~~G~~~ 280 (366)
+++|++||+|.+|+++.++||++|++|||++|+++++++++|++++++++++++++|||++++||++++++++++.||..
T Consensus 82 ~~~l~~Gd~V~iD~g~~~~GY~sD~tRT~~vG~~s~~~~~~~~~~~~a~~~~i~~~kpG~~~~dv~~a~~~~~~~~g~~~ 161 (248)
T PRK12897 82 DVPLTEGDIVTIDMVVNLNGGLSDSAWTYRVGKVSDEAEKLLLVAENALYKGIDQAVIGNRVGDIGYAIESYVANEGFSV 161 (248)
T ss_pred CcccCCCCEEEEEeeEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHcCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cCCceeeccCCccccCCccccCC-CCCCccccCCcEEEEccceecCcccccccCCCCeeeecCCCceEEEEEEEEEeCCc
Q 017786 281 VERFVGHGVGKVFHSEPIIYHNR-NENPGCMVEGQTFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHTILITRTG 359 (366)
Q Consensus 281 ~~~~~GHgIG~~~he~P~i~~~~-~~~~~~l~~GmvftiEP~i~~~~~~~~~~~d~wt~~t~dg~~~a~~EdtvlVTedG 359 (366)
..+++|||||+.+||.|.+.++. .+++.+|++||||+|||++|.+......|.|+|++.|.||.+|+|+||||+||++|
T Consensus 162 ~~~~~GHgiGl~~hE~P~i~~~~~~~~~~~l~~Gmv~tiEP~~~~~~~~~~~~~~~~~~~~~~g~~g~r~edtv~Vt~~G 241 (248)
T PRK12897 162 ARDFTGHGIGKEIHEEPAIFHFGKQGQGPELQEGMVITIEPIVNVGMRYSKVDLNGWTARTMDGKLSAQYEHTIAITKDG 241 (248)
T ss_pred CCCeEECccCCcccCCCccCCCCCCCCCCCcCCCCEEEECCeEecCCCceEECCCCcEEEcCCCCeEeecceEEEEeCCc
Confidence 88999999999999999987543 34567999999999999999988888889999999999999999999999999999
Q ss_pred eEeCCCC
Q 017786 360 AEILTIC 366 (366)
Q Consensus 360 ~EiLT~~ 366 (366)
+|+||++
T Consensus 242 ~e~lt~~ 248 (248)
T PRK12897 242 PIILTKL 248 (248)
T ss_pred cEEeecC
Confidence 9999974
No 5
>PRK12318 methionine aminopeptidase; Provisional
Probab=100.00 E-value=1.3e-56 Score=427.21 Aligned_cols=245 Identities=46% Similarity=0.800 Sum_probs=231.0
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHhHhccCCccHHHHHHHHHHHHHHhCCCCCCCCCC--CCCCeeeecCCCCcccCCC
Q 017786 122 QIHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYG--GFPKSVCTSVNECMCHGIP 199 (366)
Q Consensus 122 ~iKs~~EI~~~R~A~~ia~~~l~~~~~~i~pGvTe~ei~~~~~~~~~~~G~~ps~~~~~--~fp~~v~~g~n~~~~h~~p 199 (366)
.|||++||++||+|+++++++++++.+.++||+||.||++++++.+.+.|+.|+.++|. +||.++|+|.|+.++|+.|
T Consensus 42 ~IKs~~EIe~~R~Aa~I~~~a~~a~~~~irpG~tE~Eiaa~~~~~~~~~G~~~~~~~~~~~~f~~~v~~g~n~~~~H~~p 121 (291)
T PRK12318 42 IIKTPEQIEKIRKACQVTARILDALCEAAKEGVTTNELDELSRELHKEYNAIPAPLNYGSPPFPKTICTSLNEVICHGIP 121 (291)
T ss_pred EECCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCccccccCCCCCCcceEeeccceeecCCC
Confidence 59999999999999999999999999999999999999999999999999988877775 5999999999999999999
Q ss_pred CCCCCCCCCEEEEEeccccCcEEeceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCC
Q 017786 200 DSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFG 279 (366)
Q Consensus 200 ~~~~l~~GDiv~iD~g~~~~GY~~D~sRT~~vG~~~~e~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~ai~~~~~~~G~~ 279 (366)
++++|++||+|.+|+++.++||++|++|||++|+++++++++++++.++++++++.+|||++++||+++++++++++||.
T Consensus 122 ~~~~l~~GD~V~vD~g~~~~GY~aDitRT~~vG~~~~~~~~~~~~~~~a~~~~i~~~rpG~~~~dv~~a~~~~~~~~G~~ 201 (291)
T PRK12318 122 NDIPLKNGDIMNIDVSCIVDGYYGDCSRMVMIGEVSEIKKKVCQASLECLNAAIAILKPGIPLYEIGEVIENCADKYGFS 201 (291)
T ss_pred CCCccCCCCEEEEEEeEEECcEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCceeeccCCccccCCccccCCCCCCccccCCcEEEEccceecCccccccc-CCCCeeeecCCCceEEEEEEEEEeCC
Q 017786 280 VVERFVGHGVGKVFHSEPIIYHNRNENPGCMVEGQTFTIEPILTMGSIECITW-PDNWTTLTADGNPAAQFEHTILITRT 358 (366)
Q Consensus 280 ~~~~~~GHgIG~~~he~P~i~~~~~~~~~~l~~GmvftiEP~i~~~~~~~~~~-~d~wt~~t~dg~~~a~~EdtvlVTed 358 (366)
.+.+++|||||+.+||.|.+..+.++++.+|++||||+|||++|.+....+.+ .|+|++.+.||..++++||||+||++
T Consensus 202 ~~~~~~GHgIGl~~hE~P~i~~~~~~~~~~L~~GMV~~iEP~i~~~~~~g~~~~~~~~~~~~~~g~~~~~~edtv~VTe~ 281 (291)
T PRK12318 202 VVDQFVGHGVGIKFHENPYVPHHRNSSKIPLAPGMIFTIEPMINVGKKEGVIDPINHWEARTCDNQPSAQWEHTILITET 281 (291)
T ss_pred cCCCcccCCcCccccCCCcccCcCCCCCCEeCCCCEEEECCEEEcCCCceEEecCCCcEEEecCCCeeeeeeeEEEEcCC
Confidence 87889999999999999998765555678999999999999999987666555 48999999999999999999999999
Q ss_pred ceEeCCCC
Q 017786 359 GAEILTIC 366 (366)
Q Consensus 359 G~EiLT~~ 366 (366)
|+|+||.+
T Consensus 282 G~e~LT~~ 289 (291)
T PRK12318 282 GYEILTLL 289 (291)
T ss_pred cceeCCCC
Confidence 99999975
No 6
>PRK07281 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=1.1e-56 Score=425.68 Aligned_cols=246 Identities=30% Similarity=0.519 Sum_probs=229.3
Q ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHHhHhccCCccHHHHHHHHHHHHHHhCCCCCCCCC----CCCCCeeeecCCCCccc
Q 017786 121 YQIHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGY----GGFPKSVCTSVNECMCH 196 (366)
Q Consensus 121 R~iKs~~EI~~~R~A~~ia~~~l~~~~~~i~pGvTe~ei~~~~~~~~~~~G~~ps~~~~----~~fp~~v~~g~n~~~~h 196 (366)
..|||++||++||+|+++++++++++.+.++||+||.||++.++..+.++|+.|..+++ .+||.++|+|.|+.++|
T Consensus 2 ~~iKs~~EI~~mr~A~~i~~~~~~~~~~~i~pG~te~ei~~~~~~~~~~~g~~~~~~G~~~~~~~f~~~v~~G~n~~~~H 81 (286)
T PRK07281 2 ITLKSAREIEAMDRAGDFLASIHIGLRDLIKPGVDMWEVEEYVRRRCKEENVLPLQIGVDGAMMDYPYATCCGLNDEVAH 81 (286)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHHcCCcccccCCCCcccCCCcceEEeccccccC
Confidence 46999999999999999999999999999999999999999999999999999877765 45999999999999999
Q ss_pred CCCCCCCCCCCCEEEEEecc---------------------------ccCcEEeceeeEEEccCCCHHHHHHHHHHHHHH
Q 017786 197 GIPDSRQLQDGDIINIDVTV---------------------------YLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECL 249 (366)
Q Consensus 197 ~~p~~~~l~~GDiv~iD~g~---------------------------~~~GY~~D~sRT~~vG~~~~e~~~l~~~~~ea~ 249 (366)
+.|++++|++||+|+||+++ .|+||++|++|||++|+++++++++++++++++
T Consensus 82 ~~p~~~~l~~Gd~v~iD~g~~~~~~~y~~d~~~~~~~~~~~~~~~~~~~~gy~~D~~rT~~vG~~~~~~~~l~~~~~ea~ 161 (286)
T PRK07281 82 AFPRHYILKEGDLLKVDMVLSEPLDKSIVDVSKLNFDNVEQMKKYTESYRGGLADSCWAYAVGTPSDEVKNLMDVTKEAM 161 (286)
T ss_pred CCCCCcCcCCCCEEEEEecccccccccccccccccccccccccccccccCCEEeeeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999997 489999999999999999999999999999999
Q ss_pred HHHHHhcCCCCcHHHHHHHHHHHHHHcCCCccCCceeeccCCccccCCccccCC-CCCCccccCCcEEEEccceecCccc
Q 017786 250 EKGIAVCKDGASFKKIGKRISEHAEKYGFGVVERFVGHGVGKVFHSEPIIYHNR-NENPGCMVEGQTFTIEPILTMGSIE 328 (366)
Q Consensus 250 ~~ai~~~kPG~~~~dI~~ai~~~~~~~G~~~~~~~~GHgIG~~~he~P~i~~~~-~~~~~~l~~GmvftiEP~i~~~~~~ 328 (366)
+++++.+|||++++||+++++++++++||..+.+++|||||+.+||.|.+.++. .+.+.+|++||||+|||++|.+...
T Consensus 162 ~~ai~~~kpG~~~~di~~a~~~~~~~~G~~~~~~~~GHGIGl~~hE~P~i~~~~~~~~~~~Le~GMV~tiEPgiy~~~~~ 241 (286)
T PRK07281 162 YRGIEQAVVGNRIGDIGAAIQEYAESRGYGVVRDLVGHGVGPTMHEEPMVPNYGTAGRGLRLREGMVLTIEPMINTGTWE 241 (286)
T ss_pred HHHHHHhcCCCcHHHHHHHHHHHHHHcCCccCCCeeeeeCCCccCCCCcCCCcccCCCCCEECCCCEEEECCeeEcCCcc
Confidence 999999999999999999999999999999888999999999999999986542 3467799999999999999987654
Q ss_pred cc-ccCCCCeeeecCCCceEEEEEEEEEeCCceEeCCCC
Q 017786 329 CI-TWPDNWTTLTADGNPAAQFEHTILITRTGAEILTIC 366 (366)
Q Consensus 329 ~~-~~~d~wt~~t~dg~~~a~~EdtvlVTedG~EiLT~~ 366 (366)
.. .++|+|++.+.||+.++|+||||+||++|+|+||.+
T Consensus 242 ~~~~~~~gw~~~~~~g~~gvr~EdtvlVT~~G~e~LT~~ 280 (286)
T PRK07281 242 IDTDMKTGWAHKTLDGGLSCQYEHQFVITKDGPVILTSQ 280 (286)
T ss_pred eecccCCCceEEecCCCcEEEeccEEEEeCCcceECCCC
Confidence 44 468999999999999999999999999999999963
No 7
>PRK12896 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=3.5e-55 Score=410.52 Aligned_cols=247 Identities=43% Similarity=0.733 Sum_probs=233.6
Q ss_pred ccccCCCHHHHHHHHHHHHHHHHHHHHHhHhccCCccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCeeeecCCCCcccCC
Q 017786 119 PEYQIHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGI 198 (366)
Q Consensus 119 ~~R~iKs~~EI~~~R~A~~ia~~~l~~~~~~i~pGvTe~ei~~~~~~~~~~~G~~ps~~~~~~fp~~v~~g~n~~~~h~~ 198 (366)
+.+.|||++||++||+|+++++++++++.+.++||+||.||+..+++.+.++|+.+++..+.+||..+|+|.|...+|+.
T Consensus 6 ~~~~vKs~~Ei~~~r~a~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~n~~~~h~~ 85 (255)
T PRK12896 6 RGMEIKSPRELEKMRKIGRIVATALKEMGKAVEPGMTTKELDRIAEKRLEEHGAIPSPEGYYGFPGSTCISVNEEVAHGI 85 (255)
T ss_pred CceeECCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHCCCEeCcccCCCCCcceEecCCCeeEecC
Confidence 45689999999999999999999999999999999999999999999999999998877788899999999999999999
Q ss_pred CCCCCCCCCCEEEEEeccccCcEEeceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCC
Q 017786 199 PDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGF 278 (366)
Q Consensus 199 p~~~~l~~GDiv~iD~g~~~~GY~~D~sRT~~vG~~~~e~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~ai~~~~~~~G~ 278 (366)
|++++|++||+|.+|+++.++||++|++|||++|++++++++++++++++++++++.+|||++++||++++++++++.||
T Consensus 86 p~~~~l~~Gd~v~iD~g~~~~gY~aD~~RT~~vG~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~~G~ 165 (255)
T PRK12896 86 PGPRVIKDGDLVNIDVSAYLDGYHGDTGITFAVGPVSEEAEKLCRVAEEALWAGIKQVKAGRPLNDIGRAIEDFAKKNGY 165 (255)
T ss_pred CCCccCCCCCEEEEEEeEEECcEEEeeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCceeeccCCccccCCcccc-C-CCCCCccccCCcEEEEccceecCcccccccCCCCeeeecCCCceEEEEEEEEEe
Q 017786 279 GVVERFVGHGVGKVFHSEPIIYH-N-RNENPGCMVEGQTFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHTILIT 356 (366)
Q Consensus 279 ~~~~~~~GHgIG~~~he~P~i~~-~-~~~~~~~l~~GmvftiEP~i~~~~~~~~~~~d~wt~~t~dg~~~a~~EdtvlVT 356 (366)
....+++|||||+.+||.|.+.. + ..+++.+|++||||+|||+++.+..+...|+|+|++.+.+|.+++|+||||+||
T Consensus 166 ~~~~~~~GHgiG~~~he~p~~~~~~~~~~~~~~le~GmV~~iEp~i~~g~~~~~~~~~~~~~~~~~~~~~~~~edtv~vt 245 (255)
T PRK12896 166 SVVRDLTGHGVGRSLHEEPSVILTYTDPLPNRLLRPGMTLAVEPFLNLGAKDAETLDDGWTVVTPDKSLSAQFEHTVVVT 245 (255)
T ss_pred EeccCcccCCcCcccccCCCccccCCCCCCCCEecCCcEEEEeceEEcCCCceEEcCCCCEEEecCCCeEEEEEEEEEEc
Confidence 87788999999999999995543 2 234578999999999999999998888999999999999999999999999999
Q ss_pred CCceEeCCC
Q 017786 357 RTGAEILTI 365 (366)
Q Consensus 357 edG~EiLT~ 365 (366)
++|+|+||+
T Consensus 246 ~~G~e~Lt~ 254 (255)
T PRK12896 246 RDGPEILTD 254 (255)
T ss_pred CCcceecCC
Confidence 999999996
No 8
>TIGR00500 met_pdase_I methionine aminopeptidase, type I. Methionine aminopeptidase is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. This model describes type I. The role of this protein in general is to produce the mature form of cytosolic proteins by removing the N-terminal methionine.
Probab=100.00 E-value=1.6e-54 Score=404.45 Aligned_cols=244 Identities=48% Similarity=0.757 Sum_probs=231.5
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHhHhccCCccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCeeeecCCCCcccCCCCC
Q 017786 122 QIHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDS 201 (366)
Q Consensus 122 ~iKs~~EI~~~R~A~~ia~~~l~~~~~~i~pGvTe~ei~~~~~~~~~~~G~~ps~~~~~~fp~~v~~g~n~~~~h~~p~~ 201 (366)
+|||++||++||+|+++++++++++.+.++||+||.||++.+++.+.++|+.+.+.++.+||..+++|.|...+|+.|++
T Consensus 2 ~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~~G~tE~el~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~n~~~~H~~~~~ 81 (247)
T TIGR00500 2 SLKSPDEIEKIRKAGRLAAEVLEELEREVKPGVSTKELDRIAKDFIEKHGAKPAFLGYYGFPGSVCISVNEVVIHGIPDK 81 (247)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCCccccCCCCCCceeEeccccEEEecCCCC
Confidence 69999999999999999999999999999999999999999999999999998777777899999999999999999999
Q ss_pred CCCCCCCEEEEEeccccCcEEeceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCcc
Q 017786 202 RQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGVV 281 (366)
Q Consensus 202 ~~l~~GDiv~iD~g~~~~GY~~D~sRT~~vG~~~~e~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~ai~~~~~~~G~~~~ 281 (366)
++|++||+|.+|+++.|+||++|++|||++|+++++++++|+++.++++++++.+|||++++||+++++++++++||...
T Consensus 82 ~~l~~Gd~v~iD~g~~~~gY~aD~~RT~~vG~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~~g~~~~ 161 (247)
T TIGR00500 82 KVLKDGDIVNIDVGVIYDGYHGDTAKTFLVGKISPEAEKLLECTEESLYKAIEEAKPGNRIGEIGAAIQKYAEAKGFSVV 161 (247)
T ss_pred cccCCCCEEEEEEEEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred CCceeeccCCccccCCccccCC-CCCCccccCCcEEEEccceecCcccccccCCCCeeeecCCCceEEEEEEEEEeCCce
Q 017786 282 ERFVGHGVGKVFHSEPIIYHNR-NENPGCMVEGQTFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHTILITRTGA 360 (366)
Q Consensus 282 ~~~~GHgIG~~~he~P~i~~~~-~~~~~~l~~GmvftiEP~i~~~~~~~~~~~d~wt~~t~dg~~~a~~EdtvlVTedG~ 360 (366)
.+++|||||+.+||.|.+..+. .+++.+|++||||+|||++|.+......+.++|++.+++|.+++++||||+||++|+
T Consensus 162 ~~~~GHgiG~~~~e~p~i~~~~~~~~~~~l~~gmv~~iEp~i~~~~~~~~~~~~~~~~~~~~~~~g~ried~v~Vt~~G~ 241 (247)
T TIGR00500 162 REYCGHGIGRKFHEEPQIPNYGKKFTNVRLKEGMVFTIEPMVNTGTEEITTAADGWTVKTKDGSLSAQFEHTIVITDNGP 241 (247)
T ss_pred cCccCCccCcccCCCCccCCcCcCCCCCEecCCCEEEEeeEEEcCCCcEEECCCCCEEEccCCCeEEEEeEEEEEcCCcc
Confidence 8899999999999999876542 345789999999999999999887777889999999999999999999999999999
Q ss_pred EeCCC
Q 017786 361 EILTI 365 (366)
Q Consensus 361 EiLT~ 365 (366)
|+||.
T Consensus 242 e~Lt~ 246 (247)
T TIGR00500 242 EILTE 246 (247)
T ss_pred EEccC
Confidence 99995
No 9
>PRK05716 methionine aminopeptidase; Validated
Probab=100.00 E-value=4.5e-54 Score=402.30 Aligned_cols=246 Identities=50% Similarity=0.819 Sum_probs=232.8
Q ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHHhHhccCCccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCeeeecCCCCcccCCCC
Q 017786 121 YQIHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPD 200 (366)
Q Consensus 121 R~iKs~~EI~~~R~A~~ia~~~l~~~~~~i~pGvTe~ei~~~~~~~~~~~G~~ps~~~~~~fp~~v~~g~n~~~~h~~p~ 200 (366)
..|||++||+.||+|+++++++++++.+.++||+||.||++.+++.+.++|+.+.+.++.+|+..+++|.|+..+|+.|+
T Consensus 3 ~~iKs~~Ei~~~r~A~~i~~~~~~~a~~~i~pG~se~ela~~~~~~~~~~G~~~~~~~~~~~~~~~~~g~~~~~~h~~~~ 82 (252)
T PRK05716 3 ITIKTPEEIEKMRVAGRLAAEVLDEIEPHVKPGVTTKELDRIAEEYIRDQGAIPAPLGYHGFPKSICTSVNEVVCHGIPS 82 (252)
T ss_pred eeeCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHCCCEecccCCCCCCcCeEecccceeecCCCC
Confidence 57999999999999999999999999999999999999999999999999998877677789889999999999999999
Q ss_pred CCCCCCCCEEEEEeccccCcEEeceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCc
Q 017786 201 SRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGV 280 (366)
Q Consensus 201 ~~~l~~GDiv~iD~g~~~~GY~~D~sRT~~vG~~~~e~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~ai~~~~~~~G~~~ 280 (366)
+++|++||+|.+|+++.++||++|++|||++|+++++++++++++.++++++++++|||++++||+++++++++++|+..
T Consensus 83 ~~~l~~Gd~v~id~g~~~~gY~~d~~RT~~vG~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~dv~~~~~~~~~~~g~~~ 162 (252)
T PRK05716 83 DKVLKEGDIVNIDVTVIKDGYHGDTSRTFGVGEISPEDKRLCEVTKEALYLGIAAVKPGARLGDIGHAIQKYAEAEGFSV 162 (252)
T ss_pred CcccCCCCEEEEEEEEEECCEEEEeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred cCCceeeccCCccccCCccccC-CCCCCccccCCcEEEEccceecCcccccccCCCCeeeecCCCceEEEEEEEEEeCCc
Q 017786 281 VERFVGHGVGKVFHSEPIIYHN-RNENPGCMVEGQTFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHTILITRTG 359 (366)
Q Consensus 281 ~~~~~GHgIG~~~he~P~i~~~-~~~~~~~l~~GmvftiEP~i~~~~~~~~~~~d~wt~~t~dg~~~a~~EdtvlVTedG 359 (366)
..+++|||||+.+||.|.+..+ ..+++.+|++||||+|||+++.+......|+|+|++.+++|.+++++||||+||++|
T Consensus 163 ~~~~~GHgiG~~~~e~p~~~~~~~~~~~~~le~Gmv~~vEp~i~~~~~~~~~~~~~~~~~~~~g~~g~~~ed~v~Vt~~G 242 (252)
T PRK05716 163 VREYCGHGIGRKFHEEPQIPHYGAPGDGPVLKEGMVFTIEPMINAGKREVKTLKDGWTVVTKDGSLSAQYEHTVAVTEDG 242 (252)
T ss_pred ecCccccccCCccCCCCccCcCCCCCCCCEecCCCEEEEccEEEcCCCceEEcCCCCEEEccCCCcEEeeeeEEEEcCCc
Confidence 7889999999999999987654 345678999999999999999988888899999999999999999999999999999
Q ss_pred eEeCCCC
Q 017786 360 AEILTIC 366 (366)
Q Consensus 360 ~EiLT~~ 366 (366)
+|+||.+
T Consensus 243 ~e~Lt~~ 249 (252)
T PRK05716 243 PEILTLR 249 (252)
T ss_pred cEEeeCC
Confidence 9999964
No 10
>cd01086 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=100.00 E-value=1.6e-50 Score=375.16 Aligned_cols=237 Identities=54% Similarity=0.920 Sum_probs=224.5
Q ss_pred HHHHHHHHHHHHHHHHHHhHhccCCccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCeeeecCCCCcccCCCCCCCCCCCC
Q 017786 129 IAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGD 208 (366)
Q Consensus 129 I~~~R~A~~ia~~~l~~~~~~i~pGvTe~ei~~~~~~~~~~~G~~ps~~~~~~fp~~v~~g~n~~~~h~~p~~~~l~~GD 208 (366)
|++||+|+++++++++++.+.++||+||.||++.+.+.+.++|+.+.+.++.+||..+++|.|+..+|+.|++++|++||
T Consensus 1 I~~lr~A~~i~~~~~~~~~~~~~pG~tE~ev~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~l~~Gd 80 (238)
T cd01086 1 IEGMREAGRIVAEVLDELAKAIKPGVTTKELDQIAHEFIEEHGAYPAPLGYYGFPKSICTSVNEVVCHGIPDDRVLKDGD 80 (238)
T ss_pred CHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCcccccCCCCCcceecCCCCceeCCCCCCcccCCCC
Confidence 68999999999999999999999999999999999999999999988778888998999999999999999999999999
Q ss_pred EEEEEeccccCcEEeceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCccCCceeec
Q 017786 209 IINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGVVERFVGHG 288 (366)
Q Consensus 209 iv~iD~g~~~~GY~~D~sRT~~vG~~~~e~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~ai~~~~~~~G~~~~~~~~GHg 288 (366)
+|.+|+++.++||++|++|||++|+++++++++++.+.++++++++++|||++++||++++++++++.|+....+++|||
T Consensus 81 ~v~id~g~~~~GY~ad~~RT~~~G~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~v~~~~~~~~~~~G~~~~~~~~GHg 160 (238)
T cd01086 81 IVNIDVGVELDGYHGDSARTFIVGEVSEEAKKLVEVTEEALYKGIEAVKPGNRIGDIGHAIEKYAEKNGYSVVREFGGHG 160 (238)
T ss_pred EEEEEEEEEECCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCcceecCccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998778899999
Q ss_pred cCCccccCCcccc-CCCCCCccccCCcEEEEccceecCcccccccCCCCeeeecCCCceEEEEEEEEEeCCceEeCCC
Q 017786 289 VGKVFHSEPIIYH-NRNENPGCMVEGQTFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHTILITRTGAEILTI 365 (366)
Q Consensus 289 IG~~~he~P~i~~-~~~~~~~~l~~GmvftiEP~i~~~~~~~~~~~d~wt~~t~dg~~~a~~EdtvlVTedG~EiLT~ 365 (366)
||+.+||.|.+.. ...+++.+|++||||++||++|.+......|+++|++.+.+|.+++++||||+||+||+|+||+
T Consensus 161 iG~~~~e~p~~~~~~~~~~~~~le~Gmv~~iep~i~~~~~~~~~~~~~~~~~~~~g~~g~~~edtv~Vte~G~e~Lt~ 238 (238)
T cd01086 161 IGRKFHEEPQIPNYGRPGTGPKLKPGMVFTIEPMINLGTYEVVTLPDGWTVVTKDGSLSAQFEHTVLITEDGPEILTL 238 (238)
T ss_pred CCCccccCCCcCCccCCCCCCEecCCCEEEEeeEEECCCCceEECCCCCEEEcCCCCEEEeeeeEEEEcCCcceeCCC
Confidence 9999999998762 2235678999999999999999988888889999999999999999999999999999999985
No 11
>PRK09795 aminopeptidase; Provisional
Probab=100.00 E-value=7e-50 Score=392.82 Aligned_cols=225 Identities=21% Similarity=0.392 Sum_probs=208.8
Q ss_pred CCccccCCCHHHHHHHHHHHHHHHHHHHHHhHhccCCccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCeeeecCCCCccc
Q 017786 117 LSPEYQIHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCH 196 (366)
Q Consensus 117 l~~~R~iKs~~EI~~~R~A~~ia~~~l~~~~~~i~pGvTe~ei~~~~~~~~~~~G~~ps~~~~~~fp~~v~~g~n~~~~h 196 (366)
+.++|+|||++||++||+|+++++++++++.+.++||+||.||++.++..+.++|+.+. +|+++|++|.|...+|
T Consensus 121 ~~~lR~iKs~~Ei~~~r~a~~i~~~~~~~~~~~i~~G~tE~e~~~~~~~~~~~~G~~~~-----~f~~iv~sG~~~~~ph 195 (361)
T PRK09795 121 PDVLRQIKTPEEVEKIRLACGIADRGAEHIRRFIQAGMSEREIAAELEWFMRQQGAEKA-----SFDTIVASGWRGALPH 195 (361)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHCCCCcC-----CCCeEEEEeccccccC
Confidence 67899999999999999999999999999999999999999999999999999998763 5889999999999999
Q ss_pred CCCCCCCCCCCCEEEEEeccccCcEEeceeeEEEccC--CCHH---HHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHH
Q 017786 197 GIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGN--VSDG---LKRLVKVTEECLEKGIAVCKDGASFKKIGKRISE 271 (366)
Q Consensus 197 ~~p~~~~l~~GDiv~iD~g~~~~GY~~D~sRT~~vG~--~~~e---~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~ai~~ 271 (366)
+.|++++|++||+|++|+|+.|+||++|++|||++|. ++++ ++++|+.+.++++++++++|||++++||++++++
T Consensus 196 ~~~~~~~l~~gd~v~~d~g~~~~gY~sd~tRt~~~g~~~~~~~~~~~~~~~~~v~~a~~~~~~~~rpG~~~~~v~~~~~~ 275 (361)
T PRK09795 196 GKASDKIVAAGEFVTLDFGALYQGYCSDMTRTLLVNGEGVSAESHPLFNVYQIVLQAQLAAISAIRPGVRCQQVDDAARR 275 (361)
T ss_pred CCCCCceecCCCEEEEEeccccCCEeecceEEEEeCCcCCchhHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHH
Confidence 9999999999999999999999999999999999963 3333 7899999999999999999999999999999999
Q ss_pred HHHHcCCCc-cCCceeeccCCccccCCccccCCCCCCccccCCcEEEEccceecCcccccccCCCCeeeecCCCceEEEE
Q 017786 272 HAEKYGFGV-VERFVGHGVGKVFHSEPIIYHNRNENPGCMVEGQTFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFE 350 (366)
Q Consensus 272 ~~~~~G~~~-~~~~~GHgIG~~~he~P~i~~~~~~~~~~l~~GmvftiEP~i~~~~~~~~~~~d~wt~~t~dg~~~a~~E 350 (366)
++++.||.. +.|.+|||||+.+||.|.+.. +++.+|++||||+|||++|.+ |.+|+++|
T Consensus 276 ~~~~~g~~~~~~h~~GHgiGl~~he~p~i~~---~~~~~l~~gmv~~iEpgiy~~-----------------~~~gvriE 335 (361)
T PRK09795 276 VITEAGYGDYFGHNTGHAIGIEVHEDPRFSP---RDTTTLQPGMLLTVEPGIYLP-----------------GQGGVRIE 335 (361)
T ss_pred HHHHcCCCccCCCCCCccCCccccCCCCcCC---CCCCCcCCCCEEEECCEEEeC-----------------CCCEEEEe
Confidence 999999986 478899999999999998854 467899999999999999975 44689999
Q ss_pred EEEEEeCCceEeCCCC
Q 017786 351 HTILITRTGAEILTIC 366 (366)
Q Consensus 351 dtvlVTedG~EiLT~~ 366 (366)
|||+||++|+|+||++
T Consensus 336 d~v~vt~~G~e~Lt~~ 351 (361)
T PRK09795 336 DVVLVTPQGAEVLYAM 351 (361)
T ss_pred eEEEECCCCcEeCcCC
Confidence 9999999999999974
No 12
>PRK15173 peptidase; Provisional
Probab=100.00 E-value=8.6e-48 Score=372.12 Aligned_cols=230 Identities=20% Similarity=0.309 Sum_probs=206.1
Q ss_pred CCCCCCCCccccCCCHHHHHHHHHHHHHHHHHHHHHhHhccCCccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCeeeecC
Q 017786 111 STSLPDLSPEYQIHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSV 190 (366)
Q Consensus 111 ~~~~~~l~~~R~iKs~~EI~~~R~A~~ia~~~l~~~~~~i~pGvTe~ei~~~~~~~~~~~G~~ps~~~~~~fp~~v~~g~ 190 (366)
.+..+.+.++|+|||++||+.||+|+++++++++++.+.++||+||.||++.++.++.+.|... +..| .++.+|.
