BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017789
(366 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3S4E|A Chain A, Crystal Structrue Of A Novel Mitogen-Activated Protein
Kinase Phosphatase, Skrp1
Length = 144
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Query: 106 TVPIRDMESENLLDYLDVCFDFIDR-RRKEGGVLVHCFAGVSRSAAIITAYLMRTEQLSS 164
++ I D+ N+L Y CF+FI+ +RK+G VLVH AGVSR+AAI+ +LM +EQ S
Sbjct: 52 SISILDLPETNILSYFPECFEFIEEAKRKDGVVLVHSNAGVSRAAAIVIGFLMNSEQTSF 111
Query: 165 EGALESLRQSCESVCPNDGFLEQLKMFEE 193
A ++ + S+CPN GF+EQL+ ++E
Sbjct: 112 TSAFSLVKNARPSICPNSGFMEQLRTYQE 140
>pdb|2G6Z|A Chain A, Crystal Structure Of Human Dusp5
pdb|2G6Z|B Chain B, Crystal Structure Of Human Dusp5
pdb|2G6Z|C Chain C, Crystal Structure Of Human Dusp5
Length = 211
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 107 VPIRDMESENLLDYLDVCFDFIDRRRKEGG-VLVHCFAGVSRSAAIITAYLMRTEQLSSE 165
+P+ D + ++ + DFID R++GG VLVH AG+SRS I AYLM+T+Q +
Sbjct: 55 IPVEDSHTADISSHFQEAIDFIDCVREKGGKVLVHSEAGISRSPTICMAYLMKTKQFRLK 114
Query: 166 GALESLRQSCESVCPNDGFLEQLKMFE 192
A + ++Q V PN GF+ QL +E
Sbjct: 115 EAFDYIKQRRSMVSPNFGFMGQLLQYE 141
>pdb|1VHR|A Chain A, Human Vh1-Related Dual-Specificity Phosphatase
pdb|1VHR|B Chain B, Human Vh1-Related Dual-Specificity Phosphatase
Length = 184
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 54/93 (58%), Gaps = 3/93 (3%)
Query: 98 KDLKLVRMTVPIRDMESENLLDYLDVCFDFIDRR--RKEGGVLVHCFAGVSRSAAIITAY 155
KD + + + D + NL Y + DFID+ +K G VLVHC G SRS ++ AY
Sbjct: 78 KDSGITYLGIKANDTQEFNLSAYFERAADFIDQALAQKNGRVLVHCREGYSRSPTLVIAY 137
Query: 156 LMRTEQLSSEGALESLRQSCESVCPNDGFLEQL 188
LM +++ + AL +RQ+ E + PNDGFL QL
Sbjct: 138 LMMRQKMDVKSALSIVRQNRE-IGPNDGFLAQL 169
>pdb|3F81|A Chain A, Interaction Of Vhr With Sa3
pdb|3F81|B Chain B, Interaction Of Vhr With Sa3
Length = 183
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 54/93 (58%), Gaps = 3/93 (3%)
Query: 98 KDLKLVRMTVPIRDMESENLLDYLDVCFDFIDRR--RKEGGVLVHCFAGVSRSAAIITAY 155
KD + + + D + NL Y + DFID+ +K G VLVHC G SRS ++ AY
Sbjct: 77 KDSGITYLGIKANDTQEFNLSAYFERAADFIDQALAQKNGRVLVHCREGYSRSPTLVIAY 136
Query: 156 LMRTEQLSSEGALESLRQSCESVCPNDGFLEQL 188
LM +++ + AL +RQ+ E + PNDGFL QL
Sbjct: 137 LMMRQKMDVKSALSIVRQNRE-IGPNDGFLAQL 168
>pdb|3LJ8|A Chain A, Crystal Structure Of Mkp-4
Length = 146
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 107 VPIRDMESENLLDYLDVCFDFIDRRRKEG-GVLVHCFAGVSRSAAIITAYLMRTEQLSSE 165
+PI D S+NL + +FID + GVLVHC AGVSRS + AYLM+ LS
Sbjct: 54 IPISDHWSQNLSRFFPEAIEFIDEALSQNCGVLVHCLAGVSRSVTVTVAYLMQKLHLSLN 113
Query: 166 GALESLRQSCESVCPNDGFLEQLKMFE 192
A + +++ ++ PN F+ QL FE
Sbjct: 114 DAYDLVKRKKSNISPNFNFMGQLLDFE 140
>pdb|1YZ4|A Chain A, Crystal Structure Of Dusp15
pdb|1YZ4|B Chain B, Crystal Structure Of Dusp15
Length = 160
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 73/184 (39%), Gaps = 58/184 (31%)
Query: 9 LFIGNISDAADILQNGSSEITHMLSVLSSASISFFTEWRSSLTIPSKEIKKVYAXXXXXX 68
L++GN DA D+ Q G ++ITH++S+ S
Sbjct: 15 LYLGNFIDAKDLDQLGRNKITHIISIHES------------------------------- 43
Query: 69 XXXXXXXXXXXXRSCLSPTKLLYSLEYAGKDLKLVRMTVPIRDMESENLLDYLDVCFDFI 128
P LL + Y + +P+ D + + C +FI
Sbjct: 44 -----------------PQPLLQDITY---------LRIPVADTPEVPIKKHFKECINFI 77
Query: 129 DRRRKEGG-VLVHCFAGVSRSAAIITAYLMRTEQLSSEGALESLRQSCESVCPNDGFLEQ 187
R GG LVH FAG+SRS I+TAY+M L LE+++ + PN GF +Q
Sbjct: 78 HCCRLNGGNCLVHSFAGISRSTTIVTAYVMTVTGLGWRDVLEAIKATRPIANPNPGFRQQ 137
Query: 188 LKMF 191
L+ F
Sbjct: 138 LEEF 141
>pdb|1MKP|A Chain A, Crystal Structure Of Pyst1 (Mkp3)
Length = 144
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 107 VPIRDMESENLLDYLDVCFDFIDRRR-KEGGVLVHCFAGVSRSAAIITAYLMRTEQLSSE 165
+PI D S+NL + FID R K GVLVH AG+SRS + AYLM+ LS
Sbjct: 55 IPISDHWSQNLSQFFPEAISFIDEARGKNCGVLVHSLAGISRSVTVTVAYLMQKLNLSMN 114
Query: 166 GALESLRQSCESVCPNDGFLEQLKMFE 192
A + ++ ++ PN F+ QL FE
Sbjct: 115 DAYDIVKMKKSNISPNFNFMGQLLDFE 141
>pdb|1J4X|A Chain A, Human Vh1-Related Dual-Specificity Phosphatase C124s
Mutant- Peptide Complex
Length = 184
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 98 KDLKLVRMTVPIRDMESENLLDYLDVCFDFIDRR--RKEGGVLVHCFAGVSRSAAIITAY 155
KD + + + D + NL Y + DFID+ +K G VLVH G SRS ++ AY
