BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017792
(366 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359484305|ref|XP_002279464.2| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
[Vitis vinifera]
gi|297738654|emb|CBI27899.3| unnamed protein product [Vitis vinifera]
Length = 421
Score = 582 bits (1501), Expect = e-164, Method: Compositional matrix adjust.
Identities = 303/368 (82%), Positives = 329/368 (89%), Gaps = 8/368 (2%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
+SKK+LAL+QALDQIT+SFGKGSIMWLGRSV+ +HVPVVSTGSFALDI LG GGLPKGRV
Sbjct: 55 LSKKELALRQALDQITTSFGKGSIMWLGRSVSSKHVPVVSTGSFALDIVLGIGGLPKGRV 114
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
VEIYGPEASGKTTLALHVIAEAQ+QGGYCVF+DAEHALDP+LAE IGV T+NLLL+QPDC
Sbjct: 115 VEIYGPEASGKTTLALHVIAEAQKQGGYCVFVDAEHALDPALAEAIGVNTQNLLLSQPDC 174
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS
Sbjct: 175 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 234
Query: 181 LSLSQTILIFINQVRAKLSTF-GFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETI 239
LSLSQTILIFINQVRAKLSTF GFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETI
Sbjct: 235 LSLSQTILIFINQVRAKLSTFGGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETI 294
Query: 240 GSQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASK-AGAMFTYNDRN 298
GSQ+ VK+VKNK APPFKTAQFELEFGKGI RESEI++L KHKF K GAM++YN ++
Sbjct: 295 GSQVLVKVVKNKHAPPFKTAQFELEFGKGICRESEIVELGCKHKFIIKGGGAMYSYNGQS 354
Query: 299 FRGKEAFKQFLVENESVREELVIKLREKLVVD---HKEPQTAVTDEDSTEETVSTISPDS 355
FRGK+A KQFL +NES REEL+ KLREKLV + KE + DED E T+ PD+
Sbjct: 355 FRGKDAIKQFLSQNESEREELMRKLREKLVGETNKEKELEAEAVDEDIAE---GTVPPDT 411
Query: 356 TDEEAAAV 363
TDEE AV
Sbjct: 412 TDEEVTAV 419
>gi|357449857|ref|XP_003595205.1| RecA [Medicago truncatula]
gi|355484253|gb|AES65456.1| RecA [Medicago truncatula]
Length = 424
Score = 577 bits (1488), Expect = e-162, Method: Compositional matrix adjust.
Identities = 285/371 (76%), Positives = 324/371 (87%), Gaps = 11/371 (2%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
MSKKDLALQQA+DQITS+FGKGSIMWLGR+V+P++VPVVSTGSFALDIALG GLPKGRV
Sbjct: 60 MSKKDLALQQAMDQITSTFGKGSIMWLGRTVSPKNVPVVSTGSFALDIALGIFGLPKGRV 119
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
VEI+GPEASGKTTLALHVIAEAQ+QGGYC FIDAEHALD SLAE+IGV TENLLL+QPDC
Sbjct: 120 VEIFGPEASGKTTLALHVIAEAQKQGGYCAFIDAEHALDKSLAESIGVNTENLLLSQPDC 179
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQALSLVDTLIRSGS+DV+VVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKL HS
Sbjct: 180 GEQALSLVDTLIRSGSIDVIVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLCHS 239
Query: 181 LSLSQTILIFINQVRAKLSTF-GFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETI 239
LSLSQ ILIFINQVR+K+STF GFGGPTEVTCGGNALKFY+SVRLNIKR+G VKKGEET+
Sbjct: 240 LSLSQCILIFINQVRSKISTFGGFGGPTEVTCGGNALKFYSSVRLNIKRVGFVKKGEETV 299
Query: 240 GSQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF 299
GSQ+ VK+VKNK APPFKTAQFELEFGKGI RE+EII+L++KHKF K+G+ + YN +N+
Sbjct: 300 GSQVLVKVVKNKHAPPFKTAQFELEFGKGICREAEIIELSIKHKFIKKSGSFYEYNGKNY 359
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDE----DSTEETVSTISPDS 355
GK+A K L+ + + ++L KLREKL+ + E +T + D TEE +SPDS
Sbjct: 360 HGKDALKSHLINGDGL-QDLTTKLREKLL--NAETETVSESQEMVGDVTEE---MLSPDS 413
Query: 356 TDEEAAAVVEA 366
TDEE A V EA
Sbjct: 414 TDEETAVVAEA 424
>gi|356561937|ref|XP_003549233.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
[Glycine max]
Length = 459
Score = 574 bits (1480), Expect = e-161, Method: Compositional matrix adjust.
Identities = 299/380 (78%), Positives = 332/380 (87%), Gaps = 14/380 (3%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
MSKK+LALQQALDQITS+FGKGSIMWLGRSV+P++VPVVSTGSFALD+ALG GGLPKGRV
Sbjct: 80 MSKKELALQQALDQITSAFGKGSIMWLGRSVSPKNVPVVSTGSFALDVALGIGGLPKGRV 139
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
VEIYGPEASGKTTLALHVIAEAQ+QGGYCVF+DAEHALD +LAE+IGV T NLLL+QPDC
Sbjct: 140 VEIYGPEASGKTTLALHVIAEAQKQGGYCVFVDAEHALDKTLAESIGVNTTNLLLSQPDC 199
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSH+
Sbjct: 200 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHA 259
Query: 181 LSLSQTILIFINQVRAKLSTF-GFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETI 239
LSLSQTILIFINQVR+K+STF GF GPTEVTCGGNALKFYASVRLNIKRIG VKKGEE +
Sbjct: 260 LSLSQTILIFINQVRSKISTFGGFSGPTEVTCGGNALKFYASVRLNIKRIGFVKKGEEIL 319
Query: 240 GSQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF 299
GSQ+ VK+VKNKLAPPFKTA+FEL+FGKGI +E+EIIDL++ HK SKAGAMF YN+ +F
Sbjct: 320 GSQVLVKVVKNKLAPPFKTAEFELQFGKGICKETEIIDLSVNHKLISKAGAMFYYNEHSF 379
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVDHKEPQT-------AVTDE----DSTEETV 348
RGK+A K FL EN S EEL +KLREKL+ E VT+E DST + V
Sbjct: 380 RGKDALKNFLAENRSALEELEMKLREKLLNAETEKMQESDVINGYVTEEIATVDSTNDNV 439
Query: 349 S--TISPDSTDEEAAAVVEA 366
+ + DSTDEEAAA+VEA
Sbjct: 440 TEKIATVDSTDEEAAAIVEA 459
>gi|224087995|ref|XP_002308284.1| predicted protein [Populus trichocarpa]
gi|222854260|gb|EEE91807.1| predicted protein [Populus trichocarpa]
Length = 418
Score = 567 bits (1461), Expect = e-159, Method: Compositional matrix adjust.
Identities = 290/363 (79%), Positives = 319/363 (87%), Gaps = 3/363 (0%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
MSKK+LALQQALDQITS FGKG+IMW GRS P++VPVVSTGSFALDIALG GG PKGRV
Sbjct: 55 MSKKELALQQALDQITSQFGKGAIMWFGRSEAPKNVPVVSTGSFALDIALGCGGFPKGRV 114
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
VEI+GPEASGKTTLALHVIAEAQ+QGGYCVF+DAEHALD SLA+ IGV TENLLL+QPDC
Sbjct: 115 VEIFGPEASGKTTLALHVIAEAQKQGGYCVFVDAEHALDSSLAKAIGVNTENLLLSQPDC 174
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQALSLVDTLIRSGSVDVVVVDSVAALVPK ELDGEMGDAHMAMQARLMSQALRKLSHS
Sbjct: 175 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKSELDGEMGDAHMAMQARLMSQALRKLSHS 234
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
LS SQTIL+FINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNI+R+G +KKGEET G
Sbjct: 235 LSQSQTILVFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIRRVGFIKKGEETTG 294
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNFR 300
+Q+ VKIVKNKLAPPFKT QFELEFGKGISRESEII+LALKHK K+G+ + N + +
Sbjct: 295 TQVQVKIVKNKLAPPFKTVQFELEFGKGISRESEIIELALKHKLIKKSGSFYDCNGKKYH 354
Query: 301 GKEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDST-EETVSTISPDSTDEE 359
GKEAFK+FL N+ V+EEL++KLREKL+ E + DE + E T ISPDSTDEE
Sbjct: 355 GKEAFKEFLAHNDDVQEELMMKLREKLL--EGETGQELGDESTDGEPTQEIISPDSTDEE 412
Query: 360 AAA 362
AA
Sbjct: 413 VAA 415
>gi|255546127|ref|XP_002514123.1| DNA repair protein reca, putative [Ricinus communis]
gi|223546579|gb|EEF48077.1| DNA repair protein reca, putative [Ricinus communis]
Length = 380
Score = 562 bits (1448), Expect = e-158, Method: Compositional matrix adjust.
Identities = 287/355 (80%), Positives = 318/355 (89%), Gaps = 6/355 (1%)
Query: 15 ITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASGKTTL 74
ITS++GKG+IMW GRS+ P+ VPVVSTGSFALD+ALGTGGLPKGRVVEIYGPEASGKTTL
Sbjct: 29 ITSAYGKGAIMWFGRSIAPKDVPVVSTGSFALDVALGTGGLPKGRVVEIYGPEASGKTTL 88
Query: 75 ALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSLVDTLIRS 134
ALHVIAEAQ+QGGYCVF+DAEHALD SLA++IGV TENLLL+QPDCGEQALSLVDTLIRS
Sbjct: 89 ALHVIAEAQKQGGYCVFVDAEHALDSSLAQSIGVNTENLLLSQPDCGEQALSLVDTLIRS 148
Query: 135 GSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFINQV 194
GSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS S+T+LIFINQV
Sbjct: 149 GSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSQSETVLIFINQV 208
Query: 195 RAKLSTF-GFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVKIVKNKLA 253
RAKLSTF GFGGP EVTCGGNALKFYASVRLNI+R+GL+KKGEETIGSQ+ VKIVKNKLA
Sbjct: 209 RAKLSTFGGFGGPQEVTCGGNALKFYASVRLNIRRVGLIKKGEETIGSQVQVKIVKNKLA 268
Query: 254 PPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNFRGKEAFKQFLVENE 313
PPFKT QFELEFGKGI R+SEI++L +KHKF KAG+ + YN +NF GKEAF++FL EN+
Sbjct: 269 PPFKTVQFELEFGKGICRDSEIMELGVKHKFLGKAGSFYNYNGQNFHGKEAFRKFLAEND 328
Query: 314 SVREELVIKLREKLVVDH--KEPQTAVTDEDSTEETVSTISPDSTDEEAAAVVEA 366
+ REELV+KLREKL+ H K + VTDE EE TISPDSTDEEA VEA
Sbjct: 329 NAREELVMKLREKLLNAHIDKGQGSEVTDEALVEE---TISPDSTDEEAVTAVEA 380
>gi|356532732|ref|XP_003534925.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
[Glycine max]
Length = 432
Score = 562 bits (1448), Expect = e-158, Method: Compositional matrix adjust.
Identities = 269/329 (81%), Positives = 304/329 (92%), Gaps = 2/329 (0%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
+SKKDLALQQA+DQITS++GKGSIMWLGRSV P++VPVVSTGSFALDIALG GGLPKGRV
Sbjct: 60 LSKKDLALQQAIDQITSAYGKGSIMWLGRSVAPKNVPVVSTGSFALDIALGVGGLPKGRV 119
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
VEI+GPEASGKTTLALHVIAEAQ+QGGYC F+DAEHALD +LAE+IGV T+NLLL+QPDC
Sbjct: 120 VEIFGPEASGKTTLALHVIAEAQKQGGYCAFVDAEHALDKTLAESIGVDTKNLLLSQPDC 179
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQALSLVDTLIRSGSVD +VVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKL HS
Sbjct: 180 GEQALSLVDTLIRSGSVDAIVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLCHS 239
Query: 181 LSLSQTILIFINQVRAKLSTF-GFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETI 239
LSLSQ ILIFINQVR+K+STF G+GGPTEVTCGGNALKFYASVRLNIKRIG VKKGEET+
Sbjct: 240 LSLSQCILIFINQVRSKISTFGGYGGPTEVTCGGNALKFYASVRLNIKRIGFVKKGEETL 299
Query: 240 GSQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF 299
GSQ+ VK+VKNK APPFKTAQFE+EFGKGISRE+EII+L++K+K K+G+ F YN RNF
Sbjct: 300 GSQVLVKVVKNKHAPPFKTAQFEIEFGKGISREAEIIELSVKYKIIKKSGSFFEYNGRNF 359
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLV 328
GK+A K+FL E++ V +EL KLREK++
Sbjct: 360 HGKDALKRFLAESDGV-QELATKLREKIL 387
>gi|224122482|ref|XP_002330492.1| predicted protein [Populus trichocarpa]
gi|222872426|gb|EEF09557.1| predicted protein [Populus trichocarpa]
Length = 357
Score = 560 bits (1443), Expect = e-157, Method: Compositional matrix adjust.
Identities = 287/359 (79%), Positives = 314/359 (87%), Gaps = 3/359 (0%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVV 61
SKKDLALQQALDQITS FGKGSIMW GRS P++VPVVSTGSFALDIALG GG PKGRVV
Sbjct: 1 SKKDLALQQALDQITSQFGKGSIMWFGRSEAPKNVPVVSTGSFALDIALGCGGFPKGRVV 60
Query: 62 EIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCG 121
EI+GPEASGKTTLALHVIAEAQ+QGGYCVF+DAEHALD SLA+ IGV TENLLL+QPDCG
Sbjct: 61 EIFGPEASGKTTLALHVIAEAQKQGGYCVFMDAEHALDSSLAKAIGVNTENLLLSQPDCG 120
Query: 122 EQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSL 181
EQALSLVDTLIRSGSVDVVVVDSVAALVPK ELDGEMGDAHMAMQARLMSQALRKLSHSL
Sbjct: 121 EQALSLVDTLIRSGSVDVVVVDSVAALVPKSELDGEMGDAHMAMQARLMSQALRKLSHSL 180
Query: 182 SLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGS 241
S SQT+LIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNI+R+G +KKGEET G+
Sbjct: 181 SQSQTVLIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIRRVGFIKKGEETTGT 240
Query: 242 QIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNFRG 301
Q+ VKI KNKLAPPFKT QFELEFGKGISRESEII+LA+KHKF K GA + N R + G
Sbjct: 241 QVQVKIAKNKLAPPFKTVQFELEFGKGISRESEIIELAVKHKFIKKNGAFYDCNGRKYHG 300
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDST-EETVSTISPDSTDEE 359
KEA ++FL N+ V+EEL++KLREKL+ E + DE + E T +I PDSTDEE
Sbjct: 301 KEALREFLAHNDDVQEELMMKLREKLL--EAETDQELKDETTDGEPTQESIPPDSTDEE 357
>gi|42569151|ref|NP_179539.2| DNA repair protein recA-like 3 [Arabidopsis thaliana]
gi|209572665|sp|Q9ZUP2.2|RECA3_ARATH RecName: Full=DNA repair protein recA homolog 3, mitochondrial;
AltName: Full=Recombinase A homolog 3; Flags: Precursor
gi|119935859|gb|ABM06015.1| At2g19490 [Arabidopsis thaliana]
gi|330251794|gb|AEC06888.1| DNA repair protein recA-like 3 [Arabidopsis thaliana]
Length = 430
Score = 557 bits (1436), Expect = e-156, Method: Compositional matrix adjust.
Identities = 279/361 (77%), Positives = 323/361 (89%), Gaps = 1/361 (0%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
MSKK++ALQQALDQITSSFGKGSIM+LGR+V+PR+VPV STGSFALD+ALG GGLPKGRV
Sbjct: 55 MSKKEIALQQALDQITSSFGKGSIMYLGRAVSPRNVPVFSTGSFALDVALGVGGLPKGRV 114
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
VEIYGPEASGKTTLALHVIAEAQ+QGG CVF+DAEHALD SLA+ IGV TENLLL+QPDC
Sbjct: 115 VEIYGPEASGKTTLALHVIAEAQKQGGTCVFVDAEHALDSSLAKAIGVNTENLLLSQPDC 174
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQALSLVDTLIRSGSVDV+VVDSVAALVPKGEL+GEMGDAHMAMQARLMSQALRKLSHS
Sbjct: 175 GEQALSLVDTLIRSGSVDVIVVDSVAALVPKGELEGEMGDAHMAMQARLMSQALRKLSHS 234
Query: 181 LSLSQTILIFINQVRAKLSTF-GFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETI 239
LSLSQT+LIFINQVR+KLSTF GFGGPTEVTCGGNALKFYAS+RLNIKRIGL+KKGEET
Sbjct: 235 LSLSQTLLIFINQVRSKLSTFGGFGGPTEVTCGGNALKFYASMRLNIKRIGLIKKGEETT 294
Query: 240 GSQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF 299
GSQ++VKIVKNKLAPPF+TAQFELEFGKGI + +EIIDL++KHKF +K G + N +N+
Sbjct: 295 GSQVSVKIVKNKLAPPFRTAQFELEFGKGICKITEIIDLSIKHKFIAKNGTFYNLNGKNY 354
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETVSTISPDSTDEE 359
GKEA K+FL +NES +EEL+ KL++KL+ D + ++ + + +SPD+TD+E
Sbjct: 355 HGKEALKRFLKQNESDQEELMKKLQDKLIADEAADKETESESEEEDSLRVVVSPDNTDDE 414
Query: 360 A 360
+
Sbjct: 415 S 415
>gi|4191779|gb|AAD10148.1| putative recA protein [Arabidopsis thaliana]
Length = 376
Score = 557 bits (1435), Expect = e-156, Method: Compositional matrix adjust.
Identities = 279/361 (77%), Positives = 323/361 (89%), Gaps = 1/361 (0%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
MSKK++ALQQALDQITSSFGKGSIM+LGR+V+PR+VPV STGSFALD+ALG GGLPKGRV
Sbjct: 1 MSKKEIALQQALDQITSSFGKGSIMYLGRAVSPRNVPVFSTGSFALDVALGVGGLPKGRV 60
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
VEIYGPEASGKTTLALHVIAEAQ+QGG CVF+DAEHALD SLA+ IGV TENLLL+QPDC
Sbjct: 61 VEIYGPEASGKTTLALHVIAEAQKQGGTCVFVDAEHALDSSLAKAIGVNTENLLLSQPDC 120
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQALSLVDTLIRSGSVDV+VVDSVAALVPKGEL+GEMGDAHMAMQARLMSQALRKLSHS
Sbjct: 121 GEQALSLVDTLIRSGSVDVIVVDSVAALVPKGELEGEMGDAHMAMQARLMSQALRKLSHS 180
Query: 181 LSLSQTILIFINQVRAKLSTF-GFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETI 239
LSLSQT+LIFINQVR+KLSTF GFGGPTEVTCGGNALKFYAS+RLNIKRIGL+KKGEET
Sbjct: 181 LSLSQTLLIFINQVRSKLSTFGGFGGPTEVTCGGNALKFYASMRLNIKRIGLIKKGEETT 240
Query: 240 GSQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF 299
GSQ++VKIVKNKLAPPF+TAQFELEFGKGI + +EIIDL++KHKF +K G + N +N+
Sbjct: 241 GSQVSVKIVKNKLAPPFRTAQFELEFGKGICKITEIIDLSIKHKFIAKNGTFYNLNGKNY 300
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETVSTISPDSTDEE 359
GKEA K+FL +NES +EEL+ KL++KL+ D + ++ + + +SPD+TD+E
Sbjct: 301 HGKEALKRFLKQNESDQEELMKKLQDKLIADEAADKETESESEEEDSLRVVVSPDNTDDE 360
Query: 360 A 360
+
Sbjct: 361 S 361
>gi|356558365|ref|XP_003547477.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
[Glycine max]
Length = 423
Score = 556 bits (1433), Expect = e-156, Method: Compositional matrix adjust.
Identities = 264/329 (80%), Positives = 302/329 (91%), Gaps = 2/329 (0%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
MSKKD+ALQQA+DQITS++GKGSIMWLGRS+ P++VPVVSTGSFALDIALG GGLPKGRV
Sbjct: 53 MSKKDMALQQAIDQITSAYGKGSIMWLGRSMAPKNVPVVSTGSFALDIALGVGGLPKGRV 112
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
VEI+GPEASGKTTLALH+IAEAQ+ GGYC F+DAEHALD +LAE+IGV T+NLLL+QPDC
Sbjct: 113 VEIFGPEASGKTTLALHMIAEAQKLGGYCAFVDAEHALDKTLAESIGVDTKNLLLSQPDC 172
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQALSLVDTLIRSGSVD +VVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKL HS
Sbjct: 173 GEQALSLVDTLIRSGSVDAIVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLCHS 232
Query: 181 LSLSQTILIFINQVRAKLSTF-GFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETI 239
LSLSQ IL+FINQVR+K+STF G+GGPTEVTCGGNALKFYASVRLNIKRIG VKKGEET+
Sbjct: 233 LSLSQCILVFINQVRSKISTFGGYGGPTEVTCGGNALKFYASVRLNIKRIGFVKKGEETL 292
Query: 240 GSQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF 299
GSQ+ VK+VKNK APPFKTAQFE+EFGKGISRE+EII+L++K+K K+G+ F YN RNF
Sbjct: 293 GSQVLVKVVKNKHAPPFKTAQFEIEFGKGISREAEIIELSVKYKIIKKSGSFFEYNGRNF 352
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLV 328
GK+A K+FL E++ V +EL LREK++
Sbjct: 353 HGKDALKRFLAESDGV-QELATMLREKIL 380
>gi|356545731|ref|XP_003541289.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair protein recA homolog 3,
mitochondrial-like [Glycine max]
Length = 442
Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust.
Identities = 281/367 (76%), Positives = 317/367 (86%), Gaps = 4/367 (1%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
MSKK+LALQQALDQITS+FG GSIMWLGRSV+P+ +PVVSTGSFALD+AL GGLP G V
Sbjct: 79 MSKKELALQQALDQITSAFGNGSIMWLGRSVSPKSLPVVSTGSFALDVALVIGGLPXGHV 138
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
VEIYGPEAS KT LALHVIAEAQ+QGGYCVF+DAEHALD LAE+IGV T NLLL+QPDC
Sbjct: 139 VEIYGPEASVKTILALHVIAEAQKQGGYCVFVDAEHALDKKLAESIGVNTTNLLLSQPDC 198
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQALSLVDTLIRSGSVDV+VVDSVAALVPKGELDGEMG AHMAMQARLMSQALRKLSH+
Sbjct: 199 GEQALSLVDTLIRSGSVDVIVVDSVAALVPKGELDGEMGHAHMAMQARLMSQALRKLSHA 258
Query: 181 LSLSQTILIFINQVRAKLSTF-GFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETI 239
LS SQ ILIFINQVR+ +STF GF GPTE TCGGN LKFYASVRLNIKRIG VKKGEE +
Sbjct: 259 LSPSQCILIFINQVRSNISTFGGFSGPTEXTCGGNTLKFYASVRLNIKRIGFVKKGEEIL 318
Query: 240 GSQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF 299
GSQ+ VK+VKNKL PPFK A+FEL+FGKGIS+E+EIIDL++K+K SKAGAMF YN+++F
Sbjct: 319 GSQVLVKVVKNKLVPPFKIAEFELQFGKGISKETEIIDLSVKNKLISKAGAMFYYNEQSF 378
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETVSTISPDSTDEE 359
RGK+A K FL EN+S EEL +KLREKL+ E V + D E ++T+ DSTDEE
Sbjct: 379 RGKDALKNFLAENQSALEELEMKLREKLLNAETEKMWDVINGD-VREAIATV--DSTDEE 435
Query: 360 AAAVVEA 366
AAA+VEA
Sbjct: 436 AAAIVEA 442
>gi|115441659|ref|NP_001045109.1| Os01g0901200 [Oryza sativa Japonica Group]
gi|56784510|dbj|BAD82767.1| putative recA protein [Oryza sativa Japonica Group]
gi|56784869|dbj|BAD82109.1| putative recA protein [Oryza sativa Japonica Group]
gi|113534640|dbj|BAF07023.1| Os01g0901200 [Oryza sativa Japonica Group]
gi|222619696|gb|EEE55828.1| hypothetical protein OsJ_04434 [Oryza sativa Japonica Group]
Length = 429
Score = 526 bits (1354), Expect = e-147, Method: Compositional matrix adjust.
Identities = 274/370 (74%), Positives = 318/370 (85%), Gaps = 6/370 (1%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
+SKKDLAL QA+DQITS+FGKG+IMWLGRS R VPVVSTGSF+LD+ALGTGGLPKGRV
Sbjct: 62 LSKKDLALHQAIDQITSAFGKGAIMWLGRSEGRREVPVVSTGSFSLDLALGTGGLPKGRV 121
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+E+YGPEASGKTTLALHVIAEAQ+ GGYC F+DAEHALDP+LAE+IGV T NLLL+QPDC
Sbjct: 122 IEVYGPEASGKTTLALHVIAEAQKHGGYCAFVDAEHALDPALAESIGVNTSNLLLSQPDC 181
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQALSLVDTLIRSGSVDVVVVDSVAALVPK ELDGEMGDAH+A+QARLMSQALRKLSHS
Sbjct: 182 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKSELDGEMGDAHVALQARLMSQALRKLSHS 241
Query: 181 LSLSQTILIFINQVRAKLSTF-GFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETI 239
LSLSQTIL+FINQ+R+K++TF GFGGP EVT GGNALKFYASVR+NIKRIGLVKKGEETI
Sbjct: 242 LSLSQTILLFINQIRSKVTTFGGFGGPMEVTSGGNALKFYASVRMNIKRIGLVKKGEETI 301
Query: 240 GSQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASK-AGAMFTYNDRN 298
GSQ+ VKIVKNK APPFKTAQFELEFGKGI R SE+I+L LKHK K GA +++N+ +
Sbjct: 302 GSQVLVKIVKNKHAPPFKTAQFELEFGKGICRSSELIELGLKHKLVKKLGGAFYSFNEES 361
Query: 299 FRGKEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTD--EDSTEETVSTISPDST 356
+RGK+A K +L ENES+ +EL LR+ + + Q D D EE+++T + S+
Sbjct: 362 YRGKDALKSYLNENESIAKELETNLRKLMETQAPKKQEDEGDFLSDLPEESLATET--SS 419
Query: 357 DEEAAAVVEA 366
+EE AAV+EA
Sbjct: 420 EEELAAVIEA 429
>gi|449446596|ref|XP_004141057.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
[Cucumis sativus]
Length = 422
Score = 525 bits (1351), Expect = e-146, Method: Compositional matrix adjust.
Identities = 276/368 (75%), Positives = 318/368 (86%), Gaps = 4/368 (1%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
+SKK+LALQQALDQIT++FGKGSIMWLGRS + + VPVVS+GS +LDIALG GG PKGRV
Sbjct: 57 LSKKELALQQALDQITTAFGKGSIMWLGRSQSSKSVPVVSSGSVSLDIALGVGGFPKGRV 116
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+EIYGPEASGKTTLALHVIAE Q+QGG CVFIDAEHALDP+LA+TIGV TENLLL+QPDC
Sbjct: 117 IEIYGPEASGKTTLALHVIAETQKQGGCCVFIDAEHALDPALAQTIGVDTENLLLSQPDC 176
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQALSLVDTLIRSGSVD VVVDSVAALVPK ELDGEMGDAHMAMQARLMSQALRKL HS
Sbjct: 177 GEQALSLVDTLIRSGSVDCVVVDSVAALVPKAELDGEMGDAHMAMQARLMSQALRKLCHS 236
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
LS SQTILIFINQVR+K+ST+G+GGP+EVTCGGNALKFYASVRLNI+RIG V +GEETIG
Sbjct: 237 LSQSQTILIFINQVRSKMSTYGYGGPSEVTCGGNALKFYASVRLNIRRIGSVMRGEETIG 296
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNFR 300
+Q+ VK++KNK+APPF+TA FELEFGKGIS+E+E+IDL K+KF SKAG+ F YN ++F
Sbjct: 297 NQVQVKVMKNKVAPPFRTANFELEFGKGISKEAEVIDLGSKYKFISKAGSFFKYNGQSFH 356
Query: 301 GKEAFKQFLVENESVREELVIKLREKLV-VDHKEPQTAVTDEDSTEETVSTISP-DSTDE 358
GKE FK FL NE VR EL+ K++EKL+ V+ +PQ E S +E TI P +S DE
Sbjct: 357 GKETFKTFLSNNEDVRNELITKIQEKLLDVEMDKPQDGDETEGSPQE--DTIEPSESNDE 414
Query: 359 EAAAVVEA 366
+A VEA
Sbjct: 415 DAVTAVEA 422
>gi|242059571|ref|XP_002458931.1| hypothetical protein SORBIDRAFT_03g042890 [Sorghum bicolor]
gi|241930906|gb|EES04051.1| hypothetical protein SORBIDRAFT_03g042890 [Sorghum bicolor]
Length = 427
Score = 523 bits (1348), Expect = e-146, Method: Compositional matrix adjust.
Identities = 274/369 (74%), Positives = 314/369 (85%), Gaps = 7/369 (1%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
MSKKDLAL QA+DQITS+FGKG+IMWLGRS R VPVVSTGSFALD+ALGTGGLPKGRV
Sbjct: 61 MSKKDLALHQAIDQITSAFGKGAIMWLGRSQGHRDVPVVSTGSFALDMALGTGGLPKGRV 120
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+E+YGPEASGKTTLALHVIAEAQ+ GGYC F+DAEHALDP+LAE IGV T NLLL+QPDC
Sbjct: 121 IEVYGPEASGKTTLALHVIAEAQKNGGYCAFVDAEHALDPALAEKIGVDTNNLLLSQPDC 180
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
EQALSLVDTLIRSGSVDVVVVDSVAALVPK ELDGEMGDAH+A+QARLMSQALRKLSHS
Sbjct: 181 AEQALSLVDTLIRSGSVDVVVVDSVAALVPKTELDGEMGDAHVALQARLMSQALRKLSHS 240
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
LSLSQTIL+FINQ+RAK++TFGFGGPTEVT GGNALKFYASVRLNI+RIGLVKKGEETIG
Sbjct: 241 LSLSQTILLFINQIRAKVATFGFGGPTEVTSGGNALKFYASVRLNIRRIGLVKKGEETIG 300
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASK-AGAMFTYNDRNF 299
SQIAVKIVKNK APPFKTAQFELEFGKGI R SE+ +L LKHK K GA +++ND +F
Sbjct: 301 SQIAVKIVKNKHAPPFKTAQFELEFGKGICRSSELFELGLKHKLIKKTGGAFYSFNDMSF 360
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETV--STISPD-ST 356
GK K +L EN+SV +L ++LR + + + Q A EDS+ + ++P+ S+
Sbjct: 361 CGKNNLKSYLDENKSVANDLEMELRRLMATEAPKEQEA---EDSSPSDLPEEIVTPEVSS 417
Query: 357 DEEAAAVVE 365
+E+ AV+E
Sbjct: 418 EEDLGAVIE 426
>gi|293332481|ref|NP_001170211.1| uncharacterized protein LOC100384162 [Zea mays]
gi|224034357|gb|ACN36254.1| unknown [Zea mays]
gi|414879173|tpg|DAA56304.1| TPA: putative recA DNA recombination family protein [Zea mays]
Length = 425
Score = 520 bits (1340), Expect = e-145, Method: Compositional matrix adjust.
Identities = 268/367 (73%), Positives = 312/367 (85%), Gaps = 3/367 (0%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
MSKKDLAL QA+DQITS+FGKG+IMWLGRS R VPVVSTGS LD+ALGTGGLPKGRV
Sbjct: 59 MSKKDLALHQAIDQITSAFGKGAIMWLGRSQGHRDVPVVSTGSLDLDMALGTGGLPKGRV 118
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
VE+YGPEASGKTTLALHVIAEAQ+ GGYC F+DAEHALDP+LAE+IGV T NLLL+QPDC
Sbjct: 119 VEVYGPEASGKTTLALHVIAEAQKNGGYCAFVDAEHALDPALAESIGVDTNNLLLSQPDC 178
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
EQALSLVDTLIRSGSVDVVVVDSVAALVPK ELDGEMGDAH+A+QARLMSQALRKLSHS
Sbjct: 179 AEQALSLVDTLIRSGSVDVVVVDSVAALVPKTELDGEMGDAHIALQARLMSQALRKLSHS 238
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
LSLSQTIL+FINQ+RAK++TFGFGGPTEVT GGNALKFYASVRLNI+RIGLVKKGEETIG
Sbjct: 239 LSLSQTILLFINQIRAKVATFGFGGPTEVTSGGNALKFYASVRLNIRRIGLVKKGEETIG 298
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKA-GAMFTYNDRNF 299
SQIAVKIVKNK APPFKTAQFELEFGKGI R SE+ +L LKHK K+ G+ +++N + F
Sbjct: 299 SQIAVKIVKNKHAPPFKTAQFELEFGKGICRSSELFELGLKHKLIRKSGGSYYSFNGKAF 358
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETVSTISPD-STDE 358
GK K +L EN+SV +L ++L+ + D + Q A D ++ +++P+ S++E
Sbjct: 359 NGKSNLKSYLTENKSVANDLEMELKRLMGTDASKEQEA-GDSSQSDFPEESVTPEASSEE 417
Query: 359 EAAAVVE 365
+ A++E
Sbjct: 418 DLGAIIE 424
>gi|212274305|ref|NP_001130273.1| uncharacterized protein LOC100191367 [Zea mays]
gi|194688718|gb|ACF78443.1| unknown [Zea mays]
gi|413951639|gb|AFW84288.1| putative recA DNA recombination family protein [Zea mays]
Length = 430
Score = 520 bits (1340), Expect = e-145, Method: Compositional matrix adjust.
Identities = 268/367 (73%), Positives = 310/367 (84%), Gaps = 6/367 (1%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
MSKKDLAL QA+DQITS+FGKG+IMWLGRS R VPVVSTGSFALD+ALGTGGLPKGRV
Sbjct: 64 MSKKDLALHQAIDQITSAFGKGAIMWLGRSQGLRDVPVVSTGSFALDMALGTGGLPKGRV 123
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+E+YGPEASGKTTLALHVIAEAQ+ GGYC F+DAEHALDP+LAE+IGV T NLL++QPDC
Sbjct: 124 IEVYGPEASGKTTLALHVIAEAQKNGGYCAFVDAEHALDPALAESIGVDTNNLLVSQPDC 183
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
EQALSLVDTLIRSGSVDVVVVDSVAALVPK ELDGEMGDAH+A+QARLMSQALRKLSHS
Sbjct: 184 AEQALSLVDTLIRSGSVDVVVVDSVAALVPKTELDGEMGDAHVALQARLMSQALRKLSHS 243
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
LSLSQT+L+FINQ+RAK++TFGFGGPTEVT GGNALKFYASVRLNI+RIG +K+GEETIG
Sbjct: 244 LSLSQTVLLFINQIRAKVATFGFGGPTEVTSGGNALKFYASVRLNIRRIGFLKEGEETIG 303
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASK-AGAMFTYNDRNF 299
SQ+AVKIVKNK APPFKTAQFELEFGKGI R SE+ +L LKHK K GA + +ND +F
Sbjct: 304 SQVAVKIVKNKHAPPFKTAQFELEFGKGICRSSELFELGLKHKLIQKTGGAYYRFNDMSF 363
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETV--STISPDSTD 357
+GK K +L EN+SV +L KLR + + + Q A EDS+ + ++P+++
Sbjct: 364 KGKNNLKSYLTENKSVANDLETKLRRLMGTEAPKEQEA---EDSSPSDLPEEVVTPEASS 420
Query: 358 EEAAAVV 364
EE VV
Sbjct: 421 EEDMGVV 427
>gi|357126357|ref|XP_003564854.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
[Brachypodium distachyon]
Length = 429
Score = 520 bits (1338), Expect = e-145, Method: Compositional matrix adjust.
Identities = 279/372 (75%), Positives = 315/372 (84%), Gaps = 8/372 (2%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
MSKKDLAL QA+DQITSSFGKG+IMWLGRS R VPVVSTGSF+LD+ALG GGLPKGRV
Sbjct: 60 MSKKDLALHQAIDQITSSFGKGAIMWLGRSEGHREVPVVSTGSFSLDLALGIGGLPKGRV 119
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGG--YCVFIDAEHALDPSLAETIGVKTENLLLAQP 118
VE+YGPEASGKTTLALHVIAEAQ+ GG YC FIDAEHALDPSLAE+IGV T NLLL+QP
Sbjct: 120 VEVYGPEASGKTTLALHVIAEAQKHGGGGYCAFIDAEHALDPSLAESIGVDTSNLLLSQP 179
Query: 119 DCGEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLS 178
D EQALSLVDTLIRSGSVDVVVVDSVAALVPK ELDGEMGDAH+A+QARLMSQALRKLS
Sbjct: 180 DSAEQALSLVDTLIRSGSVDVVVVDSVAALVPKTELDGEMGDAHVALQARLMSQALRKLS 239
Query: 179 HSLSLSQTILIFINQVRAKLSTF-GFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEE 237
HSLSLSQTIL+FINQ+RAK+STF GFGGPTEVT GGNALKFYASVRLNI+R+GLVKKGEE
Sbjct: 240 HSLSLSQTILLFINQIRAKVSTFGGFGGPTEVTSGGNALKFYASVRLNIRRVGLVKKGEE 299
Query: 238 TIGSQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASK-AGAMFTYND 296
TIGSQ+ VKIVKNK APPF+TAQFELEFGKGISR SE+++L LKHK K GA +++N+
Sbjct: 300 TIGSQVNVKIVKNKHAPPFRTAQFELEFGKGISRSSELVELGLKHKLVKKTGGAYYSFNE 359
Query: 297 RNFRGKEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTD--EDSTEETVSTISPD 354
+ F GK+A K FL NES+ +EL ++LR + + Q A D D EETV S
Sbjct: 360 KAFHGKDALKSFLTGNESIAKELEMELRRLIETEAPIKQEAEDDLLSDLPEETVR--SDT 417
Query: 355 STDEEAAAVVEA 366
S++E+ AAV+EA
Sbjct: 418 SSEEDLAAVIEA 429
>gi|195638478|gb|ACG38707.1| DNA repair protein recA [Zea mays]
Length = 430
Score = 517 bits (1332), Expect = e-144, Method: Compositional matrix adjust.
Identities = 267/367 (72%), Positives = 309/367 (84%), Gaps = 6/367 (1%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
MSKKDLAL QA+DQITS+FGKG+IMWLGRS R VPVVSTGSFALD+ALGTGGLPKGRV
Sbjct: 64 MSKKDLALHQAIDQITSAFGKGAIMWLGRSQGLRDVPVVSTGSFALDMALGTGGLPKGRV 123
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+E+YGPEASGKTTLALHVIAEAQ+ GGYC F+DAEHALDP+LAE+I V T NLL++QPDC
Sbjct: 124 IEVYGPEASGKTTLALHVIAEAQKNGGYCAFVDAEHALDPALAESIXVDTNNLLVSQPDC 183
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
EQALSLVDTLIRSGSVDVVVVDSVAALVPK ELDGEMGDAH+A+QARLMSQALRKLSHS
Sbjct: 184 AEQALSLVDTLIRSGSVDVVVVDSVAALVPKTELDGEMGDAHVALQARLMSQALRKLSHS 243
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
LSLSQT+L+FINQ+RAK++TFGFGGPTEVT GGNALKFYASVRLNI+RIG +K+GEETIG
Sbjct: 244 LSLSQTVLLFINQIRAKVATFGFGGPTEVTSGGNALKFYASVRLNIRRIGFLKEGEETIG 303
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASK-AGAMFTYNDRNF 299
SQ+AVKIVKNK APPFKTAQFELEFGKGI R SE+ +L LKHK K GA + +ND +F
Sbjct: 304 SQVAVKIVKNKHAPPFKTAQFELEFGKGICRSSELFELGLKHKLIQKTGGAYYRFNDMSF 363
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETV--STISPDSTD 357
+GK K +L EN+SV +L KLR + + + Q A EDS+ + ++P+++
Sbjct: 364 KGKNNLKSYLTENKSVANDLETKLRRLMGTEAPKEQEA---EDSSPSDLPEEVVTPEASS 420
Query: 358 EEAAAVV 364
EE VV
Sbjct: 421 EEDMGVV 427
>gi|326528635|dbj|BAJ97339.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 429
Score = 500 bits (1287), Expect = e-139, Method: Compositional matrix adjust.
Identities = 267/374 (71%), Positives = 310/374 (82%), Gaps = 11/374 (2%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
MSKKDLAL QA+DQIT+SFGKG+IMWLGRS R VPVVSTGSF+LD+ALG GGLPKGRV
Sbjct: 59 MSKKDLALHQAIDQITTSFGKGAIMWLGRSEGHREVPVVSTGSFSLDLALGIGGLPKGRV 118
Query: 61 VEIYGPEASGKTTLALHVIAEAQR--QGGYCVFIDAEHALDPSLAETIGVKTENLLLAQP 118
+E+YGPEASGKTTLALHVIAEAQ+ GGYC F+DAEHALDP+LAE+IGV T NLLL+QP
Sbjct: 119 IEVYGPEASGKTTLALHVIAEAQKLSGGGYCAFVDAEHALDPTLAESIGVDTSNLLLSQP 178
Query: 119 DCGEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLS 178
D EQALSLVDTLIRSGSVDVVVVDSVAALVPK ELDGEMGDAH+A+QARLMSQALRKLS
Sbjct: 179 DSAEQALSLVDTLIRSGSVDVVVVDSVAALVPKTELDGEMGDAHVALQARLMSQALRKLS 238
Query: 179 HSLSLSQTILIFINQVRAKLSTF--GFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGE 236
HSLSLSQT+L+FINQ+R+K+ TF GFGGP EVT GGNALKFYASVRLNI+RIG+VKKGE
Sbjct: 239 HSLSLSQTVLLFINQIRSKVQTFGGGFGGPQEVTSGGNALKFYASVRLNIRRIGMVKKGE 298
Query: 237 ETIGSQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASK-AGAMFTYN 295
E IGSQ+ VKIVKNK APPF+TAQFELEFGKGI R SE+ +L LKHK K GA +++N
Sbjct: 299 EIIGSQVTVKIVKNKHAPPFRTAQFELEFGKGICRSSELFELGLKHKLVKKTGGAYYSFN 358
Query: 296 DRNFRGKEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDE--DSTEETVSTISP 353
++ F GK+A K FL +NE +EL ++LR + + Q A D D EETV P
Sbjct: 359 EQQFHGKDAVKSFLTKNEGAAKELEMELRRLIQTEPPRKQEAEDDMLGDLPEETV---RP 415
Query: 354 DSTDEE-AAAVVEA 366
++++EE AA++EA
Sbjct: 416 ETSEEEDLAAIIEA 429
>gi|125534156|gb|EAY80704.1| hypothetical protein OsI_35888 [Oryza sativa Indica Group]
Length = 430
Score = 496 bits (1278), Expect = e-138, Method: Compositional matrix adjust.
Identities = 258/371 (69%), Positives = 299/371 (80%), Gaps = 10/371 (2%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
+ KKD ALQQALDQI S+FG+ SIMWL S P+ VPV+STGSFALD+ALG GGLPKGRV
Sbjct: 65 IKKKDFALQQALDQIKSAFGEESIMWLNHSYGPKEVPVISTGSFALDMALGIGGLPKGRV 124
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
VEIYGPEASGKTTLALH+IAEAQ+ GGYC FIDAEHALDP+LAE+IGVK E+LLL+QPDC
Sbjct: 125 VEIYGPEASGKTTLALHIIAEAQKNGGYCAFIDAEHALDPTLAESIGVKAEHLLLSQPDC 184
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL L D LIRSGS+DVVVVDSVAALVPK ELDGEMGDAH+A+QARLMSQALRKLSHS
Sbjct: 185 GEQALGLADILIRSGSIDVVVVDSVAALVPKTELDGEMGDAHVALQARLMSQALRKLSHS 244
Query: 181 LSLSQTILIFINQVRAKLSTF-GFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETI 239
LS S+T+L+FINQVR+KLSTF GFG P EVTCGGNALKFYASVRLN KRIGL+KK EE +
Sbjct: 245 LSRSRTMLVFINQVRSKLSTFSGFGAPAEVTCGGNALKFYASVRLNTKRIGLIKKSEEVV 304
Query: 240 GSQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF 299
G+QI VKIVKNK APPFKT ELEFGKG+SRE EII+L KHKF +K+G + N +NF
Sbjct: 305 GTQIQVKIVKNKHAPPFKTVHLELEFGKGLSRELEIIELGFKHKFITKSGVFYHLNGQNF 364
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDS----TEETVSTISPDS 355
GK+A K +L EN++V E L+ ++E ++ P + D + TEE VS +
Sbjct: 365 HGKDALKCYLAENKNVLESLMSMIKESIMQQESHPDRNMEDANPDTSITEEFVS-----A 419
Query: 356 TDEEAAAVVEA 366
TDE+ VEA
Sbjct: 420 TDEQVPEEVEA 430
>gi|115485181|ref|NP_001067734.1| Os11g0302700 [Oryza sativa Japonica Group]
gi|62732800|gb|AAX94919.1| recA protein, putative [Oryza sativa Japonica Group]
gi|77550150|gb|ABA92947.1| recA protein, expressed [Oryza sativa Japonica Group]
gi|113644956|dbj|BAF28097.1| Os11g0302700 [Oryza sativa Japonica Group]
gi|125576944|gb|EAZ18166.1| hypothetical protein OsJ_33715 [Oryza sativa Japonica Group]
gi|215707257|dbj|BAG93717.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 430
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 257/371 (69%), Positives = 299/371 (80%), Gaps = 10/371 (2%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
+ KKD ALQQALDQI S+FG+ SIMWL S P+ VPV+STGSFALD+ALG GGLPKGRV
Sbjct: 65 IKKKDFALQQALDQIKSAFGEESIMWLNHSYGPKEVPVISTGSFALDMALGIGGLPKGRV 124
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
VEIYGPEASGKTTLALH+IAEAQ+ GGYC FIDAEHALDP+LAE+IGVK E+LLL+QPDC
Sbjct: 125 VEIYGPEASGKTTLALHIIAEAQKNGGYCAFIDAEHALDPTLAESIGVKAEHLLLSQPDC 184
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL L D LIRSGS+DVVVVDSVAALVPK ELDGEMGDAH+A+QARLMSQALRKLSHS
Sbjct: 185 GEQALGLADILIRSGSIDVVVVDSVAALVPKTELDGEMGDAHVALQARLMSQALRKLSHS 244
Query: 181 LSLSQTILIFINQVRAKLSTF-GFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETI 239
LS S+T+L+FINQVR+KLSTF GFG P EVTCGGNALKFYASVRLN KRIGL+KK EE +
Sbjct: 245 LSRSRTMLVFINQVRSKLSTFSGFGAPAEVTCGGNALKFYASVRLNTKRIGLIKKSEEVV 304
Query: 240 GSQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF 299
G+QI VKIVKNK APPFKT ELEFGKG+SRE EII++ KHKF +K+G + N +NF
Sbjct: 305 GTQIQVKIVKNKHAPPFKTVHLELEFGKGLSRELEIIEVGFKHKFITKSGVFYHLNGQNF 364
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDS----TEETVSTISPDS 355
GK+A K +L EN++V E L+ ++E ++ P + D + TEE VS +
Sbjct: 365 HGKDALKCYLAENKNVLESLMSMIKESIMQQESHPDRNMEDANPDTSITEEFVS-----A 419
Query: 356 TDEEAAAVVEA 366
TDE+ VEA
Sbjct: 420 TDEQVPEEVEA 430
>gi|148910572|gb|ABR18358.1| unknown [Picea sitchensis]
Length = 454
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 257/369 (69%), Positives = 300/369 (81%), Gaps = 10/369 (2%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
+S+K+ ALQ AL QI S+FGK ++MWLGR + R+VPV+STGS LD+ALG GG PKGR+
Sbjct: 92 LSEKEAALQAALSQIGSTFGKETVMWLGRFLGRRNVPVISTGSLNLDVALGIGGFPKGRM 151
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
VEIYGPEASGKTTL LH IAEAQR GGYCVFIDAEHALDPSLAE IGVKTENLLLAQPDC
Sbjct: 152 VEIYGPEASGKTTLGLHTIAEAQRNGGYCVFIDAEHALDPSLAEAIGVKTENLLLAQPDC 211
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQALSLVDT IRSGSVDV+VVDSVAALVPK EL+GEMGDAHMA+QARLMSQALRKL+ S
Sbjct: 212 GEQALSLVDTFIRSGSVDVIVVDSVAALVPKSELEGEMGDAHMAVQARLMSQALRKLTPS 271
Query: 181 LSLSQTILIFINQVRAKLSTF-GFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETI 239
LS SQT+LIFINQVR+KLS+F GFGGP+EVT GGNALKFYAS+RLNI+R GL+K+G+ET
Sbjct: 272 LSRSQTLLIFINQVRSKLSSFGGFGGPSEVTAGGNALKFYASIRLNIRRTGLLKRGDETF 331
Query: 240 GSQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF 299
GSQI VK+ KNKLAPPFKTA+FE+EFG+GIS E+EI+DL KH +K+G + N F
Sbjct: 332 GSQILVKVAKNKLAPPFKTAEFEIEFGRGISCEAEILDLGCKHDMITKSGHHYKLNGETF 391
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETVSTISPDSTDE- 358
GKE K +L EN+ +R EL+ KL+EKL+ D + ED E+ VS ++ DE
Sbjct: 392 NGKEKAKSYLRENDQIRYELMSKLKEKLLGD-------IGQEDVLEKDVSDTFSENNDEI 444
Query: 359 -EAAAVVEA 366
E AAV EA
Sbjct: 445 IETAAVAEA 453
>gi|20161605|dbj|BAB90525.1| putative RecA protein [Oryza sativa Japonica Group]
Length = 344
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 255/346 (73%), Positives = 295/346 (85%), Gaps = 6/346 (1%)
Query: 25 MWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASGKTTLALHVIAEAQR 84
MWLGRS R VPVVSTGSF+LD+ALGTGGLPKGRV+E+YGPEASGKTTLALHVIAEAQ+
Sbjct: 1 MWLGRSEGRREVPVVSTGSFSLDLALGTGGLPKGRVIEVYGPEASGKTTLALHVIAEAQK 60
Query: 85 QGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSLVDTLIRSGSVDVVVVDS 144
GGYC F+DAEHALDP+LAE+IGV T NLLL+QPDCGEQALSLVDTLIRSGSVDVVVVDS
Sbjct: 61 HGGYCAFVDAEHALDPALAESIGVNTSNLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDS 120
Query: 145 VAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFINQVRAKLSTF-GF 203
VAALVPK ELDGEMGDAH+A+QARLMSQALRKLSHSLSLSQTIL+FINQ+R+K++TF GF
Sbjct: 121 VAALVPKSELDGEMGDAHVALQARLMSQALRKLSHSLSLSQTILLFINQIRSKVTTFGGF 180
Query: 204 GGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVKIVKNKLAPPFKTAQFEL 263
GGP EVT GGNALKFYASVR+NIKRIGLVKKGEETIGSQ+ VKIVKNK APPFKTAQFEL
Sbjct: 181 GGPMEVTSGGNALKFYASVRMNIKRIGLVKKGEETIGSQVLVKIVKNKHAPPFKTAQFEL 240
Query: 264 EFGKGISRESEIIDLALKHKFASK-AGAMFTYNDRNFRGKEAFKQFLVENESVREELVIK 322
EFGKGI R SE+I+L LKHK K GA +++N+ ++RGK+A K +L ENES+ +EL
Sbjct: 241 EFGKGICRSSELIELGLKHKLVKKLGGAFYSFNEESYRGKDALKSYLNENESIAKELETN 300
Query: 323 LREKLVVDHKEPQTAVTD--EDSTEETVSTISPDSTDEEAAAVVEA 366
LR+ + + Q D D EE+++T + S++EE AAV+EA
Sbjct: 301 LRKLMETQAPKKQEDEGDFLSDLPEESLATET--SSEEELAAVIEA 344
>gi|449522309|ref|XP_004168169.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
[Cucumis sativus]
Length = 588
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 253/366 (69%), Positives = 302/366 (82%), Gaps = 4/366 (1%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
+SKK+LALQQAL QIT++FGKGSIMWLGRS + ++VPVVSTGSF+LD+ALG GG PKGRV
Sbjct: 128 LSKKELALQQALGQITTTFGKGSIMWLGRSASSKNVPVVSTGSFSLDMALGVGGFPKGRV 187
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+EIYGPEASGKTTLALHVIAE+Q+QGG CVF+DAEHA DP+LA+ IGV TENL L+QPDC
Sbjct: 188 IEIYGPEASGKTTLALHVIAESQKQGGSCVFVDAEHAFDPALAQAIGVNTENLYLSQPDC 247
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQALS VD+ IR GSVDVVVV++VAALVPKGE+DGEMGD MAMQARLM QALRKL HS
Sbjct: 248 GEQALSFVDSQIRRGSVDVVVVNNVAALVPKGEVDGEMGDTPMAMQARLMGQALRKLCHS 307
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
L LSQTILIFI+Q+R+K ST FGG VTC GNA+KFYASVRL + RIG VKKGEE IG
Sbjct: 308 LFLSQTILIFISQIRSKPST--FGGSEVVTCCGNAVKFYASVRLFVCRIGYVKKGEEVIG 365
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNFR 300
S++ VK+VKNKLAPPF+ AQFELE GKGI +ESEII L LK+KF S+A +++ ++ R+F
Sbjct: 366 SRVQVKVVKNKLAPPFRIAQFELERGKGICKESEIIILGLKYKFMSQAASLYRFHGRSFY 425
Query: 301 GKEAFKQFLVENESVREELVIKLREKLV-VDHKEPQTAVTDEDSTEETVSTISPDSTDEE 359
GKE+ K FL+E+E REEL+ KLREKL+ + +PQ E S +E V T P+S DE+
Sbjct: 426 GKESLKTFLLESEDAREELITKLREKLLDAEMGKPQNRDETEGSLQEDVIT-PPNSRDED 484
Query: 360 AAAVVE 365
A V+
Sbjct: 485 AVTAVK 490
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/123 (50%), Positives = 77/123 (62%), Gaps = 22/123 (17%)
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNFRGKE 303
AVK++KN PF+ QFEL+ GKGIS+ESEIIDLALK+KF +KAG+ F YN RNF GKE
Sbjct: 488 AVKVMKNNKHAPFRNVQFELKSGKGISKESEIIDLALKYKFITKAGSFFKYNGRNFHGKE 547
Query: 304 AFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETVSTISPDSTDEEAAAV 363
A K FL +NE VR+EL+ KL+E ++ PDSTDE+A
Sbjct: 548 ALKTFLSKNEDVRKELITKLQEYIIT----------------------PPDSTDEDAVTA 585
Query: 364 VEA 366
EA
Sbjct: 586 AEA 588
>gi|449446821|ref|XP_004141169.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
[Cucumis sativus]
Length = 541
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 253/366 (69%), Positives = 301/366 (82%), Gaps = 4/366 (1%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
+SKK+LALQQAL QIT++FGKGSIMWLGRS + ++VPVVSTGSF+LD+ALG GG PKGRV
Sbjct: 81 LSKKELALQQALGQITTTFGKGSIMWLGRSASSKNVPVVSTGSFSLDMALGVGGFPKGRV 140
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+EIYGPEASGKTTLALHVIAE Q+QGG CVF+DAEHA DP+LA+ IGV TENL L+QPDC
Sbjct: 141 IEIYGPEASGKTTLALHVIAETQKQGGSCVFVDAEHAFDPALAQAIGVNTENLYLSQPDC 200
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQALS VD+ IR GSVDVVVV++VAALVPKGE+DGEMGD MAMQARLM QALRKL HS
Sbjct: 201 GEQALSFVDSQIRRGSVDVVVVNNVAALVPKGEVDGEMGDTPMAMQARLMGQALRKLCHS 260
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
L LSQTILIFI+Q+R+K ST FGG VTC GNA+KFYASVRL + RIG VKKGEE IG
Sbjct: 261 LFLSQTILIFISQIRSKPST--FGGSEVVTCCGNAVKFYASVRLFVCRIGYVKKGEEVIG 318
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNFR 300
S++ VK+VKNKLAPPF+ AQFELE GKGI +ESEII L LK+KF S+A +++ ++ R+F
Sbjct: 319 SRVQVKVVKNKLAPPFRIAQFELERGKGICKESEIIILGLKYKFMSQAASLYRFHGRSFY 378
Query: 301 GKEAFKQFLVENESVREELVIKLREKLV-VDHKEPQTAVTDEDSTEETVSTISPDSTDEE 359
GKE+ K FL+E+E REEL+ KLREKL+ + +PQ E S +E V T P+S DE+
Sbjct: 379 GKESLKTFLLESEDAREELITKLREKLLDAEMGKPQNRDETEGSLQEDVIT-PPNSRDED 437
Query: 360 AAAVVE 365
A V+
Sbjct: 438 AVTAVK 443
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/123 (50%), Positives = 77/123 (62%), Gaps = 22/123 (17%)
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNFRGKE 303
AVK++KN PF+ QFEL+ GKGIS+ESEIIDLALK+KF +KAG+ F YN RNF GKE
Sbjct: 441 AVKVMKNNKHAPFRNVQFELKSGKGISKESEIIDLALKYKFITKAGSFFKYNGRNFHGKE 500
Query: 304 AFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETVSTISPDSTDEEAAAV 363
A K FL +NE VR+EL+ KL+E ++ PDSTDE+A
Sbjct: 501 ALKTFLSKNEDVRKELITKLQEYIIT----------------------PPDSTDEDAVTA 538
Query: 364 VEA 366
EA
Sbjct: 539 AEA 541
>gi|218189546|gb|EEC71973.1| hypothetical protein OsI_04810 [Oryza sativa Indica Group]
Length = 339
Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust.
Identities = 245/346 (70%), Positives = 283/346 (81%), Gaps = 11/346 (3%)
Query: 25 MWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASGKTTLALHVIAEAQR 84
MWLGRS R VPVVSTGSF+LD G RV+E+YGPEASGKTTLALHVIAEAQ+
Sbjct: 1 MWLGRSEGRREVPVVSTGSFSLDWHWELG-----RVIEVYGPEASGKTTLALHVIAEAQK 55
Query: 85 QGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSLVDTLIRSGSVDVVVVDS 144
GGYC F+DAEHALDP+LAE+IGV T NLLL+QPDCGEQALSLVDTLIRSGSVDVVVVDS
Sbjct: 56 HGGYCAFVDAEHALDPALAESIGVNTSNLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDS 115
Query: 145 VAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFINQVRAKLSTF-GF 203
VAALVPK EL GEMGDAH+A+QARLMSQALRKLSHSLSLSQTIL+FINQ+R+K++TF GF
Sbjct: 116 VAALVPKSELAGEMGDAHVALQARLMSQALRKLSHSLSLSQTILLFINQIRSKVTTFGGF 175
Query: 204 GGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVKIVKNKLAPPFKTAQFEL 263
GGP EVT GGNALKFYASVR+NIKRIGLVKKGEETIGSQ+ VKIVKNK APPFKTAQFEL
Sbjct: 176 GGPMEVTSGGNALKFYASVRMNIKRIGLVKKGEETIGSQVLVKIVKNKHAPPFKTAQFEL 235
Query: 264 EFGKGISRESEIIDLALKHKFASK-AGAMFTYNDRNFRGKEAFKQFLVENESVREELVIK 322
EFGKGI R SE+I+L LKHK K GA +++N+ ++RGK+A K +L ENES+ +EL
Sbjct: 236 EFGKGICRSSELIELGLKHKLVKKLGGAFYSFNEESYRGKDALKSYLNENESIAKELETN 295
Query: 323 LREKLVVDHKEPQTAVTD--EDSTEETVSTISPDSTDEEAAAVVEA 366
LR+ + + Q D D EE+++T S++EE AAV+EA
Sbjct: 296 LRKLMETQAPKKQEDEGDFLSDLPEESLAT--ETSSEEELAAVIEA 339
>gi|406916498|gb|EKD55510.1| hypothetical protein ACD_60C00004G0020 [uncultured bacterium]
Length = 347
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 200/347 (57%), Positives = 258/347 (74%), Gaps = 5/347 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGS+M LG + + R + V+STGS ALDIALG GGLP+GRVVEI
Sbjct: 5 KKKALGAALSQIERQFGKGSVMRLGDASSTRDIEVISTGSLALDIALGVGGLPRGRVVEI 64
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIA QRQGG F+DAEHALDP+ A+ +GV + LL++QPD GEQ
Sbjct: 65 YGPESSGKTTLTLQVIAACQRQGGTAAFVDAEHALDPAYAKRLGVNVDELLISQPDTGEQ 124
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RS +VD+VVVDSVAAL PK E++GEMGD+HM +QARLMSQALRKL+ ++
Sbjct: 125 ALEITDMLVRSSAVDIVVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKLTANIKR 184
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+R G VK G+E +GS+
Sbjct: 185 SNTLVIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRTGSVKNGDEVVGSET 242
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRGK 302
VK+VKNK+APPF+ A+F++ + +GISRE EII+L + H KAGA F+Y N R +GK
Sbjct: 243 RVKVVKNKVAPPFRQAEFDILYNEGISREGEIIELGVLHNLVDKAGAWFSYKNQRIGQGK 302
Query: 303 EAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETVS 349
+ + FL E++ + EE+ ++REKL+ H TA T+E+ EE +
Sbjct: 303 DNARIFLKEHKEIAEEIEKQIREKLL--HSVKSTAETNENEVEEATA 347
>gi|350564305|ref|ZP_08933123.1| recA protein [Thioalkalimicrobium aerophilum AL3]
gi|349777783|gb|EGZ32145.1| recA protein [Thioalkalimicrobium aerophilum AL3]
Length = 347
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 192/326 (58%), Positives = 248/326 (76%), Gaps = 3/326 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGSIM +G S R + +STGS LDIALG GGLPKGRV+EI
Sbjct: 5 KQKALAAALGQIEKQFGKGSIMRMGDSTASRDIEAISTGSLGLDIALGIGGLPKGRVIEI 64
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL LH IAEAQ++GG F+DAEHALDPS AE +GV +NLL++QPD GEQ
Sbjct: 65 YGPESSGKTTLTLHAIAEAQKKGGVAAFVDAEHALDPSYAEKLGVDVDNLLVSQPDTGEQ 124
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RSG VD+VV+DSVAAL PK E++G+MGD+HM +QARLMSQALRKL+ ++
Sbjct: 125 ALEIADMLVRSGGVDIVVIDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTANIKR 184
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
+ T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +KKGEE +G++
Sbjct: 185 TNTLVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAIKKGEEILGNET 242
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+GISRE EIIDL +K KAG+ ++YN +GK
Sbjct: 243 RVKVVKNKVAPPFKQVEFDILYGEGISREGEIIDLGVKEGLIDKAGSWYSYNGEKIGQGK 302
Query: 303 EAFKQFLVENESVREELVIKLREKLV 328
+ +Q+L +N +V E L +L+ +L+
Sbjct: 303 DNVRQYLKDNPAVSEGLQTELKARLL 328
>gi|78485933|ref|YP_391858.1| recA protein [Thiomicrospira crunogena XCL-2]
gi|123741557|sp|Q31F89.1|RECA_THICR RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|78364219|gb|ABB42184.1| RecA protein [Thiomicrospira crunogena XCL-2]
Length = 347
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 191/339 (56%), Positives = 254/339 (74%), Gaps = 5/339 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI FGKGSIM +G R + VSTGS LD+ALG GGLP+GRVVEI
Sbjct: 5 KKKALEAALGQIEKQFGKGSIMRMGDKGAIRDIDSVSTGSLGLDVALGIGGLPRGRVVEI 64
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL LH IAE Q+ GG F+DAEHALDP AE +GV +NLL++QPD GEQ
Sbjct: 65 YGPESSGKTTLTLHAIAEMQKMGGTAAFVDAEHALDPIYAEKLGVDIDNLLVSQPDTGEQ 124
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D+L+RSG+VD+V+VDSVAAL PK E++G+MGD+HM +QARLMSQALRKL+ ++
Sbjct: 125 ALEITDSLVRSGAVDIVIVDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTANIKR 184
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
+ T++IFINQ+R K+ FG P E T GGNALKFY+SVRL+I+RIG +KKG+E +G++
Sbjct: 185 TNTLVIFINQIRMKIGVM-FGNP-ETTTGGNALKFYSSVRLDIRRIGAIKKGDEILGNET 242
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK++PPFK +FE+ +G+GISRE E+IDL +K K KAGA ++Y + +GK
Sbjct: 243 RVKVVKNKVSPPFKQVEFEILYGQGISREGEVIDLGVKEKLIEKAGAWYSYQGQKIGQGK 302
Query: 303 EAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDE 341
+ +QFL +N + E L ++++E+L+ P+ TDE
Sbjct: 303 DNVRQFLKDNPDIYETLQVQIKERLMPKPNAPKA--TDE 339
>gi|334143598|ref|YP_004536754.1| protein recA [Thioalkalimicrobium cyclicum ALM1]
gi|333964509|gb|AEG31275.1| Protein recA [Thioalkalimicrobium cyclicum ALM1]
Length = 347
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 190/326 (58%), Positives = 247/326 (75%), Gaps = 3/326 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGSIM +G S PR + +STGS LDIALG GLPKGRV+EI
Sbjct: 5 KQKALAAALGQIEKQFGKGSIMRMGDSTAPRDIEAISTGSLGLDIALGIAGLPKGRVIEI 64
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL LH IAEAQ++GG F+DAEHALDPS AE +GV +NLL++QPD GEQ
Sbjct: 65 YGPESSGKTTLTLHAIAEAQKKGGVAAFVDAEHALDPSYAEKLGVDVDNLLVSQPDTGEQ 124
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RSG VD+VV+DSVAAL PK E++G+MGD+HM +QARLMSQALRKL+ ++
Sbjct: 125 ALEIADMLVRSGGVDIVVIDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTANIKR 184
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
+ T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +KKGEE +G++
Sbjct: 185 TNTLVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAIKKGEEILGNET 242
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+GISRE EIIDL +K K+G+ ++ N +GK
Sbjct: 243 RVKVVKNKVAPPFKQVEFDILYGEGISREGEIIDLGVKEGLIEKSGSWYSCNGEKIGQGK 302
Query: 303 EAFKQFLVENESVREELVIKLREKLV 328
+ +Q+L +N +V E L +L+ +L+
Sbjct: 303 DNARQYLKDNPAVSEGLQAELKARLL 328
>gi|347446589|dbj|BAK82138.1| recombination protein RecA [Calyptogena pacifica symbiont]
Length = 344
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 190/341 (55%), Positives = 260/341 (76%), Gaps = 3/341 (0%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
+K+ AL+ AL QI FGKGS+M+LG ++ VSTGS +LDIALG GGLP+GRV+E
Sbjct: 4 QKEQALKAALAQIDKQFGKGSVMFLGDDQAQSNIEAVSTGSLSLDIALGIGGLPRGRVIE 63
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL LHVIAE Q+ GG FIDAEHALDP A+ + V T++LL++QPD GE
Sbjct: 64 IYGPESSGKTTLTLHVIAEVQKLGGTAAFIDAEHALDPRYAKRLDVNTDDLLISQPDTGE 123
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L+RSG VD+VV+DSVAAL PK E++GEMG +HM +QARLMSQALRKL+ ++
Sbjct: 124 QALEITDMLVRSGGVDIVVIDSVAALAPKAEIEGEMGASHMGLQARLMSQALRKLTSNIK 183
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +KKG+ET+G++
Sbjct: 184 RTNTMVIFINQLRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAIKKGDETLGNE 241
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRG 301
VK++KNK+APPFK A+F++ + +GIS ESEIIDL +KH F KAGA ++ +R +G
Sbjct: 242 TRVKVLKNKVAPPFKQAEFQILYNEGISLESEIIDLGVKHGFVEKAGAWYSVEGERIGQG 301
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDED 342
K+ +++L N + +++ I++REKL+ + + V+++D
Sbjct: 302 KDNAREYLKSNPKLSQKIEIQIREKLLTKEADIEKDVSNQD 342
>gi|239787354|emb|CAX83831.1| Protein RecA [uncultured bacterium]
Length = 353
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 193/345 (55%), Positives = 258/345 (74%), Gaps = 7/345 (2%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL AL QI +FGKGS+M LG+ T ++ +STGS LD+ALG GGLPKGR++EI+GP
Sbjct: 9 ALDAALAQIERNFGKGSVMRLGQKDTSMNIESISTGSLGLDLALGIGGLPKGRIIEIFGP 68
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTTL LHVIAE Q++GG C F+DAEHALDPS A +GVKTE L+++QPD GEQAL
Sbjct: 69 ESSGKTTLTLHVIAECQKKGGICAFVDAEHALDPSYARKLGVKTEELIISQPDTGEQALE 128
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ DTL+RSG+VD++V+DSVAALVPK EL+G+MGD+HM +QARLMSQALRK++ S+S +
Sbjct: 129 IADTLVRSGAVDIIVIDSVAALVPKAELEGDMGDSHMGLQARLMSQALRKITGSISKTNC 188
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK EE +G+Q VK
Sbjct: 189 MVIFINQIRQKIGIV-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKDKEEIVGNQTRVK 246
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRGKEAF 305
+VKNK+APPF+T +F++ +G GIS+ EIID+ + K+G+ ++Y N++ +G+E
Sbjct: 247 VVKNKMAPPFRTVEFDVSYGSGISKTGEIIDMGVNVGLIEKSGSWYSYKNNKIGQGREVA 306
Query: 306 KQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETVST 350
K +L E+ V EL ++R K K P+ A D +EET +T
Sbjct: 307 KTYLKEHPDVARELEQQIRAKY---DKNPEAAFVI-DQSEETAAT 347
>gi|153206757|ref|ZP_01945598.1| protein RecA [Coxiella burnetii 'MSU Goat Q177']
gi|212218394|ref|YP_002305181.1| recombinase A [Coxiella burnetii CbuK_Q154]
gi|120577120|gb|EAX33744.1| protein RecA [Coxiella burnetii 'MSU Goat Q177']
gi|212012656|gb|ACJ20036.1| RecA [Coxiella burnetii CbuK_Q154]
Length = 343
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 193/346 (55%), Positives = 257/346 (74%), Gaps = 4/346 (1%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
M + AL AL QI FGKGS+M LG + V+STGS LDIALG GGLP+GR+
Sbjct: 1 MDNRSNALNAALSQIERQFGKGSVMRLGDPGLIPDIDVISTGSLGLDIALGVGGLPRGRI 60
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+EIYGPEASGKTTLAL IA QR GG F+DAEHALD A +GVK E+LL++QPD
Sbjct: 61 IEIYGPEASGKTTLALQTIASCQRMGGTAAFVDAEHALDAIYAGKLGVKVEDLLVSQPDT 120
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + D L+RSG+VD++V+DSVAAL PK E++G+MGD+HM +QARLMSQALRKL+ +
Sbjct: 121 GEQALEITDMLVRSGAVDLIVIDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTAN 180
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
+ S T++IFINQ+R K+ FG P E T GGNALKFY+SVRL+I+RIG++KKGEE +G
Sbjct: 181 IKKSNTLVIFINQIRMKIGVM-FGNP-ETTTGGNALKFYSSVRLDIRRIGVIKKGEEILG 238
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNF 299
S+ VK+VKNK+APPF+ +F++ +G GISRESE+IDL +K++ KAGA ++YN +R
Sbjct: 239 SETRVKVVKNKVAPPFRQVEFDILYGLGISRESELIDLGVKNELVEKAGAWYSYNGERIG 298
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTE 345
+GKE +QF +EN + E+ +LREKL + H++ + + ++ E
Sbjct: 299 QGKENVRQFFLENPKIAGEIETRLREKL-LPHRQGEKIAEEVNAAE 343
>gi|256822657|ref|YP_003146620.1| recA protein [Kangiella koreensis DSM 16069]
gi|256796196|gb|ACV26852.1| recA protein [Kangiella koreensis DSM 16069]
Length = 346
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 191/332 (57%), Positives = 248/332 (74%), Gaps = 3/332 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGSIM LG + R + +STGS LDIALG GGLPKGRVVEI
Sbjct: 5 KKKALGAALTQIERQFGKGSIMRLGDNSAARGIGTISTGSLGLDIALGIGGLPKGRVVEI 64
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL IA Q+ GG F+DAEHALDP+ AE +GV ++L+++QPD GEQ
Sbjct: 65 YGPESSGKTTLALQAIASCQKDGGTAAFVDAEHALDPTYAEKLGVNLDDLIVSQPDTGEQ 124
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RSG+VD+VVVDSVAAL PK E++GEMGD+HM +QARLMSQALRKL+ ++
Sbjct: 125 ALEITDMLVRSGAVDIVVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKLTANIKR 184
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T+ +FINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+G+E +G++
Sbjct: 185 SNTLCVFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGQIKQGDEIVGNET 242
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK A+F++ +G+G S E EI+D +KH K+GA ++YN +GK
Sbjct: 243 RVKVVKNKVAPPFKQAEFQILYGEGTSLEGEILDWGVKHDLVEKSGAWYSYNGNKIGQGK 302
Query: 303 EAFKQFLVENESVREELVIKLREKLVVDHKEP 334
+ QFL +N ++EE+ KLR +L+V K+P
Sbjct: 303 QNVIQFLKDNADIKEEIEGKLRSELLVTAKKP 334
>gi|85712116|ref|ZP_01043169.1| RecA recombinase [Idiomarina baltica OS145]
gi|85694106|gb|EAQ32051.1| RecA recombinase [Idiomarina baltica OS145]
Length = 360
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/338 (57%), Positives = 253/338 (74%), Gaps = 6/338 (1%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL AL QI FGKGSIM LG + T + VSTGS LD+ALG GGLP GRVVEIYGP
Sbjct: 8 ALDAALSQIERQFGKGSIMRLGDNQT-MDIASVSTGSLGLDVALGIGGLPFGRVVEIYGP 66
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTTL L VIAEAQ+ G C F+DAEHALDP AE +GV+ ++LL++QPD GEQAL
Sbjct: 67 ESSGKTTLTLQVIAEAQKAGKTCAFVDAEHALDPIYAEALGVRVDDLLVSQPDTGEQALE 126
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ D L+RSG+VDVV+VDSVAAL PK E++GEMGD+H+ +QARLMSQALRKL+ ++ S +
Sbjct: 127 ICDMLVRSGAVDVVIVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTSNIKKSNS 186
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
+ IFINQ+R K+ FG P E T GGNALKFY+SVRL+I+R G +K+G+E +G++ VK
Sbjct: 187 LCIFINQIRMKIGVM-FGNP-ETTTGGNALKFYSSVRLDIRRTGALKEGDEVVGNETRVK 244
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGKEAF 305
+VKNK+APPFK A F++ +G+GIS+E E++DL +KHK KAGA ++YN D+ +GK
Sbjct: 245 VVKNKVAPPFKEANFQIMYGRGISKEGELVDLGVKHKLVDKAGAWYSYNGDKIGQGKANA 304
Query: 306 KQFLVENESVREELVIKLREKLVVD--HKEPQTAVTDE 341
+FL EN S+ EE+ KLRE L+V K+ A D+
Sbjct: 305 MKFLQENSSIAEEIESKLRELLLVKPAKKDKNEAAADD 342
>gi|29654363|ref|NP_820055.1| recombinase A [Coxiella burnetii RSA 493]
gi|154707523|ref|YP_001424368.1| recombinase A [Coxiella burnetii Dugway 5J108-111]
gi|161830332|ref|YP_001596675.1| recombinase A [Coxiella burnetii RSA 331]
gi|165918533|ref|ZP_02218619.1| protein RecA [Coxiella burnetii Q321]
gi|212212529|ref|YP_002303465.1| recombinase A [Coxiella burnetii CbuG_Q212]
gi|37537929|sp|Q83CQ4.1|RECA_COXBU RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|29541630|gb|AAO90569.1| RecA [Coxiella burnetii RSA 493]
gi|154356809|gb|ABS78271.1| RecA [Coxiella burnetii Dugway 5J108-111]
gi|161762199|gb|ABX77841.1| protein RecA [Coxiella burnetii RSA 331]
gi|165917779|gb|EDR36383.1| protein RecA [Coxiella burnetii Q321]
gi|212010939|gb|ACJ18320.1| RecA [Coxiella burnetii CbuG_Q212]
Length = 343
Score = 392 bits (1008), Expect = e-107, Method: Compositional matrix adjust.
Identities = 193/346 (55%), Positives = 256/346 (73%), Gaps = 4/346 (1%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
M + AL AL QI FGKGS+M LG + V+STGS LDIALG GGLP+GR+
Sbjct: 1 MDNRSNALNAALSQIERQFGKGSVMRLGDPGLIPDIDVISTGSLGLDIALGVGGLPRGRI 60
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+EIYGPEASGKTTLAL IA QR GG F+DAEHALD A +GVK E+LL++QPD
Sbjct: 61 IEIYGPEASGKTTLALQTIASCQRMGGTAAFVDAEHALDAIYAGKLGVKVEDLLVSQPDT 120
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + D L+RSG+VD++V+DSVAAL PK E++G+MGD+HM +QARLMSQALRKL+ +
Sbjct: 121 GEQALEITDMLVRSGAVDLIVIDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTAN 180
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
+ S T++IFINQ+R K+ FG P E T GGNALKFY+SVRL+I+RIG +KKGEE +G
Sbjct: 181 IKKSNTLVIFINQIRMKIGVM-FGNP-ETTTGGNALKFYSSVRLDIRRIGAIKKGEEILG 238
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNF 299
S+ VK+VKNK+APPF+ +F++ +G GISRESE+IDL +K++ KAGA ++YN +R
Sbjct: 239 SETRVKVVKNKVAPPFRQVEFDILYGLGISRESELIDLGVKNELVEKAGAWYSYNGERIG 298
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTE 345
+GKE +QF +EN + E+ +LREKL + H++ + + ++ E
Sbjct: 299 QGKENVRQFFLENPKIAGEIETRLREKL-LPHRQGEKIAEEVNAAE 343
>gi|395786463|ref|ZP_10466190.1| protein recA [Bartonella tamiae Th239]
gi|423716644|ref|ZP_17690834.1| protein recA [Bartonella tamiae Th307]
gi|395422761|gb|EJF88957.1| protein recA [Bartonella tamiae Th239]
gi|395428718|gb|EJF94793.1| protein recA [Bartonella tamiae Th307]
Length = 360
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/324 (59%), Positives = 245/324 (75%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI SFGKGSIM LG++ + + TGS +LDIALG GGLPKGR+VEI
Sbjct: 16 KSKALDAALSQIERSFGKGSIMRLGQNEQVVEIETIPTGSLSLDIALGVGGLPKGRIVEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH IAEAQ++GG C FIDAEHALDP A +GV ENLL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALHTIAEAQKRGGICAFIDAEHALDPVYARKLGVDLENLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+VVDSVAAL P+ E+DGEMGD+ +QARLMSQALRKL+ S++
Sbjct: 136 ALEITDTLVRSGAVDVLVVDSVAALTPRAEIDGEMGDSLPGLQARLMSQALRKLTASIAR 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K +E +G+Q
Sbjct: 196 SNTMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAIKDRDEVVGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G+G+S+ E+IDL +K K+GA F+YN + +G+
Sbjct: 254 RVKVVKNKLAPPFKQVEFDIMYGEGVSKLGELIDLGVKAGVVEKSGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E KQFL N+ V +E+ LR+
Sbjct: 314 ENAKQFLRANKEVADEIETTLRQN 337
>gi|347446582|dbj|BAK82133.1| recombination protein RecA [Calyptogena fossajaponica symbiont]
Length = 344
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 191/343 (55%), Positives = 259/343 (75%), Gaps = 3/343 (0%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
+K AL+ AL QI FGKGS+++LG + VVSTGS +LDIALG GGLP+GRVVE
Sbjct: 4 QKKQALKAALAQIDKQFGKGSVIFLGDDQAQSDIEVVSTGSLSLDIALGIGGLPRGRVVE 63
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL LHVIAE Q+ GG FIDAEHALDP A+ +GV T++LL++QPD GE
Sbjct: 64 IYGPESSGKTTLTLHVIAEVQKLGGIAAFIDAEHALDPKYAKCLGVNTDDLLISQPDTGE 123
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L+RSGSVD+VV+DSVAAL PK E++GEMG +HM +QARLMSQALRKL+ ++
Sbjct: 124 QALEITDMLVRSGSVDIVVIDSVAALTPKAEIEGEMGASHMGLQARLMSQALRKLTSNIK 183
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +KKG+E +G++
Sbjct: 184 RTNTMVIFINQLRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAIKKGDEILGNE 241
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRG 301
VK++KNK+APPFK A+F++ + +GIS ESEIIDL +KH F KAGA ++ +R +G
Sbjct: 242 TRVKVLKNKVAPPFKQAEFQILYNEGISLESEIIDLGVKHGFVEKAGAWYSVEGERIGQG 301
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDST 344
K+ +++L N + +++ ++REKL+ + V+++D+
Sbjct: 302 KDNAREYLKANPELSQKIETQIREKLLAKESGIEKDVSNQDTN 344
>gi|292491237|ref|YP_003526676.1| recA protein [Nitrosococcus halophilus Nc4]
gi|291579832|gb|ADE14289.1| recA protein [Nitrosococcus halophilus Nc4]
Length = 342
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 190/323 (58%), Positives = 248/323 (76%), Gaps = 3/323 (0%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL AL QI FGKG++M LG + T R V V+STGS LDIALG GGLP+GRVVEI+GP
Sbjct: 8 ALGAALSQIEKQFGKGAVMRLGDANTVRGVEVISTGSLGLDIALGVGGLPRGRVVEIFGP 67
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
EASGKTTLAL V+AEAQ+ GG F+DAEHALDP AE +GV ++LL++QPD GEQAL
Sbjct: 68 EASGKTTLALQVVAEAQKVGGTAAFVDAEHALDPQYAEKLGVNVDDLLVSQPDTGEQALE 127
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ D L+RSG+VDVVV+DSVAAL PK E++GEMGD+H+ +QARLMSQALRKL+ ++ S T
Sbjct: 128 IADMLVRSGAVDVVVIDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKRSNT 187
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
+++FINQ+R K+ FG P E T GGNALKFYASVRL+I+R+G +KKGEE +G++ VK
Sbjct: 188 LVVFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRVGSLKKGEEIVGNETRVK 245
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGKEAF 305
IVKNK+APPFK F++ +G G+SRE EIIDL ++ K GA ++YN DR +G++
Sbjct: 246 IVKNKVAPPFKQISFDILYGSGVSREGEIIDLGVQEGLVQKTGAWYSYNGDRIGQGRDNV 305
Query: 306 KQFLVENESVREELVIKLREKLV 328
+QFL E++ + + + +REKL+
Sbjct: 306 RQFLKEHQELAQGIEASIREKLL 328
>gi|335043023|ref|ZP_08536050.1| recA/RadA recombinase [Methylophaga aminisulfidivorans MP]
gi|333789637|gb|EGL55519.1| recA/RadA recombinase [Methylophaga aminisulfidivorans MP]
Length = 346
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 192/346 (55%), Positives = 254/346 (73%), Gaps = 7/346 (2%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGS+M LG + R V VS+GS LDIALG GGLP+GR+VEI
Sbjct: 5 KKKALGAALGQIEKQFGKGSVMRLGDNAAARDVSAVSSGSIGLDIALGIGGLPRGRIVEI 64
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL LH IAE Q+ GG F+DAEHALDP AE +GV ++LL++QPD GEQ
Sbjct: 65 YGPESSGKTTLTLHAIAEMQKLGGTAAFVDAEHALDPVYAEKLGVNIDDLLVSQPDTGEQ 124
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RSG+VD+VVVDSVAAL PK E++G+MGD+HM +QARLMSQALRKL+ ++
Sbjct: 125 ALEITDMLVRSGAVDIVVVDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTANIKR 184
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +KKG+E +G++
Sbjct: 185 SNTLVIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAIKKGDEILGNET 242
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYND-RNFRGK 302
VK+VKNK+APPFK +F++ +G+GISRE E+IDL ++ K+GA ++YN R +GK
Sbjct: 243 RVKVVKNKVAPPFKQVEFDIMYGEGISREGELIDLGVQQNIVEKSGAWYSYNGTRIGQGK 302
Query: 303 EAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETV 348
+ + +L EN + E+ K+RE ++ +TA D+ + E+ V
Sbjct: 303 DNVRGYLKENPEMSAEIESKIRETML----PKKTAKKDDSAVEDDV 344
>gi|408378032|ref|ZP_11175631.1| recombinase A [Agrobacterium albertimagni AOL15]
gi|407748146|gb|EKF59663.1| recombinase A [Agrobacterium albertimagni AOL15]
Length = 362
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 191/323 (59%), Positives = 248/323 (76%), Gaps = 3/323 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI SFGKGSIM LG + + V VSTGS +LDIALG GGLPKGR++EI
Sbjct: 16 KSKALEAALSQIERSFGKGSIMKLGANESVVEVETVSTGSLSLDIALGIGGLPKGRIIEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL IAEAQ++GG C F+DAEHALDP A +GV +NLL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+VVDSVAAL P+ E++GEMGD+ MQARLMSQALRKL+ S+S
Sbjct: 136 ALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGMQARLMSQALRKLTASISK 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK EE +G+Q
Sbjct: 196 SKTMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAVKDREEVVGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 254 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLRE 325
E K FL +N +V +E+ + LR+
Sbjct: 314 ENAKLFLRDNPAVSQEIEMALRQ 336
>gi|444921804|ref|ZP_21241634.1| Protein RecA [Wohlfahrtiimonas chitiniclastica SH04]
gi|444507077|gb|ELV07259.1| Protein RecA [Wohlfahrtiimonas chitiniclastica SH04]
Length = 350
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 191/340 (56%), Positives = 248/340 (72%), Gaps = 3/340 (0%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
ALQ AL QI FGKGS+M G + VSTGS LDIALG GGLP+GR++EIYGP
Sbjct: 8 ALQAALGQIDKQFGKGSVMRFGDQTENTDIIPVSTGSLGLDIALGIGGLPRGRIIEIYGP 67
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTTL LH IAEAQ+ GG FIDAEHALDP A +GV ENL ++QPD GEQAL
Sbjct: 68 ESSGKTTLTLHAIAEAQKAGGMAAFIDAEHALDPVYAAKLGVDVENLYISQPDNGEQALE 127
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ DTL+RSG++D+VV+DSVAAL PK E++G+MGD+HM +QARLMSQALRKL+ ++ S T
Sbjct: 128 IADTLVRSGALDIVVIDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTANIKKSNT 187
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +KKG+E IG++ VK
Sbjct: 188 LVIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGSIKKGDEVIGAETRVK 245
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGKEAF 305
+VKNK++PPFK +F++ +G+GISR EIIDLA+K K+G+ ++Y D+ +GKE
Sbjct: 246 VVKNKVSPPFKQTEFDIMYGEGISRVGEIIDLAVKADIIEKSGSWYSYGDKRIGQGKENV 305
Query: 306 KQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTE 345
KQFL +N + + + ++RE + + TDED E
Sbjct: 306 KQFLKDNADIAQTIENQVREYFLARPLDGIMLATDEDGFE 345
>gi|77164441|ref|YP_342966.1| DNA recombination protein RecA [Nitrosococcus oceani ATCC 19707]
gi|254433644|ref|ZP_05047152.1| protein RecA [Nitrosococcus oceani AFC27]
gi|76882755|gb|ABA57436.1| RecA protein [Nitrosococcus oceani ATCC 19707]
gi|207089977|gb|EDZ67248.1| protein RecA [Nitrosococcus oceani AFC27]
Length = 342
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/337 (57%), Positives = 252/337 (74%), Gaps = 6/337 (1%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL AL QI FGKG++M LG + R V V+STGS LDIALG GGLP+GRVVEI+GP
Sbjct: 8 ALGAALSQIEKQFGKGAVMRLGDASIVREVEVISTGSLGLDIALGVGGLPRGRVVEIFGP 67
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
EASGKTTLAL V AEAQ GG F+DAEHALDP AE +GV E+LL++QPD GEQAL
Sbjct: 68 EASGKTTLALQVAAEAQALGGTAAFVDAEHALDPQYAERLGVSVEDLLVSQPDTGEQALE 127
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ D L+RSG+VDVVV+DSVAAL PK E++GEMGD+H+ +QARLMSQALRKL+ ++ S T
Sbjct: 128 IADMLVRSGAVDVVVIDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKRSNT 187
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+R+G +KKG+E +G++ VK
Sbjct: 188 LVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRVGALKKGDEIVGNETRVK 245
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGKEAF 305
+VKNK+APPFK F++ +G G+SRE EIIDL ++ F KAGA ++YN +R +G++
Sbjct: 246 VVKNKMAPPFKQVSFDILYGSGVSREGEIIDLGVREGFIEKAGAWYSYNGERIGQGRDNV 305
Query: 306 KQFLVENESVREELVIKLREKLVVDH---KEPQTAVT 339
+QFL E+ + + + +REKL+ +E Q AVT
Sbjct: 306 RQFLKEHRELAQGIEAHIREKLLPGKAALEEVQEAVT 342
>gi|347758444|ref|YP_004866006.1| protein RecA [Micavibrio aeruginosavorus ARL-13]
gi|347590962|gb|AEP10004.1| protein RecA [Micavibrio aeruginosavorus ARL-13]
Length = 383
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/365 (53%), Positives = 269/365 (73%), Gaps = 8/365 (2%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVV 61
++K AL AL QI +FGKGSIM L P V VSTGS LDIALG GGLP+GR++
Sbjct: 14 AEKTKALDAALAQIERAFGKGSIMKLTGDSNPMQVEAVSTGSLGLDIALGIGGLPRGRII 73
Query: 62 EIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCG 121
E++GPE+SGKTTLAL VIAEAQ+ GG C +DAEHALDPS A+ +GV ++LL++QPD G
Sbjct: 74 EVFGPESSGKTTLALQVIAEAQKAGGTCAIVDAEHALDPSYAKKLGVNIDDLLISQPDTG 133
Query: 122 EQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSL 181
EQAL + DTL+RSG++DV+V+DSVAALVP+ EL+GEMGD+H+ +QARLMSQALRK++ S+
Sbjct: 134 EQALEIADTLVRSGALDVLVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKITGSI 193
Query: 182 SLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGS 241
S S+TI+IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K E +G+
Sbjct: 194 SRSRTIVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGTIKDKENPVGN 251
Query: 242 QIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-R 300
Q VK+VKNK+APPF+ +F++ FG+GIS+ E+IDL ++ K+GA F+Y+ + +
Sbjct: 252 QTRVKVVKNKMAPPFRQVEFDIMFGEGISKMGELIDLGVQGNLVEKSGAWFSYDGQRIGQ 311
Query: 301 GKEAFKQFLVENESVREELVIKLREK--LVVDHK--EPQTAVTDEDSTEETVSTISPDST 356
G+E KQF+ +N V +L ++R K +V D P +A D+T + V+ + D++
Sbjct: 312 GRENAKQFMRDNPEVAAKLENEIRTKAGVVADAMLVGPDSAEEASDATMDAVND-TVDAS 370
Query: 357 DEEAA 361
D++AA
Sbjct: 371 DDDAA 375
>gi|269469106|gb|EEZ80654.1| RecA/RadA recombinase [uncultured SUP05 cluster bacterium]
Length = 335
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 191/329 (58%), Positives = 253/329 (76%), Gaps = 3/329 (0%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
+K AL+ AL QI FGKGS+M+LG + VSTGS +LDIALG GGLP+GRVVE
Sbjct: 4 QKKQALKAALAQIDKQFGKGSVMFLGDENAHADIEAVSTGSLSLDIALGIGGLPRGRVVE 63
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL LHVIAE Q+ GG FIDAEHALDP A+ +GV T++LL++QPD GE
Sbjct: 64 IYGPESSGKTTLTLHVIAEMQKLGGTAAFIDAEHALDPQYAKRLGVNTDDLLISQPDTGE 123
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L+RSGSVD+VV+DSVAAL PK E++GEMG +HM +QARLMSQALRKL+ ++
Sbjct: 124 QALEITDMLVRSGSVDIVVIDSVAALTPKAEIEGEMGASHMGLQARLMSQALRKLTSNIK 183
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +KKG+E +G++
Sbjct: 184 KTNTMVIFINQLRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAIKKGDEILGNE 241
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRG 301
VK++KNK+APPFK A+F++ + +GISRESEIIDL +K F KAGA ++ +R +G
Sbjct: 242 TRVKVLKNKVAPPFKQAEFQILYNQGISRESEIIDLGVKLGFVEKAGAWYSVEGERIGQG 301
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVD 330
K+ + +L+E+ + +++ K+REKL+ D
Sbjct: 302 KDNARDYLIEHAELSQKIEGKIREKLMSD 330
>gi|289208783|ref|YP_003460849.1| recA protein [Thioalkalivibrio sp. K90mix]
gi|288944414|gb|ADC72113.1| recA protein [Thioalkalivibrio sp. K90mix]
Length = 348
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/336 (57%), Positives = 254/336 (75%), Gaps = 6/336 (1%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL AL QI FGKG++M +G VP +STGS ALDIALG GG+P+GRVVEIYGP
Sbjct: 8 ALTAALGQIERQFGKGAVMRMGDQ-QAVDVPAISTGSLALDIALGIGGVPRGRVVEIYGP 66
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTTL L V+AEAQ+ GG F+DAEHALDP+ AE +GV ++LL++QPD GEQAL
Sbjct: 67 ESSGKTTLTLQVVAEAQKLGGTAAFVDAEHALDPTYAEKLGVNVDDLLVSQPDTGEQALE 126
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ D L+RSG+VDVV+VDSVAAL PK E++GEMGD+H+ +QARLMSQALRKL+ ++ S T
Sbjct: 127 IADMLVRSGAVDVVIVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKRSNT 186
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
++IFINQ+R K+ FG P E T GGNALKFY+SVR++I+RIG +KKG+E IG++ VK
Sbjct: 187 LVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYSSVRMDIRRIGAIKKGDEVIGNETRVK 244
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGKEAF 305
+VKNK+APPF+ A FE+ +G+GISR EII++ +K KAGA ++YN +R +GKE
Sbjct: 245 VVKNKMAPPFREAYFEILYGEGISRVGEIIEMGVKEGLIDKAGAWYSYNGERIGQGKENA 304
Query: 306 KQFLVENESVREELVIKLREKLVVDHKEPQTAVTDE 341
+Q+L +N + EE+ LRE+L+ K + AV DE
Sbjct: 305 RQYLKDNPQIAEEVEKTLRERLL--PKRNKAAVEDE 338
>gi|144900462|emb|CAM77326.1| RecA bacterial DNA recombination protein [Magnetospirillum
gryphiswaldense MSR-1]
Length = 358
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 191/319 (59%), Positives = 247/319 (77%), Gaps = 4/319 (1%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL+ A+ QI +FGKGSIM +G+ T VVSTGS LDIALG GGLP+GR++EIYGP
Sbjct: 19 ALEAAVSQIERAFGKGSIMKMGQKETV-ETEVVSTGSLGLDIALGIGGLPRGRIIEIYGP 77
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTTLALHV+AEAQ++GG C FIDAEHALDPS A +GV ++LL++QPD GEQAL
Sbjct: 78 ESSGKTTLALHVLAEAQKKGGTCAFIDAEHALDPSYARKLGVNLDDLLISQPDAGEQALE 137
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ DTL+RSG+VDV+VVDSVAALVP+ EL+GEMGD+H+ + ARLMSQALRKL+ S+S S+T
Sbjct: 138 ICDTLVRSGAVDVLVVDSVAALVPRAELEGEMGDSHVGLHARLMSQALRKLTGSVSKSKT 197
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
I+IFINQ+R K+ FG P E T GGNALKFYASVR+ I+R+G +K +E +G+Q VK
Sbjct: 198 IVIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRMEIRRVGAIKDRDEVVGNQTRVK 255
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYND-RNFRGKEAF 305
+VKNKLAPPFK F++ +G+GIS+ E+IDL +K K+GA F+YN R +G+E
Sbjct: 256 VVKNKLAPPFKVVDFDIMYGEGISKTGELIDLGVKANVVEKSGAWFSYNSTRVGQGRENA 315
Query: 306 KQFLVENESVREELVIKLR 324
KQFL +N ++ E+ +R
Sbjct: 316 KQFLRDNPAMAGEIEATIR 334
>gi|418937705|ref|ZP_13491312.1| Protein recA [Rhizobium sp. PDO1-076]
gi|375055572|gb|EHS51813.1| Protein recA [Rhizobium sp. PDO1-076]
Length = 361
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 190/323 (58%), Positives = 248/323 (76%), Gaps = 3/323 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI SFGKGSIM LG + + V VSTGS +LDIALG GGLPKGR++EI
Sbjct: 16 KSKALEAALSQIERSFGKGSIMKLGANESVVEVETVSTGSLSLDIALGIGGLPKGRIIEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL IAEAQ++GG C F+DAEHALDP A +GV +NLL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+V+DSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 136 ALEITDTLVRSGAVDVLVIDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK EE +G+Q
Sbjct: 196 SKTMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAVKDREEVVGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E++DL +K KAGA F+YN + +G+
Sbjct: 254 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKAGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLRE 325
E K FL +N ++ +E+ + LR+
Sbjct: 314 ENAKLFLRDNPALAQEIELALRQ 336
>gi|338738241|ref|YP_004675203.1| recombinase A [Hyphomicrobium sp. MC1]
gi|337758804|emb|CCB64629.1| recombinase A [Hyphomicrobium sp. MC1]
Length = 377
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/364 (55%), Positives = 265/364 (72%), Gaps = 7/364 (1%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
M KK AL+QAL QI +FGKGSIM LG + + +STGS LDIALG GGLPKGR+
Sbjct: 14 MDKKQ-ALEQALAQIDKTFGKGSIMRLGAN-EKLDIEAISTGSLGLDIALGIGGLPKGRI 71
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+E+YGPE+SGKTTLAL VIAE+Q++GG C F+DAEHA+DP A+ +GVK E+LL++QPD
Sbjct: 72 IEVYGPESSGKTTLALQVIAESQKKGGVCAFVDAEHAIDPGYAKKLGVKVEDLLISQPDT 131
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + DTL+RSG++DV+VVDSVAAL PK EL+GEMG+A M QARLMSQALRKL+ S
Sbjct: 132 GEQALEIADTLVRSGAIDVLVVDSVAALTPKAELEGEMGEATMGAQARLMSQALRKLTAS 191
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
+S + T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+ EET+G
Sbjct: 192 ISRANTMVIFINQIRMKIGIM-FGNP-ETTTGGNALKFYASVRLDIRRIGQIKEREETVG 249
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNF 299
+Q VK+VKNK+APPFK +F++ +G+GIS+ E+IDL +K K+GA +YN DR
Sbjct: 250 NQTRVKVVKNKVAPPFKQVEFDIMYGEGISKVGELIDLGVKAGLVEKSGAWLSYNGDRIG 309
Query: 300 RGKEAFKQFLVENESVREEL--VIKLREKLVVDHKEPQTAVTDEDSTEETVSTISPDSTD 357
+G+E K +L EN V E+ I+ L+V+ V ++D E + PD +
Sbjct: 310 QGRENAKTYLKENPRVAAEIERAIRANAGLIVEKMLANPEVGEDDGEEPDEDGVLPDESG 369
Query: 358 EEAA 361
++ A
Sbjct: 370 KKVA 373
>gi|352081858|ref|ZP_08952700.1| recA protein [Rhodanobacter sp. 2APBS1]
gi|389796541|ref|ZP_10199593.1| recombinase A [Rhodanobacter sp. 116-2]
gi|351682764|gb|EHA65860.1| recA protein [Rhodanobacter sp. 2APBS1]
gi|388448465|gb|EIM04449.1| recombinase A [Rhodanobacter sp. 116-2]
Length = 345
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/340 (57%), Positives = 250/340 (73%), Gaps = 4/340 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKG++M +G V + +STGS LDIALG GGLP+GRVVE
Sbjct: 4 NKRKALTSALGQIEKQFGKGAVMRMGDRVN-EAIETISTGSLGLDIALGVGGLPRGRVVE 62
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTT+ L IA QR GG FIDAEHALDP+ AE +GVK ++LL++QPD GE
Sbjct: 63 IYGPESSGKTTMTLQAIASCQRAGGTAAFIDAEHALDPTYAEKLGVKVDDLLVSQPDTGE 122
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L+RSG+VD+VVVDSVAAL PK E++GEMGD+H+ + ARLMSQALRKL+ ++
Sbjct: 123 QALEIADMLVRSGAVDMVVVDSVAALTPKAEIEGEMGDSHVGLHARLMSQALRKLTANIK 182
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VKKGEE IGS+
Sbjct: 183 KSGCLVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAVKKGEEIIGSE 240
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+APPF+ +FE+ +G+G SRE EII+L + K+GA ++YN DR +G
Sbjct: 241 TRVKVVKNKVAPPFRQCEFEILYGEGTSREGEIIELGVAQNLIDKSGAWYSYNGDRIGQG 300
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDE 341
KE +QFL +N ++ E+ +LRE+L+V +P A +E
Sbjct: 301 KENVRQFLRDNPAIANEIDKQLRERLLVPVGKPAPAAPEE 340
>gi|398353909|ref|YP_006399373.1| protein RecA [Sinorhizobium fredii USDA 257]
gi|390129235|gb|AFL52616.1| protein RecA [Sinorhizobium fredii USDA 257]
Length = 361
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 195/331 (58%), Positives = 247/331 (74%), Gaps = 5/331 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI SFGKGSIM LG + + VSTGS LDIALG GGLPKGRV+EI
Sbjct: 16 KSKALEAALSQIERSFGKGSIMKLGSKDSVVEIETVSTGSLGLDIALGIGGLPKGRVIEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL IAEAQ++GG C F+DAEHALDP A +GV ENLL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALQTIAEAQKKGGICGFVDAEHALDPIYARKLGVDLENLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+VVDSVAALVP+ E++GEMGD+ MQARLMSQALRKL+ S+S
Sbjct: 136 ALEITDTLVRSGAIDVLVVDSVAALVPRAEIEGEMGDSLPGMQARLMSQALRKLTASISK 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+ EE +G+Q
Sbjct: 196 SNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSVKEREEVVGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E+IDL +K K+GA F+YN + +G+
Sbjct: 254 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELIDLGVKAGIVEKSGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK--LVVDH 331
E K FL EN + E+ + LR+ L+ D
Sbjct: 314 ENAKLFLRENPDLAREIEMSLRQNAGLIADR 344
>gi|300113490|ref|YP_003760065.1| recA protein [Nitrosococcus watsonii C-113]
gi|299539427|gb|ADJ27744.1| recA protein [Nitrosococcus watsonii C-113]
Length = 342
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 189/323 (58%), Positives = 245/323 (75%), Gaps = 3/323 (0%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL AL QI FGKG++M LG + R V V+STGS LDIALG GGLP+GRVVEI+GP
Sbjct: 8 ALGAALSQIEKQFGKGAVMRLGDASIVREVEVISTGSLGLDIALGVGGLPRGRVVEIFGP 67
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
EASGKTTLAL V AEAQ GG F+DAEHALDP AE +GV E+LL++QPD GEQAL
Sbjct: 68 EASGKTTLALQVAAEAQALGGTAAFVDAEHALDPQYAERLGVNVEDLLVSQPDTGEQALE 127
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ D L+RSG+VDVVV+DSVAAL PK E++GEMGD+H+ +QARLMSQALRKL+ ++ S T
Sbjct: 128 IADMLVRSGAVDVVVIDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKRSNT 187
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+R+G +KKG+E +G++ VK
Sbjct: 188 LVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRVGALKKGDEIVGNETRVK 245
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRGKEAF 305
+VKNK+APPFK F++ +G G+SRE EIIDL ++ KAGA ++Y +R +G++
Sbjct: 246 VVKNKMAPPFKQVSFDILYGSGVSREGEIIDLGVREGLIEKAGAWYSYKGERIGQGRDNV 305
Query: 306 KQFLVENESVREELVIKLREKLV 328
+QFL E+ + +E+ +REKL+
Sbjct: 306 RQFLKEHRDIAQEIEAHIREKLL 328
>gi|222086163|ref|YP_002544695.1| recombinase A [Agrobacterium radiobacter K84]
gi|254790417|sp|B9JFS7.1|RECA_AGRRK RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|221723611|gb|ACM26767.1| recombinase A protein [Agrobacterium radiobacter K84]
Length = 361
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/362 (54%), Positives = 257/362 (70%), Gaps = 20/362 (5%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI SFGKGSIM LG + + VSTGS +LDIALG GGLPKGR+VEI
Sbjct: 16 KSKALEAALSQIERSFGKGSIMKLGSNENVVEIETVSTGSLSLDIALGIGGLPKGRIVEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL IAEAQ++GG C F+DAEHALDP A +GV +NLL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 136 ALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+ EE +G+Q
Sbjct: 196 SNTMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAVKEREEVVGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 254 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK--LVVDHKEPQTAVTDEDSTEETVSTISPDSTDEEA 360
E K FL +N + E+ + LR+ L+ D + PD+ D EA
Sbjct: 314 ENAKLFLRDNPDLAREIELSLRQNAGLIADR---------------FLQNGGPDADDGEA 358
Query: 361 AA 362
AA
Sbjct: 359 AA 360
>gi|398380107|ref|ZP_10538225.1| protein RecA [Rhizobium sp. AP16]
gi|397721423|gb|EJK81971.1| protein RecA [Rhizobium sp. AP16]
Length = 348
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/362 (54%), Positives = 257/362 (70%), Gaps = 20/362 (5%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI SFGKGSIM LG + + VSTGS +LDIALG GGLPKGR+VEI
Sbjct: 3 KSKALEAALSQIERSFGKGSIMKLGSNENVVEIETVSTGSLSLDIALGIGGLPKGRIVEI 62
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL IAEAQ++GG C F+DAEHALDP A +GV +NLL++QPD GEQ
Sbjct: 63 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 122
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 123 ALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 182
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+ EE +G+Q
Sbjct: 183 SNTMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAVKEREEVVGNQT 240
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 241 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQGR 300
Query: 303 EAFKQFLVENESVREELVIKLREK--LVVDHKEPQTAVTDEDSTEETVSTISPDSTDEEA 360
E K FL +N + E+ + LR+ L+ D + PD+ D EA
Sbjct: 301 ENAKLFLRDNPDLAREIELSLRQNAGLIADR---------------FLQNGGPDADDGEA 345
Query: 361 AA 362
AA
Sbjct: 346 AA 347
>gi|394989244|ref|ZP_10382078.1| recombinase A [Sulfuricella denitrificans skB26]
gi|393791663|dbj|GAB71717.1| recombinase A [Sulfuricella denitrificans skB26]
Length = 343
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 189/322 (58%), Positives = 243/322 (75%), Gaps = 3/322 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K+ AL AL QI FGKGSIM LG + + VVSTGS LDIALG GGLP+GRVVEI
Sbjct: 5 KNKALAAALSQIEKQFGKGSIMRLGDGEVVKDIQVVSTGSLGLDIALGVGGLPRGRVVEI 64
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIAE Q+ GG FIDAEHALDP A+ +GV +LL++QPD GEQ
Sbjct: 65 YGPESSGKTTLTLQVIAEMQKLGGTAAFIDAEHALDPQYAQKLGVNVSDLLISQPDTGEQ 124
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RSGSVD+VV+DSVAAL PK E++GEMGD+HM +QARLMSQALRKL+ ++
Sbjct: 125 ALEIADMLVRSGSVDIVVIDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKLTGNIKR 184
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
+ T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+R G +KKG+E IGS+
Sbjct: 185 TNTLVIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRTGAIKKGDEVIGSET 242
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK A+F++ +G+GISRE EII+L + HK K+GA ++Y +GK
Sbjct: 243 RVKVVKNKVAPPFKQAEFDILYGEGISREGEIIELGVVHKLVEKSGAWYSYKGEKIGQGK 302
Query: 303 EAFKQFLVENESVREELVIKLR 324
+ +++L E++ + E+ K+R
Sbjct: 303 DNSREYLKEHKDIAAEIEAKVR 324
>gi|110633616|ref|YP_673824.1| recombinase A [Chelativorans sp. BNC1]
gi|123058023|sp|Q11IW6.1|RECA_MESSB RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|110284600|gb|ABG62659.1| RecA protein [Chelativorans sp. BNC1]
Length = 360
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 191/324 (58%), Positives = 244/324 (75%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI +FGKGSIM LG + + +STGS LDIALG GGLP+GR++EI
Sbjct: 16 KSKALDAALSQIERAFGKGSIMRLGANDKVVEIETISTGSLGLDIALGVGGLPRGRIIEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH +AEAQ++GG C FIDAEHALDP A +GV ENLL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALHTVAEAQKKGGICGFIDAEHALDPVYARKLGVDLENLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+VVDSVAAL P+ E++GEMG++ MQARLMSQALRKL+ S+S
Sbjct: 136 ALEICDTLVRSGAVDVIVVDSVAALTPRAEIEGEMGESLPGMQARLMSQALRKLTASISR 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK EET+G+Q
Sbjct: 196 SNTMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSVKDREETVGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E++DL +K KAGA F+YN + +G+
Sbjct: 254 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGVVEKAGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E K FL +N V E+ + LR+
Sbjct: 314 ENAKLFLRDNPEVAREIELALRQN 337
>gi|421588720|ref|ZP_16033969.1| recombinase A [Rhizobium sp. Pop5]
gi|403706515|gb|EJZ21764.1| recombinase A [Rhizobium sp. Pop5]
Length = 362
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 192/331 (58%), Positives = 248/331 (74%), Gaps = 5/331 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI SFGKGSIM LG + + VSTGS +LDIALG GGLPKGR++EI
Sbjct: 16 KSKALEAALSQIERSFGKGSIMKLGSNENVIEIETVSTGSLSLDIALGIGGLPKGRIIEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL IAEAQ++GG C F+DAEHALDP A +GV +NLL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 136 ALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+ EE IG+Q
Sbjct: 196 SNTMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSVKEREEVIGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 254 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK--LVVDH 331
E K FL +N + E+ + LR+ L+ D
Sbjct: 314 ENAKTFLRDNPDLAREIELSLRQNAGLIADR 344
>gi|452963778|gb|EME68836.1| recombinase A [Magnetospirillum sp. SO-1]
Length = 359
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 187/321 (58%), Positives = 245/321 (76%), Gaps = 3/321 (0%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL+ A+ QI +FGKGSIM +G+ V+STGS LD+ALG GGLP+GR++EIYGP
Sbjct: 19 ALEAAVSQIERAFGKGSIMKMGQKDQVVETEVISTGSLGLDVALGIGGLPRGRIIEIYGP 78
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTTLALHVIAEAQ++GG C F+DAEHALDP A +GV + LL++QPD GEQAL
Sbjct: 79 ESSGKTTLALHVIAEAQKKGGTCAFVDAEHALDPIYARKLGVNLDELLISQPDAGEQALE 138
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ DTL+RSG++DV+VVDSVAALVP+ EL+GEMGD HM + ARLMSQALRKL+ S+S S+T
Sbjct: 139 IADTLVRSGAIDVLVVDSVAALVPRAELEGEMGDNHMGLHARLMSQALRKLTGSVSKSKT 198
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
I+IFINQ+R K+ FG P E T GGNALKFYASVRL I+R+G +K +E +G+Q VK
Sbjct: 199 IVIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLEIRRVGAIKDRDEVVGNQTRVK 256
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYND-RNFRGKEAF 305
+VKNKLAPPFK F++ +G+G+S+ E+IDL +K K+GA F+YN R +G+E
Sbjct: 257 VVKNKLAPPFKVVDFDIMYGEGVSKMGELIDLGVKASVVEKSGAWFSYNSTRIGQGRENA 316
Query: 306 KQFLVENESVREELVIKLREK 326
KQFL +N+++ E+ +R+
Sbjct: 317 KQFLRDNQAMAAEIEGTIRQN 337
>gi|52842028|ref|YP_095827.1| recombinase A [Legionella pneumophila subsp. pneumophila str.
Philadelphia 1]
gi|54297714|ref|YP_124083.1| recombinase A [Legionella pneumophila str. Paris]
gi|148359347|ref|YP_001250554.1| DNA recombination protein RecA [Legionella pneumophila str. Corby]
gi|296107394|ref|YP_003619094.1| recombination protein RecA [Legionella pneumophila 2300/99 Alcoy]
gi|378777663|ref|YP_005186101.1| recombinase A [Legionella pneumophila subsp. pneumophila ATCC
43290]
gi|397664255|ref|YP_006505793.1| DNA strand exchange and recombination protein [Legionella
pneumophila subsp. pneumophila]
gi|397667528|ref|YP_006509065.1| DNA strand exchange and recombination protein [Legionella
pneumophila subsp. pneumophila]
gi|59798138|sp|Q5X4B5.1|RECA_LEGPA RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|59798152|sp|Q5ZUJ7.1|RECA_LEGPH RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|166220654|sp|A5ICV8.1|RECA_LEGPC RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|13186174|emb|CAC33484.1| RecA protein [Legionella pneumophila]
gi|52629139|gb|AAU27880.1| RecA bacterial DNA recombination protein [Legionella pneumophila
subsp. pneumophila str. Philadelphia 1]
gi|53751499|emb|CAH12917.1| RecA protein [Legionella pneumophila str. Paris]
gi|148281120|gb|ABQ55208.1| RecA bacterial DNA recombination protein [Legionella pneumophila
str. Corby]
gi|165968102|gb|ABY75873.1| RecA protein [Legionella pneumophila 2300/99 Alcoy]
gi|295649295|gb|ADG25142.1| recombination protein RecA [Legionella pneumophila 2300/99 Alcoy]
gi|307610503|emb|CBX00085.1| RecA protein [Legionella pneumophila 130b]
gi|364508478|gb|AEW52002.1| RecA bacterial DNA recombination protein [Legionella pneumophila
subsp. pneumophila ATCC 43290]
gi|395127666|emb|CCD05865.1| DNA strand exchange and recombination protein with protease and
nuclease activity [Legionella pneumophila subsp.
pneumophila]
gi|395130939|emb|CCD09188.1| DNA strand exchange and recombination protein with protease and
nuclease activity [Legionella pneumophila subsp.
pneumophila]
Length = 348
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 189/326 (57%), Positives = 243/326 (74%), Gaps = 3/326 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGS+M +G S R + +STGS LDIALG GGLPKGR+VEI
Sbjct: 5 KQKALSAALSQIERQFGKGSVMRMGDSTVSRDIEAISTGSLGLDIALGIGGLPKGRIVEI 64
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIAE Q+ GG FIDAEHALDPS A+ +GVK + LL++QPD GEQ
Sbjct: 65 YGPESSGKTTLTLQVIAECQKMGGTAAFIDAEHALDPSYAQKLGVKVDELLVSQPDTGEQ 124
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RS +VDVV++DSVAAL PK E++GEMGD+H+ +QARLMSQALRKL+ ++
Sbjct: 125 ALEITDMLVRSAAVDVVIIDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKR 184
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +KKGEE +GS+
Sbjct: 185 SNTLVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKKGEEILGSET 242
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ + +GISRESEII+L ++ K+GA ++Y +GK
Sbjct: 243 RVKVVKNKVAPPFKMTEFDILYNEGISRESEIINLGVQLNLIEKSGAWYSYKQEKIGQGK 302
Query: 303 EAFKQFLVENESVREELVIKLREKLV 328
E + +L EN V EL ++R +L+
Sbjct: 303 ENVRLYLKENPQVAAELEQQIRTELL 328
>gi|407777783|ref|ZP_11125051.1| recombinase A [Nitratireductor pacificus pht-3B]
gi|407300583|gb|EKF19707.1| recombinase A [Nitratireductor pacificus pht-3B]
Length = 360
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 189/324 (58%), Positives = 245/324 (75%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI +FGKGSIM LG + + +STGS LDIALG GGLP+GR++EI
Sbjct: 16 KTKALDAALSQIERAFGKGSIMRLGANDQVVEIETISTGSLGLDIALGVGGLPRGRIIEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ALH +AEAQ++GG C FIDAEHALDP A +GV ENLL++QPD GEQ
Sbjct: 76 YGPESSGKTTMALHTVAEAQKKGGICGFIDAEHALDPVYARKLGVDLENLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+VVDSVAAL P+ E++GEMGD+ MQARLMSQALRKL+ S+S
Sbjct: 136 ALEICDTLVRSGALDVIVVDSVAALTPRAEIEGEMGDSLPGMQARLMSQALRKLTASISR 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK EET+G+Q
Sbjct: 196 SKTMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSVKDREETVGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
+K+VKNK+APPFK +F++ +G+G+S+ E+IDL +K K+GA F+YN + +G+
Sbjct: 254 RIKVVKNKMAPPFKQVEFDIMYGEGVSKTGELIDLGVKAGVVEKSGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E KQFL +N E+ + LR+
Sbjct: 314 ENAKQFLRDNPETAGEIELTLRQN 337
>gi|424881821|ref|ZP_18305453.1| protein RecA [Rhizobium leguminosarum bv. trifolii WU95]
gi|392518184|gb|EIW42916.1| protein RecA [Rhizobium leguminosarum bv. trifolii WU95]
Length = 364
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/350 (56%), Positives = 255/350 (72%), Gaps = 9/350 (2%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI SFGKGSIM LG + + +STGS LDIALG GGLP+GR+VEI
Sbjct: 16 KSKALEAALSQIERSFGKGSIMKLGSNENVVEIETISTGSLGLDIALGVGGLPRGRIVEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL IAEAQ++GG C F+DAEHALDP A +GV +NLL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 136 ALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+ EE IG+Q
Sbjct: 196 SNTMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAVKEREEVIGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 254 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK--LVVD----HKEPQTAVTDEDSTEE 346
E K FL +N + E+ + LR+ L+ D + P+ D D+T E
Sbjct: 314 ENAKTFLRDNPDLAREIELSLRQNAGLIADRFLQNGGPEPDDGDGDATAE 363
>gi|406979549|gb|EKE01311.1| hypothetical protein ACD_21C00162G0004 [uncultured bacterium]
Length = 338
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 190/323 (58%), Positives = 245/323 (75%), Gaps = 3/323 (0%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL AL QI FGKGS+M LG + + + VVSTGS LDIALGTGGLP+GRVVEIYGP
Sbjct: 8 ALAAALSQIDKQFGKGSVMLLGEHESTKDIQVVSTGSLGLDIALGTGGLPRGRVVEIYGP 67
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTTL LHVIAE Q+ GG FIDAEHALDPS AE +GV +LL++QPD GEQAL
Sbjct: 68 ESSGKTTLTLHVIAECQKLGGTAAFIDAEHALDPSYAEKLGVNINDLLISQPDNGEQALE 127
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ D L+RS +VD+VV+DSVAAL PK E++GEMGD HM +QARLMSQALRKL+ ++ S T
Sbjct: 128 IADMLVRSNAVDMVVIDSVAALTPKAEIEGEMGDQHMGLQARLMSQALRKLTANIKRSNT 187
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +KKG+E IG++ VK
Sbjct: 188 LVIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGSIKKGDEVIGNETRVK 245
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGKEAF 305
+VKNK+APPFK A+FE+ + +GISRE E+I+L + H F K+G+ + Y ++ +GKE
Sbjct: 246 VVKNKVAPPFKNAEFEIIYDQGISREGEVIELGVLHGFVEKSGSWYDYQGKHIGQGKENA 305
Query: 306 KQFLVENESVREELVIKLREKLV 328
++FL ++ + E+ +R KL+
Sbjct: 306 REFLRGHKDIMAEIEGLIRAKLL 328
>gi|54294688|ref|YP_127103.1| recombinase A [Legionella pneumophila str. Lens]
gi|59798134|sp|Q5WVQ0.1|RECA_LEGPL RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|53754520|emb|CAH16004.1| RecA protein [Legionella pneumophila str. Lens]
Length = 348
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 189/326 (57%), Positives = 243/326 (74%), Gaps = 3/326 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGS+M +G S R + +STGS LDIALG GGLPKGR+VEI
Sbjct: 5 KQKALSAALSQIERQFGKGSVMRMGDSTVSRDIEAISTGSLGLDIALGIGGLPKGRIVEI 64
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIAE Q+ GG FIDAEHALDPS A+ +GVK + LL++QPD GEQ
Sbjct: 65 YGPESSGKTTLTLQVIAECQKMGGTAAFIDAEHALDPSYAQKLGVKVDELLVSQPDTGEQ 124
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RS +VDVV++DSVAAL PK E++GEMGD+H+ +QARLMSQALRKL+ ++
Sbjct: 125 ALEITDMLVRSAAVDVVIIDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKR 184
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +KKGEE +GS+
Sbjct: 185 SNTLVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKKGEEILGSET 242
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ + +GISRESEII+L ++ K+GA ++Y +GK
Sbjct: 243 RVKVVKNKVAPPFKMTEFDILYNEGISRESEIINLGVQLNLIEKSGAWYSYKQEKIGQGK 302
Query: 303 EAFKQFLVENESVREELVIKLREKLV 328
E + +L EN V EL ++R +L+
Sbjct: 303 ENVRLYLKENPQVAAELEQQIRTELL 328
>gi|330813880|ref|YP_004358119.1| recombinase A [Candidatus Pelagibacter sp. IMCC9063]
gi|327486975|gb|AEA81380.1| RecA protein [Candidatus Pelagibacter sp. IMCC9063]
Length = 376
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 195/352 (55%), Positives = 257/352 (73%), Gaps = 12/352 (3%)
Query: 7 ALQQALDQITSSFGKGSIMWLG-RSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYG 65
+L A+ QI S+FGKGS+M LG R V + +STGS +LDIALG GGLPK R+VEIYG
Sbjct: 24 SLDAAISQIDSNFGKGSVMKLGQRQVM--DIESISTGSLSLDIALGIGGLPKSRIVEIYG 81
Query: 66 PEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQAL 125
PE+SGKTTLAL VIAEAQ+ GG C FIDAEHALDPS A+ +GV T +LL++QPD GEQAL
Sbjct: 82 PESSGKTTLALQVIAEAQKSGGTCAFIDAEHALDPSYAKKLGVNTTDLLISQPDTGEQAL 141
Query: 126 SLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQ 185
+ DTL+RSG++ V+VVDSVAAL P+ EL+GEMGD HM +QARLMSQALRKL+ S+S S
Sbjct: 142 EITDTLVRSGAISVLVVDSVAALTPRAELEGEMGDHHMGLQARLMSQALRKLTGSISKSN 201
Query: 186 TILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAV 245
T++IFINQ+R K+ FG P E T GGNALKFY+SVRL+I+RIG +K G+E +G+Q V
Sbjct: 202 TMVIFINQIRMKIGVM-FGSP-ETTAGGNALKFYSSVRLDIRRIGAIKDGDEIVGNQTRV 259
Query: 246 KIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGKEA 304
K+VKNK+APPFK +F++ +GKGIS+ E+IDL K KAGA ++Y +GKE
Sbjct: 260 KVVKNKVAPPFKVVEFDIMYGKGISKLGELIDLGAKADIVEKAGAWYSYKGEKIGQGKEN 319
Query: 305 FKQFLVENESVREELVIKLREK--LVVD----HKEPQTAVTDEDSTEETVST 350
K++L+ N + E+ + +R L+ D + P+ + E++++ T T
Sbjct: 320 SKEYLINNPKISAEIEMAIRANAGLISDKMMGNPSPKEKIETEENSKNTKDT 371
>gi|83594151|ref|YP_427903.1| recombinase A [Rhodospirillum rubrum ATCC 11170]
gi|386350903|ref|YP_006049151.1| recombinase A [Rhodospirillum rubrum F11]
gi|123766962|sp|Q2RQH9.1|RECA_RHORT RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|83577065|gb|ABC23616.1| RecA protein [Rhodospirillum rubrum ATCC 11170]
gi|346719339|gb|AEO49354.1| recombinase A [Rhodospirillum rubrum F11]
Length = 366
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 187/317 (58%), Positives = 247/317 (77%), Gaps = 3/317 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ A+ QI +FGKGSIM LG+ + + +STGS LDIALG GGLP+GR+VEI
Sbjct: 16 KQKALEAAVGQIERAFGKGSIMKLGQRGSVVDIESISTGSLGLDIALGIGGLPRGRIVEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALHV+AEAQ++GG C F+DAEHA DP A +GV ++LL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALHVVAEAQKKGGQCAFVDAEHAFDPLYARKLGVSLDDLLVSQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+V+DSVAALVPK EL+G+MGD+H+ +QARLMSQALRKL+ ++S
Sbjct: 136 ALEIADTLVRSGAIDVLVIDSVAALVPKAELEGDMGDSHVGLQARLMSQALRKLTGTVSR 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK EE +G+Q
Sbjct: 196 SNTLIIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKDKEEVVGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYND-RNFRGK 302
VK+VKNK+APPFK +F++ +G+GIS+ E++DL +K K+GA F+YN R +G+
Sbjct: 254 RVKVVKNKVAPPFKVVEFDIMYGEGISKLGEMLDLGVKANIIEKSGAWFSYNSTRIGQGR 313
Query: 303 EAFKQFLVENESVREEL 319
E KQFL +N ++ EE+
Sbjct: 314 ENAKQFLRDNPAMAEEI 330
>gi|116252383|ref|YP_768221.1| recombinase A [Rhizobium leguminosarum bv. viciae 3841]
gi|424870873|ref|ZP_18294535.1| protein RecA [Rhizobium leguminosarum bv. viciae WSM1455]
gi|122988509|sp|Q1MFZ8.1|RECA_RHIL3 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|115257031|emb|CAK08125.1| putative recombinase [Rhizobium leguminosarum bv. viciae 3841]
gi|393166574|gb|EJC66621.1| protein RecA [Rhizobium leguminosarum bv. viciae WSM1455]
Length = 364
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 190/331 (57%), Positives = 247/331 (74%), Gaps = 5/331 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI SFGKGSIM LG + + +STGS LDIALG GGLP+GR++EI
Sbjct: 16 KSKALEAALSQIERSFGKGSIMKLGSNENVVEIETISTGSLGLDIALGVGGLPRGRIIEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL IAEAQ++GG C F+DAEHALDP A +GV +NLL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 136 ALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+ EE IG+Q
Sbjct: 196 SNTMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAVKEREEVIGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 254 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK--LVVDH 331
E K FL +N + E+ + LR+ L+ D
Sbjct: 314 ENAKTFLRDNPDLAREIELSLRQNAGLIADR 344
>gi|410584495|ref|ZP_11321598.1| protein RecA [Thermaerobacter subterraneus DSM 13965]
gi|410504430|gb|EKP93941.1| protein RecA [Thermaerobacter subterraneus DSM 13965]
Length = 340
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 190/342 (55%), Positives = 258/342 (75%), Gaps = 3/342 (0%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
M +++ AL+ AL+QI FGKGSIM +G + +V V+ TGS ALDIALG GG+P+GR+
Sbjct: 1 MIERERALEMALNQIEKQFGKGSIMRMGEASARLNVEVIPTGSLALDIALGVGGMPRGRI 60
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+EI+GPEASGKTT+ALHV+A AQR GG FIDAEHALDP AE +GV NLL++QPD
Sbjct: 61 IEIFGPEASGKTTVALHVVASAQRSGGVAAFIDAEHALDPVYAENLGVDINNLLISQPDT 120
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + + L+RSG+VDV+V+DSVAALVP+ E++GEMGDAH+ +QARLMSQALRKL+ +
Sbjct: 121 GEQALEIAEALVRSGAVDVIVIDSVAALVPRAEIEGEMGDAHVGLQARLMSQALRKLTGA 180
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
++ S+T LIFINQ+R K+ FG P EVT GG ALKFYASVRL+++R+ +K+G E IG
Sbjct: 181 IAKSRTCLIFINQIREKVGVM-FGNP-EVTPGGRALKFYASVRLDVRRVETLKQGGEMIG 238
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYND-RNF 299
+ K+VKNK+APPF+ A+F+L +GKGISRE +++D+A +H KAGA ++Y D R
Sbjct: 239 IRARAKVVKNKVAPPFRQAEFDLLYGKGISREGDLLDIATQHGIIEKAGAWYSYGDTRIG 298
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDE 341
+G+E +++LV++ V + + +LRE L + TA DE
Sbjct: 299 QGRENAREYLVQHPEVADAIERRLRELLSLGGIRAATANEDE 340
>gi|433445661|ref|ZP_20409967.1| recombinase A [Anoxybacillus flavithermus TNO-09.006]
gi|432000937|gb|ELK21825.1| recombinase A [Anoxybacillus flavithermus TNO-09.006]
Length = 345
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 189/343 (55%), Positives = 252/343 (73%), Gaps = 4/343 (1%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
M+ + AL+QAL QI FGKGSIM LG T R + VS+GS ALDIALG GG P+GR+
Sbjct: 1 MNDRQAALEQALKQIEKQFGKGSIMKLGEQ-TDRQISTVSSGSLALDIALGVGGYPRGRI 59
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+EIYGPE+SGKTT+ALH IAE Q+QGG FIDAEHALDP AE +GV + LLL+QPD
Sbjct: 60 IEIYGPESSGKTTVALHAIAEVQKQGGQAAFIDAEHALDPVYAEKLGVNIDELLLSQPDT 119
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + + L+RSG+VD++V+DSVAALVPK E++GEMGDAH+ +QARLMSQALRKLS +
Sbjct: 120 GEQALEIAEALVRSGAVDIIVIDSVAALVPKAEIEGEMGDAHVGLQARLMSQALRKLSGA 179
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
++ S+TI IFINQ+R K+ FG P E T GG ALKFYASVRL ++R +K+G + +G
Sbjct: 180 INKSKTIAIFINQIREKVGVM-FGNP-ETTPGGRALKFYASVRLEVRRAEQIKQGNDMVG 237
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF- 299
++ +K+VKNK+APPFKTA ++ +G+GIS+E EIID+ + K+GA ++Y D
Sbjct: 238 NKTKIKVVKNKVAPPFKTADVDIMYGEGISKEGEIIDMGAELDIIQKSGAWYSYKDERLG 297
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDED 342
+G+E KQFL EN + EE+ ++R+ + T+V ++D
Sbjct: 298 QGRENAKQFLKENPHIMEEIAREIRQHYGITAGASTTSVREDD 340
>gi|440226825|ref|YP_007333916.1| recombination protein RecA [Rhizobium tropici CIAT 899]
gi|440038336|gb|AGB71370.1| recombination protein RecA [Rhizobium tropici CIAT 899]
Length = 361
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 191/331 (57%), Positives = 248/331 (74%), Gaps = 5/331 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI SFGKGSIM LG + + VSTGS +LDIALG GGLPKGR++EI
Sbjct: 16 KSKALEAALSQIERSFGKGSIMKLGSNENVVEIETVSTGSLSLDIALGIGGLPKGRIIEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL IAEAQ++GG C F+DAEHALDP A +GV +NLL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 136 ALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+ EE IG+Q
Sbjct: 196 SNTMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAVKEREEVIGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 254 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK--LVVDH 331
E K FL +N + E+ + LR+ L+ D
Sbjct: 314 ENAKIFLRDNPDLSREIELSLRQNAGLIADR 344
>gi|347446578|dbj|BAK82130.1| recombination protein RecA [Calyptogena phaseoliformis symbiont]
Length = 344
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 188/341 (55%), Positives = 256/341 (75%), Gaps = 3/341 (0%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
+K AL+ L QI FGKGS+M+LG + V TGS +LDIALG GGLP+GRV+E
Sbjct: 4 QKKQALKATLAQIDKQFGKGSVMFLGDDQAQSDIEAVFTGSLSLDIALGIGGLPRGRVIE 63
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL LHVIAE Q+ GG FIDAEHALDP A+ +GV T++LL++QPD GE
Sbjct: 64 IYGPESSGKTTLTLHVIAEVQKLGGTAAFIDAEHALDPRYAKRLGVNTDDLLISQPDTGE 123
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L+RSGSVD+VV+DSVAAL PK E++GEMG +HM +QARLMSQALRKL+ ++
Sbjct: 124 QALEITDMLVRSGSVDIVVIDSVAALTPKAEIEGEMGASHMGLQARLMSQALRKLTSNIK 183
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +KKG+E +G++
Sbjct: 184 RTNTMVIFINQLRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGTIKKGDEILGNE 241
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRG 301
VK++KNK+APPFK A+F++ + +GIS ESEIIDL +KH F KAGA ++ +R +G
Sbjct: 242 TRVKVLKNKVAPPFKQAEFQILYNEGISLESEIIDLGVKHGFVEKAGAWYSVEGERIGQG 301
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDED 342
K+ +++L N + +++ ++REKL+ + + V+++D
Sbjct: 302 KDNAREYLKLNPKLSQKIETQIREKLLTKEADIEKDVSNQD 342
>gi|114707287|ref|ZP_01440184.1| recombinase A [Fulvimarina pelagi HTCC2506]
gi|114537168|gb|EAU40295.1| recombinase A [Fulvimarina pelagi HTCC2506]
Length = 357
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 191/324 (58%), Positives = 243/324 (75%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI +FGKGSIM LG++ V VSTGS LDIALG GGLPKGRV+EI
Sbjct: 16 KTKALDAALSQIERAFGKGSIMKLGQNNQSVEVETVSTGSLGLDIALGIGGLPKGRVIEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH IAEAQ++GG C F+DAEHALDP A +GV ENLL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPIYARKLGVDLENLLVSQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+VVDSVAAL P+ E++GEMGD+ MQARLMSQALRKL+ S+S
Sbjct: 136 ALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGMQARLMSQALRKLTGSISR 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+ ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K +E G+Q
Sbjct: 196 SKCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKDRDEVTGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G+G+S+ E+IDL +K K+GA F+YN + +G+
Sbjct: 254 KVKVVKNKLAPPFKQVEFDIMYGEGVSKMGELIDLGVKSGIVEKSGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E KQFL +N +E+ +R+
Sbjct: 314 ENAKQFLRDNPDAAQEIEQSIRQN 337
>gi|241204889|ref|YP_002975985.1| recombinase A [Rhizobium leguminosarum bv. trifolii WSM1325]
gi|240858779|gb|ACS56446.1| recA protein [Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 364
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 191/331 (57%), Positives = 247/331 (74%), Gaps = 5/331 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI SFGKGSIM LG + + +STGS LDIALG GGLP+GR+VEI
Sbjct: 16 KSKALEAALSQIERSFGKGSIMKLGSNENVVEIETISTGSLGLDIALGVGGLPRGRIVEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL IAEAQ++GG C F+DAEHALDP A +GV +NLL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 136 ALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+ EE IG+Q
Sbjct: 196 SNTMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAVKEREEVIGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 254 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK--LVVDH 331
E K FL +N + E+ + LR+ L+ D
Sbjct: 314 ENAKTFLRDNPDLAREIELSLRQNAGLIADR 344
>gi|218463763|ref|ZP_03503854.1| recombinase A [Rhizobium etli Kim 5]
Length = 362
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 191/331 (57%), Positives = 247/331 (74%), Gaps = 5/331 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI SFGKGSIM LG + + +STGS LDIALG GGLPKGR++EI
Sbjct: 16 KSKALEAALSQIERSFGKGSIMKLGSNENVIEIETISTGSLGLDIALGVGGLPKGRIIEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL IAEAQ++GG C F+DAEHALDP A +GV +NLL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 136 ALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+ EE IG+Q
Sbjct: 196 SNTMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSVKEREEVIGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 254 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK--LVVDH 331
E K FL +N + E+ + LR+ L+ D
Sbjct: 314 ENAKTFLRDNPDLAREIELALRQNAGLIADR 344
>gi|424895240|ref|ZP_18318814.1| protein RecA [Rhizobium leguminosarum bv. trifolii WSM2297]
gi|393179467|gb|EJC79506.1| protein RecA [Rhizobium leguminosarum bv. trifolii WSM2297]
Length = 362
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 190/331 (57%), Positives = 247/331 (74%), Gaps = 5/331 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI SFGKGSIM LG + + +STGS LDIALG GGLP+GR++EI
Sbjct: 16 KSKALEAALSQIERSFGKGSIMKLGSNENVVEIETISTGSLGLDIALGVGGLPRGRIIEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL IAEAQ++GG C F+DAEHALDP A +GV +NLL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 136 ALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+ EE IG+Q
Sbjct: 196 SNTMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAVKEREEVIGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 254 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK--LVVDH 331
E K FL +N + E+ + LR+ L+ D
Sbjct: 314 ENAKTFLRDNPDLAREIELSLRQNAGLIADR 344
>gi|424887837|ref|ZP_18311440.1| protein RecA [Rhizobium leguminosarum bv. trifolii WSM2012]
gi|393173386|gb|EJC73430.1| protein RecA [Rhizobium leguminosarum bv. trifolii WSM2012]
Length = 362
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 190/331 (57%), Positives = 247/331 (74%), Gaps = 5/331 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI SFGKGSIM LG + + +STGS LDIALG GGLP+GR++EI
Sbjct: 16 KSKALEAALSQIERSFGKGSIMKLGSNENVVEIETISTGSLGLDIALGVGGLPRGRIIEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL IAEAQ++GG C F+DAEHALDP A +GV +NLL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 136 ALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+ EE IG+Q
Sbjct: 196 SNTMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAVKEREEVIGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 254 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK--LVVDH 331
E K FL +N + E+ + LR+ L+ D
Sbjct: 314 ENAKTFLRDNPDLAREIELSLRQNAGLIADR 344
>gi|420244107|ref|ZP_14747942.1| protein RecA [Rhizobium sp. CF080]
gi|398056095|gb|EJL48120.1| protein RecA [Rhizobium sp. CF080]
Length = 362
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/331 (58%), Positives = 247/331 (74%), Gaps = 5/331 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI SFGKGSIM LG + + VSTGS +LDIALG GGLPKGR+VEI
Sbjct: 16 KSKALEAALSQIERSFGKGSIMKLGSNENIVEIETVSTGSLSLDIALGIGGLPKGRIVEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL IAEAQ++GG C F+DAEHALDP A +GV +NLL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 136 ALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+ EE +G+Q
Sbjct: 196 SNTMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGQVKEREEVVGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E+IDL +K K+GA F+YN + +G+
Sbjct: 254 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELIDLGVKAGIVEKSGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK--LVVDH 331
E K FL +N + E+ LR+ L+ D
Sbjct: 314 ENAKIFLRDNPELAREIETSLRQNAGLIADR 344
>gi|444310432|ref|ZP_21146054.1| recombinase A [Ochrobactrum intermedium M86]
gi|443486240|gb|ELT49020.1| recombinase A [Ochrobactrum intermedium M86]
Length = 361
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 189/324 (58%), Positives = 244/324 (75%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI +FGKGSIM LG++ + VSTGS +LDIALG GGLPKGR+VEI
Sbjct: 16 KTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIVEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH IAEAQ++GG C F+DAEHALDP A +GV ENLL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 136 ALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISR 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+ +E +G+Q
Sbjct: 196 SNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKERDEVVGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 254 RVKVVKNKLAPPFKQVEFDIMYGAGVSKTGELVDLGVKAGVVEKSGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E KQ+L +N V E+ LR+
Sbjct: 314 ENAKQYLKDNPEVAREIETTLRQN 337
>gi|464597|sp|Q05358.1|RECA_LEGPN RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|48780|emb|CAA39097.1| recA [Legionella pneumophila]
gi|227652|prf||1708209A recA gene
Length = 348
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 188/326 (57%), Positives = 243/326 (74%), Gaps = 3/326 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL A+ QI FGKGS+M +G S R + +STGS LDIALG GGLPKGR+VEI
Sbjct: 5 KQKALSAAVSQIERQFGKGSVMRMGDSTVSRDIEAISTGSLGLDIALGIGGLPKGRIVEI 64
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIAE Q+ GG FIDAEHALDPS A+ +GVK + LL++QPD GEQ
Sbjct: 65 YGPESSGKTTLTLQVIAECQKMGGTAAFIDAEHALDPSYAQKLGVKVDELLVSQPDTGEQ 124
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RS +VDVV++DSVAAL PK E++GEMGD+H+ +QARLMSQALRKL+ ++
Sbjct: 125 ALEITDMLVRSAAVDVVIIDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKR 184
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +KKGEE +GS+
Sbjct: 185 SNTLVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKKGEEILGSET 242
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ + +GISRESEII+L ++ K+GA ++Y +GK
Sbjct: 243 RVKVVKNKVAPPFKMTEFDILYNEGISRESEIINLGVQLNLIEKSGAWYSYKQEKIGQGK 302
Query: 303 EAFKQFLVENESVREELVIKLREKLV 328
E + +L EN V EL ++R +L+
Sbjct: 303 ENVRLYLKENPQVAAELEQQIRTELL 328
>gi|209549552|ref|YP_002281469.1| recombinase A [Rhizobium leguminosarum bv. trifolii WSM2304]
gi|402487937|ref|ZP_10834752.1| recombinase A [Rhizobium sp. CCGE 510]
gi|424913756|ref|ZP_18337120.1| protein RecA [Rhizobium leguminosarum bv. trifolii WSM597]
gi|226723636|sp|B5ZRG2.1|RECA_RHILW RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|209535308|gb|ACI55243.1| recA protein [Rhizobium leguminosarum bv. trifolii WSM2304]
gi|363399254|gb|AEW16333.1| recombination protein A [Rhizobium sp. CCGE 510]
gi|392849932|gb|EJB02453.1| protein RecA [Rhizobium leguminosarum bv. trifolii WSM597]
gi|401813105|gb|EJT05452.1| recombinase A [Rhizobium sp. CCGE 510]
Length = 362
Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust.
Identities = 190/331 (57%), Positives = 247/331 (74%), Gaps = 5/331 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI SFGKGSIM LG + + +STGS LDIALG GGLP+GR++EI
Sbjct: 16 KSKALEAALSQIERSFGKGSIMKLGSNENVVEIETISTGSLGLDIALGVGGLPRGRIIEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL IAEAQ++GG C F+DAEHALDP A +GV +NLL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 136 ALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+ EE IG+Q
Sbjct: 196 SNTMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAVKEREEVIGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 254 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK--LVVDH 331
E K FL +N + E+ + LR+ L+ D
Sbjct: 314 ENAKTFLRDNPDLAREIELSLRQNAGLIADR 344
>gi|254489873|ref|ZP_05103068.1| protein RecA [Methylophaga thiooxidans DMS010]
gi|224464958|gb|EEF81212.1| protein RecA [Methylophaga thiooxydans DMS010]
Length = 347
Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust.
Identities = 186/333 (55%), Positives = 246/333 (73%), Gaps = 3/333 (0%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKG++M +G + R + VSTGS LD+ALG GGLP+GRV+E
Sbjct: 4 NKKKALGAALGQIEKQFGKGAVMRMGDAGAARDIAAVSTGSIGLDVALGIGGLPRGRVIE 63
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL LH IAE Q+ GG F+DAEHALDP AE +GV ++LL++QPD GE
Sbjct: 64 IYGPESSGKTTLTLHAIAEMQKMGGTAAFVDAEHALDPVYAEKLGVDIDDLLVSQPDTGE 123
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L+RSG+VD+VVVDSVAAL PK E++G+MGD+HM +QARLMSQALRKL+ ++
Sbjct: 124 QALEITDMLVRSGAVDIVVVDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTANIK 183
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +KKG+E +G++
Sbjct: 184 RSNTLVIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAIKKGDEILGNE 241
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYND-RNFRG 301
VK+VKNK+APPFK +F++ +G+GISRE E+IDL + K+GA ++YN R +G
Sbjct: 242 TRVKVVKNKVAPPFKQVEFDILYGEGISREGELIDLGVSQNLVEKSGAWYSYNGTRIGQG 301
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEP 334
K+ + FL EN + E+ K+RE ++ +P
Sbjct: 302 KDNVRAFLRENTEMAAEIEAKIREAMLPKKVKP 334
>gi|90420927|ref|ZP_01228832.1| RecA [Aurantimonas manganoxydans SI85-9A1]
gi|90334902|gb|EAS48674.1| RecA [Aurantimonas manganoxydans SI85-9A1]
Length = 357
Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust.
Identities = 189/324 (58%), Positives = 244/324 (75%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K+ AL AL QI +FGKGSIM LG + + VSTGS LDIALG GGLPKGRVVE+
Sbjct: 16 KNKALDAALSQIERAFGKGSIMRLGENEKIVEIETVSTGSLGLDIALGIGGLPKGRVVEV 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH IAEAQ++GG C F+DAEHALDP A +GV ENLL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALHTIAEAQKKGGVCAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+VVDSVAAL P+ E++GEMGD+ MQARLMSQALRKL+ S+S
Sbjct: 136 ALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGMQARLMSQALRKLTGSISR 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+ ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K +E G+Q
Sbjct: 196 SKCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAIKDRDEVTGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G+G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 254 KVKVVKNKLAPPFKQVEFDIMYGEGVSKTGELVDLGVKSGIVEKSGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E K FL +N +V +E+ +R+
Sbjct: 314 ENAKSFLRDNPAVADEIETLIRQN 337
>gi|46200836|ref|ZP_00056375.2| COG0468: RecA/RadA recombinase [Magnetospirillum magnetotacticum
MS-1]
Length = 351
Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust.
Identities = 188/321 (58%), Positives = 244/321 (76%), Gaps = 3/321 (0%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL+ A+ QI +FGKGSIM LG VVSTGS LD+ALG GG+P+GR++E+YGP
Sbjct: 11 ALEAAVSQIERAFGKGSIMKLGGKDQVVETEVVSTGSLGLDVALGIGGVPRGRIIEVYGP 70
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTTLALH+IAEAQ++GG C F+DAEHALDPS A +GV + LL++QPD GEQAL
Sbjct: 71 ESSGKTTLALHIIAEAQKKGGTCAFVDAEHALDPSYARKLGVALDELLISQPDAGEQALE 130
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ DTL+RSG+VDV+VVDSVAALVP+ EL+GEMGD HM + ARLMSQALRKL+ S+S S+T
Sbjct: 131 IADTLVRSGAVDVLVVDSVAALVPRAELEGEMGDNHMGLHARLMSQALRKLTGSVSKSKT 190
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
I+IFINQ+R K+ FG P E T GGNALKFYASVR+ I+R+G +K +E +G+Q VK
Sbjct: 191 IVIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRMEIRRVGAIKDRDEVVGNQTRVK 248
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYND-RNFRGKEAF 305
+VKNKLAPPFK F++ +G+GIS+ E+IDL +K K+GA F+YN R +G+E
Sbjct: 249 VVKNKLAPPFKVVDFDIMYGEGISKMGELIDLGVKANVVEKSGAWFSYNSTRIGQGRENA 308
Query: 306 KQFLVENESVREELVIKLREK 326
KQFL +N ++ E+ +R+
Sbjct: 309 KQFLRDNPAMAAEIEGAIRQN 329
>gi|389805851|ref|ZP_10202998.1| recombinase A [Rhodanobacter thiooxydans LCS2]
gi|388447092|gb|EIM03106.1| recombinase A [Rhodanobacter thiooxydans LCS2]
Length = 345
Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/333 (58%), Positives = 247/333 (74%), Gaps = 4/333 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKG++M +G V V VSTGS LDIALG GGLP+GRVVE
Sbjct: 4 NKRKALTSALGQIEKQFGKGAVMRMGDRVN-EPVETVSTGSLGLDIALGVGGLPRGRVVE 62
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTT+ L IA QR GG FIDAEHALDPS AE +GVK ++LL++QPD GE
Sbjct: 63 IYGPESSGKTTMTLQAIANCQRAGGTAAFIDAEHALDPSYAEKLGVKVDDLLVSQPDTGE 122
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L+RSG+VD+VVVDSVAAL PK E++GEMGD+H+ + ARLMSQALRKL+ ++
Sbjct: 123 QALEIADMLVRSGAVDMVVVDSVAALTPKAEIEGEMGDSHVGLHARLMSQALRKLTANIK 182
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VKKG+E IGS+
Sbjct: 183 KSGCLVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAVKKGDEIIGSE 240
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+APPF+ +FE+ +G+G SRE EII+L + K+GA ++YN DR +G
Sbjct: 241 TRVKVVKNKVAPPFRQCEFEILYGEGTSREGEIIELGVAQNLIDKSGAWYSYNGDRIGQG 300
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEP 334
KE +QFL +N ++ E+ +LRE+L+V +P
Sbjct: 301 KENVRQFLRDNPAIANEIDKQLRERLLVPVGKP 333
>gi|222148885|ref|YP_002549842.1| recombinase A [Agrobacterium vitis S4]
gi|254790418|sp|B9JX56.1|RECA_AGRVS RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|221735871|gb|ACM36834.1| RecA protein [Agrobacterium vitis S4]
Length = 362
Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust.
Identities = 190/324 (58%), Positives = 244/324 (75%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI SFGKGSIM LG + V VSTGS +LDIALG GGLPKGR++EI
Sbjct: 16 KSKALEAALSQIERSFGKGSIMKLGANEKIVEVETVSTGSLSLDIALGIGGLPKGRIIEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL IAEAQ++GG C F+DAEHALDP A +GV +NLL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALQTIAEAQKKGGVCAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+V+DSVAAL PK E++GEMGD+ MQARLMSQALRKL+ S+S
Sbjct: 136 ALEITDTLVRSGAIDVLVIDSVAALTPKAEIEGEMGDSLPGMQARLMSQALRKLTGSISR 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S +++FINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK EE +G+Q
Sbjct: 196 SNCMVVFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAVKDREEIVGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E++DL +K KAGA F+YN + +G+
Sbjct: 254 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKAGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E K FL +N +V +E+ LR+
Sbjct: 314 ENAKIFLRDNPAVADEIETALRQN 337
>gi|404319018|ref|ZP_10966951.1| recombinase A [Ochrobactrum anthropi CTS-325]
Length = 361
Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust.
Identities = 188/324 (58%), Positives = 243/324 (75%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI +FGKGSIM LG++ + V TGS +LDIALG GGLPKGR+VEI
Sbjct: 16 KTKALDAALSQIERAFGKGSIMRLGKNAPVIEIETVPTGSLSLDIALGVGGLPKGRIVEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH IAEAQ++GG C F+DAEHALDP A +GV ENLL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 136 ALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISR 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+ +E +G+Q
Sbjct: 196 SNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKERDEVVGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 254 RVKVVKNKLAPPFKQVEFDIMYGAGVSKTGELVDLGVKAGVVEKSGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E KQ+L +N V E+ LR+
Sbjct: 314 ENAKQYLKDNPEVAREIETTLRQN 337
>gi|90818650|emb|CAJ32630.1| recombinase A [Ochrobactrum anthropi]
gi|90818652|emb|CAJ32631.1| recombinase A [Ochrobactrum anthropi]
gi|90818666|emb|CAJ32638.1| recombinase A [Ochrobactrum intermedium]
Length = 355
Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust.
Identities = 189/324 (58%), Positives = 244/324 (75%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI +FGKGSIM LG++ + VSTGS +LDIALG GGLPKGR+VEI
Sbjct: 16 KTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIVEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH IAEAQ++GG C F+DAEHALDP A +GV ENLL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 136 ALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISR 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+ +E +G+Q
Sbjct: 196 SNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKERDEVVGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 254 RVKVVKNKLAPPFKQVEFDIMYGAGVSKTGELVDLGVKAGVVEKSGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E KQ+L +N V E+ LR+
Sbjct: 314 ENAKQYLKDNPEVAREIETTLRQN 337
>gi|407976207|ref|ZP_11157108.1| recombinase A [Nitratireductor indicus C115]
gi|407428382|gb|EKF41065.1| recombinase A [Nitratireductor indicus C115]
Length = 361
Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust.
Identities = 188/324 (58%), Positives = 245/324 (75%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI +FGKGSIM LG + + +STGS LDIALG GGLP+GR++EI
Sbjct: 16 KTKALDAALSQIERAFGKGSIMRLGANDQVVEIETISTGSLGLDIALGIGGLPRGRIIEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH +AEAQ++GG C FIDAEHALDP A +GV ENLL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALHTVAEAQKKGGICGFIDAEHALDPVYARKLGVDLENLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+VVDSVAAL P+ E++GEMGD+ MQARLMSQALRKL+ S+S
Sbjct: 136 ALEICDTLVRSGALDVIVVDSVAALTPRAEIEGEMGDSLPGMQARLMSQALRKLTASISR 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+T++IFINQ+R K+ FG P E T GGNALKFY+SVRL+I+RIG VK +ET+G+Q
Sbjct: 196 SKTMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYSSVRLDIRRIGSVKDRDETVGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
+K+VKNK+APPFK +F++ +G+G+S+ E+IDL +K K+GA F+YN + +G+
Sbjct: 254 RIKVVKNKMAPPFKQVEFDIMYGEGVSKTGELIDLGVKAGVVEKSGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E KQFL +N + E+ LR+
Sbjct: 314 ENAKQFLRDNPEILNEIETALRQN 337
>gi|90818644|emb|CAJ32627.1| recombinase A [Ochrobactrum anthropi]
gi|90818646|emb|CAJ32628.1| recombinase A [Ochrobactrum anthropi]
Length = 355
Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust.