T Consensus 83 ~d~~~~i~~lR~iKs~~EI~~mr~A~~i~~~~~~~~~~~i~~G~tE~el~a~~~~~~~~~g~~~----~~~~-~~i~~G~ 157 (323)
T PRK15173 83 VDSSSIFNELRVIKSPWEIKRLRKSAEITEYGITEASKLIRVGCTSAELTAAYKAAVMSKSETH----FSRF-HLISVGA 157 (323)
T ss_pred EEhHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCC----CCCC-cEEEECC
Confidence 4556678899999999999999999999999999999999999999999999998888876532 1223 3566676
Q ss_pred CCCcccCCCCCCCCCCCCEEEEEeccccCcEEeceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHH
Q 017786 191 NECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRIS 270 (366)
Q Consensus 191 n~~~~h~~p~~~~l~~GDiv~iD~g~~~~GY~~D~sRT~~vG~~~~e~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~ai~ 270 (366)
+ ..+|+.|+++++++||+|.+|+++.|+||++|++|||++|+++++++++|+++.++++++++++|||++++||+++++
T Consensus 158 ~-~~~h~~~~~~~l~~Gd~V~iD~g~~~~GY~aDitRT~~vG~p~~~~~~~y~~v~ea~~~~~~~irPG~~~~dv~~a~~ 236 (323)
T PRK15173 158 D-FSPKLIPSNTKACSGDLIKFDCGVDVDGYGADIARTFVVGEPPEITRKIYQTIRTGHEHMLSMVAPGVKMKDVFDSTM 236 (323)
T ss_pred C-CccCCCCCCCccCCCCEEEEEeCccCCCEeeeeEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHH
Confidence 6 568999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCc-cCCceeeccCC--ccccCCccccCCCCCCccccCCcEEEEccceecCcccccccCCCCeeeecCCCceE
Q 017786 271 EHAEKYGFGV-VERFVGHGVGK--VFHSEPIIYHNRNENPGCMVEGQTFTIEPILTMGSIECITWPDNWTTLTADGNPAA 347 (366)
Q Consensus 271 ~~~~~~G~~~-~~~~~GHgIG~--~~he~P~i~~~~~~~~~~l~~GmvftiEP~i~~~~~~~~~~~d~wt~~t~dg~~~a 347 (366)
+++++.|+.. ..+++|||||. .+||.|.+.. .++.+|++||||+|||++|.. +.+|+
T Consensus 237 ~~~~~~G~~~~~~~~~GHGiG~~lg~~E~P~i~~---~~~~~Le~GMV~tiEPgiy~~-----------------g~ggv 296 (323)
T PRK15173 237 EVIKKSGLPNYNRGHLGHGNGVFLGLEESPFVST---HATESFTSGMVLSLETPYYGY-----------------NLGSI 296 (323)
T ss_pred HHHHHcCCccccCCCCCCcCCCCCCcCCCCCCCC---CCCCccCCCCEEEECCEEEcC-----------------CCcEE
Confidence 9999999974 56789999996 7899999864 356799999999999999863 34689
Q ss_pred EEEEEEEEeCCceEeCCCC
Q 017786 348 QFEHTILITRTGAEILTIC 366 (366)
Q Consensus 348 ~~EdtvlVTedG~EiLT~~ 366 (366)
++||||+||++|+|+||++
T Consensus 297 riEDtvlVTe~G~e~LT~~ 315 (323)
T PRK15173 297 MIEDMILINKEGIEFLSKL 315 (323)
T ss_pred EEeeEEEEcCCcceeCCCC
Confidence 9999999999999999974
No 13
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=100.00 E-value=4.6e-48 Score=382.92 Aligned_cols=231 Identities=30% Similarity=0.436 Sum_probs=215.4
Q ss_pred cCCCCCCCCccccCCCHHHHHHHHHHHHHHHHHHHHHhHhccCCccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCeeeec
Q 017786 110 SSTSLPDLSPEYQIHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTS 189 (366)
Q Consensus 110 ~~~~~~~l~~~R~iKs~~EI~~~R~A~~ia~~~l~~~~~~i~pGvTe~ei~~~~~~~~~~~G~~ps~~~~~~fp~~v~~g 189 (366)
..+....+.++|+|||++||+.||+|+++++.++.++.+.++||+||.||.+.++..+.+.|+... +|+++|++|
T Consensus 141 ~~~~~~~i~~lR~iKs~~EI~~ir~A~~i~~~a~~~~~~~~~~g~tE~ev~a~l~~~~~~~G~~~~-----sf~~iv~~G 215 (384)
T COG0006 141 LVDASDLVDRLRLIKSPAEIAKIRKAAEIADAALEAALEAIRPGMTEAEIAAELEYALRKGGAEGP-----SFDTIVASG 215 (384)
T ss_pred EeccHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCCcc-----CcCcEEecc
Confidence 345566788899999999999999999999999999999999999999999999999999997642 589999999
Q ss_pred CCCCcccCCCCCCCCCCCCEEEEEeccccCcEEeceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHH
Q 017786 190 VNECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRI 269 (366)
Q Consensus 190 ~n~~~~h~~p~~~~l~~GDiv~iD~g~~~~GY~~D~sRT~~vG~~~~e~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~ai 269 (366)
.|.+.+|+.|+++++++||+|+||+|+.|+||++|+||||++|+++++++++|+.+.++++++++++|||+++++|++++
T Consensus 216 ~n~a~pH~~~~~~~~~~gd~vliD~G~~~~gY~sDiTRT~~~G~~~~~~~~iy~~V~~aq~aa~~~~rpG~~~~~vd~~a 295 (384)
T COG0006 216 ENAALPHYTPSDRKLRDGDLVLIDLGGVYNGYCSDITRTFPIGKPSDEQREIYEAVLEAQEAAIAAIRPGVTGGEVDAAA 295 (384)
T ss_pred ccccCcCCCCCcccccCCCEEEEEeeeEECCccccceeEEecCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCc-cCCceeeccC--CccccCCc-cccCCCCCCccccCCcEEEEccceecCcccccccCCCCeeeecCCCc
Q 017786 270 SEHAEKYGFGV-VERFVGHGVG--KVFHSEPI-IYHNRNENPGCMVEGQTFTIEPILTMGSIECITWPDNWTTLTADGNP 345 (366)
Q Consensus 270 ~~~~~~~G~~~-~~~~~GHgIG--~~~he~P~-i~~~~~~~~~~l~~GmvftiEP~i~~~~~~~~~~~d~wt~~t~dg~~ 345 (366)
++++.+.||.. +.|.+|||+| +.+||.|. +.. +...+|+|||||++||++|.+ |.+
T Consensus 296 r~~i~~~g~~~~~~h~~GHgvG~~l~vhE~p~~~~~---~~~~~L~~GMv~t~Epg~y~~-----------------g~~ 355 (384)
T COG0006 296 RQVLEKAGYGLYFLHGTGHGVGFVLDVHEHPQYLSP---GSDTTLEPGMVFSIEPGIYIP-----------------GGG 355 (384)
T ss_pred HHHHHhcCCcccccCCccccCCCCcccCcCccccCC---CCCccccCCcEEEeccccccC-----------------CCc
Confidence 99999988875 4667999999 99999994 543 467899999999999999875 678
Q ss_pred eEEEEEEEEEeCCceEeCCC
Q 017786 346 AAQFEHTILITRTGAEILTI 365 (366)
Q Consensus 346 ~a~~EdtvlVTedG~EiLT~ 365 (366)
|+++||+|+||++|+|+||.
T Consensus 356 GirIEd~vlVte~G~e~LT~ 375 (384)
T COG0006 356 GVRIEDTVLVTEDGFEVLTR 375 (384)
T ss_pred eEEEEEEEEEcCCCceeccc
Confidence 99999999999999999994
No 14
>PRK10879 proline aminopeptidase P II; Provisional
Probab=100.00 E-value=7e-48 Score=386.60 Aligned_cols=238 Identities=22% Similarity=0.318 Sum_probs=210.0
Q ss_pred CCCCCCCccccCCCHHHHHHHHHHHHHHHHHHHHHhHhccCCccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCeeeecCC
Q 017786 112 TSLPDLSPEYQIHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVN 191 (366)
Q Consensus 112 ~~~~~l~~~R~iKs~~EI~~~R~A~~ia~~~l~~~~~~i~pGvTe~ei~~~~~~~~~~~G~~ps~~~~~~fp~~v~~g~n 191 (366)
+..+.+.++|+|||++||+.||+|++++++++.++++.++||+||.||++.+...+.++|+... +|++++++|.|
T Consensus 162 d~~~~l~~lR~iKs~~EI~~~r~A~~i~~~a~~~~~~~~~pG~tE~ei~a~~~~~~~~~G~~~~-----~~~~iv~~G~n 236 (438)
T PRK10879 162 DWRPWVHEMRLFKSPEEIAVLRRAGEISALAHTRAMEKCRPGMFEYQLEGEIHHEFNRHGARYP-----SYNTIVGSGEN 236 (438)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHCCCCCC-----CCCcEEEEcCc
Confidence 4455677899999999999999999999999999999999999999999999999999997632 47889999999
Q ss_pred CCcccCCCCCCCCCCCCEEEEEeccccCcEEeceeeEEEc-cCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHH
Q 017786 192 ECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLC-GNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRIS 270 (366)
Q Consensus 192 ~~~~h~~p~~~~l~~GDiv~iD~g~~~~GY~~D~sRT~~v-G~~~~e~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~ai~ 270 (366)
.+.+|+.|++++|++||+|++|+|+.++||++|++|||++ |+++++++++|+++.++++++++.+|||+++++|++++.
T Consensus 237 a~~~H~~~~~~~l~~GDlVliD~G~~~~GY~sDitRT~~v~G~~s~~q~~~y~~vl~a~~aai~~~kpG~~~~~v~~~~~ 316 (438)
T PRK10879 237 GCILHYTENESEMRDGDLVLIDAGCEYKGYAGDITRTFPVNGKFTPAQREIYDIVLESLETSLRLYRPGTSIREVTGEVV 316 (438)
T ss_pred cccccCCCCccccCCCCEEEEEeCeEECCEEEEeEEEEEECCcCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHH
Confidence 9999999999999999999999999999999999999999 899999999999999999999999999999999999988
Q ss_pred HHHH------------------HcCCCc-cCCceeeccCCccccCCccccCCCCCCccccCCcEEEEccceecCcccccc
Q 017786 271 EHAE------------------KYGFGV-VERFVGHGVGKVFHSEPIIYHNRNENPGCMVEGQTFTIEPILTMGSIECIT 331 (366)
Q Consensus 271 ~~~~------------------~~G~~~-~~~~~GHgIG~~~he~P~i~~~~~~~~~~l~~GmvftiEP~i~~~~~~~~~ 331 (366)
+++. +.++.. +.|.+||+||+.+|+.|.+. .+++.+|++||||||||++|.+.
T Consensus 317 ~~~~~~l~~~Gl~~~~~~~~~~~~~~~~~~~Hg~GH~iGldvHd~~~~~---~~~~~~L~~GmV~tvEPgiY~~~----- 388 (438)
T PRK10879 317 RIMVSGLVKLGILKGDVDQLIAENAHRPFFMHGLSHWLGLDVHDVGVYG---QDRSRILEPGMVLTVEPGLYIAP----- 388 (438)
T ss_pred HHHHHHHHHhCCcCCCHHHHHHhccCccccCCCCccccCcCcCcCCCcC---CCCCCcCCCCCEEEECCEEEECC-----
Confidence 6643 334432 46779999999999988763 24567999999999999999863
Q ss_pred cCCCCeeeecCCCceEEEEEEEEEeCCceEeCCC
Q 017786 332 WPDNWTTLTADGNPAAQFEHTILITRTGAEILTI 365 (366)
Q Consensus 332 ~~d~wt~~t~dg~~~a~~EdtvlVTedG~EiLT~ 365 (366)
+|++.....++|+|+||||+||++|+|+||.
T Consensus 389 ---~~~~~~~~~~~GiRiED~VlVT~~G~e~LT~ 419 (438)
T PRK10879 389 ---DADVPEQYRGIGIRIEDDIVITETGNENLTA 419 (438)
T ss_pred ---CcCcccccCccEEEeccEEEECCCcCeEcCc
Confidence 2333333355799999999999999999995
No 15
>cd01090 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. Hydrolyzes creatine to sarcosine and urea.
Probab=100.00 E-value=5.6e-47 Score=349.60 Aligned_cols=224 Identities=21% Similarity=0.241 Sum_probs=197.0
Q ss_pred HHHHHHHHHHHHHHHHHHhHhccCCccHHHHHHHHHHHHHHhCCCCCC-CCCCCCCCeeeecCCCCcccCCCCCCCCCCC
Q 017786 129 IAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSP-LGYGGFPKSVCTSVNECMCHGIPDSRQLQDG 207 (366)
Q Consensus 129 I~~~R~A~~ia~~~l~~~~~~i~pGvTe~ei~~~~~~~~~~~G~~ps~-~~~~~fp~~v~~g~n~~~~h~~p~~~~l~~G 207 (366)
|++||+|+++++++++++.+.++||+||.||++.+++.+.+.|+...+ ..+.++.+++++|.|+..+|+.|++++|++|
T Consensus 1 I~~ir~Aa~i~d~~~~~~~~~i~pG~tE~ei~a~~~~~~~~~ga~~~~~~~~~~~~~~v~~G~~~~~~H~~~~~r~l~~G 80 (228)
T cd01090 1 IALIRHGARIADIGGAAVVEAIREGVPEYEVALAGTQAMVREIAKTFPEVELMDTWTWFQSGINTDGAHNPVTNRKVQRG 80 (228)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCccCCcccccCcceEEEeeccccccCCCCCCcccCCC
Confidence 689999999999999999999999999999999999999999875322 2233344678899999999999999999999
Q ss_pred CEEEEEeccccCcEEeceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCcc-CCcee
Q 017786 208 DIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGVV-ERFVG 286 (366)
Q Consensus 208 Div~iD~g~~~~GY~~D~sRT~~vG~~~~e~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~ai~~~~~~~G~~~~-~~~~G 286 (366)
|+|++|+++.++||++|++|||++|+++++++++++++.++++++++++|||++++||+++++++++++||... .+.+|
T Consensus 81 D~v~~d~g~~~~GY~ad~~RT~~vG~~~~~~~~~~~~~~ea~~~~~~~~rpG~~~~~v~~a~~~~~~~~G~~~~~~~~~G 160 (228)
T cd01090 81 DILSLNCFPMIAGYYTALERTLFLDEVSDAHLKIWEANVAVHERGLELIKPGARCKDIAAELNEMYREHDLLRYRTFGYG 160 (228)
T ss_pred CEEEEEEeEEECCEeeeeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCcccccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999864 45699
Q ss_pred eccCCccccCCcc--ccCCCCCCccccCCcEEEEccceecCcccccccCCCCeeeecCCCceEEEEEEEEEeCCceEeCC
Q 017786 287 HGVGKVFHSEPII--YHNRNENPGCMVEGQTFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHTILITRTGAEILT 364 (366)
Q Consensus 287 HgIG~~~he~P~i--~~~~~~~~~~l~~GmvftiEP~i~~~~~~~~~~~d~wt~~t~dg~~~a~~EdtvlVTedG~EiLT 364 (366)
||||+..|+.|.- .....+++.+|++||||+|||++|.+. + .+|.+|+++||||+||++|+|+||
T Consensus 161 HgiGl~~he~~~~~g~~~~~~~~~~Le~GMV~~iEP~i~~~~--------~-----~~g~gG~ried~v~Vt~~G~e~Lt 227 (228)
T cd01090 161 HSFGVLSHYYGREAGLELREDIDTVLEPGMVVSMEPMIMLPE--------G-----QPGAGGYREHDILVINENGAENIT 227 (228)
T ss_pred cccccccccCCCccccccCCCCCCccCCCCEEEECCEEeecc--------c-----CCCCcEEEeeeEEEECCCccccCc
Confidence 9999999987731 111234568999999999999998742 1 025679999999999999999998
Q ss_pred C
Q 017786 365 I 365 (366)
Q Consensus 365 ~ 365 (366)
.
T Consensus 228 ~ 228 (228)
T cd01090 228 G 228 (228)
T ss_pred C
Confidence 4
No 16
>PRK14575 putative peptidase; Provisional
Probab=100.00 E-value=4.1e-47 Score=378.15 Aligned_cols=231 Identities=20% Similarity=0.292 Sum_probs=207.9
Q ss_pred cCCCCCCCCccccCCCHHHHHHHHHHHHHHHHHHHHHhHhccCCccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCeeeec
Q 017786 110 SSTSLPDLSPEYQIHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTS 189 (366)
Q Consensus 110 ~~~~~~~l~~~R~iKs~~EI~~~R~A~~ia~~~l~~~~~~i~pGvTe~ei~~~~~~~~~~~G~~ps~~~~~~fp~~v~~g 189 (366)
..+..+.+.++|+|||++||++||+|+++++++++++.+.++||+||.||++.+++.+.+.|.... ..| .++.+|
T Consensus 165 ~~d~~~~l~~lR~iKs~~EI~~~r~A~~i~~~a~~~~~~~i~pG~tE~elaa~~~~~~~~~g~~~~----~~~-~~v~~G 239 (406)
T PRK14575 165 FVDSSSIFNELRVIKSPWEIKRLRKSAEITEYGITEASKLIRVGCTSAELTAAYKAAVMSKSETHF----SRF-HLISVG 239 (406)
T ss_pred EEEcHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCcC----CcC-ceEEEC
Confidence 345667788999999999999999999999999999999999999999999999998888776431 112 356677
Q ss_pred CCCCcccCCCCCCCCCCCCEEEEEeccccCcEEeceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHH
Q 017786 190 VNECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRI 269 (366)
Q Consensus 190 ~n~~~~h~~p~~~~l~~GDiv~iD~g~~~~GY~~D~sRT~~vG~~~~e~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~ai 269 (366)
.+ ..+|+.|+++++++||+|.+|+|+.++||++|++|||++|+++++++++|+++.++++++++++|||++++||++++
T Consensus 240 ~~-~~~h~~~~~~~l~~Gd~v~iD~g~~~~GY~sditRT~~vG~~~~~~~~~~~~~~~a~~~~~~~~rpG~~~~dv~~a~ 318 (406)
T PRK14575 240 AD-FSPKLIPSNTKACSGDLIKFDCGVDVDGYGADIARTFVVGEPPEITRKIYQTIRTGHEHMLSMVAPGVKMKDVFDST 318 (406)
T ss_pred CC-cccCCCCCCCcCCCCCEEEEEeceEECCEeeeeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHH
Confidence 76 56899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCc-cCCceeeccCC--ccccCCccccCCCCCCccccCCcEEEEccceecCcccccccCCCCeeeecCCCce
Q 017786 270 SEHAEKYGFGV-VERFVGHGVGK--VFHSEPIIYHNRNENPGCMVEGQTFTIEPILTMGSIECITWPDNWTTLTADGNPA 346 (366)
Q Consensus 270 ~~~~~~~G~~~-~~~~~GHgIG~--~~he~P~i~~~~~~~~~~l~~GmvftiEP~i~~~~~~~~~~~d~wt~~t~dg~~~ 346 (366)
++++++.||.. ..+++|||+|. .+||.|++.. +++.+|++||||+|||++|.+ |.+|
T Consensus 319 ~~~~~~~G~~~~~~~~~GHGiG~~lg~~e~P~i~~---~~~~~Le~GMv~tiEpgiy~~-----------------g~gG 378 (406)
T PRK14575 319 MEVIKKSGLPNYNRGHLGHGNGVFLGLEESPFVST---HATESFTSGMVLSLETPYYGY-----------------NLGS 378 (406)
T ss_pred HHHHHHcCCccccCCCCCCcccCCCCCccCCCCCC---CCCCCcCCCCEEEECCeeecC-----------------CCcE
Confidence 99999999974 46789999995 8899999865 456799999999999999863 4468
Q ss_pred EEEEEEEEEeCCceEeCCCC
Q 017786 347 AQFEHTILITRTGAEILTIC 366 (366)
Q Consensus 347 a~~EdtvlVTedG~EiLT~~ 366 (366)
+++||||+||++|+|+||++
T Consensus 379 vriEDtvlVT~~G~e~LT~~ 398 (406)
T PRK14575 379 IMIEDMILINKEGIEFLSKL 398 (406)
T ss_pred EEEEeEEEEcCCCcccCCCC
Confidence 99999999999999999964
No 17
>cd01087 Prolidase Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.
Probab=100.00 E-value=7.7e-47 Score=351.81 Aligned_cols=223 Identities=25% Similarity=0.316 Sum_probs=197.6
Q ss_pred HHHHHHHHHHHHHHHHHHhHhccCCccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCeeeecCCCCcccCCCCCCCCCCCC
Q 017786 129 IAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGD 208 (366)
Q Consensus 129 I~~~R~A~~ia~~~l~~~~~~i~pGvTe~ei~~~~~~~~~~~G~~ps~~~~~~fp~~v~~g~n~~~~h~~p~~~~l~~GD 208 (366)
|++||+|+++++++++++.+.++||+||.||++.+++.+.++|+++ +|+.++++|.|...+|+.|++++|++||
T Consensus 1 i~~lr~A~~i~~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~G~~~------~~~~~v~~g~~~~~~H~~~~~~~l~~Gd 74 (243)
T cd01087 1 IELMRKACDISAEAHRAAMKASRPGMSEYELEAEFEYEFRSRGARL------AYSYIVAAGSNAAILHYVHNDQPLKDGD 74 (243)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHHcCCCc------CCCCeEEECCCccccCCCcCCCcCCCCC
Confidence 6899999999999999999999999999999999999999999883 3788999999999999999999999999
Q ss_pred EEEEEeccccCcEEeceeeEEEc-cCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCC---------
Q 017786 209 IINIDVTVYLNGYHGDTSKTFLC-GNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGF--------- 278 (366)
Q Consensus 209 iv~iD~g~~~~GY~~D~sRT~~v-G~~~~e~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~ai~~~~~~~G~--------- 278 (366)
+|++|+++.|+||++|++|||++ |+++++++++|+++.++++++++.+|||++++||++++++++++.|+
T Consensus 75 ~v~vD~g~~~~GY~ad~~Rt~~vgg~~~~~~~~~~~~~~~a~~~~i~~~rpG~~~~~v~~a~~~~~~~~~~~~g~~~~~~ 154 (243)
T cd01087 75 LVLIDAGAEYGGYASDITRTFPVNGKFTDEQRELYEAVLAAQKAAIAACKPGVSYEDIHLLAHRVLAEGLKELGILKGDV 154 (243)
T ss_pred EEEEEeCceECCEeeeeeEEEEeCCcCCHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcCcccCch
Confidence 99999999999999999999999 68999999999999999999999999999999999999999987632
Q ss_pred ----------CccCCceeeccCCccccCCccccCCCCCCccccCCcEEEEccceecCcccccccCCCCeeeecCCCceEE
Q 017786 279 ----------GVVERFVGHGVGKVFHSEPIIYHNRNENPGCMVEGQTFTIEPILTMGSIECITWPDNWTTLTADGNPAAQ 348 (366)
Q Consensus 279 ----------~~~~~~~GHgIG~~~he~P~i~~~~~~~~~~l~~GmvftiEP~i~~~~~~~~~~~d~wt~~t~dg~~~a~ 348 (366)
..+.|.+|||||+.+||.|.+.. ..+++.+|++||||+|||++|.+...... ++. .+.++++
T Consensus 155 ~~~~~~~~~~~~~~h~~GhgiGl~~~e~p~~~~-~~~~~~~l~~GMv~~iEp~iy~~~~~~~~-~~~------~~~~g~~ 226 (243)
T cd01087 155 DEIVESGAYAKFFPHGLGHYLGLDVHDVGGYLR-YLRRARPLEPGMVITIEPGIYFIPDLLDV-PEY------FRGGGIR 226 (243)
T ss_pred HhhhhhhhhhhhcCCCCccccCcccccCccccc-cCCCCCCCCCCCEEEECCEEEeCCccccc-ccc------cceeEEE
Confidence 22456799999999999997721 12467899999999999999986422211 222 2568999
Q ss_pred EEEEEEEeCCceEeCCC
Q 017786 349 FEHTILITRTGAEILTI 365 (366)
Q Consensus 349 ~EdtvlVTedG~EiLT~ 365 (366)
+||||+||++|+|+||+
T Consensus 227 ied~v~Vt~~G~e~Lt~ 243 (243)
T cd01087 227 IEDDVLVTEDGPENLTR 243 (243)
T ss_pred eeeEEEEcCCcceeCcC
Confidence 99999999999999995
No 18
>TIGR02993 ectoine_eutD ectoine utilization protein EutD. Members of this family are putative peptidases or hydrolases similar to Xaa-Pro aminopeptidase (pfam00557). They belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. The exact function is unknown.
Probab=100.00 E-value=3.1e-47 Score=377.57 Aligned_cols=233 Identities=18% Similarity=0.217 Sum_probs=202.5
Q ss_pred CCCCCCCCccccCCCHHHHHHHHHHHHHHHHHHHHHhHhccCCccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCeeeecC
Q 017786 111 STSLPDLSPEYQIHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSV 190 (366)
Q Consensus 111 ~~~~~~l~~~R~iKs~~EI~~~R~A~~ia~~~l~~~~~~i~pGvTe~ei~~~~~~~~~~~G~~ps~~~~~~fp~~v~~g~ 190 (366)
.+..+.+.++|+|||++||++||+|+++++++++++.+.++||+||.||++.+.+.... +.......+.+|.+++.+|.
T Consensus 146 ~d~~~~~~~lR~iKs~~EI~~lr~A~~i~~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~-~~~~~g~~~~~~~~iv~sG~ 224 (391)
T TIGR02993 146 VDATALVNWQRAVKSETEISYMRVAARIVEKMHQRIFERIEPGMRKCDLVADIYDAGIR-GVDGFGGDYPAIVPLLPSGA 224 (391)
T ss_pred EehHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhh-cccCcCCCcCCcccccccCc
Confidence 45566788999999999999999999999999999999999999999999988655332 11000001223556778999
Q ss_pred CCCcccCCCCCCCCCCCCEEEEEeccccCcEEeceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHH
Q 017786 191 NECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRIS 270 (366)
Q Consensus 191 n~~~~h~~p~~~~l~~GDiv~iD~g~~~~GY~~D~sRT~~vG~~~~e~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~ai~ 270 (366)
|...+|+.|++++|++||+|++|+++.|+||++|++|||++|+++++++++|+.+.++++++++++|||++++||+++++
T Consensus 225 ~~a~pH~~~~~~~l~~gd~v~iD~g~~~~GY~sD~tRT~~vG~p~~~~~~~~~~~~~a~~~~i~~ikpG~~~~dv~~~~~ 304 (391)
T TIGR02993 225 DASAPHLTWDDSPMKVGEGTFFEIAGCYKRYHCPLSRTVFLGKPTQAFLDAEKAVLEGMEAGLEAAKPGNTCEDIANAFF 304 (391)
T ss_pred cccCCCCCCCCCcccCCCEEEEEeeeecccCccceeEEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCccCCceeeccCCccccC-----CccccCCCCCCccccCCcEEEEccceecCcccccccCCCCeeeecCCCc
Q 017786 271 EHAEKYGFGVVERFVGHGVGKVFHSE-----PIIYHNRNENPGCMVEGQTFTIEPILTMGSIECITWPDNWTTLTADGNP 345 (366)
Q Consensus 271 ~~~~~~G~~~~~~~~GHgIG~~~he~-----P~i~~~~~~~~~~l~~GmvftiEP~i~~~~~~~~~~~d~wt~~t~dg~~ 345 (366)
++++++||.. .|++|||||+.+|+. |.+.. +++.+|++||||+|||++|.+ | .
T Consensus 305 ~~~~~~G~~~-~h~~GhgiGl~~~~~~~e~~~~l~~---~~~~~L~~GMv~tvEpgiy~~-----------------~-~ 362 (391)
T TIGR02993 305 AVLKKYGIHK-DSRTGYPIGLSYPPDWGERTMSLRP---GDNTVLKPGMTFHFMTGLWME-----------------D-W 362 (391)
T ss_pred HHHHHcCCcc-CCCceeeeccCcCCCCCCccccccC---CCCceecCCCEEEEcceeEeC-----------------C-C
Confidence 9999999974 588999999998742 34432 467899999999999999874 2 4
Q ss_pred eEEEEEEEEEeCCceEeCCCC
Q 017786 346 AAQFEHTILITRTGAEILTIC 366 (366)
Q Consensus 346 ~a~~EdtvlVTedG~EiLT~~ 366 (366)
|+++||||+||++|+|+||.+
T Consensus 363 Gvried~v~VT~~G~e~Lt~~ 383 (391)
T TIGR02993 363 GLEITESILITETGVECLSSV 383 (391)
T ss_pred CeEEeeEEEECCCcceecccC
Confidence 789999999999999999974
No 19
>PRK14576 putative endopeptidase; Provisional
Probab=100.00 E-value=1.7e-46 Score=373.54 Aligned_cols=231 Identities=19% Similarity=0.264 Sum_probs=208.2
Q ss_pred cCCCCCCCCccccCCCHHHHHHHHHHHHHHHHHHHHHhHhccCCccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCeeeec
Q 017786 110 SSTSLPDLSPEYQIHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTS 189 (366)
Q Consensus 110 ~~~~~~~l~~~R~iKs~~EI~~~R~A~~ia~~~l~~~~~~i~pGvTe~ei~~~~~~~~~~~G~~ps~~~~~~fp~~v~~g 189 (366)
..+..+.+.++|+|||++||++||+|++++++++.++.+.++||+||.||++.++..+.+.|... +..| .++++|
T Consensus 164 ~vd~~~~l~~lR~iKs~~EI~~~r~A~~i~~~~~~~~~~~i~pG~tE~elaa~~~~~~~~~g~~~----~~~~-~~v~~G 238 (405)
T PRK14576 164 LVDSTALFNEIRMIKSPWEIEHLRKSAEITEYGIASAAKKIRVGCTAAELTAAFKAAVMSFPETN----FSRF-NLISVG 238 (405)
T ss_pred EEEcHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCc----CCCC-CEEEEC
Confidence 34555678899999999999999999999999999999999999999999999999999887541 1123 567888
Q ss_pred CCCCcccCCCCCCCCCCCCEEEEEeccccCcEEeceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHH
Q 017786 190 VNECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRI 269 (366)
Q Consensus 190 ~n~~~~h~~p~~~~l~~GDiv~iD~g~~~~GY~~D~sRT~~vG~~~~e~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~ai 269 (366)
.| ..+|+.|+++++++||+|.+|+++.++||++|++|||++|+++++++++|+++.++++++++++|||++++||++++
T Consensus 239 ~~-~~~h~~~~~~~l~~Gd~v~~d~g~~~~GY~sd~tRT~~~G~p~~~~~~~~~~~~~a~~a~~~~~rPG~~~~dv~~a~ 317 (405)
T PRK14576 239 DN-FSPKIIADTTPAKVGDLIKFDCGIDVAGYGADLARTFVLGEPDKLTQQIYDTIRTGHEHMLSMVAPGVKLKAVFDST 317 (405)
T ss_pred Cc-ccCCCCCCCcccCCCCEEEEEeceeECCEEeeeeEEEECCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHH
Confidence 87 56899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCc-cCCceeeccC--CccccCCccccCCCCCCccccCCcEEEEccceecCcccccccCCCCeeeecCCCce
Q 017786 270 SEHAEKYGFGV-VERFVGHGVG--KVFHSEPIIYHNRNENPGCMVEGQTFTIEPILTMGSIECITWPDNWTTLTADGNPA 346 (366)
Q Consensus 270 ~~~~~~~G~~~-~~~~~GHgIG--~~~he~P~i~~~~~~~~~~l~~GmvftiEP~i~~~~~~~~~~~d~wt~~t~dg~~~ 346 (366)
+++++++||.. ..+++|||+| +.+||.|.+.. +++.+|++||||+|||++|.. |.+|
T Consensus 318 ~~~~~~~G~~~~~~~~~GHgiG~~l~~~e~P~i~~---~~~~~Le~GMv~~vEp~~y~~-----------------g~gg 377 (405)
T PRK14576 318 MAVIKTSGLPHYNRGHLGHGDGVFLGLEEVPFVST---QATETFCPGMVLSLETPYYGI-----------------GVGS 377 (405)
T ss_pred HHHHHHcCCccccCCCCCCCCCCCCCcCcCCCcCC---CCCCccCCCCEEEECCceeec-----------------CCCE
Confidence 99999999974 4578999999 78899998753 457899999999999998763 5578
Q ss_pred EEEEEEEEEeCCceEeCCCC
Q 017786 347 AQFEHTILITRTGAEILTIC 366 (366)
Q Consensus 347 a~~EdtvlVTedG~EiLT~~ 366 (366)
+++||||+||++|+|+||++
T Consensus 378 vriEDtvlVTe~G~e~LT~~ 397 (405)
T PRK14576 378 IMLEDMILITDSGFEFLSKL 397 (405)
T ss_pred EEEeeEEEECCCccccCCCC
Confidence 99999999999999999974
No 20
>TIGR00495 crvDNA_42K 42K curved DNA binding protein. Proteins identified by this model have been identified in a number of species as a nuclear (but not nucleolar) protein with a cell cycle dependence. Various names given to members of this family have included cell cycle protein p38-2G4, DNA-binding protein GBP16, and proliferation-associated protein 1. This protein is closely related to methionine aminopeptidase, a cobolt-binding protein.