Sbjct: 78 KDSGITYLGIKANDTQEFNLSAYFERAADFIDQALAQKNGRVLVHSREGYSRSPTLVIAY 137
Query: 156 LMRTEQLSSEGALESLRQSCESVCPNDGFLEQL 188
LM +++ + AL +RQ+ E + PNDGFL QL
Sbjct: 138 LMMRQKMDVKSALSIVRQNRE-IGPNDGFLAQL 169
>pdb|2ESB|A Chain A, Crystal Structure Of Human Dusp18
Length = 188
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 52/97 (53%), Gaps = 3/97 (3%)
Query: 105 MTVPIRDMESENLLDYLDVCFDFIDR-RRKEGGVLVHCFAGVSRSAAIITAYLMRTEQLS 163
M VP+ D + L D+ D D I K+G L+HC AGVSRSAA+ AYLM+ +S
Sbjct: 67 MQVPVADSPNSRLCDFFDPIADHIHSVEMKQGRTLLHCAAGVSRSAALCLAYLMKYHAMS 126
Query: 164 SEGALESLRQSCESVC-PNDGFLEQLKMFEEMGFKVN 199
A + +SC + PN GF EQL +E F N
Sbjct: 127 LLDA-HTWTKSCRPIIRPNSGFWEQLIHYEFQLFGKN 162
>pdb|2HXP|A Chain A, Crystal Structure Of The Human Phosphatase (Dusp9)
Length = 155
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 107 VPIRDMESENLLDYLDVCFDFIDRRRKEG-GVLVHCFAGVSRSAAIITAYLMRTEQLSSE 165
+PI D S+NL + +FID + GVLVH AGVSRS + AYLM+ LS
Sbjct: 57 IPISDHWSQNLSRFFPEAIEFIDEALSQNCGVLVHSLAGVSRSVTVTVAYLMQKLHLSLN 116
Query: 166 GALESLRQSCESVCPNDGFLEQLKMFE 192
A + +++ ++ PN F+ QL FE
Sbjct: 117 DAYDLVKRKKSNISPNFNFMGQLLDFE 143
>pdb|1WRM|A Chain A, Crystal Structure Of Jsp-1
Length = 165
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Query: 105 MTVPIRDMESENLLDYLDVCFDFIDRRRKEG-GVLVHCFAGVSRSAAIITAYLMRTEQLS 163
+ +P D S+NL + FI R G LVHC AGVSRS ++ AY+M
Sbjct: 53 LCIPAADSPSQNLTRHFKESIKFIHECRLRGESCLVHCLAGVSRSVTLVIAYIMTVTDFG 112
Query: 164 SEGALESLRQSCESVCPNDGFLEQLKMFEE 193
E AL ++R PN GF QL+ FE+
Sbjct: 113 WEDALHTVRAGRSCANPNVGFQRQLQEFEK 142
>pdb|2R0B|A Chain A, Crystal Structure Of Human Tyrosine Phosphatase-like
Serine/threonine/tyrosine-interacting Protein
Length = 154
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Query: 105 MTVPIRDMESENLLDYLDVCFDFIDRRRKEGG-VLVHCFAGVSRSAAIITAYLMRTEQLS 163
+ + I D EN++ + + +FID + GG VLVH AG+SRSAA + AY+M T +
Sbjct: 60 LVLDIADNPVENIIRFFPMTKEFIDGSLQMGGKVLVHGNAGISRSAAFVIAYIMETFGMK 119
Query: 164 SEGALESLRQSCESVCPNDGFLEQLKMFEEM 194
A +++ + PN GF+ QL+ +E +
Sbjct: 120 YRDAFAYVQERRFCINPNAGFVHQLQEYEAI 150
>pdb|2PQ5|A Chain A, Crystal Structure Of Dual Specificity Protein Phosphatase
13 (Dusp13)
pdb|2PQ5|B Chain B, Crystal Structure Of Dual Specificity Protein Phosphatase
13 (Dusp13)
pdb|2PQ5|C Chain C, Crystal Structure Of Dual Specificity Protein Phosphatase
13 (Dusp13)
pdb|2PQ5|D Chain D, Crystal Structure Of Dual Specificity Protein Phosphatase
13 (Dusp13)
Length = 205
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Query: 134 EGGVLVHCFAGVSRSAAIITAYLMRTEQLSSEGALESLRQSCESVCPNDGFLEQLKMFEE 193
+G VLVHC GVSRSA ++ A+LM E ++ A++++ Q+ ++CPN GFL QL++ +
Sbjct: 131 QGRVLVHCAMGVSRSATLVLAFLMIYENMTLVEAIQTV-QAHRNICPNSGFLRQLQVLDN 189
>pdb|2WGP|A Chain A, Crystal Structure Of Human Dual Specificity Phosphatase 14
pdb|2WGP|B Chain B, Crystal Structure Of Human Dual Specificity Phosphatase 14
Length = 190
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Query: 107 VPIRDMESENLLDYLDVCFDFIDR-RRKEGGVLVHCFAGVSRSAAIITAYLMRTEQLSSE 165
VP+ DM + Y D D I RK G LVHC AGVSRSA + AYLM+ +
Sbjct: 75 VPLADMPHAPIGLYFDTVADKIHSVSRKHGATLVHCAAGVSRSATLCIAYLMKFHNVCLL 134
Query: 166 GALESLRQSCESVCPNDGFLEQLKMFEEMGF 196
A ++ + PN GF QL +E F
Sbjct: 135 EAYNWVKARRPVIRPNVGFWRQLIDYERQLF 165
>pdb|2GWO|A Chain A, Crystal Structure Of Tmdp
pdb|2GWO|B Chain B, Crystal Structure Of Tmdp
pdb|2GWO|C Chain C, Crystal Structure Of Tmdp
pdb|2GWO|D Chain D, Crystal Structure Of Tmdp
Length = 198
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Query: 134 EGGVLVHCFAGVSRSAAIITAYLMRTEQLSSEGALESLRQSCESVCPNDGFLEQLKMFEE 193
+G VLVHC GVSRSA ++ A+LM E ++ A++++ Q+ ++CPN GFL QL++ +
Sbjct: 131 QGRVLVHCAMGVSRSATLVLAFLMICENMTLVEAIQTV-QAHRNICPNSGFLRQLQVLDN 189
>pdb|1M3G|A Chain A, Solution Structure Of The Catalytic Domain Of Mapk
Phosphatase Pac-1: Insights Into Substrate-Induced
Enzymatic Activation
Length = 145
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 106 TVPIRDMESENLLDYLDVCFDFIDRRRKEGG-VLVHCFAGVSRSAAIITAYLMRTEQLSS 164
++P+ D + + + FID + GG VLVH AG+SRSA I AYLM++ ++
Sbjct: 52 SIPVEDNQMVEISAWFQEAIGFIDWVKNSGGRVLVHSQAGISRSATICLAYLMQSRRVRL 111