Identities = 189/324 (58%), Positives = 244/324 (75%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI +FGKGSIM LG++ + VSTGS +LDIALG GGLPKGR+VEI
Sbjct: 16 KTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIVEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH IAEAQ++GG C F+DAEHALDP A +GV ENLL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 136 ALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISR 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+ +E +G+Q
Sbjct: 196 SNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKERDEVVGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 254 RVKVVKNKLAPPFKQVEFDIMYGAGVSKTGELVDLGVKAGVVEKSGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E KQ+L +N V E+ LR+
Sbjct: 314 ENAKQYLKDNPEVAREIETTLRQN 337
>gi|254502491|ref|ZP_05114642.1| protein RecA [Labrenzia alexandrii DFL-11]
gi|222438562|gb|EEE45241.1| protein RecA [Labrenzia alexandrii DFL-11]
Length = 355
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 190/324 (58%), Positives = 245/324 (75%), Gaps = 4/324 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI +FGKGSIM +G+ V VSTGS LDIALG GGLPKGR+VEI
Sbjct: 16 KTKALDAALSQIERAFGKGSIMRMGQGQVV-EVQSVSTGSLGLDIALGIGGLPKGRIVEI 74
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH +AEAQ+ GG C FIDAEHALDP A +GV +NLL++QPD GEQ
Sbjct: 75 YGPESSGKTTLALHTVAEAQKTGGICAFIDAEHALDPIYARKLGVDIDNLLISQPDAGEQ 134
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+V+DSVAAL PK EL+GEMGD+ MQARLMSQALRKL+ S+S
Sbjct: 135 ALEIADTLVRSGAIDVLVIDSVAALTPKAELEGEMGDSLPGMQARLMSQALRKLTASISK 194
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+ ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K +E +G+Q
Sbjct: 195 SKCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAIKDKDEVVGNQT 252
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPF+ +F++ +G+G+S+ E+IDL +K K+GA F+YN + +G+
Sbjct: 253 RVKVVKNKLAPPFRQVEFDIIYGEGVSKMGELIDLGVKGGIVEKSGAWFSYNSQRLGQGR 312
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E KQFL EN+ + +E+ + +R+
Sbjct: 313 ENSKQFLRENKEIADEIELSIRQN 336
>gi|283481769|emb|CBA10139.1| recombinase A [Agrobacterium larrymoorei]
Length = 323
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 190/321 (59%), Positives = 245/321 (76%), Gaps = 3/321 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI SFGKGSIM LG + V VSTGS +LDIALG GGLPKGR++EI
Sbjct: 5 KSKALEAALSQIERSFGKGSIMKLGSNENVIEVETVSTGSLSLDIALGIGGLPKGRIIEI 64
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL IAEAQ++GG C F+DAEHALDP A +GV +NLL++QPD GEQ
Sbjct: 65 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 124
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 125 ALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 184
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+ EE +G+Q
Sbjct: 185 SKTMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSVKEREEVVGNQT 242
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 243 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQGR 302
Query: 303 EAFKQFLVENESVREELVIKL 323
E K FL +N +V E+ + L
Sbjct: 303 ENAKGFLRDNPAVANEIEMAL 323
>gi|148559731|ref|YP_001259122.1| recombinase A [Brucella ovis ATCC 25840]
gi|148370988|gb|ABQ60967.1| protein RecA [Brucella ovis ATCC 25840]
Length = 424
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 189/324 (58%), Positives = 244/324 (75%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI +FGKGSIM LG++ + VSTGS +LDIALG GGLPKGR+VEI
Sbjct: 79 KTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIVEI 138
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH IAEAQ++GG C F+DAEHALDP A +GV ENLL++QPD GEQ
Sbjct: 139 YGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQ 198
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 199 ALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSISR 258
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+ +E +G+Q
Sbjct: 259 SNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKERDEVVGNQT 316
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 317 RVKVVKNKLAPPFKQVEFDIMYGAGVSKVGELVDLGVKAGVVEKSGAWFSYNSQRLGQGR 376
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E KQ+L +N V E+ LR+
Sbjct: 377 ENAKQYLKDNPEVAREIETTLRQN 400
>gi|237815621|ref|ZP_04594618.1| recA protein [Brucella abortus str. 2308 A]
gi|237788919|gb|EEP63130.1| recA protein [Brucella abortus str. 2308 A]
Length = 424
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 189/324 (58%), Positives = 244/324 (75%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI +FGKGSIM LG++ + VSTGS +LDIALG GGLPKGR+VEI
Sbjct: 79 KTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIVEI 138
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH IAEAQ++GG C F+DAEHALDP A +GV ENLL++QPD GEQ
Sbjct: 139 YGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQ 198
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 199 ALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSISR 258
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+ +E +G+Q
Sbjct: 259 SNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKERDEVVGNQT 316
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 317 RVKVVKNKLAPPFKQVEFDIMYGAGVSKVGELVDLGVKAGVVEKSGAWFSYNSQRLGQGR 376
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E KQ+L +N V E+ LR+
Sbjct: 377 ENAKQYLKDNPEVAREIETTLRQN 400
>gi|254692312|emb|CBA10404.1| recombinase A [Agrobacterium larrymoorei]
Length = 323
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 190/321 (59%), Positives = 245/321 (76%), Gaps = 3/321 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI SFGKGSIM LG + V VSTGS +LDIALG GGLPKGR++EI
Sbjct: 5 KSKALEAALSQIERSFGKGSIMKLGSNENVIEVETVSTGSLSLDIALGIGGLPKGRIIEI 64
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL IAEAQ++GG C F+DAEHALDP A +GV +NLL++QPD GEQ
Sbjct: 65 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 124
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 125 ALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 184
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+ EE +G+Q
Sbjct: 185 SKTMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSVKEREEVVGNQT 242
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 243 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQGR 302
Query: 303 EAFKQFLVENESVREELVIKL 323
E K FL +N +V E+ + L
Sbjct: 303 ENAKGFLRDNPAVANEIEMAL 323
>gi|390451215|ref|ZP_10236794.1| recombinase A [Nitratireductor aquibiodomus RA22]
gi|389661356|gb|EIM72975.1| recombinase A [Nitratireductor aquibiodomus RA22]
Length = 361
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 191/342 (55%), Positives = 252/342 (73%), Gaps = 5/342 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI +FGKGSIM LG + + +STGS LDIALG GGLP+GR++EI
Sbjct: 16 KTKALDAALSQIERAFGKGSIMRLGANDQVVEIETISTGSLGLDIALGVGGLPRGRIIEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH +AEAQ++GG C FIDAEHALDP A +GV ENLL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALHTVAEAQKKGGICGFIDAEHALDPVYARKLGVDLENLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+VVDSVAAL P+ E++GEMGD+ MQARLMSQALRKL+ S+S
Sbjct: 136 ALEICDTLVRSGALDVIVVDSVAALTPRAEIEGEMGDSLPGMQARLMSQALRKLTASISR 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+T++IFINQ+R K+ FG P E T GGNALKFY+SVRL+I+RIG VK +E +G+Q
Sbjct: 196 SKTMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYSSVRLDIRRIGSVKDRDEVVGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
+K+VKNK+APPFK +F++ +G+G+S+ E+IDL +K K+GA F+YN + +G+
Sbjct: 254 RIKVVKNKMAPPFKQVEFDIMYGEGVSKTGELIDLGVKAGIVEKSGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK--LVVDHKEPQTAVTDED 342
E KQFL +N +E+ + LR+ L+ + T D+D
Sbjct: 314 ENAKQFLHDNPEAAQEIELALRQNAGLIAEKFLDDTGPGDQD 355
>gi|261325290|ref|ZP_05964487.1| recombinase A [Brucella neotomae 5K33]
gi|261301270|gb|EEY04767.1| recombinase A [Brucella neotomae 5K33]
Length = 348
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 189/324 (58%), Positives = 244/324 (75%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI +FGKGSIM LG++ + VSTGS +LDIALG GGLPKGR+VEI
Sbjct: 3 KTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIVEI 62
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH IAEAQ++GG C F+DAEHALDP A +GV ENLL++QPD GEQ
Sbjct: 63 YGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQ 122
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 123 ALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSISR 182
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+ +E +G+Q
Sbjct: 183 SNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKERDEVVGNQT 240
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 241 RVKVVKNKLAPPFKQVEFDIMYGAGVSKVGELVDLGVKAGVVEKSGAWFSYNSQRLGQGR 300
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E KQ+L +N V E+ LR+
Sbjct: 301 ENAKQYLKDNPEVAREIETTLRQN 324
>gi|405382935|ref|ZP_11036711.1| protein RecA [Rhizobium sp. CF142]
gi|397320696|gb|EJJ25128.1| protein RecA [Rhizobium sp. CF142]
Length = 363
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/331 (58%), Positives = 248/331 (74%), Gaps = 5/331 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI SFGKGSIM LG + + + VSTGS +LDIALG GGLPKGR++EI
Sbjct: 16 KSKALEAALSQIERSFGKGSIMKLGSNESIVEIETVSTGSLSLDIALGIGGLPKGRIIEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL IAEAQ++GG C F+DAEHALDP A +GV +NLL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 136 ALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+ EE IG+Q
Sbjct: 196 SNTMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGQVKEREEVIGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E+IDL +K K+GA F+YN + +G+
Sbjct: 254 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELIDLGVKAGIVEKSGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK--LVVDH 331
E K FL +N + E+ LR+ L+ D
Sbjct: 314 ENAKIFLRDNPDLAREIETGLRQNAGLIADR 344
>gi|153009316|ref|YP_001370531.1| recombinase A [Ochrobactrum anthropi ATCC 49188]
gi|166220662|sp|A6X0E8.1|RECA_OCHA4 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|151561204|gb|ABS14702.1| recA protein [Ochrobactrum anthropi ATCC 49188]
Length = 361
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 188/324 (58%), Positives = 243/324 (75%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI +FGKGSIM LG++ + V TGS +LDIALG GGLPKGR+VEI
Sbjct: 16 KTKALDAALSQIERAFGKGSIMRLGKNAPVIEIETVPTGSLSLDIALGVGGLPKGRIVEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH IAEAQ++GG C F+DAEHALDP A +GV ENLL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 136 ALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISR 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+ +E +G+Q
Sbjct: 196 SNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKERDEVVGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 254 RVKVVKNKLAPPFKQVEFDIMYGAGVSKTGELVDLGVKAGVVEKSGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E KQ+L +N V E+ LR+
Sbjct: 314 ENAKQYLKDNPEVAREIETTLRQN 337
>gi|23502079|ref|NP_698206.1| recombinase A [Brucella suis 1330]
gi|62290113|ref|YP_221906.1| recombinase A [Brucella abortus bv. 1 str. 9-941]
gi|82700036|ref|YP_414610.1| recombinase A [Brucella melitensis biovar Abortus 2308]
gi|161619157|ref|YP_001593044.1| recombinase A [Brucella canis ATCC 23365]
gi|189024351|ref|YP_001935119.1| recombinase A [Brucella abortus S19]
gi|225852698|ref|YP_002732931.1| recombinase A [Brucella melitensis ATCC 23457]
gi|229220681|ref|NP_539704.2| recombinase A [Brucella melitensis bv. 1 str. 16M]
gi|260546662|ref|ZP_05822401.1| recombinase A [Brucella abortus NCTC 8038]
gi|260565545|ref|ZP_05836029.1| recombinase A [Brucella melitensis bv. 1 str. 16M]
gi|260566268|ref|ZP_05836738.1| recombinase A [Brucella suis bv. 4 str. 40]
gi|260754946|ref|ZP_05867294.1| recombinase A [Brucella abortus bv. 6 str. 870]
gi|261214198|ref|ZP_05928479.1| recombinase A [Brucella abortus bv. 3 str. Tulya]
gi|261219550|ref|ZP_05933831.1| recombinase A [Brucella ceti M13/05/1]
gi|261314076|ref|ZP_05953273.1| recombinase [Brucella pinnipedialis M163/99/10]
gi|261317836|ref|ZP_05957033.1| recombinase A [Brucella pinnipedialis B2/94]
gi|261322045|ref|ZP_05961242.1| recombinase A [Brucella ceti M644/93/1]
gi|261752510|ref|ZP_05996219.1| recombinase A [Brucella suis bv. 5 str. 513]
gi|261755169|ref|ZP_05998878.1| recombinase A [Brucella suis bv. 3 str. 686]
gi|261758393|ref|ZP_06002102.1| recombinase A [Brucella sp. F5/99]
gi|265984260|ref|ZP_06096995.1| recombinase A [Brucella sp. 83/13]
gi|265999433|ref|ZP_05466343.2| recombinase A [Brucella melitensis bv. 2 str. 63/9]
gi|306838011|ref|ZP_07470869.1| recA protein [Brucella sp. NF 2653]
gi|306844103|ref|ZP_07476697.1| recA protein [Brucella inopinata BO1]
gi|340790820|ref|YP_004756285.1| recombinase A [Brucella pinnipedialis B2/94]
gi|376280873|ref|YP_005154879.1| recombinase A [Brucella suis VBI22]
gi|384224867|ref|YP_005616031.1| recombinase A [Brucella suis 1330]
gi|423166703|ref|ZP_17153406.1| protein recA [Brucella abortus bv. 1 str. NI435a]
gi|423170923|ref|ZP_17157598.1| protein recA [Brucella abortus bv. 1 str. NI474]
gi|423172995|ref|ZP_17159666.1| protein recA [Brucella abortus bv. 1 str. NI486]
gi|423178312|ref|ZP_17164956.1| protein recA [Brucella abortus bv. 1 str. NI488]
gi|423180353|ref|ZP_17166994.1| protein recA [Brucella abortus bv. 1 str. NI010]
gi|423183485|ref|ZP_17170122.1| protein recA [Brucella abortus bv. 1 str. NI016]
gi|423185575|ref|ZP_17172189.1| protein recA [Brucella abortus bv. 1 str. NI021]
gi|423188710|ref|ZP_17175320.1| protein recA [Brucella abortus bv. 1 str. NI259]
gi|54039031|sp|P65976.1|RECA_BRUSU RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|54041791|sp|P65975.1|RECA_BRUME RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|68067733|sp|Q04761.2|RECA_BRUAB RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|123768490|sp|Q2YRU7.1|RECA_BRUA2 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|189039591|sp|A9M5L8.1|RECA_BRUC2 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|238689380|sp|B2S648.1|RECA_BRUA1 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|254790424|sp|C0RJG9.1|RECA_BRUMB RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|23348037|gb|AAN30121.1| recA protein [Brucella suis 1330]
gi|62196245|gb|AAX74545.1| RecA, recA protein [Brucella abortus bv. 1 str. 9-941]
gi|82616137|emb|CAJ11180.1| RecA bacterial DNA recombination protein:ATP/GTP-binding site motif
A (P-loop):AAA ATPase [Brucella melitensis biovar
Abortus 2308]
gi|161335968|gb|ABX62273.1| recA protein [Brucella canis ATCC 23365]
gi|189019923|gb|ACD72645.1| RecA bacterial DNA recombination protein [Brucella abortus S19]
gi|225641063|gb|ACO00977.1| recA protein [Brucella melitensis ATCC 23457]
gi|260095712|gb|EEW79589.1| recombinase A [Brucella abortus NCTC 8038]
gi|260151613|gb|EEW86707.1| recombinase A [Brucella melitensis bv. 1 str. 16M]
gi|260155786|gb|EEW90866.1| recombinase A [Brucella suis bv. 4 str. 40]
gi|260675054|gb|EEX61875.1| recombinase A [Brucella abortus bv. 6 str. 870]
gi|260915805|gb|EEX82666.1| recombinase A [Brucella abortus bv. 3 str. Tulya]
gi|260924639|gb|EEX91207.1| recombinase A [Brucella ceti M13/05/1]
gi|261294735|gb|EEX98231.1| recombinase A [Brucella ceti M644/93/1]
gi|261297059|gb|EEY00556.1| recombinase A [Brucella pinnipedialis B2/94]
gi|261303102|gb|EEY06599.1| recombinase [Brucella pinnipedialis M163/99/10]
gi|261738377|gb|EEY26373.1| recombinase A [Brucella sp. F5/99]
gi|261742263|gb|EEY30189.1| recombinase A [Brucella suis bv. 5 str. 513]
gi|261744922|gb|EEY32848.1| recombinase A [Brucella suis bv. 3 str. 686]
gi|263093939|gb|EEZ17873.1| recombinase A [Brucella melitensis bv. 2 str. 63/9]
gi|264662852|gb|EEZ33113.1| recombinase A [Brucella sp. 83/13]
gi|306275546|gb|EFM57278.1| recA protein [Brucella inopinata BO1]
gi|306406935|gb|EFM63156.1| recA protein [Brucella sp. NF 2653]
gi|340559279|gb|AEK54517.1| recombinase A [Brucella pinnipedialis B2/94]
gi|343383047|gb|AEM18539.1| recombinase A [Brucella suis 1330]
gi|358258472|gb|AEU06207.1| recombinase A [Brucella suis VBI22]
gi|374539501|gb|EHR11005.1| protein recA [Brucella abortus bv. 1 str. NI474]
gi|374542934|gb|EHR14418.1| protein recA [Brucella abortus bv. 1 str. NI435a]
gi|374543550|gb|EHR15032.1| protein recA [Brucella abortus bv. 1 str. NI486]
gi|374545551|gb|EHR17012.1| protein recA [Brucella abortus bv. 1 str. NI488]
gi|374548917|gb|EHR20364.1| protein recA [Brucella abortus bv. 1 str. NI010]
gi|374549548|gb|EHR20991.1| protein recA [Brucella abortus bv. 1 str. NI016]
gi|374558368|gb|EHR29761.1| protein recA [Brucella abortus bv. 1 str. NI259]
gi|374559666|gb|EHR31051.1| protein recA [Brucella abortus bv. 1 str. NI021]
Length = 361
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 189/324 (58%), Positives = 244/324 (75%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI +FGKGSIM LG++ + VSTGS +LDIALG GGLPKGR+VEI
Sbjct: 16 KTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIVEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH IAEAQ++GG C F+DAEHALDP A +GV ENLL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 136 ALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSISR 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+ +E +G+Q
Sbjct: 196 SNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKERDEVVGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 254 RVKVVKNKLAPPFKQVEFDIMYGAGVSKVGELVDLGVKAGVVEKSGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E KQ+L +N V E+ LR+
Sbjct: 314 ENAKQYLKDNPEVAREIETTLRQN 337
>gi|225627673|ref|ZP_03785710.1| recA protein [Brucella ceti str. Cudo]
gi|225617678|gb|EEH14723.1| recA protein [Brucella ceti str. Cudo]
Length = 424
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 189/324 (58%), Positives = 244/324 (75%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI +FGKGSIM LG++ + VSTGS +LDIALG GGLPKGR+VEI
Sbjct: 79 KTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIVEI 138
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH IAEAQ++GG C F+DAEHALDP A +GV ENLL++QPD GEQ
Sbjct: 139 YGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQ 198
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 199 ALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSISR 258
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+ +E +G+Q
Sbjct: 259 SNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKERDEVVGNQT 316
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 317 RVKVVKNKLAPPFKQVEFDIMYGAGVSKVGELVDLGVKAGVVEKSGAWFSYNSQRLGQGR 376
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E KQ+L +N V E+ LR+
Sbjct: 377 ENAKQYLKDNPEVAREIETTLRQN 400
>gi|378826124|ref|YP_005188856.1| recombinase A [Sinorhizobium fredii HH103]
gi|365179176|emb|CCE96031.1| RecA protein [Sinorhizobium fredii HH103]
Length = 361
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/331 (58%), Positives = 247/331 (74%), Gaps = 5/331 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI SFGKGSIM LG + + VSTGS LDIALG GGLPKGR+VEI
Sbjct: 16 KSKALEAALSQIERSFGKGSIMKLGSKDSVIEIETVSTGSLGLDIALGIGGLPKGRIVEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL IAEAQ++GG C F+DAEHALDP A +GV ENLL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALQTIAEAQKKGGICGFVDAEHALDPIYARKLGVDLENLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+VVDSVAALVP+ E++GEMGD+ MQARLMSQALRKL+ S+S
Sbjct: 136 ALEITDTLVRSGAIDVLVVDSVAALVPRAEIEGEMGDSLPGMQARLMSQALRKLTASISK 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+ EE +G+Q
Sbjct: 196 SNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSVKEREEVVGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E+IDL +K K+GA F+YN + +G+
Sbjct: 254 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELIDLGVKAGIVEKSGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK--LVVDH 331
E K FL +N + E+ + LR+ L+ D
Sbjct: 314 ENAKLFLRDNPDLLREIEMALRQNAGLIADK 344
>gi|422016606|ref|ZP_16363188.1| recombinase A [Providencia burhodogranariea DSM 19968]
gi|414092641|gb|EKT54315.1| recombinase A [Providencia burhodogranariea DSM 19968]
Length = 355
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 199/347 (57%), Positives = 251/347 (72%), Gaps = 6/347 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG T V +STGS +LD+ALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRT-MDVETISTGSLSLDVALGAGGLPLGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR G C FIDAEHALDP A+ +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQRSGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV++VDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK GEE +GS+
Sbjct: 185 TSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKNGEEIVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+ E+IDL +KHK KAGA ++YN D+ +G
Sbjct: 243 TRVKVVKNKIAAPFKQAEFQILYGEGINTYGELIDLGVKHKLIEKAGAWYSYNGDKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTD--EDSTEE 346
K +L E+ ++ +E+ KLRE L+ E ++A TD DS EE
Sbjct: 303 KANSTTYLKEHPAIADEIDKKLREMLLTHTGEFKSAATDFINDSDEE 349
>gi|190892009|ref|YP_001978551.1| recombinase A [Rhizobium etli CIAT 652]
gi|417105487|ref|ZP_11961728.1| recombinase A protein [Rhizobium etli CNPAF512]
gi|238692491|sp|B3PPU4.1|RECA_RHIE6 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|190697288|gb|ACE91373.1| recombinase A protein [Rhizobium etli CIAT 652]
gi|327190520|gb|EGE57614.1| recombinase A protein [Rhizobium etli CNPAF512]
Length = 362
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 190/331 (57%), Positives = 247/331 (74%), Gaps = 5/331 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI SFGKGSIM LG + + +STGS LDIALG GGLPKGR++EI
Sbjct: 16 KSKALEAALSQIERSFGKGSIMKLGSNENVIEIETISTGSLGLDIALGVGGLPKGRIIEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL IAE+Q++GG C F+DAEHALDP A +GV +NLL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALQTIAESQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 136 ALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+ EE IG+Q
Sbjct: 196 SNTMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSVKEREEVIGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 254 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK--LVVDH 331
E K FL +N + E+ + LR+ L+ D
Sbjct: 314 ENAKTFLRDNPDLAREIELALRQNAGLIADR 344
>gi|374087442|gb|AEY82524.1| RecA [Rhizobium sp. LPU83]
Length = 361
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 191/331 (57%), Positives = 248/331 (74%), Gaps = 5/331 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI SFGKGSIM LG + + + VSTGS LDIALG GGLPKGR++EI
Sbjct: 16 KSKALEAALSQIERSFGKGSIMKLGSNESVVEIETVSTGSLGLDIALGIGGLPKGRIIEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL IAE+Q++GG C F+DAEHALDP A +GV +NLL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALQTIAESQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 136 ALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+ EE IG+Q
Sbjct: 196 SKTMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAVKEREEVIGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 254 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK--LVVDH 331
E K FL +N V E+ LR+ L+ D
Sbjct: 314 ENAKIFLRDNPEVLREIEASLRQNAGLIADR 344
>gi|90818668|emb|CAJ32639.1| recombinase A [Ochrobactrum tritici]
Length = 355
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 188/324 (58%), Positives = 243/324 (75%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI +FGKGSIM LG++ + V TGS +LDIALG GGLPKGR+VEI
Sbjct: 16 KTKALDAALSQIERAFGKGSIMRLGKNAPVIEIETVPTGSLSLDIALGVGGLPKGRIVEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH IAEAQ++GG C F+DAEHALDP A +GV ENLL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 136 ALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISR 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+ +E +G+Q
Sbjct: 196 SNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKERDEVVGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 254 RVKVVKNKLAPPFKQVEFDIMYGAGVSKTGELVDLGVKAGVVEKSGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E KQ+L +N V E+ LR+
Sbjct: 314 ENAKQYLKDNPEVAREIETTLRQN 337
>gi|260758162|ref|ZP_05870510.1| recombinase A [Brucella abortus bv. 4 str. 292]
gi|260761988|ref|ZP_05874331.1| recombinase A [Brucella abortus bv. 2 str. 86/8/59]
gi|260668480|gb|EEX55420.1| recombinase A [Brucella abortus bv. 4 str. 292]
gi|260672420|gb|EEX59241.1| recombinase A [Brucella abortus bv. 2 str. 86/8/59]
Length = 420
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 189/324 (58%), Positives = 244/324 (75%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI +FGKGSIM LG++ + VSTGS +LDIALG GGLPKGR+VEI
Sbjct: 75 KTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIVEI 134
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH IAEAQ++GG C F+DAEHALDP A +GV ENLL++QPD GEQ
Sbjct: 135 YGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQ 194
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 195 ALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSISR 254
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+ +E +G+Q
Sbjct: 255 SNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKERDEVVGNQT 312
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 313 RVKVVKNKLAPPFKQVEFDIMYGAGVSKVGELVDLGVKAGVVEKSGAWFSYNSQRLGQGR 372
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E KQ+L +N V E+ LR+
Sbjct: 373 ENAKQYLKDNPEVAREIETTLRQN 396
>gi|306840332|ref|ZP_07473104.1| recA protein [Brucella sp. BO2]
gi|306289731|gb|EFM60920.1| recA protein [Brucella sp. BO2]
Length = 389
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 189/324 (58%), Positives = 244/324 (75%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI +FGKGSIM LG++ + VSTGS +LDIALG GGLPKGR+VEI
Sbjct: 44 KTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIVEI 103
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH IAEAQ++GG C F+DAEHALDP A +GV ENLL++QPD GEQ
Sbjct: 104 YGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQ 163
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 164 ALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSISR 223
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+ +E +G+Q
Sbjct: 224 SNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKERDEVVGNQT 281
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 282 RVKVVKNKLAPPFKQVEFDIMYGAGVSKVGELVDLGVKAGVVEKSGAWFSYNSQRLGQGR 341
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E KQ+L +N V E+ LR+
Sbjct: 342 ENAKQYLKDNPEVAREIETTLRQN 365
>gi|227822194|ref|YP_002826165.1| recombinase A [Sinorhizobium fredii NGR234]
gi|254790442|sp|C3MD93.1|RECA_RHISN RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|227341194|gb|ACP25412.1| RecA protein [Sinorhizobium fredii NGR234]
Length = 361
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/331 (58%), Positives = 247/331 (74%), Gaps = 5/331 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI SFGKGSIM LG + + VSTGS LDIALG GGLPKGR++EI
Sbjct: 16 KSKALEAALSQIERSFGKGSIMKLGSKDSVIEIETVSTGSLGLDIALGIGGLPKGRIIEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL IAEAQ++GG C F+DAEHALDP A +GV ENLL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALQTIAEAQKKGGICGFVDAEHALDPVYARKLGVDLENLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+VVDSVAALVP+ E++GEMGD+ MQARLMSQALRKL+ S+S
Sbjct: 136 ALEITDTLVRSGAIDVLVVDSVAALVPRAEIEGEMGDSLPGMQARLMSQALRKLTASISK 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+ EE +G+Q
Sbjct: 196 SNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSVKEREEVVGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E+IDL +K K+GA F+YN + +G+
Sbjct: 254 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELIDLGVKAGIVEKSGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK--LVVDH 331
E K FL +N + E+ + LR+ L+ D
Sbjct: 314 ENAKLFLRDNPDLLREIEMALRQNAGLIADK 344
>gi|256369626|ref|YP_003107136.1| recombinase A [Brucella microti CCM 4915]
gi|255999788|gb|ACU48187.1| recombinase A [Brucella microti CCM 4915]
Length = 361
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 189/324 (58%), Positives = 244/324 (75%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI +FGKGSIM LG++ + VSTGS +LDIALG GGLPKGR+VEI
Sbjct: 16 KTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIVEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH IAEAQ++GG C F+DAEHALDP A +GV ENLL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 136 ALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSISR 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+ +E +G+Q
Sbjct: 196 SNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKERDEVVGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 254 RVKVVKNKLAPPFKQVEFDIMYGAGVSKVGELVDLGVKAGVVEKSGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E KQ+L +N V E+ LR+
Sbjct: 314 ENAKQYLKDNPEVAREIETMLRQN 337
>gi|56459851|ref|YP_155132.1| recombinase A [Idiomarina loihiensis L2TR]
gi|76363333|sp|Q5QUB8.1|RECA_IDILO RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|56178861|gb|AAV81583.1| RecA recombinase [Idiomarina loihiensis L2TR]
Length = 372
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/348 (56%), Positives = 253/348 (72%), Gaps = 11/348 (3%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL AL QI FGKGSIM LG + T + VSTGS LDIALG GGLP GRVVEIYGP
Sbjct: 8 ALDAALGQIERQFGKGSIMRLGDNQT-LDIDSVSTGSLGLDIALGIGGLPFGRVVEIYGP 66
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTT+ L VIAEAQ+ G C F+DAEHALDP AE +GV ++LL++QPD GEQAL
Sbjct: 67 ESSGKTTMTLEVIAEAQKMGKTCAFVDAEHALDPIYAEALGVNVDDLLISQPDTGEQALE 126
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ D L+RSG+VD+V+VDSVAAL PK E++GEMGD+H+ +QARLMSQALRKL+ ++ S T
Sbjct: 127 ICDMLVRSGAVDIVIVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTSNIKKSNT 186
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
+ IFINQ+R K+ FG P E T GGNALKFY+SVRL+I+R G +K+G+E +G++ VK
Sbjct: 187 MCIFINQIRMKIGVM-FGNP-ETTTGGNALKFYSSVRLDIRRTGALKEGDEVVGNETRVK 244
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGKEAF 305
+VKNK+APPFK A F++ +GKGIS+E E+IDL +KHK KAGA ++YN D+ +GK
Sbjct: 245 VVKNKVAPPFKEAHFQILYGKGISKEGELIDLGVKHKMVDKAGAWYSYNGDKIGQGKANS 304
Query: 306 KQFLVENESVREELVIKLR-------EKLVVDHKEPQTAVTDEDSTEE 346
+FL +N + +EL ++R EK + +E + A ED+ E
Sbjct: 305 MKFLQDNPKIADELEGRIRELLLSKPEKRTKEIREAERAAAKEDAKSE 352
>gi|89473563|emb|CAJ34594.1| recombinase A [Brucella abortus]
gi|89473565|emb|CAJ34595.1| recombinase A [Brucella canis]
gi|89473567|emb|CAJ34596.1| recombinase A [Brucella neotomae]
gi|89473569|emb|CAJ34597.1| recombinase A [Brucella ovis]
gi|89473571|emb|CAJ34598.1| recombinase A [Brucella suis 1330]
gi|89473573|emb|CAJ34599.1| recombinase A [Brucella pinnipedialis]
gi|89473575|emb|CAJ34600.1| recombinase A [Brucella ceti]
gi|90818664|emb|CAJ32637.1| recombinase A [Brucella melitensis]
Length = 355
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 189/324 (58%), Positives = 244/324 (75%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI +FGKGSIM LG++ + VSTGS +LDIALG GGLPKGR+VEI
Sbjct: 16 KTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIVEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH IAEAQ++GG C F+DAEHALDP A +GV ENLL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 136 ALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSISR 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+ +E +G+Q
Sbjct: 196 SNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKERDEVVGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 254 RVKVVKNKLAPPFKQVEFDIMYGAGVSKVGELVDLGVKAGVVEKSGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E KQ+L +N V E+ LR+
Sbjct: 314 ENAKQYLKDNPEVAREIETTLRQN 337
>gi|163843467|ref|YP_001627871.1| recombinase A [Brucella suis ATCC 23445]
gi|189039592|sp|B0CH00.1|RECA_BRUSI RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|163674190|gb|ABY38301.1| recA protein [Brucella suis ATCC 23445]
Length = 361
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 189/324 (58%), Positives = 244/324 (75%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI +FGKGSIM LG++ + VSTGS +LDIALG GGLPKGR+VEI
Sbjct: 16 KTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIVEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH IAEAQ++GG C F+DAEHALDP A +GV ENLL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 136 ALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSISR 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+ +E +G+Q
Sbjct: 196 SNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKERDEVMGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 254 RVKVVKNKLAPPFKQVEFDIMYGAGVSKVGELVDLGVKAGVVEKSGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E KQ+L +N V E+ LR+
Sbjct: 314 ENAKQYLKDNPEVAREIETTLRQN 337
>gi|443497939|dbj|BAM76762.1| recombinase A, partial [Ochrobactrum anthropi]
Length = 340
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 188/324 (58%), Positives = 243/324 (75%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI +FGKGSIM LG++ + V TGS +LDIALG GGLPKGR+VEI
Sbjct: 8 KTKALDAALSQIERAFGKGSIMRLGKNAPVIEIETVPTGSLSLDIALGVGGLPKGRIVEI 67
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH IAEAQ++GG C F+DAEHALDP A +GV ENLL++QPD GEQ
Sbjct: 68 YGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQ 127
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 128 ALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISR 187
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+ +E +G+Q
Sbjct: 188 SNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKERDEVVGNQT 245
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 246 RVKVVKNKLAPPFKQVEFDIMYGAGVSKTGELVDLGVKAGVVEKSGAWFSYNSQRLGQGR 305
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E KQ+L +N V E+ LR+
Sbjct: 306 ENAKQYLKDNPEVAREIETTLRQN 329
>gi|83309721|ref|YP_419985.1| recombinase A [Magnetospirillum magneticum AMB-1]
gi|123754202|sp|Q2W9P9.1|RECA_MAGSA RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|82944562|dbj|BAE49426.1| RecA protein [Magnetospirillum magneticum AMB-1]
Length = 359
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 188/321 (58%), Positives = 243/321 (75%), Gaps = 3/321 (0%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL+ A+ QI +FGKGSIM LG VVSTGS LD+ALG GG+P+GR++E+YGP
Sbjct: 19 ALEAAVSQIERAFGKGSIMKLGGKDQVVETEVVSTGSLGLDVALGIGGVPRGRIIEVYGP 78
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTTLALH+IAEAQ++GG C F+DAEHALDPS A +GV + LL++QPD GEQAL
Sbjct: 79 ESSGKTTLALHIIAEAQKKGGTCAFVDAEHALDPSYARKLGVNLDELLISQPDAGEQALE 138
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ DTL+RSG+VDV+VVDSVAALVP+ EL+GEMGD HM + ARLMSQALRKL+ S+S S+T
Sbjct: 139 IADTLVRSGAVDVLVVDSVAALVPRAELEGEMGDNHMGLHARLMSQALRKLTGSVSKSKT 198
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
I+IFINQ+R K+ FG P E T GGNALKFYASVR+ I+R+G +K +E +G+Q VK
Sbjct: 199 IVIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRMEIRRVGAIKDRDEVVGNQTRVK 256
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYND-RNFRGKEAF 305
+VKNKLAPPFK F++ +G+GIS+ E+IDL +K K+GA F+YN R +G+E
Sbjct: 257 VVKNKLAPPFKVVDFDIMYGEGISKMGELIDLGVKANVVEKSGAWFSYNSTRIGQGRENA 316
Query: 306 KQFLVENESVREELVIKLREK 326
K FL EN ++ E+ +R+
Sbjct: 317 KTFLRENPAMAAEIEGAIRQN 337
>gi|418403219|ref|ZP_12976714.1| recombinase A [Sinorhizobium meliloti CCNWSX0020]
gi|359502831|gb|EHK75398.1| recombinase A [Sinorhizobium meliloti CCNWSX0020]
Length = 361
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/331 (58%), Positives = 246/331 (74%), Gaps = 5/331 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI SFGKGSIM LG + + VSTGS LDIALG GGLPKGR+VEI
Sbjct: 16 KSKALEAALSQIERSFGKGSIMKLGAKDSVVEIETVSTGSLGLDIALGIGGLPKGRIVEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL IAEAQ++GG C F+DAEHALDP A +GV ENLL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALQTIAEAQKKGGICGFVDAEHALDPVYARKLGVDLENLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++D++V+DSVAALVP+ E++GEMGD+ MQARLMSQALRKL+ S+S
Sbjct: 136 ALEITDTLVRSGAIDILVIDSVAALVPRAEIEGEMGDSLPGMQARLMSQALRKLTASISK 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+ EE +G+Q
Sbjct: 196 SNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSVKEREEVVGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E+IDL +K K+GA F+YN + +G+
Sbjct: 254 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELIDLGVKAGIVEKSGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK--LVVDH 331
E K FL EN + E+ LR+ L+ D
Sbjct: 314 ENAKLFLRENPELLREIETALRQNAGLIADR 344
>gi|297248509|ref|ZP_06932227.1| recombinase A [Brucella abortus bv. 5 str. B3196]
gi|17982728|gb|AAL51968.1| reca protein [Brucella melitensis bv. 1 str. 16M]
gi|297175678|gb|EFH35025.1| recombinase A [Brucella abortus bv. 5 str. B3196]
Length = 378
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 189/324 (58%), Positives = 244/324 (75%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI +FGKGSIM LG++ + VSTGS +LDIALG GGLPKGR+VEI
Sbjct: 33 KTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIVEI 92
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH IAEAQ++GG C F+DAEHALDP A +GV ENLL++QPD GEQ
Sbjct: 93 YGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQ 152
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 153 ALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSISR 212
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+ +E +G+Q
Sbjct: 213 SNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKERDEVVGNQT 270
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 271 RVKVVKNKLAPPFKQVEFDIMYGAGVSKVGELVDLGVKAGVVEKSGAWFSYNSQRLGQGR 330
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E KQ+L +N V E+ LR+
Sbjct: 331 ENAKQYLKDNPEVAREIETTLRQN 354
>gi|354952162|emb|CCE46008.1| RecA protein, partial [Brucella sp. 152]
Length = 329
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 189/323 (58%), Positives = 244/323 (75%), Gaps = 3/323 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI +FGKGSIM LG++ + VSTGS +LDIALG GGLPKGR+VEI
Sbjct: 9 KTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIVEI 68
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH IAEAQ++GG C F+DAEHALDP A +GV ENLL++QPD GEQ
Sbjct: 69 YGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQ 128
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 129 ALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSISR 188
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+ +E +G+Q
Sbjct: 189 SNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKERDEVVGNQT 246
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 247 RVKVVKNKLAPPFKQVEFDIMYGAGVSKVGELVDLGVKAGVVEKSGAWFSYNSQRLGQGR 306
Query: 303 EAFKQFLVENESVREELVIKLRE 325
E KQ+L +N V E+ LR+
Sbjct: 307 ENAKQYLKDNPEVAREIETTLRQ 329
>gi|1172888|sp|P24543.2|RECA_RHIET RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|683661|emb|CAA44346.1| RecA [Rhizobium phaseoli]
Length = 361
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 191/331 (57%), Positives = 246/331 (74%), Gaps = 5/331 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI SFGKGSIM LG + + +STGS LDIALG GGLPKGR++EI
Sbjct: 16 KSKALEAALSQIERSFGKGSIMKLGSNENVIEIETISTGSLGLDIALGVGGLPKGRIIEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL IAE+Q++GG C F+DAEHALDP A +GV +NLL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALQTIAESQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 136 ALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+ EE IG+Q
Sbjct: 196 SNTMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSVKEREEVIGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E++DL +K K+GA F+YN + +G
Sbjct: 254 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQGG 313
Query: 303 EAFKQFLVENESVREELVIKLREK--LVVDH 331
E K FL +N + E+ + LRE L+ D
Sbjct: 314 ENAKTFLRDNPDLAREIELALRENAGLIADR 344
>gi|158424479|ref|YP_001525771.1| recombinase A [Azorhizobium caulinodans ORS 571]
gi|158331368|dbj|BAF88853.1| RecA protein [Azorhizobium caulinodans ORS 571]
Length = 363
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/366 (54%), Positives = 255/366 (69%), Gaps = 21/366 (5%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGSIM LG+S V +S+GS LDIALG GGLPKGR+VEI
Sbjct: 16 KTKALDAALSQIERHFGKGSIMRLGKSGKVMEVESISSGSLGLDIALGIGGLPKGRIVEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH IAEAQ++GG C FIDAEHALDP A +GV ++LL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALHTIAEAQKKGGTCAFIDAEHALDPIYARKLGVNLDDLLISQPDAGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+VVDSVAAL P+ ELDGEMGD MQARLMSQALRKL+ S+S
Sbjct: 136 ALEIADTLVRSGAIDVLVVDSVAALTPRAELDGEMGDNQPGMQARLMSQALRKLTASISK 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ +G P E T GGNALKFYASVRL+I+RIG++K+ +E +G+Q
Sbjct: 196 SNTMVIFINQIRMKIGVM-YGSP-ETTTGGNALKFYASVRLDIRRIGMIKERDEVVGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G+G+S+ E++DL ++ K+GA F+Y+ + +G+
Sbjct: 254 RVKVVKNKLAPPFKQVEFDIMYGEGVSKMGELLDLGVRAGVVEKSGAWFSYDSQRLGQGR 313
Query: 303 EAFKQFLVENESV--REELVIKLREKLVVDHKEPQTAVTDEDSTEETVSTISPDSTDEEA 360
E K FL +N V R E I+ L+ D + T SP+ D +
Sbjct: 314 ENAKTFLRQNPEVAGRIEATIRQNAGLIADQ----------------ILTGSPEDEDGDG 357
Query: 361 AAVVEA 366
A EA
Sbjct: 358 DAAAEA 363
>gi|90818656|emb|CAJ32633.1| recombinase A [Ochrobactrum anthropi]
Length = 355
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 188/324 (58%), Positives = 243/324 (75%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI +FGKGSIM LG++ + V TGS +LDIALG GGLPKGR+VEI
Sbjct: 16 KTKALDAALSQIERAFGKGSIMRLGKNAPVIEIETVPTGSLSLDIALGVGGLPKGRIVEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH IAEAQ++GG C F+DAEHALDP A +GV ENLL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 136 ALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISR 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+ +E +G+Q
Sbjct: 196 SSCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKERDEVVGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 254 RVKVVKNKLAPPFKQVEFDIMYGAGVSKTGELVDLGVKAGVVEKSGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E KQ+L +N V E+ LR+
Sbjct: 314 ENAKQYLKDNPEVAREIETTLRQN 337
>gi|132236|sp|P24074.1|RECA_RHILV RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|581514|emb|CAA42578.1| RecA protein [Rhizobium leguminosarum]
Length = 351
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 190/331 (57%), Positives = 245/331 (74%), Gaps = 5/331 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI SFGKGSIM LG + + +STGS LDIALG GGLP+GR++EI
Sbjct: 3 KSKALEAALSQIERSFGKGSIMKLGSNENVVEIETISTGSLGLDIALGVGGLPRGRIIEI 62
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL IAEAQ++GG C F+DAEHALDP A +GV +NLL++QPD GEQ
Sbjct: 63 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 122
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG VDV+VVDSVAAL P+ E++GEMGD +QARLMSQALRKL+ S+S
Sbjct: 123 ALEITDTLVRSGRVDVLVVDSVAALTPRAEIEGEMGDTVPGLQARLMSQALRKLTASISK 182
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+ EE IG+Q
Sbjct: 183 SNTMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAVKEREEVIGNQT 240
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 241 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQGR 300
Query: 303 EAFKQFLVENESVREELVIKLREK--LVVDH 331
E K FL +N + E+ + LR+ L+ D
Sbjct: 301 ENAKTFLRDNPDLAREIELSLRQNAGLIADR 331
>gi|89473577|emb|CAJ34601.1| recombinase A [Ochrobactrum lupini]
gi|89473579|emb|CAJ34602.1| recombinase A [Ochrobactrum anthropi]
gi|90818638|emb|CAJ32624.1| recombinase A [Ochrobactrum anthropi ATCC 49188]
gi|90818640|emb|CAJ32625.1| recombinase A [Ochrobactrum anthropi]
gi|90818642|emb|CAJ32626.1| recombinase A [Ochrobactrum tritici]
gi|90818654|emb|CAJ32632.1| recombinase A [Ochrobactrum anthropi]
gi|90818660|emb|CAJ32635.1| recombinase A [Ochrobactrum anthropi]
gi|90818662|emb|CAJ32636.1| recombinase A [Ochrobactrum anthropi]
gi|90818674|emb|CAJ43897.1| recombinase A [Ochrobactrum anthropi]
gi|343131440|gb|AEL89247.1| recombinase A, partial [Ochrobactrum anthropi]
Length = 355
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 188/324 (58%), Positives = 243/324 (75%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI +FGKGSIM LG++ + V TGS +LDIALG GGLPKGR+VEI
Sbjct: 16 KTKALDAALSQIERAFGKGSIMRLGKNAPVIEIETVPTGSLSLDIALGVGGLPKGRIVEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH IAEAQ++GG C F+DAEHALDP A +GV ENLL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 136 ALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISR 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+ +E +G+Q
Sbjct: 196 SNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKERDEVVGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 254 RVKVVKNKLAPPFKQVEFDIMYGAGVSKTGELVDLGVKAGVVEKSGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E KQ+L +N V E+ LR+
Sbjct: 314 ENAKQYLKDNPEVAREIETTLRQN 337
>gi|417859682|ref|ZP_12504738.1| recombinase A [Agrobacterium tumefaciens F2]
gi|338822746|gb|EGP56714.1| recombinase A [Agrobacterium tumefaciens F2]
Length = 363
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 191/331 (57%), Positives = 247/331 (74%), Gaps = 5/331 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI SFGKGSIM LG + V VSTGS +LDIALG GGLPKGR+VEI
Sbjct: 16 KSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGRIVEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL IAEAQ++GG C F+DAEHALDP A +GV +NLL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VD++VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 136 ALEITDTLVRSGAVDILVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+ ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+ EE +G+Q
Sbjct: 196 SKCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAVKEREEVVGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 254 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK--LVVDH 331
E K FL +N E+ + LR+ L+ D
Sbjct: 314 ENAKTFLRDNPETANEIELALRQNAGLIADR 344
>gi|308187886|ref|YP_003932017.1| protein recA (Recombinase A) [Pantoea vagans C9-1]
gi|308058396|gb|ADO10568.1| Protein recA (Recombinase A) [Pantoea vagans C9-1]
Length = 356
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/352 (55%), Positives = 249/352 (70%), Gaps = 4/352 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VEI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVEI 65
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A+ +GV ENLL +QPD GEQ
Sbjct: 66 YGPESSGKTTLTLQVIASAQRKGKTCAFIDAEHALDPVYAKKLGVDIENLLCSQPDTGEQ 125
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L RSG+VDV++VDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 126 ALEICDALARSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLKQ 185
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+G+ +GS+
Sbjct: 186 SNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAIKEGDNVVGSET 243
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGK 302
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +KHK KAGA ++YN D+ +GK
Sbjct: 244 RVKVVKNKIAAPFKQAEFQIMYGEGINTFGELVDLGVKHKLIEKAGAWYSYNGDKIGQGK 303
Query: 303 EAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETVSTISPD 354
FL EN +V E+ +KLRE L+ E A E+ S + D
Sbjct: 304 SNAGNFLKENAAVANEIDLKLREMLLNGADEKLAAADKSAEKEDAASEANED 355
>gi|335424601|ref|ZP_08553609.1| recombinase A [Salinisphaera shabanensis E1L3A]
gi|334888939|gb|EGM27234.1| recombinase A [Salinisphaera shabanensis E1L3A]
Length = 361
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 186/328 (56%), Positives = 246/328 (75%), Gaps = 4/328 (1%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL AL QI FGKGS+M +G T ++P +S+GS LDIALG GG P+GRV+EIYGP
Sbjct: 8 ALAAALSQIERQFGKGSVMRMGDQDTS-NIPSISSGSLTLDIALGIGGYPRGRVIEIYGP 66
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTTL L IAE Q+ GG FIDAEHALDP+ AE +GV ENLL++QPD GEQAL
Sbjct: 67 ESSGKTTLTLQAIAECQKAGGTAAFIDAEHALDPTYAEALGVDIENLLISQPDTGEQALE 126
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ D L+RS +VD+VV+DSVAAL PK E++GEMGD+H+ +QARLMSQALRKL+ ++ + T
Sbjct: 127 IADMLVRSAAVDIVVIDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKRTGT 186
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
++FINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +KKG+E IG++ VK
Sbjct: 187 TVMFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAIKKGDEVIGNETRVK 244
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGKEAF 305
+VKNK+APPF+ A+FE+ +G+G SRE EIIDL + + KAG+ ++YN DR +GK+
Sbjct: 245 VVKNKMAPPFRKAEFEILYGEGSSREGEIIDLGVANNLIEKAGSWYSYNGDRVGQGKDNA 304
Query: 306 KQFLVENESVREELVIKLREKLVVDHKE 333
+ FL +N + ++L LREKL+ ++
Sbjct: 305 RNFLKDNPEIAQQLEDSLREKLLAPKRK 332
>gi|325293276|ref|YP_004279140.1| recombinase A [Agrobacterium sp. H13-3]
gi|418408608|ref|ZP_12981924.1| recombinase A [Agrobacterium tumefaciens 5A]
gi|325061129|gb|ADY64820.1| recombinase A [Agrobacterium sp. H13-3]
gi|358005522|gb|EHJ97848.1| recombinase A [Agrobacterium tumefaciens 5A]
gi|444299298|emb|CCP29598.1| recombinase A [Agrobacterium genomosp. 1]
Length = 363
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 190/331 (57%), Positives = 248/331 (74%), Gaps = 5/331 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI SFGKGSIM LG + V +STGS +LDIALG GGLPKGR+VEI
Sbjct: 16 KSKALEAALSQIERSFGKGSIMKLGSNENVVEVETISTGSLSLDIALGIGGLPKGRIVEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL IAEAQ++GG C F+DAEHALDP A +GV +NLL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VD++VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 136 ALEITDTLVRSGAVDILVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+ ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+ EE +G+Q
Sbjct: 196 SKCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAVKEREEVVGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 254 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK--LVVDH 331
E K FL +N + E+ + LR+ L+ D
Sbjct: 314 ENAKTFLRDNPEMASEIELALRQNAGLIADR 344
>gi|407782762|ref|ZP_11129971.1| recombinase A [Oceanibaculum indicum P24]
gi|407205058|gb|EKE75035.1| recombinase A [Oceanibaculum indicum P24]
Length = 360
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 183/322 (56%), Positives = 247/322 (76%), Gaps = 3/322 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI +FGKGSIM LG+ + + +STGS LDIALG GGLP+GR++EI
Sbjct: 16 KQKALDAALGQIERAFGKGSIMKLGQRDSAVEIEAISTGSLGLDIALGIGGLPRGRIIEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH +AEAQ+ GG C F+DAEHALDP+ A +GV + LL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALHAVAEAQKVGGTCAFVDAEHALDPTYARKLGVNVDELLISQPDAGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+VVDSVAALVP+ EL+GEMGD+H+ +QARLMSQALRKL+ S+S
Sbjct: 136 ALEIADTLVRSGAIDVLVVDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKLTASISK 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+ ++IFINQ+R K+ FG P E T GG+ALKFYASVRL+I+RIG +K +E +G+Q
Sbjct: 196 SRCMVIFINQIRMKIGVM-FGNP-ETTTGGHALKFYASVRLDIRRIGAIKDKDEVVGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPF+ +F++ +G+G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 254 RVKVVKNKVAPPFRVVEFDIMYGEGVSKMGELVDLGVKANIVEKSGAWFSYNGQRIGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLR 324
E K FL EN ++ +E+ K+R
Sbjct: 314 ENAKNFLRENTAMAQEIEQKIR 335
>gi|344943375|ref|ZP_08782662.1| Protein recA [Methylobacter tundripaludum SV96]
gi|344260662|gb|EGW20934.1| Protein recA [Methylobacter tundripaludum SV96]
Length = 345
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/342 (56%), Positives = 249/342 (72%), Gaps = 5/342 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGS+M +G R + VVSTGS LDIALG GGLP+GRV+EI
Sbjct: 5 KKKALGAALMQIEKQFGKGSVMRMGDVAASRDIDVVSTGSLGLDIALGCGGLPRGRVIEI 64
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIAE Q+ GG F+DAEHALDPS AE IGV ++LL++QPD GEQ
Sbjct: 65 YGPESSGKTTLTLQVIAEMQKLGGTAAFVDAEHALDPSYAEKIGVNVDDLLVSQPDTGEQ 124
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RSG+VDVVV+DSVAAL PK E++G+MGD+HM +QARLMSQALRKL+ ++
Sbjct: 125 ALEITDMLVRSGAVDVVVIDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTGNIKR 184
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +KKGEE IG++
Sbjct: 185 SNTLVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKKGEEVIGNET 242
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPF+ A+FE+ +G+GIS E++DL + + F KAG+ ++Y D +GK
Sbjct: 243 RVKVVKNKVAPPFRQAEFEILYGEGISFLGELVDLGVSYGFIQKAGSWYSYGDEKIGQGK 302
Query: 303 EAFKQFLVENESVREELVIKLREKLVVDHKEP--QTAVTDED 342
+ K FL E+ +E+ K+R + P + V DED
Sbjct: 303 DNVKAFLREHPEKAKEIEAKIRAEAFGKKVAPLIEAPVVDED 344
>gi|325290320|ref|YP_004266501.1| recombinase A [Syntrophobotulus glycolicus DSM 8271]
gi|324965721|gb|ADY56500.1| RecA protein [Syntrophobotulus glycolicus DSM 8271]
Length = 348
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 186/342 (54%), Positives = 262/342 (76%), Gaps = 4/342 (1%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL AL QI FGKG++M LG + T + V+STG+ ALD+ALG GG+P+GRVVEIYGP
Sbjct: 9 ALDIALGQIEKQFGKGAVMRLGEASTKMAIEVISTGALALDVALGAGGVPRGRVVEIYGP 68
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTT+ALHVIAEAQ+ GG FIDAEHALDP A+ +GV T+ LL++QPD GEQAL
Sbjct: 69 ESSGKTTVALHVIAEAQKAGGVAAFIDAEHALDPEYAKALGVNTDELLISQPDTGEQALE 128
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ + L+RSG++DVVV+DSVAALVP+ E++GEMGD+H+ + ARLMSQALRKL+ ++S S+T
Sbjct: 129 ICEALVRSGAIDVVVIDSVAALVPRAEIEGEMGDSHVGLHARLMSQALRKLTGAISKSRT 188
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
++FINQ+R K+ FG P E T GG ALKFYASVRL +K+ ++K+G++ IG++ VK
Sbjct: 189 CVVFINQIREKVGIM-FGNP-ETTTGGRALKFYASVRLEVKKQDVIKQGQDVIGNRTRVK 246
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGKEAF 305
+VKNK+APPF A F++ +G+GISRE ++DL + +K+GA ++Y +R +G+E+
Sbjct: 247 VVKNKIAPPFNHADFDIIYGEGISREGSLVDLGAETTIVTKSGAWYSYQGERLGQGRESA 306
Query: 306 KQFLVENESVREELVIKLREKLVVDH-KEPQTAVTDEDSTEE 346
K++L ++ VR+E+ K+REKL+V+ K P ++ D +S+EE
Sbjct: 307 KEYLRDHPEVRQEIEAKIREKLLVNKGKSPASSEADPESSEE 348
>gi|195970165|ref|NP_385905.2| recombinase A [Sinorhizobium meliloti 1021]
gi|334316434|ref|YP_004549053.1| protein recA [Sinorhizobium meliloti AK83]
gi|384529619|ref|YP_005713707.1| protein recA [Sinorhizobium meliloti BL225C]
gi|384536050|ref|YP_005720135.1| recombinase A [Sinorhizobium meliloti SM11]
gi|407720741|ref|YP_006840403.1| recombinase A [Sinorhizobium meliloti Rm41]
gi|433613582|ref|YP_007190380.1| protein RecA [Sinorhizobium meliloti GR4]
gi|187904183|emb|CAC46378.2| DNA strand exchange and recombination protein [Sinorhizobium
meliloti 1021]
gi|333811795|gb|AEG04464.1| Protein recA [Sinorhizobium meliloti BL225C]
gi|334095428|gb|AEG53439.1| Protein recA [Sinorhizobium meliloti AK83]
gi|336032942|gb|AEH78874.1| recombinase A [Sinorhizobium meliloti SM11]
gi|407318973|emb|CCM67577.1| recombinase A [Sinorhizobium meliloti Rm41]
gi|429551772|gb|AGA06781.1| protein RecA [Sinorhizobium meliloti GR4]
Length = 361
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/331 (58%), Positives = 246/331 (74%), Gaps = 5/331 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI SFGKGSIM LG + + VSTGS LDIALG GGLPKGR++EI
Sbjct: 16 KSKALEAALSQIERSFGKGSIMKLGAKDSVVEIETVSTGSLGLDIALGIGGLPKGRIIEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL IAEAQ++GG C F+DAEHALDP A +GV ENLL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALQTIAEAQKKGGICGFVDAEHALDPVYARKLGVDLENLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++D++V+DSVAALVP+ E++GEMGD+ MQARLMSQALRKL+ S+S
Sbjct: 136 ALEITDTLVRSGAIDILVIDSVAALVPRAEIEGEMGDSLPGMQARLMSQALRKLTASISK 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+ EE +G+Q
Sbjct: 196 SNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSVKEREEVVGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E+IDL +K K+GA F+YN + +G+
Sbjct: 254 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELIDLGVKAGIVEKSGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK--LVVDH 331
E K FL EN + E+ LR+ L+ D
Sbjct: 314 ENAKLFLRENPELLREIETALRQNAGLIADR 344
>gi|260883955|ref|ZP_05895569.1| recombinase A [Brucella abortus bv. 9 str. C68]
gi|261222365|ref|ZP_05936646.1| recombinase A [Brucella ceti B1/94]
gi|265988866|ref|ZP_06101423.1| recombinase A [Brucella pinnipedialis M292/94/1]
gi|265991280|ref|ZP_06103837.1| recombinase A [Brucella melitensis bv. 1 str. Rev.1]
gi|265995117|ref|ZP_06107674.1| recombinase A [Brucella melitensis bv. 3 str. Ether]
gi|265998330|ref|ZP_06110887.1| recombinase A [Brucella ceti M490/95/1]
gi|294852537|ref|ZP_06793210.1| RecA protein [Brucella sp. NVSL 07-0026]
gi|376273069|ref|YP_005151647.1| recA protein [Brucella abortus A13334]
gi|376276188|ref|YP_005116627.1| recA protein [Brucella canis HSK A52141]
gi|384211568|ref|YP_005600650.1| recA protein [Brucella melitensis M5-90]
gi|384408675|ref|YP_005597296.1| RecA bacterial DNA recombination protein [Brucella melitensis M28]
gi|384445257|ref|YP_005603976.1| recA protein [Brucella melitensis NI]
gi|260873483|gb|EEX80552.1| recombinase A [Brucella abortus bv. 9 str. C68]
gi|260920949|gb|EEX87602.1| recombinase A [Brucella ceti B1/94]
gi|262552798|gb|EEZ08788.1| recombinase A [Brucella ceti M490/95/1]
gi|262766230|gb|EEZ12019.1| recombinase A [Brucella melitensis bv. 3 str. Ether]
gi|263002064|gb|EEZ14639.1| recombinase A [Brucella melitensis bv. 1 str. Rev.1]
gi|264661063|gb|EEZ31324.1| recombinase A [Brucella pinnipedialis M292/94/1]
gi|294821126|gb|EFG38125.1| RecA protein [Brucella sp. NVSL 07-0026]
gi|326409222|gb|ADZ66287.1| RecA bacterial DNA recombination protein [Brucella melitensis M28]
gi|326538931|gb|ADZ87146.1| recA protein [Brucella melitensis M5-90]
gi|349743248|gb|AEQ08791.1| recA protein [Brucella melitensis NI]
gi|363400675|gb|AEW17645.1| recA protein [Brucella abortus A13334]
gi|363404755|gb|AEW15050.1| recA protein [Brucella canis HSK A52141]
Length = 348
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 189/324 (58%), Positives = 244/324 (75%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI +FGKGSIM LG++ + VSTGS +LDIALG GGLPKGR+VEI
Sbjct: 3 KTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIVEI 62
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH IAEAQ++GG C F+DAEHALDP A +GV ENLL++QPD GEQ
Sbjct: 63 YGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQ 122
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 123 ALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSISR 182
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+ +E +G+Q
Sbjct: 183 SNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKERDEVVGNQT 240
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 241 RVKVVKNKLAPPFKQVEFDIMYGAGVSKVGELVDLGVKAGVVEKSGAWFSYNSQRLGQGR 300
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E KQ+L +N V E+ LR+
Sbjct: 301 ENAKQYLKDNPEVAREIETTLRQN 324
>gi|402851912|ref|ZP_10900035.1| RecA protein [Rhodovulum sp. PH10]
gi|402497811|gb|EJW09600.1| RecA protein [Rhodovulum sp. PH10]
Length = 365
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 190/331 (57%), Positives = 247/331 (74%), Gaps = 5/331 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI +FGKGSIM LG+ P + VSTGS LDIALG GGLP+GRVVEI
Sbjct: 16 KTKALDAALTQIERAFGKGSIMRLGKGSKPIEIEAVSTGSLGLDIALGIGGLPRGRVVEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
+GPE+SGKTTLALH +AEAQ++GG C F+DAEHALDP A +GV ++LL++QPD GEQ
Sbjct: 76 FGPESSGKTTLALHCVAEAQKKGGICAFVDAEHALDPVYARKLGVNLDDLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+V+DSVAALVP+ EL+GEMGDA MQARLMSQALRKL+ S+S
Sbjct: 136 ALEIADTLVRSGAVDVLVIDSVAALVPRAELEGEMGDAQPGMQARLMSQALRKLTGSISR 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T+++FINQ+R K+ +G P E T GGNALKFYASVRL+I+RIG +K+ +E +G+Q
Sbjct: 196 SNTMVVFINQIRMKIGVM-YGSP-ETTTGGNALKFYASVRLDIRRIGAIKERDEVVGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYND-RNFRGK 302
VK+VKNKLAPPFK +F++ +G+G+S+ EI+DL +K K+GA F+Y+ R +G+
Sbjct: 254 RVKVVKNKLAPPFKQVEFDIMYGEGVSKFGEILDLGVKAGLVEKSGAWFSYDSTRIGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK--LVVDH 331
E K FL N V ++ +R+ L+ D
Sbjct: 314 ENAKTFLRNNPDVTAKIEAAIRQNAGLIADQ 344
>gi|90818648|emb|CAJ32629.1| recombinase A [Ochrobactrum anthropi]
Length = 355
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 189/324 (58%), Positives = 243/324 (75%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI +FGKGSIM LG++ + VSTGS +LDIALG GGLPKGR+VEI
Sbjct: 16 KTKALDAALSQIERAFGKGSIMRLGQNDKVVEIETVSTGSLSLDIALGVGGLPKGRIVEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH IAEAQ++GG C F+DAEHALDP A +GV ENLL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 136 ALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISR 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+ +E +G+Q
Sbjct: 196 SNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKERDEVVGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 254 RVKVVKNKLAPPFKQVEFDIMYGAGVSKTGELVDLGVKAGVVEKSGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E K +L EN V E+ LR+
Sbjct: 314 ENAKLYLKENPEVAREIETTLRQN 337
>gi|430760747|ref|YP_007216604.1| RecA protein [Thioalkalivibrio nitratireducens DSM 14787]
gi|430010371|gb|AGA33123.1| RecA protein [Thioalkalivibrio nitratireducens DSM 14787]
Length = 347
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 187/330 (56%), Positives = 246/330 (74%), Gaps = 3/330 (0%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL AL QI FGKG++M +G R V V+STGS ALD+ALG GGLP+GRVVE+YGP
Sbjct: 12 ALAAALGQIERQFGKGAVMRMGDGTAVRDVEVISTGSLALDVALGIGGLPRGRVVEVYGP 71
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTTL L V+AE Q+ GG FIDAEHALDP A+ +GVK + LL++QPD GEQAL
Sbjct: 72 ESSGKTTLTLQVVAECQKLGGTAAFIDAEHALDPGYAQKLGVKVDELLISQPDTGEQALE 131
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ D L+RSG+VD+VVVDSVAAL PK E++GEMGDAH+ +QARLMSQALRKL+ ++ S T
Sbjct: 132 IADMLVRSGAVDLVVVDSVAALTPKAEIEGEMGDAHVGLQARLMSQALRKLTANIKRSNT 191
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
+++FINQ+R K+ FG P E T GGNALKFY+SVR++I+RIG +K+G+E +G++ VK
Sbjct: 192 LVVFINQIRMKIGVM-FGNP-ETTTGGNALKFYSSVRMDIRRIGAIKRGDEVVGNETRVK 249
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGKEAF 305
+VKNK+APPFK A FE+ +G+GISR E+I+L +K KAGA ++Y +R +GKE
Sbjct: 250 VVKNKMAPPFKEAFFEILYGEGISRLGEVIELGVKEGLVDKAGAWYSYKGERIGQGKENA 309
Query: 306 KQFLVENESVREELVIKLREKLVVDHKEPQ 335
+QFL E+ + E+ LRE+ + D Q
Sbjct: 310 RQFLKEHPEMANEIEQALRERYLPDRSHAQ 339
>gi|334353267|emb|CBZ39225.1| recombinase A [Brucella sp. F60]
gi|334353269|emb|CBZ39226.1| recombinase A [Brucella sp. F965]
Length = 328
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 189/322 (58%), Positives = 243/322 (75%), Gaps = 3/322 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI +FGKGSIM LG++ + VSTGS +LDIALG GGLPKGR+VEI
Sbjct: 6 KTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIVEI 65
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH IAEAQ++GG C F+DAEHALDP A +GV ENLL++QPD GEQ
Sbjct: 66 YGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQ 125
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 126 ALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSISR 185
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+ +E +G+Q
Sbjct: 186 SNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKERDEVVGNQT 243
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 244 RVKVVKNKLAPPFKQVEFDIMYGAGVSKVGELVDLGVKAGVVEKSGAWFSYNSQRLGQGR 303
Query: 303 EAFKQFLVENESVREELVIKLR 324
E KQ+L +N V E+ LR
Sbjct: 304 ENAKQYLKDNPEVAREIETTLR 325
>gi|298292139|ref|YP_003694078.1| recA protein [Starkeya novella DSM 506]
gi|296928650|gb|ADH89459.1| recA protein [Starkeya novella DSM 506]
Length = 360
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/343 (56%), Positives = 249/343 (72%), Gaps = 5/343 (1%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL AL QI FGKGSIM LG++ + VSTGS LDIALG GGLP+GR+VEI+GP
Sbjct: 19 ALDAALSQIERHFGKGSIMRLGKNDKIMEIETVSTGSLGLDIALGIGGLPRGRIVEIFGP 78
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTTLALH IAE+Q++GG C FIDAEHALDP A +GV +NLL++QPD GEQAL
Sbjct: 79 ESSGKTTLALHTIAESQKKGGVCAFIDAEHALDPIYARKLGVDLDNLLISQPDAGEQALE 138
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ DTL+RSG+VDV+VVDSVAAL P+ ELDGEMGD MQARLMSQALRKL+ S++ SQT
Sbjct: 139 IADTLVRSGAVDVLVVDSVAALTPRAELDGEMGDNQPGMQARLMSQALRKLTASINRSQT 198
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
++IFINQ+R K+ +G P E T GGNALKFY+SVRL+I+RIG +K+ +E +G+Q VK
Sbjct: 199 MVIFINQIRMKIGVM-YGSP-ETTTGGNALKFYSSVRLDIRRIGAIKERDEVVGNQTRVK 256
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGKEAF 305
+VKNKLAPPFK +F++ +G+G+S+ E+IDL +K K+GA F+Y+ + +G+E
Sbjct: 257 VVKNKLAPPFKQVEFDIMYGEGVSKMGELIDLGIKAGVVEKSGAWFSYDSQRLGQGRENA 316
Query: 306 KQFLVENESV--REELVIKLREKLVVDHKEPQTAVTDEDSTEE 346
K FL +N V R E I+ L+ + A D+D E
Sbjct: 317 KNFLRQNPDVAGRIEATIRQNAGLIAEQILAGEAGEDDDGDAE 359
>gi|240145640|ref|ZP_04744241.1| protein RecA [Roseburia intestinalis L1-82]
gi|257202261|gb|EEV00546.1| protein RecA [Roseburia intestinalis L1-82]
gi|291536384|emb|CBL09496.1| protein RecA [Roseburia intestinalis M50/1]
gi|291538746|emb|CBL11857.1| protein RecA [Roseburia intestinalis XB6B4]
Length = 387
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 185/325 (56%), Positives = 248/325 (76%), Gaps = 3/325 (0%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL A+ QI +GKGSIM LG + +V + TGS +LDIALG GGLPKGR++EIYGP
Sbjct: 20 ALDAAISQIEKQYGKGSIMKLGDNSAHMNVETIPTGSLSLDIALGLGGLPKGRIIEIYGP 79
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTT+ALH +AE Q++GG FIDAEHALDP A+ IGV +NL ++QPDCGEQAL
Sbjct: 80 ESSGKTTVALHAVAEVQKRGGIAGFIDAEHALDPVYAKNIGVDIDNLYISQPDCGEQALE 139
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ +T++RSG+VD+V+VDSVAALVPK E+DG+MGD+H+ +QARLMSQALRKL+ +S S
Sbjct: 140 ITETMVRSGAVDIVIVDSVAALVPKAEIDGDMGDSHVGLQARLMSQALRKLTSVISKSNC 199
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
++IFINQ+R K+ FG P E T GG ALKFY+SVR++++RI +K+G E +G++ VK
Sbjct: 200 VVIFINQLREKVGVM-FGNP-ETTTGGRALKFYSSVRMDVRRIEALKQGGEVVGNRTRVK 257
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGKEAF 305
IVKNK+APPF+ A+F++ FG+GISRE +I+DLA +K+GA + YN D+ +G+E
Sbjct: 258 IVKNKVAPPFREAEFDIMFGQGISREGDILDLAADKGVVNKSGAWYAYNGDKIGQGRENA 317
Query: 306 KQFLVENESVREELVIKLREKLVVD 330
KQ+L EN + EE+ K+RE L VD
Sbjct: 318 KQYLKENPLICEEIEAKVREMLNVD 342
>gi|86357938|ref|YP_469830.1| recombinase A [Rhizobium etli CFN 42]
gi|123751994|sp|Q2K7T3.1|RECA_RHIEC RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|86282040|gb|ABC91103.1| recombinase A protein [Rhizobium etli CFN 42]
gi|388603163|gb|AFK76186.1| recombinase A [Rhizobium etli]
Length = 362
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 190/331 (57%), Positives = 246/331 (74%), Gaps = 5/331 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI SFGKGSIM LG + + VSTGS LDIALG GGLPKGR++EI
Sbjct: 16 KSKALEAALSQIERSFGKGSIMKLGSNENVVEIETVSTGSLGLDIALGIGGLPKGRIIEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL IAE+Q++GG C F+DAEHALDP A +GV +NLL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALQTIAESQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+VVDSVAAL P+ E++GEMGD+ MQARLMSQALRKL+ S+S
Sbjct: 136 ALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGMQARLMSQALRKLTASISK 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+ EE +G+Q
Sbjct: 196 SNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSVKEREEVVGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 254 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK--LVVDH 331
E K FL +N + E+ + LR+ L+ D
Sbjct: 314 ENAKTFLRDNPDLAREIELALRQNAGLIADR 344
>gi|218675164|ref|ZP_03524833.1| recombinase A [Rhizobium etli GR56]
Length = 349
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 189/331 (57%), Positives = 247/331 (74%), Gaps = 5/331 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI SFGKGSIM LG + + +STGS LDIALG GGLPKGR++EI
Sbjct: 3 KSKALEAALSQIERSFGKGSIMKLGSNENVIEIETISTGSLGLDIALGVGGLPKGRIIEI 62
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL IAE+Q++GG C F+DAEHALDP A +GV +NLL++QPD GEQ
Sbjct: 63 YGPESSGKTTLALQTIAESQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 122
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 123 ALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 182
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+ EE +G+Q
Sbjct: 183 SNTMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSVKEREEVVGNQT 240
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 241 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQGR 300
Query: 303 EAFKQFLVENESVREELVIKLREK--LVVDH 331
E K FL +N + E+ + LR+ L+ D
Sbjct: 301 ENAKTFLRDNPDLAREIELALRQNAGLIADR 331
>gi|357406174|ref|YP_004918098.1| protein RecA (Recombinase A) [Methylomicrobium alcaliphilum 20Z]
gi|351718839|emb|CCE24513.1| Protein RecA (Recombinase A) [Methylomicrobium alcaliphilum 20Z]
Length = 346
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 188/322 (58%), Positives = 243/322 (75%), Gaps = 3/322 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGS+M +G R + VVSTGS +LDIALG GGLP+GRV+EI
Sbjct: 5 KKKALGAALMQIEKQFGKGSVMRMGDVAASRDIQVVSTGSLSLDIALGCGGLPRGRVIEI 64
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIA+ Q+ GG F+DAEHALDP AE IGV ++LL++QPD GEQ
Sbjct: 65 YGPESSGKTTLTLSVIAQMQKLGGTAAFVDAEHALDPGYAEKIGVNVDDLLVSQPDTGEQ 124
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RSG+VD+VVVDSVAAL PK E++G+MGD+HM +QARLMSQALRKL+ ++
Sbjct: 125 ALEITDMLVRSGAVDIVVVDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTANIKR 184
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VKKG+E IG++
Sbjct: 185 SNTLVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSVKKGDEVIGNET 242
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK A+FE+ +G+G+S E++DL + + F KAG+ ++YND +GK
Sbjct: 243 RVKVVKNKVAPPFKQAEFEILYGEGVSFYGELVDLGVSYGFIQKAGSWYSYNDEKIGQGK 302
Query: 303 EAFKQFLVENESVREELVIKLR 324
+ KQFL E+ ++ K+R
Sbjct: 303 DNVKQFLKEHPEKAADIEAKIR 324
>gi|339055914|ref|ZP_08648510.1| RecA protein [gamma proteobacterium IMCC2047]
gi|330720883|gb|EGG99071.1| RecA protein [gamma proteobacterium IMCC2047]
Length = 343
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 191/340 (56%), Positives = 248/340 (72%), Gaps = 8/340 (2%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGS+M +G P +VP +STGS LDIALG GGLPKGR++E
Sbjct: 4 NKQRALDMALSQIDKQFGKGSVMRMGDQERP-NVPAISTGSLGLDIALGIGGLPKGRIIE 62
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L IAEAQ+ GG FIDAEHALDP A+ IGV +NLL++QPD GE
Sbjct: 63 IYGPESSGKTTLTLQAIAEAQKAGGTAAFIDAEHALDPDYAQKIGVDVDNLLVSQPDTGE 122
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L+RSG+VD++V+DSVAAL PK E++G+MGD+HM +QARLMSQALRK++ ++
Sbjct: 123 QALEIADALVRSGAVDILVIDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKMTGNVK 182
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+G+E +G++
Sbjct: 183 RSNCMVIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAIKEGDEVVGNE 240
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+APPFK +F++ +GKGI R E+IDL +K KAGA ++Y D+ +G
Sbjct: 241 TRVKVVKNKMAPPFKQTEFQIMYGKGIFRMGELIDLGVKQGLVGKAGAWYSYQGDKIGQG 300
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDE 341
K QFL +N +V EE+ ++R L+ D T V DE
Sbjct: 301 KANAAQFLNDNPTVAEEIEGQIRAALLGDV----TPVKDE 336
>gi|132237|sp|P27865.1|RECA_RHIME RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|581521|emb|CAA42580.1| RecA protein [Sinorhizobium meliloti]
Length = 348
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/331 (58%), Positives = 246/331 (74%), Gaps = 5/331 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI SFGKGSIM LG + + VSTGS LDIALG GGLPKGR++EI
Sbjct: 3 KSKALEAALSQIERSFGKGSIMKLGAKDSVVEIETVSTGSLGLDIALGIGGLPKGRIIEI 62
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL IAEAQ++GG C F+DAEHALDP A +GV ENLL++QPD GEQ
Sbjct: 63 YGPESSGKTTLALQTIAEAQKKGGICGFVDAEHALDPVYARKLGVDLENLLISQPDTGEQ 122
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++D++V+DSVAALVP+ E++GEMGD+ MQARLMSQALRKL+ S+S
Sbjct: 123 ALEITDTLVRSGAIDILVIDSVAALVPRAEIEGEMGDSLPGMQARLMSQALRKLTASISK 182
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+ EE +G+Q
Sbjct: 183 SNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSVKEREEVVGNQT 240
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E+IDL +K K+GA F+YN + +G+
Sbjct: 241 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELIDLGVKAGIVEKSGAWFSYNSQRLGQGR 300
Query: 303 EAFKQFLVENESVREELVIKLREK--LVVDH 331
E K FL EN + E+ LR+ L+ D
Sbjct: 301 ENAKLFLRENPELLREIETALRQNAGLIADR 331
>gi|157826209|ref|YP_001493929.1| recombinase A [Rickettsia akari str. Hartford]
gi|157800167|gb|ABV75421.1| recombinase A [Rickettsia akari str. Hartford]
Length = 362
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 189/327 (57%), Positives = 249/327 (76%), Gaps = 6/327 (1%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPR-HVPVVSTGSFALDIALGTGGLPKGRV 60
+ K+ A+ AL QI S+GKGS+M LG+ P + VSTGS LDIALG GG+PKGR+
Sbjct: 23 TDKERAIAAALVQIEKSYGKGSVMKLGQR--PNVDIEAVSTGSLGLDIALGIGGVPKGRI 80
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+EI+GPE+SGKTTL LH+IAEAQ++GG C FIDAEHALDP+ A+ +GV + L+++QPD
Sbjct: 81 IEIFGPESSGKTTLTLHLIAEAQKKGGTCAFIDAEHALDPAYAKKLGVNIDELIISQPDT 140
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + DTLIRSG +D++++DSVAALVPK E++GEMGDA MA QARLMSQALRKL+ S
Sbjct: 141 GEQALEITDTLIRSGGIDMIIIDSVAALVPKSEIEGEMGDAQMASQARLMSQALRKLTAS 200
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
++ + I +FINQ+R K+ FG P E T GGNALKFYASVR++I+RIG +K EE IG
Sbjct: 201 INRTNCITVFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRIDIRRIGSIKDKEEVIG 258
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYND-RNF 299
SQ VK+VKNK++PPFKTA F++ +G GIS+E EIIDL +K K+G+ F+YN+ R
Sbjct: 259 SQTRVKVVKNKVSPPFKTADFDIMYGSGISKEGEIIDLGVKLDIVEKSGSWFSYNNVRIG 318
Query: 300 RGKEAFKQFLVENESVREELVIKLREK 326
+G+E KQ+L E+ + E+ +REK
Sbjct: 319 QGRENVKQYLKEHPQISNEIEKIIREK 345
>gi|343131436|gb|AEL89245.1| recombinase A, partial [Ochrobactrum pecoris]
gi|343131438|gb|AEL89246.1| recombinase A, partial [Ochrobactrum pecoris]
Length = 355
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 187/324 (57%), Positives = 243/324 (75%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI +FGKGSIM LG++ + VSTGS +LDIALG GGLPKGR+VEI
Sbjct: 16 KTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIVEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH IAEAQ++GG C F+DAEHALDP A +GV ENLL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+V+DSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 136 ALEITDTLVRSGAIDVLVIDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISR 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+ +E +G+Q
Sbjct: 196 SNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKERDEVVGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 254 RVKVVKNKLAPPFKQVEFDIMYGAGVSKTGELVDLGVKAGVVEKSGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E KQ+L +N E+ LR+
Sbjct: 314 ENAKQYLRDNPETAREIETTLRQN 337
>gi|343131434|gb|AEL89244.1| recombinase A, partial [Ochrobactrum pecoris]
Length = 355
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 187/324 (57%), Positives = 243/324 (75%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI +FGKGSIM LG++ + VSTGS +LDIALG GGLPKGR+VEI
Sbjct: 16 KTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIVEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH IAEAQ++GG C F+DAEHALDP A +GV ENLL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+V+DSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 136 ALEITDTLVRSGAIDVLVIDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISR 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+ +E +G+Q
Sbjct: 196 SNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKERDEVVGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 254 RVKVVKNKLAPPFKQVEFDIMYGAGVSKTGELVDLGVKAGVVEKSGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E KQ+L +N E+ LR+
Sbjct: 314 ENAKQYLRDNPETAREIETTLRQN 337
>gi|389775396|ref|ZP_10193362.1| recombinase A [Rhodanobacter spathiphylli B39]
gi|388437437|gb|EIL94238.1| recombinase A [Rhodanobacter spathiphylli B39]
Length = 345
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 191/333 (57%), Positives = 246/333 (73%), Gaps = 4/333 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKG++M +G V + +STGS LDIALG GGLP+GRVVE
Sbjct: 4 NKRKALTSALGQIEKQFGKGAVMRMGDRVN-EAIETISTGSLGLDIALGVGGLPRGRVVE 62
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTT+ L IA QR GG FIDAEHALDP+ AE +GVK ++LL++QPD GE
Sbjct: 63 IYGPESSGKTTMTLQAIASCQRAGGTAAFIDAEHALDPTYAEKLGVKVDDLLVSQPDTGE 122
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L+RSG+VD+VVVDSVAAL PK E++GEMGD+H+ + ARLMSQALRKL+ ++
Sbjct: 123 QALEIADMLVRSGAVDMVVVDSVAALTPKAEIEGEMGDSHVGLHARLMSQALRKLTANIK 182
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VKKG+E IGS+
Sbjct: 183 KSGCLVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAVKKGDEIIGSE 240
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+APPF+ +FE+ +G+G SRE EII+L + K+GA ++YN DR +G
Sbjct: 241 TRVKVVKNKVAPPFRQTEFEILYGEGTSREGEIIELGVAQNLIDKSGAWYSYNGDRIGQG 300
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEP 334
KE +QFL +N ++ E+ +LRE+L+V P
Sbjct: 301 KENVRQFLRDNPAIANEIDKQLRERLLVPVGRP 333
>gi|384261788|ref|YP_005416974.1| protein recA [Rhodospirillum photometricum DSM 122]
gi|378402888|emb|CCG08004.1| Protein recA [Rhodospirillum photometricum DSM 122]
Length = 372
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/346 (56%), Positives = 254/346 (73%), Gaps = 6/346 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ A+ QI SFGKGSIM LG+ +STGS LDIALG GGLP+GR+VEI
Sbjct: 30 KQKALEAAVGQIERSFGKGSIMRLGQRERVVETESISTGSLGLDIALGVGGLPRGRIVEI 89
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLA+HVIAEAQ++GG C F+DAEHA DP +G+ + LL++QPD GEQ
Sbjct: 90 YGPESSGKTTLAMHVIAEAQKKGGSCAFVDAEHAFDPLYGRKLGLNLDELLISQPDTGEQ 149
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+VVDSVAALVPK EL+G+MGD+H+ +QARLMSQALRKL+ ++S
Sbjct: 150 ALEIADTLVRSGAIDVLVVDSVAALVPKAELEGDMGDSHVGLQARLMSQALRKLTGTVSR 209
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK E+ +G+Q
Sbjct: 210 SNTLIIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKDKEDIVGNQT 267
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYND-RNFRGK 302
VK+VKNK+APPFK +F++ +G+G+S+ EI+DL +K K+GA F+YN R +G+
Sbjct: 268 RVKVVKNKVAPPFKVVEFDIMYGEGVSKMGEILDLGVKANLIEKSGAWFSYNSTRIGQGR 327
Query: 303 EAFKQFLVENESVREEL--VIKLREKLVVDHKEPQTAVTDEDSTEE 346
E KQFL +N + EE+ I+ L+ D K + TD+ EE
Sbjct: 328 ENAKQFLRDNPVMAEEIENAIRANAGLIAD-KMIGSPGTDDAPAEE 372
>gi|281210244|gb|EFA84411.1| recombinase A [Polysphondylium pallidum PN500]
Length = 453
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/361 (53%), Positives = 262/361 (72%), Gaps = 6/361 (1%)
Query: 8 LQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPE 67
L+ + +I +FGKG++M LG S + V V+S+GS LD+ALG GGLPKGR++EI+GPE
Sbjct: 95 LESTMAEIEKTFGKGTLMKLGTSFATQKVDVISSGSLGLDVALGIGGLPKGRIIEIFGPE 154
Query: 68 ASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSL 127
+SGKTTLALHVIA+AQ+ GG C FIDAEHAL+PS A+ +GV + L ++QPD GEQAL +
Sbjct: 155 SSGKTTLALHVIAQAQKAGGNCTFIDAEHALNPSWAQKLGVNLDELFISQPDSGEQALEI 214
Query: 128 VDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTI 187
VD+L+RS ++ V+VVDSVAALVP+ EL+GEMGD+H+ +QARLMSQALRKLS +L S I
Sbjct: 215 VDSLLRSKTMQVIVVDSVAALVPRVELEGEMGDSHVGVQARLMSQALRKLSPNLKESNCI 274
Query: 188 LIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVKI 247
LIFINQ+R K+ FG P E T GGNALKF++S+RL+I++IG VKKGEE I SQ+ VK+
Sbjct: 275 LIFINQIRMKIGVM-FGNP-ETTTGGNALKFFSSIRLDIRKIGAVKKGEEAIASQVRVKV 332
Query: 248 VKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGKEAFK 306
KNKLAPPF+ A F+++F GI++ EIID+A+ K G+ ++YN + +G+E K
Sbjct: 333 AKNKLAPPFREAVFDIDFVSGINKTGEIIDMAVTEGIIEKGGSWYSYNQQQLAQGREKTK 392
Query: 307 QFLVENESVREELVIKLREKLVVDHKEPQTAVTD--EDSTEETVSTISPDSTDEEAAAVV 364
Q+L +N+ + E+ KLR++L V P + + D ED +E + DS + VV
Sbjct: 393 QYLEDNQELLNEIESKLRQRL-VKSVVPTSKLNDNNEDYKDEYDHDVDGDSDNTSTKKVV 451
Query: 365 E 365
E
Sbjct: 452 E 452
>gi|150396733|ref|YP_001327200.1| recombinase A [Sinorhizobium medicae WSM419]
gi|166220683|sp|A6U9N5.1|RECA_SINMW RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|150028248|gb|ABR60365.1| recA protein [Sinorhizobium medicae WSM419]
Length = 361
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/331 (58%), Positives = 246/331 (74%), Gaps = 5/331 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI +FGKGSIM LG + + VSTGS LDIALG GGLPKGR+VEI
Sbjct: 16 KSKALEAALSQIERAFGKGSIMKLGAKDSVVEIETVSTGSLGLDIALGIGGLPKGRIVEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL IAEAQ++GG C F+DAEHALDP A +GV ENLL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALQTIAEAQKKGGICGFVDAEHALDPIYARKLGVDLENLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+VVDSVAALVP+ E++GEMGD+ MQARLMSQALRKL+ S+S
Sbjct: 136 ALEITDTLVRSGAIDVLVVDSVAALVPRAEIEGEMGDSLPGMQARLMSQALRKLTASISK 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+ EE +G+Q
Sbjct: 196 SNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSVKEREEVVGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E+IDL +K K+GA F+YN + +G+
Sbjct: 254 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELIDLGVKAGIVEKSGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK--LVVDH 331
E K FL +N + E+ LR+ L+ D
Sbjct: 314 ENAKLFLRDNPELLREIETALRQNAGLIADR 344
>gi|300122439|emb|CBK23010.2| Recombinase A protein (RecA) [Blastocystis hominis]
Length = 398
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/344 (56%), Positives = 251/344 (72%), Gaps = 6/344 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K+LAL+ A+ Q+ + FGKGS+M LG S + VPV+STGS +D ALG GGLP+GR+VEI
Sbjct: 46 KELALKNAIKQLETQFGKGSVMKLG-SKSHLDVPVISTGSLTVDHALGIGGLPRGRIVEI 104
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH +AE Q+ GG C FIDAEHALDP A IGV +L ++QPD GEQ
Sbjct: 105 YGPESSGKTTLALHTVAELQKTGGTCTFIDAEHALDPLYASKIGVNINDLYISQPDSGEQ 164
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RSG++D++VVDSVAALVPK E +G MGDAHMA+QARLMSQALRK++ SLS
Sbjct: 165 ALEIADCLVRSGAMDMIVVDSVAALVPKAEAEGNMGDAHMALQARLMSQALRKITGSLSR 224
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S +LIFINQ+R K+ FG P EVT GGNALKFY+SVRL+I+R +K+G+E IG +
Sbjct: 225 SNCLLIFINQIRQKVGIL-FGNP-EVTPGGNALKFYSSVRLDIRRKTAIKEGDEVIGYET 282
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPF+TA F++ FG GIS+ EI+DLA++ K GA +Y NF +G+
Sbjct: 283 VVKVVKNKLAPPFRTASFDMMFGTGISKTGEILDLAIEDGIIQKKGAWLSYQGENFAQGR 342
Query: 303 EAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEE 346
K++L+ NE + L +LREK +E Q + S EE
Sbjct: 343 AKAKEYLMANEELCRSLEEQLREKW--KEQENQQGQSGGSSMEE 384
>gi|295810384|emb|CBL81076.1| recombinase A [Agrobacterium larrymoorei]
Length = 316
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 188/317 (59%), Positives = 243/317 (76%), Gaps = 3/317 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI SFGKGSIM LG + V VSTGS +LDIALG GGLPKGR++EI
Sbjct: 1 KSKALEAALSQIERSFGKGSIMKLGSNENVIEVETVSTGSLSLDIALGIGGLPKGRIIEI 60
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL IAEAQ++GG C F+DAEHALDP A +GV +NLL++QPD GEQ
Sbjct: 61 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 120
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 121 ALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 180
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+ EE +G+Q
Sbjct: 181 SKTMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSVKEREEVVGNQT 238
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 239 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQGR 298
Query: 303 EAFKQFLVENESVREEL 319
E K F+ +N +V E+
Sbjct: 299 ENAKGFVRDNPAVANEI 315
>gi|443673340|ref|ZP_21138408.1| Protein RecA [Rhodococcus sp. AW25M09]
gi|443414155|emb|CCQ16746.1| Protein RecA [Rhodococcus sp. AW25M09]
Length = 345
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/342 (56%), Positives = 257/342 (75%), Gaps = 8/342 (2%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
+D AL AL QI +FGKGS+M LG V + + V+ TGS ALD+ALG GGLP+GRV+E+
Sbjct: 6 RDKALDLALAQIDKNFGKGSVMRLGDEVR-QPIAVIPTGSIALDVALGIGGLPRGRVIEV 64
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ALH +A AQR GG FIDAEHALDP A+ +GV T+ LL++QPD GEQ
Sbjct: 65 YGPESSGKTTVALHAVASAQRAGGIAAFIDAEHALDPDYAKKLGVDTDALLVSQPDTGEQ 124
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D LIRSG++D++V+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ ++S
Sbjct: 125 ALEIADMLIRSGALDILVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITGAMSN 184
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T +IFINQ+R K+ FG P E T GG ALKFYASVRL+I+RI +K G + IG++
Sbjct: 185 SGTTVIFINQLREKIGVM-FGSP-ETTTGGKALKFYASVRLDIRRIETLKDGTDAIGNRT 242
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRGK 302
VK+VKNK+APPFK A+F++ +GKGISRE +ID+ ++H F K+G+ FTY D+ +GK
Sbjct: 243 RVKVVKNKVAPPFKQAEFDIIYGKGISREGSLIDMGVEHGFIRKSGSWFTYEGDQLGQGK 302
Query: 303 EAFKQFLVENESVREELVIKLREKLV----VDHKEPQTAVTD 340
E ++F++EN VR+E+ K+ EKL V +EP A D
Sbjct: 303 ENARKFMLENPDVRDEIEKKIMEKLQIGADVTAEEPAAAPVD 344
>gi|226939722|ref|YP_002794795.1| recombinase A [Laribacter hongkongensis HLHK9]
gi|254790435|sp|C1D4J2.1|RECA_LARHH RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|226714648|gb|ACO73786.1| RecA [Laribacter hongkongensis HLHK9]
Length = 354
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 184/324 (56%), Positives = 249/324 (76%), Gaps = 3/324 (0%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVV 61
+ K AL AL QI FGKGSIM + + ++ V+STGS LD+ALG GGLP+GRVV
Sbjct: 4 TDKQKALSAALSQIEKQFGKGSIMRMNETQVNDNLQVISTGSLGLDMALGVGGLPRGRVV 63
Query: 62 EIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCG 121
EIYGPE+SGKTTL L V+AEAQ+ GG C +IDAE+ALDP A +GVK ++LL++QPD G
Sbjct: 64 EIYGPESSGKTTLCLQVVAEAQKLGGTCAYIDAENALDPVYAGKLGVKVDDLLVSQPDTG 123
Query: 122 EQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSL 181
EQAL + D L+RSG VDV+VVDSVAALVPK E++GEMGD+H+ +QARLMSQALRKL+ ++
Sbjct: 124 EQALEICDMLVRSGGVDVIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTGNI 183
Query: 182 SLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGS 241
+ T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +KK +E IG+
Sbjct: 184 KRTNTLVIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAIKKTDEIIGN 241
Query: 242 QIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-R 300
+ VK+VKNK++PPFK A+F++ +G+GISRE EII++ + +KF K+GA + YN + +
Sbjct: 242 ETRVKVVKNKVSPPFKQAEFDILYGEGISREGEIIEMGVANKFVDKSGAWYAYNGQKIGQ 301
Query: 301 GKEAFKQFLVENESVREELVIKLR 324
GK+ +++L EN ++ +E+ K+R
Sbjct: 302 GKDNAREWLRENPAIAQEIEKKIR 325
>gi|424910654|ref|ZP_18334031.1| protein RecA [Rhizobium leguminosarum bv. viciae USDA 2370]
gi|392846685|gb|EJA99207.1| protein RecA [Rhizobium leguminosarum bv. viciae USDA 2370]
Length = 362
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 190/331 (57%), Positives = 247/331 (74%), Gaps = 5/331 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI SFGKGSIM LG + V VSTGS +LDIALG GGLPKGR++EI
Sbjct: 16 KSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGRIIEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL IAEAQ++GG C F+DAEHALDP A +GV ++LL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQSLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 136 ALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+ ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+ EE +G+Q
Sbjct: 196 SKCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAVKEREEVVGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 254 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK--LVVDH 331
E K FL +N E+ + LR+ L+ D
Sbjct: 314 ENAKTFLRDNPDTANEIELALRQNAGLIADR 344
>gi|296132793|ref|YP_003640040.1| recA protein [Thermincola potens JR]
gi|296031371|gb|ADG82139.1| recA protein [Thermincola potens JR]
Length = 343
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/342 (56%), Positives = 254/342 (74%), Gaps = 6/342 (1%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
MS K AL AL QI FGKGSIM LG + ++ V+ TG+ ALD+ALG GG+P+GRV
Sbjct: 1 MSDKLKALDMALSQIEKQFGKGSIMKLGEASAKMNIEVIPTGALALDVALGVGGVPRGRV 60
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
VEIYGPE+SGKTT+ALH+IAEAQ+ GG FIDAEHALDP A +GV +NLL++QPD
Sbjct: 61 VEIYGPESSGKTTVALHIIAEAQKLGGTAAFIDAEHALDPYYARKLGVDIDNLLVSQPDT 120
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + + L+RSG++DV+VVDSVAALVP+ E++GEMGDAH+ +QARLMSQALRKL+ +
Sbjct: 121 GEQALEIAEALVRSGAIDVIVVDSVAALVPRAEIEGEMGDAHVGLQARLMSQALRKLTGA 180
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
+S S+T IFINQ+R K+ FG P E T GG ALKFYASVR+ +++I +K+G + IG
Sbjct: 181 ISKSRTTAIFINQIREKVGVM-FGNP-ETTPGGRALKFYASVRMEVRKIESLKQGADVIG 238
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF- 299
S+ VK+VKNK+APPFK A F++ +G+GISRE IID+A +K+GA ++Y D
Sbjct: 239 SRTRVKVVKNKVAPPFKQADFDITYGEGISREGSIIDMATDLNILNKSGAWYSYKDERLG 298
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDE 341
+G+E K++L E+ + E+ K+RE L + HK P+ VTDE
Sbjct: 299 QGRENVKEYLKEHPEIANEIEEKIRESLGL-HKNPE--VTDE 337
>gi|345862875|ref|ZP_08815089.1| protein RecA [endosymbiont of Tevnia jerichonana (vent Tica)]
gi|345876718|ref|ZP_08828482.1| putative RecA protein [endosymbiont of Riftia pachyptila (vent
Ph05)]
gi|344226217|gb|EGV52556.1| putative RecA protein [endosymbiont of Riftia pachyptila (vent
Ph05)]
gi|345126217|gb|EGW56083.1| protein RecA [endosymbiont of Tevnia jerichonana (vent Tica)]
Length = 342
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/323 (59%), Positives = 247/323 (76%), Gaps = 3/323 (0%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL AL QI FGKGS+M +G S + R++ +STGS LDIALG GGLPKGRVVEIYGP
Sbjct: 8 ALSAALGQIEKQFGKGSVMRMGDSGSIRNIEAISTGSLGLDIALGVGGLPKGRVVEIYGP 67
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTTL L V+AEAQ+QGG C FIDAEHALDP AE IGV + LL++QPD GEQAL
Sbjct: 68 ESSGKTTLTLQVVAEAQKQGGTCAFIDAEHALDPIYAEKIGVNVDELLVSQPDTGEQALE 127
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ D L+RSG+VDVVV+DSVAAL PK E++GEMGD H+ +QARLMSQALRKL+ ++ +
Sbjct: 128 ITDMLVRSGAVDVVVIDSVAALTPKAEIEGEMGDTHVGLQARLMSQALRKLTANIKRTNC 187
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +KKGEE +G+ VK
Sbjct: 188 LVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAIKKGEEVVGNDTKVK 245
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGKEAF 305
+VKNK+APPFK FE+ +G+GISRE EII+L +K KAGA ++YN DR +G+E
Sbjct: 246 VVKNKVAPPFKLTTFEIIYGEGISREGEIIELGVKQGIVDKAGAWYSYNGDRIGQGRENV 305
Query: 306 KQFLVENESVREELVIKLREKLV 328
+QFL +N + ++ +++R +L+
Sbjct: 306 RQFLKDNPDIAADIELRVRAELL 328
>gi|418054896|ref|ZP_12692951.1| Protein recA [Hyphomicrobium denitrificans 1NES1]
gi|353210478|gb|EHB75879.1| Protein recA [Hyphomicrobium denitrificans 1NES1]
Length = 377
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/364 (53%), Positives = 262/364 (71%), Gaps = 7/364 (1%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
M KK AL+ AL QI +FGKGSIM LG + + + TGS LDIALG GGLPKGR+
Sbjct: 14 MDKKQ-ALEHALQQIDKNFGKGSIMRLGAN-EKVDIEAIPTGSLGLDIALGIGGLPKGRI 71
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+EIYGPE+SGKTTLALHV+AEAQ++GG C F+DAEHA+DP A+ +GVK E+LL++QPD
Sbjct: 72 IEIYGPESSGKTTLALHVVAEAQKRGGICAFVDAEHAIDPGYAKKLGVKVEDLLISQPDT 131
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + DTL+RSG++DV+VVDSVAAL PK EL+GEMGD+ +QARLMSQALRKL+ S
Sbjct: 132 GEQALEIADTLVRSGAIDVLVVDSVAALTPKAELEGEMGDSLPGLQARLMSQALRKLTGS 191
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
+S S+ ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+ EET+G
Sbjct: 192 ISKSKCMVIFINQIRMKIGIM-FGNP-ETTTGGNALKFYASVRLDIRRIGQIKEREETVG 249
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNF 299
+Q VK+VKNK+APPFK +F++ +G+G+S+ E+ID+ +K K+GA +YN DR
Sbjct: 250 NQTRVKVVKNKVAPPFKQVEFDIMYGEGVSKVGELIDIGVKAGIVEKSGAWLSYNGDRIG 309
Query: 300 RGKEAFKQFLVENESVREEL--VIKLREKLVVDHKEPQTAVTDEDSTEETVSTISPDSTD 357
+G+E K +L EN + E+ I+ L+V+ ++D + + PD
Sbjct: 310 QGRENAKTYLKENPRIANEIENAIRASAGLIVEKMLANPDAGEDDGEQPDEDGVLPDEDT 369
Query: 358 EEAA 361
++ A
Sbjct: 370 KKVA 373
>gi|377555585|ref|ZP_09785313.1| recombinase A [endosymbiont of Bathymodiolus sp.]
Length = 341
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 190/344 (55%), Positives = 256/344 (74%), Gaps = 7/344 (2%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
+K AL+ AL QI FGKGS+M+LG + + VSTGS +LDIALG GGLP+GRV+E
Sbjct: 4 QKKQALKVALTQIDKQFGKGSVMFLGDAGANTDIEAVSTGSLSLDIALGIGGLPRGRVIE 63
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL LHVIAE Q+ GG FIDAEHALDP A+ +GV T+ LL++QPD GE
Sbjct: 64 IYGPESSGKTTLTLHVIAEMQKLGGTAAFIDAEHALDPQYAKRLGVNTDELLISQPDTGE 123
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L+RSG VD+VVVDSVAAL PK E++GEMG +HM +QARLMSQALRKL+ ++
Sbjct: 124 QALEITDMLVRSGGVDIVVVDSVAALTPKAEIEGEMGASHMGLQARLMSQALRKLTSNIK 183
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +KKG+E +G++
Sbjct: 184 KTNTMVIFINQLRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAIKKGDEILGNE 241
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRG 301
VK++KNK+APPFK A+F++ + +GISRESEIIDL +KH KAGA ++ ++R +G
Sbjct: 242 TRVKVLKNKVAPPFKQAEFQILYNEGISRESEIIDLGVKHGLVDKAGAWYSVGSERIGQG 301
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTE 345
K+ + +L E+ + +L K+++K++ P+ V + T+
Sbjct: 302 KDNARDYLKEHPKMSTDLEEKIKQKILT----PEEGVNQDAGTK 341
>gi|361049809|emb|CCE21614.1| recombinase A, partial [Brucella sp. 4986/3]
Length = 348
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 188/324 (58%), Positives = 244/324 (75%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI +FGKGSIM LG++ + VSTGS +LDIALG GGLPKGR+VEI
Sbjct: 3 KTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIVEI 62
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH IAEAQ++GG C F+DAEHALDP A +GV ENLL++QPD GEQ
Sbjct: 63 YGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQ 122
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALR+L+ S+S
Sbjct: 123 ALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRELTGSISR 182
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+ +E +G+Q
Sbjct: 183 SNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKERDEVVGNQT 240
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 241 RVKVVKNKLAPPFKQVEFDIMYGAGVSKVGELVDLGVKAGVVEKSGAWFSYNSQRLGQGR 300
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E KQ+L +N V E+ LR+
Sbjct: 301 ENAKQYLKDNPEVAREIETTLRQN 324
>gi|337757325|emb|CCA61584.1| recombinase A [Agrobacterium vitis]
Length = 319
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 188/317 (59%), Positives = 241/317 (76%), Gaps = 3/317 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI SFGKGSIM LG + V VSTGS +LDIALG GGLPKGR++EI
Sbjct: 1 KSKALEAALSQIERSFGKGSIMKLGANEKIVEVETVSTGSLSLDIALGIGGLPKGRIIEI 60
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL IAEAQ++GG C F+DAEHALDP A +GV +NLL++QPD GEQ
Sbjct: 61 YGPESSGKTTLALQTIAEAQKKGGVCAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 120
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+V+DSVAAL PK E++GEMGD+ MQARLMSQALRKL+ S+S
Sbjct: 121 ALEITDTLVRSGAIDVLVIDSVAALTPKAEIEGEMGDSLPGMQARLMSQALRKLTGSISR 180
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S +++FINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK EE +G+Q
Sbjct: 181 SNCMVVFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAVKDREEIVGNQT 238
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E++DL +K KAGA F+YN + +G+
Sbjct: 239 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKAGAWFSYNSQRLGQGR 298
Query: 303 EAFKQFLVENESVREEL 319
E K FL +N +V +E+
Sbjct: 299 ENAKIFLRDNPAVADEI 315
>gi|291618587|ref|YP_003521329.1| RecA [Pantoea ananatis LMG 20103]
gi|291153617|gb|ADD78201.1| RecA [Pantoea ananatis LMG 20103]
Length = 356
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 197/353 (55%), Positives = 250/353 (70%), Gaps = 4/353 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPEASGKTTL L VIA AQR+G C FIDAEHALDP A+ +GV +NLL +QPD GE
Sbjct: 65 IYGPEASGKTTLTLQVIAAAQRKGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV++VDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALARSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+G+ +GS+
Sbjct: 185 QSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAIKEGDNVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +KHK KAGA ++Y D+ +G
Sbjct: 243 TRVKVVKNKIAAPFKQAEFQIMYGEGINTFGELVDLGVKHKLIEKAGAWYSYKGDKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETVSTISPD 354
K FL EN +V EEL IKLRE L+ + A + E+ S + D
Sbjct: 303 KANAGNFLKENAAVAEELDIKLREMLLNGGDQNIAADVAGNDVEKAASEANED 355
>gi|374261319|ref|ZP_09619903.1| RecA protein [Legionella drancourtii LLAP12]
gi|363538214|gb|EHL31624.1| RecA protein [Legionella drancourtii LLAP12]
Length = 348
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 186/340 (54%), Positives = 248/340 (72%), Gaps = 3/340 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGS+M +G S R + +STGS LDIALG GGLPKGR+VEI
Sbjct: 5 KQKALSAALSQIERQFGKGSVMLMGDSSVSRDIEAISTGSLGLDIALGIGGLPKGRIVEI 64
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIAE Q+ GG FIDAEHALDPS A+ +GV + LL++QPD GEQ
Sbjct: 65 YGPESSGKTTLTLQVIAECQKMGGTAAFIDAEHALDPSYAQKLGVNVDELLVSQPDTGEQ 124
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RS +VDV+++DSVAAL PK E++G+MGD+H+ +QARLMSQALRKL+ ++
Sbjct: 125 ALEITDMLVRSAAVDVIIIDSVAALTPKAEIEGDMGDSHVGLQARLMSQALRKLTANIKR 184
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +KKGEE +GS+
Sbjct: 185 SNTLVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKKGEEILGSET 242
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ + +GISRESEII+LA++ K+GA ++Y +GK
Sbjct: 243 RVKVVKNKVAPPFKMTEFDILYNEGISRESEIINLAVQLNLIEKSGAWYSYKQEKIGQGK 302
Query: 303 EAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDED 342
+ + +L +N + L ++R +L+ + AV+D +
Sbjct: 303 DNVRLYLKDNPQIAASLEQQIRSELLEKKQAMPAAVSDNE 342
>gi|389876987|ref|YP_006370552.1| recombinase A [Tistrella mobilis KA081020-065]
gi|388527771|gb|AFK52968.1| RecA protein [Tistrella mobilis KA081020-065]
Length = 366
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 186/323 (57%), Positives = 246/323 (76%), Gaps = 4/323 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI +FGKGS+M LG+ V VV TGS ALDIALG GG P+GRV+EI
Sbjct: 21 KQKALEAALGQIERAFGKGSVMKLGQQ-EKVDVDVVPTGSLALDIALGVGGFPRGRVIEI 79
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH IAEAQR GG C F+DAEHALDPS A +GV + L+++QPD GEQ
Sbjct: 80 YGPESSGKTTLALHAIAEAQRGGGTCAFVDAEHALDPSYARKLGVNIDELVISQPDTGEQ 139
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+VVDSVAAL PK EL+GEMGD+H+ +QARLMSQALRKL+ S+S
Sbjct: 140 ALEIADTLVRSGAIDVLVVDSVAALTPKAELEGEMGDSHVGLQARLMSQALRKLTGSISR 199
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+ ++IFINQ+R K+ +G P E T GGNALKFYASVRL+I+RIG VK+ +E +GSQ
Sbjct: 200 SRCVVIFINQIRMKIGVM-YGSP-ETTAGGNALKFYASVRLDIRRIGAVKERDEVVGSQT 257
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPF+ +F++ +G+G+S+ E+ID+ +K K+G+ ++Y D+ +G+
Sbjct: 258 RVKVVKNKVAPPFRQVEFDIMYGEGVSKTGELIDMGVKQGIVEKSGSWYSYGDQRIGQGR 317
Query: 303 EAFKQFLVENESVREELVIKLRE 325
E K FL +N + E+ ++RE
Sbjct: 318 ENAKTFLRDNPEIAREVENRVRE 340
>gi|399042548|ref|ZP_10737258.1| protein RecA [Rhizobium sp. CF122]
gi|398058991|gb|EJL50859.1| protein RecA [Rhizobium sp. CF122]
Length = 362
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 191/331 (57%), Positives = 245/331 (74%), Gaps = 5/331 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI SFGKGSIM LG + + VSTGS LDIALG GGLPKGR++EI
Sbjct: 16 KSKALEAALSQIERSFGKGSIMKLGSNENVVEIETVSTGSLGLDIALGIGGLPKGRIIEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL IAE+Q++GG C F+DAEHALDP A +GV +NLL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALQTIAESQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+VVDSVAAL P+ E++GEMGD +QARLMSQALRKL+ S+S
Sbjct: 136 ALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDNLPGLQARLMSQALRKLTASISK 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+ EE IG+Q
Sbjct: 196 SNTMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAVKEREEIIGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 254 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK--LVVDH 331
E K FL +N + E+ LR+ L+ D
Sbjct: 314 ENAKLFLRDNPDLLREIETALRQNAGLIADR 344
>gi|163759602|ref|ZP_02166687.1| recombinase A [Hoeflea phototrophica DFL-43]
gi|162283199|gb|EDQ33485.1| recombinase A [Hoeflea phototrophica DFL-43]
Length = 360
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 189/324 (58%), Positives = 244/324 (75%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI SFGKGSIM LG + + + + TGS LDIALG GGLPKGR++EI
Sbjct: 16 KSKALDAALSQIERSFGKGSIMKLGANESVVEIETIPTGSLGLDIALGVGGLPKGRIIEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL IAEAQ++GG C FIDAEHALDP A +GV ENLL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALQTIAEAQKKGGICGFIDAEHALDPVYARKLGVDLENLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+V+DSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 136 ALEITDTLVRSGALDVLVIDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISR 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+ +E G+Q
Sbjct: 196 SNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSVKERDEVTGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E+IDL +K K+GA F+YN + +G+
Sbjct: 254 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELIDLGVKAGIVEKSGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E KQFL +N +V EE+ + LR+
Sbjct: 314 ENSKQFLRDNPAVAEEIELLLRQN 337
>gi|182679357|ref|YP_001833503.1| recA protein [Beijerinckia indica subsp. indica ATCC 9039]
gi|182635240|gb|ACB96014.1| recA protein [Beijerinckia indica subsp. indica ATCC 9039]
Length = 343
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 188/339 (55%), Positives = 249/339 (73%), Gaps = 9/339 (2%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI +FGKGSIM LG+S + +STGS LDIALG GGLP+GRV+EI
Sbjct: 3 KTKALDAALSQIERAFGKGSIMRLGKSQKAIEIETISTGSLGLDIALGVGGLPRGRVIEI 62
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL LHVIAEAQ++GG C FIDAEHALDP A +GV ++LL++QPD GEQ
Sbjct: 63 YGPESSGKTTLTLHVIAEAQKKGGVCAFIDAEHALDPVYARKLGVNLDDLLISQPDTGEQ 122
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+V+DSVAAL P+ E++GEMGD +QARLMSQALRKL+ S+S
Sbjct: 123 ALEITDTLVRSGAVDVLVIDSVAALTPRAEIEGEMGDNQPGLQARLMSQALRKLTASISR 182
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
SQT++IFINQ+R K+ +G P E T GGNALKFYASVRL+I+RIG +K E+ G+Q
Sbjct: 183 SQTMVIFINQIRMKIGVM-YGSP-ETTTGGNALKFYASVRLDIRRIGSIKDREDITGNQT 240
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E++DL +K K+GA F+Y+ + +G+
Sbjct: 241 RVKVVKNKVAPPFKQVEFDIMYGEGVSKVGELVDLGVKAGVVEKSGAWFSYDSQRLGQGR 300
Query: 303 EAFKQFLVENESVREELVIKLREK------LVVDHKEPQ 335
E K FL N V +++ + +RE ++D EP+
Sbjct: 301 ENAKTFLKNNPEVADKIEMTIRENSGLIADRILDQAEPE 339
>gi|90818658|emb|CAJ32634.1| recombinase A [Ochrobactrum anthropi]
Length = 355
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 187/324 (57%), Positives = 242/324 (74%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI +FGKGSIM LG++ + V TGS +LDIALG GGLPKGR+VEI
Sbjct: 16 KTKALDAALSQIERAFGKGSIMRLGKNAPVIEIETVPTGSLSLDIALGVGGLPKGRIVEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH IAEAQ++GG C F+DAEHALDP A +GV ENLL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RSG++DV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 136 ALEITDALVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISR 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+ +E +G+Q
Sbjct: 196 SNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKERDEVVGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 254 RVKVVKNKLAPPFKQVEFDIMYGAGVSKTGELVDLGVKAGVVEKSGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E KQ+L +N V E+ LR+
Sbjct: 314 ENAKQYLKDNPEVAREIETTLRQN 337
>gi|75675472|ref|YP_317893.1| recombinase A [Nitrobacter winogradskyi Nb-255]
gi|123745720|sp|Q3ST50.1|RECA_NITWN RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|74420342|gb|ABA04541.1| RecA protein [Nitrobacter winogradskyi Nb-255]
Length = 362
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 189/349 (54%), Positives = 255/349 (73%), Gaps = 8/349 (2%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGS+M LG++ V V+S+GS LDIALG GGLPKGR+VE+
Sbjct: 16 KSKALSAALSQIERQFGKGSVMKLGKNDKSMDVEVISSGSLGLDIALGVGGLPKGRIVEV 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH +AEAQ++GG C FIDAEHALDP A +GV ++LL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALHAVAEAQKKGGICAFIDAEHALDPVYARKLGVNVDDLLISQPDHGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+++DSVAALVP+ EL+GEMGDA +QARLMSQALRKL+ S++
Sbjct: 136 ALEIADTLVRSGAVDVLIIDSVAALVPRAELEGEMGDALPGLQARLMSQALRKLTASINK 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ +G P E T GGNALKFYASVRL+I+RIG +K+ +E +G+Q
Sbjct: 196 SNTMVIFINQIRMKIGVM-YGSP-ETTTGGNALKFYASVRLDIRRIGAIKERDEVVGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G+GIS+ EI+DL +K K+GA F+Y+ + +G+
Sbjct: 254 RVKVVKNKLAPPFKQVEFDIMYGEGISKMGEILDLGVKAGIVEKSGAWFSYDSQRMGQGR 313
Query: 303 EAFKQFLVENESV--REELVIKLREKLVVDH---KEPQTAVTDEDSTEE 346
E K FL N + + E+ I+ L+ + P+ D+++ E+
Sbjct: 314 ENAKAFLRANPDITAKVEMAIRQNSGLIAEQILAGSPERETDDDETAED 362
>gi|88813101|ref|ZP_01128342.1| recA protein [Nitrococcus mobilis Nb-231]
gi|88789585|gb|EAR20711.1| recA protein [Nitrococcus mobilis Nb-231]
Length = 351
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 186/322 (57%), Positives = 243/322 (75%), Gaps = 3/322 (0%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL AL QI FGKG++M +G R VPV+STGS +LDIALG GGLP+GRVVEIYGP
Sbjct: 10 ALNLALGQIEKQFGKGTVMRMGDMQAVRDVPVISTGSLSLDIALGIGGLPRGRVVEIYGP 69
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTTL L IAEAQ+ GG F+DAEHALDP A+ +GV LLL+QPD GEQAL
Sbjct: 70 ESSGKTTLTLQTIAEAQKAGGIAAFVDAEHALDPDYAQKLGVDINELLLSQPDTGEQALE 129
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ D L+RSG+VD++VVDSVAAL PK E++GEMGD+H+ +QARLMSQALRKL+ ++ S +
Sbjct: 130 ITDMLVRSGAVDIIVVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKRSHS 189
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
++IFINQ+R K+ FG P E T GGNALKFY+SVRL+I+RIG +KKG+E IG+Q VK
Sbjct: 190 LVIFINQIRMKIGVM-FGNP-ETTTGGNALKFYSSVRLDIRRIGAIKKGDEIIGNQTRVK 247
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRGKEAF 305
+VKNK+APPFK A+FE+ +G+GISR+ E+I+L ++ KAGA ++Y +R +GK+
Sbjct: 248 VVKNKMAPPFKQAEFEILYGEGISRQGELIELGVREGIVEKAGAWYSYAGERIGQGKDNV 307
Query: 306 KQFLVENESVREELVIKLREKL 327
+ FL V ++ +LRE+L
Sbjct: 308 RSFLKAQPEVAVQIESRLREQL 329
>gi|300023634|ref|YP_003756245.1| recA protein [Hyphomicrobium denitrificans ATCC 51888]
gi|299525455|gb|ADJ23924.1| recA protein [Hyphomicrobium denitrificans ATCC 51888]
Length = 377
Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/338 (57%), Positives = 254/338 (75%), Gaps = 12/338 (3%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
M KK AL+ AL QI +FGKGSIM LG + + + TGS LDIALG GGLPKGR+
Sbjct: 14 MDKKQ-ALEHALQQIDKNFGKGSIMRLGAN-DKVDIEAIPTGSLGLDIALGIGGLPKGRI 71
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+EIYGPE+SGKTTLALHV+AEAQ++GG C FIDAEHA+DP A+ +GVK E+LL++QPD
Sbjct: 72 IEIYGPESSGKTTLALHVVAEAQKRGGICAFIDAEHAIDPGYAKKLGVKIEDLLISQPDT 131
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + DTL+RSG+VDV+VVDSVAAL PK EL+GEMGD+ +QARLMSQALRKL+ S
Sbjct: 132 GEQALEIADTLVRSGAVDVLVVDSVAALTPKAELEGEMGDSLPGLQARLMSQALRKLTGS 191
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
+S S+ +++FINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+ EET+G
Sbjct: 192 ISKSKCMVVFINQIRMKIGIM-FGNP-ETTTGGNALKFYASVRLDIRRIGQIKEREETVG 249
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNF 299
+Q VK+VKNK+APPFK +F++ +G+GIS+ E+IDL +K K+GA +YN DR
Sbjct: 250 NQTRVKVVKNKVAPPFKQVEFDIMYGEGISKVGELIDLGVKAGIVEKSGAWMSYNGDRIG 309
Query: 300 RGKEAFKQFLVENESVREELVIKLR-------EKLVVD 330
+G+E K +L EN + E+ +R EK++V+
Sbjct: 310 QGRENAKTYLKENPKIAAEIENSIRANAGLIVEKMLVN 347
>gi|409437565|ref|ZP_11264674.1| Recombinase A (recA) [Rhizobium mesoamericanum STM3625]
gi|358029543|emb|CCA94648.1| recombinase A [Rhizobium sp. STM 3625]
gi|408750601|emb|CCM75832.1| Recombinase A (recA) [Rhizobium mesoamericanum STM3625]
Length = 362
Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust.
Identities = 191/331 (57%), Positives = 245/331 (74%), Gaps = 5/331 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI SFGKGSIM LG + + VSTGS LDIALG GGLPKGR++EI
Sbjct: 16 KSKALEAALSQIERSFGKGSIMKLGSNENVVEIETVSTGSLGLDIALGIGGLPKGRIIEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL IAE+Q++GG C F+DAEHALDP A +GV +NLL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALQTIAESQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+VVDSVAAL P+ E++GEMGD +QARLMSQALRKL+ S+S
Sbjct: 136 ALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDNLPGLQARLMSQALRKLTASISK 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+ EE IG+Q
Sbjct: 196 SNTMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAVKEREEVIGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 254 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIIEKSGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK--LVVDH 331
E K FL +N + E+ LR+ L+ D
Sbjct: 314 ENAKLFLRDNPDLLREIETALRQNAGLIADR 344
>gi|209542693|ref|YP_002274922.1| recA protein [Gluconacetobacter diazotrophicus PAl 5]
gi|209530370|gb|ACI50307.1| recA protein [Gluconacetobacter diazotrophicus PAl 5]
Length = 350
Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust.
Identities = 184/324 (56%), Positives = 249/324 (76%), Gaps = 4/324 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI +FGKGS+M LG+ V V+STGS LDIALG GGLP+GR+VEI
Sbjct: 9 KSKALEGALSQIERAFGKGSVMRLGQRAN-EAVDVISTGSLGLDIALGIGGLPRGRIVEI 67
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH IAEAQ++GG C FIDAEHALDP A +GV +NLL++QPD GEQ
Sbjct: 68 YGPESSGKTTLALHAIAEAQKKGGVCAFIDAEHALDPGYARKLGVDVDNLLISQPDAGEQ 127
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+VVDSVAALVP+ EL+G+MGD+H+ + ARLMSQALRKL+ ++S
Sbjct: 128 ALEIADTLVRSGAIDVLVVDSVAALVPRAELEGDMGDSHVGLHARLMSQALRKLTGTVSR 187
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IF+NQ+R K+ FG P E T GGNALKFYASVR++I+RIG +K +E +G+Q
Sbjct: 188 SNTMMIFLNQIRLKIGVM-FGSP-ETTTGGNALKFYASVRMDIRRIGQIKDKDEVVGNQT 245
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPF+ +F++ +G+GIS+ E+IDL +K K+GA F+Y+ + +G+
Sbjct: 246 RVKVVKNKMAPPFRQVEFDIVYGEGISKMGELIDLGVKAGIVEKSGAWFSYDSQRIGQGR 305
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E KQ+L E+ + ++ ++RE+
Sbjct: 306 ENSKQYLREHPEMAADIERRVREQ 329
>gi|398831799|ref|ZP_10589975.1| protein RecA [Phyllobacterium sp. YR531]
gi|398211501|gb|EJM98119.1| protein RecA [Phyllobacterium sp. YR531]
Length = 364
Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust.
Identities = 186/324 (57%), Positives = 244/324 (75%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI SFGKGSIM LGR+ + V TGS +LDIALG GGLPKGR+VEI
Sbjct: 16 KTKALDAALSQIERSFGKGSIMRLGRNEQVVEIETVPTGSLSLDIALGVGGLPKGRIVEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH IAEAQ++GG C F+DAEHALDP A +GV ENLL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+V+DSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 136 ALEITDTLVRSGAIDVLVIDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISR 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+ +E +G+Q
Sbjct: 196 SNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSLKERDEVVGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G+G+S+ E++DL +K K+G+ F+YN + +G+
Sbjct: 254 RVKVVKNKLAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGLVEKSGSWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK 326
+ K FL EN + E+ + +R+
Sbjct: 314 DNAKLFLKENPDLANEIELAIRQN 337
>gi|422009863|ref|ZP_16356845.1| recombinase A [Providencia rettgeri Dmel1]
gi|414092036|gb|EKT53715.1| recombinase A [Providencia rettgeri Dmel1]
Length = 355
Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust.
Identities = 199/347 (57%), Positives = 249/347 (71%), Gaps = 6/347 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LD+ALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDVALGAGGLPLGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR G C FIDAEHALDP A+ +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQRSGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV++VDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK GEE +GS+
Sbjct: 185 TSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKNGEEIVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+ E+IDL +KHK KAGA ++YN D+ +G
Sbjct: 243 TRVKVVKNKVAAPFKQAEFQILYGEGINTFGELIDLGVKHKLIEKAGAWYSYNGDKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTD--EDSTEE 346
K +L E+ V +E+ KLRE L+ E +A TD DS EE
Sbjct: 303 KANSTNYLKEHPEVAQEIDTKLREMLLNHTGEFSSAATDFINDSDEE 349
>gi|307945635|ref|ZP_07660971.1| protein RecA [Roseibium sp. TrichSKD4]
gi|307771508|gb|EFO30733.1| protein RecA [Roseibium sp. TrichSKD4]
Length = 355
Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/343 (56%), Positives = 251/343 (73%), Gaps = 6/343 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI +FGKGSIM +G+ V VSTGS LDIALG GGLPKGR+VEI
Sbjct: 16 KTKALDAALSQIERAFGKGSIMRMGQG-QAVEVQSVSTGSLGLDIALGIGGLPKGRIVEI 74
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH +AEAQ+ GG C F+DAEHALDP A +GV ++LL++QPD GEQ
Sbjct: 75 YGPESSGKTTLALHTVAEAQKTGGICAFVDAEHALDPIYARKLGVNIDDLLISQPDAGEQ 134
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+V+DSVAAL PK EL+GEMGD+ MQARLMSQALRKL+ S+S
Sbjct: 135 ALEIADTLVRSGAIDVLVIDSVAALTPKAELEGEMGDSLPGMQARLMSQALRKLTASISK 194
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K +E +G+Q
Sbjct: 195 SNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAIKDRDEVVGNQT 252
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPF+ +F++ +G+G+S+ E+IDL +K K+GA F+YN + +G+
Sbjct: 253 RVKVVKNKLAPPFRQVEFDIIYGEGVSKMGELIDLGVKGGIVEKSGAWFSYNSQRLGQGR 312
Query: 303 EAFKQFLVENESVREELVIKLREK--LVVDHKEPQTAVTDEDS 343
E KQFL +N + EE+ + +R+ L+ + T D+DS
Sbjct: 313 ENAKQFLRDNPEIAEEIELAVRQNAGLIAEAIIDPTGGEDDDS 355
>gi|418299453|ref|ZP_12911286.1| recombinase A [Agrobacterium tumefaciens CCNWGS0286]
gi|355534918|gb|EHH04214.1| recombinase A [Agrobacterium tumefaciens CCNWGS0286]
Length = 350
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 191/331 (57%), Positives = 246/331 (74%), Gaps = 5/331 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI SFGKGSIM LG + V VSTGS +LDIALG GGLPKGR+VEI
Sbjct: 3 KSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGRIVEI 62
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL IAEAQ++GG C F+DAEHALDP A +GV + LL++QPD GEQ
Sbjct: 63 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQGLLISQPDTGEQ 122
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 123 ALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 182
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+ ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+ EE +G+Q
Sbjct: 183 SKCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAVKEREEVVGNQT 240
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 241 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQGR 300
Query: 303 EAFKQFLVENESVREELVIKLREK--LVVDH 331
E K FL +N E+ + LR+ L+ D
Sbjct: 301 ENAKTFLRDNPETANEIELALRQNAGLIADR 331
>gi|212709393|ref|ZP_03317521.1| hypothetical protein PROVALCAL_00429 [Providencia alcalifaciens DSM
30120]
gi|422019432|ref|ZP_16365980.1| recombinase A [Providencia alcalifaciens Dmel2]
gi|212688305|gb|EEB47833.1| hypothetical protein PROVALCAL_00429 [Providencia alcalifaciens DSM
30120]
gi|414103271|gb|EKT64849.1| recombinase A [Providencia alcalifaciens Dmel2]
Length = 355
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 200/349 (57%), Positives = 251/349 (71%), Gaps = 6/349 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG T V +STGS +LD+ALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRT-MDVETISTGSLSLDVALGAGGLPLGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR G C FIDAEHALDP A+ +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQRSGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV++VDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK GEE +GS+
Sbjct: 185 NSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKNGEEIVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+ E+IDL +KHK KAGA ++YN D+ +G
Sbjct: 243 TRVKVVKNKVAAPFKQAEFQILYGEGINTFGELIDLGVKHKLIEKAGAWYSYNGDKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTD--EDSTEETV 348
K +L E+ V +E+ KLR+ L+ E ++A TD DS EE V
Sbjct: 303 KANSTTYLKEHPEVAQEIDTKLRDLLLNHTGEFKSAATDFINDSDEEEV 351
>gi|406942572|gb|EKD74773.1| hypothetical protein ACD_44C00335G0003 [uncultured bacterium]
Length = 350
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 190/323 (58%), Positives = 245/323 (75%), Gaps = 5/323 (1%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL A+ QI FGKGS+M LG S + V +STGS ALD ALG GGLP+GRVVEIYGP
Sbjct: 8 ALDAAISQIEKQFGKGSVMRLGDSAAVK-VETISTGSLALDAALG-GGLPRGRVVEIYGP 65
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTTL L VIAE Q++GG FIDAEHALDP AE +GV +LL++QPD GEQAL
Sbjct: 66 ESSGKTTLTLQVIAECQKKGGAAAFIDAEHALDPIYAEKLGVNVSDLLISQPDTGEQALE 125
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ D L+RSG VD+VV+DSVAAL PK E++GEMGD+HM +QARLMSQALRKL+ ++ S T
Sbjct: 126 ITDMLVRSGGVDIVVIDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKLTGNIKRSNT 185
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
+++FINQ+R K+ FG P E T GGNALKFYASVRL+I+R+G +KKGEE IGS+ VK
Sbjct: 186 LVVFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRVGAIKKGEEVIGSETRVK 243
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRGKEAF 305
+VKNK+APPF+ A FE+ +G+GISRE EIIDL ++H K+GA +++ +R +GK+
Sbjct: 244 VVKNKVAPPFRQAMFEILYGEGISREGEIIDLGVEHGIVEKSGAWYSFGKERIGQGKDNT 303
Query: 306 KQFLVENESVREELVIKLREKLV 328
+ +L EN + + + K+REKL+
Sbjct: 304 RAYLKENPKIAKVIEDKIREKLI 326
>gi|296393357|ref|YP_003658241.1| recA protein [Segniliparus rotundus DSM 44985]
gi|296180504|gb|ADG97410.1| recA protein [Segniliparus rotundus DSM 44985]
Length = 346
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/327 (57%), Positives = 247/327 (75%), Gaps = 4/327 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
++ AL+ AL QI SFGKGS+M LG + + + V+ TGS ALD+ALG GGLPKGRV+EI
Sbjct: 7 RNKALELALSQIDKSFGKGSVMRLGDQAS-QPIAVIPTGSIALDVALGIGGLPKGRVIEI 65
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ALH +A AQ GG FIDAEHALDP A+ +GV TENLL++QPD GEQ
Sbjct: 66 YGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPEYAKKLGVDTENLLVSQPDTGEQ 125
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D LIRSG++D++V+DSVAALVPK E++GEMGD+H+ +QARLMSQALRK++ +L+
Sbjct: 126 ALEIADMLIRSGALDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKMTGALNN 185
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T IFINQ+R K+ F GPTE T GG ALKFYASVRL+++RI +K G E + ++
Sbjct: 186 SGTTAIFINQLREKIGVM-F-GPTETTTGGKALKFYASVRLDVRRIETLKDGTEAVANRT 243
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VKIVKNK+APPFK A+F++ +G GISRE IIDL ++H K+GA +TY D +GK
Sbjct: 244 RVKIVKNKVAPPFKQAEFDIIYGAGISREGSIIDLGVEHGLIRKSGAWYTYGDEQLGQGK 303
Query: 303 EAFKQFLVENESVREELVIKLREKLVV 329
E ++FL+ N EE+ + LR+KL +
Sbjct: 304 ENARKFLIANPDKAEEIEMLLRDKLQI 330
>gi|118588632|ref|ZP_01546040.1| recombinase A [Stappia aggregata IAM 12614]
gi|118438618|gb|EAV45251.1| recombinase A [Labrenzia aggregata IAM 12614]
Length = 344
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 187/324 (57%), Positives = 244/324 (75%), Gaps = 4/324 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI +FGKGSIM +G+ V VSTGS LDIALG GGLP+GR+VEI
Sbjct: 3 KTKALDAALSQIERAFGKGSIMKMGQGQVV-EVQAVSTGSLGLDIALGIGGLPRGRIVEI 61
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH ++EAQ+ GG C FIDAEHALDP A +GV +NLL++QPD GEQ
Sbjct: 62 YGPESSGKTTLALHAVSEAQKTGGICAFIDAEHALDPIYARKLGVDIDNLLISQPDAGEQ 121
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+V+DSVAAL PK EL+GEMGD+ MQARLMSQALRKL+ S+S
Sbjct: 122 ALEIADTLVRSGAIDVLVIDSVAALTPKAELEGEMGDSLPGMQARLMSQALRKLTASISK 181
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+ ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K +E +G+Q
Sbjct: 182 SKCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAIKDRDEVVGNQT 239
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPF+ +F++ +G+G+S+ E+IDL +K K+GA F+YN + +G+
Sbjct: 240 RVKVVKNKLAPPFRQVEFDIVYGEGVSKTGELIDLGVKGNIVEKSGAWFSYNSQRLGQGR 299
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E KQFL +N + +E+ + +R+
Sbjct: 300 ENAKQFLKDNPEIADEIELAIRQN 323
>gi|427431120|ref|ZP_18920760.1| RecA protein [Caenispirillum salinarum AK4]
gi|425877952|gb|EKV26675.1| RecA protein [Caenispirillum salinarum AK4]
Length = 362
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 188/346 (54%), Positives = 252/346 (72%), Gaps = 5/346 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL A+ QI +FGKGSIM LG+ T V +STGS LD+ALG GGLPKGR++E+
Sbjct: 16 KQKALDAAVSQIERAFGKGSIMRLGQRETVIDVEAISTGSLGLDLALGIGGLPKGRIIEV 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALHV+AEAQ++GG C F+DAEHALDP A +GV + LL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALHVVAEAQKKGGACAFVDAEHALDPVYARKLGVNLDELLISQPDAGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+V+DSVAALVP+ EL+GEMGD+H+ +QARLMSQALRKL+ S+S
Sbjct: 136 ALEIADTLVRSGAVDVLVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKLTGSVSR 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+T++IFINQ+R K+ FG P E T GGNALKFY+SVR+ I+RIG +K +E +G+Q
Sbjct: 196 SKTMVIFINQIRMKIGVM-FGNP-ETTTGGNALKFYSSVRMEIRRIGAIKDRDEVVGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYND-RNFRGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E++DL +K K+G+ F+YN R +G+
Sbjct: 254 RVKVVKNKVAPPFKQVEFDIMYGEGVSKTGELLDLGVKAGIVEKSGSWFSYNSTRIGQGR 313
Query: 303 EAFKQFLVENESVREEL--VIKLREKLVVDHKEPQTAVTDEDSTEE 346
E K +L EN E+ I+ L+ D + DE + E
Sbjct: 314 ENAKNYLKENPETAAEIEKAIRTNAGLLEDDMQSGPGGLDESTNAE 359
>gi|418020662|ref|ZP_12659890.1| protein RecA [Candidatus Regiella insecticola R5.15]
gi|347603980|gb|EGY28718.1| protein RecA [Candidatus Regiella insecticola R5.15]
Length = 362
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 197/358 (55%), Positives = 248/358 (69%), Gaps = 4/358 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 7 NKKKALAAALTQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 65
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A+ +GV +NLL +QPD GE
Sbjct: 66 IYGPESSGKTTLTLQVIASAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDNGE 125
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV++VDSVAAL PK E++GEMGDAHM + AR+MS+A+RK + +L+
Sbjct: 126 QALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEMGDAHMGLAARMMSKAMRKFAGNLN 185
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K G+E IGS
Sbjct: 186 NANTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGSIKNGDEVIGSD 243
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK+VKNK+A PFK A+F++ +G+GI+ E+IDL +KHK KAGA ++YN +G
Sbjct: 244 TRVKVVKNKIAAPFKQAEFQIYYGEGINLHGELIDLGVKHKLIEKAGAWYSYNGNKIGQG 303
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETVSTISPDSTDEE 359
K Q+L ENE+++ EL KLR L+ A T + E+ T EE
Sbjct: 304 KANASQYLKENEAIKSELNEKLRAMLLGGGSNATDADTAHPAVTESFVAEKNSETSEE 361
>gi|295810382|emb|CBL81075.1| recombinase A [Agrobacterium larrymoorei]
Length = 319
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 188/317 (59%), Positives = 242/317 (76%), Gaps = 3/317 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI SFGKGSIM LG + V VSTGS +LDIALG GGLPKGR++EI
Sbjct: 1 KSKALEAALSQIERSFGKGSIMKLGSNENVIEVETVSTGSLSLDIALGIGGLPKGRIIEI 60
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL IAEAQ++GG C F+DAEHALDP A +GV +NLL++QPD GEQ
Sbjct: 61 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 120
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 121 ALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 180
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+ EE +G+Q
Sbjct: 181 SKTMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSVKEREEVVGNQT 238
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 239 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQGR 298
Query: 303 EAFKQFLVENESVREEL 319
K FL +N +V E+
Sbjct: 299 XNAKGFLRDNPAVANEI 315
>gi|159184959|ref|NP_354855.2| RecA protein [Agrobacterium fabrum str. C58]
gi|335036228|ref|ZP_08529555.1| recombinase A [Agrobacterium sp. ATCC 31749]
gi|417633|sp|P33156.1|RECA_AGRT5 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|159140237|gb|AAK87640.2| RecA protein [Agrobacterium fabrum str. C58]
gi|333792119|gb|EGL63489.1| recombinase A [Agrobacterium sp. ATCC 31749]
Length = 363
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/331 (57%), Positives = 247/331 (74%), Gaps = 5/331 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI SFGKGSIM LG + V VSTGS +LDIALG GGLPKGR++EI
Sbjct: 16 KSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGRIIEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL IAEAQ++GG C F+DAEHALDP A +GV ++LL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQSLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+V+DSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 136 ALEITDTLVRSGAVDVLVIDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+ ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+ EE +G+Q
Sbjct: 196 SKCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAVKEREEVVGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 254 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK--LVVDH 331
E K FL +N E+ + LR+ L+ D
Sbjct: 314 ENAKTFLRDNPDTANEIELALRQNAGLIADR 344
>gi|207366314|emb|CAQ58052.1| recombinase A [Agrobacterium tumefaciens]
gi|207366316|emb|CAQ58053.1| recombinase A [Agrobacterium tumefaciens]
Length = 323
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 188/321 (58%), Positives = 242/321 (75%), Gaps = 3/321 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI SFGKGSIM LG + V VSTGS +LDIALG GGLPKGR+VEI
Sbjct: 5 KSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGRIVEI 64
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL IAEAQ++GG C F+DAEHALDP A +GV +NLL++QPD GEQ
Sbjct: 65 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 124
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VD++VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 125 ALEITDTLVRSGAVDILVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 184
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+ ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+ EE +G+Q
Sbjct: 185 SKCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAVKEREEVVGNQT 242
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 243 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQGR 302
Query: 303 EAFKQFLVENESVREELVIKL 323
E K FL +N E+ + L
Sbjct: 303 ENAKTFLRDNPETANEIELAL 323
>gi|387129198|ref|YP_006292088.1| recombinase A [Methylophaga sp. JAM7]
gi|386270487|gb|AFJ01401.1| RecA protein [Methylophaga sp. JAM7]
Length = 347
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 181/319 (56%), Positives = 243/319 (76%), Gaps = 3/319 (0%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL AL QI FGKG++M LG R + VSTGS LD+ALG GGLP+GRV+EIYGP
Sbjct: 8 ALGVALGQIEKQFGKGAVMRLGDGSAARDIEAVSTGSIGLDVALGIGGLPRGRVIEIYGP 67
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTTL LH IAE Q+ GG F+DAEHALDP AE +GV ++LL++QPD GEQAL
Sbjct: 68 ESSGKTTLTLHAIAEMQKMGGTAAFVDAEHALDPLYAEKLGVNIDDLLVSQPDTGEQALE 127
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ D L+RSG+VD+VVVDSVAAL PK E++G+MGD+HM +QARLMSQALRKL+ ++ S T
Sbjct: 128 IADMLVRSGAVDIVVVDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTANIKRSNT 187
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +KKG+E +G++ VK
Sbjct: 188 LVIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAIKKGDEILGNETRVK 245
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGKEAF 305
+VKNK+APPFK +F++ +G+GISRE E+IDL + K+GA ++Y+ +R +GK+
Sbjct: 246 VVKNKVAPPFKQVEFDILYGEGISREGELIDLGVAANIVEKSGAWYSYDGNRIGQGKDNV 305
Query: 306 KQFLVENESVREELVIKLR 324
+Q+L +N+++ ++ K+R
Sbjct: 306 RQYLKDNDAIAADIESKIR 324
>gi|406595815|ref|YP_006746945.1| recombinase A [Alteromonas macleodii ATCC 27126]
gi|407682766|ref|YP_006797940.1| recombinase A [Alteromonas macleodii str. 'English Channel 673']
gi|407686682|ref|YP_006801855.1| recombinase A [Alteromonas macleodii str. 'Balearic Sea AD45']
gi|406373136|gb|AFS36391.1| recombinase A [Alteromonas macleodii ATCC 27126]
gi|407244377|gb|AFT73563.1| recombinase A [Alteromonas macleodii str. 'English Channel 673']
gi|407290062|gb|AFT94374.1| recombinase A [Alteromonas macleodii str. 'Balearic Sea AD45']
Length = 348
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 188/327 (57%), Positives = 246/327 (75%), Gaps = 4/327 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL A+ QI FGKG+IM LG + + +STGS +DIALG GGLP GRVVEI
Sbjct: 5 KSKALTAAVGQIEKQFGKGAIMRLGDN-QAMDIEAISTGSLTIDIALGIGGLPCGRVVEI 63
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIAEAQR+G C F+DAEHALDP AE +GV + LL++QPD GEQ
Sbjct: 64 YGPESSGKTTLTLQVIAEAQRKGKTCAFVDAEHALDPVYAEKLGVNIDELLVSQPDTGEQ 123
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RSG+VDVV+VDSVAAL PK E++G+MGD+H+ +QARLMSQALRKL+ ++
Sbjct: 124 ALEICDMLVRSGAVDVVIVDSVAALTPKAEIEGDMGDSHVGLQARLMSQALRKLTANIKR 183
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T+ IFINQ+R K+ FG P E T GGNALKFY+SVRL+I+RIG VK+G+E +G++
Sbjct: 184 SNTLCIFINQIRMKIGVM-FGNP-ETTTGGNALKFYSSVRLDIRRIGAVKEGDEVVGNET 241
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGK 302
VK+VKNK+APPFK A+F + +G+GIS+E+E+IDL +K K KAGA ++Y DR +GK
Sbjct: 242 RVKVVKNKVAPPFKQAEFMIRYGEGISKEAELIDLGVKQKLVDKAGAWYSYKGDRIGQGK 301
Query: 303 EAFKQFLVENESVREELVIKLREKLVV 329
+FL EN + E+ K+R++L++
Sbjct: 302 ANVMKFLKENPEIANEIETKIRQELLL 328
>gi|424800808|ref|ZP_18226350.1| RecA protein [Cronobacter sakazakii 696]
gi|429105890|ref|ZP_19167759.1| RecA protein [Cronobacter malonaticus 681]
gi|423236529|emb|CCK08220.1| RecA protein [Cronobacter sakazakii 696]
gi|426292613|emb|CCJ93872.1| RecA protein [Cronobacter malonaticus 681]
Length = 354
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 200/348 (57%), Positives = 247/348 (70%), Gaps = 6/348 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG T V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRT-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR G C FIDAEHALDP A +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQRAGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV+VVDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALARSGAVDVLVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+GEE +GS+
Sbjct: 185 NSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKEGEEVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +KHK KAGA ++YN +G
Sbjct: 243 TRVKVVKNKVAAPFKQAEFQILYGEGINFYGELVDLGVKHKLIEKAGAWYSYNGEKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKE-PQTAVTDED-STEET 347
K FL EN+ + +E+ KLRE L+ + P V D D EET
Sbjct: 303 KANATNFLKENKPMADEIEKKLREMLLNNQDSTPDFTVDDNDGGVEET 350
>gi|410618380|ref|ZP_11329328.1| recombination protein RecA [Glaciecola polaris LMG 21857]
gi|410162099|dbj|GAC33466.1| recombination protein RecA [Glaciecola polaris LMG 21857]
Length = 345
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/345 (55%), Positives = 251/345 (72%), Gaps = 8/345 (2%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVV 61
+ K AL A+ QI FGKGSIM LG + T V +STGS LDIALG GG P GR+V
Sbjct: 4 TDKSKALASAMAQIEKQFGKGSIMKLGENRT-MDVETISTGSLGLDIALGAGGFPMGRIV 62
Query: 62 EIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCG 121
EIYGPE+SGKTTL L V+AEAQR G C F+DAEHALDP A +GV + LL++QPD G
Sbjct: 63 EIYGPESSGKTTLTLEVVAEAQRNGKVCAFVDAEHALDPIYARKLGVNIDELLVSQPDTG 122
Query: 122 EQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSL 181
EQAL + D L RSG+VD++VVDSVAAL PK E++G+MGD+HM +QAR++SQA+RKL+ +L
Sbjct: 123 EQALEICDMLTRSGAVDIIVVDSVAALTPKAEIEGDMGDSHMGLQARMLSQAMRKLTGNL 182
Query: 182 SLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGS 241
S T++IFINQ+R K+ FG P E T GGNALKFYASVR +I+RIG VK+G+E G+
Sbjct: 183 KQSNTMMIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRCDIRRIGAVKEGDEVTGN 240
Query: 242 QIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYND-RNFR 300
+ VK+VKNK+APPFK A+F++ +G+GI+R+ E+IDL +KH F KAGA ++Y D R +
Sbjct: 241 ETRVKVVKNKIAPPFKQAEFQIMYGEGINRDGELIDLGVKHGFVQKAGAWYSYGDERIGQ 300
Query: 301 GKEAFKQFLVENESVREELVIKLREKLVVDH----KEPQTAVTDE 341
GK ++L E++ VR+EL KLR+ L+ KEP + +E
Sbjct: 301 GKANSTKYLKEHKEVRDELNKKLRDLLLSPKESLPKEPLESAPEE 345
>gi|430003827|emb|CCF19618.1| Recombinase A (recA) [Rhizobium sp.]
Length = 348
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 191/331 (57%), Positives = 244/331 (73%), Gaps = 5/331 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI SFGKGSIM LG VSTGS +LDIALG GGLPKGR+VEI
Sbjct: 3 KSKALDAALSQIERSFGKGSIMKLGAKENVVETETVSTGSLSLDIALGIGGLPKGRIVEI 62
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL IAEAQ++GG C F+DAEHALDP A +GV ENLL++QPD GEQ
Sbjct: 63 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPIYARKLGVDLENLLISQPDTGEQ 122
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 123 ALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISR 182
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+ EE +G+Q
Sbjct: 183 SNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSVKEREEVVGNQT 240
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 241 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQGR 300
Query: 303 EAFKQFLVENESVREELVIKLREK--LVVDH 331
E K FL +N + E+ + LR+ L+ D
Sbjct: 301 ENAKTFLKDNPELAREIELALRQNAGLIADR 331
>gi|317493954|ref|ZP_07952371.1| recA bacterial DNA recombination protein [Enterobacteriaceae
bacterium 9_2_54FAA]
gi|365835407|ref|ZP_09376827.1| RecA protein [Hafnia alvei ATCC 51873]
gi|316918281|gb|EFV39623.1| recA bacterial DNA recombination protein [Enterobacteriaceae
bacterium 9_2_54FAA]
gi|364566169|gb|EHM43868.1| RecA protein [Hafnia alvei ATCC 51873]
Length = 350
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 194/345 (56%), Positives = 253/345 (73%), Gaps = 5/345 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + T + VSTGS +LD+ALG GGLP GRVVE
Sbjct: 4 NKQRALAAALGQIEKQFGKGSIMRLGDTQT-LDIDSVSTGSLSLDVALGIGGLPMGRVVE 62
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
I+GPE+SGKTTL L VIA AQ G C FIDAEHALDP A +GV+ ++LL++QPD GE
Sbjct: 63 IFGPESSGKTTLTLSVIASAQAAGKTCAFIDAEHALDPIYAGKLGVQVDDLLISQPDTGE 122
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L+RSG+VDV+VVDSVAAL PK E++GEMGD+H+ +QARLMSQALRKL+ ++
Sbjct: 123 QALEICDALVRSGAVDVIVVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIK 182
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ ++IFINQ+R K+ FG P E T GGNALKFY+SVRL+I+RIG +K G+E +G++
Sbjct: 183 NANCLVIFINQIRMKIGVM-FGNP-ETTTGGNALKFYSSVRLDIRRIGAIKDGDEVVGNE 240
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+APPF+ A+F++ +G GIS+ESE+IDL +KHK K+GA + YN D+ +G
Sbjct: 241 TRVKVVKNKVAPPFRQAEFQILYGAGISKESELIDLGVKHKLVDKSGAWYAYNGDKIGQG 300
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEE 346
K ++L EN ++R EL KLRE L++ H + A + EE
Sbjct: 301 KSNSMKYLQENPAIRAELDTKLRE-LLLSHAAAENANHKPSADEE 344
>gi|304570555|ref|YP_266064.2| recA protein [Candidatus Pelagibacter ubique HTCC1062]
Length = 383
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/364 (52%), Positives = 259/364 (71%), Gaps = 13/364 (3%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVV 61
++K+ AL A+ QI +FGKGS+M LG+ V +STGS +LD+ALG GGLPKGRV+
Sbjct: 20 NEKNKALDAAMSQIIDNFGKGSVMKLGQR-RAMDVESISTGSLSLDVALGIGGLPKGRVI 78
Query: 62 EIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCG 121
E+YGPE+SGKTTLAL V+AEAQ+ GG C FIDAEHALDP A+ +GV TE LL++QPD G
Sbjct: 79 EVYGPESSGKTTLALQVLAEAQKAGGICAFIDAEHALDPIYAKKLGVDTEELLISQPDTG 138
Query: 122 EQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSL 181
EQAL + DTL++SGS+ V+V+DSVAAL P+ E++GEMGD H+ +Q+RLMSQALRKL+ S+
Sbjct: 139 EQALEIADTLVKSGSISVIVIDSVAALTPRAEIEGEMGDHHVGLQSRLMSQALRKLTGSI 198
Query: 182 SLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGS 241
S + T++IFINQ+R K+ FG P E T GGNALKFY+SVR++I+RIG +K G+E IG+
Sbjct: 199 SSTNTMMIFINQIRMKIGVM-FGSP-ETTSGGNALKFYSSVRMDIRRIGAIKNGDEIIGN 256
Query: 242 QIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-R 300
VK+VKNK+APPFK +F+L +GKGIS+ E++DL K KAGA + Y +
Sbjct: 257 STRVKVVKNKVAPPFKVVEFDLMYGKGISKVGELVDLGSKADIVEKAGAWYAYKGEKIGQ 316
Query: 301 GKEAFKQFLVENESVREELVIKLREKLVVDHK-------EPQTAVTD--EDSTEETVSTI 351
G+E K +L +N + E+ + +REK V K +P+ A D E+ ET +
Sbjct: 317 GRENAKTYLEQNPKIAAEIEMAIREKAGVIAKKIEGNPLDPEKAAKDQIEEPKLETKEEV 376
Query: 352 SPDS 355
+P S
Sbjct: 377 TPPS 380
>gi|444299288|emb|CCP29593.1| recombinase A, partial [Agrobacterium fabrum]
Length = 321
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 187/323 (57%), Positives = 244/323 (75%), Gaps = 3/323 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI SFGKGSIM LG + V VSTGS +LDIALG GGLPKGR++EI
Sbjct: 1 KSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGRIIEI 60
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL IAEAQ++GG C F+DAEHALDP A +GV ++LL++QPD GEQ
Sbjct: 61 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQSLLISQPDTGEQ 120
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+V+DSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 121 ALEITDTLVRSGAVDVLVIDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 180
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+ ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+ EE +G+Q
Sbjct: 181 SKCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAVKEREEVVGNQT 238
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 239 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQGR 298
Query: 303 EAFKQFLVENESVREELVIKLRE 325
E K FL +N E+ + LR+
Sbjct: 299 ENAKTFLRDNPDTANEIELALRQ 321
>gi|378581076|ref|ZP_09829726.1| DNA strand exchange and recombination protein with protease and
nuclease activity [Pantoea stewartii subsp. stewartii
DC283]
gi|377816155|gb|EHT99260.1| DNA strand exchange and recombination protein with protease and
nuclease activity [Pantoea stewartii subsp. stewartii
DC283]
Length = 356
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 194/353 (54%), Positives = 249/353 (70%), Gaps = 4/353 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPEASGKTTL L VIA AQR+G C FIDAEHALDP A+ +GV +NLL +QPD GE
Sbjct: 65 IYGPEASGKTTLTLQVIAAAQRKGKTCAFIDAEHALDPVYAKKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV++VDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALARSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+G+ +GS+
Sbjct: 185 QSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAIKEGDNVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +KHK KAGA ++Y D+ +G
Sbjct: 243 TRVKVVKNKIAAPFKQAEFQIMYGEGINTFGELVDLGVKHKLIEKAGAWYSYKGDKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETVSTISPD 354
K FL EN +V E+ +KLR+ L+ ++ A D E S + D
Sbjct: 303 KANASNFLKENAAVANEIDLKLRDMLLNGAEQNDAADFSADDVENAASEANED 355
>gi|444436558|gb|AGE09647.1| recombinase A, partial [Agrobacterium tumefaciens]
Length = 323
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 187/321 (58%), Positives = 243/321 (75%), Gaps = 3/321 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI SFGKGSIM LG + V +STGS +LDIALG GGLPKGR+VEI
Sbjct: 5 KSKALEAALSQIERSFGKGSIMKLGSNENVVEVETISTGSLSLDIALGIGGLPKGRIVEI 64
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL IAEAQ++GG C F+DAEHALDP A +GV +NLL++QPD GEQ
Sbjct: 65 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 124
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VD++VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 125 ALEITDTLVRSGAVDILVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 184
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+ ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+ EE +G+Q
Sbjct: 185 SKCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAVKEREEVVGNQT 242
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 243 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQGR 302
Query: 303 EAFKQFLVENESVREELVIKL 323
E K FL +N + E+ + L
Sbjct: 303 ENAKTFLRDNPEMANEIELAL 323
>gi|388456113|ref|ZP_10138408.1| recombinase A [Fluoribacter dumoffii Tex-KL]
Length = 348
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 190/343 (55%), Positives = 247/343 (72%), Gaps = 4/343 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGS+M +G S R + +STGS LDIALG GGLPKGR+VEI
Sbjct: 5 KQKALSAALSQIERQFGKGSVMRMGDSNVSRDIEAISTGSLGLDIALGIGGLPKGRIVEI 64
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIAE Q+ GG FIDAEHALDPS A+ +GV + LL++QPD GEQ
Sbjct: 65 YGPESSGKTTLTLQVIAECQKMGGTAAFIDAEHALDPSYAQKLGVNVDELLVSQPDTGEQ 124
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RS +VDV++VDSVAAL PK E++GEMGD+H+ +QARLMSQALRKL+ ++
Sbjct: 125 ALEITDMLVRSAAVDVIIVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKR 184
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +KKGEE +GS+
Sbjct: 185 SNTLVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKKGEEILGSET 242
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ + +GISRESEII+L ++ K+GA ++Y +GK
Sbjct: 243 RVKVVKNKVAPPFKMTEFDILYNEGISRESEIINLGVQLNLIEKSGAWYSYKGEKIGQGK 302
Query: 303 EAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTE 345
+ + +L EN + L ++R +L ++ K P A D E
Sbjct: 303 DNVRLYLKENSQIAAALEQQIRMEL-LEKKLPMLASASADEFE 344
>gi|268593119|ref|ZP_06127340.1| protein RecA [Providencia rettgeri DSM 1131]
gi|291311389|gb|EFE51842.1| protein RecA [Providencia rettgeri DSM 1131]
Length = 355
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/347 (57%), Positives = 249/347 (71%), Gaps = 6/347 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LD+ALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDVALGAGGLPLGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR G C FIDAEHALDP A+ +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQRSGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV++VDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK GEE IGS+
Sbjct: 185 TSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKNGEEIIGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+ E+IDL +KHK KAGA ++YN D+ +G
Sbjct: 243 TRVKVVKNKVAAPFKQAEFQILYGEGINTFGELIDLGVKHKLIEKAGAWYSYNGDKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTD--EDSTEE 346
K +L E+ V +E+ KLRE L+ E +A TD D+ EE
Sbjct: 303 KANSTNYLKEHPEVAQEIDTKLREMLLNHTGEFSSAATDFISDADEE 349
>gi|207366250|emb|CAQ58020.1| recombinase A [Agrobacterium tumefaciens]
gi|207366252|emb|CAQ58021.1| recombinase A [Agrobacterium tumefaciens]
gi|207366254|emb|CAQ58022.1| recombinase A [Agrobacterium tumefaciens]
gi|207366256|emb|CAQ58023.1| recombinase A [Agrobacterium tumefaciens]
gi|207366258|emb|CAQ58024.1| recombinase A [Agrobacterium tumefaciens]
gi|207366260|emb|CAQ58025.1| recombinase A [Agrobacterium tumefaciens]
gi|207366262|emb|CAQ58026.1| recombinase A [Agrobacterium tumefaciens]
gi|207366264|emb|CAQ58027.1| recombinase A [Agrobacterium tumefaciens]
gi|207366266|emb|CAQ58028.1| recombinase A [Agrobacterium tumefaciens]
gi|207366268|emb|CAQ58029.1| recombinase A [Agrobacterium tumefaciens]
gi|207366270|emb|CAQ58030.1| recombinase A [Agrobacterium tumefaciens]
gi|207366272|emb|CAQ58031.1| recombinase A [Agrobacterium tumefaciens]
gi|207366274|emb|CAQ58032.1| recombinase A [Agrobacterium tumefaciens]
gi|207366276|emb|CAQ58033.1| recombinase A [Agrobacterium tumefaciens]
gi|444436478|gb|AGE09607.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436480|gb|AGE09608.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436482|gb|AGE09609.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436484|gb|AGE09610.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436486|gb|AGE09611.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436488|gb|AGE09612.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436490|gb|AGE09613.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436492|gb|AGE09614.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436494|gb|AGE09615.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436496|gb|AGE09616.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436498|gb|AGE09617.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436500|gb|AGE09618.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436502|gb|AGE09619.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436504|gb|AGE09620.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436506|gb|AGE09621.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436508|gb|AGE09622.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436510|gb|AGE09623.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436512|gb|AGE09624.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436514|gb|AGE09625.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436516|gb|AGE09626.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436518|gb|AGE09627.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436520|gb|AGE09628.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436522|gb|AGE09629.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436524|gb|AGE09630.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436526|gb|AGE09631.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436528|gb|AGE09632.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436530|gb|AGE09633.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436532|gb|AGE09634.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436534|gb|AGE09635.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436536|gb|AGE09636.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436538|gb|AGE09637.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436540|gb|AGE09638.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436542|gb|AGE09639.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436544|gb|AGE09640.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436546|gb|AGE09641.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436548|gb|AGE09642.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436550|gb|AGE09643.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436552|gb|AGE09644.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436554|gb|AGE09645.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436556|gb|AGE09646.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436560|gb|AGE09648.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436562|gb|AGE09649.1| recombinase A, partial [Agrobacterium tumefaciens]
Length = 323
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 187/321 (58%), Positives = 243/321 (75%), Gaps = 3/321 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI SFGKGSIM LG + V +STGS +LDIALG GGLPKGR+VEI
Sbjct: 5 KSKALEAALSQIERSFGKGSIMKLGSNENVVEVETISTGSLSLDIALGIGGLPKGRIVEI 64
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL IAEAQ++GG C F+DAEHALDP A +GV +NLL++QPD GEQ
Sbjct: 65 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 124
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VD++VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 125 ALEITDTLVRSGAVDILVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 184
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+ ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+ EE +G+Q
Sbjct: 185 SKCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAVKEREEVVGNQT 242
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 243 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQGR 302
Query: 303 EAFKQFLVENESVREELVIKL 323
E K FL +N + E+ + L
Sbjct: 303 ENAKTFLRDNPEMASEIELAL 323
>gi|260599086|ref|YP_003211657.1| recombinase A [Cronobacter turicensis z3032]
gi|429087901|ref|ZP_19150633.1| RecA protein [Cronobacter universalis NCTC 9529]
gi|429101513|ref|ZP_19163487.1| RecA protein [Cronobacter turicensis 564]
gi|260218263|emb|CBA33202.1| Protein recA [Cronobacter turicensis z3032]
gi|426288162|emb|CCJ89600.1| RecA protein [Cronobacter turicensis 564]
gi|426507704|emb|CCK15745.1| RecA protein [Cronobacter universalis NCTC 9529]
Length = 354
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 200/348 (57%), Positives = 247/348 (70%), Gaps = 6/348 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG T V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRT-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR G C FIDAEHALDP A +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQRAGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV+VVDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALARSGAVDVLVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+GEE +GS+
Sbjct: 185 NSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKEGEEVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +KHK KAGA ++YN +G
Sbjct: 243 TRVKVVKNKVAAPFKQAEFQILYGEGINFYGELVDLGVKHKLIEKAGAWYSYNGEKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHK-EPQTAVTDED-STEET 347
K FL EN+ + +E+ KLRE L+ + P V D D EET
Sbjct: 303 KANATNFLKENKPMADEIEKKLREMLLNNQDATPDFTVDDNDGGVEET 350
>gi|253990686|ref|YP_003042042.1| Protein recA (Recombinase A) [Photorhabdus asymbiotica]
gi|253782136|emb|CAQ85300.1| Protein recA (Recombinase A) [Photorhabdus asymbiotica]
Length = 357
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/339 (57%), Positives = 246/339 (72%), Gaps = 4/339 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A+ +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPVYAKKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV++VDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK GEE IGS+
Sbjct: 185 SSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGSVKNGEEVIGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+ E+IDL +KHK KAGA ++YN D+ +G
Sbjct: 243 TRVKVVKNKVAAPFKQAEFQIMYGEGINTYGELIDLGVKHKLIEKAGAWYSYNGDKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTD 340
K +L E+ + EL KLRE L+ + E +A +D
Sbjct: 303 KANATTYLKEHLEIATELDKKLREMLLHNAGEFSSAASD 341
>gi|85715199|ref|ZP_01046183.1| recombinase A [Nitrobacter sp. Nb-311A]
gi|85698114|gb|EAQ35987.1| recombinase A [Nitrobacter sp. Nb-311A]
Length = 362
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/347 (55%), Positives = 254/347 (73%), Gaps = 9/347 (2%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGS+M LG++ V VVS+GS LDIALG GGLPKGR+VE+
Sbjct: 16 KSKALSAALSQIERQFGKGSVMKLGKNDKSMDVEVVSSGSLGLDIALGVGGLPKGRIVEV 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH +AEAQ++GG C FIDAEHALDP A +GV ++LL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALHAVAEAQKKGGICAFIDAEHALDPVYARKLGVNVDDLLISQPDHGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+++DSVAALVP+ EL+GEMGDA +QARLMSQALRKL+ S++
Sbjct: 136 ALEIADTLVRSGAVDVLIIDSVAALVPRAELEGEMGDALPGLQARLMSQALRKLTASINK 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ +G P E T GGNALKFYASVRL+I+RIG +K+ +E +G+Q
Sbjct: 196 SNTMVIFINQIRMKIGVM-YGSP-ETTTGGNALKFYASVRLDIRRIGAIKERDEVVGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G+GIS+ EI+DL +K K+GA F+Y+ + +G+
Sbjct: 254 RVKVVKNKLAPPFKQVEFDIMYGEGISKMGEILDLGVKAGIVEKSGAWFSYDSQRMGQGR 313
Query: 303 EAFKQFLVENESV--REELVIKLREKLVVDH---KEPQTAVTDEDST 344
E K FL N + + E+ I+ L+ + P+ TD+D T
Sbjct: 314 ENAKAFLRANPDITAKVEMAIRQNSGLIAEQILAGSPERE-TDDDET 359
>gi|347736632|ref|ZP_08869218.1| RecA protein [Azospirillum amazonense Y2]
gi|346919818|gb|EGY01190.1| RecA protein [Azospirillum amazonense Y2]
Length = 358
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 185/322 (57%), Positives = 243/322 (75%), Gaps = 3/322 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI +FGKGSIM LG V +STGS LDIALG GGLP+GR++EI
Sbjct: 14 KQKALDAALGQIERAFGKGSIMKLGAKEASMEVDAISTGSLGLDIALGIGGLPRGRIIEI 73
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH IAEAQ+ GG C F+DAEHALDPS A +GV ++LL++QPD GEQ
Sbjct: 74 YGPESSGKTTLALHAIAEAQKSGGTCAFVDAEHALDPSYARKLGVNVDDLLVSQPDAGEQ 133
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+VVDSVAALVP+ EL+GEMGD+H+ +QARLMSQALRKL+ S+S
Sbjct: 134 ALEITDTLVRSGAIDVLVVDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKLTSSISK 193
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYAS+RL+I+RIG +K + +G+Q
Sbjct: 194 SNCLVIFINQIRLKIGVM-FGNP-ETTTGGNALKFYASIRLDIRRIGAIKDRDNVVGNQT 251
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGK 302
VK+VKNKLAPPF+ +F++ +G+G+S+ E+IDL ++ K+GA F+Y+ R +G+
Sbjct: 252 RVKVVKNKLAPPFRVVEFDIMYGEGVSKVGELIDLGIQAGVVEKSGAWFSYDGQRVGQGR 311
Query: 303 EAFKQFLVENESVREELVIKLR 324
E KQFL N ++ + + K+R
Sbjct: 312 ENAKQFLRTNPAIAKAIEEKVR 333
>gi|270157136|ref|ZP_06185793.1| recombinase A [Legionella longbeachae D-4968]
gi|289164459|ref|YP_003454597.1| RecA protein [Legionella longbeachae NSW150]
gi|269989161|gb|EEZ95415.1| recombinase A [Legionella longbeachae D-4968]
gi|288857632|emb|CBJ11472.1| RecA protein [Legionella longbeachae NSW150]
Length = 347
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 190/340 (55%), Positives = 250/340 (73%), Gaps = 4/340 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGS+M +G S R + +STGS LDIALG GGLPKGR+VEI
Sbjct: 5 KQKALSAALSQIERQFGKGSVMRMGDSSVARDIEAISTGSLGLDIALGIGGLPKGRIVEI 64
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIAE Q+ GG FIDAEHALDPS A+ +GV + LL++QPD GEQ
Sbjct: 65 YGPESSGKTTLTLQVIAECQKIGGTAAFIDAEHALDPSYAQKLGVNVDELLVSQPDTGEQ 124
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RSG+VDV++VDSVAAL PK E++GEMGD+H+ +QARLMSQALRKL+ ++
Sbjct: 125 ALEITDMLVRSGAVDVIIVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKR 184
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +KKGEE +GS+
Sbjct: 185 SNTLVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKKGEEILGSET 242
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ + +GISRESEII+LA++ K+GA ++Y +GK
Sbjct: 243 RVKVVKNKVAPPFKVTEFDILYNEGISRESEIINLAVQLNLIEKSGAWYSYKGEKIGQGK 302
Query: 303 EAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDED 342
+ + +L E+ V L ++R +L ++ K P A +++
Sbjct: 303 DNVRLYLKEHSQVAATLEQQIRTEL-LEKKLPVPAAAEDE 341
>gi|378765970|ref|YP_005194431.1| recombinase A [Pantoea ananatis LMG 5342]
gi|386016889|ref|YP_005935185.1| protein RecA [Pantoea ananatis AJ13355]
gi|386078227|ref|YP_005991752.1| recombinase A RecA [Pantoea ananatis PA13]
gi|327394967|dbj|BAK12389.1| protein RecA [Pantoea ananatis AJ13355]
gi|354987408|gb|AER31532.1| recombinase A RecA [Pantoea ananatis PA13]
gi|365185444|emb|CCF08394.1| recombinase A [Pantoea ananatis LMG 5342]
Length = 356
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/353 (55%), Positives = 250/353 (70%), Gaps = 4/353 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPEASGKTTL L VIA AQR+G C FIDAEHALDP A+ +GV +NLL +QPD GE
Sbjct: 65 IYGPEASGKTTLTLQVIAAAQRKGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV++VDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALARSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+G+ +GS+
Sbjct: 185 QSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAIKEGDNVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +KHK KAGA ++Y D+ +G
Sbjct: 243 TRVKVVKNKIAAPFKQAEFQIMYGEGINTFGELVDLGVKHKLIEKAGAWYSYKGDKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETVSTISPD 354
K FL EN +V +EL IKLRE L+ + A + E+ S + D
Sbjct: 303 KANAGNFLKENAAVADELDIKLREMLLNGGDQNIAADVAGNDVEKAASEANED 355
>gi|254456368|ref|ZP_05069797.1| protein RecA [Candidatus Pelagibacter sp. HTCC7211]
gi|207083370|gb|EDZ60796.1| protein RecA [Candidatus Pelagibacter sp. HTCC7211]
Length = 382
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 191/363 (52%), Positives = 256/363 (70%), Gaps = 13/363 (3%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
+ +K+ AL A+ QIT +FGKGS+M LG+ + VSTGS +LD+ALG GGLPKGR+
Sbjct: 19 IKEKNKALDAAIAQITDNFGKGSVMKLGQK-RAMDIESVSTGSLSLDLALGIGGLPKGRI 77
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
VE+YGPE+SGKTTLAL V+AEAQ+ GG C F+DAEHALDP A+ +GV TE LL++QPD
Sbjct: 78 VEVYGPESSGKTTLALQVVAEAQKAGGICAFVDAEHALDPVYAKKLGVNTEELLISQPDA 137
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + DTL++SGS+ V+V+DSVAAL PK E++GEMGD H+ +Q+RLMSQALRKL+ S
Sbjct: 138 GEQALEIADTLVKSGSISVIVIDSVAALTPKAEIEGEMGDHHVGLQSRLMSQALRKLTSS 197
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
+S + T++IFINQ+R K+ FG P E T GGNALKFY+SVR++I+RIG +K +E IG
Sbjct: 198 ISNTNTMMIFINQIRMKIGVM-FGSP-ETTSGGNALKFYSSVRMDIRRIGAIKDKDEIIG 255
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF- 299
+ VK+VKNK+APPFK +F+L +GKGIS+ E++DL K K+GA + Y
Sbjct: 256 NSTRVKVVKNKVAPPFKVVEFDLMYGKGISKMGELVDLGSKADIIEKSGAWYAYKGEKIG 315
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVDHK-------EPQTAVTD--EDSTEETVST 350
+G+E K +L +N V E+ + +REK V K +P+ A D ED E
Sbjct: 316 QGRENAKTYLAQNPKVAAEIELAIREKAGVIQKKIEGNPLDPEKAAKDQIEDPKAEKKEE 375
Query: 351 ISP 353
+ P
Sbjct: 376 VVP 378
>gi|444299276|emb|CCP29587.1| recombinase A, partial [Agrobacterium genomosp. 1]
Length = 322
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 187/321 (58%), Positives = 243/321 (75%), Gaps = 3/321 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI SFGKGSIM LG + V +STGS +LDIALG GGLPKGR+VEI
Sbjct: 4 KSKALEAALSQIERSFGKGSIMKLGSNENVVEVETISTGSLSLDIALGIGGLPKGRIVEI 63
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL IAEAQ++GG C F+DAEHALDP A +GV +NLL++QPD GEQ
Sbjct: 64 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 123
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VD++VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 124 ALEITDTLVRSGAVDILVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 183
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+ ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+ EE +G+Q
Sbjct: 184 SKCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAVKEREEVVGNQT 241
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 242 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQGR 301
Query: 303 EAFKQFLVENESVREELVIKL 323
E K FL +N + E+ + L
Sbjct: 302 ENAKTFLRDNPEMASEIELAL 322
>gi|162148079|ref|YP_001602540.1| protein recA (recombinase A) [Gluconacetobacter diazotrophicus PAl
5]
gi|161786656|emb|CAP56239.1| Protein recA (Recombinase A) [Gluconacetobacter diazotrophicus PAl
5]
Length = 381
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 184/324 (56%), Positives = 249/324 (76%), Gaps = 4/324 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI +FGKGS+M LG+ V V+STGS LDIALG GGLP+GR+VEI
Sbjct: 40 KSKALEGALSQIERAFGKGSVMRLGQRAN-EAVDVISTGSLGLDIALGIGGLPRGRIVEI 98
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH IAEAQ++GG C FIDAEHALDP A +GV +NLL++QPD GEQ
Sbjct: 99 YGPESSGKTTLALHAIAEAQKKGGVCAFIDAEHALDPGYARKLGVDVDNLLISQPDAGEQ 158
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+VVDSVAALVP+ EL+G+MGD+H+ + ARLMSQALRKL+ ++S
Sbjct: 159 ALEIADTLVRSGAIDVLVVDSVAALVPRAELEGDMGDSHVGLHARLMSQALRKLTGTVSR 218
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IF+NQ+R K+ FG P E T GGNALKFYASVR++I+RIG +K +E +G+Q
Sbjct: 219 SNTMMIFLNQIRLKIGVM-FGSP-ETTTGGNALKFYASVRMDIRRIGQIKDKDEVVGNQT 276
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPF+ +F++ +G+GIS+ E+IDL +K K+GA F+Y+ + +G+
Sbjct: 277 RVKVVKNKMAPPFRQVEFDIVYGEGISKMGELIDLGVKAGIVEKSGAWFSYDSQRIGQGR 336
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E KQ+L E+ + ++ ++RE+
Sbjct: 337 ENSKQYLREHPEMAADIERRVREQ 360
>gi|146328886|ref|YP_001209208.1| DNA recombination protein RecA [Dichelobacter nodosus VCS1703A]
gi|166220643|sp|A5EW90.1|RECA_DICNV RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|146232356|gb|ABQ13334.1| DNA recombination protein RecA [Dichelobacter nodosus VCS1703A]
Length = 350
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 181/323 (56%), Positives = 241/323 (74%), Gaps = 3/323 (0%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL L Q+ FGKG++M LG V + +STGS LDIALG GGLPKGR+VEIYGP
Sbjct: 8 ALTAVLTQLDKQFGKGTVMRLGEQVAAHDIQAISTGSLTLDIALGIGGLPKGRIVEIYGP 67
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTT+ LHVIAEAQ+ GG FIDAEHALDP A +GV T++L + QPD GEQAL
Sbjct: 68 ESSGKTTMMLHVIAEAQKNGGTAAFIDAEHALDPIYARKLGVNTDDLYVTQPDTGEQALE 127
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ D L+RSG+ DV+VVDSVAAL PK E++GEMGD+H+ +QARLMSQALRKL+ ++ + T
Sbjct: 128 ICDALVRSGAFDVIVVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTGNIKRANT 187
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
+++FINQ+R K+ FG P E T GGNALKFYASVR++I+RIG +K+G+E +G++ VK
Sbjct: 188 LVVFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRMDIRRIGSIKEGDEVLGNETRVK 245
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGKEAF 305
+VKNK+APPFK A+F++ +G+G+SRE EII LA+ K+GA ++Y D +GKE
Sbjct: 246 VVKNKVAPPFKQAEFDILYGQGVSREGEIIQLAVNADIMQKSGAWYSYRDEKIGQGKEKV 305
Query: 306 KQFLVENESVREELVIKLREKLV 328
+ +L E+ V +E+ K+REK +
Sbjct: 306 RLYLKEHPDVAQEIETKIREKFI 328
>gi|144123|gb|AAA22999.1| RecA protein [Brucella abortus]
Length = 360
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 188/324 (58%), Positives = 244/324 (75%), Gaps = 4/324 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI +FGKGSIM LG++ + VSTGS +LDIALG GGLPKGR+VEI
Sbjct: 16 KTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIVEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH IAEAQ++GG C F+DAEHALDP A +GV ENLL++QP GEQ
Sbjct: 76 YGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVHLENLLISQPITGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+VVDSVAAL P+ E++GEMGD+H +QARLMSQA+RKL+ S+S
Sbjct: 136 ALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSH-GLQARLMSQAVRKLTGSISR 194
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+ +E +G+Q
Sbjct: 195 SNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKERDEVVGNQT 252
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 253 RVKVVKNKLAPPFKQVEFDIMYGAGVSKVGELVDLGVKAGVVEKSGAWFSYNSQRLGQGR 312
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E KQ+L +N V E+ LR+
Sbjct: 313 ENAKQYLKDNPEVAREIETTLRQN 336
>gi|383501258|ref|YP_005414617.1| recombinase A [Rickettsia australis str. Cutlack]
gi|378932269|gb|AFC70774.1| recombinase A [Rickettsia australis str. Cutlack]
Length = 343
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 188/327 (57%), Positives = 248/327 (75%), Gaps = 6/327 (1%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPR-HVPVVSTGSFALDIALGTGGLPKGRV 60
+ K+ A+ AL QI S+GKGS+M LG+ P + VSTGS LDIALG GG+PKGR+
Sbjct: 4 TDKERAIAAALVQIEKSYGKGSVMKLGQR--PNVDIEAVSTGSLGLDIALGIGGVPKGRI 61
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+EI+GPE+SGKTTL LH+IAEAQ++GG C FIDAEHALDP+ A+ +GV + L+++QPD
Sbjct: 62 IEIFGPESSGKTTLTLHLIAEAQKKGGICAFIDAEHALDPAYAKKLGVNIDELIISQPDT 121
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + DTLIRSG +D++++DSVAALVPK E++GEMGDA MA QARLMSQALRKL+ S
Sbjct: 122 GEQALEITDTLIRSGGIDMIIIDSVAALVPKSEIEGEMGDAQMASQARLMSQALRKLTAS 181
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
++ + I +FINQ+R K+ FG P E T GGNALKFYASVR++I+RIG +K EE IG
Sbjct: 182 INRTNCITVFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRIDIRRIGSIKDKEEVIG 239
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYND-RNF 299
SQ VK+VKNK++ PFKTA F++ +G GIS+E EIIDL +K K+G+ F+YN+ R
Sbjct: 240 SQTRVKVVKNKVSLPFKTADFDIMYGSGISKEGEIIDLGVKLDIVEKSGSWFSYNNVRIG 299
Query: 300 RGKEAFKQFLVENESVREELVIKLREK 326
+G+E KQ+L E+ + E+ +REK
Sbjct: 300 QGRENVKQYLKEHPQISNEIEKIIREK 326
>gi|422022022|ref|ZP_16368531.1| recombinase A [Providencia sneebia DSM 19967]
gi|414097772|gb|EKT59425.1| recombinase A [Providencia sneebia DSM 19967]
Length = 354
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 197/347 (56%), Positives = 251/347 (72%), Gaps = 6/347 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LD+ALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDVALGAGGLPLGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR G C FIDAEHALDP A+ +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQRSGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV++VDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK G+E +GS+
Sbjct: 185 TSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKNGDEVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+ E+IDL +KHK KAGA ++YN D+ +G
Sbjct: 243 TRVKVVKNKVAAPFKQAEFQILYGEGINTYGELIDLGVKHKLIEKAGAWYSYNGDKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTD--EDSTEE 346
K +L E+ ++ +E+ KLRE L+ E +A TD EDS E+
Sbjct: 303 KANSTTYLKEHPAIADEIDKKLREMLLNHTGEFSSAATDFIEDSEEQ 349
>gi|389795203|ref|ZP_10198334.1| protein RecA [Rhodanobacter fulvus Jip2]
gi|388431111|gb|EIL88210.1| protein RecA [Rhodanobacter fulvus Jip2]
Length = 345
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 191/333 (57%), Positives = 246/333 (73%), Gaps = 4/333 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKG+IM +G V + VSTGS LDIALG GGLP+GRVVE
Sbjct: 4 NKRKALTSALGQIEKQFGKGAIMRMGDRVN-EAIETVSTGSLGLDIALGVGGLPRGRVVE 62
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTT+ L IA QR GG FIDAEHALDP+ AE +GVK ++LL++QPD GE
Sbjct: 63 IYGPESSGKTTMTLQAIASCQRAGGTAAFIDAEHALDPTYAEKLGVKVDDLLVSQPDTGE 122
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L+RSG+VD+VVVDSVAAL PK E++GEMGD+H+ + ARLMSQALRKL+ ++
Sbjct: 123 QALEIADMLVRSGAVDMVVVDSVAALTPKAEIEGEMGDSHVGLHARLMSQALRKLTANIK 182
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+G+E IGS+
Sbjct: 183 KSGTLVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAVKRGDEIIGSE 240
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+APPF+ +FE+ +G+G SRE EII+L + K+GA ++YN DR +G
Sbjct: 241 TRVKVVKNKVAPPFRQCEFEILYGEGTSREGEIIELGVAQNLIEKSGAWYSYNGDRIGQG 300
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEP 334
KE +Q++ E+ + E+ LRE+L+V +P
Sbjct: 301 KENVRQYMREHPDMTNEIDRLLRERLLVPVGKP 333
>gi|442608742|ref|ZP_21023489.1| RecA protein [Pseudoalteromonas luteoviolacea B = ATCC 29581]
gi|441750138|emb|CCQ09551.1| RecA protein [Pseudoalteromonas luteoviolacea B = ATCC 29581]
Length = 349
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 190/328 (57%), Positives = 244/328 (74%), Gaps = 4/328 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG S + +STGS +DIALG GGLP GR+VE
Sbjct: 4 NKQKALDAALSQIERQFGKGSIMKLGDS-QALDIESISTGSLGIDIALGIGGLPTGRIVE 62
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIAEAQ+QG C F+DAEHALDP A+ +GV + LL++QPD GE
Sbjct: 63 IYGPESSGKTTLTLQVIAEAQKQGKTCAFVDAEHALDPVYAQKLGVNVDELLVSQPDTGE 122
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L+RSG+VDVV+VDSVAAL PK E++GEMGD H+ +QARLMSQALRKL+ ++
Sbjct: 123 QALEICDMLVRSGAVDVVIVDSVAALTPKAEIEGEMGDTHVGLQARLMSQALRKLTANIK 182
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+ IFINQ+R K+ FG P E T GGNALKFYASVR++I+RIG VK+G+E +G++
Sbjct: 183 RSNTLCIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRIDIRRIGSVKEGDEVVGNE 240
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VKIVKNK+APPFK A+F + +G+GIS+E E+IDL ++HK K+GA ++YN +G
Sbjct: 241 TRVKIVKNKVAPPFKQAEFIIMYGEGISKEGELIDLGVQHKIVDKSGAWYSYNGNKIGQG 300
Query: 302 KEAFKQFLVENESVREELVIKLREKLVV 329
K +FL EN ++ E+ KLR+ L++
Sbjct: 301 KSNSIKFLKENVAIANEIEGKLRDMLLL 328
>gi|91762224|ref|ZP_01264189.1| recA protein [Candidatus Pelagibacter ubique HTCC1002]
gi|91718026|gb|EAS84676.1| recA protein [Candidatus Pelagibacter ubique HTCC1002]
Length = 383
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/364 (52%), Positives = 259/364 (71%), Gaps = 13/364 (3%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVV 61
++K+ AL A+ QI +FGKGS+M LG+ V +STGS +LD+ALG GGLPKGRV+
Sbjct: 20 NEKNKALDAAMSQIIDNFGKGSVMKLGQR-RAMDVESISTGSLSLDVALGIGGLPKGRVI 78
Query: 62 EIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCG 121
E+YGPE+SGKTTLAL V+AEAQ+ GG C FIDAEHALDP A+ +GV TE LL++QPD G
Sbjct: 79 EVYGPESSGKTTLALQVLAEAQKAGGICAFIDAEHALDPIYAKKLGVDTEELLISQPDTG 138
Query: 122 EQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSL 181
EQAL + DTL++SGS+ V+V+DSVAAL P+ E++GEMGD H+ +Q+RLMSQALRKL+ S+
Sbjct: 139 EQALEIADTLVKSGSISVIVIDSVAALTPRAEIEGEMGDHHVGLQSRLMSQALRKLTGSI 198
Query: 182 SLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGS 241
S + T++IFINQ+R K+ FG P E T GGNALKFY+SVR++I+RIG +K G+E IG+
Sbjct: 199 SSTNTMMIFINQIRMKIGVM-FGSP-ETTSGGNALKFYSSVRMDIRRIGAIKNGDEIIGN 256
Query: 242 QIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-R 300
VK+VKNK+APPFK +F+L +GKGIS+ E++DL K KAGA + Y +
Sbjct: 257 STRVKVVKNKVAPPFKVVEFDLMYGKGISKVGELVDLGAKADIVEKAGAWYAYKGEKIGQ 316
Query: 301 GKEAFKQFLVENESVREELVIKLREKLVVDHK-------EPQTAVTD--EDSTEETVSTI 351
G+E K +L +N + E+ + +REK V K +P+ A D E+ ET +
Sbjct: 317 GRENAKIYLEQNPQIAAEIEMAIREKAGVIAKKIEGNPLDPEKAAKDQIEEPKLETKEEV 376
Query: 352 SPDS 355
+P S
Sbjct: 377 TPPS 380
>gi|304399192|ref|ZP_07381059.1| recA protein [Pantoea sp. aB]
gi|440757504|ref|ZP_20936689.1| RecA protein [Pantoea agglomerans 299R]
gi|304353246|gb|EFM17626.1| recA protein [Pantoea sp. aB]
gi|436428750|gb|ELP26402.1| RecA protein [Pantoea agglomerans 299R]
Length = 356
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 191/327 (58%), Positives = 242/327 (74%), Gaps = 4/327 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A+ +GV ENLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIASAQRKGKTCAFIDAEHALDPVYAKKLGVDIENLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV++VDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALARSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+G+ +GS+
Sbjct: 185 QSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAIKEGDNVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +KHK KAGA ++YN D+ +G
Sbjct: 243 TRVKVVKNKIAAPFKQAEFQIMYGEGINTFGELVDLGVKHKLIEKAGAWYSYNGDKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLV 328
K FL EN +V E+ +KLRE L+
Sbjct: 303 KSNAGNFLKENAAVANEIDLKLREMLL 329
>gi|145590013|ref|YP_001156610.1| recA protein [Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
gi|145048419|gb|ABP35046.1| RecA protein [Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
Length = 363
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 191/346 (55%), Positives = 253/346 (73%), Gaps = 5/346 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGSIM LG + + + VVS+GS LDIALG GGL +GRV+EI
Sbjct: 21 KQKALTAALAQIEKQFGKGSIMRLGDAEISQDIQVVSSGSLGLDIALGVGGLARGRVIEI 80
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL LH IAE Q+ GG C FIDAEHALD A +GV NLL++QPD GEQ
Sbjct: 81 YGPESSGKTTLTLHAIAEMQKLGGTCAFIDAEHALDVQYASRLGVDVNNLLISQPDTGEQ 140
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RSGS+D++V+DSVAALVP+ E++G+MGD+ +QARLMSQALRKL+ ++
Sbjct: 141 ALEIADALVRSGSIDLIVIDSVAALVPRAEIEGDMGDSLPGLQARLMSQALRKLTGAIKR 200
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
+ T +IFINQ+R K+ FG P E T GGNALKFYAS+RL+I+RIG +KKG+E +G++
Sbjct: 201 TNTTVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASMRLDIRRIGSIKKGDEVVGNET 258
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGK 302
VK+VKNK++PPF+ A F++ +G GISRE EIID+ ++ K+G+ ++YN DR +GK
Sbjct: 259 RVKVVKNKVSPPFREAIFDIMYGAGISREGEIIDMGVEADIVDKSGSWYSYNGDRIGQGK 318
Query: 303 EAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETV 348
+ ++FL EN ++ +++ K+REKL V K VTD S EE V
Sbjct: 319 DNVREFLKENPAIAKDIEAKIREKLGV--KSGSAVVTDVLSEEEEV 362
>gi|429094304|ref|ZP_19156851.1| RecA protein [Cronobacter dublinensis 1210]
gi|426740686|emb|CCJ82964.1| RecA protein [Cronobacter dublinensis 1210]
Length = 354
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 197/342 (57%), Positives = 244/342 (71%), Gaps = 5/342 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG T V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRT-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR G C FIDAEHALDP A +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQRAGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV+VVDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALARSGAVDVLVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+GEE +GS+
Sbjct: 185 NSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKEGEEVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +KHK KAGA ++YN +G
Sbjct: 243 TRVKVVKNKVAAPFKQAEFQILYGEGINFYGELVDLGVKHKLIEKAGAWYSYNGEKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKE-PQTAVTDED 342
K FL EN+ + +E+ KLRE L+ + P V D D
Sbjct: 303 KANATNFLKENKPMADEIEKKLREMLLNNQDSTPDFTVDDND 344
>gi|37525216|ref|NP_928560.1| recombinase A [Photorhabdus luminescens subsp. laumondii TTO1]
gi|60393010|sp|Q7N7A6.1|RECA_PHOLL RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|36784643|emb|CAE13543.1| RecA protein (Recombinase A) [Photorhabdus luminescens subsp.