Probab=100.00 E-value=7.4e-44 Score=350.97 Aligned_cols=244 Identities=23% Similarity=0.365 Sum_probs=216.1
Q ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHHhHhccCCccHHHHHHHHHHHHHHhCCCCCCC----CCCCCCCeeeecCCCCccc
Q 017786 121 YQIHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPL----GYGGFPKSVCTSVNECMCH 196 (366)
Q Consensus 121 R~iKs~~EI~~~R~A~~ia~~~l~~~~~~i~pGvTe~ei~~~~~~~~~~~G~~ps~~----~~~~fp~~v~~g~n~~~~h 196 (366)
..+|+++||++||+|++|++++++++.+.++||+|+.||+..+++.+.+.++. .+. ++.+|+..+|+++|++++|
T Consensus 11 ~~i~~~~eI~~~r~Aa~Ia~~~l~~~~~~ikpG~t~~el~~~~~~~i~~~~a~-~~~~~~~~~~g~afpt~vSvN~~v~H 89 (389)
T TIGR00495 11 YSLSNPEVVTKYKMAGEIANNVLKSVVEACSPGAKVVDICEKGDAFIMEETAK-IFKKEKEMEKGIAFPTCISVNNCVGH 89 (389)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHhhhh-hhcccccccCCCCCCeEEecCCeeeC
Confidence 46999999999999999999999999999999999999999999999987653 221 1344554567789999999
Q ss_pred CCC--C--CCCCCCCCEEEEEeccccCcEEeceeeEEEccC-----CCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHH
Q 017786 197 GIP--D--SRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGN-----VSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGK 267 (366)
Q Consensus 197 ~~p--~--~~~l~~GDiv~iD~g~~~~GY~~D~sRT~~vG~-----~~~e~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~ 267 (366)
++| + +++|++||+|+||+|+.++||++|++|||++|+ ++++++++++++++|++++++.+|||++++||++
T Consensus 90 ~~P~~~d~~~~Lk~GDvVkIDlG~~idGY~aD~arTv~vG~~~~~~~t~~~~~l~~aa~~A~~aai~~vkPG~~~~dI~~ 169 (389)
T TIGR00495 90 FSPLKSDQDYILKEGDVVKIDLGCHIDGFIALVAHTFVVGVAQEEPVTGRKADVIAAAHLAAEAALRLVKPGNTNTQVTE 169 (389)
T ss_pred CCCCCCCCCcCcCCCCEEEEEEEEEECCEEEEEEEEEEECCcccccCCHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHH
Confidence 999 2 488999999999999999999999999999995 4678999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCccCCceeeccCCcccc-CCccccCCC------CCCccccCCcEEEEccceecCcccccccCCCCeee-
Q 017786 268 RISEHAEKYGFGVVERFVGHGVGKVFHS-EPIIYHNRN------ENPGCMVEGQTFTIEPILTMGSIECITWPDNWTTL- 339 (366)
Q Consensus 268 ai~~~~~~~G~~~~~~~~GHgIG~~~he-~P~i~~~~~------~~~~~l~~GmvftiEP~i~~~~~~~~~~~d~wt~~- 339 (366)
+++++++++||.++++++|||||..+|+ .|.|..+.. .+...|++||||+|||+++.+......++|.||+.
T Consensus 170 ai~~v~~~~G~~~v~~~~gH~igr~~~~g~~~Ii~~~~~~~~~~~~~~~le~gev~aIEp~vs~G~g~v~~~~~~~tiy~ 249 (389)
T TIGR00495 170 AINKVAHSYGCTPVEGMLSHQLKQHVIDGEKVIISNPSDSQKKDHDTAEFEENEVYAVDILVSTGEGKAKDADQRTTIYK 249 (389)
T ss_pred HHHHHHHHcCCeecCCceeecccceeccCCCeeeecCCccccCCCCCCEecCCCEEEEeeeecCCCceEEECCCeeEEEE
Confidence 9999999999999999999999999997 887543322 23568999999999999999988888887778765
Q ss_pred -------------------------------------------------------------ecCCCceEEEEEEEEEeCC
Q 017786 340 -------------------------------------------------------------TADGNPAAQFEHTILITRT 358 (366)
Q Consensus 340 -------------------------------------------------------------t~dg~~~a~~EdtvlVTed 358 (366)
.++|.+.+|||+||+||++
T Consensus 250 ~~~~~~y~lk~~~sr~~l~ei~~~f~~~PF~~R~l~~~~~~~~gl~e~~~~~~l~~ypvl~e~~g~~Vaqf~~Tv~v~~~ 329 (389)
T TIGR00495 250 RDPSKTYGLKMKASRAFFSEIERRFDAMPFTLRNFEDEKRARMGLVECVKHELLQPYPVLYEKEGEFVAQFKFTVLLMPN 329 (389)
T ss_pred ECCCCCcCCCCHHHHHHHHHHHHhCCCCCcchHHhcchhhHHHHHHHHHHCCCcccCCceEeeCCCeEEEEEEEEEECCC
Confidence 4568889999999999999
Q ss_pred ceEeCCC
Q 017786 359 GAEILTI 365 (366)
Q Consensus 359 G~EiLT~ 365 (366)
|+++||.
T Consensus 330 g~~~~t~ 336 (389)
T TIGR00495 330 GPMRITS 336 (389)
T ss_pred CcEEeCC
Confidence 9999996
No 21
>PRK13607 proline dipeptidase; Provisional
Probab=100.00 E-value=1e-44 Score=363.37 Aligned_cols=247 Identities=19% Similarity=0.212 Sum_probs=200.1
Q ss_pred CCCCCCCccccCCCHHHHHHHHHHHHHHHHHHHHHhHhccCCccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCeeeecCC
Q 017786 112 TSLPDLSPEYQIHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVN 191 (366)
Q Consensus 112 ~~~~~l~~~R~iKs~~EI~~~R~A~~ia~~~l~~~~~~i~pGvTe~ei~~~~~~~~~~~G~~ps~~~~~~fp~~v~~g~n 191 (366)
++.+.+.++|+|||++||+.||+|+++++++++++++.++||+||.||++.+... .+..... .+|++++++|.|
T Consensus 150 ~l~~~l~~lR~iKs~~EI~~mr~A~~i~~~a~~~~~~~i~pG~tE~ei~~~~~~~---~~~~~~~---~~y~~iva~G~n 223 (443)
T PRK13607 150 GVLDYLHYHRAYKTDYELACMREAQKIAVAGHRAAKEAFRAGMSEFDINLAYLTA---TGQRDND---VPYGNIVALNEH 223 (443)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHH---hCCCCcC---CCCCcEEEecCc
Confidence 3445677899999999999999999999999999999999999999999865433 2222211 358899999999
Q ss_pred CCcccCCCCCC-CCCCCCEEEEEeccccCcEEeceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHH
Q 017786 192 ECMCHGIPDSR-QLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRIS 270 (366)
Q Consensus 192 ~~~~h~~p~~~-~l~~GDiv~iD~g~~~~GY~~D~sRT~~vG~~~~e~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~ai~ 270 (366)
..++|+.++++ .+++||+|+||+|+.++||++|++|||+ |+++++++++|+++.+|++++++++|||++++||+.++.
T Consensus 224 aa~~H~~~~~~~~~~~Gd~vliD~Ga~~~GY~sDiTRTf~-g~~~~~~~~ly~~v~~aq~aai~~ikPG~~~~dv~~aa~ 302 (443)
T PRK13607 224 AAVLHYTKLDHQAPAEMRSFLIDAGAEYNGYAADITRTYA-AKEDNDFAALIKDVNKEQLALIATMKPGVSYVDLHIQMH 302 (443)
T ss_pred ceEecCCccCCCCCCCCCEEEEEeeEEECCEEecceEEEe-cCCCHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHH
Confidence 99999999875 6899999999999999999999999999 888999999999999999999999999999999999987
Q ss_pred HHH----HHcCCC----------------ccCCceeeccCCccccCCccccC-------------CCCCCccccCCcEEE
Q 017786 271 EHA----EKYGFG----------------VVERFVGHGVGKVFHSEPIIYHN-------------RNENPGCMVEGQTFT 317 (366)
Q Consensus 271 ~~~----~~~G~~----------------~~~~~~GHgIG~~~he~P~i~~~-------------~~~~~~~l~~Gmvft 317 (366)
+++ .+.|+. .+.|.+||+||+.+|+.+.+..+ .-....+|++|||||
T Consensus 303 ~~i~~~L~~~Gl~~g~~~~~~~~~g~~~~~f~HglGH~iGldvHd~~~~~~~~~~~~~~~~~~~~~l~~~~~L~~GmV~T 382 (443)
T PRK13607 303 QRIAKLLRKFQIVTGLSEEAMVEQGITSPFFPHGLGHPLGLQVHDVAGFMQDDRGTHLAAPEKHPYLRCTRVLEPGMVLT 382 (443)
T ss_pred HHHHHHHHHcCCCCCCCHHHHHhCCCceEecCCCccCccCcccccCCCcccccccccccccccccccccCCcCCCCcEEE
Confidence 665 445544 24677999999999997543210 002457999999999
Q ss_pred EccceecCcccccccCC-------CCeeeec-CCCceEEEEEEEEEeCCceEeCCC
Q 017786 318 IEPILTMGSIECITWPD-------NWTTLTA-DGNPAAQFEHTILITRTGAEILTI 365 (366)
Q Consensus 318 iEP~i~~~~~~~~~~~d-------~wt~~t~-dg~~~a~~EdtvlVTedG~EiLT~ 365 (366)
|||++|........|.+ +|..+.+ .+.+|+|+||+|+||++|+|+||+
T Consensus 383 vEPGiY~~~~ll~~~~~~~~~~~in~~~i~~~~~~GGvRIED~vlVT~~G~e~Lt~ 438 (443)
T PRK13607 383 IEPGLYFIDSLLAPLREGPFSKHFNWQKIDALKPFGGIRIEDNVVVHENGVENMTR 438 (443)
T ss_pred ECCeeeeChhhhchhhhhhhhhhccHHHHHhhcCCCEEeecceEEEcCCCCeECCh
Confidence 99999986422112211 2222211 355799999999999999999995
No 22
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P. The members of this subfamily presumably catalyse hydrolysis of Xaa-Pro dipeptides and/or release of any N-terminal amino acid, including proline, that is linked with proline.
Probab=100.00 E-value=3.5e-43 Score=318.66 Aligned_cols=207 Identities=28% Similarity=0.512 Sum_probs=193.1
Q ss_pred HHHHHHHHHHHHHHHHHHhHhccCCccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCeeeecCCCCcccCCCCCCCCCCCC
Q 017786 129 IAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGD 208 (366)
Q Consensus 129 I~~~R~A~~ia~~~l~~~~~~i~pGvTe~ei~~~~~~~~~~~G~~ps~~~~~~fp~~v~~g~n~~~~h~~p~~~~l~~GD 208 (366)
|++||+|+++++++++++.+.++||+||.||++.+++.+.++|+++. +|++++++|.|...+|+.|++++|++||
T Consensus 1 i~~~r~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~g~~~~-----~~~~~v~~g~~~~~~h~~~~~~~l~~gd 75 (208)
T cd01092 1 IELLRKAARIADKAFEELLEFIKPGMTEREVAAELEYFMRKLGAEGP-----SFDTIVASGPNSALPHGVPSDRKIEEGD 75 (208)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHcCCCCC-----CCCcEEEECccccccCCCCCCcCcCCCC
Confidence 68999999999999999999999999999999999999999998742 4889999999999999999999999999
Q ss_pred EEEEEeccccCcEEeceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCc-cCCceee
Q 017786 209 IINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGV-VERFVGH 287 (366)
Q Consensus 209 iv~iD~g~~~~GY~~D~sRT~~vG~~~~e~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~ai~~~~~~~G~~~-~~~~~GH 287 (366)
+|++|+++.++||++|++||+++|+++++++++++++.++++++++.+|||++++||+++++++++++|+.. +.+.+||
T Consensus 76 ~v~id~g~~~~gy~~d~~RT~~~g~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~di~~~~~~~~~~~g~~~~~~~~~Gh 155 (208)
T cd01092 76 LVLIDFGAIYDGYCSDITRTVAVGEPSDELKEIYEIVLEAQQAAIKAVKPGVTAKEVDKAARDVIEEAGYGEYFIHRTGH 155 (208)
T ss_pred EEEEEeeeeECCEeccceeEEECCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCccccCCCCCcc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999864 4667999
Q ss_pred ccCCccccCCccccCCCCCCccccCCcEEEEccceecCcccccccCCCCeeeecCCCceEEEEEEEEEeCCce
Q 017786 288 GVGKVFHSEPIIYHNRNENPGCMVEGQTFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHTILITRTGA 360 (366)
Q Consensus 288 gIG~~~he~P~i~~~~~~~~~~l~~GmvftiEP~i~~~~~~~~~~~d~wt~~t~dg~~~a~~EdtvlVTedG~ 360 (366)
|||+.+||.|.+.. +++.+|++||||+|||+++.+ +.+++++||||+||++|+
T Consensus 156 ~iG~~~~e~p~i~~---~~~~~l~~gmv~~iep~~~~~-----------------~~~g~~~ed~v~vt~~g~ 208 (208)
T cd01092 156 GVGLEVHEAPYISP---GSDDVLEEGMVFTIEPGIYIP-----------------GKGGVRIEDDVLVTEDGC 208 (208)
T ss_pred ccCcccCcCCCcCC---CCCCCcCCCCEEEECCeEEec-----------------CCCEEEeeeEEEECCCCC
Confidence 99999999998753 467899999999999999863 457899999999999995
No 23
>cd01085 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide.
Probab=100.00 E-value=4.1e-42 Score=316.21 Aligned_cols=209 Identities=17% Similarity=0.150 Sum_probs=185.9
Q ss_pred HHHHHHHHHHHHHHHHHhHhccCC--ccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCeeeecCCCCcccCCCC---CCCC
Q 017786 130 AKMRAACELAARVLDAAGKLVRPS--VTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPD---SRQL 204 (366)
Q Consensus 130 ~~~R~A~~ia~~~l~~~~~~i~pG--vTe~ei~~~~~~~~~~~G~~ps~~~~~~fp~~v~~g~n~~~~h~~p~---~~~l 204 (366)
+.||.+..+ .++++.+.+.++|| +||.||++.+++++...|.++. .+|+++||+|.|+.++|+.|+ +++|
T Consensus 5 ~~~~~~~~~-~~~~~~~~~~i~~G~~~tE~eiaa~~~~~~~~~g~~~~----~~f~~~v~~g~n~~~~H~~p~~~~~r~l 79 (224)
T cd01085 5 AHIRDGVAL-VEFLAWLEQEVPKGETITELSAADKLEEFRRQQKGYVG----LSFDTISGFGPNGAIVHYSPTEESNRKI 79 (224)
T ss_pred HHHHHHHHH-HHHHHHHHHHhccCCCEeHHHHHHHHHHHHHHcCCCcC----CCcceEEEecCccCcCCCCcCcccCccc
Confidence 356666666 59999999999999 9999999999988877765432 258999999999999999998 9999
Q ss_pred CCCCEEEEEeccccCcEEeceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhc-CCCCcHHHHHHHHHHHHHHcCCCccCC
Q 017786 205 QDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVC-KDGASFKKIGKRISEHAEKYGFGVVER 283 (366)
Q Consensus 205 ~~GDiv~iD~g~~~~GY~~D~sRT~~vG~~~~e~~~l~~~~~ea~~~ai~~~-kPG~~~~dI~~ai~~~~~~~G~~~~~~ 283 (366)
++||+|++|+++.++||++|++|||++|+++++++++++.+++++.++++.+ +||+++.+|.+++++++.+.|+. +.+
T Consensus 80 ~~GD~V~iD~g~~~~gY~aD~~RT~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~~~g~~-~~h 158 (224)
T cd01085 80 SPDGLYLIDSGGQYLDGTTDITRTVHLGEPTAEQKRDYTLVLKGHIALARAKFPKGTTGSQLDALARQPLWKAGLD-YGH 158 (224)
T ss_pred CCCCEEEEEeCccCCCcccccEEeecCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhCCC-CCC
Confidence 9999999999999999999999999999999999999999999999999988 49999999999999999999986 567
Q ss_pred ceeeccC--CccccCCccccCCCCCCccccCCcEEEEccceecCcccccccCCCCeeeecCCCceEEEEEEEEEeCCceE
Q 017786 284 FVGHGVG--KVFHSEPIIYHNRNENPGCMVEGQTFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHTILITRTGAE 361 (366)
Q Consensus 284 ~~GHgIG--~~~he~P~i~~~~~~~~~~l~~GmvftiEP~i~~~~~~~~~~~d~wt~~t~dg~~~a~~EdtvlVTedG~E 361 (366)
++||||| +.+||.|.+. +..+++.+|++||||+|||++|.+ |.+++++||||+||++|+.
T Consensus 159 ~~GHgIG~~l~~hE~P~i~-~~~~~~~~L~~GmvftiEP~iy~~-----------------g~~gvried~v~Vt~~G~~ 220 (224)
T cd01085 159 GTGHGVGSFLNVHEGPQSI-SPAPNNVPLKAGMILSNEPGYYKE-----------------GKYGIRIENLVLVVEAETT 220 (224)
T ss_pred CCCCCCCCCCcCCCCCCcC-CcCCCCCCcCCCCEEEECCEeEeC-----------------CCeEEEeeEEEEEeeCCcC
Confidence 8999999 5789999875 223466899999999999999964 5578999999999999985
Q ss_pred e
Q 017786 362 I 362 (366)
Q Consensus 362 i 362 (366)
-
T Consensus 221 ~ 221 (224)
T cd01085 221 E 221 (224)
T ss_pred C
Confidence 4
No 24
>PTZ00053 methionine aminopeptidase 2; Provisional
Probab=100.00 E-value=3e-41 Score=335.03 Aligned_cols=238 Identities=25% Similarity=0.351 Sum_probs=203.8
Q ss_pred ccccCCCHHHHHHHHHHHHHHHHHHHHHhHhccCCccHHHHHHHHHHHHHHh----CCCCCCCCCCCCCCeeeecCCCCc
Q 017786 119 PEYQIHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEA----GAYPSPLGYGGFPKSVCTSVNECM 194 (366)
Q Consensus 119 ~~R~iKs~~EI~~~R~A~~ia~~~l~~~~~~i~pGvTe~ei~~~~~~~~~~~----G~~ps~~~~~~fp~~v~~g~n~~~ 194 (366)
+.+..+|++||+.||+|++|++++++++.+.++||+|+.||+..++..+.+. |+.. ..+||+ ++|.|++.
T Consensus 148 ~~~~~~s~~EI~~~R~AaeIa~~vl~~~~~~IkpG~se~EIa~~ie~~ir~~~~~~G~~~----g~aFPt--~vS~N~~a 221 (470)
T PTZ00053 148 RELEKLSEEQYQDLRRAAEVHRQVRRYAQSVIKPGVKLIDICERIESKSRELIEADGLKC----GWAFPT--GCSLNHCA 221 (470)
T ss_pred CccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHhcCCcc----cCCCCc--eeecCccc
Confidence 3445689999999999999999999999999999999999999988877654 4432 246887 45799999
Q ss_pred ccCCCC---CCCCCCCCEEEEEeccccCcEEeceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHH
Q 017786 195 CHGIPD---SRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISE 271 (366)
Q Consensus 195 ~h~~p~---~~~l~~GDiv~iD~g~~~~GY~~D~sRT~~vG~~~~e~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~ai~~ 271 (366)
+|+.|+ +++|++||+|.||+|+.++||++|++||+++| ++++++++++++|++++|++++||++++||++++++
T Consensus 222 aH~tP~~gd~~vLk~GDvVkID~G~~vdGYiaD~ArTv~vg---~~~~~L~eAv~eA~~aaI~~~kpGv~~~dI~~AIqe 298 (470)
T PTZ00053 222 AHYTPNTGDKTVLTYDDVCKLDFGTHVNGRIIDCAFTVAFN---PKYDPLLQATKDATNTGIKEAGIDVRLSDIGAAIQE 298 (470)
T ss_pred cCCCCCCCCCcEecCCCeEEEEEeEEECCEEEeEEEEEEeC---HHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHH
Confidence 999995 68899999999999999999999999999986 688999999999999999999999999999999999
Q ss_pred HHHHcCCC---------ccCCceeeccCC-ccccCCccccCCCCCCccccCCcEEEEccceecCccccc-----------
Q 017786 272 HAEKYGFG---------VVERFVGHGVGK-VFHSEPIIYHNRNENPGCMVEGQTFTIEPILTMGSIECI----------- 330 (366)
Q Consensus 272 ~~~~~G~~---------~~~~~~GHgIG~-~~he~P~i~~~~~~~~~~l~~GmvftiEP~i~~~~~~~~----------- 330 (366)
+++++||. ++.+++|||||+ .+|+.|.++...+.+..+|++||||+|||+++.|.....
T Consensus 299 vies~G~e~~Gk~f~~k~I~nltGHgIG~y~iHe~k~iP~v~~~~~~~LeeGmVfaIEPf~stG~G~v~~~~~~siY~~~ 378 (470)
T PTZ00053 299 VIESYEVEIKGKTYPIKSIRNLNGHSIGPYIIHGGKSVPIVKGGENTRMEEGELFAIETFASTGRGYVNEDLECSHYMKD 378 (470)
T ss_pred HHHHcCCcccCcccccccccCCcccCCCCccccCCCcCCeeCCCCCCEecCCCEEEEcceeeCCCCeEecCCCceeeeEc
Confidence 99999974 468999999998 899988777665667789999999999999986653321
Q ss_pred -------------------------------ccCCC---------------------Cee-eecCCCceEEEEEEEEEeC
Q 017786 331 -------------------------------TWPDN---------------------WTT-LTADGNPAAQFEHTILITR 357 (366)
Q Consensus 331 -------------------------------~~~d~---------------------wt~-~t~dg~~~a~~EdtvlVTe 357 (366)
.|.+. +.+ +..+|++.+||||||+|++
T Consensus 379 ~~~~~~~lk~~~ar~ll~~I~~~f~tlPF~~R~l~~~~~~~~~~gl~~lv~~giv~~Yp~L~e~~G~~VAQfehTvll~p 458 (470)
T PTZ00053 379 PGAEFVPLRLPKAKQLLKHINTNFGTLAFCRRWLDRLGQDRHLLALKQLVDAGIVNPYPPLCDVRGSYTSQMEHTILLRP 458 (470)
T ss_pred CcCCcCCCCCHHHHHHHHHHHHHCCCCCcchhhhhccchhHHHHHHHHHHHCCCcccCCccCccCCCEEeEEEEEEEECC
Confidence 11111 011 1357889999999999999
Q ss_pred CceEeCCC
Q 017786 358 TGAEILTI 365 (366)
Q Consensus 358 dG~EiLT~ 365 (366)
+|.|++|+
T Consensus 459 ~~~~vis~ 466 (470)
T PTZ00053 459 TCKEVLSR 466 (470)
T ss_pred CCCEecCC
Confidence 99999985
No 25
>PRK08671 methionine aminopeptidase; Provisional
Probab=100.00 E-value=3.5e-41 Score=321.57 Aligned_cols=227 Identities=31% Similarity=0.550 Sum_probs=199.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhHhccCCccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCeeeecCCCCcccCCCC---CCCC
Q 017786 128 SIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPD---SRQL 204 (366)
Q Consensus 128 EI~~~R~A~~ia~~~l~~~~~~i~pGvTe~ei~~~~~~~~~~~G~~ps~~~~~~fp~~v~~g~n~~~~h~~p~---~~~l 204 (366)
+|++||+|++|++++++.+.+.++||+||.||++.+++.+.+.|+.++ ||+.+ +.|+..+|+.|. +++|
T Consensus 1 ~i~~~r~A~~I~~~~~~~~~~~i~pG~se~ei~~~~~~~i~~~g~~~a------fp~~v--s~n~~~~H~~p~~~d~~~l 72 (291)
T PRK08671 1 ELEKYLEAGKIASKVREEAAKLIKPGAKLLDVAEFVENRIRELGAKPA------FPCNI--SINEVAAHYTPSPGDERVF 72 (291)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCccC------CCCEE--eeCCCccCCCCCCCCCccc
Confidence 589999999999999999999999999999999999999999998764 77655 567788999985 6889
Q ss_pred CCCCEEEEEeccccCcEEeceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCccCCc
Q 017786 205 QDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGVVERF 284 (366)
Q Consensus 205 ~~GDiv~iD~g~~~~GY~~D~sRT~~vG~~~~e~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~ai~~~~~~~G~~~~~~~ 284 (366)
++||+|+||+|+.++||++|++||+++| ++++++++++++|++++++.+|||++++||+++++++++++||..+.++
T Consensus 73 ~~GDvV~iD~G~~~dGY~aD~arT~~vG---~~~~~l~~a~~~a~~aai~~ikpG~~~~dv~~~i~~vi~~~G~~~~~~~ 149 (291)
T PRK08671 73 PEGDVVKLDLGAHVDGYIADTAVTVDLG---GKYEDLVEASEEALEAAIEVVRPGVSVGEIGRVIEETIRSYGFKPIRNL 149 (291)
T ss_pred CCCCEEEEEEeEEECCEEEEEEEEEEeC---hhHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCcccCCC
Confidence 9999999999999999999999999998 4788999999999999999999999999999999999999999988899
Q ss_pred eeeccCC-ccccCCccccCCCCCCccccCCcEEEEccceecCccccc---------------------------------
Q 017786 285 VGHGVGK-VFHSEPIIYHNRNENPGCMVEGQTFTIEPILTMGSIECI--------------------------------- 330 (366)
Q Consensus 285 ~GHgIG~-~~he~P~i~~~~~~~~~~l~~GmvftiEP~i~~~~~~~~--------------------------------- 330 (366)
+|||||+ .+|+.|.|+.....++.+|++||||+|||+++.+.....
T Consensus 150 ~GHgiG~~~~he~p~ip~~~~~~~~~le~GmV~aIEp~~t~G~G~v~~~~~~~iy~~~~~~~~k~~~~r~~~~~i~~~~~ 229 (291)
T PRK08671 150 TGHGLERYELHAGPSIPNYDEGGGVKLEEGDVYAIEPFATDGEGKVVEGPEVEIYSLLRNRPVRLPAARKLLEEIEEEYN 229 (291)
T ss_pred cccCcCCCcccCCCccCccCCCCCceeCCCCEEEEcceEECCCCeEecCCceEEEeecCCCCCCCHHHHHHHHHHHHHCC
Confidence 9999997 789999987665667889999999999999886543211
Q ss_pred ------ccC-C-------------------CCee-eecCCCceEEEEEEEEEeCCceEeCCC
Q 017786 331 ------TWP-D-------------------NWTT-LTADGNPAAQFEHTILITRTGAEILTI 365 (366)
Q Consensus 331 ------~~~-d-------------------~wt~-~t~dg~~~a~~EdtvlVTedG~EiLT~ 365 (366)
.|- | .+.+ +.++|+..+||||||+||++|++++|.
T Consensus 230 ~~pF~~r~l~~~~~~~~~~~~~~~~~~~~~~yp~l~e~~~~~vaq~~~Tv~v~~~g~~~~t~ 291 (291)
T PRK08671 230 TLPFAERWLEGLFGEDKLELRRLLKAGALYGYPVLKEVKGGLVSQAEHTVIVTEDGCEVTTK 291 (291)
T ss_pred CCCcchHHhhccchhhHHHHHHHHHCCCcccCCccEecCCCEEEEEEEEEEECCCCcEEecC
Confidence 111 1 1111 145788999999999999999999985
No 26
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This entry contains proteins that belong to MEROPS peptidase family M24 (clan MG), which share a common structural-fold, the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. The entry also contains proteins that have lost catalytic activity, for example Spt16, which is a component of the FACT complex. The crystal structure of the N-terminal domain of Spt16, determined to 2.1A, reveals an aminopeptidase P fold whose enzymatic activity has been lost. This fold binds directly to histones H3-H4 through a interaction with their globular core domains, as well as with their N-terminal tails []. The FACT complex is a stable heterodimer in Saccharomyces cerevisiae (Baker's yeast) comprising Spt16p (P32558 from SWISSPROT, IPR013953 from INTERPRO) and Pob3p (Q04636 from SWISSPROT, IPR000969 from INTERPRO). The complex plays a role in transcription initiation and promotes binding of TATA-binding protein (TBP) to a TATA box in chromatin []; it also facilitates RNA Polymerase II transcription elongation through nucleosomes by destabilising and then reassembling nucleosome structure [, , ]. ; GO: 0009987 cellular process; PDB: 4A6V_B 4A6W_A 3CTZ_A 3IG4_B 2B3H_A 2NQ6_A 2NQ7_A 2GZ5_A 2G6P_A 2B3L_A ....