Query: 165 EGALESLRQSCESVCPNDGFLEQLKMFE 192
+ A + ++Q + PN F+ QL FE
Sbjct: 112 DEAFDFVKQRRGVISPNFSFMGQLLQFE 139
>pdb|2HCM|A Chain A, Crystal Structure Of Mouse Putative Dual Specificity
Phosphatase Complexed With Zinc Tungstate, New York
Structural Genomics Consortium
Length = 164
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Query: 102 LVRMTVPIRDMESENLLDYLD-VCFDFIDRRRKEGGVLVHCFAGVSRSAAIITAYLMRTE 160
+ + VP+ D +E+LL +L+ C R G LV+C G SRSAA+ TAYLMR
Sbjct: 56 VAELRVPVFDDPAEDLLTHLEPTCAAMEAAVRDGGSCLVYCKNGRSRSAAVCTAYLMRHR 115
Query: 161 QLSSEGALESLRQSCESVCPNDGFLEQLKMFEE 193
S + A + ++ + PN GF QL+ +E+
Sbjct: 116 GHSLDRAFQMVKSARPVAEPNLGFWAQLQKYEQ 148
>pdb|1ZZW|A Chain A, Crystal Structure Of Catalytic Domain Of Human Map Kinase
Phosphatase 5
pdb|1ZZW|B Chain B, Crystal Structure Of Catalytic Domain Of Human Map Kinase
Phosphatase 5
Length = 149
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
Query: 107 VPIRDMESENLLDYLDVCFDFIDRRRKEG-GVLVHCFAGVSRSAAIITAYLMRTEQLSSE 165
+P D +NL Y + F+FI+ + G G+L+HC AGVSRSA I+ AYLM+ +++
Sbjct: 55 LPATDSNKQNLRQYFEEAFEFIEEAHQCGKGLLIHCQAGVSRSATIVIAYLMKHTRMTMT 114
Query: 166 GALESLRQSCESVCPNDGFLEQLKMFEE 193
A + ++ + PN F+ QL FEE
Sbjct: 115 DAYKFVKGKRPIISPNLNFMGQLLEFEE 142
>pdb|2OUD|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mkp5
Length = 177
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
Query: 107 VPIRDMESENLLDYLDVCFDFIDRRRKEG-GVLVHCFAGVSRSAAIITAYLMRTEQLSSE 165
+P D +NL Y + F+FI+ + G G+L+HC AGVSRSA I+ AYLM+ +++
Sbjct: 59 LPATDSNKQNLRQYFEEAFEFIEEAHQCGKGLLIHCQAGVSRSATIVIAYLMKHTRMTMT 118
Query: 166 GALESLRQSCESVCPNDGFLEQLKMFEE 193
A + ++ + PN F+ QL FEE
Sbjct: 119 DAYKFVKGKRPIISPNLNFMGQLLEFEE 146
>pdb|3EZZ|A Chain A, Crystal Structure Of Human Mkp-2
pdb|3EZZ|B Chain B, Crystal Structure Of Human Mkp-2
pdb|3EZZ|C Chain C, Crystal Structure Of Human Mkp-2
pdb|3EZZ|D Chain D, Crystal Structure Of Human Mkp-2
pdb|3EZZ|E Chain E, Crystal Structure Of Human Mkp-2
pdb|3EZZ|F Chain F, Crystal Structure Of Human Mkp-2
Length = 144
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 107 VPIRDMESENLLDYLDVCFDFIDRRRK-EGGVLVHCFAGVSRSAAIITAYLMRTEQLSSE 165
+P+ D ++ + ++ID + G VLVH AG+SRSA I AYLM +++ E
Sbjct: 53 IPVEDNHKADISSWFMEAIEYIDAVKDCRGRVLVHSQAGISRSATICLAYLMMKKRVRLE 112
Query: 166 GALESLRQSCESVCPNDGFLEQLKMFE 192
A E ++Q + PN F+ QL FE
Sbjct: 113 EAFEFVKQRRSIISPNFSFMGQLLQFE 139
>pdb|2E0T|A Chain A, Crystal Structure Of Catalytic Domain Of Dual Specificity
Phosphatase 26, Ms0830 From Homo Sapiens
Length = 151
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Query: 105 MTVPIRDMESENLLDYLDVCFDFIDRRRKE--GGVLVHCFAGVSRSAAIITAYLMRTEQL 162
+ V D + ++ + DFI R + G +LVHC GVSRSA ++ AYLM L
Sbjct: 54 LGVEAHDSPAFDMSIHFQTAADFIHRALSQPGGKILVHCAVGVSRSATLVLAYLMLYHHL 113
Query: 163 SSEGALESLRQSCESVCPNDGFLEQL 188
+ A++ ++ + PN GFL QL
Sbjct: 114 TLVEAIKKVKDH-RGIIPNRGFLRQL 138
>pdb|2NT2|A Chain A, Crystal Structure Of Slingshot Phosphatase 2
pdb|2NT2|B Chain B, Crystal Structure Of Slingshot Phosphatase 2
pdb|2NT2|C Chain C, Crystal Structure Of Slingshot Phosphatase 2
Length = 145
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 106 TVPIRDMESENLLDYLDVCFDFIDRRRKEGG-VLVHCFAGVSRSAAIITAYLMRTEQLSS 164
+ + D E+ +LL Y + + FI + +K G LVH GVSRSA+ + AY M+ +
Sbjct: 52 NIRVYDEEATDLLAYWNDTYKFISKAKKHGSKCLVHSKMGVSRSASTVIAYAMKEYGWNL 111
Query: 165 EGALESLRQSCESVCPNDGFLEQLKMFE 192
+ A + +++ PN F+ QL+ ++
Sbjct: 112 DRAYDYVKERRTVTKPNPSFMRQLEEYQ 139
>pdb|4HRF|A Chain A, Atomic Structure Of Dusp26
pdb|4HRF|B Chain B, Atomic Structure Of Dusp26
pdb|4HRF|C Chain C, Atomic Structure Of Dusp26
pdb|4HRF|D Chain D, Atomic Structure Of Dusp26
Length = 160
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 105 MTVPIRDMESENLLDYLDVCFDFIDRRRKE--GGVLVHCFAGVSRSAAIITAYLMRTEQL 162
+ V D + ++ + DFI R + G +LVH GVSRSA ++ AYLM L
Sbjct: 55 LGVEAHDSPAFDMSIHFQTAADFIHRALSQPGGKILVHSAVGVSRSATLVLAYLMLYHHL 114
Query: 163 SSEGALESLRQSCESVCPNDGFLEQL 188
+ A++ ++ + PN GFL QL
Sbjct: 115 TLVEAIKKVKDH-RGIIPNRGFLRQL 139
>pdb|2Y96|A Chain A, Structure Of Human Dual-Specificity Phosphatase 27
pdb|2Y96|B Chain B, Structure Of Human Dual-Specificity Phosphatase 27