laumondii TTO1]
Length = 355
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/339 (57%), Positives = 246/339 (72%), Gaps = 4/339 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A+ +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV++VDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK GEE +GS+
Sbjct: 185 SSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGSVKNGEEVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+ E+IDL +KHK KAGA ++YN D+ +G
Sbjct: 243 TRVKVVKNKVAAPFKQAEFQIMYGEGINTYGELIDLGVKHKLVEKAGAWYSYNGDKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTD 340
K +L E+ V EL KLRE L+ + E +A +D
Sbjct: 303 KANATIYLKEHPEVATELDKKLREMLLHNAGEFNSAASD 341
>gi|386817726|ref|ZP_10104944.1| Protein recA [Thiothrix nivea DSM 5205]
gi|386422302|gb|EIJ36137.1| Protein recA [Thiothrix nivea DSM 5205]
Length = 347
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 185/322 (57%), Positives = 242/322 (75%), Gaps = 3/322 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKG++M +G + R V V+STGS LDIALG GGLPKGRVVEI
Sbjct: 5 KKKALAAALGQIERQFGKGAVMRMGDTNAIRDVDVISTGSLTLDIALGIGGLPKGRVVEI 64
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIAE Q+QGG F+DAEHALDP A+ +GV ++LL++QPD GEQ
Sbjct: 65 YGPESSGKTTLTLQVIAECQKQGGTAAFVDAEHALDPIYAQKLGVNVDDLLVSQPDTGEQ 124
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RSG+VD+VV+DSVAAL PK E++G+MGD+H+ +QARLMSQALRKL+ ++
Sbjct: 125 ALEIADMLVRSGAVDIVVIDSVAALTPKAEIEGDMGDSHVGLQARLMSQALRKLTGNIKR 184
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ FG P E T GGNALKFY+SVRL+I+RIG +KKG+E GS+
Sbjct: 185 SNTLVIFINQIRMKIGVM-FGNP-ETTTGGNALKFYSSVRLDIRRIGAIKKGDEITGSET 242
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK A+FE+ +G+GISRE E+IDL +K + KAGA ++Y +GK
Sbjct: 243 RVKVVKNKMAPPFKQAEFEILYGEGISREGELIDLGVKQELVGKAGAWYSYKGEKIGQGK 302
Query: 303 EAFKQFLVENESVREELVIKLR 324
+ + +L E+ + E+ +R
Sbjct: 303 DNARTYLKEHPEIAAEIEQAIR 324
>gi|238784096|ref|ZP_04628110.1| hypothetical protein yberc0001_12020 [Yersinia bercovieri ATCC
43970]
gi|238714942|gb|EEQ06940.1| hypothetical protein yberc0001_12020 [Yersinia bercovieri ATCC
43970]
Length = 354
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/348 (56%), Positives = 250/348 (71%), Gaps = 6/348 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A+ +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV++VDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK G+ +GS+
Sbjct: 185 NANTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKDGDVVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +KHK KAGA ++YN D+ +G
Sbjct: 243 TRVKVVKNKIAAPFKQAEFQILYGEGININGELVDLGVKHKLIEKAGAWYSYNGDKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVV--DHKEPQTAVTDEDSTEET 347
K +L EN +V EL KLRE L+ + ++P T D T+ET
Sbjct: 303 KANASNYLKENPAVAAELDKKLREMLLNGGNGEQPVVTATVADETDET 350
>gi|381402650|ref|ZP_09927334.1| recombinase A [Pantoea sp. Sc1]
gi|380735849|gb|EIB96912.1| recombinase A [Pantoea sp. Sc1]
Length = 355
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 190/327 (58%), Positives = 242/327 (74%), Gaps = 4/327 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A+ +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQRKGKTCAFIDAEHALDPVYAKKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV++VDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALARSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+G+ +GS+
Sbjct: 185 QSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAIKEGDNVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +KHK KAGA ++YN D+ +G
Sbjct: 243 TRVKVVKNKIAAPFKQAEFQIMYGEGINTFGELVDLGVKHKLIEKAGAWYSYNGDKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLV 328
K FL EN +V E+ +KLRE L+
Sbjct: 303 KSNASNFLKENAAVANEIDLKLRELLL 329
>gi|212639361|ref|YP_002315881.1| recombinase A [Anoxybacillus flavithermus WK1]
gi|212560841|gb|ACJ33896.1| RecA/RadA recombinase (multifunctional SOS repair regulator)
[Anoxybacillus flavithermus WK1]
Length = 391
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 188/343 (54%), Positives = 251/343 (73%), Gaps = 4/343 (1%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
++ + AL+QAL QI FGKGSIM LG T R + VS+GS ALDIALG GG P+GR+
Sbjct: 47 LNDRQAALEQALKQIEKQFGKGSIMKLGEQ-TDRQISTVSSGSLALDIALGVGGYPRGRI 105
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+EIYGPE+SGKTT+ALH IAE Q+QGG FIDAEHALDP AE +GV + LLL+QPD
Sbjct: 106 IEIYGPESSGKTTVALHAIAEVQKQGGQAAFIDAEHALDPVYAEKLGVNIDELLLSQPDT 165
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + + L+RSG+VD++V+DSVAALVPK E++GEMGDAH+ +QARLMSQALRKLS +
Sbjct: 166 GEQALEIAEALVRSGAVDIIVIDSVAALVPKAEIEGEMGDAHVGLQARLMSQALRKLSGA 225
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
++ S+TI IFINQ+R K+ FG P E T GG ALKFYASVRL ++R +K+G + +G
Sbjct: 226 INKSKTIAIFINQIREKVGVM-FGNP-ETTPGGRALKFYASVRLEVRRAEQIKQGNDMVG 283
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF- 299
++ +K+VKNK+APPFKTA ++ +G+GIS+E EIID+ + K+GA ++Y D
Sbjct: 284 NKTKIKVVKNKVAPPFKTADVDIMYGEGISKEGEIIDMGAELDIIQKSGAWYSYKDERLG 343
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDED 342
+G+E KQFL EN + EE+ ++R+ + T V ++D
Sbjct: 344 QGRENAKQFLKENPHIMEEIAREIRQHYGITTGASATPVREDD 386
>gi|395234464|ref|ZP_10412688.1| recombinase A [Enterobacter sp. Ag1]
gi|394730910|gb|EJF30737.1| recombinase A [Enterobacter sp. Ag1]
Length = 354
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/349 (55%), Positives = 250/349 (71%), Gaps = 5/349 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR G C FIDAEHALDP A+ +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQRSGKTCAFIDAEHALDPVYAKKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV++VDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALARSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK GE +GS+
Sbjct: 185 QSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKDGENVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +KHK KAGA ++YN +G
Sbjct: 243 TRVKVVKNKIAAPFKQAEFQILYGEGINFYGELVDLGVKHKLIEKAGAWYSYNGEKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETVST 350
K FL EN+ + EE+ KLRE +++++++ T +D E+ V T
Sbjct: 303 KANASNFLKENKPMAEEIEKKLRE-MLLNNQDSTPDFTVDDHDEDAVET 350
>gi|297539361|ref|YP_003675130.1| recombination protein RecA [Methylotenera versatilis 301]
gi|297258708|gb|ADI30553.1| recA protein [Methylotenera versatilis 301]
Length = 342
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 185/326 (56%), Positives = 239/326 (73%), Gaps = 3/326 (0%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM +G + VSTGS LDIALG GGLP+GRV+E
Sbjct: 4 NKSKALSAALAQIEKQFGKGSIMRMGDGNIGEDIQAVSTGSLGLDIALGIGGLPRGRVIE 63
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA+ Q+ GG FIDAEHALDP A +GV +LL++QPD GE
Sbjct: 64 IYGPESSGKTTLTLSVIAQMQKSGGVAAFIDAEHALDPQYAAKLGVNVPDLLISQPDTGE 123
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL +VD L+RSGSVD+VV+DSVAAL P+ E++GEMGD+HM +QARLMSQALRKL+ ++
Sbjct: 124 QALEIVDMLVRSGSVDIVVIDSVAALTPRAEIEGEMGDSHMGLQARLMSQALRKLTGNIK 183
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+R G +KKG+E IGS+
Sbjct: 184 RTNTMVIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRTGAIKKGDEVIGSE 241
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK++KNK+APPFK A+F++ +G+GISRE EII+L K KAG+ ++YN +G
Sbjct: 242 TRVKVIKNKVAPPFKQAEFDILYGEGISREGEIIELGANLKMVEKAGSWYSYNGEKIGQG 301
Query: 302 KEAFKQFLVENESVREELVIKLREKL 327
K+ ++FL N ++ E+ K+R +
Sbjct: 302 KDNAREFLRSNPAIANEIDAKIRANM 327
>gi|350560891|ref|ZP_08929730.1| recA protein [Thioalkalivibrio thiocyanoxidans ARh 4]
gi|349780998|gb|EGZ35306.1| recA protein [Thioalkalivibrio thiocyanoxidans ARh 4]
Length = 375
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 185/330 (56%), Positives = 245/330 (74%), Gaps = 3/330 (0%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL AL QI FGKG++M +G R + V+STGS ALD+ALG GGLP+GRVVE+YGP
Sbjct: 40 ALAAALGQIERQFGKGAVMRMGDGTAVRDIEVISTGSLALDVALGIGGLPRGRVVEVYGP 99
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTTL L V+AE Q+ GG FIDAEHALDP A+ +GV + LL+AQPD GEQAL
Sbjct: 100 ESSGKTTLTLQVVAECQKLGGTAAFIDAEHALDPGYAQKLGVNVDELLIAQPDTGEQALE 159
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ D L+RSG+VD+VVVDSVAAL PK E++GEMGDAH+ +QARLMSQALRKL+ ++ S T
Sbjct: 160 IADMLVRSGAVDLVVVDSVAALTPKAEIEGEMGDAHVGLQARLMSQALRKLTANIKRSNT 219
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
+++FINQ+R K+ FG P E T GGNALKFY+SVR++I+RIG +K+G+E +G++ VK
Sbjct: 220 LVVFINQIRMKIGVM-FGSP-ETTTGGNALKFYSSVRMDIRRIGAIKRGDEVVGNETRVK 277
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRGKEAF 305
+VKNK+APPFK A FE+ +G+GISR E+I+L +K KAGA ++Y +R +GKE
Sbjct: 278 VVKNKMAPPFKEAFFEILYGEGISRLGEVIELGVKQGLVDKAGAWYSYKGERIGQGKENA 337
Query: 306 KQFLVENESVREELVIKLREKLVVDHKEPQ 335
+QFL E+ + E+ LRE+ + + Q
Sbjct: 338 RQFLKEHPEMANEIEQALRERYLPERSHAQ 367
>gi|319784063|ref|YP_004143539.1| recA protein [Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|317169951|gb|ADV13489.1| recA protein [Mesorhizobium ciceri biovar biserrulae WSM1271]
Length = 365
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 186/324 (57%), Positives = 241/324 (74%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI +FGKGSIM LG + + V TGS LDIALG GGLP+GR++EI
Sbjct: 16 KSKALDAALSQIERAFGKGSIMRLGANEQVVEIETVPTGSLGLDIALGVGGLPRGRIIEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH +AEAQ++GG C F+DAEHALDP A +GV ENLL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALHTVAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 136 ALEICDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISR 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK +E +G+Q
Sbjct: 196 SNTMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSVKDRDEVVGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G+G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 254 RVKVVKNKLAPPFKVVEFDIMYGEGVSKTGELVDLGVKAGVVEKSGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E K FL +N E+ + LR+
Sbjct: 314 ENAKLFLRDNPDTAREIELALRQN 337
>gi|188025341|ref|ZP_02958304.2| hypothetical protein PROSTU_00007 [Providencia stuartii ATCC 25827]
gi|188023876|gb|EDU61916.1| RecA protein [Providencia stuartii ATCC 25827]
Length = 366
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/339 (57%), Positives = 244/339 (71%), Gaps = 4/339 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LD+ALG GGLP GR+VE
Sbjct: 17 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDVALGAGGLPLGRIVE 75
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR G C FIDAEHALDP A+ +GV +NLL +QPD GE
Sbjct: 76 IYGPESSGKTTLTLQVIAAAQRSGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGE 135
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV++VDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 136 QALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 195
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK GEE +GS+
Sbjct: 196 NSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKNGEEIVGSE 253
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+ E+IDL +KHK KAGA ++YN D+ +G
Sbjct: 254 TRVKVVKNKVAAPFKQAEFQILYGEGINTYGELIDLGVKHKLIEKAGAWYSYNGDKIGQG 313
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTD 340
K +L E+ + EEL KLRE L+ E +A D
Sbjct: 314 KANATTYLKEHREIAEELDKKLREMLLTHTGEFSSAAAD 352
>gi|319899071|ref|YP_004159164.1| recombinase A [Bartonella clarridgeiae 73]
gi|319403035|emb|CBI76590.1| RecA protein [Bartonella clarridgeiae 73]
Length = 347
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/324 (59%), Positives = 239/324 (73%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI SFGKGSIM LG+ + VSTGS +LDIALG GGLPKGR++EI
Sbjct: 3 KTKALEAALSQIERSFGKGSIMRLGQKEQVVEIETVSTGSLSLDIALGVGGLPKGRIIEI 62
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH IAEAQ+ GG C FIDAEHALDP A +GV ENL ++QPD GEQ
Sbjct: 63 YGPESSGKTTLALHSIAEAQKNGGICAFIDAEHALDPIYARKLGVDLENLFISQPDTGEQ 122
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + +TL+RSG+VDV+VVDSVAAL P+ E+DGEMGDA +QARLMSQALRKL+ S+
Sbjct: 123 ALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDALPGLQARLMSQALRKLTASIFR 182
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K + IGSQ
Sbjct: 183 SNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAIKDRDTVIGSQT 240
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G+GIS+ E+IDL +K K+G+ F+YN + +G+
Sbjct: 241 RVKVVKNKLAPPFKQVEFDIIYGEGISKLGELIDLGVKVGLVEKSGSWFSYNSQRLGQGR 300
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E KQFL E + E+ LR+
Sbjct: 301 ENAKQFLREYAEIAAEIETALRQN 324
>gi|349699591|ref|ZP_08901220.1| DNA recombinase RecA [Gluconacetobacter europaeus LMG 18494]
Length = 348
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/343 (55%), Positives = 253/343 (73%), Gaps = 5/343 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI +FGKGSIM +G T V V+STGS LDIALG GGLP+GR++EI
Sbjct: 9 KSKALEGALSQIERAFGKGSIMRMGERPT-EQVDVISTGSLGLDIALGIGGLPRGRIIEI 67
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ALH IAEAQR+GG C FIDAEHALDP A +GV +NLL++QPD GEQ
Sbjct: 68 YGPESSGKTTMALHAIAEAQRKGGTCAFIDAEHALDPGYARKLGVDVDNLLISQPDAGEQ 127
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+VVDSVAALVP+ EL+G+MGD+H+ + ARLMSQALRKL+ S+S
Sbjct: 128 ALEIADTLVRSGAVDVLVVDSVAALVPRAELEGDMGDSHVGLHARLMSQALRKLTGSVSR 187
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T+LIF+NQ+R K+ FG P E T GGNALKFYASVR++I+RIG +K +E G+Q
Sbjct: 188 SNTMLIFLNQIRLKIGVM-FGSP-ETTTGGNALKFYASVRMDIRRIGSIKDKDEVTGNQT 245
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPF+ +F++ +G+GIS+ E+IDL +K K+GA F+ + + +G+
Sbjct: 246 RVKVVKNKMAPPFRQVEFDIMYGEGISKVGELIDLGVKAGIVEKSGAWFSCDSQRIGQGR 305
Query: 303 EAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTE 345
E KQFL ++ + ++ ++RE+ V E DED E
Sbjct: 306 ENAKQFLRDHPEMAADIERRVREQAGV-VAEAMLVGPDEDGAE 347
>gi|319407396|emb|CBI81047.1| RecA protein [Bartonella sp. 1-1C]
Length = 347
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 191/324 (58%), Positives = 240/324 (74%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI SFGKGSIM LG+ + VSTGS +LDIALG GGLPKGR++EI
Sbjct: 3 KTKALEAALSQIERSFGKGSIMRLGQKEQVVEIETVSTGSLSLDIALGVGGLPKGRIIEI 62
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH IAEAQ+ GG C F+DAEHALDP A +GV ENL ++QPD GEQ
Sbjct: 63 YGPESSGKTTLALHSIAEAQKNGGVCAFVDAEHALDPIYARKLGVDLENLFISQPDTGEQ 122
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + +TL+RSG+VDV+VVDSVAAL P+ E+DGEMGD+ +QARLMSQALRKL+ S+
Sbjct: 123 ALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDSLPGLQARLMSQALRKLTASIFR 182
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K + IGSQ
Sbjct: 183 SNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAIKDRDTIIGSQT 240
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VKIVKNKLAPPFK +F++ +G+GIS+ E+IDL +K K+G+ F+YN + +G+
Sbjct: 241 RVKIVKNKLAPPFKQVEFDIIYGEGISKLGELIDLGVKVGLVEKSGSWFSYNSQRLGQGR 300
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E KQFL E+ + E+ LR+
Sbjct: 301 ENAKQFLCEHTEIAAEIETALRQN 324
>gi|53802433|ref|YP_112918.1| recombinase A [Methylococcus capsulatus str. Bath]
gi|59798161|sp|Q60BS8.1|RECA_METCA RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|53756194|gb|AAU90485.1| recA protein [Methylococcus capsulatus str. Bath]
Length = 347
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 190/336 (56%), Positives = 245/336 (72%), Gaps = 3/336 (0%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGS+M +G R + V+ TGS ALDIALG GGLP+GR+VE
Sbjct: 4 NKRKALGAALSQIEKQFGKGSVMRMGDVAAVRDIDVIPTGSLALDIALGCGGLPRGRIVE 63
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA+AQ+ GG F+DAEHALDP AE IGV ++LL++QPD GE
Sbjct: 64 IYGPESSGKTTLTLEVIAQAQKTGGVAAFVDAEHALDPVYAEKIGVNLDDLLVSQPDTGE 123
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L+RSG VDVVV+DSVAAL PK EL+GEMGD+HM +QARLMSQALRKL+ ++
Sbjct: 124 QALEIADVLVRSGGVDVVVIDSVAALTPKAELEGEMGDSHMGLQARLMSQALRKLTANIK 183
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+R G +K G+E IG++
Sbjct: 184 RSNTLVIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRSGAIKNGDEVIGNE 241
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRG 301
VK+VKNK+APPF+TA FE+ +G+GISRE E+IDL + H K+G+ ++Y DR +G
Sbjct: 242 TRVKVVKNKVAPPFRTADFEILYGEGISREGELIDLGVNHDIVQKSGSWYSYGGDRIGQG 301
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTA 337
K+ + +L E+ V + +REK + + +A
Sbjct: 302 KDNVRIYLKEHPEVAAAIEAAVREKALAGFQHAPSA 337
>gi|337269281|ref|YP_004613336.1| recA protein [Mesorhizobium opportunistum WSM2075]
gi|433775682|ref|YP_007306149.1| protein RecA [Mesorhizobium australicum WSM2073]
gi|336029591|gb|AEH89242.1| recA protein [Mesorhizobium opportunistum WSM2075]
gi|433667697|gb|AGB46773.1| protein RecA [Mesorhizobium australicum WSM2073]
Length = 366
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 186/324 (57%), Positives = 241/324 (74%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI +FGKGSIM LG + + V TGS LDIALG GGLP+GR++EI
Sbjct: 16 KSKALDAALSQIERAFGKGSIMRLGANEQVVEIETVPTGSLGLDIALGVGGLPRGRIIEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH +AEAQ++GG C F+DAEHALDP A +GV ENLL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALHTVAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 136 ALEICDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISR 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK +E +G+Q
Sbjct: 196 SNTMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSVKDRDEVVGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G+G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 254 RVKVVKNKLAPPFKVVEFDIMYGEGVSKTGELVDLGVKAGVVEKSGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E K FL +N E+ + LR+
Sbjct: 314 ENAKLFLRDNPDTAREIELALRQN 337
>gi|156932777|ref|YP_001436693.1| recombinase A [Cronobacter sakazakii ATCC BAA-894]
gi|389839825|ref|YP_006341909.1| recombinase A [Cronobacter sakazakii ES15]
gi|417792178|ref|ZP_12439569.1| recombinase A [Cronobacter sakazakii E899]
gi|429115758|ref|ZP_19176676.1| RecA protein [Cronobacter sakazakii 701]
gi|449307104|ref|YP_007439460.1| recombinase A [Cronobacter sakazakii SP291]
gi|166220644|sp|A7MJ38.1|RECA_ENTS8 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|156531031|gb|ABU75857.1| hypothetical protein ESA_00567 [Cronobacter sakazakii ATCC BAA-894]
gi|333953742|gb|EGL71653.1| recombinase A [Cronobacter sakazakii E899]
gi|387850301|gb|AFJ98398.1| recombinase A [Cronobacter sakazakii ES15]
gi|426318887|emb|CCK02789.1| RecA protein [Cronobacter sakazakii 701]
gi|449097137|gb|AGE85171.1| recombinase A [Cronobacter sakazakii SP291]
Length = 354
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/348 (57%), Positives = 247/348 (70%), Gaps = 6/348 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG T V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRT-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR G C FIDAEHALDP A +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQRAGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV+VVDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALARSGAVDVLVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+GEE +GS+
Sbjct: 185 NSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKEGEEVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +KHK KAGA ++YN +G
Sbjct: 243 TRVKVVKNKVAAPFKQAEFQILYGEGINFYGELVDLGVKHKLIEKAGAWYSYNGEKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKE-PQTAVTDED-STEET 347
K FL EN+ + +E+ KLR+ L+ + P V D D EET
Sbjct: 303 KANATNFLKENKPMADEIEKKLRDMLLNNQDSTPDFTVDDNDGGVEET 350
>gi|92117166|ref|YP_576895.1| recombinase A [Nitrobacter hamburgensis X14]
gi|123083700|sp|Q1QMW2.1|RECA_NITHX RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|91800060|gb|ABE62435.1| RecA protein [Nitrobacter hamburgensis X14]
Length = 362
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 185/323 (57%), Positives = 246/323 (76%), Gaps = 3/323 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGS+M LG++ + V+S+GS LDIALG GGLPKGRVVEI
Sbjct: 16 KSKALSAALSQIERQFGKGSVMKLGKNDKSMDIEVISSGSLGLDIALGVGGLPKGRVVEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH +AEAQ++GG C FIDAEHALDP A +GVK ++LL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPIYARKLGVKVDDLLISQPDHGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+++DSVAALVP+ EL+GEMGDA +QARLMSQALRKL+ S++
Sbjct: 136 ALEIADTLVRSGAVDVLIIDSVAALVPRAELEGEMGDALPGLQARLMSQALRKLTASINK 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ +G P E T GGNALKFYASVRL+I+RIG +K+ +E +G+Q
Sbjct: 196 SNTMVIFINQIRMKIGVM-YGSP-ETTTGGNALKFYASVRLDIRRIGAIKERDEVVGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G+GIS+ EI+DL +K K+GA F+++ + +G+
Sbjct: 254 RVKVVKNKLAPPFKQVEFDIMYGEGISKMGEILDLGVKAGIVEKSGAWFSHDSQRMGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLRE 325
E K FL N + ++ + +R+
Sbjct: 314 ENAKAFLRANPDITAKIEVAIRQ 336
>gi|13470353|ref|NP_101919.1| recombinase A [Mesorhizobium loti MAFF303099]
gi|20178054|sp|Q98NQ6.1|RECA_RHILO RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|14021092|dbj|BAB47705.1| recombination protein; RecA [Mesorhizobium loti MAFF303099]
Length = 365
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 186/324 (57%), Positives = 241/324 (74%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI +FGKGSIM LG + + V TGS LDIALG GGLP+GR++EI
Sbjct: 16 KSKALDAALSQIERAFGKGSIMRLGANEQVVEIETVPTGSLGLDIALGVGGLPRGRIIEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH +AEAQ++GG C F+DAEHALDP A +GV ENLL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALHTVAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 136 ALEICDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISR 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK +E +G+Q
Sbjct: 196 SNTMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSVKDRDEVVGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G+G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 254 RVKVVKNKLAPPFKVVEFDIMYGEGVSKTGELVDLGVKAGVVEKSGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E K FL +N E+ + LR+
Sbjct: 314 ENAKLFLRDNPDTAREIELALRQN 337
>gi|312111602|ref|YP_003989918.1| recA protein [Geobacillus sp. Y4.1MC1]
gi|336235977|ref|YP_004588593.1| protein recA [Geobacillus thermoglucosidasius C56-YS93]
gi|423720522|ref|ZP_17694704.1| DNA recombination and repair protein (ATPase) recA [Geobacillus
thermoglucosidans TNO-09.020]
gi|311216703|gb|ADP75307.1| recA protein [Geobacillus sp. Y4.1MC1]
gi|335362832|gb|AEH48512.1| Protein recA [Geobacillus thermoglucosidasius C56-YS93]
gi|383366577|gb|EID43867.1| DNA recombination and repair protein (ATPase) recA [Geobacillus
thermoglucosidans TNO-09.020]
Length = 350
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 185/323 (57%), Positives = 243/323 (75%), Gaps = 4/323 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
+ AL+QAL QI FGKGSIM LG T R + VS+GS ALDIALG GG P+GR++EI
Sbjct: 5 RQAALEQALKQIERQFGKGSIMRLGEQ-TDRKISTVSSGSLALDIALGVGGYPRGRIIEI 63
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ALH IAE Q+QGG FIDAEHALDP A+ +GV + LLL+QPD GEQ
Sbjct: 64 YGPESSGKTTVALHAIAEVQKQGGQAAFIDAEHALDPIYAQKLGVNIDELLLSQPDTGEQ 123
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + + L+RSG+VD++V+DSVAALVPK E++GEMGDAH+ +QARLMSQALRKLS +++
Sbjct: 124 ALEIAEALVRSGAVDIIVIDSVAALVPKAEIEGEMGDAHVGLQARLMSQALRKLSGAINK 183
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+ I IFINQ+R K+ FG P E T GG ALKFYASVRL ++R +K+G E +G++
Sbjct: 184 SKAIAIFINQIREKVGVM-FGNP-ETTPGGRALKFYASVRLEVRRAEQIKQGNEMVGNKT 241
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
+K+VKNK+APPFKTA ++ +G+GISRE EIID+A + K+G+ ++Y D +G+
Sbjct: 242 KIKVVKNKVAPPFKTADVDIMYGEGISREGEIIDMASELDIVQKSGSWYSYKDERLGQGR 301
Query: 303 EAFKQFLVENESVREELVIKLRE 325
E KQFL EN + EE+ ++R+
Sbjct: 302 ENAKQFLKENPHIAEEIAQEIRK 324
>gi|325983480|ref|YP_004295882.1| recA protein [Nitrosomonas sp. AL212]
gi|325532999|gb|ADZ27720.1| recA protein [Nitrosomonas sp. AL212]
Length = 344
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/330 (57%), Positives = 242/330 (73%), Gaps = 4/330 (1%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL AL QI FGKGSIM LG + + VVSTGS LDIALG GGLP+GR+VEIYGP
Sbjct: 8 ALDVALAQIEKQFGKGSIMRLGANDVAYDIQVVSTGSLGLDIALGVGGLPRGRIVEIYGP 67
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTTL L VIAE Q+ GG FIDAEHALDP A+ IGV + LL++QPD GEQAL
Sbjct: 68 ESSGKTTLTLQVIAEMQKVGGTAAFIDAEHALDPQYAQKIGVNVKELLISQPDNGEQALE 127
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ D L+RSGSVD++V+DSVAAL P+ E++G+MGD M +QARLMSQALRKL+ ++ S T
Sbjct: 128 IADMLVRSGSVDIIVIDSVAALTPRAEIEGDMGDPQMGLQARLMSQALRKLTANIKRSNT 187
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+R G +KKG+ETIG++ VK
Sbjct: 188 MVIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRTGSIKKGDETIGNETRVK 245
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGKEAF 305
+VKNK+APPFK A F++ +G+GISRESEII+L + HK KAGA + Y +GK+
Sbjct: 246 VVKNKVAPPFKQADFDILYGEGISRESEIIELGVLHKLIDKAGAWYAYKGEKIGQGKDNV 305
Query: 306 KQFLVENESVREELVIKLREKL-VVDHKEP 334
+ +L E++ + E+ K+R + + D P
Sbjct: 306 RDYLKEHKDIALEIEQKIRSIVGIADQASP 335
>gi|381167306|ref|ZP_09876514.1| Recombinase A (recA) [Phaeospirillum molischianum DSM 120]
gi|380683614|emb|CCG41326.1| Recombinase A (recA) [Phaeospirillum molischianum DSM 120]
Length = 359
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 185/321 (57%), Positives = 244/321 (76%), Gaps = 3/321 (0%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL+ A+ QI +FGKGSIM LG+ V+STGS LD+ALG GG+P+GR++E+YGP
Sbjct: 19 ALEAAVSQIERAFGKGSIMKLGQKDQVVETEVISTGSLGLDVALGIGGVPRGRIIEVYGP 78
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTTLALH+IAEAQ++GG C FIDAEHALDP A +GV + LL++QPD GEQAL
Sbjct: 79 ESSGKTTLALHIIAEAQKKGGACAFIDAEHALDPGYARKLGVVLDELLISQPDAGEQALE 138
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+VDTL+RSG++DV+VVDSVAALVP+ EL+GEMGDAH+ + ARLMSQALRKL+ S+S S+T
Sbjct: 139 IVDTLVRSGAIDVLVVDSVAALVPRAELEGEMGDAHVGLHARLMSQALRKLTGSVSKSKT 198
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
I+IFINQ+R K+ FG P E T GGNALKFYASVR+ I+R+G +K +E +G+Q VK
Sbjct: 199 IVIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRMEIRRVGAIKDRDEVVGNQTRVK 256
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYND-RNFRGKEAF 305
+VKNKLAPPFK F++ +G+G+S+ E+IDL +K K+GA F+YN R +G+E
Sbjct: 257 VVKNKLAPPFKVVDFDIMYGEGVSKLGELIDLGVKAGVVEKSGAWFSYNSIRIGQGRENA 316
Query: 306 KQFLVENESVREELVIKLREK 326
K +L E+ V E+ +R+
Sbjct: 317 KNWLREHADVAAEIEGAIRQN 337
>gi|114330801|ref|YP_747023.1| recombinase A [Nitrosomonas eutropha C91]
gi|122314264|sp|Q0AHX4.1|RECA_NITEC RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|114307815|gb|ABI59058.1| RecA protein [Nitrosomonas eutropha C91]
Length = 343
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 185/322 (57%), Positives = 241/322 (74%), Gaps = 3/322 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K+ AL AL QI +GKGSIM LG S + + VVSTGS +LDIALG GGLP+GR++EI
Sbjct: 5 KNKALTAALAQIEKQYGKGSIMRLGDSDVAKDIQVVSTGSLSLDIALGVGGLPRGRIIEI 64
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIAE Q+ GG FIDAEHALDP A+ IGV + LL++QPD GEQ
Sbjct: 65 YGPESSGKTTLTLQVIAEMQKLGGTAAFIDAEHALDPQYAQKIGVNVQELLISQPDNGEQ 124
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RSGSVD+VV+DSVAAL P+ E++GEMG+ M +QARLMSQALRKL+ ++
Sbjct: 125 ALEITDMLVRSGSVDIVVIDSVAALTPRAEIEGEMGEPQMGLQARLMSQALRKLTANIKR 184
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
+ T +IFINQ+R K+ FG P E T GGNALKFYASVRL+I+R G +K+GEE +G++
Sbjct: 185 TNTTVIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRTGSIKRGEEIVGNET 242
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK A F + +G+GISRESEII+L + HK KAGA ++YN +G+
Sbjct: 243 RVKVVKNKVAPPFKQADFAILYGEGISRESEIIELGVLHKLIEKAGAWYSYNGEKIGQGR 302
Query: 303 EAFKQFLVENESVREELVIKLR 324
+ + +L E++ + E+ K+R
Sbjct: 303 DNVRDYLKEHKDLAHEIEQKIR 324
>gi|315127429|ref|YP_004069432.1| recombinase A [Pseudoalteromonas sp. SM9913]
gi|315015943|gb|ADT69281.1| RecA protein (recombinase A) [Pseudoalteromonas sp. SM9913]
Length = 347
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/327 (57%), Positives = 247/327 (75%), Gaps = 4/327 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGSIM LG + ++ VSTGS +DIALG GGLP GR+VE+
Sbjct: 5 KQKALDAALSQIERQFGKGSIMKLGDN-KALNIDAVSTGSLGIDIALGIGGLPMGRIVEV 63
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIAEAQ++G C F+DAEHALDP A+ +GV + LL++QPD GEQ
Sbjct: 64 YGPESSGKTTLTLQVIAEAQKEGKTCAFVDAEHALDPIYAQKLGVNIDELLVSQPDTGEQ 123
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RS +VDVV+VDSVAAL PK E++G+MGD+HM +QARLMSQALRKL+ ++
Sbjct: 124 ALEICDMLVRSSAVDVVIVDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTGNIKR 183
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T+ IFINQ+R K+ FG P E T GGNALKFYASVR++I+RIG VK+G+E +G++
Sbjct: 184 SNTLCIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRIDIRRIGSVKEGDEVVGNET 241
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGK 302
VKIVKNK+APPFK A+F + +G+GIS++ E+IDL +KHK KAGA ++YN ++ +GK
Sbjct: 242 RVKIVKNKVAPPFKQAEFIIMYGEGISKQGELIDLGVKHKLVEKAGAWYSYNGNKVGQGK 301
Query: 303 EAFKQFLVENESVREELVIKLREKLVV 329
+FL EN + +E+ KLRE L++
Sbjct: 302 SNSIKFLKENPEIADEIEGKLREMLLL 328
>gi|374332412|ref|YP_005082596.1| recombinase A [Pseudovibrio sp. FO-BEG1]
gi|359345200|gb|AEV38574.1| recombinase A [Pseudovibrio sp. FO-BEG1]
Length = 354
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 186/324 (57%), Positives = 244/324 (75%), Gaps = 4/324 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K+ AL AL QI +FGKGSIM +G+ + VSTGS +LDIALG GGLPKGR++E+
Sbjct: 16 KNKALDAALSQIERAFGKGSIMRMGQG-QAVEIQSVSTGSLSLDIALGIGGLPKGRIIEV 74
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH +A AQR GG C F+DAEHALDP A +GV ++LL++QPD GEQ
Sbjct: 75 YGPESSGKTTLALHTVASAQRDGGICAFVDAEHALDPVYARKLGVNIDDLLISQPDAGEQ 134
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+V+DSVAAL PK EL+GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 135 ALEIADTLVRSGAIDVLVIDSVAALTPKAELEGEMGDSLPGLQARLMSQALRKLTASISK 194
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K +E +G+Q
Sbjct: 195 SNTMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAIKDRDEIVGNQT 252
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G+GIS+ E++DL +K K+GA F+YN + +G+
Sbjct: 253 RVKVVKNKLAPPFKQVEFDIIYGEGISKMGELLDLGVKGGIVEKSGAWFSYNSQRLGQGR 312
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E K FL EN + EE+ + +R+
Sbjct: 313 ENSKTFLRENPELAEEIELAIRQN 336
>gi|386742557|ref|YP_006215736.1| recombinase A [Providencia stuartii MRSN 2154]
gi|384479250|gb|AFH93045.1| recombinase A [Providencia stuartii MRSN 2154]
Length = 355
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/339 (57%), Positives = 244/339 (71%), Gaps = 4/339 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LD+ALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDVALGAGGLPLGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR G C FIDAEHALDP A+ +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQRSGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV++VDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK GEE +GS+
Sbjct: 185 NSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKNGEEIVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+ E+IDL +KHK KAGA ++YN D+ +G
Sbjct: 243 TRVKVVKNKVAAPFKQAEFQILYGEGINTYGELIDLGVKHKLIEKAGAWYSYNGDKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTD 340
K +L E+ + EEL KLRE L+ E +A D
Sbjct: 303 KANATTYLKEHREIAEELDKKLREMLLTHTGEFSSAAAD 341
>gi|207366288|emb|CAQ58039.1| recombinase A [Agrobacterium tumefaciens]
gi|207366290|emb|CAQ58040.1| recombinase A [Agrobacterium tumefaciens]
Length = 323
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 188/321 (58%), Positives = 242/321 (75%), Gaps = 3/321 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI SFGKGSIM LG + V VSTGS +LDIALG GGLPKGR+VEI
Sbjct: 5 KSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGRIVEI 64
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL IAEAQ++GG C F+DAEHALDP A +GV ++LL++QPD GEQ
Sbjct: 65 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQSLLISQPDTGEQ 124
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 125 ALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 184
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+ ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+ EE +G+Q
Sbjct: 185 SKCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAVKEREEVVGNQT 242
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 243 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQGR 302
Query: 303 EAFKQFLVENESVREELVIKL 323
E K FL +N E+ + L
Sbjct: 303 ENAKTFLRDNPETANEIELAL 323
>gi|336450646|ref|ZP_08621093.1| protein RecA [Idiomarina sp. A28L]
gi|336282469|gb|EGN75701.1| protein RecA [Idiomarina sp. A28L]
Length = 350
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 191/331 (57%), Positives = 245/331 (74%), Gaps = 4/331 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKG+IM LG + V +STGS +LDIALG GGLP GRVVEI
Sbjct: 7 KQKALTAALGQIERQFGKGAIMRLGDN-RAMDVEAISTGSLSLDIALGIGGLPCGRVVEI 65
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
+GPE+SGKTTL L VIAEAQ+QG C F+DAEHALDP AE +GV LL++QPD GEQ
Sbjct: 66 FGPESSGKTTLTLQVIAEAQKQGKTCAFVDAEHALDPIYAENLGVNINELLVSQPDTGEQ 125
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RS +VDVV+VDSVAAL PK E++GEMGD+HM +QARLMSQALRKL+ ++
Sbjct: 126 ALEICDMLVRSAAVDVVIVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKLTANIKK 185
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+R G +K+G+E +G++
Sbjct: 186 SNTMVIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRTGALKEGDEIVGNET 243
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGK 302
VK+VKNK+APPFK A F++ +GKGIS+E E+IDL +KHK KAGA ++Y D+ +GK
Sbjct: 244 RVKVVKNKVAPPFKQADFQIMYGKGISKEGELIDLGVKHKLVEKAGAWYSYKGDKIGQGK 303
Query: 303 EAFKQFLVENESVREELVIKLREKLVVDHKE 333
+FL +N + E+ +LR+ L++ E
Sbjct: 304 ANSMKFLSDNSKIAVEIEQQLRDMLLLKPTE 334
>gi|254470359|ref|ZP_05083763.1| protein RecA [Pseudovibrio sp. JE062]
gi|211960670|gb|EEA95866.1| protein RecA [Pseudovibrio sp. JE062]
Length = 354
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 186/324 (57%), Positives = 244/324 (75%), Gaps = 4/324 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K+ AL AL QI +FGKGSIM +G+ + VSTGS +LDI LG GGLPKGR++EI
Sbjct: 16 KNKALDAALSQIERAFGKGSIMRMGQG-QAVEIQSVSTGSLSLDIGLGIGGLPKGRIIEI 74
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH +A AQR+GG C F+DAEHALDP A +GV ++LL++QPD GEQ
Sbjct: 75 YGPESSGKTTLALHTVASAQREGGICAFVDAEHALDPVYARKLGVNIDDLLISQPDAGEQ 134
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+V+DSVAAL PK EL+GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 135 ALEIADTLVRSGAIDVLVIDSVAALTPKAELEGEMGDSLPGLQARLMSQALRKLTASISK 194
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K +E +G+Q
Sbjct: 195 SNTMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAIKDRDEIVGNQT 252
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G+GIS+ E++DL +K K+GA F+YN + +G+
Sbjct: 253 RVKVVKNKLAPPFKQVEFDIIYGEGISKMGELLDLGVKGGIVEKSGAWFSYNSQRLGQGR 312
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E K FL EN + EE+ + +R+
Sbjct: 313 ENSKTFLRENPELAEEIELAIRQN 336
>gi|78044103|ref|YP_360011.1| recA protein [Carboxydothermus hydrogenoformans Z-2901]
gi|77996218|gb|ABB15117.1| recA protein [Carboxydothermus hydrogenoformans Z-2901]
Length = 343
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 181/329 (55%), Positives = 253/329 (76%), Gaps = 3/329 (0%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
M+ K AL+ + QI FGKGSIM LG + V V+ TGS ALD+ALG GG+P+GRV
Sbjct: 1 MNDKLKALELTISQIEKQFGKGSIMRLGENTGKFQVEVIPTGSLALDLALGVGGVPRGRV 60
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
VEI+GPE+SGKTT+ALH+IAEAQ+ GG FIDAEHALDP A+ +GV ENLL++QPD
Sbjct: 61 VEIFGPESSGKTTVALHIIAEAQKMGGIAAFIDAEHALDPVYAQKLGVDIENLLVSQPDT 120
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + ++L+RSG++DV+V+DSVAALVP+ E++GEMGDAH+ +QARLMSQALRKL+ +
Sbjct: 121 GEQALEIAESLVRSGAIDVIVIDSVAALVPRAEIEGEMGDAHVGLQARLMSQALRKLTGA 180
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
+S S+T+ IFINQ+R K+ FG P E T GG ALKFYAS+R+++++I ++K+G + IG
Sbjct: 181 ISKSKTVAIFINQMREKVGVM-FGNP-ETTPGGRALKFYASIRMDVRKIDVIKQGNDIIG 238
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF- 299
S+ VKIVKNK+APPFK A F++ +G+GIS+E ++D+A++ K K G+ ++YND
Sbjct: 239 SRTRVKIVKNKVAPPFKQADFDIMYGEGISKEGSLLDVAVELKIVQKVGSWYSYNDERLG 298
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLV 328
+G+E K+FL +N + E+ K+RE+++
Sbjct: 299 QGRENAKEFLRQNPEIYREIEQKIREQVL 327
>gi|357029345|ref|ZP_09091343.1| recombinase A [Mesorhizobium amorphae CCNWGS0123]
gi|355535264|gb|EHH04553.1| recombinase A [Mesorhizobium amorphae CCNWGS0123]
Length = 353
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 187/324 (57%), Positives = 241/324 (74%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI +FGKGSIM LG + + V TGS LDIALG GGLP+GR+VEI
Sbjct: 3 KSKALDAALSQIERAFGKGSIMRLGANEQVVEIETVPTGSLGLDIALGVGGLPRGRIVEI 62
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH +AEAQ++GG C F+DAEHALDP A +GV ENLL++QPD GEQ
Sbjct: 63 YGPESSGKTTLALHTVAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQ 122
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 123 ALEICDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISR 182
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK +E +G+Q
Sbjct: 183 SNTMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSVKDRDEVVGNQT 240
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G+G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 241 RVKVVKNKLAPPFKVVEFDIMYGEGVSKTGELVDLGVKAGVVEKSGAWFSYNSQRLGQGR 300
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E K FL +N E+ + LR+
Sbjct: 301 ENAKLFLRDNPDTAREIELALRQN 324
>gi|359436884|ref|ZP_09226963.1| recombination protein RecA [Pseudoalteromonas sp. BSi20311]
gi|359444316|ref|ZP_09234108.1| recombination protein RecA [Pseudoalteromonas sp. BSi20439]
gi|392553941|ref|ZP_10301078.1| recombinase A [Pseudoalteromonas undina NCIMB 2128]
gi|358028481|dbj|GAA63212.1| recombination protein RecA [Pseudoalteromonas sp. BSi20311]
gi|358041813|dbj|GAA70357.1| recombination protein RecA [Pseudoalteromonas sp. BSi20439]
Length = 347
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/327 (57%), Positives = 247/327 (75%), Gaps = 4/327 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGSIM LG + ++ VSTGS +DIALG GGLP GR+VE+
Sbjct: 5 KQKALDAALSQIERQFGKGSIMKLGDN-KALNIDAVSTGSLGIDIALGIGGLPMGRIVEV 63
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIAEAQ++G C F+DAEHALDP A+ +GV + LL++QPD GEQ
Sbjct: 64 YGPESSGKTTLTLQVIAEAQKEGKTCAFVDAEHALDPIYAQKLGVNIDELLVSQPDTGEQ 123
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RS +VDVV+VDSVAAL PK E++G+MGD+HM +QARLMSQALRKL+ ++
Sbjct: 124 ALEICDMLVRSSAVDVVIVDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTGNIKR 183
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T+ IFINQ+R K+ FG P E T GGNALKFYASVR++I+RIG VK+G+E +G++
Sbjct: 184 SNTLCIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRIDIRRIGSVKEGDEVVGNET 241
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGK 302
VKIVKNK+APPFK A+F + +G+GIS++ E+IDL +KHK KAGA ++YN ++ +GK
Sbjct: 242 RVKIVKNKVAPPFKQAEFIIMYGEGISKQGELIDLGVKHKIVEKAGAWYSYNGNKVGQGK 301
Query: 303 EAFKQFLVENESVREELVIKLREKLVV 329
+FL EN + +E+ KLRE L++
Sbjct: 302 SNSIKFLKENPEIADEIEGKLREMLLL 328
>gi|409202684|ref|ZP_11230887.1| recombinase A [Pseudoalteromonas flavipulchra JG1]
Length = 351
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 193/352 (54%), Positives = 251/352 (71%), Gaps = 9/352 (2%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGSIM LG + + +STGS LDIALG GGLP GR+VEI
Sbjct: 5 KQKALDAALSQIERQFGKGSIMKLGEN-KALDIEAISTGSLGLDIALGIGGLPTGRIVEI 63
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L IAEAQ+ G C F+DAEHALDP AE +GV + LL++QPD GEQ
Sbjct: 64 YGPESSGKTTLTLQAIAEAQKLGKTCAFVDAEHALDPIYAEKLGVNVDELLVSQPDTGEQ 123
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RSG+VD+VV+DSVAAL PK E++G+MGD+H+ +QARLMSQALRKL+ ++
Sbjct: 124 ALEICDMLVRSGAVDLVVIDSVAALTPKAEIEGDMGDSHVGLQARLMSQALRKLTANIKR 183
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T+ IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+G+E +G++
Sbjct: 184 SNTLCIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGSVKEGDEVVGNET 241
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK A+F + +G+G S++ E+IDL +KHK KAGA F+YN +GK
Sbjct: 242 RVKVVKNKVAPPFKQAEFIIMYGEGTSKQGELIDLGVKHKLVDKAGAWFSYNGNKIGQGK 301
Query: 303 EAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETVSTISPD 354
+FL EN + E+ KLRE L+ Q +T E+ ++ ++ + D
Sbjct: 302 ANSIKFLKENVEIANEIEGKLREMLLA-----QAVITPEEGEDKGLAEVEDD 348
>gi|359790738|ref|ZP_09293620.1| recombinase A [Mesorhizobium alhagi CCNWXJ12-2]
gi|359253328|gb|EHK56478.1| recombinase A [Mesorhizobium alhagi CCNWXJ12-2]
Length = 362
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 187/324 (57%), Positives = 241/324 (74%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI +FGKGSIM LG + + V TGS LDIALG GGLP+GR++EI
Sbjct: 16 KSKALDAALSQIERAFGKGSIMRLGANEKIVEIETVPTGSLGLDIALGVGGLPRGRIIEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH +AEAQ++GG C F+DAEHALDP A +GV ENLL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALHTVAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 136 ALEICDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISR 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK +E +G+Q
Sbjct: 196 SNTMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAVKDRDEVVGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G+G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 254 RVKVVKNKLAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGVVEKSGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E K FL +N E+ + LR+
Sbjct: 314 ENAKLFLRDNPDTAREIELALRQN 337
>gi|377577345|ref|ZP_09806328.1| RecA protein [Escherichia hermannii NBRC 105704]
gi|377541873|dbj|GAB51493.1| RecA protein [Escherichia hermannii NBRC 105704]
Length = 354
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/345 (55%), Positives = 249/345 (72%), Gaps = 4/345 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGSIM LG + V +STGS LDIALG GGLP GR+VEI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLTLDIALGAGGLPMGRIVEI 65
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L V+A AQR+G C FIDAEHALDP A +GV +NLL +QPD GEQ
Sbjct: 66 YGPESSGKTTLTLQVVAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGEQ 125
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L RSG+VDV++VDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 126 ALEICDALARSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLKQ 185
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+G+E +GS+
Sbjct: 186 SNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKEGDEVVGSET 243
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGK 302
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +KHK KAGA ++YN ++ +GK
Sbjct: 244 RVKVVKNKIAAPFKQAEFQILYGEGINFYGELVDLGVKHKLIEKAGAWYSYNGEKVGQGK 303
Query: 303 EAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEET 347
FL EN ++ +E+ KLRE+L+ + + DE +E+
Sbjct: 304 ANATNFLKENTAIAQEIEKKLREQLLHNQDDKPAFSVDEYEKDES 348
>gi|114328048|ref|YP_745205.1| recombinase A [Granulibacter bethesdensis CGDNIH1]
gi|84620800|gb|ABC59514.1| RecA [Granulibacter bethesdensis CGDNIH1]
gi|114316222|gb|ABI62282.1| recA protein [Granulibacter bethesdensis CGDNIH1]
Length = 351
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 182/325 (56%), Positives = 245/325 (75%), Gaps = 3/325 (0%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
+K+ AL AL QI SFGKGSIM +G + V+ +GS LD+ALG GG+P+GR+VE
Sbjct: 8 EKNKALDAALAQIERSFGKGSIMRMGARNVAEQIEVIPSGSLGLDLALGIGGMPRGRIVE 67
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTLALH +AEAQ++GG C F+DAEHALDP A +GV +NLL++QPD GE
Sbjct: 68 IYGPESSGKTTLALHTVAEAQKRGGTCAFVDAEHALDPIYARKLGVDVDNLLISQPDAGE 127
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + DTL+RSG++DV+VVDSVAALVP+ EL+GEMGD+H+ + ARLMSQALRKL+ S++
Sbjct: 128 QALEIADTLVRSGAIDVLVVDSVAALVPRAELEGEMGDSHVGLHARLMSQALRKLTGSVN 187
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T LIF+NQ+R K+ FG P E T GGNALKFYASVR +I+RIG +K EE IG+Q
Sbjct: 188 RSNTTLIFLNQIRMKIGVM-FGSP-ETTTGGNALKFYASVRFDIRRIGQLKDKEEVIGNQ 245
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK+VKNKLAPPF+ +F++ +G+GIS+ E+IDL +K K+GA ++Y+ + +G
Sbjct: 246 TRVKVVKNKLAPPFRQVEFDIIYGEGISKVGELIDLGVKANVVEKSGAWYSYDSQRIGQG 305
Query: 302 KEAFKQFLVENESVREELVIKLREK 326
+E KQFL ++ + + ++RE+
Sbjct: 306 RENAKQFLRDHPEIANAIENRIREQ 330
>gi|251788612|ref|YP_003003333.1| recA protein [Dickeya zeae Ech1591]
gi|247537233|gb|ACT05854.1| recA protein [Dickeya zeae Ech1591]
Length = 358
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 201/364 (55%), Positives = 257/364 (70%), Gaps = 17/364 (4%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGVGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A+ +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV++VDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALARSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+GEE +GS+
Sbjct: 185 QSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGSIKEGEEVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +K+K KAGA ++YN D+ +G
Sbjct: 243 TRVKVVKNKVAAPFKQAEFQILYGEGINTFGELVDLGVKYKLIEKAGAWYSYNGDKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETVSTISPDSTDEEAA 361
K FL EN ++ EL KLRE L+ HK+ + V TIS +S + + A
Sbjct: 303 KANACNFLKENPAISAELDKKLRELLL--HKD-----------NDAVPTISSESAEYDEA 349
Query: 362 AVVE 365
A E
Sbjct: 350 AAGE 353
>gi|585797|sp|Q08327.1|RECA_ACEPO RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|300185|gb|AAC60438.1| RecA [Gluconacetobacter polyoxogenes]
gi|391592|dbj|BAA02478.1| RecA protein [Gluconacetobacter polyoxogenes]
Length = 348
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/343 (55%), Positives = 253/343 (73%), Gaps = 5/343 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI +FGKGSIM +G T V V+STGS LDIALG GGLP+GR++EI
Sbjct: 9 KSKALEGALSQIERAFGKGSIMRMGERPT-EQVDVISTGSLGLDIALGIGGLPRGRIIEI 67
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ALH IAEAQR+GG C FIDAEHALDP A +GV +NLL++QPD GEQ
Sbjct: 68 YGPESSGKTTMALHAIAEAQRKGGTCAFIDAEHALDPGYARKLGVDVDNLLISQPDAGEQ 127
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+VVDSVAALVP+ EL+G+MGD+H+ + ARLMSQALRKL+ S+S
Sbjct: 128 ALEIADTLVRSGAVDVLVVDSVAALVPRAELEGDMGDSHVGLHARLMSQALRKLTGSVSR 187
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T+LIF+NQ+R K+ FG P E T GGNALKFYASVR++I+RIG +K +E G+Q
Sbjct: 188 SNTMLIFLNQIRLKIGVM-FGSP-ESTTGGNALKFYASVRMDIRRIGSIKDKDEVTGNQT 245
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPF+ +F++ +G+GIS+ E+IDL +K K+GA F+ + + +G+
Sbjct: 246 RVKVVKNKMAPPFRQVEFDIMYGEGISKVGELIDLGVKAGIVEKSGAWFSCDSQRIGQGR 305
Query: 303 EAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTE 345
E KQFL ++ + ++ ++RE+ V E DED E
Sbjct: 306 ENAKQFLRDHPEMAADIERRVREQAGV-VAEAMLVGPDEDGAE 347
>gi|328543179|ref|YP_004303288.1| recombinase A [Polymorphum gilvum SL003B-26A1]
gi|326412925|gb|ADZ69988.1| recombinase A [Polymorphum gilvum SL003B-26A1]
Length = 344
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/346 (56%), Positives = 251/346 (72%), Gaps = 12/346 (3%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI +FGKGSIM LG+ V VSTGS LDIALG GGLP+GR+VEI
Sbjct: 3 KTKALDAALSQIERAFGKGSIMRLGQG-QAVEVQTVSTGSLGLDIALGVGGLPRGRIVEI 61
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH IAEAQ+ GG C FIDAEHALDP A +GV ++LL++QPD GEQ
Sbjct: 62 YGPESSGKTTLALHTIAEAQKLGGICAFIDAEHALDPVYARKLGVNIDDLLISQPDAGEQ 121
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+++V+V+DSVAAL PK EL+GEMGD+ MQARLMSQALRKL+ S+S
Sbjct: 122 ALEIADTLVRSGAIEVLVIDSVAALTPKAELEGEMGDSLPGMQARLMSQALRKLTASISK 181
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K +E IG+Q
Sbjct: 182 SNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKDRDEVIGNQT 239
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPF+ +F++ +G+G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 240 RVKVVKNKLAPPFRQVEFDVIYGEGVSKMGELVDLGVKAGIVEKSGAWFSYNSQRLGQGR 299
Query: 303 EAFKQFLVENESVREELVIKLREK--LVVDHKEPQTAVTDEDSTEE 346
E KQFL EN + E+ + +R+ L+ D A+ D D +E
Sbjct: 300 ENAKQFLRENPEIAAEIELAIRQNAGLLSD------AIIDPDGVDE 339
>gi|339018114|ref|ZP_08644256.1| DNA recombinase RecA [Acetobacter tropicalis NBRC 101654]
gi|338752779|dbj|GAA07560.1| DNA recombinase RecA [Acetobacter tropicalis NBRC 101654]
Length = 340
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 185/321 (57%), Positives = 248/321 (77%), Gaps = 6/321 (1%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPR-HVPVVSTGSFALDIALGTGGLPKGRVVEIYG 65
AL+ AL QI +FGKGS+M LG+ PR V+ TGS LDIALG GGLP+GRV+EIYG
Sbjct: 6 ALEGALGQIERAFGKGSVMRLGQR--PREQADVIPTGSLGLDIALGIGGLPRGRVIEIYG 63
Query: 66 PEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQAL 125
PE+SGKTTLALH IAEAQ++GG C FIDAEHALDP A+ +GV +NLL++QPD GEQAL
Sbjct: 64 PESSGKTTLALHAIAEAQKRGGTCAFIDAEHALDPGYAKKLGVDVDNLLISQPDAGEQAL 123
Query: 126 SLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQ 185
+ DTL+RSG++DV+VVDSVAALVP+ EL+G+MGD+H+ + ARLMSQALRKL+ S+S S
Sbjct: 124 EIADTLVRSGAIDVLVVDSVAALVPRAELEGDMGDSHVGLHARLMSQALRKLTGSVSRSN 183
Query: 186 TILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAV 245
T++IF+NQ+R K+ FG P E T GGNALKFYASVRL+I+R+G +K +E +G+Q V
Sbjct: 184 TMMIFLNQIRLKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRVGSIKDKDEVVGNQTRV 241
Query: 246 KIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGKEA 304
K+VKNK+APPF+ +F++ +G+GIS+ E+IDL +K K+GA F+Y+ + +G+E
Sbjct: 242 KVVKNKMAPPFRQVEFDIMYGEGISKVGELIDLGVKAGVVEKSGAWFSYDSQRIGQGREN 301
Query: 305 FKQFLVENESVREELVIKLRE 325
KQFL ++ + ++ K+RE
Sbjct: 302 SKQFLRDHPEMAADIERKVRE 322
>gi|83647897|ref|YP_436332.1| recombinase A [Hahella chejuensis KCTC 2396]
gi|123739862|sp|Q2SBR7.1|RECA_HAHCH RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|83635940|gb|ABC31907.1| recA protein [Hahella chejuensis KCTC 2396]
Length = 345
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/339 (55%), Positives = 250/339 (73%), Gaps = 11/339 (3%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHV-PVVSTGSFALDIALGTGGLPKGRVVEIYG 65
AL AL QI FGKG++M +G PR + P VSTGS LDIALG GGLP GR+VEIYG
Sbjct: 8 ALTAALSQIERQFGKGAVMRMGEQ--PREIIPSVSTGSLGLDIALGIGGLPYGRIVEIYG 65
Query: 66 PEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQAL 125
PE+SGKTTL L VIAEAQRQG C F+DAEHALDP AE +GV + LL++QPD GEQAL
Sbjct: 66 PESSGKTTLTLQVIAEAQRQGKTCAFVDAEHALDPIYAEKLGVNIDQLLVSQPDTGEQAL 125
Query: 126 SLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQ 185
+ D L+RSG+VDV+++DSVAAL PK E++GEMGD+H+ +QARLMSQALRKL+ S+ +
Sbjct: 126 EIADMLVRSGAVDVIIIDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTGSVKQAN 185
Query: 186 TILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAV 245
++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+R+G VK+GEE +G++ V
Sbjct: 186 CLMIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRVGSVKEGEEVVGNETRV 243
Query: 246 KIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGKEA 304
K+VKNK++PPFK A F++ +G+GI R EIIDL +K F K+GA ++Y D+ +GK
Sbjct: 244 KVVKNKVSPPFKQADFQIMYGRGIYRTGEIIDLGVKEGFVDKSGAWYSYKGDKIGQGKAN 303
Query: 305 FKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDS 343
++L E+ + E+ +REKL+ P+T V ++++
Sbjct: 304 SSRYLEEHPEIAVEIETAIREKLM-----PKTPVKEKEA 337
>gi|148260042|ref|YP_001234169.1| recombinase A [Acidiphilium cryptum JF-5]
gi|326403005|ref|YP_004283086.1| recombinase A [Acidiphilium multivorum AIU301]
gi|338988950|ref|ZP_08633843.1| Protein recA [Acidiphilium sp. PM]
gi|189039588|sp|A5FXB8.1|RECA_ACICJ RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|146401723|gb|ABQ30250.1| recA protein [Acidiphilium cryptum JF-5]
gi|325049866|dbj|BAJ80204.1| recombinase A [Acidiphilium multivorum AIU301]
gi|338206126|gb|EGO94369.1| Protein recA [Acidiphilium sp. PM]
Length = 343
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 187/344 (54%), Positives = 253/344 (73%), Gaps = 6/344 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
+K+ AL AL QI +FGKGSIM +G + V+STGS LD+ALG GGLP+GRV+E
Sbjct: 2 EKNKALDAALAQIERAFGKGSIMRMGSRSESEAIDVISTGSLGLDLALGIGGLPRGRVIE 61
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTLALH +AEAQ++GG C F+DAEHALDP A +GV +NLL++QPD GE
Sbjct: 62 IYGPESSGKTTLALHAVAEAQKRGGTCAFVDAEHALDPIYARKLGVDVDNLLISQPDTGE 121
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + DTL+RSG++DV+VVDSVAALVP+ EL+GEMGD+H+ + ARLMSQALRKL+ S+S
Sbjct: 122 QALEIADTLVRSGAIDVLVVDSVAALVPRAELEGEMGDSHVGLHARLMSQALRKLTGSIS 181
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S+T++IF+NQ+R K+ FG P E T GGNALKFYAS+R++I+RIG +K EE G+Q
Sbjct: 182 RSKTLVIFLNQIRLKIGVM-FGNP-ETTTGGNALKFYASIRMDIRRIGSIKDREEVTGNQ 239
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK+VKNKLAPPF+ +F++ +G+GIS+ E++DL +K K+GA F+ + + +G
Sbjct: 240 TRVKVVKNKLAPPFRQVEFDIMYGEGISKVGELLDLGVKAGIVEKSGAWFSCDSQRIGQG 299
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTE 345
+E KQFL +N V + ++R + + +TDE TE
Sbjct: 300 RENAKQFLRDNPDVAASIEQRIRAQA---NLVEAAMITDETETE 340
>gi|238798515|ref|ZP_04641993.1| hypothetical protein ymoll0001_9180 [Yersinia mollaretii ATCC
43969]
gi|238717602|gb|EEQ09440.1| hypothetical protein ymoll0001_9180 [Yersinia mollaretii ATCC
43969]
Length = 354
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/348 (56%), Positives = 249/348 (71%), Gaps = 6/348 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR G C FIDAEHALDP A+ +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQRAGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV++VDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK G+ +GS+
Sbjct: 185 NANTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKDGDVVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +KHK KAGA ++YN D+ +G
Sbjct: 243 TRVKVVKNKIAAPFKQAEFQILYGEGININGELVDLGVKHKLIEKAGAWYSYNGDKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVV--DHKEPQTAVTDEDSTEET 347
K +L EN +V EL KLRE L+ + ++P T D T+ET
Sbjct: 303 KANASNYLKENPAVAAELDKKLREMLLNGGNGEQPVATATVADETDET 350
>gi|433463722|ref|ZP_20421264.1| recombinase A [Halobacillus sp. BAB-2008]
gi|432187164|gb|ELK44491.1| recombinase A [Halobacillus sp. BAB-2008]
Length = 347
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 190/346 (54%), Positives = 249/346 (71%), Gaps = 4/346 (1%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
MS + AL AL QI FGKGSIM LG S R V VS+GS ALD+ALG GG P+GR+
Sbjct: 1 MSDRKQALDMALRQIEKQFGKGSIMKLGESAEQR-VNTVSSGSLALDVALGVGGYPRGRI 59
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+EIYGPE+SGKTT+ALH IAEAQR+GG FIDAEHALDP A +GV E LLL+QPD
Sbjct: 60 IEIYGPESSGKTTVALHAIAEAQRKGGQAAFIDAEHALDPVYARALGVDIEELLLSQPDT 119
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + + L+RSG+VD+VV+DSVAALVPK E++GEMGDAH+ +QARLMSQALRKLS +
Sbjct: 120 GEQALEIAEALVRSGAVDMVVIDSVAALVPKAEIEGEMGDAHVGLQARLMSQALRKLSGA 179
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
++ S+T IFINQ+R K+ FG P E T GG ALKFY+SVRL ++R +K+G E +G
Sbjct: 180 INKSKTTAIFINQIREKVGVM-FGNP-ETTPGGRALKFYSSVRLEVRRAETLKQGNEMVG 237
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF- 299
++ +K+VKNK+APPFK A+ ++ +G+GISRE E+ID+ K+G+ ++YN+
Sbjct: 238 NKTRLKVVKNKVAPPFKQAEVDIMYGEGISREGELIDIGTDLDLIQKSGSWYSYNEERLG 297
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTE 345
+G+E KQFL EN + +E+ +R+ +D EP + DS E
Sbjct: 298 QGRENAKQFLKENVEIYDEVKRLIRDHYGMDADEPSVEAPEADSQE 343
>gi|196247558|ref|ZP_03146260.1| recA protein [Geobacillus sp. G11MC16]
gi|196212342|gb|EDY07099.1| recA protein [Geobacillus sp. G11MC16]
Length = 346
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 186/339 (54%), Positives = 247/339 (72%), Gaps = 4/339 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
+ AL+QAL QI FGKG+IM LG R + V +GS ALDIALG GG P+GR++EI
Sbjct: 5 RQAALEQALKQIERQFGKGAIMKLGEQAE-RQISTVPSGSLALDIALGVGGYPRGRIIEI 63
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ALH IAE Q+QGG FIDAEHALDP A+ +GV + LLL+QPD GEQ
Sbjct: 64 YGPESSGKTTVALHAIAEVQKQGGQAAFIDAEHALDPIYAQKLGVNIDELLLSQPDTGEQ 123
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + + L+RSG+VD++V+DSVAALVPK E++GEMGDAH+ +QARLMSQALRKLS +++
Sbjct: 124 ALEIAEALVRSGAVDIIVIDSVAALVPKAEIEGEMGDAHVGLQARLMSQALRKLSGAINK 183
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+TI IFINQ+R K+ FG P E T GG ALKFYASVRL ++R +K+G + +G++
Sbjct: 184 SKTIAIFINQIREKVGVM-FGNP-ETTPGGRALKFYASVRLEVRRAEQIKQGNDMVGNKT 241
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
+K+VKNK+APPFKTA ++ +G+GISRE EIID+A + K+G+ ++Y D +G+
Sbjct: 242 KIKVVKNKVAPPFKTADVDIMYGEGISREGEIIDMAAELDIVQKSGSWYSYKDERLGQGR 301
Query: 303 EAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDE 341
E KQFL EN + EE+ +R+ +D E + DE
Sbjct: 302 ENAKQFLKENPHIAEEIARAIRKHYGIDAGEAGEPLQDE 340
>gi|207366278|emb|CAQ58034.1| recombinase A [Agrobacterium tumefaciens]
gi|207366342|emb|CAQ58066.1| recombinase A [Agrobacterium tumefaciens]
gi|207366344|emb|CAQ58067.1| recombinase A [Agrobacterium tumefaciens]
gi|255287394|emb|CAQ58036.2| recombinase A [Agrobacterium tumefaciens]
gi|444299282|emb|CCP29590.1| recombinase A, partial [Agrobacterium genomosp. 7]
gi|444299290|emb|CCP29594.1| recombinase A, partial [Agrobacterium genomosp. 9]
Length = 323
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 187/321 (58%), Positives = 242/321 (75%), Gaps = 3/321 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI SFGKGSIM LG + V VSTGS +LDIALG GGLPKGR++EI
Sbjct: 5 KSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGRIIEI 64
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL IAEAQ++GG C F+DAEHALDP A +GV ++LL++QPD GEQ
Sbjct: 65 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQSLLISQPDTGEQ 124
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 125 ALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 184
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+ ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+ EE +G+Q
Sbjct: 185 SKCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAVKEREEVVGNQT 242
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 243 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQGR 302
Query: 303 EAFKQFLVENESVREELVIKL 323
E K FL +N E+ + L
Sbjct: 303 ENAKTFLRDNPDTANEIELAL 323
>gi|145600309|ref|YP_001164385.1| recombinase A [Yersinia pestis Pestoides F]
gi|166220693|sp|A4TQ50.1|RECA_YERPP RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|145212005|gb|ABP41412.1| RecA protein [Yersinia pestis Pestoides F]
Length = 356
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 197/350 (56%), Positives = 252/350 (72%), Gaps = 8/350 (2%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTLAL VIA AQR+G C FIDAEHALDP A+ +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLALQVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV++VDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK G+ +GS+
Sbjct: 185 NANTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKDGDVVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +KHK KAGA ++YN D+ +G
Sbjct: 243 TRVKVVKNKIAAPFKQAEFQILYGEGININGELVDLGVKHKLIEKAGAWYSYNGDKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVV--DHKEPQTAVTDE--DSTEET 347
K +L EN ++ EL KLRE L+ + ++P A T E D +ET
Sbjct: 303 KANASNYLKENPAIAAELDKKLREMLLNGGNGEQPVAAATAEFADGADET 352
>gi|317121901|ref|YP_004101904.1| recombinase A [Thermaerobacter marianensis DSM 12885]
gi|315591881|gb|ADU51177.1| RecA protein [Thermaerobacter marianensis DSM 12885]
Length = 340
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 187/342 (54%), Positives = 257/342 (75%), Gaps = 3/342 (0%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
M +++ AL+ AL QI FGKGSIM +G + + +V V+ TGS ALDIALG GG+P+GR+
Sbjct: 1 MIERERALEIALSQIEKQFGKGSIMRMGEASSRLNVEVIPTGSLALDIALGVGGMPRGRI 60
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+EI+GPEASGKTT+ALHV A AQR GG FIDAEHALDP AE +GV NLL++QPD
Sbjct: 61 IEIFGPEASGKTTVALHVAASAQRAGGVAAFIDAEHALDPVYAENLGVDINNLLISQPDT 120
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + + L+RSG+VDV+V+DSVAALVP+ E++GEMGDAH+ +QARLMSQALRKL+ +
Sbjct: 121 GEQALEIAEALVRSGAVDVIVIDSVAALVPRAEIEGEMGDAHVGLQARLMSQALRKLTGA 180
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
++ S+T LIFINQ+R K+ FG P EVT GG ALKFYASVRL+++R+ +K+G E IG
Sbjct: 181 IAKSRTCLIFINQIREKVGVM-FGNP-EVTPGGRALKFYASVRLDVRRVETLKQGGEMIG 238
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYND-RNF 299
+ K+VKNK+APPF+ A+F+L +GKGISRE +++D+A +H K+GA ++Y D R
Sbjct: 239 IRARAKVVKNKVAPPFRQAEFDLIYGKGISREGDLLDIATQHGIIEKSGAWYSYGDTRIG 298
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDE 341
+G+E +++LV++ V + + ++RE L + TA +E
Sbjct: 299 QGRENAREYLVQHPEVADAIEQRVRELLSLGGIRAATASEEE 340
>gi|349686592|ref|ZP_08897734.1| DNA recombinase RecA [Gluconacetobacter oboediens 174Bp2]
Length = 348
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 191/343 (55%), Positives = 253/343 (73%), Gaps = 5/343 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI +FGKGSIM +G T V V+STGS LDIALG GGLP+GR++EI
Sbjct: 9 KSKALEGALSQIERAFGKGSIMRMGERPT-EQVDVISTGSLGLDIALGIGGLPRGRIIEI 67
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ALH IAEAQR+GG C FIDAEHALDP A +GV +NLL++QPD GEQ
Sbjct: 68 YGPESSGKTTMALHAIAEAQRKGGTCAFIDAEHALDPGYARKLGVDVDNLLISQPDAGEQ 127
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+VVDSVAALVP+ EL+G+MGD+H+ + ARLMSQALRKL+ S+S
Sbjct: 128 ALEIADTLVRSGAIDVLVVDSVAALVPRAELEGDMGDSHVGLHARLMSQALRKLTGSVSR 187
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T+LIF+NQ+R K+ FG P E T GGNALKFYASVR++I+RIG +K +E G+Q
Sbjct: 188 SNTMLIFLNQIRLKIGVM-FGSP-ETTTGGNALKFYASVRMDIRRIGSIKDKDEVTGNQT 245
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPF+ +F++ +G+GIS+ E+IDL +K K+GA F+ + + +G+
Sbjct: 246 RVKVVKNKMAPPFRQVEFDIMYGEGISKVGELIDLGVKAGIVEKSGAWFSCDSQRIGQGR 305
Query: 303 EAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTE 345
E KQFL ++ + ++ ++RE+ V E DED E
Sbjct: 306 ENAKQFLRDHPEMAADIERRVREQAGV-VAEAMLVGPDEDGAE 347
>gi|407699113|ref|YP_006823900.1| recombinase A [Alteromonas macleodii str. 'Black Sea 11']
gi|407248260|gb|AFT77445.1| recombinase A [Alteromonas macleodii str. 'Black Sea 11']
Length = 348
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 187/327 (57%), Positives = 246/327 (75%), Gaps = 4/327 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL A+ QI FGKG+IM LG + + +STGS +DIALG GGLP GRVVEI
Sbjct: 5 KSKALTAAVGQIEKQFGKGAIMRLGDN-QAMDIEAISTGSLTIDIALGIGGLPCGRVVEI 63
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIAEAQ++G C F+DAEHALDP AE +GV + LL++QPD GEQ
Sbjct: 64 YGPESSGKTTLTLQVIAEAQKKGKTCAFVDAEHALDPVYAEKLGVNIDELLVSQPDTGEQ 123
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RSG+VDVV+VDSVAAL PK E++G+MGD+H+ +QARLMSQALRKL+ ++
Sbjct: 124 ALEICDMLVRSGAVDVVIVDSVAALTPKAEIEGDMGDSHVGLQARLMSQALRKLTGNIKR 183
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T+ IFINQ+R K+ FG P E T GGNALKFY+SVRL+I+RIG VK+G+E +G++
Sbjct: 184 SNTLCIFINQIRMKIGVM-FGNP-ETTTGGNALKFYSSVRLDIRRIGAVKEGDEVVGNET 241
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGK 302
VK+VKNK+APPFK A+F + +G+GIS+E+E+IDL +K K KAGA ++Y DR +GK
Sbjct: 242 RVKVVKNKVAPPFKQAEFMIRYGEGISKEAELIDLGVKQKLVDKAGAWYSYKGDRIGQGK 301
Query: 303 EAFKQFLVENESVREELVIKLREKLVV 329
+FL EN + E+ K+R++L++
Sbjct: 302 ANVMKFLKENPEIANEIETKIRQELLL 328
>gi|372267657|ref|ZP_09503705.1| recombinase A [Alteromonas sp. S89]
Length = 343
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 191/345 (55%), Positives = 254/345 (73%), Gaps = 9/345 (2%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVV 61
S KD ALQ AL QI FGKG++M +G R +P +STGS LD+ALG GGLP+GR+V
Sbjct: 3 SNKDKALQAALSQIERQFGKGTVMRMGDKERER-IPAISTGSLGLDVALGIGGLPRGRIV 61
Query: 62 EIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCG 121
EIYGPE+SGKTTL L VIAEAQR+GG C F+DAEHALDP AE +GV + L+++QPD G
Sbjct: 62 EIYGPESSGKTTLTLQVIAEAQRKGGTCAFVDAEHALDPIYAEKLGVNVDELIVSQPDTG 121
Query: 122 EQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSL 181
EQAL + D L+RSG+VDV++VDSVAAL P+ E++GEMGD+H+ +QARLMSQALRKL+ ++
Sbjct: 122 EQALEVADMLVRSGAVDVLIVDSVAALTPRAEIEGEMGDSHVGLQARLMSQALRKLTGNI 181
Query: 182 SLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGS 241
+ T+ +FINQ+R K+ FG P E T GGNALKFY+SVRL+I+RIG VK+G+E +G+
Sbjct: 182 KNTNTLCVFINQIRMKIGVM-FGSP-ETTTGGNALKFYSSVRLDIRRIGSVKEGDEVVGN 239
Query: 242 QIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFR 300
+ VK+VKNK+APPFK +F++ +G+GI+ EIID +K KAGA ++Y D+ +
Sbjct: 240 ETRVKVVKNKVAPPFKQTEFQIMYGQGINLIGEIIDYGVKLGLVDKAGAWYSYKGDKIGQ 299
Query: 301 GKEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTE 345
GK +FL EN +R E+ +LR +L+ D T VT ED+ E
Sbjct: 300 GKANAVKFLKENVDIRNEIEGQLRAQLLGD----MTPVT-EDAEE 339
>gi|372275053|ref|ZP_09511089.1| recombinase A [Pantoea sp. SL1_M5]
gi|390437365|ref|ZP_10225903.1| recombinase A [Pantoea agglomerans IG1]
Length = 355
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 190/327 (58%), Positives = 242/327 (74%), Gaps = 4/327 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A+ +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIASAQRKGKTCAFIDAEHALDPVYAKKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV++VDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALARSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+G+ +GS+
Sbjct: 185 QSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAIKEGDNVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +KHK KAGA ++YN D+ +G
Sbjct: 243 TRVKVVKNKIAAPFKQAEFQIMYGEGINTFGELVDLGVKHKLIEKAGAWYSYNGDKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLV 328
K FL EN +V E+ +KLRE L+
Sbjct: 303 KSNAGNFLKENAAVANEIDLKLREMLL 329
>gi|261346226|ref|ZP_05973870.1| protein RecA [Providencia rustigianii DSM 4541]
gi|282565534|gb|EFB71069.1| protein RecA [Providencia rustigianii DSM 4541]
Length = 355
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 198/349 (56%), Positives = 247/349 (70%), Gaps = 7/349 (2%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG T V +STGS +LD+ALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRT-MDVETISTGSLSLDVALGAGGLPLGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR G C FIDAEHALDP A+ +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIASAQRSGKTCAFIDAEHALDPVYAKKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV++VDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK GEE +GS+
Sbjct: 185 NSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKNGEEIVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+ E+IDL +KHK KAGA ++YN D+ +G
Sbjct: 243 TRVKVVKNKVAAPFKQAEFQILYGEGINTFGELIDLGVKHKLIEKAGAWYSYNGDKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTD---EDSTEET 347
K +L E+ V +E+ KLRE L+ E TD + EET
Sbjct: 303 KANSTTYLKEHPDVAKEIDTKLREMLLSHTGELSNTTTDFVSDSDVEET 351
>gi|207366318|emb|CAQ58054.1| recombinase A [Agrobacterium tumefaciens]
gi|207366320|emb|CAQ58055.1| recombinase A [Agrobacterium tumefaciens]
Length = 323
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 188/321 (58%), Positives = 241/321 (75%), Gaps = 3/321 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI SFGKGSIM LG + V VSTGS +LDIALG GGLPKGR+VEI
Sbjct: 5 KSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGRIVEI 64
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL IAEAQ++GG C F+DAEHALDP A +GV + LL++QPD GEQ
Sbjct: 65 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQGLLISQPDTGEQ 124
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 125 ALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 184
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+ ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+ EE +G+Q
Sbjct: 185 SKCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAVKEREEVVGNQT 242
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 243 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQGR 302
Query: 303 EAFKQFLVENESVREELVIKL 323
E K FL +N E+ + L
Sbjct: 303 ENAKTFLRDNPDTANEIELAL 323
>gi|207366352|emb|CAQ58071.1| recombinase A [Agrobacterium tumefaciens]
Length = 322
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 187/320 (58%), Positives = 242/320 (75%), Gaps = 3/320 (0%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL+ AL QI SFGKGSIM LG + V VSTGS +LDIALG GGLPKGR++EIYGP
Sbjct: 2 ALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGRIIEIYGP 61
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTTLAL IAEAQ++GG C F+DAEHALDP A +GV + LL++QPD GEQAL
Sbjct: 62 ESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQGLLISQPDTGEQALE 121
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ DTL+RSG+VDV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S S+
Sbjct: 122 ITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISKSKC 181
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+ EE +G+Q VK
Sbjct: 182 MVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSVKEREEVVGNQTRVK 239
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGKEAF 305
+VKNK+APPFK +F++ +G+G+S+ E++DL +K K+GA F+YN + +G+E
Sbjct: 240 VVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQGRENA 299
Query: 306 KQFLVENESVREELVIKLRE 325
K FL +N E+ + LR+
Sbjct: 300 KIFLRDNPETANEIELALRQ 319
>gi|332981390|ref|YP_004462831.1| recA protein [Mahella australiensis 50-1 BON]
gi|332699068|gb|AEE96009.1| recA protein [Mahella australiensis 50-1 BON]
Length = 345
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 183/327 (55%), Positives = 252/327 (77%), Gaps = 3/327 (0%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
M +K+ AL+ AL QI FGKGSIM LG +V V+ TGS +LDIALG GG+P+GRV
Sbjct: 1 MMEKEHALETALSQIEKRFGKGSIMKLGDDTARLNVEVIPTGSLSLDIALGVGGVPRGRV 60
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
VEI+GPE+SGKTT+ALH++A+AQ+ GG FIDAEHALDP+ A+ +GV ++LL++QPD
Sbjct: 61 VEIFGPESSGKTTVALHIVAQAQKIGGTAAFIDAEHALDPAYAKRLGVNIDDLLVSQPDT 120
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + + L+RSG+VDVVV+DSVAALVP+ E+DGEMGDAH+ +QARLMSQALRKL+ +
Sbjct: 121 GEQALEIAEALVRSGAVDVVVIDSVAALVPQAEIDGEMGDAHVGLQARLMSQALRKLTGA 180
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
+S S+++ IFINQ+R K+ +G P E T GG ALKFYASVRL++++ +K G + IG
Sbjct: 181 ISKSKSVAIFINQLREKVGVM-YGNP-ETTPGGRALKFYASVRLDVRKADTIKNGADVIG 238
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF- 299
+ VK+VKNK+APPFK A+F++ +G+GISRES+I+DLA+ +K+G+ ++YND
Sbjct: 239 THTRVKVVKNKVAPPFKQAEFDIIYGEGISRESDILDLAVDQDIIAKSGSWYSYNDNRIG 298
Query: 300 RGKEAFKQFLVENESVREELVIKLREK 326
+GKE KQFL +N + ++ K+RE+
Sbjct: 299 QGKENAKQFLKDNPEICRDIEEKIREQ 325
>gi|319405870|emb|CBI79502.1| RecA protein [Bartonella sp. AR 15-3]
Length = 347
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 190/324 (58%), Positives = 240/324 (74%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI SFGKGSIM LG+ + VSTGS +LDIALG GGLPKGR++EI
Sbjct: 3 KTKALESALSQIERSFGKGSIMRLGQKEQVVEIETVSTGSLSLDIALGIGGLPKGRIIEI 62
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH IAEAQ+ GG C FIDAEHALDP A +GV ENL ++QPD GEQ
Sbjct: 63 YGPESSGKTTLALHSIAEAQKNGGICAFIDAEHALDPIYARKLGVDLENLFISQPDTGEQ 122
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + +TL+RSG+VDV+VVDSVAAL P+ E+DGEMGD+ +QARLMSQALRKL+ S+
Sbjct: 123 ALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDSLPGLQARLMSQALRKLTASIFR 182
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K + IGSQ
Sbjct: 183 SNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAIKDRDTIIGSQT 240
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G+GIS+ E++DL +K K+G+ F+YN + +G+
Sbjct: 241 RVKVVKNKLAPPFKQVEFDIIYGEGISKLGELVDLGVKVGLVEKSGSWFSYNSQRLGQGR 300
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E KQFL E+ + E+ LR+
Sbjct: 301 ENAKQFLREHTEIASEIETALRQN 324
>gi|300718058|ref|YP_003742861.1| recombinase A [Erwinia billingiae Eb661]
gi|299063894|emb|CAX61014.1| Recombinase A [Erwinia billingiae Eb661]
Length = 355
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 198/349 (56%), Positives = 249/349 (71%), Gaps = 7/349 (2%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG T V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRT-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A+ +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIASAQRKGKTCAFIDAEHALDPVYAKKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV++VDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALARSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+G+E +GS+
Sbjct: 185 NSGTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAIKEGDEVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +KHK KAGA ++YN D+ +G
Sbjct: 243 TRVKVVKNKIAAPFKQAEFQIMYGEGINIYGELVDLGVKHKLIEKAGAWYSYNGDKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVV--DHKEPQTAVTDE-DSTEET 347
K FL EN ++ E+ KLR L+ D K A E D T ET
Sbjct: 303 KANSGNFLKENPAIANEIEAKLRATLLTNPDTKPDFVATAAELDETSET 351
>gi|429081569|ref|ZP_19144671.1| RecA protein [Cronobacter condimenti 1330]
gi|426549704|emb|CCJ70712.1| RecA protein [Cronobacter condimenti 1330]
Length = 354
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 198/348 (56%), Positives = 248/348 (71%), Gaps = 6/348 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG T V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRT-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR G C FIDAEHALDP A +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQRAGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV+VVDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALARSGAVDVLVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+GE+ +GS+
Sbjct: 185 NSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKEGEDVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +KHK KAGA ++YN +G
Sbjct: 243 TRVKVVKNKVAAPFKQAEFQILYGEGINFYGELVDLGVKHKLIEKAGAWYSYNGEKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHK-EPQTAV-TDEDSTEET 347
K FL EN+ + +E+ KLRE L+ + P V ++D EET
Sbjct: 303 KANATNFLKENKPMADEIEKKLREMLLNNQDATPDFTVDNNDDGVEET 350
>gi|207366292|emb|CAQ58041.1| recombinase A [Agrobacterium tumefaciens]
gi|207366294|emb|CAQ58042.1| recombinase A [Agrobacterium tumefaciens]
gi|207366296|emb|CAQ58043.1| recombinase A [Agrobacterium tumefaciens]
gi|207366298|emb|CAQ58044.1| recombinase A [Agrobacterium tumefaciens]
gi|207366300|emb|CAQ58045.1| recombinase A [Agrobacterium tumefaciens]
gi|207366302|emb|CAQ58046.1| recombinase A [Agrobacterium tumefaciens]
gi|207366304|emb|CAQ58047.1| recombinase A [Agrobacterium tumefaciens]
gi|207366306|emb|CAQ58048.1| recombinase A [Agrobacterium tumefaciens]
gi|207366308|emb|CAQ58049.1| recombinase A [Agrobacterium tumefaciens]
gi|207366310|emb|CAQ58050.1| recombinase A [Agrobacterium tumefaciens]
gi|207366312|emb|CAQ58051.1| recombinase A [Agrobacterium tumefaciens]
gi|207366348|emb|CAQ58069.1| recombinase A [Agrobacterium tumefaciens]
gi|444436566|gb|AGE09651.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436574|gb|AGE09655.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436604|gb|AGE09670.1| recombinase A, partial [Agrobacterium tumefaciens]
Length = 323
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 188/321 (58%), Positives = 241/321 (75%), Gaps = 3/321 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI SFGKGSIM LG + V VSTGS +LDIALG GGLPKGR+VEI
Sbjct: 5 KSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGRIVEI 64
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL IAEAQ++GG C F+DAEHALDP A +GV + LL++QPD GEQ
Sbjct: 65 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQGLLISQPDTGEQ 124
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 125 ALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 184
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+ ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+ EE +G+Q
Sbjct: 185 SKCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAVKEREEVVGNQT 242
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 243 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQGR 302
Query: 303 EAFKQFLVENESVREELVIKL 323
E K FL +N E+ + L
Sbjct: 303 ENAKTFLRDNPETANEIELAL 323
>gi|256371456|ref|YP_003109280.1| recA protein [Acidimicrobium ferrooxidans DSM 10331]
gi|256008040|gb|ACU53607.1| recA protein [Acidimicrobium ferrooxidans DSM 10331]
Length = 346
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 184/329 (55%), Positives = 247/329 (75%), Gaps = 4/329 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
+D AL+ A+ QI FGKGSIM +G + + TG+ ALD+ALG GGLP+GR+VEI
Sbjct: 3 RDKALETAIAQIEKQFGKGSIMRMGEH-PEMAIESIPTGAMALDLALGVGGLPRGRIVEI 61
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGK+TLALHV+AEAQRQGG C +IDAEHALDP A+ IGV + LL++QPD GEQ
Sbjct: 62 YGPESSGKSTLALHVVAEAQRQGGRCAYIDAEHALDPVYAQAIGVDVDQLLISQPDYGEQ 121
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D LIRSGS+DVV+VDSVAAL PK E++G++GD+H+ +QARLMSQALRKL+ +LS
Sbjct: 122 ALEIADLLIRSGSIDVVIVDSVAALTPKAEIEGDIGDSHVGLQARLMSQALRKLTANLSK 181
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
+ T+ +FINQ+R K+ +G P EVT GG ALKFY+SVRL+I+R+ +K G E +GS+
Sbjct: 182 TNTLAVFINQLREKIGVM-YGSP-EVTPGGRALKFYSSVRLDIRRVESIKDGAEIVGSRA 239
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK APPF+ A+F++ +GKGISRE ++D+A++ KAGA +TY+ +G+
Sbjct: 240 RVKVVKNKCAPPFRQAEFDIAYGKGISREGSLLDVAVEMGLVKKAGAWYTYDGEQLGQGR 299
Query: 303 EAFKQFLVENESVREELVIKLREKLVVDH 331
E K FL N + EL +K+RE++ VD
Sbjct: 300 ENVKAFLAANPQLMAELDVKVRERVAVDR 328
>gi|389815255|ref|ZP_10206601.1| recombinase A [Planococcus antarcticus DSM 14505]
gi|388466034|gb|EIM08343.1| recombinase A [Planococcus antarcticus DSM 14505]
Length = 353
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 188/326 (57%), Positives = 244/326 (74%), Gaps = 4/326 (1%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
MS + AL AL QI FGKGS+M LG T R++ VS+GS ALD ALG GG P+GRV
Sbjct: 1 MSDRKAALDMALKQIEKQFGKGSVMKLGEK-TDRNISSVSSGSLALDTALGIGGYPRGRV 59
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+E+YGPE+SGKTT++LH IAE Q GG FIDAEHALDP A+ +GV + LLL+QPD
Sbjct: 60 IEVYGPESSGKTTVSLHAIAEVQAIGGTAAFIDAEHALDPVYAKNLGVNIDELLLSQPDT 119
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + + L+RSG+VD+VVVDSVAALVPK E++GEMGD+HM +QARLMSQALRKLS
Sbjct: 120 GEQALEITEALVRSGAVDIVVVDSVAALVPKAEIEGEMGDSHMGLQARLMSQALRKLSGI 179
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
++ S TI+IFINQ+R K+ FG P E T GG ALKFY+SVRL ++R +K G E IG
Sbjct: 180 INKSNTIVIFINQIREKIGVM-FGNP-ETTPGGRALKFYSSVRLEVRRAEALKSGTEIIG 237
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYND-RNF 299
++ +KIVKNK+APPF+TA+ ++ +GKGISRE EI+D+ + + K+G+ ++YND R
Sbjct: 238 NRTKIKIVKNKVAPPFRTAEVDIMYGKGISREGEIVDIGSELEIIQKSGSWYSYNDERIG 297
Query: 300 RGKEAFKQFLVENESVREELVIKLRE 325
+G+E KQFL++N VR E+ K+RE
Sbjct: 298 QGRENVKQFLLKNPEVRNEIAGKIRE 323
>gi|224825851|ref|ZP_03698955.1| recA protein [Pseudogulbenkiania ferrooxidans 2002]
gi|224602075|gb|EEG08254.1| recA protein [Pseudogulbenkiania ferrooxidans 2002]
Length = 351
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 187/347 (53%), Positives = 257/347 (74%), Gaps = 8/347 (2%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGSIM + + ++ V+STGS LD+ALG GGLP+GRVVEI
Sbjct: 8 KSRALAAALAQIEKQFGKGSIMRMSDNQITENLQVISTGSLGLDLALGVGGLPRGRVVEI 67
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L V+AEAQ+ GG C +IDAE+ALDP+ A+ +GV E+LL++QPD GEQ
Sbjct: 68 YGPESSGKTTLCLQVVAEAQKLGGTCAYIDAENALDPTYAQKLGVNVEDLLISQPDTGEQ 127
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RS VDV+VVDSVAALVPK E++GEMGD H+ + ARLMSQALRKL+ ++
Sbjct: 128 ALEICDMLVRSSGVDVIVVDSVAALVPKAEIEGEMGDNHVGLHARLMSQALRKLTGNIKR 187
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
+ T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +KKGEE IG++
Sbjct: 188 TNTLVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGGIKKGEEIIGNET 245
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK++PPF+ A F++ +G+GISRE EI++L ++H F K+GA ++YN + +GK
Sbjct: 246 RVKVVKNKVSPPFRQAGFDILYGEGISREGEIVELGVEHGFVEKSGAWYSYNGQKIGQGK 305
Query: 303 EAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETVS 349
+ + +L +N ++ E+ K+RE + ++ A+T+ EE ++
Sbjct: 306 DNTRLWLKDNPAIAREIEGKIREAVGIN-----VAITEGQPEEEELA 347
>gi|317506454|ref|ZP_07964255.1| recA bacterial DNA recombination protein [Segniliparus rugosus ATCC
BAA-974]
gi|316255215|gb|EFV14484.1| recA bacterial DNA recombination protein [Segniliparus rugosus ATCC
BAA-974]
Length = 346
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 191/341 (56%), Positives = 254/341 (74%), Gaps = 11/341 (3%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLG-RSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
++ AL+ A+ QI SFGKGS+M LG ++V P + V+ TGS ALD+ALG GGLPKGRV+E
Sbjct: 7 RNKALELAMAQIDKSFGKGSVMRLGEKAVEP--IAVIPTGSIALDVALGIGGLPKGRVIE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTT+ALH +A AQ GG FIDAEHALDP A+ +GV TENLL++QPD GE
Sbjct: 65 IYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPEYAKKLGVNTENLLVSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D LIRSG++D++V+DSVAALVPK E++GEMGD+H+ +QARLMSQALRK++ +L+
Sbjct: 125 QALEIADMLIRSGALDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITGALN 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T IFINQ+R K+ F GP+E T GG ALKFYASVRL+++RI +K G E + ++
Sbjct: 185 NSGTTAIFINQLREKIGVM-F-GPSETTTGGKALKFYASVRLDVRRIETLKDGTEAVANR 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VKIVKNK+APPFK A+F++ +G GISRE IIDL ++H K+GA +TY D +G
Sbjct: 243 TRVKIVKNKVAPPFKQAEFDIIYGAGISREGSIIDLGVEHGLIRKSGAWYTYGDEQLGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDED 342
KE ++FL+ N +E+ + LR+KL + + V D+D
Sbjct: 303 KENARKFLIANPDKADEIEMLLRDKLQIGVR-----VNDDD 338
>gi|328865278|gb|EGG13664.1| recombinase A [Dictyostelium fasciculatum]
Length = 451
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 184/322 (57%), Positives = 243/322 (75%), Gaps = 3/322 (0%)
Query: 8 LQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPE 67
L+ + +I +FGKG++M LG T V V+ TGS LD+ALG GGLPKGR++EI+GPE
Sbjct: 88 LEATMKEIEQTFGKGTLMKLGSQFTLSKVDVIPTGSLGLDVALGVGGLPKGRIIEIFGPE 147
Query: 68 ASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSL 127
+SGKTTLALHVIA+AQ+ GG C FIDAEHAL+PS A+ +GV + L ++QPD GEQAL +
Sbjct: 148 SSGKTTLALHVIAQAQKVGGNCTFIDAEHALNPSWAQKLGVNLDELFVSQPDSGEQALEI 207
Query: 128 VDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTI 187
VD+L+RS ++ V+VVDSVAALVP+ ELDGEMGD+H+ + ARLMSQALRKLS SL S +
Sbjct: 208 VDSLLRSKTMQVIVVDSVAALVPRVELDGEMGDSHVGVHARLMSQALRKLSPSLKESNCV 267
Query: 188 LIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVKI 247
LIFINQ+R K+ FG P E T GGNALKF++SVRL+I+++G VKKG+ETI +Q+ VK+
Sbjct: 268 LIFINQIRIKIGVM-FGNP-ETTTGGNALKFFSSVRLDIRKVGAVKKGDETIATQVKVKV 325
Query: 248 VKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGKEAFK 306
KNKLAPPF+ A F+++F GI++ EIID+AL K G+ ++YN +G+E K
Sbjct: 326 AKNKLAPPFREAIFDIDFASGINKTGEIIDMALLEGIIEKGGSWYSYNGEQLAQGREKTK 385
Query: 307 QFLVENESVREELVIKLREKLV 328
Q L EN + EE+ KLR++LV
Sbjct: 386 QHLEENRPLLEEIETKLRQRLV 407
>gi|444299278|emb|CCP29588.1| recombinase A, partial [Rhizobium pusense]
gi|444299280|emb|CCP29589.1| recombinase A, partial [Rhizobium pusense]
Length = 319
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 187/321 (58%), Positives = 242/321 (75%), Gaps = 3/321 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI SFGKGSIM LG + V VSTGS +LDIALG GGLPKGR++EI
Sbjct: 1 KSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGRIIEI 60
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL IAEAQ++GG C F+DAEHALDP A +GV ++LL++QPD GEQ
Sbjct: 61 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQSLLISQPDTGEQ 120
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 121 ALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 180
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+ ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+ EE +G+Q
Sbjct: 181 SKCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAVKEREEVVGNQT 238
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 239 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQGR 298
Query: 303 EAFKQFLVENESVREELVIKL 323
E K FL +N E+ + L
Sbjct: 299 ENAKTFLRDNPDTANEIELAL 319
>gi|171464132|ref|YP_001798245.1| recA protein [Polynucleobacter necessarius subsp. necessarius
STIR1]
gi|171193670|gb|ACB44631.1| recA protein [Polynucleobacter necessarius subsp. necessarius
STIR1]
Length = 362
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 191/344 (55%), Positives = 251/344 (72%), Gaps = 5/344 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGSIM LG + + VVS+GS LDIALG GGL +GRV+EI
Sbjct: 21 KQKALTAALAQIEKQFGKGSIMRLGDAEISEDIQVVSSGSLGLDIALGVGGLARGRVIEI 80
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL LH IAE Q+ GG C FIDAEHALD A +GV NLL++QPD GEQ
Sbjct: 81 YGPESSGKTTLTLHAIAEMQKLGGTCAFIDAEHALDVQYAGKLGVDVNNLLISQPDTGEQ 140
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RSGS+D++V+DSVAALVPK E++G+MGD+ +QARLMSQALRKL+ ++
Sbjct: 141 ALEIADALVRSGSIDLIVIDSVAALVPKAEIEGDMGDSLPGLQARLMSQALRKLTGAIKR 200
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
+ T +IFINQ+R K+ FG P E T GGNALKFYAS+RL+I+RIG +KKG+E +G++
Sbjct: 201 TNTTVIFINQIRMKIGVI-FGSP-ETTTGGNALKFYASMRLDIRRIGSIKKGDEVVGNET 258
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGK 302
VK+VKNK++PPF+ A F++ +G GISRE EIID+ ++ K+G+ ++YN DR +GK
Sbjct: 259 RVKVVKNKVSPPFREAIFDIMYGAGISREGEIIDMGVEADLIEKSGSWYSYNGDRIGQGK 318
Query: 303 EAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEE 346
+ ++FL EN ++ +++ K+REKL V K VTD S EE
Sbjct: 319 DNVREFLRENPAIAKDIEAKIREKLGV--KSGSAVVTDVLSEEE 360
>gi|207366328|emb|CAQ58059.1| recombinase A [Agrobacterium tumefaciens]
gi|207366330|emb|CAQ58060.1| recombinase A [Agrobacterium tumefaciens]
gi|207366332|emb|CAQ58061.1| recombinase A [Agrobacterium tumefaciens]
gi|207366334|emb|CAQ58062.1| recombinase A [Agrobacterium tumefaciens]
gi|207366336|emb|CAQ58063.1| recombinase A [Agrobacterium tumefaciens]
gi|207366338|emb|CAQ58064.1| recombinase A [Agrobacterium tumefaciens]
gi|207366340|emb|CAQ58065.1| recombinase A [Agrobacterium tumefaciens]
Length = 323
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 186/321 (57%), Positives = 242/321 (75%), Gaps = 3/321 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI SFGKGSIM LG + V VSTGS +LDIALG GGLPKGR++EI
Sbjct: 5 KSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGRIIEI 64
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL IAEAQ++GG C F+DAEHALDP A +GV ++LL++QPD GEQ
Sbjct: 65 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQSLLISQPDTGEQ 124
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+V+DSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 125 ALEITDTLVRSGAVDVLVIDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 184
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+ ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+ EE +G+Q
Sbjct: 185 SKCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAVKEREEVVGNQT 242
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 243 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQGR 302
Query: 303 EAFKQFLVENESVREELVIKL 323
E K FL +N E+ + L
Sbjct: 303 ENAKTFLRDNPDTANEIELAL 323
>gi|336321147|ref|YP_004601115.1| recA protein [[Cellvibrio] gilvus ATCC 13127]
gi|336104728|gb|AEI12547.1| recA protein [[Cellvibrio] gilvus ATCC 13127]
Length = 346
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/326 (57%), Positives = 250/326 (76%), Gaps = 6/326 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLG-RSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
++ AL+ AL QI FGKGSIM LG P V V+ TGS ALD+ALG GGLP+GR++E
Sbjct: 7 REKALEAALSQIDRQFGKGSIMRLGDEGRAP--VEVIPTGSIALDVALGIGGLPRGRIIE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTT+ALH +A AQR GG FIDAEHALDP A+ +GV T+ LL++QPD GE
Sbjct: 65 IYGPESSGKTTVALHAVANAQRAGGIAAFIDAEHALDPEYAKKLGVDTDALLVSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL ++D LIRSG++D++V+DSVAALVPK E++GEMGD+H+ +QARLMSQALRK++ +L+
Sbjct: 125 QALEIMDMLIRSGAIDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITGALN 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T IFINQ+R K+ F FG P E T GG ALKFYASVR++I+RI +K+G E +G++
Sbjct: 185 SSGTTAIFINQLREKIGVF-FGSP-ETTTGGKALKFYASVRMDIRRIETLKEGTEAVGNR 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRG 301
VK+VKNK+APPFK A+F++ +G GISRE +ID+ ++H F K+GA FTY D+ +G
Sbjct: 243 TRVKVVKNKMAPPFKQAEFDILYGVGISREGSLIDMGVEHGFVRKSGAWFTYEGDQLGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKL 327
KE ++FL +N + EEL K++EKL
Sbjct: 303 KENARKFLRDNPDLAEELDKKIKEKL 328
>gi|444376501|ref|ZP_21175745.1| RecA protein [Enterovibrio sp. AK16]
gi|443679479|gb|ELT86135.1| RecA protein [Enterovibrio sp. AK16]
Length = 347
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/345 (55%), Positives = 250/345 (72%), Gaps = 5/345 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG T + VSTGS +LDIALG GGLP GR+VE
Sbjct: 4 NKQKALAAALGQIEKQFGKGSIMRLGDDRT-MDIETVSTGSLSLDIALGAGGLPYGRIVE 62
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIAEAQ+QG C FIDAEHALDP A + V +NLL++QPD GE
Sbjct: 63 IYGPESSGKTTLTLQVIAEAQKQGKTCAFIDAEHALDPVYARKLHVDIDNLLVSQPDTGE 122
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV+++DSVAAL PK E++GEMGD+HM +QAR++SQA+RKL+ ++
Sbjct: 123 QALEIADALTRSGAVDVIIIDSVAALTPKAEIEGEMGDSHMGLQARMLSQAMRKLTANIK 182
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+G+E +G+
Sbjct: 183 NSNTLMIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGSIKEGDEVVGND 240
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+ E+IDL +KHK KAGA ++YN D+ +G
Sbjct: 241 TRVKVVKNKIAAPFKQAEFQIMYGEGINLYGELIDLGVKHKLVEKAGAWYSYNGDKIGQG 300
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEE 346
K +FL EN + +EL LR+ +++ +PQ D + EE
Sbjct: 301 KANACRFLKENPEIAKELDKTLRD-MLLQTGQPQAENNDAELPEE 344
>gi|284097292|ref|ZP_06385430.1| recombinase A [Candidatus Poribacteria sp. WGA-A3]
gi|283831198|gb|EFC35170.1| recombinase A [Candidatus Poribacteria sp. WGA-A3]
Length = 349
Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust.
Identities = 187/321 (58%), Positives = 244/321 (76%), Gaps = 3/321 (0%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL+ A+ QI FGKGSIM LG V STGS ALD+ALG GGLP+GRVVEI+GP
Sbjct: 3 ALELAVTQIEKQFGKGSIMKLGTGDVSDDVQATSTGSLALDLALGVGGLPRGRVVEIFGP 62
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTTL LH IAEAQ+ GG FIDAEHALD S A+ +GVK ++LL+AQPD GEQAL
Sbjct: 63 ESSGKTTLCLHAIAEAQKTGGSAAFIDAEHALDVSYAKKLGVKIDDLLVAQPDTGEQALE 122
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ +TL+RSG++D+VVVDSVAALVP+ E++GEMGD+HM +QARLMSQALRKL+ ++S S T
Sbjct: 123 IAETLVRSGAIDLVVVDSVAALVPRAEIEGEMGDSHMGLQARLMSQALRKLTGAISKSLT 182
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
++FINQ+R K+ FG P E T GGNALKFY+SVRL+I+RI +K G+E IGS++ VK
Sbjct: 183 TVVFINQIRMKIGVM-FGNP-ETTTGGNALKFYSSVRLDIRRIESIKDGQEVIGSRVRVK 240
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGKEAF 305
+VKNK APPF+ A+F++ F +G+S+ E+IDL ++ K KAGA ++Y + +G+EA
Sbjct: 241 VVKNKTAPPFRQAEFDIMFAEGVSKVGELIDLGVEKKIIDKAGAWYSYREERLGQGREAV 300
Query: 306 KQFLVENESVREELVIKLREK 326
K FL EN +E+ K+RE+
Sbjct: 301 KAFLKENPETAKEIETKIREQ 321
>gi|403059641|ref|YP_006647858.1| recA protein [Pectobacterium carotovorum subsp. carotovorum PCC21]
gi|402806967|gb|AFR04605.1| recA protein [Pectobacterium carotovorum subsp. carotovorum PCC21]
Length = 357
Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/346 (56%), Positives = 247/346 (71%), Gaps = 6/346 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A+ +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV++VDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+R G +K+GEE +GS+
Sbjct: 185 QANTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRTGAIKEGEEVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +KHK KAGA ++YN D+ +G
Sbjct: 243 TRVKVVKNKVAAPFKQAEFQILYGEGINIHGELVDLGVKHKLIEKAGAWYSYNGDKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKE--PQTAVTDEDSTE 345
K FL EN ++ EL KLRE L+ E P TA D E
Sbjct: 303 KANACNFLKENPAIAAELDKKLREMLLHKGNELTPATAGNSHDEDE 348
>gi|242238443|ref|YP_002986624.1| recA protein [Dickeya dadantii Ech703]
gi|242130500|gb|ACS84802.1| recA protein [Dickeya dadantii Ech703]
Length = 363
Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust.
Identities = 194/335 (57%), Positives = 243/335 (72%), Gaps = 4/335 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGVGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A+ +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV++VDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALARSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K GEE IGS+
Sbjct: 185 QSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGSIKDGEEVIGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +K K KAGA ++YN D+ +G
Sbjct: 243 TRVKVVKNKVAAPFKQAEFQILYGEGINTYGELVDLGVKFKLIEKAGAWYSYNGDKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQT 336
K FL EN ++ E+ KLRE L+ EP T
Sbjct: 303 KSNACNFLKENPAISTEIDKKLREMLLHKGNEPVT 337
>gi|365855071|ref|ZP_09395128.1| RecA protein [Acetobacteraceae bacterium AT-5844]
gi|363719510|gb|EHM02817.1| RecA protein [Acetobacteraceae bacterium AT-5844]
Length = 353
Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust.