Probab=100.00 E-value=3.9e-41 Score=305.54 Aligned_cols=204 Identities=31% Similarity=0.489 Sum_probs=183.2
Q ss_pred HHHHHHHHHHHHHHHHHhHhccCCccHHHHHHHHHHH-HHHhCCCCCCCCCCCCCCeeeecCCCCcccCCCCCCCCCCCC
Q 017786 130 AKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQM-IIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGD 208 (366)
Q Consensus 130 ~~~R~A~~ia~~~l~~~~~~i~pGvTe~ei~~~~~~~-~~~~G~~ps~~~~~~fp~~v~~g~n~~~~h~~p~~~~l~~GD 208 (366)
|+||+|+++++++++++.+.++||+||.||++.+.++ +.++|... .+|+.++++|.|...+|+.|++++|++||
T Consensus 1 e~~R~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~~g~~~-----~~~~~~~~~g~~~~~~~~~~~~~~l~~gd 75 (207)
T PF00557_consen 1 ECMRKAARIADAAMEAAMEALRPGMTEYEIAAAIERAMLRRHGGEE-----PAFPPIVGSGPNTDLPHYTPTDRRLQEGD 75 (207)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSTTCBHHHHHHHHHHHHHHHTTTTE-----ESSESEEEECCCCGETTTBCCSSBESTTE
T ss_pred CHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHHcCCCc-----ccCCceEecCCcceecceeccceeeecCC
Confidence 6899999999999999999999999999999999998 56667443 24788999999999999999999999999
Q ss_pred EEEEEeccccCcEEeceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCC-CccCCceee
Q 017786 209 IINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGF-GVVERFVGH 287 (366)
Q Consensus 209 iv~iD~g~~~~GY~~D~sRT~~vG~~~~e~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~ai~~~~~~~G~-~~~~~~~GH 287 (366)
+|.+|+++.|+||++|++||+++| ++++++++++.++++++.+++.+|||++++||++++.+.++++|| ..+.+.+||
T Consensus 76 ~v~id~~~~~~gy~~d~~Rt~~~G-~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~v~~~~~~~~~~~g~~~~~~~~~GH 154 (207)
T PF00557_consen 76 IVIIDFGPRYDGYHADIARTFVVG-PTPEQRRAYEAAREALEAAIEALRPGVTGSDVYEAVREVLEEYGLEEPYPHGLGH 154 (207)
T ss_dssp EEEEEEEEEETTEEEEEEEEEESS-SHHHHHHHHHHHHHHHHHHHHH-STTSBHHHHHHHHHHHHHHTTEGEEBTSSSEE
T ss_pred cceeeccceeeeeEeeeeeEEEEe-ecccccchhhhhHHHHHhHhhhcccccccchhhHHHHHHHHhhcccceeeecccc
Confidence 999999999999999999999999 999999999999999999999999999999999999999999999 557889999
Q ss_pred ccCCccccC-CccccCCCCCCccccCCcEEEEccceecCcccccccCCCCeeeecCCCceEEEEEEEEEeC
Q 017786 288 GVGKVFHSE-PIIYHNRNENPGCMVEGQTFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHTILITR 357 (366)
Q Consensus 288 gIG~~~he~-P~i~~~~~~~~~~l~~GmvftiEP~i~~~~~~~~~~~d~wt~~t~dg~~~a~~EdtvlVTe 357 (366)
|||+.+|+. |+|.. .+++.+|++||||+|||+++.. ++.+++++||||+|||
T Consensus 155 ~iG~~~~~~~P~i~~--~~~~~~l~~gmv~~iep~~~~~----------------~~~~g~~~ed~v~Vte 207 (207)
T PF00557_consen 155 GIGLEFHEPGPNIAR--PGDDTVLEPGMVFAIEPGLYFI----------------PGWGGVRFEDTVLVTE 207 (207)
T ss_dssp EESSSSSEEEEEESS--TTTSSB--TTBEEEEEEEEEEE----------------TTSEEEEEBEEEEEES
T ss_pred cccccccccceeeec--ccccceecCCCceeEeeeEEcc----------------CCCcEEEEEEEEEECc
Confidence 999999997 99853 2477899999999999988732 1346999999999997
No 27
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor.
Probab=100.00 E-value=1.4e-40 Score=309.48 Aligned_cols=226 Identities=17% Similarity=0.212 Sum_probs=192.5
Q ss_pred HHHHHHHHHHHHHHHHHHhH-----hccCC--ccHHHHHHHHHHHHHHhCCC-----CCCCCCCCCCCeeeecCCC-Ccc
Q 017786 129 IAKMRAACELAARVLDAAGK-----LVRPS--VTTNEIDKAVHQMIIEAGAY-----PSPLGYGGFPKSVCTSVNE-CMC 195 (366)
Q Consensus 129 I~~~R~A~~ia~~~l~~~~~-----~i~pG--vTe~ei~~~~~~~~~~~G~~-----ps~~~~~~fp~~v~~g~n~-~~~ 195 (366)
++.+|+|++++..+|..... .|.+| +|+.+|+..++..+.+.+.. |..+. ..|++++++|.|. ..+
T Consensus 1 ~~~~~~a~~~~~~~~~~~~~~~~~~~id~~~~~t~~~l~~~~e~~~~~~~~~~~~~~~~~~~-~~y~~iv~sG~~~~~l~ 79 (243)
T cd01091 1 LNNIKKASDATVDVLKKFFVDEVEEIIDQEKKVTHSKLSDKVEKAIEDKKKYKAKLDPEQLD-WCYPPIIQSGGNYDLLK 79 (243)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHhCchhhhcCCCHHHcC-cccCCeEeECcCcccCC
Confidence 46899999999999976655 89999 99999999999999988744 22222 3699999999998 899
Q ss_pred cCCCCCCCCCCCCEEEEEeccccCcEEeceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHH
Q 017786 196 HGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEK 275 (366)
Q Consensus 196 h~~p~~~~l~~GDiv~iD~g~~~~GY~~D~sRT~~vG~~~~e~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~ai~~~~~~ 275 (366)
|+.++++.++.|++|.+|+|++|+|||+|++|||++| ++++++++|++++++++++++.+|||++++||++++.+++++
T Consensus 80 h~~~s~~~~~~~~~vl~d~G~~y~gY~sditRT~~v~-p~~~~~~~y~~~~~a~~~~i~~lkpG~~~~dv~~~a~~~i~~ 158 (243)
T cd01091 80 SSSSSDKLLYHFGVIICSLGARYKSYCSNIARTFLID-PTSEQQKNYNFLLALQEEILKELKPGAKLSDVYQKTLDYIKK 158 (243)
T ss_pred CCCCCccccCCCCEEEEEeCcccCCEeecceEEEEcC-CCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999997 799999999999999999999999999999999999999999
Q ss_pred cCCCcc---CCceeeccCCccccCCccccCCCCCCccccCCcEEEEccceecCcccccccCCCCeeeecCCCceEEEEEE
Q 017786 276 YGFGVV---ERFVGHGVGKVFHSEPIIYHNRNENPGCMVEGQTFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHT 352 (366)
Q Consensus 276 ~G~~~~---~~~~GHgIG~~~he~P~i~~~~~~~~~~l~~GmvftiEP~i~~~~~~~~~~~d~wt~~t~dg~~~a~~Edt 352 (366)
.|.... .+.+|||||+++||.|.+.. .+++.+|++||||+|||+++... +.+....+++.+++++|||
T Consensus 159 ~~~~~~~~~~~~~GHgiGle~hE~~~~l~--~~~~~~L~~GMvf~vepGi~~~~-------~~~~~~~~~~~~gv~ieDt 229 (243)
T cd01091 159 KKPELEPNFTKNLGFGIGLEFRESSLIIN--AKNDRKLKKGMVFNLSIGFSNLQ-------NPEPKDKESKTYALLLSDT 229 (243)
T ss_pred hChhHHHhCcCCcccccCcccccCccccC--CCCCCCcCCCCEEEEeCCccccc-------CccccCccCCeeEEEEEEE
Confidence 875433 45599999999999886533 24568999999999999998321 1111111235689999999
Q ss_pred EEEeCCce-EeCCC
Q 017786 353 ILITRTGA-EILTI 365 (366)
Q Consensus 353 vlVTedG~-EiLT~ 365 (366)
|+||++|+ |+||.
T Consensus 230 V~Vt~~G~~~~LT~ 243 (243)
T cd01091 230 ILVTEDEPAIVLTN 243 (243)
T ss_pred EEEcCCCCceecCC
Confidence 99999999 99985
No 28
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4. Family members have been implicated in cell cycle control.
Probab=100.00 E-value=1.9e-40 Score=306.14 Aligned_cols=216 Identities=25% Similarity=0.407 Sum_probs=182.1
Q ss_pred HHHHHHHHHHHHHHHHHHhHhccCCccHHHHHHHHHHHHHHhC--CCCC-CCCCCCCCCeeeecCCCCcccCCC----CC
Q 017786 129 IAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAG--AYPS-PLGYGGFPKSVCTSVNECMCHGIP----DS 201 (366)
Q Consensus 129 I~~~R~A~~ia~~~l~~~~~~i~pGvTe~ei~~~~~~~~~~~G--~~ps-~~~~~~fp~~v~~g~n~~~~h~~p----~~ 201 (366)
+++||+|++|++++++++.+.++||+||.||+..+++++.+.. .++. ..++.+++...+++.|+..+|+.| ++
T Consensus 1 ~~~~r~A~~I~~~~~~~~~~~i~pG~te~ei~~~~e~~i~~~~~~~~~~~~~g~~g~~~~~~v~~n~~~~H~~p~~~~~~ 80 (228)
T cd01089 1 VTKYKTAGQIANKVLKQVISLCVPGAKVVDLCEKGDKLILEELGKVYKKEKKLEKGIAFPTCISVNNCVCHFSPLKSDAT 80 (228)
T ss_pred CHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccccCcccccCCCCcCeEeccCceeecCCCCCCCCC
Confidence 4689999999999999999999999999999988888887742 2322 122223333334557999999986 67
Q ss_pred CCCCCCCEEEEEeccccCcEEeceeeEEEccCCCH-----HHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHc
Q 017786 202 RQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSD-----GLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKY 276 (366)
Q Consensus 202 ~~l~~GDiv~iD~g~~~~GY~~D~sRT~~vG~~~~-----e~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~ai~~~~~~~ 276 (366)
++|++||+|+||+|+.|+||++|++|||++|++++ +++++++++.++++++++.+|||++++||+++++++++++
T Consensus 81 ~~l~~Gd~v~iD~g~~~~GY~sD~tRT~~vG~~~~~~~~~~~~~~~~~~~ea~~~~~~~~kpG~~~~dv~~a~~~~~~~~ 160 (228)
T cd01089 81 YTLKDGDVVKIDLGCHIDGYIAVVAHTIVVGAEAETPVTGKKADVIAAAHYALEAALRLLRPGNQNSDITEAIQKVIVDY 160 (228)
T ss_pred cccCCCCEEEEEEEEEECCEEEEEEEEEEeCCcCccccchHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHc
Confidence 89999999999999999999999999999999875 8999999999999999999999999999999999999999
Q ss_pred CCCccCCceeeccCCccccCCccccCCCCCCccccCCcEEEEccceecCcccccccCCCCeeeecCCCceEEEEEEEEEe
Q 017786 277 GFGVVERFVGHGVGKVFHSEPIIYHNRNENPGCMVEGQTFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHTILIT 356 (366)
Q Consensus 277 G~~~~~~~~GHgIG~~~he~P~i~~~~~~~~~~l~~GmvftiEP~i~~~~~~~~~~~d~wt~~t~dg~~~a~~EdtvlVT 356 (366)
||.++..+++|++|..++..|.-. .-..+|++||||++||.++.+ |.+++++||||+||
T Consensus 161 G~~~~~~~~~h~~g~~~~~~~~~~----~~~~~l~~gmvf~~ep~~~~~-----------------g~~~~~~~~Tv~vt 219 (228)
T cd01089 161 GCTPVEGVLSHQLKRVVSSGEGKA----KLVECVKHGLLFPYPVLYEKE-----------------GEVVAQFKLTVLLT 219 (228)
T ss_pred CCEEecCccccCcCceEecCCCCc----cchhhccCCcccccceeEccC-----------------CCeEEEEEEEEEEc
Confidence 999888999888887433222100 124689999999999999763 67899999999999
Q ss_pred CCceEeCCC
Q 017786 357 RTGAEILTI 365 (366)
Q Consensus 357 edG~EiLT~ 365 (366)
++|+|+||.
T Consensus 220 ~~G~e~lt~ 228 (228)
T cd01089 220 PNGVTVLTG 228 (228)
T ss_pred CCCCeeCCC
Confidence 999999984
No 29
>TIGR00501 met_pdase_II methionine aminopeptidase, type II. Methionine aminopeptidase (map) is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. The role of this protein in general is to produce the mature amino end of cytosolic proteins by removing the N-terminal methionine. This model describes type II, among which the eukaryotic members typically have an N-terminal extension not present in archaeal members. It can act cotranslationally. The enzyme from rat has been shown to associate with translation initiation factor 2 (IF-2) and may have a role in translational regulation.
Probab=100.00 E-value=4.4e-40 Score=314.35 Aligned_cols=229 Identities=31% Similarity=0.481 Sum_probs=198.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHhccCCccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCeeeecCCCCcccCCCC---CC
Q 017786 126 SESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPD---SR 202 (366)
Q Consensus 126 ~~EI~~~R~A~~ia~~~l~~~~~~i~pGvTe~ei~~~~~~~~~~~G~~ps~~~~~~fp~~v~~g~n~~~~h~~p~---~~ 202 (366)
-+||++||+|+++++++++.+.+.++||+|+.||++.+++.+.+.|+.+ +||+.+ +.|++.+|+.|. ++
T Consensus 2 ~~~i~~~r~A~~I~~~~~~~~~~~i~~G~se~el~~~~e~~~~~~g~~~------aFp~~v--s~n~~~~H~~p~~~d~~ 73 (295)
T TIGR00501 2 IERAEKWIEAGKIHSKVRREAADRIVPGVKLLEVAEFVENRIRELGAEP------AFPCNI--SINECAAHFTPKAGDKT 73 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHcCCCC------CCCcce--ecCCEeeCCCCCCCcCc
Confidence 4799999999999999999999999999999999999999999999986 488765 478999999985 67
Q ss_pred CCCCCCEEEEEeccccCcEEeceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCccC
Q 017786 203 QLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGVVE 282 (366)
Q Consensus 203 ~l~~GDiv~iD~g~~~~GY~~D~sRT~~vG~~~~e~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~ai~~~~~~~G~~~~~ 282 (366)
+|++||+|+||+|+.++||++|++||+++|+ ..+++++++++|++++++.+|||++++||+++++++++++||..+.
T Consensus 74 ~l~~GDvV~iD~G~~~dGY~aD~arT~~vG~---~~~~l~~a~~~A~~aai~~~kPGv~~~dV~~ai~~vi~~~G~~~i~ 150 (295)
T TIGR00501 74 VFKDGDVVKLDLGAHVDGYIADTAITVDLGD---QYDNLVKAAKDALYTAIKEIRAGVRVGEIGKAIQEVIESYGVKPIS 150 (295)
T ss_pred cCCCCCEEEEEEeEEECCEEEEEEEEEEeCc---HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCeeec
Confidence 8999999999999999999999999999985 3689999999999999999999999999999999999999999888
Q ss_pred CceeeccCC-ccccCCccccCCCCCCccccCCcEEEEccceecCccccc-------------------------------
Q 017786 283 RFVGHGVGK-VFHSEPIIYHNRNENPGCMVEGQTFTIEPILTMGSIECI------------------------------- 330 (366)
Q Consensus 283 ~~~GHgIG~-~~he~P~i~~~~~~~~~~l~~GmvftiEP~i~~~~~~~~------------------------------- 330 (366)
+++|||+|. ..|+.+.++.....++.+|++||||+|||+++.+.....
T Consensus 151 ~~~GHgig~~~~h~g~~ip~i~~~~~~~le~GmV~aIEP~~~~G~G~v~~~~~~~iy~~~~~~~~k~~~~r~~l~~i~~~ 230 (295)
T TIGR00501 151 NLTGHSMAPYRLHGGKSIPNVKERDTTKLEEGDVVAIEPFATDGVGYVTDGGEVSIYAFLAERPVRLDSARNLLKTIDEN 230 (295)
T ss_pred CCCCcceecccccCCCccCeecCCCCCEeCCCCEEEEceeEECCcCeEecCCCeEEEeECCCCCCCCHHHHHHHHHHHHH
Confidence 999999995 778886665444456789999999999998875432211
Q ss_pred --------ccCCC---------------------Cee-eecCCCceEEEEEEEEEeCCceEeCCC
Q 017786 331 --------TWPDN---------------------WTT-LTADGNPAAQFEHTILITRTGAEILTI 365 (366)
Q Consensus 331 --------~~~d~---------------------wt~-~t~dg~~~a~~EdtvlVTedG~EiLT~ 365 (366)
.|-+. +.+ ..++|++.+||||||+|+++|++++|.
T Consensus 231 ~~~~pF~~r~l~~~~~~~~~~~l~~~~~~~~~~~yp~l~e~~g~~vaq~~~Tv~v~~~g~~~~t~ 295 (295)
T TIGR00501 231 YGTLPFARRWLDKLGDEKYLFALNNLIRHGLIYDYPVLNEISGGYVAQWEHTILVEEHGKEVTTK 295 (295)
T ss_pred CCCCCcchhHhcccchhHHHHHHHHHHHCCCccCCCccEeeCCCEEEEEEEEEEECCCccEEcCC
Confidence 11111 111 145788999999999999999999985
No 30
>cd01088 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=100.00 E-value=4.9e-40 Score=313.68 Aligned_cols=226 Identities=31% Similarity=0.509 Sum_probs=197.9
Q ss_pred HHHHHHHHHHHHHHHHHHhHhccCCccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCeeeecCCCCcccCCCCC---CCCC
Q 017786 129 IAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDS---RQLQ 205 (366)
Q Consensus 129 I~~~R~A~~ia~~~l~~~~~~i~pGvTe~ei~~~~~~~~~~~G~~ps~~~~~~fp~~v~~g~n~~~~h~~p~~---~~l~ 205 (366)
+++||+|+++++++++++.+.++||+||.||++.+++.+.++|+.++ ||. ++|.|+..+|+.|+. ++|+
T Consensus 1 ~~~~r~Aa~I~~~a~~~~~~~i~pG~te~ei~~~~~~~i~~~G~~~a------fp~--~is~n~~~~H~~p~~~d~~~l~ 72 (291)
T cd01088 1 LEKYREAGEIHRQVRKYAQSLIKPGMTLLEIAEFVENRIRELGAGPA------FPV--NLSINECAAHYTPNAGDDTVLK 72 (291)
T ss_pred CHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCC------CCc--eeccCCEeeCCCCCCCCCcccC
Confidence 36899999999999999999999999999999999999999998654 775 468899999999863 8899
Q ss_pred CCCEEEEEeccccCcEEeceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCccCCce
Q 017786 206 DGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGVVERFV 285 (366)
Q Consensus 206 ~GDiv~iD~g~~~~GY~~D~sRT~~vG~~~~e~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~ai~~~~~~~G~~~~~~~~ 285 (366)
+||+|.||+|+.++||++|++||+++|+ +++++++++++|++++++.+|||++++||+++++++++++||..+.+++
T Consensus 73 ~GDvV~iD~G~~~dGY~sD~arT~~vg~---~~~~l~ea~~~A~~~ai~~ikPG~~~~dV~~ai~~~i~~~G~~~~~~~~ 149 (291)
T cd01088 73 EGDVVKLDFGAHVDGYIADSAFTVDFDP---KYDDLLEAAKEALNAAIKEAGPDVRLGEIGEAIEEVIESYGFKPIRNLT 149 (291)
T ss_pred CCCEEEEEEEEEECCEEEEEEEEEecCh---hHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCEEeecCC
Confidence 9999999999999999999999999985 7889999999999999999999999999999999999999999888999
Q ss_pred eeccCC-ccccCCccccCCCCCCccccCCcEEEEccceecCccccc----------------------------------
Q 017786 286 GHGVGK-VFHSEPIIYHNRNENPGCMVEGQTFTIEPILTMGSIECI---------------------------------- 330 (366)
Q Consensus 286 GHgIG~-~~he~P~i~~~~~~~~~~l~~GmvftiEP~i~~~~~~~~---------------------------------- 330 (366)
|||||. .+|+.|.|+.....++.+|++||||+|||+++.+.....
T Consensus 150 GHgig~~~~h~~~~ip~~~~~~~~~le~gmV~aIEp~~s~G~G~v~~~~~~~iy~~~~~~~~~~~~~r~~~~~i~~~~~~ 229 (291)
T cd01088 150 GHSIERYRLHAGKSIPNVKGGEGTRLEEGDVYAIEPFATTGKGYVHDGPECSIYMLNRDKPLRLPRARKLLDVIYENFGT 229 (291)
T ss_pred ccCccCccccCCCccCccCCCCCCEeCCCCEEEEceeEECCCCeeecCCceEEEEEcCCCCCCCHHHHHHHHHHHHHCCC
Confidence 999995 789998876655556789999999999999876543311
Q ss_pred -----ccCC---------------------CCeee-ecCCCceEEEEEEEEEeCCceEeCCC
Q 017786 331 -----TWPD---------------------NWTTL-TADGNPAAQFEHTILITRTGAEILTI 365 (366)
Q Consensus 331 -----~~~d---------------------~wt~~-t~dg~~~a~~EdtvlVTedG~EiLT~ 365 (366)
.|-+ .+.+. .++|+..+||||||+||++|++++|+
T Consensus 230 ~pF~~r~l~~~~~~~~~~~~~~~~~~~~~~~y~~l~e~~g~~vaq~~~T~~v~~~g~~~~t~ 291 (291)
T cd01088 230 LPFARRWLDRLGETKLLMALKNLCKAGIVYPYPVLKEISGGYVAQFEHTIIVREDGKEVTTR 291 (291)
T ss_pred CCcChHHhhccchhhHHHHHHHHHHCCCcccCCccEeeCCCeEEEEEEEEEECCCCcEecCC
Confidence 1111 11221 45799999999999999999999985
No 31
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate specificity compared to other metallo-aminopeptidases, suggesting they play roles in regulation of biological processes rather than general protein degradation.
Probab=100.00 E-value=6.2e-40 Score=294.97 Aligned_cols=206 Identities=31% Similarity=0.543 Sum_probs=190.9
Q ss_pred HHHHHHHHHHHHHHHHHHhHhccCCccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCeeeecCCCCcccCCCCCCCCCCCC
Q 017786 129 IAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGD 208 (366)
Q Consensus 129 I~~~R~A~~ia~~~l~~~~~~i~pGvTe~ei~~~~~~~~~~~G~~ps~~~~~~fp~~v~~g~n~~~~h~~p~~~~l~~GD 208 (366)
|+.||+|+++++++++++.+.++||+||.||.+.+++.+.++|+++ .|+..+++|.|...+|+.|+++++++||
T Consensus 1 i~~~r~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~g~~~------~~~~~v~~g~~~~~~h~~~~~~~i~~gd 74 (207)
T cd01066 1 IARLRKAAEIAEAAMAAAAEAIRPGVTEAEVAAAIEQALRAAGGYP------AGPTIVGSGARTALPHYRPDDRRLQEGD 74 (207)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHcCCCC------CCCcEEEECccccCcCCCCCCCCcCCCC
Confidence 5789999999999999999999999999999999999999999943 3677888888888999999999999999
Q ss_pred EEEEEeccccCcEEeceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCC-CccCCceee
Q 017786 209 IINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGF-GVVERFVGH 287 (366)
Q Consensus 209 iv~iD~g~~~~GY~~D~sRT~~vG~~~~e~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~ai~~~~~~~G~-~~~~~~~GH 287 (366)
+|++|+++.++||++|++||+++|+++++++++++.+.++++++++.+|||+++.||+++++++++++|+ ....+++||
T Consensus 75 ~v~~d~g~~~~gy~~d~~rt~~~g~~~~~~~~~~~~~~~~~~~~~~~i~pG~~~~ei~~~~~~~~~~~g~~~~~~~~~Gh 154 (207)
T cd01066 75 LVLVDLGGVYDGYHADLTRTFVIGEPSDEQRELYEAVREAQEAALAALRPGVTAEEVDAAAREVLEEHGLGPNFGHRTGH 154 (207)
T ss_pred EEEEEeceeECCCccceeceeEcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCccccCCCCCcc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999 456788999
Q ss_pred ccCCccccCCccccCCCCCCccccCCcEEEEccceecCcccccccCCCCeeeecCCCceEEEEEEEEEeCCce
Q 017786 288 GVGKVFHSEPIIYHNRNENPGCMVEGQTFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHTILITRTGA 360 (366)
Q Consensus 288 gIG~~~he~P~i~~~~~~~~~~l~~GmvftiEP~i~~~~~~~~~~~d~wt~~t~dg~~~a~~EdtvlVTedG~ 360 (366)
+||+..|+.|.+.. +.+.+|++||||+|||+++.+ +.+++++||||+||++|+
T Consensus 155 ~iG~~~~e~~~~~~---~~~~~l~~gmv~~iep~~~~~-----------------~~~g~~~ed~v~vt~~g~ 207 (207)
T cd01066 155 GIGLEIHEPPVLKA---GDDTVLEPGMVFAVEPGLYLP-----------------GGGGVRIEDTVLVTEDGP 207 (207)
T ss_pred ccCcccCCCCCcCC---CCCCCcCCCCEEEECCEEEEC-----------------CCcEEEeeeEEEEeCCCC
Confidence 99999999998543 466799999999999999864 347899999999999985
No 32
>KOG2414 consensus Putative Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-38 Score=302.77 Aligned_cols=233 Identities=22% Similarity=0.325 Sum_probs=208.5
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHHHHHHHHHhHhccCCccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCeeeecCCCCc
Q 017786 115 PDLSPEYQIHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECM 194 (366)
Q Consensus 115 ~~l~~~R~iKs~~EI~~~R~A~~ia~~~l~~~~~~i~pGvTe~ei~~~~~~~~~~~G~~ps~~~~~~fp~~v~~g~n~~~ 194 (366)
..+.++|.|||++|+++||.||.|+.+++-..+-.-|+...|..+.+.++..++.+|+.- ..||+.|+.|.|...
T Consensus 220 ~li~~lRlIKSpaEl~~Mr~a~~I~sq~~~~~m~~sr~~~~E~~l~a~~eye~r~rGad~-----~AYpPVVAgG~na~t 294 (488)
T KOG2414|consen 220 NLIERLRLIKSPAELELMREACNIASQTFSETMFGSRDFHNEAALSALLEYECRRRGADR-----LAYPPVVAGGKNANT 294 (488)
T ss_pred HHHHHHHccCCHHHHHHHHHHhhhhhHHHHHHHhhccCCcchhhHhhhhhhheeecCccc-----cccCCeeecCcccce
Confidence 456789999999999999999999999999999999999999999999999999999975 369999999999999
Q ss_pred ccCCCCCCCCCCCCEEEEEeccccCcEEeceeeEEEc-cCCCHHHHHHHHHHHHHHHHHHHhcCC--CCcHHHHHHHHHH
Q 017786 195 CHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLC-GNVSDGLKRLVKVTEECLEKGIAVCKD--GASFKKIGKRISE 271 (366)
Q Consensus 195 ~h~~p~~~~l~~GDiv~iD~g~~~~GY~~D~sRT~~v-G~~~~e~~~l~~~~~ea~~~ai~~~kP--G~~~~dI~~ai~~ 271 (366)
.|+.-++..|.++|+|++|.|+.++||.+|++|||.+ |..++.|++||+++.+.++..|+.|+| |.++.+|+....+
T Consensus 295 IHY~~Nnq~l~d~emVLvDaGcelgGYvSDITRTWP~sGkFs~~Qr~LYeavL~vq~ecik~c~~~~g~sL~~l~~~s~~ 374 (488)
T KOG2414|consen 295 IHYVRNNQLLKDDEMVLVDAGCELGGYVSDITRTWPISGKFSDAQRDLYEAVLQVQEECIKYCKPSNGTSLSQLFERSNE 374 (488)
T ss_pred EEEeecccccCCCcEEEEecCcccCceEccceeccCCCCccCcHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHH
Confidence 9999999999999999999999999999999999999 999999999999999999999999999 9999999987655
Q ss_pred HH----HHcCC------------CccCCceeeccCCccccCCccccCCCCCCccccCCcEEEEccceecCcccccccCCC
Q 017786 272 HA----EKYGF------------GVVERFVGHGVGKVFHSEPIIYHNRNENPGCMVEGQTFTIEPILTMGSIECITWPDN 335 (366)
Q Consensus 272 ~~----~~~G~------------~~~~~~~GHgIG~~~he~P~i~~~~~~~~~~l~~GmvftiEP~i~~~~~~~~~~~d~ 335 (366)
.+ ++.|. ...+|.+||-+|+++|+-|.+.. +.+|+|||||||||++|.|... .|+..
T Consensus 375 Ll~~~Lk~lGI~kt~~ee~~~~~klcPHhVgHyLGmDVHD~p~v~r-----~~pL~pg~ViTIEPGvYIP~d~--d~P~~ 447 (488)
T KOG2414|consen 375 LLGQELKELGIRKTDREEMIQAEKLCPHHVGHYLGMDVHDCPTVSR-----DIPLQPGMVITIEPGVYIPEDD--DPPEE 447 (488)
T ss_pred HHHHHHHHhCcccchHHHHHhhhhcCCcccchhcCcccccCCCCCC-----CccCCCCceEEecCceecCccC--CCchH
Confidence 44 44453 23578899999999999999864 5689999999999999998532 23322
Q ss_pred CeeeecCCCceEEEEEEEEEeCCceEeCCC
Q 017786 336 WTTLTADGNPAAQFEHTILITRTGAEILTI 365 (366)
Q Consensus 336 wt~~t~dg~~~a~~EdtvlVTedG~EiLT~ 365 (366)
+ .+.|+|+||.|+|+|||.|+||.
T Consensus 448 F------rGIGiRIEDDV~i~edg~evLT~ 471 (488)
T KOG2414|consen 448 F------RGIGIRIEDDVAIGEDGPEVLTA 471 (488)
T ss_pred h------cCceEEeecceEeccCCceeehh
Confidence 2 56899999999999999999994
No 33
>KOG2737 consensus Putative metallopeptidase [General function prediction only]
Probab=100.00 E-value=6.1e-34 Score=267.87 Aligned_cols=247 Identities=19% Similarity=0.217 Sum_probs=203.2
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHHHHHHHHHhHhccCCccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCeeeecCCCCc
Q 017786 115 PDLSPEYQIHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECM 194 (366)
Q Consensus 115 ~~l~~~R~iKs~~EI~~~R~A~~ia~~~l~~~~~~i~pGvTe~ei~~~~~~~~~~~G~~ps~~~~~~fp~~v~~g~n~~~ 194 (366)
+++.+.|.|||+.||+.||.|++|+++++.++++.++||+.|.++...+......+|+... .+|..++|+|.|..+
T Consensus 177 p~m~E~RviKs~~EieviRya~kISseaH~~vM~~~~pg~~Eyq~eslF~hh~y~~GGcRh----~sYtcIc~sG~ns~v 252 (492)
T KOG2737|consen 177 PILAECRVIKSSLEIEVIRYANKISSEAHIEVMRAVRPGMKEYQLESLFLHHSYSYGGCRH----LSYTCICASGDNSAV 252 (492)
T ss_pred HHHhhheeeCCHHHHHHHHHHHhhccHHHHHHHHhCCchHhHHhHHHHHHHhhhccCCccc----cccceeeecCCCcce
Confidence 5788999999999999999999999999999999999999999999999999998887443 357889999999999
Q ss_pred ccC----CCCCCCCCCCCEEEEEeccccCcEEeceeeEEEc-cCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHH
Q 017786 195 CHG----IPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLC-GNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRI 269 (366)
Q Consensus 195 ~h~----~p~~~~l~~GDiv~iD~g~~~~GY~~D~sRT~~v-G~~~~e~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~ai 269 (366)
.|+ .|+++.||.||.+++|+|+.|.+|.+|++++|.. |+.+++|+.+|+++.+++.++++++|||+...|++...