Length = 219
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 53/98 (54%), Gaps = 3/98 (3%)
Query: 98 KDLKLVRMTVPIRDMESENLLDYLDVCFDFIDRRRKE--GGVLVHCFAGVSRSAAIITAY 155
+D+ + V D+ + +L + FIDR + +LVHC G SRSA ++ AY
Sbjct: 101 RDMDIQYHGVEADDLPTFDLSVFFYPAAAFIDRALSDDHSKILVHCVMGRSRSATLVLAY 160
Query: 156 LMRTEQLSSEGALESLRQSCESVCPNDGFLEQLKMFEE 193
LM + ++ A++ + ++ V PN GFL+QL+ ++
Sbjct: 161 LMIHKDMTLVDAIQQVAKN-RCVLPNRGFLKQLRELDK 197
>pdb|2J16|B Chain B, Apo & Sulphate Bound Forms Of Sdp-1
Length = 182
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 35/60 (58%)
Query: 133 KEGGVLVHCFAGVSRSAAIITAYLMRTEQLSSEGALESLRQSCESVCPNDGFLEQLKMFE 192
K +L+HC G+SRSA +I AY+M+ LS + + L+ + + P+ G + QL +E
Sbjct: 116 KREKILIHCQCGLSRSATLIIAYIMKYHNLSLRHSYDLLKSRADKINPSIGLIFQLMEWE 175
>pdb|3EMU|A Chain A, Crystal Structure Of A Leucine Rich Repeat And Phosphatase
Domain Containing Protein From Entamoeba Histolytica
Length = 161
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 113 ESENLLDYLDVCFDFIDR--RRKEGGVLVHCFAGVSRSAAIITAYLMRTEQLSSEGALES 170
E L D + FI R +RKEG VL+ GV+++ AI+ A+LM ++LS A
Sbjct: 65 EGHQLYDSIPNAIKFIIRSIQRKEG-VLIISGTGVNKAPAIVIAFLMYYQRLSFINAFNK 123
Query: 171 LRQSCESVCPNDGFLEQLKMFEEMGFKVN 199
++ + GF+ QLK+FE+ K+N
Sbjct: 124 VQGLYPLIDIESGFILQLKLFEKKLEKMN 152
>pdb|2J17|A Chain A, Ptyr Bound Form Of Sdp-1
pdb|2J17|B Chain B, Ptyr Bound Form Of Sdp-1
Length = 182
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%)
Query: 133 KEGGVLVHCFAGVSRSAAIITAYLMRTEQLSSEGALESLRQSCESVCPNDGFLEQLKMFE 192
K +L+H G+SRSA +I AY+M+ LS + + L+ + + P+ G + QL +E
Sbjct: 116 KREKILIHSQCGLSRSATLIIAYIMKYHNLSLRHSYDLLKSRADKINPSIGLIFQLMEWE 175
>pdb|2J16|A Chain A, Apo & Sulphate Bound Forms Of Sdp-1
Length = 182
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%)
Query: 133 KEGGVLVHCFAGVSRSAAIITAYLMRTEQLSSEGALESLRQSCESVCPNDGFLEQLKMFE 192
K +L+H G+SRSA +I AY+M+ LS + + L+ + + P+ G + QL +E
Sbjct: 116 KREKILIHXQCGLSRSATLIIAYIMKYHNLSLRHSYDLLKSRADKINPSIGLIFQLMEWE 175
>pdb|3RGO|A Chain A, Crystal Structure Of Ptpmt1
Length = 157
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%)
Query: 137 VLVHCFAGVSRSAAIITAYLMRTEQLSSEGALESLRQSCESVCPNDGFLEQLKMFEE 193
V VHC AG SRSA ++ AYL++ S E A+E++ + + LE LK F +
Sbjct: 92 VYVHCKAGRSRSATMVAAYLIQVHNWSPEEAIEAIAKIRSHISIRPSQLEVLKEFHK 148
>pdb|2P4D|A Chain A, Structure-Assisted Discovery Of Variola Major H1
Phosphatase Inhibitors
Length = 172
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 107 VPIRDMESENLLDYLDVCFDFIDR-RRKEGGVLVHCFAGVSRSAAIITAYLMRTEQLSS 164
+P+ D + ++ Y D F+ + ++ VLVHC AGV+RS A I AYL + SS
Sbjct: 76 IPLVDDTTTDISKYFDDVTAFLSKCDQRNEPVLVHCVAGVNRSGAXILAYLXSKNKESS 134
>pdb|2I6I|A Chain A, Crystal Structures Of The Archaeal Sulfolobus Ptp-Fold
Phosphatase
pdb|2I6J|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Phosphate Ion
pdb|2I6M|A Chain A, Crystal Structure Of The Complexes Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Tungstate
pdb|3RO1|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Terpyridine
Platinum(Ii)
Length = 161
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 24/37 (64%)
Query: 136 GVLVHCFAGVSRSAAIITAYLMRTEQLSSEGALESLR 172
G LVHC G+ R+ I+ +YL+ TE L E A++ +R
Sbjct: 91 GNLVHCVGGIGRTGTILASYLILTEGLEVESAIDEVR 127
>pdb|2Q05|A Chain A, Crystal Structure Of TyrSER PROTEIN PHOSPHATASE FROM
VACCINIA VIRUS Wr
pdb|2Q05|B Chain B, Crystal Structure Of TyrSER PROTEIN PHOSPHATASE FROM
VACCINIA VIRUS Wr
pdb|2Q05|C Chain C, Crystal Structure Of TyrSER PROTEIN PHOSPHATASE FROM
VACCINIA VIRUS Wr
pdb|2Q05|D Chain D, Crystal Structure Of TyrSER PROTEIN PHOSPHATASE FROM
VACCINIA VIRUS Wr
Length = 195
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 105 MTVPIRDMESENLLDYLDVCFDFIDR-RRKEGGVLVHCFAGVSRSAAIITAYL 156
+ +P+ D + ++ Y D F+ + ++ VLVHC AGV+RS A I AYL
Sbjct: 95 IHIPLVDDTTTDISKYFDDVTAFLSKCDQRNEPVLVHCAAGVNRSGAXILAYL 147
>pdb|2RF6|A Chain A, Crystal Structure Of The Vaccinia Virus Dual-Specificity
Phosphatase Vh1
pdb|3CM3|A Chain A, High Resolution Crystal Structure Of The Vaccinia Virus
Dual-Specificity Phosphatase Vh1
Length = 176
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 107 VPIRDMESENLLDYLDVCFDFIDR-RRKEGGVLVHCFAGVSRSAAIITAYLM 157