Identities = 185/322 (57%), Positives = 242/322 (75%), Gaps = 3/322 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K+ AL AL QI +FGKGSIM +G V V+ TGS LD+ALG GGLPKGR++EI
Sbjct: 10 KNKALDAALSQIERAFGKGSIMRMGAKQQSDEVEVIPTGSLGLDLALGIGGLPKGRIIEI 69
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH IAEAQ++GG C FIDAEHALDP A +GV +NLL++QPD GEQ
Sbjct: 70 YGPESSGKTTLALHAIAEAQKRGGTCAFIDAEHALDPGYARKLGVDVDNLLISQPDAGEQ 129
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+VVDSVAALVP+ EL+GEMGD+H+ + ARLMSQALRKL+ ++S
Sbjct: 130 ALEICDTLVRSGAVDVLVVDSVAALVPRAELEGEMGDSHVGLHARLMSQALRKLTGTVSR 189
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S +LIF+NQ+R K+ FG P E T GGNALKFYASVRL I+RIG +K + +G+Q
Sbjct: 190 SNCLLIFLNQIRLKIGVM-FGNP-ETTTGGNALKFYASVRLEIRRIGQIKDRDNVVGNQT 247
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRGK 302
VK+VKNK+APPF+ +F++ +G+G+S+ E+IDL +K K+GA F+ N R +G+
Sbjct: 248 RVKVVKNKMAPPFRQVEFDIMYGEGVSKVGELIDLGVKASVVEKSGAWFSCDNQRIGQGR 307
Query: 303 EAFKQFLVENESVREELVIKLR 324
E KQFL +N ++ E + ++R
Sbjct: 308 ENAKQFLRDNPAMAESIENRIR 329
>gi|207366346|emb|CAQ58068.1| recombinase A [Agrobacterium tumefaciens]
Length = 323
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/321 (58%), Positives = 241/321 (75%), Gaps = 3/321 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI SFGKGSIM LG + V VSTGS +LDIALG GGLPKGR++EI
Sbjct: 5 KSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGRIIEI 64
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL IAEAQ++GG C F+DAEHALDP A +GV + LL++QPD GEQ
Sbjct: 65 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQGLLISQPDTGEQ 124
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 125 ALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 184
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+ ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+ EE +G+Q
Sbjct: 185 SKCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAVKEREEVVGNQT 242
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 243 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQGR 302
Query: 303 EAFKQFLVENESVREELVIKL 323
E K FL +N E+ + L
Sbjct: 303 ENAKTFLRDNPETANEIELAL 323
>gi|444299292|emb|CCP29595.1| recombinase A, partial [Rhizobium nepotum]
gi|444299294|emb|CCP29596.1| recombinase A, partial [Rhizobium nepotum]
Length = 323
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/321 (57%), Positives = 242/321 (75%), Gaps = 3/321 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI SFGKGSIM LG + V VSTGS +LDIALG GGLP+GR+VEI
Sbjct: 5 KSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPRGRIVEI 64
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL IAE Q++GG C F+DAEHALDP A +GV +NLL++QPD GEQ
Sbjct: 65 YGPESSGKTTLALQTIAECQKKGGICAFVDAEHALDPIYARKLGVDLQNLLISQPDTGEQ 124
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VD++VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 125 ALEITDTLVRSGAVDILVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 184
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+ ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+ EE +G+Q
Sbjct: 185 SKCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAVKEREEIVGNQT 242
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 243 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQGR 302
Query: 303 EAFKQFLVENESVREELVIKL 323
E K FL +N + E+ + L
Sbjct: 303 ENAKTFLRDNPEMANEIELAL 323
>gi|294634757|ref|ZP_06713286.1| protein RecA [Edwardsiella tarda ATCC 23685]
gi|451966820|ref|ZP_21920071.1| RecA protein [Edwardsiella tarda NBRC 105688]
gi|291091816|gb|EFE24377.1| protein RecA [Edwardsiella tarda ATCC 23685]
gi|451314492|dbj|GAC65433.1| RecA protein [Edwardsiella tarda NBRC 105688]
Length = 353
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/341 (56%), Positives = 253/341 (74%), Gaps = 9/341 (2%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + T + +STGS +LD+ALG GGLP GR+VE
Sbjct: 4 NKQRALAAALGQIEKQFGKGSIMRLGDTQT-LDIESISTGSLSLDVALGIGGLPMGRIVE 62
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
I+GPE+SGKTTL L VIA AQ G C FIDAEHALDP A +GVK ++LL++QPD GE
Sbjct: 63 IFGPESSGKTTLTLSVIARAQAAGKTCAFIDAEHALDPIYAAKLGVKVDDLLVSQPDTGE 122
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L+RSG+VDV++VDSVAAL PK E++GEMGD+H+ +QARLMSQALRKL+ ++
Sbjct: 123 QALEICDALVRSGAVDVIIVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIK 182
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ +++FINQ+R K+ FG P E T GGNALKFY+SVRL+I+RIG +K+G+E +G++
Sbjct: 183 NANCLVVFINQIRMKIGVM-FGNP-ETTTGGNALKFYSSVRLDIRRIGAIKEGDEVVGNE 240
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+APPF+ A+F++ +G GIS+ESE+IDL +KHK K+GA ++YN D+ +G
Sbjct: 241 TRVKVVKNKVAPPFRQAEFQILYGAGISKESELIDLGVKHKLLDKSGAWYSYNGDKIGQG 300
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDED 342
K +FL EN ++ EL KLRE L++ H A TD D
Sbjct: 301 KANSMKFLQENPAISAELEGKLRE-LLLSH----AAATDAD 336
>gi|302037041|ref|YP_003797363.1| recombinase recA [Candidatus Nitrospira defluvii]
gi|300605105|emb|CBK41438.1| Recombinase RecA [Candidatus Nitrospira defluvii]
Length = 370
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/329 (55%), Positives = 252/329 (76%), Gaps = 6/329 (1%)
Query: 1 MSKKD---LALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPK 57
M++KD AL AL QI +GKG++M LG P VP +S+GS LDIALG GG P+
Sbjct: 1 MTEKDEKKRALDLALAQIEKQYGKGAVMKLGADDRPADVPAISSGSLGLDIALGVGGFPR 60
Query: 58 GRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQ 117
GRV+EI+GPE+SGKTTL LH IAEAQ+ GG FIDAEHALD + A+ +GV+T++LL++Q
Sbjct: 61 GRVIEIFGPESSGKTTLTLHAIAEAQKAGGVAAFIDAEHALDLTYAKKLGVQTDDLLVSQ 120
Query: 118 PDCGEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKL 177
PD GEQAL + +TL+RSG++DV+VVDSVAALVP+ E++GEMGD+HM +QARLMSQALRKL
Sbjct: 121 PDTGEQALEIAETLVRSGAIDVIVVDSVAALVPRAEIEGEMGDSHMGLQARLMSQALRKL 180
Query: 178 SHSLSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEE 237
+ ++S SQT LIFINQ+R K+ FG P E T GGNALKFY+SVRL+I+RI +K G++
Sbjct: 181 TAAISKSQTTLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYSSVRLDIRRIESIKDGQD 238
Query: 238 TIGSQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-D 296
GS++ VK+VKNK+APPF+ A+F++ F +GIS+ E++D+ ++ + KAGA ++Y +
Sbjct: 239 VTGSRVRVKVVKNKMAPPFRQAEFDIMFAEGISKSGELVDIGVEKRVVEKAGAWYSYKGE 298
Query: 297 RNFRGKEAFKQFLVENESVREELVIKLRE 325
R +G+EA + FL N ++ +E+ K+R+
Sbjct: 299 RLGQGREAVRDFLKTNPAIAKEIEGKVRD 327
>gi|283798535|ref|ZP_06347688.1| protein RecA [Clostridium sp. M62/1]
gi|291073798|gb|EFE11162.1| RecA protein [Clostridium sp. M62/1]
gi|295090129|emb|CBK76236.1| protein RecA [Clostridium cf. saccharolyticum K10]
gi|295115571|emb|CBL36418.1| protein RecA [butyrate-producing bacterium SM4/1]
Length = 365
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 184/354 (51%), Positives = 255/354 (72%), Gaps = 3/354 (0%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL AL QI ++GKGS+M LG S ++ V TGS +LDIALG GG+P+GR++E+YGP
Sbjct: 13 ALDAALTQIEKAYGKGSVMKLGDSGANMNIETVPTGSLSLDIALGLGGVPRGRIIEVYGP 72
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTT+ALH++AE Q++GG FIDAEHALDP A+ IGV +NL ++QPD GEQAL
Sbjct: 73 ESSGKTTVALHMVAEVQKRGGIAGFIDAEHALDPVYAKNIGVDIDNLYISQPDNGEQALE 132
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ +T++RSG+VD+V+VDSVAALVPK E+DGEMGD+H+ +QARLMSQALRKL+ +S S
Sbjct: 133 ITETMVRSGAVDIVIVDSVAALVPKAEIDGEMGDSHVGLQARLMSQALRKLTAIISKSNC 192
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
I+IFINQ+R K+ FG P E T GG ALKFYASVR++++RI +K+G E +G+++ +K
Sbjct: 193 IVIFINQLREKVGVM-FGNP-ETTTGGRALKFYASVRMDVRRIETLKQGGEMVGNRVRIK 250
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGKEAF 305
+VKNK+APPFK A+F++ FGKGIS+E +I+DLA K K+GA + YN +G+E
Sbjct: 251 VVKNKIAPPFKEAEFDIMFGKGISKEGDILDLAAKENIVEKSGAWYAYNGSKIGQGRENA 310
Query: 306 KQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETVSTISPDSTDEE 359
K FL N+ + +E+ K+R K +D + ++ + PD DE+
Sbjct: 311 KNFLQANQELCQEIEAKVRAKYGLDGAAADEGSAEREADAQEPKLAMPDLGDEQ 364
>gi|238791371|ref|ZP_04635010.1| hypothetical protein yinte0001_31280 [Yersinia intermedia ATCC
29909]
gi|238729504|gb|EEQ21019.1| hypothetical protein yinte0001_31280 [Yersinia intermedia ATCC
29909]
Length = 354
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 195/348 (56%), Positives = 249/348 (71%), Gaps = 6/348 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A+ +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIASAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV++VDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK G+ +GS+
Sbjct: 185 NANTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKDGDVVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +KHK KAGA ++YN D+ +G
Sbjct: 243 TRVKVVKNKIAAPFKQAEFQILYGEGININGELVDLGVKHKLIEKAGAWYSYNGDKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVV--DHKEPQTAVTDEDSTEET 347
K +L EN +V EL KLRE L+ + ++P D T+ET
Sbjct: 303 KANASNYLKENPAVAAELDKKLREMLLNGGNGEQPVATAAFADETDET 350
>gi|333985518|ref|YP_004514728.1| recombinase A [Methylomonas methanica MC09]
gi|333809559|gb|AEG02229.1| Protein recA [Methylomonas methanica MC09]
Length = 351
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/324 (57%), Positives = 242/324 (74%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGS+M +G R + VVSTGS +LDIALG GGLP+GRV+EI
Sbjct: 5 KKKALGAALMQIEKQFGKGSVMRMGDVAASRDIEVVSTGSLSLDIALGVGGLPRGRVIEI 64
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L IA+ Q+ GG F+DAEHALDP AE IGV ++LL++QPD GEQ
Sbjct: 65 YGPESSGKTTLTLQTIAQMQKLGGTAAFVDAEHALDPVYAEKIGVNIDDLLVSQPDTGEQ 124
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RSG+VD+VVVDSVAAL PK E++G+MGD+HM +QARLMSQALRKL+ ++
Sbjct: 125 ALEITDMLVRSGAVDIVVVDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTANIKR 184
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +KKG+E IG++
Sbjct: 185 SNTLVIFINQLRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAIKKGDEVIGNET 242
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRGK 302
VK+VKNK+APPFK A FE+ +G+G+S E++DL + F K+G+ ++Y N++ +GK
Sbjct: 243 RVKVVKNKVAPPFKQADFEILYGEGVSFYGELVDLGVAFGFVQKSGSWYSYGNEKIGQGK 302
Query: 303 EAFKQFLVENESVREELVIKLREK 326
+ KQFL +N EL +REK
Sbjct: 303 DNAKQFLKDNPDKAAELEKAIREK 326
>gi|304413368|ref|ZP_07394841.1| RecA/RadA recombinase [Candidatus Regiella insecticola LSR1]
gi|304284211|gb|EFL92604.1| RecA/RadA recombinase [Candidatus Regiella insecticola LSR1]
Length = 391
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 195/357 (54%), Positives = 248/357 (69%), Gaps = 4/357 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VEI
Sbjct: 37 KKKALAAALTQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVEI 95
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A+ +GV +NLL +QPD GEQ
Sbjct: 96 YGPESSGKTTLTLQVIASAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDNGEQ 155
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L RSG+VDV++VDSVAAL PK E++GEMGDAHM + AR+MS+A+RK + +L+
Sbjct: 156 ALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEMGDAHMGLAARMMSKAMRKFAGNLNN 215
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
+ T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K GEE IGS
Sbjct: 216 ANTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGSIKNGEEVIGSDT 273
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+A PFK A+F++ +G+GI+ E+I+L +KHK KAGA ++Y +GK
Sbjct: 274 RVKVVKNKIAAPFKQAEFQIHYGEGINLNGELIELGVKHKLIEKAGAWYSYKGNKIGQGK 333
Query: 303 EAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETVSTISPDSTDEE 359
Q+L ENE+++ EL LR+ L+ A T + E+ + T EE
Sbjct: 334 ANASQYLKENEAIKSELDKTLRDMLLGGGSNATDADTAHPAVTESFIAEKNNETSEE 390
>gi|253689582|ref|YP_003018772.1| recA protein [Pectobacterium carotovorum subsp. carotovorum PC1]
gi|259563340|sp|C6DCR1.1|RECA_PECCP RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|251756160|gb|ACT14236.1| recA protein [Pectobacterium carotovorum subsp. carotovorum PC1]
Length = 357
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 198/346 (57%), Positives = 249/346 (71%), Gaps = 8/346 (2%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A+ +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV++VDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+R G +K+GEE +GS+
Sbjct: 185 QANTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRTGAIKEGEEVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +KHK KAGA ++YN D+ +G
Sbjct: 243 TRVKVVKNKVAAPFKQAEFQILYGEGINIHGELVDLGVKHKLIEKAGAWYSYNGDKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKE--PQTAVT--DEDS 343
K FL EN +V EL KLRE L+ E P TA DED+
Sbjct: 303 KANACNFLKENPAVAAELDKKLREMLLHKGNELTPATAGNSHDEDA 348
>gi|197284275|ref|YP_002150147.1| recombinase A [Proteus mirabilis HI4320]
gi|425067171|ref|ZP_18470287.1| protein recA [Proteus mirabilis WGLW6]
gi|425073316|ref|ZP_18476422.1| protein recA [Proteus mirabilis WGLW4]
gi|132231|sp|P11406.2|RECA_PROMI RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|238693164|sp|B4EUV6.1|RECA_PROMH RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|45632|emb|CAA33015.1| unnamed protein product [Proteus mirabilis]
gi|194681762|emb|CAR40963.1| protein RecA (recombinase A) [Proteus mirabilis HI4320]
gi|404595294|gb|EKA95839.1| protein recA [Proteus mirabilis WGLW4]
gi|404601466|gb|EKB01875.1| protein recA [Proteus mirabilis WGLW6]
Length = 355
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/339 (56%), Positives = 246/339 (72%), Gaps = 5/339 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + +V +STGS +LD+ALG GGLP+GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MNVETISTGSLSLDVALGAGGLPRGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A+ +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIASAQREGKICAFIDAEHALDPIYAQKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV+VVDSVAAL PK E++GE+GD+H+ + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALSRSGAVDVIVVDSVAALTPKAEIEGEIGDSHVGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK G+E IGS+
Sbjct: 185 NSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGSVKNGDEVIGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK+VKNK+A PFK A+F++ +G+GI+ E+IDL +KHK KAGA ++YN +G
Sbjct: 243 TRVKVVKNKVAAPFKQAEFQIMYGEGINTYGELIDLGVKHKLVEKAGAWYSYNGEKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTD 340
K +L E+ + EL KLRE ++++H T+ D
Sbjct: 303 KANATNYLKEHPEMYNELNTKLRE-MLLNHAGEFTSAAD 340
>gi|256390779|ref|YP_003112343.1| recA protein [Catenulispora acidiphila DSM 44928]
gi|256357005|gb|ACU70502.1| recA protein [Catenulispora acidiphila DSM 44928]
Length = 383
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/337 (56%), Positives = 251/337 (74%), Gaps = 8/337 (2%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLG-RSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
+ ++ AL AL QI +FGKGS+M LG RSV P + ++ TGS ALD+ALG GGLP+GRV
Sbjct: 6 TDREKALDAALAQIERNFGKGSVMRLGARSVQP--IDIIPTGSIALDVALGIGGLPRGRV 63
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
VEIYGPE+SGKTT+ALH +A AQ+ GG FIDAEHALDP A IGV T+ LL++QPD
Sbjct: 64 VEIYGPESSGKTTIALHAVANAQKAGGQAAFIDAEHALDPDYARNIGVDTDLLLISQPDT 123
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + DTLIRSG++D++V+DSVAALVPK E++GEMGD+H+ +QARLMSQALRKL+
Sbjct: 124 GEQALEIADTLIRSGALDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTGV 183
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
+ + T +IFINQ+R K+ FG P E T GG ALKFYASVRL+I+RI +K G E +
Sbjct: 184 IHQTNTTVIFINQLREKVGVM-FGSP-ETTTGGRALKFYASVRLDIRRIETLKDGTEAVA 241
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF- 299
++ VK+VKNK+APPFK A+F++ FG GISRE +ID+ ++H F KAGA FTY++
Sbjct: 242 NRTRVKVVKNKVAPPFKQAEFDVVFGSGISREGSLIDMGVEHGFVKKAGAWFTYSEGQLG 301
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVDHK--EP 334
+G+E ++FL EN V + L ++EKL + K EP
Sbjct: 302 QGRENARRFLKENPDVADGLEKLIKEKLGIGPKLDEP 338
>gi|406705826|ref|YP_006756179.1| recombinase A [alpha proteobacterium HIMB5]
gi|406651602|gb|AFS47002.1| RecA protein [alpha proteobacterium HIMB5]
Length = 385
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/347 (53%), Positives = 251/347 (72%), Gaps = 4/347 (1%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
+ +K+ AL A+ QIT +FGKGS+M LG V VSTGS +LD+ALG GGLPKGR+
Sbjct: 19 LKEKNKALDAAISQITDNFGKGSVMKLGEK-RAMDVESVSTGSLSLDLALGIGGLPKGRI 77
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+E+YGPE+SGKTTLAL V+AEAQ+ GG C F+DAEHALDP A+ +GV TE LL++QPD
Sbjct: 78 IEVYGPESSGKTTLALQVVAEAQKSGGICAFVDAEHALDPVYAKKLGVNTEELLISQPDT 137
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + DTL++SGS+ V+V+DSVAAL PK E++GEMGD H+ +Q+RLMSQALRKL+ S
Sbjct: 138 GEQALEIADTLVKSGSISVIVIDSVAALTPKAEIEGEMGDHHVGLQSRLMSQALRKLTGS 197
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
+S + T++IFINQ+R K+ FG P E T GGNALKFY+SVR++I+RIG +K +E IG
Sbjct: 198 ISNTNTMMIFINQIRMKIGVM-FGSP-ETTSGGNALKFYSSVRMDIRRIGAIKDKDEIIG 255
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF- 299
+ VK+VKNK+APPFK +F+L +G+GIS+ E++DL K K+GA + Y
Sbjct: 256 NTTRVKVVKNKVAPPFKVVEFDLMYGRGISKMGELVDLGAKADIIEKSGAWYAYKGEKIG 315
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEE 346
+G+E K FL +N + E+ + +REK V K+ + D + E+
Sbjct: 316 QGRENAKTFLAQNPKIAAEVELAIREKAGVISKKIEGNPLDPEKVEK 362
>gi|262273677|ref|ZP_06051490.1| RecA protein [Grimontia hollisae CIP 101886]
gi|262222092|gb|EEY73404.1| RecA protein [Grimontia hollisae CIP 101886]
Length = 347
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 191/344 (55%), Positives = 249/344 (72%), Gaps = 5/344 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGSIM LG T + VSTGS +LDIALG GGLP GR+VEI
Sbjct: 5 KQKALAAALGQIEKQFGKGSIMRLGDDRT-MDIETVSTGSLSLDIALGAGGLPYGRIVEI 63
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIAEAQ+QG C FIDAEHALDP A + V +NLL++QPD GEQ
Sbjct: 64 YGPESSGKTTLTLQVIAEAQKQGKTCAFIDAEHALDPIYARKLNVDIDNLLVSQPDTGEQ 123
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L RSG+VDV+++DSVAAL PK E++GEMGD+HM +QAR++SQA+RKL+ ++
Sbjct: 124 ALEIADALTRSGAVDVIIIDSVAALTPKAEIEGEMGDSHMGLQARMLSQAMRKLTANIKN 183
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+G+E +G+
Sbjct: 184 SNTLMIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGSIKEGDEVVGNDT 241
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+A PFK A+F++ +G+GI+ E+IDL +KHK KAGA ++YN +GK
Sbjct: 242 RVKVVKNKIAAPFKQAEFQILYGEGINLYGELIDLGVKHKLVEKAGAWYSYNGEKIGQGK 301
Query: 303 EAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEE 346
+FL EN + +EL LR+ +++ + +PQ D + EE
Sbjct: 302 ANACKFLKENPEIAKELDKTLRD-MLLQNGQPQAENKDAELPEE 344
>gi|330993236|ref|ZP_08317172.1| Protein recA [Gluconacetobacter sp. SXCC-1]
gi|329759638|gb|EGG76146.1| Protein recA [Gluconacetobacter sp. SXCC-1]
Length = 348
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/324 (57%), Positives = 247/324 (76%), Gaps = 4/324 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI +FGKGSIM +G + V V+STGS LDIALG GGLP+GR+VEI
Sbjct: 9 KSKALEGALSQIERAFGKGSIMRMGERPS-EQVDVISTGSLGLDIALGIGGLPRGRIVEI 67
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ALH IAEAQR+GG C FIDAEHALDP A +GV +NLL++QPD GEQ
Sbjct: 68 YGPESSGKTTMALHAIAEAQRKGGTCAFIDAEHALDPGYARKLGVDVDNLLISQPDAGEQ 127
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+VVDSVAALVP+ EL+G+MGD+H+ + ARLMSQALRKL+ S+S
Sbjct: 128 ALEIADTLVRSGAIDVLVVDSVAALVPRAELEGDMGDSHVGLHARLMSQALRKLTGSVSR 187
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T+LIF+NQ+R K+ FG P E T GGNALKFYASVR++I+RIG +K +E G+Q
Sbjct: 188 SNTMLIFLNQIRLKIGVM-FGSP-ETTTGGNALKFYASVRMDIRRIGSIKDKDEVTGNQT 245
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPF+ +F++ +G+GIS+ E+IDL +K K+GA F+ + + +G+
Sbjct: 246 RVKVVKNKMAPPFRQVEFDIMYGEGISKVGELIDLGVKAGIVEKSGAWFSCDSQRIGQGR 305
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E KQFL ++ + ++ ++RE+
Sbjct: 306 ENAKQFLRDHPEMAADIERRVREQ 329
>gi|408375592|ref|ZP_11173255.1| recA protein [Alcanivorax hongdengensis A-11-3]
gi|407764556|gb|EKF73030.1| recA protein [Alcanivorax hongdengensis A-11-3]
Length = 344
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 183/331 (55%), Positives = 251/331 (75%), Gaps = 4/331 (1%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
MS K AL AL QI FGKGS+M +G R +P +STGS LDIALG GGLPKGR+
Sbjct: 1 MSDKSKALSAALSQIERQFGKGSVMRMGDRKRER-MPSISTGSLGLDIALGIGGLPKGRI 59
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
VEIYGPE+SGKTTL L VIA+AQ++G C F+DAEHALDP AE +GV ++L+++QPD
Sbjct: 60 VEIYGPESSGKTTLTLSVIAQAQKKGATCAFVDAEHALDPDYAEKLGVNVDDLIVSQPDT 119
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + D L+RSG+VDVV+VDSVAALVPK E++GEMGDAH+ +QARLMSQALRK++ +
Sbjct: 120 GEQALEITDMLVRSGAVDVVIVDSVAALVPKAEIEGEMGDAHVGLQARLMSQALRKITGN 179
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
+ + T+++FINQ+R K+ FG P E T GGNALKFY+SVRL+I+RIG VK+G+E G
Sbjct: 180 VKNANTLVVFINQIRMKIGVM-FGNP-ETTTGGNALKFYSSVRLDIRRIGAVKQGDEVTG 237
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNF 299
++ VK+VKNK++PPF+ A+F++ +G+GI++ E++DL ++ K+GA + Y D+
Sbjct: 238 NETRVKVVKNKVSPPFRQAEFQILYGQGINQLGEVLDLGVQQGLVDKSGAWYAYKGDKIG 297
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVD 330
+GK+ +FL EN +V EE+ ++R +L+ D
Sbjct: 298 QGKQNACEFLRENPAVAEEIEQEIRARLLPD 328
>gi|383389327|gb|AFH09641.1| recombinase A [Aeromonas salmonicida]
Length = 353
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/349 (55%), Positives = 253/349 (72%), Gaps = 9/349 (2%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGSIM LG S T + +STGS +LD+ALG GGLP GR+VEI
Sbjct: 5 KQKALAAALGQIEKQFGKGSIMRLGDSKT-MDIEAISTGSLSLDVALGIGGLPCGRIVEI 63
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIAEAQ++G C FIDAEHALDP A +GV ++LL++QPD GEQ
Sbjct: 64 YGPESSGKTTLTLQVIAEAQKKGKVCAFIDAEHALDPIYAAKLGVNVDDLLISQPDTGEQ 123
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RS +VDV++VDSVAAL PK E++GEMGD+H+ +QARLMSQALRKL+ ++
Sbjct: 124 ALEICDMLVRSNAVDVIIVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKN 183
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
+ + IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+G+E +G++
Sbjct: 184 ANCLCIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAIKEGDEVVGNET 241
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK A+F++ +G GIS+E E++DL +KHK KAGA ++YN +GK
Sbjct: 242 RVKVVKNKVAPPFKQAEFQIFYGVGISKEGELVDLGVKHKLIDKAGAWYSYNGEKIGQGK 301
Query: 303 EAFKQFLVENESVREELVIKLREKLV---VDHKEPQTAVTD--EDSTEE 346
+ EN+ + E+ +LRE L+ V ++P A D ED +E+
Sbjct: 302 ANVMKLFTENKVMAAEVEARLRELLLSGDVPAEKPVVAAADELEDESEQ 350
>gi|255287396|emb|CAQ58037.2| recombinase A [Agrobacterium tumefaciens]
Length = 320
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/317 (58%), Positives = 240/317 (75%), Gaps = 3/317 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI SFGKGSIM LG + V VSTGS +LDIALG GGLPKGR++EI
Sbjct: 5 KSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGRIIEI 64
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL IAEAQ++GG C F+DAEHALDP A +GV ++LL++QPD GEQ
Sbjct: 65 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQSLLISQPDTGEQ 124
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 125 ALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 184
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+ ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+ EE +G+Q
Sbjct: 185 SKCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAVKEREEVVGNQT 242
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 243 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQGR 302
Query: 303 EAFKQFLVENESVREEL 319
E K FL +N E+
Sbjct: 303 ENAKTFLRDNPDTANEI 319
>gi|121536015|ref|ZP_01667805.1| recA protein [Thermosinus carboxydivorans Nor1]
gi|121305405|gb|EAX46357.1| recA protein [Thermosinus carboxydivorans Nor1]
Length = 345
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/341 (54%), Positives = 253/341 (74%), Gaps = 3/341 (0%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL+ A+ QI FGKGSIM LG + +V V+ TG ALDIALG GG+P+GRVVEIYG
Sbjct: 6 ALENAMRQIEKEFGKGSIMRLGEAAAKMNVEVIPTGCLALDIALGVGGIPRGRVVEIYGH 65
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTT+ALH+IA+AQ+ GG FIDAEHALDP A+ +GV TENLL++QPD GEQAL
Sbjct: 66 ESSGKTTVALHMIAQAQKMGGIAAFIDAEHALDPIYAKKLGVDTENLLISQPDNGEQALE 125
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ D L+RSG++D++VVDSVAALVPK E++GEMGD+H+ +QARLMSQALRKL+ +S S+T
Sbjct: 126 IADALVRSGAIDIIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTGIISKSRT 185
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
IFINQ+R K+ FG P E T GG ALKFYASVRL +++ +K+G E IGS+ +K
Sbjct: 186 TAIFINQIREKVGVM-FGNP-ETTTGGRALKFYASVRLEVRKAEAIKQGSEVIGSRTRIK 243
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYND-RNFRGKEAF 305
+VKNK+APPF+ A+F++ +G+GISRE ++D+ + +K+G+ ++Y D R +GKE
Sbjct: 244 VVKNKVAPPFRQAEFDIMYGEGISREGSLVDIGTELDIITKSGSWYSYKDSRLGQGKENV 303
Query: 306 KQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEE 346
K++L EN + EE+ +K+RE L + T+ D+ + +E
Sbjct: 304 KEYLKENPHIAEEIEMKIREALTGGAIKLTTSAVDDIAVDE 344
>gi|347761691|ref|YP_004869252.1| DNA recombinase RecA [Gluconacetobacter xylinus NBRC 3288]
gi|347580661|dbj|BAK84882.1| DNA recombinase RecA [Gluconacetobacter xylinus NBRC 3288]
Length = 348
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/324 (57%), Positives = 247/324 (76%), Gaps = 4/324 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI +FGKGSIM +G + V V+STGS LDIALG GGLP+GR+VEI
Sbjct: 9 KSKALEGALSQIERAFGKGSIMRMGERPS-EQVDVISTGSLGLDIALGIGGLPRGRIVEI 67
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ALH IAEAQR+GG C FIDAEHALDP A +GV +NLL++QPD GEQ
Sbjct: 68 YGPESSGKTTMALHAIAEAQRKGGTCAFIDAEHALDPGYARKLGVDVDNLLISQPDAGEQ 127
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+VVDSVAALVP+ EL+G+MGD+H+ + ARLMSQALRKL+ S+S
Sbjct: 128 ALEIADTLVRSGAIDVLVVDSVAALVPRAELEGDMGDSHVGLHARLMSQALRKLTGSVSR 187
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T+LIF+NQ+R K+ FG P E T GGNALKFYASVR++I+RIG +K +E G+Q
Sbjct: 188 SNTMLIFLNQIRLKIGVM-FGSP-ETTTGGNALKFYASVRMDIRRIGSIKDKDEVTGNQT 245
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPF+ +F++ +G+GIS+ E+IDL +K K+GA F+ + + +G+
Sbjct: 246 RVKVVKNKMAPPFRQVEFDIMYGEGISKVGELIDLGVKAGIVEKSGAWFSCDSQRIGQGR 305
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E KQFL ++ + ++ ++RE+
Sbjct: 306 ENAKQFLRDHPEMAADIERRVREQ 329
>gi|402771503|ref|YP_006591040.1| protein RecA (Recombinase A) [Methylocystis sp. SC2]
gi|401773523|emb|CCJ06389.1| Protein RecA (Recombinase A) [Methylocystis sp. SC2]
Length = 341
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 188/331 (56%), Positives = 243/331 (73%), Gaps = 5/331 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI +FGKGSIM LG++ + +STGS LDIALG GGLP+GRVVEI
Sbjct: 3 KTKALDAALSQIERAFGKGSIMRLGKNQKAVEIETISTGSLGLDIALGVGGLPRGRVVEI 62
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL LHVIAEAQ+ GG C F+DAEHALDP A +GV E+LL++QPD GEQ
Sbjct: 63 YGPESSGKTTLTLHVIAEAQKLGGVCAFVDAEHALDPIYARKLGVNLEDLLISQPDTGEQ 122
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+VVDSVAAL P+ E++GEMGD +QARLMSQALRKL+ S++
Sbjct: 123 ALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDVQPGLQARLMSQALRKLTASIAR 182
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ +G P E T GGNALKFYASVRL+I+RIG +K EET G+Q
Sbjct: 183 SNTLVIFINQIRMKIGVM-YGSP-ETTTGGNALKFYASVRLDIRRIGAIKDREETTGNQT 240
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E+IDL +K K+GA F+Y+ + +G+
Sbjct: 241 RVKVVKNKVAPPFKQVEFDIMYGEGVSKFGELIDLGVKAGVVEKSGAWFSYDSQRLGQGR 300
Query: 303 EAFKQFLVENESVREELVIKLREK--LVVDH 331
E K FL +N + + +RE L+ D
Sbjct: 301 ENAKSFLKQNPEAAQRIEQAIRENAGLIADR 331
>gi|333894237|ref|YP_004468112.1| recombinase A [Alteromonas sp. SN2]
gi|332994255|gb|AEF04310.1| recombinase A [Alteromonas sp. SN2]
Length = 345
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 190/341 (55%), Positives = 250/341 (73%), Gaps = 8/341 (2%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVV 61
S + AL AL QI FGKG+IM LG + + +STGS +DIALG GGLP GRVV
Sbjct: 3 SNRSKALSAALGQIEKQFGKGAIMRLGDN-QAMDIEAISTGSLTIDIALGIGGLPCGRVV 61
Query: 62 EIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCG 121
EIYGPEASGKTTL L VIAEAQ+ G C F+DAEHALDP A +GV + LL++QPD G
Sbjct: 62 EIYGPEASGKTTLTLQVIAEAQKNGKTCAFVDAEHALDPIYASKLGVNIDELLVSQPDTG 121
Query: 122 EQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSL 181
EQAL + D L+RSG VDVV+VDSVAAL PK E++G+MGD+H+ +QARLMSQALRKL+ ++
Sbjct: 122 EQALEICDMLVRSGGVDVVIVDSVAALTPKAEIEGDMGDSHVGLQARLMSQALRKLTGNI 181
Query: 182 SLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGS 241
S T+ IFINQ+R K+ FG P E T GGNALKFY+SVRL+I+RIG VK+G+E +G+
Sbjct: 182 KRSNTLCIFINQIRMKIGVM-FGSP-ETTTGGNALKFYSSVRLDIRRIGAVKEGDEVVGN 239
Query: 242 QIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFR 300
+ VK+VKNK+APPFK A+F + +G+GIS+E+E+IDL +K K KAGA ++Y DR +
Sbjct: 240 ETRVKVVKNKVAPPFKQAEFMIRYGEGISKEAELIDLGVKQKLVDKAGAWYSYKGDRIGQ 299
Query: 301 GKEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDE 341
GK +FL EN ++ +E+ ++R +L++ P+T +E
Sbjct: 300 GKANVMKFLKENPAIADEIEKQIRAELLL----PKTVKVEE 336
>gi|374336831|ref|YP_005093518.1| recombinase A [Oceanimonas sp. GK1]
gi|372986518|gb|AEY02768.1| recombinase A [Oceanimonas sp. GK1]
Length = 356
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 191/357 (53%), Positives = 261/357 (73%), Gaps = 8/357 (2%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K+ AL AL QI FGKGSIM LG + +V +STGS +LDIALG GGLP GR+VEI
Sbjct: 5 KEKALAAALGQIEKQFGKGSIMRLGDN-KALNVEAISTGSLSLDIALGIGGLPTGRIVEI 63
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIAEAQR G C F+DAEHALDP A +GV ++LL++QPD GEQ
Sbjct: 64 YGPESSGKTTLTLQVIAEAQRAGKVCAFVDAEHALDPVYAGKLGVNVDDLLVSQPDTGEQ 123
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RSG+VDV++VDSVAAL P+ E++GEMGD+H+ +QARLMSQALRKL+ ++
Sbjct: 124 ALEICDMLVRSGAVDVIIVDSVAALTPRAEIEGEMGDSHVGLQARLMSQALRKLTANIKS 183
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
+ + IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+G+E +G++
Sbjct: 184 ANCLCIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKEGDEVVGNET 241
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRGK 302
VK+VKNK+APPFK A+F++ +G GIS+E E+I+L +KHK KAGA ++Y D+ +GK
Sbjct: 242 RVKVVKNKVAPPFKQAEFQIMYGAGISKEGELIELGVKHKLIEKAGAWYSYKGDKIGQGK 301
Query: 303 EAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETVSTI-SPDSTDE 358
++L+E++++ +E+ +LR+ L++ P + D E V+ + PD +E
Sbjct: 302 ANSIKYLLEHKNISDEIEQQLRQMLLL---APGATKDEGDVKGEAVTELDGPDGNNE 355
>gi|294790979|ref|ZP_06756137.1| protein RecA [Scardovia inopinata F0304]
gi|294458876|gb|EFG27229.1| protein RecA [Scardovia inopinata F0304]
Length = 368
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 184/325 (56%), Positives = 247/325 (76%), Gaps = 6/325 (1%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLG-RSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
+++ AL AL Q+ +FGKGS M LG + VT HV V+ TGS ALD+ALG GGLP+GR+
Sbjct: 13 AQRQAALNTALAQVEKAFGKGSAMRLGDKPVT--HVEVIPTGSLALDMALGIGGLPRGRI 70
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
VEI+GPE+SGKTT+ALH +A AQR GG FIDAEHALDP A +GV T++L+++QPD
Sbjct: 71 VEIFGPESSGKTTIALHAVANAQRNGGVAAFIDAEHALDPEYARNLGVDTDSLIISQPDN 130
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + D LIRSG++D++V+DSVAALVPK E+DGEMGD H+ +QARLMSQALRK++ +
Sbjct: 131 GEQALEIADMLIRSGALDIIVIDSVAALVPKAEIDGEMGDNHVGLQARLMSQALRKMTGA 190
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
LS S T +FINQ+R K+ FG P E T GG ALKFYASVRL+I+R+ +K G+E IG
Sbjct: 191 LSQSHTTAVFINQLREKIGVM-FGNP-ETTTGGKALKFYASVRLDIRRVQTLKNGDEAIG 248
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNF 299
++ VK+VKNK+APPFK+A+F++ +G+G+SRE IID+AL K+G+ FTY+ D+
Sbjct: 249 NRTRVKVVKNKMAPPFKSAEFDILYGEGVSREGSIIDMALSTGIIKKSGSWFTYDGDQLG 308
Query: 300 RGKEAFKQFLVENESVREELVIKLR 324
+G+E +QFL +N + EL K++
Sbjct: 309 QGRERVRQFLKDNPELETELETKIK 333
>gi|262277415|ref|ZP_06055208.1| protein RecA [alpha proteobacterium HIMB114]
gi|262224518|gb|EEY74977.1| protein RecA [alpha proteobacterium HIMB114]
Length = 376
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 183/322 (56%), Positives = 241/322 (74%), Gaps = 3/322 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ A+ QI +FGKGS+M LG+ + +STGS +LDIALG GGLPK R+VEI
Sbjct: 19 KQKALEAAIGQIDQNFGKGSVMKLGQKDQALDIEAISTGSLSLDIALGIGGLPKSRIVEI 78
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL VIAEAQ+ GG C F+DAEHALDP+ A +GV T LL++QPD GEQ
Sbjct: 79 YGPESSGKTTLALQVIAEAQKTGGVCAFVDAEHALDPTYARKLGVDTSELLISQPDTGEQ 138
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+V V+VVDSVAAL P+ EL+G+MGD H+ +QARLMSQALRKL+ S+S
Sbjct: 139 ALEIADTLVRSGAVSVLVVDSVAALTPRAELEGDMGDTHVGLQARLMSQALRKLTGSISK 198
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ FG P E T GGNALKFY+SVR++I+RIG +K+ +E IG+Q
Sbjct: 199 SNTMVIFINQIRMKIGVM-FGSP-ETTAGGNALKFYSSVRMDIRRIGAIKEKDEIIGNQT 256
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+GIS+ E+IDL K K+GA ++Y +GK
Sbjct: 257 RVKVVKNKVAPPFKVVEFDIMYGEGISKMGELIDLGAKANIIEKSGAWYSYKGEKIGQGK 316
Query: 303 EAFKQFLVENESVREELVIKLR 324
E KQ+L N ++ E+ + +R
Sbjct: 317 ENAKQYLKNNLNIAAEIEMAIR 338
>gi|207366280|emb|CAQ58035.1| recombinase A [Agrobacterium tumefaciens]
gi|207366286|emb|CAQ58038.1| recombinase A [Agrobacterium tumefaciens]
Length = 323
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/317 (58%), Positives = 240/317 (75%), Gaps = 3/317 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI SFGKGSIM LG + V VSTGS +LDIALG GGLPKGR++EI
Sbjct: 5 KSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGRIIEI 64
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL IAEAQ++GG C F+DAEHALDP A +GV ++LL++QPD GEQ
Sbjct: 65 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQSLLISQPDTGEQ 124
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 125 ALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 184
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+ ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+ EE +G+Q
Sbjct: 185 SKCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAVKEREEVVGNQT 242
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 243 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQGR 302
Query: 303 EAFKQFLVENESVREEL 319
E K FL +N E+
Sbjct: 303 ENAKTFLRDNPDTANEI 319
>gi|296129392|ref|YP_003636642.1| recA protein [Cellulomonas flavigena DSM 20109]
gi|296021207|gb|ADG74443.1| recA protein [Cellulomonas flavigena DSM 20109]
Length = 346
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 188/328 (57%), Positives = 250/328 (76%), Gaps = 6/328 (1%)
Query: 7 ALQQALDQITSSFGKGSIMWLG-RSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYG 65
AL+ AL QI FGKGS+M LG P V V+ TGS ALD+ALG GGLP+GR++E+YG
Sbjct: 10 ALEAALSQIDRQFGKGSVMRLGDEGRAP--VEVIPTGSIALDVALGIGGLPRGRIIEVYG 67
Query: 66 PEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQAL 125
PE+SGKTT+ALH +A AQR GG FIDAEHALDP A+ +GV T+ LL++QPD GEQAL
Sbjct: 68 PESSGKTTVALHAVANAQRAGGIAAFIDAEHALDPEYAKKLGVDTDALLVSQPDNGEQAL 127
Query: 126 SLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQ 185
++DTLIRSG++D++V+DSVAALVPK E++GEMGD+H+ +QARLMSQALRK++ +L+ S
Sbjct: 128 EIMDTLIRSGAIDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITGALNASG 187
Query: 186 TILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAV 245
T IFINQ+R K+ F FG P E T GG ALKFYASVR++I+RI +K+G E +G++ V
Sbjct: 188 TTAIFINQLREKIGVF-FGSP-ETTTGGKALKFYASVRMDIRRIETLKEGTEPVGNRTRV 245
Query: 246 KIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRGKEA 304
K+VKNK+APPFK A+F++ +G GISRE +ID+ ++H F K+GA FTY D+ +GKE
Sbjct: 246 KVVKNKMAPPFKQAEFDILYGVGISREGSLIDMGVEHGFVRKSGAWFTYEGDQLGQGKEN 305
Query: 305 FKQFLVENESVREELVIKLREKLVVDHK 332
++FL +N + EL K++EKL + K
Sbjct: 306 ARKFLRDNPDLANELDKKIKEKLGIGAK 333
>gi|207366350|emb|CAQ58070.1| recombinase A [Agrobacterium tumefaciens]
Length = 316
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/314 (59%), Positives = 238/314 (75%), Gaps = 3/314 (0%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL+ AL QI SFGKGSIM LG + V VSTGS +LDIALG GGLPKGR+VEIYGP
Sbjct: 2 ALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGRIVEIYGP 61
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTTLAL IAEAQ++GG C F+DAEHALDP A +GV + LL++QPD GEQAL
Sbjct: 62 ESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQGLLISQPDTGEQALE 121
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ DTL+RSG+VDV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S S+
Sbjct: 122 ITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISKSKC 181
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+ EE +G+Q VK
Sbjct: 182 MVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAVKEREEVVGNQTRVK 239
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGKEAF 305
+VKNK+APPFK +F++ +G+G+S+ E++DL +K K+GA F+YN + +G+E
Sbjct: 240 VVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQGRENA 299
Query: 306 KQFLVENESVREEL 319
K FL +N E+
Sbjct: 300 KTFLRDNPETANEI 313
>gi|444436564|gb|AGE09650.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436568|gb|AGE09652.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436570|gb|AGE09653.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436572|gb|AGE09654.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436576|gb|AGE09656.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436578|gb|AGE09657.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436580|gb|AGE09658.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436582|gb|AGE09659.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436584|gb|AGE09660.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436586|gb|AGE09661.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436588|gb|AGE09662.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436590|gb|AGE09663.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436592|gb|AGE09664.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436594|gb|AGE09665.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436596|gb|AGE09666.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436598|gb|AGE09667.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436600|gb|AGE09668.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436602|gb|AGE09669.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436606|gb|AGE09671.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436608|gb|AGE09672.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436610|gb|AGE09673.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436612|gb|AGE09674.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436614|gb|AGE09675.1| recombinase A, partial [Agrobacterium tumefaciens]
Length = 323
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/317 (58%), Positives = 239/317 (75%), Gaps = 3/317 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI SFGKGSIM LG + V VSTGS +LDIALG GGLPKGR+VEI
Sbjct: 5 KSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGRIVEI 64
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL IAEAQ++GG C F+DAEHALDP A +GV + LL++QPD GEQ
Sbjct: 65 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQGLLISQPDTGEQ 124
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 125 ALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 184
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+ ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+ EE +G+Q
Sbjct: 185 SKCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAVKEREEVVGNQT 242
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 243 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQGR 302
Query: 303 EAFKQFLVENESVREEL 319
E K FL +N E+
Sbjct: 303 ENAKTFLRDNPETANEI 319
>gi|329296671|ref|ZP_08254007.1| recombinase A [Plautia stali symbiont]
Length = 356
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/326 (57%), Positives = 243/326 (74%), Gaps = 4/326 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VEI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVEI 65
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A+ +GV +NLL +QPD GEQ
Sbjct: 66 YGPESSGKTTLTLQVIAAAQRKGKTCAFIDAEHALDPVYAKKLGVDIDNLLCSQPDTGEQ 125
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L RSG+VDV++VDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 126 ALEICDALARSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLKQ 185
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T+LIFINQ+R K+ FG P E T GG+ALKFYASVRL+I+RIG +K+G+E +GS+
Sbjct: 186 SNTLLIFINQIRMKIGVM-FGNP-ETTTGGHALKFYASVRLDIRRIGAIKEGDEVVGSET 243
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGK 302
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +KHK KAGA ++YN D+ +GK
Sbjct: 244 RVKVVKNKVAAPFKQAEFQIMYGEGINTFGELVDLGVKHKLVEKAGAWYSYNGDKIGQGK 303
Query: 303 EAFKQFLVENESVREELVIKLREKLV 328
FL EN ++ EL +KLR+ L+
Sbjct: 304 ANATNFLKENPAIANELDVKLRDMLL 329
>gi|444299284|emb|CCP29591.1| recombinase A, partial [Agrobacterium genomosp. 7]
gi|444299286|emb|CCP29592.1| recombinase A, partial [Agrobacterium genomosp. 7]
Length = 319
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/321 (58%), Positives = 241/321 (75%), Gaps = 3/321 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI SFGKGSIM LG + V VSTGS +LDIALG GGLPKGR++EI
Sbjct: 1 KSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGRIIEI 60
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL IAEAQ++GG C F+DAEHALDP A +GV + LL++QPD GEQ
Sbjct: 61 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQGLLISQPDTGEQ 120
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 121 ALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 180
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+ ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+ EE +G+Q
Sbjct: 181 SKCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSVKEREEVVGNQT 238
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 239 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQGR 298
Query: 303 EAFKQFLVENESVREELVIKL 323
E K FL +N E+ + L
Sbjct: 299 ENAKMFLRDNPETANEIELAL 319
>gi|409400599|ref|ZP_11250623.1| recombinase A [Acidocella sp. MX-AZ02]
gi|409130485|gb|EKN00250.1| recombinase A [Acidocella sp. MX-AZ02]
Length = 364
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/331 (54%), Positives = 247/331 (74%), Gaps = 7/331 (2%)
Query: 1 MSKKDLALQQALD----QITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLP 56
M+K DL +ALD QI +FGKGSIM +G + V+S+GS LD+ALG GGLP
Sbjct: 16 MAKPDLEKNKALDAAMAQIERAFGKGSIMRMGAKGGNEAIEVISSGSLGLDLALGIGGLP 75
Query: 57 KGRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLA 116
+GRV+EIYGPE+SGKTTLALH +AEAQ++GG C F+DAEHALDP A +GV +NLL++
Sbjct: 76 RGRVIEIYGPESSGKTTLALHAVAEAQKRGGVCAFVDAEHALDPIYARKLGVDVDNLLIS 135
Query: 117 QPDCGEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRK 176
QPD GEQ L + DTL+RSGS+DV+V+DSVAALVP+ EL+GEMGD+H+ + ARLMSQALRK
Sbjct: 136 QPDTGEQGLEIADTLVRSGSIDVLVIDSVAALVPRAELEGEMGDSHVGLHARLMSQALRK 195
Query: 177 LSHSLSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGE 236
++ S++ S T LIF+NQ+R K+ FG P E T GGNALKFY+S+R+ I+R G +K+ +
Sbjct: 196 ITGSVARSNTTLIFLNQIRLKIGVM-FGNP-ETTTGGNALKFYSSIRMEIRRTGSIKERD 253
Query: 237 ETIGSQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYND 296
E G+ + VK+VKNKLAPPF+ +F++ FG+GIS+ E++DL +K K+GA F+Y+
Sbjct: 254 EVTGNHVRVKVVKNKLAPPFRQVEFDIMFGEGISKSGELVDLGVKAGVVEKSGAWFSYDS 313
Query: 297 RNF-RGKEAFKQFLVENESVREELVIKLREK 326
+ +G+E KQFL +N V E + K+R++
Sbjct: 314 QRIGQGRENAKQFLRDNPKVAESIEKKIRDQ 344
>gi|340779200|ref|ZP_08699143.1| recA protein [Acetobacter aceti NBRC 14818]
Length = 343
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/324 (57%), Positives = 246/324 (75%), Gaps = 4/324 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI +FGKGSIM LG+ +STGS LDIALG GG+P+GR+VEI
Sbjct: 5 KTKALEGALSQIERAFGKGSIMRLGQR-PKEEADAISTGSLGLDIALGIGGMPRGRIVEI 63
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH+IAEAQ++GG C FIDAEHALDP A +GV +NLL++QPD GEQ
Sbjct: 64 YGPESSGKTTLALHIIAEAQKKGGTCAFIDAEHALDPGYARKLGVDVDNLLISQPDAGEQ 123
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+VVDSVAALVP+ EL+G+MGD+H+ + ARLMSQALRKL+ ++S
Sbjct: 124 ALEIADTLVRSGAVDVLVVDSVAALVPRAELEGDMGDSHVGLHARLMSQALRKLTGTVSR 183
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T+L+F+NQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K +E +G+Q
Sbjct: 184 SNTLLVFLNQIRLKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGSIKDKDEVVGNQT 241
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGK 302
VK+VKNK+APPF+ +F++ +G+GIS+ E+IDL +K K+GA F+Y+ R +G+
Sbjct: 242 RVKVVKNKMAPPFRQVEFDIMYGEGISKMGELIDLGVKAGVVEKSGAWFSYDSQRVGQGR 301
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E K FL E+ + + ++RE+
Sbjct: 302 ENAKNFLREHPEMAHAIEHRIREQ 325
>gi|319404396|emb|CBI77999.1| RecA protein [Bartonella rochalimae ATCC BAA-1498]
Length = 347
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 190/324 (58%), Positives = 239/324 (73%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI SFGKGSIM LG+ + VSTGS +LDIALG GGLPKGR++EI
Sbjct: 3 KTKALEAALSQIERSFGKGSIMRLGQKEQVVEIETVSTGSLSLDIALGVGGLPKGRIIEI 62
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH IAEAQ+ GG C F+DAEHALDP A +GV NL ++QPD GEQ
Sbjct: 63 YGPESSGKTTLALHSIAEAQKNGGVCAFVDAEHALDPIYARKLGVDLANLFISQPDTGEQ 122
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + +TL+RSG+VDV+VVDSVAAL P+ E+DGEMGD+ +QARLMSQALRKL+ S+
Sbjct: 123 ALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDSLPGLQARLMSQALRKLTASIFR 182
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K + IGSQ
Sbjct: 183 SNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAIKDRDTIIGSQT 240
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VKIVKNKLAPPFK +F++ +G+GIS+ E+IDL +K K+G+ F+YN + +G+
Sbjct: 241 RVKIVKNKLAPPFKQVEFDIIYGEGISKLGELIDLGVKVGLVEKSGSWFSYNSQRLGQGR 300
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E KQFL E+ + E+ LR+
Sbjct: 301 ENAKQFLCEHTEIAAEIETALRQN 324
>gi|283481767|emb|CBA10138.1| recombinase A [Agrobacterium tumefaciens]
Length = 317
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/314 (59%), Positives = 238/314 (75%), Gaps = 3/314 (0%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL+ AL QI SFGKGSIM LG + V VSTGS +LDIALG GGLPKGR+VEIYGP
Sbjct: 3 ALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGRIVEIYGP 62
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTTLAL IAEAQ++GG C F+DAEHALDP A +GV + LL++QPD GEQAL
Sbjct: 63 ESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQGLLISQPDTGEQALE 122
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ DTL+RSG+VDV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S S+
Sbjct: 123 ITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISKSKC 182
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+ EE +G+Q VK
Sbjct: 183 MVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAVKEREEVVGNQTRVK 240
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGKEAF 305
+VKNK+APPFK +F++ +G+G+S+ E++DL +K K+GA F+YN + +G+E
Sbjct: 241 VVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQGRENA 300
Query: 306 KQFLVENESVREEL 319
K FL +N E+
Sbjct: 301 KTFLRDNPETANEI 314
>gi|384217676|ref|YP_005608842.1| recombinase A [Bradyrhizobium japonicum USDA 6]
gi|354956575|dbj|BAL09254.1| RecA protein [Bradyrhizobium japonicum USDA 6]
Length = 362
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/345 (55%), Positives = 248/345 (71%), Gaps = 5/345 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGS+M LG++ V VS+GS LDIALG GGLPKGRVVEI
Sbjct: 16 KSKALAAALSQIERQFGKGSVMKLGKNDRSMDVEAVSSGSLGLDIALGIGGLPKGRVVEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH +AEAQ++GG C FIDAEHALDP A +GV + LL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+VVDSVAALVPK EL+GEMGDA +QARLMSQALRKL+ S++
Sbjct: 136 ALEICDTLVRSGAVDVLVVDSVAALVPKAELEGEMGDALPGLQARLMSQALRKLTASINK 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ +G P E T GGNALKFYASVRL+I+RIG +K+ +E +G+
Sbjct: 196 SNTMVIFINQIRMKIGVM-YGSP-ETTTGGNALKFYASVRLDIRRIGAIKERDEVVGNTT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G+G+S+ EI+DL +K K+GA F+Y+ + +G+
Sbjct: 254 RVKVVKNKLAPPFKQVEFDIMYGEGVSKMGEILDLGVKAGIVEKSGAWFSYDSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK--LVVDHKEPQTAVTDEDSTE 345
E K FL N + ++ +R+ L+ + T D D E
Sbjct: 314 ENSKAFLKANPDITAKIETSIRQNSGLIAEQILAGTPERDADGEE 358
>gi|22124791|ref|NP_668214.1| recombinase A [Yersinia pestis KIM10+]
gi|45440236|ref|NP_991775.1| recombinase A [Yersinia pestis biovar Microtus str. 91001]
gi|108808829|ref|YP_652745.1| recombinase A [Yersinia pestis Antiqua]
gi|108810952|ref|YP_646719.1| recombinase A [Yersinia pestis Nepal516]
gi|153997646|ref|ZP_02022746.1| RecA protein [Yersinia pestis CA88-4125]
gi|162419049|ref|YP_001605468.1| recombinase A [Yersinia pestis Angola]
gi|165925676|ref|ZP_02221508.1| protein RecA [Yersinia pestis biovar Orientalis str. F1991016]
gi|165936616|ref|ZP_02225183.1| protein RecA [Yersinia pestis biovar Orientalis str. IP275]
gi|166010064|ref|ZP_02230962.1| protein RecA [Yersinia pestis biovar Antiqua str. E1979001]
gi|166212913|ref|ZP_02238948.1| protein RecA [Yersinia pestis biovar Antiqua str. B42003004]
gi|167399039|ref|ZP_02304563.1| protein RecA [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167421670|ref|ZP_02313423.1| protein RecA [Yersinia pestis biovar Orientalis str. MG05-1020]
gi|167423840|ref|ZP_02315593.1| protein RecA [Yersinia pestis biovar Mediaevalis str. K1973002]
gi|167467646|ref|ZP_02332350.1| protein RecA [Yersinia pestis FV-1]
gi|170025590|ref|YP_001722095.1| recombinase A [Yersinia pseudotuberculosis YPIII]
gi|218930328|ref|YP_002348203.1| recombinase A [Yersinia pestis CO92]
gi|229838927|ref|ZP_04459086.1| DNA strand exchange and recombination protein with protease and
nuclease activity [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229896408|ref|ZP_04511576.1| DNA strand exchange and recombination protein with protease and
nuclease activity [Yersinia pestis Pestoides A]
gi|229899494|ref|ZP_04514635.1| DNA strand exchange and recombination protein with protease and
nuclease activity [Yersinia pestis biovar Orientalis
str. India 195]
gi|229901168|ref|ZP_04516291.1| DNA strand exchange and recombination protein with protease and
nuclease activity [Yersinia pestis Nepal516]
gi|270489351|ref|ZP_06206425.1| RecA protein [Yersinia pestis KIM D27]
gi|294505019|ref|YP_003569081.1| recombinase A [Yersinia pestis Z176003]
gi|384123486|ref|YP_005506106.1| recombinase A [Yersinia pestis D106004]
gi|384127344|ref|YP_005509958.1| recombinase A [Yersinia pestis D182038]
gi|384138847|ref|YP_005521549.1| recombinase A [Yersinia pestis A1122]
gi|384415997|ref|YP_005625359.1| DNA strand exchange and recombination protein [Yersinia pestis
biovar Medievalis str. Harbin 35]
gi|420548420|ref|ZP_15046230.1| protein RecA [Yersinia pestis PY-01]
gi|420553743|ref|ZP_15050978.1| protein RecA [Yersinia pestis PY-02]
gi|420559348|ref|ZP_15055850.1| protein RecA [Yersinia pestis PY-03]
gi|420564735|ref|ZP_15060687.1| protein RecA [Yersinia pestis PY-04]
gi|420569782|ref|ZP_15065271.1| protein RecA [Yersinia pestis PY-05]
gi|420575446|ref|ZP_15070396.1| protein RecA [Yersinia pestis PY-06]
gi|420580765|ref|ZP_15075234.1| protein RecA [Yersinia pestis PY-07]
gi|420586109|ref|ZP_15080073.1| protein RecA [Yersinia pestis PY-08]
gi|420591220|ref|ZP_15084668.1| protein RecA [Yersinia pestis PY-09]
gi|420596598|ref|ZP_15089503.1| protein RecA [Yersinia pestis PY-10]
gi|420602274|ref|ZP_15094552.1| protein RecA [Yersinia pestis PY-11]
gi|420607697|ref|ZP_15099459.1| protein RecA [Yersinia pestis PY-12]
gi|420613091|ref|ZP_15104296.1| protein RecA [Yersinia pestis PY-13]
gi|420618473|ref|ZP_15108982.1| protein RecA [Yersinia pestis PY-14]
gi|420623774|ref|ZP_15113765.1| protein RecA [Yersinia pestis PY-15]
gi|420628865|ref|ZP_15118385.1| protein RecA [Yersinia pestis PY-16]
gi|420633974|ref|ZP_15122960.1| protein RecA [Yersinia pestis PY-19]
gi|420639185|ref|ZP_15127652.1| protein RecA [Yersinia pestis PY-25]
gi|420644670|ref|ZP_15132659.1| protein RecA [Yersinia pestis PY-29]
gi|420649938|ref|ZP_15137417.1| protein RecA [Yersinia pestis PY-32]
gi|420655590|ref|ZP_15142495.1| protein RecA [Yersinia pestis PY-34]
gi|420661086|ref|ZP_15147412.1| protein RecA [Yersinia pestis PY-36]
gi|420666370|ref|ZP_15152170.1| protein RecA [Yersinia pestis PY-42]
gi|420671235|ref|ZP_15156605.1| protein RecA [Yersinia pestis PY-45]
gi|420676573|ref|ZP_15161459.1| protein RecA [Yersinia pestis PY-46]
gi|420682203|ref|ZP_15166543.1| protein RecA [Yersinia pestis PY-47]
gi|420687535|ref|ZP_15171281.1| protein RecA [Yersinia pestis PY-48]
gi|420698519|ref|ZP_15180932.1| protein RecA [Yersinia pestis PY-53]
gi|420704381|ref|ZP_15185585.1| protein RecA [Yersinia pestis PY-54]
gi|420709713|ref|ZP_15190334.1| protein RecA [Yersinia pestis PY-55]
gi|420715176|ref|ZP_15195186.1| protein RecA [Yersinia pestis PY-56]
gi|420720688|ref|ZP_15199909.1| protein RecA [Yersinia pestis PY-58]
gi|420726155|ref|ZP_15204723.1| protein RecA [Yersinia pestis PY-59]
gi|420731749|ref|ZP_15209753.1| protein RecA [Yersinia pestis PY-60]
gi|420736754|ref|ZP_15214274.1| protein RecA [Yersinia pestis PY-61]
gi|420742230|ref|ZP_15219195.1| protein RecA [Yersinia pestis PY-63]
gi|420747961|ref|ZP_15224038.1| protein RecA [Yersinia pestis PY-64]
gi|420753386|ref|ZP_15228885.1| protein RecA [Yersinia pestis PY-65]
gi|420759188|ref|ZP_15233545.1| protein RecA [Yersinia pestis PY-66]
gi|420764441|ref|ZP_15238165.1| protein RecA [Yersinia pestis PY-71]
gi|420769674|ref|ZP_15242859.1| protein RecA [Yersinia pestis PY-72]
gi|420774653|ref|ZP_15247369.1| protein RecA [Yersinia pestis PY-76]
gi|420780292|ref|ZP_15252334.1| protein RecA [Yersinia pestis PY-88]
gi|420785871|ref|ZP_15257205.1| protein RecA [Yersinia pestis PY-89]
gi|420791006|ref|ZP_15261821.1| protein RecA [Yersinia pestis PY-90]
gi|420796527|ref|ZP_15266786.1| protein RecA [Yersinia pestis PY-91]
gi|420801594|ref|ZP_15271339.1| protein RecA [Yersinia pestis PY-92]
gi|420806941|ref|ZP_15276182.1| protein RecA [Yersinia pestis PY-93]
gi|420812324|ref|ZP_15281014.1| protein RecA [Yersinia pestis PY-94]
gi|420817832|ref|ZP_15285997.1| protein RecA [Yersinia pestis PY-95]
gi|420823126|ref|ZP_15290742.1| protein RecA [Yersinia pestis PY-96]
gi|420828209|ref|ZP_15295311.1| protein RecA [Yersinia pestis PY-98]
gi|420833906|ref|ZP_15300459.1| protein RecA [Yersinia pestis PY-99]
gi|420838758|ref|ZP_15304841.1| protein RecA [Yersinia pestis PY-100]
gi|420843954|ref|ZP_15309558.1| protein RecA [Yersinia pestis PY-101]
gi|420849619|ref|ZP_15314641.1| protein RecA [Yersinia pestis PY-102]
gi|420855289|ref|ZP_15319437.1| protein RecA [Yersinia pestis PY-103]
gi|420860478|ref|ZP_15324012.1| protein RecA [Yersinia pestis PY-113]
gi|421764810|ref|ZP_16201598.1| recombinase A [Yersinia pestis INS]
gi|17380548|sp|P37858.4|RECA_YERPE RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|122979436|sp|Q1C422.1|RECA_YERPA RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|123373418|sp|Q1CLL1.1|RECA_YERPN RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|238687266|sp|A9R0V9.1|RECA_YERPG RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|238688430|sp|B1JJA2.1|RECA_YERPY RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|21957615|gb|AAM84465.1|AE013691_4 DNA-dependent ATPase, DNA- and ATP-dependent coprotease [Yersinia
pestis KIM10+]
gi|45435092|gb|AAS60652.1| RecA protein [Yersinia pestis biovar Microtus str. 91001]
gi|108774600|gb|ABG17119.1| RecA protein [Yersinia pestis Nepal516]
gi|108780742|gb|ABG14800.1| RecA protein [Yersinia pestis Antiqua]
gi|115348939|emb|CAL21898.1| RecA protein [Yersinia pestis CO92]
gi|149289283|gb|EDM39363.1| RecA protein [Yersinia pestis CA88-4125]
gi|162351864|gb|ABX85812.1| protein RecA [Yersinia pestis Angola]
gi|165915265|gb|EDR33875.1| protein RecA [Yersinia pestis biovar Orientalis str. IP275]
gi|165922288|gb|EDR39465.1| protein RecA [Yersinia pestis biovar Orientalis str. F1991016]
gi|165990971|gb|EDR43272.1| protein RecA [Yersinia pestis biovar Antiqua str. E1979001]
gi|166205700|gb|EDR50180.1| protein RecA [Yersinia pestis biovar Antiqua str. B42003004]
gi|166960589|gb|EDR56610.1| protein RecA [Yersinia pestis biovar Orientalis str. MG05-1020]
gi|167051543|gb|EDR62951.1| protein RecA [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167058010|gb|EDR67756.1| protein RecA [Yersinia pestis biovar Mediaevalis str. K1973002]
gi|169752124|gb|ACA69642.1| recA protein [Yersinia pseudotuberculosis YPIII]
gi|229681893|gb|EEO77986.1| DNA strand exchange and recombination protein with protease and
nuclease activity [Yersinia pestis Nepal516]
gi|229686986|gb|EEO79061.1| DNA strand exchange and recombination protein with protease and
nuclease activity [Yersinia pestis biovar Orientalis
str. India 195]
gi|229695293|gb|EEO85340.1| DNA strand exchange and recombination protein with protease and
nuclease activity [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229700482|gb|EEO88513.1| DNA strand exchange and recombination protein with protease and
nuclease activity [Yersinia pestis Pestoides A]
gi|262363082|gb|ACY59803.1| recombinase A [Yersinia pestis D106004]
gi|262367008|gb|ACY63565.1| recombinase A [Yersinia pestis D182038]
gi|270337855|gb|EFA48632.1| RecA protein [Yersinia pestis KIM D27]
gi|294355478|gb|ADE65819.1| recombinase A [Yersinia pestis Z176003]
gi|320016501|gb|ADW00073.1| DNA strand exchange and recombination protein with protease and
nuclease activity [Yersinia pestis biovar Medievalis
str. Harbin 35]
gi|342853976|gb|AEL72529.1| recombinase A [Yersinia pestis A1122]
gi|391423004|gb|EIQ85532.1| protein RecA [Yersinia pestis PY-01]
gi|391423130|gb|EIQ85641.1| protein RecA [Yersinia pestis PY-02]
gi|391423354|gb|EIQ85846.1| protein RecA [Yersinia pestis PY-03]
gi|391437972|gb|EIQ98776.1| protein RecA [Yersinia pestis PY-04]
gi|391439113|gb|EIQ99801.1| protein RecA [Yersinia pestis PY-05]
gi|391442897|gb|EIR03264.1| protein RecA [Yersinia pestis PY-06]
gi|391454854|gb|EIR14023.1| protein RecA [Yersinia pestis PY-07]
gi|391455735|gb|EIR14829.1| protein RecA [Yersinia pestis PY-08]
gi|391457724|gb|EIR16645.1| protein RecA [Yersinia pestis PY-09]
gi|391470722|gb|EIR28363.1| protein RecA [Yersinia pestis PY-10]
gi|391471990|gb|EIR29496.1| protein RecA [Yersinia pestis PY-11]
gi|391473066|gb|EIR30475.1| protein RecA [Yersinia pestis PY-12]
gi|391486802|gb|EIR42805.1| protein RecA [Yersinia pestis PY-13]
gi|391488357|gb|EIR44212.1| protein RecA [Yersinia pestis PY-15]
gi|391488379|gb|EIR44233.1| protein RecA [Yersinia pestis PY-14]
gi|391502756|gb|EIR57019.1| protein RecA [Yersinia pestis PY-16]
gi|391502960|gb|EIR57204.1| protein RecA [Yersinia pestis PY-19]
gi|391508037|gb|EIR61816.1| protein RecA [Yersinia pestis PY-25]
gi|391518725|gb|EIR71421.1| protein RecA [Yersinia pestis PY-29]
gi|391520117|gb|EIR72698.1| protein RecA [Yersinia pestis PY-34]
gi|391521132|gb|EIR73625.1| protein RecA [Yersinia pestis PY-32]
gi|391533182|gb|EIR84488.1| protein RecA [Yersinia pestis PY-36]
gi|391536188|gb|EIR87200.1| protein RecA [Yersinia pestis PY-42]
gi|391538663|gb|EIR89453.1| protein RecA [Yersinia pestis PY-45]
gi|391551645|gb|EIS01138.1| protein RecA [Yersinia pestis PY-46]
gi|391551768|gb|EIS01253.1| protein RecA [Yersinia pestis PY-47]
gi|391552214|gb|EIS01659.1| protein RecA [Yersinia pestis PY-48]
gi|391567711|gb|EIS15543.1| protein RecA [Yersinia pestis PY-53]
gi|391571988|gb|EIS19274.1| protein RecA [Yersinia pestis PY-54]
gi|391581001|gb|EIS26931.1| protein RecA [Yersinia pestis PY-55]
gi|391583085|gb|EIS28783.1| protein RecA [Yersinia pestis PY-56]
gi|391593623|gb|EIS37901.1| protein RecA [Yersinia pestis PY-58]
gi|391596684|gb|EIS40594.1| protein RecA [Yersinia pestis PY-60]
gi|391597726|gb|EIS41524.1| protein RecA [Yersinia pestis PY-59]
gi|391611025|gb|EIS53244.1| protein RecA [Yersinia pestis PY-61]
gi|391611548|gb|EIS53713.1| protein RecA [Yersinia pestis PY-63]
gi|391614333|gb|EIS56212.1| protein RecA [Yersinia pestis PY-64]
gi|391624264|gb|EIS64926.1| protein RecA [Yersinia pestis PY-65]
gi|391628642|gb|EIS68681.1| protein RecA [Yersinia pestis PY-66]
gi|391634854|gb|EIS74080.1| protein RecA [Yersinia pestis PY-71]
gi|391636882|gb|EIS75869.1| protein RecA [Yersinia pestis PY-72]
gi|391647032|gb|EIS84713.1| protein RecA [Yersinia pestis PY-76]
gi|391650479|gb|EIS87761.1| protein RecA [Yersinia pestis PY-88]
gi|391654858|gb|EIS91657.1| protein RecA [Yersinia pestis PY-89]
gi|391659862|gb|EIS96091.1| protein RecA [Yersinia pestis PY-90]
gi|391667470|gb|EIT02801.1| protein RecA [Yersinia pestis PY-91]
gi|391676899|gb|EIT11259.1| protein RecA [Yersinia pestis PY-93]
gi|391677596|gb|EIT11889.1| protein RecA [Yersinia pestis PY-92]
gi|391678070|gb|EIT12322.1| protein RecA [Yersinia pestis PY-94]
gi|391690994|gb|EIT23965.1| protein RecA [Yersinia pestis PY-95]
gi|391693809|gb|EIT26523.1| protein RecA [Yersinia pestis PY-96]
gi|391695346|gb|EIT27924.1| protein RecA [Yersinia pestis PY-98]
gi|391707923|gb|EIT39225.1| protein RecA [Yersinia pestis PY-99]
gi|391711016|gb|EIT42016.1| protein RecA [Yersinia pestis PY-100]
gi|391711872|gb|EIT42797.1| protein RecA [Yersinia pestis PY-101]
gi|391723864|gb|EIT53499.1| protein RecA [Yersinia pestis PY-102]
gi|391724583|gb|EIT54147.1| protein RecA [Yersinia pestis PY-103]
gi|391727314|gb|EIT56553.1| protein RecA [Yersinia pestis PY-113]
gi|411174361|gb|EKS44394.1| recombinase A [Yersinia pestis INS]
Length = 356
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/350 (56%), Positives = 251/350 (71%), Gaps = 8/350 (2%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A+ +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV++VDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK G+ +GS+
Sbjct: 185 NANTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKDGDVVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +KHK KAGA ++YN D+ +G
Sbjct: 243 TRVKVVKNKIAAPFKQAEFQILYGEGININGELVDLGVKHKLIEKAGAWYSYNGDKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVV--DHKEPQTAVTDE--DSTEET 347
K +L EN ++ EL KLRE L+ + ++P A T E D +ET
Sbjct: 303 KANASNYLKENPAIAAELDKKLREMLLNGGNGEQPVAAATAEFADGADET 352
>gi|239787275|emb|CAX83753.1| RecA bacterial DNA recombination protein [uncultured bacterium]
Length = 348
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/323 (57%), Positives = 248/323 (76%), Gaps = 4/323 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
+++ AL+ A+ QI FGKG+IM + +T VPVVSTGS LDIALG GGLP+GRVVE
Sbjct: 6 EREKALEAAIGQIERQFGKGAIMRMDGDITV-DVPVVSTGSLGLDIALGIGGLPRGRVVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPEASGKTTLALHV AE QR GG F+DAEHALDP+ A +GVK + LLL+QPD GE
Sbjct: 65 IYGPEASGKTTLALHVAAEVQRVGGVAAFVDAEHALDPAYARKLGVKVDQLLLSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
Q L + D L+RSG+VD+VVVDSVAAL PK E++G+MGD+H+ +QARLMSQALRKL+ S+S
Sbjct: 125 QGLEITDMLVRSGAVDLVVVDSVAALTPKAEIEGDMGDSHVGLQARLMSQALRKLTGSIS 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S+ I++FINQ+R K+ FG P E T GGNALKFYASVRL+I+R +K+ +E +G+
Sbjct: 185 RSKAIVLFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRNAPIKEKDEVVGNH 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRG 301
VK+VKNKLAPPF++A+F++ +G+GIS E EI+D+ ++ K K+GA ++Y +R +G
Sbjct: 243 CKVKVVKNKLAPPFRSAEFDITYGEGISLEGEILDMGVEEKLVEKSGAWYSYEGERIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLR 324
+E K+FL++N ++R L +LR
Sbjct: 303 REIAKRFLMDNPAMRNTLEDRLR 325
>gi|50122291|ref|YP_051458.1| recombinase A [Pectobacterium atrosepticum SCRI1043]
gi|59798238|sp|Q6D1S8.1|RECA_ERWCT RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|49612817|emb|CAG76267.1| RecA protein (recombinase A) [Pectobacterium atrosepticum SCRI1043]
Length = 357
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/347 (56%), Positives = 248/347 (71%), Gaps = 10/347 (2%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VEI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVEI 65
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A+ +GV +NLL +QPD GEQ
Sbjct: 66 YGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGEQ 125
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L RSG+VDV++VDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 126 ALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLKQ 185
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
+ T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+R G +K+GEE +GS+
Sbjct: 186 ANTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRTGAIKEGEEVVGSET 243
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGK 302
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +KHK KAGA ++YN D+ +GK
Sbjct: 244 RVKVVKNKVAAPFKQAEFQILYGEGINIHGELVDLGVKHKLIEKAGAWYSYNGDKIGQGK 303
Query: 303 EAFKQFLVENESVREELVIKLREKLVVDHK----EPQTAVTDEDSTE 345
FL EN ++ EL KLRE L+ HK +P A D E
Sbjct: 304 ANACNFLKENPTISAELDKKLREMLL--HKGNELKPAAAGNSHDEDE 348
>gi|410084791|ref|ZP_11281512.1| RecA protein [Morganella morganii SC01]
gi|421494115|ref|ZP_15941467.1| RECA [Morganella morganii subsp. morganii KT]
gi|455738442|ref|YP_007504708.1| RecA protein [Morganella morganii subsp. morganii KT]
gi|400191672|gb|EJO24816.1| RECA [Morganella morganii subsp. morganii KT]
gi|409768436|gb|EKN52496.1| RecA protein [Morganella morganii SC01]
gi|455420005|gb|AGG30335.1| RecA protein [Morganella morganii subsp. morganii KT]
Length = 356
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 199/358 (55%), Positives = 250/358 (69%), Gaps = 9/358 (2%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS ALD+ALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLALDVALGAGGLPLGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQRQG C FIDAEHALDP A+ +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQRQGRVCAFIDAEHALDPVYAKKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV++VDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK G+E +GS+
Sbjct: 185 NSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKNGDEVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK+VKNK+A PFK A+F++ +G+GI+ E+IDL +KHK KAGA ++YN +G
Sbjct: 243 TRVKVVKNKVAAPFKQAEFQIMYGEGINTMGELIDLGVKHKLVEKAGAWYSYNGEKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETVSTISPDSTDEE 359
K +L E+ + +EL KLRE L+ E TA + ET D+ +EE
Sbjct: 303 KANATIYLKEHPEMADELDKKLRELLLNHSGEFSTAAESFNEESET-----EDAGNEE 355
>gi|188534791|ref|YP_001908588.1| recombinase A [Erwinia tasmaniensis Et1/99]
gi|238690917|sp|B2VHD6.1|RECA_ERWT9 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|188029833|emb|CAO97714.1| Recombinase A [Erwinia tasmaniensis Et1/99]
Length = 355
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 191/327 (58%), Positives = 242/327 (74%), Gaps = 4/327 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG T V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRT-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A+ +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQRKGKTCAFIDAEHALDPVYAKKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV++VDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALARSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+G+E +GS+
Sbjct: 185 NSGTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAIKEGDEVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +KHK KAGA ++YN D+ +G
Sbjct: 243 TRVKVVKNKVAAPFKQAEFQIMYGEGINIFGELVDLGVKHKLIEKAGAWYSYNGDKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLV 328
K FL EN ++ E+ KLRE L+
Sbjct: 303 KANAGNFLKENSAIANEIDAKLREMLL 329
>gi|160937429|ref|ZP_02084790.1| hypothetical protein CLOBOL_02320 [Clostridium bolteae ATCC
BAA-613]
gi|158439498|gb|EDP17248.1| hypothetical protein CLOBOL_02320 [Clostridium bolteae ATCC
BAA-613]
Length = 388
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 184/321 (57%), Positives = 244/321 (76%), Gaps = 3/321 (0%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL AL QI ++GKGS+M LG S ++ V TGS +LDIALG GG+PKGR+VE+YGP
Sbjct: 32 ALDAALTQIEKAYGKGSVMKLGDSRANMNIETVPTGSISLDIALGLGGVPKGRIVEVYGP 91
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTT+ALH++AE Q++GG FIDAEHALDP A IGV +NL ++QPD GEQAL
Sbjct: 92 ESSGKTTVALHMVAEVQKRGGIAGFIDAEHALDPVYARNIGVDIDNLYISQPDNGEQALE 151
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ +T++RSG+VD+V+VDSVAALVPK E+DGEMGD+H+ +QARLMSQALRKL+ +S S
Sbjct: 152 ITETMVRSGAVDIVIVDSVAALVPKAEIDGEMGDSHVGLQARLMSQALRKLTAVISKSNC 211
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
I+IFINQ+R K+ FG P E T GG ALKFYASVRL+++RI +K+G E G+++ VK
Sbjct: 212 IVIFINQLREKVGVM-FGNP-ETTTGGRALKFYASVRLDVRRIETLKQGGEVTGNRVRVK 269
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGKEAF 305
+VKNK+APPFK A+F++ FG+GIS+E +I+DLA+K K+GA F YN +G+E
Sbjct: 270 VVKNKIAPPFKEAEFDIMFGRGISKEGDILDLAVKENIIEKSGAWFAYNGSKIGQGRENS 329
Query: 306 KQFLVENESVREELVIKLREK 326
KQ+L +N +V E+ K+R K
Sbjct: 330 KQYLSDNPAVCAEVEAKVRAK 350
>gi|383389189|gb|AFH09572.1| recombinase A [Aeromonas popoffii]
gi|383389193|gb|AFH09574.1| recombinase A [Aeromonas popoffii]
Length = 352
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 188/343 (54%), Positives = 248/343 (72%), Gaps = 4/343 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGSIM LG S T + +STGS +LD+ALG GGLP GR+VEI
Sbjct: 5 KQKALAAALGQIEKQFGKGSIMRLGDSKT-MDIEAISTGSLSLDVALGIGGLPCGRIVEI 63
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIAEAQ++G C FIDAEHALDP A +GV ++LL++QPD GEQ
Sbjct: 64 YGPESSGKTTLTLQVIAEAQKKGKVCAFIDAEHALDPIYAAKLGVNVDDLLISQPDTGEQ 123
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RS +VDV++VDSVAAL PK E++GEMGD+H+ +QARLMSQALRKL+ ++
Sbjct: 124 ALEICDMLVRSNAVDVIIVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKN 183
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
+ + IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+G+E +G++
Sbjct: 184 ANCLCIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAIKEGDEVVGNET 241
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK A+F++ +G GIS+E E++DL +KHK KAGA ++YN +GK
Sbjct: 242 RVKVVKNKVAPPFKQAEFQIFYGVGISKEGELVDLGVKHKLIDKAGAWYSYNGEKIGQGK 301
Query: 303 EAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTE 345
+ EN+++ E+ +LRE L+ + V + D E
Sbjct: 302 ANVMKLFSENKAMAAEVEARLRELLLSGDAPAEKPVAEADELE 344
>gi|51595173|ref|YP_069364.1| recombinase A [Yersinia pseudotuberculosis IP 32953]
gi|153947092|ref|YP_001402197.1| recombinase A [Yersinia pseudotuberculosis IP 31758]
gi|186894188|ref|YP_001871300.1| recombinase A [Yersinia pseudotuberculosis PB1/+]
gi|59798204|sp|Q66E70.1|RECA_YERPS RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|166918717|sp|A7FLR9.1|RECA_YERP3 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|238691404|sp|B2K5X7.1|RECA_YERPB RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|51588455|emb|CAH20063.1| DNA strand exchange and recombination protein with protease and
nuclease activity [Yersinia pseudotuberculosis IP 32953]
gi|152958587|gb|ABS46048.1| protein RecA [Yersinia pseudotuberculosis IP 31758]
gi|186697214|gb|ACC87843.1| recA protein [Yersinia pseudotuberculosis PB1/+]
Length = 356
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/350 (56%), Positives = 251/350 (71%), Gaps = 8/350 (2%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A+ +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV++VDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK G+ +GS+
Sbjct: 185 NANTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKDGDVVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +KHK KAGA ++YN D+ +G
Sbjct: 243 TRVKVVKNKIAAPFKQAEFQILYGEGININGELVDLGVKHKLIEKAGAWYSYNGDKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVV--DHKEPQTAVTDE--DSTEET 347
K +L EN ++ EL KLRE L+ + ++P A T E D +ET
Sbjct: 303 KANASNYLKENPAIAAELDKKLREMLLNGGNGEQPVAAATAEFADGVDET 352
>gi|238758255|ref|ZP_04619434.1| hypothetical protein yaldo0001_26680 [Yersinia aldovae ATCC 35236]
gi|238703585|gb|EEP96123.1| hypothetical protein yaldo0001_26680 [Yersinia aldovae ATCC 35236]
Length = 355
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/349 (56%), Positives = 251/349 (71%), Gaps = 7/349 (2%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A+ +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIASAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV++VDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK G+ +GS+
Sbjct: 185 NANTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKDGDVVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +KHK KAGA ++YN D+ +G
Sbjct: 243 TRVKVVKNKIAAPFKQAEFQILYGEGININGELVDLGVKHKLIEKAGAWYSYNGDKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVV--DHKEPQTAVTD-EDSTEET 347
K +L EN ++ EL KLRE L+ + ++P AV D T+ET
Sbjct: 303 KANASNYLKENPAIAAELDKKLREMLLNGGNGEQPVVAVAALADETDET 351
>gi|227357822|ref|ZP_03842170.1| recombination protein A [Proteus mirabilis ATCC 29906]
gi|227161932|gb|EEI46950.1| recombination protein A [Proteus mirabilis ATCC 29906]
Length = 364
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/339 (56%), Positives = 246/339 (72%), Gaps = 5/339 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + +V +STGS +LD+ALG GGLP+GR+VE
Sbjct: 15 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MNVETISTGSLSLDVALGAGGLPRGRIVE 73
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A+ +GV +NLL +QPD GE
Sbjct: 74 IYGPESSGKTTLTLQVIASAQREGKICAFIDAEHALDPIYAQKLGVDIDNLLCSQPDTGE 133
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV+VVDSVAAL PK E++GE+GD+H+ + AR+MSQA+RKL+ +L
Sbjct: 134 QALEICDALSRSGAVDVIVVDSVAALTPKAEIEGEIGDSHVGLAARMMSQAMRKLAGNLK 193
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK G+E IGS+
Sbjct: 194 NSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGSVKNGDEVIGSE 251
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK+VKNK+A PFK A+F++ +G+GI+ E+IDL +KHK KAGA ++YN +G
Sbjct: 252 TRVKVVKNKVAAPFKQAEFQIMYGEGINTYGELIDLGVKHKLVEKAGAWYSYNGEKIGQG 311
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTD 340
K +L E+ + EL KLRE ++++H T+ D
Sbjct: 312 KANATNYLKEHPEMYNELNTKLRE-MLLNHAGEFTSAAD 349
>gi|317049271|ref|YP_004116919.1| recA protein [Pantoea sp. At-9b]
gi|316950888|gb|ADU70363.1| recA protein [Pantoea sp. At-9b]
Length = 356
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/327 (57%), Positives = 242/327 (74%), Gaps = 4/327 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A+ +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQRKGKTCAFIDAEHALDPVYAKKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV++VDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALARSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+G+E +GS+
Sbjct: 185 QSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAIKEGDEVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +KHK KAGA ++YN D+ +G
Sbjct: 243 TRVKVVKNKVAAPFKQAEFQIMYGEGINTFGELVDLGVKHKLVEKAGAWYSYNGDKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLV 328
K FL EN ++ E+ KLR+ L+
Sbjct: 303 KANATNFLKENPAIANEIDQKLRDMLL 329
>gi|126667872|ref|ZP_01738838.1| recA protein [Marinobacter sp. ELB17]
gi|126627688|gb|EAZ98319.1| recA protein [Marinobacter sp. ELB17]
Length = 371
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/324 (57%), Positives = 242/324 (74%), Gaps = 6/324 (1%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRH-VPVVSTGSFALDIALGTGGLPKGRVVEIYG 65
AL AL QI FGKG+IM +G PR +P VSTGS LD+ALG GGLP GRV EIYG
Sbjct: 8 ALSAALTQIERQFGKGAIMKMGDH--PREAIPSVSTGSLGLDVALGIGGLPYGRVCEIYG 65
Query: 66 PEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQAL 125
PE+SGKTTL L VIAEAQ+QG C F+DAEHALDP AE +GV + LL++QPD GEQAL
Sbjct: 66 PESSGKTTLTLQVIAEAQKQGKTCAFVDAEHALDPQYAEKLGVNVDELLVSQPDTGEQAL 125
Query: 126 SLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQ 185
+ D L+RS +VDV++VDSVAAL PK E++GEMGD+H+ +QARLMSQALRKL+ ++ +
Sbjct: 126 EICDMLVRSNAVDVIIVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLNGNVKNAN 185
Query: 186 TILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAV 245
+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK G+E G++ V
Sbjct: 186 VLLIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAVKDGDEVTGNETRV 243
Query: 246 KIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGKEA 304
K+VKNK+APPF+ A+F++ +GKGI R +E++D+ +K F KAGA + YN D+ +GK
Sbjct: 244 KVVKNKVAPPFRQAEFQILYGKGIYRMAEVVDMGVKEGFVDKAGAWYAYNGDKIGQGKAN 303
Query: 305 FKQFLVENESVREELVIKLREKLV 328
+FL EN + +E+ K+R+KL+
Sbjct: 304 ACKFLEENPEMAKEIEAKVRDKLM 327
>gi|71279561|ref|YP_270789.1| recA protein [Colwellia psychrerythraea 34H]
gi|123760965|sp|Q47WN3.1|RECA_COLP3 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|71145301|gb|AAZ25774.1| recA protein [Colwellia psychrerythraea 34H]
Length = 345
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/323 (58%), Positives = 244/323 (75%), Gaps = 4/323 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K+ AL AL QI FGKGSIM LG + T V +STGS LDIALG GGLP GRVVEI
Sbjct: 5 KEKALSAALAQIERQFGKGSIMKLGDNTT-MDVETISTGSLGLDIALGAGGLPMGRVVEI 63
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIAEAQR G C FIDAEHALDP AE +GV + LL++QPD GEQ
Sbjct: 64 YGPESSGKTTLTLEVIAEAQRNGKVCAFIDAEHALDPVYAEKLGVNIDELLISQPDTGEQ 123
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL +VD L RSG++DV+VVDSVAAL PK E++G+MGD+HM +QAR++SQA+RKL+ +L
Sbjct: 124 ALEIVDMLTRSGAIDVIVVDSVAALTPKAEIEGDMGDSHMGLQARMLSQAMRKLTGNLKK 183
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK G+E +G++
Sbjct: 184 SNTMLIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAVKNGDEIVGNET 241
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGK 302
VK+VKNK+APPFK A+F++ +G+GI+ E+I+L +KH+F KAGA ++ N +R +GK
Sbjct: 242 RVKVVKNKIAPPFKQAEFQILYGEGINNLGELIELGVKHEFVEKAGAWYSCNGERIGQGK 301
Query: 303 EAFKQFLVENESVREELVIKLRE 325
++L E+ + +++ KLR+
Sbjct: 302 ANAAKYLDEHPEMAKDVDTKLRD 324
>gi|400288872|ref|ZP_10790904.1| recombinase A [Psychrobacter sp. PAMC 21119]
Length = 352
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/340 (54%), Positives = 247/340 (72%), Gaps = 3/340 (0%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL+ AL QI FGK +IM LG V VVSTGS LDIALG GGLPKGR+VEIYGP
Sbjct: 8 ALKAALGQIEKQFGKNTIMHLGDDSAIMDVDVVSTGSLGLDIALGIGGLPKGRIVEIYGP 67
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTT+ L IAE Q+QGG C FIDAEHALDP A +GV+T++LLL+QPD GEQAL
Sbjct: 68 ESSGKTTMTLQAIAECQKQGGVCAFIDAEHALDPVYARKLGVRTDDLLLSQPDNGEQALE 127
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ D L+RSG+VD++V+DSVAAL P+ E++GEMGD+HM +QARLMSQALRK++ + S
Sbjct: 128 ITDMLVRSGAVDMIVIDSVAALTPRAEIEGEMGDSHMGLQARLMSQALRKITGNAKRSNC 187
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
+++FINQ+R K+ FG P E T GGNALKFYASVR++I+RIG VK G+E IG+Q VK
Sbjct: 188 MVVFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRMDIRRIGAVKNGDEIIGNQTRVK 245
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGKEAF 305
++KNK+APPF+ A+FE+ +G+G + +E+IDL ++ KAG+ ++Y D +GK
Sbjct: 246 VIKNKMAPPFRQAEFEITYGEGTNHLAEVIDLGVEIGAVGKAGSWYSYGDEKIGQGKANS 305
Query: 306 KQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTE 345
FL EN ++ +E+ K+R++ + KE + T+E E
Sbjct: 306 VLFLKENPAIAKEIEDKIRDEKLGSKKEAKATDTNEADAE 345
>gi|383389289|gb|AFH09622.1| recombinase A [Aeromonas salmonicida]
gi|383389293|gb|AFH09624.1| recombinase A [Aeromonas salmonicida]
gi|383389311|gb|AFH09633.1| recombinase A [Aeromonas salmonicida]
gi|383389351|gb|AFH09653.1| recombinase A [Aeromonas salmonicida]
Length = 353
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 190/344 (55%), Positives = 248/344 (72%), Gaps = 5/344 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGSIM LG S T + +STGS +LD+ALG GGLP GR+VEI
Sbjct: 5 KQKALAAALGQIEKQFGKGSIMRLGDSKT-MDIEAISTGSLSLDVALGIGGLPCGRIVEI 63
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIAEAQ++G C FIDAEHALDP A +GV ++LL++QPD GEQ
Sbjct: 64 YGPESSGKTTLTLQVIAEAQKKGKVCAFIDAEHALDPIYAAKLGVNVDDLLISQPDTGEQ 123
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RS +VDV++VDSVAAL PK E++GEMGD+H+ +QARLMSQALRKL+ ++
Sbjct: 124 ALEICDMLVRSNAVDVIIVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKN 183
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
+ + IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+G+E +G++
Sbjct: 184 ANCLCIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAIKEGDEVVGNET 241
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK A+F++ +G GIS+E E++DL +KHK KAGA ++YN +GK
Sbjct: 242 RVKVVKNKVAPPFKQAEFQIFYGVGISKEGELVDLGVKHKLIDKAGAWYSYNGEKIGQGK 301
Query: 303 EAFKQFLVENESVREELVIKLREKLVV-DHKEPQTAVTDEDSTE 345
+ EN+ + E+ +LRE L+ D + V D D E
Sbjct: 302 ANVMKLFTENKVMAAEVEARLRELLLSGDAPAEKAVVADADELE 345
>gi|421733394|ref|ZP_16172500.1| recombinase A [Bifidobacterium bifidum LMG 13195]
gi|407078636|gb|EKE51436.1| recombinase A [Bifidobacterium bifidum LMG 13195]
Length = 396
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 188/348 (54%), Positives = 259/348 (74%), Gaps = 8/348 (2%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
++ AL AL+Q+ SFGKGS M LG ++V V+ TGS ALD+ALG GGLPKGR+VE
Sbjct: 36 RRKAALDSALEQVEKSFGKGSAMRLGDK-PEQNVEVIPTGSLALDLALGIGGLPKGRIVE 94
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTLALHV+A AQ+ GG FIDAEHALDP A +GV T++L+++QPD GE
Sbjct: 95 IYGPESSGKTTLALHVVANAQKNGGVAAFIDAEHALDPVYARHLGVDTDSLIVSQPDNGE 154
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D LIRSG++DV+V+DSVAALVPK E++G+MGD+H+ +QARLMSQALRK++ +L+
Sbjct: 155 QALEIADMLIRSGALDVIVIDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKMTGALA 214
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ T IFINQ+R K+ F FG P E T GG ALKFYASVRL+I+RI +K GEE +G++
Sbjct: 215 QAGTTAIFINQLREKIGVF-FGNP-ETTTGGKALKFYASVRLDIRRIQTIKNGEEAVGNR 272
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+APPFK+A+F++ +G+GIS+E ++D+AL+ K+G+ FTY+ D+ +G
Sbjct: 273 TKVKVVKNKMAPPFKSAEFDVLYGEGISKEGSVLDMALQCNVVKKSGSWFTYDGDQLGQG 332
Query: 302 KEAFKQFLVENESVREELVIKLREKL----VVDHKEPQTAVTDEDSTE 345
+E ++FL +N + EE+ K++ + V D + TD D+ E
Sbjct: 333 RENVRKFLKDNPQITEEIGNKVKAEFGLIEVPDQLADGESATDGDAPE 380
>gi|207366324|emb|CAQ58057.1| recombinase A [Agrobacterium tumefaciens]
gi|207366354|emb|CAQ58072.1| recombinase A [Agrobacterium tumefaciens]
gi|207366360|emb|CAQ58075.1| recombinase A [Agrobacterium tumefaciens]
Length = 323
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/321 (58%), Positives = 241/321 (75%), Gaps = 3/321 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI SFGKGSIM LG + V VSTGS +LDIALG GGLPKGR++EI
Sbjct: 5 KSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGRIIEI 64
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL IAEAQ++GG C F+DAEHALDP A +GV + LL++QPD GEQ
Sbjct: 65 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQGLLISQPDTGEQ 124
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 125 ALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 184
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+ ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+ EE +G+Q
Sbjct: 185 SKCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAVKEREEVVGNQT 242
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 243 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQGR 302
Query: 303 EAFKQFLVENESVREELVIKL 323
E K FL +N E+ + L
Sbjct: 303 ENAKIFLRDNPETANEIELAL 323
>gi|225388512|ref|ZP_03758236.1| hypothetical protein CLOSTASPAR_02248 [Clostridium asparagiforme
DSM 15981]
gi|225045443|gb|EEG55689.1| hypothetical protein CLOSTASPAR_02248 [Clostridium asparagiforme
DSM 15981]
Length = 375
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/329 (56%), Positives = 249/329 (75%), Gaps = 5/329 (1%)
Query: 1 MSKKDL--ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKG 58
M+++D AL AL QI ++GKGS+M LG S ++ V TGS +LDIALG GG+PKG
Sbjct: 21 MNREDKLKALDAALTQIEKAYGKGSVMKLGDSGANMNIETVPTGSISLDIALGLGGVPKG 80
Query: 59 RVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQP 118
R++E+YGPE+SGKTT+ALH++AE Q++GG FIDAEHALDP A+ IGV +NL ++QP
Sbjct: 81 RIIEVYGPESSGKTTVALHMVAEVQKRGGIAGFIDAEHALDPVYAKNIGVDIDNLYISQP 140
Query: 119 DCGEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLS 178
D GEQAL + +T++RSG+VD+V+VDSVAALVPK E+DGEMGD+H+ +QARLMSQALRKL+
Sbjct: 141 DNGEQALEITETMVRSGAVDIVIVDSVAALVPKAEIDGEMGDSHVGLQARLMSQALRKLT 200
Query: 179 HSLSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEET 238
+S S ++IFINQ+R K+ FG P E T GG ALKFY+SVRL+++RI +K+G E
Sbjct: 201 AVISKSNCVVIFINQLREKVGVM-FGNP-ETTTGGRALKFYSSVRLDVRRIETLKQGGEV 258
Query: 239 IGSQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRN 298
IG+++ VK+VKNK+APPFK A+F++ FGKGISRE +I+DLA K K+GA F YN
Sbjct: 259 IGNRVRVKVVKNKIAPPFKEAEFDIMFGKGISREGDILDLAAKDNIIEKSGAWFAYNGSK 318
Query: 299 F-RGKEAFKQFLVENESVREELVIKLREK 326
+G+E KQ+L +N + E+ K+R K
Sbjct: 319 IGQGRENAKQYLADNPDILAEVEEKVRTK 347
>gi|27380866|ref|NP_772395.1| recombinase A [Bradyrhizobium japonicum USDA 110]
gi|37537946|sp|Q89I84.1|RECA_BRAJA RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|27354032|dbj|BAC51020.1| RecA protein [Bradyrhizobium japonicum USDA 110]
Length = 362
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/345 (55%), Positives = 248/345 (71%), Gaps = 5/345 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGS+M LG++ V VS+GS LDIALG GGLPKGRVVEI
Sbjct: 16 KSKALAAALSQIERQFGKGSVMKLGKNDRSMDVEAVSSGSLGLDIALGIGGLPKGRVVEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH +AEAQ++GG C FIDAEHALDP A +GV + LL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+VVDSVAALVPK EL+GEMGDA +QARLMSQALRKL+ S++
Sbjct: 136 ALEICDTLVRSGAVDVLVVDSVAALVPKAELEGEMGDALPGLQARLMSQALRKLTASINK 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ +G P E T GGNALKFYASVRL+I+RIG +K+ +E +G+
Sbjct: 196 SHTMVIFINQIRMKIGVM-YGSP-ETTTGGNALKFYASVRLDIRRIGAIKERDEVVGNTT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G+G+S+ EI+DL +K K+GA F+Y+ + +G+
Sbjct: 254 RVKVVKNKLAPPFKQVEFDIMYGEGVSKMGEILDLGVKAGIVEKSGAWFSYDSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK--LVVDHKEPQTAVTDEDSTE 345
E K FL N + ++ +R+ L+ + T D D E
Sbjct: 314 ENSKAFLKANPDITAKIETAIRQNSGLIAEQILAGTPERDADGEE 358
>gi|229490860|ref|ZP_04384695.1| protein RecA [Rhodococcus erythropolis SK121]
gi|229322250|gb|EEN88036.1| protein RecA [Rhodococcus erythropolis SK121]
Length = 349
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 183/325 (56%), Positives = 250/325 (76%), Gaps = 4/325 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
+D AL AL QI +FGKGS+M LG V + + V+ TGS ALD+ALG GGLP+GRV+EI
Sbjct: 12 RDKALDLALAQIDKNFGKGSVMRLGEGVR-QPIAVIPTGSIALDVALGIGGLPRGRVIEI 70
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ALH +A AQ GG FIDAEHALDP A +GV T+ LL++QPD GEQ
Sbjct: 71 YGPESSGKTTVALHAVANAQANGGIAAFIDAEHALDPDYAAKLGVDTDALLVSQPDTGEQ 130
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D LIRSG++D+VV+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ +++
Sbjct: 131 ALEITDMLIRSGALDIVVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITGAMNN 190
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T +IFINQ+R K+ FG P E T GG ALKFYASVRL+I+RI +K G + +G++
Sbjct: 191 SGTTVIFINQLREKIGVM-FGSP-ETTTGGKALKFYASVRLDIRRIETLKDGTDAVGNRT 248
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRGK 302
VK+VKNK+APPFK A+F++ +G+GIS+E +ID+ ++H F K+G+ +TY D+ +GK
Sbjct: 249 RVKVVKNKVAPPFKQAEFDILYGQGISKEGSLIDMGVEHGFIRKSGSWYTYEGDQLGQGK 308
Query: 303 EAFKQFLVENESVREELVIKLREKL 327
E ++FL+EN +R+E+ K++EKL
Sbjct: 309 ENARKFLLENTDIRDEIEKKIKEKL 333
>gi|398792411|ref|ZP_10553042.1| protein RecA [Pantoea sp. YR343]
gi|398213140|gb|EJM99735.1| protein RecA [Pantoea sp. YR343]
Length = 356
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 194/349 (55%), Positives = 246/349 (70%), Gaps = 5/349 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VEI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVEI 65
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A+ +GV +NLL +QPD GEQ
Sbjct: 66 YGPESSGKTTLTLQVIASAQRKGKTCAFIDAEHALDPVYAKKLGVDIDNLLCSQPDTGEQ 125
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L RSG+VDV++VDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 126 ALEICDALARSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLKQ 185
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+G+E +GS+
Sbjct: 186 SNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAIKEGDEVVGSET 243
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +KHK KAGA ++YN +GK
Sbjct: 244 RVKVVKNKIAAPFKQAEFQIMYGEGINTFGELVDLGVKHKLVEKAGAWYSYNGEKIGQGK 303
Query: 303 EAFKQFLVENESVREELVIKLREKLVVDH-KEPQTAVTDEDSTEETVST 350
FL EN ++ E+ KLR+ L+ TA D EE T
Sbjct: 304 ANSTNFLKENPAIANEIDKKLRDLLLSGEVAAADTAKISADDREEASET 352
>gi|453072462|ref|ZP_21975588.1| recombinase A [Rhodococcus qingshengii BKS 20-40]
gi|259563342|sp|C0ZYM6.1|RECA_RHOE4 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|226185357|dbj|BAH33461.1| RecA protein [Rhodococcus erythropolis PR4]
gi|452757925|gb|EME16326.1| recombinase A [Rhodococcus qingshengii BKS 20-40]
Length = 345
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 183/325 (56%), Positives = 250/325 (76%), Gaps = 4/325 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
+D AL AL QI +FGKGS+M LG V + + V+ TGS ALD+ALG GGLP+GRV+EI
Sbjct: 8 RDKALDLALAQIDKNFGKGSVMRLGEGVR-QPIAVIPTGSIALDVALGIGGLPRGRVIEI 66
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ALH +A AQ GG FIDAEHALDP A +GV T+ LL++QPD GEQ
Sbjct: 67 YGPESSGKTTVALHAVANAQANGGIAAFIDAEHALDPDYAAKLGVDTDALLVSQPDTGEQ 126
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D LIRSG++D+VV+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ +++
Sbjct: 127 ALEITDMLIRSGALDIVVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITGAMNN 186
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T +IFINQ+R K+ FG P E T GG ALKFYASVRL+I+RI +K G + +G++
Sbjct: 187 SGTTVIFINQLREKIGVM-FGSP-ETTTGGKALKFYASVRLDIRRIETLKDGTDAVGNRT 244
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRGK 302
VK+VKNK+APPFK A+F++ +G+GIS+E +ID+ ++H F K+G+ +TY D+ +GK
Sbjct: 245 RVKVVKNKVAPPFKQAEFDILYGQGISKEGSLIDMGVEHGFIRKSGSWYTYEGDQLGQGK 304
Query: 303 EAFKQFLVENESVREELVIKLREKL 327
E ++FL+EN +R+E+ K++EKL
Sbjct: 305 ENARKFLLENTDIRDEIEKKIKEKL 329
>gi|119468993|ref|ZP_01612018.1| RecA protein (Recombinase A) [Alteromonadales bacterium TW-7]
gi|359449000|ref|ZP_09238505.1| recombination protein RecA [Pseudoalteromonas sp. BSi20480]
gi|392536871|ref|ZP_10284008.1| recombinase A [Pseudoalteromonas marina mano4]
gi|119447645|gb|EAW28912.1| RecA protein (Recombinase A) [Alteromonadales bacterium TW-7]
gi|358045187|dbj|GAA74754.1| recombination protein RecA [Pseudoalteromonas sp. BSi20480]
Length = 347
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/327 (57%), Positives = 246/327 (75%), Gaps = 4/327 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGSIM LG + ++ VSTGS +DIALG GGLP GR+VE+
Sbjct: 5 KQKALDAALSQIERQFGKGSIMKLGDN-KALNIDAVSTGSLGIDIALGIGGLPMGRIVEV 63
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIA+AQ++G C F+DAEHALDP A+ +GV + LL++QPD GEQ
Sbjct: 64 YGPESSGKTTLTLQVIAQAQKEGKTCAFVDAEHALDPVYAQKLGVNIDELLVSQPDTGEQ 123
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RS +VDVV+VDSVAAL PK E++G+MGD+HM +QARLMSQALRKL+ ++
Sbjct: 124 ALEICDMLVRSSAVDVVIVDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTGNIKR 183
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T+ IFINQ+R K+ FG P E T GGNALKFYASVR++I+RIG VK+G+E +G++
Sbjct: 184 SNTLCIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRIDIRRIGSVKEGDEVVGNET 241
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGK 302
VKIVKNK+APPFK A+F + +G+GIS++ E+IDL +KHK KAGA ++YN ++ +GK
Sbjct: 242 RVKIVKNKVAPPFKQAEFIIMYGEGISKQGELIDLGVKHKIVEKAGAWYSYNGNKVGQGK 301
Query: 303 EAFKQFLVENESVREELVIKLREKLVV 329
+FL EN + E+ KLR+ L++
Sbjct: 302 NNSIKFLKENVEIANEIEGKLRDMLLL 328
>gi|392542198|ref|ZP_10289335.1| recombinase A [Pseudoalteromonas piscicida JCM 20779]
Length = 351
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 191/352 (54%), Positives = 250/352 (71%), Gaps = 9/352 (2%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGSIM LG + + +STGS LDIALG GGLP GR+VEI
Sbjct: 5 KQKALDAALSQIERQFGKGSIMKLGEN-KALDIEAISTGSLGLDIALGIGGLPTGRIVEI 63
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L IAEAQ+ G C F+DAEHALDP AE +GV + LL++QPD GEQ
Sbjct: 64 YGPESSGKTTLTLQAIAEAQKLGKTCAFVDAEHALDPIYAEKLGVNVDELLVSQPDTGEQ 123
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RSG+VD++V+DSVAAL PK E++G+MGD+H+ +QARLMSQALRKL+ ++
Sbjct: 124 ALEICDMLVRSGAVDLIVIDSVAALTPKAEIEGDMGDSHVGLQARLMSQALRKLTANIKR 183
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T+ IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+G+E +G++
Sbjct: 184 SNTLCIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGSVKEGDEVVGNET 241
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK A+F + +G+G S++ E+IDL +KHK KAGA F+YN +GK
Sbjct: 242 RVKVVKNKVAPPFKQAEFIIMYGEGTSKQGELIDLGVKHKLVDKAGAWFSYNGNKIGQGK 301
Query: 303 EAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETVSTISPD 354
+FL EN + E+ KLRE L+ Q + E+ ++ ++ + D
Sbjct: 302 ANSIKFLKENVEIANEIEGKLREMLLA-----QAVIMPEEGEDKGLAEVEDD 348
>gi|347753713|ref|YP_004861278.1| recombination protein RecA [Bacillus coagulans 36D1]
gi|347586231|gb|AEP02498.1| Protein recA [Bacillus coagulans 36D1]
Length = 355
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/326 (57%), Positives = 243/326 (74%), Gaps = 4/326 (1%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
M+ + AL +AL QI FGKGSIM LG T R V + TGS ALDIALG GG P+GRV
Sbjct: 1 MNDRQEALDKALKQIEKQFGKGSIMRLGEQ-TDRVVSTIPTGSLALDIALGVGGYPRGRV 59
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+EIYGPE+SGKTT+ALH IAE Q QGG FIDAEHALDP A+ +GV + LLL+QPD
Sbjct: 60 IEIYGPESSGKTTVALHAIAEVQAQGGQAAFIDAEHALDPVYAQKLGVNIDELLLSQPDT 119
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + + L+RSG+VD+VVVDSVAALVP+ E++GEMGD+H+ +QARLMSQALRKLS +
Sbjct: 120 GEQALEIAEALVRSGAVDIVVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLSGA 179
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
++ S TI IFINQ+R K+ FG P EVT GG ALKFY+SVRL ++R +K+G + +G
Sbjct: 180 INKSNTIAIFINQIREKVGVM-FGNP-EVTPGGRALKFYSSVRLEVRRAEQIKQGSDIVG 237
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNF 299
++ +K+VKNK+APPFKTA+ ++ +G+GIS+E EI+D+ K+GA + YN +R
Sbjct: 238 NKTKIKVVKNKVAPPFKTAEVDIMYGEGISKEGEIVDMGSDLDIIQKSGAWYAYNGERLG 297
Query: 300 RGKEAFKQFLVENESVREELVIKLRE 325
+G+E KQFL EN ++ E+ K+RE
Sbjct: 298 QGRENAKQFLKENADLKNEIAAKIRE 323
>gi|207366322|emb|CAQ58056.1| recombinase A [Agrobacterium tumefaciens]
gi|207366326|emb|CAQ58058.1| recombinase A [Agrobacterium tumefaciens]
gi|207366356|emb|CAQ58073.1| recombinase A [Agrobacterium tumefaciens]
gi|207366358|emb|CAQ58074.1| recombinase A [Agrobacterium tumefaciens]
Length = 323
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/321 (58%), Positives = 241/321 (75%), Gaps = 3/321 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI SFGKGSIM LG + V VSTGS +LDIALG GGLPKGR++EI
Sbjct: 5 KSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGRIIEI 64
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL IAEAQ++GG C F+DAEHALDP A +GV + LL++QPD GEQ
Sbjct: 65 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQGLLISQPDTGEQ 124
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 125 ALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 184
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+ ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+ EE +G+Q
Sbjct: 185 SKCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSVKEREEVVGNQT 242
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 243 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQGR 302
Query: 303 EAFKQFLVENESVREELVIKL 323
E K FL +N E+ + L
Sbjct: 303 ENAKIFLRDNPETANEIELAL 323
>gi|154248001|ref|YP_001418959.1| recombinase A [Xanthobacter autotrophicus Py2]
gi|154162086|gb|ABS69302.1| recA protein [Xanthobacter autotrophicus Py2]
Length = 361
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/330 (56%), Positives = 245/330 (74%), Gaps = 5/330 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGSIM LG+ + V TGS LDIA+G GGLPKGRVVEI
Sbjct: 16 KTKALDAALSQIERHFGKGSIMRLGKGGKALEIESVPTGSLGLDIAIGIGGLPKGRVVEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
+GPE+SGKTTLALH +AEAQ++GG C FIDAEHALDP A +GV ++LL++QPD GEQ
Sbjct: 76 FGPESSGKTTLALHTVAEAQKRGGTCAFIDAEHALDPIYARKLGVNLDDLLISQPDAGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+VVDSVAAL P+ ELDGEMGD+ MQARLMSQALRKL+ S+S
Sbjct: 136 ALEIADTLVRSGAIDVLVVDSVAALTPRAELDGEMGDSQPGMQARLMSQALRKLTASISK 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ +G P E T GGNALKFYASVRL+I+RIG++K+ +E +G+Q
Sbjct: 196 SNTMVIFINQIRMKIGVM-YGSP-ETTTGGNALKFYASVRLDIRRIGMIKERDEVVGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G+GIS+ E++DL +K K+GA F+++ + +G+
Sbjct: 254 RVKVVKNKLAPPFKQVEFDIMYGEGISKTGELLDLGVKAGVVEKSGAWFSHDSQRLGQGR 313
Query: 303 EAFKQFLVENESV--REELVIKLREKLVVD 330
E K FL +N+ + R E I+ L+ +
Sbjct: 314 ENAKTFLKQNQEIAGRIEAAIRQNAGLIAE 343
>gi|398826393|ref|ZP_10584638.1| protein RecA [Bradyrhizobium sp. YR681]
gi|398221156|gb|EJN07582.1| protein RecA [Bradyrhizobium sp. YR681]
Length = 362
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/345 (55%), Positives = 248/345 (71%), Gaps = 5/345 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGS+M LG++ V VS+GS LDIALG GGLPKGRVVEI
Sbjct: 16 KTKALAAALSQIERQFGKGSVMKLGKNDRSMDVEAVSSGSLGLDIALGIGGLPKGRVVEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH +AEAQ++GG C FIDAEHALDP A +GV + LL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+VVDSVAALVPK EL+GEMGDA +QARLMSQALRKL+ S++
Sbjct: 136 ALEICDTLVRSGAVDVLVVDSVAALVPKAELEGEMGDALPGLQARLMSQALRKLTASINK 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ +G P E T GGNALKFYASVRL+I+RIG +K+ +E +G+
Sbjct: 196 SNTMVIFINQIRMKIGVM-YGSP-ETTTGGNALKFYASVRLDIRRIGAIKERDEVVGNTT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G+G+S+ EI+DL +K K+GA F+Y+ + +G+
Sbjct: 254 RVKVVKNKLAPPFKQVEFDIMYGEGVSKMGEILDLGVKAGIVEKSGAWFSYDSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK--LVVDHKEPQTAVTDEDSTE 345
E K FL N + ++ +R+ L+ + T D D E
Sbjct: 314 ENSKAFLKANPDITAKIETAIRQNSGLIAEQILAGTPERDADGEE 358
>gi|357053792|ref|ZP_09114884.1| RecA protein [Clostridium clostridioforme 2_1_49FAA]
gi|355385418|gb|EHG32470.1| RecA protein [Clostridium clostridioforme 2_1_49FAA]
Length = 378
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 183/321 (57%), Positives = 244/321 (76%), Gaps = 3/321 (0%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL AL QI ++GKGS+M LG S ++ V TGS +LDIALG GG+PKGR+VE+YGP
Sbjct: 22 ALDAALTQIEKAYGKGSVMKLGDSRANMNIETVPTGSISLDIALGLGGVPKGRIVEVYGP 81
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTT+ALH++AE Q++GG FIDAEHALDP A IGV +NL ++QPD GEQAL
Sbjct: 82 ESSGKTTVALHMVAEVQKRGGIAGFIDAEHALDPVYARNIGVDIDNLYISQPDNGEQALE 141
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ +T++RSG+VD+V+VDSVAALVPK E+DGEMGD+H+ +QARLMSQALRKL+ +S S
Sbjct: 142 ITETMVRSGAVDIVIVDSVAALVPKAEIDGEMGDSHVGLQARLMSQALRKLTAVISKSNC 201
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
I+IFINQ+R K+ FG P E T GG ALKFYASVRL+++RI +K+G E G+++ +K
Sbjct: 202 IVIFINQLREKVGVM-FGNP-ETTTGGRALKFYASVRLDVRRIETLKQGGEVTGNRVRIK 259
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGKEAF 305
+VKNK+APPFK A+F++ FGKGIS+E +I+DLA+K K+GA F YN +G+E
Sbjct: 260 VVKNKIAPPFKEAEFDIMFGKGISKEGDILDLAVKENIIEKSGAWFAYNGAKIGQGRENS 319
Query: 306 KQFLVENESVREELVIKLREK 326
KQ+L +N ++ E+ K+R K
Sbjct: 320 KQYLSDNPAICAEVEAKVRAK 340
>gi|5103048|dbj|BAA78779.1| RecA protein [Rhodopseudomonas palustris]
Length = 363
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 183/324 (56%), Positives = 243/324 (75%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGS+M LG++ + +S+GS LDIALG GGLPKGR+VEI
Sbjct: 17 KSKALSAALSQIERQFGKGSVMKLGKNDRAMEIETISSGSLGLDIALGVGGLPKGRIVEI 76
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH +AEAQ++GG C FIDAEHALDP A +GV ++LL++QPD GEQ
Sbjct: 77 YGPESSGKTTLALHCVAEAQKKGGICAFIDAEHALDPVYARKLGVNVDDLLISQPDHGEQ 136
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV++VDSVAALVP+ EL+GEMGDA +QARLMSQALRKL+ S++
Sbjct: 137 ALEIADTLVRSGAIDVLIVDSVAALVPRAELEGEMGDALPGLQARLMSQALRKLTASINK 196
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ +G P E T GGNALKFYASVRL+I+RIG +K+ +E IG+Q
Sbjct: 197 SNTMVIFINQIRMKIGVM-YGSP-ETTTGGNALKFYASVRLDIRRIGAIKERDEVIGNQT 254
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G+G+S+ EI+DL +K K+GA F+Y+ + +G+
Sbjct: 255 RVKVVKNKLAPPFKQVEFDIMYGEGVSKMGEILDLGVKAGIVEKSGAWFSYDSQRLGQGR 314
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E K FL N + ++ +R+
Sbjct: 315 ENAKSFLRSNPDMTAKIEAAIRQN 338
>gi|322831419|ref|YP_004211446.1| recA protein [Rahnella sp. Y9602]
gi|384256533|ref|YP_005400467.1| recombinase A [Rahnella aquatilis HX2]
gi|417635|sp|P33037.3|RECA_ENTAG RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|1209308|gb|AAA91766.1| recA [Pantoea agglomerans]
gi|321166620|gb|ADW72319.1| recA protein [Rahnella sp. Y9602]
gi|380752509|gb|AFE56900.1| recombinase A [Rahnella aquatilis HX2]
Length = 354
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 193/344 (56%), Positives = 245/344 (71%), Gaps = 4/344 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A+ +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV++VDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+G+ +GS+
Sbjct: 185 NANTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAIKEGDVVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK+VKNK+A PFK A+F++ +G+GI+ E+IDL +KHK KAGA ++YN +G
Sbjct: 243 TRVKVVKNKIAAPFKQAEFQILYGEGININGELIDLGVKHKLIEKAGAWYSYNGEKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTE 345
K +L EN V EL KLR+ L+ E A T ED+ +
Sbjct: 303 KANSCNYLKENPKVAAELDKKLRDMLLSGTGELSVATTAEDADD 346
>gi|163794127|ref|ZP_02188100.1| RecA protein [alpha proteobacterium BAL199]
gi|159180741|gb|EDP65260.1| RecA protein [alpha proteobacterium BAL199]
Length = 360
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 188/330 (56%), Positives = 247/330 (74%), Gaps = 5/330 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI +FGKGS+M LG+ + VSTGS LDIALG GGLP+GRVVEI
Sbjct: 15 KSKALEAALSQIERAFGKGSVMKLGQREGAVEIDTVSTGSIGLDIALGIGGLPRGRVVEI 74
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL+LHV+AEAQ+ GG C F+DAEHALDP A +GV + LL++QPD GEQ
Sbjct: 75 YGPESSGKTTLSLHVVAEAQKAGGTCAFVDAEHALDPIYARKLGVDVDELLISQPDTGEQ 134
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+VVDSVAALVP+ EL+GEMGD H+ +QARLMSQALRKL+ S+S
Sbjct: 135 ALEIADTLVRSGAIDVLVVDSVAALVPRAELEGEMGDTHVGLQARLMSQALRKLTGSISK 194
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+ ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K +E +G+Q
Sbjct: 195 SRCMVIFINQIRQKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAIKDRDEVVGNQT 252
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRGK 302
VK+VKNKLAPPF+ +F++ +G+G+S+ E++DL + K+GA F++ +R +G+
Sbjct: 253 RVKVVKNKLAPPFRVVEFDIMYGEGVSKMGELLDLGVNAGIVEKSGAWFSHGGNRIGQGR 312
Query: 303 EAFKQFLVENESVREELVIKLREK--LVVD 330
E K FL +N V + + K+RE LV D
Sbjct: 313 ENAKTFLRQNPDVAQIIERKIRENAGLVAD 342
>gi|152997733|ref|YP_001342568.1| recA protein [Marinomonas sp. MWYL1]
gi|150838657|gb|ABR72633.1| recA protein [Marinomonas sp. MWYL1]
Length = 358
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 195/358 (54%), Positives = 249/358 (69%), Gaps = 13/358 (3%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKG+IM +G + VSTGS LDIALG GGLP GR+ EI
Sbjct: 8 KKKALDAALSQIERQFGKGAIMKMGEGAK-LDIDTVSTGSLGLDIALGAGGLPYGRICEI 66
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIAEAQ+QG C FIDAEHALDPS AE +GV +LL++QPD GEQ
Sbjct: 67 YGPESSGKTTLTLSVIAEAQKQGKTCAFIDAEHALDPSYAEKLGVNIADLLISQPDTGEQ 126
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL +VD L+RS SVDV++VDSVAALVPK E++GEMG + + +QARL+SQA+RKL+ S+
Sbjct: 127 ALEIVDMLVRSNSVDVIIVDSVAALVPKSEIEGEMGSSSVGVQARLLSQAMRKLTGSIKN 186
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
+ ++IFINQ+R K+ FG P E T GGNALKFY+SVRL+I+RIG VK+G+E IG++
Sbjct: 187 ANCLVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYSSVRLDIRRIGSVKQGDEVIGNET 244
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK A+F++ +G GI R E+IDL +K F KAGA + YN +GK
Sbjct: 245 RVKVVKNKIAPPFKQAEFQIMYGAGIYRMGEVIDLGVKQGFVDKAGAWYAYNGNKIGQGK 304
Query: 303 EAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETVSTISPDSTDEEA 360
QFL +N + +E+ K+RE L+ P+ TDE + + DEEA
Sbjct: 305 ANAAQFLADNPEMAKEIEAKIREDLL-----PKKGQTDEKTNAKETDV----EADEEA 353
>gi|398801684|ref|ZP_10560922.1| protein RecA [Pantoea sp. GM01]
gi|398091368|gb|EJL81813.1| protein RecA [Pantoea sp. GM01]
Length = 356
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 194/349 (55%), Positives = 247/349 (70%), Gaps = 5/349 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VEI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVEI 65
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A+ +GV +NLL +QPD GEQ
Sbjct: 66 YGPESSGKTTLTLQVIASAQRKGKTCAFIDAEHALDPVYAKKLGVDIDNLLCSQPDTGEQ 125
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L RSG+VDV++VDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 126 ALEICDALARSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLKQ 185
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+G+E +GS+
Sbjct: 186 SNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAIKEGDEVVGSET 243
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +KHK KAGA ++YN +GK
Sbjct: 244 RVKVVKNKIAAPFKQAEFQIMYGEGINTFGELVDLGVKHKLVEKAGAWYSYNGEKIGQGK 303
Query: 303 EAFKQFLVENESVREELVIKLREKLVV-DHKEPQTAVTDEDSTEETVST 350
FL EN ++ E+ KLR+ L+ D TA + EE T
Sbjct: 304 ANSTNFLKENPAIANEIDKKLRDLLLSGDAVAADTAKISAEDREEASET 352
>gi|310287748|ref|YP_003939006.1| recombinase A [Bifidobacterium bifidum S17]
gi|311064634|ref|YP_003971359.1| recombinase A [Bifidobacterium bifidum PRL2010]
gi|390937162|ref|YP_006394721.1| recombinase A [Bifidobacterium bifidum BGN4]
gi|421736407|ref|ZP_16175219.1| recombinase A [Bifidobacterium bifidum IPLA 20015]
gi|309251684|gb|ADO53432.1| RecA protein [Bifidobacterium bifidum S17]
gi|310866953|gb|ADP36322.1| RecA protein [Bifidobacterium bifidum PRL2010]
gi|389890775|gb|AFL04842.1| recombinase A [Bifidobacterium bifidum BGN4]
gi|407296301|gb|EKF15871.1| recombinase A [Bifidobacterium bifidum IPLA 20015]
Length = 396
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 188/348 (54%), Positives = 259/348 (74%), Gaps = 8/348 (2%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
++ AL AL+Q+ SFGKGS M LG ++V V+ TGS ALD+ALG GGLPKGR+VE
Sbjct: 36 RRKAALDSALEQVEKSFGKGSAMRLGDK-PEQNVEVIPTGSLALDLALGIGGLPKGRIVE 94
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTLALHV+A AQ+ GG FIDAEHALDP A +GV T++L+++QPD GE
Sbjct: 95 IYGPESSGKTTLALHVVANAQKNGGVAAFIDAEHALDPVYARHLGVDTDSLIVSQPDNGE 154
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D LIRSG++DV+V+DSVAALVPK E++G+MGD+H+ +QARLMSQALRK++ +L+
Sbjct: 155 QALEIADMLIRSGALDVIVIDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKMTGALA 214
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ T IFINQ+R K+ F FG P E T GG ALKFYASVRL+I+RI +K GEE +G++
Sbjct: 215 QAGTTAIFINQLREKIGVF-FGNP-ETTTGGKALKFYASVRLDIRRIQTIKNGEEAVGNR 272
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+APPFK+A+F++ +G+GIS+E ++D+AL+ K+G+ FTY+ D+ +G
Sbjct: 273 TKVKVVKNKMAPPFKSAEFDVLYGEGISKEGSVLDMALQCNVVKKSGSWFTYDGDQLGQG 332
Query: 302 KEAFKQFLVENESVREELVIKLREKL----VVDHKEPQTAVTDEDSTE 345
+E ++FL +N + EE+ K++ + V D + TD D+ E
Sbjct: 333 RENVRKFLKDNPQITEEIGNKVKAEFGLIEVPDQLADGESATDGDAPE 380
>gi|283456289|ref|YP_003360853.1| RecA protein [Bifidobacterium dentium Bd1]
gi|306822508|ref|ZP_07455886.1| recombination protein A [Bifidobacterium dentium ATCC 27679]
gi|309801448|ref|ZP_07695575.1| RecA protein [Bifidobacterium dentium JCVIHMP022]
gi|283102923|gb|ADB10029.1| RecA protein [Bifidobacterium dentium Bd1]
gi|304554053|gb|EFM41962.1| recombination protein A [Bifidobacterium dentium ATCC 27679]
gi|308221963|gb|EFO78248.1| RecA protein [Bifidobacterium dentium JCVIHMP022]
Length = 386
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/351 (53%), Positives = 259/351 (73%), Gaps = 6/351 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
++ AL+ AL Q+ +FGKGS M LG + V V+ TGS ALD+ALG GGLPKGR+VE
Sbjct: 23 RRQAALETALAQVEKNFGKGSAMRLGDR-PEQDVEVIPTGSLALDMALGIGGLPKGRIVE 81
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTLALHV+A AQ++GG FIDAEHALDP A +GV T++L+++QPD GE
Sbjct: 82 IYGPESSGKTTLALHVVANAQKKGGVAAFIDAEHALDPVYARKLGVDTDSLIVSQPDNGE 141
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D LIRSG++DV+V+DSVAALVPK E++GEMGD+H+ +QARLMSQALRK++ +L+
Sbjct: 142 QALEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKMTGALA 201
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ T IFINQ+R K+ F FG P E T GG ALKFYASVR++I+RI +K G+E +G++
Sbjct: 202 QAGTTAIFINQLREKIGVF-FGNP-ETTTGGKALKFYASVRMDIRRIQTIKNGDEAVGNR 259
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+APPFK+A+F++ +G+GIS+E ++D+AL+ K+G+ FTY+ D+ +G
Sbjct: 260 TRVKVVKNKMAPPFKSAEFDVLYGEGISKEGSVLDMALQVNVVKKSGSWFTYDGDQLGQG 319
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETVSTIS 352
+E +QFL +N V EE I+ R K EP ++ ET ++ S
Sbjct: 320 RENVRQFLKDNPGVTEE--IENRVKAAFGLIEPTDQFAEDGDGNETAASES 368
>gi|163814166|ref|ZP_02205558.1| hypothetical protein COPEUT_00320 [Coprococcus eutactus ATCC 27759]
gi|158450615|gb|EDP27610.1| RecA protein [Coprococcus eutactus ATCC 27759]
Length = 354
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/327 (55%), Positives = 248/327 (75%), Gaps = 3/327 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL A+ QI +GKGS+M LG S ++ V+ TGS +LDIALG GG+P+GR++E+
Sbjct: 14 KKKALDAAIAQIEKQYGKGSVMKLGDSNANMNIDVIPTGSLSLDIALGLGGIPRGRIIEV 73
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
+GPE+SGKTT+ALH++AE Q++GG FIDAEHALDP+ A+ IGV +NL ++QPDCGEQ
Sbjct: 74 FGPESSGKTTVALHIVAEIQKRGGIAGFIDAEHALDPTYAKNIGVDIDNLYISQPDCGEQ 133
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + +T++RSG+VDVV+VDSVAALVPK E+DGEMGD+HM + ARLMSQALRKL+ +S
Sbjct: 134 ALEITETMVRSGAVDVVIVDSVAALVPKAEIDGEMGDSHMGLHARLMSQALRKLTAVVSK 193
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
+ ++IFINQ+R K+ FG P EVT GG ALKFYASVRL+++RI +++G E +G++
Sbjct: 194 TNCVVIFINQLREKVGVV-FGNP-EVTTGGRALKFYASVRLDVRRIDTLRQGGEIVGNRT 251
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VKIVKNK+APPFK A+F++ FGKGIS+ +I+DLA+ + K+GA + YN +G+
Sbjct: 252 RVKIVKNKVAPPFKEAEFDIVFGKGISKVGDILDLAVANDIVDKSGAWYAYNGNKIGQGR 311
Query: 303 EAFKQFLVENESVREELVIKLREKLVV 329
E K +L NE++ E+ K+RE L V
Sbjct: 312 ENAKMYLENNETICSEIEQKVREILGV 338
>gi|323489614|ref|ZP_08094841.1| recombinase A [Planococcus donghaensis MPA1U2]
gi|323396745|gb|EGA89564.1| recombinase A [Planococcus donghaensis MPA1U2]
Length = 353
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/326 (56%), Positives = 244/326 (74%), Gaps = 4/326 (1%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
MS + AL AL QI FGKGS+M LG + + R++ VS+GS ALD ALG GG P+GRV
Sbjct: 1 MSDRKAALDMALKQIEKQFGKGSVMKLGEN-SDRNISSVSSGSLALDTALGIGGYPRGRV 59
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+E+YGPE+SGKTT++LH IAE Q GG FIDAEHALDP A+ +GV + LLL+QPD
Sbjct: 60 IEVYGPESSGKTTVSLHAIAEVQATGGTAAFIDAEHALDPVYAKNLGVNIDELLLSQPDT 119
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + + L+RSG+VD+VVVDSVAALVPK E++GEMGD+HM +QARLMSQALRKLS
Sbjct: 120 GEQALEIAEALVRSGAVDIVVVDSVAALVPKAEIEGEMGDSHMGLQARLMSQALRKLSGV 179
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
++ S TI+IFINQ+R K+ FG P E T GG ALKFY+SVRL ++R +K G E IG
Sbjct: 180 INKSNTIVIFINQIREKIGVM-FGNP-ETTPGGRALKFYSSVRLEVRRAEALKSGTEIIG 237
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNF 299
++ +KIVKNK+APPF+TA+ ++ +GKGISRE EI+D+ + K+G+ ++YN +R
Sbjct: 238 NRTKIKIVKNKVAPPFRTAEVDIMYGKGISREGEIVDIGSDLEIIQKSGSWYSYNEERIG 297
Query: 300 RGKEAFKQFLVENESVREELVIKLRE 325
+G+E KQFL++N +R E+ K+RE
Sbjct: 298 QGRENVKQFLLKNPEIRNEISNKIRE 323
>gi|290476265|ref|YP_003469169.1| DNA strand exchange and recombination protein [Xenorhabdus bovienii
SS-2004]
gi|289175602|emb|CBJ82405.1| DNA strand exchange and recombination protein with protease and
nuclease activity [Xenorhabdus bovienii SS-2004]
Length = 358
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 197/350 (56%), Positives = 251/350 (71%), Gaps = 9/350 (2%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + + V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGENRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A+ +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIASAQREGKTCAFIDAEHALDPVYAKKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV+VVDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALSRSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+R G VK G+E +GS+
Sbjct: 185 NSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRTGSVKNGDEVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +KHK KAGA ++YN D+ +G
Sbjct: 243 TRVKVVKNKIAAPFKQAEFQILYGEGINTFGELVDLGVKHKMVEKAGAWYSYNGDKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTD-----EDSTEE 346
K +L E+ + EL KLRE L+ + +AV+D ED+ EE
Sbjct: 303 KANATIYLKEHPEISAELDKKLRELLLNNAGGFNSAVSDYEADYEDNGEE 352
>gi|145300676|ref|YP_001143517.1| recombinase A [Aeromonas salmonicida subsp. salmonicida A449]
gi|418361150|ref|ZP_12961806.1| recombinase A [Aeromonas salmonicida subsp. salmonicida 01-B526]
gi|148887151|sp|P94190.2|RECA_AERS4 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|142853448|gb|ABO91769.1| RecA protein [Aeromonas salmonicida subsp. salmonicida A449]
gi|356687508|gb|EHI52089.1| recombinase A [Aeromonas salmonicida subsp. salmonicida 01-B526]
gi|383389287|gb|AFH09621.1| recombinase A [Aeromonas salmonicida subsp. salmonicida]
gi|383389295|gb|AFH09625.1| recombinase A [Aeromonas salmonicida]
gi|383389303|gb|AFH09629.1| recombinase A [Aeromonas salmonicida]
gi|383389305|gb|AFH09630.1| recombinase A [Aeromonas salmonicida]
gi|383389307|gb|AFH09631.1| recombinase A [Aeromonas salmonicida]
gi|383389313|gb|AFH09634.1| recombinase A [Aeromonas salmonicida]
gi|383389319|gb|AFH09637.1| recombinase A [Aeromonas salmonicida]
gi|383389321|gb|AFH09638.1| recombinase A [Aeromonas salmonicida]
gi|383389329|gb|AFH09642.1| recombinase A [Aeromonas salmonicida]
gi|383389331|gb|AFH09643.1| recombinase A [Aeromonas salmonicida]
gi|383389343|gb|AFH09649.1| recombinase A [Aeromonas salmonicida]
gi|383389345|gb|AFH09650.1| recombinase A [Aeromonas salmonicida]
gi|383389349|gb|AFH09652.1| recombinase A [Aeromonas salmonicida]
gi|383389353|gb|AFH09654.1| recombinase A [Aeromonas salmonicida]
gi|383389359|gb|AFH09657.1| recombinase A [Aeromonas salmonicida subsp. achromogenes]
gi|383389361|gb|AFH09658.1| recombinase A [Aeromonas salmonicida subsp. masoucida]
gi|383389365|gb|AFH09660.1| recombinase A [Aeromonas salmonicida subsp. smithia]
Length = 353
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 191/346 (55%), Positives = 250/346 (72%), Gaps = 7/346 (2%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGSIM LG S T + +STGS +LD+ALG GGLP GR+VEI
Sbjct: 5 KQKALAAALGQIEKQFGKGSIMRLGDSKT-MDIEAISTGSLSLDVALGIGGLPCGRIVEI 63
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIAEAQ++G C FIDAEHALDP A +GV ++LL++QPD GEQ
Sbjct: 64 YGPESSGKTTLTLQVIAEAQKKGKVCAFIDAEHALDPIYAAKLGVNVDDLLISQPDTGEQ 123
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RS +VDV++VDSVAAL PK E++GEMGD+H+ +QARLMSQALRKL+ ++
Sbjct: 124 ALEICDMLVRSNAVDVIIVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKN 183
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
+ + IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+G+E +G++
Sbjct: 184 ANCLCIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAIKEGDEVVGNET 241
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK A+F++ +G GIS+E E++DL +KHK KAGA ++YN +GK
Sbjct: 242 RVKVVKNKVAPPFKQAEFQIFYGVGISKEGELVDLGVKHKLIDKAGAWYSYNGEKIGQGK 301
Query: 303 EAFKQFLVENESVREELVIKLREKLV---VDHKEPQTAVTDEDSTE 345
+ EN+ + E+ +LRE L+ V ++P A DE E
Sbjct: 302 ANVMKLFTENKVMAAEVEARLRELLLSGDVPAEKPVVADADELEAE 347
>gi|238753057|ref|ZP_04614512.1| hypothetical protein yrohd0001_38490 [Yersinia rohdei ATCC 43380]
gi|238708735|gb|EEQ00998.1| hypothetical protein yrohd0001_38490 [Yersinia rohdei ATCC 43380]
Length = 354
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/350 (56%), Positives = 247/350 (70%), Gaps = 9/350 (2%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A+ +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV++VDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK G+ +GS+
Sbjct: 185 NANTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKDGDVVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +KHK KAGA ++YN D+ +G
Sbjct: 243 TRVKVVKNKIAAPFKQAEFQILYGEGININGELVDLGVKHKLIEKAGAWYSYNGDKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVT-----DEDSTEE 346
K +L EN +V EL KLRE L+ Q T +ED T E
Sbjct: 303 KANASNYLKENPAVAAELDKKLREMLLNGGNGEQPVATAVLADEEDETSE 352
>gi|227114948|ref|ZP_03828604.1| recombinase A [Pectobacterium carotovorum subsp. brasiliensis
PBR1692]
gi|227329401|ref|ZP_03833425.1| recombinase A [Pectobacterium carotovorum subsp. carotovorum WPP14]
Length = 357
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 195/346 (56%), Positives = 246/346 (71%), Gaps = 6/346 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A+ +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV++VDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+R G +K+GEE +GS+
Sbjct: 185 QANTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRTGAIKEGEEVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +KHK KAGA ++YN D+ +G
Sbjct: 243 TRVKVVKNKVAAPFKQAEFQILYGEGINIHGELVDLGVKHKLIEKAGAWYSYNGDKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKE--PQTAVTDEDSTE 345
K FL EN ++ EL KLRE L+ E P A D E
Sbjct: 303 KANACNFLKENPAIAAELDKKLREMLLHKGNELTPAAAGNSHDEDE 348
>gi|383389317|gb|AFH09636.1| recombinase A [Aeromonas salmonicida]
Length = 353
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 190/344 (55%), Positives = 248/344 (72%), Gaps = 5/344 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGSIM LG S T + +STGS +LD+ALG GGLP GR+VEI
Sbjct: 5 KQKALAAALGQIEKQFGKGSIMRLGDSKT-MDIEAISTGSLSLDVALGIGGLPCGRIVEI 63
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIAEAQ++G C FIDAEHALDP A +GV ++LL++QPD GEQ
Sbjct: 64 YGPESSGKTTLTLQVIAEAQKKGKVCAFIDAEHALDPIYAAKLGVNVDDLLISQPDTGEQ 123
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RS +VDV++VDSVAAL PK E++GEMGD+H+ +QARLMSQALRKL+ ++
Sbjct: 124 ALEICDMLVRSNAVDVIIVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKN 183
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
+ + IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+G+E +G++
Sbjct: 184 ANCLCIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAIKEGDEVVGNET 241
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK A+F++ +G GIS+E E++DL +KHK KAGA ++YN +GK
Sbjct: 242 RVKVVKNKVAPPFKQAEFQIFYGVGISKEGELVDLGVKHKLIDKAGAWYSYNGEKIGQGK 301
Query: 303 EAFKQFLVENESVREELVIKLREKLVVDHKEPQT-AVTDEDSTE 345
+ EN+ + E+ +LRE L+ +T V D D E
Sbjct: 302 ANVMKLFTENKVMAAEVEARLRELLLSGDAPAETPVVADADELE 345
>gi|383389301|gb|AFH09628.1| recombinase A [Aeromonas salmonicida]
gi|383389315|gb|AFH09635.1| recombinase A [Aeromonas salmonicida]
gi|383389337|gb|AFH09646.1| recombinase A [Aeromonas salmonicida]
gi|383389339|gb|AFH09647.1| recombinase A [Aeromonas salmonicida]
Length = 353
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 190/344 (55%), Positives = 248/344 (72%), Gaps = 5/344 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGSIM LG S T + +STGS +LD+ALG GGLP GR+VEI
Sbjct: 5 KQKALAAALGQIEKQFGKGSIMRLGDSKT-MDIEAISTGSLSLDVALGIGGLPCGRIVEI 63
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIAEAQ++G C FIDAEHALDP A +GV ++LL++QPD GEQ
Sbjct: 64 YGPESSGKTTLTLQVIAEAQKKGKVCAFIDAEHALDPIYAAKLGVNVDDLLISQPDTGEQ 123
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RS +VDV++VDSVAAL PK E++GEMGD+H+ +QARLMSQALRKL+ ++
Sbjct: 124 ALEICDMLVRSNAVDVIIVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKN 183
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
+ + IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+G+E +G++
Sbjct: 184 ANCLCIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAIKEGDEVVGNET 241
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK A+F++ +G GIS+E E++DL +KHK KAGA ++YN +GK
Sbjct: 242 RVKVVKNKVAPPFKQAEFQIFYGVGISKEGELVDLGVKHKLIDKAGAWYSYNGEKIGQGK 301
Query: 303 EAFKQFLVENESVREELVIKLREKLVV-DHKEPQTAVTDEDSTE 345
+ EN+ + E+ +LRE L+ D + V D D E
Sbjct: 302 ANVMKLFTENKVMAAEVEARLRELLLSGDVPAEKAVVADADELE 345
>gi|379011812|ref|YP_005269624.1| recombinase A [Acetobacterium woodii DSM 1030]
gi|375302601|gb|AFA48735.1| recombinase A [Acetobacterium woodii DSM 1030]
Length = 359
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/348 (53%), Positives = 252/348 (72%), Gaps = 8/348 (2%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
S K AL AL I SFGKG++M LG +V V+ST S LD+ALG GG+P+GRV
Sbjct: 11 FSDKQKALDAALKNIERSFGKGAVMRLGDDAAKLNVDVISTSSIGLDMALGVGGVPRGRV 70
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
VEIYGPE+SGKTTLALH+IAEAQR GG F+DAEHALDP+ A+ +GV +NLL+AQPD
Sbjct: 71 VEIYGPESSGKTTLALHIIAEAQRTGGNAAFVDAEHALDPTYAKALGVDIDNLLVAQPDT 130
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQA+ +V+ L+RS ++DVVV+DSVAALVP+ E+DGEMGD+HM +QARLMSQALRKL+
Sbjct: 131 GEQAMEIVEALVRSNAIDVVVIDSVAALVPRAEIDGEMGDSHMGLQARLMSQALRKLTGV 190
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
+ S T IFINQ+R K+ FG P E T GG ALKFYASVR++++RI +KKG E IG
Sbjct: 191 IKKSNTTTIFINQLREKIGVM-FGNP-ETTTGGKALKFYASVRIDVRRIESLKKGTEIIG 248
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF- 299
++ KIVKNK+APPFK A+F++ +GKGISRE +++D+ + K+G+ F+Y ++
Sbjct: 249 NRTRAKIVKNKIAPPFKQAEFDIMYGKGISREGDLLDVGVDFGIVDKSGSWFSYGEQRLG 308
Query: 300 RGKEAFKQFLVENESVREELVIKLRE-----KLVVDHKEPQTAVTDED 342
+G++ K++L+ N V + ++R+ K+V D E + +TD++
Sbjct: 309 QGRDNSKEYLIANPEVANTIEKEIRDKNALNKIVADPDEHEDDLTDDE 356
>gi|357384882|ref|YP_004899606.1| recombinase A [Pelagibacterium halotolerans B2]
gi|351593519|gb|AEQ51856.1| RecA protein [Pelagibacterium halotolerans B2]
Length = 357
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 188/344 (54%), Positives = 257/344 (74%), Gaps = 6/344 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K+ AL+ AL QI +FGKGSIM LG + T +V +STGS LDIALG GGLP+GR++E+
Sbjct: 16 KNKALEAALGQIERNFGKGSIMKLGEN-TQVNVESISTGSLGLDIALGIGGLPRGRIIEV 74
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
+GPE+SGKTTLALHV+AEAQ+ GG C FIDAEHALDP+ A +GV ++LL++QPD GEQ
Sbjct: 75 FGPESSGKTTLALHVLAEAQKSGGICAFIDAEHALDPTYARKLGVNIDDLLISQPDAGEQ 134
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+VVDSVAAL P+ EL+GEMGD+ +QARLMSQA+RKL+ S+S
Sbjct: 135 ALEIADTLVRSGAIDVLVVDSVAALTPRAELEGEMGDSLPGLQARLMSQAMRKLTASISK 194
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+ ++IFINQ+R K+ FG P E T GGNALKFY+SVRL+I+RIG +K EE +G+Q
Sbjct: 195 SKAMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYSSVRLDIRRIGAIKDREEVVGNQT 252
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPF+ +F++ +G+GIS+ E++DL +K K+GA F+Y+ + +G+
Sbjct: 253 RVKVVKNKMAPPFRQVEFDIMYGEGISKTGELLDLGVKAGIVEKSGAWFSYDSQRLGQGR 312
Query: 303 EAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEE 346
E +QFL +N + ++ +RE + E TA EDS E+
Sbjct: 313 ENSRQFLKDNPEIAHQIENGVRESAGLIAAELITA--GEDSAED 354
>gi|431805797|ref|YP_007232698.1| recombinase A [Liberibacter crescens BT-1]
gi|430799772|gb|AGA64443.1| RecA protein [Liberibacter crescens BT-1]
Length = 345
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 190/330 (57%), Positives = 241/330 (73%), Gaps = 5/330 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI SFGKGSIM LG + +STGS LDIALG GGLPKGR+ EI
Sbjct: 3 KGKALEAALSQIERSFGKGSIMRLGSKENVVEIETISTGSLGLDIALGIGGLPKGRITEI 62
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH IA+AQ++ G C F+DAEHA D A+ +GV +NLL++QPD GEQ
Sbjct: 63 YGPESSGKTTLALHTIAQAQKKSGICAFVDAEHAFDSLYAKKLGVDLQNLLVSQPDTGEQ 122
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTLIRSG+VDV+VVDSVAAL P+ E++GEMGD MQARLMSQALRKL+ S+S
Sbjct: 123 ALEITDTLIRSGAVDVLVVDSVAALTPRAEIEGEMGDNLPGMQARLMSQALRKLTASISR 182
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ILIFINQ+R K+ FG P E T GGNALKFY+S+RL+I+RIG VK+ EE IG+Q
Sbjct: 183 SNCILIFINQMRMKIGVM-FGSP-ETTTGGNALKFYSSIRLDIRRIGSVKEREEIIGNQT 240
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+GISR E++DL +K K+G+ F+Y + +G+
Sbjct: 241 RVKVVKNKMAPPFKQVEFDIMYGEGISRMGELVDLGVKAGIVEKSGSWFSYKSQRLGQGR 300
Query: 303 EAFKQFLVENESVREELVIKLREK--LVVD 330
E K FL E + E++ I LR+ L+ D
Sbjct: 301 ENAKTFLREKSDIAEDIEISLRQNAGLIAD 330
>gi|383389335|gb|AFH09645.1| recombinase A [Aeromonas salmonicida]
Length = 353
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 190/344 (55%), Positives = 248/344 (72%), Gaps = 5/344 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGSIM LG S T + +STGS +LD+ALG GGLP GR+VEI
Sbjct: 5 KQKALAAALGQIEKQFGKGSIMRLGDSKT-MDIEAISTGSLSLDVALGIGGLPCGRIVEI 63
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIAEAQ++G C FIDAEHALDP A +GV ++LL++QPD GEQ
Sbjct: 64 YGPESSGKTTLTLQVIAEAQKKGKVCAFIDAEHALDPIYAAKLGVNVDDLLISQPDTGEQ 123
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RS +VDV++VDSVAAL PK E++GEMGD+H+ +QARLMSQALRKL+ ++
Sbjct: 124 ALEICDMLVRSNAVDVIIVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKN 183
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
+ + IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+G+E +G++
Sbjct: 184 ANCLCIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAIKEGDEVVGNET 241
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK A+F++ +G GIS+E E++DL +KHK KAGA ++YN +GK
Sbjct: 242 RVKVVKNKVAPPFKQAEFQIFYGVGISKEGELVDLGVKHKLIDKAGAWYSYNGEKIGQGK 301
Query: 303 EAFKQFLVENESVREELVIKLREKLVV-DHKEPQTAVTDEDSTE 345
+ EN+ + E+ +LRE L+ D + V D D E
Sbjct: 302 ANVMKLFAENKVMAAEVEARLRELLLSGDAPAEKPVVADADELE 345
>gi|6226684|sp|P96185.2|RECA_XENBV RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|4220426|gb|AAD12585.1| RecA [Xenorhabdus bovienii]
Length = 358
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 198/350 (56%), Positives = 251/350 (71%), Gaps = 9/350 (2%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + + V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGENRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A+ +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIASAQREGKTCAFIDAEHALDPVYAKKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV+VVDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALSRSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+R G VK G+E +GS+
Sbjct: 185 NSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRTGSVKNGDEVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +KHK KAGA ++YN D+ +G
Sbjct: 243 TRVKVVKNKIAAPFKQAEFQILYGEGINTFGELVDLGVKHKMVEKAGAWYSYNGDKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTD-----EDSTEE 346
K +L E+ V EL KLRE L+ + +AV+D ED+ EE
Sbjct: 303 KANATIYLKEHPEVSAELDKKLRELLLNNTGGFSSAVSDYVADYEDNGEE 352
>gi|332670081|ref|YP_004453089.1| recA protein [Cellulomonas fimi ATCC 484]
gi|332339119|gb|AEE45702.1| recA protein [Cellulomonas fimi ATCC 484]
Length = 346
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/325 (56%), Positives = 250/325 (76%), Gaps = 4/325 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
++ AL+ AL QI FGKGSIM LG P V V+ TGS ALD+ALG GGLP+GR++E+
Sbjct: 7 REKALEAALSQIDRQFGKGSIMRLGDEGRP-PVEVIPTGSIALDVALGIGGLPRGRIIEV 65
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ALH +A AQ+ GG FIDAEHALDP A+ +GV T+ LL++QPD GEQ
Sbjct: 66 YGPESSGKTTVALHAVANAQKAGGIAAFIDAEHALDPEYAKKLGVDTDALLVSQPDTGEQ 125
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL ++D LIRSG++D++V+DSVAALVPK E++GEMGD+H+ +QARLMSQALRK++ +L+
Sbjct: 126 ALEIMDMLIRSGAIDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITGALNA 185
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T IFINQ+R K+ F FG P E T GG ALKFYASVR++I+RI +K+G + +G++
Sbjct: 186 SGTTAIFINQLREKIGVF-FGSP-ETTTGGKALKFYASVRMDIRRIETLKEGTDAVGNRT 243
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRGK 302
VKIVKNK+APPFK A+F++ +G GISRE +IDL ++H F K+GA +TY D+ +GK
Sbjct: 244 RVKIVKNKMAPPFKQAEFDILYGVGISREGSLIDLGVEHGFVRKSGAWYTYEGDQLGQGK 303
Query: 303 EAFKQFLVENESVREELVIKLREKL 327
E ++FL +N + +E+ K++EKL
Sbjct: 304 ENARKFLRDNPDLADEIDKKIKEKL 328
>gi|383389309|gb|AFH09632.1| recombinase A [Aeromonas salmonicida]
Length = 353
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 190/344 (55%), Positives = 248/344 (72%), Gaps = 5/344 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGSIM LG S T + +STGS +LD+ALG GGLP GR+VEI
Sbjct: 5 KQKALAAALGQIEKQFGKGSIMRLGDSKT-MDIEAISTGSLSLDVALGIGGLPCGRIVEI 63
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIAEAQ++G C FIDAEHALDP A +GV ++LL++QPD GEQ
Sbjct: 64 YGPESSGKTTLTLQVIAEAQKKGKVCAFIDAEHALDPIYAAKLGVNVDDLLISQPDTGEQ 123
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RS +VDV++VDSVAAL PK E++GEMGD+H+ +QARLMSQALRKL+ ++
Sbjct: 124 ALEICDMLVRSNAVDVIIVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKN 183
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
+ + IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+G+E +G++
Sbjct: 184 ANCLCIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAIKEGDEVVGNET 241
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK A+F++ +G GIS+E E++DL +KHK KAGA ++YN +GK
Sbjct: 242 RVKVVKNKVAPPFKQAEFQIFYGVGISKEGELVDLGVKHKLIDKAGAWYSYNGEKIGQGK 301
Query: 303 EAFKQFLVENESVREELVIKLREKLVV-DHKEPQTAVTDEDSTE 345
+ EN+ + E+ +LRE L+ D + V D D E
Sbjct: 302 ANVMKLFTENKVMAAEVEARLRELLLSGDVPAEKAVVVDADELE 345
>gi|123441181|ref|YP_001005168.1| recombinase A [Yersinia enterocolitica subsp. enterocolitica 8081]
gi|332160304|ref|YP_004296881.1| recombinase A [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
gi|386309661|ref|YP_006005717.1| recombinase A [Yersinia enterocolitica subsp. palearctica Y11]
gi|418243749|ref|ZP_12870206.1| recombinase A [Yersinia enterocolitica subsp. palearctica
PhRBD_Ye1]
gi|420257370|ref|ZP_14760130.1| recombinase A [Yersinia enterocolitica subsp. enterocolitica
WA-314]
gi|433551247|ref|ZP_20507290.1| RecA protein [Yersinia enterocolitica IP 10393]
gi|166220692|sp|A1JK01.1|RECA_YERE8 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|122088142|emb|CAL10930.1| RecA protein [Yersinia enterocolitica subsp. enterocolitica 8081]
gi|318604465|emb|CBY25963.1| RecA protein [Yersinia enterocolitica subsp. palearctica Y11]
gi|325664534|gb|ADZ41178.1| recombinase A [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
gi|330863732|emb|CBX73832.1| protein recA [Yersinia enterocolitica W22703]
gi|351776751|gb|EHB19043.1| recombinase A [Yersinia enterocolitica subsp. palearctica
PhRBD_Ye1]
gi|404515160|gb|EKA28935.1| recombinase A [Yersinia enterocolitica subsp. enterocolitica
WA-314]
gi|431788346|emb|CCO70330.1| RecA protein [Yersinia enterocolitica IP 10393]
Length = 354
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 194/348 (55%), Positives = 249/348 (71%), Gaps = 6/348 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A+ +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV++VDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+G+ +GS+
Sbjct: 185 NANTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKEGDVVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +KHK KAGA ++YN D+ +G
Sbjct: 243 TRVKVVKNKIAAPFKQAEFQILYGEGININGELVDLGVKHKLIEKAGAWYSYNGDKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVV--DHKEPQTAVTDEDSTEET 347
K +L EN +V EL KLRE L+ + ++P D +ET
Sbjct: 303 KANASNYLKENPAVAAELDKKLREMLLNGGNGEQPVATAAFADEADET 350
>gi|383817095|ref|ZP_09972478.1| recombinase A [Serratia sp. M24T3]
gi|383294078|gb|EIC82429.1| recombinase A [Serratia sp. M24T3]
Length = 354
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 194/348 (55%), Positives = 245/348 (70%), Gaps = 6/348 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A+ +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV++VDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K G+ +GS+
Sbjct: 185 NANTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAIKDGDVVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +KHK KAGA ++YN +G
Sbjct: 243 TRVKVVKNKIAAPFKQAEFQIMYGEGININGELVDLGVKHKLIEKAGAWYSYNGEKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDE--DSTEET 347
K FL EN + E+ KLR+ L+ E AVT E D ET
Sbjct: 303 KSNASNFLKENPKIASEIDKKLRDMLLSGTGELSAAVTAESLDDNAET 350
>gi|365154978|ref|ZP_09351374.1| protein recA [Bacillus smithii 7_3_47FAA]
gi|363628903|gb|EHL79604.1| protein recA [Bacillus smithii 7_3_47FAA]
Length = 351
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 183/331 (55%), Positives = 246/331 (74%), Gaps = 4/331 (1%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
M+ + AL+ AL QI FGKGSIM LG T R V V +GS ALD ALG GG P+GR+
Sbjct: 1 MNDRQAALEMALKQIEKQFGKGSIMKLGEQ-TDRKVSTVPSGSLALDAALGVGGYPRGRI 59
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+EIYGPE+SGKTT+ALH IAE Q QGG FIDAEHALDP A+ +GV + LLL+QPD
Sbjct: 60 IEIYGPESSGKTTVALHAIAEVQAQGGQAAFIDAEHALDPVYAQKLGVDIDELLLSQPDT 119
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + + L+RSG+VD++V+DSVAALVPK E++GEMGD+H+ +QARLMSQALRKLS +
Sbjct: 120 GEQALEIAEALVRSGAVDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLSGA 179
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
++ S+TI IFINQ+R K+ FG P E T GG ALKFY+S+RL ++R +K+G E +G
Sbjct: 180 INKSKTIAIFINQIREKVGVM-FGNP-ETTPGGRALKFYSSIRLEVRRAETLKQGNEMVG 237
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF- 299
++ +K+VKNK+APPF+TA ++ +G+GIS+E EIIDL + K+G+ ++YN+
Sbjct: 238 NKTRIKVVKNKVAPPFRTADVDIMYGEGISKEGEIIDLGSELDIIQKSGSWYSYNEERLG 297
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVD 330
+G+E KQFL EN +R+E++ K+RE +D
Sbjct: 298 QGRENAKQFLKENPEIRDEIMYKIREHYGLD 328
>gi|383389291|gb|AFH09623.1| recombinase A [Aeromonas salmonicida]
gi|383389297|gb|AFH09626.1| recombinase A [Aeromonas salmonicida]
gi|383389299|gb|AFH09627.1| recombinase A [Aeromonas salmonicida]
gi|383389323|gb|AFH09639.1| recombinase A [Aeromonas salmonicida]
gi|383389325|gb|AFH09640.1| recombinase A [Aeromonas salmonicida]
gi|383389333|gb|AFH09644.1| recombinase A [Aeromonas salmonicida]
gi|383389341|gb|AFH09648.1| recombinase A [Aeromonas salmonicida]
gi|383389347|gb|AFH09651.1| recombinase A [Aeromonas salmonicida]
gi|383389355|gb|AFH09655.1| recombinase A [Aeromonas salmonicida]
gi|383389357|gb|AFH09656.1| recombinase A [Aeromonas salmonicida]
gi|383389363|gb|AFH09659.1| recombinase A [Aeromonas salmonicida subsp. pectinolytica]
Length = 353
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 190/344 (55%), Positives = 248/344 (72%), Gaps = 5/344 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGSIM LG S T + +STGS +LD+ALG GGLP GR+VEI
Sbjct: 5 KQKALAAALGQIEKQFGKGSIMRLGDSKT-MDIEAISTGSLSLDVALGIGGLPCGRIVEI 63
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIAEAQ++G C FIDAEHALDP A +GV ++LL++QPD GEQ
Sbjct: 64 YGPESSGKTTLTLQVIAEAQKKGKVCAFIDAEHALDPIYAAKLGVNVDDLLISQPDTGEQ 123
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RS +VDV++VDSVAAL PK E++GEMGD+H+ +QARLMSQALRKL+ ++
Sbjct: 124 ALEICDMLVRSNAVDVIIVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKN 183
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
+ + IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+G+E +G++
Sbjct: 184 ANCLCIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAIKEGDEVVGNET 241
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK A+F++ +G GIS+E E++DL +KHK KAGA ++YN +GK
Sbjct: 242 RVKVVKNKVAPPFKQAEFQIFYGVGISKEGELVDLGVKHKLIDKAGAWYSYNGEKIGQGK 301
Query: 303 EAFKQFLVENESVREELVIKLREKLVV-DHKEPQTAVTDEDSTE 345
+ EN+ + E+ +LRE L+ D + V D D E
Sbjct: 302 ANVMKLFTENKVMAAEVEARLRELLLSGDAPAEKPVVADADELE 345
>gi|332799245|ref|YP_004460744.1| protein recA [Tepidanaerobacter acetatoxydans Re1]
gi|438002374|ref|YP_007272117.1| RecA protein [Tepidanaerobacter acetatoxydans Re1]
gi|332696980|gb|AEE91437.1| Protein recA [Tepidanaerobacter acetatoxydans Re1]
gi|432179168|emb|CCP26141.1| RecA protein [Tepidanaerobacter acetatoxydans Re1]
Length = 345
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/327 (55%), Positives = 255/327 (77%), Gaps = 3/327 (0%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
M++K+ AL+ A+ QI FGKGSIM LG + ++ +STG+ LDIALG GG+P+GRV
Sbjct: 1 MAEKEKALEMAITQIERQFGKGSIMKLGEAAARFNIEAISTGALPLDIALGVGGVPRGRV 60
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+EI+GPE+SGKTT+ALH+IAEAQ+ GG FIDAEHALDP+ A+ +GV T++LL++QPD
Sbjct: 61 IEIFGPESSGKTTVALHIIAEAQKGGGTAAFIDAEHALDPTYAKNLGVNTDDLLISQPDT 120
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + +TL+RSG+VDVVV+DSVAALVPK E++GEMGDAH+ +QARLMSQALRKLS +
Sbjct: 121 GEQALEIAETLVRSGAVDVVVIDSVAALVPKAEIEGEMGDAHVGLQARLMSQALRKLSGA 180
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
+S S T+ IFINQ+R K+ FG P E T GG ALKFY+SVRL+++RI +K+GEE +G
Sbjct: 181 ISKSNTVAIFINQLREKVGIM-FGNP-ETTPGGRALKFYSSVRLDVRRIETLKQGEEMLG 238
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF- 299
++ VK+VKNK+APPFK A+F++ +G+GISRE ++D A++ K+GA ++Y
Sbjct: 239 NRTRVKVVKNKVAPPFKQAEFDIIYGEGISREGCVLDFAVEEGLIQKSGAWYSYGKEKIG 298
Query: 300 RGKEAFKQFLVENESVREELVIKLREK 326
+G+E KQ+L E+ + +++ +++++K
Sbjct: 299 QGRENAKQYLREHPEILQDVELQVKQK 325
>gi|365880391|ref|ZP_09419764.1| Recombinase A (recA) [Bradyrhizobium sp. ORS 375]
gi|367472759|ref|ZP_09472335.1| Recombinase A (recA) [Bradyrhizobium sp. ORS 285]
gi|365274942|emb|CCD84803.1| Recombinase A (recA) [Bradyrhizobium sp. ORS 285]
gi|365291554|emb|CCD92295.1| Recombinase A (recA) [Bradyrhizobium sp. ORS 375]
Length = 362
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/345 (55%), Positives = 247/345 (71%), Gaps = 5/345 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGS+M LG++ V VSTGS LDIALG GGLPKGR+VEI
Sbjct: 16 KSKALSAALSQIERQFGKGSVMKLGKNDRSMDVETVSTGSLGLDIALGIGGLPKGRIVEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH +AEAQ++GG C FIDAEHALDP A +GV + LL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+VVDSVAALVPK EL+GEMG++ +QARLMSQALRKL+ S++
Sbjct: 136 ALEICDTLVRSGAVDVLVVDSVAALVPKAELEGEMGESLPGLQARLMSQALRKLTASINK 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ +G P E T GGNALKFYASVRL+I+RIG +K+ +E IG+
Sbjct: 196 SNTMVIFINQIRMKIGVM-YGSP-ETTTGGNALKFYASVRLDIRRIGAIKERDEVIGNST 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G+G+S+ EI+DL +K K+GA F+Y+ + +G+
Sbjct: 254 RVKVVKNKLAPPFKQVEFDIMYGEGVSKMGEILDLGVKAGIVEKSGAWFSYDSQRLGQGR 313
Query: 303 EAFKQFLVENE--SVREELVIKLREKLVVDHKEPQTAVTDEDSTE 345
E K FL N + + E I+ L+ + A D D E
Sbjct: 314 ENSKTFLKTNPDMTAKIEAAIRQNSGLIAEQILAGNAERDSDDEE 358
>gi|383389245|gb|AFH09600.1| recombinase A [Aeromonas hydrophila]
Length = 353
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/344 (54%), Positives = 248/344 (72%), Gaps = 5/344 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGSIM LG S T + +STGS +LD+ALG GGLP GR+VEI
Sbjct: 5 KQKALAAALGQIEKQFGKGSIMRLGDSKT-MDIEAISTGSLSLDVALGIGGLPCGRIVEI 63
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIAEAQ++G C F+DAEHALDP A +GV ++LL++QPD GEQ
Sbjct: 64 YGPESSGKTTLTLQVIAEAQKKGKTCAFVDAEHALDPIYAAKLGVNVDDLLISQPDTGEQ 123
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RS +VDV++VDSVAAL PK E++GEMGD+H+ +QARLMSQALRKL+ ++
Sbjct: 124 ALEICDMLVRSNAVDVIIVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKN 183
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
+ + IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+G+E +G++
Sbjct: 184 ANCLCIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAIKEGDEVVGNET 241
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK A+F++ +G GIS+E E++DL +KHK KAGA ++YN +GK
Sbjct: 242 RVKVVKNKVAPPFKQAEFQIFYGVGISKEGELVDLGVKHKLIDKAGAWYSYNGEKIGQGK 301
Query: 303 EAFKQFLVENESVREELVIKLREKLVV-DHKEPQTAVTDEDSTE 345
+ EN+ + E+ +LRE L+ D + V D D E
Sbjct: 302 ANVMKLFTENKVMAAEVEARLRELLLSGDAPAEKAVVADADELE 345
>gi|338814546|ref|ZP_08626560.1| recA protein [Acetonema longum DSM 6540]
gi|337273482|gb|EGO62105.1| recA protein [Acetonema longum DSM 6540]
Length = 348
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/341 (53%), Positives = 254/341 (74%), Gaps = 3/341 (0%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL+ A+ QI FGKGSIM LG + +V V+ TG+ +LD+ALG GG+P+GRV+EIYGP
Sbjct: 6 ALESAMRQIEKDFGKGSIMKLGEAAAKMNVEVIPTGAISLDVALGVGGVPRGRVIEIYGP 65
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTT+ALHVIAEAQ++GG FIDAEHALDP A+ +GV +NLL++QPD GEQAL
Sbjct: 66 ESSGKTTVALHVIAEAQKKGGIAAFIDAEHALDPVYAKKLGVDIDNLLISQPDHGEQALE 125
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ D L+RSG++DV+VVDSVAALVPK E++GEMGD+H+ +QARLMSQALRKL+ +S S+T
Sbjct: 126 IADALVRSGAIDVIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTGIISKSRT 185
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
IFINQ+R K+ FG P E T GG ALKFYASVRL ++R +K G + +G++ VK
Sbjct: 186 TAIFINQIREKVGVM-FGNP-ETTTGGRALKFYASVRLEVRRTESIKVGNDAVGNRTKVK 243
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGKEAF 305
+VKNK+APPFK A+F++ +G+GISRE ++D+A + + K+GA ++YN+ +G+E
Sbjct: 244 VVKNKIAPPFKQAEFDIMYGEGISREGCLVDIATELEVIDKSGAWYSYNNNRLGQGRENA 303
Query: 306 KQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEE 346
K++L N++V +E+ ++RE L+ + + E TE+
Sbjct: 304 KEYLKANKAVSDEIERRIRETLLQGNSNLKLTAATEAGTED 344
>gi|433455356|ref|ZP_20413440.1| recombinase A [Arthrobacter crystallopoietes BAB-32]
gi|432197743|gb|ELK54108.1| recombinase A [Arthrobacter crystallopoietes BAB-32]
Length = 349
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/346 (54%), Positives = 257/346 (74%), Gaps = 11/346 (3%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVV 61
+ ++ AL+ AL QI FGKGS+M LG T + +ST S ALD+ALG GGLP+GRVV
Sbjct: 5 ADREKALEAALAQIDKQFGKGSVMRLGDE-TRAPIETISTSSIALDVALGIGGLPRGRVV 63
Query: 62 EIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCG 121
EIYGPE+SGKTT+ALH +A AQR GG FIDAEHALDP A+ +GV T+ LL++QPD G
Sbjct: 64 EIYGPESSGKTTVALHAVANAQRNGGIAAFIDAEHALDPEYAKKLGVDTDALLVSQPDTG 123
Query: 122 EQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSL 181
EQAL ++D L+ SGS+D+VV+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ L
Sbjct: 124 EQALEIMDMLVGSGSLDIVVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITGRL 183
Query: 182 SLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGS 241
S S+T IFINQ+R K+ F FG P E T GG ALKFYASVR++++RI +K+G +G+
Sbjct: 184 SQSKTTAIFINQLREKIGVF-FGSP-ETTTGGKALKFYASVRIDVRRIETLKEGANPVGN 241
Query: 242 QIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFR 300
+ KIVKNK+APPFK A+F++ +G+GISRE +ID+ ++H K+GA FTY+ D+ +
Sbjct: 242 RTRAKIVKNKMAPPFKQAEFDILYGQGISREGGLIDMGVEHSLVKKSGAWFTYDGDQLGQ 301
Query: 301 GKEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEE 346
GKE ++FL +N + +EL K+R+KL +D T+E++ EE
Sbjct: 302 GKENARKFLKDNPDLADELERKIRQKLGIDK-------TEEEAVEE 340
>gi|429097655|ref|ZP_19159761.1| RecA protein [Cronobacter dublinensis 582]
gi|426283995|emb|CCJ85874.1| RecA protein [Cronobacter dublinensis 582]
Length = 717
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 197/342 (57%), Positives = 244/342 (71%), Gaps = 5/342 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG T V +STGS +LDIALG GGLP GR+VE
Sbjct: 369 NKQKALAAALGQIEKQFGKGSIMRLGEDRT-MDVETISTGSLSLDIALGAGGLPMGRIVE 427
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR G C FIDAEHALDP A +GV +NLL +QPD GE
Sbjct: 428 IYGPESSGKTTLTLQVIAAAQRAGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGE 487
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV+VVDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 488 QALEICDALARSGAVDVLVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 547
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+GEE +GS+
Sbjct: 548 NSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKEGEEVVGSE 605
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +KHK KAGA ++YN +G
Sbjct: 606 TRVKVVKNKVAAPFKQAEFQILYGEGINFYGELVDLGVKHKLIEKAGAWYSYNGEKIGQG 665
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKE-PQTAVTDED 342
K FL EN+ + +E+ KLRE L+ + P V D D
Sbjct: 666 KANATNFLKENKPMADEIEKKLREMLLNNQDSTPDFTVDDND 707
>gi|259909420|ref|YP_002649776.1| recombinase A [Erwinia pyrifoliae Ep1/96]
gi|387872402|ref|YP_005803784.1| recombinase A [Erwinia pyrifoliae DSM 12163]
gi|224965042|emb|CAX56573.1| Recombinase A [Erwinia pyrifoliae Ep1/96]
gi|283479497|emb|CAY75413.1| Recombinase A [Erwinia pyrifoliae DSM 12163]
Length = 355
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 190/327 (58%), Positives = 241/327 (73%), Gaps = 4/327 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG T V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRT-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A+ +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQRKGKTCAFIDAEHALDPVYAKKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV++VDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALARSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+G+E +GS+
Sbjct: 185 NSGTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAIKEGDEVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +KHK KAGA ++YN D+ +G
Sbjct: 243 TRVKVVKNKVAAPFKQAEFQIMYGEGINIHGELVDLGVKHKLIEKAGAWYSYNGDKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLV 328
K FL EN ++ E+ KLR L+
Sbjct: 303 KANAGNFLKENPAIANEIDAKLRAMLL 329
>gi|421081332|ref|ZP_15542246.1| RecA protein [Pectobacterium wasabiae CFBP 3304]
gi|401704342|gb|EJS94551.1| RecA protein [Pectobacterium wasabiae CFBP 3304]
Length = 357
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 195/346 (56%), Positives = 245/346 (70%), Gaps = 6/346 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A+ +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV++VDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+R G +K GEE +GS+
Sbjct: 185 QANTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRTGAIKDGEEVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +KHK KAGA ++YN D+ +G
Sbjct: 243 TRVKVVKNKVAAPFKQAEFQILYGEGINIHGELVDLGVKHKLIEKAGAWYSYNGDKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKE--PQTAVTDEDSTE 345
K FL EN ++ EL KLRE L+ E P A D E
Sbjct: 303 KANACNFLKENPAIAAELDKKLREMLLHKGNELTPAAAGNSHDEDE 348
>gi|192362324|ref|YP_001982693.1| recombinase A [Cellvibrio japonicus Ueda107]
gi|190688489|gb|ACE86167.1| recA protein [Cellvibrio japonicus Ueda107]
Length = 353
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 184/328 (56%), Positives = 244/328 (74%), Gaps = 4/328 (1%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVV 61
+ K+ ALQ AL QI FGKG++M +G +P +STGS LD+ALG GGLPKGR++
Sbjct: 8 ANKEKALQAALGQIERQFGKGTVMRMGDR-EQMVIPAISTGSLGLDVALGIGGLPKGRII 66
Query: 62 EIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCG 121
EIYGPE+SGKTTL L VIAEAQRQGG C FIDAEHALDP A +GV +L+++QPD G
Sbjct: 67 EIYGPESSGKTTLTLQVIAEAQRQGGTCAFIDAEHALDPIYATKLGVNVGDLIVSQPDTG 126
Query: 122 EQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSL 181
EQAL + D L+RSG++DV+VVDSVAAL P+ E++GEMGD H+ +QARLMSQALRK++ ++
Sbjct: 127 EQALEVTDMLVRSGAIDVLVVDSVAALTPRAEIEGEMGDHHVGLQARLMSQALRKITGNI 186
Query: 182 SLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGS 241
+ ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+R+G VK+GEE IGS
Sbjct: 187 KNANCLVIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRVGAVKEGEEVIGS 244
Query: 242 QIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-R 300
+ VK+VKNK+APPFK A+F++ +G GI+R EI+D +K KAGA ++Y +
Sbjct: 245 ETRVKVVKNKVAPPFKQAEFQILYGSGINRMGEIVDYGVKLGLIDKAGAWYSYQGNKIGQ 304
Query: 301 GKEAFKQFLVENESVREELVIKLREKLV 328
GK +FL EN+++ +EL K+R +L+
Sbjct: 305 GKNNVIKFLQENQAIAQELEQKVRSELL 332
>gi|269795614|ref|YP_003315069.1| protein RecA [Sanguibacter keddieii DSM 10542]
gi|269097799|gb|ACZ22235.1| protein RecA [Sanguibacter keddieii DSM 10542]
Length = 359
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/329 (57%), Positives = 249/329 (75%), Gaps = 4/329 (1%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVV 61
+ ++ AL+ AL QI +FGKGSIM LG V V+ TGS ALDIALG GGLP+GRVV
Sbjct: 5 ADREKALEAALAQIDRNFGKGSIMRLGEDGRA-PVEVIPTGSIALDIALGIGGLPRGRVV 63
Query: 62 EIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCG 121
E+YGPE+SGKTT+ALH +A AQR GG FIDAEHALDP A+ +GV T+ LL++QPD G
Sbjct: 64 EVYGPESSGKTTVALHAVASAQRNGGIAAFIDAEHALDPDYAKKLGVDTDALLVSQPDTG 123
Query: 122 EQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSL 181
EQAL + D LIRSG++D++V+DSVAALVPK E++GEMGD+H+ +QARLMSQALRK++ +L
Sbjct: 124 EQALEIADMLIRSGAIDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITGAL 183
Query: 182 SLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGS 241
S S T IFINQ+R K+ FG P E T GG ALKFYASVRL+I+RI +K+G E +G+
Sbjct: 184 SSSGTTAIFINQLREKIGVM-FGSP-ETTTGGKALKFYASVRLDIRRIETLKEGTEPVGN 241
Query: 242 QIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFR 300
+ VK+VKNK+APPFK A+F++ +G GISRE +ID+ ++H F K+G+ FTY+ D+ +
Sbjct: 242 RTRVKVVKNKMAPPFKQAEFDILYGHGISREGGLIDMGVEHGFVRKSGSWFTYDGDQLGQ 301
Query: 301 GKEAFKQFLVENESVREELVIKLREKLVV 329
GKE + FL +N + EL +++EKL V
Sbjct: 302 GKENARTFLKDNPDLANELEKRIKEKLGV 330
>gi|407647169|ref|YP_006810928.1| recombinase A [Nocardia brasiliensis ATCC 700358]
gi|407310053|gb|AFU03954.1| recombinase A [Nocardia brasiliensis ATCC 700358]
Length = 346
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/325 (55%), Positives = 251/325 (77%), Gaps = 4/325 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
+D AL+ AL Q+ SFGKG++M LG V + + V+ TGS +LD+ALG GGLP+GR++E+
Sbjct: 8 RDKALELALAQVEKSFGKGAVMRLGEEVR-QPLAVIPTGSISLDVALGIGGLPRGRIIEV 66
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ALH +A AQ QGG FIDAEHALDP A+ +GV T+ LL++QPD GEQ
Sbjct: 67 YGPESSGKTTVALHAVANAQAQGGIAAFIDAEHALDPEYAKKLGVDTDALLVSQPDTGEQ 126
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RSG++D++V+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ +LS
Sbjct: 127 ALEIADMLVRSGAIDIIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTGALSN 186
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T IFINQ+R K+ FG P E T GG ALKFYASVRL+++RI +K G + +G++
Sbjct: 187 SNTTAIFINQLREKIGVM-FGSP-ETTTGGKALKFYASVRLDVRRIETLKDGTDAVGNRT 244
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRGK 302
VK+VKNK++PPFK A+F++ +G GIS+E +ID+ ++H F K+G+ +TY D+ +GK
Sbjct: 245 RVKVVKNKVSPPFKQAEFDILYGHGISKEGSLIDMGVEHGFVRKSGSWYTYEGDQLGQGK 304
Query: 303 EAFKQFLVENESVREELVIKLREKL 327
E ++FL+EN VR+E+ K++EKL
Sbjct: 305 ENARKFLLENTDVRDEIEKKIKEKL 329
>gi|332532867|ref|ZP_08408740.1| protein RecA [Pseudoalteromonas haloplanktis ANT/505]
gi|332037713|gb|EGI74164.1| protein RecA [Pseudoalteromonas haloplanktis ANT/505]
Length = 347
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/327 (57%), Positives = 247/327 (75%), Gaps = 4/327 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGSIM LG + ++ VSTGS +DIALG GGLP GR+VE+
Sbjct: 5 KQKALDAALSQIERQFGKGSIMKLGDN-KALNIESVSTGSLGIDIALGIGGLPMGRIVEV 63
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIAEAQ++G C FIDAEHALDP A+ +GV ++L ++QPD GEQ
Sbjct: 64 YGPESSGKTTLTLQVIAEAQKEGKTCAFIDAEHALDPVYAQKLGVNIDDLFVSQPDTGEQ 123
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RS +VDVV++DSVAAL PK E++G+MGD+HM +QARLMSQALRKL+ ++
Sbjct: 124 ALEICDMLVRSSAVDVVIIDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTGNIKR 183
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T+ IFINQ+R K+ FG P E T GGNALKFYASVR++I+RIG VK+G+E +G++
Sbjct: 184 SNTLCIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRIDIRRIGSVKEGDEVVGNET 241
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGK 302
VKIVKNK+APPFK A+F + +G+GIS++ E+IDL +KHK KAGA ++Y+ ++ +GK
Sbjct: 242 RVKIVKNKVAPPFKQAEFIIMYGEGISKQGELIDLGVKHKIVEKAGAWYSYSGNKVGQGK 301
Query: 303 EAFKQFLVENESVREELVIKLREKLVV 329
+FL EN + +E+ KLRE L++
Sbjct: 302 SNSIKFLKENPEIADEIEGKLREMLLL 328
>gi|296454323|ref|YP_003661466.1| recA protein [Bifidobacterium longum subsp. longum JDM301]
gi|296183754|gb|ADH00636.1| recA protein [Bifidobacterium longum subsp. longum JDM301]
Length = 397
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 184/323 (56%), Positives = 250/323 (77%), Gaps = 4/323 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K+ AL AL Q+ SFGKGS M LG ++V V+ TGS ALD+ALG GGLPKGR+VE
Sbjct: 22 KRKAALDTALAQVEKSFGKGSAMRLGDQ-PEQNVEVIPTGSLALDMALGIGGLPKGRIVE 80
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTLALHV+A AQ++GG +IDAEHALDP+ A +GV T++L+++QPD GE
Sbjct: 81 IYGPESSGKTTLALHVVANAQKKGGVAAYIDAEHALDPAYARKLGVDTDSLIVSQPDNGE 140
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D LIRSG++DV+V+DSVAALVPK E++GEMGD+H+ +QARLMSQALRK++ +L+
Sbjct: 141 QALEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKMTGALA 200
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ T IFINQ+R K+ F FG P E T GG ALKFYASVRL+I+RI +K G+E +G++
Sbjct: 201 QAGTTAIFINQLREKIGVF-FGNP-ETTTGGKALKFYASVRLDIRRIQTLKNGDEAVGNR 258
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRG 301
VK+VKNK+APPFK+A+F++ +G+GISRE +ID+A + K+G+ FTY D+ +G
Sbjct: 259 TRVKVVKNKMAPPFKSAEFDMLYGEGISREGSVIDMAQQVGVVKKSGSWFTYEGDQLGQG 318
Query: 302 KEAFKQFLVENESVREELVIKLR 324
+E +QFL +N ++ EE+ K++
Sbjct: 319 REKVRQFLKDNPAITEEIENKVK 341
>gi|387127527|ref|YP_006296132.1| recombinase A [Methylophaga sp. JAM1]
gi|386274589|gb|AFI84487.1| RecA protein [Methylophaga sp. JAM1]
Length = 346
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/322 (56%), Positives = 242/322 (75%), Gaps = 3/322 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKG++M LG R + VSTGS LD+ALG GGLP+GRVVEI
Sbjct: 5 KKKALGAALGQIEKQFGKGAVMRLGDGTAHRDIDAVSTGSIGLDVALGIGGLPRGRVVEI 64
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL LH IAE Q+ GG F+DAEHALDP AE +GV ++LL++QPD GEQ
Sbjct: 65 YGPESSGKTTLTLHAIAEMQKLGGTAAFVDAEHALDPLYAEKLGVNIDDLLVSQPDTGEQ 124
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RSG+VD+VVVDSVAAL PK E++G+MGD+HM +QARLMSQALRKL+ ++
Sbjct: 125 ALEITDMLVRSGAVDIVVVDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTANIKR 184
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +KKG+E +G++
Sbjct: 185 SNTLVIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAIKKGDEILGNET 242
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGK 302
VK+VKNK+APPFK +F++ +G+GISRE E+IDL + K+GA ++Y+ +R +GK
Sbjct: 243 RVKVVKNKVAPPFKQVEFDILYGEGISREGELIDLGVSENIVEKSGAWYSYDGNRIGQGK 302
Query: 303 EAFKQFLVENESVREELVIKLR 324
+ + +L E+ + +++ K+R
Sbjct: 303 DNVRIYLKEHPEMAKDIEAKIR 324
>gi|23465975|ref|NP_696578.1| recombinase A [Bifidobacterium longum NCC2705]
gi|239621261|ref|ZP_04664292.1| protein recA [Bifidobacterium longum subsp. infantis CCUG 52486]
gi|30316236|sp|Q8G4G9.1|RECA_BIFLO RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|23326690|gb|AAN25214.1| RecA protein [Bifidobacterium longum NCC2705]
gi|239515722|gb|EEQ55589.1| protein recA [Bifidobacterium longum subsp. infantis CCUG 52486]
Length = 397
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 184/323 (56%), Positives = 250/323 (77%), Gaps = 4/323 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K+ AL AL Q+ SFGKGS M LG ++V V+ TGS ALD+ALG GGLPKGR+VE
Sbjct: 22 KRKAALDTALAQVEKSFGKGSAMRLGDQ-PEQNVEVIPTGSLALDMALGIGGLPKGRIVE 80
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTLALHV+A AQ++GG +IDAEHALDP+ A +GV T++L+++QPD GE
Sbjct: 81 IYGPESSGKTTLALHVVANAQKKGGVAAYIDAEHALDPAYARKLGVDTDSLIVSQPDNGE 140
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D LIRSG++DV+V+DSVAALVPK E++GEMGD+H+ +QARLMSQALRK++ +L+
Sbjct: 141 QALEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKMTGALA 200
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ T IFINQ+R K+ F FG P E T GG ALKFYASVRL+I+RI +K G+E +G++
Sbjct: 201 QAGTTAIFINQLREKIGVF-FGNP-ETTTGGKALKFYASVRLDIRRIQTLKNGDEAVGNR 258
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRG 301
VK+VKNK+APPFK+A+F++ +G+GISRE +ID+A + K+G+ FTY D+ +G
Sbjct: 259 TRVKVVKNKMAPPFKSAEFDMLYGEGISREGSVIDMAQQVGVVKKSGSWFTYEGDQLGQG 318
Query: 302 KEAFKQFLVENESVREELVIKLR 324
+E +QFL +N ++ EE+ K++
Sbjct: 319 REKVRQFLKDNPAITEEIENKVK 341
>gi|312139381|ref|YP_004006717.1| recombinase a [Rhodococcus equi 103S]
gi|325672738|ref|ZP_08152434.1| recombination protein A [Rhodococcus equi ATCC 33707]
gi|311888720|emb|CBH48032.1| recombinase A [Rhodococcus equi 103S]
gi|325556615|gb|EGD26281.1| recombination protein A [Rhodococcus equi ATCC 33707]
Length = 345
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/343 (53%), Positives = 257/343 (74%), Gaps = 9/343 (2%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
+D AL+ AL QI SFGKGS+M LG + + V+ TGS ALD+ALG GGLP+GRVVEI
Sbjct: 8 RDKALELALAQIDKSFGKGSVMRLGEEAR-QPIAVIPTGSIALDVALGIGGLPRGRVVEI 66
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ALH +A AQ GG FIDAEHALDP A +GV T+ LL++QPD GEQ
Sbjct: 67 YGPESSGKTTVALHAVANAQANGGVAAFIDAEHALDPEYARKLGVDTDALLVSQPDTGEQ 126
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D LIRSG++D++V+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ +L+
Sbjct: 127 ALEIADMLIRSGALDIIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTGALNN 186
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T IFINQ+R K+ FG P E T GG ALKFY+SVRL+++RI +K G + +G++
Sbjct: 187 SGTTAIFINQLREKIGVM-FGSP-ETTTGGKALKFYSSVRLDVRRIETLKDGTDAVGNRT 244
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRGK 302
VK+VKNK++PPFK A+F++ +G+GIS+E +ID+ ++H F K+G+ +TY D+ +GK
Sbjct: 245 RVKVVKNKVSPPFKQAEFDILYGQGISKEGSLIDMGVEHGFIRKSGSWYTYEGDQLGQGK 304
Query: 303 EAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTE 345
E ++FL+EN +R+E+ K++EKL + +TDED+ +
Sbjct: 305 ENARKFLLENTDIRDEIEKKIKEKLGIG-----AVLTDEDAEQ 342