T Consensus 253 LHYgha~apNd~~iqdgd~cLfDmGaey~~yaSDITcsFP~nGKFTadqk~VYnaVLda~navm~a~KpGv~W~Dmh~La 332 (492)
T KOG2737|consen 253 LHYGHAGAPNDRTIQDGDLCLFDMGAEYHFYASDITCSFPVNGKFTADQKLVYNAVLDASNAVMEAMKPGVWWVDMHKLA 332 (492)
T ss_pred eeccccCCCCCcccCCCCEEEEecCcceeeeecccceeccCCCccchhHHHHHHHHHHHHHHHHHhcCCCCccccHHHHH
Confidence 998 7999999999999999999999999999999999 99999999999999999999999999999999999766
Q ss_pred HHHH----HHcCC---------------CccCCceeeccCCccccCCccc-cC-CC--------CCCccccCCcEEEEcc
Q 017786 270 SEHA----EKYGF---------------GVVERFVGHGVGKVFHSEPIIY-HN-RN--------ENPGCMVEGQTFTIEP 320 (366)
Q Consensus 270 ~~~~----~~~G~---------------~~~~~~~GHgIG~~~he~P~i~-~~-~~--------~~~~~l~~GmvftiEP 320 (366)
.+++ ++.|. ...+|-.||-+|+.+|+-.-.+ .. ++ ...+.|++|||+|+||
T Consensus 333 ~kvlle~laq~gIl~gdvd~m~~ar~~~vF~PHGLGH~lGlDvHDvGGyp~~~~rp~~P~l~~LR~aR~L~e~MviTvEP 412 (492)
T KOG2737|consen 333 EKVLLEHLAQMGILKGDVDEMVEARLGAVFMPHGLGHFLGLDVHDVGGYPEGVERPDEPGLRSLRTARHLKEGMVITVEP 412 (492)
T ss_pred HHHHHHHHHhcCceeccHHHHHHhccCeeeccccccccccccccccCCCCCCCCCCCcchhhhhhhhhhhhcCcEEEecC
Confidence 5543 33332 1246779999999999643222 11 11 2345899999999999
Q ss_pred ceecCccccc-ccCCCC-------eee-ecCCCceEEEEEEEEEeCCceEeCCC
Q 017786 321 ILTMGSIECI-TWPDNW-------TTL-TADGNPAAQFEHTILITRTGAEILTI 365 (366)
Q Consensus 321 ~i~~~~~~~~-~~~d~w-------t~~-t~dg~~~a~~EdtvlVTedG~EiLT~ 365 (366)
+.|.-..-.. .+.|.- .+. -..+.+|+|+||.|+||++|+|.||.
T Consensus 413 GcYFi~~Ll~ealadp~~~~f~n~e~~~rfr~~GGVRIEdDv~vt~~G~enlt~ 466 (492)
T KOG2737|consen 413 GCYFIDFLLDEALADPARAEFLNREVLQRFRGFGGVRIEDDVVVTKSGIENLTC 466 (492)
T ss_pred ChhHHHHHHHHHhcChHhhhhhhHHHHHHhhccCceEeeccEEEeccccccccC
Confidence 9996432111 011110 000 12477899999999999999999985
No 34
>KOG1189 consensus Global transcriptional regulator, cell division control protein [Amino acid transport and metabolism]
Probab=99.91 E-value=1.3e-23 Score=211.87 Aligned_cols=250 Identities=18% Similarity=0.274 Sum_probs=200.2
Q ss_pred CCCCCCCCCCccCCCCCCCCccccCCCHHHHHHHHHHHHHHHHHHHHH-----hHhccCC--ccHHHHHHHHHHHHHHh-
Q 017786 99 VPDHIPKPPYVSSTSLPDLSPEYQIHDSESIAKMRAACELAARVLDAA-----GKLVRPS--VTTNEIDKAVHQMIIEA- 170 (366)
Q Consensus 99 vp~~i~~p~y~~~~~~~~l~~~R~iKs~~EI~~~R~A~~ia~~~l~~~-----~~~i~pG--vTe~ei~~~~~~~~~~~- 170 (366)
+-+.+....|...+++-.+..+-.+|++.||+.+|+|++++...|... ..++..+ +|..-+...+..++.+.
T Consensus 113 W~~~l~~~~fn~vDis~~ls~l~avKDd~Ei~~irksa~~s~~vm~k~~~~~~~~aiD~ekkvthskLsD~~e~~I~~~k 192 (960)
T KOG1189|consen 113 WNKRLEAGGFNKVDISLGLSKLFAVKDDEEIANIRKSAAASSAVMNKYLVDELVEAIDEEKKVTHSKLSDLMESAIEDKK 192 (960)
T ss_pred HHHHhhhcCCceeehhhhhhhheeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhHHHHHHHHHHhhccc
Confidence 334455567777787777888999999999999999999999999833 3334444 67777777777777664
Q ss_pred ---CCCCCCCCCCCCCCeeeecCCCCc-ccCCCCCCCCCCCCEEEEEeccccCcEEeceeeEEEccCCCHHHHHHHHHHH
Q 017786 171 ---GAYPSPLGYGGFPKSVCTSVNECM-CHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTE 246 (366)
Q Consensus 171 ---G~~ps~~~~~~fp~~v~~g~n~~~-~h~~p~~~~l~~GDiv~iD~g~~~~GY~~D~sRT~~vG~~~~e~~~l~~~~~ 246 (366)
|..|..+. ..||+++.+|.+--. .....+++.| + +|...+|++|++||+.++|||.+ .|+.++++.|+...
T Consensus 193 ~s~~l~~~~~d-~cY~PIiqSGg~ydlk~sa~s~~~~L--~-~I~cs~G~RynsYCSNv~RT~Li-dpssemq~nY~fLl 267 (960)
T KOG1189|consen 193 YSPGLDPDLLD-MCYPPIIQSGGKYDLKPSAVSDDNHL--H-VILCSLGIRYNSYCSNVSRTYLI-DPSSEMQENYEFLL 267 (960)
T ss_pred cCcccCccccc-cccChhhhcCCccccccccccccccc--c-eEEeeccchhhhhhccccceeee-cchHHHHHHHHHHH
Confidence 44443333 348999988877543 3344567777 4 89999999999999999999999 68999999999999
Q ss_pred HHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCccCCc---eeeccCCccccCCccccCCCCCCccccCCcEEEEcccee
Q 017786 247 ECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGVVERF---VGHGVGKVFHSEPIIYHNRNENPGCMVEGQTFTIEPILT 323 (366)
Q Consensus 247 ea~~~ai~~~kPG~~~~dI~~ai~~~~~~~G~~~~~~~---~GHgIG~~~he~P~i~~~~~~~~~~l~~GmvftiEP~i~ 323 (366)
.+++++++.||||+..++||+++.+++++.+...+..| .|.|||++|.|..++... .++.+|++||||.|..++.
T Consensus 268 ~aqe~il~~lrpG~ki~dVY~~~l~~v~k~~Pel~~~~~k~lG~~iGlEFREssl~ina--Knd~~lk~gmvFni~lGf~ 345 (960)
T KOG1189|consen 268 AAQEEILKLLRPGTKIGDVYEKALDYVEKNKPELVPNFTKNLGFGIGLEFRESSLVINA--KNDRVLKKGMVFNISLGFS 345 (960)
T ss_pred HHHHHHHHhhcCCCchhHHHHHHHHHHHhcCcchhhhhhhhcccccceeeecccccccc--cchhhhccCcEEEEeeccc
Confidence 99999999999999999999999999999998876665 799999999999987653 4568999999999988775
Q ss_pred cCcccccccCCCCeeeecCCCceEEEEEEEEEeCCce-EeCCCC
Q 017786 324 MGSIECITWPDNWTTLTADGNPAAQFEHTILITRTGA-EILTIC 366 (366)
Q Consensus 324 ~~~~~~~~~~d~wt~~t~dg~~~a~~EdtvlVTedG~-EiLT~~ 366 (366)
.-. +. ...+.+++.+.|||+|+++++ ++||.+
T Consensus 346 nl~-------n~----~~~~~yaL~l~DTvlv~e~~p~~vLT~~ 378 (960)
T KOG1189|consen 346 NLT-------NP----ESKNSYALLLSDTVLVGEDPPAEVLTDS 378 (960)
T ss_pred ccc-------Cc----ccccchhhhccceeeecCCCcchhhccc
Confidence 321 10 112558899999999999997 999864
No 35
>KOG2413 consensus Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=99.86 E-value=6e-21 Score=190.27 Aligned_cols=226 Identities=17% Similarity=0.162 Sum_probs=185.7
Q ss_pred CCCCCccccCCCHHHHHHHHHHHHHHHHHHHHH----hHhccCC--ccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCeee
Q 017786 114 LPDLSPEYQIHDSESIAKMRAACELAARVLDAA----GKLVRPS--VTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVC 187 (366)
Q Consensus 114 ~~~l~~~R~iKs~~EI~~~R~A~~ia~~~l~~~----~~~i~pG--vTe~ei~~~~~~~~~~~G~~ps~~~~~~fp~~v~ 187 (366)
.+.+..++++|+.+|++.||.|---=..|+.+. -..+..| +||.+++..+++.-..+..+-. .+|+++.+
T Consensus 298 ~Spi~~~kAiKN~~E~~gmr~shirD~~Alve~~~wle~~~~~g~~itE~~~A~kle~fR~~~~~fmg----lSFeTIS~ 373 (606)
T KOG2413|consen 298 PSPISRAKAIKNDDELKGMRNSHIRDGAALVEYFAWLEKELHKGYTITEYDAADKLEEFRSRQDHFMG----LSFETISS 373 (606)
T ss_pred cCHHHHHHHhcChHHhhhhhhcchhhHHHHHHHHHHHhhhhhcCcccchhhHHHHHHHHHHhhccccC----cCcceeec
Confidence 455667889999999999998853333344333 3345566 8999999999988777655432 35999986
Q ss_pred e-cCCCCcccCCCC---CCCCCCCCEEEEEeccccCcEEeceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCC-CCcH
Q 017786 188 T-SVNECMCHGIPD---SRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKD-GASF 262 (366)
Q Consensus 188 ~-g~n~~~~h~~p~---~~~l~~GDiv~iD~g~~~~GY~~D~sRT~~vG~~~~e~~~l~~~~~ea~~~ai~~~kP-G~~~ 262 (366)
+ |.|.++.|+.|. ++.+.+..+.++|-|+.|.-=.+|++||+.+|+|++++++.|..+....-+...+.=| |...
T Consensus 374 s~G~NgAviHYsP~~e~n~~i~~~kiyL~DSGaQY~DGTTDvTRT~HfgePs~eek~~yT~VLkGhi~la~~vFP~~t~g 453 (606)
T KOG2413|consen 374 SVGPNGAVIHYSPPAETNRIVSPDKIYLCDSGAQYLDGTTDVTRTVHFGEPTAEEKEAYTLVLKGHIALARAVFPKGTKG 453 (606)
T ss_pred cCCCCceeeecCCCccccceecCceEEEEccCcccccCccceeEEEecCCCCHHHHHHHHHHHHhhhHhhhcccCCCCCc
Confidence 6 999999999985 4689999999999999987778999999999999999999999999998888877665 7778
Q ss_pred HHHHHHHHHHHHHcCCCccCCceeeccCC--ccccCCccccCC-CCCCccccCCcEEEEccceecCcccccccCCCCeee
Q 017786 263 KKIGKRISEHAEKYGFGVVERFVGHGVGK--VFHSEPIIYHNR-NENPGCMVEGQTFTIEPILTMGSIECITWPDNWTTL 339 (366)
Q Consensus 263 ~dI~~ai~~~~~~~G~~~~~~~~GHgIG~--~~he~P~i~~~~-~~~~~~l~~GmvftiEP~i~~~~~~~~~~~d~wt~~ 339 (366)
..+...++..+-+.|.. +.|-+|||||- .+||+|....++ -.+...|++||++++||+.|.
T Consensus 454 ~~lD~laR~~LW~~gLD-y~HgTGHGVG~fLnVhE~P~~is~r~~~~~~~l~ag~~~s~EPGYY~--------------- 517 (606)
T KOG2413|consen 454 SVLDALARSALWKAGLD-YGHGTGHGVGSFLNVHEGPIGIGYRPYSSNFPLQAGMVFSIEPGYYK--------------- 517 (606)
T ss_pred chhHHHHHHHHHhhccc-cCCCCCcccccceEeccCCceeeeeecCCCchhcCceEeccCCcccc---------------
Confidence 88888888889999986 78899999998 569999766555 256678999999999999986
Q ss_pred ecCCCceEEEEEEEEEeCCceE
Q 017786 340 TADGNPAAQFEHTILITRTGAE 361 (366)
Q Consensus 340 t~dg~~~a~~EdtvlVTedG~E 361 (366)
||.+|+|+|+.++|.+.+..
T Consensus 518 --dg~fGIRienv~~vvd~~~~ 537 (606)
T KOG2413|consen 518 --DGEFGIRIENVVEVVDAGTK 537 (606)
T ss_pred --cCcceEEEeeEEEEEecccc
Confidence 58899999999999877644
No 36
>KOG2775 consensus Metallopeptidase [General function prediction only]
Probab=99.86 E-value=7.6e-21 Score=174.78 Aligned_cols=233 Identities=26% Similarity=0.399 Sum_probs=189.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHhHhccCCccHHHHHHHHHHHHH----HhCCCCCCCCCCCCCCeeeecCCCCcccCCC
Q 017786 124 HDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMII----EAGAYPSPLGYGGFPKSVCTSVNECMCHGIP 199 (366)
Q Consensus 124 Ks~~EI~~~R~A~~ia~~~l~~~~~~i~pGvTe~ei~~~~~~~~~----~~G~~ps~~~~~~fp~~v~~g~n~~~~h~~p 199 (366)
-..+...-+|+|+++-+++-+++.+.|+||||-.||+..++...+ +.|... .-+||+. .|.|.+..|+.|
T Consensus 80 ~~~~i~~d~rraAE~HRqvR~yv~s~ikPGmtm~ei~e~iEnttR~li~e~gl~a----Gi~FPtG--~SlN~cAAHyTp 153 (397)
T KOG2775|consen 80 TESDIYQDLRRAAEAHRQVRKYVQSIIKPGMTMIEICETIENTTRKLILENGLNA----GIGFPTG--CSLNHCAAHYTP 153 (397)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHhccccc----cccCCCc--ccccchhhhcCC
Confidence 455667889999999999999999999999999999998886544 334332 2358865 578999999998
Q ss_pred C---CCCCCCCCEEEEEeccccCcEEeceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHc
Q 017786 200 D---SRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKY 276 (366)
Q Consensus 200 ~---~~~l~~GDiv~iD~g~~~~GY~~D~sRT~~vG~~~~e~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~ai~~~~~~~ 276 (366)
+ ..+|+.+|++.||+|...+|-..|++.|+.+ ++....|+.+++++...+|+...-.++.+||+++|+++++++
T Consensus 154 NaGd~tVLqydDV~KiDfGthi~GrIiDsAFTv~F---~p~~d~Ll~AvreaT~tGIkeaGiDvRlcdiG~aiqEVmeSy 230 (397)
T KOG2775|consen 154 NAGDKTVLKYDDVMKIDFGTHIDGRIIDSAFTVAF---NPKYDPLLAAVREATNTGIKEAGIDVRLCDIGEAIQEVMESY 230 (397)
T ss_pred CCCCceeeeecceEEEeccccccCeEeeeeeEEee---CccccHHHHHHHHHHhhhhhhcCceeeehhhhHHHHHHhhhe
Confidence 5 4679999999999999999999999999987 566778999999999999999999999999999999999997
Q ss_pred CCC---------ccCCceeeccCC-ccccCCccccCCCCCCccccCCcEEEEccceecCccc------------------
Q 017786 277 GFG---------VVERFVGHGVGK-VFHSEPIIYHNRNENPGCMVEGQTFTIEPILTMGSIE------------------ 328 (366)
Q Consensus 277 G~~---------~~~~~~GHgIG~-~~he~P~i~~~~~~~~~~l~~GmvftiEP~i~~~~~~------------------ 328 (366)
-.. +++++.||.|+. .+|..-.++...+++.+.|++|.+|+||..-+.|...
T Consensus 231 EvEi~Gk~~~VKpIrnLnGHSI~~yrIH~gksVPiVkgge~trmee~e~yAIETFgSTGkG~v~ddmecSHymkn~~~~~ 310 (397)
T KOG2775|consen 231 EVEINGKTYQVKPIRNLNGHSIAQYRIHGGKSVPIVKGGEQTRMEEGEIYAIETFGSTGKGYVHDDMECSHYMKNFELGH 310 (397)
T ss_pred EEEeCCceecceeccccCCCcccceEeecCcccceecCCcceeecCCeeEEEEeeccCCcceecCCcccchhhhhccccc
Confidence 432 257889999998 4687766665566788999999999999866543211
Q ss_pred ------------------------ccccCCCC---------------eee-------ecCCCceEEEEEEEEEeCCceEe
Q 017786 329 ------------------------CITWPDNW---------------TTL-------TADGNPAAQFEHTILITRTGAEI 362 (366)
Q Consensus 329 ------------------------~~~~~d~w---------------t~~-------t~dg~~~a~~EdtvlVTedG~Ei 362 (366)
|..|.|.. +++ .-+|.+.+||||||+..+++-|+
T Consensus 311 vplrl~~~K~ll~~I~knfgTLaFcrR~lDrlGetKyLmAlk~Lc~~Giv~pyPPLcDi~G~ytAQfEHTIll~pt~KEV 390 (397)
T KOG2775|consen 311 VPLRLQRSKGLLNTIDKNFGTLAFCRRWLDRLGETKYLMALKNLCDMGIVQPYPPLCDIKGSYTAQFEHTILLSPTGKEV 390 (397)
T ss_pred cccccHHHHHHHHHHhhccccccccHHHHHHhhhHHHHHHHHhhhhcccccCCCcccccCcceeeeeceeeEecchhcch
Confidence 11222211 111 23699999999999999999999
Q ss_pred CCC
Q 017786 363 LTI 365 (366)
Q Consensus 363 LT~ 365 (366)
+|+
T Consensus 391 vsr 393 (397)
T KOG2775|consen 391 VSR 393 (397)
T ss_pred hcc
Confidence 985
No 37
>KOG2776 consensus Metallopeptidase [General function prediction only]
Probab=99.80 E-value=2.7e-18 Score=161.68 Aligned_cols=243 Identities=23% Similarity=0.376 Sum_probs=190.8
Q ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHHhHhccCCccHHHHHHHHHHHHHHhC--CCCCC-CCC--CCCCCeeeecCCCCcc
Q 017786 121 YQIHDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAG--AYPSP-LGY--GGFPKSVCTSVNECMC 195 (366)
Q Consensus 121 R~iKs~~EI~~~R~A~~ia~~~l~~~~~~i~pGvTe~ei~~~~~~~~~~~G--~~ps~-~~~--~~fp~~v~~g~n~~~~ 195 (366)
..|-++.-+.++|.|++|+..+|+.+.++++||.+..||+...+.++.+.= .|-.. -.. -.||+ |+++|+++|
T Consensus 13 ~tia~~~vvtKYk~AgeI~n~~lk~V~~~~~~gasv~eiC~~GD~~i~E~t~kiYK~eK~~~KGIAfPT--~Isvnncv~ 90 (398)
T KOG2776|consen 13 KTIANDSVVTKYKMAGEIVNKVLKSVVELCQPGASVREICEKGDSLILEETGKIYKKEKDFEKGIAFPT--SISVNNCVC 90 (398)
T ss_pred cccccHHHHhhhhhHHHHHHHHHHHHHHHhcCCchHHHHHHhhhHHHHHHHHHHHhhhhhhhccccccc--eecccceee
Confidence 457788999999999999999999999999999999999999998887752 23221 111 24775 567999999
Q ss_pred cCCC--C--CCCCCCCCEEEEEeccccCcEEeceeeEEEccCCC-----HHHHHHHHHHHHHHHHHHHhcCCCCcHHHHH
Q 017786 196 HGIP--D--SRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVS-----DGLKRLVKVTEECLEKGIAVCKDGASFKKIG 266 (366)
Q Consensus 196 h~~p--~--~~~l~~GDiv~iD~g~~~~GY~~D~sRT~~vG~~~-----~e~~~l~~~~~ea~~~ai~~~kPG~~~~dI~ 266 (366)
|+.| + +..|++||+|.||+|+++|||.+.++.|++|+.++ ....+++.++..|.+++++.+|||.+-..|-
T Consensus 91 h~sPlksd~~~~Lk~GDvVKIdLG~HiDGfiA~vaHT~VV~~~~~~~vtG~kADvI~AAh~A~eaa~rllkpgn~n~~vT 170 (398)
T KOG2776|consen 91 HFSPLKSDADYTLKEGDVVKIDLGVHIDGFIALVAHTIVVGPAPDTPVTGRKADVIAAAHLAAEAALRLLKPGNTNTQVT 170 (398)
T ss_pred ccCcCCCCCcccccCCCEEEEEeeeeeccceeeeeeeEEeccCCCCcccCchhHHHHHHHHHHHHHHHHhCCCCCCchhh
Confidence 9988 2 57899999999999999999999999999998643 5678999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCccCCceeeccCCcc-ccCCccccCCC------CCCccccCCcEEEEccceecCcccccccCC-----
Q 017786 267 KRISEHAEKYGFGVVERFVGHGVGKVF-HSEPIIYHNRN------ENPGCMVEGQTFTIEPILTMGSIECITWPD----- 334 (366)
Q Consensus 267 ~ai~~~~~~~G~~~~~~~~GHgIG~~~-he~P~i~~~~~------~~~~~l~~GmvftiEP~i~~~~~~~~~~~d----- 334 (366)
++|.+.+.++++..+....-|..=..+ ...+.|..... -+...++++.|++++..+..+......-++
T Consensus 171 ~~i~k~aas~~c~pVegmlshql~~~~idGeKtIi~n~sdqq~~~~e~~~fe~~Evya~Di~~stg~~~~K~~~~~~~t~ 250 (398)
T KOG2776|consen 171 RAIVKTAASYGCKPVEGMLSHQLKQHVIDGEKTIIQNPSDQQKKEHEKTEFEEHEVYAIDILVSTGEGSPKEGDDRAPTI 250 (398)
T ss_pred HHHHHHHHHhCCcccccchhHHHHhhhhcCCceEecCcchhhhccccccccccceeEEEEEEEecCCCccccccccccee
Confidence 999999999999988777777665533 33454443322 234578899999888766654432111110
Q ss_pred ---------------------------------------------------------CCee-eecCCCceEEEEEEEEEe
Q 017786 335 ---------------------------------------------------------NWTT-LTADGNPAAQFEHTILIT 356 (366)
Q Consensus 335 ---------------------------------------------------------~wt~-~t~dg~~~a~~EdtvlVT 356 (366)
.+.+ +.++|+..+||+.|||..
T Consensus 251 y~kd~~~~y~LKlKaSR~~~seI~k~~g~~PF~~rs~~~e~r~rmGl~Ec~~~~ll~p~pVl~~kp~~~vaqfk~Tvllm 330 (398)
T KOG2776|consen 251 YYKDESVSYMLKLKASRALLSEIKKKFGVMPFTLRSLEEEFRARLGLVECTNHGLLVPYPVLYEKPGEFVAQFKFTVLLM 330 (398)
T ss_pred EEeccchHHHHHHHHHHHHHHHHHhhcCcccccccchhhHHHhhhhhHHhccCccccccceeecCCcchhhheeeEEEec
Confidence 0111 146788999999999999
Q ss_pred CCceEeCCC
Q 017786 357 RTGAEILTI 365 (366)
Q Consensus 357 edG~EiLT~ 365 (366)
++|.-.||.
T Consensus 331 Png~~~l~~ 339 (398)
T KOG2776|consen 331 PNGSLRLTG 339 (398)
T ss_pred cCCCccccC
Confidence 999888774
No 38
>COG5406 Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics]
Probab=99.64 E-value=1.8e-15 Score=150.70 Aligned_cols=243 Identities=17% Similarity=0.186 Sum_probs=177.9
Q ss_pred CCccCCCCCCCCccccCCCHHHHHHHHHHHHHHHHHHHHHhHhc---cCC---ccHHHHHHHHHHHHHHh----------
Q 017786 107 PYVSSTSLPDLSPEYQIHDSESIAKMRAACELAARVLDAAGKLV---RPS---VTTNEIDKAVHQMIIEA---------- 170 (366)
Q Consensus 107 ~y~~~~~~~~l~~~R~iKs~~EI~~~R~A~~ia~~~l~~~~~~i---~pG---vTe~ei~~~~~~~~~~~---------- 170 (366)
.|...|++.-+..+-.+|+++||+.+|.+++.....|.+..+.+ -.| +|..-+...+...+-+-
T Consensus 154 efN~~DvslgLsk~~~~KD~~E~an~~~ss~~s~~~M~~~~~em~~~~D~~~kit~~KlsD~mes~iddv~f~q~~s~~l 233 (1001)
T COG5406 154 EFNASDVSLGLSKMFLTKDAEEIANCRASSAASSVLMRYFVKEMEMLWDGAFKITHGKLSDLMESLIDDVEFFQTKSLKL 233 (1001)
T ss_pred hcchhhhhhhhhHHhccccHHHHhhccccchHHHHHHHHHHHHHHHHHhhhhhhccchHHHHhhhhcchhhhhhhcCccc
Confidence 44445666667778899999999999999999999988554432 122 33333433333322211
Q ss_pred CCCC-CCCCCCCCCCeeeecCCC-CcccCCCCCCCCCCCCEEEEEeccccCcEEeceeeEEEccCCCHHHHHHHHHHHHH
Q 017786 171 GAYP-SPLGYGGFPKSVCTSVNE-CMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDTSKTFLCGNVSDGLKRLVKVTEEC 248 (366)
Q Consensus 171 G~~p-s~~~~~~fp~~v~~g~n~-~~~h~~p~~~~l~~GDiv~iD~g~~~~GY~~D~sRT~~vG~~~~e~~~l~~~~~ea 248 (366)
|-.. ..+.+ .|.+++.+|..- ..+.....+..+ .||+|...+|.+|+|||+.++||+++ +|+.++++-|+.++.+
T Consensus 234 ~~~~~d~lew-~ytpiiqsg~~~Dl~psa~s~~~~l-~gd~vl~s~GiRYn~YCSn~~RT~l~-dp~~e~~~Ny~fl~~l 310 (1001)
T COG5406 234 GDIDLDQLEW-CYTPIIQSGGSIDLTPSAFSFPMEL-TGDVVLLSIGIRYNGYCSNMSRTILT-DPDSEQQKNYEFLYML 310 (1001)
T ss_pred cccchhhhhh-hcchhhccCceeecccccccCchhh-cCceEEEEeeeeeccccccccceEEe-CCchHhhhhHHHHHHH
Confidence 1100 01111 255666666432 223333344555 48999999999999999999999999 6899999999999999
Q ss_pred HHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCccCCc---eeeccCCccccCCccccCCCCCCccccCCcEEEEccceecC
Q 017786 249 LEKGIAVCKDGASFKKIGKRISEHAEKYGFGVVERF---VGHGVGKVFHSEPIIYHNRNENPGCMVEGQTFTIEPILTMG 325 (366)
Q Consensus 249 ~~~ai~~~kPG~~~~dI~~ai~~~~~~~G~~~~~~~---~GHgIG~~~he~P~i~~~~~~~~~~l~~GmvftiEP~i~~~ 325 (366)
++..+..||||...++||..+.+++++.|....+.| +|-+||+++.+...+.... .+++|+.||+|.|.-++..-
T Consensus 311 Qk~i~~~~rpG~~~g~iY~~~~~yi~~~~pel~pnF~~nvG~~igiefR~s~~~~nvk--n~r~lq~g~~fnis~gf~nl 388 (1001)
T COG5406 311 QKYILGLVRPGTDSGIIYSEAEKYISSNGPELGPNFIYNVGLMIGIEFRSSQKPFNVK--NGRVLQAGCIFNISLGFGNL 388 (1001)
T ss_pred HHHHHhhcCCCCCchhHHHHHHHHHHhcCCccCchHhhhhhhhccccccccccceecc--CCceeccccEEEEeeccccc
Confidence 999999999999999999999999999999887777 7999999998877766543 45899999999998766431
Q ss_pred cccccccCCCCeeeecCCCceEEEEEEEEEeCCceEeCCC
Q 017786 326 SIECITWPDNWTTLTADGNPAAQFEHTILITRTGAEILTI 365 (366)
Q Consensus 326 ~~~~~~~~d~wt~~t~dg~~~a~~EdtvlVTedG~EiLT~ 365 (366)
.+.- ....+.+++-||+-|+-+-+.++|+
T Consensus 389 -------~~~~----~~Nnyal~l~dt~qi~ls~p~~~t~ 417 (1001)
T COG5406 389 -------INPH----PKNNYALLLIDTEQISLSNPIVFTD 417 (1001)
T ss_pred -------CCCC----cccchhhhhccceEeecCCceeccc
Confidence 1111 1245788899999999888888885
No 39
>cd01086 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=97.45 E-value=0.0015 Score=60.31 Aligned_cols=103 Identities=14% Similarity=0.230 Sum_probs=72.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCccC-CceeeccCCccccCCccccCCCCCCccccCCc
Q 017786 236 DGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGVVE-RFVGHGVGKVFHSEPIIYHNRNENPGCMVEGQ 314 (366)
Q Consensus 236 ~e~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~ai~~~~~~~G~~~~~-~~~GHgIG~~~he~P~i~~~~~~~~~~l~~Gm 314 (366)
+.+|++.+.+.++++++++.++||++-.||..++.+.+.++|..... .+.++...........+.|+. ..+.+|++|+
T Consensus 2 ~~lr~A~~i~~~~~~~~~~~~~pG~tE~ev~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~h~~-~~~~~l~~Gd 80 (238)
T cd01086 2 EGMREAGRIVAEVLDELAKAIKPGVTTKELDQIAHEFIEEHGAYPAPLGYYGFPKSICTSVNEVVCHGI-PDDRVLKDGD 80 (238)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCcccccCCCCCcceecCCCCceeCCC-CCCcccCCCC
Confidence 45789999999999999999999999999999999999999975311 000110000000011223322 2467899999
Q ss_pred EEEEccceecCcccccccCCCCeeeecCCCceEEEEEEEEEeC
Q 017786 315 TFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHTILITR 357 (366)
Q Consensus 315 vftiEP~i~~~~~~~~~~~d~wt~~t~dg~~~a~~EdtvlVTe 357 (366)
++.++.+... +++.+.+..|+.|.+
T Consensus 81 ~v~id~g~~~------------------~GY~ad~~RT~~~G~ 105 (238)
T cd01086 81 IVNIDVGVEL------------------DGYHGDSARTFIVGE 105 (238)
T ss_pred EEEEEEEEEE------------------CCEEEEEEEEEECCC
Confidence 9999988754 235678999999875
No 40
>PLN03158 methionine aminopeptidase; Provisional
Probab=97.42 E-value=0.0012 Score=65.93 Aligned_cols=115 Identities=10% Similarity=0.146 Sum_probs=81.7
Q ss_pred cEEeceeeEEEccCCC--HHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCc-cCCceee----ccCCc
Q 017786 220 GYHGDTSKTFLCGNVS--DGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGV-VERFVGH----GVGKV 292 (366)
Q Consensus 220 GY~~D~sRT~~vG~~~--~e~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~ai~~~~~~~G~~~-~~~~~GH----gIG~~ 292 (366)
..+.++.++..|..+. +.+|++.+.+.++++++++.+|||++-.||..++++.+.++|... ...+.+. ..|.