+P+ D + ++ Y D F+ + ++ VLVH AGV+RS A+I AYLM
Sbjct: 80 IPLVDDTTTDISKYFDDVTAFLSKCDQRNEPVLVHSAAGVNRSGAMILAYLM 131
>pdb|3RGQ|A Chain A, Crystal Structure Of Ptpmt1 In Complex With Pi(5)p
Length = 156
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%)
Query: 137 VLVHCFAGVSRSAAIITAYLMRTEQLSSEGALESLRQSCESVCPNDGFLEQLKMFEE 193
V VH AG SRSA ++ AYL++ S E A+E++ + + LE LK F +
Sbjct: 93 VYVHSKAGRSRSATMVAAYLIQVHNWSPEEAIEAIAKIRSHISIRPSQLEVLKEFHK 149
>pdb|1OHC|A Chain A, Structure Of The Proline Directed Phosphatase Cdc14
pdb|1OHD|A Chain A, Structure Of Cdc14 In Complex With Tungstate
Length = 348
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 6/54 (11%)
Query: 119 DYLDVCFDFIDRRRKEGGVLVHCFAGVSRSAAIITAYLMRTEQLSSEGALESLR 172
++LD+C EG + VHC AG+ R+ +I Y+M+ ++++ + +R
Sbjct: 260 EFLDIC------ENAEGAIAVHCKAGLGRTGTLIACYIMKHYRMTAAETIAWVR 307
>pdb|2DXP|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Phosphopeptides
A-(P)y-R
pdb|2I6O|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-fold Phosphatase With Phosphopeptides
N-g-(p)y-k-n
pdb|2I6P|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-fold Phosphatase With Pnpp
Length = 161
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 23/37 (62%)
Query: 136 GVLVHCFAGVSRSAAIITAYLMRTEQLSSEGALESLR 172
G LVH G+ R+ I+ +YL+ TE L E A++ +R
Sbjct: 91 GNLVHSVGGIGRTGTILASYLILTEGLEVESAIDEVR 127
>pdb|1JLN|A Chain A, Crystal Structure Of The Catalytic Domain Of Protein
Tyrosine Phosphatase Ptp-SlBR7
Length = 297
Score = 34.7 bits (78), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 135 GGVLVHCFAGVSRSAAIITAYLMRTEQLSSEGALESLRQSCESVCPNDGFLEQLKMFE 192
G V+VHC AG+ R+ I A + +QL EG +++L C+ G ++ + +E
Sbjct: 223 GPVVVHCSAGIGRTGCFI-ATSIGCQQLKEEGVVDALSIVCQLRVDRGGMVQTSEQYE 279
>pdb|2A8B|A Chain A, Crystal Structure Of The Catalytic Domain Of Human
Tyrosine Phosphatase Receptor, Type R
Length = 283
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 135 GGVLVHCFAGVSRSAAIITAYLMRTEQLSSEGALESLRQSCESVCPNDGFLEQLKMFE 192
G V+VHC AG+ R+ I A + +QL EG +++L C+ G ++ + +E
Sbjct: 210 GPVVVHCSAGIGRTGCFI-ATSIGCQQLKEEGVVDALSIVCQLRMDRGGMVQTSEQYE 266
>pdb|2AHS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human
Tyrosine Receptor Phosphatase Beta
pdb|2AHS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human
Tyrosine Receptor Phosphatase Beta
Length = 295
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 7/65 (10%)
Query: 114 SENLLDYLDVCFDFIDRRRKEGGVLVHCFAGVSRSAAIITAYLMRTEQLSSE------GA 167
+++L+ ++ D+I+R G +VHC AGV R+ I A +QL S+ GA
Sbjct: 201 TQSLIQFVRTVRDYINRSPGAGPTVVHCSAGVGRTGTFI-ALDRILQQLDSKDSVDIYGA 259
Query: 168 LESLR 172
+ LR
Sbjct: 260 VHDLR 264
>pdb|2H02|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2H02|B Chain B, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2H04|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2I3R|A Chain A, Engineered Catalytic Domain Of Protein Tyrosine
Phosphatase Hptpbeta
pdb|2I3R|B Chain B, Engineered Catalytic Domain Of Protein Tyrosine
Phosphatase Hptpbeta
pdb|2I3U|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2I4E|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2I4E|B Chain B, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2I4G|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With A Sulfamic Acid
(Soaking Experiment)
pdb|2I4H|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain Co-Crystallized With A Sulfamic Acid
Inhibitor
pdb|2I5X|A Chain A, Engineering The Ptpbeta Catalytic Domain With Improved
Crystallization Properties
pdb|2I5X|B Chain B, Engineering The Ptpbeta Catalytic Domain With Improved
Crystallization Properties
Length = 313
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 7/65 (10%)
Query: 114 SENLLDYLDVCFDFIDRRRKEGGVLVHCFAGVSRSAAIITAYLMRTEQLSSE------GA 167
+++L+ ++ D+I+R G +VHC AGV R+ I A +QL S+ GA
Sbjct: 217 TQSLIQFVRTVRDYINRSPGAGPTVVHCSAGVGRTGTFI-ALDRILQQLDSKDSVDIYGA 275
Query: 168 LESLR 172
+ LR
Sbjct: 276 VHDLR 280
>pdb|2H03|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2HC1|A Chain A, Engineered Catalytic Domain Of Protein Tyrosine
Phosphatase Hptpbeta.