>gi|218325541|emb|CAV24649.1| recombinase A [Agrobacterium tumefaciens]
Length = 323
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/318 (58%), Positives = 240/318 (75%), Gaps = 3/318 (0%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL+ AL QI SFGKGSIM LG + V VSTGS +LDIALG GGLPKGR++EIYGP
Sbjct: 8 ALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGRIIEIYGP 67
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTTLAL IAEAQ++GG C F+DAEHALDP A +GV + LL++QPD GEQAL
Sbjct: 68 ESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQGLLISQPDTGEQALE 127
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ DTL+RSG+VDV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S S+
Sbjct: 128 ITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISKSKC 187
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+ EE +G+Q VK
Sbjct: 188 MVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSVKEREEVVGNQTRVK 245
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGKEAF 305
+VKNK+APPFK +F++ +G+G+S+ E++DL +K K+GA F+YN + +G+E
Sbjct: 246 VVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQGRENA 305
Query: 306 KQFLVENESVREELVIKL 323
K FL +N E+ + L
Sbjct: 306 KIFLRDNPETANEIELAL 323
>gi|410666362|ref|YP_006918733.1| recombinase A [Simiduia agarivorans SA1 = DSM 21679]
gi|409028719|gb|AFV01004.1| recombinase A [Simiduia agarivorans SA1 = DSM 21679]
Length = 347
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/348 (54%), Positives = 254/348 (72%), Gaps = 5/348 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K+ ALQ AL QI FGKG++M +G +P +STGS LD+ALG GGLPKGR+VE
Sbjct: 4 NKEKALQAALSQIERQFGKGTVMRMGDR-EQVAIPSISTGSLGLDVALGIGGLPKGRIVE 62
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIAEAQ+ GG C F+DAEHALDP AE +GV + L+++QPD GE
Sbjct: 63 IYGPESSGKTTLTLQVIAEAQKAGGVCAFVDAEHALDPIYAEKLGVNVDELIVSQPDTGE 122
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L+RSG+VDV+VVDSVAAL PK E++GEMGD H+ +QARLMSQALRK++ ++
Sbjct: 123 QALEVADMLVRSGAVDVLVVDSVAALTPKAEIEGEMGDHHVGLQARLMSQALRKITGNIK 182
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ + IFINQ+R K+ FG P E T GGNALKFY+SVRL+I+R G VK G+E IG++
Sbjct: 183 NANCLAIFINQIRMKIGVM-FGNP-ETTTGGNALKFYSSVRLDIRRTGAVKDGDEVIGNE 240
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRG 301
VK+VKNK+APPFK A+F++ +G+GI+ + EIID +K KAGA ++Y D+ +G
Sbjct: 241 TRVKVVKNKVAPPFKQAEFQILYGQGINLQGEIIDFGVKLGLIDKAGAWYSYKGDKIGQG 300
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETVS 349
K +FL+EN +++E+ ++R +L + K T+ +DED+ EE S
Sbjct: 301 KNNVVKFLLENPDIQKEIETQVRAEL-LGGKVKATSSSDEDAVEEMDS 347
>gi|347542477|ref|YP_004857114.1| recombinase A [Candidatus Arthromitus sp. SFB-rat-Yit]
gi|346985513|dbj|BAK81188.1| recombinase A [Candidatus Arthromitus sp. SFB-rat-Yit]
Length = 356
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/345 (52%), Positives = 260/345 (75%), Gaps = 4/345 (1%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
A++ A+ QI +GKGSIM LG + ++ VSTG LDIALG GGLPKGR++E+YGP
Sbjct: 10 AIEIAMSQIEKQYGKGSIMKLGEQ-SALNIESVSTGCLDLDIALGIGGLPKGRIIEVYGP 68
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTT+ALHVIAEAQ++GG FIDAEHALDPS A+ +GV TENL+++QPD GEQAL
Sbjct: 69 ESSGKTTVALHVIAEAQKKGGAAAFIDAEHALDPSYAKNLGVDTENLIISQPDNGEQALE 128
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ + L+RSG++DV+V+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRKL+ ++ S+
Sbjct: 129 IAEALVRSGAIDVIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLAGHINKSKC 188
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
+ IFINQ+R K+ FG P E T GG ALKFYASVRL+++RI +K+G+E +G++ VK
Sbjct: 189 VAIFINQLREKVGVM-FGNP-ETTPGGRALKFYASVRLDVRRIDSIKQGDEIVGNRTRVK 246
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRGKEAF 305
I+KNK+APPF+ ++F++ + KGIS+E ++DLA+K K+G+ F+Y N++ +G+E
Sbjct: 247 IMKNKVAPPFRISEFDIIYNKGISKEGSLLDLAVKENIIQKSGSWFSYKNEKLGQGRENA 306
Query: 306 KQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETVST 350
KQFL+EN+++ E+ + EK + + + D D E +V++
Sbjct: 307 KQFLLENKAILREIETLILEKYNIAKSDNSDEIKDIDKKETSVNS 351
>gi|225351347|ref|ZP_03742370.1| hypothetical protein BIFPSEUDO_02941 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
gi|225157691|gb|EEG70974.1| hypothetical protein BIFPSEUDO_02941 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
Length = 394
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/360 (53%), Positives = 262/360 (72%), Gaps = 11/360 (3%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
++ AL AL Q+ SFGKGS M LG + V V+ TGS ALD+ALG GGLPKGR+VE
Sbjct: 22 RRQAALDTALAQVEKSFGKGSAMRLGDR-PEQDVEVIPTGSLALDMALGIGGLPKGRIVE 80
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTLALHV+A AQ+ GG FIDAEHALDP A +GV T++L+++QPD GE
Sbjct: 81 IYGPESSGKTTLALHVVANAQKNGGVAAFIDAEHALDPVYARKLGVDTDSLIVSQPDNGE 140
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D LIRSG++DV+V+DSVAALVPK E++GEMGD+H+ +QARLMSQALRK++ +L+
Sbjct: 141 QALEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKMTGALA 200
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ T IFINQ+R K+ F FG P E T GG ALKFY+SVR++I+RI +K G+E +G++
Sbjct: 201 QAGTTAIFINQLREKIGVF-FGNP-ETTTGGKALKFYSSVRMDIRRIQTIKNGDEAVGNR 258
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRG 301
VK+VKNK+APPFKTA+F++ +G+GIS+E ++D+AL+ K+G+ FTY D+ +G
Sbjct: 259 TKVKVVKNKMAPPFKTAEFDVLYGEGISKEGSVLDMALQVNVVKKSGSWFTYGGDQLGQG 318
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETVSTISPDSTDEEAA 361
+E +QFL +N + EE+ K++ + + Q A ED E + S ++T EE A
Sbjct: 319 RENVRQFLKDNPELTEEIENKVKAEFGLIEPTDQFA---EDGNEASAS----NATSEEKA 371
>gi|269140204|ref|YP_003296905.1| recombinase A [Edwardsiella tarda EIB202]
gi|387868722|ref|YP_005700191.1| recombinase A [Edwardsiella tarda FL6-60]
gi|267985865|gb|ACY85694.1| RecA/RadA recombinase [Edwardsiella tarda EIB202]
gi|304560035|gb|ADM42699.1| RecA [Edwardsiella tarda FL6-60]
Length = 353
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 188/330 (56%), Positives = 248/330 (75%), Gaps = 5/330 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + T + +STGS +LD+ALG GGLP GRVVE
Sbjct: 4 NKQRALAAALGQIEKQFGKGSIMRLGDTQT-LDIESISTGSLSLDVALGIGGLPMGRVVE 62
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
I+GPE+SGKTTL L VIA AQ G C FIDAEHALDP A +GV ++LL++QPD GE
Sbjct: 63 IFGPESSGKTTLTLSVIARAQAAGKTCAFIDAEHALDPIYAAKLGVNVDDLLVSQPDTGE 122
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L+RSG+VDV++VDSVAAL PK E++GEMGD+H+ +QARLMSQALRKL+ ++
Sbjct: 123 QALEICDALVRSGAVDVIIVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIK 182
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ +++FINQ+R K+ FG P E T GGNALKFY+SVRL+I+RIG +K+G+E +G++
Sbjct: 183 NANCLVVFINQIRMKIGVM-FGNP-ETTTGGNALKFYSSVRLDIRRIGAIKEGDEVVGNE 240
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+APPF+ A+F++ +G GIS+ESE+IDL +KHK K+GA ++YN D+ +G
Sbjct: 241 TRVKVVKNKVAPPFRQAEFQILYGAGISKESELIDLGVKHKLLDKSGAWYSYNGDKIGQG 300
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDH 331
K +FL EN ++ EL KLRE L++ H
Sbjct: 301 KANSMKFLQENTTISAELEGKLRE-LLLSH 329
>gi|313140550|ref|ZP_07802743.1| protein recA [Bifidobacterium bifidum NCIMB 41171]
gi|313133060|gb|EFR50677.1| protein recA [Bifidobacterium bifidum NCIMB 41171]
Length = 396
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 188/348 (54%), Positives = 259/348 (74%), Gaps = 8/348 (2%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
++ AL AL+Q+ SFGKGS M LG ++V V+ TGS ALD+ALG GGLPKGR+VE
Sbjct: 36 RRKAALDSALEQVEKSFGKGSAMRLGDK-PEQNVEVIPTGSLALDLALGIGGLPKGRIVE 94
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTLALHV+A AQ+ GG FIDAEHALDP A +GV T++L+++QPD GE
Sbjct: 95 IYGPESSGKTTLALHVVANAQKNGGVAAFIDAEHALDPVYARHLGVDTDSLIVSQPDNGE 154
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D LIRSG++DV+V+DSVAALVPK E++G+MGD+H+ +QARLMSQALRK++ +L+
Sbjct: 155 QALEIADMLIRSGALDVIVIDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKMTGALA 214
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ T IFINQ+R K+ F FG P E T GG ALKFYASVRL+I+RI +K GEE +G++
Sbjct: 215 QAGTTAIFINQLREKIGVF-FGNP-ETTTGGKALKFYASVRLDIRRIQTIKNGEEAVGNR 272
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+APPFK+A+F++ +G+GIS+E ++D+AL+ K+G+ FTY+ D+ +G
Sbjct: 273 TKVKVVKNKMAPPFKSAEFDVLYGEGISKEGSVLDMALQCNVVKKSGSWFTYDGDQLGQG 332
Query: 302 KEAFKQFLVENESVREELVIKLREKL----VVDHKEPQTAVTDEDSTE 345
+E ++FL +N + EE+ K++ + V D + TD D+ E
Sbjct: 333 RENVRKFLKDNPQITEEIGNKVKAEFGLIEVPDQLVDGESATDGDAPE 380
>gi|399545596|ref|YP_006558904.1| protein RecA [Marinobacter sp. BSs20148]
gi|399160928|gb|AFP31491.1| Protein RecA [Marinobacter sp. BSs20148]
Length = 371
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/324 (57%), Positives = 242/324 (74%), Gaps = 6/324 (1%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRH-VPVVSTGSFALDIALGTGGLPKGRVVEIYG 65
AL AL QI FGKG+IM +G PR +P VSTGS LD+ALG GGLP GRV EIYG
Sbjct: 8 ALSAALTQIERQFGKGAIMKMGDH--PREAIPSVSTGSLGLDVALGIGGLPYGRVCEIYG 65
Query: 66 PEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQAL 125
PE+SGKTTL L VIAEAQ+QG C F+DAEHALDP AE +GV + LL++QPD GEQAL
Sbjct: 66 PESSGKTTLTLQVIAEAQKQGKTCAFVDAEHALDPQYAEKLGVNVDELLVSQPDTGEQAL 125
Query: 126 SLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQ 185
+ D L+RS +VDV++VDSVAAL PK E++GEMGD+H+ +QARLMSQALRKL+ ++ +
Sbjct: 126 EICDMLVRSNAVDVIIVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLNGNVKNAN 185
Query: 186 TILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAV 245
+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK G+E G++ V
Sbjct: 186 VLLIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAVKDGDEVTGNETRV 243
Query: 246 KIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGKEA 304
K+VKNK+APPF+ A+F++ +GKGI R +E++D+ +K F KAGA + YN D+ +GK
Sbjct: 244 KVVKNKVAPPFRQAEFQILYGKGIYRMAEVVDMGVKEGFVDKAGAWYAYNGDKIGQGKAN 303
Query: 305 FKQFLVENESVREELVIKLREKLV 328
+FL EN + +E+ K+R+KL+
Sbjct: 304 ACKFLEENLEMAKEIETKVRDKLM 327
>gi|238786912|ref|ZP_04630713.1| hypothetical protein yfred0001_18870 [Yersinia frederiksenii ATCC
33641]
gi|238725280|gb|EEQ16919.1| hypothetical protein yfred0001_18870 [Yersinia frederiksenii ATCC
33641]
Length = 369
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/348 (56%), Positives = 247/348 (70%), Gaps = 6/348 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 21 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 79
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR G C FIDAEHALDP A+ +GV +NLL +QPD GE
Sbjct: 80 IYGPESSGKTTLTLQVIAAAQRAGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGE 139
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV++VDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 140 QALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 199
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+G+ +GS+
Sbjct: 200 NANTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKEGDVVVGSE 257
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +KHK KAGA ++YN D+ +G
Sbjct: 258 TRVKVVKNKIAAPFKQAEFQILYGEGININGELVDLGVKHKLIEKAGAWYSYNGDKIGQG 317
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTD--EDSTEET 347
K +L EN +V EL KLRE L+ Q T D T+ET
Sbjct: 318 KANASNYLKENPAVAAELDKKLREMLLNGGNGEQAVTTAAFADETDET 365
>gi|238761733|ref|ZP_04622708.1| hypothetical protein ykris0001_12160 [Yersinia kristensenii ATCC
33638]
gi|238700247|gb|EEP92989.1| hypothetical protein ykris0001_12160 [Yersinia kristensenii ATCC
33638]
Length = 354
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 194/348 (55%), Positives = 248/348 (71%), Gaps = 6/348 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A+ +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV++VDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK G+ +GS+
Sbjct: 185 NANTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKDGDVVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +KHK KAGA ++YN D+ +G
Sbjct: 243 TRVKVVKNKIAAPFKQAEFQILYGEGININGELVDLGVKHKLIEKAGAWYSYNGDKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVV--DHKEPQTAVTDEDSTEET 347
K +L EN +V EL KLRE L+ + ++P D +ET
Sbjct: 303 KANASNYLKENPAVAAELDKKLREMLLNGGNGEQPVATAVLADEADET 350
>gi|410478671|ref|YP_006766308.1| recombinase A [Leptospirillum ferriphilum ML-04]
gi|424869559|ref|ZP_18293256.1| RecA protein [Leptospirillum sp. Group II 'C75']
gi|124514183|gb|EAY55698.1| RecA protein [Leptospirillum rubarum]
gi|387220610|gb|EIJ75269.1| RecA protein [Leptospirillum sp. Group II 'C75']
gi|406773923|gb|AFS53348.1| RecA protein [Leptospirillum ferriphilum ML-04]
Length = 360
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 184/330 (55%), Positives = 253/330 (76%), Gaps = 7/330 (2%)
Query: 3 KKDLALQQALD----QITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKG 58
++D A Q++LD QI FGKGSIM LG+ P++VPV+ +GS ALDIALG GG P+G
Sbjct: 4 ERDQARQKSLDLAVSQIEKQFGKGSIMRLGKDQVPQNVPVIPSGSLALDIALGIGGYPRG 63
Query: 59 RVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQP 118
RVVE+YGPE+SGKTTLALH I+E + GG FIDAEHALD + A+ +GV+TE+LL+AQP
Sbjct: 64 RVVELYGPESSGKTTLALHAISEVHKAGGVAAFIDAEHALDVTYAKRLGVRTEDLLIAQP 123
Query: 119 DCGEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLS 178
D GEQAL + +TL+RSGS+D++VVDSVAALVP+ EL+GEMGDAH+ +QARLMSQALRKL+
Sbjct: 124 DTGEQALEITETLVRSGSIDLIVVDSVAALVPRAELEGEMGDAHVGLQARLMSQALRKLT 183
Query: 179 HSLSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEET 238
++S S T ++FINQ+R K+ FG P E T GGNALKFYASVR++I+RI +K+G++
Sbjct: 184 SAISKSNTTVLFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRMDIRRIESIKEGDQV 241
Query: 239 IGSQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDR 297
+G++I VK+VKNK+APPF+ A+F++ F +GIS E+IDL + H K+GA ++ N+R
Sbjct: 242 LGNRIRVKVVKNKMAPPFRQAEFDISFNEGISTVGELIDLGVDHGILEKSGAWYSIGNER 301
Query: 298 NFRGKEAFKQFLVENESVREELVIKLREKL 327
+GKEA K +L + +++ ++R K+
Sbjct: 302 LGQGKEAVKLYLKTHPEAFKKIEQEIRSKI 331
>gi|299131743|ref|ZP_07024938.1| recA protein [Afipia sp. 1NLS2]
gi|298591880|gb|EFI52080.1| recA protein [Afipia sp. 1NLS2]
Length = 360
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/323 (57%), Positives = 243/323 (75%), Gaps = 3/323 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGS+M LG++ + V+S+GS LDIALG GGLPKGRVVEI
Sbjct: 16 KTKALTAALSQIERQFGKGSVMRLGKADRSMDIEVISSGSLGLDIALGVGGLPKGRVVEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH +AEAQ++GG C FIDAEHALDP A +GV + LL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALHTVAEAQKKGGTCAFIDAEHALDPVYARKLGVNVDELLISQPDHGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV++VDSVAALVP+ EL+GEMGDA +QARLMSQALRKL+ S++
Sbjct: 136 ALEIADTLVRSGAVDVLIVDSVAALVPRAELEGEMGDALPGLQARLMSQALRKLTASINK 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ +G P E T GGNALKFYASVRL+I+RIG +K+ +E IG+
Sbjct: 196 SHTMVIFINQIRMKIGVM-YGSP-ETTTGGNALKFYASVRLDIRRIGAIKERDEVIGNST 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G+G+S+ EI+DL +K K+GA F+Y+ + +G+
Sbjct: 254 RVKVVKNKLAPPFKQVEFDIMYGEGVSKMGEILDLGVKAGIVEKSGAWFSYDSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLRE 325
E K FL +N + ++ +R+
Sbjct: 314 ENSKAFLRDNPDMTAKIEAAIRQ 336
>gi|154253020|ref|YP_001413844.1| recA protein [Parvibaculum lavamentivorans DS-1]
gi|189039601|sp|A7HWA4.1|RECA_PARL1 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|154156970|gb|ABS64187.1| recA protein [Parvibaculum lavamentivorans DS-1]
Length = 365
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 184/312 (58%), Positives = 237/312 (75%), Gaps = 3/312 (0%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVV 61
S K AL AL QI SFGKGSIM LG++ + VSTGS LDIALG GGLP+GR++
Sbjct: 13 SDKKKALDAALSQIERSFGKGSIMRLGKNEQIVEIESVSTGSLGLDIALGIGGLPRGRII 72
Query: 62 EIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCG 121
EIYGPE+SGKTTLAL +AEAQ+ GG C F+DAEHALDP A +GV+ ++LL++QPD G
Sbjct: 73 EIYGPESSGKTTLALQTVAEAQKSGGVCAFVDAEHALDPIYARKLGVQLDDLLISQPDTG 132
Query: 122 EQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSL 181
EQAL + DTL+RSG+VDV+V+DSVAAL PK EL+GEMGD+ +QARLMSQALRKL+ S+
Sbjct: 133 EQALEIADTLVRSGAVDVLVIDSVAALTPKAELEGEMGDSLPGLQARLMSQALRKLTGSI 192
Query: 182 SLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGS 241
S S T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K +E +G+
Sbjct: 193 SKSNTMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAIKDRDEVVGN 250
Query: 242 QIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-R 300
Q VK+VKNK+APPFK +F++ +G+GIS+ E++DL K K+G+ F+YN + +
Sbjct: 251 QTRVKVVKNKVAPPFKQVEFDIMYGEGISKMGELVDLGSKAGIVEKSGSWFSYNSQRIGQ 310
Query: 301 GKEAFKQFLVEN 312
G+E KQFL +N
Sbjct: 311 GRENAKQFLRDN 322
>gi|383389187|gb|AFH09571.1| recombinase A [Aeromonas popoffii]
gi|383389195|gb|AFH09575.1| recombinase A [Aeromonas popoffii]
gi|383389197|gb|AFH09576.1| recombinase A [Aeromonas popoffii]
gi|383389199|gb|AFH09577.1| recombinase A [Aeromonas popoffii]
Length = 353
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 190/346 (54%), Positives = 250/346 (72%), Gaps = 7/346 (2%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGSIM LG S T + +STGS +LD+ALG GGLP GR+VEI
Sbjct: 5 KQKALAAALGQIEKQFGKGSIMRLGDSKT-MDIEAISTGSLSLDVALGIGGLPCGRIVEI 63
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIAEAQ++G C FIDAEHALDP A +GV ++LL++QPD GEQ
Sbjct: 64 YGPESSGKTTLTLQVIAEAQKKGKVCAFIDAEHALDPIYAAKLGVNVDDLLISQPDTGEQ 123
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RS +VDV++VDSVAAL PK E++GEMGD+H+ +QARLMSQALRKL+ ++
Sbjct: 124 ALEICDMLVRSNAVDVIIVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKN 183
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
+ + IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+G+E +G++
Sbjct: 184 ANCLCIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAIKEGDEVVGNET 241
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK A+F++ +G GIS+E E++DL +KHK KAGA ++YN +GK
Sbjct: 242 RVKVVKNKVAPPFKQAEFQIFYGVGISKEGELVDLGVKHKLIDKAGAWYSYNGEKIGQGK 301
Query: 303 EAFKQFLVENESVREELVIKLREKLV---VDHKEPQTAVTDEDSTE 345
+ EN+++ E+ +LRE L+ ++P A DE E
Sbjct: 302 ANVMKLFSENKAMAAEIEARLRELLLSGDAPAEKPVVAEADELEAE 347
>gi|385787398|ref|YP_005818507.1| recombinase A [Erwinia sp. Ejp617]
gi|310766670|gb|ADP11620.1| Recombinase A [Erwinia sp. Ejp617]
Length = 355
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 190/327 (58%), Positives = 241/327 (73%), Gaps = 4/327 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG T V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRT-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A+ +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQRKGKTCAFIDAEHALDPVYAKKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV++VDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALARSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+G+E +GS+
Sbjct: 185 NSGTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAIKEGDEVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +KHK KAGA ++YN D+ +G
Sbjct: 243 TRVKVVKNKVAAPFKQAEFQIMYGEGINIYGELVDLGVKHKLIEKAGAWYSYNGDKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLV 328
K FL EN ++ E+ KLR L+
Sbjct: 303 KANAGNFLKENPAIANEIDAKLRAMLL 329
>gi|148653778|ref|YP_001280871.1| recombinase A [Psychrobacter sp. PRwf-1]
gi|172048565|sp|A5WGY0.1|RECA_PSYWF RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|148572862|gb|ABQ94921.1| recA protein [Psychrobacter sp. PRwf-1]
Length = 349
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 191/351 (54%), Positives = 250/351 (71%), Gaps = 14/351 (3%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL+ AL QI FGK +IM LG + V VVSTGS LDIALG GGLPKGR++EIYGP
Sbjct: 8 ALKAALGQIEKQFGKNTIMHLGDNSATLDVDVVSTGSLGLDIALGIGGLPKGRIIEIYGP 67
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTTL L IAE Q+QGG C FIDAEHALDP A +GV T++LL++QPD GEQAL
Sbjct: 68 ESSGKTTLTLQAIAECQKQGGTCAFIDAEHALDPIYARKLGVNTDDLLVSQPDNGEQALE 127
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ D L+RSG++D++V+DSVAAL P+ E++GEMGD+HM +QARLMSQALRK++ + S
Sbjct: 128 ITDMLVRSGALDMIVIDSVAALTPRAEIEGEMGDSHMGLQARLMSQALRKITGNAKRSNC 187
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK G+E IG+Q VK
Sbjct: 188 MVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAVKSGDEIIGNQTRVK 245
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGKEAF 305
++KNK+APPF+ A+FE+ +G+G + +E+IDL ++ KAGA ++Y D +GK
Sbjct: 246 VIKNKMAPPFRQAEFEITYGEGTNHLAEVIDLGVEIGVVGKAGAWYSYGDEKIGQGKANS 305
Query: 306 KQFLVENESVREELVIKLR-EKLVVDHKEPQTAVTDEDSTEETVSTISPDS 355
FL +N ++ EE+ K+R EKL V EP+ E V + P+S
Sbjct: 306 VLFLKDNPAIAEEIEAKIRAEKLAV---EPEKGA-------EAVDEVEPES 346
>gi|406945512|gb|EKD76979.1| hypothetical protein ACD_42C00513G0003 [uncultured bacterium]
Length = 349
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/346 (53%), Positives = 248/346 (71%), Gaps = 6/346 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FG+G+IM LG + + V+STGS LD+ALG GGLP+GRVVEI
Sbjct: 5 KSKALSAALSQIEKQFGRGAIMSLGDGQAEKDISVISTGSLGLDVALGIGGLPRGRVVEI 64
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L IAE Q+ GG F+DAEHALDP AE +GV + LL++QPD GEQ
Sbjct: 65 YGPESSGKTTLTLQTIAECQKAGGTAAFVDAEHALDPIYAEKLGVDIKKLLVSQPDTGEQ 124
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RSG+VD+VV+DSVAAL P+ E++G+MGD+HM +QARLMSQALRKL+ ++
Sbjct: 125 ALEITDMLVRSGAVDMVVIDSVAALTPRAEIEGDMGDSHMGLQARLMSQALRKLTANIKK 184
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T+++FINQ+R K+ FG P E T GGNALKFYASVRL+I+R G +KKGEE +G++
Sbjct: 185 SNTLVVFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRTGAIKKGEEILGNET 242
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPF+ FE+ +G+GIS E E+I+L + K+GA ++Y + +GK
Sbjct: 243 RVKVVKNKVAPPFRQVDFEILYGEGISHEGELIELGVAQGLIDKSGAWYSYQGKRIGQGK 302
Query: 303 EAFKQFLVENESVREELVIKLREKLVVDHKEPQTA---VTDEDSTE 345
+ + +L EN+S+ EEL KLR+ L+ P A + DE+ E
Sbjct: 303 DNVRDYLKENKSIAEELDKKLRDILLSGKAVPIVAKIKIEDEELVE 348
>gi|222151124|ref|YP_002560278.1| recombinase A [Macrococcus caseolyticus JCSC5402]
gi|254790437|sp|B9EBH1.1|RECA_MACCJ RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|222120247|dbj|BAH17582.1| recombinase RecA [Macrococcus caseolyticus JCSC5402]
Length = 353
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/330 (56%), Positives = 245/330 (74%), Gaps = 4/330 (1%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
MS++ AL + + SFGKG++M LG T R+V VS+GS LD ALG GG PKGR+
Sbjct: 1 MSERQKALDTVIKNMEKSFGKGAVMKLGDR-TDRNVSTVSSGSITLDSALGVGGYPKGRI 59
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+EIYGPE+SGKTT+ALH IAE QRQGG FIDAEHALDP A+ +GV ENL L+QPD
Sbjct: 60 IEIYGPESSGKTTVALHAIAEVQRQGGVAAFIDAEHALDPVYAKNLGVDIENLYLSQPDH 119
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQ L + + +RSG+VD++VVDSVAAL PK E++GEMGD+HM +QARLMSQALRKLS S
Sbjct: 120 GEQGLEIAEAFVRSGAVDIIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKLSGS 179
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
+S S TI IFINQVR K+ FG P E T GG ALKFY+SVRL ++R +K+G+E +G
Sbjct: 180 VSKSNTIAIFINQVREKIGVM-FGNP-ETTPGGRALKFYSSVRLEVRRAEQLKQGQEIVG 237
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNF 299
++ +K+VKNK+APPFK A+ ++ +GKGISRE EI+DL +++ K+GA ++Y+ +R
Sbjct: 238 NRTKIKVVKNKVAPPFKVAEVDIMYGKGISREGEIVDLGAEYEVLQKSGAWYSYDGERIG 297
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVV 329
+G+E K +L EN VR+E+ K+R+ + V
Sbjct: 298 QGRENIKTYLKENPEVRDEIDQKIRKAMGV 327
>gi|392951170|ref|ZP_10316725.1| RecA protein [Hydrocarboniphaga effusa AP103]
gi|391860132|gb|EIT70660.1| RecA protein [Hydrocarboniphaga effusa AP103]
Length = 338
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/332 (56%), Positives = 245/332 (73%), Gaps = 2/332 (0%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL+ AL QI FGKG+IM +G + P + V+STGS LD ALG GG+P+GRVVEIYGP
Sbjct: 8 ALEAALGQIDKQFGKGTIMRMGANERP-EIEVISTGSITLDAALGIGGVPRGRVVEIYGP 66
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTT ALHV A+AQ+ GG C +IDAEHALD + AE +GV+ +LL++QPD GEQAL
Sbjct: 67 ESSGKTTFALHVTAQAQKIGGTCAYIDAEHALDVTYAERLGVQVGDLLISQPDTGEQALE 126
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ D L+RS +VDV+V+DSVAALVPK E++GEMGDA + +QARLMSQALRKL+ S++ S+T
Sbjct: 127 IADMLVRSNAVDVIVIDSVAALVPKSEIEGEMGDAAVGVQARLMSQALRKLTGSINRSKT 186
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
++IFINQ+R K+ G E T GGNALKFYAS+RL+I+RIG +KKG+E +G++ VK
Sbjct: 187 LIIFINQLRMKIGVMMPGQSPETTTGGNALKFYASMRLDIRRIGAIKKGDEVVGNETRVK 246
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGKEAF 305
+VKNKLAPPFK FE+ +G+GISRE E+IDL ++HK K+GA + Y +GK+
Sbjct: 247 VVKNKLAPPFKQVVFEIMYGEGISREGELIDLGVEHKLVEKSGAWYAYKGEKIGQGKDNA 306
Query: 306 KQFLVENESVREELVIKLREKLVVDHKEPQTA 337
K +L E+ E+ LR KL+ +E A
Sbjct: 307 KGYLREHPEAAAEIEATLRAKLLPGKREKAEA 338
>gi|88858311|ref|ZP_01132953.1| RecA protein (Recombinase A) [Pseudoalteromonas tunicata D2]
gi|88819928|gb|EAR29741.1| RecA protein (Recombinase A) [Pseudoalteromonas tunicata D2]
Length = 353
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/327 (57%), Positives = 248/327 (75%), Gaps = 4/327 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K+ AL AL QI FGKGSIM LG S + +STGS +DIALG GGLP GR+VEI
Sbjct: 5 KEKALSAALSQIERQFGKGSIMKLGDS-QALDIESISTGSLGIDIALGIGGLPAGRIVEI 63
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
+GPE+SGKTTL L VIAEAQ++G C FIDAEHALDP AE +GV ++LL++QPD GEQ
Sbjct: 64 FGPESSGKTTLTLQVIAEAQKKGKTCAFIDAEHALDPVYAEKLGVNIKDLLVSQPDTGEQ 123
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RSG+VDVV++DSVAAL PK E++G+MGD H+ +QARLMSQALRKL+ ++
Sbjct: 124 ALEICDMLVRSGAVDVVIIDSVAALTPKAEIEGDMGDHHVGLQARLMSQALRKLTGNIKR 183
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ FG P E T GGNALKFYASVR++I+R G VK+G+E +G++
Sbjct: 184 SNTLVIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRIDIRRTGSVKEGDEVVGNET 241
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGK 302
VKIVKNK+APPFK A+F + +G+GIS+ E+IDL ++HKF KAGA ++Y ++ +GK
Sbjct: 242 RVKIVKNKVAPPFKQAEFIIMYGEGISKHGELIDLGVQHKFVEKAGAWYSYQGNKVGQGK 301
Query: 303 EAFKQFLVENESVREELVIKLREKLVV 329
+FL EN ++ +E+ KLR+ L++
Sbjct: 302 SNSIKFLKENPAIADEIEKKLRDMLLL 328
>gi|453382664|dbj|GAC82959.1| protein RecA [Gordonia paraffinivorans NBRC 108238]
Length = 347
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/325 (56%), Positives = 248/325 (76%), Gaps = 4/325 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
++ AL AL QI SFGKGS+M LG T + + ++ TGS ALD+ALG GGLP+GRVVEI
Sbjct: 8 REKALDLALAQIDKSFGKGSVMRLGEE-TRQPIEIIPTGSIALDVALGIGGLPRGRVVEI 66
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ALH +A AQ QGG FIDAEHALDP A +GV T+ LL++QPD GEQ
Sbjct: 67 YGPESSGKTTVALHAVANAQAQGGIAAFIDAEHALDPDYAAKLGVDTDALLVSQPDTGEQ 126
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D LIRSG++D++VVDSVAALVPK E++GEMGD+H+ +QARLMSQALRK++ +L+
Sbjct: 127 ALEIADMLIRSGALDILVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKMTSALNQ 186
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+T IFINQ+R K+ FG P E T GG ALKFY+SVRL+++RI +K G E +G++
Sbjct: 187 SKTTAIFINQLREKIGVM-FGSP-ETTTGGKALKFYSSVRLDVRRIETLKDGTEAVGNRT 244
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRGK 302
VK+VKNK+APPFK A+F++ +G GIS+E +ID+ + F K+G+ FTY D+ +GK
Sbjct: 245 RVKVVKNKVAPPFKQAEFDILYGHGISKEGSLIDMGVAEGFIRKSGSWFTYEGDQLGQGK 304
Query: 303 EAFKQFLVENESVREELVIKLREKL 327
E ++FL+EN +R+E+ K++EKL
Sbjct: 305 ENARKFLIENTDIRDEIEKKIKEKL 329
>gi|297584104|ref|YP_003699884.1| recA protein [Bacillus selenitireducens MLS10]
gi|297142561|gb|ADH99318.1| recA protein [Bacillus selenitireducens MLS10]
Length = 352
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/326 (57%), Positives = 243/326 (74%), Gaps = 4/326 (1%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
MS + AL AL QI FGKGSIM LG R V +S+G ALDIALG GG P+GRV
Sbjct: 1 MSDRKQALDMALKQIEKQFGKGSIMKLGEQAEQR-VSTISSGVLALDIALGVGGYPRGRV 59
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+E+YGPE+SGKTT+ALH IAE QR GG FIDAEHALDP A+ +GV +NLLL+QPD
Sbjct: 60 IEVYGPESSGKTTVALHAIAEVQRNGGTAAFIDAEHALDPKYAQALGVDIDNLLLSQPDT 119
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + + L+RSG+VD++VVDSVAALVPK E++GEMGD+H+ +QARLMSQALRKLS +
Sbjct: 120 GEQALEIAEALVRSGAVDMIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLSGA 179
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
+S S+TI +FINQ+R K+ FG P E T GG ALKFY+SVRL ++R +K+G + IG
Sbjct: 180 VSKSKTIAMFINQIREKVGVM-FGNP-ETTPGGRALKFYSSVRLEVRRAETLKQGNDMIG 237
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNF 299
++ +K+VKNK+APPFKTA+ ++ +G+GISRE I+D+A K+GA ++Y+ DR
Sbjct: 238 NKTKLKVVKNKVAPPFKTAEVDIMYGEGISREGSILDIASDLDIVQKSGAWYSYDGDRMG 297
Query: 300 RGKEAFKQFLVENESVREELVIKLRE 325
+G+E KQFL EN+ V E+ K+RE
Sbjct: 298 QGRENAKQFLKENDEVSSEIDRKIRE 323
>gi|423201330|ref|ZP_17187910.1| protein recA [Aeromonas veronii AER39]
gi|404617016|gb|EKB13953.1| protein recA [Aeromonas veronii AER39]
Length = 354
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 190/349 (54%), Positives = 249/349 (71%), Gaps = 9/349 (2%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGSIM LG S T + +STGS +LD+ALG GGLP GR+VEI
Sbjct: 5 KQKALAAALGQIEKQFGKGSIMRLGDSKT-MDIEAISTGSLSLDVALGIGGLPCGRIVEI 63
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIAEAQ++G C F+DAEHALDP A +GV ++LL++QPD GEQ
Sbjct: 64 YGPESSGKTTLTLQVIAEAQKKGKTCAFVDAEHALDPIYAAKLGVNVDDLLISQPDTGEQ 123
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RS +VDV++VDSVAAL PK E++GEMGD+H+ +QARLMSQALRKL+ ++
Sbjct: 124 ALEICDMLVRSNAVDVIIVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKN 183
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
+ + IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+G+E +G++
Sbjct: 184 ANCLCIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAIKEGDEVVGNET 241
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK A+F++ +G GIS+E E++DL +KHK KAGA ++YN +GK
Sbjct: 242 RVKVVKNKVAPPFKQAEFQIFYGAGISKEGELVDLGVKHKLIDKAGAWYSYNGEKIGQGK 301
Query: 303 EAFKQFLVENESVREELVIKLREKLV-----VDHKEPQTAVTDEDSTEE 346
+ EN+ + E+ +LRE L+ VD K D D+ E
Sbjct: 302 ANVMKLFAENKVMAGEVEARLRELLLSGAVPVDDKAAPVEADDFDAESE 350
>gi|334703003|ref|ZP_08518869.1| recombinase A [Aeromonas caviae Ae398]
Length = 354
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 184/326 (56%), Positives = 243/326 (74%), Gaps = 4/326 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGSIM LG S T + +STGS +LD+ALG GGLP GR+VEI
Sbjct: 5 KQKALAAALGQIEKQFGKGSIMRLGDSKT-MDIEAISTGSLSLDVALGIGGLPCGRIVEI 63
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIAEAQ++G C F+DAEHALDP A +GV ++LL++QPD GEQ
Sbjct: 64 YGPESSGKTTLTLQVIAEAQKKGKTCAFVDAEHALDPIYAAKLGVNVDDLLISQPDTGEQ 123
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RS +VDV++VDSVAAL PK E++GEMGD+H+ +QARLMSQALRKL+ ++
Sbjct: 124 ALEICDMLVRSNAVDVIIVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKN 183
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
+ + IFINQ+R K+ FG P E T GGNALKFYASVRL+I+R G +K+G+E +G++
Sbjct: 184 ANCLCIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRTGAIKEGDEVVGNET 241
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK A+F++ +G GIS+E E++DL +KHK KAGA ++YN +GK
Sbjct: 242 RVKVVKNKVAPPFKQAEFQIFYGAGISKEGELVDLGVKHKLIDKAGAWYSYNGEKIGQGK 301
Query: 303 EAFKQFLVENESVREELVIKLREKLV 328
+ EN+++ E+ +KLRE L+
Sbjct: 302 ANVMKLFSENKALAAEVEVKLRELLL 327
>gi|359453453|ref|ZP_09242768.1| recombination protein RecA [Pseudoalteromonas sp. BSi20495]
gi|414069766|ref|ZP_11405757.1| recombination protein RecA [Pseudoalteromonas sp. Bsw20308]
gi|358049467|dbj|GAA79017.1| recombination protein RecA [Pseudoalteromonas sp. BSi20495]
gi|410807729|gb|EKS13704.1| recombination protein RecA [Pseudoalteromonas sp. Bsw20308]
Length = 347
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/327 (57%), Positives = 246/327 (75%), Gaps = 4/327 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGSIM LG + ++ VSTGS +DIALG GGLP GR+VE+
Sbjct: 5 KQKALDAALSQIERQFGKGSIMKLGDN-KALNIESVSTGSLGIDIALGIGGLPMGRIVEV 63
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIAEAQ++G C FIDAEHALDP A+ +GV ++L ++QPD GEQ
Sbjct: 64 YGPESSGKTTLTLQVIAEAQKEGKTCAFIDAEHALDPIYAQKLGVNIDDLFVSQPDTGEQ 123
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RS +VDVV++DSVAAL PK E++G+MGD+HM +QARLMSQALRKL+ ++
Sbjct: 124 ALEICDMLVRSSAVDVVIIDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTGNIKR 183
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T+ IFINQ+R K+ FG P E T GGNALKFYASVR++I+RIG VK+G+E +G++
Sbjct: 184 SNTLCIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRIDIRRIGSVKEGDEVVGNET 241
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRGK 302
VKIVKNK+APPFK A+F + +G+GIS++ E+IDL +KHK KAGA ++Y ++ +GK
Sbjct: 242 RVKIVKNKVAPPFKQAEFIIMYGEGISKQGELIDLGVKHKIVEKAGAWYSYCGNKVGQGK 301
Query: 303 EAFKQFLVENESVREELVIKLREKLVV 329
+FL EN + +E+ KLRE L++
Sbjct: 302 SNSIKFLKENPEIADEIEGKLREMLLL 328
>gi|397737253|ref|ZP_10503926.1| protein RecA [Rhodococcus sp. JVH1]
gi|396926983|gb|EJI94219.1| protein RecA [Rhodococcus sp. JVH1]
Length = 351
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 188/339 (55%), Positives = 255/339 (75%), Gaps = 6/339 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
+D AL AL QI +FGKGS+M LG V + + V+ TGS ALD+ALG GGLP+GRVVEI
Sbjct: 12 RDKALDLALAQIDKNFGKGSVMRLGEGVR-QPIAVIPTGSIALDVALGIGGLPRGRVVEI 70
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ALH +A AQ GG FIDAEHALDP A+ +GV T+ LL++QPD GEQ
Sbjct: 71 YGPESSGKTTVALHAVANAQAAGGIAAFIDAEHALDPDYAQKLGVDTDALLVSQPDTGEQ 130
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D LIRSG++D++VVDSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ +LS
Sbjct: 131 ALEIADMLIRSGALDILVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTGALSN 190
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T IFINQ+R K+ FG P E T GG ALKFY+SVRL+++RI +K G + +G++
Sbjct: 191 SGTTAIFINQLREKIGVM-FGSP-ETTTGGKALKFYSSVRLDVRRIETLKDGTDAVGNRT 248
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRGK 302
VK+VKNK+APPFK A+F++ +G GIS+E +ID+ ++H F K+G+ +TY D+ +GK
Sbjct: 249 RVKVVKNKVAPPFKQAEFDILYGLGISKEGSLIDMGVEHGFIRKSGSWYTYEGDQLGQGK 308
Query: 303 EAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDE 341
E ++FL+EN +R+E+ K++EKL + TA TD+
Sbjct: 309 ENARKFLLENTDIRDEIEKKIKEKLGIGAD--VTAATDD 345
>gi|383389191|gb|AFH09573.1| recombinase A [Aeromonas popoffii]
Length = 353
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 190/346 (54%), Positives = 250/346 (72%), Gaps = 7/346 (2%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGSIM LG S T + +STGS +LD+ALG GGLP GR+VEI
Sbjct: 5 KQKALAAALGQIEKQFGKGSIMRLGDSKT-MDIEAISTGSLSLDVALGIGGLPCGRIVEI 63
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIAEAQ++G C FIDAEHALDP A +GV ++LL++QPD GEQ
Sbjct: 64 YGPESSGKTTLTLQVIAEAQKKGKVCAFIDAEHALDPIYAAKLGVNVDDLLISQPDTGEQ 123
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RS +VDV++VDSVAAL PK E++GEMGD+H+ +QARLMSQALRKL+ ++
Sbjct: 124 ALEICDMLVRSNAVDVIIVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKN 183
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
+ + IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+G+E +G++
Sbjct: 184 ANCLCIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAIKEGDEVVGNET 241
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK A+F++ +G GIS+E E++DL +KHK KAGA ++YN +GK
Sbjct: 242 RVKVVKNKVAPPFKQAEFQIFYGVGISKEGELVDLGVKHKLIDKAGAWYSYNGEKIGQGK 301
Query: 303 EAFKQFLVENESVREELVIKLREKLV---VDHKEPQTAVTDEDSTE 345
+ EN+++ E+ +LRE L+ ++P A DE E
Sbjct: 302 ANVMKLFSENKAMAAEVEARLRELLLSGDAPAEKPVVAEADELEAE 347
>gi|261820429|ref|YP_003258535.1| recombinase A [Pectobacterium wasabiae WPP163]
gi|261604442|gb|ACX86928.1| recA protein [Pectobacterium wasabiae WPP163]
gi|385870604|gb|AFI89124.1| Protein recA [Pectobacterium sp. SCC3193]
Length = 357
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/331 (58%), Positives = 242/331 (73%), Gaps = 6/331 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A+ +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV++VDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+R G +K GEE +GS+
Sbjct: 185 QANTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRTGAIKDGEEVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +KHK KAGA ++YN D+ +G
Sbjct: 243 TRVKVVKNKVAAPFKQAEFQILYGEGINIHGELVDLGVKHKLIEKAGAWYSYNGDKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHK 332
K FL EN ++ EL KLRE L+ HK
Sbjct: 303 KANACNFLKENSAIAAELDKKLREMLL--HK 331
>gi|407791037|ref|ZP_11138126.1| recombinase A [Gallaecimonas xiamenensis 3-C-1]
gi|407201680|gb|EKE71677.1| recombinase A [Gallaecimonas xiamenensis 3-C-1]
Length = 348
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 188/327 (57%), Positives = 244/327 (74%), Gaps = 4/327 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGSIM +G S + VSTGS LDIALG GGLP GR+VEI
Sbjct: 5 KQKALAAALGQIERQFGKGSIMRMGDSQV-LSIDSVSTGSLGLDIALGIGGLPFGRIVEI 63
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
+GPE+SGKTTL L VIAEAQ+QG C FIDAEHALDP A +GV ++LL++QPD GEQ
Sbjct: 64 FGPESSGKTTLTLQVIAEAQKQGKTCAFIDAEHALDPIYARKLGVNVDDLLVSQPDTGEQ 123
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RS +VDVV+VDSVAAL PK E++GEMGD+H+ +QARLMSQALRKL+ ++
Sbjct: 124 ALEICDMLVRSSAVDVVIVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKK 183
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T+ +FINQ+R K+ FG P E T GGNALKFYASVRL+I+R G VK+G+E +G++
Sbjct: 184 SNTLCVFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGNET 241
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGK 302
VK+VKNK+APPFK A+F++ +G G S+E+E+IDL + K KAGA ++Y D+ +GK
Sbjct: 242 RVKVVKNKVAPPFKQAEFQIMYGAGTSKEAELIDLGVAQKLVDKAGAWYSYKGDKIGQGK 301
Query: 303 EAFKQFLVENESVREELVIKLREKLVV 329
+FL+EN+ + E+ +LRE+L+V
Sbjct: 302 ANAVKFLLENKDIAHEIESQLRERLLV 328
>gi|384196826|ref|YP_005582570.1| recombinase A [Bifidobacterium breve ACS-071-V-Sch8b]
gi|333110211|gb|AEF27227.1| RecA protein [Bifidobacterium breve ACS-071-V-Sch8b]
Length = 394
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 184/323 (56%), Positives = 250/323 (77%), Gaps = 4/323 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K+ AL AL Q+ SFGKGS M LG ++V V+ TGS ALD+ALG GGLPKGR+VE
Sbjct: 22 KRKAALDTALAQVEKSFGKGSAMRLGDQPV-QNVEVIPTGSLALDMALGIGGLPKGRIVE 80
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTLALHV+A AQ++GG +IDAEHALDP+ A +GV T++L+++QPD GE
Sbjct: 81 IYGPESSGKTTLALHVVANAQKKGGVAAYIDAEHALDPAYARKLGVDTDSLIVSQPDNGE 140
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D LIRSG++DV+V+DSVAALVPK E++GEMGD+H+ +QARLMSQALRK++ +L+
Sbjct: 141 QALEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKMTGALA 200
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ T IFINQ+R K+ F FG P E T GG ALKFYASVRL+I+RI +K G+E +G++
Sbjct: 201 QAGTTAIFINQLREKIGVF-FGNP-ETTTGGKALKFYASVRLDIRRIQTLKNGDEAVGNR 258
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRG 301
VK+VKNK+APPFK+A+F++ +G+GISRE +ID+A + K+G+ FTY D+ +G
Sbjct: 259 TRVKVVKNKMAPPFKSAEFDMLYGEGISREGSVIDMAQQVGVVKKSGSWFTYEGDQLGQG 318
Query: 302 KEAFKQFLVENESVREELVIKLR 324
+E +QFL +N ++ EE+ K++
Sbjct: 319 REKVRQFLKDNPAITEEIENKVK 341
>gi|401675026|ref|ZP_10807020.1| recombinase A [Enterobacter sp. SST3]
gi|400217483|gb|EJO48375.1| recombinase A [Enterobacter sp. SST3]
Length = 352
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 195/345 (56%), Positives = 245/345 (71%), Gaps = 4/345 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGSIM LG T V +STGS +LDIALG GGLP GR+VEI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRLGEDRT-MDVETISTGSLSLDIALGAGGLPMGRIVEI 65
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A +GV +NLL +QPD GEQ
Sbjct: 66 YGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGEQ 125
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L RSG+VDV+VVDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 126 ALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLKQ 185
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+GE +GS+
Sbjct: 186 SNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKEGENVVGSET 243
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGK 302
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +K K KAGA ++YN D+ +GK
Sbjct: 244 RVKVVKNKIAAPFKQAEFQILYGEGINFYGELVDLGVKEKLIEKAGAWYSYNGDKIGQGK 303
Query: 303 EAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEET 347
+L EN + +E+ K+RE L+ + V D EET
Sbjct: 304 ANAISWLKENPAAAKEIEKKVRELLLNNQDSKPDFVVDAADAEET 348
>gi|392308033|ref|ZP_10270567.1| recombinase A [Pseudoalteromonas citrea NCIMB 1889]
Length = 349
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 191/347 (55%), Positives = 249/347 (71%), Gaps = 9/347 (2%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGSIM LG S + +STGS +DIALG GGLP GR+VEI
Sbjct: 5 KQKALDAALSQIERQFGKGSIMKLGDS-QALDIEAISTGSLGIDIALGIGGLPTGRIVEI 63
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIAEAQ++G C F+DAEHALDP AE +GV ++LL++QPD GEQ
Sbjct: 64 YGPESSGKTTLTLQVIAEAQKKGKTCAFVDAEHALDPVYAEKLGVNVDDLLVSQPDTGEQ 123
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RSG+VDVV+VDSVAAL PK E++G+MGD H+ +QARLMSQALRKL+ ++
Sbjct: 124 ALEICDMLVRSGAVDVVIVDSVAALTPKAEIEGDMGDHHVGLQARLMSQALRKLTGNIKR 183
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T+ IFINQ+R K+ FG P E T GGNALKFY+SVR++I+RIG VK G+E +G++
Sbjct: 184 SNTLCIFINQIRMKIGVM-FGNP-ETTTGGNALKFYSSVRIDIRRIGSVKDGDEVVGNET 241
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VKIVKNK+APPFK A+F + +G+GIS+ E+IDL +KHK KAGA ++Y +GK
Sbjct: 242 RVKIVKNKVAPPFKQAEFIIMYGQGISKHGELIDLGVKHKLVEKAGAWYSYKGSKVGQGK 301
Query: 303 EAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETVS 349
+FL EN + E+ +LRE L++ Q + ED ++ ++
Sbjct: 302 SNSIKFLKENPEIANEIEGQLREMLLL-----QATIKPEDGEDQGLA 343
>gi|154488807|ref|ZP_02029656.1| hypothetical protein BIFADO_02115 [Bifidobacterium adolescentis
L2-32]
gi|154082944|gb|EDN81989.1| RecA protein [Bifidobacterium adolescentis L2-32]
Length = 380
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 183/323 (56%), Positives = 247/323 (76%), Gaps = 4/323 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
++ AL AL Q+ SFGKGS M LG + V V+ TGS ALD+ALG GGLPKGR+VE
Sbjct: 22 RRQAALDTALAQVEKSFGKGSAMRLGDR-PEQDVEVIPTGSLALDMALGIGGLPKGRIVE 80
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTLALHV+A AQ+ GG FIDAEHALDP A +GV T++L+++QPD GE
Sbjct: 81 IYGPESSGKTTLALHVVANAQKAGGVAAFIDAEHALDPVYARKLGVDTDSLIVSQPDNGE 140
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D LIRSG++DV+V+DSVAALVPK E++GEMGD+H+ +QARLMSQALRK++ +L+
Sbjct: 141 QALEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKMTGALA 200
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ T IFINQ+R K+ F FG P E T GG ALKFYASVR++I+RI +K G+E +G++
Sbjct: 201 QAGTTAIFINQLREKIGVF-FGNP-ETTTGGKALKFYASVRMDIRRIQTIKNGDEAVGNR 258
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRG 301
VK+VKNK+APPFKTA+F++ +G+GIS+E ++D+AL+ K+G+ FTY D+ +G
Sbjct: 259 TKVKVVKNKMAPPFKTAEFDVLYGEGISKEGSVLDMALQANVVKKSGSWFTYEGDQLGQG 318
Query: 302 KEAFKQFLVENESVREELVIKLR 324
+E +QFL +N + EE+ K++
Sbjct: 319 RENVRQFLKDNPELTEEIENKVK 341
>gi|339479391|gb|ABE95859.1| RecA protein [Bifidobacterium breve UCC2003]
Length = 392
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 184/323 (56%), Positives = 250/323 (77%), Gaps = 4/323 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K+ AL AL Q+ SFGKGS M LG ++V V+ TGS ALD+ALG GGLPKGR+VE
Sbjct: 22 KRKAALDTALAQVEKSFGKGSAMRLGDQPV-QNVEVIPTGSLALDMALGIGGLPKGRIVE 80
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTLALHV+A AQ++GG +IDAEHALDP+ A +GV T++L+++QPD GE
Sbjct: 81 IYGPESSGKTTLALHVVANAQKKGGVAAYIDAEHALDPAYARKLGVDTDSLIVSQPDNGE 140
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D LIRSG++DV+V+DSVAALVPK E++GEMGD+H+ +QARLMSQALRK++ +L+
Sbjct: 141 QALEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKMTGALA 200
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ T IFINQ+R K+ F FG P E T GG ALKFYASVRL+I+RI +K G+E +G++
Sbjct: 201 QAGTTAIFINQLREKIGVF-FGNP-ETTTGGKALKFYASVRLDIRRIQTLKNGDEAVGNR 258
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRG 301
VK+VKNK+APPFK+A+F++ +G+GISRE +ID+A + K+G+ FTY D+ +G
Sbjct: 259 TRVKVVKNKMAPPFKSAEFDMLYGEGISREGSVIDMAQQVGVVKKSGSWFTYEGDQLGQG 318
Query: 302 KEAFKQFLVENESVREELVIKLR 324
+E +QFL +N ++ EE+ K++
Sbjct: 319 REKVRQFLKDNPAITEEIENKVK 341
>gi|115523612|ref|YP_780523.1| recombinase A [Rhodopseudomonas palustris BisA53]
gi|115517559|gb|ABJ05543.1| RecA protein [Rhodopseudomonas palustris BisA53]
Length = 362
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/324 (57%), Positives = 241/324 (74%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGS+M LG++ V +STGS LDIALG GGLPKGRVVEI
Sbjct: 16 KSKALAAALSQIERQFGKGSVMRLGKNDRSMDVETISTGSLGLDIALGVGGLPKGRVVEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH AEAQ++GG C FIDAEHALDP A +GV + LL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALHCAAEAQKKGGICAFIDAEHALDPIYARKLGVNVDELLISQPDHGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV++VDSVAALVP+ EL+GEMGDA +QARLMSQALRKL+ S++
Sbjct: 136 ALEIADTLVRSGAVDVLIVDSVAALVPRAELEGEMGDALPGLQARLMSQALRKLTASINK 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ +G P E T GGNALKFYASVRL+I+RIG +K+ +E +G+Q
Sbjct: 196 SNTMVIFINQIRMKIGVM-YGSP-ETTTGGNALKFYASVRLDIRRIGQIKERDEVVGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G+G+S+ EI+DL +K K+GA F+Y+ + +G+
Sbjct: 254 RVKVVKNKLAPPFKQVEFDIMYGEGVSKMGEILDLGVKAGIVDKSGAWFSYDSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E K FL N + ++ +R+
Sbjct: 314 ENSKTFLKGNPDITAKIEAAIRQN 337
>gi|11387040|sp|Q9S660.1|RECA_BIFBR RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|4416209|gb|AAD20261.1| RecA protein [Bifidobacterium breve]
Length = 392
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 184/323 (56%), Positives = 250/323 (77%), Gaps = 4/323 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K+ AL AL Q+ SFGKGS M LG ++V V+ TGS ALD+ALG GGLPKGR+VE
Sbjct: 22 KRKAALDTALAQVEKSFGKGSAMRLGDQPV-QNVEVIPTGSLALDMALGIGGLPKGRIVE 80
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTLALHV+A AQ++GG +IDAEHALDP+ A +GV T++L+++QPD GE
Sbjct: 81 IYGPESSGKTTLALHVVANAQKKGGVAAYIDAEHALDPAYARKLGVDTDSLIVSQPDNGE 140
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D LIRSG++DV+V+DSVAALVPK E++GEMGD+H+ +QARLMSQALRK++ +L+
Sbjct: 141 QALEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKMTGALA 200
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ T IFINQ+R K+ F FG P E T GG ALKFYASVRL+I+RI +K G+E +G++
Sbjct: 201 QAGTTAIFINQLREKIGVF-FGNP-ETTTGGKALKFYASVRLDIRRIQTLKNGDEAVGNR 258
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRG 301
VK+VKNK+APPFK+A+F++ +G+GISRE +ID+A + K+G+ FTY D+ +G
Sbjct: 259 TRVKVVKNKMAPPFKSAEFDMLYGEGISREGSVIDMAQQVGVVKKSGSWFTYEGDQLGQG 318
Query: 302 KEAFKQFLVENESVREELVIKLR 324
+E +QFL +N ++ EE+ K++
Sbjct: 319 REKVRQFLKDNPAITEEIENKVK 341
>gi|160892548|ref|ZP_02073338.1| hypothetical protein CLOL250_00077 [Clostridium sp. L2-50]
gi|156865589|gb|EDO59020.1| RecA protein [Clostridium sp. L2-50]
Length = 344
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 177/315 (56%), Positives = 245/315 (77%), Gaps = 3/315 (0%)
Query: 14 QITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASGKTT 73
QI +GKGS+M LG S ++ V+ TGS +LDIALG GG+P+GR++E++GPE+SGKTT
Sbjct: 17 QIEKQYGKGSVMKLGDSSANMNIEVIPTGSLSLDIALGLGGVPRGRIIEVFGPESSGKTT 76
Query: 74 LALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSLVDTLIR 133
+ALH++AE Q++GG FIDAEHALDP A+ IGV ++L ++QPDCGEQAL + +T++R
Sbjct: 77 VALHIVAEIQKRGGIAGFIDAEHALDPVYAKNIGVNIDDLYISQPDCGEQALEITETMVR 136
Query: 134 SGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFINQ 193
SG+VDV++VDSVAALVPK E+DGEMGD+HM + ARLMSQALRKL+ +S + ++IFINQ
Sbjct: 137 SGAVDVIIVDSVAALVPKAEIDGEMGDSHMGLHARLMSQALRKLTAVVSKTNCVVIFINQ 196
Query: 194 VRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVKIVKNKLA 253
+R K+ FG P EVT GG ALKFYASVR++++RI +K G E +G++ VK+VKNK+A
Sbjct: 197 LREKVGVV-FGNP-EVTTGGRALKFYASVRMDVRRIDTLKMGGEIVGNRTRVKVVKNKVA 254
Query: 254 PPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRGKEAFKQFLVEN 312
PPFK A+F++ FGKGISRE +I+DLA+ + K+GA + Y D+ +G+E K FL EN
Sbjct: 255 PPFKEAEFDIMFGKGISREGDILDLAVANDIVDKSGAWYAYMGDKIGQGRENAKAFLAEN 314
Query: 313 ESVREELVIKLREKL 327
+++ +E+ K+REKL
Sbjct: 315 QAICDEIDEKIREKL 329
>gi|71062458|gb|AAZ21461.1| recA protein [Candidatus Pelagibacter ubique HTCC1062]
Length = 358
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/358 (52%), Positives = 254/358 (70%), Gaps = 13/358 (3%)
Query: 8 LQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPE 67
+ A+ QI +FGKGS+M LG+ V +STGS +LD+ALG GGLPKGRV+E+YGPE
Sbjct: 1 MDAAMSQIIDNFGKGSVMKLGQR-RAMDVESISTGSLSLDVALGIGGLPKGRVIEVYGPE 59
Query: 68 ASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSL 127
+SGKTTLAL V+AEAQ+ GG C FIDAEHALDP A+ +GV TE LL++QPD GEQAL +
Sbjct: 60 SSGKTTLALQVLAEAQKAGGICAFIDAEHALDPIYAKKLGVDTEELLISQPDTGEQALEI 119
Query: 128 VDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTI 187
DTL++SGS+ V+V+DSVAAL P+ E++GEMGD H+ +Q+RLMSQALRKL+ S+S + T+
Sbjct: 120 ADTLVKSGSISVIVIDSVAALTPRAEIEGEMGDHHVGLQSRLMSQALRKLTGSISSTNTM 179
Query: 188 LIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVKI 247
+IFINQ+R K+ FG P E T GGNALKFY+SVR++I+RIG +K G+E IG+ VK+
Sbjct: 180 MIFINQIRMKIGVM-FGSP-ETTSGGNALKFYSSVRMDIRRIGAIKNGDEIIGNSTRVKV 237
Query: 248 VKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGKEAFK 306
VKNK+APPFK +F+L +GKGIS+ E++DL K KAGA + Y +G+E K
Sbjct: 238 VKNKVAPPFKVVEFDLMYGKGISKVGELVDLGSKADIVEKAGAWYAYKGEKIGQGRENAK 297
Query: 307 QFLVENESVREELVIKLREKLVVDHK-------EPQTAVTD--EDSTEETVSTISPDS 355
+L +N + E+ + +REK V K +P+ A D E+ ET ++P S
Sbjct: 298 TYLEQNPKIAAEIEMAIREKAGVIAKKIEGNPLDPEKAAKDQIEEPKLETKEEVTPPS 355
>gi|146341855|ref|YP_001206903.1| recombinase A [Bradyrhizobium sp. ORS 278]
gi|146194661|emb|CAL78686.1| Recombinase A (recA) [Bradyrhizobium sp. ORS 278]
Length = 362
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/345 (55%), Positives = 247/345 (71%), Gaps = 5/345 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGS+M LG++ V VSTGS LDIALG GGLPKGR+VEI
Sbjct: 16 KSKALSAALSQIERQFGKGSVMKLGKNDRSMDVETVSTGSLGLDIALGIGGLPKGRIVEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH +AEAQ++GG C FIDAEHALDP A +GV + LL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+VVDSVAALVPK EL+GEMG++ +QARLMSQALRKL+ S++
Sbjct: 136 ALEICDTLVRSGAVDVLVVDSVAALVPKAELEGEMGESLPGLQARLMSQALRKLTASINK 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ +G P E T GGNALKFYASVRL+I+RIG +K+ +E IG+
Sbjct: 196 SNTMVIFINQIRMKIGVM-YGSP-ETTTGGNALKFYASVRLDIRRIGAIKERDEVIGNTT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G+G+S+ EI+DL +K K+GA F+Y+ + +G+
Sbjct: 254 RVKVVKNKLAPPFKQVEFDIMYGEGVSKMGEILDLGVKAGIVEKSGAWFSYDSQRLGQGR 313
Query: 303 EAFKQFLVENE--SVREELVIKLREKLVVDHKEPQTAVTDEDSTE 345
E K FL N + + E I+ L+ + A D D E
Sbjct: 314 ENSKSFLKANPDMTAKIEAAIRQNSGLIAEQILAGAAERDADGEE 358
>gi|383188654|ref|YP_005198782.1| protein RecA [Rahnella aquatilis CIP 78.65 = ATCC 33071]
gi|371586912|gb|AEX50642.1| protein RecA [Rahnella aquatilis CIP 78.65 = ATCC 33071]
Length = 354
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/344 (55%), Positives = 245/344 (71%), Gaps = 4/344 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A+ +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV++VDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+G+ +GS+
Sbjct: 185 NANTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAIKEGDVVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK+VKNK+A PFK A+F++ +G+GI+ E+IDL +KHK KAGA ++YN +G
Sbjct: 243 TRVKVVKNKIAAPFKQAEFQILYGEGININGELIDLGVKHKLIEKAGAWYSYNGEKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTE 345
K +L EN V EL KLR+ L+ E A T +D+ +
Sbjct: 303 KANSCNYLKENPKVAAELDKKLRDMLLSGTGELSVATTADDADD 346
>gi|300722253|ref|YP_003711537.1| DNA strand exchange and recombination protein [Xenorhabdus
nematophila ATCC 19061]
gi|298286856|sp|Q9X5P5.2|RECA_XENNA RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|297628754|emb|CBJ89332.1| DNA strand exchange and recombination protein with protease and
nuclease activity [Xenorhabdus nematophila ATCC 19061]
Length = 358
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/350 (56%), Positives = 251/350 (71%), Gaps = 9/350 (2%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + + V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGENRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A+ +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQREGRTCAFIDAEHALDPVYAKKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV++VDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALSRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+R G VK G+E +GS+
Sbjct: 185 NSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRTGSVKNGDEVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+ E+IDL +KHK KAGA ++YN D+ +G
Sbjct: 243 TRVKVVKNKVAAPFKQAEFQILYGEGINTLGELIDLGVKHKMVEKAGAWYSYNGDKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTD-----EDSTEE 346
K +L E+ EL KLR+ L+ + + +A +D ED+TEE
Sbjct: 303 KANATIYLKEHPETAAELNKKLRDLLLHNTGDFSSAASDYVTDYEDNTEE 352
>gi|365891769|ref|ZP_09430150.1| Recombinase A (recA) [Bradyrhizobium sp. STM 3809]
gi|365332255|emb|CCE02681.1| Recombinase A (recA) [Bradyrhizobium sp. STM 3809]
Length = 349
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/345 (55%), Positives = 247/345 (71%), Gaps = 5/345 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGS+M LG++ V VSTGS LDIALG GGLPKGR+VEI
Sbjct: 3 KSKALSAALSQIERQFGKGSVMKLGKNDRSMDVETVSTGSLGLDIALGIGGLPKGRIVEI 62
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH +AEAQ++GG C FIDAEHALDP A +GV + LL++QPD GEQ
Sbjct: 63 YGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTGEQ 122
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+VVDSVAALVPK EL+GEMG++ +QARLMSQALRKL+ S++
Sbjct: 123 ALEICDTLVRSGAVDVMVVDSVAALVPKAELEGEMGESLPGLQARLMSQALRKLTASINK 182
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ +G P E T GGNALKFYASVRL+I+RIG +K+ +E IG+
Sbjct: 183 SNTMVIFINQIRMKIGVM-YGSP-ETTTGGNALKFYASVRLDIRRIGAIKERDEVIGNTT 240
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G+G+S+ EI+DL +K K+GA F+Y+ + +G+
Sbjct: 241 RVKVVKNKLAPPFKQVEFDIMYGEGVSKMGEILDLGVKAGIVEKSGAWFSYDSQRLGQGR 300
Query: 303 EAFKQFLVENE--SVREELVIKLREKLVVDHKEPQTAVTDEDSTE 345
E K FL N + + E I+ L+ + A D D E
Sbjct: 301 ENSKSFLKANPDMTAKIEAAIRQNSGLIAEQILAGAAERDADGEE 345
>gi|456012640|gb|EMF46328.1| RecA protein [Planococcus halocryophilus Or1]
Length = 353
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/326 (56%), Positives = 243/326 (74%), Gaps = 4/326 (1%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
MS + AL AL QI FGKGS+M LG T R++ VS+GS ALD ALG GG P+GRV
Sbjct: 1 MSDRKAALDMALKQIEKQFGKGSVMKLGEK-TDRNISSVSSGSLALDTALGIGGYPRGRV 59
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+E+YGPE+SGKTT++LH IAE Q GG FIDAEHALDP A+ +GV + LLL+QPD
Sbjct: 60 IEVYGPESSGKTTVSLHAIAEVQAIGGTAAFIDAEHALDPVYAKNLGVNIDELLLSQPDT 119
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + + L+RSG+VD+VVVDSVAALVPK E++GEMGD+HM +QARLMSQALRKLS
Sbjct: 120 GEQALEIAEALVRSGAVDIVVVDSVAALVPKAEIEGEMGDSHMGLQARLMSQALRKLSGV 179
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
++ S TI+IFINQ+R K+ FG P E T GG ALKFY+SVRL ++R +K G E IG
Sbjct: 180 INKSNTIVIFINQIREKIGVM-FGNP-ETTPGGRALKFYSSVRLEVRRAEALKSGTEIIG 237
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNF 299
++ +K+VKNK+APPF+TA+ ++ +GKGISRE EI+D+ + K+G+ ++YN +R
Sbjct: 238 NRTKIKVVKNKVAPPFRTAEVDIMYGKGISREGEIVDIGSDLEIIQKSGSWYSYNEERIG 297
Query: 300 RGKEAFKQFLVENESVREELVIKLRE 325
+G+E KQFL++N +R E+ K+RE
Sbjct: 298 QGRENVKQFLLKNPEIRNEISNKIRE 323
>gi|255021553|ref|ZP_05293596.1| RecA protein [Acidithiobacillus caldus ATCC 51756]
gi|340782427|ref|YP_004749034.1| RecA protein [Acidithiobacillus caldus SM-1]
gi|254968941|gb|EET26460.1| RecA protein [Acidithiobacillus caldus ATCC 51756]
gi|340556579|gb|AEK58333.1| RecA protein [Acidithiobacillus caldus SM-1]
Length = 347
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 184/319 (57%), Positives = 240/319 (75%), Gaps = 3/319 (0%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL AL QI FGKG+IM LG + + V STGS LD+ALG GGLP+GRVVEIYGP
Sbjct: 8 ALAAALSQIDKQFGKGAIMRLGEQSAVKDIQVYSTGSLGLDLALGVGGLPRGRVVEIYGP 67
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTTL LH IA Q GG FIDAEHALDPS A+ +GV ENLL++QPD GEQAL
Sbjct: 68 ESSGKTTLTLHAIASCQASGGTAAFIDAEHALDPSYAQKLGVDLENLLISQPDTGEQALE 127
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ D L+RSG+VD++VVDSVAAL PK E++GEMGD+H+ +QARLMSQALRKL+ ++S + T
Sbjct: 128 IADMLVRSGAVDLIVVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANISRTNT 187
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
++IFINQ+R K+ +G P E T GGNALKFYASVRL+I+RIG +KKG+E +GS VK
Sbjct: 188 LVIFINQIRMKIGVM-YGSP-ETTTGGNALKFYASVRLDIRRIGTIKKGDEILGSDTRVK 245
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRGKEAF 305
+VKNK+APPF+ A+F + +G+GISR SE++DL +K K+GA ++Y +R +GK+
Sbjct: 246 VVKNKVAPPFREAEFAIYYGEGISRLSELVDLGVKFDIIEKSGAWYSYKGERIGQGKDNA 305
Query: 306 KQFLVENESVREELVIKLR 324
+QFL E + +E+ ++R
Sbjct: 306 RQFLKERPEMAKEIEERVR 324
>gi|120598088|ref|YP_962662.1| recombinase A [Shewanella sp. W3-18-1]
gi|146293841|ref|YP_001184265.1| recombinase A [Shewanella putrefaciens CN-32]
gi|386314590|ref|YP_006010755.1| recA protein [Shewanella putrefaciens 200]
gi|166220680|sp|A4Y933.1|RECA_SHEPC RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|166220682|sp|A1RHG3.1|RECA_SHESW RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|120558181|gb|ABM24108.1| recA protein [Shewanella sp. W3-18-1]
gi|145565531|gb|ABP76466.1| recA protein [Shewanella putrefaciens CN-32]
gi|319427215|gb|ADV55289.1| recA protein [Shewanella putrefaciens 200]
Length = 357
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/347 (53%), Positives = 250/347 (72%), Gaps = 4/347 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K+ AL L QI FGKGSIM LG + V +STGS +LD+ALG GGLP GR+VE
Sbjct: 6 NKEKALAAVLSQIEKQFGKGSIMKLGEDRS-MDVETISTGSLSLDVALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A+ +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLEVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV+VVDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALTRSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+R G +K G+E +G++
Sbjct: 185 QSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRTGAIKDGDEVVGNE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+R E++DL + HK KAGA ++Y D+ +G
Sbjct: 243 TRVKVVKNKVAAPFKQAEFQILYGQGINRTGELVDLGVAHKLIEKAGAWYSYKGDKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETV 348
+ ++L EN ++ E+ LRE L+ + ++ +D++STE +
Sbjct: 303 RANAGKYLTENPAIAAEIDKTLRELLLSNPSALASSASDDESTEGNI 349
>gi|227590|prf||1707271C recA gene
Length = 355
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 191/339 (56%), Positives = 244/339 (71%), Gaps = 5/339 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + +V +STGS LD+ALG GGLP+GR+VE
Sbjct: 5 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MNVETISTGSLYLDVALGAGGLPRGRIVE 63
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+ GKTTL L VIA AQR+G C FIDAEHALDP A+ +GV +NLL +QPD GE
Sbjct: 64 IYGPESYGKTTLTLQVIAAAQREGKICAFIDAEHALDPIYAQKLGVDIDNLLCSQPDTGE 123
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV+VVDSVAAL PK E++GE+GD+H+ + AR+MSQA+RKL+ +L
Sbjct: 124 QALEICDALSRSGAVDVIVVDSVAALTPKAEIEGEIGDSHVGLAARMMSQAMRKLAGNLK 183
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK G+E +GS+
Sbjct: 184 NSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGSVKNGDEVVGSE 241
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK+VKNK+A PFK A+F++ +G+GI+ E+IDL +KHK KAGA ++YN +G
Sbjct: 242 TRVKVVKNKIAAPFKQAEFQIMYGEGINTFGELIDLGVKHKLVEKAGAWYSYNGEKIGQG 301
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTD 340
K +L EN + EL KLRE ++++H T+ D
Sbjct: 302 KANATTYLKENPEMYNELNTKLRE-MLLNHAGEFTSARD 339
>gi|403727403|ref|ZP_10947638.1| protein RecA [Gordonia rhizosphera NBRC 16068]
gi|403203986|dbj|GAB91969.1| protein RecA [Gordonia rhizosphera NBRC 16068]
Length = 347
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 184/325 (56%), Positives = 250/325 (76%), Gaps = 4/325 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
++ AL AL QI SFGKGS+M LG + + + V+ TGS ALD+ALG GGLP+GRVVEI
Sbjct: 8 REKALDLALAQIDKSFGKGSVMRLGEE-SRQPIEVIPTGSIALDVALGIGGLPRGRVVEI 66
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ALH +A AQ GG FIDAEHALDP A +GV T+ LL++QPD GEQ
Sbjct: 67 YGPESSGKTTVALHAVANAQAAGGIAAFIDAEHALDPDYAARLGVDTDALLVSQPDTGEQ 126
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D LIRSG++D++V+DSVAALVPK E++GEMGD+H+ +QARLMSQALRK++ +LS
Sbjct: 127 ALEIADMLIRSGALDILVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKMTSALSN 186
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+T IFINQ+R K+ FG P E T GG ALKFY+SVRL+++RI +K G E +G++
Sbjct: 187 SKTTAIFINQLREKIGVM-FGSP-ETTTGGKALKFYSSVRLDVRRIETLKDGTEAVGNRT 244
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGK 302
VK+VKNK+APPFK A+F++ +G+GIS+E +ID+ + F K+G+ FTY+ D+ +GK
Sbjct: 245 RVKVVKNKVAPPFKQAEFDILYGQGISKEGSLIDMGVAEGFIRKSGSWFTYDGDQLGQGK 304
Query: 303 EAFKQFLVENESVREELVIKLREKL 327
E ++FL+EN+ +R+E+ K++EKL
Sbjct: 305 ENARKFLLENDDIRDEIEKKIKEKL 329
>gi|383389131|gb|AFH09543.1| recombinase A [Aeromonas bestiarum]
gi|383389147|gb|AFH09551.1| recombinase A [Aeromonas bestiarum]
gi|383389149|gb|AFH09552.1| recombinase A [Aeromonas bestiarum]
gi|383389171|gb|AFH09563.1| recombinase A [Aeromonas bestiarum]
Length = 353
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/326 (56%), Positives = 243/326 (74%), Gaps = 4/326 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGSIM LG S T + +STGS +LD+ALG GGLP GR+VEI
Sbjct: 5 KQKALAAALGQIEKQFGKGSIMRLGDSKT-MDIEAISTGSLSLDVALGIGGLPCGRIVEI 63
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIAEAQ++G C FIDAEHALDP A +GV ++LL++QPD GEQ
Sbjct: 64 YGPESSGKTTLTLQVIAEAQKKGKVCAFIDAEHALDPIYAAKLGVNVDDLLISQPDTGEQ 123
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RS +VDV++VDSVAAL PK E++GEMGD+H+ +QARLMSQALRKL+ ++
Sbjct: 124 ALEICDMLVRSNAVDVIIVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKN 183
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
+ + IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+G+E +G++
Sbjct: 184 ANCLCIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAIKEGDEVVGNET 241
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK A+F++ +G GIS+E E++DL +KHK KAGA ++YN +GK
Sbjct: 242 RVKVVKNKVAPPFKQAEFQIFYGVGISKEGELVDLGVKHKLIDKAGAWYSYNGEKIGQGK 301
Query: 303 EAFKQFLVENESVREELVIKLREKLV 328
+ EN+++ E+ +LRE L+
Sbjct: 302 ANVMKLFSENKAMAAEVEARLRELLL 327
>gi|383770750|ref|YP_005449813.1| recombinase A [Bradyrhizobium sp. S23321]
gi|381358871|dbj|BAL75701.1| recombinase A [Bradyrhizobium sp. S23321]
Length = 362
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 190/345 (55%), Positives = 248/345 (71%), Gaps = 5/345 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGS+M LG++ V +S+GS LDIALG GGLPKGRVVEI
Sbjct: 16 KTKALAAALSQIERQFGKGSVMKLGKNDRSMDVEAISSGSLGLDIALGIGGLPKGRVVEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH +AEAQ++GG C FIDAEHALDP A +GV + LL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+VVDSVAALVPK EL+GEMGDA +QARLMSQALRKL+ S++
Sbjct: 136 ALEICDTLVRSGAVDVLVVDSVAALVPKAELEGEMGDALPGLQARLMSQALRKLTASINK 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ +G P E T GGNALKFYAS+RL+I+RIG +K+ +E +G+
Sbjct: 196 SNTMVIFINQIRMKIGVM-YGSP-ETTTGGNALKFYASIRLDIRRIGAIKERDEVVGNTT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G+G+S+ EI+DL +K K+GA F+Y+ + +G+
Sbjct: 254 RVKVVKNKLAPPFKQVEFDIMYGEGVSKMGEILDLGVKAGIVEKSGAWFSYDSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK--LVVDHKEPQTAVTDEDSTE 345
E K FL N + ++ +R+ L+ + T D D E
Sbjct: 314 ENSKAFLKANPDMTAKIETAIRQNSGLIAEQILAGTPERDADGEE 358
>gi|414161981|ref|ZP_11418228.1| protein recA [Afipia felis ATCC 53690]
gi|410879761|gb|EKS27601.1| protein recA [Afipia felis ATCC 53690]
Length = 360
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/324 (57%), Positives = 242/324 (74%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGS+M LG++ + V+S+GS LDIALG GGLPKGRVVEI
Sbjct: 16 KTKALTAALSQIERQFGKGSVMRLGKADRSMDIEVISSGSLGLDIALGVGGLPKGRVVEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH +AEAQ++GG C FIDAEHALDP A +GV + LL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALHTVAEAQKKGGTCAFIDAEHALDPVYARKLGVNVDELLISQPDHGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV++VDSVAALVP+ EL+GEMGDA +QARLMSQALRKL+ S++
Sbjct: 136 ALEIADTLVRSGAVDVLIVDSVAALVPRAELEGEMGDALPGLQARLMSQALRKLTASINK 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ +G P E T GGNALKFYASVRL+I+R G +K+ +E IG+
Sbjct: 196 SHTMVIFINQIRMKIGVM-YGSP-ETTTGGNALKFYASVRLDIRRTGAIKERDEVIGNST 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G+GIS+ EI+DL +K K+GA F+Y+ + +G+
Sbjct: 254 RVKVVKNKLAPPFKQVEFDIMYGEGISKMGEILDLGVKAGIVEKSGAWFSYDSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E K FL +N + ++ +R+
Sbjct: 314 ENSKAFLRDNPDMTAKIEAAIRQN 337
>gi|111023723|ref|YP_706695.1| recombinase A [Rhodococcus jostii RHA1]
gi|384100821|ref|ZP_10001878.1| recombinase A [Rhodococcus imtechensis RKJ300]
gi|419965972|ref|ZP_14481907.1| recombinase A [Rhodococcus opacus M213]
gi|424852176|ref|ZP_18276573.1| RecA protein [Rhodococcus opacus PD630]
gi|432335377|ref|ZP_19586967.1| recombinase A [Rhodococcus wratislaviensis IFP 2016]
gi|122955075|sp|Q0S1P9.1|RECA_RHOSR RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|110823253|gb|ABG98537.1| recombinase A [Rhodococcus jostii RHA1]
gi|356666841|gb|EHI46912.1| RecA protein [Rhodococcus opacus PD630]
gi|383841727|gb|EID81004.1| recombinase A [Rhodococcus imtechensis RKJ300]
gi|414568646|gb|EKT79404.1| recombinase A [Rhodococcus opacus M213]
gi|430777700|gb|ELB93033.1| recombinase A [Rhodococcus wratislaviensis IFP 2016]
Length = 347
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 188/339 (55%), Positives = 255/339 (75%), Gaps = 6/339 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
+D AL AL QI +FGKGS+M LG V + + V+ TGS ALD+ALG GGLP+GRVVEI
Sbjct: 8 RDKALDLALAQIDKNFGKGSVMRLGEGVR-QPIAVIPTGSIALDVALGIGGLPRGRVVEI 66
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ALH +A AQ GG FIDAEHALDP A+ +GV T+ LL++QPD GEQ
Sbjct: 67 YGPESSGKTTVALHAVANAQAAGGIAAFIDAEHALDPDYAQKLGVDTDALLVSQPDTGEQ 126
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D LIRSG++D++VVDSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ +LS
Sbjct: 127 ALEIADMLIRSGALDILVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTGALSN 186
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T IFINQ+R K+ FG P E T GG ALKFY+SVRL+++RI +K G + +G++
Sbjct: 187 SGTTAIFINQLREKIGVM-FGSP-ETTTGGKALKFYSSVRLDVRRIETLKDGTDAVGNRT 244
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRGK 302
VK+VKNK+APPFK A+F++ +G GIS+E +ID+ ++H F K+G+ +TY D+ +GK
Sbjct: 245 RVKVVKNKVAPPFKQAEFDILYGLGISKEGSLIDMGVEHGFIRKSGSWYTYEGDQLGQGK 304
Query: 303 EAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDE 341
E ++FL+EN +R+E+ K++EKL + TA TD+
Sbjct: 305 ENARKFLLENTDIRDEIEKKIKEKLGIGAD--VTAATDD 341
>gi|90019285|gb|ABD84293.1| RecA/RadA recombinase-like [Yersinia sp. MH-1]
Length = 355
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 190/336 (56%), Positives = 244/336 (72%), Gaps = 4/336 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKG+IM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGAIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A+ +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV++VDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+G+ +GS+
Sbjct: 185 NANTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKEGDVVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +KHK KAGA ++YN D+ +G
Sbjct: 243 TRVKVVKNKIAAPFKQAEFQILYGEGININGELVDLGVKHKLIEKAGAWYSYNGDKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTA 337
K +L EN ++ E+ KLRE L+ E TA
Sbjct: 303 KANASNYLKENPAIATEIDKKLREMLLSGAGEQSTA 338
>gi|383389113|gb|AFH09534.1| recombinase A [Aeromonas bestiarum]
gi|383389115|gb|AFH09535.1| recombinase A [Aeromonas bestiarum]
gi|383389117|gb|AFH09536.1| recombinase A [Aeromonas bestiarum]
gi|383389119|gb|AFH09537.1| recombinase A [Aeromonas bestiarum]
gi|383389121|gb|AFH09538.1| recombinase A [Aeromonas bestiarum]
gi|383389123|gb|AFH09539.1| recombinase A [Aeromonas bestiarum]
gi|383389125|gb|AFH09540.1| recombinase A [Aeromonas bestiarum]
gi|383389127|gb|AFH09541.1| recombinase A [Aeromonas bestiarum]
gi|383389129|gb|AFH09542.1| recombinase A [Aeromonas bestiarum]
gi|383389133|gb|AFH09544.1| recombinase A [Aeromonas bestiarum]
gi|383389135|gb|AFH09545.1| recombinase A [Aeromonas bestiarum]
gi|383389137|gb|AFH09546.1| recombinase A [Aeromonas bestiarum]
gi|383389139|gb|AFH09547.1| recombinase A [Aeromonas bestiarum]
gi|383389141|gb|AFH09548.1| recombinase A [Aeromonas bestiarum]
gi|383389143|gb|AFH09549.1| recombinase A [Aeromonas bestiarum]
gi|383389145|gb|AFH09550.1| recombinase A [Aeromonas bestiarum]
gi|383389151|gb|AFH09553.1| recombinase A [Aeromonas bestiarum]
gi|383389153|gb|AFH09554.1| recombinase A [Aeromonas bestiarum]
gi|383389155|gb|AFH09555.1| recombinase A [Aeromonas bestiarum]
gi|383389157|gb|AFH09556.1| recombinase A [Aeromonas bestiarum]
gi|383389159|gb|AFH09557.1| recombinase A [Aeromonas bestiarum]
gi|383389167|gb|AFH09561.1| recombinase A [Aeromonas bestiarum]
gi|383389169|gb|AFH09562.1| recombinase A [Aeromonas bestiarum]
gi|383389173|gb|AFH09564.1| recombinase A [Aeromonas bestiarum]
gi|383389175|gb|AFH09565.1| recombinase A [Aeromonas bestiarum]
gi|383389177|gb|AFH09566.1| recombinase A [Aeromonas bestiarum]
gi|383389179|gb|AFH09567.1| recombinase A [Aeromonas piscicola]
gi|383389181|gb|AFH09568.1| recombinase A [Aeromonas piscicola]
gi|383389183|gb|AFH09569.1| recombinase A [Aeromonas piscicola]
gi|383389185|gb|AFH09570.1| recombinase A [Aeromonas piscicola]
Length = 353
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 190/346 (54%), Positives = 250/346 (72%), Gaps = 7/346 (2%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGSIM LG S T + +STGS +LD+ALG GGLP GR+VEI
Sbjct: 5 KQKALAAALGQIEKQFGKGSIMRLGDSKT-MDIEAISTGSLSLDVALGIGGLPCGRIVEI 63
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIAEAQ++G C FIDAEHALDP A +GV ++LL++QPD GEQ
Sbjct: 64 YGPESSGKTTLTLQVIAEAQKKGKVCAFIDAEHALDPIYAAKLGVNVDDLLISQPDTGEQ 123
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RS +VDV++VDSVAAL PK E++GEMGD+H+ +QARLMSQALRKL+ ++
Sbjct: 124 ALEICDMLVRSNAVDVIIVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKN 183
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
+ + IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+G+E +G++
Sbjct: 184 ANCLCIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAIKEGDEVVGNET 241
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK A+F++ +G GIS+E E++DL +KHK KAGA ++YN +GK
Sbjct: 242 RVKVVKNKVAPPFKQAEFQIFYGVGISKEGELVDLGVKHKLIDKAGAWYSYNGEKIGQGK 301
Query: 303 EAFKQFLVENESVREELVIKLREKLV---VDHKEPQTAVTDEDSTE 345
+ EN+++ E+ +LRE L+ ++P A DE E
Sbjct: 302 ANVMKLFSENKAMAAEVEARLRELLLSGDAPAEKPVAADADELEAE 347
>gi|401764935|ref|YP_006579942.1| recombinase A [Enterobacter cloacae subsp. cloacae ENHKU01]
gi|400176469|gb|AFP71318.1| recombinase A [Enterobacter cloacae subsp. cloacae ENHKU01]
Length = 352
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 195/345 (56%), Positives = 245/345 (71%), Gaps = 4/345 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGSIM LG T V +STGS +LDIALG GGLP GR+VEI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRLGEDRT-MDVETISTGSLSLDIALGAGGLPMGRIVEI 65
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A +GV +NLL +QPD GEQ
Sbjct: 66 YGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGEQ 125
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L RSG+VDV+VVDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 126 ALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLKQ 185
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+GE +GS+
Sbjct: 186 SNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKEGENVVGSET 243
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGK 302
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +K K KAGA ++YN D+ +GK
Sbjct: 244 RVKVVKNKIAAPFKQAEFQILYGEGINFFGELVDLGVKEKLIEKAGAWYSYNGDKIGQGK 303
Query: 303 EAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEET 347
+L EN + +E+ K+RE L+ + V D EET
Sbjct: 304 ANAISWLKENPAAAKEIEKKVRELLLSNQDSKPDFVVDAADAEET 348
>gi|296448224|ref|ZP_06890120.1| recA protein [Methylosinus trichosporium OB3b]
gi|296254264|gb|EFH01395.1| recA protein [Methylosinus trichosporium OB3b]
Length = 358
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 183/323 (56%), Positives = 240/323 (74%), Gaps = 3/323 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI +FGKGSIM LG++ + +STGS LDIALG GGLP+GRVVEI
Sbjct: 16 KTKALDAALSQIERAFGKGSIMRLGKNQKAVEIETISTGSLGLDIALGVGGLPRGRVVEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL LHVIAEAQ++GG C F+DAEHALDP A +GV E LL++QPD GEQ
Sbjct: 76 YGPESSGKTTLTLHVIAEAQKKGGVCAFVDAEHALDPVYARKLGVNLEELLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+VVDSVAAL P+ E++GEMG+ +QARLMSQALRKL+ S+S
Sbjct: 136 ALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGEVQPGLQARLMSQALRKLTASISR 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ +G P E T GGNALKFYASVRL+I+RIG +K +E G+Q
Sbjct: 196 SNTLVIFINQIRMKIGVM-YGSP-ETTTGGNALKFYASVRLDIRRIGSIKDRDEVTGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E++DL +K K+GA F+++ + +G+
Sbjct: 254 RVKVVKNKVAPPFKQVEFDIMYGEGVSKVGELVDLGVKAGVVDKSGAWFSFDSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLRE 325
E K FL +N+ E + +RE
Sbjct: 314 ENAKAFLKQNKEAAERIEAAIRE 336
>gi|363420339|ref|ZP_09308431.1| recombinase A [Rhodococcus pyridinivorans AK37]
gi|359735581|gb|EHK84538.1| recombinase A [Rhodococcus pyridinivorans AK37]
Length = 347
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/346 (54%), Positives = 256/346 (73%), Gaps = 9/346 (2%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
++ AL+ AL QI SFGKGS+M LG V P + V+ TGS ALD+ALG GGLP+GRV+EI
Sbjct: 8 REKALELALAQIDKSFGKGSVMRLGEDVRP-PIAVIPTGSIALDVALGIGGLPRGRVIEI 66
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ALH +A AQ GG FIDAEHALDP A +GV T+ LL++QPD GEQ
Sbjct: 67 YGPESSGKTTVALHAVANAQAAGGIAAFIDAEHALDPDYARKLGVDTDALLVSQPDTGEQ 126
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D LIRSG++D++V+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ +L+
Sbjct: 127 ALEIADMLIRSGALDIIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTGALNN 186
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T IFINQ+R K+ FG P E T GG ALKFYASVRL+++RI +K G + +G++
Sbjct: 187 SGTTAIFINQLREKIGVM-FGSP-ETTTGGKALKFYASVRLDVRRIETLKDGGDAVGNRT 244
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRGK 302
VK+VKNK++PPFK A+F++ +G+GIS+E +ID+ ++ F K+G+ +TY D+ +GK
Sbjct: 245 RVKVVKNKVSPPFKQAEFDILYGQGISKEGSLIDMGVEQGFIRKSGSWYTYEGDQLGQGK 304
Query: 303 EAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETV 348
E ++FL+EN VR+E+ K++EKL + +TD EE V
Sbjct: 305 ENARKFLLENTDVRDEIEKKIKEKLGIG-----AVLTDPSDVEEPV 345
>gi|262202135|ref|YP_003273343.1| recA protein [Gordonia bronchialis DSM 43247]
gi|262085482|gb|ACY21450.1| recA protein [Gordonia bronchialis DSM 43247]
Length = 347
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 183/325 (56%), Positives = 250/325 (76%), Gaps = 4/325 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
++ AL AL QI +FGKGS+M LG T + + V+ TGS ALD+ALG GGLP+GR+VE+
Sbjct: 8 REKALDLALAQIDKNFGKGSVMRLGEE-TRQPIEVIPTGSIALDVALGIGGLPRGRIVEV 66
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ALH +A AQ QGG FIDAEHALDP A +GV T+ LL++QPD GEQ
Sbjct: 67 YGPESSGKTTVALHAVANAQAQGGIAAFIDAEHALDPDYAARLGVDTDALLVSQPDTGEQ 126
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D LIRSG++D++V+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ +LS
Sbjct: 127 ALEIADMLIRSGALDILVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTSALSN 186
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+T IFINQ+R K+ FG P E T GG ALKFY+SVRL+++RI +K G + +G++
Sbjct: 187 SKTTAIFINQLREKIGVM-FGSP-ETTTGGKALKFYSSVRLDVRRIETLKDGTDAVGNRT 244
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRGK 302
VK+VKNK+APPFK A+F++ +G+GIS+E +ID+ + F K+G+ FTY D+ +GK
Sbjct: 245 RVKVVKNKVAPPFKQAEFDILYGQGISKEGSLIDMGVAEGFIRKSGSWFTYEGDQLGQGK 304
Query: 303 EAFKQFLVENESVREELVIKLREKL 327
E ++FL+ENE VR+E+ K++EKL
Sbjct: 305 ENARKFLLENEDVRDEIEKKIKEKL 329
>gi|395779782|ref|ZP_10460251.1| protein recA [Bartonella washoensis 085-0475]
gi|395420157|gb|EJF86442.1| protein recA [Bartonella washoensis 085-0475]
Length = 347
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/324 (57%), Positives = 239/324 (73%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI SFGKGSIM LG+ + + TGS +LDIALG GGLPKGR++EI
Sbjct: 3 KTKALDAALSQIERSFGKGSIMRLGQKEQVVEIETIPTGSLSLDIALGVGGLPKGRIIEI 62
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH IAEAQ+ GG C FIDAEHALDP A +GV ENL ++QPD GEQ
Sbjct: 63 YGPESSGKTTLALHAIAEAQKSGGICAFIDAEHALDPIYARKLGVDLENLFISQPDTGEQ 122
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + +TL+RSG+VDV+VVDSVAAL P+ E+DGEMGDA +QARLMS+ALRKL+ ++
Sbjct: 123 ALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDALPGLQARLMSKALRKLTSAIFR 182
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S +++FINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K + +G+Q
Sbjct: 183 SNCMVVFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKDRDAIVGNQT 240
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G+GIS+ E+IDL +K K+GA F+YN + +G+
Sbjct: 241 RVKVVKNKLAPPFKQVEFDIIYGEGISKVGELIDLGVKVGIVEKSGAWFSYNSQRLGQGR 300
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E KQFL E+E + E+ LR+
Sbjct: 301 ENAKQFLREHEEIATEIETALRQN 324
>gi|389737230|ref|ZP_10190694.1| protein RecA [Rhodanobacter sp. 115]
gi|388436702|gb|EIL93551.1| protein RecA [Rhodanobacter sp. 115]
Length = 345
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 188/330 (56%), Positives = 242/330 (73%), Gaps = 4/330 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKG++M +G V + +STGS LDIALG GGLP GRVVEI
Sbjct: 5 KRKALASALGQIEKQFGKGAVMRMGDRVN-EAIATISTGSLGLDIALGVGGLPCGRVVEI 63
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ L IA QR GG F+DAEHALDP+ AE +GV ++LL++QPD GEQ
Sbjct: 64 YGPESSGKTTMTLQAIASCQRAGGTAAFVDAEHALDPTYAEKLGVNVDDLLVSQPDTGEQ 123
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RSG+VD+VVVDSVAAL PK E++GEMGD+H+ + ARLMSQALRKL+ ++
Sbjct: 124 ALEIADMLVRSGAVDMVVVDSVAALTPKAEIEGEMGDSHVGLHARLMSQALRKLTANIKK 183
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VKKGEE IGS+
Sbjct: 184 SGCLVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAVKKGEEIIGSET 241
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRGK 302
VK+VKNK+APPF+ +FE+ +G+G SRE EII+L + K+GA ++Y DR +GK
Sbjct: 242 RVKVVKNKVAPPFRKCEFEILYGEGTSREGEIIELGVAESLIDKSGAWYSYKGDRIGQGK 301
Query: 303 EAFKQFLVENESVREELVIKLREKLVVDHK 332
E +QFL +N ++ E+ +LR +L+V K
Sbjct: 302 ENVRQFLRDNPAIANEIDKELRARLLVSAK 331
>gi|77359646|ref|YP_339221.1| RecA protein (recombinase A) [Pseudoalteromonas haloplanktis
TAC125]
gi|76874557|emb|CAI85778.1| RecA protein (Recombinase A) [Pseudoalteromonas haloplanktis
TAC125]
Length = 347
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/327 (57%), Positives = 245/327 (74%), Gaps = 4/327 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGSIM LG + ++ VSTGS +DIALG GGLP GR+VE+
Sbjct: 5 KQKALDAALSQIERQFGKGSIMKLGDN-KALNIESVSTGSLGIDIALGIGGLPMGRIVEV 63
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIAEAQ++G C FIDAEHALDP A+ +GV + L ++QPD GEQ
Sbjct: 64 YGPESSGKTTLTLQVIAEAQKEGKTCAFIDAEHALDPVYAQKLGVNIDELFVSQPDTGEQ 123
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RS +VDVV++DSVAAL PK E++G+MGD+HM +QARLMSQALRKL+ ++
Sbjct: 124 ALEICDMLVRSSAVDVVIIDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTGNIKR 183
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T+ IFINQ+R K+ FG P E T GGNALKFYASVR++I+RIG VK+G+E +G++
Sbjct: 184 SNTLCIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRIDIRRIGSVKEGDEVVGNET 241
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRGK 302
VKIVKNK+APPFK A+F + +G+GIS++ E+IDL +KHK KAGA ++Y ++ +GK
Sbjct: 242 RVKIVKNKVAPPFKQAEFIIMYGEGISKQGELIDLGVKHKIVEKAGAWYSYCGNKVGQGK 301
Query: 303 EAFKQFLVENESVREELVIKLREKLVV 329
+FL EN + +E+ KLRE L++
Sbjct: 302 SNSIKFLKENPEIADEIEGKLREMLLL 328
>gi|359442485|ref|ZP_09232352.1| recombination protein RecA [Pseudoalteromonas sp. BSi20429]
gi|392534920|ref|ZP_10282057.1| RecA protein (recombinase A) [Pseudoalteromonas arctica A 37-1-2]
gi|358035684|dbj|GAA68601.1| recombination protein RecA [Pseudoalteromonas sp. BSi20429]
Length = 347
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/327 (57%), Positives = 245/327 (74%), Gaps = 4/327 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGSIM LG + ++ VSTGS +DIALG GGLP GR+VE+
Sbjct: 5 KQKALDAALSQIERQFGKGSIMKLGDN-KALNIESVSTGSLGIDIALGIGGLPMGRIVEV 63
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIAEAQ++G C FIDAEHALDP A+ +GV + L ++QPD GEQ
Sbjct: 64 YGPESSGKTTLTLQVIAEAQKEGKTCAFIDAEHALDPVYAQKLGVNIDELFVSQPDTGEQ 123
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RS +VDVV++DSVAAL PK E++G+MGD+HM +QARLMSQALRKL+ ++
Sbjct: 124 ALEICDMLVRSSAVDVVIIDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTGNIKR 183
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T+ IFINQ+R K+ FG P E T GGNALKFYASVR++I+RIG VK+G+E +G++
Sbjct: 184 SNTLCIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRIDIRRIGSVKEGDEVVGNET 241
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRGK 302
VKIVKNK+APPFK A+F + +G+GIS++ E+IDL +KHK KAGA ++Y ++ +GK
Sbjct: 242 RVKIVKNKVAPPFKQAEFIIMYGEGISKQGELIDLGVKHKIVEKAGAWYSYCGNKVGQGK 301
Query: 303 EAFKQFLVENESVREELVIKLREKLVV 329
+FL EN + +E+ KLRE L++
Sbjct: 302 SNSIKFLKENPEIADEIEGKLREMLLL 328
>gi|381394663|ref|ZP_09920375.1| recombination protein RecA [Glaciecola punicea DSM 14233 = ACAM
611]
gi|379329630|dbj|GAB55508.1| recombination protein RecA [Glaciecola punicea DSM 14233 = ACAM
611]
Length = 396
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/333 (56%), Positives = 250/333 (75%), Gaps = 4/333 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
KK+ AL AL QI FGKG+IM LG + + +STGS +DIALG GGLP GRVVE
Sbjct: 44 KKNQALTAALGQIEKQFGKGAIMRLGDN-QALDIESISTGSLTIDIALGIGGLPCGRVVE 102
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIAEAQ++G C F+DAEHALDP A+ +GV + LL++QPD GE
Sbjct: 103 IYGPESSGKTTLTLQVIAEAQKKGKTCAFVDAEHALDPIYAKKLGVNIDELLVSQPDTGE 162
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL +VD L+RS +VDVVV+DSVAAL P+ E++G+MG +H+ +QARLMSQALRKL+ ++
Sbjct: 163 QALEIVDMLVRSAAVDVVVIDSVAALTPRAEIEGDMGASHVGLQARLMSQALRKLTANIK 222
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK G+E +G++
Sbjct: 223 RSNTMVIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKDGDEVVGNE 280
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+APPFK A+F++ +G GIS+E+E+IDL + K KAGA ++YN +R +G
Sbjct: 281 TRVKVVKNKVAPPFKQAEFQIMYGSGISKEAELIDLGVSQKLVEKAGAWYSYNGERIGQG 340
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEP 334
K ++L E+ S+ EE+ K+R +L++ +P
Sbjct: 341 KANVVKYLKEHVSMAEEIEAKIRAELLMPKAKP 373
>gi|420236829|ref|ZP_14741306.1| recombinase A [Parascardovia denticolens IPLA 20019]
gi|391879932|gb|EIT88432.1| recombinase A [Parascardovia denticolens IPLA 20019]
Length = 373
Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/324 (55%), Positives = 246/324 (75%), Gaps = 4/324 (1%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVV 61
+++ AL AL Q+ +FGKGS M LG +HV V+ TGS ALD+ALG GGLP+GR+V
Sbjct: 13 ARRQAALDTALAQVEKTFGKGSAMRLGDKPV-QHVEVIPTGSLALDLALGIGGLPRGRIV 71
Query: 62 EIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCG 121
EIYGPE+SGKTT+ALH +A AQ+ GG FIDAEHALDP A +GV T++L+++QPD G
Sbjct: 72 EIYGPESSGKTTIALHAVANAQKAGGVAAFIDAEHALDPEYARKLGVDTDSLIISQPDNG 131
Query: 122 EQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSL 181
EQAL + D LIRSG++D++V+DSVAALVPK E+DGEMGD+H+ +QARLMSQALRK++ +L
Sbjct: 132 EQALEIADMLIRSGALDIIVIDSVAALVPKAEIDGEMGDSHVGLQARLMSQALRKMTGAL 191
Query: 182 SLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGS 241
S S T IFINQ+R K+ FG P E T GG ALKFYASVRL+I+RI +K G+E +G+
Sbjct: 192 SQSNTTAIFINQLREKIGVM-FGNP-ETTTGGKALKFYASVRLDIRRIQTLKNGDEAVGN 249
Query: 242 QIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFR 300
+ VK+VKNK+APPFK+A+F++ +G+G+SRE I+D+ L K+G+ FTY+ D+ +
Sbjct: 250 RTRVKVVKNKMAPPFKSAEFDILYGEGVSREGSILDMGLALDLVKKSGSWFTYDGDQLGQ 309
Query: 301 GKEAFKQFLVENESVREELVIKLR 324
G+E +QFL +N + +E+ K++
Sbjct: 310 GREKARQFLKDNPQLADEIETKVK 333
>gi|291457715|ref|ZP_06597105.1| protein RecA [Bifidobacterium breve DSM 20213 = JCM 1192]
gi|291380768|gb|EFE88286.1| protein RecA [Bifidobacterium breve DSM 20213 = JCM 1192]
Length = 416
Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust.
Identities = 184/323 (56%), Positives = 250/323 (77%), Gaps = 4/323 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K+ AL AL Q+ SFGKGS M LG ++V V+ TGS ALD+ALG GGLPKGR+VE
Sbjct: 44 KRKAALDTALAQVEKSFGKGSAMRLGDQPV-QNVEVIPTGSLALDMALGIGGLPKGRIVE 102
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTLALHV+A AQ++GG +IDAEHALDP+ A +GV T++L+++QPD GE
Sbjct: 103 IYGPESSGKTTLALHVVANAQKKGGVAAYIDAEHALDPAYARKLGVDTDSLIVSQPDNGE 162
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D LIRSG++DV+V+DSVAALVPK E++GEMGD+H+ +QARLMSQALRK++ +L+
Sbjct: 163 QALEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKMTGALA 222
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ T IFINQ+R K+ F FG P E T GG ALKFYASVRL+I+RI +K G+E +G++
Sbjct: 223 QAGTTAIFINQLREKIGVF-FGNP-ETTTGGKALKFYASVRLDIRRIQTLKNGDEAVGNR 280
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRG 301
VK+VKNK+APPFK+A+F++ +G+GISRE +ID+A + K+G+ FTY D+ +G
Sbjct: 281 TRVKVVKNKMAPPFKSAEFDMLYGEGISREGSVIDMAQQVGVVKKSGSWFTYEGDQLGQG 340
Query: 302 KEAFKQFLVENESVREELVIKLR 324
+E +QFL +N ++ EE+ K++
Sbjct: 341 REKVRQFLKDNPAITEEIENKVK 363
>gi|149924950|ref|ZP_01913278.1| recombinase A [Plesiocystis pacifica SIR-1]
gi|149814175|gb|EDM73790.1| recombinase A [Plesiocystis pacifica SIR-1]
Length = 378
Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust.
Identities = 188/336 (55%), Positives = 248/336 (73%), Gaps = 5/336 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRS--VTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
++ A+ AL I FGKGSIM L + + VPVV TG LDIALG GGLP+GR+
Sbjct: 13 QRSAAIDLALATIEKQFGKGSIMRLSADGKLPSQDVPVVPTGCLGLDIALGIGGLPRGRI 72
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
VEIYGPE+SGKTTL LH +AEAQRQGG C FIDAEHALD A IGVKTE+LL++QPD
Sbjct: 73 VEIYGPESSGKTTLTLHAVAEAQRQGGVCAFIDAEHALDVGYARKIGVKTEDLLISQPDY 132
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + D L+RSG++DV+VVDSVAAL PK EL+GEMGD+H+ +QARLMSQALRKL+ S
Sbjct: 133 GEQALEICDMLVRSGAIDVIVVDSVAALTPKAELEGEMGDSHVGLQARLMSQALRKLTGS 192
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
+S +T++IFINQ+R+K+ FG P E T GGNALKFY+SVRL+I+RIG +K+G++ G
Sbjct: 193 VSRGRTLVIFINQLRSKIGVM-FGSP-ETTTGGNALKFYSSVRLDIRRIGKIKQGDQVTG 250
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNF 299
++ VK+VKNK+APPF+ +F++ FG+G+S+E +IDL ++ K KAGA +Y DR
Sbjct: 251 NRTRVKVVKNKMAPPFREVEFDINFGEGVSKEGMLIDLGVEAKVLDKAGAWLSYKGDRIG 310
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVDHKEPQ 335
+G+E K FL EN+ + + ++ K +D P+
Sbjct: 311 QGRERAKDFLRENKDIFGAIEAEVLSKHGLDRPAPE 346
>gi|383389255|gb|AFH09605.1| recombinase A [Aeromonas hydrophila subsp. ranae]
Length = 354
Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust.
Identities = 184/326 (56%), Positives = 243/326 (74%), Gaps = 4/326 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGSIM LG S T + +STGS +LD+ALG GGLP GR+VEI
Sbjct: 5 KQKALAAALGQIEKQFGKGSIMRLGDSKT-MDIEAISTGSLSLDVALGIGGLPCGRIVEI 63
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIAEAQ++G C F+DAEHALDP A +GV ++LL++QPD GEQ
Sbjct: 64 YGPESSGKTTLTLQVIAEAQKKGKTCAFVDAEHALDPIYAAKLGVNVDDLLISQPDTGEQ 123
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RS +VDV++VDSVAAL PK E++GEMGD+H+ +QARLMSQALRKL+ ++
Sbjct: 124 ALEICDMLVRSNAVDVIIVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKN 183
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
+ + IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+G+E +G++
Sbjct: 184 ANCLCIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAIKEGDEVVGNET 241
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK A+F++ +G GIS+E E++DL +KHK KAGA ++YN +GK
Sbjct: 242 RVKVVKNKVAPPFKQAEFQIFYGAGISKEGELVDLGVKHKLIDKAGAWYSYNGEKIGQGK 301
Query: 303 EAFKQFLVENESVREELVIKLREKLV 328
+ EN+++ E+ +LRE L+
Sbjct: 302 ANVMKLFAENKAMAGEVEARLRELLL 327
>gi|310777953|ref|YP_003966286.1| recA protein [Ilyobacter polytropus DSM 2926]
gi|309747276|gb|ADO81938.1| recA protein [Ilyobacter polytropus DSM 2926]
Length = 353
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 190/350 (54%), Positives = 257/350 (73%), Gaps = 8/350 (2%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
++ KD AL+ A+ QI FG+GSIM LG + T +V +STGS +D+ALG GG+P+GRV
Sbjct: 8 IADKDKALEVAMKQIQKDFGEGSIMKLGAN-THMNVETISTGSIGIDMALGLGGVPRGRV 66
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
VEIYG E+ GKTT+ALH++AEAQ++GG FIDAEHALDP+ A +GV + LL++QPD
Sbjct: 67 VEIYGAESCGKTTVALHIVAEAQKKGGIAAFIDAEHALDPAYARALGVDVDELLISQPDN 126
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + D L+RSG+VDV+VVDSVAALVPK E++GEMGD M +QARLMS+ALRKL+ S
Sbjct: 127 GEQALEIGDMLVRSGAVDVIVVDSVAALVPKSEIEGEMGDQQMGLQARLMSKALRKLTGS 186
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
L+ S+T +IFINQ+R K+ FGF GP T GG ALKFY+SVR+ IKRIG VK+G+ IG
Sbjct: 187 LNKSKTTMIFINQIREKIGGFGF-GPQTTTTGGRALKFYSSVRMEIKRIGSVKQGDNVIG 245
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYND-RNF 299
++ ++KI KNK+APPFK A+F++ +GKGISR EI+D+A+ + SK+GA F+Y D R
Sbjct: 246 NETSIKITKNKIAPPFKEAKFQIMYGKGISRAGEILDMAIDNDIVSKSGAWFSYGDIRLG 305
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETVS 349
+GKE K L E + + ++ L + L P+ V+++ E+T S
Sbjct: 306 QGKENVKLRLEEEKDLLGQIESDLNKILF-----PEAEVSEKAENEDTES 350
>gi|251793617|ref|YP_003008347.1| recombinase A [Aggregatibacter aphrophilus NJ8700]
gi|422337614|ref|ZP_16418584.1| recA [Aggregatibacter aphrophilus F0387]
gi|247535014|gb|ACS98260.1| protein RecA [Aggregatibacter aphrophilus NJ8700]
gi|353344946|gb|EHB89244.1| recA [Aggregatibacter aphrophilus F0387]
Length = 353
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/353 (54%), Positives = 255/353 (72%), Gaps = 8/353 (2%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
+K AL+ AL QI FGKG+IM LG S + +STGSF LD+ALG GGLP GR+VE
Sbjct: 6 EKQKALEAALGQIEKQFGKGAIMKLGDS-QKLDIEAISTGSFGLDLALGIGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
I+GPE+SGKTTL L VIAEAQ+ G C FIDAEHALDP A +GV + LL++QPD GE
Sbjct: 65 IFGPESSGKTTLTLSVIAEAQKNGKTCAFIDAEHALDPIYASKLGVDVKELLVSQPDNGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L+RSG+VDVV+VDSVAAL PK E++G+MGD+HM +QARLMSQALRKL+ +
Sbjct: 125 QALEICDALVRSGAVDVVIVDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTSQIK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+G+E +G++
Sbjct: 185 NANCLVIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAIKEGDEVVGNE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRG 301
VK+VKNK+APPF+ F++ +G+GIS+ESE+IDL +KHK SKAGA + Y N++ +G
Sbjct: 243 TRVKVVKNKVAPPFRQVDFQILYGEGISKESELIDLGVKHKLISKAGAWYAYQNEKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETVSTISPD 354
K ++L +N + + LR++L+ P++A+T DS E I D
Sbjct: 303 KTNAMKWLKDNPEQAKIIESTLRDELLA---HPESAIT-ADSDNEAQGNIESD 351
>gi|294500865|ref|YP_003564565.1| RecA2 protein [Bacillus megaterium QM B1551]
gi|295706211|ref|YP_003599286.1| recombinase A [Bacillus megaterium DSM 319]
gi|384045283|ref|YP_005493300.1| recombinase A [Bacillus megaterium WSH-002]
gi|25004877|emb|CAD56684.1| RecA2 protein [Bacillus megaterium]
gi|294350802|gb|ADE71131.1| RecA2 protein [Bacillus megaterium QM B1551]
gi|294803870|gb|ADF40936.1| RecA2 protein [Bacillus megaterium DSM 319]
gi|345442974|gb|AEN87991.1| recombinase A [Bacillus megaterium WSH-002]
Length = 345
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/343 (53%), Positives = 254/343 (74%), Gaps = 5/343 (1%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
M+ + AL AL QI FGKGSIM LG T + + + +GS ALDIALG GG P+GRV
Sbjct: 1 MNDRQAALDMALKQIEKQFGKGSIMKLGEQ-TEKRISTIPSGSLALDIALGVGGYPRGRV 59
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
VE+YGPE+SGKTT+ALH IAE Q+QGG FIDAEHALDP A+ +GV + LLL+QPD
Sbjct: 60 VEVYGPESSGKTTVALHAIAEVQQQGGQAAFIDAEHALDPVYAQKLGVNIDELLLSQPDT 119
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + + L+RSG+VD++VVDSVAALVPK E++GEMGD+H+ +QARLMSQALRKLS +
Sbjct: 120 GEQALEIAEALVRSGAVDIIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLSGA 179
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
++ S+TI IFINQ+R K+ FG P E T GG ALKFY+SVRL ++R +K+G + +G
Sbjct: 180 INKSKTIAIFINQIREKVGVM-FGNP-ETTPGGRALKFYSSVRLEVRRAEQLKQGNDIVG 237
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF- 299
++ +K+VKNK+APPF+ A+ ++ +G+GIS+E EI+D+A + K+G+ ++YND
Sbjct: 238 NKTRIKVVKNKVAPPFRAAEVDIMYGEGISKEGEILDIASELDIVQKSGSWYSYNDERLG 297
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDED 342
+G+E KQFL EN +R+E+ ++RE +D ++ + A D+D
Sbjct: 298 QGRENAKQFLKENTDIRQEIAGQVREHHGLD-QDGEPAPEDDD 339
>gi|149928250|ref|ZP_01916494.1| recombinase A [Limnobacter sp. MED105]
gi|149823056|gb|EDM82297.1| recombinase A [Limnobacter sp. MED105]
Length = 359
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 190/329 (57%), Positives = 241/329 (73%), Gaps = 3/329 (0%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVV 61
S+K AL AL QI FGKGSIM G + + VSTGS LDIALG GGLP+GRVV
Sbjct: 11 SEKVKALAAALSQIEKQFGKGSIMRFGENEIIDDIQSVSTGSLGLDIALGIGGLPRGRVV 70
Query: 62 EIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCG 121
EIYGPE+SGKTTL L VIAE Q+ GG C FIDAEHALD A +GV +LL++QPD G
Sbjct: 71 EIYGPESSGKTTLTLQVIAEMQKLGGTCAFIDAEHALDVQYAAKLGVNLPDLLISQPDTG 130
Query: 122 EQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSL 181
EQAL +VD L+RSGSVD+V+VDSVAAL PK E++G+MGD+ +QARLMSQALRKL+ ++
Sbjct: 131 EQALEIVDALVRSGSVDLVIVDSVAALTPKAEIEGDMGDSLPGLQARLMSQALRKLTANI 190
Query: 182 SLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGS 241
+ ++IFINQ+R K+ FG P E T GGNALKFY+SVRL+I+RIG +KKGEE IGS
Sbjct: 191 KRTNCLVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYSSVRLDIRRIGSIKKGEEVIGS 248
Query: 242 QIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-R 300
+ VK+VKNK++PPFK A+F++ +G+G SRE E++DL + H F KAGA ++YN +
Sbjct: 249 ETRVKVVKNKVSPPFKQAEFDILYGQGTSREGEVVDLGVLHGFVDKAGAWYSYNGEKIGQ 308
Query: 301 GKEAFKQFLVENESVREELVIKLREKLVV 329
GK+ + FL N + E+ K+REKL V
Sbjct: 309 GKDNARDFLKANPVMAAEIENKIREKLGV 337
>gi|365898638|ref|ZP_09436583.1| Recombinase A (recA) [Bradyrhizobium sp. STM 3843]
gi|365420549|emb|CCE09125.1| Recombinase A (recA) [Bradyrhizobium sp. STM 3843]
Length = 362
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/345 (54%), Positives = 249/345 (72%), Gaps = 5/345 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGS+M LG++ + +STGS LD+ALG GGLPKGR+VEI
Sbjct: 16 KSKALSAALSQIERQFGKGSVMKLGKNDRSMDIETISTGSLGLDVALGVGGLPKGRIVEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH +AEAQ++GG C FIDAEHALDP A +GV + LL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+VVDSVAALVPK EL+GEMG++ +QARLMSQALRKL+ S++
Sbjct: 136 ALEICDTLVRSGAVDVLVVDSVAALVPKAELEGEMGESLPGLQARLMSQALRKLTASINK 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ +G P E T GGNALKFYASVRL+I+RIG +K+ +E IG+
Sbjct: 196 SNTMVIFINQIRMKIGVM-YGSP-ETTTGGNALKFYASVRLDIRRIGAIKERDEVIGNTT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G+G+S+ EI+DL +K K+GA F+Y+ + +G+
Sbjct: 254 RVKVVKNKLAPPFKQVEFDIMYGEGVSKMGEILDLGVKAGIVEKSGAWFSYDSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK--LVVDHKEPQTAVTDEDSTE 345
E K FL N + ++ +R+ L+ + +A D D E
Sbjct: 314 ENAKSFLKANPDMTAKIETAIRQNSGLIAEQILAGSAERDADGEE 358
>gi|323483876|ref|ZP_08089253.1| recA [Clostridium symbiosum WAL-14163]
gi|323402830|gb|EGA95151.1| recA [Clostridium symbiosum WAL-14163]
Length = 364
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/321 (56%), Positives = 243/321 (75%), Gaps = 3/321 (0%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL AL QI ++GKGS+M LG S ++ V TGS +LDIALG GG+PKGR+VE+YGP
Sbjct: 9 ALDAALTQIEKAYGKGSVMKLGDSGANMNIETVPTGSLSLDIALGLGGVPKGRIVEVYGP 68
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTT+ALH++AE Q++GG FIDAEHALDP A IGV +NL ++QPD GEQAL
Sbjct: 69 ESSGKTTVALHMVAEVQKRGGIAGFIDAEHALDPVYARNIGVDIDNLYISQPDNGEQALE 128
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ +T++RSG+VD+V+VDSVAALVPK E+DGEMGD+H+ +QARLMSQALRKL+ +S S
Sbjct: 129 ITETMVRSGAVDIVIVDSVAALVPKAEIDGEMGDSHVGLQARLMSQALRKLTAVISKSNC 188
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
+IFINQ+R K+ FG P E T GG ALKFY+SVRL+++RI +K+G E IG+++ VK
Sbjct: 189 TVIFINQLREKVGVM-FGNP-ETTTGGRALKFYSSVRLDVRRIETLKQGGEMIGNRVRVK 246
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGKEAF 305
+VKNK+APPFK A+F++ FGKGIS+E +I+DLA K K+GA + YN +G+E
Sbjct: 247 VVKNKIAPPFKEAEFDIMFGKGISKEGDILDLAAKEDIVEKSGAWYAYNGSKIGQGRENA 306
Query: 306 KQFLVENESVREELVIKLREK 326
K FL+ N+ + E+ K+R+K
Sbjct: 307 KNFLLANQELCAEIETKVRQK 327
>gi|148256739|ref|YP_001241324.1| recombinase A [Bradyrhizobium sp. BTAi1]
gi|146408912|gb|ABQ37418.1| RecA protein [Bradyrhizobium sp. BTAi1]
Length = 362
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 191/345 (55%), Positives = 247/345 (71%), Gaps = 5/345 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGS+M LG++ V VSTGS LDIALG GGLPKGRV+EI
Sbjct: 16 KSKALSAALSQIERQFGKGSVMKLGKNDRSMDVETVSTGSLGLDIALGIGGLPKGRVIEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH +AEAQ++GG C FIDAEHALDP A +GV + LL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+VVDSVAALVPK EL+GEMG++ +QARLMSQALRKL+ S++
Sbjct: 136 ALEICDTLVRSGAVDVLVVDSVAALVPKAELEGEMGESLPGLQARLMSQALRKLTASINK 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ +G P E T GGNALKFYAS+RL+I+RIG +K+ +E IG+
Sbjct: 196 SHTMVIFINQIRMKIGVM-YGSP-ETTTGGNALKFYASIRLDIRRIGAIKERDEVIGNTT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G+G+S+ EI+DL +K K+GA F+Y+ + +G+
Sbjct: 254 RVKVVKNKLAPPFKQVEFDIMYGEGVSKMGEILDLGVKAGIVEKSGAWFSYDSQRLGQGR 313
Query: 303 EAFKQFLVENE--SVREELVIKLREKLVVDHKEPQTAVTDEDSTE 345
E K FL N + + E I+ L+ + A D D E
Sbjct: 314 ENSKSFLKANPDMTAKIEAAIRQNSGLIAEQILAGNAERDADGEE 358
>gi|386774383|ref|ZP_10096761.1| recombination protein RecA [Brachybacterium paraconglomeratum LC44]
Length = 372
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 194/342 (56%), Positives = 247/342 (72%), Gaps = 9/342 (2%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
+L AL QI FGKGSIM LG P V V+ TGS ALD ALG GGLP+GR+VEIYGP
Sbjct: 18 SLDNALAQIDRQFGKGSIMRLGDDTRP-PVEVIPTGSVALDAALGVGGLPRGRIVEIYGP 76
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTT+ALH +A AQR GG FIDAEHALDP A+ +GV T+ LL++QPD GEQAL
Sbjct: 77 ESSGKTTVALHAVANAQRNGGIAAFIDAEHALDPEYAKKLGVDTDALLVSQPDTGEQALE 136
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ D LIRSG++D+VVVDSVAALVPK E++GEMGD+H+ +QARLMSQALRKL+ +LS S T
Sbjct: 137 ITDMLIRSGALDIVVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTGALSSSGT 196
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
IFINQ+R K+ F FG P E T GG ALKFYASVR++I+RI +K G + +G++ VK
Sbjct: 197 TAIFINQLREKIGVF-FGSP-ETTTGGKALKFYASVRMDIRRIETLKSGSDAVGNRTRVK 254
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRGKEAF 305
+VKNK+APPFK A+F++ +G+GISRE +IDL ++H K+GA FTY D+ +GKE
Sbjct: 255 VVKNKMAPPFKQAEFDILYGEGISREGGLIDLGVEHGVVRKSGAWFTYEGDQLGQGKENS 314
Query: 306 KQFLVENESVREELVIKLREKLVV-----DHKEPQTAVTDED 342
+QFL +N + E+ K+ L V + P+ V ED
Sbjct: 315 RQFLKDNPDLAAEIEEKILRTLGVGKYAAEQSAPEAEVGAED 356
>gi|304391434|ref|ZP_07373376.1| protein RecA [Ahrensia sp. R2A130]
gi|303295663|gb|EFL90021.1| protein RecA [Ahrensia sp. R2A130]
Length = 368
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 187/352 (53%), Positives = 252/352 (71%), Gaps = 5/352 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI +FGKGSIM LG + + +STG LDIALG GGLPKGR+VEI
Sbjct: 16 KSKALEAALGQIERAFGKGSIMRLGANEQAVEIETISTGCIGLDIALGVGGLPKGRIVEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ALH +AEAQ++GG C F+DAEHALDP A+ +GV ENLL++QPD GEQ
Sbjct: 76 YGPESSGKTTMALHTVAEAQKEGGICAFVDAEHALDPVYAKKLGVNLENLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+ D++V+DSVAAL P+ E++GEMG + +QARLMSQALRKL+ S+S
Sbjct: 136 ALEIADTLVRSGACDILVIDSVAALTPRAEIEGEMGASLPGLQARLMSQALRKLTASISK 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K +E +G+Q
Sbjct: 196 SNTMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAIKDRDEIVGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
+K+VKNKLAPPFK +F++ +G+G+S+ E+IDL + K+G+ F+Y+ + +G+
Sbjct: 254 RIKVVKNKLAPPFKQVEFDIMYGEGVSKMGELIDLGVTAGIVEKSGSWFSYDSQRLGQGR 313
Query: 303 EAFKQFLVENESVRE--ELVIKLREKLVVDHKEPQTAVTDEDSTEETVSTIS 352
E KQFL +N V E E I+ L+ + + DED T+ + I+
Sbjct: 314 ENAKQFLRDNPEVAETIEKAIRTNAGLIGEKLLDEPTGKDEDGTDPELGEIA 365
>gi|294677288|ref|YP_003577903.1| RecA protein [Rhodobacter capsulatus SB 1003]
gi|294476108|gb|ADE85496.1| RecA protein [Rhodobacter capsulatus SB 1003]
Length = 355
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/346 (55%), Positives = 249/346 (71%), Gaps = 6/346 (1%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVV 61
+ K AL+ AL QI FGKGSIM LG P + STGS LDIALG GGLPKGR+V
Sbjct: 15 ADKQKALESALAQIERQFGKGSIMKLGGDTPPPEIEATSTGSLGLDIALGIGGLPKGRIV 74
Query: 62 EIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCG 121
EIYGPE+SGKTTL LH IAE Q++GG C F+DAEHALDP A+ +GV E+LL++QPD G
Sbjct: 75 EIYGPESSGKTTLTLHCIAEEQKKGGVCAFVDAEHALDPYYAKKLGVSLEDLLISQPDTG 134
Query: 122 EQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSL 181
EQAL +VDTL+RSG+V +VVVDSVAAL PK E++G+MGDA + QARLMSQA+RKL+ S+
Sbjct: 135 EQALEIVDTLVRSGAVSLVVVDSVAALTPKAEIEGDMGDATVGAQARLMSQAMRKLTASI 194
Query: 182 SLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGS 241
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+R G +K +E IG+
Sbjct: 195 GRSNCMVIFINQIRMKIGVM-FGSP-ETTSGGNALKFYASVRLDIRRTGAIKDRDEVIGN 252
Query: 242 QIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYND-RNFR 300
Q VK+VKNK+APPF+ +F++ +G+GIS+ E++DL +K +K+GA ++Y D R +
Sbjct: 253 QTRVKVVKNKVAPPFREVEFDILYGEGISKVGELVDLGVKAGVVAKSGAWYSYGDERIGQ 312
Query: 301 GKEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEE 346
G+E KQFL +N + E+ K+R ++ TA ED TEE
Sbjct: 313 GRENAKQFLRDNPDIAYEIEDKIRASHGLEFGVDPTA---EDLTEE 355
>gi|374576548|ref|ZP_09649644.1| protein RecA [Bradyrhizobium sp. WSM471]
gi|386401717|ref|ZP_10086495.1| protein RecA [Bradyrhizobium sp. WSM1253]
gi|374424869|gb|EHR04402.1| protein RecA [Bradyrhizobium sp. WSM471]
gi|385742343|gb|EIG62539.1| protein RecA [Bradyrhizobium sp. WSM1253]
Length = 362
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 185/323 (57%), Positives = 240/323 (74%), Gaps = 3/323 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGS+M LG++ V VS+GS LDIALG GGLPKGRVVEI
Sbjct: 16 KSKALAAALSQIERQFGKGSVMKLGKNDRSMDVEAVSSGSLGLDIALGIGGLPKGRVVEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH +AE Q++GG C FIDAEHALDP A +GV + LL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALHTVAEGQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+V+DSVAALVPK EL+GEMGDA +QARLMSQALRKL+ S++
Sbjct: 136 ALEICDTLVRSGAVDVLVIDSVAALVPKAELEGEMGDALPGLQARLMSQALRKLTASINK 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ +G P E T GGNALKFYASVRL+I+RIG +K+ +E +G+
Sbjct: 196 SNTMVIFINQIRMKIGVM-YGSP-ETTTGGNALKFYASVRLDIRRIGAIKERDEVVGNTT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G+G+S+ EI+DL +K K+GA F+Y+ + +G+
Sbjct: 254 RVKVVKNKLAPPFKQVEFDIMYGEGVSKMGEILDLGVKAGIVEKSGAWFSYDSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLRE 325
E K FL N + ++ +R+
Sbjct: 314 ENSKAFLKANPDITAKIETSIRQ 336
>gi|392552332|ref|ZP_10299469.1| recombinase A [Pseudoalteromonas spongiae UST010723-006]
Length = 349
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 189/327 (57%), Positives = 239/327 (73%), Gaps = 4/327 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGSIM LG S V +STGS +DIALG GGLP GR+VEI
Sbjct: 5 KQKALTAALSQIERQFGKGSIMKLGDS-QALDVEAISTGSLGIDIALGIGGLPTGRIVEI 63
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIA AQ++G C F+DAEHALDP AE +GV + LL++QPD GEQ
Sbjct: 64 YGPESSGKTTLTLQVIAAAQKEGKTCAFVDAEHALDPVYAEKLGVNVDELLVSQPDTGEQ 123
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RSG+VDVV+VDSVAAL PK E++G+MGD H+ +QARLMSQALRKL+ ++
Sbjct: 124 ALEICDMLVRSGAVDVVIVDSVAALTPKAEIEGDMGDTHVGLQARLMSQALRKLTANIKR 183
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T+ IFINQ+R K+ FG P E T GGNALKFY+SVR++I+R G VK+G+E +G++
Sbjct: 184 SNTLCIFINQIRMKIGVM-FGNP-ETTTGGNALKFYSSVRIDIRRTGSVKEGDEIVGNET 241
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VKIVKNK+APPFK A+F + +G+GIS+E E+IDL +KH KAGA F+Y +GK
Sbjct: 242 RVKIVKNKVAPPFKQAEFIIMYGQGISKEGELIDLGVKHNLVDKAGAWFSYKGSKIGQGK 301
Query: 303 EAFKQFLVENESVREELVIKLREKLVV 329
+FL EN + E+ KLRE L++
Sbjct: 302 ANSIKFLKENVEIANEIEQKLREMLLL 328
>gi|383389163|gb|AFH09559.1| recombinase A [Aeromonas bestiarum]
gi|383389165|gb|AFH09560.1| recombinase A [Aeromonas bestiarum]
Length = 353
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 190/346 (54%), Positives = 250/346 (72%), Gaps = 7/346 (2%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGSIM LG S T + +STGS +LD+ALG GGLP GR+VEI
Sbjct: 5 KQKALAAALGQIEKQFGKGSIMRLGDSKT-MDIEAISTGSLSLDVALGIGGLPCGRIVEI 63
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIAEAQ++G C FIDAEHALDP A +GV ++LL++QPD GEQ
Sbjct: 64 YGPESSGKTTLTLQVIAEAQKKGKVCAFIDAEHALDPIYAAKLGVNVDDLLISQPDTGEQ 123
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RS +VDV++VDSVAAL PK E++GEMGD+H+ +QARLMSQALRKL+ ++
Sbjct: 124 ALEICDMLVRSNAVDVIIVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKN 183
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
+ + IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+G+E +G++
Sbjct: 184 ANCLCIFINQIRIKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAIKEGDEVVGNET 241
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK A+F++ +G GIS+E E++DL +KHK KAGA ++YN +GK
Sbjct: 242 RVKVVKNKVAPPFKQAEFQIFYGVGISKEGELVDLGVKHKLIDKAGAWYSYNGEKIGQGK 301
Query: 303 EAFKQFLVENESVREELVIKLREKLV---VDHKEPQTAVTDEDSTE 345
+ EN+++ E+ +LRE L+ ++P A DE E
Sbjct: 302 ANVMKLFSENKAMAAEVEARLRELLLSGDAPAEKPVAADADELEAE 347
>gi|117617987|ref|YP_858164.1| recombinase A [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
gi|166199594|sp|A0KPG3.1|RECA_AERHH RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|117559394|gb|ABK36342.1| recA protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
gi|383389201|gb|AFH09578.1| recombinase A [Aeromonas hydrophila subsp. hydrophila]
gi|383389203|gb|AFH09579.1| recombinase A [Aeromonas hydrophila]
gi|383389205|gb|AFH09580.1| recombinase A [Aeromonas hydrophila]
gi|383389207|gb|AFH09581.1| recombinase A [Aeromonas hydrophila]
gi|383389209|gb|AFH09582.1| recombinase A [Aeromonas hydrophila]
gi|383389211|gb|AFH09583.1| recombinase A [Aeromonas hydrophila]
gi|383389213|gb|AFH09584.1| recombinase A [Aeromonas hydrophila]
gi|383389215|gb|AFH09585.1| recombinase A [Aeromonas hydrophila]
gi|383389217|gb|AFH09586.1| recombinase A [Aeromonas hydrophila]
gi|383389219|gb|AFH09587.1| recombinase A [Aeromonas hydrophila]
gi|383389221|gb|AFH09588.1| recombinase A [Aeromonas hydrophila]
gi|383389223|gb|AFH09589.1| recombinase A [Aeromonas hydrophila]
gi|383389225|gb|AFH09590.1| recombinase A [Aeromonas hydrophila]
gi|383389227|gb|AFH09591.1| recombinase A [Aeromonas hydrophila]
gi|383389229|gb|AFH09592.1| recombinase A [Aeromonas hydrophila]
gi|383389233|gb|AFH09594.1| recombinase A [Aeromonas hydrophila]
gi|383389235|gb|AFH09595.1| recombinase A [Aeromonas hydrophila]
gi|383389237|gb|AFH09596.1| recombinase A [Aeromonas hydrophila]
gi|383389239|gb|AFH09597.1| recombinase A [Aeromonas hydrophila]
gi|383389247|gb|AFH09601.1| recombinase A [Aeromonas hydrophila]
gi|383389249|gb|AFH09602.1| recombinase A [Aeromonas hydrophila]
gi|383389251|gb|AFH09603.1| recombinase A [Aeromonas hydrophila]
Length = 354
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/326 (56%), Positives = 243/326 (74%), Gaps = 4/326 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGSIM LG S T + +STGS +LD+ALG GGLP GR+VEI
Sbjct: 5 KQKALAAALGQIEKQFGKGSIMRLGDSKT-MDIEAISTGSLSLDVALGIGGLPCGRIVEI 63
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIAEAQ++G C F+DAEHALDP A +GV ++LL++QPD GEQ
Sbjct: 64 YGPESSGKTTLTLQVIAEAQKKGKTCAFVDAEHALDPIYAAKLGVNVDDLLISQPDTGEQ 123
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RS +VDV++VDSVAAL PK E++GEMGD+H+ +QARLMSQALRKL+ ++
Sbjct: 124 ALEICDMLVRSNAVDVIIVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKN 183
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
+ + IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+G+E +G++
Sbjct: 184 ANCLCIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAIKEGDEVVGNET 241
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK A+F++ +G GIS+E E++DL +KHK KAGA ++YN +GK
Sbjct: 242 RVKVVKNKVAPPFKQAEFQIFYGAGISKEGELVDLGVKHKLIDKAGAWYSYNGEKIGQGK 301
Query: 303 EAFKQFLVENESVREELVIKLREKLV 328
+ EN+++ E+ +LRE L+
Sbjct: 302 ANVMKLFAENKAMAGEVEARLRELLL 327
>gi|90020935|ref|YP_526762.1| recombinase A [Saccharophagus degradans 2-40]
gi|123277374|sp|Q21L79.1|RECA_SACD2 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|89950535|gb|ABD80550.1| recA protein [Saccharophagus degradans 2-40]
Length = 348
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 187/332 (56%), Positives = 248/332 (74%), Gaps = 4/332 (1%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVV 61
+ K AL+ AL QI FGKG++M LG + +P +STGS LD+ALG GGLPKGR+V
Sbjct: 3 ASKSKALEAALSQIDRQFGKGTVMRLGDKGREK-MPAISTGSLGLDVALGIGGLPKGRIV 61
Query: 62 EIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCG 121
EIYGPE+SGKTTL L VIAEAQRQGG C F+DAEHALDP AE +GV ++L+++QPD G
Sbjct: 62 EIYGPESSGKTTLTLQVIAEAQRQGGTCAFVDAEHALDPVYAEKLGVNVDDLIISQPDNG 121
Query: 122 EQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSL 181
EQAL + D L+RSG+VDV+VVDSVAAL PK E++G+MGD H+ +QARLMSQALRK++ ++
Sbjct: 122 EQALEVADMLVRSGAVDVLVVDSVAALTPKAEIEGDMGDHHVGLQARLMSQALRKITGNI 181
Query: 182 SLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGS 241
+ + IFINQ+R K+ FG P E T GGNALKFY+SVRL+I+RIG VK+G+E +GS
Sbjct: 182 KNANCLAIFINQIRMKIGVM-FGNP-ETTTGGNALKFYSSVRLDIRRIGSVKEGDEVVGS 239
Query: 242 QIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFR 300
VK+VKNK+APPFK A+F++ +G+GI+R EI+D +K KAGA ++YN D+ +
Sbjct: 240 DTRVKVVKNKVAPPFKQAEFQILYGQGINRLGEIVDFGVKLGLIDKAGAWYSYNGDKIGQ 299
Query: 301 GKEAFKQFLVENESVREELVIKLREKLVVDHK 332
GK Q+L +N+ V E L K++ +L+ D K
Sbjct: 300 GKANAMQYLRDNKEVAEFLEQKIKAELLGDIK 331
>gi|332140353|ref|YP_004426091.1| recombinase A [Alteromonas macleodii str. 'Deep ecotype']
gi|410860565|ref|YP_006975799.1| recombinase A [Alteromonas macleodii AltDE1]
gi|238693255|sp|B4RVU1.1|RECA_ALTMD RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|327550375|gb|AEA97093.1| recombinase A [Alteromonas macleodii str. 'Deep ecotype']
gi|410817827|gb|AFV84444.1| recombinase A [Alteromonas macleodii AltDE1]
Length = 348
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 185/327 (56%), Positives = 244/327 (74%), Gaps = 4/327 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL A+ QI FGKG+IM LG + + +STGS +DIALG GGLP GRVVEI
Sbjct: 5 KSKALTAAVGQIEKQFGKGAIMRLGDN-QAMDIEAISTGSLTIDIALGIGGLPCGRVVEI 63
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIAEAQ+ G C F+DAEHALDP AE +GV + LL++QPD GEQ
Sbjct: 64 YGPESSGKTTLTLQVIAEAQKNGKTCAFVDAEHALDPVYAEKLGVNIDELLVSQPDTGEQ 123
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RSG+VDVV+VDSVAAL PK E++G+MGD+H+ +QARLMSQALRKL+ ++
Sbjct: 124 ALEICDMLVRSGAVDVVIVDSVAALTPKAEIEGDMGDSHVGLQARLMSQALRKLTANIKR 183
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T+ IFINQ+R K+ FG P E T GGNALKFY+SVRL+I+RIG VK+G+E +G++
Sbjct: 184 SNTLCIFINQIRMKIGVM-FGNP-ETTTGGNALKFYSSVRLDIRRIGAVKEGDEVVGNET 241
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGK 302
VK+VKNK+APPFK A+F + +G+GIS+E+E+IDL +K K KAGA ++Y DR +GK
Sbjct: 242 RVKVVKNKVAPPFKQAEFMIRYGEGISKEAELIDLGVKQKLVDKAGAWYSYKGDRIGQGK 301
Query: 303 EAFKQFLVENESVREELVIKLREKLVV 329
++L E+ E+ K+R++L++
Sbjct: 302 ANVMKYLKEHPETANEIETKIRQELLL 328
>gi|307132213|ref|YP_003884229.1| DNA strand exchange and recombination protein [Dickeya dadantii
3937]
gi|306529742|gb|ADM99672.1| DNA strand exchange and recombination protein with protease and
nuclease activity [Dickeya dadantii 3937]
Length = 358
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 197/355 (55%), Positives = 250/355 (70%), Gaps = 6/355 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGVGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR G C FIDAEHALDP A+ +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQRGGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV++VDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALARSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+GEE +GS+
Sbjct: 185 QSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGSIKEGEEVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +K K KAGA ++YN D+ +G
Sbjct: 243 TRVKVVKNKVAAPFKQAEFQILYGEGINTYGELVDLGVKFKMIEKAGAWYSYNGDKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDE--DSTEETVSTISPD 354
K FL EN ++ EL KLRE L+ E V+ E + EE ++ D
Sbjct: 303 KANACNFLKENPAISAELDKKLREMLLHKDNEAVPNVSGERAEYDEEAAGELNDD 357
>gi|425075302|ref|ZP_18478405.1| protein recA [Klebsiella pneumoniae subsp. pneumoniae WGLW1]
gi|425085938|ref|ZP_18489031.1| protein recA [Klebsiella pneumoniae subsp. pneumoniae WGLW3]
gi|405595505|gb|EKB68895.1| protein recA [Klebsiella pneumoniae subsp. pneumoniae WGLW1]
gi|405606447|gb|EKB79439.1| protein recA [Klebsiella pneumoniae subsp. pneumoniae WGLW3]
Length = 352
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 194/346 (56%), Positives = 246/346 (71%), Gaps = 4/346 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG T V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALTAALGQIEKQFGKGSIMRLGEDRT-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV+VVDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+G+ +GS+
Sbjct: 185 QSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKEGDNVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +K K KAGA ++YN D+ +G
Sbjct: 243 TRVKVVKNKIAAPFKQAEFQILYGEGINFYGELVDLGVKEKLIEKAGAWYSYNGDKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEET 347
K +L EN + +E+ K+RE L+ + V D + EET
Sbjct: 303 KANAITWLKENPAAAKEIEKKVRELLLNNQDAKPDFVVDGNDAEET 348
>gi|420692778|ref|ZP_15175884.1| protein RecA [Yersinia pestis PY-52]
gi|391566573|gb|EIS14550.1| protein RecA [Yersinia pestis PY-52]
Length = 356
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 195/350 (55%), Positives = 250/350 (71%), Gaps = 8/350 (2%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A+ +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV++VDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK G+ +GS+
Sbjct: 185 NANTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKDGDVVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +KHK KAGA ++YN D+ +G
Sbjct: 243 TRVKVVKNKIAAPFKQAEFQILYGEGININGELVDLGVKHKLIEKAGAWYSYNGDKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVV--DHKEPQTAVTDE--DSTEET 347
K +L E ++ EL KLRE L+ + ++P A T E D +ET
Sbjct: 303 KANASNYLKETPAIAAELDKKLREMLLNGGNGEQPVAAATAEFADGADET 352
>gi|456354260|dbj|BAM88705.1| recombinase A [Agromonas oligotrophica S58]
Length = 349
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 187/323 (57%), Positives = 241/323 (74%), Gaps = 3/323 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGS+M LG++ V VSTGS LDIALG GGLPKGRVVEI
Sbjct: 3 KSKALSAALSQIERQFGKGSVMRLGKNDRSMDVETVSTGSLGLDIALGIGGLPKGRVVEI 62
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH +AEAQ++GG C FIDAEHALDP A +GV + LL++QPD GEQ
Sbjct: 63 YGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTGEQ 122
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+VVDSVAALVPK EL+GEMG++ +QARLMSQALRKL+ S++
Sbjct: 123 ALEICDTLVRSGAVDVLVVDSVAALVPKAELEGEMGESLPGLQARLMSQALRKLTASINK 182
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ +G P E T GGNALKFYASVRL+I+RIG +K+ +E IG+
Sbjct: 183 SHTMVIFINQIRMKIGVM-YGSP-ETTTGGNALKFYASVRLDIRRIGAIKERDEVIGNST 240
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G+G+S+ EI+DL +K K+GA F+Y+ + +G+
Sbjct: 241 RVKVVKNKLAPPFKQVEFDIMYGEGVSKMGEILDLGVKAGIVEKSGAWFSYDSQRLGQGR 300
Query: 303 EAFKQFLVENESVREELVIKLRE 325
E K FL N + ++ +R+
Sbjct: 301 ENSKSFLKANPDMTAKIEAAIRQ 323
>gi|323692880|ref|ZP_08107105.1| recA [Clostridium symbiosum WAL-14673]
gi|355622149|ref|ZP_09046545.1| RecA protein [Clostridium sp. 7_3_54FAA]
gi|323503055|gb|EGB18892.1| recA [Clostridium symbiosum WAL-14673]
gi|354823121|gb|EHF07460.1| RecA protein [Clostridium sp. 7_3_54FAA]
Length = 364
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/321 (56%), Positives = 243/321 (75%), Gaps = 3/321 (0%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL AL QI ++GKGS+M LG S ++ V TGS +LDIALG GG+PKGR+VE+YGP
Sbjct: 9 ALDAALTQIEKAYGKGSVMKLGDSGANMNIETVPTGSLSLDIALGLGGVPKGRIVEVYGP 68
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTT+ALH++AE Q++GG FIDAEHALDP A IGV +NL ++QPD GEQAL
Sbjct: 69 ESSGKTTVALHMVAEVQKRGGIAGFIDAEHALDPVYARNIGVDIDNLYISQPDNGEQALE 128
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ +T++RSG+VD+V+VDSVAALVPK E+DGEMGD+H+ +QARLMSQALRKL+ +S S
Sbjct: 129 ITETMVRSGAVDIVIVDSVAALVPKAEIDGEMGDSHVGLQARLMSQALRKLTAVISKSNC 188
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
+IFINQ+R K+ FG P E T GG ALKFY+SVRL+++RI +K+G E IG+++ VK
Sbjct: 189 TVIFINQLREKVGVM-FGNP-ETTTGGRALKFYSSVRLDVRRIETLKQGGEMIGNRVRVK 246
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGKEAF 305
+VKNK+APPFK A+F++ FGKGIS+E +I+DLA K K+GA + YN +G+E
Sbjct: 247 VVKNKIAPPFKEAEFDIMFGKGISKEGDILDLAAKEDIVEKSGAWYAYNGSKIGQGRENA 306
Query: 306 KQFLVENESVREELVIKLREK 326
K FL+ N+ + E+ K+R+K
Sbjct: 307 KNFLLANQELCAEIETKVRQK 327
>gi|50084563|ref|YP_046073.1| recombinase A [Acinetobacter sp. ADP1]
gi|1172879|sp|P42438.1|RECA_ACIAD RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|440089|gb|AAC27115.1| RecA [Acinetobacter sp. ADP1]
gi|49530539|emb|CAG68251.1| DNA strand exchange and recombination protein with protease and
nuclease activity [Acinetobacter sp. ADP1]
Length = 349
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/344 (54%), Positives = 247/344 (71%), Gaps = 5/344 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K ALQ AL QI FGK ++M LG + T + V VSTGS LDIALG GGLPKGR+VE
Sbjct: 4 NKSKALQAALSQIEKQFGKNTVMRLGDN-TVQAVEAVSTGSLTLDIALGIGGLPKGRIVE 62
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTT+ L IA+ Q+ GG C FIDAEHALDP A +GV +NLL++QPD GE
Sbjct: 63 IYGPESSGKTTMTLQAIAQCQKAGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDHGE 122
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L+RSG++D++VVDSVAAL PK E++GEMGD+HM +QARLMSQALRK++ +
Sbjct: 123 QALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAK 182
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+G+E IGS+
Sbjct: 183 RSNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGQVKEGDEIIGSE 240
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK+VKNK+APPF+ A F++ +GKG+++ E++DLA++ KAGA ++Y +G
Sbjct: 241 TKVKVVKNKMAPPFREAIFQILYGKGVNQLGELVDLAVQQNIVQKAGAWYSYQGNKIGQG 300
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTE 345
K ++L EN + E+ +RE+L+ + QTA DE E
Sbjct: 301 KNNVIRYLEENPQISTEIEAVIREQLLTKASD-QTAAHDETEEE 343
>gi|425092934|ref|ZP_18496018.1| protein recA [Klebsiella pneumoniae subsp. pneumoniae WGLW5]
gi|405611276|gb|EKB84044.1| protein recA [Klebsiella pneumoniae subsp. pneumoniae WGLW5]
Length = 352
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 194/346 (56%), Positives = 246/346 (71%), Gaps = 4/346 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG T V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRT-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV+VVDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+G+ +GS+
Sbjct: 185 QSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKEGDNVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +K K KAGA ++YN D+ +G
Sbjct: 243 TRVKVVKNKIAAPFKQAEFQILYGEGINFYGELVDLGVKEKLIEKAGAWYSYNGDKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEET 347
K +L EN + +E+ K+RE L+ + V D + EET
Sbjct: 303 KANAITWLKENPAAAKEIEKKVRELLLNNQDTKPDFVVDGNDAEET 348
>gi|383389253|gb|AFH09604.1| recombinase A [Aeromonas hydrophila]
Length = 354
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/326 (56%), Positives = 243/326 (74%), Gaps = 4/326 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGSIM LG S T + +STGS +LD+ALG GGLP GR+VEI
Sbjct: 5 KQKALAAALGQIEKQFGKGSIMRLGDSKT-MDIEAISTGSLSLDVALGIGGLPCGRIVEI 63
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIAEAQ++G C F+DAEHALDP A +GV ++LL++QPD GEQ
Sbjct: 64 YGPESSGKTTLTLQVIAEAQKKGKTCAFVDAEHALDPIYAAKLGVNVDDLLISQPDTGEQ 123
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RS +VDV++VDSVAAL PK E++GEMGD+H+ +QARLMSQALRKL+ ++
Sbjct: 124 ALEICDMLVRSNAVDVIIVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKN 183
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
+ + IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+G+E +G++
Sbjct: 184 ANCLCIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAIKEGDEVVGNET 241
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK A+F++ +G GIS+E E++DL +KHK KAGA ++YN +GK
Sbjct: 242 RVKVVKNKVAPPFKQAEFQIFYGAGISKEGELVDLGVKHKLIDKAGAWYSYNGEKIGQGK 301
Query: 303 EAFKQFLVENESVREELVIKLREKLV 328
+ EN+++ E+ +LRE L+
Sbjct: 302 ANVMKLFAENKAMAGEVEARLRELLL 327
>gi|359434263|ref|ZP_09224540.1| recombination protein RecA [Pseudoalteromonas sp. BSi20652]
gi|357919078|dbj|GAA60789.1| recombination protein RecA [Pseudoalteromonas sp. BSi20652]
Length = 347
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 187/327 (57%), Positives = 245/327 (74%), Gaps = 4/327 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGSIM LG + ++ VSTGS +DIALG GGLP GR+VE+
Sbjct: 5 KQKALDAALSQIERQFGKGSIMKLGDN-KALNIESVSTGSLGIDIALGIGGLPMGRIVEV 63
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIAEAQ++G C FIDAEHALDP A+ +GV + L ++QPD GEQ
Sbjct: 64 YGPESSGKTTLTLQVIAEAQKEGKTCAFIDAEHALDPVYAQKLGVNIDELFVSQPDTGEQ 123
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RS +VDVV++DSVAAL PK E++G+MGD+HM +QARLMSQALRKL+ ++
Sbjct: 124 ALEICDMLVRSSAVDVVIIDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTGNIKR 183
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T+ IFINQ+R K+ FG P E T GGNALKFYASVR++I+RIG VK+G+E +G++
Sbjct: 184 SNTLCIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRIDIRRIGSVKEGDEVVGNET 241
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRGK 302
VKIVKNK+APPFK A+F + +G+GIS++ E+IDL +KHK KAGA ++Y ++ +GK
Sbjct: 242 RVKIVKNKVAPPFKQAEFIIMYGEGISKQGELIDLGVKHKIVEKAGAWYSYCGNKVGQGK 301
Query: 303 EAFKQFLVENESVREELVIKLREKLVV 329
+FL EN + +E+ KLRE L++
Sbjct: 302 SNSIKFLKENPEIADEIEGKLREMLLL 328
>gi|387888225|ref|YP_006318523.1| DNA strand exchange and recombination protein [Escherichia blattae
DSM 4481]
gi|414595436|ref|ZP_11445057.1| RecA protein [Escherichia blattae NBRC 105725]
gi|386923058|gb|AFJ46012.1| DNA strand exchange and recombination protein with protease and
nuclease activity [Escherichia blattae DSM 4481]
gi|403193600|dbj|GAB82709.1| RecA protein [Escherichia blattae NBRC 105725]
Length = 354
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 194/346 (56%), Positives = 243/346 (70%), Gaps = 6/346 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG T V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRT-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VI AQR+G C FIDAEHALDP A +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIGAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV+VVDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+G+ +GS+
Sbjct: 185 QSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKEGDNVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +KHK KAGA ++YN +G
Sbjct: 243 TRVKVVKNKIAAPFKQAEFQIMYGEGINFYGELVDLGVKHKLIEKAGAWYSYNGEKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEET 347
K FL EN+ + E+ KLRE L+ H + T D+ E
Sbjct: 303 KANASNFLKENKPMATEIEKKLREMLL--HNQDSTPDFQVDAYSEN 346
>gi|383389265|gb|AFH09610.1| recombinase A [Aeromonas hydrophila subsp. dhakensis]
gi|383389269|gb|AFH09612.1| recombinase A [Aeromonas hydrophila subsp. dhakensis]
gi|383389275|gb|AFH09615.1| recombinase A [Aeromonas hydrophila subsp. dhakensis]
gi|383389277|gb|AFH09616.1| recombinase A [Aeromonas hydrophila subsp. dhakensis]
Length = 354
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 190/347 (54%), Positives = 249/347 (71%), Gaps = 8/347 (2%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGSIM LG S T + +STGS +LD+ALG GGLP GR+VEI
Sbjct: 5 KQKALAAALGQIEKQFGKGSIMRLGDSKT-MDIEAISTGSLSLDVALGIGGLPCGRIVEI 63
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIAEAQ++G C F+DAEHALDP A +GV ++LL++QPD GEQ
Sbjct: 64 YGPESSGKTTLTLQVIAEAQKKGKTCAFVDAEHALDPIYAAKLGVNVDDLLISQPDTGEQ 123
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RS +VDV++VDSVAAL PK E++GEMGD+H+ +QARLMSQALRKL+ ++
Sbjct: 124 ALEICDMLVRSNAVDVIIVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKN 183
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
+ + IFINQ+R K+ FG P E T GGNALKFYASVRL+I+R G +K+G+E +G++
Sbjct: 184 ANCLCIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRTGAIKEGDEVVGNET 241
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK A+F++ +G GIS+E E++DL +KHK KAGA ++YN +GK
Sbjct: 242 RVKVVKNKVAPPFKQAEFQIFYGAGISKEGELVDLGVKHKLIDKAGAWYSYNGEKIGQGK 301
Query: 303 EAFKQFLVENESVREELVIKLREKL----VVDHKEPQTAVTDEDSTE 345
+ EN+++ E+ KLRE L V ++P A DE E
Sbjct: 302 ANVMKLFAENKALAGEVEAKLRELLLSGAVPVEEKPSAAEYDEFEAE 348
>gi|225375593|ref|ZP_03752814.1| hypothetical protein ROSEINA2194_01218 [Roseburia inulinivorans DSM
16841]
gi|225212572|gb|EEG94926.1| hypothetical protein ROSEINA2194_01218 [Roseburia inulinivorans DSM
16841]
Length = 350
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 187/339 (55%), Positives = 252/339 (74%), Gaps = 5/339 (1%)
Query: 1 MSKKDL--ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKG 58
M+++D AL A+ QI +GKGSIM LG + +V + TGS +LDIALG GGLPKG
Sbjct: 1 MAREDKLKALDAAISQIEKQYGKGSIMKLGDNSAHMNVETIPTGSLSLDIALGLGGLPKG 60
Query: 59 RVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQP 118
R++EIYGPE+SGKTT+ALH +AE Q++GG FIDAEHALDP+ A+ IGV + L ++QP
Sbjct: 61 RIIEIYGPESSGKTTVALHAVAEVQKRGGIAGFIDAEHALDPAYAKNIGVNIDELYISQP 120
Query: 119 DCGEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLS 178
DCGEQAL + +T++RSG+VD+V+VDSVAALVPK E+DG+MGD+H+ +QARLMSQALRKL+
Sbjct: 121 DCGEQALEITETMVRSGAVDIVIVDSVAALVPKAEIDGDMGDSHVGLQARLMSQALRKLT 180
Query: 179 HSLSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEET 238
+S S I+IFINQ+R K+ FG P E T GG ALKFY+SVR++++RI +K+ E
Sbjct: 181 AVISKSNCIVIFINQLREKVGVM-FGNP-ETTTGGRALKFYSSVRMDVRRIESLKQAGEV 238
Query: 239 IGSQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DR 297
+G++ VKIVKNK+APPFK A+F++ FGKGIS+E +I+DLA K+GA + YN D+
Sbjct: 239 VGNRTRVKIVKNKVAPPFKEAEFDIMFGKGISKEGDILDLAADCGIIVKSGAWYAYNGDK 298
Query: 298 NFRGKEAFKQFLVENESVREELVIKLREKLVVDHKEPQT 336
+G+E K +L EN V EE+ K+REK +D +T
Sbjct: 299 IGQGRENAKTYLRENPLVCEEVEAKVREKFQLDGTAEET 337
>gi|212715625|ref|ZP_03323753.1| hypothetical protein BIFCAT_00524 [Bifidobacterium catenulatum DSM
16992 = JCM 1194]
gi|212660992|gb|EEB21567.1| hypothetical protein BIFCAT_00524 [Bifidobacterium catenulatum DSM
16992 = JCM 1194]
Length = 394
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/323 (56%), Positives = 248/323 (76%), Gaps = 4/323 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
++ AL AL Q+ SFGKGS M LG + V V+ TGS ALD+ALG GGLPKGR+VE
Sbjct: 22 RRQAALDTALAQVEKSFGKGSAMRLGDR-PEQDVEVIPTGSLALDMALGIGGLPKGRIVE 80
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTLALHV+A AQ+ GG FIDAEHALDP A +GV T++L+++QPD GE
Sbjct: 81 IYGPESSGKTTLALHVVANAQKSGGVAAFIDAEHALDPVYARKLGVDTDSLIVSQPDNGE 140
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D LIRSG++DV+V+DSVAALVPK E++GEMGD+H+ +QARLMSQALRK++ +L+
Sbjct: 141 QALEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKMTGALA 200
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ T IFINQ+R K+ F FG P E T GG ALKFY+SVR++I+RI +K G+E +G++
Sbjct: 201 QAGTTAIFINQLREKIGVF-FGNP-ETTTGGKALKFYSSVRMDIRRIQTIKNGDEAVGNR 258
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+APPFKTA+F++ +G+GIS+E ++D+AL+ K+G+ FTY+ D+ +G
Sbjct: 259 TKVKVVKNKMAPPFKTAEFDVLYGEGISKEGSVLDMALQVNVVKKSGSWFTYDGDQLGQG 318
Query: 302 KEAFKQFLVENESVREELVIKLR 324
+E +QFL +N + EE+ K++
Sbjct: 319 RENVRQFLKDNPELTEEIENKVK 341
>gi|183601363|ref|ZP_02962733.1| recombinase A [Bifidobacterium animalis subsp. lactis HN019]
gi|219683419|ref|YP_002469802.1| recombinase A [Bifidobacterium animalis subsp. lactis AD011]
gi|241191138|ref|YP_002968532.1| recombinase A [Bifidobacterium animalis subsp. lactis Bl-04]
gi|241196544|ref|YP_002970099.1| recombinase A [Bifidobacterium animalis subsp. lactis DSM 10140]
gi|384191391|ref|YP_005577139.1| recombinase A [Bifidobacterium animalis subsp. lactis BB-12]
gi|384192537|ref|YP_005578284.1| recombinase A [Bifidobacterium animalis subsp. lactis CNCM I-2494]
gi|384194131|ref|YP_005579877.1| recombinase A, RecA protein [Bifidobacterium animalis subsp. lactis
BLC1]
gi|384195696|ref|YP_005581441.1| recombinase A [Bifidobacterium animalis subsp. lactis V9]
gi|387821003|ref|YP_006301046.1| recombinase A [Bifidobacterium animalis subsp. lactis B420]
gi|387822681|ref|YP_006302630.1| recombinase A [Bifidobacterium animalis subsp. lactis Bi-07]
gi|423679664|ref|ZP_17654540.1| recombinase A [Bifidobacterium animalis subsp. lactis BS 01]
gi|183218969|gb|EDT89610.1| recombinase A [Bifidobacterium animalis subsp. lactis HN019]
gi|219621069|gb|ACL29226.1| protein RecA [Bifidobacterium animalis subsp. lactis AD011]
gi|240249530|gb|ACS46470.1| recombinase A [Bifidobacterium animalis subsp. lactis Bl-04]
gi|240251098|gb|ACS48037.1| recombinase A [Bifidobacterium animalis subsp. lactis DSM 10140]
gi|289178883|gb|ADC86129.1| RecA [Bifidobacterium animalis subsp. lactis BB-12]
gi|295794127|gb|ADG33662.1| recombinase A [Bifidobacterium animalis subsp. lactis V9]
gi|340365274|gb|AEK30565.1| RecA [Bifidobacterium animalis subsp. lactis CNCM I-2494]
gi|345282990|gb|AEN76844.1| recombinase A, RecA protein [Bifidobacterium animalis subsp. lactis
BLC1]
gi|366041308|gb|EHN17812.1| recombinase A [Bifidobacterium animalis subsp. lactis BS 01]
gi|386653704|gb|AFJ16834.1| RecA protein [Bifidobacterium animalis subsp. lactis B420]
gi|386655289|gb|AFJ18418.1| RecA protein [Bifidobacterium animalis subsp. lactis Bi-07]
Length = 382
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 189/365 (51%), Positives = 263/365 (72%), Gaps = 6/365 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K++ AL AL Q+ FGKGS M LG + + V+ TGS ALD ALG GGLP+GR+VE
Sbjct: 23 KREDALNSALAQVEKQFGKGSAMRLGDR-PEQDIEVIPTGSLALDTALGIGGLPRGRIVE 81
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTLALHV+A AQ+ GG FIDAEHALDP A +GV T++L+++QPD GE
Sbjct: 82 IYGPESSGKTTLALHVVANAQKNGGVAAFIDAEHALDPVYARHLGVDTDSLIVSQPDNGE 141
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D LIRSG++DV+V+DSVAALVPK E++G+MGD+H+ +QARLMSQALRK++ +L+
Sbjct: 142 QALEIADMLIRSGALDVIVIDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKMTGALA 201
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ T IFINQ+R K+ F FG P E T GG ALKFYASVR++I+RI +K +E IG++
Sbjct: 202 QANTTAIFINQLREKIGVF-FGSP-ETTTGGKALKFYASVRMDIRRIQTLKDKDEPIGNR 259
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK+VKNK+APPFKTA+F++ +G+GIS+E I+D+AL+ K+G+ FTYN +G
Sbjct: 260 TRVKVVKNKMAPPFKTAEFDMLYGQGISQEGSILDMALETDVVRKSGSWFTYNGEQLGQG 319
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETVSTISPDSTDEEAA 361
+E ++FL++N + EE+ +++ K + + Q V + + EE +I+ ++ EA
Sbjct: 320 RENVRKFLIDNPKLAEEISTQVKVKTGLISTDDQFGV--DGTEEENGESITTSESNAEAQ 377
Query: 362 AVVEA 366
EA
Sbjct: 378 TSAEA 382
>gi|119026042|ref|YP_909887.1| recombinase A [Bifidobacterium adolescentis ATCC 15703]
gi|118765626|dbj|BAF39805.1| protein recA (Recombinase A) [Bifidobacterium adolescentis ATCC
15703]
Length = 394
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/323 (56%), Positives = 247/323 (76%), Gaps = 4/323 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
++ AL AL Q+ SFGKGS M LG + V V+ TGS ALD+ALG GGLPKGR+VE
Sbjct: 36 RRQAALDTALAQVEKSFGKGSAMRLGDR-PEQDVEVIPTGSLALDMALGIGGLPKGRIVE 94
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTLALHV+A AQ+ GG FIDAEHALDP A +GV T++L+++QPD GE
Sbjct: 95 IYGPESSGKTTLALHVVANAQKAGGVAAFIDAEHALDPVYARKLGVDTDSLIVSQPDNGE 154
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D LIRSG++DV+V+DSVAALVPK E++GEMGD+H+ +QARLMSQALRK++ +L+
Sbjct: 155 QALEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKMTGALA 214
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ T IFINQ+R K+ F FG P E T GG ALKFYASVR++I+RI +K G+E +G++
Sbjct: 215 QAGTTAIFINQLREKIGVF-FGNP-ETTTGGKALKFYASVRMDIRRIQTIKNGDEAVGNR 272
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRG 301
VK+VKNK+APPFKTA+F++ +G+GIS+E ++D+AL+ K+G+ FTY D+ +G
Sbjct: 273 TKVKVVKNKMAPPFKTAEFDVLYGEGISKEGSVLDMALQANVVKKSGSWFTYEGDQLGQG 332
Query: 302 KEAFKQFLVENESVREELVIKLR 324
+E +QFL +N + EE+ K++
Sbjct: 333 RENVRQFLKDNPELTEEIENKVK 355
>gi|88798291|ref|ZP_01113877.1| recombinase A [Reinekea blandensis MED297]
gi|88779067|gb|EAR10256.1| recombinase A [Reinekea sp. MED297]
Length = 365
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/361 (52%), Positives = 252/361 (69%), Gaps = 4/361 (1%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVV 61
+ K+ AL AL QI FGKGS+M +G +VP +STGS LDIALG GGLPKGRVV
Sbjct: 8 TNKEKALSAALSQIERQFGKGSVMRMGDQ-EKVNVPAISTGSLGLDIALGIGGLPKGRVV 66
Query: 62 EIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCG 121
EIYGPE+SGKTTL L VIAEAQ+ GG C F+DAEHALDP+ A +GV ++LL++QPD G
Sbjct: 67 EIYGPESSGKTTLTLQVIAEAQKAGGTCAFVDAEHALDPNYAGKLGVNVDDLLVSQPDTG 126
Query: 122 EQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSL 181
EQAL + D L+RS +VDV++VDSVAALVPK E++GEMGD H+ +QARLMSQALRK++ ++
Sbjct: 127 EQALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDHHVGLQARLMSQALRKITGNI 186
Query: 182 SLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGS 241
+ ++IFINQ+R K+ FG P E T GGNALKFY+SVRL+I+R G +K G+E +GS
Sbjct: 187 KTANCLVIFINQIRMKIGVM-FGNP-ETTTGGNALKFYSSVRLDIRRTGTIKDGDEVVGS 244
Query: 242 QIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-R 300
+ VK+VKNK+APPFK A+F++ +GKGI E+IDL +K K+GA ++Y +
Sbjct: 245 ETRVKVVKNKVAPPFKQAEFQIMYGKGIYHLGEVIDLGVKIGLVEKSGAWYSYKGNKIGQ 304
Query: 301 GKEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETVSTISPDSTDEEA 360
GK +FL EN + +E+ +R K + D + + A D + E+ S ++ E
Sbjct: 305 GKANAAKFLGENPEMAQEIEAAIRAKYLEDQSDVKPAEADAKAEEKAESKPKTSASKAEK 364
Query: 361 A 361
A
Sbjct: 365 A 365
>gi|440700380|ref|ZP_20882633.1| RecA protein [Streptomyces turgidiscabies Car8]
gi|440277032|gb|ELP65215.1| RecA protein [Streptomyces turgidiscabies Car8]
Length = 374
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 195/367 (53%), Positives = 261/367 (71%), Gaps = 13/367 (3%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLG-RSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
+ ++ AL AL QI FGKG++M LG R P + V+ TGS ALD+ALG GGLP+GRV
Sbjct: 4 TDREKALDAALAQIERQFGKGAVMRLGERPNEP--IEVIPTGSTALDVALGVGGLPRGRV 61
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
VE+YGPE+SGKTTL LH +A AQ+ GG F+DAEHALDP A+ +GV +NL+L+QPD
Sbjct: 62 VEVYGPESSGKTTLTLHAVANAQKAGGQVAFVDAEHALDPEYAKKLGVDIDNLILSQPDN 121
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL +VD L+RSG++D++V+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ +
Sbjct: 122 GEQALEIVDMLVRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITGA 181
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
LS SQT IFINQ+R K+ FG P E T GG ALKFYASVRL+I+RI +K G + +G
Sbjct: 182 LSQSQTTAIFINQLREKIGVM-FGSP-ETTTGGRALKFYASVRLDIRRIETLKDGTDAVG 239
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNF 299
++ VK+VKNK+APPFK A+F++ +G+GISRE +ID+ ++H F KAGA +TY D+
Sbjct: 240 NRTRVKVVKNKVAPPFKQAEFDILYGQGISREGGLIDMGVEHGFVRKAGAWYTYEGDQLG 299
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETVSTISPDSTDEE 359
+GKE + FL +N + E+ K+ EKL V V E TEE + + +E
Sbjct: 300 QGKENARNFLKDNPDLANEIEKKILEKLGV-------GVRPEKPTEEPGADAAVTVVSDE 352
Query: 360 AAAVVEA 366
AA V A
Sbjct: 353 AAKTVPA 359
>gi|119713373|gb|ABL97436.1| recA DNA recombination protein [uncultured marine bacterium
EB80_69G07]
Length = 382
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 179/327 (54%), Positives = 243/327 (74%), Gaps = 4/327 (1%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
+ +K+ AL A+ QIT +FGKGS+M LG + +STGS +LD+ALG GGLPKGR+
Sbjct: 19 IKEKNKALDAAISQITDNFGKGSVMKLGEK-RAMDIESISTGSLSLDLALGIGGLPKGRI 77
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+E+YGPE+SGKTTLAL V+AEAQ+ GG C F+DAEHALDP A+ +GV TE LL++QPD
Sbjct: 78 IEVYGPESSGKTTLALQVVAEAQKAGGICAFVDAEHALDPVYAKKLGVNTEELLISQPDA 137
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + DTL++SGS+ V+V+DSVAAL PK E++GEMGD H+ +Q+RLMSQALRKL+ S
Sbjct: 138 GEQALEIADTLVKSGSISVIVIDSVAALTPKAEIEGEMGDHHVGLQSRLMSQALRKLTGS 197
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
+S + T++IFINQ+R K+ FG P E T GGNALKFY+SVR++I+RIG +K +E IG
Sbjct: 198 ISNTNTMMIFINQIRMKIGVM-FGSP-ETTSGGNALKFYSSVRMDIRRIGAIKDKDEIIG 255
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF- 299
+ VK+VKNK+APPFK +F+L +G+GIS+ E++DL K K+GA + Y
Sbjct: 256 NTTRVKVVKNKVAPPFKVVEFDLMYGRGISKMGELVDLGAKADIIEKSGAWYAYKGEKIG 315
Query: 300 RGKEAFKQFLVENESVREELVIKLREK 326
+G+E K +L +N V E+ + +REK
Sbjct: 316 QGRENAKTYLAQNPKVAAEIEMAIREK 342
>gi|383389241|gb|AFH09598.1| recombinase A [Aeromonas hydrophila]
Length = 354
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/326 (56%), Positives = 243/326 (74%), Gaps = 4/326 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGSIM LG S T + +STGS +LD+ALG GGLP GR+VEI
Sbjct: 5 KQKALAAALGQIEKQFGKGSIMRLGDSKT-MDIEAISTGSLSLDVALGIGGLPCGRIVEI 63
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIAEAQ++G C F+DAEHALDP A +GV ++LL++QPD GEQ
Sbjct: 64 YGPESSGKTTLTLQVIAEAQKKGKTCAFVDAEHALDPIYAAKLGVNVDDLLISQPDTGEQ 123
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RS +VDV++VDSVAAL PK E++GEMGD+H+ +QARLMSQALRKL+ ++
Sbjct: 124 ALEICDMLVRSNAVDVIIVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKN 183
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
+ + IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+G+E +G++
Sbjct: 184 ANCLCIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAIKEGDEVVGNET 241
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK A+F++ +G GIS+E E++DL +KHK KAGA ++YN +GK
Sbjct: 242 RVKVVKNKVAPPFKQAEFQIFYGAGISKEGELVDLGVKHKLIDKAGAWYSYNGEKIGQGK 301
Query: 303 EAFKQFLVENESVREELVIKLREKLV 328
+ EN+++ E+ +LRE L+
Sbjct: 302 ANVMKLFAENKAMAGEVEARLRELLL 327
>gi|91792566|ref|YP_562217.1| recombinase A [Shewanella denitrificans OS217]
gi|122968879|sp|Q12PY2.1|RECA_SHEDO RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|91714568|gb|ABE54494.1| recA protein [Shewanella denitrificans OS217]
Length = 353
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 186/343 (54%), Positives = 247/343 (72%), Gaps = 5/343 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K+ AL L QI FGKGSIM LG T V +STGS +LD+ALG GGLP GR+VE
Sbjct: 6 NKEKALAAVLSQIEKQFGKGSIMKLGEDRT-MDVETISTGSLSLDVALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A+ +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLEVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV+VVDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALTRSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+R G +K G+E +G++
Sbjct: 185 QSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRTGAIKDGDEVVGNE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+R E++DL + HK KAGA ++Y D+ +G
Sbjct: 243 TRVKVVKNKIAAPFKQAEFQILYGQGINRTGELVDLGVAHKLVEKAGAWYSYKGDKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDST 344
+ ++L EN ++ +E+ LRE ++++ P+ + D D
Sbjct: 303 RANAGRYLTENPAIAQEIDTLLRE-MLLNSNAPKESAADVDDN 344
>gi|115376627|ref|ZP_01463857.1| RecA protein [Stigmatella aurantiaca DW4/3-1]
gi|310819426|ref|YP_003951784.1| RecA protein [Stigmatella aurantiaca DW4/3-1]
gi|115366370|gb|EAU65375.1| RecA protein [Stigmatella aurantiaca DW4/3-1]
gi|309392498|gb|ADO69957.1| RecA protein [Stigmatella aurantiaca DW4/3-1]
Length = 360
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 190/342 (55%), Positives = 253/342 (73%), Gaps = 5/342 (1%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLGRS-VTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
S+K+ A++ A+ + FGKGSIM LG+ R + +STGS +LDIALG GG+PKGR+
Sbjct: 5 SEKEKAIELAMSAVERQFGKGSIMRLGKDEPLTRDIQAISTGSISLDIALGVGGVPKGRI 64
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
VEI+GPE+SGKTTL LH++AEAQ++GG C +IDAEHALD A +GV+T++LLL+QPD
Sbjct: 65 VEIFGPESSGKTTLCLHIVAEAQKRGGICGYIDAEHALDVGYARKLGVRTDDLLLSQPDT 124
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + + L+RSG++DV+VVDSVAALVPK EL+GEMGDAHM +QARLMSQALRKL+ +
Sbjct: 125 GEQALEIAEMLVRSGAIDVLVVDSVAALVPKAELEGEMGDAHMGVQARLMSQALRKLTGT 184
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
+S SQT +IFINQ+R K+ FG P E T GGNALKFYAS RL+I+RIG +K GE +G
Sbjct: 185 ISKSQTCVIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASQRLDIRRIGAIKNGENVVG 242
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNF 299
S+ VK+VKNK+APPFK +F++ +G GISRE ++IDLA K+G+ F + +R
Sbjct: 243 SRTRVKVVKNKVAPPFKEVEFDIMYGTGISREGDLIDLASNENIVEKSGSWFAFKGERIG 302
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDE 341
+G+E K +L E+ +E+ ++ EK V K AV DE
Sbjct: 303 QGRENAKDYLREHPDTYKEIEARVLEKYGV-TKPAVAAVPDE 343
>gi|110834662|ref|YP_693521.1| recA protein [Alcanivorax borkumensis SK2]
gi|110647773|emb|CAL17249.1| recA protein [Alcanivorax borkumensis SK2]
Length = 344
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 179/331 (54%), Positives = 250/331 (75%), Gaps = 4/331 (1%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
MS K AL AL QI FGKGS+M +G R +P +STGS LD+ALG GGLPKGR+
Sbjct: 1 MSDKSKALSAALSQIERQFGKGSVMRMGDRKRER-MPSISTGSLGLDVALGIGGLPKGRI 59
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
VEIYGPE+SGKTTL L VIA+AQ++G C F+DAEHALDP AE +GV ++L+++QPD
Sbjct: 60 VEIYGPESSGKTTLTLSVIAQAQKKGATCAFVDAEHALDPDYAEKLGVNVDDLIVSQPDT 119
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + D L+RSG+VDVV+VDSVAALVPK E++GEMGD H+ +QARLMSQALRK++ +
Sbjct: 120 GEQALEITDMLVRSGAVDVVIVDSVAALVPKAEIEGEMGDTHVGLQARLMSQALRKITGN 179
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
+ + T+++FINQ+R K+ FG P E T GGNALKFY+SVRL+I+RIG VK+G+E G
Sbjct: 180 VKNANTLVVFINQIRMKIGVM-FGNP-ETTTGGNALKFYSSVRLDIRRIGAVKQGDEVTG 237
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNF 299
++ VK+VKNK++PPF+ A+F++ +G+GI++ E++DL ++ K+GA + Y D+
Sbjct: 238 NETRVKVVKNKVSPPFRQAEFQILYGQGINQLGEVLDLGVQQGLVDKSGAWYAYKGDKIG 297
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVD 330
+GK+ ++L EN ++ EE+ ++R +L+ D
Sbjct: 298 QGKQNACEYLRENPAIAEEIETEIRARLLPD 328
>gi|333369804|ref|ZP_08461900.1| recombination protein A [Psychrobacter sp. 1501(2011)]
gi|332969626|gb|EGK08643.1| recombination protein A [Psychrobacter sp. 1501(2011)]
Length = 350
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 186/325 (57%), Positives = 241/325 (74%), Gaps = 4/325 (1%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL+ AL QI FGK +IM LG + V VVSTGS LDIALG GGLPKGR+VEIYGP
Sbjct: 8 ALKAALGQIEKQFGKNTIMHLGDNSAALDVDVVSTGSLGLDIALGIGGLPKGRIVEIYGP 67
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTTL L IAE Q+QGG C FIDAEHALDP A +GV T++LL++QPD GEQAL
Sbjct: 68 ESSGKTTLTLQAIAECQKQGGTCAFIDAEHALDPVYARKLGVNTDDLLVSQPDNGEQALE 127
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ D L+RSG++D++V+DSVAAL P+ E++GEMGD+HM +QARLMSQALRK++ + S
Sbjct: 128 ITDMLVRSGALDMIVIDSVAALTPRAEIEGEMGDSHMGLQARLMSQALRKITGNAKRSNC 187
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK G+E IG+Q VK
Sbjct: 188 MVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAVKSGDEIIGNQTRVK 245
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGKEAF 305
++KNK+APPF+ A+FE+ +G+G + +E+IDL ++ KAGA ++Y D +GK
Sbjct: 246 VIKNKMAPPFRQAEFEITYGEGTNHLAEVIDLGVEIGVVGKAGAWYSYGDEKIGQGKANS 305
Query: 306 KQFLVENESVREELVIKLR-EKLVV 329
FL +N ++ EE+ K+R EKL V
Sbjct: 306 VLFLKDNPAIAEEIEAKIRAEKLAV 330
>gi|302389774|ref|YP_003825595.1| recombinase A [Thermosediminibacter oceani DSM 16646]
gi|302200402|gb|ADL07972.1| RecA protein [Thermosediminibacter oceani DSM 16646]
Length = 343
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/343 (53%), Positives = 260/343 (75%), Gaps = 4/343 (1%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
M +K AL+ AL QI FGKGSIM LG + + +V V+ TG+ LDIALG GG+P+GR+
Sbjct: 1 MMEKQKALEMALAQIERQFGKGSIMRLGEAESKFNVEVIPTGALPLDIALGVGGVPRGRI 60
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+EI+GPE+SGKTT+ALH++AEAQ+ GG FIDAEHALDP+ A +GV T+NLL++QPD
Sbjct: 61 IEIFGPESSGKTTVALHIVAEAQKAGGTAAFIDAEHALDPTYARKLGVDTDNLLISQPDT 120
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + + L+RSG+VDV+V+DSVAALVPK EL+GEMG+AH+ +QARLMSQALRKL+ S
Sbjct: 121 GEQALEIAEALVRSGAVDVIVIDSVAALVPKAELEGEMGEAHVGLQARLMSQALRKLAGS 180
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
+S S+T+ IFINQ+R K+ FG P E T GG ALKFYASVR+ +++ ++K GE +G
Sbjct: 181 ISKSKTVAIFINQLREKVGVM-FGNP-ETTPGGRALKFYASVRMEVRKTSVIKDGENVVG 238
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNF 299
++ +VK+VKNK+APPFK+A+F++ +G+GISRE ++D A + K+GA ++Y +R
Sbjct: 239 TRASVKVVKNKVAPPFKSAEFDIMYGEGISREGCVLDFATEAGIIQKSGAWYSYEKERIG 298
Query: 300 RGKEAFKQFLVENESVREELVIKLREKL-VVDHKEPQTAVTDE 341
+G+E KQ+L E+ V + + +K++EK +V + +T T+E
Sbjct: 299 QGRENAKQYLKEHPEVLKAIELKVKEKFNLVKSESKKTEGTEE 341
>gi|384201328|ref|YP_005587075.1| recombinase RecA [Bifidobacterium longum subsp. longum KACC 91563]
gi|291516744|emb|CBK70360.1| RecA protein [Bifidobacterium longum subsp. longum F8]
gi|338754335|gb|AEI97324.1| recombinase RecA [Bifidobacterium longum subsp. longum KACC 91563]
Length = 418
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/323 (56%), Positives = 250/323 (77%), Gaps = 4/323 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K+ AL AL Q+ SFGKGS M LG ++V V+ TGS ALD+ALG GGLPKGR+VE
Sbjct: 43 KRKAALDTALAQVEKSFGKGSAMRLGDQ-PEQNVEVIPTGSLALDMALGIGGLPKGRIVE 101
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTLALHV+A AQ++GG +IDAEHALDP+ A +GV T++L+++QPD GE
Sbjct: 102 IYGPESSGKTTLALHVVANAQKKGGVAAYIDAEHALDPAYARKLGVDTDSLIVSQPDNGE 161
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D LIRSG++DV+V+DSVAALVPK E++GEMGD+H+ +QARLMSQALRK++ +L+
Sbjct: 162 QALEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKMTGALA 221
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ T IFINQ+R K+ F FG P E T GG ALKFYASVRL+I+RI +K G+E +G++
Sbjct: 222 QAGTTAIFINQLREKIGVF-FGNP-ETTTGGKALKFYASVRLDIRRIQTLKNGDEAVGNR 279
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRG 301
VK+VKNK+APPFK+A+F++ +G+GISRE +ID+A + K+G+ FTY D+ +G
Sbjct: 280 TRVKVVKNKMAPPFKSAEFDMLYGEGISREGSVIDMAQQVGVVKKSGSWFTYEGDQLGQG 339
Query: 302 KEAFKQFLVENESVREELVIKLR 324
+E +QFL +N ++ EE+ K++
Sbjct: 340 REKVRQFLKDNPAITEEIENKVK 362
>gi|508860|gb|AAB36572.1| RecA protein [Streptomyces venezuelae ATCC 10712]
Length = 377
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 185/330 (56%), Positives = 252/330 (76%), Gaps = 6/330 (1%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLG-RSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
+ ++ AL AL QI FGKG++M +G R+ P + V+STGS ALDIALG GGLP+GRV
Sbjct: 4 TDREKALDAALAQIERQFGKGAVMRMGDRTQEP--IEVISTGSTALDIALGVGGLPRGRV 61
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
VEIYGPE+SGKTTL LH +A AQ+ GG F+DAEHALDP A+ +GV +NL+L+QPD
Sbjct: 62 VEIYGPESSGKTTLTLHAVANAQKAGGQVAFVDAEHALDPEYAKKLGVDIDNLILSQPDN 121
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL +VD L+RSG++D++V+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ +
Sbjct: 122 GEQALEIVDMLVRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITSA 181
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
L+ S+T IFINQ+R K+ FG P E T GG ALKFYASVRL+I+RI +K G + +G
Sbjct: 182 LNQSKTTAIFINQLREKIGVM-FGSP-ETTTGGRALKFYASVRLDIRRIETLKDGTDAVG 239
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNF 299
++ VK+VKNK+APPFK A+F++ +G+GISRE +ID+ ++H F KAGA +TY D+
Sbjct: 240 NRTRVKVVKNKVAPPFKQAEFDILYGQGISREGGLIDMGVEHGFVRKAGAWYTYEGDQLG 299
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVV 329
+GKE + FL +N + +E+ K++EKL V
Sbjct: 300 QGKENARNFLKDNPDLADEIERKIKEKLGV 329
>gi|377819893|ref|YP_004976264.1| recombinase A [Burkholderia sp. YI23]
gi|357934728|gb|AET88287.1| RecA protein [Burkholderia sp. YI23]
Length = 356
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 189/329 (57%), Positives = 242/329 (73%), Gaps = 3/329 (0%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVV 61
+ K AL AL QI FGKGSIM LG + VVSTGS LDIALG GGLP+GRVV
Sbjct: 13 ADKSKALAAALSQIEKQFGKGSIMRLGAGEAVEDIQVVSTGSLGLDIALGVGGLPRGRVV 72
Query: 62 EIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCG 121
EIYGPE+SGKTTL L V+AE Q+ GG FIDAEHALD A +GV LL++QPD G
Sbjct: 73 EIYGPESSGKTTLTLQVVAEMQKLGGTAAFIDAEHALDVQYAGKLGVNVPELLISQPDTG 132
Query: 122 EQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSL 181
EQAL +VD L+RSGS+D++V+DSVAALVPK E++GEMGD+ +QARLMSQALRKL+ S+
Sbjct: 133 EQALEIVDALVRSGSIDMIVIDSVAALVPKAEIEGEMGDSLPGLQARLMSQALRKLTGSI 192
Query: 182 SLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGS 241
+ ++IFINQ+R K+ FG P E T GGNALKFY+SVRL+I+RIG +KK +E IG+
Sbjct: 193 KRTNCLVIFINQIRMKIGVM-FGNP-ETTTGGNALKFYSSVRLDIRRIGSIKKNDEVIGN 250
Query: 242 QIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFR 300
+ VK+VKNK++PPF+ A F++ +G+GISR+ EIIDL ++ K KAGA ++YN DR +
Sbjct: 251 ETRVKVVKNKVSPPFREAIFDILYGEGISRQGEIIDLGVQAKLVDKAGAWYSYNGDRIGQ 310
Query: 301 GKEAFKQFLVENESVREELVIKLREKLVV 329
GK+ ++FL EN + E+ K+RE L V
Sbjct: 311 GKDNAREFLRENPDIAREIENKIRESLGV 339
>gi|408681142|ref|YP_006880969.1| RecA protein [Streptomyces venezuelae ATCC 10712]
gi|341941949|sp|P48295.2|RECA_STRVP RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|328885471|emb|CCA58710.1| RecA protein [Streptomyces venezuelae ATCC 10712]
Length = 378
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 185/330 (56%), Positives = 252/330 (76%), Gaps = 6/330 (1%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLG-RSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
+ ++ AL AL QI FGKG++M +G R+ P + V+STGS ALDIALG GGLP+GRV
Sbjct: 4 TDREKALDAALAQIERQFGKGAVMRMGDRTQEP--IEVISTGSTALDIALGVGGLPRGRV 61
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
VEIYGPE+SGKTTL LH +A AQ+ GG F+DAEHALDP A+ +GV +NL+L+QPD
Sbjct: 62 VEIYGPESSGKTTLTLHAVANAQKAGGQVAFVDAEHALDPEYAKKLGVDIDNLILSQPDN 121
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL +VD L+RSG++D++V+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ +
Sbjct: 122 GEQALEIVDMLVRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITSA 181
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
L+ S+T IFINQ+R K+ FG P E T GG ALKFYASVRL+I+RI +K G + +G
Sbjct: 182 LNQSKTTAIFINQLREKIGVM-FGSP-ETTTGGRALKFYASVRLDIRRIETLKDGTDAVG 239
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNF 299
++ VK+VKNK+APPFK A+F++ +G+GISRE +ID+ ++H F KAGA +TY D+
Sbjct: 240 NRTRVKVVKNKVAPPFKQAEFDILYGQGISREGGLIDMGVEHGFVRKAGAWYTYEGDQLG 299
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVV 329
+GKE + FL +N + +E+ K++EKL V
Sbjct: 300 QGKENARNFLKDNPDLADEIERKIKEKLGV 329
>gi|383389273|gb|AFH09614.1| recombinase A [Aeromonas hydrophila subsp. dhakensis]
gi|383389285|gb|AFH09620.1| recombinase A [Aeromonas aquariorum]
Length = 354
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 189/347 (54%), Positives = 249/347 (71%), Gaps = 8/347 (2%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGSIM LG S T + +STGS +LD+ALG GGLP GR+VEI
Sbjct: 5 KQKALAAALGQIEKQFGKGSIMRLGDSKT-MDIEAISTGSLSLDVALGIGGLPCGRIVEI 63
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIAEAQ++G C F+DAEHALDP A +GV ++LL++QPD GEQ
Sbjct: 64 YGPESSGKTTLTLQVIAEAQKKGKTCAFVDAEHALDPIYAAKLGVNVDDLLISQPDTGEQ 123
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RS +VDV++VDSVAAL PK E++GEMGD+H+ +QARLMSQALRKL+ ++
Sbjct: 124 ALEICDMLVRSNAVDVIIVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKN 183
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
+ + IFINQ+R K+ FG P E T GGNALKFYASVRL+I+R G +K+G+E +G++
Sbjct: 184 ANCLCIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRTGAIKEGDEVVGNET 241
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK A+F++ +G GIS+E E++DL +KHK KAGA ++YN +GK
Sbjct: 242 RVKVVKNKVAPPFKQAEFQIFYGAGISKEGELVDLGVKHKLIDKAGAWYSYNGEKIGQGK 301
Query: 303 EAFKQFLVENESVREELVIKLREKLVVD----HKEPQTAVTDEDSTE 345
+ EN+++ E+ KLRE L+ ++P A DE E
Sbjct: 302 ANVMKLFAENKALAGEVEAKLRELLLSGATPVEEKPSAAEYDEFEAE 348
>gi|388256999|ref|ZP_10134179.1| recombinase A [Cellvibrio sp. BR]
gi|387939203|gb|EIK45754.1| recombinase A [Cellvibrio sp. BR]
Length = 347
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/328 (55%), Positives = 242/328 (73%), Gaps = 4/328 (1%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVV 61
+ K+ ALQ AL QI FGKG++M +G +P +STGS LD+ALG GGLPKGR++
Sbjct: 3 ANKEKALQAALSQIERQFGKGTVMRMGDK-EQVAIPAISTGSLGLDVALGIGGLPKGRII 61
Query: 62 EIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCG 121
EIYGPE+SGKTTL L VIAEAQR GG C FIDAEHALDP A +GV E+L+++QPD G
Sbjct: 62 EIYGPESSGKTTLTLQVIAEAQRMGGTCAFIDAEHALDPIYASKLGVNVEDLIISQPDTG 121
Query: 122 EQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSL 181
EQAL + D L+RSG+VDV+VVDSVAAL P+ E++GEMGD H+ +QARLMSQALRK++ ++
Sbjct: 122 EQALEVTDMLVRSGAVDVLVVDSVAALTPRAEIEGEMGDHHVGLQARLMSQALRKITGNI 181
Query: 182 SLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGS 241
+ ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+GEE +GS
Sbjct: 182 KNANCLVIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKEGEEVVGS 239
Query: 242 QIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-R 300
+ VK+VKNK+APPFK A+F++ +G GI+R E++D +K KAGA ++Y +
Sbjct: 240 ETRVKVVKNKVAPPFKQAEFQILYGSGINRMGEVVDYGVKLGMIDKAGAWYSYQGNKIGQ 299
Query: 301 GKEAFKQFLVENESVREELVIKLREKLV 328
GK +FL EN + +EL ++R +L+
Sbjct: 300 GKNNVMKFLQENPIIAQELEQRVRTELL 327
>gi|152971553|ref|YP_001336662.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
gi|238896150|ref|YP_002920886.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044]
gi|262043944|ref|ZP_06017029.1| recombinase A [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
13884]
gi|329999037|ref|ZP_08303292.1| RecA protein [Klebsiella sp. MS 92-3]
gi|365140024|ref|ZP_09346144.1| protein recA [Klebsiella sp. 4_1_44FAA]
gi|378980261|ref|YP_005228402.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae HS11286]
gi|386036158|ref|YP_005956071.1| recombinase A [Klebsiella pneumoniae KCTC 2242]
gi|402779349|ref|YP_006634895.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae 1084]
gi|419764367|ref|ZP_14290607.1| RecA protein [Klebsiella pneumoniae subsp. pneumoniae DSM 30104]
gi|419972489|ref|ZP_14487917.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH1]
gi|419980167|ref|ZP_14495453.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH2]
gi|419983588|ref|ZP_14498738.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH4]
gi|419991126|ref|ZP_14506093.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH5]
gi|419997255|ref|ZP_14512052.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH6]
gi|420001055|ref|ZP_14515712.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH7]
gi|420008090|ref|ZP_14522581.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH8]
gi|420013617|ref|ZP_14527927.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH9]
gi|420019459|ref|ZP_14533652.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH10]
gi|420024950|ref|ZP_14538961.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH11]
gi|420029935|ref|ZP_14543763.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH12]
gi|420035663|ref|ZP_14549326.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH14]
gi|420042530|ref|ZP_14556023.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH16]
gi|420048044|ref|ZP_14561359.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH17]
gi|420053116|ref|ZP_14566295.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH18]
gi|420058782|ref|ZP_14571793.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH19]
gi|420065304|ref|ZP_14578110.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH20]
gi|420070898|ref|ZP_14583547.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH21]
gi|420075686|ref|ZP_14588161.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH22]
gi|420084293|ref|ZP_14596555.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH23]
gi|421913376|ref|ZP_16343061.1| RecA protein [Klebsiella pneumoniae subsp. pneumoniae ST258-K26BO]
gi|421914417|ref|ZP_16344064.1| RecA protein [Klebsiella pneumoniae subsp. pneumoniae ST258-K28BO]
gi|424832001|ref|ZP_18256729.1| protein RecA [Klebsiella pneumoniae subsp. pneumoniae Ecl8]
gi|424932153|ref|ZP_18350525.1| Protein RecA (Recombinase A) [Klebsiella pneumoniae subsp.
