Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>017787
MVGGVQIGALAACVVLFVPMVMAGWHLSRNKMLFFGCSLFITLAVCVHLTPYFPSVSDFA
TSFSSFVVFDHRDSCINLVNQIIWDVKPTHRVVNNTSFTPNYYYEKNWDWLKSRKLDACE
FQKLDKSDASDLLNGSWVVVAGDSQARLLVVSLLSLVLDQERVDSIRGDLFKRHSDYDIV
IDEIGMKLDFIWAPFETNLTDLVIKFKEKRKYPDVLVMGTGLWHMLHVGNASDYGVSLRS
LKSSVVSLLPFSPELGTDGPVTGSVSIRSPHLFWLGMPMLINGMLNTEEKRLKMNDLMWH
AYDRALGDSKLLRQTGGPLVLLDIQSLTWNCGPRCTLDGMHYDAAVYDAAVHIMLNALLI
ESHQRL

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  017787
        (366 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2097710 - symbol:AT3G03210 "AT3G03210" species...  1319  1.2e-134  1


>TAIR|locus:2097710 [details] [associations]
            symbol:AT3G03210 "AT3G03210" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002686 InterPro:IPR026057
            Pfam:PF13839 EMBL:AC012328 UniGene:At.43040 EMBL:BT020433
            IPI:IPI00527795 RefSeq:NP_186971.1 UniGene:At.71858
            ProteinModelPortal:Q9M9N9 PRIDE:Q9M9N9 EnsemblPlants:AT3G03210.1
            GeneID:821222 KEGG:ath:AT3G03210 TAIR:At3g03210 InParanoid:Q9M9N9
            OMA:AAVHVML PhylomeDB:Q9M9N9 ProtClustDB:CLSN2684073
            Genevestigator:Q9M9N9 Uniprot:Q9M9N9
        Length = 368

 Score = 1319 (469.4 bits), Expect = 1.2e-134, P = 1.2e-134
 Identities = 246/371 (66%), Positives = 287/371 (77%)

Query:     1 MVGGVQIGALAACVVLFVPMVMAGWHLSRNKMLFFGCSLFITLAVCVHLTPYFPSVSDFA 60
             M+G + +G LAAC VLFVPM MAGWHLSRNKMLFF  +LFI+LAVCVHLTPYFPSVSD  
Sbjct:     1 MLGAIHLGVLAACFVLFVPMAMAGWHLSRNKMLFFSGALFISLAVCVHLTPYFPSVSDIV 60

Query:    61 TSFSSFVVFDHRDSCINLVNQIIWDVKPT---HRVVNNTSFTPNYYYEKNWDWLKSRKLD 117
              S SS VV+DHR SCIN VNQI+WDVKP      V  N   T   Y+ KNWDW+KSRK+ 
Sbjct:    61 ASVSSVVVYDHRISCINEVNQIVWDVKPVPNPESVRRNNGSTKLDYFVKNWDWMKSRKVL 120

Query:   118 ACEFQKLDKSDASDLLNGSWVVVAGDSQARXXXXXXXXXX--XDQERVDSIRGDLFKRHS 175
             +CEFQKLDK D SDLLNGSWVVVAGDSQAR             D + +DS+RGDLF+RHS
Sbjct:   121 SCEFQKLDKFDVSDLLNGSWVVVAGDSQARFVALSLLNLVLGSDSKAMDSVRGDLFRRHS 180

Query:   176 DYDIVIDEIGMKLDFIWAPFETNLTDLVIKFKEKRKYPDVLVMGTGLWHMLHVGNASDYG 235
             DY IV+ EIGMKLDF+WAP+E +L DLV+ +K+ +KYPDV++MGTGLWHMLHV NASD+G
Sbjct:   181 DYSIVVKEIGMKLDFVWAPYEKDLDDLVVSYKKMKKYPDVVIMGTGLWHMLHVNNASDFG 240

Query:   236 XXXXXXXXXXXXXXPFSPELGTDGPVTGSVSIRSPHLFWLGMPMLINGMLNTEEKRLKMN 295
                           P +P+    G   GSVS RS HLFW+GMP+LINGMLNT+EK+ KM+
Sbjct:   241 FRLRQLSSHVESLVPLTPKEQEGG---GSVSGRSVHLFWIGMPVLINGMLNTDEKKEKMS 297

Query:   296 DLMWHAYDRALGDSKLLRQTGGPLVLLDIQSLTWNCGPRCTLDGMHYDAAVYDAAVHIML 355
             D +WH YDR+LG+SK+LRQ GGPL+LLDIQS TWNCGP+CTLDGMHYD+AVYDAAVH+ML
Sbjct:   298 DTVWHEYDRSLGESKILRQMGGPLILLDIQSFTWNCGPQCTLDGMHYDSAVYDAAVHVML 357

Query:   356 NALLIESHQRL 366
             NALLIESHQ L
Sbjct:   358 NALLIESHQSL 368


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.139   0.447    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      366       341   0.00095  116 3  11 22  0.48    33
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  620 (66 KB)
  Total size of DFA:  266 KB (2139 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  25.74u 0.10s 25.84t   Elapsed:  00:00:02
  Total cpu time:  25.74u 0.10s 25.84t   Elapsed:  00:00:02
  Start:  Tue May 21 02:30:07 2013   End:  Tue May 21 02:30:09 2013

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