pdb|2HC2|A Chain A, Engineered Protein Tyrosine Phosphatase Beta Catalytic
Domain
Length = 291
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 7/65 (10%)
Query: 114 SENLLDYLDVCFDFIDRRRKEGGVLVHCFAGVSRSAAIITAYLMRTEQLSSE------GA 167
+++L+ ++ D+I+R G +VHC AGV R+ I A +QL S+ GA
Sbjct: 198 TQSLIQFVRTVRDYINRSPGAGPTVVHCSAGVGRTGTFI-ALDRILQQLDSKDSVDIYGA 256
Query: 168 LESLR 172
+ LR
Sbjct: 257 VHDLR 261
>pdb|2I75|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase N4
(Ptpn4)
Length = 320
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 119 DYLD-VCFDFIDRRRKEGGVLVHCFAGVSRSAAIIT 153
D+LD VC R KE V+VHC AG+ R+ +IT
Sbjct: 221 DFLDFVCHVRNKRAGKEEPVVVHCSAGIGRTGVLIT 256
>pdb|1OHE|A Chain A, Structure Of Cdc14b Phosphatase With A Peptide Ligand
Length = 348
Score = 32.7 bits (73), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 6/54 (11%)
Query: 119 DYLDVCFDFIDRRRKEGGVLVHCFAGVSRSAAIITAYLMRTEQLSSEGALESLR 172
++LD+C EG + VH AG+ R+ +I Y+M+ ++++ + +R
Sbjct: 260 EFLDIC------ENAEGAIAVHSKAGLGRTGTLIACYIMKHYRMTAAETIAWVR 307
>pdb|1I9S|A Chain A, Crystal Structure Of The Rna Triphosphatase Domain Of
Mouse Mrna Capping Enzyme
Length = 210
Score = 32.3 bits (72), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 114 SENLLDYLDVCFDFIDRRRKEGGVLVHCFAGVSRSAAIITAYLMRTEQLSSEGALESLRQ 173
+EN ++ +C F +R E + VHC G +R+ +I A+L+ S E A+ + Q
Sbjct: 100 TENTETFIRLCERFNERSPPEL-IGVHCTHGFNRTGFLICAFLVEKMDWSIEAAVATFAQ 158
Query: 174 S 174
+
Sbjct: 159 A 159
>pdb|2C46|A Chain A, Crystal Structure Of The Human Rna Guanylyltransferase And
5'-Phosphatase
pdb|2C46|B Chain B, Crystal Structure Of The Human Rna Guanylyltransferase And
5'-Phosphatase
pdb|2C46|C Chain C, Crystal Structure Of The Human Rna Guanylyltransferase And
5'-Phosphatase
pdb|2C46|D Chain D, Crystal Structure Of The Human Rna Guanylyltransferase And
5'-Phosphatase
Length = 241
Score = 32.3 bits (72), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 114 SENLLDYLDVCFDFIDRRRKEGGVLVHCFAGVSRSAAIITAYLMRTEQLSSEGALESLRQ 173
+EN ++ +C F +R E + VHC G +R+ +I A+L+ S E A+ + Q
Sbjct: 122 TENTETFIRLCERFNERNPPEL-IGVHCTHGFNRTGFLICAFLVEKMDWSIEAAVATFAQ 180
Query: 174 S 174
+
Sbjct: 181 A 181
>pdb|1YN9|A Chain A, Crystal Structure Of Baculovirus Rna 5'-Phosphatase
Complexed With Phosphate
pdb|1YN9|B Chain B, Crystal Structure Of Baculovirus Rna 5'-Phosphatase
Complexed With Phosphate
pdb|1YN9|C Chain C, Crystal Structure Of Baculovirus Rna 5'-Phosphatase
Complexed With Phosphate
Length = 169
Score = 32.3 bits (72), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 43/74 (58%), Gaps = 6/74 (8%)
Query: 104 RMTVPIRDMESENLL-DYLDVCFDFIDRRRKEGGVLV--HCFAGVSRSAAIITAYLMRTE 160
++ VP + + E+++ +++D +F + K G+LV HC G++R+ ++ YLM T
Sbjct: 83 KIQVPGQTLPPESIVQEFIDTVKEFTE---KCPGMLVGVHCTHGINRTGYMVCRYLMHTL 139
Query: 161 QLSSEGALESLRQS 174
++ + A++ ++
Sbjct: 140 GIAPQEAIDRFEKA 153
>pdb|2BIJ|A Chain A, Crystal Structure Of The Human Protein Tyrosine
Phosphatase Ptpn5 (step, Striatum Enriched Enriched
Phosphatase)
Length = 305
Score = 32.3 bits (72), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 14/56 (25%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 137 VLVHCFAGVSRSAAIITAYLMRTEQLSSEGALESLRQSCESVCPNDGFLEQLKMFE 192
++VHC AG+ R+ I + +QL EG ++ L+ +C+ G ++ + ++
Sbjct: 234 IIVHCSAGIGRTGCFIATSIC-CQQLRQEGVVDILKTTCQLRQDRGGMIQTCEQYQ 288
>pdb|1LAR|A Chain A, Crystal Structure Of The Tandem Phosphatase Domains Of
Rptp Lar
pdb|1LAR|B Chain B, Crystal Structure Of The Tandem Phosphatase Domains Of
Rptp Lar
Length = 575
Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 115 ENLLDYLDVCFDFIDRRRKEGGVLVHCFAGVSRSAAIITAYLMRTEQLSSEGALESLR 172
E +D++ ++ ++G + VHC AGV R+ IT ++ E++ EG ++ +
Sbjct: 481 EGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIV-LERMRYEGVVDMFQ 537
>pdb|1PA9|A Chain A, Yersinia Protein-Tyrosine Phosphatase Complexed With Pncs
(Yop51,Pasteurella X,Ptpase,Yop51delta162) (Catalytic
Domain, Residues 163-468) Mutant With Cys 235 Replaced
By Arg (C235r)
Length = 284
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Query: 138 LVHCFAGVSRSAAIITAYLM---RTEQLSSEGALESLR 172
++HC AGV R+A +I A M R QLS E + +R
Sbjct: 216 VIHCRAGVGRTAQLIGAMCMNDSRNSQLSVEDMVSQMR 253
>pdb|1XXV|A Chain A, Yersinia Yoph (Residues 163-468) Binds
Phosphonodifluoromethyl-Phe Containing Hexapeptide At
Two Sites
pdb|1XXV|B Chain B, Yersinia Yoph (Residues 163-468) Binds
Phosphonodifluoromethyl-Phe Containing Hexapeptide At
Two Sites
Length = 306
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Query: 138 LVHCFAGVSRSAAIITAYLM---RTEQLSSEGALESLR 172
++HC AGV R+A +I A M R QLS E + +R
Sbjct: 238 VIHCRAGVGRTAQLIGAMCMNDSRNSQLSVEDMVSQMR 275
>pdb|3U96|A Chain A, Crystal Structure Of Yophq357f(Catalytic Domain, Residues
163-468) In Complex With Pncs