pneumoniae KpQ3]
gi|425082836|ref|ZP_18485933.1| protein recA [Klebsiella pneumoniae subsp. pneumoniae WGLW2]
gi|428147860|ref|ZP_18995763.1| RecA protein [Klebsiella pneumoniae subsp. pneumoniae ST512-K30BO]
gi|428934712|ref|ZP_19008220.1| recombinase A [Klebsiella pneumoniae JHCK1]
gi|428941319|ref|ZP_19014370.1| recombinase A [Klebsiella pneumoniae VA360]
gi|449059587|ref|ZP_21737279.1| recombinase A [Klebsiella pneumoniae hvKP1]
gi|166220653|sp|A6TCW1.1|RECA_KLEP7 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|150956402|gb|ABR78432.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
gi|238548468|dbj|BAH64819.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044]
gi|259038708|gb|EEW39894.1| recombinase A [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
13884]
gi|328538477|gb|EGF64592.1| RecA protein [Klebsiella sp. MS 92-3]
gi|339763286|gb|AEJ99506.1| recombinase A [Klebsiella pneumoniae KCTC 2242]
gi|363653899|gb|EHL92843.1| protein recA [Klebsiella sp. 4_1_44FAA]
gi|364519672|gb|AEW62800.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae HS11286]
gi|397346478|gb|EJJ39592.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH2]
gi|397350898|gb|EJJ43984.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH1]
gi|397355220|gb|EJJ48230.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH4]
gi|397363048|gb|EJJ55691.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH6]
gi|397364475|gb|EJJ57105.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH5]
gi|397372580|gb|EJJ65064.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH7]
gi|397379700|gb|EJJ71891.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH9]
gi|397383651|gb|EJJ75785.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH8]
gi|397389151|gb|EJJ81101.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH10]
gi|397398253|gb|EJJ89918.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH11]
gi|397402394|gb|EJJ93997.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH12]
gi|397407680|gb|EJJ99065.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH14]
gi|397415988|gb|EJK07167.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH17]
gi|397416332|gb|EJK07507.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH16]
gi|397424533|gb|EJK15431.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH18]
gi|397431741|gb|EJK22412.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH20]
gi|397436620|gb|EJK27206.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH19]
gi|397440984|gb|EJK31372.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH21]
gi|397448185|gb|EJK38364.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH22]
gi|397450324|gb|EJK40432.1| recombinase A [Klebsiella pneumoniae subsp. pneumoniae KPNIH23]
gi|397742950|gb|EJK90168.1| RecA protein [Klebsiella pneumoniae subsp. pneumoniae DSM 30104]
gi|402540290|gb|AFQ64439.1| RecA protein [Klebsiella pneumoniae subsp. pneumoniae 1084]
gi|405599155|gb|EKB72331.1| protein recA [Klebsiella pneumoniae subsp. pneumoniae WGLW2]
gi|407806340|gb|EKF77591.1| Protein RecA (Recombinase A) [Klebsiella pneumoniae subsp.
pneumoniae KpQ3]
gi|410112696|emb|CCM85686.1| RecA protein [Klebsiella pneumoniae subsp. pneumoniae ST258-K26BO]
gi|410123173|emb|CCM86689.1| RecA protein [Klebsiella pneumoniae subsp. pneumoniae ST258-K28BO]
gi|414709440|emb|CCN31144.1| protein RecA [Klebsiella pneumoniae subsp. pneumoniae Ecl8]
gi|426300665|gb|EKV62938.1| recombinase A [Klebsiella pneumoniae VA360]
gi|426302158|gb|EKV64370.1| recombinase A [Klebsiella pneumoniae JHCK1]
gi|427542181|emb|CCM91901.1| RecA protein [Klebsiella pneumoniae subsp. pneumoniae ST512-K30BO]
gi|448874712|gb|EMB09747.1| recombinase A [Klebsiella pneumoniae hvKP1]
Length = 352
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 194/346 (56%), Positives = 246/346 (71%), Gaps = 4/346 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG T V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRT-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV+VVDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+G+ +GS+
Sbjct: 185 QSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKEGDNVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +K K KAGA ++YN D+ +G
Sbjct: 243 TRVKVVKNKIAAPFKQAEFQILYGEGINFYGELVDLGVKEKLIEKAGAWYSYNGDKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEET 347
K +L EN + +E+ K+RE L+ + V D + EET
Sbjct: 303 KANAITWLKENPAAAKEIEKKVRELLLNNQDAKPDFVVDGNDAEET 348
>gi|452990331|emb|CCQ98553.1| multifunctional SOS repair factor [Clostridium ultunense Esp]
Length = 359
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 186/356 (52%), Positives = 257/356 (72%), Gaps = 10/356 (2%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
+S + AL++AL QI FGKGSIM LG + V VV++GS ALD+ALG GG P+GR+
Sbjct: 9 VSDRKAALEKALSQIEKQFGKGSIMRLGEASQANQVSVVTSGSIALDVALGVGGYPRGRI 68
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+EIYGPE+SGKTT+ALH IAE QR GG FIDAEHALDP+ AE +GV + LL++QPD
Sbjct: 69 IEIYGPESSGKTTVALHAIAEVQRIGGTAAFIDAEHALDPTYAEKLGVNIDELLISQPDT 128
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + + L+RSG++D+VV+DSVAALVPK E+DGEMGD+H+ +QARLMSQALRKLS +
Sbjct: 129 GEQALEICEALVRSGAIDIVVIDSVAALVPKAEIDGEMGDSHVGLQARLMSQALRKLSGA 188
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
++ S+TI IFINQ+R K+ FG P E T GG ALKFYAS+RL+++R +K+G + +G
Sbjct: 189 INKSKTIAIFINQLREKVGVM-FGNP-ETTPGGRALKFYASIRLDVRRAESIKQGNDMVG 246
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF- 299
S+ +K+VKNK+APPF++A ++ FG+GIS+E +ID+A K+GA +++ ++
Sbjct: 247 SRTKIKVVKNKVAPPFRSADVDIVFGEGISKEGSLIDMATDLDIIVKSGAWYSFREQRLG 306
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVDHK--EPQTAVTDEDSTEETVSTISP 353
+G+E KQFL EN +V E+ E+L+ +H P A D+ S +E + P
Sbjct: 307 QGRENAKQFLKENPAVAAEI-----EQLIREHYSLNPAPATGDDSSYKEEGEELEP 357
>gi|399888392|ref|ZP_10774269.1| recombinase A [Clostridium arbusti SL206]
Length = 352
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/341 (53%), Positives = 257/341 (75%), Gaps = 4/341 (1%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
A++ A+ QI FGKGSIM LG + +STG ALDIALG GG+PKGR++EIYGP
Sbjct: 8 AIEAAMGQIEKQFGKGSIMKLGEHGIA-DIDSISTGCLALDIALGIGGVPKGRIIEIYGP 66
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTT+ALH+IAEAQ+ G FIDAEHALDPS A+ +GV TENL+++QPD GEQ L
Sbjct: 67 ESSGKTTVALHIIAEAQKTDGTAAFIDAEHALDPSYAKRLGVDTENLIVSQPDTGEQGLE 126
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ + L+RSG++DV+VVDSVAALVP+ E++GEMGD+H+ +QARLMSQALRKL+ +++ S
Sbjct: 127 IAEALVRSGAIDVIVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLAGAINKSNC 186
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
+++FINQ+R K+ FG P E T GG ALKFYASVR++I+RI +K+GEE IG++ VK
Sbjct: 187 VVVFINQLREKVGIM-FGNP-ETTPGGRALKFYASVRMDIRRIDSIKQGEEMIGNRTRVK 244
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYND-RNFRGKEAF 305
++KNK+APPFK A+F++ + +GIS++ IID+ +K + K+GA F+Y + R +G+E
Sbjct: 245 VIKNKIAPPFKQAEFDIMYNEGISKQGNIIDVGVKEEIVQKSGAWFSYGEIRLGQGRENA 304
Query: 306 KQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEE 346
KQ+L EN + E+ K+REK + K+ +T ++D++E+
Sbjct: 305 KQYLKENPDIEMEIETKIREKYELPLKKSKTNNDEKDNSEK 345
>gi|158521280|ref|YP_001529150.1| recA protein [Desulfococcus oleovorans Hxd3]
gi|158510106|gb|ABW67073.1| recA protein [Desulfococcus oleovorans Hxd3]
Length = 358
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 180/334 (53%), Positives = 252/334 (75%), Gaps = 4/334 (1%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVV 61
++K A++ A+ QI FGKG+IM LG T +VP +STGS ALD+ALG GGLP+GRV
Sbjct: 4 AEKTKAVESAITQIERQFGKGAIMKLGTG-TVINVPSISTGSIALDVALGVGGLPRGRVT 62
Query: 62 EIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCG 121
EIYG E+SGKTT+ALH +AEAQ++GG FIDAEHALD + A+ +GV T+ LL++QPD G
Sbjct: 63 EIYGQESSGKTTIALHTVAEAQKKGGIAAFIDAEHALDTAYAKKLGVNTDELLVSQPDTG 122
Query: 122 EQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSL 181
EQAL + D L+RSG++D++V+DSVAALVPK E++GEMGD+HM +QARLMSQALRKL+ +
Sbjct: 123 EQALEIADMLVRSGAIDILVIDSVAALVPKAEIEGEMGDSHMGLQARLMSQALRKLTGVI 182
Query: 182 SLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGS 241
+ T +IFINQ+R K+ F FG P E T GGNALKFYASVRL+I+R +K G+E +G+
Sbjct: 183 GKTNTSIIFINQIREKIGVF-FGNP-ETTPGGNALKFYASVRLDIRRSAAIKDGQEVVGN 240
Query: 242 QIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFR 300
++ VK+VKNK+APPFKT +F++ +G+GIS+ E++D+ +++ K+G+ ++YN +R +
Sbjct: 241 RVRVKVVKNKIAPPFKTVEFDMMYGEGISKTGELLDIGVENNIIEKSGSWYSYNGERIGQ 300
Query: 301 GKEAFKQFLVENESVREELVIKLREKLVVDHKEP 334
G+E KQF + V EL K+RE + + +P
Sbjct: 301 GRENVKQFFADKPEVFNELYAKVRESVGLAGGQP 334
>gi|383389243|gb|AFH09599.1| recombinase A [Aeromonas hydrophila]
Length = 354
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/326 (56%), Positives = 243/326 (74%), Gaps = 4/326 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGSIM LG S T + +STGS +LD+ALG GGLP GR+VEI
Sbjct: 5 KQKALAVALGQIEKQFGKGSIMRLGDSKT-MDIEAISTGSLSLDVALGIGGLPCGRIVEI 63
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIAEAQ++G C F+DAEHALDP A +GV ++LL++QPD GEQ
Sbjct: 64 YGPESSGKTTLTLQVIAEAQKKGKTCAFVDAEHALDPIYAAKLGVNVDDLLISQPDTGEQ 123
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RS +VDV++VDSVAAL PK E++GEMGD+H+ +QARLMSQALRKL+ ++
Sbjct: 124 ALEICDMLVRSNAVDVIIVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKN 183
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
+ + IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+G+E +G++
Sbjct: 184 ANCLCIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAIKEGDEVVGNET 241
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK A+F++ +G GIS+E E++DL +KHK KAGA ++YN +GK
Sbjct: 242 RVKVVKNKVAPPFKQAEFQIFYGAGISKEGELVDLGVKHKLIDKAGAWYSYNGEKIGQGK 301
Query: 303 EAFKQFLVENESVREELVIKLREKLV 328
+ EN+++ E+ +LRE L+
Sbjct: 302 ANVMKLFAENKAMAGEVEARLRELLL 327
>gi|312132580|ref|YP_003999919.1| reca [Bifidobacterium longum subsp. longum BBMN68]
gi|311773522|gb|ADQ03010.1| RecA [Bifidobacterium longum subsp. longum BBMN68]
Length = 418
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/323 (56%), Positives = 250/323 (77%), Gaps = 4/323 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K+ AL AL Q+ SFGKGS M LG ++V V+ TGS ALD+ALG GGLPKGR+VE
Sbjct: 43 KRKAALDTALAQVEKSFGKGSAMRLGDQ-PEQNVEVIPTGSLALDMALGIGGLPKGRIVE 101
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTLALHV+A AQ++GG +IDAEHALDP+ A +GV T++L+++QPD GE
Sbjct: 102 IYGPESSGKTTLALHVVANAQKKGGVSAYIDAEHALDPAYARKLGVDTDSLIVSQPDNGE 161
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D LIRSG++DV+V+DSVAALVPK E++GEMGD+H+ +QARLMSQALRK++ +L+
Sbjct: 162 QALEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKMTGALA 221
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ T IFINQ+R K+ F FG P E T GG ALKFYASVRL+I+RI +K G+E +G++
Sbjct: 222 QAGTTAIFINQLREKIGVF-FGNP-ETTTGGKALKFYASVRLDIRRIQTLKNGDEAVGNR 279
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRG 301
VK+VKNK+APPFK+A+F++ +G+GISRE +ID+A + K+G+ FTY D+ +G
Sbjct: 280 TRVKVVKNKMAPPFKSAEFDMLYGEGISREGSVIDMAQQVGVVKKSGSWFTYEGDQLGQG 339
Query: 302 KEAFKQFLVENESVREELVIKLR 324
+E +QFL +N ++ EE+ K++
Sbjct: 340 REKVRQFLKDNPAITEEIENKVK 362
>gi|209694225|ref|YP_002262153.1| recombinase A [Aliivibrio salmonicida LFI1238]
gi|226723624|sp|B6ENH8.1|RECA_ALISL RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|208008176|emb|CAQ78319.1| protein RecA (recombinase A) [Aliivibrio salmonicida LFI1238]
Length = 347
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 190/326 (58%), Positives = 240/326 (73%), Gaps = 4/326 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGSIM LG + T V VSTGS +LDIALG GGLP GR+VEI
Sbjct: 5 KKKALAAALGQIEKQFGKGSIMKLGDNRT-MDVETVSTGSLSLDIALGAGGLPMGRIVEI 63
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIA+AQ+ G C FIDAEHALDP A+ +GV + LL +QPD GEQ
Sbjct: 64 YGPESSGKTTLTLEVIAQAQKAGKTCAFIDAEHALDPIYAQKLGVDIDQLLCSQPDTGEQ 123
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL +VD L RSG+VD++VVDSVAAL PK E++GEMGD+HM +QAR++SQA+RKL+ +L
Sbjct: 124 ALEIVDALARSGAVDLIVVDSVAALTPKAEIEGEMGDSHMGLQARMLSQAMRKLTGNLKQ 183
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S + IFINQ+R K+ FG P E T GGNALKFYASVRL+I+R G VK G+E +G++
Sbjct: 184 SNCMCIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRTGAVKDGDEVVGNET 241
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGK 302
+K+VKNK+A PFK A+ ++ +GKG +RE E+IDL +KHK KAGA ++YN D+ +GK
Sbjct: 242 RIKVVKNKIAAPFKQAETQILYGKGFNREGELIDLGVKHKLVDKAGAWYSYNGDKIGQGK 301
Query: 303 EAFKQFLVENESVREELVIKLREKLV 328
+F+ EN + EL KLRE L+
Sbjct: 302 ANASKFMRENPEIGAELDKKLREMLL 327
>gi|423198293|ref|ZP_17184876.1| protein recA [Aeromonas hydrophila SSU]
gi|383389259|gb|AFH09607.1| recombinase A [Aeromonas hydrophila subsp. dhakensis]
gi|383389267|gb|AFH09611.1| recombinase A [Aeromonas hydrophila subsp. dhakensis]
gi|383389283|gb|AFH09619.1| recombinase A [Aeromonas aquariorum]
gi|404630417|gb|EKB27096.1| protein recA [Aeromonas hydrophila SSU]
Length = 354
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 189/347 (54%), Positives = 249/347 (71%), Gaps = 8/347 (2%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGSIM LG S T + +STGS +LD+ALG GGLP GR+VEI
Sbjct: 5 KQKALAAALGQIEKQFGKGSIMRLGDSKT-MDIEAISTGSLSLDVALGIGGLPCGRIVEI 63
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIAEAQ++G C F+DAEHALDP A +GV ++LL++QPD GEQ
Sbjct: 64 YGPESSGKTTLTLQVIAEAQKKGKTCAFVDAEHALDPIYAAKLGVNVDDLLISQPDTGEQ 123
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RS +VDV++VDSVAAL PK E++GEMGD+H+ +QARLMSQALRKL+ ++
Sbjct: 124 ALEICDMLVRSNAVDVIIVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKN 183
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
+ + IFINQ+R K+ FG P E T GGNALKFYASVRL+I+R G +K+G+E +G++
Sbjct: 184 ANCLCIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRTGAIKEGDEVVGNET 241
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK A+F++ +G GIS+E E++DL +KHK KAGA ++YN +GK
Sbjct: 242 RVKVVKNKVAPPFKQAEFQIFYGAGISKEGELVDLGVKHKLIDKAGAWYSYNGEKIGQGK 301
Query: 303 EAFKQFLVENESVREELVIKLREKLVVD----HKEPQTAVTDEDSTE 345
+ EN+++ E+ KLRE L+ ++P A DE E
Sbjct: 302 ANVMKLFAENKALAGEVEAKLRELLLSGAAPVEEKPSAAEYDEFEAE 348
>gi|213691840|ref|YP_002322426.1| recombinase A [Bifidobacterium longum subsp. infantis ATCC 15697 =
JCM 1222]
gi|384198983|ref|YP_005584726.1| recombinase RecA [Bifidobacterium longum subsp. infantis ATCC 15697
= JCM 1222]
gi|213523301|gb|ACJ52048.1| recA protein [Bifidobacterium longum subsp. infantis ATCC 15697 =
JCM 1222]
gi|320457935|dbj|BAJ68556.1| recombinase RecA [Bifidobacterium longum subsp. infantis ATCC 15697
= JCM 1222]
Length = 418
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/323 (56%), Positives = 250/323 (77%), Gaps = 4/323 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K+ AL AL Q+ SFGKGS M LG ++V V+ TGS ALD+ALG GGLPKGR+VE
Sbjct: 43 KRKAALDTALAQVEKSFGKGSAMRLGDQ-PEQNVEVIPTGSLALDMALGIGGLPKGRIVE 101
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTLALHV+A AQ++GG +IDAEHALDP+ A +GV T++L+++QPD GE
Sbjct: 102 IYGPESSGKTTLALHVVANAQKKGGVAAYIDAEHALDPAYARKLGVDTDSLIVSQPDNGE 161
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D LIRSG++DV+V+DSVAALVPK E++GEMGD+H+ +QARLMSQALRK++ +L+
Sbjct: 162 QALEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKMTGALA 221
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ T IFINQ+R K+ F FG P E T GG ALKFYASVRL+I+RI +K G+E +G++
Sbjct: 222 QAGTTAIFINQLREKIGVF-FGNP-ETTTGGKALKFYASVRLDIRRIQTLKNGDEAVGNR 279
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRG 301
VK+VKNK+APPFK+A+F++ +G+GISRE +ID+A + K+G+ FTY D+ +G
Sbjct: 280 TRVKVVKNKMAPPFKSAEFDMLYGEGISREGSVIDMAQQVGVVKKSGSWFTYEGDQLGQG 339
Query: 302 KEAFKQFLVENESVREELVIKLR 324
+E +QFL +N ++ EE+ K++
Sbjct: 340 REKVRQFLKDNPAITEEIENKVK 362
>gi|189426210|ref|YP_001953387.1| recombinase A [Geobacter lovleyi SZ]
gi|189422469|gb|ACD96867.1| recA protein [Geobacter lovleyi SZ]
Length = 336
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/326 (55%), Positives = 250/326 (76%), Gaps = 3/326 (0%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
MS K+ A++ AL QI FGKG+IM LG V +STG+ +LD+ALG GG+P+GRV
Sbjct: 1 MSDKNKAIELALSQIEKQFGKGAIMRLGNDEVLPGVESISTGAISLDLALGVGGVPRGRV 60
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+E+YGPE+SGKTTLALH++AEAQ+ GG F+DAEHALD + A +GVKT++LL++QPD
Sbjct: 61 IEVYGPESSGKTTLALHIVAEAQKSGGIAAFVDAEHALDINYARKLGVKTDDLLVSQPDT 120
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + +TL+RSG++DV+V+DSVAALVPK E++GEMGD+H+ +QARLMSQALRKL+
Sbjct: 121 GEQALEIAETLVRSGAIDVLVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTGI 180
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
+S S +IFINQ+R K+ FG P E T GGNALKFYASVRL+I++I +K+G++ IG
Sbjct: 181 ISKSNCCVIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRKIATLKQGDQVIG 238
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNF 299
S+ VK+VKNK+APPFK A+F++ +G+GISR +++DLA+ K+GA F+YN +R
Sbjct: 239 SRTRVKVVKNKVAPPFKEAEFDILYGEGISRTGDVLDLAVDRNIIDKSGAWFSYNKERIG 298
Query: 300 RGKEAFKQFLVENESVREELVIKLRE 325
+G+E +QFL EN + E+ +L E
Sbjct: 299 QGRENSRQFLKENPVMLAEIEARLME 324
>gi|46191337|ref|ZP_00206783.1| COG0468: RecA/RadA recombinase [Bifidobacterium longum DJO10A]
gi|189439147|ref|YP_001954228.1| recombinase A [Bifidobacterium longum DJO10A]
gi|227547654|ref|ZP_03977703.1| recombination protein A [Bifidobacterium longum subsp. longum ATCC
55813]
gi|317482460|ref|ZP_07941477.1| recA bacterial DNA recombination protein [Bifidobacterium sp.
12_1_47BFAA]
gi|322689410|ref|YP_004209144.1| recombinase RecA [Bifidobacterium longum subsp. infantis 157F]
gi|322691377|ref|YP_004220947.1| recombinase RecA [Bifidobacterium longum subsp. longum JCM 1217]
gi|419846676|ref|ZP_14369904.1| RecA protein [Bifidobacterium longum subsp. longum 1-6B]
gi|419855760|ref|ZP_14378510.1| RecA protein [Bifidobacterium longum subsp. longum 44B]
gi|189427582|gb|ACD97730.1| RecA/RadA recombinase [Bifidobacterium longum DJO10A]
gi|227211909|gb|EEI79805.1| recombination protein A [Bifidobacterium longum subsp. infantis
ATCC 55813]
gi|316916120|gb|EFV37525.1| recA bacterial DNA recombination protein [Bifidobacterium sp.
12_1_47BFAA]
gi|320456233|dbj|BAJ66855.1| recombinase RecA [Bifidobacterium longum subsp. longum JCM 1217]
gi|320460746|dbj|BAJ71366.1| recombinase RecA [Bifidobacterium longum subsp. infantis 157F]
gi|386413456|gb|EIJ28062.1| RecA protein [Bifidobacterium longum subsp. longum 1-6B]
gi|386414983|gb|EIJ29524.1| RecA protein [Bifidobacterium longum subsp. longum 44B]
Length = 418
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/323 (56%), Positives = 250/323 (77%), Gaps = 4/323 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K+ AL AL Q+ SFGKGS M LG ++V V+ TGS ALD+ALG GGLPKGR+VE
Sbjct: 43 KRKAALDTALAQVEKSFGKGSAMRLGDQ-PEQNVEVIPTGSLALDMALGIGGLPKGRIVE 101
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTLALHV+A AQ++GG +IDAEHALDP+ A +GV T++L+++QPD GE
Sbjct: 102 IYGPESSGKTTLALHVVANAQKKGGVAAYIDAEHALDPAYARKLGVDTDSLIVSQPDNGE 161
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D LIRSG++DV+V+DSVAALVPK E++GEMGD+H+ +QARLMSQALRK++ +L+
Sbjct: 162 QALEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKMTGALA 221
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ T IFINQ+R K+ F FG P E T GG ALKFYASVRL+I+RI +K G+E +G++
Sbjct: 222 QAGTTAIFINQLREKIGVF-FGNP-ETTTGGKALKFYASVRLDIRRIQTLKNGDEAVGNR 279
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRG 301
VK+VKNK+APPFK+A+F++ +G+GISRE +ID+A + K+G+ FTY D+ +G
Sbjct: 280 TRVKVVKNKMAPPFKSAEFDMLYGEGISREGSVIDMAQQVGVVKKSGSWFTYEGDQLGQG 339
Query: 302 KEAFKQFLVENESVREELVIKLR 324
+E +QFL +N ++ EE+ K++
Sbjct: 340 REKVRQFLKDNPAITEEIENKVK 362
>gi|238921102|ref|YP_002934617.1| protein RecA, putative [Edwardsiella ictaluri 93-146]
gi|259563335|sp|C5BGH6.1|RECA_EDWI9 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|238870671|gb|ACR70382.1| protein RecA, putative [Edwardsiella ictaluri 93-146]
Length = 353
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 187/330 (56%), Positives = 248/330 (75%), Gaps = 5/330 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + T + +STGS +LD+ALG GGLP GR+VE
Sbjct: 4 NKQRALAAALGQIEKQFGKGSIMRLGDTQT-LDIESISTGSLSLDVALGIGGLPMGRIVE 62
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
I+GPE+SGKTTL L VIA AQ G C FIDAEHALDP A +GV ++LL++QPD GE
Sbjct: 63 IFGPESSGKTTLTLSVIACAQAAGKTCAFIDAEHALDPIYAAKLGVNVDDLLVSQPDTGE 122
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L+RSG+VDV++VDSVAAL PK E++GEMGD+H+ +QARLMSQALRKL+ ++
Sbjct: 123 QALEICDALVRSGAVDVIIVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIK 182
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ +++FINQ+R K+ FG P E T GGNALKFY+SVRL+I+RIG +K+G+E +G++
Sbjct: 183 NANCLVVFINQIRMKIGVM-FGNP-ETTTGGNALKFYSSVRLDIRRIGAIKEGDEVVGNE 240
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+APPF+ A+F++ +G GIS+ESE+IDL +KHK K+GA ++YN D+ +G
Sbjct: 241 TRVKVVKNKVAPPFRQAEFQILYGAGISKESELIDLGVKHKLLDKSGAWYSYNGDKIGQG 300
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDH 331
K +FL EN ++ EL KLRE L++ H
Sbjct: 301 KANSMKFLQENTTISAELEGKLRE-LLLSH 329
>gi|323137974|ref|ZP_08073048.1| recA protein [Methylocystis sp. ATCC 49242]
gi|322396693|gb|EFX99220.1| recA protein [Methylocystis sp. ATCC 49242]
Length = 356
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/324 (56%), Positives = 237/324 (73%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI +FGKGSIM LG++ + +STGS LDIALG GGLP+GRVVEI
Sbjct: 16 KTKALDAALSQIERAFGKGSIMRLGKNQKAVEIETISTGSLGLDIALGVGGLPRGRVVEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL LHVIAEAQ+ GG C F+DAEHALDP A +GV E LL++QPD GEQ
Sbjct: 76 YGPESSGKTTLTLHVIAEAQKMGGVCAFVDAEHALDPVYARKLGVNLEELLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+VVDSVAAL P+ E++GEMGD +QARLMSQALRKL+ S++
Sbjct: 136 ALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDVQPGLQARLMSQALRKLTASIAR 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ +G P E T GGNALKFYASVRL+I+R G +K +E IG+Q
Sbjct: 196 SNTLVIFINQIRMKIGVM-YGSP-ETTTGGNALKFYASVRLDIRRTGSIKDRDEAIGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E+IDL +K K+GA F+Y+ + +G+
Sbjct: 254 RVKVVKNKVAPPFKQVEFDIMYGEGVSKVGELIDLGVKAGVVEKSGAWFSYDSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E K FL +N + +RE
Sbjct: 314 ENAKNFLRQNPEAAARIEQAIREN 337
>gi|209964227|ref|YP_002297142.1| recombinase A [Rhodospirillum centenum SW]
gi|226723637|sp|B6IS93.1|RECA_RHOCS RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|209957693|gb|ACI98329.1| RecA protein [Rhodospirillum centenum SW]
Length = 358
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/322 (56%), Positives = 240/322 (74%), Gaps = 3/322 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI +FGKGSIM LG +STGS LDIALG GGLP+GR+VEI
Sbjct: 15 KQKALDAALGQIERAFGKGSIMKLGAREAMAETEAISTGSLGLDIALGIGGLPRGRIVEI 74
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH IAEAQ+ GG C F+DAEHALDP+ A +GV + LL++QPD GEQ
Sbjct: 75 YGPESSGKTTLALHAIAEAQKAGGTCAFVDAEHALDPAYARKLGVDVDELLISQPDAGEQ 134
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+VVDSVAALVP+ EL+GEMGD+H+ + ARLMSQALRKL+ S+S
Sbjct: 135 ALEIADTLVRSGAIDVLVVDSVAALVPRAELEGEMGDSHVGLHARLMSQALRKLTGSISK 194
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+ ++IFINQ+R K+ FG P E T GGNALKFYAS+RL+I+RIG +K + +G+Q
Sbjct: 195 SRCLVIFINQIRLKIGVM-FGNP-ETTTGGNALKFYASIRLDIRRIGAIKDRDNVVGNQT 252
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPF+ +F++ +G+G+S+ E++DL ++ K+GA F+Y+ + +G+
Sbjct: 253 RVKVVKNKMAPPFRVVEFDIMYGEGVSKVGELLDLGIQAGVVEKSGAWFSYDGQRIGQGR 312
Query: 303 EAFKQFLVENESVREELVIKLR 324
E K FL N +V E + K+R
Sbjct: 313 ENAKTFLRNNAAVAEAIEAKVR 334
>gi|296139499|ref|YP_003646742.1| recA protein [Tsukamurella paurometabola DSM 20162]
gi|296027633|gb|ADG78403.1| recA protein [Tsukamurella paurometabola DSM 20162]
Length = 350
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/327 (55%), Positives = 251/327 (76%), Gaps = 4/327 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
++ AL+ AL QI ++GKGS+M LG V + + V+ TGS ALD+ALG GGLP+GRVVEI
Sbjct: 8 REKALELALAQIDKNYGKGSVMRLGDEVR-QPISVIPTGSIALDVALGIGGLPRGRVVEI 66
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ALH +AEAQ GG FIDAEHALDP A +GV T+ LL++QPD GEQ
Sbjct: 67 YGPESSGKTTVALHAVAEAQANGGIAAFIDAEHALDPDYAAKLGVDTDALLVSQPDTGEQ 126
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D LIRSG++D++V+DSVAALVPK E++GEMGD+H+ +QARLMSQALRK++ +++
Sbjct: 127 ALEIADMLIRSGALDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKMTGAMNN 186
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T IFINQ+R K+ FG P E T GG ALKFYASVRL+++RI +K G + +G++
Sbjct: 187 SGTTAIFINQLREKIGVM-FGSP-ETTTGGKALKFYASVRLDVRRIETLKDGTDAVGNRT 244
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGK 302
VK+VKNK++PPFK A+F++ +G+GISRE IID+ + F K+G+ +TY+ D+ +GK
Sbjct: 245 RVKVVKNKVSPPFKQAEFDIIYGQGISREGSIIDMGVNEGFIRKSGSWYTYDGDQLGQGK 304
Query: 303 EAFKQFLVENESVREELVIKLREKLVV 329
E ++FL+EN VR+E+ +++EKL V
Sbjct: 305 ENARKFLLENPDVRDEIEKRIKEKLGV 331
>gi|395782692|ref|ZP_10463064.1| protein recA [Bartonella rattimassiliensis 15908]
gi|395416570|gb|EJF82940.1| protein recA [Bartonella rattimassiliensis 15908]
Length = 347
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 189/324 (58%), Positives = 238/324 (73%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI SFGKGSIM LG+ + V TGS +LDIALG GGLPKGR+VEI
Sbjct: 3 KTKALNAALSQIERSFGKGSIMRLGQKEQVVEIETVPTGSLSLDIALGIGGLPKGRIVEI 62
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH IAEAQ+ GG C FIDAEHALDP A +GV ENL ++QPD GEQ
Sbjct: 63 YGPESSGKTTLALHAIAEAQKSGGVCAFIDAEHALDPIYARKLGVDLENLFISQPDTGEQ 122
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + +TL+RSG+VDV+VVDSVAAL P+ E+DGEMGDA +QARLMS+ALRKL+ S+
Sbjct: 123 ALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDALPGLQARLMSKALRKLTASIFR 182
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K + +G+Q
Sbjct: 183 SNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKDRDMIVGNQT 240
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G+GIS+ E+IDL +K K+G+ F+YN + +G+
Sbjct: 241 RVKVVKNKLAPPFKQVEFDIIYGEGISKLGELIDLGVKVGIVEKSGSWFSYNSQRLGQGR 300
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E KQFL E+ + E+ LR+
Sbjct: 301 ENVKQFLREHAEIATEIETALRQN 324
>gi|239628382|ref|ZP_04671413.1| recA protein [Clostridiales bacterium 1_7_47_FAA]
gi|239518528|gb|EEQ58394.1| recA protein [Clostridiales bacterium 1_7_47FAA]
Length = 389
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/321 (56%), Positives = 244/321 (76%), Gaps = 3/321 (0%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL AL QI ++GKGS+M LG S ++ V TGS +LDIALG GG+PKGR++E+YGP
Sbjct: 22 ALDAALTQIEKAYGKGSVMKLGDSRANMNIETVPTGSISLDIALGLGGVPKGRIIEVYGP 81
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTT+ALH++AE Q++GG FIDAEHALDP A+ IGV +NL ++QPD GEQAL
Sbjct: 82 ESSGKTTVALHMVAEVQKRGGIAGFIDAEHALDPVYAKNIGVDIDNLYISQPDNGEQALE 141
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ +T++RSG+VD+V+VDSVAALVPK E+DGEMGD+H+ +QARLMSQALRKL+ +S S
Sbjct: 142 ITETMVRSGAVDIVIVDSVAALVPKAEIDGEMGDSHVGLQARLMSQALRKLTAVISKSNC 201
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
I+IFINQ+R K+ FG P E T GG ALKFYASVRL+++RI +K+G E IG+++ VK
Sbjct: 202 IVIFINQLREKVGVM-FGNP-ETTTGGRALKFYASVRLDVRRIETLKQGGEVIGNRVRVK 259
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGKEAF 305
+VKNK+APPFK A+F++ FGKGIS+ +I+DLA+K K+GA F YN +G+E
Sbjct: 260 VVKNKIAPPFKEAEFDIMFGKGISKVGDILDLAVKENIIEKSGAWFAYNGSKIGQGRENS 319
Query: 306 KQFLVENESVREELVIKLREK 326
KQ+L +N + E+ K+R +
Sbjct: 320 KQYLSDNPEMCAEVEAKVRAR 340
>gi|294787000|ref|ZP_06752254.1| protein RecA [Parascardovia denticolens F0305]
gi|315226642|ref|ZP_07868430.1| recombination protein A [Parascardovia denticolens DSM 10105 = JCM
12538]
gi|294485833|gb|EFG33467.1| protein RecA [Parascardovia denticolens F0305]
gi|315120774|gb|EFT83906.1| recombination protein A [Parascardovia denticolens DSM 10105 = JCM
12538]
Length = 373
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 180/324 (55%), Positives = 246/324 (75%), Gaps = 4/324 (1%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVV 61
+++ AL AL Q+ +FGKGS M LG +HV V+ TGS ALD+ALG GGLP+GR+V
Sbjct: 13 ARRQAALDTALAQVEKTFGKGSAMRLGDKPV-QHVEVIPTGSLALDLALGIGGLPRGRIV 71
Query: 62 EIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCG 121
EIYGPE+SGKTT+ALH +A AQ+ GG FIDAEHALDP A +GV T++L+++QPD G
Sbjct: 72 EIYGPESSGKTTIALHAVANAQKAGGVAAFIDAEHALDPEYARKLGVDTDSLIISQPDNG 131
Query: 122 EQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSL 181
EQAL + D LIRSG++D++V+DSVAALVPK E+DGEMGD+H+ +QARLMSQALRK++ +L
Sbjct: 132 EQALEIADMLIRSGALDIIVIDSVAALVPKAEIDGEMGDSHVGLQARLMSQALRKMTGAL 191
Query: 182 SLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGS 241
S S T IFINQ+R K+ FG P E T GG ALKFYASVRL+I+RI +K G+E +G+
Sbjct: 192 SQSNTTAIFINQLREKIGVM-FGNP-ETTTGGKALKFYASVRLDIRRIQTLKNGDEAVGN 249
Query: 242 QIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFR 300
+ VK+VKNK+APPFK+A+F++ +G+G+SRE I+D+ L K+G+ FTY+ D+ +
Sbjct: 250 RTRVKVVKNKMAPPFKSAEFDILYGEGVSREGSILDMGLALGLVKKSGSWFTYDGDQLGQ 309
Query: 301 GKEAFKQFLVENESVREELVIKLR 324
G+E +QFL +N + +E+ K++
Sbjct: 310 GREKARQFLKDNPQLADEIETKVK 333
>gi|217979628|ref|YP_002363775.1| recA protein [Methylocella silvestris BL2]
gi|217505004|gb|ACK52413.1| recA protein [Methylocella silvestris BL2]
Length = 355
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 185/323 (57%), Positives = 242/323 (74%), Gaps = 3/323 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI +FGKGSIM LG++ + V TGS LD+ALG GGLP+GRVVEI
Sbjct: 16 KTKALDAALSQIERAFGKGSIMRLGKNQKVVEIETVPTGSLGLDVALGVGGLPRGRVVEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL LHVIAEAQ++GG C FIDAEHALD A +GV E+LL++QPD GEQ
Sbjct: 76 YGPESSGKTTLTLHVIAEAQKKGGVCAFIDAEHALDTIYARKLGVNLEDLLVSQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+V+DSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 136 ALEITDTLVRSGAVDVLVIDSVAALTPRAEIEGEMGDSQPGLQARLMSQALRKLTASISR 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ +G P E T GGNALKFYASVRL+I+RIG +K EE IG+Q
Sbjct: 196 SNTMVIFINQIRMKIGVM-YGSP-ETTTGGNALKFYASVRLDIRRIGSIKDHEEVIGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+GIS+ E+IDL +K K+GA F+Y+ + +G+
Sbjct: 254 RVKVVKNKVAPPFKQVEFDIMYGEGISKIGELIDLGVKAGVVEKSGAWFSYDSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLRE 325
E K FL + + +++ + +RE
Sbjct: 314 ENSKAFLKAHPEIADKIELAIRE 336
>gi|109453472|gb|ABG34216.1| RecA [Salmonella enterica subsp. houtenae]
gi|109453474|gb|ABG34217.1| RecA [Salmonella enterica subsp. houtenae]
gi|109453488|gb|ABG34224.1| RecA [Salmonella enterica subsp. houtenae]
Length = 353
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 194/347 (55%), Positives = 245/347 (70%), Gaps = 5/347 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV+VVDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+G+ +GS+
Sbjct: 185 QSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKEGDNVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +K K KAGA ++YN +G
Sbjct: 243 TRVKVVKNKIAAPFKQAEFQILYGEGINFYGELVDLGVKEKLIEKAGAWYSYNGEKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHK-EPQTAVTDEDSTEET 347
K +L EN S +E+ K+RE L+ + P AV D + ET
Sbjct: 303 KANATTWLKENPSTAKEIEKKVRELLLSNQNATPDFAVDDSEGVAET 349
>gi|440286458|ref|YP_007339223.1| protein RecA [Enterobacteriaceae bacterium strain FGI 57]
gi|440045980|gb|AGB77038.1| protein RecA [Enterobacteriaceae bacterium strain FGI 57]
Length = 354
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 194/343 (56%), Positives = 245/343 (71%), Gaps = 4/343 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG T V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRT-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV+VVDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALARSGAVDVLVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+G+ IGS+
Sbjct: 185 QSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKEGDNVIGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +K K KAGA ++YN D+ +G
Sbjct: 243 TRVKVVKNKIAAPFKQAEFQILYGEGINFLGELVDLGVKEKLIEKAGAWYSYNGDKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDST 344
K +L EN + +E+ K+RE L+ + V DE+ T
Sbjct: 303 KANAISWLKENPAAAKEIEKKVRELLLSNQDSSPDFVVDENDT 345
>gi|226366160|ref|YP_002783943.1| recombinase A [Rhodococcus opacus B4]
gi|254790443|sp|C1B381.1|RECA_RHOOB RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|226244650|dbj|BAH54998.1| RecA protein [Rhodococcus opacus B4]
Length = 348
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/325 (56%), Positives = 250/325 (76%), Gaps = 4/325 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
+D AL AL QI +FGKGS+M LG V + + V+ TGS +LD+ALG GGLP+GRVVEI
Sbjct: 8 RDKALDLALAQIDKNFGKGSVMRLGEGVR-QPIAVIPTGSISLDVALGIGGLPRGRVVEI 66
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ALH +A AQ GG FIDAEHALDP A+ +GV T+ LL++QPD GEQ
Sbjct: 67 YGPESSGKTTVALHAVANAQAAGGIAAFIDAEHALDPDYAQKLGVDTDALLVSQPDTGEQ 126
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D LIRSG++D++VVDSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ +LS
Sbjct: 127 ALEIADMLIRSGALDILVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTGALSN 186
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T IFINQ+R K+ FG P E T GG ALKFY+SVRL+++RI +K G + +G++
Sbjct: 187 SGTTAIFINQLREKIGVM-FGSP-ETTTGGKALKFYSSVRLDVRRIETLKDGTDAVGNRT 244
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRGK 302
VK+VKNK+APPFK A+F++ +G+GIS+E +ID+ ++H F K+G+ +TY D+ +GK
Sbjct: 245 RVKVVKNKVAPPFKQAEFDILYGQGISKEGSLIDMGVEHGFIRKSGSWYTYEGDQLGQGK 304
Query: 303 EAFKQFLVENESVREELVIKLREKL 327
E ++FL+EN +R+E+ K++EKL
Sbjct: 305 ENARKFLLENTDIRDEIEKKIKEKL 329
>gi|23099079|ref|NP_692545.1| recombinase A [Oceanobacillus iheyensis HTE831]
gi|30173249|sp|Q8CXG7.1|RECA_OCEIH RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|22777307|dbj|BAC13580.1| multifunctional protein involved in homologous recombination
(recombinase) [Oceanobacillus iheyensis HTE831]
Length = 347
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 190/355 (53%), Positives = 253/355 (71%), Gaps = 11/355 (3%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
MS + AL AL QI FGKGSIM +G + P+ + + +GS ALD+ALG GG P+GRV
Sbjct: 1 MSDRKQALDMALRQIEKQFGKGSIMKMGENEIPK-IATIPSGSLALDVALGIGGYPRGRV 59
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
VEIYGPE+SGKTT+ALH IAEAQ+QGG FIDAEHALDP A+ +GV + LLL+QPD
Sbjct: 60 VEIYGPESSGKTTVALHAIAEAQKQGGQAAFIDAEHALDPVYAKALGVNIDELLLSQPDT 119
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + + L+RSG+VD++VVDSVAALVPK E++GEMGD+H+ +QARLMSQALRKLS +
Sbjct: 120 GEQALEIAEALVRSGAVDIIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLSGA 179
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
++ S+T IFINQ+R K+ FG P E T GG ALKFY+SVRL ++R +K G + +G
Sbjct: 180 INKSKTTAIFINQIREKVGVM-FGNP-ETTPGGRALKFYSSVRLEVRRAETLKLGNDAVG 237
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNF 299
++ +K+VKNK+APPFK A+ ++ +GKGIS+E E++D+ K+GA ++Y NDR
Sbjct: 238 NKARIKVVKNKVAPPFKQAEVDIMYGKGISKEGEVLDIGSDLDIVMKSGAWYSYNNDRLG 297
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETVSTISPD 354
+G+E KQ+L E+E V E+ +R+ +D DED TEE S S D
Sbjct: 298 QGRENAKQYLKEHEEVLTEIHQSIRQHYELDK-------VDEDKTEEEASQESLD 345
>gi|171742631|ref|ZP_02918438.1| hypothetical protein BIFDEN_01744 [Bifidobacterium dentium ATCC
27678]
gi|171278245|gb|EDT45906.1| RecA protein [Bifidobacterium dentium ATCC 27678]
Length = 451
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 189/351 (53%), Positives = 259/351 (73%), Gaps = 6/351 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
++ AL+ AL Q+ +FGKGS M LG + V V+ TGS ALD+ALG GGLPKGR+VE
Sbjct: 88 RRQAALETALAQVEKNFGKGSAMRLG-DRPEQDVEVIPTGSLALDMALGIGGLPKGRIVE 146
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTLALHV+A AQ++GG FIDAEHALDP A +GV T++L+++QPD GE
Sbjct: 147 IYGPESSGKTTLALHVVANAQKKGGVAAFIDAEHALDPVYARKLGVDTDSLIVSQPDNGE 206
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D LIRSG++DV+V+DSVAALVPK E++GEMGD+H+ +QARLMSQALRK++ +L+
Sbjct: 207 QALEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKMTGALA 266
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ T IFINQ+R K+ F FG P E T GG ALKFYASVR++I+RI +K G+E +G++
Sbjct: 267 QAGTTAIFINQLREKIGVF-FGNP-ETTTGGKALKFYASVRMDIRRIQTIKNGDEAVGNR 324
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+APPFK+A+F++ +G+GIS+E ++D+AL+ K+G+ FTY+ D+ +G
Sbjct: 325 TRVKVVKNKMAPPFKSAEFDVLYGEGISKEGSVLDMALQVNVVKKSGSWFTYDGDQLGQG 384
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETVSTIS 352
+E +QFL +N V EE I+ R K EP ++ ET ++ S
Sbjct: 385 RENVRQFLKDNPGVTEE--IENRVKAAFGLIEPTDQFAEDGDGNETAASES 433
>gi|296104370|ref|YP_003614516.1| recombinase A [Enterobacter cloacae subsp. cloacae ATCC 13047]
gi|392980374|ref|YP_006478962.1| recombinase A [Enterobacter cloacae subsp. dissolvens SDM]
gi|295058829|gb|ADF63567.1| recombinase A [Enterobacter cloacae subsp. cloacae ATCC 13047]
gi|392326307|gb|AFM61260.1| recombinase A [Enterobacter cloacae subsp. dissolvens SDM]
Length = 352
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 195/346 (56%), Positives = 245/346 (70%), Gaps = 4/346 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG T V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRT-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV+VVDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+GE +GS+
Sbjct: 185 QSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKEGENVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +K K KAGA ++YN D+ +G
Sbjct: 243 TRVKVVKNKIAAPFKQAEFQILYGEGINFFGELVDLGVKEKLIEKAGAWYSYNGDKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEET 347
K +L EN + +E+ K+RE L+ + V D EET
Sbjct: 303 KANAISWLKENPAAAKEIEKKVRELLLNNQDSKPDFVVDGADAEET 348
>gi|421495588|ref|ZP_15942867.1| recombinase A [Aeromonas media WS]
gi|383389161|gb|AFH09558.1| recombinase A [Aeromonas bestiarum]
gi|407185414|gb|EKE59192.1| recombinase A [Aeromonas media WS]
Length = 353
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/339 (55%), Positives = 248/339 (73%), Gaps = 7/339 (2%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGSIM LG S T + +STGS +LD+ALG GGLP GR+VEI
Sbjct: 5 KQKALAAALGQIEKQFGKGSIMRLGDSKT-MDIEAISTGSLSLDVALGIGGLPCGRIVEI 63
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIAEAQ++G C F+DAEHALDP A +GV ++LL++QPD GEQ
Sbjct: 64 YGPESSGKTTLTLQVIAEAQKKGKTCAFVDAEHALDPIYAAKLGVNVDDLLISQPDTGEQ 123
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RS +VDV++VDSVAAL PK E++GEMGD+H+ +QARLMSQALRKL+ ++
Sbjct: 124 ALEICDMLVRSNAVDVIIVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKN 183
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
+ + IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+G+E +G++
Sbjct: 184 ANCLCIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAIKEGDEVVGNET 241
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK A+F++ +G GIS+E E++DL +KHK KAGA ++YN +GK
Sbjct: 242 RVKVVKNKVAPPFKQAEFQIFYGAGISKEGELVDLGVKHKLIDKAGAWYSYNGEKIGQGK 301
Query: 303 EAFKQFLVENESVREELVIKLREKLV---VDHKEPQTAV 338
+ EN+ + E+ +LRE L+ V ++P AV
Sbjct: 302 ANVMKLFAENKVMAAEVEARLRELLLSGAVPVEKPVAAV 340
>gi|292487291|ref|YP_003530163.1| recombinase A [Erwinia amylovora CFBP1430]
gi|292900338|ref|YP_003539707.1| recombinase A [Erwinia amylovora ATCC 49946]
gi|428784223|ref|ZP_19001715.1| Recombinase A [Erwinia amylovora ACW56400]
gi|291200186|emb|CBJ47314.1| RecA protein [Erwinia amylovora ATCC 49946]
gi|291552710|emb|CBA19755.1| Recombinase A [Erwinia amylovora CFBP1430]
gi|312171399|emb|CBX79658.1| Recombinase A [Erwinia amylovora ATCC BAA-2158]
gi|426277362|gb|EKV55088.1| Recombinase A [Erwinia amylovora ACW56400]
Length = 355
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 190/327 (58%), Positives = 241/327 (73%), Gaps = 4/327 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG T V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRT-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A+ +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQRKGKTCAFIDAEHALDPVYAKKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV++VDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALARSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+G+E +GS+
Sbjct: 185 NSGTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAIKEGDEVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +KHK KAGA ++YN D+ +G
Sbjct: 243 TRVKVVKNKVAAPFKQAEFQILYGEGINIFGELVDLGVKHKLIEKAGAWYSYNGDKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLV 328
K FL EN ++ E+ KLR L+
Sbjct: 303 KANAGNFLKENPAIANEIDAKLRAMLL 329
>gi|354596471|ref|ZP_09014488.1| Protein recA [Brenneria sp. EniD312]
gi|353674406|gb|EHD20439.1| Protein recA [Brenneria sp. EniD312]
Length = 356
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 190/331 (57%), Positives = 242/331 (73%), Gaps = 6/331 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A+ +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIASAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV++VDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+G+E +GS+
Sbjct: 185 QANTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGSIKEGDEVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +KHK KAGA ++YN +G
Sbjct: 243 TRVKVVKNKVAAPFKQAEFQILYGEGINIHGELVDLGVKHKLIEKAGAWYSYNGEKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHK 332
K FL EN ++ EL KLR+ L+ HK
Sbjct: 303 KANAGNFLKENPAIAAELDKKLRDMLL--HK 331
>gi|108804260|ref|YP_644197.1| recA protein [Rubrobacter xylanophilus DSM 9941]
gi|123177369|sp|Q1AW43.1|RECA_RUBXD RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|108765503|gb|ABG04385.1| RecA protein [Rubrobacter xylanophilus DSM 9941]
Length = 344
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 186/317 (58%), Positives = 239/317 (75%), Gaps = 4/317 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL A+ QI FGKGSIM +G + + V +STGS ALD+ALG GG+P+GR+VEI
Sbjct: 5 KSKALDTAVSQIERQFGKGSIMRMGDRASQK-VASISTGSLALDLALGVGGVPRGRIVEI 63
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
+GPE+SGKTTLALH+IAEAQR GG FIDAEHALDP+ AE IGV ENL +QPD GEQ
Sbjct: 64 FGPESSGKTTLALHIIAEAQRAGGLAAFIDAEHALDPTYAEAIGVDLENLYFSQPDSGEQ 123
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++D VV+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRKLS SLS
Sbjct: 124 ALEIADTLVRSGALDAVVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLSGSLSR 183
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T IFINQ+R K+ FG P E T GG ALKFYASVR++I+RIG +K G ET+G+Q
Sbjct: 184 SGTTAIFINQLREKIGVM-FGSP-ETTPGGRALKFYASVRMDIRRIGALKAGNETVGNQT 241
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGK 302
VKIVKNK+APPFK F++ +G+GISRE ++D+ ++ K+GA F Y +R +G+
Sbjct: 242 RVKIVKNKVAPPFKEVTFDIMYGEGISREGSLLDVGIEQGVIQKSGAWFAYGEERIGQGR 301
Query: 303 EAFKQFLVENESVREEL 319
E ++FL E+ +R+ +
Sbjct: 302 ENARKFLKEHPEIRDRI 318
>gi|109254803|emb|CAK22263.1| recombinase A [Ochrobactrum oryzae]
gi|148897703|emb|CAM18505.1| recombinase A [Ochrobactrum oryzae]
Length = 299
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/299 (60%), Positives = 232/299 (77%), Gaps = 3/299 (1%)
Query: 11 ALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASG 70
AL QI +FGKGSIM LG++ + VSTGS +LDIALG GGLPKGR+VEIYGPE+SG
Sbjct: 3 ALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIVEIYGPESSG 62
Query: 71 KTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSLVDT 130
KTTLALH IAEAQ++GG C F+DAEHALDP A +GV ENLL++QPD GEQAL + DT
Sbjct: 63 KTTLALHTIAEAQKRGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQALEITDT 122
Query: 131 LIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIF 190
L+RSG++DV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S S ++IF
Sbjct: 123 LVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISRSNCMVIF 182
Query: 191 INQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVKIVKN 250
INQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+ +E +G+Q VK+VKN
Sbjct: 183 INQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKERDEVVGNQTRVKVVKN 240
Query: 251 KLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGKEAFKQF 308
KLAPPFK +F++ +G G+S+ E+IDL +K K+GA F+YN + +G+E KQF
Sbjct: 241 KLAPPFKQVEFDIMYGAGVSKTGELIDLGVKAGVVEKSGAWFSYNSQRLGQGRENAKQF 299
>gi|59711142|ref|YP_203918.1| recombinase A [Vibrio fischeri ES114]
gi|197334505|ref|YP_002155292.1| recombinase A [Vibrio fischeri MJ11]
gi|423685249|ref|ZP_17660057.1| recombinase A [Vibrio fischeri SR5]
gi|76363346|sp|Q5E7G6.1|RECA_VIBF1 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|226726299|sp|B5FAD0.1|RECA_VIBFM RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|59479243|gb|AAW85030.1| DNA strand exchange and recombination protein with protease and
nuclease activity [Vibrio fischeri ES114]
gi|197315995|gb|ACH65442.1| protein RecA [Vibrio fischeri MJ11]
gi|371495750|gb|EHN71345.1| recombinase A [Vibrio fischeri SR5]
Length = 348
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/340 (56%), Positives = 246/340 (72%), Gaps = 5/340 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGSIM LG + T V VSTGS +LDIALG GGLP GR+VEI
Sbjct: 5 KKKALAAALGQIEKQFGKGSIMKLGDNRT-MDVETVSTGSLSLDIALGAGGLPMGRIVEI 63
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
+GPE+SGKTTL L +IA AQR+G C FIDAEHALDP A+ +GV + LL++QPD GEQ
Sbjct: 64 FGPESSGKTTLTLELIAAAQREGKTCAFIDAEHALDPVYAKKLGVNIDELLVSQPDTGEQ 123
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L RSG+VDV+V+DSVAAL PK E++GEMGD+HM +QAR++SQA+RKL+ +L
Sbjct: 124 ALEICDALARSGAVDVMVIDSVAALTPKAEIEGEMGDSHMGLQARMLSQAMRKLTGNLKQ 183
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S + IFINQ+R K+ FG P E T GGNALKFYASVRL+I+R G VK G+E +G++
Sbjct: 184 SNCMAIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRTGAVKDGDEVVGNET 241
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGK 302
+K+VKNK+A PFK A+ ++ +G+G +RE E+IDL +KHK KAGA ++YN D+ +GK
Sbjct: 242 RIKVVKNKIAAPFKQAETQIMYGQGFNREGELIDLGVKHKLVDKAGAWYSYNGDKIGQGK 301
Query: 303 EAFKQFLVENESVREELVIKLREKLVVDHKE-PQTAVTDE 341
+F+ EN V EL KLRE L+ +E P+T E
Sbjct: 302 ANASKFMRENTEVAAELDKKLREMLLTPAEEKPETDAAPE 341
>gi|411012061|ref|ZP_11388390.1| recombinase A [Aeromonas aquariorum AAK1]
gi|383389257|gb|AFH09606.1| recombinase A [Aeromonas hydrophila subsp. dhakensis]
gi|383389261|gb|AFH09608.1| recombinase A [Aeromonas hydrophila subsp. dhakensis]
gi|383389263|gb|AFH09609.1| recombinase A [Aeromonas hydrophila subsp. dhakensis]
gi|383389271|gb|AFH09613.1| recombinase A [Aeromonas hydrophila subsp. dhakensis]
gi|383389279|gb|AFH09617.1| recombinase A [Aeromonas aquariorum]
gi|383389281|gb|AFH09618.1| recombinase A [Aeromonas aquariorum]
Length = 354
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 189/347 (54%), Positives = 249/347 (71%), Gaps = 8/347 (2%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGSIM LG S T + +STGS +LD+ALG GGLP GR+VEI
Sbjct: 5 KQKALAAALGQIEKQFGKGSIMRLGDSKT-MDIEAISTGSLSLDVALGIGGLPCGRIVEI 63
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIAEAQ++G C F+DAEHALDP A +GV ++LL++QPD GEQ
Sbjct: 64 YGPESSGKTTLTLQVIAEAQKKGKTCAFVDAEHALDPIYAAKLGVNVDDLLISQPDTGEQ 123
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RS +VDV++VDSVAAL PK E++GEMGD+H+ +QARLMSQALRKL+ ++
Sbjct: 124 ALEICDMLVRSNAVDVIIVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKN 183
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
+ + IFINQ+R K+ FG P E T GGNALKFYASVRL+I+R G +K+G+E +G++
Sbjct: 184 ANCLCIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRTGAIKEGDEVVGNET 241
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK A+F++ +G GIS+E E++DL +KHK KAGA ++YN +GK
Sbjct: 242 RVKVVKNKVAPPFKQAEFQIFYGAGISKEGELVDLGVKHKLIDKAGAWYSYNGEKIGQGK 301
Query: 303 EAFKQFLVENESVREELVIKLREKLVVD----HKEPQTAVTDEDSTE 345
+ EN+++ E+ KLRE L+ ++P A DE E
Sbjct: 302 ANVMKLFSENKALAGEVEAKLRELLLSGAAPVEEKPSAAEYDEFEAE 348
>gi|403510991|ref|YP_006642629.1| protein RecA [Nocardiopsis alba ATCC BAA-2165]
gi|402801657|gb|AFR09067.1| protein RecA [Nocardiopsis alba ATCC BAA-2165]
Length = 373
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/327 (55%), Positives = 245/327 (74%), Gaps = 4/327 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
+D AL+ AL QI FGKGS+M LG P + + TG+ ALD+ALG GGLPKGRVVEI
Sbjct: 6 RDKALETALAQIERQFGKGSVMRLGDDDRP-PIEAIPTGAIALDVALGIGGLPKGRVVEI 64
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ALH +A AQ+QGG F+DAEHALDP A+ IGV T++LLL+QPD GEQ
Sbjct: 65 YGPESSGKTTVALHAVANAQKQGGIAAFVDAEHALDPEYAKKIGVNTDDLLLSQPDTGEQ 124
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL +VD LIRSG++ ++V+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ +L+
Sbjct: 125 ALEIVDMLIRSGAISIIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKIAGALNS 184
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
+ T IFINQ+R K+ FG P E T GG ALKFYASVRL+++RI +K G + +G++
Sbjct: 185 TGTTAIFINQLREKVGVM-FGSP-ETTSGGRALKFYASVRLDVRRIETLKDGTDAVGNRT 242
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK A+F++ +G G+SRE +IDL ++H K+GA +TY +GK
Sbjct: 243 RVKVVKNKVAPPFKQAEFDILYGVGVSREGSLIDLGVEHGIVRKSGAWYTYEGTQLGQGK 302
Query: 303 EAFKQFLVENESVREELVIKLREKLVV 329
E ++FL EN + E+ K++EKL V
Sbjct: 303 ENARKFLRENVDMSNEVEKKIKEKLGV 329
>gi|365971797|ref|YP_004953358.1| recombinase A [Enterobacter cloacae EcWSU1]
gi|365750710|gb|AEW74937.1| RecA [Enterobacter cloacae EcWSU1]
Length = 357
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 194/346 (56%), Positives = 245/346 (70%), Gaps = 4/346 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 11 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 69
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A +GV +NLL +QPD GE
Sbjct: 70 IYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGE 129
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV+VVDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 130 QALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 189
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+GE +GS+
Sbjct: 190 QSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKEGENVVGSE 247
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +K K KAGA ++YN D+ +G
Sbjct: 248 TRVKVVKNKIAAPFKQAEFQILYGEGINFYGELVDLGVKEKLIEKAGAWYSYNGDKIGQG 307
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEET 347
K +L EN + +E+ K+RE L+ + V D EET
Sbjct: 308 KANAISWLKENPAAAKEIEKKVRELLLNNQDGTPDFVVDNAGAEET 353
>gi|271501701|ref|YP_003334727.1| recA protein [Dickeya dadantii Ech586]
gi|270345256|gb|ACZ78021.1| recA protein [Dickeya dadantii Ech586]
Length = 360
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 193/331 (58%), Positives = 243/331 (73%), Gaps = 6/331 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGVGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A+ +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV++VDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALARSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+GEE +GS+
Sbjct: 185 QSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGSIKEGEEVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +K K KAGA ++YN D+ +G
Sbjct: 243 TRVKVVKNKVAAPFKQAEFQILYGEGINTFGELVDLGVKSKLIEKAGAWYSYNGDKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHK 332
K FL EN ++ EL KLRE L+ HK
Sbjct: 303 KANACNFLKENPAISAELDKKLRELLL--HK 331
>gi|451942153|ref|YP_007462790.1| recombinase A [Bartonella vinsonii subsp. berkhoffii str. Winnie]
gi|451901540|gb|AGF76002.1| recombinase A [Bartonella vinsonii subsp. berkhoffii str. Winnie]
Length = 347
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 187/321 (58%), Positives = 237/321 (73%), Gaps = 3/321 (0%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL AL QI SFGKGSIM LG+ + + TGS +LDIALG GGLPKGR+VEIYGP
Sbjct: 6 ALDAALSQIERSFGKGSIMRLGQKEQVVEIETIPTGSLSLDIALGIGGLPKGRIVEIYGP 65
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTTLALH IAEAQ+ GG C FIDAEHALDP A +GV ENL ++QPD GEQAL
Sbjct: 66 ESSGKTTLALHAIAEAQKNGGVCAFIDAEHALDPIYARKLGVDLENLFISQPDTGEQALE 125
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ +TL+RSG+VDV+VVDSVAAL P+ E+DGEMGDA +QARLMS+ALRKL+ S+ S
Sbjct: 126 ITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDALPGLQARLMSKALRKLTASIFRSNC 185
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
+++FINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K + +G+Q VK
Sbjct: 186 MVVFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKDRDAIVGNQTRVK 243
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGKEAF 305
+VKNKLAPPFK +F++ +G+GIS+ E+IDL +K K+GA F+YN + +G+E
Sbjct: 244 VVKNKLAPPFKQVEFDIIYGEGISKVGELIDLGVKVGIVEKSGAWFSYNSQRLGQGRENA 303
Query: 306 KQFLVENESVREELVIKLREK 326
KQFL E+ + E+ LR+
Sbjct: 304 KQFLREHAEIATEIETALRQN 324
>gi|335040835|ref|ZP_08533956.1| Protein recA [Caldalkalibacillus thermarum TA2.A1]
gi|334179270|gb|EGL81914.1| Protein recA [Caldalkalibacillus thermarum TA2.A1]
Length = 352
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 185/348 (53%), Positives = 250/348 (71%), Gaps = 6/348 (1%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
MS + AL AL QI FGKGSIM LG + V +S+GS ALDIALG GG P+GR+
Sbjct: 2 MSDRRAALDMALRQIEKQFGKGSIMKLGEAAVNNQVSTISSGSLALDIALGVGGYPRGRI 61
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
VEIYGPE+SGKTT+ALH IAEAQ+ GG FIDAEHALDP A+ +GV + LLL+QPD
Sbjct: 62 VEIYGPESSGKTTVALHAIAEAQKMGGQAAFIDAEHALDPQYAKNLGVNIDELLLSQPDT 121
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + + L+RSG++D++V+DSVAALVPK E++GEMGD+H+ +QARLMSQALRKLS +
Sbjct: 122 GEQALEIAEALVRSGAIDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLSGA 181
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
+S S+TI IFINQ+R K+ FG P E T GG ALKFYAS+RL+++R +K+G + IG
Sbjct: 182 ISKSKTIAIFINQIREKVGVM-FGNP-ETTPGGRALKFYASIRLDVRRAETIKQGNDLIG 239
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF- 299
++ +K+VKNK+APPFK+ ++ +G+GISRE ++D+A K+GA ++YND+
Sbjct: 240 NKTKIKVVKNKVAPPFKSCDVDIMYGEGISREGSVLDMASDLDIIQKSGAWYSYNDQRLG 299
Query: 300 RGKEAFKQFLVENESVREELVIKLREKL---VVDHKEPQTAVTDEDST 344
+G+E KQ+LVE+ + E+ K+R+ V + E Q E+ T
Sbjct: 300 QGRENAKQYLVEHPDLCLEIENKIRQHFGLEAVTYPENQNQEVKEELT 347
>gi|1172889|sp|P42447.1|RECA_RHOCA RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|558631|emb|CAA57673.1| recA [Rhodobacter capsulatus]
gi|1581748|prf||2117248A recA gene
Length = 355
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/346 (55%), Positives = 249/346 (71%), Gaps = 6/346 (1%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVV 61
+ K AL+ AL QI FGKGSIM LG P + STGS LDIALG GGLPKGR+V
Sbjct: 15 ADKQKALECALAQIERQFGKGSIMKLGGDTPPPEIEATSTGSLGLDIALGIGGLPKGRIV 74
Query: 62 EIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCG 121
EIYGPE+SGKTTL LH IAE Q++GG C F+DAEHALDP A+ +GV E+LL++QPD G
Sbjct: 75 EIYGPESSGKTTLTLHCIAEEQKKGGVCAFVDAEHALDPYYAKKLGVSLEDLLISQPDTG 134
Query: 122 EQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSL 181
EQAL +VDTL+RSG+V +VVVDSVAAL PK E++G+MGDA + QARLMSQA+RKL+ S+
Sbjct: 135 EQALEIVDTLVRSGAVSLVVVDSVAALTPKAEIEGDMGDATVGAQARLMSQAMRKLTASI 194
Query: 182 SLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGS 241
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+R G +K +E IG+
Sbjct: 195 GRSNCMVIFINQIRMKIGVM-FGSP-ETTSGGNALKFYASVRLDIRRTGAIKDRDEVIGN 252
Query: 242 QIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYND-RNFR 300
Q VK+VKNK+APPF+ +F++ +G+GIS+ E++DL +K +K+GA ++Y D R +
Sbjct: 253 QTRVKVVKNKVAPPFREVEFDILYGEGISKVGELVDLGVKAGVVAKSGAWYSYGDERIGQ 312
Query: 301 GKEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEE 346
G+E KQFL +N + E+ K+R ++ TA ED TEE
Sbjct: 313 GRENAKQFLRDNPDIAYEIEDKIRASHGLEFGVDPTA---EDLTEE 355
>gi|331007036|ref|ZP_08330270.1| RecA protein [gamma proteobacterium IMCC1989]
gi|330419163|gb|EGG93595.1| RecA protein [gamma proteobacterium IMCC1989]
Length = 377
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/333 (54%), Positives = 244/333 (73%), Gaps = 4/333 (1%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVV 61
S KD AL+ AL QI FGKG++M +G + +P +STGS LDIALG GGLPKGR+
Sbjct: 32 SNKDKALEAALSQIERQFGKGTVMRMGDKELVK-IPAISTGSLGLDIALGIGGLPKGRIA 90
Query: 62 EIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCG 121
EIYGPE+SGKTTL L VIAEAQ+QGG C FIDAEHALDP AE +GV ++L+++QPD G
Sbjct: 91 EIYGPESSGKTTLTLQVIAEAQKQGGTCAFIDAEHALDPVYAEKLGVNVDDLIISQPDTG 150
Query: 122 EQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSL 181
EQAL + D L+RSG+VDV+V+DSVAAL PK E++G+MGD H+ +QARLMSQALRK++ ++
Sbjct: 151 EQALEVADMLVRSGAVDVIVIDSVAALTPKAEIEGDMGDHHVGLQARLMSQALRKITGNI 210
Query: 182 SLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGS 241
+ + IFINQ+R K+ FG P E T GGNALKFY+SVRL+I+RIG VK+GE+ +GS
Sbjct: 211 KNANCLCIFINQIRMKIGVM-FGNP-ETTTGGNALKFYSSVRLDIRRIGAVKEGEDIVGS 268
Query: 242 QIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-R 300
+ VK+VKNK+APPFK +F++ +G+GI+R E+ID +K + KAGA ++Y +
Sbjct: 269 ETRVKVVKNKVAPPFKQTEFQIMYGRGINRLGEVIDYGVKLELIDKAGAWYSYKGEKIGQ 328
Query: 301 GKEAFKQFLVENESVREELVIKLREKLVVDHKE 333
GK +FL E + EE+ + +R + + D E
Sbjct: 329 GKNNVIKFLQERPEIAEEVELAIRREFLPDTVE 361
>gi|383389231|gb|AFH09593.1| recombinase A [Aeromonas hydrophila]
Length = 354
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/326 (56%), Positives = 242/326 (74%), Gaps = 4/326 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGSIM LG S T + +STGS +LD+ALG GGLP GR+VEI
Sbjct: 5 KQKALAAALGQIEKQFGKGSIMRLGDSKT-MDIEAISTGSLSLDVALGIGGLPCGRIVEI 63
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIAEAQ++G C F+DAEHALDP A +GV ++LL++QPD GEQ
Sbjct: 64 YGPESSGKTTLTLQVIAEAQKKGKTCAFVDAEHALDPIYAAKLGVNVDDLLISQPDTGEQ 123
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RS +VDV++VDSVAAL PK E++GEMGD+H+ +QARLMSQALRKL+ ++
Sbjct: 124 ALEICDMLVRSNAVDVIIVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKN 183
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
+ + IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+G+E +G++
Sbjct: 184 ANCLCIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAIKEGDEVVGNET 241
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK A+F++ +G GIS+E E++DL +KHK KAGA ++YN +GK
Sbjct: 242 RVKVVKNKVAPPFKQAEFQIFYGAGISKEGELVDLGVKHKLIDKAGAWYSYNGEKIGQGK 301
Query: 303 EAFKQFLVENESVREELVIKLREKLV 328
+ EN+ + E+ +LRE L+
Sbjct: 302 ANVMKLFAENKVMAGEVEARLRELLL 327
>gi|330831304|ref|YP_004394256.1| recombinase A [Aeromonas veronii B565]
gi|406675470|ref|ZP_11082659.1| protein recA [Aeromonas veronii AMC35]
gi|423208043|ref|ZP_17194597.1| protein recA [Aeromonas veronii AER397]
gi|328806440|gb|AEB51639.1| recombinase A [Aeromonas veronii B565]
gi|404619679|gb|EKB16588.1| protein recA [Aeromonas veronii AER397]
gi|404627802|gb|EKB24602.1| protein recA [Aeromonas veronii AMC35]
Length = 354
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/326 (56%), Positives = 242/326 (74%), Gaps = 4/326 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGSIM LG S T + +STGS +LD+ALG GGLP GR+VEI
Sbjct: 5 KQKALAAALGQIEKQFGKGSIMRLGDSKT-MDIEAISTGSLSLDVALGIGGLPCGRIVEI 63
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIAEAQ++G C F+DAEHALDP A +GV ++LL++QPD GEQ
Sbjct: 64 YGPESSGKTTLTLQVIAEAQKKGKTCAFVDAEHALDPIYAAKLGVNVDDLLISQPDTGEQ 123
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RS +VDV++VDSVAAL PK E++GEMGD+H+ +QARLMSQALRKL+ ++
Sbjct: 124 ALEICDMLVRSNAVDVIIVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKN 183
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
+ + IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+G+E +G++
Sbjct: 184 ANCLCIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAIKEGDEVVGNET 241
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK A+F++ +G GIS+E E++DL +KHK KAGA ++YN +GK
Sbjct: 242 RVKVVKNKVAPPFKQAEFQIFYGAGISKEGELVDLGVKHKLIDKAGAWYSYNGEKIGQGK 301
Query: 303 EAFKQFLVENESVREELVIKLREKLV 328
+ EN+ + E+ +LRE L+
Sbjct: 302 ANVMKLFAENKVMAGEVEARLRELLL 327
>gi|419850084|ref|ZP_14373100.1| RecA protein [Bifidobacterium longum subsp. longum 35B]
gi|419853863|ref|ZP_14376663.1| RecA protein [Bifidobacterium longum subsp. longum 2-2B]
gi|386406437|gb|EIJ21444.1| RecA protein [Bifidobacterium longum subsp. longum 2-2B]
gi|386410139|gb|EIJ24941.1| RecA protein [Bifidobacterium longum subsp. longum 35B]
Length = 418
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/323 (56%), Positives = 250/323 (77%), Gaps = 4/323 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K+ AL AL Q+ SFGKGS M LG ++V V+ TGS ALD+ALG GGLPKGR+VE
Sbjct: 43 KRKAALDTALAQVEKSFGKGSAMRLGDQ-PEQNVEVIPTGSLALDMALGIGGLPKGRIVE 101
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTLALHV+A AQ++GG +IDAEHALDP+ A +GV T++L+++QPD GE
Sbjct: 102 IYGPESSGKTTLALHVVANAQKKGGVAAYIDAEHALDPAYARKLGVDTDSLIVSQPDNGE 161
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D LIRSG++D++V+DSVAALVPK E++GEMGD+H+ +QARLMSQALRK++ +L+
Sbjct: 162 QALEIADMLIRSGALDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKMTGALA 221
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ T IFINQ+R K+ F FG P E T GG ALKFYASVRL+I+RI +K G+E +G++
Sbjct: 222 QAGTTAIFINQLREKIGVF-FGNP-ETTTGGKALKFYASVRLDIRRIQTLKNGDEAVGNR 279
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRG 301
VK+VKNK+APPFK+A+F++ +G+GISRE +ID+A + K+G+ FTY D+ +G
Sbjct: 280 TRVKVVKNKMAPPFKSAEFDMLYGEGISREGSVIDMAQQVGVVKKSGSWFTYEGDQLGQG 339
Query: 302 KEAFKQFLVENESVREELVIKLR 324
+E +QFL +N ++ EE+ K++
Sbjct: 340 REKVRQFLKDNPAITEEIENKVK 362
>gi|408500864|ref|YP_006864783.1| recA protein [Bifidobacterium asteroides PRL2011]
gi|408465688|gb|AFU71217.1| recA protein [Bifidobacterium asteroides PRL2011]
Length = 384
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 190/361 (52%), Positives = 261/361 (72%), Gaps = 11/361 (3%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
++ AL AL Q+ SFGKGS M LG + V V+ TGS ALD+ALG GGLP+GR+VE
Sbjct: 21 RRQAALNTALAQVEKSFGKGSAMRLGDKPA-QDVEVIPTGSLALDMALGIGGLPRGRIVE 79
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTLALH +A AQ GG FIDAEHALDP A+ +GV T++L+++QPD GE
Sbjct: 80 IYGPESSGKTTLALHAVANAQAGGGVAAFIDAEHALDPEYAKKLGVDTDSLIVSQPDNGE 139
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D LIRSG++DV+V+DSVAALVPK E++G+MGD+H+ +QARLMSQALRK++ +LS
Sbjct: 140 QALEIADMLIRSGALDVIVIDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKMTGALS 199
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ T IFINQ+R K+ F FG P E T GG ALKFYASVRL+I+RI +K G+E +G++
Sbjct: 200 QANTTAIFINQLREKIGVF-FGSP-ETTTGGKALKFYASVRLDIRRIQTLKNGDEAVGNR 257
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRG 301
VK+VKNK+APPFK A+F++ +G+GIS+E ++D+AL+ K+G+ FTY D+ +G
Sbjct: 258 TKVKVVKNKMAPPFKVAEFDILYGEGISKEGSVLDMALQTNIVKKSGSWFTYEGDQLGQG 317
Query: 302 KEAFKQFLVENESVREELVIKLREKLVV------DHKEPQTAVTDEDSTEETVSTISPDS 355
+E +QFL +N + +E+ K++ + D K QT D+DS E+ + + +S
Sbjct: 318 RENVRQFLKDNPGLTKEIEDKVKVAFGLIPAPSEDDKADQTDA-DQDSKEDDSAPVDINS 376
Query: 356 T 356
T
Sbjct: 377 T 377
>gi|254427618|ref|ZP_05041325.1| protein RecA [Alcanivorax sp. DG881]
gi|196193787|gb|EDX88746.1| protein RecA [Alcanivorax sp. DG881]
Length = 344
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 179/331 (54%), Positives = 250/331 (75%), Gaps = 4/331 (1%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
MS K AL AL QI FGKGS+M +G R +P +STGS LD+ALG GGLPKGR+
Sbjct: 1 MSDKGKALSAALSQIERQFGKGSVMRMGDRKRER-MPSISTGSLGLDVALGIGGLPKGRI 59
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
VEIYGPE+SGKTTL L VIA+AQ++G C F+DAEHALDP AE +GV ++L+++QPD
Sbjct: 60 VEIYGPESSGKTTLTLSVIAQAQKKGATCAFVDAEHALDPDYAEKLGVNVDDLIVSQPDT 119
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + D L+RSG+VDVV+VDSVAALVPK E++GEMGD H+ +QARLMSQALRK++ +
Sbjct: 120 GEQALEITDMLVRSGAVDVVIVDSVAALVPKAEIEGEMGDTHVGLQARLMSQALRKITGN 179
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
+ + T+++FINQ+R K+ FG P E T GGNALKFY+SVRL+I+RIG VK+G+E G
Sbjct: 180 VKNANTLVVFINQIRMKIGVM-FGNP-ETTTGGNALKFYSSVRLDIRRIGAVKQGDEVTG 237
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNF 299
++ VK+VKNK++PPF+ A+F++ +G+GI++ E++DL ++ K+GA + Y D+
Sbjct: 238 NETRVKVVKNKVSPPFRQAEFQILYGQGINQLGEVLDLGVQQGLVDKSGAWYAYKGDKIG 297
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVD 330
+GK+ ++L EN ++ EE+ ++R +L+ D
Sbjct: 298 QGKQNACEYLRENPAIAEEIETEIRARLLPD 328
>gi|24374940|ref|NP_718983.1| recombinase A RecA [Shewanella oneidensis MR-1]
gi|30173289|sp|Q8EBS0.1|RECA_SHEON RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|24349655|gb|AAN56427.1| recombinase A RecA [Shewanella oneidensis MR-1]
Length = 357
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 185/347 (53%), Positives = 250/347 (72%), Gaps = 4/347 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K+ AL L QI FGKGSIM LG + V +STGS +LD+ALG GGLP GR+VE
Sbjct: 6 NKEKALAAVLSQIEKQFGKGSIMKLGEDRS-MDVETISTGSLSLDVALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A+ +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLEVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV++VDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+R G +K+G+E +G++
Sbjct: 185 QSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRTGAIKEGDEVVGNE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+R E++DL + HK KAGA ++Y D+ +G
Sbjct: 243 TRVKVVKNKVAAPFKQAEFQILYGQGINRTGELVDLGVAHKLIEKAGAWYSYKGDKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETV 348
+ ++L EN ++ E+ LRE L+ + ++ +D+D+ E +
Sbjct: 303 RANAGKYLTENPAIAAEIDKTLRELLLSNPSALASSASDDDNVEGNI 349
>gi|409390149|ref|ZP_11241920.1| protein RecA [Gordonia rubripertincta NBRC 101908]
gi|403199976|dbj|GAB85154.1| protein RecA [Gordonia rubripertincta NBRC 101908]
Length = 347
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/325 (56%), Positives = 249/325 (76%), Gaps = 4/325 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
++ AL AL QI +FGKGS+M LG T + + ++ TGS ALD+ALG GGLP+GRVVEI
Sbjct: 8 REKALDLALAQIDKNFGKGSVMRLGEE-TRQPIEIIPTGSIALDVALGIGGLPRGRVVEI 66
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ALH +A AQ QGG FIDAEHALDP A +GV T+ LL++QPD GEQ
Sbjct: 67 YGPESSGKTTVALHAVANAQAQGGIAAFIDAEHALDPDYAAKLGVDTDALLVSQPDTGEQ 126
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D LIRSG++D++V+DSVAALVPK E++GEMGD+H+ +QARLMSQALRK++ +LS
Sbjct: 127 ALEIADMLIRSGALDILVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKMTSALSQ 186
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+T IFINQ+R K+ FG P E T GG ALKFY+SVRL+++RI +K G + +G++
Sbjct: 187 SKTTAIFINQLREKIGVM-FGSP-ETTTGGKALKFYSSVRLDVRRIETLKDGTDAVGNRT 244
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRGK 302
VK+VKNK+APPFK A+F++ +G+GIS+E +ID+ + F K+G+ FTY D+ +GK
Sbjct: 245 RVKVVKNKVAPPFKQAEFDILYGQGISKEGSLIDMGVAEGFIRKSGSWFTYEGDQLGQGK 304
Query: 303 EAFKQFLVENESVREELVIKLREKL 327
E ++FL+EN +R+E+ K++EKL
Sbjct: 305 ENARKFLLENVDIRDEIEKKIKEKL 329
>gi|359768118|ref|ZP_09271898.1| protein RecA [Gordonia polyisoprenivorans NBRC 16320]
gi|378717615|ref|YP_005282504.1| protein RecA [Gordonia polyisoprenivorans VH2]
gi|359314695|dbj|GAB24731.1| protein RecA [Gordonia polyisoprenivorans NBRC 16320]
gi|375752318|gb|AFA73138.1| protein RecA [Gordonia polyisoprenivorans VH2]
Length = 347
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/325 (56%), Positives = 248/325 (76%), Gaps = 4/325 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
++ AL AL QI +FGKGS+M LG T + + V+ TGS ALD+ALG GGLP+GRVVEI
Sbjct: 8 REKALDLALAQIDKNFGKGSVMRLGEE-TRQPIEVIPTGSIALDVALGIGGLPRGRVVEI 66
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ALH +A AQ QGG FIDAEHALDP A +GV + LL++QPD GEQ
Sbjct: 67 YGPESSGKTTVALHAVANAQAQGGIAAFIDAEHALDPDYAAKLGVDVDALLVSQPDTGEQ 126
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D LIRSG++D++V+DSVAALVPK E++GEMGD+H+ +QARLMSQALRK++ +LS
Sbjct: 127 ALEIADMLIRSGALDILVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKMTSALSN 186
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T IFINQ+R K+ FG P E T GG ALKFY+SVRL+++RI +K G + +G++
Sbjct: 187 SNTTAIFINQLREKIGVM-FGSP-ETTTGGKALKFYSSVRLDVRRIETLKDGTDAVGNRT 244
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRGK 302
VK+VKNK+APPFK A+F++ +G+GIS+E +ID+ + F K+G+ FTY D+ +GK
Sbjct: 245 RVKVVKNKVAPPFKQAEFDILYGQGISKEGSLIDMGVAEGFIRKSGSWFTYEGDQLGQGK 304
Query: 303 EAFKQFLVENESVREELVIKLREKL 327
E ++FL+EN+ +R+E+ K++EKL
Sbjct: 305 ENARKFLLENDDIRDEIEKKIKEKL 329
>gi|319786626|ref|YP_004146101.1| recA protein [Pseudoxanthomonas suwonensis 11-1]
gi|317465138|gb|ADV26870.1| recA protein [Pseudoxanthomonas suwonensis 11-1]
Length = 341
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 193/326 (59%), Positives = 239/326 (73%), Gaps = 4/326 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLG-RSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGS+M +G R V P V V+ TGS LDIALG GGLPKGRVVE
Sbjct: 5 KKRALAAALSQIEKQFGKGSVMRMGDRVVEP--VEVIPTGSLMLDIALGIGGLPKGRVVE 62
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L IAE Q+QGG FIDAEHALDP A +GVK ++LLL+QPD GE
Sbjct: 63 IYGPESSGKTTLTLQAIAECQKQGGTAAFIDAEHALDPIYAAKLGVKVDDLLLSQPDTGE 122
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L+RSGSVD++VVDSVAAL PK E++GEMGD +QARLMSQALRKL+ ++
Sbjct: 123 QALEIADMLVRSGSVDILVVDSVAALTPKAEIEGEMGDQLPGLQARLMSQALRKLTGNIK 182
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T++IFINQ+R K+ G E T GGNALKFYASVRL+I+RIG +KKG+E IG+Q
Sbjct: 183 RSNTLVIFINQLRHKIGVMMPGQSPETTTGGNALKFYASVRLDIRRIGSIKKGDEIIGNQ 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRG 301
+K+VKNKLAPPFK E+ +G+GISRE E+ID+ + K K+GA ++Y ++R +G
Sbjct: 243 TKIKVVKNKLAPPFKQIVTEILYGEGISREGELIDMGVDAKIVEKSGAWYSYGSERIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKL 327
K+ +Q+L EN V L +LREK
Sbjct: 303 KDNSRQYLRENPEVAARLEGELREKF 328
>gi|417942042|ref|ZP_12585319.1| Protein RecA (Recombinase A) [Bifidobacterium breve CECT 7263]
gi|376167427|gb|EHS86263.1| Protein RecA (Recombinase A) [Bifidobacterium breve CECT 7263]
Length = 416
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/323 (56%), Positives = 250/323 (77%), Gaps = 4/323 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K+ AL AL Q+ +FGKGS M LG ++V V+ TGS ALD+ALG GGLPKGR+VE
Sbjct: 44 KRKAALDTALAQVEKNFGKGSAMRLGDQPV-QNVEVIPTGSLALDMALGIGGLPKGRIVE 102
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTLALHV+A AQ++GG +IDAEHALDP+ A +GV T++L+++QPD GE
Sbjct: 103 IYGPESSGKTTLALHVVANAQKKGGVAAYIDAEHALDPAYARKLGVDTDSLIVSQPDNGE 162
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D LIRSG++DV+V+DSVAALVPK E++GEMGD+H+ +QARLMSQALRK++ +L+
Sbjct: 163 QALEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKMTGALA 222
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ T IFINQ+R K+ F FG P E T GG ALKFYASVRL+I+RI +K G+E +G++
Sbjct: 223 QAGTTAIFINQLREKIGVF-FGNP-ETTTGGKALKFYASVRLDIRRIQTLKNGDEAVGNR 280
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRG 301
VK+VKNK+APPFK+A+F++ +G+GISRE +ID+A + K+G+ FTY D+ +G
Sbjct: 281 TRVKVVKNKMAPPFKSAEFDMLYGEGISREGSVIDMAQQVGVVKKSGSWFTYEGDQLGQG 340
Query: 302 KEAFKQFLVENESVREELVIKLR 324
+E +QFL +N ++ EE+ K++
Sbjct: 341 REKVRQFLKDNPAITEEIENKVK 363
>gi|395790914|ref|ZP_10470373.1| protein recA [Bartonella alsatica IBS 382]
gi|395409210|gb|EJF75809.1| protein recA [Bartonella alsatica IBS 382]
Length = 347
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 193/347 (55%), Positives = 249/347 (71%), Gaps = 4/347 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI SFGKGSIM LG+ + + TGS +LDIALG GGLPKGR+VEI
Sbjct: 3 KTKALDAALLQIERSFGKGSIMRLGQKEQVVEIETIPTGSLSLDIALGVGGLPKGRIVEI 62
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH IAEAQ+ GG C FIDAEHALDP A +GV ENL ++QPD GEQ
Sbjct: 63 YGPESSGKTTLALHAIAEAQKNGGVCAFIDAEHALDPIYARKLGVDLENLFISQPDTGEQ 122
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + +TL+RSG+VDV+VVDSVAAL P+ E+DGEMGDA +QARLMS+ALRKL+ S+
Sbjct: 123 ALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDALPGLQARLMSKALRKLTASIFR 182
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K + +G+Q
Sbjct: 183 SNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKDRDMIVGNQT 240
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G+GIS+ E+IDL +K K+GA F+YN + +G+
Sbjct: 241 RVKVVKNKLAPPFKQVEFDIIYGEGISKLGELIDLGVKVGIVEKSGAWFSYNSQRLGQGR 300
Query: 303 EAFKQFLVENESVREELVIKLREKL-VVDHKEPQTAVTDEDSTEETV 348
E KQFL E+ + E+ LR+ ++ + + A TD ++E +
Sbjct: 301 ENAKQFLREHAEIATEIETALRQNAGLIAIELLENAGTDNTESDEVI 347
>gi|377571712|ref|ZP_09800818.1| protein RecA [Gordonia terrae NBRC 100016]
gi|377531099|dbj|GAB45983.1| protein RecA [Gordonia terrae NBRC 100016]
Length = 347
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/325 (56%), Positives = 249/325 (76%), Gaps = 4/325 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
++ AL AL QI +FGKGS+M LG T + + ++ TGS ALD+ALG GGLP+GRVVEI
Sbjct: 8 REKALDLALAQIDKNFGKGSVMRLGEE-TRQPIEIIPTGSIALDVALGIGGLPRGRVVEI 66
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ALH +A AQ QGG FIDAEHALDP A +GV T+ LL++QPD GEQ
Sbjct: 67 YGPESSGKTTVALHAVANAQAQGGIAAFIDAEHALDPDYAAKLGVDTDALLVSQPDTGEQ 126
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D LIRSG++D++V+DSVAALVPK E++GEMGD+H+ +QARLMSQALRK++ +LS
Sbjct: 127 ALEIADMLIRSGALDILVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKMTSALSQ 186
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+T IFINQ+R K+ FG P E T GG ALKFY+SVRL+++RI +K G + +G++
Sbjct: 187 SKTTAIFINQLREKIGVM-FGSP-ETTTGGKALKFYSSVRLDVRRIETLKDGTDAVGNRT 244
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRGK 302
VK+VKNK+APPFK A+F++ +G+GIS+E +ID+ + F K+G+ FTY D+ +GK
Sbjct: 245 RVKVVKNKVAPPFKQAEFDILYGQGISKEGSLIDMGVAEGFIRKSGSWFTYEGDQLGQGK 304
Query: 303 EAFKQFLVENESVREELVIKLREKL 327
E ++FL+EN +R+E+ K++EKL
Sbjct: 305 ENARKFLLENVDIRDEIEKKIKEKL 329
>gi|421850101|ref|ZP_16283069.1| DNA recombinase RecA [Acetobacter pasteurianus NBRC 101655]
gi|371459097|dbj|GAB28272.1| DNA recombinase RecA [Acetobacter pasteurianus NBRC 101655]
Length = 344
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/321 (56%), Positives = 248/321 (77%), Gaps = 6/321 (1%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPR-HVPVVSTGSFALDIALGTGGLPKGRVVEIYG 65
AL+ AL QI +FGKGS+M LG+ P+ V+ TGS LDIALG GGLP+GRVVEIYG
Sbjct: 9 ALEGALGQIERAFGKGSVMRLGQR--PKVEADVIPTGSLGLDIALGIGGLPRGRVVEIYG 66
Query: 66 PEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQAL 125
PE+SGKTTLALH IAEAQ++GG C FIDAEHALDPS A+ +GV +NLL++QPD GEQAL
Sbjct: 67 PESSGKTTLALHAIAEAQKRGGTCAFIDAEHALDPSYAKKLGVDVDNLLISQPDTGEQAL 126
Query: 126 SLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQ 185
+ DTL+RSG++DV+VVDSVAALVP+ EL+G+MGD+H+ + ARLMSQALRKL+ +++ S
Sbjct: 127 EIADTLVRSGAIDVLVVDSVAALVPRAELEGDMGDSHVGLHARLMSQALRKLTGTVARSN 186
Query: 186 TILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAV 245
T++IF+NQ+R K+ FG P E T GGNALKFY+SVR++I+RIG +K +E G+Q V
Sbjct: 187 TLMIFLNQIRLKIGVM-FGNP-ETTTGGNALKFYSSVRMDIRRIGSIKDKDEVTGNQTRV 244
Query: 246 KIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGKEA 304
K+VKNK+APPF+ +F++ +G+GIS+ E+IDL +K K+GA F+Y+ + +G+E
Sbjct: 245 KVVKNKMAPPFRQVEFDIMYGEGISKVGELIDLGVKAGVVEKSGAWFSYDSQRIGQGREN 304
Query: 305 FKQFLVENESVREELVIKLRE 325
KQFL ++ + ++ ++RE
Sbjct: 305 AKQFLRDHPEMAADIERRVRE 325
>gi|1785950|gb|AAB41053.1| RecA [Aeromonas salmonicida]
Length = 353
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 190/346 (54%), Positives = 249/346 (71%), Gaps = 7/346 (2%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGSIM LG S T + +STGS +LD+ALG GGLP GR+VEI
Sbjct: 5 KQKALAAALGQIEKQFGKGSIMLLGDSKT-MDIEAISTGSLSLDVALGIGGLPCGRIVEI 63
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIAEAQ++G C FIDAEHALDP A +GV ++LL++Q D GEQ
Sbjct: 64 YGPESSGKTTLTLQVIAEAQKKGKVCAFIDAEHALDPIYAAKLGVNVDDLLISQSDTGEQ 123
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RS +VDV++VDSVAAL PK E++GEMGD+H+ +QARLMSQALRKL+ ++
Sbjct: 124 ALEICDMLVRSNAVDVIIVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKN 183
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
+ + IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+G+E +G++
Sbjct: 184 ANCLCIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAIKEGDEVVGNET 241
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK A+F++ +G GIS+E E++DL +KHK KAGA ++YN +GK
Sbjct: 242 RVKVVKNKVAPPFKQAEFQIFYGVGISKEGELVDLGVKHKLIDKAGAWYSYNGEKIGQGK 301
Query: 303 EAFKQFLVENESVREELVIKLREKLV---VDHKEPQTAVTDEDSTE 345
+ EN+ + E+ +LRE L+ V ++P A DE E
Sbjct: 302 ANVMKLFTENKVMAAEVEARLRELLLSGDVPAEKPVVADADELEAE 347
>gi|408826435|ref|ZP_11211325.1| recombinase A [Streptomyces somaliensis DSM 40738]
Length = 376
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 187/341 (54%), Positives = 256/341 (75%), Gaps = 7/341 (2%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLG-RSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
+ ++ AL AL QI FGKG++M +G RS P + V+ TGS ALD+ALG GGLP+GRV
Sbjct: 4 TDREKALDAALAQIERQFGKGAVMRMGERSREP--IEVIPTGSTALDVALGVGGLPRGRV 61
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
VEIYGPE+SGKTTL LH +A AQ+ GG F+DAEHALDP A+ +GV +NL+L+QPD
Sbjct: 62 VEIYGPESSGKTTLTLHAVANAQKAGGQVAFVDAEHALDPEYAQKLGVDIDNLILSQPDN 121
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL +VD L+RSG++D++V+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ +
Sbjct: 122 GEQALEIVDMLVRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITSA 181
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
L+ S+T IFINQ+R K+ FG P E T GG ALKFYASVR++I+RI +K G + +G
Sbjct: 182 LNQSKTTAIFINQLREKIGVM-FGSP-ETTTGGRALKFYASVRIDIRRIETLKDGTDAVG 239
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNF 299
++ K+VKNK+APPFK A+F++ +G+GISRE +ID+ ++H F KAGA +TY D+
Sbjct: 240 NRTRCKVVKNKVAPPFKQAEFDILYGQGISREGGLIDMGVEHGFIRKAGAWYTYEGDQLG 299
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTD 340
+GKE + FL +N + E+ K++EKL V + P TAVT+
Sbjct: 300 QGKENARNFLKDNPDLANEIEKKIKEKLGVGVR-PDTAVTE 339
>gi|6225929|sp|Q9ZIQ0.1|RECA_RHOVI RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|3769371|gb|AAC64504.1| RecA protein [Blastochloris viridis]
Length = 348
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/331 (56%), Positives = 245/331 (74%), Gaps = 5/331 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI +FGKGSIM LG+S V +STGS LDIALG GGLP+GRVVEI
Sbjct: 3 KTKALDAALTQIERAFGKGSIMRLGKSGAALEVETISTGSLGLDIALGIGGLPRGRVVEI 62
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
+GPE+SGKTTLALH +AEAQ++GG C FIDAEHALDP A +GV ++LL++QPD GEQ
Sbjct: 63 FGPESSGKTTLALHTVAEAQKKGGVCAFIDAEHALDPLYARKLGVNLDDLLISQPDAGEQ 122
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+VVDSVAALVP+ EL+GEMGD+ MQARLMSQALRKL+ S+S
Sbjct: 123 ALEIADTLVRSGAIDVLVVDSVAALVPRAELEGEMGDSQPGMQARLMSQALRKLTASISR 182
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ +G P E T GGNALKFYASVRL+I+RIG +K+ +E +G+Q
Sbjct: 183 SNCMVIFINQIRMKIGVM-YGSP-ETTTGGNALKFYASVRLDIRRIGAIKERDEVVGNQT 240
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G+GIS+ E+IDL +K K+G+ F+++ + +G+
Sbjct: 241 RVKVVKNKLAPPFKQVEFDIMYGEGISKAGELIDLGVKAGVVDKSGSWFSHDSQRIGQGR 300
Query: 303 EAFKQFLVENESV--REELVIKLREKLVVDH 331
E K FL + V R E I+ L+ +
Sbjct: 301 ENVKGFLKGHPDVAGRIEAAIRQNAGLIAER 331
>gi|456064161|ref|YP_007503131.1| recA protein [beta proteobacterium CB]
gi|455441458|gb|AGG34396.1| recA protein [beta proteobacterium CB]
Length = 362
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/344 (54%), Positives = 250/344 (72%), Gaps = 5/344 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGSIM LG + + + VVS+GS LDIALG GGL +GRV+EI
Sbjct: 21 KQKALTAALAQIEKQFGKGSIMRLGDAEIHQDIQVVSSGSLGLDIALGVGGLARGRVIEI 80
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL LH IAE Q+ GG C FIDAEHALD A +GV NLL++QPD GEQ
Sbjct: 81 YGPESSGKTTLTLHAIAEMQKIGGTCAFIDAEHALDVQYASRLGVDVNNLLISQPDTGEQ 140
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RSGS+D++V+DSVAALVP+ E++G+MGD+ +QARLMSQALRKL+ ++
Sbjct: 141 ALEIADALVRSGSIDLIVIDSVAALVPRAEIEGDMGDSLPGLQARLMSQALRKLTGAIKR 200
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
+ T +IFINQ+R K+ FG P E T GGNALKFYAS+RL+I+RIG +KKG+E +G++
Sbjct: 201 TNTTVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASMRLDIRRIGSIKKGDEVVGNET 258
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGK 302
VK+VKNK++PPF+ A F++ +G GISRE EIID+ ++ K+G+ + YN DR +GK
Sbjct: 259 RVKVVKNKVSPPFREAIFDIMYGAGISREGEIIDMGVEADIVEKSGSWYAYNGDRIGQGK 318
Query: 303 EAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEE 346
+ ++FL EN ++ +++ K+R KL V K V+D S EE
Sbjct: 319 DNVREFLKENPAIAQDIESKIRAKLGV--KAGTAVVSDVLSEEE 360
>gi|418719317|ref|ZP_13278517.1| RecA protein [Leptospira borgpetersenii str. UI 09149]
gi|418739064|ref|ZP_13295457.1| RecA protein [Leptospira borgpetersenii serovar Castellonis str.
200801910]
gi|421094221|ref|ZP_15554941.1| RecA protein [Leptospira borgpetersenii str. 200801926]
gi|410362947|gb|EKP13980.1| RecA protein [Leptospira borgpetersenii str. 200801926]
gi|410744470|gb|EKQ93211.1| RecA protein [Leptospira borgpetersenii str. UI 09149]
gi|410745762|gb|EKQ98672.1| RecA protein [Leptospira borgpetersenii serovar Castellonis str.
200801910]
gi|456887765|gb|EMF98778.1| RecA protein [Leptospira borgpetersenii str. 200701203]
Length = 367
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 177/313 (56%), Positives = 241/313 (76%), Gaps = 3/313 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K LA++QA++QI FGKGSIM LG + + V V+ +GS LDIALG GG P GR+VEI
Sbjct: 20 KKLAIEQAMNQIEKQFGKGSIMKLGSDTSKQTVQVIPSGSLDLDIALGIGGYPIGRIVEI 79
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L IAEAQ++GG FIDAEHALDPS A+ +GV + LL++QPD GE+
Sbjct: 80 YGPESSGKTTLTLSAIAEAQKRGGVAAFIDAEHALDPSYAKKLGVNIDELLVSQPDNGEE 139
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + ++L+RS ++D++V+DSVAALVPK E++G+MGD+HM +QARLMSQALRKL+ +++
Sbjct: 140 ALEICESLVRSNAIDLIVIDSVAALVPKAEIEGDMGDSHMGLQARLMSQALRKLTGTIAK 199
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+T++IFINQ+R K+ FG P E T GGNALKFY SVRL+I++I +K+ EE++G+++
Sbjct: 200 SKTVVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYCSVRLDIRKIETIKEKEESVGNRV 257
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK APPFK A+F++ F GISRES ++DL +KH KAGA ++YN +GK
Sbjct: 258 RVKVVKNKCAPPFKQAEFDIIFNAGISRESSLVDLGVKHDIIHKAGAWYSYNTEKIGQGK 317
Query: 303 EAFKQFLVENESV 315
EA K++L N +
Sbjct: 318 EAAKEYLKNNPEI 330
>gi|315282275|ref|ZP_07870719.1| protein RecA [Listeria marthii FSL S4-120]
gi|313614088|gb|EFR87788.1| protein RecA [Listeria marthii FSL S4-120]
Length = 347
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/353 (51%), Positives = 262/353 (74%), Gaps = 11/353 (3%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
M+ + AL QAL QI FGKGSIM LG + +++ +S+GS ALDIALG GG P+GR+
Sbjct: 1 MNDRQAALDQALKQIEKQFGKGSIMKLGEH-SDQNISTISSGSLALDIALGVGGYPRGRI 59
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+E+YGPE+SGKTT+ALH IAE Q QGG FIDAEHALDP+ A+ +GV + LLL+QPD
Sbjct: 60 IEVYGPESSGKTTVALHAIAEVQAQGGTAAFIDAEHALDPAYAKNLGVNIDELLLSQPDT 119
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + + L+RSG+VD++V+DSVAALVP+ E++GEMGDAH+ +QARLMSQALRKLS
Sbjct: 120 GEQALEIAEALVRSGAVDMLVIDSVAALVPRAEIEGEMGDAHVGLQARLMSQALRKLSGV 179
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
++ S+TI IFINQ+R K+ FG P E+T GG ALKFY++VRL ++R +K+G + +G
Sbjct: 180 INKSKTIAIFINQIREKVGVM-FGNP-EITPGGRALKFYSTVRLEVRRAEQLKQGTDVMG 237
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF- 299
++ +K+VKNK+APPF+ A+ ++ +G+GISRE E++D+A + +K+G+ ++Y +
Sbjct: 238 NKTKIKVVKNKVAPPFRIAEVDIMYGEGISREGELVDMAAEVDVINKSGSWYSYKEERIG 297
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVD-HKEPQTAVTDEDSTEETVSTI 351
+G+E KQ+L E+ +R+E+ ++RE+ +D +KEP D EET+S +
Sbjct: 298 QGRENAKQYLKEHTDIRDEISKRVREEYEIDGNKEPL------DENEETLSLL 344
>gi|315303074|ref|ZP_07873776.1| protein RecA [Listeria ivanovii FSL F6-596]
gi|347548783|ref|YP_004855111.1| putative Recombination protein recA [Listeria ivanovii subsp.
ivanovii PAM 55]
gi|38258435|sp|Q83TH2.1|RECA_LISIV RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|30265993|gb|AAN15812.1| RecA [Listeria ivanovii]
gi|30265995|gb|AAN15813.1| RecA [Listeria ivanovii]
gi|313628555|gb|EFR96986.1| protein RecA [Listeria ivanovii FSL F6-596]
gi|346981854|emb|CBW85827.1| Putative Recombination protein recA [Listeria ivanovii subsp.