T Consensus 126 ~~~~~~~~~~~IKsp~EIe~mR~A~~ia~~al~~a~~~irpGvTe~EI~~~v~~~~~~~Ga~ps~l~y~~fp~svcts~- 204 (396)
T PLN03158 126 EPNSDLQHSVEIKTPEQIQRMRETCRIAREVLDAAARAIKPGVTTDEIDRVVHEATIAAGGYPSPLNYHFFPKSCCTSV- 204 (396)
T ss_pred ccccccccceeeCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCccccccccCCCceeeecc-
Confidence 3456777888886655 467889999999999999999999999999999999988876432 1111111 1121
Q ss_pred cccCCccccCCCCCCccccCCcEEEEccceecCcccccccCCCCeeeecCCCceEEEEEEEEEeC
Q 017786 293 FHSEPIIYHNRNENPGCMVEGQTFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHTILITR 357 (366)
Q Consensus 293 ~he~P~i~~~~~~~~~~l~~GmvftiEP~i~~~~~~~~~~~d~wt~~t~dg~~~a~~EdtvlVTe 357 (366)
...+.|+. .++++|++|+++.|+.+.+. .++.+-+..|++|++
T Consensus 205 ---N~~i~Hgi-p~~r~L~~GDiV~iDvg~~~------------------~GY~aD~tRT~~VG~ 247 (396)
T PLN03158 205 ---NEVICHGI-PDARKLEDGDIVNVDVTVYY------------------KGCHGDLNETFFVGN 247 (396)
T ss_pred ---cccccCCC-CCCccCCCCCEEEEEEeEEE------------------CCEEEeEEeEEEcCC
Confidence 12244432 24678999999999998865 235567889999864
No 41
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate specificity compared to other metallo-aminopeptidases, suggesting they play roles in regulation of biological processes rather than general protein degradation.
Probab=97.28 E-value=0.0035 Score=55.67 Aligned_cols=102 Identities=24% Similarity=0.277 Sum_probs=73.5
Q ss_pred HHHHHHHHHHHHHHHHHhHhccCCccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCeeeecCCCCcccCCCCCCCCCCCCE
Q 017786 130 AKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDI 209 (366)
Q Consensus 130 ~~~R~A~~ia~~~l~~~~~~i~pGvTe~ei~~~~~~~~~~~G~~ps~~~~~~fp~~v~~g~n~~~~h~~p~~~~l~~GDi 209 (366)
+.+|++.+.+.++++.+.+.++||++..||...+++.+.++|.........++ .+.....+...-....+.+|++|.+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~i~pG~~~~ei~~~~~~~~~~~g~~~~~~~~~Gh--~iG~~~~e~~~~~~~~~~~l~~gmv 179 (207)
T cd01066 102 DEQRELYEAVREAQEAALAALRPGVTAEEVDAAAREVLEEHGLGPNFGHRTGH--GIGLEIHEPPVLKAGDDTVLEPGMV 179 (207)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCccccCCCCCcc--ccCcccCCCCCcCCCCCCCcCCCCE
Confidence 57888999999999999999999999999999999999999874211111111 1111111111101124678999999
Q ss_pred EEEEeccccC-cEEeceeeEEEccC
Q 017786 210 INIDVTVYLN-GYHGDTSKTFLCGN 233 (366)
Q Consensus 210 v~iD~g~~~~-GY~~D~sRT~~vG~ 233 (366)
+.|+.+.... ++..-+..|++|.+
T Consensus 180 ~~iep~~~~~~~~g~~~ed~v~vt~ 204 (207)
T cd01066 180 FAVEPGLYLPGGGGVRIEDTVLVTE 204 (207)
T ss_pred EEECCEEEECCCcEEEeeeEEEEeC
Confidence 9999998876 58888999998854
No 42
>cd01088 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=97.00 E-value=0.0064 Score=58.25 Aligned_cols=97 Identities=11% Similarity=0.137 Sum_probs=69.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCccCCceeeccCCccccCCccccCCC--CCCccccCC
Q 017786 236 DGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGVVERFVGHGVGKVFHSEPIIYHNRN--ENPGCMVEG 313 (366)
Q Consensus 236 ~e~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~ai~~~~~~~G~~~~~~~~GHgIG~~~he~P~i~~~~~--~~~~~l~~G 313 (366)
+.++++.+.+.++++++++.++||++..||.+.+++.+.+.|... . +.++.... ....|+.+ +++.+|++|
T Consensus 2 ~~~r~Aa~I~~~a~~~~~~~i~pG~te~ei~~~~~~~i~~~G~~~--a---fp~~is~n--~~~~H~~p~~~d~~~l~~G 74 (291)
T cd01088 2 EKYREAGEIHRQVRKYAQSLIKPGMTLLEIAEFVENRIRELGAGP--A---FPVNLSIN--ECAAHYTPNAGDDTVLKEG 74 (291)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCC--C---CCceeccC--CEeeCCCCCCCCCcccCCC
Confidence 357889999999999999999999999999999999999998541 1 22222221 22334432 345789999
Q ss_pred cEEEEccceecCcccccccCCCCeeeecCCCceEEEEEEEEEeC
Q 017786 314 QTFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHTILITR 357 (366)
Q Consensus 314 mvftiEP~i~~~~~~~~~~~d~wt~~t~dg~~~a~~EdtvlVTe 357 (366)
+++.|+.+... .++.+-...|+.+.+
T Consensus 75 DvV~iD~G~~~------------------dGY~sD~arT~~vg~ 100 (291)
T cd01088 75 DVVKLDFGAHV------------------DGYIADSAFTVDFDP 100 (291)
T ss_pred CEEEEEEEEEE------------------CCEEEEEEEEEecCh
Confidence 99999988754 124556667776653
No 43
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P. The members of this subfamily presumably catalyse hydrolysis of Xaa-Pro dipeptides and/or release of any N-terminal amino acid, including proline, that is linked with proline.
Probab=96.98 E-value=0.0079 Score=54.00 Aligned_cols=99 Identities=24% Similarity=0.295 Sum_probs=68.7
Q ss_pred HHHHHHHHHHHHHHHHHhHhccCCccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCeeeecCCC-CcccCCC-CCCCCCCC
Q 017786 130 AKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNE-CMCHGIP-DSRQLQDG 207 (366)
Q Consensus 130 ~~~R~A~~ia~~~l~~~~~~i~pGvTe~ei~~~~~~~~~~~G~~ps~~~~~~fp~~v~~g~n~-~~~h~~p-~~~~l~~G 207 (366)
+.+|++.+.+.++++.+.+.++||++-.||.+.+++.+.++|..+......|+ .+|... ..+.-.+ ++++|++|
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~pG~~~~di~~~~~~~~~~~g~~~~~~~~~Gh----~iG~~~~e~p~i~~~~~~~l~~g 178 (208)
T cd01092 103 DELKEIYEIVLEAQQAAIKAVKPGVTAKEVDKAARDVIEEAGYGEYFIHRTGH----GVGLEVHEAPYISPGSDDVLEEG 178 (208)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCccccCCCCCcc----ccCcccCcCCCcCCCCCCCcCCC
Confidence 46678889999999999999999999999999999999999974321111111 122110 0011112 46889999
Q ss_pred CEEEEEeccccCcE-EeceeeEEEcc
Q 017786 208 DIINIDVTVYLNGY-HGDTSKTFLCG 232 (366)
Q Consensus 208 Div~iD~g~~~~GY-~~D~sRT~~vG 232 (366)
.++.|+.+.+..|+ ..-+..|++|.
T Consensus 179 mv~~iep~~~~~~~~g~~~ed~v~vt 204 (208)
T cd01092 179 MVFTIEPGIYIPGKGGVRIEDDVLVT 204 (208)
T ss_pred CEEEECCeEEecCCCEEEeeeEEEEC
Confidence 99999988776443 44467788774
No 44
>PRK05716 methionine aminopeptidase; Validated
Probab=96.93 E-value=0.0088 Score=55.70 Aligned_cols=100 Identities=17% Similarity=0.241 Sum_probs=69.6
Q ss_pred HHHHHHHHHHHHHHHHhHhccCCccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCeeeecCCC--CcccC-C-CCCCCCCC
Q 017786 131 KMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNE--CMCHG-I-PDSRQLQD 206 (366)
Q Consensus 131 ~~R~A~~ia~~~l~~~~~~i~pGvTe~ei~~~~~~~~~~~G~~ps~~~~~~fp~~v~~g~n~--~~~h~-~-p~~~~l~~ 206 (366)
..|++.+.+.++++++.+.++||++-.||.+++++.+.+.|..+. ..+.++. +.....+ .+.++ . .++.+|++
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~pG~~~~dv~~~~~~~~~~~g~~~~-~~~~GHg--iG~~~~e~p~~~~~~~~~~~~~le~ 195 (252)
T PRK05716 119 EDKRLCEVTKEALYLGIAAVKPGARLGDIGHAIQKYAEAEGFSVV-REYCGHG--IGRKFHEEPQIPHYGAPGDGPVLKE 195 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCeee-cCccccc--cCCccCCCCccCcCCCCCCCCEecC
Confidence 456778888899999999999999999999999999999987652 1222221 1111111 11111 1 24678999
Q ss_pred CCEEEEEecccc------------------CcEEeceeeEEEccC
Q 017786 207 GDIINIDVTVYL------------------NGYHGDTSKTFLCGN 233 (366)
Q Consensus 207 GDiv~iD~g~~~------------------~GY~~D~sRT~~vG~ 233 (366)
|.++.|+.+.+. +++..-+..|++|.+
T Consensus 196 Gmv~~vEp~i~~~~~~~~~~~~~~~~~~~~g~~g~~~ed~v~Vt~ 240 (252)
T PRK05716 196 GMVFTIEPMINAGKREVKTLKDGWTVVTKDGSLSAQYEHTVAVTE 240 (252)
T ss_pred CCEEEEccEEEcCCCceEEcCCCCEEEccCCCcEEeeeeEEEEcC
Confidence 999999987654 346667788888854
No 45
>PRK12896 methionine aminopeptidase; Reviewed
Probab=96.90 E-value=0.008 Score=56.09 Aligned_cols=110 Identities=10% Similarity=0.152 Sum_probs=74.3
Q ss_pred eeeEEEccCCCH--HHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCccCC-ceee----ccCCccccCC
Q 017786 225 TSKTFLCGNVSD--GLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGVVER-FVGH----GVGKVFHSEP 297 (366)
Q Consensus 225 ~sRT~~vG~~~~--e~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~ai~~~~~~~G~~~~~~-~~GH----gIG~~~he~P 297 (366)
-.|++.+-.+.+ .+|++.+.+.++++++++.++||++-.||...+.+.+.+.|...... ..++ ..|.. .
T Consensus 4 ~~~~~~vKs~~Ei~~~r~a~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~n----~ 79 (255)
T PRK12896 4 EGRGMEIKSPRELEKMRKIGRIVATALKEMGKAVEPGMTTKELDRIAEKRLEEHGAIPSPEGYYGFPGSTCISVN----E 79 (255)
T ss_pred cCCceeECCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHCCCEeCcccCCCCCcceEecCC----C
Confidence 357777744333 45788888889999999999999999999999999999998753111 1111 11211 1
Q ss_pred ccccCCCCCCccccCCcEEEEccceecCcccccccCCCCeeeecCCCceEEEEEEEEEeC
Q 017786 298 IIYHNRNENPGCMVEGQTFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHTILITR 357 (366)
Q Consensus 298 ~i~~~~~~~~~~l~~GmvftiEP~i~~~~~~~~~~~d~wt~~t~dg~~~a~~EdtvlVTe 357 (366)
.+.|+. ..+.+|++|+++.++.+... +++.+-+.-|+.+.+
T Consensus 80 ~~~h~~-p~~~~l~~Gd~v~iD~g~~~------------------~gY~aD~~RT~~vG~ 120 (255)
T PRK12896 80 EVAHGI-PGPRVIKDGDLVNIDVSAYL------------------DGYHGDTGITFAVGP 120 (255)
T ss_pred eeEecC-CCCccCCCCCEEEEEEeEEE------------------CcEEEeeEEEEECCC
Confidence 123332 24478999999999988754 235566777877753
No 46
>TIGR00500 met_pdase_I methionine aminopeptidase, type I. Methionine aminopeptidase is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. This model describes type I. The role of this protein in general is to produce the mature form of cytosolic proteins by removing the N-terminal methionine.
Probab=96.82 E-value=0.015 Score=54.07 Aligned_cols=100 Identities=16% Similarity=0.151 Sum_probs=69.2
Q ss_pred HHHHHHHHHHHHHHHHhHhccCCccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCeeeecCCCC--cccCC--CCCCCCCC
Q 017786 131 KMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNEC--MCHGI--PDSRQLQD 206 (366)
Q Consensus 131 ~~R~A~~ia~~~l~~~~~~i~pGvTe~ei~~~~~~~~~~~G~~ps~~~~~~fp~~v~~g~n~~--~~h~~--p~~~~l~~ 206 (366)
..|++.+++.++++++.+.++||++-.||...+++.+.+.|..+. ..+.|+ .+.....+. ++.+. .++.+|++
T Consensus 117 ~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~~g~~~~-~~~~GH--giG~~~~e~p~i~~~~~~~~~~~l~~ 193 (247)
T TIGR00500 117 EAEKLLECTEESLYKAIEEAKPGNRIGEIGAAIQKYAEAKGFSVV-REYCGH--GIGRKFHEEPQIPNYGKKFTNVRLKE 193 (247)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCEec-cCccCC--ccCcccCCCCccCCcCcCCCCCEecC
Confidence 356777888899999999999999999999999999999987652 122222 122221111 11111 23678999
Q ss_pred CCEEEEEecccc------------------CcEEeceeeEEEccC
Q 017786 207 GDIINIDVTVYL------------------NGYHGDTSKTFLCGN 233 (366)
Q Consensus 207 GDiv~iD~g~~~------------------~GY~~D~sRT~~vG~ 233 (366)
|.++.|+-+.+. +++..-+..|++|.+
T Consensus 194 gmv~~iEp~i~~~~~~~~~~~~~~~~~~~~~~~g~ried~v~Vt~ 238 (247)
T TIGR00500 194 GMVFTIEPMVNTGTEEITTAADGWTVKTKDGSLSAQFEHTIVITD 238 (247)
T ss_pred CCEEEEeeEEEcCCCcEEECCCCCEEEccCCCeEEEEeEEEEEcC
Confidence 999999987664 245666778888843
No 47
>PRK15173 peptidase; Provisional
Probab=96.71 E-value=0.016 Score=56.30 Aligned_cols=103 Identities=13% Similarity=0.109 Sum_probs=69.6
Q ss_pred HHHHHHHHHHHHHHHHHhHhccCCccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCeeeecCCCCcccCC-CCCCCCCCCC
Q 017786 130 AKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGI-PDSRQLQDGD 208 (366)
Q Consensus 130 ~~~R~A~~ia~~~l~~~~~~i~pGvTe~ei~~~~~~~~~~~G~~ps~~~~~~fp~~v~~g~n~~~~h~~-p~~~~l~~GD 208 (366)
+..|+..+++.++++++.+.++||++-.||...+.+.+.+.|.......+.++...+..+..+. +... .++.+|++|.
T Consensus 202 ~~~~~~y~~v~ea~~~~~~~irPG~~~~dv~~a~~~~~~~~G~~~~~~~~~GHGiG~~lg~~E~-P~i~~~~~~~Le~GM 280 (323)
T PRK15173 202 EITRKIYQTIRTGHEHMLSMVAPGVKMKDVFDSTMEVIKKSGLPNYNRGHLGHGNGVFLGLEES-PFVSTHATESFTSGM 280 (323)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccccCCCCCCcCCCCCCcCCC-CCCCCCCCCccCCCC
Confidence 3457788899999999999999999999999999999999886432111111111111122221 1111 2457899999
Q ss_pred EEEEEeccccCc-EEeceeeEEEccC
Q 017786 209 IINIDVTVYLNG-YHGDTSKTFLCGN 233 (366)
Q Consensus 209 iv~iD~g~~~~G-Y~~D~sRT~~vG~ 233 (366)
++.|+.+.+..| +..-+..|++|.+
T Consensus 281 V~tiEPgiy~~g~ggvriEDtvlVTe 306 (323)
T PRK15173 281 VLSLETPYYGYNLGSIMIEDMILINK 306 (323)
T ss_pred EEEECCEEEcCCCcEEEEeeEEEEcC
Confidence 999999876433 3356788998843
No 48
>KOG2738 consensus Putative methionine aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=96.68 E-value=0.0093 Score=56.23 Aligned_cols=87 Identities=14% Similarity=0.307 Sum_probs=59.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCc-cCCceee--ccCCccccCCccccCCCCCCccccC
Q 017786 236 DGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGV-VERFVGH--GVGKVFHSEPIIYHNRNENPGCMVE 312 (366)
Q Consensus 236 ~e~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~ai~~~~~~~G~~~-~~~~~GH--gIG~~~he~P~i~~~~~~~~~~l~~ 312 (366)
+.+|++.+.++++++.|..++|||++-.||.+++.+.+-++|.-+ ..++.|. ++-..+ .-.|-|. -.+.++|+.
T Consensus 123 e~mR~ac~LarevLd~Aa~~v~PgvTTdEiD~~VH~a~Ierg~YPSPLnYy~FPKS~CTSV--NEviCHG-IPD~RpLed 199 (369)
T KOG2738|consen 123 EGMRKACRLAREVLDYAATLVRPGVTTDEIDRAVHNAIIERGAYPSPLNYYGFPKSVCTSV--NEVICHG-IPDSRPLED 199 (369)
T ss_pred HHHHHHHHHHHHHHHHHhhhcCCCccHHHHHHHHHHHHHhcCCcCCCcccCCCchhhhcch--hheeecC-CCCcCcCCC
Confidence 346778888999999999999999999999999999888776532 1111110 011111 1112221 136679999
Q ss_pred CcEEEEccceecC
Q 017786 313 GQTFTIEPILTMG 325 (366)
Q Consensus 313 GmvftiEP~i~~~ 325 (366)
|.++.|+..+|..
T Consensus 200 GDIvNiDVtvY~~ 212 (369)
T KOG2738|consen 200 GDIVNIDVTVYLN 212 (369)
T ss_pred CCEEeEEEEEEec
Confidence 9999999999873
No 49
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis]
Probab=96.62 E-value=0.019 Score=53.70 Aligned_cols=86 Identities=13% Similarity=0.171 Sum_probs=60.6
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCc-cCCcee--eccCCccccCCccccCCCCCCccccCC
Q 017786 237 GLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGV-VERFVG--HGVGKVFHSEPIIYHNRNENPGCMVEG 313 (366)
Q Consensus 237 e~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~ai~~~~~~~G~~~-~~~~~G--HgIG~~~he~P~i~~~~~~~~~~l~~G 313 (366)
.+|++-+.+.++++.+.+.++||++..||.+.++++++++|... ..++-| -.+...+ .-.+.|+-++++.+|++|
T Consensus 13 k~r~Ag~i~a~~l~~~~~~v~pGvtt~Eld~~~~~~i~~~ga~pa~~gy~g~~~~~ciSv--Ne~v~HgiP~d~~vlk~G 90 (255)
T COG0024 13 KMREAGKIAAKALKEVASLVKPGVTTLELDEIAEEFIREKGAYPAFLGYKGFPFPTCISV--NEVVAHGIPGDKKVLKEG 90 (255)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHcCceehhccCcCCCcceEeeh--hheeeecCCCCCcccCCC
Confidence 45677778888999999999999999999999999999866532 111111 1122211 122344433467899999
Q ss_pred cEEEEccceec
Q 017786 314 QTFTIEPILTM 324 (366)
Q Consensus 314 mvftiEP~i~~ 324 (366)
.++.|..++..
T Consensus 91 Div~IDvg~~~ 101 (255)
T COG0024 91 DIVKIDVGAHI 101 (255)
T ss_pred CEEEEEEEEEE
Confidence 99999998865
No 50
>PRK08671 methionine aminopeptidase; Provisional
Probab=96.60 E-value=0.031 Score=53.56 Aligned_cols=95 Identities=22% Similarity=0.264 Sum_probs=70.0
Q ss_pred HHHHHHHHHHHHHHHHhHhccCCccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCeeeecCCCCcccCC--------CCCC
Q 017786 131 KMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGI--------PDSR 202 (366)
Q Consensus 131 ~~R~A~~ia~~~l~~~~~~i~pGvTe~ei~~~~~~~~~~~G~~ps~~~~~~fp~~v~~g~n~~~~h~~--------p~~~ 202 (366)
..++..+.+.++++.+.+.++||++-.||.+.+++.+.+.|..+. .+..|+. .|.+ ..|.. .++.
T Consensus 102 ~~~~l~~a~~~a~~aai~~ikpG~~~~dv~~~i~~vi~~~G~~~~-~~~~GHg----iG~~--~~he~p~ip~~~~~~~~ 174 (291)
T PRK08671 102 KYEDLVEASEEALEAAIEVVRPGVSVGEIGRVIEETIRSYGFKPI-RNLTGHG----LERY--ELHAGPSIPNYDEGGGV 174 (291)
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCccc-CCCcccC----cCCC--cccCCCccCccCCCCCc
Confidence 456788888999999999999999999999999999999997762 2222221 2211 12321 2357
Q ss_pred CCCCCCEEEEEeccc-cCcEEeceeeEEEcc
Q 017786 203 QLQDGDIINIDVTVY-LNGYHGDTSKTFLCG 232 (366)
Q Consensus 203 ~l~~GDiv~iD~g~~-~~GY~~D~sRT~~vG 232 (366)
+|++|+++.|+..+. -.|+..|-.+|-+..
T Consensus 175 ~le~GmV~aIEp~~t~G~G~v~~~~~~~iy~ 205 (291)
T PRK08671 175 KLEEGDVYAIEPFATDGEGKVVEGPEVEIYS 205 (291)
T ss_pred eeCCCCEEEEcceEECCCCeEecCCceEEEe
Confidence 899999999998754 467888888777664
No 51
>PRK14575 putative peptidase; Provisional
Probab=96.57 E-value=0.021 Score=57.25 Aligned_cols=101 Identities=11% Similarity=0.097 Sum_probs=69.3
Q ss_pred HHHHHHHHHHHHHHHHhHhccCCccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCeee--ecCCCCcccCCCCCCCCCCCC
Q 017786 131 KMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVC--TSVNECMCHGIPDSRQLQDGD 208 (366)
Q Consensus 131 ~~R~A~~ia~~~l~~~~~~i~pGvTe~ei~~~~~~~~~~~G~~ps~~~~~~fp~~v~--~g~n~~~~h~~p~~~~l~~GD 208 (366)
..|++.+++.++++++.+.+|||++-.||++.+.+.+.+.|....+..+ +...+. .|..+.-.-..-++.+|++|.
T Consensus 286 ~~~~~~~~~~~a~~~~~~~~rpG~~~~dv~~a~~~~~~~~G~~~~~~~~--~GHGiG~~lg~~e~P~i~~~~~~~Le~GM 363 (406)
T PRK14575 286 ITRKIYQTIRTGHEHMLSMVAPGVKMKDVFDSTMEVIKKSGLPNYNRGH--LGHGNGVFLGLEESPFVSTHATESFTSGM 363 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccccCCC--CCCcccCCCCCccCCCCCCCCCCCcCCCC
Confidence 4567788889999999999999999999999999999998864322111 111121 122211000012457899999
Q ss_pred EEEEEeccccCc-EEeceeeEEEccC
Q 017786 209 IINIDVTVYLNG-YHGDTSKTFLCGN 233 (366)
Q Consensus 209 iv~iD~g~~~~G-Y~~D~sRT~~vG~ 233 (366)
++.|+.+.+..| +..-+..|++|.+
T Consensus 364 v~tiEpgiy~~g~gGvriEDtvlVT~ 389 (406)
T PRK14575 364 VLSLETPYYGYNLGSIMIEDMILINK 389 (406)
T ss_pred EEEECCeeecCCCcEEEEEeEEEEcC
Confidence 999998887544 3456889999854
No 52
>PRK12897 methionine aminopeptidase; Reviewed
Probab=96.56 E-value=0.018 Score=53.64 Aligned_cols=100 Identities=16% Similarity=0.211 Sum_probs=68.6
Q ss_pred HHHHHHHHHHHHHHHHhHhccCCccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCeeeecCCC--CcccCC-C-CCCCCCC
Q 017786 131 KMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNE--CMCHGI-P-DSRQLQD 206 (366)
Q Consensus 131 ~~R~A~~ia~~~l~~~~~~i~pGvTe~ei~~~~~~~~~~~G~~ps~~~~~~fp~~v~~g~n~--~~~h~~-p-~~~~l~~ 206 (366)
..|++.+++.++++.+.+.++||++..|++.++++.+.+.|.... .++.|+ .+.....+ .+.++. + +..+|++
T Consensus 118 ~~~~~~~~~~~a~~~~i~~~kpG~~~~dv~~a~~~~~~~~g~~~~-~~~~GH--giGl~~hE~P~i~~~~~~~~~~~l~~ 194 (248)
T PRK12897 118 EAEKLLLVAENALYKGIDQAVIGNRVGDIGYAIESYVANEGFSVA-RDFTGH--GIGKEIHEEPAIFHFGKQGQGPELQE 194 (248)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHcCCccC-CCeEEC--ccCCcccCCCccCCCCCCCCCCCcCC
Confidence 356677888999999999999999999999999999999986432 122221 11111111 112211 2 3467999
Q ss_pred CCEEEEEeccc-----------------cCc-EEeceeeEEEccC
Q 017786 207 GDIINIDVTVY-----------------LNG-YHGDTSKTFLCGN 233 (366)
Q Consensus 207 GDiv~iD~g~~-----------------~~G-Y~~D~sRT~~vG~ 233 (366)
|.++.+.-+.+ .+| +..-+..|++|.+
T Consensus 195 Gmv~tiEP~~~~~~~~~~~~~~~~~~~~~~g~~g~r~edtv~Vt~ 239 (248)
T PRK12897 195 GMVITIEPIVNVGMRYSKVDLNGWTARTMDGKLSAQYEHTIAITK 239 (248)
T ss_pred CCEEEECCeEecCCCceEECCCCcEEEcCCCCeEeecceEEEEeC
Confidence 99999998876 244 6677888888854
No 53
>PRK14576 putative endopeptidase; Provisional
Probab=96.52 E-value=0.026 Score=56.61 Aligned_cols=102 Identities=13% Similarity=0.084 Sum_probs=69.0
Q ss_pred HHHHHHHHHHHHHHHHhHhccCCccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCeeeecCCCCcccCCC-CCCCCCCCCE
Q 017786 131 KMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIP-DSRQLQDGDI 209 (366)
Q Consensus 131 ~~R~A~~ia~~~l~~~~~~i~pGvTe~ei~~~~~~~~~~~G~~ps~~~~~~fp~~v~~g~n~~~~h~~p-~~~~l~~GDi 209 (366)
..|++.+++.++++++++++|||++-.||+.++.+.+.+.|...-...+.|+......+..+. +.-.+ ++.+|++|.+
T Consensus 285 ~~~~~~~~~~~a~~a~~~~~rPG~~~~dv~~a~~~~~~~~G~~~~~~~~~GHgiG~~l~~~e~-P~i~~~~~~~Le~GMv 363 (405)
T PRK14576 285 LTQQIYDTIRTGHEHMLSMVAPGVKLKAVFDSTMAVIKTSGLPHYNRGHLGHGDGVFLGLEEV-PFVSTQATETFCPGMV 363 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccccCCCCCCCCCCCCCcCcC-CCcCCCCCCccCCCCE
Confidence 466788888999999999999999999999999999999986432212111111111222221 22122 4678999999
Q ss_pred EEEEeccccCc-EEeceeeEEEccC
Q 017786 210 INIDVTVYLNG-YHGDTSKTFLCGN 233 (366)
Q Consensus 210 v~iD~g~~~~G-Y~~D~sRT~~vG~ 233 (366)
+.++.+.+..| ...-+..|++|.+
T Consensus 364 ~~vEp~~y~~g~ggvriEDtvlVTe 388 (405)
T PRK14576 364 LSLETPYYGIGVGSIMLEDMILITD 388 (405)
T ss_pred EEECCceeecCCCEEEEeeEEEECC
Confidence 99997665443 3344778898843
No 54
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor.
Probab=96.48 E-value=0.031 Score=52.11 Aligned_cols=100 Identities=16% Similarity=0.215 Sum_probs=70.0
Q ss_pred HHHHHHHHHHHHHHHHHhHhccCCccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCe----eeecCCCCcccCCC-CCCCC
Q 017786 130 AKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKS----VCTSVNECMCHGIP-DSRQL 204 (366)
Q Consensus 130 ~~~R~A~~ia~~~l~~~~~~i~pGvTe~ei~~~~~~~~~~~G~~ps~~~~~~fp~~----v~~g~n~~~~h~~p-~~~~l 204 (366)
+..|++.+++.++.+++.+.++||++-.||...+.+.+.+.+..-.. .|++. +.....+....-.+ ++++|
T Consensus 119 ~~~~~~y~~~~~a~~~~i~~lkpG~~~~dv~~~a~~~i~~~~~~~~~----~~~~~~GHgiGle~hE~~~~l~~~~~~~L 194 (243)
T cd01091 119 SEQQKNYNFLLALQEEILKELKPGAKLSDVYQKTLDYIKKKKPELEP----NFTKNLGFGIGLEFRESSLIINAKNDRKL 194 (243)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHhChhHHH----hCcCCcccccCcccccCccccCCCCCCCc
Confidence 35677888999999999999999999999999999999887521100 12222 22222221111112 45789
Q ss_pred CCCCEEEEEeccc-c----------CcEEeceeeEEEccC
Q 017786 205 QDGDIINIDVTVY-L----------NGYHGDTSKTFLCGN 233 (366)
Q Consensus 205 ~~GDiv~iD~g~~-~----------~GY~~D~sRT~~vG~ 233 (366)
++|.++.|..|.+ + ..|-.-++-|++|.+
T Consensus 195 ~~GMvf~vepGi~~~~~~~~~~~~~~~~gv~ieDtV~Vt~ 234 (243)
T cd01091 195 KKGMVFNLSIGFSNLQNPEPKDKESKTYALLLSDTILVTE 234 (243)
T ss_pred CCCCEEEEeCCcccccCccccCccCCeeEEEEEEEEEEcC
Confidence 9999999999986 3 257888999999954
No 55
>TIGR02993 ectoine_eutD ectoine utilization protein EutD. Members of this family are putative peptidases or hydrolases similar to Xaa-Pro aminopeptidase (pfam00557). They belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. The exact function is unknown.