pdb|3U96|B Chain B, Crystal Structure Of Yophq357f(Catalytic Domain, Residues
163-468) In Complex With Pncs
Length = 306
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Query: 138 LVHCFAGVSRSAAIITAYLM---RTEQLSSEGALESLR 172
++HC AGV R+A +I A M R QLS E + +R
Sbjct: 238 VIHCRAGVGRTAQLIGAMCMNDSRNSQLSVEDMVSQMR 275
>pdb|1YPT|A Chain A, Crystal Structure Of Yersinia Protein Tyrosine Phosphatase
At 2.5 Angstroms And The Complex With Tungstate
pdb|1YPT|B Chain B, Crystal Structure Of Yersinia Protein Tyrosine Phosphatase
At 2.5 Angstroms And The Complex With Tungstate
pdb|3BLU|A Chain A, Crystal Structure Yoph Complexed With Inhibitor Pvs
pdb|3BLT|A Chain A, Crystal Structures Of Yoph Complexed With Pvsn And Pvs,
Inhibitors Of Yoph Which Co-Valent Bind To Cys Of Active
Site
Length = 305
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Query: 138 LVHCFAGVSRSAAIITAYLM---RTEQLSSEGALESLR 172
++HC AGV R+A +I A M R QLS E + +R
Sbjct: 237 VIHCRAGVGRTAQLIGAMCMNDSRNSQLSVEDMVSQMR 274
>pdb|1QZ0|A Chain A, Crystal Structure Of The Yersinia Pestis Phosphatase Yoph
In Complex With A Phosphotyrosyl Mimetic-Containing
Hexapeptide
pdb|1QZ0|B Chain B, Crystal Structure Of The Yersinia Pestis Phosphatase Yoph
In Complex With A Phosphotyrosyl Mimetic-Containing
Hexapeptide
pdb|2I42|A Chain A, Crystal Structure Of Yersinia Protein Tyrosine Phosphatase
Complexed With Vanadate, A Transition State Analogue
pdb|1YTN|A Chain A, Hydrolase
pdb|1YTW|A Chain A, Yersinia Ptpase Complexed With Tungstate
pdb|2Y2F|A Chain A, Crystal Structure Of Yersinia Pestis Yoph In Complex With
An Aminooxy-Containing Platform Compound For Inhibitor
Design
pdb|2YDU|A Chain A, Crystal Structure Of Yoph In Complex With
3-(1,1-Dioxido-3-Oxoisothiazolidin-5-Yl)benzaldeyde
Length = 306
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Query: 138 LVHCFAGVSRSAAIITAYLM---RTEQLSSEGALESLR 172
++HC AGV R+A +I A M R QLS E + +R
Sbjct: 238 VIHCRAGVGRTAQLIGAMCMNDSRNSQLSVEDMVSQMR 275
>pdb|3F99|A Chain A, W354f Yersinia Enterocolitica Ptpase Apo Form
pdb|3F9A|A Chain A, W354f Yersinia Enterocolitica Ptpase Complexed With
Tungstate
pdb|3F9B|A Chain A, W354f Yersinia Enterocolitica Ptpase Complexed With
Divanadate
Length = 306
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Query: 138 LVHCFAGVSRSAAIITAYLM---RTEQLSSEGALESLR 172
++HC AGV R+A +I A M R QLS E + +R
Sbjct: 238 VIHCRAGVGRTAQLIGAMCMNDSRNSQLSVEDMVSQMR 275
>pdb|3BM8|A Chain A, Crystal Structure Of Yoph Mutant D356a Complexed With
Irreversible Inhibitor Pvsn
Length = 305
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Query: 138 LVHCFAGVSRSAAIITAYLM---RTEQLSSEGALESLR 172
++HC AGV R+A +I A M R QLS E + +R
Sbjct: 237 VIHCRAGVGRTAQLIGAMCMNDSRNSQLSVEDMVSQMR 274
>pdb|2IJR|A Chain A, Crystal Structure Of A Protein Api92 From Yersinia
Pseudotuberculosis, Pfam Duf1281
Length = 300
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 16/21 (76%)
Query: 215 DSYNRGEKIDSSKFGADPGLP 235
D Y+RG+ +DS ++GA P LP
Sbjct: 264 DCYDRGDHVDSGEYGAGPFLP 284
>pdb|1GWZ|A Chain A, Crystal Structure Of The Catalytic Domain Of The Protein
Tyrosine Phosphatase Shp-1
Length = 299
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 28/46 (60%), Gaps = 5/46 (10%)
Query: 125 FDFIDRRRKE----GGVLVHCFAGVSRSAAIITAYLMRTEQLSSEG 166
D I++R++ G ++VHC AG+ R+ II ++ E +S++G
Sbjct: 191 LDQINQRQESLPHAGPIIVHCSAGIGRTGTIIVIDML-MENISTKG 235
>pdb|4GS0|A Chain A, Crystal Structure Of Shp1 Catalytic Domain With Jak1
Activation Loop Peptide
pdb|4GS0|B Chain B, Crystal Structure Of Shp1 Catalytic Domain With Jak1
Activation Loop Peptide
Length = 308
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 113 ESENLLDYLDVCFDFIDRRRKEGGVLVHCFAGVSRSAAIITAYLMRTEQLSSEG 166
E +L +LD + G ++VHC AG+ R+ II ++ E +S++G
Sbjct: 205 EPGGVLSFLDQINQRQESLPHAGPIIVHCSAGIGRTGTIIVIDML-MENISTKG 257
>pdb|2FH7|A Chain A, Crystal Structure Of The Phosphatase Domains Of Human Ptp
Sigma
Length = 595
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 115 ENLLDYLDVCFDFIDRRRKEGGVLVHCFAGVSRSAAIITAYLMRTEQLSSEGALE 169
E +D++ ++ ++G + VHC AGV R+ IT ++ E++ EG ++
Sbjct: 493 EGFIDFIGQVHKTKEQFGQDGPISVHCSAGVGRTGVFITLSIV-LERMRYEGVVD 546
>pdb|3SR9|A Chain A, Crystal Structure Of Mouse Ptpsigma
Length = 583
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 115 ENLLDYLDVCFDFIDRRRKEGGVLVHCFAGVSRSAAIITAYLMRTEQLSSEGALE 169
E +D++ ++ ++G + VHC AGV R+ IT ++ E++ EG ++
Sbjct: 495 EGFIDFIGQVHKTKEQFGQDGPISVHCSAGVGRTGVFITLSIV-LERMRYEGVVD 548
>pdb|2B3O|A Chain A, Crystal Structure Of Human Tyrosine Phosphatase Shp-1
Length = 532
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 113 ESENLLDYLDVCFDFIDRRRKEGGVLVHCFAGVSRSAAIITAYLMRTEQLSSEG 166
E +L +LD + G ++VHC AG+ R+ II ++ E +S++G
Sbjct: 425 EPGGVLSFLDQINQRQESLPHAGPIIVHCSAGIGRTGTIIVIDML-MENISTKG 477