ivanovii PAM 55]
Length = 348
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/354 (51%), Positives = 263/354 (74%), Gaps = 12/354 (3%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
M+ + AL QAL QI FGKGSIM LG + +++ +S+GS ALDIALG GG P+GR+
Sbjct: 1 MNDRQAALDQALKQIEKQFGKGSIMKLGEH-SDQNISTISSGSLALDIALGVGGYPRGRI 59
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+E+YGPE+SGKTT+ALH IAE Q QGG FIDAEHALDP+ A+ +GV + LLL+QPD
Sbjct: 60 IEVYGPESSGKTTVALHAIAEVQAQGGTAAFIDAEHALDPAYAKNLGVNIDELLLSQPDT 119
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + + L+RSG+VD++V+DSVAALVP+ E++GEMGDAH+ +QARLMSQALRKLS +
Sbjct: 120 GEQALEIAEALVRSGAVDMLVIDSVAALVPRAEIEGEMGDAHVGLQARLMSQALRKLSGA 179
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
++ S+TI IFINQ+R K+ FG P E+T GG ALKFY++VRL ++R +K+G + +G
Sbjct: 180 INKSKTIAIFINQIREKVGVM-FGNP-EITPGGRALKFYSTVRLEVRRAEQLKQGTDVMG 237
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF- 299
++ +K+VKNK+APPF+ A+ ++ +G+GISRE E++D+A + +K+G+ ++Y +
Sbjct: 238 NKTKIKVVKNKVAPPFRIAEVDIMYGEGISREGELVDMAAEVDVINKSGSWYSYKEERIG 297
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVD--HKEPQTAVTDEDSTEETVSTI 351
+G+E KQ+L E+ +R+E+ ++RE+ +D +KEP TEET+S +
Sbjct: 298 QGRENAKQYLKEHTDIRDEISKRVREEYEIDGSNKEPLA------ETEETLSLL 345
>gi|347540647|ref|YP_004848072.1| recombinase A [Pseudogulbenkiania sp. NH8B]
gi|345643825|dbj|BAK77658.1| RecA protein [Pseudogulbenkiania sp. NH8B]
Length = 351
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/337 (54%), Positives = 252/337 (74%), Gaps = 8/337 (2%)
Query: 14 QITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASGKTT 73
QI FGKGSIM + + ++ V+STGS LD+ALG GGLP+GRVVEIYGPE+SGKTT
Sbjct: 18 QIEKQFGKGSIMRMSDNQITENLQVISTGSLGLDLALGVGGLPRGRVVEIYGPESSGKTT 77
Query: 74 LALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSLVDTLIR 133
L L V+AEAQ+ GG C +IDAE+ALDP+ A+ +GV E+LL++QPD GEQAL + D L+R
Sbjct: 78 LCLQVVAEAQKLGGTCAYIDAENALDPTYAQKLGVNVEDLLISQPDTGEQALEICDMLVR 137
Query: 134 SGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFINQ 193
S VDV+VVDSVAALVPK E++GEMGD H+ + ARLMSQALRKL+ ++ + T++IFINQ
Sbjct: 138 SSGVDVIVVDSVAALVPKAEIEGEMGDNHVGLHARLMSQALRKLTGNIKRTNTLVIFINQ 197
Query: 194 VRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVKIVKNKLA 253
+R K+ FG P E T GGNALKFYASVRL+I+RIG +KKGEE IG++ VK+VKNK++
Sbjct: 198 IRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGGIKKGEEIIGNETRVKVVKNKVS 255
Query: 254 PPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGKEAFKQFLVEN 312
PPF+ A F++ +G+GISRE EI++L ++H F K+GA ++YN + +GK+ + +L +N
Sbjct: 256 PPFRQAGFDILYGEGISREGEIVELGVEHGFVEKSGAWYSYNGQKIGQGKDNTRLWLKDN 315
Query: 313 ESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETVS 349
++ E+ K+RE + ++ A+T+ EE ++
Sbjct: 316 PAIAREIEGKIREAVGIN-----VAITEGQPEEEELA 347
>gi|415721004|ref|ZP_11468248.1| recombinase A [Gardnerella vaginalis 00703Bmash]
gi|415724612|ref|ZP_11469990.1| recombinase A [Gardnerella vaginalis 00703C2mash]
gi|388061265|gb|EIK83922.1| recombinase A [Gardnerella vaginalis 00703Bmash]
gi|388062408|gb|EIK85025.1| recombinase A [Gardnerella vaginalis 00703C2mash]
Length = 385
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 185/350 (52%), Positives = 255/350 (72%), Gaps = 5/350 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
++ AL+ AL + +GKGS M LG + V V+ TGS ALD+ALG GG+P+GR+VE
Sbjct: 22 RRKAALEMALANVEKQYGKGSAMRLGDKPL-QDVEVIPTGSLALDMALGIGGVPRGRIVE 80
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
+YGPE+SGKTTLALH++A AQ+ GG FIDAEHALDP A +GV T++L+++QPD GE
Sbjct: 81 VYGPESSGKTTLALHIVANAQKNGGVAAFIDAEHALDPVYARKLGVDTDSLIVSQPDNGE 140
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D LIRSG++DV+VVDSVAALVPK E+DG+MGD+H+ +QARLMSQALRK++ +LS
Sbjct: 141 QALEIADMLIRSGALDVIVVDSVAALVPKAEIDGDMGDSHVGLQARLMSQALRKMTGALS 200
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ T IFINQ+R K+ F FG P E T GG ALKFY+SVR++I+R+ +K GEE +G++
Sbjct: 201 QAGTTAIFINQLREKIGVF-FGNP-ETTTGGKALKFYSSVRMDIRRVSTIKNGEEAVGNR 258
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VKIVKNK+APPFKTA+F++ +G+GIS E +ID+A++ K+G+ FTY +G
Sbjct: 259 TKVKIVKNKMAPPFKTAEFDVLYGEGISTEGSVIDMAVQCDVIKKSGSWFTYEGEQLGQG 318
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQ-TAVTDEDSTEETVST 350
+E +QFL +N ++ EE+ K++ + E Q V DED +E+ S
Sbjct: 319 RENVRQFLKDNPAITEEISDKVKVAFGLMKPEDQFVEVEDEDDSEKAKSN 368
>gi|359726520|ref|ZP_09265216.1| recombinase A [Leptospira weilii str. 2006001855]
Length = 404
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 177/313 (56%), Positives = 241/313 (76%), Gaps = 3/313 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K LA++QA++QI FGKGSIM LG + + V V+ +GS LDIALG GG P GR+VEI
Sbjct: 59 KKLAIEQAMNQIEKQFGKGSIMKLGSDTSKQTVQVIPSGSLDLDIALGIGGYPIGRIVEI 118
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L IAEAQ++GG FIDAEHALDPS A+ +GV + LL++QPD GE+
Sbjct: 119 YGPESSGKTTLTLSAIAEAQKRGGVAAFIDAEHALDPSYAKKLGVNIDELLVSQPDNGEE 178
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + ++L+RS ++D++V+DSVAALVPK E++G+MGD+HM +QARLMSQALRKL+ +++
Sbjct: 179 ALEICESLVRSNAIDLIVIDSVAALVPKAEIEGDMGDSHMGLQARLMSQALRKLTGTIAK 238
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+T++IFINQ+R K+ FG P E T GGNALKFY SVRL+I++I +K+ EE++G+++
Sbjct: 239 SKTVVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYCSVRLDIRKIETIKEKEESVGNRV 296
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK APPFK A+F++ F GISRES ++DL +KH KAGA ++YN +GK
Sbjct: 297 RVKVVKNKCAPPFKQAEFDVIFNAGISRESSLVDLGVKHDIIHKAGAWYSYNTEKIGQGK 356
Query: 303 EAFKQFLVENESV 315
EA K++L N +
Sbjct: 357 EAAKEYLKNNPEI 369
>gi|109453422|gb|ABG34191.1| RecA [Salmonella enterica subsp. arizonae]
gi|109453424|gb|ABG34192.1| RecA [Salmonella enterica subsp. arizonae]
gi|109453426|gb|ABG34193.1| RecA [Salmonella enterica subsp. arizonae]
gi|109453428|gb|ABG34194.1| RecA [Salmonella enterica subsp. arizonae]
gi|109453430|gb|ABG34195.1| RecA [Salmonella enterica subsp. arizonae]
gi|109453432|gb|ABG34196.1| RecA [Salmonella enterica subsp. arizonae]
gi|109453434|gb|ABG34197.1| RecA [Salmonella enterica subsp. arizonae]
gi|109453436|gb|ABG34198.1| RecA [Salmonella enterica subsp. arizonae]
gi|109453438|gb|ABG34199.1| RecA [Salmonella enterica subsp. arizonae]
gi|109453440|gb|ABG34200.1| RecA [Salmonella enterica subsp. arizonae]
Length = 353
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 193/347 (55%), Positives = 246/347 (70%), Gaps = 5/347 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV+VVDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+G+ +GS+
Sbjct: 185 QSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKEGDNVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +K K KAGA ++YN +G
Sbjct: 243 TRVKVVKNKIAAPFKQAEFQILYGEGINFYGELVDLGVKEKLIEKAGAWYSYNGEKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVD-HKEPQTAVTDEDSTEET 347
K +L EN + +E+ K+RE L+ + + P AV D + ET
Sbjct: 303 KANATTWLKENPATAKEIEKKVRELLLSNQNSSPDFAVDDSEGVAET 349
>gi|403675541|ref|ZP_10937703.1| recombinase A [Acinetobacter sp. NCTC 10304]
gi|417545549|ref|ZP_12196635.1| RecA protein [Acinetobacter baumannii OIFC032]
gi|421667199|ref|ZP_16107274.1| RecA protein [Acinetobacter baumannii OIFC087]
gi|421669367|ref|ZP_16109391.1| RecA protein [Acinetobacter baumannii OIFC099]
gi|421808262|ref|ZP_16244113.1| RecA protein [Acinetobacter baumannii OIFC035]
gi|400383437|gb|EJP42115.1| RecA protein [Acinetobacter baumannii OIFC032]
gi|410385545|gb|EKP38036.1| RecA protein [Acinetobacter baumannii OIFC087]
gi|410388759|gb|EKP41187.1| RecA protein [Acinetobacter baumannii OIFC099]
gi|410415842|gb|EKP67623.1| RecA protein [Acinetobacter baumannii OIFC035]
Length = 349
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/341 (53%), Positives = 243/341 (71%), Gaps = 4/341 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K ALQ AL QI FGK ++M LG + T + V VSTGS LDIALG GGLPKGR++E
Sbjct: 4 NKSKALQAALSQIEKQFGKNTVMRLGDN-TVQAVEAVSTGSLTLDIALGIGGLPKGRIIE 62
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTT+ L IA+ Q+ GG C FIDAEHALDP A +GV +NLL++QPD GE
Sbjct: 63 IYGPESSGKTTMTLQAIAQCQKSGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDNGE 122
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L+RSG++D++VVDSVAAL PK E++GEMGD+HM +QARLMSQALRK++ +
Sbjct: 123 QALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAK 182
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+G+E +GS+
Sbjct: 183 RSNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGQVKEGDEIVGSE 240
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK+VKNK+APPFK A F++ +GKG ++ E++DLA++ KAGA ++Y +G
Sbjct: 241 TKVKVVKNKMAPPFKEAIFQILYGKGTNQLGELVDLAVQQDIVQKAGAWYSYQGNKIGQG 300
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDED 342
K ++ EN + EE+ +RE+L+ + DE+
Sbjct: 301 KNNVIRYFEENNQIAEEIERNIREQLLTTGTNGAVQIEDEE 341
>gi|415708667|ref|ZP_11462681.1| recombinase A [Gardnerella vaginalis 6420LIT]
gi|415710249|ref|ZP_11463638.1| recombinase A [Gardnerella vaginalis 6420B]
gi|388054566|gb|EIK77504.1| recombinase A [Gardnerella vaginalis 6420LIT]
gi|388055489|gb|EIK78390.1| recombinase A [Gardnerella vaginalis 6420B]
Length = 379
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 185/342 (54%), Positives = 253/342 (73%), Gaps = 7/342 (2%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
++ AL+ AL + +GKGS M LG + V V+ TGS ALD ALG GG+P+GR+VE
Sbjct: 22 RRQAALETALANVERQYGKGSAMRLGDRPM-QDVEVIPTGSLALDTALGIGGVPRGRIVE 80
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
+YGPE+SGKTTLALH++A AQ+ GG FIDAEHALDP A +GV T+ L+++QPD GE
Sbjct: 81 VYGPESSGKTTLALHIVANAQKNGGVAAFIDAEHALDPVYARKLGVDTDALIVSQPDNGE 140
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D LIRSG++DV+VVDSVAALVPK E+DG+MGD+H+ +QARLMSQALRK++ +LS
Sbjct: 141 QALEIADMLIRSGALDVIVVDSVAALVPKAEIDGDMGDSHVGLQARLMSQALRKMTGALS 200
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ T IFINQ+R K+ F FG P E T GG ALKFYASVR++I+R+ +K+GEE +G++
Sbjct: 201 QAGTTAIFINQLREKIGVF-FGNP-ETTTGGKALKFYASVRMDIRRVSTIKEGEEAVGNR 258
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VKIVKNK+APPFKTA+F++ +G+GIS E +ID+ L+ + K+G+ FTY+ +G
Sbjct: 259 TKVKIVKNKMAPPFKTAEFDVLYGEGISTEGSVIDMGLQAEVIKKSGSWFTYDGEQLGQG 318
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDS 343
+E ++FL +N ++ EE+ K++ L + H E Q A EDS
Sbjct: 319 RENVRKFLKDNPAITEEISEKVKASLGLMHPEDQFA---EDS 357
>gi|350551783|ref|ZP_08920995.1| Protein recA [Thiorhodospira sibirica ATCC 700588]
gi|349796474|gb|EGZ50261.1| Protein recA [Thiorhodospira sibirica ATCC 700588]
Length = 352
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/346 (54%), Positives = 248/346 (71%), Gaps = 8/346 (2%)
Query: 8 LQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPE 67
L AL QI FGKG+++ +G R + +STGS ALDIALG GGLPKGRVVEI+GPE
Sbjct: 9 LSAALTQIERQFGKGAVIRMGGGAAVRDIEAISTGSLALDIALGIGGLPKGRVVEIFGPE 68
Query: 68 ASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSL 127
+SGKTTL L VIA+AQR GG FIDAEHALDP A IGV + LL++QPD GEQAL +
Sbjct: 69 SSGKTTLTLQVIAQAQRAGGTAAFIDAEHALDPGYARRIGVDIDELLVSQPDTGEQALEI 128
Query: 128 VDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTI 187
D L+RSG VD+VV+DSVAAL PK E++GEMGD H+ +QARLMSQALRKL+ ++ S T+
Sbjct: 129 ADMLVRSGGVDIVVIDSVAALTPKAEIEGEMGDTHVGLQARLMSQALRKLTANIQRSNTL 188
Query: 188 LIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVKI 247
+IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +KKG+E IG+ VK+
Sbjct: 189 VIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKKGDEVIGNDTRVKV 246
Query: 248 VKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGKEAFK 306
+KNK+APPFK A FE+ +G+GISR E+ID+ +K K+G+ ++Y +R +GK+ +
Sbjct: 247 IKNKMAPPFKEATFEILYGEGISRLGELIDIGVKDGLIDKSGSWYSYQGERIGQGKDNAR 306
Query: 307 QFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETVSTIS 352
QFL E + +E+ ++R+K PQ+ +T D+ ++S
Sbjct: 307 QFLKEKPELAQEIEQQIRQKYFA----PQS-LTGSDTPRAEFDSVS 347
>gi|417780659|ref|ZP_12428420.1| RecA protein [Leptospira weilii str. 2006001853]
gi|410779368|gb|EKR63985.1| RecA protein [Leptospira weilii str. 2006001853]
Length = 365
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 177/313 (56%), Positives = 241/313 (76%), Gaps = 3/313 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K LA++QA++QI FGKGSIM LG + + V V+ +GS LDIALG GG P GR+VEI
Sbjct: 20 KKLAIEQAMNQIEKQFGKGSIMKLGSDTSKQTVQVIPSGSLDLDIALGIGGYPIGRIVEI 79
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L IAEAQ++GG FIDAEHALDPS A+ +GV + LL++QPD GE+
Sbjct: 80 YGPESSGKTTLTLSAIAEAQKRGGVAAFIDAEHALDPSYAKKLGVNIDELLVSQPDNGEE 139
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + ++L+RS ++D++V+DSVAALVPK E++G+MGD+HM +QARLMSQALRKL+ +++
Sbjct: 140 ALEICESLVRSNAIDLIVIDSVAALVPKAEIEGDMGDSHMGLQARLMSQALRKLTGTIAK 199
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+T++IFINQ+R K+ FG P E T GGNALKFY SVRL+I++I +K+ EE++G+++
Sbjct: 200 SKTVVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYCSVRLDIRKIETIKEKEESVGNRV 257
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK APPFK A+F++ F GISRES ++DL +KH KAGA ++YN +GK
Sbjct: 258 RVKVVKNKCAPPFKQAEFDVIFNAGISRESSLVDLGVKHDIIHKAGAWYSYNTEKIGQGK 317
Query: 303 EAFKQFLVENESV 315
EA K++L N +
Sbjct: 318 EAAKEYLKNNPEI 330
>gi|114775363|ref|ZP_01450931.1| recombinase A [Mariprofundus ferrooxydans PV-1]
gi|114553474|gb|EAU55855.1| recombinase A [Mariprofundus ferrooxydans PV-1]
Length = 336
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 186/329 (56%), Positives = 244/329 (74%), Gaps = 6/329 (1%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLG-RSVTPRHVPVVSTGSFALDIALGTGGLPKGR 59
MS K AL AL QI FGKG++M LG + P V VV +GS ALD ALG GG P+GR
Sbjct: 1 MSDKSKALDTALSQIERQFGKGTVMRLGDHAKVP--VSVVPSGSLALDAALGVGGYPRGR 58
Query: 60 VVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPD 119
V+EIYGPE+SGKTT+ALH IAEAQ+ GG F+DAEHALDPS AE +GV +NLL++QPD
Sbjct: 59 VIEIYGPESSGKTTMALHAIAEAQKLGGQAAFVDAEHALDPSYAERLGVDVDNLLVSQPD 118
Query: 120 CGEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSH 179
GEQAL +VD L RSG VD++VVDSVAAL PK EL+G+MGD+HM +QARLMSQALRKL+
Sbjct: 119 SGEQALEIVDMLTRSGGVDIIVVDSVAALTPKAELEGDMGDSHMGLQARLMSQALRKLTG 178
Query: 180 SLSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETI 239
S++ S TI+IFINQ+R K+ FG P E T GGNALKFYASVRL+++RIG +KKG+E +
Sbjct: 179 SIARSNTIIIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDVRRIGAIKKGDEVM 236
Query: 240 GSQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRN 298
G+ VK+VKNK+APPFK AQF + +G+G+S E++D+ +++ +K+GA + N+R
Sbjct: 237 GNDTRVKVVKNKVAPPFKQAQFSIMYGEGVSHAGEVLDMGVQYGLVNKSGAWYACGNERI 296
Query: 299 FRGKEAFKQFLVENESVREELVIKLREKL 327
+G++ +L E+ + E+ +RE L
Sbjct: 297 GQGRDNAMTYLKEHPEMLAEIETGVREAL 325
>gi|456865671|gb|EMF84005.1| RecA protein [Leptospira weilii serovar Topaz str. LT2116]
Length = 396
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 177/313 (56%), Positives = 241/313 (76%), Gaps = 3/313 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K LA++QA++QI FGKGSIM LG + + V V+ +GS LDIALG GG P GR+VEI
Sbjct: 51 KKLAIEQAMNQIEKQFGKGSIMKLGSDTSKQTVQVIPSGSLDLDIALGIGGYPIGRIVEI 110
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L IAEAQ++GG FIDAEHALDPS A+ +GV + LL++QPD GE+
Sbjct: 111 YGPESSGKTTLTLSAIAEAQKRGGVAAFIDAEHALDPSYAKKLGVNIDELLVSQPDNGEE 170
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + ++L+RS ++D++V+DSVAALVPK E++G+MGD+HM +QARLMSQALRKL+ +++
Sbjct: 171 ALEICESLVRSNAIDLIVIDSVAALVPKAEIEGDMGDSHMGLQARLMSQALRKLTGTIAK 230
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+T++IFINQ+R K+ FG P E T GGNALKFY SVRL+I++I +K+ EE++G+++
Sbjct: 231 SKTVVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYCSVRLDIRKIETIKEKEESVGNRV 288
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK APPFK A+F++ F GISRES ++DL +KH KAGA ++YN +GK
Sbjct: 289 RVKVVKNKCAPPFKQAEFDVIFNAGISRESSLVDLGVKHDIIHKAGAWYSYNTEKIGQGK 348
Query: 303 EAFKQFLVENESV 315
EA K++L N +
Sbjct: 349 EAAKEYLKNNPEI 361
>gi|359407389|ref|ZP_09199866.1| protein RecA [SAR116 cluster alpha proteobacterium HIMB100]
gi|356677428|gb|EHI49772.1| protein RecA [SAR116 cluster alpha proteobacterium HIMB100]
Length = 357
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/345 (52%), Positives = 248/345 (71%), Gaps = 5/345 (1%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVV 61
+ K AL+ A+ QI +FGKGS+M LG+ + + VSTGS LDIALG GG PKGR++
Sbjct: 13 TDKSKALEAAIGQIEKAFGKGSVMKLGQRDSVVDIQAVSTGSLGLDIALGIGGFPKGRII 72
Query: 62 EIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCG 121
EIYGPE+SGKTTLALH +AEAQ GG C F+DAEHALDP+ A +GV ++LL++QPD G
Sbjct: 73 EIYGPESSGKTTLALHAVAEAQAAGGNCAFVDAEHALDPTYARKLGVNLDDLLISQPDAG 132
Query: 122 EQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSL 181
EQAL + DTL+RSG++DV+V+DSVAALVP+ EL+GEMGD H+ + ARLMSQALRKL+ S+
Sbjct: 133 EQALEIADTLVRSGAIDVLVIDSVAALVPRAELEGEMGDTHVGLHARLMSQALRKLTSSI 192
Query: 182 SLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGS 241
+ S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K ++ +G+
Sbjct: 193 ARSNCLVIFINQIRLKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAIKDKDDVVGN 250
Query: 242 QIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-R 300
Q VKIVKNK+A PF+T +F++ +G+GIS+ E++DL + K+GA F+Y + +
Sbjct: 251 QTRVKIVKNKVAAPFRTVEFDIMYGEGISKTGELLDLGVAAGLVEKSGAWFSYGTQRIGQ 310
Query: 301 GKEAFKQFLVENESVREELVIKLREK--LVVDHKEPQTAVTDEDS 343
G+E K F+ EN + EL +R LV + + DE++
Sbjct: 311 GRENAKNFMRENPDISNELETAIRANAGLVQEQMMDASIANDEEA 355
>gi|209884571|ref|YP_002288428.1| recombinase A [Oligotropha carboxidovorans OM5]
gi|337741760|ref|YP_004633488.1| recombinase A [Oligotropha carboxidovorans OM5]
gi|386030776|ref|YP_005951551.1| recombinase A [Oligotropha carboxidovorans OM4]
gi|209872767|gb|ACI92563.1| protein RecA [Oligotropha carboxidovorans OM5]
gi|336095844|gb|AEI03670.1| recombinase A [Oligotropha carboxidovorans OM4]
gi|336099424|gb|AEI07247.1| recombinase A [Oligotropha carboxidovorans OM5]
Length = 360
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/324 (56%), Positives = 243/324 (75%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGS+M LG++ + V+S+GS LDIALG GGLPKGR+VEI
Sbjct: 16 KTKALTAALSQIERQFGKGSVMRLGKNDRSMDIEVISSGSLGLDIALGVGGLPKGRIVEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH +AEAQ++GG C FIDAEHALDP A +GV ++LL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALHAVAEAQKKGGTCAFIDAEHALDPVYARKLGVNVDDLLISQPDHGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV++VDSVAALVP+ EL+GEMGD+ +QARLMSQALRKL+ S++
Sbjct: 136 ALEIADTLVRSGAVDVLIVDSVAALVPRAELEGEMGDSLPGLQARLMSQALRKLTASINK 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ +G P E T GGNALKFYASVRL+I+R G +K+ +E IG+
Sbjct: 196 SNTMVIFINQIRMKIGVM-YGSP-ETTTGGNALKFYASVRLDIRRTGAIKERDEVIGNST 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G+G+S+ EI+DL +K K+GA F+Y+ + +G+
Sbjct: 254 RVKVVKNKLAPPFKQVEFDIMYGEGVSKMGEILDLGVKAGIVEKSGAWFSYDSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E K FL +N + ++ +R+
Sbjct: 314 ENAKSFLRDNPDMVAKIEAAIRQN 337
>gi|229820934|ref|YP_002882460.1| recA protein [Beutenbergia cavernae DSM 12333]
gi|229566847|gb|ACQ80698.1| recA protein [Beutenbergia cavernae DSM 12333]
Length = 350
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 189/338 (55%), Positives = 249/338 (73%), Gaps = 4/338 (1%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
+ K AL+ AL QI FGKGS+M LG P V V+ T S ALD+ALG GGLP+GRV
Sbjct: 5 VGDKSKALEAALGQIDRQFGKGSVMRLGDDTRP-PVEVIPTSSIALDVALGIGGLPRGRV 63
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
VEIYGPE+SGKTT+ALH +A AQR GG FIDAEHALDP A+ +GV T+ LL++QPD
Sbjct: 64 VEIYGPESSGKTTVALHAVANAQRLGGIAGFIDAEHALDPEYAKRLGVDTDALLVSQPDT 123
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + D LIRSG++D+VV+DSVAALVPK E++GEMGD+H+ +QARLMSQALRK++ +
Sbjct: 124 GEQALEIADMLIRSGALDIVVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITGA 183
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
LS S T IFINQ+R K+ F FG P E T GG ALKFYASVRL+++RI +K+G + +G
Sbjct: 184 LSASGTTAIFINQLREKIGVF-FGSP-ETTSGGKALKFYASVRLDVRRIETLKEGTDAVG 241
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNF 299
++ VK+VKNK+APPFK A+F++ +G GISRE +IDL + K+GA +TY D+
Sbjct: 242 NRTRVKVVKNKMAPPFKQAEFDILYGHGISREGGLIDLGVDQGIVRKSGAWYTYEGDQLG 301
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVDHKEPQTA 337
+GKE ++FL +N + +E+ +++EKL + K P A
Sbjct: 302 QGKENARKFLKDNPELADEIETRIKEKLGIGIKVPADA 339
>gi|229061382|ref|ZP_04198728.1| hypothetical protein bcere0026_34690 [Bacillus cereus AH603]
gi|423522390|ref|ZP_17498863.1| protein recA [Bacillus cereus HuA4-10]
gi|228717921|gb|EEL69567.1| hypothetical protein bcere0026_34690 [Bacillus cereus AH603]
gi|401175084|gb|EJQ82287.1| protein recA [Bacillus cereus HuA4-10]
Length = 343
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/348 (52%), Positives = 252/348 (72%), Gaps = 8/348 (2%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
MS + AL AL QI FGKGSIM LG R + +S+GS ALD+ALG GG P+GRV
Sbjct: 1 MSDRQAALDMALKQIEKQFGKGSIMKLGEQ-AERRISTISSGSLALDVALGVGGYPRGRV 59
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+EIYGPE+SGKTT++LH IAE QRQGG FIDAEHA+DP A+ +GV + LLL+QPD
Sbjct: 60 IEIYGPESSGKTTVSLHAIAEVQRQGGQAAFIDAEHAMDPVYAQKLGVNIDELLLSQPDT 119
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQ L + + L+RSG+VD++V+DSVAALVPK E++G+MGD+H+ +QARLMSQALRKLS +
Sbjct: 120 GEQGLEIAEALVRSGAVDIIVIDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKLSGA 179
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
++ S+TI IFINQ+R K+ FG P E T GG ALKFY++VRL ++R +K+G + +G
Sbjct: 180 INKSKTIAIFINQIREKVGVM-FGNP-ETTPGGRALKFYSTVRLEVRRAEQLKQGNDIVG 237
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF- 299
++ +K+VKNK+APPF+ A+ ++ +G+GISRE EI+D+A + K+GA ++YN+
Sbjct: 238 NKTKIKVVKNKVAPPFRVAEVDIMYGEGISREGEILDMASELDIVQKSGAWYSYNEERLG 297
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTD-EDSTEE 346
+G+E KQFL EN +REE+ +RE + + V D EDST +
Sbjct: 298 QGRENSKQFLKENTDLREEIAFFVREHHGIGEN---SGVEDTEDSTRQ 342
>gi|304316844|ref|YP_003851989.1| recA protein [Thermoanaerobacterium thermosaccharolyticum DSM 571]
gi|433654987|ref|YP_007298695.1| protein RecA [Thermoanaerobacterium thermosaccharolyticum M0795]
gi|302778346|gb|ADL68905.1| recA protein [Thermoanaerobacterium thermosaccharolyticum DSM 571]
gi|433293176|gb|AGB18998.1| protein RecA [Thermoanaerobacterium thermosaccharolyticum M0795]
Length = 343
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/349 (52%), Positives = 266/349 (76%), Gaps = 9/349 (2%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
M +K AL A+ QI FGKGSIM LG + + +V V+STGS LDIALG GG+P+GR+
Sbjct: 1 MIEKQKALDMAISQIERQFGKGSIMRLGDN-SKLNVEVISTGSIDLDIALGVGGVPRGRI 59
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+EI+GPE+SGKTT+ALH++AEAQ+ GG FIDAEHALDP+ A+ +GV +NLL++QPD
Sbjct: 60 IEIFGPESSGKTTIALHILAEAQKLGGTGAFIDAEHALDPAYAKNVGVNIDNLLVSQPDT 119
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL +V+ L+RSG++DV+V+DSVAALVPK E+DG+MGDAH+ +QARLMSQALRKLS
Sbjct: 120 GEQALEIVEALVRSGAIDVIVIDSVAALVPKAEIDGDMGDAHVGLQARLMSQALRKLSGI 179
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
+S ++++ +FINQ+R K+ FG P E T GG ALKFY+++RL+++++ +K+G + +G
Sbjct: 180 ISKTKSVAVFINQLREKVGVM-FGNP-ETTPGGRALKFYSTIRLDVRKVDAIKQGNDVVG 237
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYND-RNF 299
++ VK+VKNK+APPFK A+F++ +G+GISRE I+DLA K+GA ++Y D R
Sbjct: 238 NRTRVKVVKNKVAPPFKQAEFDIMYGEGISREGSILDLAASIDIIDKSGAWYSYGDIRLG 297
Query: 300 RGKEAFKQFLVENESVREELVIKLRE--KLVVDHKEPQTAVTDEDSTEE 346
+G+E KQ+L +N+S+ +E+ K+RE L+V K+ +V+D++ +E
Sbjct: 298 QGRENAKQYLKDNKSIADEIENKIRENFNLLVTTKK---SVSDDEIEQE 343
>gi|132219|sp|P16034.1|RECA_MAGMG RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|38868|emb|CAA35243.1| unnamed protein product [Magnetospirillum magnetotacticum]
Length = 344
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 191/339 (56%), Positives = 248/339 (73%), Gaps = 5/339 (1%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL+ A+ QI +FGKGSIM LG VVST LD+ALG GG+P+GR++E+YGP
Sbjct: 6 ALEAAVSQIERAFGKGSIMKLGGKDQVVETEVVSTRILGLDVALGIGGVPRGRIIEVYGP 65
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTTLALH+IAEAQ++GG C F+DAEHALDPS A +G E LL+++PD GEQAL
Sbjct: 66 ESSGKTTLALHIIAEAQKKGGTCAFVDAEHALDPSYARKLGALDE-LLISEPDAGEQALE 124
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ DTL+R G+VDV+VVDSVAALVP+GEL+GEMGD HM + ARLMSQALRKL+ S+S S+T
Sbjct: 125 IADTLVRPGAVDVLVVDSVAALVPRGELEGEMGDNHMGLHARLMSQALRKLTGSVSKSKT 184
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
I+IFINQ+R K+ FG P E T GGNALKFYASVR+ I+R+G +K +E +G+Q VK
Sbjct: 185 IVIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRMEIRRVGAIKDRDEVVGNQTRVK 242
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYND-RNFRGKEAF 305
+VKNKLAPPFK F++ +G+GIS+ E+IDL +K K+GA F+YN R +G+E
Sbjct: 243 VVKNKLAPPFKVVDFDIMYGEGISKMGELIDLGVKANVVKKSGAWFSYNSTRIGQGRENA 302
Query: 306 KQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDST 344
KQFL +N ++ E+ +R+ + E AV D D T
Sbjct: 303 KQFLRDNPAMAAEIEGAIRQNAGL-ISEALAAVPDLDGT 340
>gi|89143137|emb|CAJ41870.1| recombinase A [Pseudochrobactrum asaccharolyticum]
Length = 302
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 180/303 (59%), Positives = 234/303 (77%), Gaps = 3/303 (0%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL AL QI SFGKGSIM LG++ + V TGS +LDIALG GGLPKGR+VEIYGP
Sbjct: 2 ALDAALSQIERSFGKGSIMRLGQNDKVVEIETVPTGSLSLDIALGVGGLPKGRIVEIYGP 61
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTT+ALH IAEAQ++GG C F+DAEHALDP A +GV ENLL++QPD GEQAL
Sbjct: 62 ESSGKTTMALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQALE 121
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ DTL+RSG++DV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S S T
Sbjct: 122 ITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISKSNT 181
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+ +E +G+Q VK
Sbjct: 182 MVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKERDEVVGNQTRVK 239
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGKEAF 305
+VKNKLAPPFK +F++ +G+G+S+ E++DL +K K+G+ F+YN + +G++
Sbjct: 240 VVKNKLAPPFKQVEFDIMYGQGVSKTGELVDLGVKAGIVEKSGSWFSYNSQRLGQGRDNA 299
Query: 306 KQF 308
K F
Sbjct: 300 KNF 302
>gi|269956042|ref|YP_003325831.1| recA protein [Xylanimonas cellulosilytica DSM 15894]
gi|269304723|gb|ACZ30273.1| recA protein [Xylanimonas cellulosilytica DSM 15894]
Length = 376
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/329 (57%), Positives = 249/329 (75%), Gaps = 4/329 (1%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVV 61
+ ++ AL+ AL QI SFGKGS+M LG T V V+ TGS ALD+ALG GGLP+GRV+
Sbjct: 5 ADREKALEAALAQIDRSFGKGSVMRLGEE-TRAPVEVIPTGSIALDVALGIGGLPRGRVI 63
Query: 62 EIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCG 121
EIYGPE+SGKTT+ALH +A AQR GG FIDAEHALDP A+ +GV T+ LL++QPD G
Sbjct: 64 EIYGPESSGKTTVALHAVASAQRAGGIAAFIDAEHALDPEYAKKLGVDTDALLVSQPDTG 123
Query: 122 EQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSL 181
EQAL + D LIRSG++DV+V+DSVAALVPK E++GEMGD+H+ +QARLMSQALRK++ +L
Sbjct: 124 EQALEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITGAL 183
Query: 182 SLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGS 241
+ S T IFINQ+R K+ F FG P E T GG ALKFYASVRL+I+RI +K+G E +G+
Sbjct: 184 NSSGTSAIFINQLREKIGVF-FGSP-ETTTGGKALKFYASVRLDIRRIETLKEGTEPVGN 241
Query: 242 QIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFR 300
+ VK+VKNK+APPFK A+F++ +G GISRE +ID+ ++H K+G+ FTY D+ +
Sbjct: 242 RTRVKVVKNKMAPPFKQAEFDILYGVGISREGGLIDMGVEHGLVRKSGSWFTYEGDQLGQ 301
Query: 301 GKEAFKQFLVENESVREELVIKLREKLVV 329
GKE + FL +N + E+ +++EKL V
Sbjct: 302 GKENARGFLRDNPDLANEIEKRIKEKLGV 330
>gi|113969469|ref|YP_733262.1| recombinase A [Shewanella sp. MR-4]
gi|114046702|ref|YP_737252.1| recombinase A [Shewanella sp. MR-7]
gi|122944845|sp|Q0HXG0.1|RECA_SHESR RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|123130637|sp|Q0HL62.1|RECA_SHESM RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|113884153|gb|ABI38205.1| recA protein [Shewanella sp. MR-4]
gi|113888144|gb|ABI42195.1| recA protein [Shewanella sp. MR-7]
Length = 357
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 185/347 (53%), Positives = 251/347 (72%), Gaps = 4/347 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K+ AL L QI FGKGSIM LG + V +STGS +LD+ALG GGLP GR+VE
Sbjct: 6 NKEKALAAVLSQIEKQFGKGSIMKLGEDRS-MDVETISTGSLSLDVALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A+ +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLEVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV++VDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+R G +K+G+E +G++
Sbjct: 185 QSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRTGAIKEGDEVVGNE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+R E++DL + HK KAGA ++Y D+ +G
Sbjct: 243 TRVKVVKNKVAAPFKQAEFQILYGQGINRTGELVDLGVAHKLIEKAGAWYSYKGDKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETV 348
+ ++L EN ++ E+ LRE L+ + ++ +D++++E V
Sbjct: 303 RANAGKYLTENPAIAAEIDKTLRELLLSNPAALSSSASDDENSEGNV 349
>gi|398332824|ref|ZP_10517529.1| recombinase A [Leptospira alexanderi serovar Manhao 3 str. L 60]
Length = 365
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 177/313 (56%), Positives = 241/313 (76%), Gaps = 3/313 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K LA++QA++QI FGKGSIM LG + + V V+ +GS LDIALG GG P GR+VEI
Sbjct: 20 KKLAIEQAMNQIEKQFGKGSIMKLGSDTSRQTVQVIPSGSLDLDIALGIGGYPIGRIVEI 79
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L IAEAQ++GG FIDAEHALDPS A+ +GV + LL++QPD GE+
Sbjct: 80 YGPESSGKTTLTLSAIAEAQKRGGVAAFIDAEHALDPSYAKKLGVNIDELLVSQPDNGEE 139
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + ++L+RS ++D++V+DSVAALVPK E++G+MGD+HM +QARLMSQALRKL+ +++
Sbjct: 140 ALEICESLVRSNAIDLIVIDSVAALVPKAEIEGDMGDSHMGLQARLMSQALRKLTGTIAK 199
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+T++IFINQ+R K+ FG P E T GGNALKFY SVRL+I++I +K+ EE++G+++
Sbjct: 200 SKTVVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYCSVRLDIRKIETIKEKEESVGNRV 257
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK APPFK A+F++ F GISRES ++DL +KH KAGA ++YN +GK
Sbjct: 258 RVKVVKNKCAPPFKQAEFDIIFNAGISRESSLVDLGVKHDIIHKAGAWYSYNTEKIGQGK 317
Query: 303 EAFKQFLVENESV 315
EA K++L N +
Sbjct: 318 EAAKEYLKNNPEI 330
>gi|316932870|ref|YP_004107852.1| recA protein [Rhodopseudomonas palustris DX-1]
gi|315600584|gb|ADU43119.1| recA protein [Rhodopseudomonas palustris DX-1]
Length = 363
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/324 (55%), Positives = 243/324 (75%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGS+M LG++ + +S+GS LDIALG GGLPKGR+VEI
Sbjct: 17 KSKALSAALSQIERQFGKGSVMKLGKNDRAMEIETISSGSLGLDIALGVGGLPKGRIVEI 76
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH +AEAQ++GG C FIDAEHALDP A +GV ++LL++QPD GEQ
Sbjct: 77 YGPESSGKTTLALHCVAEAQKKGGICAFIDAEHALDPVYARKLGVNVDDLLISQPDHGEQ 136
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV++VDSVAALVP+ EL+GEMGDA +QARLMSQALRKL+ S++
Sbjct: 137 ALEIADTLVRSGAIDVLIVDSVAALVPRAELEGEMGDALPGLQARLMSQALRKLTASINK 196
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ +G P E T GGNALKFYASVRL+I+RIG +K+ +E +G+Q
Sbjct: 197 SNTMVIFINQIRMKIGVM-YGSP-ETTTGGNALKFYASVRLDIRRIGAIKERDEVVGNQT 254
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G+G+S+ EI+DL +K K+GA F+++ + +G+
Sbjct: 255 RVKVVKNKLAPPFKQVEFDIMYGEGVSKMGEILDLGVKAGIVEKSGAWFSHDSQRLGQGR 314
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E K FL N + ++ +R+
Sbjct: 315 ENAKAFLRANPDMTAKIEAAIRQN 338
>gi|238756255|ref|ZP_04617571.1| hypothetical protein yruck0001_32420 [Yersinia ruckeri ATCC 29473]
gi|238705510|gb|EEP97911.1| hypothetical protein yruck0001_32420 [Yersinia ruckeri ATCC 29473]
Length = 356
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 191/338 (56%), Positives = 246/338 (72%), Gaps = 5/338 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKG+IM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGAIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A+ +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIASAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV++VDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+G+ +GS+
Sbjct: 185 NANTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKEGDVVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +KHK KAGA ++YN D+ +G
Sbjct: 243 TRVKVVKNKIAAPFKQAEFQILYGEGININGELVDLGVKHKLIEKAGAWYSYNGDKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVT 339
K +L EN ++ ++ KLRE L+ E Q AVT
Sbjct: 303 KANASNYLKENPAIAADIDKKLREMLLSGTGE-QGAVT 339
>gi|365848106|ref|ZP_09388586.1| RecA protein [Yokenella regensburgei ATCC 43003]
gi|364571500|gb|EHM49087.1| RecA protein [Yokenella regensburgei ATCC 43003]
Length = 357
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 193/346 (55%), Positives = 245/346 (70%), Gaps = 4/346 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 11 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 69
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A +GV +NLL +QPD GE
Sbjct: 70 IYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGE 129
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV+VVDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 130 QALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 189
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+G+ +GS+
Sbjct: 190 QSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKEGDNVVGSE 247
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +K K KAGA ++YN D+ +G
Sbjct: 248 TRVKVVKNKIAAPFKQAEFQILYGEGINFFGELVDLGVKEKLIEKAGAWYSYNGDKIGQG 307
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEET 347
K +L EN + +E+ K+RE L+ + V D EET
Sbjct: 308 KANAINWLKENPAAAKEIEKKVRELLLSNQNSTPDFVVDSADVEET 353
>gi|423205107|ref|ZP_17191663.1| protein recA [Aeromonas veronii AMC34]
gi|404624928|gb|EKB21746.1| protein recA [Aeromonas veronii AMC34]
Length = 354
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/326 (56%), Positives = 242/326 (74%), Gaps = 4/326 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGSIM LG S T + +STGS +LD+ALG GGLP GR+VEI
Sbjct: 5 KQKALAAALGQIEKQFGKGSIMRLGDSKT-MDIEAISTGSLSLDVALGIGGLPCGRIVEI 63
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIAEAQ++G C F+DAEHALDP A +GV ++LL++QPD GEQ
Sbjct: 64 YGPESSGKTTLTLQVIAEAQKKGKTCAFVDAEHALDPIYAAKLGVNVDDLLISQPDTGEQ 123
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RS +VDV++VDSVAAL PK E++GEMGD+H+ +QARLMSQALRKL+ ++
Sbjct: 124 ALEICDMLVRSNAVDVIIVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKN 183
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
+ + IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+G+E +G++
Sbjct: 184 ANCLCIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAIKEGDEVVGNET 241
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK A+F++ +G GIS+E E++DL +KHK KAGA ++YN +GK
Sbjct: 242 RVKVVKNKVAPPFKQAEFQIFYGAGISKEGELVDLGVKHKLIDKAGAWYSYNGEKIGQGK 301
Query: 303 EAFKQFLVENESVREELVIKLREKLV 328
+ EN+ + E+ +LRE L+
Sbjct: 302 ANVMKLFAENKVMAGEVEARLRELLL 327
>gi|134122758|dbj|BAF49677.1| RecA [Physcomitrella patens]
Length = 435
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 191/330 (57%), Positives = 257/330 (77%), Gaps = 5/330 (1%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVV 61
SK+ L +Q A+DQI GK ++MWLGR + + VV TGS LDIALG GGLPKGRVV
Sbjct: 76 SKQSL-IQAAIDQIAKKHGKETVMWLGRE-SRDFIDVVPTGSLNLDIALGVGGLPKGRVV 133
Query: 62 EIYGPEASGKTTLALHVIAEAQRQG-GYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
EI+G EASGKTT+ALHVIA+AQ+ G G+C+F+DAEHALD AE IGV T++LL QPD
Sbjct: 134 EIFGQEASGKTTIALHVIAQAQKMGKGHCLFVDAEHALDMQFAEGIGVNTKDLLFVQPDY 193
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
EQAL VD +RS VDV+VVDSVAALVPK EL+G+MGD+ MA+QARLMS+ALR+L+HS
Sbjct: 194 AEQALDTVDHFVRSTGVDVIVVDSVAALVPKAELEGDMGDSQMALQARLMSKALRRLTHS 253
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPT-EVTCGGNALKFYASVRLNIKRIGLVKKGEETI 239
L+ S +LIFINQ RAKL+T+G GGPT EVT GGNALKFYASVRL +++ +++G+
Sbjct: 254 LNSSNCLLIFINQTRAKLNTYGGGGPTAEVTAGGNALKFYASVRLQVRKKEQLRRGDVPF 313
Query: 240 GSQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF 299
GS + VK+VKNK++PPF+TA+F++E+GKGISR+ E++DL +KH ++G+ ++Y +NF
Sbjct: 314 GSSVIVKVVKNKVSPPFRTAEFDIEYGKGISRDGEVLDLGVKHGLLGQSGSWYSYEGKNF 373
Query: 300 -RGKEAFKQFLVENESVREELVIKLREKLV 328
G+E K++L E+ + + LV+ ++EK++
Sbjct: 374 ANGREGAKKYLQEHTDLTDALVVAIKEKIL 403
>gi|423141319|ref|ZP_17128957.1| protein RecA [Salmonella enterica subsp. houtenae str. ATCC
BAA-1581]
gi|109453464|gb|ABG34212.1| RecA [Salmonella enterica subsp. houtenae]
gi|109453466|gb|ABG34213.1| RecA [Salmonella enterica subsp. houtenae]
gi|109453468|gb|ABG34214.1| RecA [Salmonella enterica subsp. houtenae]
gi|109453470|gb|ABG34215.1| RecA [Salmonella enterica subsp. houtenae]
gi|109453476|gb|ABG34218.1| RecA [Salmonella enterica subsp. houtenae]
gi|109453478|gb|ABG34219.1| RecA [Salmonella enterica subsp. houtenae]
gi|109453480|gb|ABG34220.1| RecA [Salmonella enterica subsp. houtenae]
gi|109453482|gb|ABG34221.1| RecA [Salmonella enterica subsp. houtenae]
gi|109453484|gb|ABG34222.1| RecA [Salmonella enterica subsp. houtenae]
gi|109453486|gb|ABG34223.1| RecA [Salmonella enterica subsp. houtenae]
gi|379050491|gb|EHY68383.1| protein RecA [Salmonella enterica subsp. houtenae str. ATCC
BAA-1581]
Length = 353
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 193/347 (55%), Positives = 245/347 (70%), Gaps = 5/347 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV+VVDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+G+ +GS+
Sbjct: 185 QSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKEGDNVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +K K KAGA ++YN +G
Sbjct: 243 TRVKVVKNKIAAPFKQAEFQILYGEGINFYGELVDLGVKEKLIEKAGAWYSYNGEKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHK-EPQTAVTDEDSTEET 347
K +L EN + +E+ K+RE L+ + P AV D + ET
Sbjct: 303 KANATTWLKENPATAKEIEKKVRELLLSNQNATPDFAVDDSEGVAET 349
>gi|386867274|ref|YP_006280268.1| recombinase A [Bifidobacterium animalis subsp. animalis ATCC 25527]
gi|385701357|gb|AFI63305.1| recombinase A [Bifidobacterium animalis subsp. animalis ATCC 25527]
Length = 382
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/365 (51%), Positives = 263/365 (72%), Gaps = 6/365 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K++ AL AL Q+ FGKGS M LG + + V+ TGS ALD ALG GGLP+GR+VE
Sbjct: 23 KREDALNSALAQVEKQFGKGSAMRLGDR-PEQDIEVIPTGSLALDTALGIGGLPRGRIVE 81
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTLALHV+A AQ+ GG FIDAEHALDP A +GV T++L+++QPD GE
Sbjct: 82 IYGPESSGKTTLALHVVANAQKNGGVAAFIDAEHALDPVYARHLGVDTDSLIVSQPDNGE 141
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D LIRSG++DV+V+DSVAALVPK E++G+MGD+H+ +QARLMSQALRK++ +L+
Sbjct: 142 QALEIADMLIRSGALDVIVIDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKMTGALA 201
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ T IFINQ+R K+ F FG P E T GG ALKFYASVR++I+RI +K +E IG++
Sbjct: 202 QANTTAIFINQLREKIGVF-FGSP-ETTTGGKALKFYASVRMDIRRIQTLKDKDEPIGNR 259
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK+VKNK+APPFKTA+F++ +G+GIS+E I+D+AL+ K+G+ FTYN +G
Sbjct: 260 TRVKVVKNKMAPPFKTAEFDMLYGQGISQEGSILDMALETDVVRKSGSWFTYNGEQLGQG 319
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETVSTISPDSTDEEAA 361
+E ++FL++N + EE+ +++ K + + Q + + + EE +I+ ++ EA
Sbjct: 320 RENVRKFLIDNPKLAEEISTQVKVKTGLISTDDQFGI--DGTEEEDGESITTSESNAEAQ 377
Query: 362 AVVEA 366
EA
Sbjct: 378 TGAEA 382
>gi|121602844|ref|YP_989026.1| recombinase A [Bartonella bacilliformis KC583]
gi|421760829|ref|ZP_16197643.1| recombinase A [Bartonella bacilliformis INS]
gi|166199600|sp|A1USS3.1|RECA_BARBK RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|120615021|gb|ABM45622.1| protein RecA [Bartonella bacilliformis KC583]
gi|411174597|gb|EKS44629.1| recombinase A [Bartonella bacilliformis INS]
Length = 347
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 189/327 (57%), Positives = 240/327 (73%), Gaps = 4/327 (1%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
M KK AL AL QI SFGKGSIM LG+ + +STGS +LDIALG GGLPKGR+
Sbjct: 1 MDKKK-ALDAALSQIERSFGKGSIMRLGQKEGVVEIETISTGSLSLDIALGVGGLPKGRI 59
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+EIYGPE+SGKTTLALH IAEAQ+ GG C F+DAEHALDP A +GV ENL ++QPD
Sbjct: 60 IEIYGPESSGKTTLALHAIAEAQKNGGVCAFVDAEHALDPIYARKLGVDLENLFVSQPDT 119
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + +TL+RSG+VDV+VVDSVAAL P+ E+DGEM D+ +QARLMS+ALRKL+ S
Sbjct: 120 GEQALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMSDSLPGLQARLMSKALRKLTAS 179
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
+ S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K E +G
Sbjct: 180 IFRSNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKDKELVVG 237
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF- 299
+Q VK+VKNKLAPPFK +F++ +G+GIS+ E+IDL +K K+GA F+YN +
Sbjct: 238 NQTRVKVVKNKLAPPFKQVEFDIIYGEGISKLGELIDLGVKVGIVEKSGAWFSYNSQRLG 297
Query: 300 RGKEAFKQFLVENESVREELVIKLREK 326
+G+E KQFL E+ + E+ LR+
Sbjct: 298 QGRENAKQFLREHAEIAAEIETALRQN 324
>gi|161502126|ref|YP_001569238.1| recombinase A [Salmonella enterica subsp. arizonae serovar
62:z4,z23:- str. RSK2980]
gi|160863473|gb|ABX20096.1| hypothetical protein SARI_00143 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
Length = 358
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 193/347 (55%), Positives = 246/347 (70%), Gaps = 5/347 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 11 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 69
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A +GV +NLL +QPD GE
Sbjct: 70 IYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGE 129
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV+VVDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 130 QALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 189
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+G+ +GS+
Sbjct: 190 QSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKEGDNVVGSE 247
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +K K KAGA ++YN +G
Sbjct: 248 TRVKVVKNKIAAPFKQAEFQILYGEGINFYGELVDLGVKEKLIEKAGAWYSYNGEKIGQG 307
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVD-HKEPQTAVTDEDSTEET 347
K +L EN + +E+ K+RE L+ + + P AV D + ET
Sbjct: 308 KANATTWLKENPATAKEIEKKVRELLLSNQNSSPDFAVDDSEGVAET 354
>gi|336324365|ref|YP_004604332.1| protein recA [Flexistipes sinusarabici DSM 4947]
gi|336107946|gb|AEI15764.1| Protein recA [Flexistipes sinusarabici DSM 4947]
Length = 348
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/334 (54%), Positives = 250/334 (74%), Gaps = 8/334 (2%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K A+ AL +I FGKG++M LG + +PV+ TGS +LDIALG GG+P+GR+VEI
Sbjct: 5 KQKAIDLALGKIERDFGKGAVMRLGDKAAEK-LPVIPTGSLSLDIALGVGGVPRGRIVEI 63
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YG E+SGKTT+ALHVIAEAQ++GG F+DAEHA+DP A+ IGV T+NLL++QPD GE
Sbjct: 64 YGAESSGKTTVALHVIAEAQKKGGVAAFVDAEHAMDPVYADAIGVDTDNLLVSQPDSGEA 123
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + +TL+RSG+VDVVV+DSVAAL P+ E++GEMGDAHM +QARLMSQALRKL+ ++
Sbjct: 124 ALEIAETLVRSGAVDVVVIDSVAALTPRAEIEGEMGDAHMGLQARLMSQALRKLTSIVNK 183
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+T LIFINQ R K+ FG P E T GGNALKFY++VR+ +KR +K+ +ET+G+ +
Sbjct: 184 SRTTLIFINQTRQKIGVM-FGNP-ETTTGGNALKFYSTVRVEVKRTASLKEKDETVGNHV 241
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRGK 302
K+VKNK+APPF+ A+F++ FGKGISRE +ID+ +K SKAGA F+Y N R +GK
Sbjct: 242 LAKVVKNKVAPPFRQAEFDIMFGKGISREGILIDMGVKENIISKAGAWFSYGNTRLGQGK 301
Query: 303 EAFKQFLVENESVREELVIKLREKLVVDHKEPQT 336
E + +L+EN + +E+ ++++ +H P T
Sbjct: 302 ENTRAYLMENSEIADEIENQIKK----NHNIPVT 331
>gi|427390254|ref|ZP_18884660.1| protein recA [Actinobaculum massiliae ACS-171-V-Col2]
gi|425733269|gb|EKU96075.1| protein recA [Actinobaculum massiliae ACS-171-V-Col2]
Length = 382
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 186/335 (55%), Positives = 250/335 (74%), Gaps = 5/335 (1%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVV 61
S ++ A++ AL+QI FGKGS+M LG R V V+ TGS ALDIALG GGLP+GRVV
Sbjct: 11 SNREKAIESALEQIDKQFGKGSVMRLGDQ-PARRVEVIPTGSVALDIALGIGGLPRGRVV 69
Query: 62 EIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCG 121
E+YGPE+SGKTT+ALH +A AQR GG FIDAEHALDP A +GV T+ L+++QPD G
Sbjct: 70 EVYGPESSGKTTVALHAVASAQRNGGIAAFIDAEHALDPEYARNLGVNTDELIVSQPDTG 129
Query: 122 EQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSL 181
EQAL ++D LIRSG++D+VV+DSVAALVPK E++G+MGD+H+ +QARLMSQALRK++ +L
Sbjct: 130 EQALEIMDMLIRSGALDIVVIDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKITGAL 189
Query: 182 SLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGS 241
S S T IFINQ+R K+ F FG P E T GG ALKFY+SVRL+++RI +K G +G+
Sbjct: 190 SASGTTAIFINQLREKIGVF-FGNP-ETTTGGKALKFYSSVRLDVRRIETLKDGGTPVGN 247
Query: 242 QIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFR 300
+ VK+VKNK+APPFK A+F++ +G+GISRE I+D+ + K+GA FTY D+ +
Sbjct: 248 RTRVKVVKNKMAPPFKQAEFDIIYGEGISREGGILDMGVDEGIVRKSGAWFTYEGDQLGQ 307
Query: 301 GKEAFKQFLVENESVREELVIKLREKLVVDHKEPQ 335
GKE +QFL +N + EE+ K+ K+ + K+P+
Sbjct: 308 GKEKARQFLKDNPDLCEEIEDKILRKVGI-RKDPE 341
>gi|16800503|ref|NP_470771.1| recombinase A [Listeria innocua Clip11262]
gi|422415897|ref|ZP_16492854.1| protein RecA [Listeria innocua FSL J1-023]
gi|423100478|ref|ZP_17088185.1| RecA protein [Listeria innocua ATCC 33091]
gi|20139535|sp|Q92BV7.1|RECA_LISIN RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|16413908|emb|CAC96666.1| Recombination protein recA [Listeria innocua Clip11262]
gi|30265997|gb|AAN15814.1| RecA [Listeria innocua]
gi|30265999|gb|AAN15815.1| RecA [Listeria innocua]
gi|313623831|gb|EFR93956.1| protein RecA [Listeria innocua FSL J1-023]
gi|370793479|gb|EHN61317.1| RecA protein [Listeria innocua ATCC 33091]
Length = 348
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/354 (51%), Positives = 262/354 (74%), Gaps = 12/354 (3%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
M+ + AL QAL QI FGKGSIM LG + +++ +S+GS ALDIALG GG P+GR+
Sbjct: 1 MNDRQAALDQALKQIEKQFGKGSIMKLGEH-SDQNISTISSGSLALDIALGVGGYPRGRI 59
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+E+YGPE+SGKTT+ALH IAE Q QGG FIDAEHALDP+ A+ +GV + LLL+QPD
Sbjct: 60 IEVYGPESSGKTTVALHAIAEVQAQGGTAAFIDAEHALDPAYAKNLGVNIDELLLSQPDT 119
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + + L+RSG+VD++V+DSVAALVP+ E++GEMGDAH+ +QARLMSQALRKLS
Sbjct: 120 GEQALEIAEALVRSGAVDMLVIDSVAALVPRAEIEGEMGDAHVGLQARLMSQALRKLSGV 179
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
++ S+TI IFINQ+R K+ FG P E+T GG ALKFY++VRL ++R +K+G + +G
Sbjct: 180 INKSKTIAIFINQIREKVGVM-FGNP-EITPGGRALKFYSTVRLEVRRAEQLKQGTDVMG 237
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF- 299
++ +K+VKNK+APPF+ A+ ++ +G+GISRE E++D+A + +K+G+ ++Y +
Sbjct: 238 NKTKIKVVKNKVAPPFRIAEVDIMYGEGISREGELVDMAAEVDVINKSGSWYSYKEERIG 297
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVD--HKEPQTAVTDEDSTEETVSTI 351
+G+E KQ+L E+ +R+E+ ++RE+ +D +KEP D EET+S +
Sbjct: 298 QGRENAKQYLKEHTDIRDEISKRVREEYEIDGTNKEPL------DENEETLSLL 345
>gi|395784151|ref|ZP_10463990.1| protein recA [Bartonella melophagi K-2C]
gi|395423906|gb|EJF90094.1| protein recA [Bartonella melophagi K-2C]
Length = 347
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 185/324 (57%), Positives = 239/324 (73%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI SFGKGSIM LG+ + + TGS +LDIALG GGLPKGR++EI
Sbjct: 3 KTKALDSALSQIERSFGKGSIMRLGQKEQVVEIETIPTGSLSLDIALGVGGLPKGRIIEI 62
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH IAEAQ+ GG C F+DAEHALDP A +GVK E+LL++QPD GEQ
Sbjct: 63 YGPESSGKTTLALHAIAEAQKNGGVCAFVDAEHALDPIYARKLGVKLEDLLISQPDTGEQ 122
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + +TL+RSG++DV+VVDSVAAL P+ E+DGEM D+ +QARLMS+ALRKL+ S+
Sbjct: 123 ALEIAETLVRSGAIDVLVVDSVAALTPRAEIDGEMNDSVPGLQARLMSKALRKLTASIFR 182
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+R+G +K + IG+Q
Sbjct: 183 SNCMVIFINQIRIKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRVGAIKDRDMVIGNQT 240
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G+GIS+ E+IDL +K K+G+ F+YN + +G+
Sbjct: 241 RVKVVKNKLAPPFKQVEFDIIYGEGISKVGELIDLGVKAGIVEKSGSWFSYNSQRLGQGR 300
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E KQFL EN + E+ LR+
Sbjct: 301 ENAKQFLHENAEIATEIESTLRQN 324
>gi|109453490|gb|ABG34225.1| RecA [Salmonella enterica subsp. indica]
gi|109453492|gb|ABG34226.1| RecA [Salmonella enterica subsp. indica]
gi|109453494|gb|ABG34227.1| RecA [Salmonella enterica subsp. indica]
gi|109453496|gb|ABG34228.1| RecA [Salmonella enterica subsp. indica]
gi|109453498|gb|ABG34229.1| RecA [Salmonella enterica subsp. indica]
gi|109453500|gb|ABG34230.1| RecA [Salmonella enterica subsp. indica]
Length = 353
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 193/347 (55%), Positives = 245/347 (70%), Gaps = 5/347 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV+VVDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+G+ +GS+
Sbjct: 185 QSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKEGDNVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +K K KAGA ++YN +G
Sbjct: 243 TRVKVVKNKIAAPFKQAEFQILYGEGINFYGELVDLGVKEKLIEKAGAWYSYNGEKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHK-EPQTAVTDEDSTEET 347
K +L EN + +E+ K+RE L+ + P AV D + ET
Sbjct: 303 KANATTWLKENPTTAKEIEKKVRELLLSNQNATPDFAVDDSEDVAET 349
>gi|49474376|ref|YP_032418.1| recombinase A [Bartonella quintana str. Toulouse]
gi|59798256|sp|Q6FZF0.1|RECA_BARQU RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|49239880|emb|CAF26278.1| recA protein [Bartonella quintana str. Toulouse]
Length = 347
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 187/324 (57%), Positives = 238/324 (73%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI SFGKGSIM LG+ + + TGS +LDIALG GGLPKGR+VEI
Sbjct: 3 KTKALDAALSQIERSFGKGSIMRLGQKEQVVEIETIPTGSLSLDIALGVGGLPKGRIVEI 62
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH IAEAQ+ GG C FIDAEHALDP A +GV ENL ++QPD GEQ
Sbjct: 63 YGPESSGKTTLALHAIAEAQKNGGVCAFIDAEHALDPIYARKLGVDLENLFISQPDTGEQ 122
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + +TL+RSG+VDV+VVDSVAAL P+ E+DGEMGDA +QARLMS+ALRKL+ S+
Sbjct: 123 ALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDALPGLQARLMSKALRKLTASIFR 182
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+R+G +K + +G+Q
Sbjct: 183 SNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRVGSIKDRDMIVGNQT 240
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G+GIS+ E+IDL +K K+G+ F+YN + +G+
Sbjct: 241 RVKVVKNKLAPPFKQVEFDIIYGEGISKLGELIDLGVKVGIVEKSGSWFSYNSQRLGQGR 300
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E KQFL E+ + E+ LR+
Sbjct: 301 ENAKQFLREHAEIATEIETALRQN 324
>gi|380301953|ref|ZP_09851646.1| recombination protein RecA [Brachybacterium squillarum M-6-3]
Length = 365
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 190/336 (56%), Positives = 246/336 (73%), Gaps = 5/336 (1%)
Query: 8 LQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPE 67
L AL QI FGKGS+M LG P V V+ TGS ALD ALG GGLP+GR+VE+YGPE
Sbjct: 15 LDAALAQIDRQFGKGSVMRLGEDTRP-PVEVIPTGSVALDAALGIGGLPRGRIVEVYGPE 73
Query: 68 ASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSL 127
+SGKTT+ALH +A AQR GG FIDAEHALDP A+ +GV T+ LL++QPD GEQAL +
Sbjct: 74 SSGKTTVALHAVASAQRNGGIAAFIDAEHALDPEYAKKLGVDTDALLVSQPDTGEQALEI 133
Query: 128 VDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTI 187
D L+RSG++DV+V+DSVAALVPK E++GEMGD+H+ +QARLMSQALRKL+ +LS S T
Sbjct: 134 ADMLVRSGALDVIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTGALSASGTT 193
Query: 188 LIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVKI 247
IFINQ+R K+ F FG P E T GG ALKFYASVR++I+RI +K G++++G++ VK+
Sbjct: 194 AIFINQLREKIGVF-FGSP-ETTTGGKALKFYASVRMDIRRIETLKSGQDSVGNRTRVKV 251
Query: 248 VKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRGKEAFK 306
VKNK+APPFK A+F++ +G+GISRE +IDL ++H K+GA FTY D+ +GKE +
Sbjct: 252 VKNKMAPPFKQAEFDILYGEGISREGGLIDLGVEHGVVRKSGAWFTYEGDQLGQGKENAR 311
Query: 307 QFLVENESVREELVIK-LREKLVVDHKEPQTAVTDE 341
QFL +N + E+ K LR V + Q DE
Sbjct: 312 QFLKDNTDLAAEIEEKILRTLGVGKYAAEQAGAADE 347
>gi|414174616|ref|ZP_11429020.1| protein recA [Afipia broomeae ATCC 49717]
gi|410888445|gb|EKS36248.1| protein recA [Afipia broomeae ATCC 49717]
Length = 362
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/323 (56%), Positives = 241/323 (74%), Gaps = 3/323 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGS+M LG++ + V+ +GS LDIALG GGLPKGRVVEI
Sbjct: 16 KTKALSAALSQIERQFGKGSVMKLGKNDRSMDIEVIPSGSLGLDIALGVGGLPKGRVVEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH +AEAQ++GG C FIDAEHALDP A +GV + LL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGVNVDELLISQPDHGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV++VDSVAALVP+ EL+GEMGDA +QARLMSQALRKL+ S++
Sbjct: 136 ALEIADTLVRSGAVDVLIVDSVAALVPRAELEGEMGDALPGLQARLMSQALRKLTASINK 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ +G P E T GGNALKFYASVRL+I+RIG +K+ +E +G+
Sbjct: 196 SHTMVIFINQIRMKIGVM-YGSP-ETTTGGNALKFYASVRLDIRRIGQIKERDEVVGNST 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G+G+S+ EI+DL +K K+GA F+Y+ + +G+
Sbjct: 254 RVKVVKNKLAPPFKQVEFDIMYGEGVSKMGEILDLGVKAGIVEKSGAWFSYDSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLRE 325
E K FL N + ++ +R+
Sbjct: 314 ENSKAFLKANPEITAKIEASIRQ 336
>gi|146424893|emb|CAM12555.1| recombinase A [Ochrobactrum anthropi]
gi|146424973|emb|CAM12595.1| recombinase A [Ochrobactrum anthropi]
gi|148887245|emb|CAM12789.1| recombinase A [Ochrobactrum intermedium]
gi|148897667|emb|CAM18487.1| recombinase A [Ochrobactrum intermedium]
gi|148897669|emb|CAM18488.1| recombinase A [Ochrobactrum intermedium]
gi|148897671|emb|CAM18489.1| recombinase A [Ochrobactrum intermedium]
gi|148897673|emb|CAM18490.1| recombinase A [Ochrobactrum intermedium]
gi|148897675|emb|CAM18491.1| recombinase A [Ochrobactrum intermedium]
gi|148897677|emb|CAM18492.1| recombinase A [Ochrobactrum intermedium]
gi|148897681|emb|CAM18494.1| recombinase A [Ochrobactrum intermedium]
gi|148897683|emb|CAM18495.1| recombinase A [Ochrobactrum intermedium]
gi|148897685|emb|CAM18496.1| recombinase A [Ochrobactrum intermedium]
gi|148897687|emb|CAM18497.1| recombinase A [Ochrobactrum intermedium]
gi|148897689|emb|CAM18498.1| recombinase A [Ochrobactrum intermedium]
gi|148897691|emb|CAM18499.1| recombinase A [Ochrobactrum intermedium]
gi|148897693|emb|CAM18500.1| recombinase A [Ochrobactrum intermedium]
Length = 299
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 180/299 (60%), Positives = 232/299 (77%), Gaps = 3/299 (1%)
Query: 11 ALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASG 70
AL QI +FGKGSIM LG++ + VSTGS +LDIALG GGLPKGR+VEIYGPE+SG
Sbjct: 3 ALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIVEIYGPESSG 62
Query: 71 KTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSLVDT 130
KTTLALH IAEAQ++GG C F+DAEHALDP A +GV ENLL++QPD GEQAL + DT
Sbjct: 63 KTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQALEITDT 122
Query: 131 LIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIF 190
L+RSG++DV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S S ++IF
Sbjct: 123 LVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISRSNCMVIF 182
Query: 191 INQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVKIVKN 250
INQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+ +E +G+Q VK+VKN
Sbjct: 183 INQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKERDEVVGNQTRVKVVKN 240
Query: 251 KLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGKEAFKQF 308
KLAPPFK +F++ +G G+S+ E++DL +K K+GA F+YN + +G+E KQ+
Sbjct: 241 KLAPPFKQVEFDIMYGAGVSKTGELVDLGVKAGVVEKSGAWFSYNSQRLGQGRENAKQY 299
>gi|260907234|ref|ZP_05915556.1| recA protein [Brevibacterium linens BL2]
Length = 370
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 187/357 (52%), Positives = 261/357 (73%), Gaps = 8/357 (2%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI ++GKG+IM LG V + + TGS ALDIALG GGLP+GRVVEI
Sbjct: 16 KSKALDAALGQIDRNYGKGAIMRLGEGVR-EPIACIPTGSIALDIALGIGGLPRGRVVEI 74
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ALH +A AQ+ GG FIDAEHALDP A+ +GV T+ LL++QPD GEQ
Sbjct: 75 YGPESSGKTTVALHAVANAQKTGGIAAFIDAEHALDPEYAKKLGVDTDQLLVSQPDTGEQ 134
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D LIRSG++DV+V+DSVAALVPK E++GEMGD+H+ +QARLMSQALRK++ +LS
Sbjct: 135 ALEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKIAGALSQ 194
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+T IFINQ+R K+ F FG P E T GG ALKFYASVR++++RI +K+G++ +G++
Sbjct: 195 SKTTAIFINQLREKVGVF-FGSP-ETTSGGKALKFYASVRIDVRRIETLKEGQDAVGNRT 252
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGK 302
KIVKNK+APPFK A+F++ +G+GISRE +ID+ + + K+G+ FTY+ D+ +GK
Sbjct: 253 RAKIVKNKIAPPFKQAEFDIIYGQGISREGSLIDMGVDNGIIRKSGSWFTYDGDQLGQGK 312
Query: 303 EAFKQFLVENESVREELVIKLREKL-VVDHKEPQTAVTDEDSTEETVSTISPDSTDE 358
E + FL +N + EE+ +K++ K+ ++ EP+ D D+ + ++ +D+
Sbjct: 313 ENVRNFLRDNPGLAEEIELKIKHKMGLIKVDEPE---ADADANQADGASAESSKSDD 366
>gi|383819253|ref|ZP_09974529.1| RecA protein [Mycobacterium phlei RIVM601174]
gi|383337224|gb|EID15605.1| RecA protein [Mycobacterium phlei RIVM601174]
Length = 346
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/340 (54%), Positives = 252/340 (74%), Gaps = 9/340 (2%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
++ AL+ AL QI +FGKGS+M LG V + + V+ TGS ALD+ALG GGLP+GR++EI
Sbjct: 7 REKALELALAQIDKNFGKGSVMRLGEEVR-QPISVIPTGSIALDVALGIGGLPRGRIIEI 65
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ALH +A AQ GG FIDAEHALDP A+ +GV T+ LL++QPD GEQ
Sbjct: 66 YGPESSGKTTVALHAVANAQASGGIAAFIDAEHALDPEYAKKLGVDTDALLVSQPDTGEQ 125
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RSG++D++V+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ +L+
Sbjct: 126 ALEIADMLVRSGAIDIIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTGALNN 185
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T IFINQ+R K+ FG P E T GG ALKFYASVR++++RI +K G E +G++
Sbjct: 186 SGTTAIFINQLREKIGVM-FGSP-ETTTGGKALKFYASVRMDVRRIETLKDGTEAVGNRT 243
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VKIVKNK++PPFK A+F++ +G+GISRE +ID+ ++ F K+G+ FTY +GK
Sbjct: 244 RVKIVKNKVSPPFKQAEFDILYGRGISREGSLIDMGVEQGFIRKSGSWFTYEGEQLGQGK 303
Query: 303 EAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDED 342
E + FL+EN V E+ K++EKL + + VTDED
Sbjct: 304 ENARNFLLENPDVANEIEKKIKEKLGIGAQ-----VTDED 338
>gi|358458882|ref|ZP_09169087.1| Protein recA [Frankia sp. CN3]
gi|357077844|gb|EHI87298.1| Protein recA [Frankia sp. CN3]
Length = 345
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/325 (55%), Positives = 245/325 (75%), Gaps = 4/325 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
+D AL AL QI FGKGS+M LG T + V+ TGS ALD+ALG GGLP+GR++EI
Sbjct: 6 RDKALDNALAQIDKQFGKGSVMRLGDE-TRMPIQVIPTGSIALDVALGIGGLPRGRIIEI 64
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ALH +A AQ GG FIDAEHALDP A +GV T+NLL++QPD GEQ
Sbjct: 65 YGPESSGKTTVALHAVASAQAAGGIAAFIDAEHALDPDYASKLGVDTDNLLVSQPDTGEQ 124
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RSG++D++V+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ +LS
Sbjct: 125 ALEIADLLVRSGALDIIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTGALSN 184
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T IFINQ+R K+ FG P E T GG ALKFYASVRL+++RI +K G E +G++
Sbjct: 185 SHTTAIFINQLREKIGVM-FGSP-ETTTGGKALKFYASVRLDVRRIETLKDGAEAVGNRT 242
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGK 302
VK+VKNK+APPF+TA+F++ +G GISRE +ID+ ++H K+GA +TY+ D+ +GK
Sbjct: 243 RVKVVKNKVAPPFRTAEFDIVYGGGISREGSLIDMGVEHAIIRKSGAWYTYDGDQLGQGK 302
Query: 303 EAFKQFLVENESVREELVIKLREKL 327
E + FL +N + +E+ +++EKL
Sbjct: 303 ENARNFLRDNPDLADEIEKRIKEKL 327
>gi|347727142|gb|AEP19929.1| multifunctional SOS repair factor [Bacillus aquimaris]
Length = 345
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 186/346 (53%), Positives = 247/346 (71%), Gaps = 8/346 (2%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
MS + AL AL QI FGKGSIM LG T R + +GS ALD ALG GG P+GR+
Sbjct: 1 MSDRKAALDMALKQIEKQFGKGSIMKLGEQ-TDRKIVTCPSGSLALDAALGVGGYPRGRI 59
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+E+YGPE+SGKTT+ALH IAE Q QGG FIDAEHALDP A+ +GV + LLL+QPD
Sbjct: 60 IEVYGPESSGKTTVALHAIAEVQAQGGQAAFIDAEHALDPEYAQKLGVNIDELLLSQPDT 119
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + + L+RSG+VD +V+DSVAALVPK E++GEMGDAH+ +QARLMSQALRKLS +
Sbjct: 120 GEQALEIAEALVRSGAVDAIVIDSVAALVPKAEIEGEMGDAHVGLQARLMSQALRKLSGA 179
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
++ S+TI IFINQ+R K+ FG P E T GG ALKFY+SVRL ++R +K+G E +G
Sbjct: 180 INKSKTIAIFINQIREKVGVM-FGNP-ETTPGGRALKFYSSVRLEVRRAETLKQGNEMVG 237
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF- 299
++ +K+VKNK+APPF+ A+ ++ +G+GIS+E EI+DL + K+GA ++YND
Sbjct: 238 NKTKIKVVKNKVAPPFRVAEVDIMYGEGISKEGEIVDLGSELDIVQKSGAWYSYNDERLG 297
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTE 345
+G+E K FL EN +R E+++K+RE +D +T ED E
Sbjct: 298 QGRENAKIFLKENPEMRSEIMLKIREHYGLDTGRAET----EDQAE 339
>gi|347727092|gb|AEP19904.1| multifunctional SOS repair factor [Exiguobacterium sp. N39]
Length = 349
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/343 (53%), Positives = 252/343 (73%), Gaps = 4/343 (1%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
MS + AL+ AL QI FGKGSIM LG + T + V V +GS ALDIALG GG P+GRV
Sbjct: 1 MSDRKQALEMALRQIEKQFGKGSIMRLGEN-TDQQVSVTPSGSIALDIALGAGGYPRGRV 59
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+E+YGPE+SGKTT+ALH IAE Q++GG F+DAEHALDP A+ +GV + LLL+QPD
Sbjct: 60 IEVYGPESSGKTTVALHAIAEVQKRGGQAAFVDAEHALDPKYAQNLGVNIDELLLSQPDT 119
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + + L+RSG+VD++VVDSVAALVPK E++GEMGD+H+ +QARLMSQALRKLS +
Sbjct: 120 GEQALEIAEALVRSGAVDILVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLSGA 179
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
+ S+TI+IFINQ+R K+ FG P E T GG ALKFY+SVRL ++R +K+G++ +G
Sbjct: 180 TNKSKTIVIFINQIREKIGIM-FGNP-ETTPGGRALKFYSSVRLEVRRAETLKQGQDMVG 237
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF- 299
++ +K+VKNK+APPFKTA+ ++ +G+GISRE E+ID+ K+GA ++YN+
Sbjct: 238 NRTKIKVVKNKIAPPFKTAEVDIMYGEGISREGELIDIGADLDIVQKSGAWYSYNEERLG 297
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDED 342
+G+E KQ++ EN SV + ++R+ ++ ++ T D D
Sbjct: 298 QGRENAKQYMKENPSVAASVEERIRDHYGLNGEKTVTVEADND 340
>gi|319408737|emb|CBI82394.1| RecA protein [Bartonella schoenbuchensis R1]
Length = 347
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 185/324 (57%), Positives = 239/324 (73%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI SFGKGSIM LG+ + + TGS +LDIALG GGLPKGR++EI
Sbjct: 3 KTKALDSALSQIERSFGKGSIMRLGQKEQVVEIETIPTGSLSLDIALGVGGLPKGRIIEI 62
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH IAEAQ+ GG C F+DAEHALDP A +GVK E+LL++QPD GEQ
Sbjct: 63 YGPESSGKTTLALHAIAEAQKSGGVCAFVDAEHALDPIYARKLGVKLEDLLISQPDTGEQ 122
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + +TL+RSG++DV+VVDSVAAL P+ E+DGEM D+ +QARLMS+ALRKL+ S+
Sbjct: 123 ALEIAETLVRSGAIDVLVVDSVAALTPRAEIDGEMNDSVPGLQARLMSKALRKLTASIFR 182
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+R+G +K + IG+Q
Sbjct: 183 SNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRVGAIKDRDMVIGNQT 240
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G+GIS+ E+IDL +K K+G+ F+YN + +G+
Sbjct: 241 RVKVVKNKLAPPFKQVEFDIIYGEGISKVGELIDLGVKAGIVEKSGSWFSYNSQRLGQGR 300
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E KQFL EN + E+ LR+
Sbjct: 301 ENAKQFLHENAEIATEIESALRQN 324
>gi|298346680|ref|YP_003719367.1| recombination protein A [Mobiluncus curtisii ATCC 43063]
gi|304389611|ref|ZP_07371573.1| recombination protein A [Mobiluncus curtisii subsp. curtisii ATCC
35241]
gi|315656854|ref|ZP_07909741.1| recombination protein A [Mobiluncus curtisii subsp. holmesii ATCC
35242]
gi|298236741|gb|ADI67873.1| recombination protein A [Mobiluncus curtisii ATCC 43063]
gi|304327164|gb|EFL94400.1| recombination protein A [Mobiluncus curtisii subsp. curtisii ATCC
35241]
gi|315492809|gb|EFU82413.1| recombination protein A [Mobiluncus curtisii subsp. holmesii ATCC
35242]
Length = 370
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/357 (51%), Positives = 256/357 (71%), Gaps = 4/357 (1%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
ALQ AL QI FGKGS+M LG S +V V+ TGS ALD+ALG GGLP+GR++EIYGP
Sbjct: 9 ALQTALGQIDKQFGKGSVMRLGDSAVNTNVSVIPTGSVALDVALGIGGLPRGRIIEIYGP 68
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTT+ALH +A AQ+QGG FIDAEHALDP A+ +GV +NLL++QPD GEQAL
Sbjct: 69 ESSGKTTVALHAVANAQKQGGNAAFIDAEHALDPVYAQKLGVDIDNLLVSQPDTGEQALE 128
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ D LIRSG +D++V+DSVAALVPK E++G+MGD+H+ +QARLMSQALRK++ +LS + T
Sbjct: 129 IADMLIRSGGLDIIVIDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKITGALSATGT 188
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
IFINQ+R K+ F FG P E T GG ALKFYASVR++++RI +K+ + +G++ K
Sbjct: 189 TAIFINQLREKIGVF-FGSP-ETTTGGKALKFYASVRIDVRRIETLKENGDAVGNRTRAK 246
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGKEAF 305
IVKNK+APPF+ A+F++ +G+GISRE +IDL + +K+G+ FTY + +GKE
Sbjct: 247 IVKNKMAPPFRQAEFDIMYGQGISREGGLIDLGVDSGIVTKSGSWFTYGEMQLGQGKENV 306
Query: 306 KQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETVSTISPDSTDEEAAA 362
++FLV+N + E+ K+ L V ++P E + + ++ + D ++ A+
Sbjct: 307 RKFLVDNPELSAEIEDKILIALGV-REDPNAESQPESAASQKLAVVMDDEAADKGAS 362
>gi|403530664|ref|YP_006665193.1| recombinase A [Bartonella quintana RM-11]
gi|403232735|gb|AFR26478.1| recombinase A [Bartonella quintana RM-11]
Length = 347
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 187/324 (57%), Positives = 238/324 (73%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI SFGKGSIM LG+ + + TGS +LDIALG GGLPKGR+VEI
Sbjct: 3 KTKALDAALSQIERSFGKGSIMRLGQKEQVVEIETIPTGSLSLDIALGVGGLPKGRIVEI 62
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH IAEAQ+ GG C FIDAEHALDP A +GV ENL ++QPD GEQ
Sbjct: 63 YGPESSGKTTLALHAIAEAQKNGGVCAFIDAEHALDPIYARKLGVDLENLFISQPDTGEQ 122
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + +TL+RSG+VDV+VVDSVAAL P+ E+DGEMGDA +QARLMS+ALRKL+ S+
Sbjct: 123 ALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDALPGLQARLMSKALRKLTASIFR 182
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+R+G +K + +G+Q
Sbjct: 183 SNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRVGSIKDRDMIVGNQT 240
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G+GIS+ E+IDL +K K+G+ F+YN + +G+
Sbjct: 241 RVKVVKNKLAPPFKQVEFDIIYGEGISKLGELIDLGVKVGIVEKSGSWFSYNSQRLGQGR 300
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E KQFL E+ + E+ LR+
Sbjct: 301 ENAKQFLREHAEIATEIETALRQN 324
>gi|251773419|gb|EES53968.1| recA protein [Leptospirillum ferrodiazotrophum]
Length = 357
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/326 (56%), Positives = 242/326 (74%), Gaps = 3/326 (0%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVV 61
S K +L AL QI FGKGSIM +G+ PV+S+GS ALDIALG GG PKGR++
Sbjct: 6 SNKQRSLDLALSQIEKQFGKGSIMRMGKDAPIIETPVISSGSLALDIALGIGGYPKGRII 65
Query: 62 EIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCG 121
EIYGPE+SGKTTLALH IAE ++ G FIDAEHALD A +GVKTE+LL+AQPD G
Sbjct: 66 EIYGPESSGKTTLALHAIAEVHKKNGMAAFIDAEHALDLGYARKLGVKTEDLLIAQPDSG 125
Query: 122 EQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSL 181
EQAL + +TL+RSGS+D++VVDSVAALVPK EL+G+MGD+HM +QARLMSQALRKL+ S+
Sbjct: 126 EQALEIAETLVRSGSLDLIVVDSVAALVPKAELEGDMGDSHMGLQARLMSQALRKLTSSI 185
Query: 182 SLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGS 241
S S T++IFINQ+R K+ FG P E T GGNALKFYAS RL+I+RI +K+G+ +G+
Sbjct: 186 SKSSTVVIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASQRLDIRRIESIKEGDHVLGN 243
Query: 242 QIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-R 300
++ VK+VKNK+APPF+ A+F++ F +G+S E+IDL ++H K+G+ ++Y +
Sbjct: 244 RVRVKVVKNKMAPPFRQAEFDISFNEGVSSVGELIDLGVEHGLLEKSGSWYSYGTEKIGQ 303
Query: 301 GKEAFKQFLVENESVREELVIKLREK 326
GKEA K +L + + + L +REK
Sbjct: 304 GKEAVKGYLKAHPDLAKSLDRAIREK 329
>gi|453073980|ref|ZP_21976778.1| recombinase A [Rhodococcus triatomae BKS 15-14]
gi|452765466|gb|EME23723.1| recombinase A [Rhodococcus triatomae BKS 15-14]
Length = 347
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/325 (56%), Positives = 249/325 (76%), Gaps = 4/325 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
+D AL+ AL QI +FGKGS+M LG + + V+ TGS ALD+ALG GGLP+GRVVEI
Sbjct: 8 RDKALELALAQIDKNFGKGSVMRLGEEAR-QPISVIPTGSIALDVALGIGGLPRGRVVEI 66
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ALH +A AQ GG FIDAEHALDP A +GV T+ LL++QPD GEQ
Sbjct: 67 YGPESSGKTTVALHAVANAQAAGGIAAFIDAEHALDPEYARKLGVDTDALLVSQPDTGEQ 126
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D LIRSG++D++VVDSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ +L+
Sbjct: 127 ALEIADMLIRSGALDIIVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTGALNN 186
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T IFINQ+R K+ FG P E T GG ALKFY+SVRL+++RI +K G + +G++
Sbjct: 187 SGTTAIFINQLREKIGVM-FGSP-ETTTGGKALKFYSSVRLDVRRIETLKDGGDAVGNRT 244
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRGK 302
VK+VKNK++PPFK A+F++ +G+GIS+E +ID+ ++H F K+G+ FTY D+ +GK
Sbjct: 245 RVKVVKNKVSPPFKQAEFDILYGQGISKEGSLIDMGVEHGFIRKSGSWFTYEGDQLGQGK 304
Query: 303 EAFKQFLVENESVREELVIKLREKL 327
E ++FL+EN +R+E+ K++EKL
Sbjct: 305 ENARKFLLENTDIRDEIEKKIKEKL 329
>gi|333897098|ref|YP_004470972.1| recombinase A [Thermoanaerobacterium xylanolyticum LX-11]
gi|333112363|gb|AEF17300.1| Protein recA [Thermoanaerobacterium xylanolyticum LX-11]
Length = 343
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/342 (52%), Positives = 259/342 (75%), Gaps = 4/342 (1%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
M +K AL A+ QI FGKGSIM LG + + ++ V+STGS LDIALG GG+P+GR+
Sbjct: 1 MIEKQKALDMAISQIERQFGKGSIMRLGDN-SKLNIDVISTGSIDLDIALGVGGVPRGRI 59
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+EI+GPE+SGKTT+ALH++AEAQ+ GG FIDAEHALDP A+ +GVK +NLL++QPD
Sbjct: 60 IEIFGPESSGKTTIALHILAEAQKLGGTGAFIDAEHALDPVYAKNVGVKIDNLLVSQPDT 119
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL +V+ L+RSG+VDV+V+DSVAALVPK E+DG+MGDAH+ +QARLMSQALRKLS
Sbjct: 120 GEQALEIVEALVRSGAVDVIVIDSVAALVPKAEIDGDMGDAHVGLQARLMSQALRKLSGV 179
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
+S ++++ +FINQ+R K+ FG P E T GG ALKFY+++RL+++++ +K+G + +G
Sbjct: 180 ISKTKSVAVFINQLREKVGVM-FGNP-ETTPGGRALKFYSTIRLDVRKVDGIKQGNDIVG 237
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYND-RNF 299
++ VK+VKNK+APPFK A+F++ +G+GISRE I+DLA K+GA ++Y D R
Sbjct: 238 NRTRVKVVKNKVAPPFKQAEFDIMYGEGISREGSILDLAASIDIIDKSGAWYSYGDIRLG 297
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDE 341
+G+E KQ+L EN+++ +E+ K+RE + ++ + DE
Sbjct: 298 QGRENAKQYLKENKAIADEIENKIRENFNLLVTTKKSIIDDE 339
>gi|78173105|gb|ABB29469.1| RecA [Streptomyces argillaceus]
Length = 376
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/330 (55%), Positives = 250/330 (75%), Gaps = 6/330 (1%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLG-RSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
+ ++ AL AL QI FGKG++M +G RS P + V+ TGS ALD+ALG GGLP+GRV
Sbjct: 4 TDREKALDAALAQIERQFGKGAVMRMGDRSKEP--IEVIPTGSTALDVALGVGGLPRGRV 61
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+E+YGPE+SGKTTL LH +A AQR GG F+DAEHALDP A+ +GV +NL+L+QPD
Sbjct: 62 IEVYGPESSGKTTLTLHAVANAQRAGGQVAFVDAEHALDPEYAQKLGVDIDNLILSQPDN 121
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL +VD L+RSG++D++V+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ +
Sbjct: 122 GEQALEIVDMLVRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITSA 181
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
L+ S+T IFINQ+R K+ FG P E T GG ALKFYASVRL+I+RI +K G + +G
Sbjct: 182 LNQSKTTAIFINQLREKIGVM-FGSP-ETTTGGRALKFYASVRLDIRRIETLKDGTDAVG 239
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNF 299
++ VK+VKNK+APPFK A+F++ +G+GISRE +ID+ ++H F KAGA +TY D+
Sbjct: 240 NRTRVKVVKNKVAPPFKQAEFDILYGQGISREGGLIDMGVEHGFVRKAGAWYTYEGDQLG 299
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVV 329
+GKE + FL +N + E+ K++EKL V
Sbjct: 300 QGKENARNFLKDNPDLANEIERKIKEKLGV 329
>gi|90423078|ref|YP_531448.1| recombinase A [Rhodopseudomonas palustris BisB18]
gi|90105092|gb|ABD87129.1| RecA protein [Rhodopseudomonas palustris BisB18]
Length = 363
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/323 (56%), Positives = 241/323 (74%), Gaps = 3/323 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGS+M LG++ + +S+GS LDIALG GGLPKGRVVEI
Sbjct: 17 KTKALAAALSQIERQFGKGSVMKLGKNDRSMDIETISSGSLGLDIALGVGGLPKGRVVEI 76
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH AEAQ++GG C FIDAEHALDP A +GV + LL++QPD GEQ
Sbjct: 77 YGPESSGKTTLALHCAAEAQKKGGICAFIDAEHALDPVYARKLGVNVDELLISQPDHGEQ 136
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV++VDSVAALVP+ EL+GEMGDA +QARLMSQALRKL+ S++
Sbjct: 137 ALEIADTLVRSGAVDVLIVDSVAALVPRAELEGEMGDALPGLQARLMSQALRKLTASINK 196
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ +G P E T GGNALKFYASVRL+I+RIG +K+ +E +G+Q
Sbjct: 197 SNTMVIFINQIRMKIGVM-YGSP-ETTTGGNALKFYASVRLDIRRIGQIKERDEVVGNQT 254
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G+G+S+ EI+DL +K K+GA F+Y+ + +G+
Sbjct: 255 RVKVVKNKLAPPFKQVEFDIMYGEGVSKMGEILDLGVKAGIVDKSGAWFSYDSQRLGQGR 314
Query: 303 EAFKQFLVENESVREELVIKLRE 325
E K FL N + ++ +R+
Sbjct: 315 ENSKAFLKANPDMTAKIEAAIRQ 337
>gi|408359052|gb|AFU55263.1| recombinase A [Xenorhabdus stockiae]
Length = 358
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 195/350 (55%), Positives = 248/350 (70%), Gaps = 9/350 (2%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + + V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGENRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A+ +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQREGRTCAFIDAEHALDPVYAKKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV+VVDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALSRSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+R G VK +E +G++
Sbjct: 185 NSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRTGSVKNSDEVVGTE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+ E+IDL +KHK KAGA ++YN D+ +G
Sbjct: 243 TRVKVVKNKVAAPFKQAEFQILYGEGINTYGELIDLGVKHKMVEKAGAWYSYNGDKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTD-----EDSTEE 346
K +L E+ + EL KLRE L+ + +A D ED+ EE
Sbjct: 303 KANATNYLKEHPEIASELDKKLRELLLNNAGGFSSAAEDYVTDYEDNAEE 352
>gi|283835572|ref|ZP_06355313.1| protein RecA [Citrobacter youngae ATCC 29220]
gi|291068782|gb|EFE06891.1| protein RecA [Citrobacter youngae ATCC 29220]
Length = 354
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/349 (55%), Positives = 249/349 (71%), Gaps = 5/349 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV+VVDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+G+ +GS+
Sbjct: 185 QSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKEGDNVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +K K KAGA ++YN +G
Sbjct: 243 TRVKVVKNKIAAPFKQAEFQILYGEGINFYGELVDLGVKEKLIEKAGAWYSYNGEKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETVST 350
K +L EN + +E+ KLRE L++++++ + +DS E+ T
Sbjct: 303 KANATNWLKENPATAKEIEKKLRE-LLLNNQDSTPDFSVDDSGEDVAET 350
>gi|160880571|ref|YP_001559539.1| recA protein [Clostridium phytofermentans ISDg]
gi|160429237|gb|ABX42800.1| recA protein [Clostridium phytofermentans ISDg]
Length = 347
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 180/321 (56%), Positives = 246/321 (76%), Gaps = 3/321 (0%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL+ AL QI +GKGS+M LG + T +V V TGS +LDIALG GG+PKGRVVE+YGP
Sbjct: 9 ALESALAQIEKQYGKGSVMKLGETGTRMNVETVPTGSISLDIALGLGGIPKGRVVEVYGP 68
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTT+ALH++AE Q++GG FIDAEHALDP A+ IGV +NL ++QPD GEQAL
Sbjct: 69 ESSGKTTVALHMVAEVQKRGGIAGFIDAEHALDPVYAKNIGVDIDNLYISQPDNGEQALE 128
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ +T++RSG+VD+V+VDSVAALVPK E+DG+MGD+H+ +QARLMSQALRKL+ +S S
Sbjct: 129 ITETMVRSGAVDIVIVDSVAALVPKAEIDGDMGDSHVGLQARLMSQALRKLTAVISKSNC 188
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
I+IFINQ+R K+ FG P E T GG ALKFY+S+RL+++RI +K G + +G++ +K
Sbjct: 189 IVIFINQLREKVGVM-FGNP-ETTTGGRALKFYSSIRLDVRRIEALKLGGDIVGNRTRIK 246
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGKEAF 305
+VKNK+APPFK A+F++ FG+GISRE +I+DLA K+GA + YN+ +G+E
Sbjct: 247 VVKNKIAPPFKEAEFDIMFGQGISREGDILDLAANEGIIVKSGAWYAYNESKIGQGRENA 306
Query: 306 KQFLVENESVREELVIKLREK 326
K FL EN ++ EE+ +++RE+
Sbjct: 307 KVFLKENPNILEEVEVQVRER 327
>gi|452960781|gb|EME66096.1| recombinase A [Rhodococcus ruber BKS 20-38]
Length = 346
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/325 (56%), Positives = 249/325 (76%), Gaps = 4/325 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
+D AL+ AL QI SFGKGS+M LG + + + V+ TGS ALD+ALG GGLP+GRVVEI
Sbjct: 8 RDKALELALAQIDKSFGKGSVMRLGEE-SRQPIAVIPTGSIALDVALGIGGLPRGRVVEI 66
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ALH +A AQ GG FIDAEHALDP A +GV T+ LL++QPD GEQ
Sbjct: 67 YGPESSGKTTVALHAVANAQAAGGIAAFIDAEHALDPEYARKLGVDTDALLVSQPDTGEQ 126
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D LIRSG++D++VVDSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ +L+
Sbjct: 127 ALEIADMLIRSGALDIIVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTGALNN 186
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T IFINQ+R K+ FG P E T GG ALKFYASVRL+++RI +K G + +G++
Sbjct: 187 SGTTAIFINQLREKIGVM-FGSP-ETTTGGKALKFYASVRLDVRRIETLKDGSDAVGNRT 244
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRGK 302
VK+VKNK++PPFK A+F++ +G+GIS+E +ID+ ++ F K+G+ +TY D+ +GK
Sbjct: 245 RVKVVKNKVSPPFKQAEFDILYGQGISKEGSLIDMGVEQGFIRKSGSWYTYEGDQLGQGK 304
Query: 303 EAFKQFLVENESVREELVIKLREKL 327
E ++FL+EN +R+E+ K++EKL
Sbjct: 305 ENARKFLLENTDIRDEIEKKIKEKL 329
>gi|254448272|ref|ZP_05061734.1| protein RecA [gamma proteobacterium HTCC5015]
gi|198262139|gb|EDY86422.1| protein RecA [gamma proteobacterium HTCC5015]
Length = 348
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/323 (56%), Positives = 245/323 (75%), Gaps = 4/323 (1%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL AL QI FGKGS+M +G V R++ +STGS LD+ALG GGLPKGRVVEIYGP
Sbjct: 8 ALAAALGQIERQFGKGSVMRMGDGVI-RNIESISTGSLTLDVALGIGGLPKGRVVEIYGP 66
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTT+ L V+AE Q+ GG F+DAEHALDP+ A+ +GV + LL++QPD GEQAL
Sbjct: 67 ESSGKTTMTLQVVAECQKAGGTAAFVDAEHALDPTYAKKLGVDVDELLVSQPDTGEQALE 126
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ D L+RS +VDVVV+DSVAAL PK E++GEMGD+H+ +QARLMSQALRKL+ ++ S T
Sbjct: 127 IADMLVRSSAVDVVVIDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKRSNT 186
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
++IFINQ+R K+ FG P E T GGNALKFY+SVRL+I+RIG +KKG+E +G++ VK
Sbjct: 187 LVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYSSVRLDIRRIGAIKKGDEVLGNETKVK 244
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGKEAF 305
+VKNK APPFK A+FE+ +G+G+S E E++DL ++HK KAGA ++ N +R +GK+
Sbjct: 245 VVKNKTAPPFKEARFEILYGEGVSFEGELLDLGVEHKLVDKAGAWYSCNGERIGQGKDNA 304
Query: 306 KQFLVENESVREELVIKLREKLV 328
+ +L E+ + EL KLR+ L+
Sbjct: 305 RNYLKEHPEMAAELNSKLRDILL 327
>gi|402819550|ref|ZP_10869118.1| hypothetical protein IMCC14465_03520 [alpha proteobacterium
IMCC14465]
gi|402511697|gb|EJW21958.1| hypothetical protein IMCC14465_03520 [alpha proteobacterium
IMCC14465]
Length = 363
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/344 (53%), Positives = 249/344 (72%), Gaps = 3/344 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
++ AL+ AL QI ++GKGS+M LG + + TGS LDIALG GGLP+GR++EI
Sbjct: 15 RNKALEAALGQIERNYGKGSVMKLGDPKNIVEIGSIPTGSLGLDIALGIGGLPQGRIIEI 74
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH +AEAQ++GG C FIDAEHALDP A +G E LL++QPD GEQ
Sbjct: 75 YGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPLYASKLGADVEELLISQPDNGEQ 134
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+V+DSVAAL P+ EL+G+MGD+ +QARLMSQALRKL+ S+S
Sbjct: 135 ALEIADTLVRSGAIDVLVIDSVAALTPRAELEGDMGDSLPGLQARLMSQALRKLTASISK 194
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ FG P E T GGNALKFYAS RL+I+RIG +K EE +G+Q
Sbjct: 195 SNTMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASCRLDIRRIGAIKDREEVVGNQT 252
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPF+ +F++ +G+GIS+ E+IDL +K + K+G+ ++Y D+ +GK
Sbjct: 253 RVKVVKNKVAPPFRVVEFDIMYGEGISKTGELIDLGVKAEVVDKSGSWYSYGDQRIGQGK 312
Query: 303 EAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEE 346
E +QFL +N + E+ K+R + EP D D+ +E
Sbjct: 313 ENARQFLKDNPEIAAEIEEKVRADAGLVDIEPLKPEDDYDAGDE 356
>gi|169633342|ref|YP_001707078.1| recombinase A [Acinetobacter baumannii SDF]
gi|169795694|ref|YP_001713487.1| recombinase A [Acinetobacter baumannii AYE]
gi|184158405|ref|YP_001846744.1| recombinase A [Acinetobacter baumannii ACICU]
gi|213158361|ref|YP_002319659.1| recombinase A [Acinetobacter baumannii AB0057]
gi|215483180|ref|YP_002325387.1| protein RecA [Acinetobacter baumannii AB307-0294]
gi|229577096|ref|YP_001084991.2| recombinase A [Acinetobacter baumannii ATCC 17978]
gi|239501635|ref|ZP_04660945.1| recombinase A [Acinetobacter baumannii AB900]
gi|260554756|ref|ZP_05826977.1| recA protein [Acinetobacter baumannii ATCC 19606 = CIP 70.34]
gi|301348114|ref|ZP_07228855.1| recombinase A [Acinetobacter baumannii AB056]
gi|301512103|ref|ZP_07237340.1| recombinase A [Acinetobacter baumannii AB058]
gi|301597370|ref|ZP_07242378.1| recombinase A [Acinetobacter baumannii AB059]
gi|332852512|ref|ZP_08434251.1| RecA protein [Acinetobacter baumannii 6013150]
gi|332871284|ref|ZP_08439833.1| RecA protein [Acinetobacter baumannii 6013113]
gi|332873896|ref|ZP_08441836.1| RecA protein [Acinetobacter baumannii 6014059]
gi|384132509|ref|YP_005515121.1| recA [Acinetobacter baumannii 1656-2]
gi|384143510|ref|YP_005526220.1| recombinase A [Acinetobacter baumannii MDR-ZJ06]
gi|385237835|ref|YP_005799174.1| recombinase A [Acinetobacter baumannii TCDC-AB0715]
gi|387123646|ref|YP_006289528.1| protein RecA [Acinetobacter baumannii MDR-TJ]
gi|407933108|ref|YP_006848751.1| recA [Acinetobacter baumannii TYTH-1]
gi|416148628|ref|ZP_11602455.1| recombinase A [Acinetobacter baumannii AB210]
gi|417549009|ref|ZP_12200089.1| RecA protein [Acinetobacter baumannii Naval-18]
gi|417553293|ref|ZP_12204363.1| RecA protein [Acinetobacter baumannii Naval-81]
gi|417562600|ref|ZP_12213479.1| RecA protein [Acinetobacter baumannii OIFC137]
gi|417567491|ref|ZP_12218363.1| RecA protein [Acinetobacter baumannii OIFC143]
gi|417568604|ref|ZP_12219467.1| RecA protein [Acinetobacter baumannii OIFC189]
gi|417572576|ref|ZP_12223430.1| RecA protein [Acinetobacter baumannii Canada BC-5]
gi|417578012|ref|ZP_12228849.1| RecA protein [Acinetobacter baumannii Naval-17]
gi|417871744|ref|ZP_12516671.1| recombinase A [Acinetobacter baumannii ABNIH1]
gi|417873723|ref|ZP_12518588.1| recombinase A [Acinetobacter baumannii ABNIH2]
gi|417882601|ref|ZP_12526890.1| recombinase A [Acinetobacter baumannii ABNIH4]
gi|421200286|ref|ZP_15657446.1| RecA protein [Acinetobacter baumannii OIFC109]
gi|421204120|ref|ZP_15661249.1| recombinase A [Acinetobacter baumannii AC12]
gi|421457340|ref|ZP_15906677.1| RecA protein [Acinetobacter baumannii IS-123]
gi|421534471|ref|ZP_15980744.1| recombinase A [Acinetobacter baumannii AC30]
gi|421621683|ref|ZP_16062598.1| RecA protein [Acinetobacter baumannii OIFC074]
gi|421627143|ref|ZP_16067956.1| RecA protein [Acinetobacter baumannii OIFC098]
gi|421630008|ref|ZP_16070723.1| RecA protein [Acinetobacter baumannii OIFC180]
gi|421633702|ref|ZP_16074331.1| RecA protein [Acinetobacter baumannii Naval-13]
gi|421644384|ref|ZP_16084868.1| RecA protein [Acinetobacter baumannii IS-235]
gi|421645926|ref|ZP_16086381.1| RecA protein [Acinetobacter baumannii IS-251]
gi|421651720|ref|ZP_16092087.1| RecA protein [Acinetobacter baumannii OIFC0162]
gi|421658484|ref|ZP_16098717.1| RecA protein [Acinetobacter baumannii Naval-83]
gi|421664217|ref|ZP_16104357.1| RecA protein [Acinetobacter baumannii OIFC110]
gi|421675545|ref|ZP_16115466.1| RecA protein [Acinetobacter baumannii OIFC065]
gi|421677010|ref|ZP_16116904.1| RecA protein [Acinetobacter baumannii OIFC111]
gi|421686624|ref|ZP_16126371.1| RecA protein [Acinetobacter baumannii IS-143]
gi|421691636|ref|ZP_16131295.1| RecA protein [Acinetobacter baumannii IS-116]
gi|421696007|ref|ZP_16135603.1| RecA protein [Acinetobacter baumannii WC-692]
gi|421698740|ref|ZP_16138279.1| RecA protein [Acinetobacter baumannii IS-58]
gi|421703881|ref|ZP_16143337.1| recombinase A [Acinetobacter baumannii ZWS1122]
gi|421707664|ref|ZP_16147055.1| recombinase A [Acinetobacter baumannii ZWS1219]
gi|421788299|ref|ZP_16224603.1| RecA protein [Acinetobacter baumannii Naval-82]
gi|421794625|ref|ZP_16230723.1| RecA protein [Acinetobacter baumannii Naval-2]
gi|421795586|ref|ZP_16231668.1| RecA protein [Acinetobacter baumannii Naval-21]
gi|421801278|ref|ZP_16237240.1| RecA protein [Acinetobacter baumannii Canada BC1]
gi|421804378|ref|ZP_16240288.1| RecA protein [Acinetobacter baumannii WC-A-694]
gi|424052069|ref|ZP_17789601.1| protein recA [Acinetobacter baumannii Ab11111]
gi|424059633|ref|ZP_17797124.1| protein recA [Acinetobacter baumannii Ab33333]
gi|424063571|ref|ZP_17801056.1| protein recA [Acinetobacter baumannii Ab44444]
gi|425748699|ref|ZP_18866683.1| RecA protein [Acinetobacter baumannii WC-348]
gi|425751868|ref|ZP_18869809.1| RecA protein [Acinetobacter baumannii Naval-113]
gi|445405220|ref|ZP_21431197.1| RecA protein [Acinetobacter baumannii Naval-57]
gi|445461237|ref|ZP_21448650.1| RecA protein [Acinetobacter baumannii OIFC047]
gi|445471296|ref|ZP_21452049.1| RecA protein [Acinetobacter baumannii OIFC338]
gi|445475945|ref|ZP_21453578.1| RecA protein [Acinetobacter baumannii Naval-78]
gi|445492094|ref|ZP_21460041.1| RecA protein [Acinetobacter baumannii AA-014]
gi|226737747|sp|B7H1V4.1|RECA_ACIB3 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|226737748|sp|B7I9U0.1|RECA_ACIB5 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|238685519|sp|A3M645.2|RECA_ACIBT RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|238688039|sp|B0V6E0.1|RECA_ACIBY RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|238688140|sp|B0VMV7.1|RECA_ACIBS RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|238691026|sp|B2I316.1|RECA_ACIBC RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|169148621|emb|CAM86487.1| DNA strand exchange and recombination protein with protease and
nuclease activity [Acinetobacter baumannii AYE]
gi|169152134|emb|CAP01033.1| DNA strand exchange and recombination protein with protease and
nuclease activity [Acinetobacter baumannii]
gi|183209999|gb|ACC57397.1| RecA/RadA recombinase [Acinetobacter baumannii ACICU]
gi|193077556|gb|ABO12389.2| DNA strand exchange and recombination protein [Acinetobacter
baumannii ATCC 17978]
gi|213057521|gb|ACJ42423.1| DNA strand exchange and recombination protein RecA [Acinetobacter
baumannii AB0057]
gi|213987860|gb|ACJ58159.1| protein RecA [Acinetobacter baumannii AB307-0294]
gi|260411298|gb|EEX04595.1| recA protein [Acinetobacter baumannii ATCC 19606 = CIP 70.34]
gi|322508729|gb|ADX04183.1| recA [Acinetobacter baumannii 1656-2]
gi|323518334|gb|ADX92715.1| recombinase A [Acinetobacter baumannii TCDC-AB0715]
gi|332729214|gb|EGJ60557.1| RecA protein [Acinetobacter baumannii 6013150]
gi|332731568|gb|EGJ62854.1| RecA protein [Acinetobacter baumannii 6013113]
gi|332737882|gb|EGJ68769.1| RecA protein [Acinetobacter baumannii 6014059]
gi|333364897|gb|EGK46911.1| recombinase A [Acinetobacter baumannii AB210]
gi|342224582|gb|EGT89608.1| recombinase A [Acinetobacter baumannii ABNIH1]
gi|342230591|gb|EGT95422.1| recombinase A [Acinetobacter baumannii ABNIH2]
gi|342237454|gb|EGU01923.1| recombinase A [Acinetobacter baumannii ABNIH4]
gi|347594003|gb|AEP06724.1| recombinase A [Acinetobacter baumannii MDR-ZJ06]
gi|385878138|gb|AFI95233.1| protein RecA [Acinetobacter baumannii MDR-TJ]
gi|395525182|gb|EJG13271.1| RecA protein [Acinetobacter baumannii OIFC137]
gi|395553163|gb|EJG19171.1| RecA protein [Acinetobacter baumannii OIFC143]
gi|395554899|gb|EJG20901.1| RecA protein [Acinetobacter baumannii OIFC189]
gi|395563887|gb|EJG25539.1| RecA protein [Acinetobacter baumannii OIFC109]
gi|395568709|gb|EJG29379.1| RecA protein [Acinetobacter baumannii Naval-17]
gi|398326280|gb|EJN42429.1| recombinase A [Acinetobacter baumannii AC12]
gi|400207064|gb|EJO38035.1| RecA protein [Acinetobacter baumannii IS-123]
gi|400208144|gb|EJO39114.1| RecA protein [Acinetobacter baumannii Canada BC-5]
gi|400386977|gb|EJP50050.1| RecA protein [Acinetobacter baumannii Naval-18]
gi|400393552|gb|EJP60598.1| RecA protein [Acinetobacter baumannii Naval-81]
gi|404562245|gb|EKA67469.1| RecA protein [Acinetobacter baumannii IS-116]
gi|404563990|gb|EKA69184.1| RecA protein [Acinetobacter baumannii WC-692]
gi|404567731|gb|EKA72848.1| RecA protein [Acinetobacter baumannii IS-143]
gi|404572059|gb|EKA77104.1| RecA protein [Acinetobacter baumannii IS-58]
gi|404664575|gb|EKB32553.1| protein recA [Acinetobacter baumannii Ab11111]
gi|404670371|gb|EKB38263.1| protein recA [Acinetobacter baumannii Ab33333]
gi|404674163|gb|EKB41923.1| protein recA [Acinetobacter baumannii Ab44444]
gi|407191431|gb|EKE62632.1| recombinase A [Acinetobacter baumannii ZWS1122]
gi|407191770|gb|EKE62960.1| recombinase A [Acinetobacter baumannii ZWS1219]
gi|407901689|gb|AFU38520.1| recA [Acinetobacter baumannii TYTH-1]
gi|408505709|gb|EKK07429.1| RecA protein [Acinetobacter baumannii IS-235]
gi|408507653|gb|EKK09347.1| RecA protein [Acinetobacter baumannii OIFC0162]
gi|408517919|gb|EKK19454.1| RecA protein [Acinetobacter baumannii IS-251]
gi|408693522|gb|EKL39125.1| RecA protein [Acinetobacter baumannii OIFC098]
gi|408697280|gb|EKL42795.1| RecA protein [Acinetobacter baumannii OIFC074]
gi|408699357|gb|EKL44837.1| RecA protein [Acinetobacter baumannii OIFC180]
gi|408706232|gb|EKL51556.1| RecA protein [Acinetobacter baumannii Naval-13]
gi|408709918|gb|EKL55157.1| RecA protein [Acinetobacter baumannii Naval-83]
gi|408712514|gb|EKL57697.1| RecA protein [Acinetobacter baumannii OIFC110]
gi|409987676|gb|EKO43856.1| recombinase A [Acinetobacter baumannii AC30]
gi|410382476|gb|EKP35030.1| RecA protein [Acinetobacter baumannii OIFC065]
gi|410393667|gb|EKP46019.1| RecA protein [Acinetobacter baumannii OIFC111]
gi|410394243|gb|EKP46581.1| RecA protein [Acinetobacter baumannii Naval-2]
gi|410401536|gb|EKP53676.1| RecA protein [Acinetobacter baumannii Naval-21]
gi|410403507|gb|EKP55599.1| RecA protein [Acinetobacter baumannii Naval-82]
gi|410405932|gb|EKP57966.1| RecA protein [Acinetobacter baumannii Canada BC1]
gi|410411749|gb|EKP63618.1| RecA protein [Acinetobacter baumannii WC-A-694]
gi|425490744|gb|EKU57039.1| RecA protein [Acinetobacter baumannii WC-348]
gi|425499624|gb|EKU65656.1| RecA protein [Acinetobacter baumannii Naval-113]
gi|444763333|gb|ELW87669.1| RecA protein [Acinetobacter baumannii AA-014]
gi|444771731|gb|ELW95856.1| RecA protein [Acinetobacter baumannii OIFC047]
gi|444772036|gb|ELW96160.1| RecA protein [Acinetobacter baumannii OIFC338]
gi|444778489|gb|ELX02501.1| RecA protein [Acinetobacter baumannii Naval-78]
gi|444781970|gb|ELX05881.1| RecA protein [Acinetobacter baumannii Naval-57]
gi|452952511|gb|EME57942.1| recombinase A [Acinetobacter baumannii MSP4-16]
Length = 349
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/341 (53%), Positives = 243/341 (71%), Gaps = 4/341 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K ALQ AL QI FGK ++M LG + T + V VSTGS LDIALG GGLPKGR++E
Sbjct: 4 NKSKALQAALSQIEKQFGKNTVMRLGDN-TVQAVEAVSTGSLTLDIALGIGGLPKGRIIE 62
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTT+ L IA+ Q+ GG C FIDAEHALDP A +GV +NLL++QPD GE
Sbjct: 63 IYGPESSGKTTMTLQAIAQCQKSGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDNGE 122
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L+RSG++D++VVDSVAAL PK E++GEMGD+HM +QARLMSQALRK++ +
Sbjct: 123 QALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAK 182
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+G+E +GS+
Sbjct: 183 RSNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGQVKEGDEIVGSE 240
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK+VKNK+APPFK A F++ +GKG ++ E++DLA++ KAGA ++Y +G
Sbjct: 241 TKVKVVKNKMAPPFKEAIFQILYGKGTNQLGELVDLAVQQDIVQKAGAWYSYQGNKIGQG 300
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDED 342
K ++ EN + EE+ +RE+L+ + DE+
Sbjct: 301 KNNVIRYFEENTQIAEEIERNIREQLLTTGTNGAVQIEDEE 341
>gi|167037603|ref|YP_001665181.1| recombinase A [Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|167040264|ref|YP_001663249.1| recombinase A [Thermoanaerobacter sp. X514]
gi|256750811|ref|ZP_05491696.1| recA protein [Thermoanaerobacter ethanolicus CCSD1]
gi|300914348|ref|ZP_07131664.1| recA protein [Thermoanaerobacter sp. X561]
gi|307724416|ref|YP_003904167.1| recA protein [Thermoanaerobacter sp. X513]
gi|320116018|ref|YP_004186177.1| recA protein [Thermoanaerobacter brockii subsp. finnii Ako-1]
gi|166854504|gb|ABY92913.1| recA protein [Thermoanaerobacter sp. X514]
gi|166856437|gb|ABY94845.1| recA protein [Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|256750394|gb|EEU63413.1| recA protein [Thermoanaerobacter ethanolicus CCSD1]
gi|300889283|gb|EFK84429.1| recA protein [Thermoanaerobacter sp. X561]
gi|307581477|gb|ADN54876.1| recA protein [Thermoanaerobacter sp. X513]
gi|319929109|gb|ADV79794.1| recA protein [Thermoanaerobacter brockii subsp. finnii Ako-1]
Length = 341
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/328 (55%), Positives = 248/328 (75%), Gaps = 4/328 (1%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
M +K AL+ A+ QI FGKGSIM LG + +V V+ TGS LDIALG GG+P+GR+
Sbjct: 1 MIEKQKALEMAISQIERQFGKGSIMRLGDTAK-LNVEVIPTGSLELDIALGVGGVPRGRI 59
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+EI+GPE+SGKTTLALH+IAEAQ+ GG FIDAEHALDP A+ +GV E+LL+AQPD
Sbjct: 60 IEIFGPESSGKTTLALHMIAEAQKMGGTGAFIDAEHALDPVYAKNLGVNIEDLLVAQPDT 119
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + + L+RSG+VD++V+DSVAALVPK E+DGEMGD+H+ +QARLMSQALRKL+
Sbjct: 120 GEQALEIAEALVRSGAVDIIVIDSVAALVPKAEIDGEMGDSHVGLQARLMSQALRKLAGV 179
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
S S+TI++FINQ+R K+ FG P E T GG ALKFYA++RL+++++ +K+G E IG
Sbjct: 180 TSKSKTIVVFINQLREKVGVL-FGNP-ETTPGGRALKFYATIRLDVRKVDAIKQGNEIIG 237
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYND-RNF 299
++ VK+VKNK+APPFK A+F++ +G+GISRE I+D+ K+GA ++Y D R
Sbjct: 238 NRTRVKVVKNKIAPPFKQAEFDIMYGEGISREGSILDIGTSIDIIEKSGAWYSYGDIRLG 297
Query: 300 RGKEAFKQFLVENESVREELVIKLREKL 327
+G+E KQFL EN+ + +E+ K+RE
Sbjct: 298 QGRENAKQFLKENKEIADEIERKIRENF 325
>gi|297243442|ref|ZP_06927375.1| RecA/RadA DNA recombinase [Gardnerella vaginalis AMD]
gi|296888689|gb|EFH27428.1| RecA/RadA DNA recombinase [Gardnerella vaginalis AMD]
Length = 379
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 185/342 (54%), Positives = 252/342 (73%), Gaps = 7/342 (2%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
++ AL+ AL + +GKGS M LG + V V+ TGS ALD ALG GG+P+GR+VE
Sbjct: 22 RRQAALETALANVERQYGKGSAMRLGDRPM-QDVEVIPTGSLALDTALGIGGVPRGRIVE 80
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
+YGPE+SGKTTLALH++A AQ+ GG FIDAEHALDP A +GV T+ L+++QPD GE
Sbjct: 81 VYGPESSGKTTLALHIVANAQKNGGVAAFIDAEHALDPVYARKLGVDTDALIVSQPDNGE 140
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D LIRSG++DV+VVDSVAALVPK E+DG+MGD+H+ +QARLMSQALRK++ +LS
Sbjct: 141 QALEIADMLIRSGALDVIVVDSVAALVPKAEIDGDMGDSHVGLQARLMSQALRKMTGALS 200
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ T IFINQ+R K+ F FG P E T GG ALKFYASVR++I+R+ +K+GEE +G++
Sbjct: 201 QAGTTAIFINQLREKIGVF-FGNP-ETTTGGKALKFYASVRMDIRRVSTIKEGEEAVGNR 258
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VKIVKNK+APPFKTA+F++ +G+GIS E +ID+ L+ + K+G+ FTY +G
Sbjct: 259 TKVKIVKNKMAPPFKTAEFDVLYGEGISTEGSVIDMGLQAEVIKKSGSWFTYEGEQLGQG 318
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDS 343
+E ++FL +N ++ EE+ K++ L + H E Q A EDS
Sbjct: 319 RENVRKFLKDNPAITEEISEKVKASLGLMHPEDQFA---EDS 357
>gi|326389417|ref|ZP_08210984.1| recA protein [Thermoanaerobacter ethanolicus JW 200]
gi|345017684|ref|YP_004820037.1| protein recA [Thermoanaerobacter wiegelii Rt8.B1]
gi|392940973|ref|ZP_10306617.1| protein RecA [Thermoanaerobacter siderophilus SR4]
gi|325994422|gb|EGD52847.1| recA protein [Thermoanaerobacter ethanolicus JW 200]
gi|344033027|gb|AEM78753.1| Protein recA [Thermoanaerobacter wiegelii Rt8.B1]
gi|392292723|gb|EIW01167.1| protein RecA [Thermoanaerobacter siderophilus SR4]
Length = 341
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/328 (55%), Positives = 248/328 (75%), Gaps = 4/328 (1%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
M +K AL+ A+ QI FGKGSIM LG + +V V+ TGS LDIALG GG+P+GR+
Sbjct: 1 MIEKQKALEMAISQIERQFGKGSIMRLGDTAK-LNVEVIPTGSLELDIALGVGGVPRGRI 59
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+EI+GPE+SGKTTLALH+IAEAQ+ GG FIDAEHALDP A+ +GV E+LL+AQPD
Sbjct: 60 IEIFGPESSGKTTLALHMIAEAQKMGGTGAFIDAEHALDPVYAKNLGVNIEDLLVAQPDT 119
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + + L+RSG+VD++V+DSVAALVPK E+DGEMGD+H+ +QARLMSQALRKL+
Sbjct: 120 GEQALEIAEALVRSGAVDIIVIDSVAALVPKAEIDGEMGDSHVGLQARLMSQALRKLAGV 179
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
S S+TI++FINQ+R K+ FG P E T GG ALKFYA++RL+++++ +K+G E IG
Sbjct: 180 TSKSKTIVVFINQLREKVGVM-FGNP-ETTPGGRALKFYATIRLDVRKVDAIKQGNEIIG 237
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYND-RNF 299
++ VK+VKNK+APPFK A+F++ +G+GISRE I+D+ K+GA ++Y D R
Sbjct: 238 NRTRVKVVKNKIAPPFKQAEFDIMYGEGISREGSILDIGTSIDIIEKSGAWYSYGDIRLG 297
Query: 300 RGKEAFKQFLVENESVREELVIKLREKL 327
+G+E KQFL EN+ + +E+ K+RE
Sbjct: 298 QGRENAKQFLKENKEIADEIERKIRENF 325
>gi|415727111|ref|ZP_11471339.1| recombinase A [Gardnerella vaginalis 00703Dmash]
gi|388062840|gb|EIK85445.1| recombinase A [Gardnerella vaginalis 00703Dmash]
Length = 380
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 185/342 (54%), Positives = 251/342 (73%), Gaps = 7/342 (2%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
++ AL+ AL + +GKGS M LG + V V+ TGS ALD ALG GG+P+GR+VE
Sbjct: 23 RRQAALETALANVERQYGKGSAMRLGDRPM-QDVEVIPTGSIALDTALGIGGVPRGRIVE 81
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
+YGPE+SGKTTLALH++A AQ+ GG FIDAEHALDP A +GV T+ L+++QPD GE
Sbjct: 82 VYGPESSGKTTLALHIVANAQKNGGVAAFIDAEHALDPVYARKLGVDTDALIVSQPDNGE 141
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D LIRSG++DV+VVDSVAALVPK E+DG+MGD+H+ +QARLMSQALRK++ +LS
Sbjct: 142 QALEIADMLIRSGALDVIVVDSVAALVPKAEIDGDMGDSHVGLQARLMSQALRKMTGALS 201
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ T IFINQ+R K+ F FG P E T GG ALKFYASVR++I+R+ +K+GEE IG++
Sbjct: 202 QAGTTAIFINQLREKIGVF-FGNP-ETTTGGKALKFYASVRMDIRRVSTIKEGEEAIGNR 259
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VKIVKNK+APPFKTA+F++ +G+GIS E +ID+ L+ K+G+ FTY +G
Sbjct: 260 TKVKIVKNKMAPPFKTAEFDVLYGEGISTEGSVIDMGLQADVIKKSGSWFTYEGEQLGQG 319
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDS 343
+E ++FL +N ++ EE+ K++ L + H + Q A EDS
Sbjct: 320 RENVRKFLKDNPAITEEISEKIKAALGLMHPDDQFA---EDS 358
>gi|109254800|emb|CAK22262.1| recombinase A [Pseudochrobactrum kiredjianiae]
Length = 299
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 178/299 (59%), Positives = 233/299 (77%), Gaps = 3/299 (1%)
Query: 11 ALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASG 70
AL QI SFGKGSIM LG++ + VSTGS +LDIALG GGLPKGR+VEIYGPE+SG
Sbjct: 3 ALSQIERSFGKGSIMRLGQNDKVVEIETVSTGSLSLDIALGVGGLPKGRIVEIYGPESSG 62
Query: 71 KTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSLVDT 130
KTT+ALH IAEAQ++GG C F+DAEHALDP A +GV ENLL++QPD GEQAL + DT
Sbjct: 63 KTTMALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQALEITDT 122
Query: 131 LIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIF 190
L+RSG++DV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S S T++IF
Sbjct: 123 LVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISKSNTMVIF 182
Query: 191 INQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVKIVKN 250
INQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+ +E +G+Q +K+VKN
Sbjct: 183 INQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAIKERDEVVGNQTRIKVVKN 240
Query: 251 KLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGKEAFKQF 308
KLAPPFK +F++ +G+G+S+ E++DL +K K+G+ F+YN + +G++ K F
Sbjct: 241 KLAPPFKQVEFDIMYGQGVSKTGELVDLGVKAGIVEKSGSWFSYNSQRLGQGRDNAKNF 299
>gi|343927009|ref|ZP_08766497.1| protein RecA [Gordonia alkanivorans NBRC 16433]
gi|343763067|dbj|GAA13423.1| protein RecA [Gordonia alkanivorans NBRC 16433]
Length = 347
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 185/327 (56%), Positives = 249/327 (76%), Gaps = 4/327 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
++ AL AL QI +FGKGS+M LG T + + V+ TGS ALD+ALG GGLP+GRVVEI
Sbjct: 8 REKALDLALAQIDKNFGKGSVMRLGEE-TRQPIEVIPTGSIALDVALGIGGLPRGRVVEI 66
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ALH +A AQ QGG FIDAEHALDP A +GV T+ LL++QPD GEQ
Sbjct: 67 YGPESSGKTTVALHAVANAQAQGGIAAFIDAEHALDPDYAAKLGVDTDALLVSQPDTGEQ 126
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D LIRSG++D++V+DSVAALVPK E++GEMGD+H+ +QARLMSQALRK++ +LS
Sbjct: 127 ALEIADMLIRSGALDILVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKMTGALSQ 186
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+T IFINQ+R K+ FG P E T GG ALKFY+SVRL+++RI +K G + +G++
Sbjct: 187 SKTTAIFINQLREKIGVM-FGTP-ETTTGGKALKFYSSVRLDVRRIETLKDGTDAVGNRT 244
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRGK 302
VK+VKNK+APPFK A+F++ +G GIS+E +ID+ + F K+G+ FTY D+ +GK
Sbjct: 245 RVKVVKNKVAPPFKQAEFDILYGHGISKEGSLIDMGVAEGFIRKSGSWFTYEGDQLGQGK 304
Query: 303 EAFKQFLVENESVREELVIKLREKLVV 329
E ++FL+EN +R+E+ K++EKL V
Sbjct: 305 ENARKFLLENLDIRDEIEKKIKEKLGV 331
>gi|420374718|ref|ZP_14874666.1| protein RecA [Shigella flexneri 1235-66]
gi|391315939|gb|EIQ73439.1| protein RecA [Shigella flexneri 1235-66]
Length = 354
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/349 (55%), Positives = 249/349 (71%), Gaps = 5/349 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV+VVDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+G+ +GS+
Sbjct: 185 QSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKEGDNVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +K K KAGA ++YN +G
Sbjct: 243 TRVKVVKNKIAAPFKQAEFQILYGEGINFYGELVDLGVKEKLIEKAGAWYSYNGEKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETVST 350
K +L EN + +E+ KLRE L++++++ + +DS E+ T
Sbjct: 303 KANATNWLKENPAAAKEIEKKLRE-LLLNNQDSTPDFSVDDSGEDVAET 350
>gi|338975244|ref|ZP_08630599.1| RecA protein [Bradyrhizobiaceae bacterium SG-6C]
gi|414167541|ref|ZP_11423769.1| protein recA [Afipia clevelandensis ATCC 49720]
gi|338231843|gb|EGP06978.1| RecA protein [Bradyrhizobiaceae bacterium SG-6C]
gi|410889873|gb|EKS37674.1| protein recA [Afipia clevelandensis ATCC 49720]
Length = 362
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/323 (56%), Positives = 241/323 (74%), Gaps = 3/323 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGS+M LG++ V VS+GS LDIALG GGLPKGRVVEI
Sbjct: 16 KTKALSAALSQIERQFGKGSVMKLGKNDRSMEVEAVSSGSLGLDIALGIGGLPKGRVVEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH +AEAQ++GG C FIDAEHALDP A +GV + LL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGVNVDELLISQPDHGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV++VDSVAALVP+ EL+GEMGD+ +QARLMSQALRKL+ S++
Sbjct: 136 ALEIADTLVRSGAVDVLIVDSVAALVPRAELEGEMGDSLPGLQARLMSQALRKLTASINK 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ +G P E T GGNALKFYASVRL+I+RIG +K+ +E +G+
Sbjct: 196 SHTMVIFINQIRMKIGVM-YGSP-ETTTGGNALKFYASVRLDIRRIGQIKERDEVVGNTT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G+G+S+ EI+DL +K K+GA F+Y+ + +G+
Sbjct: 254 RVKVVKNKLAPPFKQVEFDIMYGEGVSKMGEILDLGVKAGLVEKSGAWFSYDSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLRE 325
E K FL N + ++ +R+
Sbjct: 314 ENAKAFLKANPEMTAKIEASIRQ 336
>gi|283783473|ref|YP_003374227.1| recombinase A [Gardnerella vaginalis 409-05]
gi|298252554|ref|ZP_06976348.1| RecA/RadA DNA recombinase [Gardnerella vaginalis 5-1]
gi|283442058|gb|ADB14524.1| RecA protein [Gardnerella vaginalis 409-05]
gi|297532918|gb|EFH71802.1| RecA/RadA DNA recombinase [Gardnerella vaginalis 5-1]
Length = 379
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 185/342 (54%), Positives = 253/342 (73%), Gaps = 7/342 (2%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
++ AL+ AL + +GKGS M LG + V V+ TGS ALD ALG GG+P+GR+VE
Sbjct: 22 RRQAALETALANVERQYGKGSAMRLGDRPM-QDVEVIPTGSLALDTALGIGGVPRGRIVE 80
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
+YGPE+SGKTTLALH++A AQ+ GG FIDAEHALDP A +GV T+ L+++QPD GE
Sbjct: 81 VYGPESSGKTTLALHIVANAQKNGGVAAFIDAEHALDPVYARKLGVDTDALIVSQPDNGE 140
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D LIRSG++DV+VVDSVAALVPK E+DG+MGD+H+ +QARLMSQALRK++ +LS
Sbjct: 141 QALEIADMLIRSGALDVIVVDSVAALVPKAEIDGDMGDSHVGLQARLMSQALRKMTGALS 200
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ T IFINQ+R K+ F FG P E T GG ALKFYASVR++I+R+ +K+GEE +G++
Sbjct: 201 QAGTTAIFINQLREKIGVF-FGNP-ETTTGGKALKFYASVRMDIRRVSTIKEGEEAVGNR 258
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VKIVKNK+APPFKTA+F++ +G+GIS E +ID+ L+ + K+G+ FTY+ +G
Sbjct: 259 TKVKIVKNKMAPPFKTAEFDVLYGEGISTEGSVIDMGLQAEVIKKSGSWFTYDGEQLGQG 318
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDS 343
+E ++FL +N ++ EE+ K++ L + H E Q A EDS
Sbjct: 319 RENVRKFLKDNPAITEEISEKVKALLGLMHTEDQFA---EDS 357
>gi|186475208|ref|YP_001856678.1| recombinase A [Burkholderia phymatum STM815]
gi|184191667|gb|ACC69632.1| recA protein [Burkholderia phymatum STM815]
Length = 358
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 185/330 (56%), Positives = 244/330 (73%), Gaps = 4/330 (1%)
Query: 14 QITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASGKTT 73
QI FGKGS+M LG+ + VVSTGS LDIALG GGLP+GRVVEIYGPE+SGKTT
Sbjct: 25 QIEKQFGKGSVMRLGQGEAVEDIQVVSTGSLGLDIALGVGGLPRGRVVEIYGPESSGKTT 84
Query: 74 LALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSLVDTLIR 133
L L V+AE Q+ GG FIDAEHALD A+ +GV +LL++QPD GEQAL + D L+R
Sbjct: 85 LTLQVVAEMQKLGGTAAFIDAEHALDIQYAQKLGVNVSDLLVSQPDTGEQALEIADALVR 144
Query: 134 SGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFINQ 193
SGS+D++V+DSVAALVPK E++GEMGD+ +QARLMSQALRKL+ ++ + ++IFINQ
Sbjct: 145 SGSIDMIVIDSVAALVPKAEIEGEMGDSLPGLQARLMSQALRKLTGTIKRTNCLVIFINQ 204
Query: 194 VRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVKIVKNKLA 253
+R K+ FG P E T GGNALKFYASVRL+I+RIG +KK +E IG++ VK+VKNK++
Sbjct: 205 IRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGSIKKNDEVIGNETRVKVVKNKVS 262
Query: 254 PPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGKEAFKQFLVEN 312
PPF+ A F++ +G+GISR+ EIIDL ++ K KAGA ++YN +R +GK+ ++FL EN
Sbjct: 263 PPFREAIFDILYGEGISRQGEIIDLGVQAKIVDKAGAWYSYNGERIGQGKDNAREFLREN 322
Query: 313 ESVREELVIKLREKLVVDHKEPQTAVTDED 342
+ E+ ++RE L V+ P AV D D
Sbjct: 323 ADIAREIENRIRESLGVNAM-PANAVVDAD 351
>gi|132225|sp|P26344.1|RECA_ERWCA RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|6006452|emb|CAB56783.1| recA [Pectobacterium carotovorum]
Length = 342
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 190/339 (56%), Positives = 245/339 (72%), Gaps = 5/339 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + +V +STGS +LD+ALG GGLP+GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MNVETISTGSLSLDVALGAGGLPRGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+ GKTTL L VIA AQR+G C FIDAEHALDP A+ +GV +NLL +QPD GE
Sbjct: 65 IYGPESYGKTTLTLQVIAAAQREGKICAFIDAEHALDPIYAQKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV+VVDSVAAL PK E++GE+GD+H+ + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALSRSGAVDVIVVDSVAALTPKAEIEGEIGDSHVGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK G+E +GS+
Sbjct: 185 NSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGSVKNGDEVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK+VKNK+A PFK A+F++ +G+GI+ E+IDL +KHK KAGA ++YN +G
Sbjct: 243 TRVKVVKNKIAAPFKQAEFQIMYGEGINTFGELIDLGVKHKLVEKAGAWYSYNGEKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTD 340
K +L E+ + EL KLRE ++++H T+ D
Sbjct: 303 KANATTYLKEHPEMYNELNTKLRE-MLLNHAGEFTSARD 340
>gi|317125294|ref|YP_004099406.1| recA protein [Intrasporangium calvum DSM 43043]
gi|315589382|gb|ADU48679.1| recA protein [Intrasporangium calvum DSM 43043]
Length = 347
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 185/327 (56%), Positives = 246/327 (75%), Gaps = 4/327 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
KD AL + QI +FGKG++M LG V + V+ TGS ALD+ALG GGLP+GRVVEI
Sbjct: 7 KDKALSSVMGQIEKNFGKGAVMRLGDDVRA-PIEVIPTGSIALDVALGIGGLPRGRVVEI 65
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ALH +A AQ+ GG FIDAEHALDP A+ +GV T+ LL++QPD GEQ
Sbjct: 66 YGPESSGKTTVALHAVANAQKAGGIAAFIDAEHALDPDYAQRLGVDTDALLVSQPDTGEQ 125
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D LIRSG++D++V+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRKL+ +L+
Sbjct: 126 ALEIADMLIRSGAIDIIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLTGALNS 185
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
+ T IFINQ+R K+ FG P E T GG ALKFYASVRL+++RI +K G E +G++
Sbjct: 186 TGTTAIFINQLREKIGVM-FGSP-ETTTGGKALKFYASVRLDVRRIETLKDGTEPVGNRT 243
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRGK 302
VK+VKNK+APPFK A+F++ +G GISRE IID+ ++H F KAGA +TY D+ +GK
Sbjct: 244 RVKVVKNKVAPPFKQAEFDILYGLGISREGGIIDMGVEHGFVRKAGAWYTYEGDQLGQGK 303
Query: 303 EAFKQFLVENESVREELVIKLREKLVV 329
E + FL +N + +E+ K++EKL V
Sbjct: 304 ENARNFLRDNPDLADEIEKKVKEKLGV 330
>gi|311278353|ref|YP_003940584.1| recA protein [Enterobacter cloacae SCF1]
gi|308747548|gb|ADO47300.1| recA protein [Enterobacter cloacae SCF1]
Length = 352
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 194/347 (55%), Positives = 250/347 (72%), Gaps = 6/347 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYARKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV+VVDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+GE +GS+
Sbjct: 185 QSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKEGENVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +K K KAGA ++YN +G
Sbjct: 243 TRVKVVKNKIAAPFKQAEFQILYGEGINFFGELVDLGVKEKLIEKAGAWYSYNGEKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVT-DEDSTEET 347
K +L EN + +E+ K+RE L++++++P A T D++ ET
Sbjct: 303 KANAIAWLKENPAAAKEIEKKVRE-LLLNNQDPTPAFTVDDNDVAET 348
>gi|237809470|ref|YP_002893910.1| recombinase A [Tolumonas auensis DSM 9187]
gi|259563347|sp|C4LBQ0.1|RECA_TOLAT RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|237501731|gb|ACQ94324.1| recA protein [Tolumonas auensis DSM 9187]
Length = 360
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 187/334 (55%), Positives = 248/334 (74%), Gaps = 5/334 (1%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVV 61
S K+ AL AL QI FGKGSIM LG + + + + TGS +LDIALG GGLP GR+V
Sbjct: 3 SNKEKALAAALGQIEKQFGKGSIMRLGDTQS-LDIDSIPTGSLSLDIALGIGGLPMGRIV 61
Query: 62 EIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCG 121
EI+GPE+SGKTTL L VIA+AQ+ G C FIDAEHALDP A +GVK ++LL++QPD G
Sbjct: 62 EIFGPESSGKTTLTLEVIAQAQKAGKTCAFIDAEHALDPIYAGKLGVKVDDLLVSQPDTG 121
Query: 122 EQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSL 181
EQAL + D L+RSG+VDV+++DSVAAL PK E++G+MGD+H+ +QARLMSQALRKL+ ++
Sbjct: 122 EQALEICDMLVRSGAVDVIIIDSVAALTPKAEIEGDMGDSHVGLQARLMSQALRKLTGNI 181
Query: 182 SLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGS 241
+ + IFINQ+R K+ FG P E T GGNALKFYASVRL+I+R G +K GEE +G+
Sbjct: 182 KNANCLCIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRTGAIKDGEEIVGN 239
Query: 242 QIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFR 300
+ VK+VKNK+APPFK A F++ +G+GIS+ESE+IDL +K K K+GA + Y D+ +
Sbjct: 240 ETRVKVVKNKVAPPFKQADFQILYGEGISKESELIDLGVKCKLIDKSGAWYAYKGDKIGQ 299
Query: 301 GKEAFKQFLVENESVREELVIKLREKLVVDHKEP 334
GK ++L EN + EE+ +KLRE L++ H P
Sbjct: 300 GKANAMKYLKENTAAAEEIELKLRE-LLLSHNPP 332
>gi|395793295|ref|ZP_10472700.1| protein recA [Bartonella vinsonii subsp. arupensis Pm136co]
gi|395431609|gb|EJF97627.1| protein recA [Bartonella vinsonii subsp. arupensis Pm136co]
Length = 347
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 187/321 (58%), Positives = 237/321 (73%), Gaps = 3/321 (0%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL AL QI SFGKGSIM LG+ + + TGS +LDIALG GGLPKGR+VEIYGP
Sbjct: 6 ALNAALSQIERSFGKGSIMRLGQKEQVVEIETIPTGSLSLDIALGVGGLPKGRIVEIYGP 65
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTTLALH IAEAQ+ GG C FIDAEHALDP A +GV ENL ++QPD GEQAL
Sbjct: 66 ESSGKTTLALHAIAEAQKIGGICAFIDAEHALDPIYARKLGVDLENLFISQPDTGEQALE 125
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ +TL+RSG+VDV+VVDSVAAL P+ E+DGEMGDA +QARLMS+ALRKL+ ++ S
Sbjct: 126 ITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDALPGLQARLMSKALRKLTAAIFRSNC 185
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K + +G+Q VK
Sbjct: 186 MVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKDRDAIVGNQTRVK 243
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGKEAF 305
+VKNKLAPPFK +F++ +G+GIS+ E+IDL +K K+GA F+YN + +G+E
Sbjct: 244 VVKNKLAPPFKQVEFDIIYGEGISKVGELIDLGVKVGVVEKSGAWFSYNSQRLGQGRENA 303
Query: 306 KQFLVENESVREELVIKLREK 326
KQFL E+ + E+ LR+
Sbjct: 304 KQFLREHAEIATEIETALRQN 324
>gi|423713065|ref|ZP_17687325.1| protein recA [Bartonella vinsonii subsp. arupensis OK-94-513]
gi|395424691|gb|EJF90871.1| protein recA [Bartonella vinsonii subsp. arupensis OK-94-513]
Length = 347
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 187/321 (58%), Positives = 237/321 (73%), Gaps = 3/321 (0%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL AL QI SFGKGSIM LG+ + + TGS +LDIALG GGLPKGR+VEIYGP
Sbjct: 6 ALDAALSQIERSFGKGSIMRLGQKEQVVEIETIPTGSLSLDIALGVGGLPKGRIVEIYGP 65
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTTLALH IAEAQ+ GG C FIDAEHALDP A +GV ENL ++QPD GEQAL
Sbjct: 66 ESSGKTTLALHAIAEAQKIGGICAFIDAEHALDPIYARKLGVDLENLFISQPDTGEQALE 125
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ +TL+RSG+VDV+VVDSVAAL P+ E+DGEMGDA +QARLMS+ALRKL+ ++ S
Sbjct: 126 ITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDALPGLQARLMSKALRKLTAAIFRSNC 185
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K + +G+Q VK
Sbjct: 186 MVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKDRDAIVGNQTRVK 243
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGKEAF 305
+VKNKLAPPFK +F++ +G+GIS+ E+IDL +K K+GA F+YN + +G+E
Sbjct: 244 VVKNKLAPPFKQVEFDIIYGEGISKVGELIDLGVKVGIVEKSGAWFSYNSQRLGQGRENA 303
Query: 306 KQFLVENESVREELVIKLREK 326
KQFL E+ + E+ LR+
Sbjct: 304 KQFLREHAEIATEIETALRQN 324
>gi|109453454|gb|ABG34207.1| RecA [Salmonella enterica subsp. diarizonae]
Length = 353
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 193/347 (55%), Positives = 245/347 (70%), Gaps = 5/347 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV+VVDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+G+ +GS+
Sbjct: 185 QSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKEGDNVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +K K KAGA ++YN +G
Sbjct: 243 TRVKVVKNKIAAPFKQAEFQILYGEGINFYGELVDLGVKEKLIEKAGAWYSYNGEKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKE-PQTAVTDEDSTEET 347
K +L EN + +E+ K+RE L+ + P AV D + ET
Sbjct: 303 KANATTWLKENPATAKEIEKKVRELLLSNQDSTPDFAVDDSEGVAET 349
>gi|443623641|ref|ZP_21108138.1| putative protein RecA [Streptomyces viridochromogenes Tue57]
gi|443342884|gb|ELS57029.1| putative protein RecA [Streptomyces viridochromogenes Tue57]
Length = 377
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 189/356 (53%), Positives = 259/356 (72%), Gaps = 8/356 (2%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLG-RSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
+ ++ AL AL QI FGKG++M +G RS P + V+STGS ALD+ALG GGLP+GRV
Sbjct: 7 TDREKALDAALAQIERQFGKGAVMRMGERSKEP--IEVISTGSTALDVALGVGGLPRGRV 64
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
VEIYGPE+SGKTTL LH +A AQ+ GG F+DAEHALDP A+ +GV +NL+L+QPD
Sbjct: 65 VEIYGPESSGKTTLTLHAVANAQKAGGQVAFVDAEHALDPEYAKKLGVDIDNLILSQPDN 124
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL +VD L+RSG++D++V+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ +
Sbjct: 125 GEQALEIVDMLVRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITSA 184
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
L+ S+T IFINQ+R K+ FG P E T GG ALKFYASVR++I+RI +K G E +G
Sbjct: 185 LNQSKTTAIFINQLREKIGVM-FGSP-ETTTGGRALKFYASVRIDIRRIETLKDGTEAVG 242
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNF 299
++ K+VKNK+APPFK A+F++ +G+GISRE +ID+ ++H F KAGA +TY D+
Sbjct: 243 NRTRCKVVKNKVAPPFKQAEFDILYGQGISREGGLIDMGVEHGFVRKAGAWYTYEGDQLG 302
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETVSTISPDS 355
+GKE + FL +N + E+ K++EKL V + + A E + VS D+
Sbjct: 303 QGKENARNFLKDNPDLANEIEKKIKEKLGVGVRPEEPAA--EPGADAAVSATPDDA 356
>gi|413963536|ref|ZP_11402763.1| recombinase A [Burkholderia sp. SJ98]
gi|413929368|gb|EKS68656.1| recombinase A [Burkholderia sp. SJ98]
Length = 356
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/329 (57%), Positives = 242/329 (73%), Gaps = 3/329 (0%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVV 61
++K AL AL QI FGKGSIM LG + VVSTGS LDIALG GGLP+GRVV
Sbjct: 13 AEKSKALAAALSQIEKQFGKGSIMRLGAGEAVEDIQVVSTGSLGLDIALGVGGLPRGRVV 72
Query: 62 EIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCG 121
EIYGPE+SGKTTL L VIAE Q+ GG FIDAEHALD A +GV LL++QPD G
Sbjct: 73 EIYGPESSGKTTLTLQVIAEMQKLGGTAAFIDAEHALDVQYAGKLGVNVPELLISQPDTG 132
Query: 122 EQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSL 181
EQAL + D L+RSGS+D++V+DSVAALVPK E++GEMGD+ +QARLMSQALRKL+ ++
Sbjct: 133 EQALEIADALVRSGSIDMIVIDSVAALVPKAEIEGEMGDSLPGLQARLMSQALRKLTGTI 192
Query: 182 SLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGS 241
+ ++IFINQ+R K+ FG P E T GGNALKFY+SVRL+I+RIG +KK +E IG+
Sbjct: 193 KRTNCLVIFINQIRMKIGVM-FGNP-ETTTGGNALKFYSSVRLDIRRIGSIKKNDEVIGN 250
Query: 242 QIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFR 300
+ VK+VKNK++PPF+ A F++ +G+GISR+ EIIDL ++ K KAGA ++YN DR +
Sbjct: 251 ETRVKVVKNKVSPPFREAIFDILYGEGISRQGEIIDLGVQAKLVDKAGAWYSYNGDRIGQ 310
Query: 301 GKEAFKQFLVENESVREELVIKLREKLVV 329
GK+ ++FL EN + E+ K+RE L V
Sbjct: 311 GKDNAREFLRENPDIAREIENKIRESLGV 339
>gi|355673321|ref|ZP_09058918.1| RecA protein [Clostridium citroniae WAL-17108]
gi|354814787|gb|EHE99386.1| RecA protein [Clostridium citroniae WAL-17108]
Length = 378
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 180/321 (56%), Positives = 243/321 (75%), Gaps = 3/321 (0%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL AL QI ++GKGS+M LG S ++ V TGS +LDIALG GG+PKGR++E+YGP
Sbjct: 22 ALDAALTQIEKAYGKGSVMKLGDSRANMNIETVPTGSISLDIALGLGGVPKGRIIEVYGP 81
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTT+ALH++AE Q++GG FIDAEHALDP A IGV +NL ++QPD GEQAL
Sbjct: 82 ESSGKTTVALHMVAEVQKRGGIAGFIDAEHALDPVYARNIGVDIDNLYISQPDNGEQALE 141
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ +T++RSG+VD+V+VDSVAALVPK E+DGEMGD+H+ +QARLMSQALRKL+ +S S
Sbjct: 142 ITETMVRSGAVDIVIVDSVAALVPKAEIDGEMGDSHVGLQARLMSQALRKLTAVISKSNC 201
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
I+IFINQ+R K+ FG P E T GG ALKFY+SVRL+++RI +K+G E G+++ VK
Sbjct: 202 IVIFINQLREKVGVM-FGNP-ETTTGGRALKFYSSVRLDVRRIETLKQGGEVTGNRVRVK 259
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGKEAF 305
+VKNK+APPFK A+F++ FGKGIS+E +I+DLA+K K+GA F Y +G+E
Sbjct: 260 VVKNKIAPPFKEAEFDIMFGKGISKEGDILDLAVKENIIEKSGAWFAYGGAKIGQGRENS 319
Query: 306 KQFLVENESVREELVIKLREK 326
KQ+L +N ++ E+ K+R +
Sbjct: 320 KQYLADNPAMMAEVEAKVRAR 340
>gi|34497062|ref|NP_901277.1| recombinase A [Chromobacterium violaceum ATCC 12472]
gi|60393012|sp|Q7NXL9.1|RECA_CHRVO RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|34102919|gb|AAQ59283.1| RecA protein [Chromobacterium violaceum ATCC 12472]
Length = 350
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 179/317 (56%), Positives = 241/317 (76%), Gaps = 3/317 (0%)
Query: 14 QITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASGKTT 73
QI FGKGSIM + + ++ V+STGS LD+ALG GGLP+GRVVEIYGPE+SGKTT
Sbjct: 16 QIEKQFGKGSIMRMSDNQITENLQVISTGSLTLDLALGVGGLPRGRVVEIYGPESSGKTT 75
Query: 74 LALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSLVDTLIR 133
L L +AEAQ+ GG C +IDAE+ALDP A+ +GV E+LL++QPD GEQAL + D L+R
Sbjct: 76 LCLQAVAEAQKLGGTCAYIDAENALDPVYAQKLGVNVEDLLISQPDTGEQALEICDMLVR 135
Query: 134 SGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFINQ 193
S VDV+VVDSVAALVPK E++GEMGD+H+ +QARLMSQALRKL+ ++ + T++IFINQ
Sbjct: 136 SSGVDVIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTGNIKRTNTLVIFINQ 195
Query: 194 VRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVKIVKNKLA 253
+R K+ FG P E T GGNALKFYASVRL+I+R G +KKG+E IG+ VK+VKNK++
Sbjct: 196 IRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRTGGIKKGDEVIGNDTRVKVVKNKVS 253
Query: 254 PPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGKEAFKQFLVEN 312
PPF+ A FE+ +G+GISR+ EII+L +KH F K+GA + YN + +GK+ +++L N
Sbjct: 254 PPFRQADFEILYGEGISRQGEIIELGVKHGFIDKSGAWYAYNGQKIGQGKDNTREWLKAN 313
Query: 313 ESVREELVIKLREKLVV 329
++ +E+ K+RE + V
Sbjct: 314 PAIADEIERKIREAVGV 330
>gi|39936912|ref|NP_949188.1| recombinase A [Rhodopseudomonas palustris CGA009]
gi|192292742|ref|YP_001993347.1| recombinase A [Rhodopseudomonas palustris TIE-1]
gi|39650769|emb|CAE29292.1| recombination protein recA [Rhodopseudomonas palustris CGA009]
gi|192286491|gb|ACF02872.1| recA protein [Rhodopseudomonas palustris TIE-1]
Length = 363
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 186/349 (53%), Positives = 252/349 (72%), Gaps = 8/349 (2%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGS+M LG++ + +S+GS LDIALG GGLPKGR+VEI
Sbjct: 17 KSKALSAALSQIERQFGKGSVMRLGKNDRSMDIETISSGSLGLDIALGVGGLPKGRIVEI 76
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH +AEAQ++GG C F+DAEHALDP A +GV ++LL++QPD GEQ
Sbjct: 77 YGPESSGKTTLALHCVAEAQKKGGICAFVDAEHALDPVYARKLGVNVDDLLISQPDHGEQ 136
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV++VDSVAALVP+ EL+GEMGDA +QARLMSQALRKL+ S++
Sbjct: 137 ALEIADTLVRSGAIDVLIVDSVAALVPRAELEGEMGDALPGLQARLMSQALRKLTASINK 196
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ +G P E T GGNALKFYASVRL+I+RIG +K+ +E +G+Q
Sbjct: 197 SNTMVIFINQIRMKIGVM-YGSP-ETTTGGNALKFYASVRLDIRRIGQIKERDEVVGNQT 254
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G+G+S+ EI+DL +K K+GA F+++ + +G+
Sbjct: 255 RVKVVKNKLAPPFKQVEFDIMYGEGVSKMGEILDLGVKAGIVEKSGAWFSHDSQRLGQGR 314
Query: 303 EAFKQFLVENE--SVREELVIKLREKLVVDH---KEPQTAVTDEDSTEE 346
E K FL N + + E I+ L+ + P++ E+ EE
Sbjct: 315 ENAKAFLKANPDMTAKIEAAIRQNSGLIAEQILAGSPESDADGEEPMEE 363
>gi|744163|prf||2014250A recA-like protein
Length = 377
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/330 (55%), Positives = 251/330 (76%), Gaps = 6/330 (1%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLG-RSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
+ ++ AL AL QI FGKG++M +G R+ P + V+STGS ALDIALG GGLP+GRV
Sbjct: 4 TDREKALDAALAQIERQFGKGAVMRMGDRTQEP--IEVISTGSTALDIALGVGGLPRGRV 61
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
VEIYGPE+SGKTTL LH +A AQ+ GG F+DAEHALDP A+ +GV +NL+L+QPD
Sbjct: 62 VEIYGPESSGKTTLTLHAVANAQKAGGQVAFVDAEHALDPEYAKKLGVDIDNLILSQPDN 121
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL +VD L+RSG++D++V+DSVAALVP+ E++GEMGD+H+ +QARLMSQALR ++ +
Sbjct: 122 GEQALEIVDMLVRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRNITSA 181
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
L+ S+T IFINQ+R K+ FG P E T GG ALKFYASVRL+I+RI +K G + +G
Sbjct: 182 LNQSKTTAIFINQLREKIGVM-FGSP-ETTTGGRALKFYASVRLDIRRIETLKDGTDAVG 239
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNF 299
++ VK+VKNK+APPFK A+F++ +G+GISRE +ID+ ++H F KAGA +TY D+
Sbjct: 240 NRTRVKVVKNKVAPPFKQAEFDILYGQGISREGGLIDMGVEHGFVRKAGAWYTYEGDQLG 299
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVV 329
+GKE + FL +N + +E+ K++EKL V
Sbjct: 300 QGKENARNFLKDNPDLADEIERKIKEKLGV 329
>gi|427799961|ref|ZP_18967790.1| recombinase A, partial [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm5]
gi|414063863|gb|EKT44935.1| recombinase A, partial [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm5]
Length = 351
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/347 (55%), Positives = 245/347 (70%), Gaps = 5/347 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV+VVDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+G+ +GS+
Sbjct: 185 QSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKEGDNVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +K K KAGA ++YN +G
Sbjct: 243 TRVKVVKNKIAAPFKQAEFQILYGEGINFYGELVDLGVKEKLIEKAGAWYSYNGEKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHK-EPQTAVTDEDSTEET 347
K +L EN + +E+ ++RE L+ + P AV D + ET
Sbjct: 303 KANATTWLKENPATAKEIEKRVRELLLSNQNATPDFAVDDSEGVAET 349
>gi|392382934|ref|YP_005032131.1| recombinase A (recA) [Azospirillum brasilense Sp245]
gi|356877899|emb|CCC98755.1| recombinase A (recA) [Azospirillum brasilense Sp245]
Length = 359
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/322 (56%), Positives = 239/322 (74%), Gaps = 3/322 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI +FGKGSIM LG VVSTGS LDIALG GGLP+GR++EI
Sbjct: 16 KQKALDAALAQIERAFGKGSIMKLGARENTVETEVVSTGSLGLDIALGIGGLPRGRIIEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH IA+AQ+ GG C F+DAEHALDPS A +GV + LL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALHAIAQAQKGGGTCAFVDAEHALDPSYARKLGVNVDELLISQPDAGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+VVDSVAALVP+ EL+GEMGD+H+ + ARLMSQALRKL+ S++
Sbjct: 136 ALEIADTLVRSGAVDVLVVDSVAALVPRAELEGEMGDSHVGLHARLMSQALRKLTGSIAK 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K E +G+Q
Sbjct: 196 SNCLVIFINQIRLKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAIKDRETVVGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYND-RNFRGK 302
VK+VKNK+APPF+ +F++ +G+G+S+ E++DL ++ K+GA F+Y+ R +G+
Sbjct: 254 RVKVVKNKMAPPFRVVEFDIMYGEGVSKVGELLDLGIQAGVVEKSGAWFSYDGTRIGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLR 324
E K +L N + + + K+R
Sbjct: 314 ENAKNYLRNNPATADAIEAKIR 335
>gi|342732418|ref|YP_004771257.1| recombinase A [Candidatus Arthromitus sp. SFB-mouse-Japan]
gi|384455827|ref|YP_005668422.1| recombinase A [Candidatus Arthromitus sp. SFB-mouse-Yit]
gi|417964690|ref|ZP_12606377.1| Protein recA [Candidatus Arthromitus sp. SFB-4]
gi|417969040|ref|ZP_12610005.1| Protein recA [Candidatus Arthromitus sp. SFB-co]
gi|418016167|ref|ZP_12655732.1| recombination protein A [Candidatus Arthromitus sp. SFB-mouse-NYU]
gi|418372685|ref|ZP_12964777.1| Protein RecA [Candidatus Arthromitus sp. SFB-mouse-SU]
gi|342329873|dbj|BAK56515.1| recombinase A [Candidatus Arthromitus sp. SFB-mouse-Japan]
gi|345506502|gb|EGX28796.1| recombination protein A [Candidatus Arthromitus sp. SFB-mouse-NYU]
gi|346984170|dbj|BAK79846.1| recombinase A [Candidatus Arthromitus sp. SFB-mouse-Yit]
gi|380338611|gb|EIA27488.1| Protein recA [Candidatus Arthromitus sp. SFB-co]
gi|380340558|gb|EIA29135.1| Protein recA [Candidatus Arthromitus sp. SFB-4]
gi|380342354|gb|EIA30799.1| Protein RecA [Candidatus Arthromitus sp. SFB-mouse-SU]
Length = 357
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 180/353 (50%), Positives = 269/353 (76%), Gaps = 10/353 (2%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
A++ A+ QI +GKGSIM LG + ++ VSTG LDIALG GGLPKGR++E+YGP
Sbjct: 10 AIEMAMSQIEKQYGKGSIMKLGEQ-SALNIESVSTGCLDLDIALGIGGLPKGRIIEVYGP 68
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTT+ALHVIAEAQ++GG FIDAEHALDPS A+ +GV TENL+++QPD GEQAL
Sbjct: 69 ESSGKTTVALHVIAEAQKKGGAAAFIDAEHALDPSYAKNLGVDTENLIISQPDNGEQALE 128
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ + L+RSG++DV+V+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRKL+ ++ S+
Sbjct: 129 IAEALVRSGAIDVIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLAGHINKSKC 188
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
+ IFINQ+R K+ FG P E T GG ALKFYASVRL+++RI +K+G+E +G++ VK
Sbjct: 189 VAIFINQLREKVGVM-FGNP-ETTPGGRALKFYASVRLDVRRIDSIKQGDEIVGNRTRVK 246
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRGKEAF 305
I+KNK+APPF+ ++F++ + +GIS+E ++DLA+K K+G+ F+Y N++ +G+E
Sbjct: 247 IMKNKVAPPFRISEFDIIYNRGISKEGSLLDLAVKENIIQKSGSWFSYKNEKLGQGRENA 306
Query: 306 KQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETVSTISPDSTDE 358
KQFL+EN+S+ +E+ E+L+++ + + T ++ T++ V+ + ++ ++
Sbjct: 307 KQFLLENKSILQEI-----ERLILEKYNIEKSGTSKE-TKDDVNCLEMNTNND 353
>gi|304404324|ref|ZP_07385986.1| recA protein [Paenibacillus curdlanolyticus YK9]
gi|304347302|gb|EFM13134.1| recA protein [Paenibacillus curdlanolyticus YK9]
Length = 353
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/326 (56%), Positives = 246/326 (75%), Gaps = 4/326 (1%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
MS + AL+ AL QI FGKGSIM LG S T V VS+G+ ALDIALG GG P+GRV
Sbjct: 1 MSDRRAALEMALRQIEKQFGKGSIMKLGES-THMQVETVSSGALALDIALGIGGFPRGRV 59
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+E+YGPE+SGKTT+ALH IAE Q+ GG FIDAEHALDP A +GV + LLL+QPD
Sbjct: 60 IEVYGPESSGKTTVALHAIAEVQKMGGQAAFIDAEHALDPLYASKLGVNIDELLLSQPDT 119
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + + L+RSG+VD++VVDSVAALVPK E++G+MGD+H+ +QARLMSQALRKLS +
Sbjct: 120 GEQALEIAEALVRSGAVDIIVVDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKLSGA 179
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
+S S+TI IFINQ+R K+ FG P E T GG ALKFY+SVRL+++RI +K+G + +G
Sbjct: 180 ISKSKTIAIFINQLREKVGVM-FGNP-ETTPGGRALKFYSSVRLDVRRIESIKQGNDVVG 237
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNF 299
++ +K+VKNK+APPFK A+ ++ +G+GISRE IID+ +H+ K+GA F+YN DR
Sbjct: 238 NRTRIKVVKNKVAPPFKQAEVDIMYGEGISREGSIIDIGTEHEIVQKSGAWFSYNGDRLG 297
Query: 300 RGKEAFKQFLVENESVREELVIKLRE 325
+G+E KQFL +++ V + ++R+
Sbjct: 298 QGRENAKQFLKDHKDVAATIEQQIRQ 323
>gi|58039956|ref|YP_191920.1| recombinase A [Gluconobacter oxydans 621H]
gi|61252238|sp|P48289.2|RECA_GLUOX RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|58002370|gb|AAW61264.1| RecA protein [Gluconobacter oxydans 621H]
Length = 345
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/348 (54%), Positives = 257/348 (73%), Gaps = 14/348 (4%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPR-HVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL+ AL QI +FGKGSIM +G+ P+ V+STGS LDIALG GG+P+GR+VE
Sbjct: 3 KTKALEGALSQIERAFGKGSIMRMGQR--PKVETNVISTGSIGLDIALGIGGMPRGRIVE 60
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTLALHV+AEAQ++GG FIDAEHALDP A +GV ++LLL+QPD GE
Sbjct: 61 IYGPESSGKTTLALHVLAEAQKKGGTVAFIDAEHALDPGYARKLGVNIDDLLLSQPDAGE 120
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + DTL+RSG+VDV+VVDSVAALVP+ EL+G+MGD+H+ + ARLMSQALRKL+ ++S
Sbjct: 121 QALEIADTLVRSGAVDVLVVDSVAALVPRAELEGDMGDSHVGLHARLMSQALRKLTGTVS 180
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T++IF+NQ+R K+ FG P E T GGNALKFY+S+RL+I+RIG +K +E +G+Q
Sbjct: 181 RSNTLVIFLNQIRMKIGVM-FGNP-ETTTGGNALKFYSSIRLDIRRIGSIKDKDEVVGNQ 238
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK+VKNK+APPF+ +F++ +G+GIS+ E++DL +K K+GA F+++ + +G
Sbjct: 239 TRVKVVKNKMAPPFRQVEFDIMYGEGISKMGELLDLGVKGNIVEKSGAWFSFDSQRIGQG 298
Query: 302 KEAFKQFLVENESVREELVIKLR-------EKLVVDHKEPQTAVTDED 342
+E KQFL E+ + E+ ++R + L+ D EP T ED
Sbjct: 299 RENAKQFLREHPEMASEIERRIRAEAGVLSDALMTD-PEPDADGTPED 345
>gi|347726981|gb|AEP19849.1| multifunctional SOS repair factor [Exiguobacterium sp. EPVM]
gi|347727028|gb|AEP19872.1| multifunctional SOS repair factor [Exiguobacterium sp. 11-28]
Length = 349
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/343 (53%), Positives = 252/343 (73%), Gaps = 4/343 (1%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
MS + AL+ AL QI FGKGSIM LG + T + V V +GS ALDIALG GG P+GRV
Sbjct: 1 MSDRKQALEMALRQIEKQFGKGSIMRLGEN-TDQQVSVTPSGSIALDIALGAGGYPRGRV 59
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+E+YGPE+SGKTT+ALH IAE Q++GG F+DAEHALDP A+ +GV + LLL+QPD
Sbjct: 60 IEVYGPESSGKTTVALHAIAEVQKRGGQAAFVDAEHALDPKYAQNLGVNIDELLLSQPDT 119
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + + L+RSG+VD++VVDSVAALVPK E++GEMGD+H+ +QARLMSQALRKLS +
Sbjct: 120 GEQALEIAEALVRSGAVDILVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLSGA 179
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
+ S+TI+IFINQ+R K+ FG P E T GG ALKFY+SVRL ++R +K+G++ +G
Sbjct: 180 TNKSKTIVIFINQIREKIGIM-FGNP-ETTPGGRALKFYSSVRLEVRRAETLKQGQDMVG 237
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF- 299
++ +K+VKNK+APPFKTA+ ++ +G+GISRE E+ID+ K+GA ++YN+
Sbjct: 238 NRTKIKVVKNKIAPPFKTAEVDIMYGEGISREGELIDIGADLDIVQKSGAWYSYNEERLG 297
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDED 342
+G+E KQ++ EN SV + ++R+ ++ ++ T D D
Sbjct: 298 QGRENAKQYMKENPSVAASVEERIRDHYGLNGEKTITVEADND 340
>gi|284007756|emb|CBA73583.1| recombinase A [Arsenophonus nasoniae]
Length = 356
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/348 (56%), Positives = 247/348 (70%), Gaps = 6/348 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LD+ALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDVALGAGGLPLGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A+ +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV++VDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK GEE IGS+
Sbjct: 185 NSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGSVKNGEEVIGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK+VKNK+A PFK A+F++ +G+GI+ SE+IDL +K+K KAGA ++YN +G
Sbjct: 243 TRVKVVKNKVAAPFKQAEFQILYGEGINIYSELIDLGVKYKLIEKAGAWYSYNGEKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTD--EDSTEET 347
K +L E + EL KLR L+ E +A +D ++ EET
Sbjct: 303 KANATVYLKERPQIYTELDKKLRAMLLNHAGEFSSAASDFVTEAVEET 350
>gi|90408944|ref|ZP_01217078.1| putative RecA protein [Psychromonas sp. CNPT3]
gi|90309945|gb|EAS38096.1| putative RecA protein [Psychromonas sp. CNPT3]
Length = 351
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 194/336 (57%), Positives = 245/336 (72%), Gaps = 5/336 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
KD AL AL QI FGKGSIM LG + VSTGS LDIALG GGLP GRVVEI
Sbjct: 7 KDKALAAALGQIEKQFGKGSIMRLGDGNAMMDIEAVSTGSLGLDIALGIGGLPCGRVVEI 66
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIAEAQ++G C FIDAEHALDP A+ +GV + LL++QPD GEQ
Sbjct: 67 YGPESSGKTTLTLQVIAEAQKKGKTCAFIDAEHALDPIYAKKLGVNIDELLISQPDTGEQ 126
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D LIRSG+V VVV+DSVAAL PK E++G+MGD+HM +QARLMSQALRKL+ S+
Sbjct: 127 ALEICDMLIRSGAVGVVVIDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTGSIKQ 186
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
+ T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK G+E +G++
Sbjct: 187 TNTMVIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKNGDEIVGNET 244
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK++PPFK A+F++ +G GI+R E+IDL +K+ KAG+ ++Y +GK
Sbjct: 245 RVKVVKNKVSPPFKQAEFQILYGHGINRFGELIDLGVKNDLVEKAGSWYSYQGVKIGQGK 304
Query: 303 -EAFKQFLVENESVREELVIKLREKLVVDHKEPQTA 337
A K FL EN + EL +KLR+ L+ +E + A
Sbjct: 305 SNACKHFL-ENPKLAAELELKLRDILLPKPEEDEKA 339
>gi|417877996|ref|ZP_12522634.1| recombinase A [Acinetobacter baumannii ABNIH3]
gi|342233972|gb|EGT98668.1| recombinase A [Acinetobacter baumannii ABNIH3]
Length = 349
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/341 (53%), Positives = 243/341 (71%), Gaps = 4/341 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K ALQ AL QI FGK ++M LG + T + V VSTGS LDIALG GGLPKGR++E
Sbjct: 4 NKSKALQAALSQIEKQFGKNTVMRLGDN-TVQAVEAVSTGSLTLDIALGIGGLPKGRIIE 62
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTT+ L IA+ Q+ GG C FIDAEHALDP A +GV +NLL++QPD GE
Sbjct: 63 IYGPESSGKTTMTLQAIAQCQKSGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDNGE 122
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L+RSG++D++VVDSVAAL PK E++GEMGD+HM +QARLMSQALRK++ +
Sbjct: 123 QALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAK 182
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+G+E +GS+
Sbjct: 183 RSNCMVIFINQIRIKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGQVKEGDEIVGSE 240
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK+VKNK+APPFK A F++ +GKG ++ E++DLA++ KAGA ++Y +G
Sbjct: 241 TKVKVVKNKMAPPFKEAIFQILYGKGTNQLGELVDLAVQQDIVQKAGAWYSYQGNKIGQG 300
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDED 342
K ++ EN + EE+ +RE+L+ + DE+
Sbjct: 301 KNNVIRYFEENTQIAEEIERNIREQLLTTGTNGAVQIEDEE 341
>gi|374311000|ref|YP_005057430.1| protein recA [Granulicella mallensis MP5ACTX8]
gi|358753010|gb|AEU36400.1| Protein recA [Granulicella mallensis MP5ACTX8]
Length = 357
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/322 (56%), Positives = 247/322 (76%), Gaps = 3/322 (0%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
A++ AL Q+ FGKGS+M LG + V+STGS + D ALG GG+P+GRV+EI+GP
Sbjct: 8 AIETALSQLEKQFGKGSVMRLGAKEAIGPISVISTGSISFDAALGVGGVPRGRVIEIFGP 67
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTT+ L +IAEAQ+ GG F+DAEHALDP+ A+ +GV T+NLL++QPD GEQAL
Sbjct: 68 ESSGKTTITLQIIAEAQKNGGLAAFVDAEHALDPAYAKKLGVDTDNLLVSQPDYGEQALE 127
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+V+ L+RSG++DV+VVDSVAALVPK ELDGEMGD+HM +QARLMSQALRKL+ ++S S+T
Sbjct: 128 IVEALVRSGAIDVLVVDSVAALVPKAELDGEMGDSHMGLQARLMSQALRKLTGTVSKSRT 187
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
LIFINQVR K+ FG P E T GG ALKFY+SVR++I+R+G VK+G+ +G++ VK
Sbjct: 188 SLIFINQVREKIGVM-FGNP-ETTTGGRALKFYSSVRIDIRRVGAVKEGDVVVGNRTKVK 245
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGKEAF 305
IVKNK+A PF+ A+F++ FG+GISRE + +DLA+ H KAGA ++Y +R +G+E
Sbjct: 246 IVKNKVAAPFRDAEFDILFGEGISREGDSLDLAVLHNIVDKAGAWYSYQGERIGQGRENV 305
Query: 306 KQFLVENESVREELVIKLREKL 327
+ FL EN+ V + +LR+KL
Sbjct: 306 RGFLKENKEVFGRIDSELRKKL 327
>gi|315655225|ref|ZP_07908126.1| recombination protein A [Mobiluncus curtisii ATCC 51333]
gi|315490480|gb|EFU80104.1| recombination protein A [Mobiluncus curtisii ATCC 51333]
Length = 371
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/346 (52%), Positives = 252/346 (72%), Gaps = 4/346 (1%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
ALQ AL QI FGKGS+M LG S +V V+ TGS ALD+ALG GGLP+GR++EIYGP
Sbjct: 9 ALQTALGQIDKQFGKGSVMRLGDSAVNTNVSVIPTGSVALDVALGIGGLPRGRIIEIYGP 68
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTT+ALH +A AQ+QGG FIDAEHALDP A+ +GV +NLL++QPD GEQAL
Sbjct: 69 ESSGKTTVALHAVANAQKQGGNAAFIDAEHALDPVYAQKLGVDIDNLLVSQPDTGEQALE 128
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ D LIRSG +D++V+DSVAALVPK E++G+MGD+H+ +QARLMSQALRK++ +LS + T
Sbjct: 129 IADMLIRSGGLDIIVIDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKITGALSATGT 188
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
IFINQ+R K+ F FG P E T GG ALKFYASVR++++RI +K+ + +G++ K
Sbjct: 189 TAIFINQLREKIGVF-FGSP-ETTTGGKALKFYASVRIDVRRIETLKENGDAVGNRTRAK 246
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGKEAF 305
IVKNK+APPF+ A+F++ +G+GISRE +IDL + +K+G+ FTY + +GKE
Sbjct: 247 IVKNKMAPPFRQAEFDIMYGQGISREGGLIDLGVDSGIVTKSGSWFTYGEMQLGQGKENV 306
Query: 306 KQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETVSTI 351
++FLV+N + E+ K+ L V ++P E +T + ++ +
Sbjct: 307 RKFLVDNPELSAEIEDKILIALGV-REDPNAESQPESATSQKLAVV 351
>gi|312797180|ref|YP_004030102.1| recombinase A [Burkholderia rhizoxinica HKI 454]
gi|312168955|emb|CBW75958.1| RecA protein [Burkholderia rhizoxinica HKI 454]
Length = 376
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 187/329 (56%), Positives = 240/329 (72%), Gaps = 3/329 (0%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVV 61
++K AL AL QI FGKGSIM LG + VVSTGS LDIALG GGLP+GRVV
Sbjct: 35 AEKSKALAAALSQIEKQFGKGSIMRLGHGEAVEDIQVVSTGSLGLDIALGVGGLPRGRVV 94
Query: 62 EIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCG 121
EIYGPE+SGKTTL L VIAE Q+ GG C FIDAEHALD A +GV LL++QPD G
Sbjct: 95 EIYGPESSGKTTLTLQVIAEMQKIGGTCAFIDAEHALDVQYASKLGVNASELLISQPDTG 154
Query: 122 EQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSL 181
EQAL + D L+RSGS+D++V+DSVAALVPK E++GEMGD+ +QARLMSQALRKL+ ++
Sbjct: 155 EQALEIADALVRSGSIDMIVIDSVAALVPKAEIEGEMGDSLPGLQARLMSQALRKLTGTI 214
Query: 182 SLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGS 241
+ ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +KK +E IG+
Sbjct: 215 KRTNCLVIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGSIKKNDEVIGN 272
Query: 242 QIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-R 300
+ VK+VKNK++PPF+ A F++ +G+GISR EIIDL ++ K KAGA ++YN +
Sbjct: 273 ETRVKVVKNKVSPPFREAIFDILYGEGISRHGEIIDLGVQAKIVEKAGAWYSYNGEKIGQ 332
Query: 301 GKEAFKQFLVENESVREELVIKLREKLVV 329
GK+ ++FL EN + E+ ++RE L V
Sbjct: 333 GKDNAREFLRENPDLAREIENRVRESLGV 361
>gi|258541148|ref|YP_003186581.1| DNA recombinase RecA [Acetobacter pasteurianus IFO 3283-01]
gi|384041069|ref|YP_005479813.1| DNA recombinase RecA [Acetobacter pasteurianus IFO 3283-12]
gi|384049584|ref|YP_005476647.1| DNA recombinase RecA [Acetobacter pasteurianus IFO 3283-03]
gi|384052694|ref|YP_005485788.1| DNA recombinase RecA [Acetobacter pasteurianus IFO 3283-07]
gi|384055926|ref|YP_005488593.1| DNA recombinase RecA [Acetobacter pasteurianus IFO 3283-22]
gi|384058567|ref|YP_005497695.1| DNA recombinase RecA [Acetobacter pasteurianus IFO 3283-26]
gi|384061861|ref|YP_005482503.1| DNA recombinase RecA [Acetobacter pasteurianus IFO 3283-32]
gi|384117937|ref|YP_005500561.1| DNA recombinase RecA [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256632226|dbj|BAH98201.1| DNA recombinase RecA [Acetobacter pasteurianus IFO 3283-01]
gi|256635283|dbj|BAI01252.1| DNA recombinase RecA [Acetobacter pasteurianus IFO 3283-03]
gi|256638338|dbj|BAI04300.1| DNA recombinase RecA [Acetobacter pasteurianus IFO 3283-07]
gi|256641392|dbj|BAI07347.1| DNA recombinase RecA [Acetobacter pasteurianus IFO 3283-22]
gi|256644447|dbj|BAI10395.1| DNA recombinase RecA [Acetobacter pasteurianus IFO 3283-26]
gi|256647502|dbj|BAI13443.1| DNA recombinase RecA [Acetobacter pasteurianus IFO 3283-32]
gi|256650555|dbj|BAI16489.1| DNA recombinase RecA [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256653546|dbj|BAI19473.1| DNA recombinase RecA [Acetobacter pasteurianus IFO 3283-12]
Length = 398
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/321 (56%), Positives = 248/321 (77%), Gaps = 6/321 (1%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPR-HVPVVSTGSFALDIALGTGGLPKGRVVEIYG 65
AL+ AL QI +FGKGS+M LG+ P+ V+ TGS LDIALG GGLP+GRVVEIYG
Sbjct: 63 ALEGALGQIERAFGKGSVMRLGQR--PKVEADVIPTGSLGLDIALGIGGLPRGRVVEIYG 120
Query: 66 PEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQAL 125
PE+SGKTTLALH IAEAQ++GG C FIDAEHALDPS A+ +GV +NLL++QPD GEQAL
Sbjct: 121 PESSGKTTLALHAIAEAQKRGGTCAFIDAEHALDPSYAKKLGVDVDNLLISQPDTGEQAL 180
Query: 126 SLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQ 185
+ DTL+RSG++DV+VVDSVAALVP+ EL+G+MGD+H+ + ARLMSQALRKL+ +++ S
Sbjct: 181 EIADTLVRSGAIDVLVVDSVAALVPRAELEGDMGDSHVGLHARLMSQALRKLTGTVARSN 240
Query: 186 TILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAV 245
T++IF+NQ+R K+ FG P E T GGNALKFY+SVR++I+RIG +K +E G+Q V
Sbjct: 241 TLMIFLNQIRLKIGVM-FGNP-ETTTGGNALKFYSSVRMDIRRIGSIKDKDEVTGNQTRV 298
Query: 246 KIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGKEA 304
K+VKNK+APPF+ +F++ +G+GIS+ E+IDL +K K+GA F+Y+ + +G+E
Sbjct: 299 KVVKNKMAPPFRQVEFDIMYGEGISKVGELIDLGVKAGVVEKSGAWFSYDSQRIGQGREN 358
Query: 305 FKQFLVENESVREELVIKLRE 325
KQFL ++ + ++ ++RE
Sbjct: 359 AKQFLRDHPEMAADIERRVRE 379
>gi|421504009|ref|ZP_15950953.1| recombinase A [Pseudomonas mendocina DLHK]
gi|400345110|gb|EJO93476.1| recombinase A [Pseudomonas mendocina DLHK]
Length = 347
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 186/340 (54%), Positives = 245/340 (72%), Gaps = 5/340 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKG++M +G + +P +STGS LDIALG GGLPKGR+VE
Sbjct: 4 NKKRALAAALGQIEKQFGKGAVMRMGDH-ERQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIAEAQ+ G C F+DAEHALDP A +GV ++LL++QPD GE
Sbjct: 63 IYGPESSGKTTLTLSVIAEAQKNGATCAFVDAEHALDPDYAGKLGVNVDDLLVSQPDTGE 122
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L+RS ++DV++VDSVAALVPK E++GEMGD H+ +QARLMSQALRK++ ++
Sbjct: 123 QALEITDMLVRSNAIDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ ++IFINQ+R K+ FG P E T GGNALKFY+SVRL+I+R G VK+GEE +GS+
Sbjct: 183 NANCLVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYSSVRLDIRRTGAVKEGEEVVGSE 240
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VKIVKNK+APPF+ A+F++ +GKGI R EIIDL ++ K+GA ++Y +G
Sbjct: 241 TRVKIVKNKVAPPFRQAEFQILYGKGIYRNGEIIDLGVQQGLVEKSGAWYSYQGNKIGQG 300
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDE 341
K +FL +N +V E+ ++REKL+V P A DE
Sbjct: 301 KANAAKFLEDNPAVAREIEGQIREKLLVSGA-PVKASADE 339
>gi|379722824|ref|YP_005314955.1| recombinase A [Paenibacillus mucilaginosus 3016]
gi|386725599|ref|YP_006191925.1| recombinase A [Paenibacillus mucilaginosus K02]
gi|378571496|gb|AFC31806.1| RecA [Paenibacillus mucilaginosus 3016]
gi|384092724|gb|AFH64160.1| recombinase A [Paenibacillus mucilaginosus K02]
Length = 349
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/327 (55%), Positives = 245/327 (74%), Gaps = 4/327 (1%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
M+ + AL+ AL QI FGKGSIM LG S T V +S+GS ALDIALG GG P+GR+
Sbjct: 1 MADRRAALENALRQIEKQFGKGSIMKLGES-THMQVETISSGSLALDIALGIGGFPRGRI 59
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+E+YGPE+SGKTT+ALH IAE Q+ GG FIDAEHALDP A +G+ + LLL+QPD
Sbjct: 60 IEVYGPESSGKTTVALHAIAEVQKNGGTAAFIDAEHALDPLYASKLGINIDELLLSQPDT 119
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + + L+RSG+VD++V+DSVAALVPK E++GEMGD+H+ +QARLMSQALRKLS +
Sbjct: 120 GEQALEIAEALVRSGAVDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLSGA 179
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
++ S+TI IFINQ+R K+ FG P E T GG ALKFY+SVRL+++RI +K+G + +G
Sbjct: 180 INKSKTIAIFINQLREKVGVM-FGNP-ETTPGGRALKFYSSVRLDVRRIETIKQGNDMVG 237
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNF 299
++ +K+VKNK+APPFK A+ ++ +G+GISRE I+D+A + K+GA +++ NDR
Sbjct: 238 NRTRIKVVKNKVAPPFKQAEIDIMYGEGISREGSIVDIATEMDVIQKSGAWYSFNNDRLG 297
Query: 300 RGKEAFKQFLVENESVREELVIKLREK 326
+G+E KQFL EN V E + K+RE
Sbjct: 298 QGRENVKQFLKENPQVAEVIEKKIREN 324
>gi|4894746|gb|AAD32599.1|AF127333_1 RecA [Xenorhabdus nematophila]
Length = 358
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 195/350 (55%), Positives = 251/350 (71%), Gaps = 9/350 (2%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + + V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGENRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A+ +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQREGRTCAFIDAEHALDPVYAKKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV++VDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALSRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E GGNALKFYASVRL+I+R G VK G+E +GS+
Sbjct: 185 NSNTLLIFINQIRMKIGVM-FGNP-ETPPGGNALKFYASVRLDIRRTGSVKNGDEVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+ E+IDL++KHK KAGA ++YN D+ +G
Sbjct: 243 TRVKVVKNKVAAPFKQAEFQILYGEGINTLGELIDLSVKHKMVEKAGAWYSYNGDKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTD-----EDSTEE 346
K +L E+ EL KLR+ L+ + + +A +D ED+TEE
Sbjct: 303 KANATIYLKEHPETAAELNKKLRDLLLHNTGDFSSAASDYVTDYEDNTEE 352
>gi|453052269|gb|EME99755.1| recombinase A [Streptomyces mobaraensis NBRC 13819 = DSM 40847]
Length = 372
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/338 (55%), Positives = 252/338 (74%), Gaps = 7/338 (2%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLG-RSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
+ ++ AL AL QI FGKG++M LG R P + V+STGS ALD+ALG GGLP+GRV
Sbjct: 4 TDREKALDAALAQIERQFGKGAVMRLGERPNEP--IEVISTGSTALDVALGVGGLPRGRV 61
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
VEIYGPE+SGKTTL LH +A AQR GG F+DAEHALDP A +GV +NL+L+QPD
Sbjct: 62 VEIYGPESSGKTTLTLHAVANAQRAGGTVAFVDAEHALDPEYARKLGVDIDNLILSQPDN 121
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL +VD L+RSG++D++V+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ +
Sbjct: 122 GEQALEIVDMLVRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITSA 181
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
L+ S+T IFINQ+R K+ FG P E T GG ALKFYASVR++I+RI +K G E +G
Sbjct: 182 LNQSKTTAIFINQLREKIGVM-FGSP-ETTTGGRALKFYASVRIDIRRIETLKDGTEAVG 239
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNF 299
++ K+VKNK+APPFK A+F++ +G+GISRE +ID+ ++H F KAGA +TY D+
Sbjct: 240 NRTRCKVVKNKVAPPFKQAEFDILYGQGISREGGLIDMGVEHGFVRKAGAWYTYEGDQLG 299
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVDHKEPQTA 337
+GKE + FL +N + E+ K++EKL V K P+ A
Sbjct: 300 QGKENARNFLKDNPDLANEIEKKIKEKLGVGVK-PEAA 336
>gi|421653964|ref|ZP_16094295.1| RecA protein [Acinetobacter baumannii Naval-72]
gi|408511814|gb|EKK13461.1| RecA protein [Acinetobacter baumannii Naval-72]
Length = 349
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/341 (53%), Positives = 243/341 (71%), Gaps = 4/341 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K ALQ AL QI FGK ++M LG + T + V VSTGS LDIALG GGLPKGR++E
Sbjct: 4 NKSKALQAALSQIEKQFGKNTVMRLGDN-TVQAVEAVSTGSLTLDIALGIGGLPKGRIIE 62
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTT+ L IA+ Q+ GG C FIDAEHALDP A +GV +NLL++QPD GE
Sbjct: 63 IYGPESSGKTTMTLQAIAQCQKSGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDNGE 122
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L+RSG++D++VVDSVAAL PK E++GEMGD+HM +QARLMSQALRK++ +
Sbjct: 123 QALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAK 182
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+G+E +GS+
Sbjct: 183 RSNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGQVKEGDEIVGSE 240
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK+VKNK+APPFK A F++ +GKG ++ E++DLA++ KAGA ++Y +G
Sbjct: 241 TKVKVVKNKMAPPFKEAIFQILYGKGTNQLGELVDLAVQQDIVQKAGAWYSYQGNKIGQG 300
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDED 342
K ++ EN + EE+ +RE+L+ + DE+
Sbjct: 301 KNNVIRYFEENTPIAEEIERNIREQLLTTGTNGAVQIEDEE 341
>gi|404258519|ref|ZP_10961838.1| protein RecA [Gordonia namibiensis NBRC 108229]
gi|403403033|dbj|GAC00248.1| protein RecA [Gordonia namibiensis NBRC 108229]
Length = 347
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/325 (56%), Positives = 249/325 (76%), Gaps = 4/325 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
++ AL AL QI +FGKGS+M LG T + + ++ TGS ALD+ALG GGLP+GRVVEI
Sbjct: 8 REKALDLALAQIDKNFGKGSVMRLGEE-TRQPIEIIPTGSIALDVALGIGGLPRGRVVEI 66
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ALH +A AQ QGG FIDAEHALDP A +GV T+ LL++QPD GEQ
Sbjct: 67 YGPESSGKTTVALHAVANAQAQGGIAAFIDAEHALDPDYAAKLGVDTDALLVSQPDTGEQ 126
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D LIRSG++D++V+DSVAALVPK E++GEMGD+H+ +QARLMSQALRK++ +L+
Sbjct: 127 ALEIADMLIRSGALDILVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKMTSALNQ 186
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+T IFINQ+R K+ FG P E T GG ALKFY+SVRL+++RI +K G + +G++
Sbjct: 187 SKTTAIFINQLREKIGVM-FGSP-ETTTGGKALKFYSSVRLDVRRIETLKDGTDAVGNRT 244
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRGK 302
VK+VKNK+APPFK A+F++ +G+GIS+E +ID+ + F K+G+ FTY D+ +GK
Sbjct: 245 RVKVVKNKVAPPFKQAEFDILYGQGISKEGSLIDMGVAEGFIRKSGSWFTYEGDQLGQGK 304
Query: 303 EAFKQFLVENESVREELVIKLREKL 327
E ++FL+EN +R+E+ K++EKL
Sbjct: 305 ENARKFLLENVDIRDEIEKKIKEKL 329
>gi|91976208|ref|YP_568867.1| recombinase A [Rhodopseudomonas palustris BisB5]
gi|91682664|gb|ABE38966.1| RecA protein [Rhodopseudomonas palustris BisB5]
Length = 363
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/324 (56%), Positives = 242/324 (74%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGS+M LG++ + +S+GS LDIALG GGLPKGRVVEI
Sbjct: 17 KTKALTAALSQIERQFGKGSVMRLGKNDRSMDIETISSGSLGLDIALGVGGLPKGRVVEI 76
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH +AEAQ++GG C FIDAEHALDP A +GV + LL++QPD GEQ
Sbjct: 77 YGPESSGKTTLALHCVAEAQKKGGICAFIDAEHALDPVYARKLGVNVDELLISQPDHGEQ 136
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV++VDSVAALVP+ EL+GEMGDA +QARLMSQALRKL+ S++
Sbjct: 137 ALEIADTLVRSGAIDVLIVDSVAALVPRAELEGEMGDALPGLQARLMSQALRKLTASINK 196
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ +G P E T GGNALKFYASVRL+I+RIG +K+ +E +G+Q
Sbjct: 197 SNTMVIFINQIRMKIGVM-YGSP-ETTTGGNALKFYASVRLDIRRIGQIKERDEVVGNQT 254
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G+G+S+ EI+DL +K K+GA F+++ + +G+
Sbjct: 255 RVKVVKNKLAPPFKQVEFDIMYGEGVSKMGEILDLGVKAGIVDKSGAWFSHDSQRLGQGR 314
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E K FL N + ++ +R+
Sbjct: 315 ENAKAFLKANPDLTAKIEASIRQN 338
>gi|49475766|ref|YP_033807.1| recombinase A [Bartonella henselae str. Houston-1]
gi|59798263|sp|Q6G2Z3.1|RECA_BARHE RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|49238573|emb|CAF27814.1| recA protein [Bartonella henselae str. Houston-1]
Length = 347
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 187/321 (58%), Positives = 237/321 (73%), Gaps = 3/321 (0%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL AL QI SFGKGSIM LG+ + + TGS +LDIALG GGLPKGR+VEIYGP
Sbjct: 6 ALDAALSQIERSFGKGSIMRLGQKEQVVEIETIPTGSLSLDIALGVGGLPKGRIVEIYGP 65
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTTLALH IAEAQ+ GG C FIDAEHALDP A +GV ENL ++QPD GEQAL
Sbjct: 66 ESSGKTTLALHAIAEAQKNGGVCAFIDAEHALDPIYARKLGVDLENLFISQPDTGEQALE 125
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ +TL+RSG+VDV+VVDSVAAL P+ E+DGEMGDA +QARLMS+ALRKL+ S+ S
Sbjct: 126 ITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDALPGLQARLMSKALRKLTASIFRSNC 185
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K + +G+Q VK
Sbjct: 186 MVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKDRDMIVGNQTRVK 243
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGKEAF 305
+VKNKLAPPFK +F++ +G+GIS+ E+IDL +K K+G+ F+YN + +G+E
Sbjct: 244 VVKNKLAPPFKQVEFDIIYGEGISKLGELIDLGVKVGTVEKSGSWFSYNSQRLGQGRENA 303
Query: 306 KQFLVENESVREELVIKLREK 326
KQFL E+ + E+ LR+
Sbjct: 304 KQFLREHPEIATEIETALRQN 324
>gi|16761605|ref|NP_457222.1| recombinase A [Salmonella enterica subsp. enterica serovar Typhi
str. CT18]
gi|16766135|ref|NP_461750.1| recombinase A [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|29143089|ref|NP_806431.1| recombinase A [Salmonella enterica subsp. enterica serovar Typhi
str. Ty2]
gi|62181332|ref|YP_217749.1| recombinase A [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|161615727|ref|YP_001589692.1| recombinase A [Salmonella enterica subsp. enterica serovar
Paratyphi B str. SPB7]
gi|167994128|ref|ZP_02575220.1| protein RecA [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|168235857|ref|ZP_02660915.1| protein RecA [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|168245260|ref|ZP_02670192.1| protein RecA [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|168262060|ref|ZP_02684033.1| protein RecA [Salmonella enterica subsp. enterica serovar Hadar
str. RI_05P066]
gi|168464049|ref|ZP_02697966.1| protein RecA [Salmonella enterica subsp. enterica serovar Newport
str. SL317]
gi|168820488|ref|ZP_02832488.1| protein RecA [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|194446772|ref|YP_002042070.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. SL254]
gi|194451484|ref|YP_002046789.1| recombinase A [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|194736708|ref|YP_002115781.1| recombinase A [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|197250628|ref|YP_002147725.1| recombinase A [Salmonella enterica subsp. enterica serovar Agona
str. SL483]
gi|197263607|ref|ZP_03163681.1| protein RecA [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA23]
gi|198241828|ref|YP_002216800.1| recombinase A [Salmonella enterica subsp. enterica serovar Dublin
str. CT_02021853]
gi|200386699|ref|ZP_03213311.1| protein RecA [Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
gi|204928070|ref|ZP_03219270.1| protein RecA [Salmonella enterica subsp. enterica serovar Javiana
str. GA_MM04042433]
gi|205353773|ref|YP_002227574.1| recombinase A [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|207858093|ref|YP_002244744.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|213028317|ref|ZP_03342764.1| recombinase A [Salmonella enterica subsp. enterica serovar Typhi
str. 404ty]
gi|213051937|ref|ZP_03344815.1| recombinase A [Salmonella enterica subsp. enterica serovar Typhi
str. E00-7866]
gi|213426123|ref|ZP_03358873.1| recombinase A [Salmonella enterica subsp. enterica serovar Typhi
str. E02-1180]
gi|213579899|ref|ZP_03361725.1| recombinase A [Salmonella enterica subsp. enterica serovar Typhi
str. E98-0664]
gi|213648097|ref|ZP_03378150.1| recombinase A [Salmonella enterica subsp. enterica serovar Typhi
str. J185]
gi|224584607|ref|YP_002638405.1| recombinase A [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|238909595|ref|ZP_04653432.1| recombinase A [Salmonella enterica subsp. enterica serovar
Tennessee str. CDC07-0191]
gi|289824465|ref|ZP_06544041.1| recombinase A [Salmonella enterica subsp. enterica serovar Typhi
str. E98-3139]
gi|374981460|ref|ZP_09722787.1| RecA protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. TN061786]
gi|375115669|ref|ZP_09760839.1| recombinase A [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SCSA50]
gi|375120292|ref|ZP_09765459.1| recombinase A [Salmonella enterica subsp. enterica serovar Dublin
str. SD3246]
gi|375124631|ref|ZP_09769795.1| recombinase A [Salmonella enterica subsp. enterica serovar
Gallinarum str. SG9]
gi|378446186|ref|YP_005233818.1| recombinase A [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|378451567|ref|YP_005238927.1| recombinase A [Salmonella enterica subsp. enterica serovar
Typhimurium str. 14028S]
gi|378700741|ref|YP_005182698.1| recombinase A [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|378956449|ref|YP_005213936.1| recombinase A [Salmonella enterica subsp. enterica serovar
Gallinarum/pullorum str. RKS5078]
gi|378960886|ref|YP_005218372.1| hypothetical protein STBHUCCB_28700 [Salmonella enterica subsp.
enterica serovar Typhi str. P-stx-12]
gi|378985418|ref|YP_005248574.1| recombinase A [Salmonella enterica subsp. enterica serovar
Typhimurium str. T000240]
gi|378990154|ref|YP_005253318.1| recombinase A [Salmonella enterica subsp. enterica serovar
Typhimurium str. UK-1]
gi|379702081|ref|YP_005243809.1| recombinase A [Salmonella enterica subsp. enterica serovar
Typhimurium str. ST4/74]
gi|383497504|ref|YP_005398193.1| recombinase A [Salmonella enterica subsp. enterica serovar
Typhimurium str. 798]
gi|386592518|ref|YP_006088918.1| recombinase A [Salmonella enterica subsp. enterica serovar
Heidelberg str. B182]
gi|409246498|ref|YP_006887202.1| Protein recA Recombinase A [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|416425092|ref|ZP_11692127.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 315996572]
gi|416428274|ref|ZP_11693774.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-1]
gi|416438730|ref|ZP_11699709.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-3]
gi|416444999|ref|ZP_11704043.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-4]
gi|416451726|ref|ZP_11708476.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-1]
gi|416459696|ref|ZP_11714141.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-2]
gi|416471521|ref|ZP_11719241.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 531954]
gi|416475512|ref|ZP_11720659.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. NC_MB110209-0054]
gi|416488622|ref|ZP_11725835.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. OH_2009072675]
gi|416499447|ref|ZP_11730814.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. CASC_09SCPH15965]
gi|416509051|ref|ZP_11736368.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB31]
gi|416515261|ref|ZP_11738525.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. ATCC BAA710]
gi|416530104|ref|ZP_11744720.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. LQC 10]
gi|416537193|ref|ZP_11748809.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB30]
gi|416544801|ref|ZP_11753057.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 19N]
gi|416550927|ref|ZP_11756253.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 29N]
gi|416562794|ref|ZP_11762430.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 42N]
gi|416576945|ref|ZP_11769471.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 81038-01]
gi|416584963|ref|ZP_11774567.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. MD_MDA09249507]
gi|416590576|ref|ZP_11777830.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 414877]
gi|416598025|ref|ZP_11782412.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 366867]
gi|416606619|ref|ZP_11787887.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 413180]
gi|416616496|ref|ZP_11794120.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 446600]
gi|416621842|ref|ZP_11796605.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 609458-1]
gi|416627131|ref|ZP_11799002.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 556150-1]
gi|416640358|ref|ZP_11804976.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 609460]
gi|416647451|ref|ZP_11808390.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 507440-20]
gi|416656583|ref|ZP_11813269.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 556152]
gi|416667827|ref|ZP_11818507.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. MB101509-0077]
gi|416679151|ref|ZP_11822875.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. MB102109-0047]
gi|416691444|ref|ZP_11826223.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. MB110209-0055]
gi|416706279|ref|ZP_11831538.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. MB111609-0052]
gi|416712042|ref|ZP_11835753.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009083312]
gi|416718238|ref|ZP_11840346.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009085258]
gi|416726822|ref|ZP_11846867.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 315731156]
gi|416731054|ref|ZP_11848989.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2009159199]
gi|416741152|ref|ZP_11854903.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008282]
gi|416749477|ref|ZP_11859266.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008283]
gi|416753631|ref|ZP_11860935.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008284]
gi|416765268|ref|ZP_11868649.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008285]
gi|416768828|ref|ZP_11870826.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008287]
gi|418482084|ref|ZP_13051107.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 80959-06]
gi|418488213|ref|ZP_13056077.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035278]
gi|418493528|ref|ZP_13059994.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035318]
gi|418501081|ref|ZP_13067471.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035320]
gi|418505329|ref|ZP_13071675.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035321]
gi|418510562|ref|ZP_13076841.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035327]
gi|418512179|ref|ZP_13078422.1| recombinase A [Salmonella enterica subsp. enterica serovar Pomona
str. ATCC 10729]
gi|418524859|ref|ZP_13090844.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008286]
gi|418760333|ref|ZP_13316490.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 35185]
gi|418764692|ref|ZP_13320787.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 35199]
gi|418773022|ref|ZP_13329014.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 21539]
gi|418774444|ref|ZP_13330413.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 33953]
gi|418779572|ref|ZP_13335471.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 35188]
gi|418783879|ref|ZP_13339723.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 21559]
gi|418787835|ref|ZP_13343634.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19447]
gi|418793502|ref|ZP_13349231.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19449]
gi|418799222|ref|ZP_13354889.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19567]
gi|418800551|ref|ZP_13356202.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 35202]
gi|418806021|ref|ZP_13361595.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 21550]
gi|418809926|ref|ZP_13365469.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 22513]
gi|418816040|ref|ZP_13371534.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 21538]
gi|418823623|ref|ZP_13379030.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 22425]
gi|418827190|ref|ZP_13382348.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 22462]
gi|418829907|ref|ZP_13384871.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM N18486]
gi|418836848|ref|ZP_13391730.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM N1543]
gi|418841831|ref|ZP_13396646.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 21554]
gi|418847800|ref|ZP_13402541.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 37978]
gi|418852647|ref|ZP_13407346.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19593]
gi|418867302|ref|ZP_13421761.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 4176]
gi|419731892|ref|ZP_14258800.1| recombinase A [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41579]
gi|419735514|ref|ZP_14262387.1| recombinase A [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41563]
gi|419737097|ref|ZP_14263921.1| recombinase A [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41573]
gi|419741683|ref|ZP_14268361.1| recombinase A [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41566]
gi|419748190|ref|ZP_14274689.1| recombinase A [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41565]
gi|419787857|ref|ZP_14313559.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. Levine 1]
gi|419793531|ref|ZP_14319152.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. Levine 15]
gi|421360411|ref|ZP_15810687.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 622731-39]
gi|421363185|ref|ZP_15813427.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639016-6]
gi|421369508|ref|ZP_15819683.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 640631]
gi|421370149|ref|ZP_15820316.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-0424]
gi|421379110|ref|ZP_15829189.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-6]
gi|421383219|ref|ZP_15833257.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 485549-17]
gi|421385132|ref|ZP_15835155.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-22]
gi|421390083|ref|ZP_15840059.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-70]
gi|421396509|ref|ZP_15846434.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-26]
gi|421399288|ref|ZP_15849183.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-37]
gi|421405493|ref|ZP_15855323.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-46]
gi|421409814|ref|ZP_15859603.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-50]
gi|421415117|ref|ZP_15864853.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-1427]
gi|421417278|ref|ZP_15866988.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-2659]
gi|421420616|ref|ZP_15870292.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 78-1757]
gi|421428262|ref|ZP_15877873.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22510-1]
gi|421430704|ref|ZP_15880290.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 8b-1]
gi|421435868|ref|ZP_15885404.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648905 5-18]
gi|421440286|ref|ZP_15889766.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 6-18]
gi|421443656|ref|ZP_15893095.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-3079]
gi|421449127|ref|ZP_15898511.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 58-6482]
gi|421569894|ref|ZP_16015590.1| recombinase A [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00322]
gi|421575114|ref|ZP_16020728.1| recombinase A [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00325]
gi|421580455|ref|ZP_16026013.1| recombinase A [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00326]
gi|421584141|ref|ZP_16029651.1| recombinase A [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00328]
gi|421886008|ref|ZP_16317189.1| recombinase A [Salmonella enterica subsp. enterica serovar
Senftenberg str. SS209]
gi|422027039|ref|ZP_16373385.1| recombinase A [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm1]
gi|422032073|ref|ZP_16378190.1| recombinase A [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm2]
gi|427553708|ref|ZP_18928684.1| recombinase A [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm8]
gi|427571264|ref|ZP_18933401.1| recombinase A [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm9]
gi|427591972|ref|ZP_18938200.1| recombinase A [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm3]
gi|427615171|ref|ZP_18943084.1| recombinase A [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm4]
gi|427639401|ref|ZP_18947966.1| recombinase A [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm6]
gi|427657060|ref|ZP_18952715.1| recombinase A [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm10]
gi|427662371|ref|ZP_18957676.1| recombinase A [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm11]
gi|427675896|ref|ZP_18962493.1| recombinase A [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm12]
gi|436614396|ref|ZP_20514084.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22704]
gi|436768334|ref|ZP_20520782.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE30663]
gi|436799482|ref|ZP_20523768.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS44]
gi|436807663|ref|ZP_20527706.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1882]
gi|436818555|ref|ZP_20535188.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1884]
gi|436832777|ref|ZP_20537067.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1594]
gi|436852875|ref|ZP_20542900.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1566]
gi|436861335|ref|ZP_20548519.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1580]
gi|436867434|ref|ZP_20552588.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1543]
gi|436872780|ref|ZP_20555662.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1441]
gi|436880550|ref|ZP_20560309.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1810]
gi|436891403|ref|ZP_20566103.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1558]
gi|436899689|ref|ZP_20571100.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1018]
gi|436903197|ref|ZP_20573661.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1010]
gi|436914714|ref|ZP_20579561.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1729]
gi|436919416|ref|ZP_20582197.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0895]
gi|436928707|ref|ZP_20587913.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0899]
gi|436938680|ref|ZP_20593467.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1457]
gi|436945758|ref|ZP_20597586.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1747]
gi|436955222|ref|ZP_20602097.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0968]
gi|436965956|ref|ZP_20606625.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1444]
gi|436969651|ref|ZP_20608648.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1445]
gi|436985157|ref|ZP_20614742.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1559]
gi|436994085|ref|ZP_20618654.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1565]
gi|437004738|ref|ZP_20621968.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1808]
gi|437022016|ref|ZP_20628144.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1811]
gi|437027290|ref|ZP_20630179.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0956]
gi|437043198|ref|ZP_20636711.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1455]
gi|437050875|ref|ZP_20641020.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1575]
gi|437062105|ref|ZP_20647471.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1725]
gi|437067021|ref|ZP_20650083.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1745]
gi|437073752|ref|ZP_20653194.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1791]
gi|437082836|ref|ZP_20658579.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1795]
gi|437096507|ref|ZP_20664872.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 576709]
gi|437110362|ref|ZP_20667708.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 635290-58]
gi|437118779|ref|ZP_20670514.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-16]
gi|437129321|ref|ZP_20675797.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-19]
gi|437135913|ref|ZP_20679551.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-2]
gi|437145948|ref|ZP_20685737.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-9]
gi|437153134|ref|ZP_20690240.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629163]
gi|437158941|ref|ZP_20693529.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE15-1]
gi|437168817|ref|ZP_20699255.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_N202]
gi|437176047|ref|ZP_20703223.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_56-3991]
gi|437184279|ref|ZP_20708144.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_76-3618]
gi|437200659|ref|ZP_20711723.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13183-1]
gi|437264527|ref|ZP_20719803.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_81-2490]
gi|437269613|ref|ZP_20722856.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL909]
gi|437277825|ref|ZP_20727184.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL913]
gi|437302050|ref|ZP_20733384.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_69-4941]
gi|437315657|ref|ZP_20737345.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 638970-15]
gi|437327488|ref|ZP_20740430.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 17927]
gi|437341557|ref|ZP_20744680.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS4]
gi|437369097|ref|ZP_20749102.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22558]
gi|437408211|ref|ZP_20752367.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 22-17]
gi|437445559|ref|ZP_20758281.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 40-18]
gi|437463162|ref|ZP_20762844.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 1-1]
gi|437483924|ref|ZP_20769008.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 4-1]
gi|437495678|ref|ZP_20772822.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642046 4-7]
gi|437519256|ref|ZP_20778626.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648898 4-5]
gi|437526982|ref|ZP_20779990.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648899 3-17]
gi|437555799|ref|ZP_20784766.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648900 1-16]
gi|437573999|ref|ZP_20789661.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 1-17]
gi|437594207|ref|ZP_20795754.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 39-2]
gi|437605292|ref|ZP_20799471.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648902 6-8]
gi|437620335|ref|ZP_20804055.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648903 1-6]
gi|437644633|ref|ZP_20808718.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648904 3-6]
gi|437664754|ref|ZP_20814368.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 653049 13-19]
gi|437675419|ref|ZP_20816754.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 8-1]
gi|437696162|ref|ZP_20822379.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 9-7]
gi|437710954|ref|ZP_20826632.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 42-20]
gi|437721553|ref|ZP_20829077.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 16-16]
gi|437796056|ref|ZP_20837571.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 76-2651]
gi|437808260|ref|ZP_20839965.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 33944]
gi|437840983|ref|ZP_20846496.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. SARB17]
gi|437864251|ref|ZP_20848041.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 6.0562-1]
gi|438010583|ref|ZP_20854477.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-5646]
gi|438094876|ref|ZP_20861831.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 81-2625]
gi|438101499|ref|ZP_20864326.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 62-1976]
gi|438116099|ref|ZP_20870618.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 53-407]
gi|438121007|ref|ZP_20872115.1| recombinase A [Salmonella enterica subsp. enterica serovar Pullorum
str. ATCC 9120]
gi|440764319|ref|ZP_20943348.1| recombinase A [Salmonella enterica subsp. enterica serovar Agona
str. SH11G1113]
gi|440770298|ref|ZP_20949250.1| recombinase A [Salmonella enterica subsp. enterica serovar Agona
str. SH08SF124]
gi|440773000|ref|ZP_20951901.1| recombinase A [Salmonella enterica subsp. enterica serovar Agona
str. SH10GFN094]
gi|445145592|ref|ZP_21387554.1| recombinase A [Salmonella enterica subsp. enterica serovar Dublin
str. SL1438]
gi|445159873|ref|ZP_21393361.1| recombinase A [Salmonella enterica subsp. enterica serovar Dublin
str. HWS51]
gi|445162147|ref|ZP_21393711.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE8a]
gi|445185520|ref|ZP_21398973.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 20037]
gi|445220783|ref|ZP_21403037.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE10]
gi|445244887|ref|ZP_21408138.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 436]
gi|445336184|ref|ZP_21415626.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 18569]
gi|445351795|ref|ZP_21420528.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13-1]
gi|445364900|ref|ZP_21425057.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. PT23]
gi|452123347|ref|YP_007473595.1| recombinase A [Salmonella enterica subsp. enterica serovar Javiana
str. CFSAN001992]
gi|54039032|sp|P65978.2|RECA_SALTI RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|54041792|sp|P65977.2|RECA_SALTY RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|76363339|sp|Q57KU4.3|RECA_SALCH RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|189039605|sp|A9N0C5.1|RECA_SALPB RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|226723638|sp|B5F352.1|RECA_SALA4 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|226726276|sp|B5FSY0.1|RECA_SALDC RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|226726295|sp|B5QV78.1|RECA_SALEP RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|226726296|sp|B5RDF4.1|RECA_SALG2 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|238690630|sp|B4TF13.1|RECA_SALHS RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|238693603|sp|B4T3A0.1|RECA_SALNS RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|238693680|sp|B4TT06.1|RECA_SALSV RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|254790444|sp|C0PWM2.1|RECA_SALPC RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|25300503|pir||AH0843 RecA protein [imported] - Salmonella enterica subsp. enterica
serovar Typhi (strain CT18)
gi|16421374|gb|AAL21709.1| DNA strand exchange and recombination protein [Salmonella enterica
subsp. enterica serovar Typhimurium str. LT2]
gi|16503906|emb|CAD05935.1| RecA protein [Salmonella enterica subsp. enterica serovar Typhi]
gi|29138722|gb|AAO70291.1| recA protein [Salmonella enterica subsp. enterica serovar Typhi
str. Ty2]
gi|62128965|gb|AAX66668.1| DNA strand exchange and recombination protein with proteiase and
nuclease activity [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|109453380|gb|ABG34170.1| RecA [Salmonella enterica subsp. enterica]
gi|109453382|gb|ABG34171.1| RecA [Salmonella enterica subsp. enterica]
gi|109453384|gb|ABG34172.1| RecA [Salmonella enterica subsp. enterica]
gi|109453386|gb|ABG34173.1| RecA [Salmonella enterica subsp. enterica]
gi|109453388|gb|ABG34174.1| RecA [Salmonella enterica subsp. enterica]
gi|109453390|gb|ABG34175.1| RecA [Salmonella enterica subsp. enterica]
gi|109453392|gb|ABG34176.1| RecA [Salmonella enterica subsp. enterica]
gi|109453394|gb|ABG34177.1| RecA [Salmonella enterica subsp. enterica]
gi|109453396|gb|ABG34178.1| RecA [Salmonella enterica subsp. enterica]
gi|109453398|gb|ABG34179.1| RecA [Salmonella enterica subsp. enterica]
gi|109453400|gb|ABG34180.1| RecA [Salmonella enterica subsp. enterica]
gi|161365091|gb|ABX68859.1| hypothetical protein SPAB_03518 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194405435|gb|ACF65657.1| protein RecA [Salmonella enterica subsp. enterica serovar Newport
str. SL254]
gi|194409788|gb|ACF70007.1| protein RecA [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|194712210|gb|ACF91431.1| protein RecA [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|195633723|gb|EDX52137.1| protein RecA [Salmonella enterica subsp. enterica serovar Newport
str. SL317]
gi|197214331|gb|ACH51728.1| protein RecA [Salmonella enterica subsp. enterica serovar Agona
str. SL483]
gi|197241862|gb|EDY24482.1| protein RecA [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA23]
gi|197290652|gb|EDY30006.1| protein RecA [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|197936344|gb|ACH73677.1| protein RecA [Salmonella enterica subsp. enterica serovar Dublin
str. CT_02021853]
gi|199603797|gb|EDZ02342.1| protein RecA [Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
gi|204322392|gb|EDZ07589.1| protein RecA [Salmonella enterica subsp. enterica serovar Javiana
str. GA_MM04042433]
gi|205273554|emb|CAR38541.1| Recombinase A [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|205327960|gb|EDZ14724.1| protein RecA [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|205335992|gb|EDZ22756.1| protein RecA [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|205342838|gb|EDZ29602.1| protein RecA [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|205349184|gb|EDZ35815.1| protein RecA [Salmonella enterica subsp. enterica serovar Hadar
str. RI_05P066]
gi|206709896|emb|CAR34249.1| Recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|224469134|gb|ACN46964.1| recombinase A [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|261247965|emb|CBG25798.1| RecA protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|267994946|gb|ACY89831.1| recombinase A [Salmonella enterica subsp. enterica serovar
Typhimurium str. 14028S]
gi|301159389|emb|CBW18907.1| RecA protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|312913847|dbj|BAJ37821.1| recombinase A [Salmonella enterica subsp. enterica serovar
Typhimurium str. T000240]
gi|320087232|emb|CBY96997.1| Protein recA Recombinase A [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|321223382|gb|EFX48448.1| RecA protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. TN061786]
gi|322614352|gb|EFY11283.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 315996572]
gi|322621583|gb|EFY18436.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-1]
gi|322624444|gb|EFY21277.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-3]
gi|322628775|gb|EFY25558.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-4]
gi|322633498|gb|EFY30240.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-1]
gi|322635926|gb|EFY32634.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-2]
gi|322639634|gb|EFY36319.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 531954]
gi|322646817|gb|EFY43320.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. NC_MB110209-0054]
gi|322650585|gb|EFY46990.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. OH_2009072675]
gi|322654803|gb|EFY51122.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. CASC_09SCPH15965]
gi|322659023|gb|EFY55276.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 19N]
gi|322664410|gb|EFY60604.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 81038-01]
gi|322668341|gb|EFY64498.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. MD_MDA09249507]
gi|322673679|gb|EFY69780.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 414877]
gi|322677740|gb|EFY73803.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 366867]
gi|322681430|gb|EFY77462.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 413180]
gi|322683832|gb|EFY79842.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 446600]
gi|322715815|gb|EFZ07386.1| recombinase A [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SCSA50]
gi|323131180|gb|ADX18610.1| recombinase A [Salmonella enterica subsp. enterica serovar
Typhimurium str. ST4/74]
gi|323193779|gb|EFZ78982.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 609458-1]
gi|323200249|gb|EFZ85331.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 556150-1]
gi|323203248|gb|EFZ88277.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 609460]
gi|323212793|gb|EFZ97604.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 556152]
gi|323216319|gb|EGA01046.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. MB101509-0077]
gi|323221067|gb|EGA05498.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. MB102109-0047]
gi|323226888|gb|EGA11070.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. MB110209-0055]
gi|323230828|gb|EGA14946.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. MB111609-0052]
gi|323234821|gb|EGA18907.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009083312]
gi|323238860|gb|EGA22910.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009085258]
gi|323241560|gb|EGA25591.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 315731156]
gi|323248293|gb|EGA32229.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2009159199]
gi|323251123|gb|EGA34996.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008282]
gi|323255838|gb|EGA39586.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008283]
gi|323263141|gb|EGA46679.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008284]
gi|323264354|gb|EGA47860.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008285]
gi|323271181|gb|EGA54609.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008287]
gi|326624559|gb|EGE30904.1| recombinase A [Salmonella enterica subsp. enterica serovar Dublin
str. SD3246]
gi|326628881|gb|EGE35224.1| recombinase A [Salmonella enterica subsp. enterica serovar
Gallinarum str. SG9]
gi|332989701|gb|AEF08684.1| recombinase A [Salmonella enterica subsp. enterica serovar
Typhimurium str. UK-1]
gi|357207060|gb|AET55106.1| recombinase A [Salmonella enterica subsp. enterica serovar
Gallinarum/pullorum str. RKS5078]
gi|363551524|gb|EHL35841.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. LQC 10]
gi|363551874|gb|EHL36186.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB31]
gi|363563885|gb|EHL47951.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB30]
gi|363564241|gb|EHL48298.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. ATCC BAA710]
gi|363567992|gb|EHL51988.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 29N]
gi|363572572|gb|EHL56463.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 42N]
gi|366064381|gb|EHN28580.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035318]
gi|366064817|gb|EHN29014.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 80959-06]
gi|366067053|gb|EHN31207.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035320]
gi|366067636|gb|EHN31784.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035321]
gi|366069938|gb|EHN34056.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035278]
gi|366076153|gb|EHN40192.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035327]
gi|366083686|gb|EHN47602.1| recombinase A [Salmonella enterica subsp. enterica serovar Pomona
str. ATCC 10729]
gi|366830428|gb|EHN57299.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. 507440-20]
gi|372207718|gb|EHP21217.1| recombinase A [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008286]
gi|374354758|gb|AEZ46519.1| hypothetical protein STBHUCCB_28700 [Salmonella enterica subsp.