Probab=96.40 E-value=0.026 Score=56.37 Aligned_cols=97 Identities=14% Similarity=0.225 Sum_probs=71.2
Q ss_pred HHHHHHHHHHHHHHHHhHhccCCccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCeeeecCCC--C----cccCCC-CCCC
Q 017786 131 KMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNE--C----MCHGIP-DSRQ 203 (366)
Q Consensus 131 ~~R~A~~ia~~~l~~~~~~i~pGvTe~ei~~~~~~~~~~~G~~ps~~~~~~fp~~v~~g~n~--~----~~h~~p-~~~~ 203 (366)
.+|++.+++.++++++.++++||+|-.||++++.+.+.+.|.... ...|++ +|... . .+.-.+ ++.+
T Consensus 271 ~~~~~~~~~~~a~~~~i~~ikpG~~~~dv~~~~~~~~~~~G~~~~--h~~Ghg----iGl~~~~~~~e~~~~l~~~~~~~ 344 (391)
T TIGR02993 271 AFLDAEKAVLEGMEAGLEAAKPGNTCEDIANAFFAVLKKYGIHKD--SRTGYP----IGLSYPPDWGERTMSLRPGDNTV 344 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccC--CCceee----eccCcCCCCCCccccccCCCCce
Confidence 466788899999999999999999999999999999999886531 112221 22211 0 001112 3578
Q ss_pred CCCCCEEEEEeccccCcEEeceeeEEEccC
Q 017786 204 LQDGDIINIDVTVYLNGYHGDTSKTFLCGN 233 (366)
Q Consensus 204 l~~GDiv~iD~g~~~~GY~~D~sRT~~vG~ 233 (366)
|++|.++.|+-+.+..|+..-+.-|++|.+
T Consensus 345 L~~GMv~tvEpgiy~~~~Gvried~v~VT~ 374 (391)
T TIGR02993 345 LKPGMTFHFMTGLWMEDWGLEITESILITE 374 (391)
T ss_pred ecCCCEEEEcceeEeCCCCeEEeeEEEECC
Confidence 999999999999988777667888898853
No 56
>PRK09795 aminopeptidase; Provisional
Probab=96.33 E-value=0.044 Score=54.03 Aligned_cols=104 Identities=23% Similarity=0.259 Sum_probs=72.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHhccCCccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCeeeecCCCCcccCCC-CCCCC
Q 017786 126 SESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIP-DSRQL 204 (366)
Q Consensus 126 ~~EI~~~R~A~~ia~~~l~~~~~~i~pGvTe~ei~~~~~~~~~~~G~~ps~~~~~~fp~~v~~g~n~~~~h~~p-~~~~l 204 (366)
+++-+.+|+..+++.++.+++.+.++||++-.||++.+++.+.+.|.........|+ .+.....+. +.-.| ++.+|
T Consensus 236 ~~~~~~~~~~~~~v~~a~~~~~~~~rpG~~~~~v~~~~~~~~~~~g~~~~~~h~~GH--giGl~~he~-p~i~~~~~~~l 312 (361)
T PRK09795 236 SAESHPLFNVYQIVLQAQLAAISAIRPGVRCQQVDDAARRVITEAGYGDYFGHNTGH--AIGIEVHED-PRFSPRDTTTL 312 (361)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCccCCCCCCc--cCCccccCC-CCcCCCCCCCc
Confidence 555567888999999999999999999999999999999999998864321111111 111111111 11112 46889
Q ss_pred CCCCEEEEEeccccCcE-EeceeeEEEcc
Q 017786 205 QDGDIINIDVTVYLNGY-HGDTSKTFLCG 232 (366)
Q Consensus 205 ~~GDiv~iD~g~~~~GY-~~D~sRT~~vG 232 (366)
++|.++.|+-+.+..|. -.-+.-|++|.
T Consensus 313 ~~gmv~~iEpgiy~~~~~gvriEd~v~vt 341 (361)
T PRK09795 313 QPGMLLTVEPGIYLPGQGGVRIEDVVLVT 341 (361)
T ss_pred CCCCEEEECCEEEeCCCCEEEEeeEEEEC
Confidence 99999999999876553 34567888884
No 57
>cd01090 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. Hydrolyzes creatine to sarcosine and urea.
Probab=96.29 E-value=0.055 Score=49.86 Aligned_cols=100 Identities=13% Similarity=0.129 Sum_probs=68.5
Q ss_pred HHHHHHHHHHHHHHHHhHhccCCccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCeeeecCCCCcccC------CCCCCCC
Q 017786 131 KMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHG------IPDSRQL 204 (366)
Q Consensus 131 ~~R~A~~ia~~~l~~~~~~i~pGvTe~ei~~~~~~~~~~~G~~ps~~~~~~fp~~v~~g~n~~~~h~------~p~~~~l 204 (366)
..|++.+++.++++++.+.+|||++-.||++++.+.+.++|...... +++...+.....+. .|+ ..++.+|
T Consensus 110 ~~~~~~~~~~ea~~~~~~~~rpG~~~~~v~~a~~~~~~~~G~~~~~~--~~~GHgiGl~~he~-~~~~g~~~~~~~~~~L 186 (228)
T cd01090 110 AHLKIWEANVAVHERGLELIKPGARCKDIAAELNEMYREHDLLRYRT--FGYGHSFGVLSHYY-GREAGLELREDIDTVL 186 (228)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCcccc--cccCcccccccccC-CCccccccCCCCCCcc
Confidence 36788889999999999999999999999999999999998654211 11111222111121 111 1135889
Q ss_pred CCCCEEEEEeccccC----c-EEeceeeEEEccC
Q 017786 205 QDGDIINIDVTVYLN----G-YHGDTSKTFLCGN 233 (366)
Q Consensus 205 ~~GDiv~iD~g~~~~----G-Y~~D~sRT~~vG~ 233 (366)
++|.++.|+-+.++. | .-.-+..|++|.+
T Consensus 187 e~GMV~~iEP~i~~~~~~~g~gG~ried~v~Vt~ 220 (228)
T cd01090 187 EPGMVVSMEPMIMLPEGQPGAGGYREHDILVINE 220 (228)
T ss_pred CCCCEEEECCEEeecccCCCCcEEEeeeEEEECC
Confidence 999999999987752 3 2233778888854
No 58
>PRK12318 methionine aminopeptidase; Provisional
Probab=96.28 E-value=0.038 Score=52.93 Aligned_cols=86 Identities=19% Similarity=0.247 Sum_probs=59.4
Q ss_pred HHHHHHHHHHHHHHHHhHhccCCccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCeeeecCCCC--cccCCC-CCCCCCCC
Q 017786 131 KMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNEC--MCHGIP-DSRQLQDG 207 (366)
Q Consensus 131 ~~R~A~~ia~~~l~~~~~~i~pGvTe~ei~~~~~~~~~~~G~~ps~~~~~~fp~~v~~g~n~~--~~h~~p-~~~~l~~G 207 (366)
..|+..+++.++++++.+.++||++-.||..++.+.+.+.|.... ..+.|+. +.....+. +.+..+ ++.+|++|
T Consensus 159 ~~~~~~~~~~~a~~~~i~~~rpG~~~~dv~~a~~~~~~~~G~~~~-~~~~GHg--IGl~~hE~P~i~~~~~~~~~~L~~G 235 (291)
T PRK12318 159 IKKKVCQASLECLNAAIAILKPGIPLYEIGEVIENCADKYGFSVV-DQFVGHG--VGIKFHENPYVPHHRNSSKIPLAPG 235 (291)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCccC-CCcccCC--cCccccCCCcccCcCCCCCCEeCCC
Confidence 457788899999999999999999999999999999999986531 1111221 11221111 112122 24679999
Q ss_pred CEEEEEeccccC
Q 017786 208 DIINIDVTVYLN 219 (366)
Q Consensus 208 Div~iD~g~~~~ 219 (366)
.++.|+-+.+..
T Consensus 236 MV~~iEP~i~~~ 247 (291)
T PRK12318 236 MIFTIEPMINVG 247 (291)
T ss_pred CEEEECCEEEcC
Confidence 999999877654
No 59
>PRK07281 methionine aminopeptidase; Reviewed
Probab=96.19 E-value=0.04 Score=52.69 Aligned_cols=83 Identities=10% Similarity=0.088 Sum_probs=59.0
Q ss_pred HHHHHHHHHHHHHHHHhHhccCCccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCeeeecCC--CC--cccC-CC-CCCCC
Q 017786 131 KMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVN--EC--MCHG-IP-DSRQL 204 (366)
Q Consensus 131 ~~R~A~~ia~~~l~~~~~~i~pGvTe~ei~~~~~~~~~~~G~~ps~~~~~~fp~~v~~g~n--~~--~~h~-~p-~~~~l 204 (366)
..|++.+++.++++++++.++||++-.||+.++++.+.++|... ...+.|+ .+|.+ +. +.++ .+ .+.+|
T Consensus 149 ~~~~l~~~~~ea~~~ai~~~kpG~~~~di~~a~~~~~~~~G~~~-~~~~~GH----GIGl~~hE~P~i~~~~~~~~~~~L 223 (286)
T PRK07281 149 EVKNLMDVTKEAMYRGIEQAVVGNRIGDIGAAIQEYAESRGYGV-VRDLVGH----GVGPTMHEEPMVPNYGTAGRGLRL 223 (286)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcc-CCCeeee----eCCCccCCCCcCCCcccCCCCCEE
Confidence 46789999999999999999999999999999999999887643 2122111 12221 11 1221 12 34679
Q ss_pred CCCCEEEEEecccc
Q 017786 205 QDGDIINIDVTVYL 218 (366)
Q Consensus 205 ~~GDiv~iD~g~~~ 218 (366)
++|.++.|.-+.+.
T Consensus 224 e~GMV~tiEPgiy~ 237 (286)
T PRK07281 224 REGMVLTIEPMINT 237 (286)
T ss_pred CCCCEEEECCeeEc
Confidence 99999999988864
No 60
>TIGR00495 crvDNA_42K 42K curved DNA binding protein. Proteins identified by this model have been identified in a number of species as a nuclear (but not nucleolar) protein with a cell cycle dependence. Various names given to members of this family have included cell cycle protein p38-2G4, DNA-binding protein GBP16, and proliferation-associated protein 1. This protein is closely related to methionine aminopeptidase, a cobolt-binding protein.
Probab=96.16 E-value=0.056 Score=53.98 Aligned_cols=103 Identities=14% Similarity=0.162 Sum_probs=69.4
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCccCC--ceeeccCC--ccccCCccccCCC---CCCcc
Q 017786 237 GLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGVVER--FVGHGVGK--VFHSEPIIYHNRN---ENPGC 309 (366)
Q Consensus 237 e~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~ai~~~~~~~G~~~~~~--~~GHgIG~--~~he~P~i~~~~~---~~~~~ 309 (366)
..+++-+.+.++++.+++.++||++..||.+.+++.+++.+-..+.. ...+|++. .+--.-.+.|+.+ +++.+
T Consensus 21 ~~r~Aa~Ia~~~l~~~~~~ikpG~t~~el~~~~~~~i~~~~a~~~~~~~~~~~g~afpt~vSvN~~v~H~~P~~~d~~~~ 100 (389)
T TIGR00495 21 KYKMAGEIANNVLKSVVEACSPGAKVVDICEKGDAFIMEETAKIFKKEKEMEKGIAFPTCISVNNCVGHFSPLKSDQDYI 100 (389)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHhhhhhhcccccccCCCCCCeEEecCCeeeCCCCCCCCCCcC
Confidence 45677788888999999999999999999999988888754221111 01122221 0111223444433 23478
Q ss_pred ccCCcEEEEccceecCcccccccCCCCeeeecCCCceEEEEEEEEEeC
Q 017786 310 MVEGQTFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHTILITR 357 (366)
Q Consensus 310 l~~GmvftiEP~i~~~~~~~~~~~d~wt~~t~dg~~~a~~EdtvlVTe 357 (366)
|++|.++.|+-+... .++.+-..+|+.|.+
T Consensus 101 Lk~GDvVkIDlG~~i------------------dGY~aD~arTv~vG~ 130 (389)
T TIGR00495 101 LKEGDVVKIDLGCHI------------------DGFIALVAHTFVVGV 130 (389)
T ss_pred cCCCCEEEEEEEEEE------------------CCEEEEEEEEEEECC
Confidence 999999999988765 235677889999974
No 61
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This entry contains proteins that belong to MEROPS peptidase family M24 (clan MG), which share a common structural-fold, the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. The entry also contains proteins that have lost catalytic activity, for example Spt16, which is a component of the FACT complex. The crystal structure of the N-terminal domain of Spt16, determined to 2.1A, reveals an aminopeptidase P fold whose enzymatic activity has been lost. This fold binds directly to histones H3-H4 through a interaction with their globular core domains, as well as with their N-terminal tails []. The FACT complex is a stable heterodimer in Saccharomyces cerevisiae (Baker's yeast) comprising Spt16p (P32558 from SWISSPROT, IPR013953 from INTERPRO) and Pob3p (Q04636 from SWISSPROT, IPR000969 from INTERPRO). The complex plays a role in transcription initiation and promotes binding of TATA-binding protein (TBP) to a TATA box in chromatin []; it also facilitates RNA Polymerase II transcription elongation through nucleosomes by destabilising and then reassembling nucleosome structure [, , ]. ; GO: 0009987 cellular process; PDB: 4A6V_B 4A6W_A 3CTZ_A 3IG4_B 2B3H_A 2NQ6_A 2NQ7_A 2GZ5_A 2G6P_A 2B3L_A ....
Probab=96.15 E-value=0.053 Score=48.72 Aligned_cols=98 Identities=13% Similarity=0.130 Sum_probs=68.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHH-HHHcCCCccCCceeeccCCccccCCccccCCCCCCccccCCc
Q 017786 236 DGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEH-AEKYGFGVVERFVGHGVGKVFHSEPIIYHNRNENPGCMVEGQ 314 (366)
Q Consensus 236 ~e~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~ai~~~-~~~~G~~~~~~~~GHgIG~~~he~P~i~~~~~~~~~~l~~Gm 314 (366)
+..|++.+.+.++++++++.++||++-.||...+.+. +.+.|........-=+.|... .+.++. .++..|++|+
T Consensus 1 e~~R~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~~g~~~~~~~~~~~~g~~~----~~~~~~-~~~~~l~~gd 75 (207)
T PF00557_consen 1 ECMRKAARIADAAMEAAMEALRPGMTEYEIAAAIERAMLRRHGGEEPAFPPIVGSGPNT----DLPHYT-PTDRRLQEGD 75 (207)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSTTCBHHHHHHHHHHHHHHHTTTTEESSESEEEECCCC----GETTTB-CCSSBESTTE
T ss_pred CHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHHcCCCcccCCceEecCCcc----eeccee-ccceeeecCC
Confidence 3578899999999999999999999999999999988 677785422211111222211 123332 2467899999
Q ss_pred EEEEccceecCcccccccCCCCeeeecCCCceEEEEEEEEEe
Q 017786 315 TFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHTILIT 356 (366)
Q Consensus 315 vftiEP~i~~~~~~~~~~~d~wt~~t~dg~~~a~~EdtvlVT 356 (366)
++.++-+... +++.+.+.-|+++.
T Consensus 76 ~v~id~~~~~------------------~gy~~d~~Rt~~~G 99 (207)
T PF00557_consen 76 IVIIDFGPRY------------------DGYHADIARTFVVG 99 (207)
T ss_dssp EEEEEEEEEE------------------TTEEEEEEEEEESS
T ss_pred cceeecccee------------------eeeEeeeeeEEEEe
Confidence 9999987654 23556677777653
No 62
>cd01087 Prolidase Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.
Probab=96.06 E-value=0.06 Score=49.83 Aligned_cols=102 Identities=18% Similarity=0.175 Sum_probs=67.2
Q ss_pred HHHHHHHHHHHHHHHHhHhccCCccHHHHHHHHHHHHHHhC----CCC------------CCCCCCCCCCeeeecCCCCc
Q 017786 131 KMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAG----AYP------------SPLGYGGFPKSVCTSVNECM 194 (366)
Q Consensus 131 ~~R~A~~ia~~~l~~~~~~i~pGvTe~ei~~~~~~~~~~~G----~~p------------s~~~~~~fp~~v~~g~n~~~ 194 (366)
..|+..+.+.++++.+.+.++||++-.||..++.+.+.+.+ ..+ ..+..+++-..+.....+ .
T Consensus 104 ~~~~~~~~~~~a~~~~i~~~rpG~~~~~v~~a~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~h~~GhgiGl~~~e-~ 182 (243)
T cd01087 104 EQRELYEAVLAAQKAAIAACKPGVSYEDIHLLAHRVLAEGLKELGILKGDVDEIVESGAYAKFFPHGLGHYLGLDVHD-V 182 (243)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcCcccCchHhhhhhhhhhhhcCCCCccccCccccc-C
Confidence 45677788889999999999999999999999999887663 211 000001111112111222 1
Q ss_pred ccC--CC-CCCCCCCCCEEEEEeccccCc-----------EEeceeeEEEccC
Q 017786 195 CHG--IP-DSRQLQDGDIINIDVTVYLNG-----------YHGDTSKTFLCGN 233 (366)
Q Consensus 195 ~h~--~p-~~~~l~~GDiv~iD~g~~~~G-----------Y~~D~sRT~~vG~ 233 (366)
++. .+ ++.+|++|.++.|..+.+..+ +..-+..|++|.+
T Consensus 183 p~~~~~~~~~~~l~~GMv~~iEp~iy~~~~~~~~~~~~~~~g~~ied~v~Vt~ 235 (243)
T cd01087 183 GGYLRYLRRARPLEPGMVITIEPGIYFIPDLLDVPEYFRGGGIRIEDDVLVTE 235 (243)
T ss_pred ccccccCCCCCCCCCCCEEEECCEEEeCCcccccccccceeEEEeeeEEEEcC
Confidence 211 22 457899999999999887654 6666788888843
No 63
>TIGR00501 met_pdase_II methionine aminopeptidase, type II. Methionine aminopeptidase (map) is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. The role of this protein in general is to produce the mature amino end of cytosolic proteins by removing the N-terminal methionine. This model describes type II, among which the eukaryotic members typically have an N-terminal extension not present in archaeal members. It can act cotranslationally. The enzyme from rat has been shown to associate with translation initiation factor 2 (IF-2) and may have a role in translational regulation.
Probab=95.97 E-value=0.1 Score=50.17 Aligned_cols=96 Identities=8% Similarity=0.072 Sum_probs=68.3
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCccCCceeeccCCccccCCccccCCC--CCCccccCCc
Q 017786 237 GLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGVVERFVGHGVGKVFHSEPIIYHNRN--ENPGCMVEGQ 314 (366)
Q Consensus 237 e~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~ai~~~~~~~G~~~~~~~~GHgIG~~~he~P~i~~~~~--~~~~~l~~Gm 314 (366)
..+++-+.+.++++.+++.++||++..||.+.+++.+.+.|... .| ...+.. .....|+.+ +++.+|++|.
T Consensus 7 ~~r~A~~I~~~~~~~~~~~i~~G~se~el~~~~e~~~~~~g~~~--aF-p~~vs~----n~~~~H~~p~~~d~~~l~~GD 79 (295)
T TIGR00501 7 KWIEAGKIHSKVRREAADRIVPGVKLLEVAEFVENRIRELGAEP--AF-PCNISI----NECAAHFTPKAGDKTVFKDGD 79 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHcCCCC--CC-Ccceec----CCEeeCCCCCCCcCccCCCCC
Confidence 46788888899999999999999999999999999999998652 11 001111 112223322 2456899999
Q ss_pred EEEEccceecCcccccccCCCCeeeecCCCceEEEEEEEEEeC
Q 017786 315 TFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHTILITR 357 (366)
Q Consensus 315 vftiEP~i~~~~~~~~~~~d~wt~~t~dg~~~a~~EdtvlVTe 357 (366)
++.|+.+... .++.+-...|+.+.+
T Consensus 80 vV~iD~G~~~------------------dGY~aD~arT~~vG~ 104 (295)
T TIGR00501 80 VVKLDLGAHV------------------DGYIADTAITVDLGD 104 (295)
T ss_pred EEEEEEeEEE------------------CCEEEEEEEEEEeCc
Confidence 9999988754 225667778887754
No 64
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4. Family members have been implicated in cell cycle control.
Probab=95.91 E-value=0.075 Score=48.89 Aligned_cols=98 Identities=20% Similarity=0.252 Sum_probs=71.6
Q ss_pred HHHHHHHHHHHHHHHHHhHhccCCccHHHHHHHHHHHHHHhCCCCC--CCCCCCCCCeeeecCCCCcccCCCCCCCCCCC
Q 017786 130 AKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPS--PLGYGGFPKSVCTSVNECMCHGIPDSRQLQDG 207 (366)
Q Consensus 130 ~~~R~A~~ia~~~l~~~~~~i~pGvTe~ei~~~~~~~~~~~G~~ps--~~~~~~fp~~v~~g~n~~~~h~~p~~~~l~~G 207 (366)
...+++.+.+.++++++.+.++||++-.||+.++++.+.+.|..+- ..+ +++...+.++.+.. .-...|++|
T Consensus 120 ~~~~~~~~~~~ea~~~~~~~~kpG~~~~dv~~a~~~~~~~~G~~~~~~~~~-h~~g~~~~~~~~~~-----~~~~~l~~g 193 (228)
T cd01089 120 GKKADVIAAAHYALEAALRLLRPGNQNSDITEAIQKVIVDYGCTPVEGVLS-HQLKRVVSSGEGKA-----KLVECVKHG 193 (228)
T ss_pred hHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHcCCEEecCccc-cCcCceEecCCCCc-----cchhhccCC
Confidence 4677888899999999999999999999999999999999995321 110 11111222221111 014669999
Q ss_pred CEEEEEeccccCc-EEeceeeEEEccC
Q 017786 208 DIINIDVTVYLNG-YHGDTSKTFLCGN 233 (366)
Q Consensus 208 Div~iD~g~~~~G-Y~~D~sRT~~vG~ 233 (366)
.++.++......| +..-+.-|+.|.+
T Consensus 194 mvf~~ep~~~~~g~~~~~~~~Tv~vt~ 220 (228)
T cd01089 194 LLFPYPVLYEKEGEVVAQFKLTVLLTP 220 (228)
T ss_pred cccccceeEccCCCeEEEEEEEEEEcC
Confidence 9999999988766 8889999999954
No 65
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=95.21 E-value=0.21 Score=49.63 Aligned_cols=97 Identities=27% Similarity=0.301 Sum_probs=71.2
Q ss_pred HHHHHHHHHHHHHHHhHhccCCccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCeeeecCCCCcccCCC------CCCCCC
Q 017786 132 MRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIP------DSRQLQ 205 (366)
Q Consensus 132 ~R~A~~ia~~~l~~~~~~i~pGvTe~ei~~~~~~~~~~~G~~ps~~~~~~fp~~v~~g~n~~~~h~~p------~~~~l~ 205 (366)
.|+..++..++++++.++++||++-.|++..+++.+.+.|....... ++...+ | ...-.|-.| ++.+|+
T Consensus 264 ~~~iy~~V~~aq~aa~~~~rpG~~~~~vd~~ar~~i~~~g~~~~~~h--~~GHgv--G-~~l~vhE~p~~~~~~~~~~L~ 338 (384)
T COG0006 264 QREIYEAVLEAQEAAIAAIRPGVTGGEVDAAARQVLEKAGYGLYFLH--GTGHGV--G-FVLDVHEHPQYLSPGSDTTLE 338 (384)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHhcCCcccccC--CccccC--C-CCcccCcCccccCCCCCcccc
Confidence 45778889999999999999999999999999999999765432111 111111 1 011123233 467899
Q ss_pred CCCEEEEEecccc-CcEEeceeeEEEccC
Q 017786 206 DGDIINIDVTVYL-NGYHGDTSKTFLCGN 233 (366)
Q Consensus 206 ~GDiv~iD~g~~~-~GY~~D~sRT~~vG~ 233 (366)
+|-++.++-+.++ +.+-.-+..+++|.+
T Consensus 339 ~GMv~t~Epg~y~~g~~GirIEd~vlVte 367 (384)
T COG0006 339 PGMVFSIEPGIYIPGGGGVRIEDTVLVTE 367 (384)
T ss_pred CCcEEEeccccccCCCceEEEEEEEEEcC
Confidence 9999999999774 558899999999965
No 66
>PTZ00053 methionine aminopeptidase 2; Provisional
Probab=94.73 E-value=0.25 Score=50.32 Aligned_cols=102 Identities=14% Similarity=0.191 Sum_probs=69.0
Q ss_pred HHHHHHHHHHHHHHHHhHhccCCccHHHHHHHHHHHHHHhCCCC--CCCCCCCCCCeeeecCCCCcccC---CC-----C
Q 017786 131 KMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYP--SPLGYGGFPKSVCTSVNECMCHG---IP-----D 200 (366)
Q Consensus 131 ~~R~A~~ia~~~l~~~~~~i~pGvTe~ei~~~~~~~~~~~G~~p--s~~~~~~fp~~v~~g~n~~~~h~---~p-----~ 200 (366)
..+...+++.+|++++++.++||++-.||++++++.+.+.|..- ..+.+..+.....-|......|+ +| +
T Consensus 264 ~~~~L~eAv~eA~~aaI~~~kpGv~~~dI~~AIqevies~G~e~~Gk~f~~k~I~nltGHgIG~y~iHe~k~iP~v~~~~ 343 (470)
T PTZ00053 264 KYDPLLQATKDATNTGIKEAGIDVRLSDIGAAIQEVIESYEVEIKGKTYPIKSIRNLNGHSIGPYIIHGGKSVPIVKGGE 343 (470)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcccCcccccccccCCcccCCCCccccCCCcCCeeCCCC
Confidence 56778888999999999999999999999999999999998530 00000000111111222212443 33 3
Q ss_pred CCCCCCCCEEEEEeccc-cCcEEeceeeEEEcc
Q 017786 201 SRQLQDGDIINIDVTVY-LNGYHGDTSKTFLCG 232 (366)
Q Consensus 201 ~~~l~~GDiv~iD~g~~-~~GY~~D~sRT~~vG 232 (366)
..+|++|+++.|+..+. -.||..|-.++-+..
T Consensus 344 ~~~LeeGmVfaIEPf~stG~G~v~~~~~~siY~ 376 (470)
T PTZ00053 344 NTRMEEGELFAIETFASTGRGYVNEDLECSHYM 376 (470)
T ss_pred CCEecCCCEEEEcceeeCCCCeEecCCCceeee
Confidence 46799999999998765 578888866665553
No 67
>PRK10879 proline aminopeptidase P II; Provisional
Probab=93.43 E-value=0.78 Score=46.56 Aligned_cols=100 Identities=16% Similarity=0.284 Sum_probs=63.8
Q ss_pred HHHHHHHHHHHHHHHhHhccCCccHHHHHHHHHHHHH----HhCCCCCC-------CCCC-CCCCeeeecCCCCcccCCC
Q 017786 132 MRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMII----EAGAYPSP-------LGYG-GFPKSVCTSVNECMCHGIP 199 (366)
Q Consensus 132 ~R~A~~ia~~~l~~~~~~i~pGvTe~ei~~~~~~~~~----~~G~~ps~-------~~~~-~fp~~v~~g~n~~~~h~~p 199 (366)
.|+..+++.++++++.+.++||++-.+|...+.+.+. +.|..+.. .++. .|+..+.-+.. .-.|-.|
T Consensus 284 q~~~y~~vl~a~~aai~~~kpG~~~~~v~~~~~~~~~~~l~~~Gl~~~~~~~~~~~~~~~~~~~Hg~GH~iG-ldvHd~~ 362 (438)
T PRK10879 284 QREIYDIVLESLETSLRLYRPGTSIREVTGEVVRIMVSGLVKLGILKGDVDQLIAENAHRPFFMHGLSHWLG-LDVHDVG 362 (438)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHhCCcCCCHHHHHHhccCccccCCCCccccC-cCcCcCC
Confidence 4677778888999999999999999999988876544 33432210 0011 12222211110 1123222
Q ss_pred -----CCCCCCCCCEEEEEeccccC----------cEEeceeeEEEcc
Q 017786 200 -----DSRQLQDGDIINIDVTVYLN----------GYHGDTSKTFLCG 232 (366)
Q Consensus 200 -----~~~~l~~GDiv~iD~g~~~~----------GY~~D~sRT~~vG 232 (366)
++++|++|-++.|+-+.++. |+..-+.-|++|.
T Consensus 363 ~~~~~~~~~L~~GmV~tvEPgiY~~~~~~~~~~~~~~GiRiED~VlVT 410 (438)
T PRK10879 363 VYGQDRSRILEPGMVLTVEPGLYIAPDADVPEQYRGIGIRIEDDIVIT 410 (438)
T ss_pred CcCCCCCCcCCCCCEEEECCEEEECCCcCcccccCccEEEeccEEEEC
Confidence 35789999999999988753 4667788889884
No 68
>cd01085 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide.
Probab=91.00 E-value=3.8 Score=37.60 Aligned_cols=95 Identities=19% Similarity=0.167 Sum_probs=60.1
Q ss_pred HHHHHHHHHHHHHHhHhc-cCCccHHHHHHHHHHHHHHhCCCC-CCCCCCCCCCeee--ecCCCC--cccCCCCCCCCCC
Q 017786 133 RAACELAARVLDAAGKLV-RPSVTTNEIDKAVHQMIIEAGAYP-SPLGYGGFPKSVC--TSVNEC--MCHGIPDSRQLQD 206 (366)
Q Consensus 133 R~A~~ia~~~l~~~~~~i-~pGvTe~ei~~~~~~~~~~~G~~p-s~~~~~~fp~~v~--~g~n~~--~~h~~p~~~~l~~ 206 (366)
|++.+++.++..++.+.+ +||++-.+|++.+++.+.+.|.+- ...+ + .+. ....+. +.+...++++|++
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~~~g~~~~h~~G---H--gIG~~l~~hE~P~i~~~~~~~~~L~~ 188 (224)
T cd01085 114 KRDYTLVLKGHIALARAKFPKGTTGSQLDALARQPLWKAGLDYGHGTG---H--GVGSFLNVHEGPQSISPAPNNVPLKA 188 (224)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhCCCCCCCCC---C--CCCCCCcCCCCCCcCCcCCCCCCcCC
Confidence 344445556666666666 599999999999999999888641 1111 1 111 011111 1101123578999
Q ss_pred CCEEEEEeccccC-cEEeceeeEEEcc
Q 017786 207 GDIINIDVTVYLN-GYHGDTSKTFLCG 232 (366)
Q Consensus 207 GDiv~iD~g~~~~-GY~~D~sRT~~vG 232 (366)
|.++.|+-+.+.. ....-+..|++|.
T Consensus 189 GmvftiEP~iy~~g~~gvried~v~Vt 215 (224)
T cd01085 189 GMILSNEPGYYKEGKYGIRIENLVLVV 215 (224)
T ss_pred CCEEEECCEeEeCCCeEEEeeEEEEEe
Confidence 9999999998854 4556688888884
No 69
>PRK13607 proline dipeptidase; Provisional
Probab=89.47 E-value=3 Score=42.42 Aligned_cols=89 Identities=19% Similarity=0.230 Sum_probs=55.9
Q ss_pred HHHHHHHHHHHHHHHhHhccCCccHHHHHHHHHHHH----HHhCCCCC-------CCCC--CCCCCee----eecCCCCc
Q 017786 132 MRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMI----IEAGAYPS-------PLGY--GGFPKSV----CTSVNECM 194 (366)
Q Consensus 132 ~R~A~~ia~~~l~~~~~~i~pGvTe~ei~~~~~~~~----~~~G~~ps-------~~~~--~~fp~~v----~~g~n~~~ 194 (366)
.++..+++.++++++.+.++||++-.||..++++.+ .+.|.... .-++ ..||..+ ...+.+.-
T Consensus 270 ~~~ly~~v~~aq~aai~~ikPG~~~~dv~~aa~~~i~~~L~~~Gl~~g~~~~~~~~~g~~~~~f~HglGH~iGldvHd~~ 349 (443)
T PRK13607 270 FAALIKDVNKEQLALIATMKPGVSYVDLHIQMHQRIAKLLRKFQIVTGLSEEAMVEQGITSPFFPHGLGHPLGLQVHDVA 349 (443)
T ss_pred HHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHhCCCceEecCCCccCccCcccccCC
Confidence 346788999999999999999999999998887655 44454421 0011 0123222 11111210
Q ss_pred cc-------------CCC---CCCCCCCCCEEEEEeccccCc
Q 017786 195 CH-------------GIP---DSRQLQDGDIINIDVTVYLNG 220 (366)
Q Consensus 195 ~h-------------~~p---~~~~l~~GDiv~iD~g~~~~G 220 (366)
.. +.| ..++|++|.+++|+-|+++.+
T Consensus 350 ~~~~~~~~~~~~~~~~~~~l~~~~~L~~GmV~TvEPGiY~~~ 391 (443)
T PRK13607 350 GFMQDDRGTHLAAPEKHPYLRCTRVLEPGMVLTIEPGLYFID 391 (443)
T ss_pred CcccccccccccccccccccccCCcCCCCcEEEECCeeeeCh
Confidence 00 001 347899999999999998764
No 70
>KOG2776 consensus Metallopeptidase [General function prediction only]
Probab=80.94 E-value=7.3 Score=38.14 Aligned_cols=92 Identities=23% Similarity=0.336 Sum_probs=60.5
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHH--------HHH-c----CCCc-----cCCceeeccCCccccCCcc
Q 017786 238 LKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEH--------AEK-Y----GFGV-----VERFVGHGVGKVFHSEPII 299 (366)
Q Consensus 238 ~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~ai~~~--------~~~-~----G~~~-----~~~~~GHgIG~~~he~P~i 299 (366)
.+..-+.+..++...++.|+||++..||-..-.+. +++ . |... +.+..+ |-.|..