>pdb|4ERC|A Chain A, Structure Of Vhz Bound To Metavanadate
pdb|4ERC|B Chain B, Structure Of Vhz Bound To Metavanadate
Length = 150
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 119 DYLDVCFDFIDRRRKEG-GVLVHCFAGVSRSAAIITAYLMRTEQLSSEGALESLRQ 173
D +D +D G V VHC G R+ ++ YL++ L++ A+ +R+
Sbjct: 72 DQIDRFVQIVDEANARGEAVGVHCALGFGRTGTMLACYLVKERGLAAGDAIAEIRR 127
>pdb|3O4S|A Chain A, Crystal Structure Of Heptp With A Closed Wpd Loop And An
Ordered E- Loop
pdb|3O4T|A Chain A, Crystal Structure Of Heptp With An Open Wpd Loop And
Partially Depleted Active Site
pdb|3O4U|A Chain A, Crystal Structure Of Heptp With An Atypically Open Wpd
Loop
Length = 308
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 135 GGVLVHCFAGVSRSAAIITAYLMRTEQLSSEGALESLRQSCESVCPNDGFLEQLKMFE 192
G ++VHC AG+ R+ I A + +QL + G ++ L C+ G ++ + ++
Sbjct: 233 GPIVVHCSAGIGRTGCFI-ATRIGCQQLKARGEVDILGIVCQLRLDRGGMIQTAEQYQ 289
>pdb|2GP0|A Chain A, Heptp Catalytic Domain (Residues 44-339), S225d Mutant
Length = 309
Score = 29.6 bits (65), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 135 GGVLVHCFAGVSRSAAIITAYLMRTEQLSSEGALESLRQSCESVCPNDGFLEQLKMFE 192
G ++VHC AG+ R+ I A + +QL + G ++ L C+ G ++ + ++
Sbjct: 234 GPIVVHCSAGIGRTGCFI-ATRIGCQQLKARGEVDILGIVCQLRLDRGGMIQTAEQYQ 290
>pdb|1ZC0|A Chain A, Crystal Structure Of Human Hematopoietic Tyrosine
Phosphatase (heptp) Catalytic Domain
Length = 309
Score = 29.6 bits (65), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 135 GGVLVHCFAGVSRSAAIITAYLMRTEQLSSEGALESLRQSCESVCPNDGFLEQLKMFE 192
G ++VHC AG+ R+ I A + +QL + G ++ L C+ G ++ + ++
Sbjct: 234 GPIVVHCSAGIGRTGCFI-ATRIGCQQLKARGEVDILGIVCQLRLDRGGMIQTAEQYQ 290
>pdb|2QDC|A Chain A, Crystal Structure Of The Heptp Catalytic Domain D236a
Mutant
Length = 309
Score = 29.6 bits (65), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 135 GGVLVHCFAGVSRSAAIITAYLMRTEQLSSEGALESLRQSCESVCPNDGFLEQLKMFE 192
G ++VHC AG+ R+ I A + +QL + G ++ L C+ G ++ + ++
Sbjct: 234 GPIVVHCSAGIGRTGCFI-ATRIGCQQLKARGEVDILGIVCQLRLDRGGMIQTAEQYQ 290
>pdb|2CFV|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase
Receptor Type J
Length = 316
Score = 29.6 bits (65), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 117 LLDYLDVCFDFIDRRRKEGGVLVHCFAGVSRSAAII 152
L+++ + D++ + E +LVHC AGV R+ I
Sbjct: 220 LINFRYLVRDYMKQSPPESPILVHCSAGVGRTGTFI 255
>pdb|2A3K|A Chain A, Crystal Structure Of The Human Protein Tyrosine
Phosphatase, Ptpn7 (Heptp, Hematopoietic Protein
Tyrosine Phosphatase)
Length = 296
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 135 GGVLVHCFAGVSRSAAIITAYLMRTEQLSSEGALESLRQSCESVCPNDGFLEQLKMFE 192
G ++VHC AG+ R+ I A + +QL + G ++ L C+ G ++ + ++
Sbjct: 223 GPIVVHCSAGIGRTGCFI-ATRIGCQQLKARGEVDILGIVCQLRLDRGGMIQTAEQYQ 279
>pdb|2IMG|A Chain A, Crystal Structure Of Dual Specificity Protein Phosphatase
23 From Homo Sapiens In Complex With Ligand Malate Ion
Length = 151
Score = 28.9 bits (63), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 119 DYLDVCFDFIDRRRKEG-GVLVHCFAGVSRSAAIITAYLMRTEQLSSEGALESLRQ 173
D +D +D G V VHC G R+ + YL++ L++ A+ +R+
Sbjct: 73 DQIDRFVQIVDEANARGEAVGVHCALGFGRTGTXLACYLVKERGLAAGDAIAEIRR 128
>pdb|2CJZ|A Chain A, Crystal Structure Of The C472s Mutant Of Human Protein
Tyrosine Phosphatase Ptpn5 (Step, Striatum Enriched
Phosphatase) In Complex With Phosphotyrosine
Length = 305
Score = 28.5 bits (62), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 13/56 (23%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 137 VLVHCFAGVSRSAAIITAYLMRTEQLSSEGALESLRQSCESVCPNDGFLEQLKMFE 192
++VH AG+ R+ I + +QL EG ++ L+ +C+ G ++ + ++
Sbjct: 234 IIVHSSAGIGRTGCFIATSIC-CQQLRQEGVVDILKTTCQLRQDRGGMIQTCEQYQ 288
>pdb|2BV5|A Chain A, Crystal Structure Of The Human Protein Tyrosine
Phosphatase Ptpn5 At 1.8a Resolution
Length = 282
Score = 28.5 bits (62), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 13/56 (23%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 137 VLVHCFAGVSRSAAIITAYLMRTEQLSSEGALESLRQSCESVCPNDGFLEQLKMFE 192
++VH AG+ R+ I + +QL EG ++ L+ +C+ G ++ + ++
Sbjct: 213 IIVHXSAGIGRTGCFIATSIC-CQQLRQEGVVDILKTTCQLRQDRGGMIQTCEQYQ 267
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.135 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,420,172
Number of Sequences: 62578
Number of extensions: 418420
Number of successful extensions: 1016
Number of sequences better than 100.0: 71
Number of HSP's better than 100.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 944
Number of HSP's gapped (non-prelim): 79
length of query: 366
length of database: 14,973,337
effective HSP length: 100
effective length of query: 266
effective length of database: 8,715,537
effective search space: 2318332842
effective search space used: 2318332842
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)