T Consensus 24 Yk~AgeI~n~~lk~V~~~~~~gasv~eiC~~GD~~i~E~t~kiYK~eK~~~KGIAfPT~Isvnncv~-------h~sPlk 96 (398)
T KOG2776|consen 24 YKMAGEIVNKVLKSVVELCQPGASVREICEKGDSLILEETGKIYKKEKDFEKGIAFPTSISVNNCVC-------HFSPLK 96 (398)
T ss_pred hhhHHHHHHHHHHHHHHHhcCCchHHHHHHhhhHHHHHHHHHHHhhhhhhhccccccceecccceee-------ccCcCC
Confidence 34556677788888889999999999887554443 333 1 2210 112222 233433
Q ss_pred ccCCCCCCccccCCcEEEEccceecCcccccccCCCCeeeecCCCceEEEEEEEEEeCC
Q 017786 300 YHNRNENPGCMVEGQTFTIEPILTMGSIECITWPDNWTTLTADGNPAAQFEHTILITRT 358 (366)
Q Consensus 300 ~~~~~~~~~~l~~GmvftiEP~i~~~~~~~~~~~d~wt~~t~dg~~~a~~EdtvlVTed 358 (366)
. +.+..|++|.++-|.-++.+ || +.+-..||++|++.
T Consensus 97 s----d~~~~Lk~GDvVKIdLG~Hi---------DG---------fiA~vaHT~VV~~~ 133 (398)
T KOG2776|consen 97 S----DADYTLKEGDVVKIDLGVHI---------DG---------FIALVAHTIVVGPA 133 (398)
T ss_pred C----CCcccccCCCEEEEEeeeee---------cc---------ceeeeeeeEEeccC
Confidence 2 34679999999999988865 33 56778999999864
No 71
>PF07305 DUF1454: Protein of unknown function (DUF1454); InterPro: IPR009918 This family consists of several Enterobacterial sequences of around 200 residues in length, which are often known as YiiQ proteins. The function of this family is unknown.
Probab=69.67 E-value=28 Score=31.06 Aligned_cols=75 Identities=17% Similarity=0.194 Sum_probs=55.9
Q ss_pred CHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCccCCceeeccCCccccCCccccCCCCCCccccCCc
Q 017786 235 SDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGFGVVERFVGHGVGKVFHSEPIIYHNRNENPGCMVEGQ 314 (366)
Q Consensus 235 ~~e~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~ai~~~~~~~G~~~~~~~~GHgIG~~~he~P~i~~~~~~~~~~l~~Gm 314 (366)
.+|++..-+.+.+-+.+.+...-|..+..+.-+.+++.+.+..- .+|.-|-+|-- .+|... ++ +.|.
T Consensus 114 ~~e~kaar~~a~~YmaAl~r~F~Ptls~eQs~~kl~~lL~~gk~---~~yy~q~~GAi----RYVvad-~g-----ekgl 180 (200)
T PF07305_consen 114 GPEQKAARALAIEYMAALMRQFEPTLSPEQSQEKLQKLLTKGKG---SRYYSQTEGAI----RYVVAD-NG-----EKGL 180 (200)
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCcCCHHHHHHHHHHHHHcCCC---CcceeeccCce----EEEEec-CC-----Ccee
Confidence 36677777888888888999999999999999999998887533 46677777742 223321 11 6799
Q ss_pred EEEEccce
Q 017786 315 TFTIEPIL 322 (366)
Q Consensus 315 vftiEP~i 322 (366)
+|+|||.=
T Consensus 181 TFAVEPIK 188 (200)
T PF07305_consen 181 TFAVEPIK 188 (200)
T ss_pred EEEeeeee
Confidence 99999953
No 72
>KOG1189 consensus Global transcriptional regulator, cell division control protein [Amino acid transport and metabolism]
Probab=68.48 E-value=21 Score=38.43 Aligned_cols=97 Identities=20% Similarity=0.261 Sum_probs=69.0
Q ss_pred HHHHHHHHHHHHHHHhHhccCCccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCeeeecC------CCCcccCCCCCCCCC
Q 017786 132 MRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSV------NECMCHGIPDSRQLQ 205 (366)
Q Consensus 132 ~R~A~~ia~~~l~~~~~~i~pGvTe~ei~~~~~~~~~~~G~~ps~~~~~~fp~~v~~g~------n~~~~h~~p~~~~l~ 205 (366)
|..+....-.+.+++..+++||.+-.+|...+...+.+.+-.-. ..|.+.+.+|. ++.+. ..-++++|+
T Consensus 259 mq~nY~fLl~aqe~il~~lrpG~ki~dVY~~~l~~v~k~~Pel~----~~~~k~lG~~iGlEFREssl~i-naKnd~~lk 333 (960)
T KOG1189|consen 259 MQENYEFLLAAQEEILKLLRPGTKIGDVYEKALDYVEKNKPELV----PNFTKNLGFGIGLEFRESSLVI-NAKNDRVLK 333 (960)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHhcCcchh----hhhhhhcccccceeeecccccc-cccchhhhc
Confidence 56777777888889999999999999999999999988864311 12333332221 11111 122569999
Q ss_pred CCCEEEEEeccc-------cCcEEeceeeEEEccC
Q 017786 206 DGDIINIDVTVY-------LNGYHGDTSKTFLCGN 233 (366)
Q Consensus 206 ~GDiv~iD~g~~-------~~GY~~D~sRT~~vG~ 233 (366)
+|.+.+|.+|.. -+-|.--++-|+.||+
T Consensus 334 ~gmvFni~lGf~nl~n~~~~~~yaL~l~DTvlv~e 368 (960)
T KOG1189|consen 334 KGMVFNISLGFSNLTNPESKNSYALLLSDTVLVGE 368 (960)
T ss_pred cCcEEEEeeccccccCcccccchhhhccceeeecC
Confidence 999999999852 2347777899999986
No 73
>KOG2775 consensus Metallopeptidase [General function prediction only]
Probab=61.45 E-value=1.1e+02 Score=29.65 Aligned_cols=83 Identities=14% Similarity=0.213 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHH----HcCCCccCCceeeccCCcc-ccCCccccCC--CCCCc
Q 017786 236 DGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAE----KYGFGVVERFVGHGVGKVF-HSEPIIYHNR--NENPG 308 (366)
Q Consensus 236 ~e~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~ai~~~~~----~~G~~~~~~~~GHgIG~~~-he~P~i~~~~--~~~~~ 308 (366)
.+.++..++-+.+...+.+.+|||+++-||-+.+++-.+ +.|.. .-.|...|..+ |+. +||. .++.+
T Consensus 86 ~d~rraAE~HRqvR~yv~s~ikPGmtm~ei~e~iEnttR~li~e~gl~---aGi~FPtG~SlN~cA---AHyTpNaGd~t 159 (397)
T KOG2775|consen 86 QDLRRAAEAHRQVRKYVQSIIKPGMTMIEICETIENTTRKLILENGLN---AGIGFPTGCSLNHCA---AHYTPNAGDKT 159 (397)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHhcccc---ccccCCCcccccchh---hhcCCCCCCce
Confidence 345667777778888888999999999999988876544 45554 22333344332 222 2222 24678
Q ss_pred cccCCcEEEEccceec
Q 017786 309 CMVEGQTFTIEPILTM 324 (366)
Q Consensus 309 ~l~~GmvftiEP~i~~ 324 (366)
+|+...|.-|+-+...
T Consensus 160 VLqydDV~KiDfGthi 175 (397)
T KOG2775|consen 160 VLKYDDVMKIDFGTHI 175 (397)
T ss_pred eeeecceEEEeccccc
Confidence 9999999999877654
No 74
>cd01666 TGS_DRG_C TGS_DRG_C: DRG (developmentally regulated GTP-binding protein) represents a family of GTP-binding proteins that includes two members, DRG1 and DRG2. DRG1 and DRG2 have a C-terminal TGS domain (named after the ThrRS, GTPase, and SpoT proteins where it occurs) with a predominantly beta-sheet structure. The function of TGS is unknown but its presence in two types of regulatory proteins (the DRG GTPases and guanosine polyphosphate phosphohydrolases/synthetases) suggests a ligand (most likely nucleotide)-binding, regulatory role.
Probab=60.74 E-value=31 Score=25.97 Aligned_cols=52 Identities=15% Similarity=0.270 Sum_probs=33.1
Q ss_pred ccCCccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCeeeecCCC-CcccCCCCCCCCCCCCEEEE
Q 017786 150 VRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNE-CMCHGIPDSRQLQDGDIINI 212 (366)
Q Consensus 150 i~pGvTe~ei~~~~~~~~~~~G~~ps~~~~~~fp~~v~~g~n~-~~~h~~p~~~~l~~GDiv~i 212 (366)
++.|-|-.+++..++..+.+.=.+. ...|.+. ....-.+-+.+|++||+|.|
T Consensus 21 L~~GaTV~D~a~~iH~di~~~f~~A-----------~v~g~s~~~~gq~Vgl~~~L~d~DvVeI 73 (75)
T cd01666 21 LRRGSTVEDVCNKIHKDLVKQFKYA-----------LVWGSSVKHSPQRVGLDHVLEDEDVVQI 73 (75)
T ss_pred ECCCCCHHHHHHHHHHHHHHhCCee-----------EEeccCCcCCCeECCCCCEecCCCEEEE
Confidence 5679999999999998776642221 1112111 11223456789999999987
No 75
>PF00254 FKBP_C: FKBP-type peptidyl-prolyl cis-trans isomerase; InterPro: IPR001179 Synonym(s): Peptidylprolyl cis-trans isomerase FKBP-type peptidylprolyl isomerases (5.2.1.8 from EC) in vertebrates, are receptors for the two immunosuppressants, FK506 and rapamycin. The drugs inhibit T cell proliferation by arresting two distinct cytoplasmic signal transmission pathways. Peptidylprolyl isomerases accelerate protein folding by catalysing the cis-trans isomerisation of proline imidic peptide bonds in oligopeptides. These proteins are found in a variety of organisms.; GO: 0006457 protein folding; PDB: 1IX5_A 3JXV_A 3JYM_A 1T11_A 1PBK_A 1FD9_A 2VCD_A 3B7X_A 1Q6H_B 1Q6I_B ....
Probab=52.05 E-value=20 Score=27.55 Aligned_cols=51 Identities=29% Similarity=0.298 Sum_probs=37.7
Q ss_pred CCCCCCCCEEEEEecccc-CcEEecee------eEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCC
Q 017786 201 SRQLQDGDIINIDVTVYL-NGYHGDTS------KTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGA 260 (366)
Q Consensus 201 ~~~l~~GDiv~iD~g~~~-~GY~~D~s------RT~~vG~~~~e~~~l~~~~~ea~~~ai~~~kPG~ 260 (366)
++..++||.|.|++.+.. +|-.-|-+ .+|.+|.- ....+++.++..+++|.
T Consensus 2 ~~~~~~gd~V~i~y~~~~~~g~~~~~~~~~~~~~~~~~g~~---------~~i~g~e~al~~m~~Ge 59 (94)
T PF00254_consen 2 PRTPKEGDTVTIHYTGRLEDGKVFDSSYQEGEPFEFRLGSG---------QVIPGLEEALIGMKVGE 59 (94)
T ss_dssp SSSBSTTSEEEEEEEEEETTSEEEEETTTTTSEEEEETTSS---------SSSHHHHHHHTTSBTTE
T ss_pred CccCCCCCEEEEEEEEEECCCcEEEEeeecCcceeeeeccC---------ccccchhhhcccccCCC
Confidence 456889999999999876 88777777 67777751 13346777777888885
No 76
>COG5406 Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics]
Probab=49.96 E-value=53 Score=34.78 Aligned_cols=74 Identities=23% Similarity=0.242 Sum_probs=48.2
Q ss_pred HHHHHHHHHhHhccCCccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCeeee--cCCCC---cccCCCCCCCCCCCCEEEE
Q 017786 138 LAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCT--SVNEC---MCHGIPDSRQLQDGDIINI 212 (366)
Q Consensus 138 ia~~~l~~~~~~i~pGvTe~ei~~~~~~~~~~~G~~ps~~~~~~fp~~v~~--g~n~~---~~h~~p~~~~l~~GDiv~i 212 (366)
.+-...++....++||.+-.+|...+..++...|-+-.+ .|-..+.. |.... .+...-++|+||.|++++|
T Consensus 306 fl~~lQk~i~~~~rpG~~~g~iY~~~~~yi~~~~pel~p----nF~~nvG~~igiefR~s~~~~nvkn~r~lq~g~~fni 381 (1001)
T COG5406 306 FLYMLQKYILGLVRPGTDSGIIYSEAEKYISSNGPELGP----NFIYNVGLMIGIEFRSSQKPFNVKNGRVLQAGCIFNI 381 (1001)
T ss_pred HHHHHHHHHHhhcCCCCCchhHHHHHHHHHHhcCCccCc----hHhhhhhhhccccccccccceeccCCceeccccEEEE
Confidence 344445666778999999999999999999988754211 23333322 21111 1122235689999999999
Q ss_pred Eec
Q 017786 213 DVT 215 (366)
Q Consensus 213 D~g 215 (366)
.+|
T Consensus 382 s~g 384 (1001)
T COG5406 382 SLG 384 (1001)
T ss_pred eec
Confidence 985
No 77
>PRK01490 tig trigger factor; Provisional
Probab=40.95 E-value=66 Score=32.44 Aligned_cols=57 Identities=19% Similarity=0.336 Sum_probs=38.8
Q ss_pred CccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCeeeecCCCCcccCCCCCCCCCCCCEEEEEeccccCcEEece----eeE
Q 017786 153 SVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINIDVTVYLNGYHGDT----SKT 228 (366)
Q Consensus 153 GvTe~ei~~~~~~~~~~~G~~ps~~~~~~fp~~v~~g~n~~~~h~~p~~~~l~~GDiv~iD~g~~~~GY~~D~----sRT 228 (366)
-+|+.+|+..+.+....++-+- +.+++++.||.|.+|+....+|-.-+. ..+
T Consensus 131 ~vtde~vd~~i~~l~~~~a~~~------------------------~~~~~~~~gD~V~vd~~~~~~g~~~~~~~~~~~~ 186 (435)
T PRK01490 131 EVTDEDVDEELERLRKQFATLV------------------------PVERPAENGDRVTIDFVGSIDGEEFEGGKAEDFS 186 (435)
T ss_pred CCCHHHHHHHHHHHHHhCCccc------------------------cccccCCCCCEEEEEEEEEECCEECcCCCCCceE
Confidence 3688889888888777655331 234668999999999988877744222 245
Q ss_pred EEccC
Q 017786 229 FLCGN 233 (366)
Q Consensus 229 ~~vG~ 233 (366)
|.+|.
T Consensus 187 ~~lg~ 191 (435)
T PRK01490 187 LELGS 191 (435)
T ss_pred EEEcC
Confidence 55553
No 78
>PF05184 SapB_1: Saposin-like type B, region 1; InterPro: IPR007856 Synonym(s):cerebroside sulphate activator, CSAct Saposin B is a small non-enzymatic glycoprotein required for the breakdown of cerebroside sulphates (sulphatides) in lysosomes. Saposin B contains three intramolecular disulphide bridges, exists as a dimer and is remarkably heat, protease, and pH stable. The crystal structure of human saposin B reveals an unusual shell-like dimer consisting of a monolayer of alpha-helices enclosing a large hydrophobic cavity. Although the secondary structure of saposin B is similar to that of the known monomeric members of the saposin-like superfamily, the helices are repacked into a different tertiary arrangement to form the homodimer. A comparison of the two forms of the saposin B dimer suggests that extraction of target lipids from membranes involves a conformational change that facilitates access to the inner cavity [].; GO: 0006629 lipid metabolic process; PDB: 1N69_C 1QDM_C 4DDJ_A 2DOB_A 1OF9_A 2Z9A_A 1M12_A 2GTG_A 1SN6_A 2QYP_B ....
Probab=37.21 E-value=80 Score=19.86 Aligned_cols=34 Identities=26% Similarity=0.433 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHhHhccCCccHHHHHHHHHHHHH
Q 017786 135 ACELAARVLDAAGKLVRPSVTTNEIDKAVHQMII 168 (366)
Q Consensus 135 A~~ia~~~l~~~~~~i~pGvTe~ei~~~~~~~~~ 168 (366)
.|.+...++..+.+.++...|+.+|...+++.+.
T Consensus 3 ~C~~C~~~v~~i~~~l~~~~t~~~I~~~l~~~C~ 36 (39)
T PF05184_consen 3 ECDICKFVVKEIEKLLKNNKTEEEIKKALEKACN 36 (39)
T ss_dssp HHHHHHHHHHHHHHHHHSTCHHHHHHHHHHHHHT
T ss_pred cchHHHHHHHHHHHHHHcCccHHHHHHHHHHHHh
Confidence 4677888899999999999999999999988763
No 79
>TIGR00115 tig trigger factor. Trigger factor is a ribosome-associated molecular chaperone and is the first chaperone to interact with nascent polypeptide. Trigger factor can bind at the same time as the signal recognition particle (SRP), but is excluded by the SRP receptor (FtsY). The central domain of trigger factor has peptidyl-prolyl cis/trans isomerase activity. This protein is found in a single copy in virtually every bacterial genome.
Probab=36.52 E-value=85 Score=31.33 Aligned_cols=57 Identities=19% Similarity=0.397 Sum_probs=39.6
Q ss_pred CccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCeeeecCCCCcccCCC-CCCCCCCCCEEEEEeccccCcEEecee----e
Q 017786 153 SVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIP-DSRQLQDGDIINIDVTVYLNGYHGDTS----K 227 (366)
Q Consensus 153 GvTe~ei~~~~~~~~~~~G~~ps~~~~~~fp~~v~~g~n~~~~h~~p-~~~~l~~GDiv~iD~g~~~~GY~~D~s----R 227 (366)
-+|+.+|+..+......++-+- + .++.++.||.|.+|+....+|-..+.+ .
T Consensus 119 ~vtde~vd~~i~~l~~~~a~~~------------------------~~~~~~~~~gD~V~v~~~~~~dg~~~~~~~~~~~ 174 (408)
T TIGR00115 119 EVTDEDVDEELEKLREQNATLV------------------------PVERRAAEKGDRVTIDFEGFIDGEAFEGGKAENF 174 (408)
T ss_pred CCCHHHHHHHHHHHHHhCCccc------------------------cccccccCCCCEEEEEEEEEECCEECcCCCCCCe
Confidence 3688999999988887766431 1 235789999999999877676543332 3
Q ss_pred EEEccC
Q 017786 228 TFLCGN 233 (366)
Q Consensus 228 T~~vG~ 233 (366)
+|.+|.
T Consensus 175 ~~~lg~ 180 (408)
T TIGR00115 175 SLELGS 180 (408)
T ss_pred EEEECC
Confidence 555653
No 80
>cd04938 TGS_Obg-like TGS_Obg-like: The C-terminal TGS domain of Obg-like GTPases such as those present in DRG (developmentally regulated GTP-binding protein), and GTP-binding proteins Ygr210 and YchF. The TGS domain (named after the ThrRS, GTPase, and SpoT proteins where it occurs) is a small domain of about 50 amino acid residues with a predominantly beta-sheet structure. There is no direct information on the function of the TGS domain, but its presence in two types of regulatory proteins (the GTPases and guanosine polyphosphate phosphohydrolases/synthetases) suggests a ligand (most likely nucleotide)-binding, regulatory role.
Probab=33.75 E-value=68 Score=24.12 Aligned_cols=47 Identities=15% Similarity=0.144 Sum_probs=30.8
Q ss_pred ccCCccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCeeeecCCCCcccCCCCCCCCCCCCEEEE
Q 017786 150 VRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINI 212 (366)
Q Consensus 150 i~pGvTe~ei~~~~~~~~~~~G~~ps~~~~~~fp~~v~~g~n~~~~h~~p~~~~l~~GDiv~i 212 (366)
++.|.|-.+++..+|..+.+.=.+ .+-.+ ......+..|++||+|.|
T Consensus 28 l~~g~tv~d~a~~IH~d~~~~F~~-----------A~v~~-----~~~vg~d~~l~d~DVv~i 74 (76)
T cd04938 28 VKKGTTVGDVARKIHGDLEKGFIE-----------AVGGR-----RRLEGKDVILGKNDILKF 74 (76)
T ss_pred EcCCCCHHHHHHHHhHHHHhccEE-----------EEEcc-----CEEECCCEEecCCCEEEE
Confidence 466889999999999877653222 11112 112235778999999987
No 81
>PF03477 ATP-cone: ATP cone domain; InterPro: IPR005144 The ATP-cone is an evolutionarily mobile, ATP-binding regulatory domain which is found in a variety of proteins including ribonucleotide reductases, phosphoglycerate kinases and transcriptional regulators []. In ribonucleotide reductase protein R1 (P28903 from SWISSPROT) from Escherichia coli this domain is located at the N terminus, and is composed mostly of helices []. It forms part of the allosteric effector region and contains the general allosteric activity site in a cleft located at the tip of the N-terminal region []. This site binds either ATP (activating) or dATP (inhibitory), with the base bound in a hydrophobic pocket and the phosphates bound to basic residues. Substrate binding to this site is thought to affect enzyme activity by altering the relative positions of the two subunits of ribonucleotide reductase.; PDB: 2XO4_A 1RLR_A 7R1R_B 5R1R_A 2XO5_B 2XAW_A 2R1R_C 2XAY_B 2X0X_C 2XAZ_A ....
Probab=28.43 E-value=45 Score=25.40 Aligned_cols=36 Identities=25% Similarity=0.355 Sum_probs=23.2
Q ss_pred HHHHHHHHHHhHhccCCccHHHHHHHHHHHHHHhCC
Q 017786 137 ELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGA 172 (366)
Q Consensus 137 ~ia~~~l~~~~~~i~pGvTe~ei~~~~~~~~~~~G~ 172 (366)
+|+.++...+.+..+.++|+.||...+...+.+.|.
T Consensus 39 ~i~~~V~~~l~~~~~~~is~~eI~~~v~~~L~~~~~ 74 (90)
T PF03477_consen 39 EIASEVENKLYDSGKEEISTEEIQDIVENALMEEGF 74 (90)
T ss_dssp HHHHHHHTC-ST----TEEHHHHHHHHHHHHHTSTT
T ss_pred HHHHHHHHHHHhccCCCeeHHHHHHHHHHHHHcCCh
Confidence 344444444444444499999999999999997764
No 82
>PF12631 GTPase_Cys_C: Catalytic cysteine-containing C-terminus of GTPase, MnmE; PDB: 1XZQ_A 1XZP_A 2GJ8_D 3GEH_A 3GEI_B 3GEE_A.
Probab=28.33 E-value=1.4e+02 Score=22.03 Aligned_cols=43 Identities=16% Similarity=0.310 Sum_probs=32.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHc
Q 017786 234 VSDGLKRLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKY 276 (366)
Q Consensus 234 ~~~e~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~ai~~~~~~~ 276 (366)
.+..++.+++.+.+.++.+++.++.|.+..=+...++...+..
T Consensus 10 ~~~Rq~~~L~~a~~~l~~a~~~l~~~~~~dl~a~~L~~A~~~L 52 (73)
T PF12631_consen 10 TNARQRQLLEQALEHLEDALEALENGLPLDLVAEDLREALESL 52 (73)
T ss_dssp -SHHHHHHHHHHHHHHHHHHHHHHTT--HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHH
Confidence 4788999999999999999999999987766665555555443
No 83
>PF09506 Salt_tol_Pase: Glucosylglycerol-phosphate phosphatase (Salt_tol_Pase); InterPro: IPR012765 Proteins in this family are glucosylglycerol-phosphate phosphatases, with the gene symbol stpA (Salt Tolerance Protein A). A motif characteristic of acid phosphatases is found, but otherwise this family shows little sequence similarity to other phosphatases. This enzyme acts on the glucosylglycerol phosphate, product of glucosylglycerol phosphate synthase and immediate precursor of the osmoprotectant glucosylglycerol.
Probab=28.31 E-value=1.9e+02 Score=28.42 Aligned_cols=52 Identities=17% Similarity=0.278 Sum_probs=47.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHhHhccCCccHHHHHHHHHHHHHHhCCCCC
Q 017786 124 HDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPS 175 (366)
Q Consensus 124 Ks~~EI~~~R~A~~ia~~~l~~~~~~i~pGvTe~ei~~~~~~~~~~~G~~ps 175 (366)
-|+.||+.+-++-......+......+-|..++.|+...++..+.+.-+-|+
T Consensus 97 Vs~~El~FLa~vP~~m~~~L~~~l~~~~p~l~~~~i~~~~~~sVldt~~SPT 148 (381)
T PF09506_consen 97 VSDAELAFLAAVPERMEALLKEFLPAILPELSQEEIEKLIEASVLDTRVSPT 148 (381)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhhCcccCHHHHHHHHHHHHhcCCCCCc
Confidence 3788999999999999999999999999999999999999999988876664
No 84
>PF10415 FumaraseC_C: Fumarase C C-terminus; InterPro: IPR018951 Fumarase C catalyses the stereo-specific interconversion of fumarate to L-malate as part of the Krebs cycle. The full-length protein forms a tetramer with visible globular shape. FumaraseC_C is the C-terminal 65 residues referred to as domain 3. The core of the molecule consists of a bundle of 20 alpha-helices from the five-helix bundle of domain 2. The projections from the core of the tetramer are generated from domains 1 and 3 of each subunit []. This entry does not appear to be part of either the active site or the activation site but is helical in structure forming a little bundle. ; GO: 0016829 lyase activity, 0006099 tricarboxylic acid cycle; PDB: 3RRP_A 3OCE_D 3OCF_D 3E04_B 3GTD_A 3R6V_F 3R6Q_F 1J3U_B 1FUR_A 1YFE_A ....
Probab=27.97 E-value=81 Score=22.19 Aligned_cols=35 Identities=20% Similarity=0.354 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHHHH---hHh-ccCC-ccHHHHHHHHHH
Q 017786 131 KMRAACELAARVLDAA---GKL-VRPS-VTTNEIDKAVHQ 165 (366)
Q Consensus 131 ~~R~A~~ia~~~l~~~---~~~-i~pG-vTe~ei~~~~~~ 165 (366)
.+.+|++|+.++++.- .+. ++-| +|+.|++.+++-
T Consensus 10 GYe~aa~iAk~A~~~g~svre~v~~~g~lt~ee~d~ll~p 49 (55)
T PF10415_consen 10 GYEKAAEIAKEALAEGRSVREVVLEEGLLTEEELDELLDP 49 (55)
T ss_dssp HHHHHHHHHHHHHHHT--HHHHHHHTTSS-HHHHHHHTSH
T ss_pred ccHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHHHHcCH
Confidence 5788999999998763 333 3456 799999887653
No 85
>TIGR02399 salt_tol_Pase glucosylglycerol 3-phosphatase. Proteins in this family are glucosylglycerol-phosphate phosphatase, with the gene symbol stpA (Salt Tolerance Protein A). A motif characteristic of acid phosphatases is found, but otherwise this family shows little sequence similarity to other phosphatases. This enzyme acts on the glucosylglycerol phosphate, product of glucosylglycerol phosphate synthase and immediate precursor of the osmoprotectant glucosylglycerol.
Probab=27.06 E-value=2e+02 Score=28.35 Aligned_cols=52 Identities=17% Similarity=0.274 Sum_probs=47.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHhHhccCCccHHHHHHHHHHHHHHhCCCCC
Q 017786 124 HDSESIAKMRAACELAARVLDAAGKLVRPSVTTNEIDKAVHQMIIEAGAYPS 175 (366)
Q Consensus 124 Ks~~EI~~~R~A~~ia~~~l~~~~~~i~pGvTe~ei~~~~~~~~~~~G~~ps 175 (366)
-|+.||+.+-++-......+......+-|..++.|+...++..+.+.-+-|+
T Consensus 103 Vs~~El~FLa~vP~~m~~~L~~~l~~~~p~l~~~~i~~~~~~aVldt~~SPT 154 (389)
T TIGR02399 103 VSKEEVDFLAAVPDLMRPSLEQIVKKIFPNLVQEEIQTHASKSVLDTRFSPT 154 (389)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhhCcccCHHHHHHHHHHHHhcCCCCCc
Confidence 3788999999999999999999999999999999999999999988776664
No 86
>PF06135 DUF965: Bacterial protein of unknown function (DUF965); InterPro: IPR009309 This family consists of several hypothetical bacterial proteins. The function of the family is unknown.
Probab=22.11 E-value=90 Score=23.82 Aligned_cols=29 Identities=21% Similarity=0.384 Sum_probs=22.4
Q ss_pred cHHHHHHHHHHHHHHcCCCccCCceeecc
Q 017786 261 SFKKIGKRISEHAEKYGFGVVERFVGHGV 289 (366)
Q Consensus 261 ~~~dI~~ai~~~~~~~G~~~~~~~~GHgI 289 (366)
..+++-+.+.+.+++.||.++...+|+=+
T Consensus 16 ~~~~iL~~Vy~AL~EKGYnPinQivGYll 44 (79)
T PF06135_consen 16 EIREILKQVYAALEEKGYNPINQIVGYLL 44 (79)
T ss_pred hHHHHHHHHHHHHHHcCCChHHHHHhhee
Confidence 45667777778889999999888877644
No 87
>COG0414 PanC Panthothenate synthetase [Coenzyme metabolism]
Probab=20.28 E-value=2.3e+02 Score=27.01 Aligned_cols=58 Identities=17% Similarity=0.159 Sum_probs=47.1
Q ss_pred cCcEEeceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCCcH-HHHHHHHHHHHHHcCCC
Q 017786 218 LNGYHGDTSKTFLCGNVSDGLKRLVKVTEECLEKGIAVCKDGASF-KKIGKRISEHAEKYGFG 279 (366)
Q Consensus 218 ~~GY~~D~sRT~~vG~~~~e~~~l~~~~~ea~~~ai~~~kPG~~~-~dI~~ai~~~~~~~G~~ 279 (366)
-||. +-.||..++ ++++++..-....++.++-+.+..|..- .+|-+++.+.+++.++.
T Consensus 181 ~DGL-A~SSRN~YL---s~eeR~~A~~L~~~L~~~~~~~~~G~~~~~~i~~~~~~~L~~~~~~ 239 (285)
T COG0414 181 EDGL-ALSSRNVYL---SAEERKAAPALYRALTAAAELAAGGERDPAKIIEAARQVLEEAGFV 239 (285)
T ss_pred CCcc-chhhccccC---CHHHHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHhcCCC
Confidence 3444 445677765 8889998899999999999999999866 88999999999987774
Done!