enterica serovar Typhi str. P-stx-12]
gi|379984323|emb|CCF89462.1| recombinase A [Salmonella enterica subsp. enterica serovar
Senftenberg str. SS209]
gi|380464325|gb|AFD59728.1| RecA protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. 798]
gi|381290523|gb|EIC31787.1| recombinase A [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41579]
gi|381293838|gb|EIC34978.1| recombinase A [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41563]
gi|381307136|gb|EIC48002.1| recombinase A [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41573]
gi|381314944|gb|EIC55709.1| recombinase A [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41565]
gi|381315050|gb|EIC55813.1| recombinase A [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41566]
gi|383799559|gb|AFH46641.1| RecA protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. B182]
gi|392616890|gb|EIW99318.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. Levine 15]
gi|392618793|gb|EIX01185.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. Levine 1]
gi|392730279|gb|EIZ87524.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 21539]
gi|392742437|gb|EIZ99525.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 35199]
gi|392742961|gb|EJA00039.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 35185]
gi|392751256|gb|EJA08211.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 33953]
gi|392751985|gb|EJA08928.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 35188]
gi|392756163|gb|EJA13061.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 21559]
gi|392764196|gb|EJA20998.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19567]
gi|392764625|gb|EJA21423.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19449]
gi|392764744|gb|EJA21538.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19447]
gi|392782654|gb|EJA39285.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 22513]
gi|392783425|gb|EJA40046.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 21550]
gi|392783690|gb|EJA40305.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 35202]
gi|392785614|gb|EJA42185.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 22425]
gi|392790643|gb|EJA47137.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 21538]
gi|392799970|gb|EJA56209.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM N1543]
gi|392800649|gb|EJA56880.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 22462]
gi|392802701|gb|EJA58910.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM N18486]
gi|392807901|gb|EJA63964.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 21554]
gi|392824307|gb|EJA80094.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 37978]
gi|392829051|gb|EJA84735.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19593]
gi|392839435|gb|EJA94975.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 4176]
gi|395980978|gb|EJH90200.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 622731-39]
gi|395981631|gb|EJH90852.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 640631]
gi|395987646|gb|EJH96808.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639016-6]
gi|395995445|gb|EJI04510.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-6]
gi|395995453|gb|EJI04517.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 485549-17]
gi|396007319|gb|EJI16275.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-0424]
gi|396008963|gb|EJI17896.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-26]
gi|396015142|gb|EJI24025.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-70]
gi|396018764|gb|EJI27626.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-22]
gi|396023567|gb|EJI32365.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-46]
gi|396023747|gb|EJI32539.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-50]
gi|396027382|gb|EJI36145.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-37]
gi|396035152|gb|EJI43833.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-1427]
gi|396042113|gb|EJI50735.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-2659]
gi|396043661|gb|EJI52259.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 78-1757]
gi|396048297|gb|EJI56846.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22510-1]
gi|396054530|gb|EJI63022.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 8b-1]
gi|396056280|gb|EJI64756.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648905 5-18]
gi|396068421|gb|EJI76769.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 6-18]
gi|396069287|gb|EJI77625.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-3079]
gi|396070424|gb|EJI78752.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 58-6482]
gi|402520211|gb|EJW27565.1| recombinase A [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00326]
gi|402522766|gb|EJW30086.1| recombinase A [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00325]
gi|402525930|gb|EJW33212.1| recombinase A [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00322]
gi|402531481|gb|EJW38692.1| recombinase A [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00328]
gi|414015294|gb|EKS99110.1| recombinase A [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm1]
gi|414016288|gb|EKT00061.1| recombinase A [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm8]
gi|414016976|gb|EKT00726.1| recombinase A [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm2]
gi|414029538|gb|EKT12695.1| recombinase A [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm9]
gi|414031085|gb|EKT14160.1| recombinase A [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm3]
gi|414034615|gb|EKT17540.1| recombinase A [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm4]
gi|414044463|gb|EKT26905.1| recombinase A [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm6]
gi|414044992|gb|EKT27419.1| recombinase A [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm10]
gi|414050201|gb|EKT32382.1| recombinase A [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm11]
gi|414057444|gb|EKT39198.1| recombinase A [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm12]
gi|434943347|gb|ELL49485.1| recombinase A [Salmonella enterica subsp. enterica serovar Pullorum
str. ATCC 9120]
gi|434959512|gb|ELL52958.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS44]
gi|434963135|gb|ELL56261.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE30663]
gi|434968076|gb|ELL60831.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22704]
gi|434968619|gb|ELL61371.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1882]
gi|434971099|gb|ELL63660.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1884]
gi|434981376|gb|ELL73263.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1594]
gi|434984220|gb|ELL75960.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1566]
gi|434985779|gb|ELL77466.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1580]
gi|434992586|gb|ELL84025.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1543]
gi|434999637|gb|ELL90811.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1441]
gi|435005394|gb|ELL96316.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1810]
gi|435005532|gb|ELL96452.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1558]
gi|435012824|gb|ELM03499.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1018]
gi|435019627|gb|ELM10071.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1010]
gi|435022796|gb|ELM13092.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1729]
gi|435029251|gb|ELM19309.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0895]
gi|435033397|gb|ELM23289.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0899]
gi|435034204|gb|ELM24094.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1457]
gi|435035330|gb|ELM25175.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1747]
gi|435045598|gb|ELM35224.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0968]
gi|435046366|gb|ELM35981.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1444]
gi|435058969|gb|ELM48276.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1445]
gi|435062787|gb|ELM51961.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1559]
gi|435064710|gb|ELM53830.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1565]
gi|435072029|gb|ELM60958.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1808]
gi|435077250|gb|ELM66006.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1811]
gi|435083848|gb|ELM72449.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1455]
gi|435085349|gb|ELM73902.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0956]
gi|435088589|gb|ELM77046.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1725]
gi|435093579|gb|ELM81919.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1575]
gi|435097827|gb|ELM86086.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1745]
gi|435107553|gb|ELM95536.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1791]
gi|435108008|gb|ELM95986.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 576709]
gi|435108409|gb|ELM96374.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1795]
gi|435118612|gb|ELN06263.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 635290-58]
gi|435126541|gb|ELN13935.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-19]
gi|435131501|gb|ELN18712.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-16]
gi|435136193|gb|ELN23283.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-9]
gi|435137459|gb|ELN24510.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-2]
gi|435140885|gb|ELN27827.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629163]
gi|435149294|gb|ELN35990.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_N202]
gi|435150416|gb|ELN37088.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE15-1]
gi|435156718|gb|ELN43208.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_56-3991]
gi|435159534|gb|ELN45852.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_81-2490]
gi|435160890|gb|ELN47132.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_76-3618]
gi|435172560|gb|ELN58103.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL909]
gi|435173221|gb|ELN58746.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL913]
gi|435178130|gb|ELN63366.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_69-4941]
gi|435180133|gb|ELN65241.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 638970-15]
gi|435191669|gb|ELN76225.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 17927]
gi|435193223|gb|ELN77702.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS4]
gi|435204946|gb|ELN88595.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 22-17]
gi|435207343|gb|ELN90816.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22558]
gi|435209948|gb|ELN93219.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 40-18]
gi|435215110|gb|ELN97842.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13183-1]
gi|435217355|gb|ELN99789.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 4-1]
gi|435218439|gb|ELO00840.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 1-1]
gi|435226468|gb|ELO08033.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642046 4-7]
gi|435227561|gb|ELO09052.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648898 4-5]
gi|435242249|gb|ELO22560.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648900 1-16]
gi|435246053|gb|ELO26074.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 1-17]
gi|435247416|gb|ELO27367.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648899 3-17]
gi|435251532|gb|ELO31143.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 39-2]
gi|435257235|gb|ELO36529.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648902 6-8]
gi|435257564|gb|ELO36846.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648903 1-6]
gi|435265557|gb|ELO44385.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 653049 13-19]
gi|435273630|gb|ELO51895.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648904 3-6]
gi|435277088|gb|ELO55046.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 9-7]
gi|435277507|gb|ELO55448.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 8-1]
gi|435288443|gb|ELO65462.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 42-20]
gi|435290853|gb|ELO67746.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 76-2651]
gi|435294365|gb|ELO71001.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 16-16]
gi|435296801|gb|ELO73152.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. SARB17]
gi|435299928|gb|ELO76023.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 33944]
gi|435314443|gb|ELO87868.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 81-2625]
gi|435324182|gb|ELO96115.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 62-1976]
gi|435327614|gb|ELO99265.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 53-407]
gi|435334800|gb|ELP05234.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-5646]
gi|435335951|gb|ELP06017.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 6.0562-1]
gi|436412128|gb|ELP10072.1| recombinase A [Salmonella enterica subsp. enterica serovar Agona
str. SH08SF124]
gi|436416899|gb|ELP14800.1| recombinase A [Salmonella enterica subsp. enterica serovar Agona
str. SH11G1113]
gi|436417365|gb|ELP15260.1| recombinase A [Salmonella enterica subsp. enterica serovar Agona
str. SH10GFN094]
gi|444844414|gb|ELX69654.1| recombinase A [Salmonella enterica subsp. enterica serovar Dublin
str. HWS51]
gi|444846365|gb|ELX71546.1| recombinase A [Salmonella enterica subsp. enterica serovar Dublin
str. SL1438]
gi|444868887|gb|ELX93498.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE8a]
gi|444870038|gb|ELX94582.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 20037]
gi|444870486|gb|ELX94988.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE10]
gi|444874140|gb|ELX98406.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13-1]
gi|444874272|gb|ELX98537.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 18569]
gi|444883110|gb|ELY07018.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. PT23]
gi|444890491|gb|ELY13820.1| recombinase A [Salmonella enterica subsp. enterica serovar
Enteritidis str. 436]
gi|451912351|gb|AGF84157.1| recombinase A [Salmonella enterica subsp. enterica serovar Javiana
str. CFSAN001992]
Length = 353
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/347 (55%), Positives = 245/347 (70%), Gaps = 5/347 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV+VVDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+G+ +GS+
Sbjct: 185 QSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKEGDNVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +K K KAGA ++YN +G
Sbjct: 243 TRVKVVKNKIAAPFKQAEFQILYGEGINFYGELVDLGVKEKLIEKAGAWYSYNGEKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHK-EPQTAVTDEDSTEET 347
K +L EN + +E+ ++RE L+ + P AV D + ET
Sbjct: 303 KANATTWLKENPATAKEIEKRVRELLLSNQNATPDFAVDDSEGVAET 349
>gi|89143139|emb|CAJ41871.1| recombinase A [Pseudochrobactrum saccharolyticum]
Length = 302
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 180/303 (59%), Positives = 233/303 (76%), Gaps = 3/303 (0%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL AL QI SFGKGSIM LG++ + V TGS +LDIALG GGLPKGR+VEIYGP
Sbjct: 2 ALDAALSQIERSFGKGSIMRLGQNDKVVEIETVPTGSLSLDIALGVGGLPKGRIVEIYGP 61
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTT+ALH IAEAQ++GG C F+DAEHALDP A +GV ENLL++QPD GEQAL
Sbjct: 62 ESSGKTTMALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQALE 121
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ DTL+RSG++DV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S S T
Sbjct: 122 ITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISKSNT 181
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+ +E +G+Q VK
Sbjct: 182 MVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKERDEIVGNQTRVK 239
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGKEAF 305
+VKNKLAPPFK +F++ +G G+S+ E++DL +K K+G+ F+YN + +G++
Sbjct: 240 VVKNKLAPPFKQVEFDIMYGAGVSKTGELVDLGVKAGIVEKSGSWFSYNSQRLGQGRDNA 299
Query: 306 KQF 308
K F
Sbjct: 300 KNF 302
>gi|217969145|ref|YP_002354379.1| recombinase A [Thauera sp. MZ1T]
gi|217506472|gb|ACK53483.1| recA protein [Thauera sp. MZ1T]
Length = 345
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 185/319 (57%), Positives = 235/319 (73%), Gaps = 3/319 (0%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL AL QI FGKGSIM +G R + VSTGS LDIALG GGLP+GRVVEIYGP
Sbjct: 8 ALSAALSQIEKQFGKGSIMRMGDGSIERDIQTVSTGSLGLDIALGLGGLPRGRVVEIYGP 67
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTTL L VIAE Q+ GG FIDAEHALD AE +GV E+LL++QPD GEQAL
Sbjct: 68 ESSGKTTLTLQVIAEMQKLGGTAAFIDAEHALDVGYAEKLGVDIEDLLISQPDTGEQALE 127
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ D L+RSG VD+VV+DSVAAL PK E++GEMGD +QARLMSQALRKL+ ++ + T
Sbjct: 128 IADMLVRSGGVDIVVIDSVAALTPKAEIEGEMGDQLPGLQARLMSQALRKLTANIKRTNT 187
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
++IFINQ+R K+ FG P E T GGNALKFYASVR++I+R G +KKG+E +GS+ VK
Sbjct: 188 LVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRMDIRRTGTIKKGDEVVGSETRVK 245
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRGKEAF 305
+VKNK++PPFK A F++ +G+GISRE EIIDL ++HK K+GA + Y D+ +GK+
Sbjct: 246 VVKNKVSPPFKEAHFDILYGEGISREGEIIDLGVEHKIVDKSGAWYAYKGDKIGQGKDNS 305
Query: 306 KQFLVENESVREELVIKLR 324
++FL N + E+ K+R
Sbjct: 306 REFLRANPVLAREIENKVR 324
>gi|257068236|ref|YP_003154491.1| recombination protein RecA [Brachybacterium faecium DSM 4810]
gi|256559054|gb|ACU84901.1| protein RecA [Brachybacterium faecium DSM 4810]
Length = 368
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/324 (58%), Positives = 242/324 (74%), Gaps = 4/324 (1%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
+L AL QI FGKGSIM LG P V V+ TGS ALD ALG GGLP+GR+VEIYGP
Sbjct: 18 SLDNALAQIDRQFGKGSIMRLGDDTRP-PVEVIPTGSVALDAALGVGGLPRGRIVEIYGP 76
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTTLALH +A AQR GG FIDAEHA+DP A+ +GV T+ LL++QPD GEQAL
Sbjct: 77 ESSGKTTLALHAVANAQRNGGIAAFIDAEHAMDPEYAKKLGVDTDALLVSQPDTGEQALE 136
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ D LIRSG++D+VV+DSVAALVPK E++GEMGD+H+ +QARLMSQALRKL+ +LS S T
Sbjct: 137 ITDMLIRSGALDIVVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTGALSSSGT 196
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
IFINQ+R K+ F FG P E T GG ALKFYASVR++I+RI +K G +++G++ VK
Sbjct: 197 TAIFINQLREKIGVF-FGSP-ETTTGGKALKFYASVRMDIRRIETLKAGTDSVGNRTRVK 254
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRGKEAF 305
+VKNK+APPFK A+F++ +G+GISRE ++DL ++H K+GA FTY D+ +GKE
Sbjct: 255 VVKNKMAPPFKQAEFDILYGEGISREGGLLDLGVEHGVVRKSGAWFTYEGDQLGQGKENS 314
Query: 306 KQFLVENESVREELVIKLREKLVV 329
+QFL +N + E+ K+ L V
Sbjct: 315 RQFLKDNPDLAAEIEEKILRTLGV 338
>gi|221133348|ref|ZP_03559653.1| recA protein [Glaciecola sp. HTCC2999]
Length = 344
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 185/330 (56%), Positives = 247/330 (74%), Gaps = 4/330 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKG+IM LG + + VSTGS ++DIALG GGLP GRVVEI
Sbjct: 6 KTRALSAALGQIEKQFGKGAIMRLGDN-QAMDIESVSTGSLSIDIALGIGGLPCGRVVEI 64
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIAEAQ+ G C F+DAEHALDP AE +GV + LL++QPD GEQ
Sbjct: 65 YGPESSGKTTLTLQVIAEAQKVGKTCAFVDAEHALDPVYAEALGVNIDELLVSQPDTGEQ 124
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RSG+VDVV+VDSVAAL PK E++G+MGD+H+ +QARLMSQALRKL+ ++
Sbjct: 125 ALEICDMLVRSGAVDVVIVDSVAALTPKAEIEGDMGDSHVGLQARLMSQALRKLTGNIKR 184
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ FG P E T GGNALKFY+SVRL+I+RIG +K G+E +G++
Sbjct: 185 SNTLVIFINQIRLKIGVM-FGNP-ETTTGGNALKFYSSVRLDIRRIGAIKDGDEIVGNET 242
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGK 302
VK+VKNK+APPFK A+F++ +G+GIS+E+E+IDL +K K KAGA ++YN +R +GK
Sbjct: 243 RVKVVKNKVAPPFKQAEFQIMYGQGISKEAELIDLGVKQKLVEKAGAWYSYNGERIGQGK 302
Query: 303 EAFKQFLVENESVREELVIKLREKLVVDHK 332
++L E+ + ++ ++R +L+ K
Sbjct: 303 ANVVKYLKEHPEMANDIEARIRAELLCKAK 332
>gi|90580349|ref|ZP_01236156.1| recombinase A [Photobacterium angustum S14]
gi|90438651|gb|EAS63835.1| recombinase A [Vibrio angustum S14]
Length = 349
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 190/352 (53%), Positives = 250/352 (71%), Gaps = 11/352 (3%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGSIM LG + T + +STGS +LDIALG GGLP GR+VEI
Sbjct: 5 KQKALAAALGQIEKQFGKGSIMKLGDNRT-MDIETISTGSLSLDIALGAGGLPMGRIVEI 63
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L IA AQR+G C FIDAEHALDP A+ +GV + LL++QPD GEQ
Sbjct: 64 YGPESSGKTTLTLETIAAAQRKGKTCAFIDAEHALDPIYAQKLGVDIDQLLVSQPDTGEQ 123
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L RSG+VD++VVDSVAAL PK E++GEMGD+HM +QAR++SQA+RKL+ +L
Sbjct: 124 ALEICDALARSGAVDLIVVDSVAALTPKAEIEGEMGDSHMGLQARMLSQAMRKLTGNLKQ 183
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S + IFINQ+R K+ FG P E T GGNALKFYASVRL+I+R G +K+G+E +G++
Sbjct: 184 SNCMCIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRTGAIKEGDEVVGNET 241
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGK 302
+K+VKNK+A PFK A+ ++ +G+G +R E+IDL +KHK KAGA ++Y D+ +GK
Sbjct: 242 RIKVVKNKIAAPFKQAETQILYGQGFNRNGELIDLGVKHKLVEKAGAWYSYQGDKIGQGK 301
Query: 303 EAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETVSTISPD 354
++LVEN ++ E+ KLR+ L+ T VT+ D +E S I D
Sbjct: 302 ANSCKYLVENPAIAAEIETKLRDLLL-------TPVTEGDQVDEKNSDIEED 346
>gi|418843372|ref|ZP_13398169.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19443]
gi|418856879|ref|ZP_13411515.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19470]
gi|418862497|ref|ZP_13417037.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19536]
gi|392816708|gb|EJA72630.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19443]
gi|392835764|gb|EJA91355.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19470]
gi|392835899|gb|EJA91488.1| recombinase A [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19536]
Length = 353
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/347 (55%), Positives = 245/347 (70%), Gaps = 5/347 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV+VVDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+G+ +GS+
Sbjct: 185 QSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKEGDNVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +K K KAGA ++YN +G
Sbjct: 243 TRVKVVKNKIAAPFKQAEFQILYGEGINFYGELVDLGVKEKLIEKAGAWYSYNGEKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHK-EPQTAVTDEDSTEET 347
K +L EN + +E+ ++RE L+ + P AV D + ET
Sbjct: 303 KANATTWLKENPTTAKEIEKRVRELLLSNQNATPDFAVDDSEGVAET 349
>gi|22770568|gb|AAN06659.1|AF497231_1 DNA recombinase [Listeria monocytogenes]
Length = 348
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/354 (51%), Positives = 261/354 (73%), Gaps = 12/354 (3%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
M+ + AL QAL QI FGKGSIM LG + +++ +S+GS ALDIALG GG P+GR+
Sbjct: 1 MNDRQAALDQALKQIEKQFGKGSIMKLGEH-SDQNISTISSGSLALDIALGVGGYPRGRI 59
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+E+YGPE+SGKTT+ALH IAE Q QGG FIDAEHALDP+ A+ +GV + LLL+QPD
Sbjct: 60 IEVYGPESSGKTTVALHAIAEVQAQGGTAAFIDAEHALDPAYAKNLGVNIDELLLSQPDT 119
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + + L+RSG+VD++V+DSVAALVP+ E++GEMGDAH+ +QARLMSQALRKLS
Sbjct: 120 GEQALEIAEALVRSGAVDMLVIDSVAALVPRAEIEGEMGDAHVGLQARLMSQALRKLSGV 179
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
++ S+TI IFINQ+R K+ FG P E+T GG ALKFY++VRL ++R +K+G + +G
Sbjct: 180 INKSKTIAIFINQIREKVGVM-FGNP-EITPGGRALKFYSTVRLEVRRAEXLKQGTDVMG 237
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF- 299
++ +K+VKNK+APPF+ A+ ++ +G+GISRE E++D+A + +K+G+ ++Y +
Sbjct: 238 NKTKIKVVKNKVAPPFRIAEVDIMYGEGISREGELVDMAAEVDVINKSGSWYSYKEERIG 297
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVD--HKEPQTAVTDEDSTEETVSTI 351
+G+E KQ+L E+ +R+E+ ++RE+ +D KEP D EET+S +
Sbjct: 298 QGRENAKQYLKEHTDIRDEISKRVREEYEIDGSSKEPL------DEKEETLSLL 345
>gi|163868622|ref|YP_001609831.1| recombinase A [Bartonella tribocorum CIP 105476]
gi|189039590|sp|A9IVY9.1|RECA_BART1 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|161018278|emb|CAK01836.1| RecA protein [Bartonella tribocorum CIP 105476]
Length = 347
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 189/324 (58%), Positives = 238/324 (73%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI SFGKGSIM LG+ + V TGS +LDIALG GGLPKGR+VEI
Sbjct: 3 KTKALDAALSQIERSFGKGSIMRLGQKEQVVEIETVPTGSLSLDIALGIGGLPKGRIVEI 62
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH IAEAQ+ GG C FIDAEHALDP A +GV ENL ++QPD GEQ
Sbjct: 63 YGPESSGKTTLALHAIAEAQKGGGICAFIDAEHALDPIYARKLGVDLENLFISQPDTGEQ 122
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + +TL+RSG+VDV+VVDSVAAL P+ E+DGEMGDA +QARLMS+ALRKL+ S+
Sbjct: 123 ALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDALPGLQARLMSKALRKLTASIFR 182
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K + +G+Q
Sbjct: 183 SNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKDRDMIVGNQT 240
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G+GIS+ E+IDL +K K+G+ F+YN + +G+
Sbjct: 241 RVKVVKNKLAPPFKQVEFDIIYGEGISKLGELIDLGVKVGIVEKSGSWFSYNSQRLGQGR 300
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E KQFL E+ + E+ LR+
Sbjct: 301 ENAKQFLREHAEIAAEIETALRQN 324
>gi|387926959|ref|ZP_10129638.1| recombinase A [Bacillus methanolicus PB1]
gi|387589103|gb|EIJ81423.1| recombinase A [Bacillus methanolicus PB1]
Length = 346
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/347 (52%), Positives = 252/347 (72%), Gaps = 7/347 (2%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
MS + AL+ AL QI FGKGSIM LG T R + V +GS ALD ALG GG P+GR+
Sbjct: 1 MSDRQAALEMALKQIEKQFGKGSIMKLGEQ-TDRRISTVPSGSLALDAALGVGGYPRGRI 59
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+EIYGPE+SGKTT+ALH IAE Q QGG FIDAEHALDP A+ +GV + LLL+QPD
Sbjct: 60 IEIYGPESSGKTTVALHAIAEVQAQGGQAAFIDAEHALDPIYAQKLGVDIDELLLSQPDT 119
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + + L+RSG+VD++V+DSVAALVPK E++GEMGD+H+ +QARLMSQALRKLS +
Sbjct: 120 GEQALEIAEALVRSGAVDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLSGA 179
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
++ S+TI IFINQ+R K+ FG P E T GG ALKFY+++RL ++R +K+G + +G
Sbjct: 180 INKSKTIAIFINQIREKVGVM-FGNP-ETTPGGRALKFYSTIRLEVRRAEQLKQGNDMVG 237
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF- 299
++ +K+VKNK+APPF+TA+ ++ +G+GIS+E EIID+ + K+G+ ++YND
Sbjct: 238 NKTKIKVVKNKVAPPFRTAEVDIMYGEGISKEGEIIDMGSELDIIQKSGSWYSYNDERLG 297
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEE 346
+G+E KQ+L EN +R E+ K+RE ++ + +T+ D EE
Sbjct: 298 QGRENAKQYLKENVELRNEIQQKIREHFGLNEIK---TITEPDEQEE 341
>gi|395777979|ref|ZP_10458492.1| protein recA [Bartonella elizabethae Re6043vi]
gi|423715905|ref|ZP_17690126.1| protein recA [Bartonella elizabethae F9251]
gi|395418288|gb|EJF84615.1| protein recA [Bartonella elizabethae Re6043vi]
gi|395429207|gb|EJF95281.1| protein recA [Bartonella elizabethae F9251]
Length = 347
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 189/324 (58%), Positives = 238/324 (73%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI SFGKGSIM LG+ + V TGS +LDIALG GGLPKGR+VEI
Sbjct: 3 KTKALDAALSQIERSFGKGSIMRLGQKEQVVEIETVPTGSLSLDIALGIGGLPKGRIVEI 62
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH IAEAQ+ GG C FIDAEHALDP A +GV ENL ++QPD GEQ
Sbjct: 63 YGPESSGKTTLALHAIAEAQKGGGICAFIDAEHALDPIYARKLGVDLENLFISQPDTGEQ 122
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + +TL+RSG+VDV+VVDSVAAL P+ E+DGEMGDA +QARLMS+ALRKL+ S+
Sbjct: 123 ALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDALPGLQARLMSKALRKLTASIFR 182
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K + +G+Q
Sbjct: 183 SNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKDRDMIVGNQT 240
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G+GIS+ E+IDL +K K+G+ F+YN + +G+
Sbjct: 241 RVKVVKNKLAPPFKQVEFDIIYGEGISKLGELIDLGVKVGIVEKSGSWFSYNSQRLGQGR 300
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E KQFL E+ + E+ LR+
Sbjct: 301 ENAKQFLREHAEIAAEIETALRQN 324
>gi|402298054|ref|ZP_10817778.1| recombinase A [Bacillus alcalophilus ATCC 27647]
gi|401726698|gb|EJS99914.1| recombinase A [Bacillus alcalophilus ATCC 27647]
Length = 349
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 185/346 (53%), Positives = 253/346 (73%), Gaps = 4/346 (1%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
MS++ AL AL QI FGKGSIM LG T + V +S+GS ALDIALG GG P+GR+
Sbjct: 1 MSERKAALDMALRQIEKQFGKGSIMKLGEQ-TDQRVSTISSGSLALDIALGVGGYPRGRI 59
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+E+YGPE+SGKTT+ALH IAE QR GG FIDAEHALDP A+ +GV + LLL+QPD
Sbjct: 60 IEVYGPESSGKTTVALHAIAEVQRTGGQAAFIDAEHALDPVYAQKLGVNIDELLLSQPDT 119
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + + L+RSG++D++V+DSVAALVPK E++GEMGD+H+ +QARLMSQALRKLS +
Sbjct: 120 GEQALEIAEALVRSGAIDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLSGA 179
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
++ S+TI +FINQVR K+ FG P E T GG ALKFY+SVRL ++R +K+G E +G
Sbjct: 180 VNKSKTIAVFINQVREKIGVM-FGNP-ETTPGGRALKFYSSVRLEVRRAETLKQGNEMVG 237
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF- 299
++ +K+VKNK+APPFK A+ ++ +G+GISRE I+D+A + K+GA ++YN+
Sbjct: 238 NKTKIKVVKNKVAPPFKQAEVDIMYGEGISREGSILDIAAELDIVQKSGAWYSYNEERLG 297
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTE 345
+G+E KQF EN ++ EE+ K+R+ +D + A T+E+ E
Sbjct: 298 QGRENAKQFFKENGNLTEEVERKIRQHHGLDGEILVDAPTEEEIDE 343
>gi|402311624|ref|ZP_10830562.1| RecA protein [Lachnospiraceae bacterium ICM7]
gi|400371574|gb|EJP24532.1| RecA protein [Lachnospiraceae bacterium ICM7]
Length = 388
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 186/361 (51%), Positives = 258/361 (71%), Gaps = 6/361 (1%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVV 61
S+K AL+ AL QI ++GKGS+M LG T V + TGS LDIALG GG+PKGR++
Sbjct: 20 SEKQAALESALTQIEKAYGKGSVMKLGDGNTNMFVETIPTGSLGLDIALGVGGIPKGRII 79
Query: 62 EIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCG 121
E+YGPE+SGKTT+ALH++AEAQ+ GG FIDAEHALDP A+ IGV + L ++QPD G
Sbjct: 80 EVYGPESSGKTTVALHMVAEAQKLGGIAAFIDAEHALDPVYADKIGVNIDELYVSQPDNG 139
Query: 122 EQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSL 181
EQAL + +T++RSG++D+++VDSVAALVPKGE++G+MGD+HM +QARLMSQ LRKL+ +
Sbjct: 140 EQALEITETMVRSGAIDIIIVDSVAALVPKGEIEGDMGDSHMGLQARLMSQGLRKLTGIV 199
Query: 182 SLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGS 241
S S I+IFINQ+R K+ FG P E T GG ALKFYASVRL+++++ +K+G E IG+
Sbjct: 200 SKSNCIVIFINQLRDKIGVM-FGSP-ETTTGGRALKFYASVRLDVRKVEQIKQGGEIIGT 257
Query: 242 QIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-R 300
+ +K+VKNK+APPFK A+F++ +G GIS+ EI+DLA+ K GA ++Y +
Sbjct: 258 KTRIKVVKNKVAPPFKEAEFDIMYGLGISKSGEILDLAVASDVVEKGGAWYSYEGNKIGQ 317
Query: 301 GKEAFKQFLVENESVREELVIKLREKLVVD-HKEPQTAVTD--EDSTEETVSTISPDSTD 357
G+E K FL+EN + E++ ++REK V++ K +T D +D EE + D D
Sbjct: 318 GRENAKTFLMENPEICEKIEEQIREKFVLEAEKNGKTLEYDSVDDDDEEFDGSPIEDDMD 377
Query: 358 E 358
E
Sbjct: 378 E 378
>gi|167550335|ref|ZP_02344092.1| protein RecA [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA29]
gi|168230885|ref|ZP_02655943.1| protein RecA [Salmonella enterica subsp. enterica serovar Kentucky
str. CDC 191]
gi|194469905|ref|ZP_03075889.1| protein RecA [Salmonella enterica subsp. enterica serovar Kentucky
str. CVM29188]
gi|194456269|gb|EDX45108.1| protein RecA [Salmonella enterica subsp. enterica serovar Kentucky
str. CVM29188]
gi|205324866|gb|EDZ12705.1| protein RecA [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA29]
gi|205334494|gb|EDZ21258.1| protein RecA [Salmonella enterica subsp. enterica serovar Kentucky
str. CDC 191]
Length = 353
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/347 (55%), Positives = 245/347 (70%), Gaps = 5/347 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV+VVDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+G+ +GS+
Sbjct: 185 QSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKEGDNVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +K K KAGA ++YN +G
Sbjct: 243 TRVKVVKNKIAAPFKQAEFQILYGEGINFYGELVDLGVKEKLIEKAGAWYSYNGEKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHK-EPQTAVTDEDSTEET 347
K +L EN + +E+ ++RE L+ + P AV D + ET
Sbjct: 303 KANATTWLKENPATAKEIEKRVRELLLSNQNTTPDFAVDDSEGVAET 349
>gi|297559643|ref|YP_003678617.1| recA protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM
43111]
gi|296844091|gb|ADH66111.1| recA protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM
43111]
Length = 378
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 187/335 (55%), Positives = 245/335 (73%), Gaps = 4/335 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
+D AL+ AL QI FGKGSIM LG P V + TG+ ALD+ALG GGLP+GRVVEI
Sbjct: 6 RDKALETALAQIERQFGKGSIMRLGDDDRP-PVESIPTGAIALDVALGIGGLPRGRVVEI 64
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ALH +A AQR GG F+DAEHALDP A+ IGV T++LLL+QPD GEQ
Sbjct: 65 YGPESSGKTTVALHAVASAQRMGGIAAFVDAEHALDPEYAKKIGVNTDDLLLSQPDTGEQ 124
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL +VD LIRSG+V ++V+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ +L
Sbjct: 125 ALEIVDMLIRSGAVSIIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKIAGALHQ 184
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
+ T IFINQ+R K+ FG P E T GG ALKFYASVRL+++RI +K G + +G++
Sbjct: 185 TNTTAIFINQLREKVGVM-FGSP-ETTTGGKALKFYASVRLDVRRIETLKDGTDAVGNRT 242
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK A+F++ +G G+SRE +IDL ++H K+GA +TY +GK
Sbjct: 243 RVKVVKNKVAPPFKQAEFDILYGVGVSREGSLIDLGVEHGIVRKSGAWYTYEGTQLGQGK 302
Query: 303 EAFKQFLVENESVREELVIKLREKLVVDHKEPQTA 337
E + FL EN + E+ K++EKL V K +A
Sbjct: 303 ENARNFLRENADMANEVEKKIKEKLGVPVKGDDSA 337
>gi|46907626|ref|YP_014015.1| recombinase A [Listeria monocytogenes serotype 4b str. F2365]
gi|47093404|ref|ZP_00231170.1| recA protein [Listeria monocytogenes str. 4b H7858]
gi|217964455|ref|YP_002350133.1| recombinase A [Listeria monocytogenes HCC23]
gi|226223999|ref|YP_002758106.1| Recombination protein recA [Listeria monocytogenes serotype 4b str.
CLIP 80459]
gi|254824542|ref|ZP_05229543.1| recA protein [Listeria monocytogenes FSL J1-194]
gi|254932583|ref|ZP_05265942.1| recombinase A [Listeria monocytogenes HPB2262]
gi|254991973|ref|ZP_05274163.1| recombinase A [Listeria monocytogenes FSL J2-064]
gi|290894424|ref|ZP_06557385.1| recA protein [Listeria monocytogenes FSL J2-071]
gi|300765752|ref|ZP_07075728.1| recA protein [Listeria monocytogenes FSL N1-017]
gi|386008170|ref|YP_005926448.1| recombination protein [Listeria monocytogenes L99]
gi|386026771|ref|YP_005947547.1| DNA recombination protein [Listeria monocytogenes M7]
gi|386732137|ref|YP_006205633.1| recombinase A [Listeria monocytogenes 07PF0776]
gi|404280954|ref|YP_006681852.1| recombination protein [Listeria monocytogenes SLCC2755]
gi|404286819|ref|YP_006693405.1| recombination protein [Listeria monocytogenes serotype 7 str.
SLCC2482]
gi|404407836|ref|YP_006690551.1| recombination protein [Listeria monocytogenes SLCC2376]
gi|405749742|ref|YP_006673208.1| recombination protein [Listeria monocytogenes ATCC 19117]
gi|405752618|ref|YP_006676083.1| recombination protein [Listeria monocytogenes SLCC2378]
gi|405755529|ref|YP_006678993.1| recombination protein [Listeria monocytogenes SLCC2540]
gi|406704171|ref|YP_006754525.1| recombination protein [Listeria monocytogenes L312]
gi|422409624|ref|ZP_16486585.1| protein RecA [Listeria monocytogenes FSL F2-208]
gi|422809479|ref|ZP_16857890.1| RecA protein [Listeria monocytogenes FSL J1-208]
gi|424714274|ref|YP_007014989.1| Protein RecA [Listeria monocytogenes serotype 4b str. LL195]
gi|424823159|ref|ZP_18248172.1| Protein recA [Listeria monocytogenes str. Scott A]
gi|59798318|sp|Q71ZS2.1|RECA_LISMF RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|254790436|sp|B8DFS9.1|RECA_LISMH RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|259563339|sp|C1L2V4.1|RECA_LISMC RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|22770570|gb|AAN06660.1|AF497232_1 DNA recombinase [Listeria monocytogenes]
gi|22770572|gb|AAN06661.1|AF497233_1 DNA recombinase [Listeria monocytogenes]
gi|22770574|gb|AAN06662.1|AF497234_1 DNA recombinase [Listeria monocytogenes]
gi|22770576|gb|AAN06663.1|AF497235_1 DNA recombinase [Listeria monocytogenes]
gi|22770578|gb|AAN06664.1|AF497236_1 DNA recombinase [Listeria monocytogenes]
gi|22770582|gb|AAN06666.1|AF497238_1 DNA recombinase [Listeria monocytogenes]
gi|22770584|gb|AAN06667.1|AF497239_1 DNA recombinase [Listeria monocytogenes]
gi|22770586|gb|AAN06668.1|AF497240_1 DNA recombinase [Listeria monocytogenes]
gi|22770588|gb|AAN06669.1|AF497241_1 DNA recombinase [Listeria monocytogenes]
gi|46880894|gb|AAT04192.1| recA protein [Listeria monocytogenes serotype 4b str. F2365]
gi|47018231|gb|EAL08998.1| recA protein [Listeria monocytogenes str. 4b H7858]
gi|217333725|gb|ACK39519.1| protein RecA [Listeria monocytogenes HCC23]
gi|225876461|emb|CAS05170.1| Recombination protein recA [Listeria monocytogenes serotype 4b str.
CLIP 80459]
gi|290556011|gb|EFD89564.1| recA protein [Listeria monocytogenes FSL J2-071]
gi|293584142|gb|EFF96174.1| recombinase A [Listeria monocytogenes HPB2262]
gi|293593781|gb|EFG01542.1| recA protein [Listeria monocytogenes FSL J1-194]
gi|300513527|gb|EFK40598.1| recA protein [Listeria monocytogenes FSL N1-017]
gi|307570980|emb|CAR84159.1| recombination protein [Listeria monocytogenes L99]
gi|313608863|gb|EFR84641.1| protein RecA [Listeria monocytogenes FSL F2-208]
gi|332311839|gb|EGJ24934.1| Protein recA [Listeria monocytogenes str. Scott A]
gi|336023352|gb|AEH92489.1| DNA recombination protein [Listeria monocytogenes M7]
gi|378753093|gb|EHY63678.1| RecA protein [Listeria monocytogenes FSL J1-208]
gi|384390895|gb|AFH79965.1| recombinase A [Listeria monocytogenes 07PF0776]
gi|404218942|emb|CBY70306.1| recombination protein [Listeria monocytogenes ATCC 19117]
gi|404221818|emb|CBY73181.1| recombination protein [Listeria monocytogenes SLCC2378]
gi|404224729|emb|CBY76091.1| recombination protein [Listeria monocytogenes SLCC2540]
gi|404227589|emb|CBY48994.1| recombination protein [Listeria monocytogenes SLCC2755]
gi|404241985|emb|CBY63385.1| recombination protein [Listeria monocytogenes SLCC2376]
gi|404245748|emb|CBY03973.1| recombination protein [Listeria monocytogenes serotype 7 str.
SLCC2482]
gi|406361201|emb|CBY67474.1| recombination protein [Listeria monocytogenes L312]
gi|424013458|emb|CCO63998.1| Protein RecA [Listeria monocytogenes serotype 4b str. LL195]
Length = 348
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/354 (51%), Positives = 262/354 (74%), Gaps = 12/354 (3%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
M+ + AL QAL QI FGKGSIM LG + +++ +S+GS ALDIALG GG P+GR+
Sbjct: 1 MNDRQAALDQALKQIEKQFGKGSIMKLGEH-SDQNISTISSGSLALDIALGVGGYPRGRI 59
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+E+YGPE+SGKTT+ALH IAE Q QGG FIDAEHALDP+ A+ +GV + LLL+QPD
Sbjct: 60 IEVYGPESSGKTTVALHAIAEVQAQGGTAAFIDAEHALDPAYAKNLGVNIDELLLSQPDT 119
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + + L+RSG+VD++V+DSVAALVP+ E++GEMGDAH+ +QARLMSQALRKLS
Sbjct: 120 GEQALEIAEALVRSGAVDMLVIDSVAALVPRAEIEGEMGDAHVGLQARLMSQALRKLSGV 179
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
++ S+TI IFINQ+R K+ FG P E+T GG ALKFY++VRL ++R +K+G + +G
Sbjct: 180 INKSKTIAIFINQIREKVGVM-FGNP-EITPGGRALKFYSTVRLEVRRAEQLKQGTDVMG 237
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF- 299
++ +K+VKNK+APPF+ A+ ++ +G+GISRE E++D+A + +K+G+ ++Y +
Sbjct: 238 NKTKIKVVKNKVAPPFRIAEVDIMYGEGISREGELVDMAAEVDVINKSGSWYSYKEERIG 297
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVD--HKEPQTAVTDEDSTEETVSTI 351
+G+E KQ+L E+ +R+E+ ++RE+ +D +KEP D EET+S +
Sbjct: 298 QGRENAKQYLKEHTDIRDEISKRVREEYEIDGSNKEPL------DEGEETLSLL 345
>gi|2460018|gb|AAC38154.1| RecA [Xanthomonas oryzae pv. oryzae]
Length = 344
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 193/340 (56%), Positives = 243/340 (71%), Gaps = 3/340 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGS+M +G V V V+ TGS LDIALGTGGLPKGRVVEI
Sbjct: 5 KKRALAAALSQIEKQFGKGSVMRMGDRVI-EAVEVIPTGSLMLDIALGTGGLPKGRVVEI 63
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L IA+ Q+ GG FIDAEHALDP A +GV ++LLL+QPD GEQ
Sbjct: 64 YGPESSGKTTLTLQAIAQCQKLGGTAAFIDAEHALDPVYAAKLGVNVDDLLLSQPDTGEQ 123
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RS SVD+VV+DSVAAL PK E++GEMGD +QARLMSQALRKL+ ++
Sbjct: 124 ALEIADMLVRSSSVDIVVIDSVAALTPKAEIEGEMGDQLPGLQARLMSQALRKLTGNIKR 183
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T+++FINQ+R K+ G EVT GGNALKFYASVRL+I+RIG +KKG+E IG+Q
Sbjct: 184 SNTLVVFINQLRMKIGVMMPGQSPEVTTGGNALKFYASVRLDIRRIGAIKKGDEIIGNQT 243
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYND-RNFRGK 302
+K+VKNKLAPPFK E+ +G+GISRE E+ID+A++ K KAGA ++Y D R +GK
Sbjct: 244 KIKVVKNKLAPPFKQVVTEILYGEGISREGELIDMAVEAKLVEKAGAWYSYGDERIGQGK 303
Query: 303 EAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDED 342
+ + +L +N V L +LREK + P+ A DE+
Sbjct: 304 DNARTYLRDNPQVAVRLEAELREKF-QPAEAPREAGDDEE 342
>gi|410458677|ref|ZP_11312434.1| recombinase A [Bacillus azotoformans LMG 9581]
gi|409931027|gb|EKN68015.1| recombinase A [Bacillus azotoformans LMG 9581]
Length = 347
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 185/332 (55%), Positives = 246/332 (74%), Gaps = 9/332 (2%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
MS + AL++AL I FGKGSIM LG R + VS+GS ALDIALG GG P+GR+
Sbjct: 1 MSDRKAALERALKDIEKQFGKGSIMKLGEQ-AERKLATVSSGSLALDIALGVGGYPRGRI 59
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+E+YGPE+SGKTT+ LH IAE Q+ GG FIDAEHALDP AE +GV + LLL+QPD
Sbjct: 60 IEVYGPESSGKTTVTLHAIAEVQKLGGTAAFIDAEHALDPVYAEKLGVNIDELLLSQPDT 119
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + D L+RSG+VD++V+DSVAALVPK E++GEMGD+HM +QARLMSQALRKLS +
Sbjct: 120 GEQALEIADALVRSGAVDIIVIDSVAALVPKAEIEGEMGDSHMGLQARLMSQALRKLSGA 179
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
++ S+TI IFINQVR K+ FG P E T GG ALKFY+S+RL ++R +K+G E +G
Sbjct: 180 INKSKTIAIFINQVREKIGVM-FGNP-ETTTGGRALKFYSSIRLEVRRAETIKQGNEMVG 237
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF- 299
S+ +K+VKNK+APPFKTA+ ++ +G+GI+RE E+ID+A + K+GA ++YN+
Sbjct: 238 SKTKIKVVKNKVAPPFKTAEVDIMYGEGITREGELIDIASELDIIQKSGAWYSYNEERLG 297
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVDH 331
+G+E KQFL EN +L +++R+ LV H
Sbjct: 298 QGRENAKQFLKEN----PDLYVEIRD-LVRAH 324
>gi|375002549|ref|ZP_09726889.1| protein RecA [Salmonella enterica subsp. enterica serovar Infantis
str. SARB27]
gi|353077237|gb|EHB42997.1| protein RecA [Salmonella enterica subsp. enterica serovar Infantis
str. SARB27]
Length = 358
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/347 (55%), Positives = 245/347 (70%), Gaps = 5/347 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 11 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 69
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A +GV +NLL +QPD GE
Sbjct: 70 IYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGE 129
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV+VVDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 130 QALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 189
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+G+ +GS+
Sbjct: 190 QSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKEGDNVVGSE 247
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +K K KAGA ++YN +G
Sbjct: 248 TRVKVVKNKIAAPFKQAEFQILYGEGINFYGELVDLGVKEKLIEKAGAWYSYNGEKIGQG 307
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHK-EPQTAVTDEDSTEET 347
K +L EN + +E+ ++RE L+ + P AV D + ET
Sbjct: 308 KANATTWLKENPATAKEIEKRVRELLLSNQNATPDFAVDDSEGVAET 354
>gi|318061001|ref|ZP_07979722.1| recombinase A [Streptomyces sp. SA3_actG]
gi|318079874|ref|ZP_07987206.1| recombinase A [Streptomyces sp. SA3_actF]
Length = 378
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 189/353 (53%), Positives = 259/353 (73%), Gaps = 8/353 (2%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLG-RSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
+ ++ AL AL QI FGKG++M +G R P + V+ TGS ALDIALG GG+P+GRV
Sbjct: 4 TDREKALDAALAQIERQFGKGAVMRMGERPNEP--IEVIPTGSTALDIALGVGGIPRGRV 61
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
VE+YGPE+SGKTTL LH +A AQ+ GG FIDAEHALDP A +GV +NL+L+QPD
Sbjct: 62 VEVYGPESSGKTTLTLHAVANAQKAGGAVAFIDAEHALDPEYARKLGVDVDNLILSQPDN 121
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL +VD L+RSG++D++V+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ +
Sbjct: 122 GEQALEIVDMLVRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITSA 181
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
L+ S+T IFINQ+R K+ FG P E T GG ALKFYASVR++I+RI +K G + +G
Sbjct: 182 LNQSKTTAIFINQLREKIGVM-FGSP-ETTTGGRALKFYASVRIDIRRIETLKDGTDAVG 239
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNF 299
++ KIVKNK+APPFK A+F++ +G+GISRE +ID+ ++H F KAGA +TY D+
Sbjct: 240 NRTRCKIVKNKVAPPFKQAEFDILYGQGISREGGLIDMGVEHGFVRKAGAWYTYEGDQLG 299
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDED--STEETVST 350
+GKE + FL +N + +E+ K++EKL V K +T + + +TEET T
Sbjct: 300 QGKENARNFLKDNPDLADEIERKIKEKLGVGVKPEKTEKPEGEPAATEETAET 352
>gi|296112538|ref|YP_003626476.1| recombination protein RecA [Moraxella catarrhalis RH4]
gi|416216870|ref|ZP_11623904.1| recombinase A [Moraxella catarrhalis 7169]
gi|416229548|ref|ZP_11628086.1| recombinase A [Moraxella catarrhalis 46P47B1]
gi|416240237|ref|ZP_11632301.1| recombinase A [Moraxella catarrhalis BC1]
gi|416242132|ref|ZP_11633266.1| recombinase A [Moraxella catarrhalis BC7]
gi|416247761|ref|ZP_11635908.1| recombinase A [Moraxella catarrhalis BC8]
gi|416249097|ref|ZP_11636375.1| recombinase A [Moraxella catarrhalis CO72]
gi|421779352|ref|ZP_16215845.1| recombination protein RecA [Moraxella catarrhalis RH4]
gi|295920232|gb|ADG60583.1| recombination protein RecA [Moraxella catarrhalis BBH18]
gi|326561307|gb|EGE11665.1| recombinase A [Moraxella catarrhalis 7169]
gi|326562548|gb|EGE12863.1| recombinase A [Moraxella catarrhalis 46P47B1]
gi|326566176|gb|EGE16330.1| recombinase A [Moraxella catarrhalis BC1]
gi|326569092|gb|EGE19155.1| recombinase A [Moraxella catarrhalis BC8]
gi|326571693|gb|EGE21708.1| recombinase A [Moraxella catarrhalis BC7]
gi|326576322|gb|EGE26232.1| recombinase A [Moraxella catarrhalis CO72]
gi|407813492|gb|EKF84273.1| recombination protein RecA [Moraxella catarrhalis RH4]
Length = 349
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 187/347 (53%), Positives = 250/347 (72%), Gaps = 9/347 (2%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K+ AL+ AL QI FGK +IM LG V VVSTGS LDIALG GGLPKGR++E
Sbjct: 4 NKEKALKAALAQIEKQFGKNTIMHLGDETAKLDVDVVSTGSLGLDIALGIGGLPKGRIIE 63
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
I+GPE+SGKTTL L IAE Q+QGG C FIDAEHALDP A+ +GV ++LL++QPD GE
Sbjct: 64 IFGPESSGKTTLTLQTIAECQKQGGTCAFIDAEHALDPIYAKKLGVNIDDLLVSQPDNGE 123
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L+RSG++D++VVDSVAAL PK E++GEMGD+HM +QARLMSQALRK++ +
Sbjct: 124 QALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAK 183
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK G+E IGS+
Sbjct: 184 RSNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSVKDGDEIIGSE 241
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK++KNK+APPF+ +F++ +G+GI+R E+IDL + K+GA ++Y D +G
Sbjct: 242 TRVKVIKNKMAPPFRQTEFQIMYGEGINRLGEVIDLGVDIGAVGKSGAWYSYGDGKIGQG 301
Query: 302 KEAFKQFLVENESVREELVIKLRE-KL-----VVDHKEPQTAVTDED 342
K ++L EN ++ E+ K+RE KL +V+ EP+ + D++
Sbjct: 302 KANTVKYLQENPAIASEIEAKVRESKLATVTPIVESDEPEEHLEDDN 348
>gi|302522274|ref|ZP_07274616.1| recA protein [Streptomyces sp. SPB78]
gi|302431169|gb|EFL02985.1| recA protein [Streptomyces sp. SPB78]
Length = 378
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 189/353 (53%), Positives = 259/353 (73%), Gaps = 8/353 (2%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLG-RSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
+ ++ AL AL QI FGKG++M +G R P + V+ TGS ALDIALG GG+P+GRV
Sbjct: 4 TDREKALDAALAQIERQFGKGAVMRMGERPNEP--IEVIPTGSTALDIALGVGGIPRGRV 61
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
VE+YGPE+SGKTTL LH +A AQ+ GG FIDAEHALDP A +GV +NL+L+QPD
Sbjct: 62 VEVYGPESSGKTTLTLHAVANAQKAGGAVAFIDAEHALDPEYARKLGVDVDNLILSQPDN 121
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL +VD L+RSG++D++V+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ +
Sbjct: 122 GEQALEIVDMLVRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITSA 181
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
L+ S+T IFINQ+R K+ FG P E T GG ALKFYASVR++I+RI +K G + +G
Sbjct: 182 LNQSKTTAIFINQLREKIGVM-FGSP-ETTTGGRALKFYASVRIDIRRIETLKDGTDAVG 239
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNF 299
++ KIVKNK+APPFK A+F++ +G+GISRE +ID+ ++H F KAGA +TY D+
Sbjct: 240 NRTRCKIVKNKVAPPFKQAEFDILYGQGISREGGLIDMGVEHGFVRKAGAWYTYEGDQLG 299
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDED--STEETVST 350
+GKE + FL +N + +E+ K++EKL V K +T + + +TEET T
Sbjct: 300 QGKENARNFLKDNPDLADEIERKIKEKLGVGVKPEKTEKPEGEPAATEETAET 352
>gi|375110987|ref|ZP_09757201.1| recombinase A [Alishewanella jeotgali KCTC 22429]
gi|374569019|gb|EHR40188.1| recombinase A [Alishewanella jeotgali KCTC 22429]
Length = 348
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 191/341 (56%), Positives = 245/341 (71%), Gaps = 7/341 (2%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG S T + VSTGS LDIALG GGLP GR+VE
Sbjct: 4 NKQKALSAALSQIERQFGKGSIMRLGDS-TALDIEAVSTGSLGLDIALGIGGLPYGRIVE 62
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIAEAQR G C FIDAEHALDP A+ +GV + LL++QPD GE
Sbjct: 63 IYGPESSGKTTLTLQVIAEAQRSGKTCAFIDAEHALDPVYAKKLGVDVDKLLVSQPDTGE 122
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L+RS +VDVV+VDSVAAL PK E++G+MGD+HM +QARLMSQALRKL+ ++
Sbjct: 123 QALEICDMLVRSAAVDVVIVDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTANIK 182
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+ IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+G+E G++
Sbjct: 183 RSNTLCIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGSVKEGDEITGNE 240
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK+VKNK+APPFK A+F +++G GI++ E+IDL ++ K+GA + Y +G
Sbjct: 241 TRVKVVKNKVAPPFKQAEFIIQYGAGINKLGELIDLGVQQGLVDKSGAWYAYQGNKIGQG 300
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDED 342
K +FL EN ++ +E+ +LR +L++ +P AV +D
Sbjct: 301 KANAMKFLQENTAIADEIEKELRARLLL---KPGEAVATDD 338
>gi|154509073|ref|ZP_02044715.1| hypothetical protein ACTODO_01590 [Actinomyces odontolyticus ATCC
17982]
gi|153798707|gb|EDN81127.1| RecA protein [Actinomyces odontolyticus ATCC 17982]
Length = 363
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/354 (53%), Positives = 253/354 (71%), Gaps = 10/354 (2%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVV 61
+ ++ AL+ AL QI FGKGS+M LG P V V+ TGS ALD+ALG GGLP+GRV+
Sbjct: 14 NDRNKALEVALSQIDKQFGKGSVMRLGDDNRP-PVQVIPTGSLALDVALGIGGLPRGRVI 72
Query: 62 EIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCG 121
E+YGPE+SGKTT+ALH +A AQ+ GG FIDAEHALDP A +GV T++LL++QPD G
Sbjct: 73 EVYGPESSGKTTVALHAVANAQKAGGNAAFIDAEHALDPVYARALGVDTDSLLVSQPDTG 132
Query: 122 EQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSL 181
EQAL + D LIRSG +D++V+DSVAALVPK E++GEMGD+H+ +QARLMSQALRK++ +L
Sbjct: 133 EQALEIADMLIRSGGIDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITGAL 192
Query: 182 SLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGS 241
S + T IFINQ+R K+ F FG P E T GG ALKFYASVR++++RI +K+ +G+
Sbjct: 193 SATGTTAIFINQLREKIGVF-FGSP-ETTTGGKALKFYASVRIDVRRIETLKEAGAPVGN 250
Query: 242 QIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-R 300
+ K+VKNK+APPFK A+F++ +GKGISRE IID+ ++ K+G+ FTY D +
Sbjct: 251 RTRAKVVKNKMAPPFKQAEFDIVYGKGISREGSIIDMGVEAGIVRKSGSWFTYGDDQLGQ 310
Query: 301 GKEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETVSTISPD 354
GKE +QFLV+N EL ++ +K++V +T D D + V I PD
Sbjct: 311 GKENVRQFLVDN----PELANEIEQKILVSLGIGET--PDPDQASQDVPDIDPD 358
>gi|357030598|ref|ZP_09092542.1| recombinase A [Gluconobacter morbifer G707]
gi|356415292|gb|EHH68935.1| recombinase A [Gluconobacter morbifer G707]
Length = 345
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 185/345 (53%), Positives = 254/345 (73%), Gaps = 6/345 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPR-HVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL+ AL QI +FGKGSIM +G+ P+ V+STGS LDIALG GG+P+GR+VE
Sbjct: 3 KTKALEGALSQIERAFGKGSIMRMGQR--PKEQADVISTGSLGLDIALGIGGMPRGRIVE 60
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTLALHV+AEAQ++GG FIDAEHALDP A +GV ++LLL+QPD GE
Sbjct: 61 IYGPESSGKTTLALHVLAEAQKKGGTVAFIDAEHALDPGYARKLGVNIDDLLLSQPDAGE 120
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + DTL+RSG+VDV+VVDSVAALVP+ EL+G+MGD+H+ + ARLMSQALRKL+ +++
Sbjct: 121 QALEIADTLVRSGAVDVLVVDSVAALVPRAELEGDMGDSHVGLHARLMSQALRKLTGTVA 180
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T++IF+NQ+R K+ FG P E T GGNALKFY+S+RL+I+RIG +K +E +G+Q
Sbjct: 181 RSNTLVIFLNQIRMKIGVM-FGNP-ETTTGGNALKFYSSIRLDIRRIGSIKDKDEVVGNQ 238
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK+VKNK+APPF+ +F++ +G+GIS+ E++DL +K K+GA F+++ + +G
Sbjct: 239 TRVKVVKNKMAPPFRQVEFDIMYGEGISKMGELLDLGVKGNIVEKSGAWFSFDSQRIGQG 298
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEE 346
+E KQFL E+ + E+ ++R V T ED T +
Sbjct: 299 RENAKQFLREHPEMANEIERRIRSDAGVLADALMTGPEAEDDTSD 343
>gi|398345389|ref|ZP_10530092.1| recombinase A [Leptospira inadai serovar Lyme str. 10]
Length = 393
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 177/313 (56%), Positives = 239/313 (76%), Gaps = 3/313 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K +A+ QA+ QI FGKGSIM LG + +PV+ TGS LDIALG GG P GR+VEI
Sbjct: 45 KKMAIDQAMTQIEKQFGKGSIMRLGAASATNVMPVIPTGSLDLDIALGIGGYPLGRIVEI 104
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L IAEAQ++GG FIDAEHALDPS A+ +GV E LL++QPD GE+
Sbjct: 105 YGPESSGKTTLTLAAIAEAQKRGGVAAFIDAEHALDPSYAKKLGVNLEELLVSQPDNGEE 164
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + ++L+RS ++D++VVDSVAALVPK E++G+MGDAHM +QARLMSQALRKL+ ++S
Sbjct: 165 ALEICESLVRSNAIDIIVVDSVAALVPKAEIEGDMGDAHMGLQARLMSQALRKLTGTISK 224
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+T+++FINQ+R K+ FG P E T GGNALKFY+S+RL+I++I +K+ EE G+++
Sbjct: 225 SRTVVVFINQIRMKIGVM-FGSP-ETTTGGNALKFYSSIRLDIRKIETLKEKEEATGNRV 282
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK APPF+ A+F++ + GISRES ++DL +KH SK+GA ++YN +GK
Sbjct: 283 RVKVVKNKTAPPFRQAEFDIIYNTGISRESSLVDLGVKHDIISKSGAWYSYNTEKIGQGK 342
Query: 303 EAFKQFLVENESV 315
EA K++L N +
Sbjct: 343 EAAKEYLKANPEI 355
>gi|71361898|gb|AAZ30056.1| recombinant protein A [Moraxella catarrhalis O35E]
Length = 349
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 187/347 (53%), Positives = 250/347 (72%), Gaps = 9/347 (2%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K+ AL+ AL QI FGK +IM LG V VVSTGS LDIALG GGLPKGR++E
Sbjct: 4 NKEKALKAALAQIEKQFGKNTIMHLGDETAKLDVDVVSTGSLGLDIALGIGGLPKGRIIE 63
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
I+GPE+SGKTTL L IAE Q+QGG C FIDAEHALDP A+ +GV ++LL++QPD GE
Sbjct: 64 IFGPESSGKTTLTLQTIAECQKQGGTCAFIDAEHALDPIYAKKLGVNIDDLLVSQPDNGE 123
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L+RSG++D++VVDSVAAL PK E++GEMGD+HM +QARLMSQALRK++ +
Sbjct: 124 QALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAK 183
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK G+E IGS+
Sbjct: 184 RSNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSVKDGDEIIGSE 241
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK++KNK+APPF+ +F++ +G+GI+R E+IDL + K+GA ++Y D +G
Sbjct: 242 TRVKVIKNKMAPPFRQTEFQIMYGEGINRLGEVIDLGVDIGAVGKSGAWYSYGDGKIGQG 301
Query: 302 KEAFKQFLVENESVREELVIKLRE-KL-----VVDHKEPQTAVTDED 342
K ++L EN ++ E+ K+RE KL +V+ EP+ + D++
Sbjct: 302 KANTVKYLQENPAIASEIEAKVREIKLATVTPIVESDEPEEHLEDDN 348
>gi|374291978|ref|YP_005039013.1| Recombinase A (recA) [Azospirillum lipoferum 4B]
gi|384872617|sp|P62209.2|RECA_AZOL4 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|357423917|emb|CBS86779.1| Recombinase A (recA) [Azospirillum lipoferum 4B]
Length = 359
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 189/346 (54%), Positives = 246/346 (71%), Gaps = 5/346 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI +FGKGSIM LG V+STGS LDIALG GGLPKGR+VEI
Sbjct: 16 KQKALDAALSQIERAFGKGSIMKLGARENLVETEVISTGSLGLDIALGIGGLPKGRIVEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH IA+AQ+ GG C F+DAEHALDPS A +GV + LL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALHAIAQAQKAGGTCAFVDAEHALDPSYARKLGVNIDELLISQPDAGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+VVDSVAALVP+ EL+GEMGD+H+ + ARLMSQALRKL+ S+S
Sbjct: 136 ALEIADTLVRSGAIDVLVVDSVAALVPRAELEGEMGDSHVGLHARLMSQALRKLTGSISK 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K + +G+Q
Sbjct: 196 SNCLVIFINQIRLKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGSIKDRDTVVGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYND-RNFRGK 302
VK+VKNK+APPF+ +F++ +G+G+S+ E++DL ++ K+GA F+Y+ R +G+
Sbjct: 254 RVKVVKNKMAPPFRVVEFDIMYGEGVSKVGELLDLGIQAGVVDKSGAWFSYDGTRIGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK--LVVDHKEPQTAVTDEDSTEE 346
E K +L N + + + K+R LV D E ST E
Sbjct: 314 ENAKTYLRNNPEMADAIEAKIRGNAGLVADAMMGTPEADGEASTPE 359
>gi|451982594|ref|ZP_21930903.1| Recombinase RecA [Nitrospina gracilis 3/211]
gi|451760240|emb|CCQ92201.1| Recombinase RecA [Nitrospina gracilis 3/211]
Length = 360
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 186/345 (53%), Positives = 251/345 (72%), Gaps = 5/345 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K+ AL A QI FGKGSIM LG+ + V + TGS +LD LG GG+P+GRV+EI
Sbjct: 7 KEKALDLAFSQIEKQFGKGSIMKLGQG-EAQKVATIPTGSLSLDAVLGIGGVPRGRVIEI 65
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPEASGKT+L LH+IAEAQ+ GG FIDAEHALDP A +GV E+LLL+QPD GEQ
Sbjct: 66 YGPEASGKTSLTLHIIAEAQKAGGVAAFIDAEHALDPQYARNLGVNLEDLLLSQPDTGEQ 125
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
L + + L+RSG+VDV+V+DSVAALVPK ELDGEMGD+HM +QARLMSQA+RKL+ ++
Sbjct: 126 TLEIAEVLVRSGAVDVIVIDSVAALVPKAELDGEMGDSHMGLQARLMSQAMRKLTGVINK 185
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+T LIFINQ+R K+ FG P E T GGNALKFY+SVRL+I+RI +K G++ IG++
Sbjct: 186 SRTALIFINQIRMKIGVM-FGSP-ETTTGGNALKFYSSVRLDIRRISALKDGDKVIGNRT 243
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYND-RNFRGK 302
VK+VKNKLAPPF+ +F++ +GKGISR +++DL ++++ K+G F++ D R +G+
Sbjct: 244 RVKVVKNKLAPPFRECEFDIIYGKGISRYGDLLDLGVQNEIIQKSGTWFSFGDERIGQGR 303
Query: 303 EAFKQFLVENESVREELVIKLREKLVVD-HKEPQTAVTDEDSTEE 346
E K FL EN + +++ ++R+KL + H P T + + EE
Sbjct: 304 ENSKNFLEENPDIAQKIETQIRQKLDLPVHGAPPTENSGNNGGEE 348
>gi|62288901|sp|Q9XBC1.3|RECA_RHOPA RecName: Full=Protein RecA; AltName: Full=Recombinase A
Length = 349
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 186/349 (53%), Positives = 252/349 (72%), Gaps = 8/349 (2%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGS+M LG++ + +S+GS LDIALG GGLPKGR+VEI
Sbjct: 3 KSKALSAALSQIERQFGKGSVMRLGKNDRSMDIETISSGSLGLDIALGVGGLPKGRIVEI 62
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH +AEAQ++GG C F+DAEHALDP A +GV ++LL++QPD GEQ
Sbjct: 63 YGPESSGKTTLALHCVAEAQKKGGICAFVDAEHALDPVYARKLGVNVDDLLISQPDHGEQ 122
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV++VDSVAALVP+ EL+GEMGDA +QARLMSQALRKL+ S++
Sbjct: 123 ALEIADTLVRSGAIDVLIVDSVAALVPRAELEGEMGDALPGLQARLMSQALRKLTASINK 182
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ +G P E T GGNALKFYASVRL+I+RIG +K+ +E +G+Q
Sbjct: 183 SNTMVIFINQIRMKIGVM-YGSP-ETTTGGNALKFYASVRLDIRRIGQIKERDEVVGNQT 240
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G+G+S+ EI+DL +K K+GA F+++ + +G+
Sbjct: 241 RVKVVKNKLAPPFKQVEFDIMYGEGVSKMGEILDLGVKAGIVEKSGAWFSHDSQRLGQGR 300
Query: 303 EAFKQFLVENE--SVREELVIKLREKLVVDH---KEPQTAVTDEDSTEE 346
E K FL N + + E I+ L+ + P++ E+ EE
Sbjct: 301 ENAKAFLKANPDMTAKIEAAIRQNSGLIAEQILAGSPESDADGEEPMEE 349
>gi|415729569|ref|ZP_11472595.1| recombinase A [Gardnerella vaginalis 6119V5]
gi|388064603|gb|EIK87137.1| recombinase A [Gardnerella vaginalis 6119V5]
Length = 380
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/336 (54%), Positives = 248/336 (73%), Gaps = 4/336 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
++ AL+ AL + +GKGS M LG + V V+ TGS ALD ALG GG+P+GR+VE
Sbjct: 23 RRQAALETALANVERQYGKGSAMRLGDRPM-QDVEVIPTGSIALDTALGIGGVPRGRIVE 81
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
+YGPE+SGKTTLALH++A AQ+ GG FIDAEHALDP A +GV T+ L+++QPD GE
Sbjct: 82 VYGPESSGKTTLALHIVANAQKNGGVAAFIDAEHALDPVYARKLGVDTDALIVSQPDNGE 141
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D LIRSG++DV+VVDSVAALVPK E+DG+MGD+H+ +QARLMSQALRK++ +LS
Sbjct: 142 QALEIADMLIRSGALDVIVVDSVAALVPKAEIDGDMGDSHVGLQARLMSQALRKMTGALS 201
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ T IFINQ+R K+ F FG P E T GG ALKFYASVR++I+R+ +K+GEE IG++
Sbjct: 202 QAGTTAIFINQLREKIGVF-FGNP-ETTTGGKALKFYASVRMDIRRVSTIKEGEEAIGNR 259
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VKIVKNK+APPFKTA+F++ +G+GIS E +ID+ L+ K+G+ FTY +G
Sbjct: 260 TKVKIVKNKMAPPFKTAEFDVLYGEGISTEGSVIDMGLQADVIKKSGSWFTYEGEQLGQG 319
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTA 337
+E ++FL +N ++ EE+ K++ L + H + Q A
Sbjct: 320 RENVRKFLKDNPAITEEISEKIKAALGLMHPDDQFA 355
>gi|730487|sp|P41054.1|RECA_STRAM RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|511133|emb|CAA82979.1| RecA [Streptomyces ambofaciens]
Length = 372
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/341 (53%), Positives = 254/341 (74%), Gaps = 6/341 (1%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLG-RSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
+ ++ AL AL QI FGKG++M +G RS P + V+ TGS ALD+ALG GGLP+GRV
Sbjct: 4 TDREKALDAALAQIERQFGKGAVMRMGDRSKEP--IEVIPTGSTALDVALGVGGLPRGRV 61
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+E+YGPE+SGKTTL LH +A AQ+ GG F+DAEHALDP A+ +GV +NL+L+QPD
Sbjct: 62 IEVYGPESSGKTTLTLHAVANAQKAGGQVAFVDAEHALDPEYAQKLGVDIDNLILSQPDN 121
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL +VD L+RSG++D++V+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ +
Sbjct: 122 GEQALEIVDMLVRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITSA 181
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
L+ S+T IFINQ+R K+ FG P E T GG ALKFYASVRL+I+RI +K G + +G
Sbjct: 182 LNQSKTTAIFINQLREKIGVM-FGSP-ETTTGGRALKFYASVRLDIRRIETLKDGTDAVG 239
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNF 299
++ VK+VKNK+APPFK A+F++ +G+GISRE +ID+ ++H F KAGA +TY D+
Sbjct: 240 NRTRVKVVKNKVAPPFKQAEFDILYGQGISREGGLIDMGVEHGFVRKAGAWYTYEGDQLG 299
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTD 340
+GKE + FL +N + E+ K++EKL V + + T+
Sbjct: 300 QGKENARNFLKDNPDLANEIEKKIKEKLGVGVRPEEPTATE 340
>gi|408528884|emb|CCK27058.1| Protein RecA [Streptomyces davawensis JCM 4913]
Length = 372
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/336 (54%), Positives = 252/336 (75%), Gaps = 6/336 (1%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLG-RSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
+ ++ AL AL QI FGKG++M +G RS+ P + V+ TGS ALD+ALG GGLP+GRV
Sbjct: 4 TDREKALDAALAQIERQFGKGAVMRMGERSMEP--IEVIPTGSTALDVALGVGGLPRGRV 61
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
VEIYGPE+SGKTTL LH +A AQ+ GG F+DAEHALDP A+ +GV +NL+L+QPD
Sbjct: 62 VEIYGPESSGKTTLTLHAVANAQKAGGQVAFVDAEHALDPEYAKKLGVDIDNLILSQPDN 121
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL +VD L+RSG++D++V+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ +
Sbjct: 122 GEQALEIVDMLVRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITSA 181
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
L+ S+T IFINQ+R K+ FG P E T GG ALKFYASVR++I+RI +K G E +G
Sbjct: 182 LNQSKTTAIFINQLREKIGVM-FGSP-ETTTGGRALKFYASVRIDIRRIETLKDGTEAVG 239
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNF 299
++ K+VKNK+APPFK A+F++ +G+GISRE +ID+ ++H F KAGA +TY D+
Sbjct: 240 NRTRCKVVKNKVAPPFKQAEFDILYGQGISREGGLIDMGVEHGFVRKAGAWYTYEGDQLG 299
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVDHKEPQ 335
+GKE + FL +N + E+ K++EKL V + Q
Sbjct: 300 QGKENARNFLKDNPDLANEIEKKIKEKLGVGVRPEQ 335
>gi|109453402|gb|ABG34181.1| RecA [Salmonella enterica subsp. salamae]
gi|109453404|gb|ABG34182.1| RecA [Salmonella enterica subsp. salamae]
gi|109453406|gb|ABG34183.1| RecA [Salmonella enterica subsp. salamae]
gi|109453408|gb|ABG34184.1| RecA [Salmonella enterica subsp. salamae]
gi|109453410|gb|ABG34185.1| RecA [Salmonella enterica subsp. salamae]
gi|109453412|gb|ABG34186.1| RecA [Salmonella enterica subsp. salamae]
gi|109453414|gb|ABG34187.1| RecA [Salmonella enterica subsp. salamae]
gi|109453416|gb|ABG34188.1| RecA [Salmonella enterica subsp. salamae]
gi|109453418|gb|ABG34189.1| RecA [Salmonella enterica subsp. salamae]
gi|109453420|gb|ABG34190.1| RecA [Salmonella enterica subsp. salamae]
gi|109453442|gb|ABG34201.1| RecA [Salmonella enterica subsp. diarizonae]
gi|109453444|gb|ABG34202.1| RecA [Salmonella enterica subsp. diarizonae]
gi|109453446|gb|ABG34203.1| RecA [Salmonella enterica subsp. diarizonae]
gi|109453448|gb|ABG34204.1| RecA [Salmonella enterica subsp. diarizonae]
gi|109453450|gb|ABG34205.1| RecA [Salmonella enterica subsp. diarizonae]
gi|109453456|gb|ABG34208.1| RecA [Salmonella enterica subsp. diarizonae]
gi|109453458|gb|ABG34209.1| RecA [Salmonella enterica subsp. diarizonae]
gi|109453460|gb|ABG34210.1| RecA [Salmonella enterica subsp. diarizonae]
gi|109453462|gb|ABG34211.1| RecA [Salmonella enterica subsp. diarizonae]
Length = 353
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/347 (55%), Positives = 245/347 (70%), Gaps = 5/347 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV+VVDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+G+ +GS+
Sbjct: 185 QSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKEGDNVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +K K KAGA ++YN +G
Sbjct: 243 TRVKVVKNKIAAPFKQAEFQILYGEGINFYGELVDLGVKEKLIEKAGAWYSYNGEKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHK-EPQTAVTDEDSTEET 347
K +L EN + +E+ K+RE L+ + P +V D + ET
Sbjct: 303 KANATTWLKENPATAKEIEKKVRELLLSNQNATPDFSVDDSEGVAET 349
>gi|302385103|ref|YP_003820925.1| recA protein [Clostridium saccharolyticum WM1]
gi|302195731|gb|ADL03302.1| recA protein [Clostridium saccharolyticum WM1]
Length = 363
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 189/340 (55%), Positives = 256/340 (75%), Gaps = 6/340 (1%)
Query: 1 MSKKDL--ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKG 58
M+K D AL AL QI ++GKGS+M LG S T +V V TG+ +LDIALG GG+PKG
Sbjct: 1 MNKDDKLKALDAALTQIEKAYGKGSVMKLGDSGTNMNVETVPTGALSLDIALGLGGIPKG 60
Query: 59 RVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQP 118
RVVEIYGPE+SGKTT+ALH+IAE Q++GG FIDAEHALDP A++IGV +NL ++QP
Sbjct: 61 RVVEIYGPESSGKTTVALHMIAEVQKRGGIAGFIDAEHALDPVYAKSIGVDIDNLYISQP 120
Query: 119 DCGEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLS 178
D GEQAL + +T++RSG+VD+V+VDSVAALVPK E++G+MGD+H+ +QARLMSQALRKL+
Sbjct: 121 DNGEQALEITETMVRSGAVDIVIVDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKLT 180
Query: 179 HSLSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEET 238
+S S I++FINQ+R K+ FG P E T GG ALKFYASVRL+I++I +K+G +
Sbjct: 181 AIISKSNCIVLFINQLREKVGVM-FGSP-ETTTGGRALKFYASVRLDIRKIETLKQGGDM 238
Query: 239 IGSQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRN 298
+G+++ VK+VKNK+APPFK A+F++ FGKGIS+E +I+DLA+K K+GA F YN+
Sbjct: 239 VGNRVRVKVVKNKIAPPFKEAEFDIMFGKGISKEGDILDLAVKENIVEKSGAWFAYNNIK 298
Query: 299 F-RGKEAFKQFLVENESVREELVIKLREKLVVDHKEPQTA 337
+G+E K +L +N + E+ K+R K + H+E A
Sbjct: 299 IGQGRENAKTYLQDNPAACMEIENKVRVKYGL-HEEGSAA 337
>gi|445431866|ref|ZP_21438919.1| RecA protein [Acinetobacter baumannii OIFC021]
gi|444759249|gb|ELW83725.1| RecA protein [Acinetobacter baumannii OIFC021]
Length = 350
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 186/345 (53%), Positives = 246/345 (71%), Gaps = 6/345 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K ALQ AL QI FGK ++M LG + T + V VSTGS LDIALG GGLPKGR++E
Sbjct: 4 NKSKALQAALSQIEKQFGKNTVMRLGDN-TVQAVEAVSTGSLTLDIALGIGGLPKGRIIE 62
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTT+ L IA+ Q+ GG C FIDAEHALDP A +GV +NLL++QPD GE
Sbjct: 63 IYGPESSGKTTMTLQAIAQCQKSGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDNGE 122
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L+RSG++D++VVDSVAAL PK E++GEMGD+HM +QARLMSQALRK++ +
Sbjct: 123 QALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAK 182
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+G+E +GS+
Sbjct: 183 RSNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGQVKEGDEIVGSE 240
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK+VKNK+APPF+ A F++ +GKG ++ E++DLA++ KAGA ++Y +G
Sbjct: 241 TKVKVVKNKMAPPFREAIFQILYGKGTNQLGELVDLAVQQDIVQKAGAWYSYQGNKIGQG 300
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEE 346
K ++ EN+ + EE+ +RE+L+ AV ED EE
Sbjct: 301 KNNVIRYFEENKHIAEEIERNIREQLLTTG--TNGAVQIEDDEEE 343
>gi|16803438|ref|NP_464923.1| recombinase A [Listeria monocytogenes EGD-e]
gi|254827659|ref|ZP_05232346.1| recombination protein recA [Listeria monocytogenes FSL N3-165]
gi|254912073|ref|ZP_05262085.1| DNA recombinase [Listeria monocytogenes J2818]
gi|254936400|ref|ZP_05268097.1| recombination protein recA [Listeria monocytogenes F6900]
gi|284801784|ref|YP_003413649.1| recombinase A [Listeria monocytogenes 08-5578]
gi|284994926|ref|YP_003416694.1| recombinase A [Listeria monocytogenes 08-5923]
gi|386043709|ref|YP_005962514.1| recombinase A [Listeria monocytogenes 10403S]
gi|386047050|ref|YP_005965382.1| recombinase A [Listeria monocytogenes J0161]
gi|386050374|ref|YP_005968365.1| recombination protein recA [Listeria monocytogenes FSL R2-561]
gi|386053651|ref|YP_005971209.1| recombinase A [Listeria monocytogenes Finland 1998]
gi|404283889|ref|YP_006684786.1| recombination protein [Listeria monocytogenes SLCC2372]
gi|404410696|ref|YP_006696284.1| recombination protein [Listeria monocytogenes SLCC5850]
gi|404413476|ref|YP_006699063.1| recombination protein [Listeria monocytogenes SLCC7179]
gi|405758445|ref|YP_006687721.1| recombination protein [Listeria monocytogenes SLCC2479]
gi|403399534|sp|G2JZ14.1|RECA_LISM4 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|403399535|sp|P0DJP0.1|RECA_LISMO RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|7385129|gb|AAF61708.1|AF229031_1 RecA [Listeria monocytogenes]
gi|22770564|gb|AAN06657.1|AF497229_1 DNA recombinase [Listeria monocytogenes]
gi|22770566|gb|AAN06658.1|AF497230_1 DNA recombinase [Listeria monocytogenes]
gi|22770590|gb|AAN06670.1|AF497242_1 DNA recombinase [Listeria monocytogenes]
gi|22770592|gb|AAN06671.1|AF497243_1 DNA recombinase [Listeria monocytogenes]
gi|16410827|emb|CAC99476.1| Recombination protein recA [Listeria monocytogenes EGD-e]
gi|258600038|gb|EEW13363.1| recombination protein recA [Listeria monocytogenes FSL N3-165]
gi|258608992|gb|EEW21600.1| recombination protein recA [Listeria monocytogenes F6900]
gi|284057346|gb|ADB68287.1| recombinase A [Listeria monocytogenes 08-5578]
gi|284060393|gb|ADB71332.1| recombinase A [Listeria monocytogenes 08-5923]
gi|293590041|gb|EFF98375.1| DNA recombinase [Listeria monocytogenes J2818]
gi|345534041|gb|AEO03482.1| RecA protein [Listeria monocytogenes J0161]
gi|345536943|gb|AEO06383.1| RecA protein [Listeria monocytogenes 10403S]
gi|346424220|gb|AEO25745.1| recombination protein recA [Listeria monocytogenes FSL R2-561]
gi|346646302|gb|AEO38927.1| RecA protein [Listeria monocytogenes Finland 1998]
gi|404230522|emb|CBY51926.1| recombination protein [Listeria monocytogenes SLCC5850]
gi|404233391|emb|CBY54794.1| recombination protein [Listeria monocytogenes SLCC2372]
gi|404236327|emb|CBY57729.1| recombination protein [Listeria monocytogenes SLCC2479]
gi|404239175|emb|CBY60576.1| recombination protein [Listeria monocytogenes SLCC7179]
gi|441471076|emb|CCQ20831.1| Protein RecA [Listeria monocytogenes]
gi|441474204|emb|CCQ23958.1| Protein RecA [Listeria monocytogenes N53-1]
Length = 348
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/354 (51%), Positives = 261/354 (73%), Gaps = 12/354 (3%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
M+ + AL QAL QI FGKGSIM LG + +++ +S+GS ALDIALG GG P+GR+
Sbjct: 1 MNDRQAALDQALKQIEKQFGKGSIMKLGEH-SDQNISTISSGSLALDIALGVGGYPRGRI 59
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+E+YGPE+SGKTT+ALH IAE Q QGG FIDAEHALDP+ A+ +GV + LLL+QPD
Sbjct: 60 IEVYGPESSGKTTVALHAIAEVQAQGGTAAFIDAEHALDPAYAKNLGVNIDELLLSQPDT 119
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + + L+RSG+VD++V+DSVAALVP+ E++GEMGDAH+ +QARLMSQALRKLS
Sbjct: 120 GEQALEIAEALVRSGAVDMLVIDSVAALVPRAEIEGEMGDAHVGLQARLMSQALRKLSGV 179
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
++ S+TI IFINQ+R K+ FG P E+T GG ALKFY++VRL ++R +K+G + +G
Sbjct: 180 INKSKTIAIFINQIREKVGVM-FGNP-EITPGGRALKFYSTVRLEVRRAEQLKQGTDVMG 237
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF- 299
++ +K+VKNK+APPF+ A+ ++ +G+GISRE E++D+A + +K+G+ ++Y +
Sbjct: 238 NKTKIKVVKNKVAPPFRIAEVDIMYGEGISREGELVDMAAEVDVINKSGSWYSYKEERIG 297
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVD--HKEPQTAVTDEDSTEETVSTI 351
+G+E KQ+L E+ +R+E+ ++RE+ +D KEP D EET+S +
Sbjct: 298 QGRENAKQYLKEHTDIRDEISKRVREEYEIDGSSKEPL------DEKEETLSLL 345
>gi|258545021|ref|ZP_05705255.1| recombinase A [Cardiobacterium hominis ATCC 15826]
gi|258519719|gb|EEV88578.1| recombinase A [Cardiobacterium hominis ATCC 15826]
Length = 363
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 180/327 (55%), Positives = 242/327 (74%), Gaps = 3/327 (0%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
+++ AL+ L Q+ FGKG++M LG T + +STGS LDIALG GGLP+GR+VE
Sbjct: 8 EQEKALKAVLAQLDKQFGKGTVMRLGDQTTEHDIQAISTGSLGLDIALGIGGLPRGRIVE 67
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL LHVIAEAQ+ GG FIDAEHALDP A +GV T++L + QPD GE
Sbjct: 68 IYGPESSGKTTLTLHVIAEAQKAGGTAAFIDAEHALDPIYARKLGVNTDDLYITQPDTGE 127
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L+RSG+ V+V+DSVAAL PK E++GEMGD+H+ +QARLMSQALRKL+ ++
Sbjct: 128 QALEIADALVRSGAFSVIVIDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIK 187
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+G+E +G+Q
Sbjct: 188 RANTLVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSVKEGDEVLGNQ 245
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRG 301
VK+VKNK++PPFK A+F++ +G+GISR EIIDL + K+GA ++Y +D+ +G
Sbjct: 246 TRVKVVKNKVSPPFKQAEFDVLYGQGISRIGEIIDLGVAIDVIQKSGAWYSYGSDKIGQG 305
Query: 302 KEAFKQFLVENESVREELVIKLREKLV 328
KE + +L E + E+ K+RE +
Sbjct: 306 KEKVRAYLTEKPELAAEIEAKIREHYI 332
>gi|397169657|ref|ZP_10493089.1| recombinase A [Alishewanella aestuarii B11]
gi|396088961|gb|EJI86539.1| recombinase A [Alishewanella aestuarii B11]
Length = 348
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/344 (55%), Positives = 246/344 (71%), Gaps = 7/344 (2%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG S T + VSTGS LDIALG GGLP GR+VE
Sbjct: 4 NKQKALSAALSQIERQFGKGSIMRLGDS-TALDIEAVSTGSLGLDIALGIGGLPYGRIVE 62
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIAEAQR G C FIDAEHALDP A+ +GV + LL++QPD GE
Sbjct: 63 IYGPESSGKTTLTLQVIAEAQRSGKTCAFIDAEHALDPVYAKKLGVDVDKLLVSQPDTGE 122
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L+RS +VDVV+VDSVAAL PK E++G+MGD+HM +QARLMSQALRKL+ ++
Sbjct: 123 QALEICDMLVRSAAVDVVIVDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTANIK 182
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+ IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+G+E G++
Sbjct: 183 RSNTLCIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGSVKEGDEITGNE 240
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK+VKNK+APPFK A+F +++G GI++ E+IDL ++ K+GA + Y +G
Sbjct: 241 TRVKVVKNKVAPPFKQAEFIIQYGAGINKLGELIDLGVQQGLVDKSGAWYAYQGNKIGQG 300
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTE 345
K +FL +N +V +E+ +LR +L++ +P AV +D E
Sbjct: 301 KANAMKFLQDNPAVADEIEKELRARLLL---KPGEAVATDDVME 341
>gi|390934944|ref|YP_006392449.1| protein recA [Thermoanaerobacterium saccharolyticum JW/SL-YS485]
gi|300390225|gb|ADK10925.1| RecA [Thermoanaerobacterium saccharolyticum JW/SL-YS485]
gi|389570445|gb|AFK86850.1| Protein recA [Thermoanaerobacterium saccharolyticum JW/SL-YS485]
Length = 343
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/342 (52%), Positives = 258/342 (75%), Gaps = 4/342 (1%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
M +K AL A+ QI FGKGSIM LG + + ++ V+STGS LDIALG GG+P+GR+
Sbjct: 1 MIEKQKALDMAISQIERQFGKGSIMRLGDN-SKLNIDVISTGSIDLDIALGVGGVPRGRI 59
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+EI+GPE+SGKTT+ALH++AEAQ+ GG FIDAEHALDP A+ +GV +NLL++QPD
Sbjct: 60 IEIFGPESSGKTTIALHILAEAQKLGGTGAFIDAEHALDPVYAKNVGVNIDNLLVSQPDT 119
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL +V+ L+RSG+VDV+V+DSVAALVPK E+DG+MGDAH+ +QARLMSQALRKLS
Sbjct: 120 GEQALEIVEALVRSGAVDVIVIDSVAALVPKAEIDGDMGDAHVGLQARLMSQALRKLSGV 179
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
+S ++++ +FINQ+R K+ FG P E T GG ALKFY+++RL+++++ +K+G + +G
Sbjct: 180 ISKTKSVAVFINQLREKVGVM-FGNP-ETTPGGRALKFYSTIRLDVRKVDGIKQGNDIVG 237
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYND-RNF 299
++ VK+VKNK+APPFK A+F++ +G+GISRE I+DLA K+GA ++Y D R
Sbjct: 238 NRTRVKVVKNKVAPPFKQAEFDIMYGEGISREGSILDLAASIDIIDKSGAWYSYGDIRLG 297
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDE 341
+G+E KQ+L EN+++ +E+ K+RE + ++ V DE
Sbjct: 298 QGRENAKQYLKENKAIADEIENKIRENFNLLVTTKKSIVDDE 339
>gi|410941188|ref|ZP_11372987.1| RecA protein [Leptospira noguchii str. 2006001870]
gi|410783747|gb|EKR72739.1| RecA protein [Leptospira noguchii str. 2006001870]
Length = 367
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 177/313 (56%), Positives = 238/313 (76%), Gaps = 3/313 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K LA++QA+ QI FGKGSIM LG + V V+ +GS LDIALG GG P GR+VEI
Sbjct: 20 KKLAIEQAMSQIEKQFGKGSIMKLGSDAAKQTVQVIPSGSLDLDIALGIGGYPIGRIVEI 79
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L IAEAQ++GG FIDAEHALDPS A+ +GV + LL++QPD GE+
Sbjct: 80 YGPESSGKTTLTLSAIAEAQKRGGVAAFIDAEHALDPSYAKKLGVNIDELLVSQPDNGEE 139
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + ++L+RS ++D++V+DSVAALVPK E++G+MGD+HM +QARLMSQALRKL+ ++S
Sbjct: 140 ALEICESLVRSNAIDLIVIDSVAALVPKAEIEGDMGDSHMGLQARLMSQALRKLTGTISK 199
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+T++IFINQ+R K+ FG P E T GGNALKFY SVRL+I++I +K+ EE++G+++
Sbjct: 200 SKTVVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYCSVRLDIRKIETIKEKEESVGNRV 257
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK APPFK A+F++ F GISRE ++DL +KH KAGA ++YN +GK
Sbjct: 258 RVKVVKNKCAPPFKQAEFDIIFNAGISREGSLVDLGVKHDIIHKAGAWYSYNTEKIGQGK 317
Query: 303 EAFKQFLVENESV 315
EA K++L N +
Sbjct: 318 EAAKEYLKNNPEI 330
>gi|288550328|ref|ZP_05969999.2| protein RecA [Enterobacter cancerogenus ATCC 35316]
gi|288315474|gb|EFC54412.1| protein RecA [Enterobacter cancerogenus ATCC 35316]
Length = 357
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/346 (55%), Positives = 244/346 (70%), Gaps = 4/346 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 11 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 69
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L V+A AQR+G C FIDAEHALDP A +GV +NLL +QPD GE
Sbjct: 70 IYGPESSGKTTLTLQVVAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGE 129
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV+VVDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 130 QALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 189
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK GE +GS+
Sbjct: 190 QSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKDGENVVGSE 247
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +K K KAGA ++YN D+ +G
Sbjct: 248 TRVKVVKNKIAAPFKQAEFQILYGEGINFYGELVDLGVKEKLIEKAGAWYSYNGDKIGQG 307
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEET 347
K +L +N + +E+ K+RE L+ + V D EET
Sbjct: 308 KANAISWLKDNPAAAKEIEKKVRELLLNNQDSKPDFVVDAADAEET 353
>gi|237729653|ref|ZP_04560134.1| RecA [Citrobacter sp. 30_2]
gi|365101549|ref|ZP_09332179.1| protein recA [Citrobacter freundii 4_7_47CFAA]
gi|395229811|ref|ZP_10408121.1| RecA [Citrobacter sp. A1]
gi|421846629|ref|ZP_16279775.1| recombinase A [Citrobacter freundii ATCC 8090 = MTCC 1658]
gi|424730026|ref|ZP_18158624.1| protein reca [Citrobacter sp. L17]
gi|226908259|gb|EEH94177.1| RecA [Citrobacter sp. 30_2]
gi|363647099|gb|EHL86328.1| protein recA [Citrobacter freundii 4_7_47CFAA]
gi|394716486|gb|EJF22224.1| RecA [Citrobacter sp. A1]
gi|411771959|gb|EKS55606.1| recombinase A [Citrobacter freundii ATCC 8090 = MTCC 1658]
gi|422895238|gb|EKU35027.1| protein reca [Citrobacter sp. L17]
gi|455643430|gb|EMF22558.1| recombinase A [Citrobacter freundii GTC 09479]
Length = 354
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/349 (55%), Positives = 249/349 (71%), Gaps = 5/349 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV+VVDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+G+ +GS+
Sbjct: 185 QSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKEGDNVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +K K KAGA ++YN +G
Sbjct: 243 TRVKVVKNKIAAPFKQAEFQILYGEGINFYGELVDLGVKEKLIEKAGAWYSYNGEKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETVST 350
K +L EN + +E+ KLRE L++++++ + +DS E+ T
Sbjct: 303 KANATNWLKENPATAKEIEKKLRE-LLLNNQDSTPDFSVDDSGEDVKET 350
>gi|218515602|ref|ZP_03512442.1| recombinase A [Rhizobium etli 8C-3]
Length = 297
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 179/296 (60%), Positives = 228/296 (77%), Gaps = 2/296 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI SFGKGSIM LG + + +STGS LDIALG GGLPKGR++EI
Sbjct: 3 KSKALEAALSQIERSFGKGSIMKLGSNENVIEIETISTGSLGLDIALGVGGLPKGRIIEI 62
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL IAE+Q++GG C F+DAEHALDP A +GV +NLL++QPD GEQ
Sbjct: 63 YGPESSGKTTLALQTIAESQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 122
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 123 ALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 182
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+ EE IG+Q
Sbjct: 183 SNTMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSVKEREEVIGNQT 240
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF 299
VK+VKNK+APPFK +F++ +G+G+S+ E++DL +K K+GA F+YN +
Sbjct: 241 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRL 296
>gi|56414781|ref|YP_151856.1| recombinase A [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|197363709|ref|YP_002143346.1| recombinase A [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
gi|76363340|sp|Q5PF15.3|RECA_SALPA RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|238689955|sp|B5BEN7.1|RECA_SALPK RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|56129038|gb|AAV78544.1| RecA protein [Salmonella enterica subsp. enterica serovar Paratyphi
A str. ATCC 9150]
gi|197095186|emb|CAR60737.1| RecA protein [Salmonella enterica subsp. enterica serovar Paratyphi
A str. AKU_12601]
Length = 353
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/347 (55%), Positives = 245/347 (70%), Gaps = 5/347 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL A+ QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAAMGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV+VVDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+G+ +GS+
Sbjct: 185 QSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKEGDNVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +K K KAGA ++YN +G
Sbjct: 243 TRVKVVKNKIAAPFKQAEFQILYGEGINFYGELVDLGVKEKLIEKAGAWYSYNGEKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHK-EPQTAVTDEDSTEET 347
K +L EN + +E+ ++RE L+ + P AV D + ET
Sbjct: 303 KANATTWLKENPATAKEIEKRVRELLLSNQNATPDFAVDDSEGVAET 349
>gi|334137176|ref|ZP_08510620.1| RecA protein [Paenibacillus sp. HGF7]
gi|333605260|gb|EGL16630.1| RecA protein [Paenibacillus sp. HGF7]
Length = 359
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 185/347 (53%), Positives = 252/347 (72%), Gaps = 4/347 (1%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
+S + AL+ AL QI FGKGSIM LG S T V + +GS ALDIALGTGG P+GR+
Sbjct: 7 LSDRRAALEMALRQIEKQFGKGSIMKLGES-THMQVETIPSGSLALDIALGTGGFPRGRI 65
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+EIYGPE+SGKTT+ALH IAE Q+ GG FIDAEHALDP A +G+ + LLL+QPD
Sbjct: 66 IEIYGPESSGKTTVALHAIAEVQKSGGQAAFIDAEHALDPLYASKLGINIDELLLSQPDT 125
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + + L+RSG+VD++V+DSVAALVPK E++GEMGD+H+ +QARLMSQALRKLS +
Sbjct: 126 GEQALEIAEALVRSGAVDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLSGA 185
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
++ S+ I IFINQ+R K+ FG P E T GG ALKFY++VRL+++R+ +K+G + +G
Sbjct: 186 INKSKVIAIFINQLREKVGVM-FGNP-ETTPGGRALKFYSTVRLDVRRVETIKQGNDMVG 243
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNF 299
++ VK+VKNK+APPFK A ++ +G+GISRE IID+ + +K+GA ++YN DR
Sbjct: 244 NRTRVKVVKNKVAPPFKQADIDIMYGEGISREGSIIDIGTELDIVNKSGAWYSYNGDRLG 303
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEE 346
+G+E KQFL EN+ + + + K+RE + + P V +D EE
Sbjct: 304 QGRENSKQFLKENKEIADVIEQKIREASNLTNVVPPAGVDVDDPDEE 350
>gi|117928699|ref|YP_873250.1| recA protein [Acidothermus cellulolyticus 11B]
gi|166199593|sp|A0LV04.1|RECA_ACIC1 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|117649162|gb|ABK53264.1| recA protein [Acidothermus cellulolyticus 11B]
Length = 345
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 184/325 (56%), Positives = 246/325 (75%), Gaps = 4/325 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
++ AL+ A+ QI + GKGS+M LG + V+ TGS ALD+ALG GGLP+GR+VEI
Sbjct: 7 REKALEHAIAQIERAHGKGSLMRLGDEARA-PIDVIPTGSIALDVALGIGGLPRGRIVEI 65
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH +A AQR GG FIDAEHALDP A+ +GV T+NLL++QPD GEQ
Sbjct: 66 YGPESSGKTTLALHAVANAQRAGGIAAFIDAEHALDPEYAKKLGVDTDNLLVSQPDTGEQ 125
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTLIRSG++DVVV+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ +LS
Sbjct: 126 ALEIADTLIRSGAIDVVVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITGALSH 185
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T IFINQ+R K+ F FG P E T GG ALKFYAS+RL+++RI +K+G+E IG++
Sbjct: 186 SGTTAIFINQLREKVGVF-FGSP-ETTTGGKALKFYASIRLDVRRIDTIKEGQEAIGNRT 243
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRGK 302
VK+VKNK A PF+ A+F++ + GISRE +ID+ ++H K+GA +TY D+ +GK
Sbjct: 244 RVKVVKNKCASPFRQAEFDILYNVGISREGSLIDMGVEHGIIRKSGAWYTYEGDQLGQGK 303
Query: 303 EAFKQFLVENESVREELVIKLREKL 327
E + FL EN + +E+ K++EKL
Sbjct: 304 ENARNFLRENPDLADEIEKKIKEKL 328
>gi|440780959|ref|ZP_20959430.1| recombinase A [Clostridium pasteurianum DSM 525]
gi|440221547|gb|ELP60752.1| recombinase A [Clostridium pasteurianum DSM 525]
Length = 353
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/349 (53%), Positives = 259/349 (74%), Gaps = 10/349 (2%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL+ AL QI FGKGSIM LG + + +STG +LDIALG GG+P+GR++EIYGP
Sbjct: 8 ALEAALGQIEKQFGKGSIMKLGEH-SVLDIDSISTGCLSLDIALGIGGVPRGRIIEIYGP 66
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTT+ALHVIAEAQ+ G FIDAEHALDP+ A +GV TENL+++QPD GEQAL
Sbjct: 67 ESSGKTTVALHVIAEAQKMEGTAAFIDAEHALDPAYARRLGVDTENLIVSQPDTGEQALE 126
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ + L+RS ++DV+VVDSVAALVPK E++GEMGD+H+ +QARLMSQALRKL+ +++ S+
Sbjct: 127 IAEALVRSNAIDVIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLAGAINKSKC 186
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
++IFINQ+R K+ FG P E T GG ALKFYASVR++I+RI +K+G+E IG++ VK
Sbjct: 187 VVIFINQLREKVGIM-FGNP-ETTPGGRALKFYASVRMDIRRIDSIKQGDEIIGNRTRVK 244
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYND-RNFRGKEAF 305
++KNK+APPFK A+F++ + +GIS+E I+D+ +K + K+GA F+Y D R +G+E
Sbjct: 245 VIKNKIAPPFKQAEFDIMYNEGISKEGNIVDVGVKEEIIQKSGAWFSYGDIRLGQGRENA 304
Query: 306 KQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETVSTISPD 354
KQ+L EN ++ E+ K+REK + K+ + DS+E+ V + D
Sbjct: 305 KQYLKENPDIKLEIETKIREKNELPIKKSK------DSSEDLVENTASD 347
>gi|317129135|ref|YP_004095417.1| recA protein [Bacillus cellulosilyticus DSM 2522]
gi|315474083|gb|ADU30686.1| recA protein [Bacillus cellulosilyticus DSM 2522]
Length = 349
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/350 (53%), Positives = 252/350 (72%), Gaps = 6/350 (1%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
MS + AL AL QI FGKGSIM LG R V VS+G+ ALDIALG GG PKGR+
Sbjct: 1 MSDRKQALDMALRQIEKQFGKGSIMKLGEQAEQR-VSTVSSGALALDIALGVGGYPKGRI 59
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+EIYGPE+SGKTT+ALH IAE QR GG FIDAEHALDP A+ +GV + LLL+QPD
Sbjct: 60 IEIYGPESSGKTTVALHAIAETQRNGGQAAFIDAEHALDPIYAQKLGVNIDELLLSQPDT 119
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + + L+RSG+VD++V+DSVAALVPK E++GEMGD+H+ +QARLMSQALRKLS +
Sbjct: 120 GEQALEIAEALVRSGAVDILVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLSGA 179
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
++ S+TI IFINQ+R K+ FG P E T GG ALKFY+SVRL ++R +K+G + +G
Sbjct: 180 INKSKTIAIFINQIREKVGVM-FGNP-ETTPGGRALKFYSSVRLEVRRAETLKQGNDMVG 237
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF- 299
++ +K+VKNK+APPF+TA+ ++ +G+GISRE ++D+A K+GA ++YN+
Sbjct: 238 NKTKIKVVKNKVAPPFRTAEVDIMYGEGISREGSLLDIASDLDIVQKSGAWYSYNEERLG 297
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETVS 349
+G+E KQFL ENE + + ++RE +D P+ A D++ E ++
Sbjct: 298 QGRENSKQFLKENEEITLAIEKQIREYHSLDT--PKVAPEDDEKMPEDLA 345
>gi|112362894|emb|CAL34148.1| recombinase A [Brucella microti CCM 4915]
gi|112362896|emb|CAL34149.1| recombinase A [Brucella microti]
Length = 299
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 180/299 (60%), Positives = 232/299 (77%), Gaps = 3/299 (1%)
Query: 11 ALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASG 70
AL QI +FGKGSIM LG++ + VSTGS +LDIALG GGLPKGR+VEIYGPE+SG
Sbjct: 3 ALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIVEIYGPESSG 62
Query: 71 KTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSLVDT 130
KTTLALH IAEAQ++GG C F+DAEHALDP A +GV ENLL++QPD GEQAL + DT
Sbjct: 63 KTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQALEITDT 122
Query: 131 LIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIF 190
L+RSG++DV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S S ++IF
Sbjct: 123 LVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSISRSNCMVIF 182
Query: 191 INQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVKIVKN 250
INQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+ +E +G+Q VK+VKN
Sbjct: 183 INQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKERDEVVGNQTRVKVVKN 240
Query: 251 KLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGKEAFKQF 308
KLAPPFK +F++ +G G+S+ E++DL +K K+GA F+YN + +G+E KQ+
Sbjct: 241 KLAPPFKQVEFDIMYGAGVSKVGELVDLGVKAGVVEKSGAWFSYNSQRLGQGRENAKQY 299
>gi|240850807|ref|YP_002972207.1| recombinase A [Bartonella grahamii as4aup]
gi|240267930|gb|ACS51518.1| recombinase A [Bartonella grahamii as4aup]
Length = 347
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/324 (58%), Positives = 238/324 (73%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI SFGKGSIM LG+ + V TGS +LDIALG GGLPKGR+VEI
Sbjct: 3 KTKALDAALSQIERSFGKGSIMRLGQKEQVVEIETVPTGSLSLDIALGIGGLPKGRIVEI 62
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH IAEAQ+ GG C FIDAEHALDP A +GV ENL ++QPD GEQ
Sbjct: 63 YGPESSGKTTLALHAIAEAQKGGGICAFIDAEHALDPIYARKLGVDLENLFISQPDTGEQ 122
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + +TL+RSG+VDV+VVDSVAAL P+ E+DGEMGDA +QARLMS+ALRKL+ ++
Sbjct: 123 ALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDALPGLQARLMSKALRKLTAAIFR 182
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S +++FINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K + +G+Q
Sbjct: 183 SNCMVVFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKDRDAIVGNQT 240
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G+GIS+ E+IDL +K K+GA F+YN + +G+
Sbjct: 241 RVKVVKNKLAPPFKQVEFDIIYGEGISKVGELIDLGVKVGIVEKSGAWFSYNSQRLGQGR 300
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E KQFL E+ + E+ LR+
Sbjct: 301 ENAKQFLREHAEIATEIESALRQN 324
>gi|399115199|emb|CCG17998.1| RecA protein (recombinase A) [Taylorella equigenitalis 14/56]
Length = 356
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/341 (55%), Positives = 243/341 (71%), Gaps = 3/341 (0%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL AL QI FGKGSIM G S + V STGS +LDIALG GGLP+GRV+EI+GP
Sbjct: 12 ALTVALAQIEKQFGKGSIMRYGDSEVEHDIQVFSTGSLSLDIALGVGGLPRGRVIEIFGP 71
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTTL L IAE Q+ GG C FIDAEHALD A +GV + LL++QPD GEQAL
Sbjct: 72 ESSGKTTLTLQAIAEMQKLGGTCAFIDAEHALDVQYAAKLGVNLDELLISQPDSGEQALE 131
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ D L+RSGS+D++VVDSVAALVPK EL+G+MGD+ +QARLMSQALRKL+ S+ +
Sbjct: 132 ITDALVRSGSIDLIVVDSVAALVPKAELEGDMGDSLPGLQARLMSQALRKLTASIKRTNC 191
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
+IFINQ+R K+ FG P E T GGNALKFY SVRL+I+RIG +KKG+E IG++ VK
Sbjct: 192 TVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYTSVRLDIRRIGSIKKGDEVIGNETRVK 249
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGKEAF 305
+VKNK+APPFK +F++ +G GISRE EIIDL +K KAG+ F+YN +GK+
Sbjct: 250 VVKNKVAPPFKQVEFDIMYGTGISREGEIIDLGVKAGIVDKAGSWFSYNGNKIGQGKDNV 309
Query: 306 KQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEE 346
+++L N + +E+ K+RE + V + T ++ DS +E
Sbjct: 310 REYLKSNPELAQEIEGKIREAMGVGGSDIFTDMSHSDSDDE 350
>gi|84496893|ref|ZP_00995747.1| recombinase A [Janibacter sp. HTCC2649]
gi|84383661|gb|EAP99542.1| recombinase A [Janibacter sp. HTCC2649]
Length = 354
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 184/327 (56%), Positives = 247/327 (75%), Gaps = 4/327 (1%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVV 61
+ +D +L L QI S GKG+IM LG V + V+ TGS ALD+ALG GGLP+GRVV
Sbjct: 11 NDRDKSLGLVLGQIEKSHGKGAIMRLGDDVRA-PIEVIPTGSIALDVALGIGGLPRGRVV 69
Query: 62 EIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCG 121
EIYGPE+SGKTT+ALH +A AQR GG FIDAEHALDP A+ +GV T+NLL++QPD G
Sbjct: 70 EIYGPESSGKTTVALHAVASAQRAGGIAAFIDAEHALDPEYAKKLGVDTDNLLVSQPDTG 129
Query: 122 EQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSL 181
EQAL + D LIRSG++D++V+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ +L
Sbjct: 130 EQALEIADMLIRSGALDIIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITGAL 189
Query: 182 SLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGS 241
S + T IFINQ+R K+ FG P E T GG ALKFYASVRL+++RI +K G + +G+
Sbjct: 190 SNTNTTAIFINQLREKIGVM-FGSP-ETTTGGKALKFYASVRLDVRRIETLKDGTDPVGN 247
Query: 242 QIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFR 300
+ VK+VKNK+APPFK A+F++ +G+GISRE +ID+ ++H F KAGA +TY D+ +
Sbjct: 248 RTRVKVVKNKVAPPFKQAEFDILYGQGISREGGLIDMGVEHGFVRKAGAWYTYEGDQLGQ 307
Query: 301 GKEAFKQFLVENESVREELVIKLREKL 327
GKE + FL +N + +EL K+++KL
Sbjct: 308 GKENARAFLKDNPDLSDELEKKIKQKL 334
>gi|288958054|ref|YP_003448395.1| recombination protein [Azospirillum sp. B510]
gi|288910362|dbj|BAI71851.1| recombination protein [Azospirillum sp. B510]
Length = 359
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 189/346 (54%), Positives = 246/346 (71%), Gaps = 5/346 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI +FGKGSIM LG VVSTGS LDIALG GGLP+GR+VEI
Sbjct: 16 KQKALDAALSQIERAFGKGSIMKLGARENLVETEVVSTGSLGLDIALGIGGLPRGRIVEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH IA+AQ+ GG C F+DAEHALDPS A +GV + LL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALHAIAQAQKNGGTCAFVDAEHALDPSYARKLGVNIDELLISQPDAGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+VVDSVAALVP+ EL+GEMGD+H+ + ARLMSQALRKL+ S++
Sbjct: 136 ALEIADTLVRSGAIDVLVVDSVAALVPRAELEGEMGDSHVGLHARLMSQALRKLTGSIAK 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K + +G+Q
Sbjct: 196 SNCLVIFINQIRLKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGSIKDRDTVVGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYND-RNFRGK 302
VK+VKNK+APPF+ +F++ +G+G+S+ E++DL ++ K+GA F+Y+ R +G+
Sbjct: 254 RVKVVKNKMAPPFRVVEFDIMYGEGVSKVGELLDLGIQAGVVDKSGAWFSYDGTRIGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK--LVVDHKEPQTAVTDEDSTEE 346
E K FL N + + + K+R LV D E ST E
Sbjct: 314 ENAKTFLRNNPEMADAIEAKIRGNAGLVADAMMGTPETDGEASTPE 359
>gi|42416883|gb|AAS16323.1| RecA [Mycobacterium immunogenum]
Length = 346
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/325 (55%), Positives = 247/325 (76%), Gaps = 4/325 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
++ AL+ AL QI SFGKGS+M LG V + + V+ TGS ALD+ALG GGLP+GRV+EI
Sbjct: 7 REKALELALAQIDKSFGKGSVMRLGDEVR-QPISVIPTGSIALDVALGIGGLPRGRVIEI 65
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ALH +A AQR GG FIDAEHALDP A+ +GV T++LL++QPD GEQ
Sbjct: 66 YGPESSGKTTVALHAVANAQRAGGIAAFIDAEHALDPEYAKKLGVDTDSLLVSQPDTGEQ 125
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RSG++D++V+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ +L+
Sbjct: 126 ALEIADMLVRSGAIDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTGALNN 185
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T IFINQ+R K+ FG P E T GG ALKFY+SVRL+++RI +K G E +G++
Sbjct: 186 SGTTAIFINQLREKIGVM-FGSP-ETTTGGKALKFYSSVRLDVRRIETLKDGTEAVGNRT 243
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK++PPFK A+F++ +GKGIS+E +ID+ ++ F K+G+ FTY +GK
Sbjct: 244 RVKVVKNKVSPPFKQAEFDILYGKGISKEGSLIDMGVEQGFIRKSGSWFTYEGEQLGQGK 303
Query: 303 EAFKQFLVENESVREELVIKLREKL 327
E + FL+EN V E+ K++EKL
Sbjct: 304 ENARNFLLENVDVANEIEKKIKEKL 328
>gi|330504207|ref|YP_004381076.1| recombinase A [Pseudomonas mendocina NK-01]
gi|328918493|gb|AEB59324.1| recombinase A [Pseudomonas mendocina NK-01]
Length = 347
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/339 (53%), Positives = 245/339 (72%), Gaps = 4/339 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKG++M +G + +P +STGS LDIALG GGLPKGR+VE
Sbjct: 4 NKKRALAAALGQIEKQFGKGAVMRMGDH-ERQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIAEAQ+ G C F+DAEHALDP A +GV ++LL++QPD GE
Sbjct: 63 IYGPESSGKTTLTLSVIAEAQKLGATCAFVDAEHALDPDYAGKLGVNVDDLLVSQPDTGE 122
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L+RS ++DV++VDSVAALVPK E++GEMGD H+ +QARLMSQALRK++ ++
Sbjct: 123 QALEITDMLVRSNAIDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ ++IFINQ+R K+ FG P E T GGNALKFY+SVRL+I+R G VK+GEE +GS+
Sbjct: 183 NANCLVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYSSVRLDIRRTGAVKEGEEVVGSE 240
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VKIVKNK+APPF+ A+F++ +GKGI R EIIDL ++ K+GA ++Y +G
Sbjct: 241 TRVKIVKNKVAPPFRQAEFQILYGKGIYRNGEIIDLGVQQGLVEKSGAWYSYQGNKIGQG 300
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTD 340
K +FL +N+ V E+ ++R+KL+V+ + + D
Sbjct: 301 KANAAKFLEDNQEVAREIEGQIRQKLLVNSTPAKASADD 339
>gi|381397036|ref|ZP_09922450.1| Protein recA [Microbacterium laevaniformans OR221]
gi|380775995|gb|EIC09285.1| Protein recA [Microbacterium laevaniformans OR221]
Length = 351
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/327 (55%), Positives = 242/327 (74%), Gaps = 4/327 (1%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVV 61
+ ++ AL+ AL QI FGKGS+M LG S V V+ TGS ALD+ALG GGLP+GR++
Sbjct: 5 ADREKALESALAQIDRQFGKGSVMRLG-SDDRAPVEVIPTGSIALDVALGVGGLPRGRII 63
Query: 62 EIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCG 121
EIYGPE+SGKTTL LH IA QR GG FIDAEHALDP A+ +GV + LL++QPD G
Sbjct: 64 EIYGPESSGKTTLTLHAIANVQRAGGIAAFIDAEHALDPDYAQKLGVDIDQLLVSQPDTG 123
Query: 122 EQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSL 181
EQAL + D L+RSG++D+VV+DSVAALVPK E++GEMGD+H+ +QARLMSQALRKL+ L
Sbjct: 124 EQALEIADMLVRSGAIDLVVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTGGL 183
Query: 182 SLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGS 241
+ + T +IFINQ+R K+ F FG P E T GG ALKFYASVRL+I+RI +K G + +G+
Sbjct: 184 NQTNTTMIFINQLREKIGVF-FGSP-ETTAGGKALKFYASVRLDIRRIETLKDGTDAVGN 241
Query: 242 QIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-R 300
+ VK+VKNK+APPFK A+F++ +G GISRE +ID ++H K+GA +TY+ +
Sbjct: 242 RTRVKVVKNKMAPPFKQAEFDILYGTGISREGSLIDFGVEHALVKKSGAWYTYDGEQLGQ 301
Query: 301 GKEAFKQFLVENESVREELVIKLREKL 327
GKE + FL++N + E+ K+++KL
Sbjct: 302 GKENARNFLLKNPDIAAEIETKIKQKL 328
>gi|344997750|ref|YP_004800604.1| recA protein [Streptomyces sp. SirexAA-E]
gi|344313376|gb|AEN08064.1| recA protein [Streptomyces sp. SirexAA-E]
Length = 356
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/348 (53%), Positives = 252/348 (72%), Gaps = 6/348 (1%)
Query: 7 ALQQALDQITSSFGKGSIMWLG-RSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYG 65
AL AL QI FGKG++M LG R P + V+ TGS ALD+ALG GGLP+GRVVE+YG
Sbjct: 9 ALDTALAQIERKFGKGAVMRLGERPNEP--IEVIPTGSTALDVALGVGGLPRGRVVEVYG 66
Query: 66 PEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQAL 125
PE+SGKTTL LH +A AQ+ GG F+DAEHALDP A+ +GV T+NL+L+QPD GEQAL
Sbjct: 67 PESSGKTTLTLHAVANAQKAGGSVAFVDAEHALDPEYAKKLGVDTDNLILSQPDNGEQAL 126
Query: 126 SLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQ 185
+VD LIRSG++D++V+DSVAALVP+ E++GEMGD+HM +QARLMSQALRK++ +LS ++
Sbjct: 127 EIVDILIRSGAIDLIVIDSVAALVPRAEIEGEMGDSHMGLQARLMSQALRKITSALSQTR 186
Query: 186 TILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAV 245
T IFINQ+R K+ FG P E T GG ALKFYASVRL+I+RI +K G + +G++ V
Sbjct: 187 TTAIFINQLREKIGVM-FGSP-ETTTGGRALKFYASVRLDIRRIETLKDGIDAVGNRTRV 244
Query: 246 KIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRGKEA 304
K+VKNK+APPFK A+F++ +G+GISRE +ID+ ++H F KAGA +TY D+ +GKE
Sbjct: 245 KVVKNKVAPPFKQAEFDILYGQGISREGGLIDMGVEHGFVRKAGAWYTYEGDQLGQGKEN 304
Query: 305 FKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETVSTIS 352
+ FL +N + E+ K+ +KL + D D +T ++
Sbjct: 305 ARNFLKDNPDLANEIEKKILQKLGIGVAAKVAVAEDTDPAPDTARPLA 352
>gi|445445406|ref|ZP_21443105.1| RecA protein [Acinetobacter baumannii WC-A-92]
gi|444761225|gb|ELW85639.1| RecA protein [Acinetobacter baumannii WC-A-92]
Length = 349
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/341 (53%), Positives = 243/341 (71%), Gaps = 4/341 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K ALQ AL QI FGK ++M LG + T + V VSTGS LDIALG GGLPKGR++E
Sbjct: 4 NKSKALQAALSQIEKQFGKNTVMRLGDN-TVQAVEAVSTGSLTLDIALGIGGLPKGRIIE 62
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTT+ L IA+ Q+ GG C FIDAEHALDP A +GV +NLL++QPD GE
Sbjct: 63 IYGPESSGKTTMTLQAIAQCQKSGGTCGFIDAEHALDPQYARKLGVDIDNLLVSQPDNGE 122
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L+RSG++D++VVDSVAAL PK E++GEMGD+HM +QARLMSQALRK++ +
Sbjct: 123 QALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAK 182
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+G+E +GS+
Sbjct: 183 RSNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGQVKEGDEIVGSE 240
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK+VKNK+APPFK A F++ +GKG ++ E++DLA++ KAGA ++Y +G
Sbjct: 241 TKVKVVKNKMAPPFKEAIFQILYGKGTNQLGELVDLAVQQDIVQKAGAWYSYQGNKIGQG 300
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDED 342
K ++ EN + EE+ +RE+L+ + DE+
Sbjct: 301 KNNVIRYFEENTQIAEEIERNIREQLLTTGTNGAVQIEDEE 341
>gi|415717489|ref|ZP_11466852.1| recombinase A [Gardnerella vaginalis 1500E]
gi|388060836|gb|EIK83511.1| recombinase A [Gardnerella vaginalis 1500E]
Length = 380
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/336 (54%), Positives = 248/336 (73%), Gaps = 4/336 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
++ AL+ AL + +GKGS M LG + V V+ TGS ALD ALG GG+P+GR+VE
Sbjct: 23 RRQAALETALANVERQYGKGSAMRLGDRPM-QDVEVIPTGSIALDTALGIGGVPRGRIVE 81
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
+YGPE+SGKTTLALH++A AQ+ GG FIDAEHALDP A +GV T+ L+++QPD GE
Sbjct: 82 VYGPESSGKTTLALHIVANAQKNGGVAAFIDAEHALDPVYARKLGVDTDALIVSQPDNGE 141
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D LIRSG++DV+VVDSVAALVPK E+DG+MGD+H+ +QARLMSQALRK++ +LS
Sbjct: 142 QALEIADMLIRSGALDVIVVDSVAALVPKAEIDGDMGDSHVGLQARLMSQALRKMTGALS 201
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ T IFINQ+R K+ F FG P E T GG ALKFYASVR++I+R+ +K+GEE IG++
Sbjct: 202 QAGTTAIFINQLREKIGVF-FGNP-ETTTGGKALKFYASVRMDIRRVSTIKEGEEAIGNR 259
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VKIVKNK+APPFKTA+F++ +G+GIS E +ID+ L+ K+G+ FTY +G
Sbjct: 260 TKVKIVKNKMAPPFKTAEFDVLYGEGISTEGSVIDMGLQADVIKKSGSWFTYEGEQLGQG 319
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTA 337
+E ++FL +N ++ EE+ K++ L + H + Q A
Sbjct: 320 RENVRKFLKDNPAITEEISEKIKAALGLMHPDDQFA 355
>gi|310658983|ref|YP_003936704.1| DNA strand exchange and recombination protein with protease and
nuclease activity [[Clostridium] sticklandii]
gi|308825761|emb|CBH21799.1| DNA strand exchange and recombination protein with protease and
nuclease activity [[Clostridium] sticklandii]
Length = 350
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 179/347 (51%), Positives = 255/347 (73%), Gaps = 4/347 (1%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
M +K AL A+ +I FGKGSIM LG + ++ +STGS LD+A+G GGLPKGR+
Sbjct: 6 MEEKRKALDAAIAKIEKDFGKGSIMTLGEN-AKMNIETISTGSIGLDVAIGIGGLPKGRI 64
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
VEIYGPE+SGKTT+ALH +AEAQ+ GG F+DAEHALDP A+ +GV + L+++QPD
Sbjct: 65 VEIYGPESSGKTTVALHAVAEAQKLGGIAAFVDAEHALDPVYAKALGVDIDKLIVSQPDT 124
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + ++L+RSG++D++VVDSVAALVPK E++GEMGD+H+ +QARLMSQALRKL+ S
Sbjct: 125 GEQALEITESLVRSGAIDIIVVDSVAALVPKAEIEGEMGDSHIGLQARLMSQALRKLAGS 184
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
++ S+TI IFINQ+R K+ FG P E T GG ALKFYASVRL++++I ++K+G+ +G
Sbjct: 185 INKSKTITIFINQLREKVGVM-FGNP-ETTTGGRALKFYASVRLDVRKIDIIKQGDTMLG 242
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF- 299
S+ VK+VKNK+APPFK +F++ +G+GIS+ E++D+ K+GA ++YN+
Sbjct: 243 SRTRVKVVKNKVAPPFKQCEFDIMYGQGISKVGELVDIGANLDIIKKSGAWYSYNEERLG 302
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEE 346
+G+E KQF +EN + E+ K+RE ++ + A TD D ++E
Sbjct: 303 QGRENVKQFFMENPELMNEVESKVREYFNINTSPIEIAKTDVDDSKE 349
>gi|410450655|ref|ZP_11304689.1| RecA protein [Leptospira sp. Fiocruz LV3954]
gi|421110176|ref|ZP_15570677.1| RecA protein [Leptospira santarosai str. JET]
gi|422004495|ref|ZP_16351712.1| recombinase A [Leptospira santarosai serovar Shermani str. LT 821]
gi|410015533|gb|EKO77631.1| RecA protein [Leptospira sp. Fiocruz LV3954]
gi|410804361|gb|EKS10478.1| RecA protein [Leptospira santarosai str. JET]
gi|417256797|gb|EKT86211.1| recombinase A [Leptospira santarosai serovar Shermani str. LT 821]
Length = 365
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 177/313 (56%), Positives = 238/313 (76%), Gaps = 3/313 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K LA++QA+ QI FGKGSIM LG + V V+ TGS LDIALG GG P GR+VEI
Sbjct: 20 KKLAIEQAMTQIEKQFGKGSIMKLGSDAAKQTVQVIPTGSLDLDIALGIGGYPIGRIVEI 79
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L IAEAQ++GG FIDAEHALDPS A+ +GV + LL++QPD GE+
Sbjct: 80 YGPESSGKTTLTLSAIAEAQKRGGVAAFIDAEHALDPSYAKKLGVNIDELLVSQPDNGEE 139
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + ++L+RS ++D++V+DSVAALVPK E++G+MGD+HM +QARLMSQALRKL+ +++
Sbjct: 140 ALEICESLVRSNAIDLIVIDSVAALVPKAEIEGDMGDSHMGLQARLMSQALRKLTGTIAK 199
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+T++IFINQ+R K+ FG P E T GGNALKFY SVRL+I++I +K+ EE++G+++
Sbjct: 200 SKTVVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYCSVRLDIRKIETIKEKEESVGNRV 257
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK APPFK A+F++ F GISRE ++DL +KH KAGA ++YN +GK
Sbjct: 258 RVKVVKNKCAPPFKQAEFDIIFNAGISREGSLVDLGVKHDIIHKAGAWYSYNTEKIGQGK 317
Query: 303 EAFKQFLVENESV 315
EA K++L N +
Sbjct: 318 EAAKEYLKNNPEI 330
>gi|340000388|ref|YP_004731272.1| recombinase A [Salmonella bongori NCTC 12419]
gi|109453502|gb|ABG34231.1| RecA [Salmonella enterica]
gi|109453504|gb|ABG34232.1| RecA [Salmonella enterica]
gi|109453506|gb|ABG34233.1| RecA [Salmonella enterica]
gi|109453508|gb|ABG34234.1| RecA [Salmonella enterica]
gi|109453510|gb|ABG34235.1| RecA [Salmonella enterica]
gi|109453512|gb|ABG34236.1| RecA [Salmonella enterica]
gi|339513750|emb|CCC31507.1| RecA protein [Salmonella bongori NCTC 12419]
Length = 353
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 192/347 (55%), Positives = 245/347 (70%), Gaps = 5/347 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYARKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV+VVDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+G+ +GS+
Sbjct: 185 QSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKEGDNVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +K K KAGA ++YN +G
Sbjct: 243 TRVKVVKNKIAAPFKQAEFQILYGEGINFYGELVDLGVKEKLIEKAGAWYSYNGEKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKE-PQTAVTDEDSTEET 347
K +L EN + +E+ K+RE L+ + P +V D + ET
Sbjct: 303 KANATTWLKENPATAKEIEKKVRELLLSNQDSTPDFSVDDSEGVAET 349
>gi|54025813|ref|YP_120055.1| recombinase A [Nocardia farcinica IFM 10152]
gi|59798146|sp|Q5YT00.1|RECA_NOCFA RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|54017321|dbj|BAD58691.1| putative RecA protein [Nocardia farcinica IFM 10152]
Length = 347
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 178/325 (54%), Positives = 248/325 (76%), Gaps = 4/325 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
+D AL+ AL Q+ SFGKG++M LG + + V+ TGS ALD+ALG GGLP+GR+VEI
Sbjct: 8 RDKALELALAQVEKSFGKGAVMRLGEEAR-QPISVIPTGSIALDVALGIGGLPRGRIVEI 66
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ALH +A AQ GG FIDAEHALDP A +GV T+ LL++QPD GEQ
Sbjct: 67 YGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYARKLGVDTDALLVSQPDTGEQ 126
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RSG++D++V+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ +L+
Sbjct: 127 ALEIADMLVRSGAIDIIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTSALNN 186
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T IFINQ+R K+ FG P E T GG ALKFYASVRL+++RI +K G + +G++
Sbjct: 187 SGTTAIFINQLREKIGVM-FGSP-ETTTGGKALKFYASVRLDVRRIETLKDGSDAVGNRT 244
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRGK 302
VK+VKNK++PPFK A+F++ +G+GIS+E +ID+ ++ F K+G+ +TY D+ +GK
Sbjct: 245 RVKVVKNKVSPPFKQAEFDILYGQGISKEGSLIDMGVEQGFIRKSGSWYTYEGDQLGQGK 304
Query: 303 EAFKQFLVENESVREELVIKLREKL 327
E ++FL+EN VR+E+ K++EKL
Sbjct: 305 ENARKFLLENTDVRDEIEKKIKEKL 329
>gi|373457380|ref|ZP_09549147.1| Protein recA [Caldithrix abyssi DSM 13497]
gi|371719044|gb|EHO40815.1| Protein recA [Caldithrix abyssi DSM 13497]
Length = 348
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/341 (53%), Positives = 255/341 (74%), Gaps = 4/341 (1%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
A++ A+ QI +FGKG+IM LG V V V+ TGS +LD ALG GG+P+GR+ EIYGP
Sbjct: 10 AIEIAVSQIERNFGKGAIMRLGDRVKI-DVDVIPTGSVSLDAALGIGGVPRGRITEIYGP 68
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTTLALH+IAEAQ++GG F+DAEHALDP A+ +GV T NLL++QPD GEQAL
Sbjct: 69 ESSGKTTLALHIIAEAQKRGGLAAFVDAEHALDPGYAKKLGVDTINLLVSQPDNGEQALE 128
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+V+TL+RSG++DV+V+DSVAALVPK E++GEMGD+HM +QARLMSQALRKL+ ++S S T
Sbjct: 129 IVETLVRSGALDVIVIDSVAALVPKAEIEGEMGDSHMGLQARLMSQALRKLTGTVSKSNT 188
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
+IFINQ+R KL FG P E T GG ALKFY S+RL+I+RI +K G E +G++ VK
Sbjct: 189 CVIFINQIREKLGVM-FGNP-ETTTGGRALKFYTSIRLDIRRIATIKVGNEMVGNRTRVK 246
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYND-RNFRGKEAF 305
+VKNK+APPF+ A+F++ + +GIS+E +++D A++ + K+G F+YND R +G+E
Sbjct: 247 VVKNKMAPPFREAEFDIMYDQGISKEGDVLDKAVEFRIVQKSGTWFSYNDLRLGQGRENV 306
Query: 306 KQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEE 346
K FL EN V +E+ ++R K+ ++ E + ++ +E
Sbjct: 307 KAFLKENPEVFQEIEKQVRMKVGLEKDEAEADAQGKNVKQE 347
>gi|148887229|emb|CAM12781.1| recombinase A [Ochrobactrum anthropi]
Length = 299
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 179/299 (59%), Positives = 232/299 (77%), Gaps = 3/299 (1%)
Query: 11 ALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASG 70
AL QI +FGKGSIM LG++ + VSTGS +LDIALG GGLPKGR+VEIYGPE+SG
Sbjct: 3 ALSQIERAFGKGSIMRLGQNDHSIEIETVSTGSLSLDIALGVGGLPKGRIVEIYGPESSG 62
Query: 71 KTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSLVDT 130
KTTLALH IAEAQ++GG C F+DAEHALDP A +GV ENLL++QPD GEQAL + DT
Sbjct: 63 KTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQALEITDT 122
Query: 131 LIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIF 190
L+RSG++DV+V+DSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S S ++IF
Sbjct: 123 LVRSGAIDVLVIDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISRSNCMVIF 182
Query: 191 INQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVKIVKN 250
INQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+ +E +G+Q VK+VKN
Sbjct: 183 INQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKERDEVVGNQTRVKVVKN 240
Query: 251 KLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGKEAFKQF 308
KLAPPFK +F++ +G G+S+ E++DL +K K+GA F+YN + +G+E KQ+
Sbjct: 241 KLAPPFKQVEFDIMYGAGVSKMGELVDLGVKAGVVEKSGAWFSYNSQRLGQGRENAKQY 299
>gi|429462914|ref|YP_007184377.1| recombination protein RecA [Candidatus Kinetoplastibacterium
crithidii (ex Angomonas deanei ATCC 30255)]
gi|451811340|ref|YP_007447795.1| recombination protein RecA [Candidatus Kinetoplastibacterium
crithidii TCC036E]
gi|429338428|gb|AFZ82851.1| recombination protein RecA [Candidatus Kinetoplastibacterium
crithidii (ex Angomonas deanei ATCC 30255)]
gi|451776498|gb|AGF47497.1| recombination protein RecA [Candidatus Kinetoplastibacterium
crithidii TCC036E]
Length = 352
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/328 (55%), Positives = 240/328 (73%), Gaps = 3/328 (0%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVV 61
S KD AL A+ QI FGKGS+M G + + V+STGS LDIALG GGLP+GRV+
Sbjct: 11 SDKDKALSAAISQIEKQFGKGSVMRYGDNDVQNDIQVISTGSLGLDIALGVGGLPRGRVI 70
Query: 62 EIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCG 121
EIYGPE+SGKTTL L VIAE Q+ GG C FIDAEHALD A +G+ +LL++QPD G
Sbjct: 71 EIYGPESSGKTTLTLQVIAEMQKIGGTCAFIDAEHALDVQYASKLGIVLSDLLVSQPDTG 130
Query: 122 EQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSL 181
EQAL + D L+RSGSVD++V+DSVAALVPK E++G+MGD+ +QARLMSQALRKL+ ++
Sbjct: 131 EQALEIADALVRSGSVDLIVIDSVAALVPKAEIEGDMGDSLPGLQARLMSQALRKLTATI 190
Query: 182 SLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGS 241
+ ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+R+G +KKG+E +GS
Sbjct: 191 KRTNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRVGSIKKGDEVVGS 248
Query: 242 QIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-R 300
+ VK+VKNK+APPFK A+F++ +G GISR EIIDL + + F K+G+ ++Y +
Sbjct: 249 ETRVKVVKNKVAPPFKQAEFDIMYGTGISRAGEIIDLGVTNGFLEKSGSWYSYKGNKIGQ 308
Query: 301 GKEAFKQFLVENESVREELVIKLREKLV 328
GK+ ++FL N V +E+ +RE L+
Sbjct: 309 GKDTVREFLNANVDVSKEIEDSIRENLI 336
>gi|404483825|ref|ZP_11019042.1| protein recA [Clostridiales bacterium OBRC5-5]
gi|404343184|gb|EJZ69551.1| protein recA [Clostridiales bacterium OBRC5-5]
Length = 388
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/361 (51%), Positives = 258/361 (71%), Gaps = 6/361 (1%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVV 61
S+K AL+ AL QI ++GKGS+M LG T V + TGS LDIALG GG+PKGR++
Sbjct: 20 SEKQAALESALTQIEKAYGKGSVMKLGDGNTNMFVETIPTGSLGLDIALGVGGIPKGRII 79
Query: 62 EIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCG 121
E+YGPE+SGKTT+ALH++AEAQ+ GG FIDAEHALDP A+ IGV + L ++QPD G
Sbjct: 80 EVYGPESSGKTTVALHMVAEAQKLGGIAAFIDAEHALDPVYADKIGVNIDELYVSQPDNG 139
Query: 122 EQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSL 181
EQAL + +T++RSG++D+++VDSVAALVPKGE++G+MGD+HM +QARLMSQ LRKL+ +
Sbjct: 140 EQALEITETMVRSGAIDIIIVDSVAALVPKGEIEGDMGDSHMGLQARLMSQGLRKLTGIV 199
Query: 182 SLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGS 241
S S I+IFINQ+R K+ FG P E T GG ALKFYASVRL+++++ +K+G E IG+
Sbjct: 200 SKSNCIVIFINQLRDKIGVM-FGSP-ETTTGGRALKFYASVRLDVRKVEQIKQGGEIIGT 257
Query: 242 QIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-R 300
+ +K+VKNK+APPFK A+F++ +G GIS+ EI+DLA+ K GA ++Y +
Sbjct: 258 KTRIKVVKNKVAPPFKEAEFDIMYGLGISKSGEILDLAVASDVVEKGGAWYSYEGTKIGQ 317
Query: 301 GKEAFKQFLVENESVREELVIKLREKLVVD-HKEPQTAVTD--EDSTEETVSTISPDSTD 357
G+E K FL+EN + E++ ++REK V++ K +T D +D EE + D D
Sbjct: 318 GRENAKTFLMENPEICEKIEEQIREKFVLEAEKNGKTLEYDSVDDDDEEFDGSPIEDDMD 377
Query: 358 E 358
E
Sbjct: 378 E 378
>gi|359686028|ref|ZP_09256029.1| recombinase A [Leptospira santarosai str. 2000030832]
gi|418747174|ref|ZP_13303484.1| RecA protein [Leptospira santarosai str. CBC379]
gi|418752437|ref|ZP_13308698.1| RecA protein [Leptospira santarosai str. MOR084]
gi|409967167|gb|EKO35003.1| RecA protein [Leptospira santarosai str. MOR084]
gi|410791968|gb|EKR89913.1| RecA protein [Leptospira santarosai str. CBC379]
gi|456876675|gb|EMF91754.1| RecA protein [Leptospira santarosai str. ST188]
Length = 365
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 177/313 (56%), Positives = 238/313 (76%), Gaps = 3/313 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K LA++QA+ QI FGKGSIM LG + V V+ TGS LDIALG GG P GR+VEI
Sbjct: 20 KKLAIEQAMTQIEKQFGKGSIMKLGSDAAKQTVQVIPTGSLDLDIALGIGGYPIGRIVEI 79
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L IAEAQ++GG FIDAEHALDPS A+ +GV + LL++QPD GE+
Sbjct: 80 YGPESSGKTTLTLSAIAEAQKRGGVAAFIDAEHALDPSYAKKLGVNIDELLVSQPDNGEE 139
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + ++L+RS ++D++V+DSVAALVPK E++G+MGD+HM +QARLMSQALRKL+ +++
Sbjct: 140 ALEICESLVRSNAIDLIVIDSVAALVPKAEIEGDMGDSHMGLQARLMSQALRKLTGTIAK 199
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+T++IFINQ+R K+ FG P E T GGNALKFY SVRL+I++I +K+ EE++G+++
Sbjct: 200 SKTVVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYCSVRLDIRKIETIKEKEESVGNRV 257
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK APPFK A+F++ F GISRE ++DL +KH KAGA ++YN +GK
Sbjct: 258 RVKVVKNKCAPPFKQAEFDIIFNAGISREGSLVDLGVKHDIIHKAGAWYSYNTEKIGQGK 317
Query: 303 EAFKQFLVENESV 315
EA K++L N +
Sbjct: 318 EAAKEYLKNNPEI 330
>gi|333919370|ref|YP_004492951.1| protein recA [Amycolicicoccus subflavus DQS3-9A1]
gi|333481591|gb|AEF40151.1| Protein recA [Amycolicicoccus subflavus DQS3-9A1]
Length = 361
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/325 (55%), Positives = 246/325 (75%), Gaps = 4/325 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
++ AL+ AL QI +FGKGS+M LG V P + + TGS ALD+ALG GGLP+GRV+EI
Sbjct: 23 REKALELALAQIDKNFGKGSVMRLGDEVRP-PISTIPTGSVALDVALGIGGLPRGRVIEI 81
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ALH +A AQR GG FIDAEHALDP A+ +GV T+ LL++QPD GEQ
Sbjct: 82 YGPESSGKTTVALHAVANAQRAGGIAAFIDAEHALDPEYAKALGVDTDALLVSQPDTGEQ 141
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L RSG++D++V+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ +LS
Sbjct: 142 ALEIADMLTRSGALDIIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTSALSS 201
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T IFINQ+R K+ FG P E T GG ALKFYASVRL+++RI +K G + +G++
Sbjct: 202 SGTTAIFINQLREKIGVM-FGSP-ETTTGGKALKFYASVRLDVRRIETLKDGGDAVGNRT 259
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGK 302
VK+VKNK++PPFK A+F++ +GKGISRE +ID+ + F K+G+ FTY+ D+ +GK
Sbjct: 260 RVKVVKNKVSPPFKQAEFDILYGKGISREGSLIDMGVDQGFIRKSGSWFTYDGDQLGQGK 319
Query: 303 EAFKQFLVENESVREELVIKLREKL 327
E +++L+EN + E+ K+ EKL
Sbjct: 320 ENARRYLIENPDIANEVEKKILEKL 344
>gi|146424877|emb|CAM12547.1| recombinase A [Ochrobactrum anthropi]
gi|146424881|emb|CAM12549.1| recombinase A [Ochrobactrum anthropi]
gi|146424883|emb|CAM12550.1| recombinase A [Ochrobactrum anthropi]
gi|146424885|emb|CAM12551.1| recombinase A [Ochrobactrum anthropi]
gi|146424887|emb|CAM12552.1| recombinase A [Ochrobactrum anthropi]
gi|146424889|emb|CAM12553.1| recombinase A [Ochrobactrum anthropi]
gi|146424891|emb|CAM12554.1| recombinase A [Ochrobactrum anthropi]
gi|146424895|emb|CAM12556.1| recombinase A [Ochrobactrum anthropi]
gi|146424897|emb|CAM12557.1| recombinase A [Ochrobactrum anthropi]
gi|146424899|emb|CAM12558.1| recombinase A [Ochrobactrum anthropi]
gi|146424901|emb|CAM12559.1| recombinase A [Ochrobactrum anthropi]
gi|146424903|emb|CAM12560.1| recombinase A [Ochrobactrum anthropi]
gi|146424905|emb|CAM12561.1| recombinase A [Ochrobactrum anthropi]
gi|146424907|emb|CAM12562.1| recombinase A [Ochrobactrum anthropi]
gi|146424909|emb|CAM12563.1| recombinase A [Ochrobactrum anthropi]
gi|146424911|emb|CAM12564.1| recombinase A [Ochrobactrum anthropi]
gi|146424913|emb|CAM12565.1| recombinase A [Ochrobactrum anthropi]
gi|146424915|emb|CAM12566.1| recombinase A [Ochrobactrum anthropi]
gi|146424917|emb|CAM12567.1| recombinase A [Ochrobactrum anthropi]
gi|146424919|emb|CAM12568.1| recombinase A [Ochrobactrum anthropi]
gi|146424921|emb|CAM12569.1| recombinase A [Ochrobactrum anthropi]
gi|146424923|emb|CAM12570.1| recombinase A [Ochrobactrum anthropi]
gi|146424925|emb|CAM12571.1| recombinase A [Ochrobactrum anthropi]
gi|146424927|emb|CAM12572.1| recombinase A [Ochrobactrum anthropi]
gi|146424929|emb|CAM12573.1| recombinase A [Ochrobactrum anthropi]
gi|146424931|emb|CAM12574.1| recombinase A [Ochrobactrum anthropi]
gi|146424933|emb|CAM12575.1| recombinase A [Ochrobactrum anthropi]
gi|146424935|emb|CAM12576.1| recombinase A [Ochrobactrum anthropi]
gi|146424937|emb|CAM12577.1| recombinase A [Ochrobactrum anthropi]
gi|146424939|emb|CAM12578.1| recombinase A [Ochrobactrum anthropi]
gi|146424941|emb|CAM12579.1| recombinase A [Ochrobactrum anthropi]
gi|146424943|emb|CAM12580.1| recombinase A [Ochrobactrum anthropi]
gi|146424945|emb|CAM12581.1| recombinase A [Ochrobactrum anthropi]
gi|146424947|emb|CAM12582.1| recombinase A [Ochrobactrum anthropi]
gi|146424949|emb|CAM12583.1| recombinase A [Ochrobactrum anthropi]
gi|146424951|emb|CAM12584.1| recombinase A [Ochrobactrum anthropi]
gi|146424953|emb|CAM12585.1| recombinase A [Ochrobactrum anthropi]
gi|146424955|emb|CAM12586.1| recombinase A [Ochrobactrum anthropi]
gi|146424957|emb|CAM12587.1| recombinase A [Ochrobactrum anthropi]
gi|146424959|emb|CAM12588.1| recombinase A [Ochrobactrum anthropi]
gi|146424961|emb|CAM12589.1| recombinase A [Ochrobactrum anthropi]
gi|146424963|emb|CAM12590.1| recombinase A [Ochrobactrum anthropi]
gi|146424965|emb|CAM12591.1| recombinase A [Ochrobactrum anthropi]
gi|146424967|emb|CAM12592.1| recombinase A [Ochrobactrum anthropi]
gi|146424969|emb|CAM12593.1| recombinase A [Ochrobactrum anthropi]
gi|146424971|emb|CAM12594.1| recombinase A [Ochrobactrum anthropi]
gi|146424977|emb|CAM12597.1| recombinase A [Ochrobactrum anthropi]
gi|146424979|emb|CAM12598.1| recombinase A [Ochrobactrum anthropi]
gi|146424981|emb|CAM12599.1| recombinase A [Ochrobactrum anthropi]
gi|146424983|emb|CAM12600.1| recombinase A [Ochrobactrum anthropi]
gi|148887235|emb|CAM12784.1| recombinase A [Ochrobactrum anthropi]
gi|148887247|emb|CAM12790.1| recombinase A [Ochrobactrum anthropi]
gi|148897665|emb|CAM18486.1| recombinase A [Ochrobactrum intermedium]
gi|148897695|emb|CAM18501.1| recombinase A [Ochrobactrum lupini]
gi|148897697|emb|CAM18502.1| recombinase A [Ochrobactrum tritici]
gi|148897699|emb|CAM18503.1| recombinase A [Ochrobactrum tritici]
gi|148897701|emb|CAM18504.1| recombinase A [Ochrobactrum tritici]
gi|148897711|emb|CAM18509.1| recombinase A [Ochrobactrum anthropi]
Length = 299
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 179/299 (59%), Positives = 231/299 (77%), Gaps = 3/299 (1%)
Query: 11 ALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASG 70
AL QI +FGKGSIM LG++ + V TGS +LDIALG GGLPKGR+VEIYGPE+SG
Sbjct: 3 ALSQIERAFGKGSIMRLGKNAPVIEIETVPTGSLSLDIALGVGGLPKGRIVEIYGPESSG 62
Query: 71 KTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSLVDT 130
KTTLALH IAEAQ++GG C F+DAEHALDP A +GV ENLL++QPD GEQAL + DT
Sbjct: 63 KTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQALEITDT 122
Query: 131 LIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIF 190
L+RSG++DV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S S ++IF
Sbjct: 123 LVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISRSNCMVIF 182
Query: 191 INQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVKIVKN 250
INQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+ +E +G+Q VK+VKN
Sbjct: 183 INQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKERDEVVGNQTRVKVVKN 240
Query: 251 KLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGKEAFKQF 308
KLAPPFK +F++ +G G+S+ E++DL +K K+GA F+YN + +G+E KQ+
Sbjct: 241 KLAPPFKQVEFDIMYGAGVSKTGELVDLGVKAGVVEKSGAWFSYNSQRLGQGRENAKQY 299
>gi|410667508|ref|YP_006919879.1| protein RecA [Thermacetogenium phaeum DSM 12270]
gi|409105255|gb|AFV11380.1| protein RecA [Thermacetogenium phaeum DSM 12270]
Length = 348
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 185/349 (53%), Positives = 258/349 (73%), Gaps = 5/349 (1%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
M+ K AL+ AL I +FG+GSIM LG + +V V+ +G+ LD+ALG GG+P+GR+
Sbjct: 1 MNDKLKALELALSHIEKAFGRGSIMRLGDTPAQLNVDVIPSGNLPLDLALGVGGIPRGRI 60
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+EIYGPE+SGKTT+ALHV+AEAQ++GG FIDAEHALDP A+ +GV +NL ++QPD
Sbjct: 61 IEIYGPESSGKTTVALHVVAEAQKRGGMAAFIDAEHALDPVYAQALGVDIDNLYVSQPDT 120
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + +TL+RSG++DV+V+DSVAALVP+ EL+GEMGDAH+ +QARLMSQALRKL+ +
Sbjct: 121 GEQALEITETLVRSGALDVIVIDSVAALVPRAELEGEMGDAHVGLQARLMSQALRKLTGT 180
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
+S ++T IFINQ+R K+ FG P EVT GG ALKFYASVRL +K+I L+K+G + +G
Sbjct: 181 ISKTKTTAIFINQIREKVGVM-FGNP-EVTTGGRALKFYASVRLEVKKIDLIKQGTDIVG 238
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF- 299
S+ +K+VKNK+APPFK + +L +GKGISRE ++DL L+ SK+G+ F Y +
Sbjct: 239 SRTRIKVVKNKVAPPFKQVECDLMYGKGISREGGLLDLGLEFGIISKSGSWFAYGEERLG 298
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVDHKEPQT--AVTDEDSTEE 346
+G+E K+FL E+ + +E+ K+RE + +T A +DED T +
Sbjct: 299 QGRENAKEFLREHPEIAQEIEQKIREVTSIKQGIFRTGSAFSDEDVTPQ 347
>gi|414341531|ref|YP_006983052.1| recombinase A [Gluconobacter oxydans H24]
gi|411026866|gb|AFW00121.1| RecA [Gluconobacter oxydans H24]
Length = 344
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/323 (56%), Positives = 247/323 (76%), Gaps = 6/323 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPR-HVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL+ AL QI +FGKGSIM +G+ P+ V+STGS LDIALG GG+P+GR+VE
Sbjct: 3 KTKALEGALSQIERAFGKGSIMRMGQR--PKEQADVISTGSLGLDIALGIGGMPRGRIVE 60
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTLALHV+AEAQ++GG FIDAEHALDP A +GV + LLL+QPD GE
Sbjct: 61 IYGPESSGKTTLALHVLAEAQKKGGTVAFIDAEHALDPGYARKLGVNIDELLLSQPDAGE 120
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + DTL+RSG+VDV+VVDSVAALVP+ EL+G+MGD+H+ + ARLMSQALRKL+ ++S
Sbjct: 121 QALEICDTLVRSGAVDVLVVDSVAALVPRAELEGDMGDSHVGLHARLMSQALRKLTGTVS 180
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T++IF+NQ+R K+ FG P E T GGNALKFY+S+RL+I+RIG +K +E +G+Q
Sbjct: 181 RSNTLVIFLNQIRMKIGVM-FGNP-ETTTGGNALKFYSSIRLDIRRIGSIKDKDEVVGNQ 238
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK+VKNK+APPF+ +F++ +G+GIS+ E++DL +K K+GA F+++ + +G
Sbjct: 239 TRVKVVKNKMAPPFRQVEFDIMYGEGISKMGELLDLGVKANIVEKSGAWFSFDSQRIGQG 298
Query: 302 KEAFKQFLVENESVREELVIKLR 324
+E KQFL E+ + E+ ++R
Sbjct: 299 RENAKQFLREHPEMSSEIERRIR 321
>gi|398347369|ref|ZP_10532072.1| recombinase A [Leptospira broomii str. 5399]
Length = 372
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 177/323 (54%), Positives = 244/323 (75%), Gaps = 3/323 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K +A+ QA+ QI FGKGSIM LG + +PV+ TGS LDIALG GG P GR++EI
Sbjct: 24 KKMAIDQAMTQIEKQFGKGSIMRLGAASATNVMPVIPTGSLDLDIALGIGGYPLGRIIEI 83
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L IAEAQ++GG FIDAEHALDPS A+ +GV E LL++QPD GE+
Sbjct: 84 YGPESSGKTTLTLAAIAEAQKRGGVAAFIDAEHALDPSYAKKLGVNLEELLVSQPDNGEE 143
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + ++L+RS ++D++VVDSVAALVPK E++G+MGDAHM +QARLMSQALRKL+ ++S
Sbjct: 144 ALEICESLVRSNAIDIIVVDSVAALVPKAEIEGDMGDAHMGLQARLMSQALRKLTGTISK 203
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+T+++FINQ+R K+ FG P E T GGNALKFY+S+RL+I++I +K+ EE G+++
Sbjct: 204 SRTVVVFINQIRMKIGVM-FGSP-ETTTGGNALKFYSSIRLDIRKIETLKEKEEATGNRV 261
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK APPF+ A+F++ + GISRES ++DL +KH SK+GA ++YN +GK
Sbjct: 262 RVKVVKNKTAPPFRQAEFDIIYNTGISRESSLVDLGVKHDIISKSGAWYSYNTEKIGQGK 321
Query: 303 EAFKQFLVENESVREELVIKLRE 325
EA K++L N + ++ +R+
Sbjct: 322 EAAKEYLKANPEIAYQIENMVRD 344
>gi|377559194|ref|ZP_09788754.1| protein RecA [Gordonia otitidis NBRC 100426]
gi|377523652|dbj|GAB33919.1| protein RecA [Gordonia otitidis NBRC 100426]
Length = 347
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/325 (56%), Positives = 248/325 (76%), Gaps = 4/325 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
++ AL AL QI +FGKGS+M LG + + + V+ TGS ALD+ALG GGLP+GRVVEI
Sbjct: 8 REKALDLALAQIDKNFGKGSVMRLGEE-SRQPIEVIPTGSIALDVALGIGGLPRGRVVEI 66
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ALH +A AQ GG FIDAEHALDP A +GV T+ LL++QPD GEQ
Sbjct: 67 YGPESSGKTTVALHAVANAQAAGGIAAFIDAEHALDPDYATKLGVDTDALLVSQPDTGEQ 126
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D LIRSG++D++V+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ +LS
Sbjct: 127 ALEIADMLIRSGALDILVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTSALSS 186
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+T IFINQ+R K+ FG P E T GG ALKFY+SVRL+++RI +K G E +G++
Sbjct: 187 SKTTAIFINQLREKIGVM-FGSP-ETTTGGKALKFYSSVRLDVRRIETLKDGTEAVGNRT 244
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRGK 302
VK+VKNK+APPFK A+F++ +G+GIS+E +ID+ + F K+G+ FTY D+ +GK
Sbjct: 245 RVKVVKNKVAPPFKQAEFDILYGQGISKEGSLIDMGVAEGFIRKSGSWFTYEGDQLGQGK 304
Query: 303 EAFKQFLVENESVREELVIKLREKL 327
E ++FL+EN +R+E+ K++EKL
Sbjct: 305 ENARKFLLENTDIRDEVEKKIKEKL 329
>gi|336441128|gb|AEI54789.1| recombinase A [Mycobacterium immunogenum]
Length = 346
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/325 (55%), Positives = 247/325 (76%), Gaps = 4/325 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
++ AL+ AL QI SFGKGS+M LG V + + V+ TGS ALD+ALG GGLP+GRV+EI
Sbjct: 7 REKALELALAQIDKSFGKGSVMRLGDEVR-QPISVIPTGSIALDVALGIGGLPRGRVIEI 65
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ALH +A AQR GG FIDAEHALDP A+ +GV T++LL++QPD GEQ
Sbjct: 66 YGPESSGKTTVALHAVANAQRAGGIAAFIDAEHALDPEYAKKLGVDTDSLLVSQPDTGEQ 125
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RSG++D++V+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ +L+
Sbjct: 126 ALEIADMLVRSGAIDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTGALNN 185
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T IFINQ+R K+ FG P E T GG ALKFY+SVRL+++RI +K G E +G++
Sbjct: 186 SGTTAIFINQLREKIGVM-FGSP-ETTTGGKALKFYSSVRLDVRRIETLKDGTEAVGNRT 243
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK++PPFK A+F++ +GKGIS+E +ID+ ++ F K+G+ FTY +GK
Sbjct: 244 RVKVVKNKVSPPFKQAEFDILYGKGISKEGSLIDMGVEQGFIRKSGSWFTYEGEQLGQGK 303
Query: 303 EAFKQFLVENESVREELVIKLREKL 327
E + FL+EN V E+ K++EKL
Sbjct: 304 ENARNFLLENVDVANEVEKKIKEKL 328
>gi|402839509|ref|ZP_10887996.1| RecA protein [Klebsiella sp. OBRC7]
gi|423104449|ref|ZP_17092151.1| protein recA [Klebsiella oxytoca 10-5242]
gi|423125362|ref|ZP_17113041.1| protein recA [Klebsiella oxytoca 10-5250]
gi|376382412|gb|EHS95145.1| protein recA [Klebsiella oxytoca 10-5242]
gi|376398968|gb|EHT11589.1| protein recA [Klebsiella oxytoca 10-5250]
gi|402287783|gb|EJU36213.1| RecA protein [Klebsiella sp. OBRC7]
Length = 352
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 192/346 (55%), Positives = 245/346 (70%), Gaps = 4/346 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV+VVDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+G+ +GS+
Sbjct: 185 QSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKEGDNVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +K K KAGA ++YN D+ +G
Sbjct: 243 TRVKVVKNKIAAPFKQAEFQILYGEGINFYGELVDLGVKEKLIEKAGAWYSYNGDKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEET 347
K +L EN + +E+ K+RE L+ + D +S ET
Sbjct: 303 KANAISWLKENPAAAKEIEKKVRELLLSNQDSTPDFAVDGNSEAET 348
>gi|120403410|ref|YP_953239.1| recombinase A [Mycobacterium vanbaalenii PYR-1]
gi|166220658|sp|A1T7T3.1|RECA_MYCVP RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|119956228|gb|ABM13233.1| recA protein [Mycobacterium vanbaalenii PYR-1]
Length = 350
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/325 (55%), Positives = 247/325 (76%), Gaps = 4/325 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
++ AL+ AL QI +FGKGS+M LG V + + V+ TGS ALD+ALG GGLP+GRVVEI
Sbjct: 8 REKALELALAQIDKNFGKGSVMRLGEEVR-QPIAVIPTGSIALDVALGIGGLPRGRVVEI 66
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ALH +A AQ GG FIDAEHALDP A+ +GV T+ LL++QPD GEQ
Sbjct: 67 YGPESSGKTTVALHAVANAQAAGGIAAFIDAEHALDPDYAQKLGVDTDALLVSQPDTGEQ 126
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D LIRSG++D++V+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ +L+
Sbjct: 127 ALEIADMLIRSGALDILVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTGALNN 186
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T IFINQ+R K+ FG P E T GG ALKFYASVR++++RI +K G + +G++
Sbjct: 187 SGTTAIFINQLREKIGVM-FGSP-ETTTGGKALKFYASVRMDVRRIETLKDGTDAVGNRT 244
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK++PPFK A+F++ +GKGISRE +ID+ ++H F K+G+ FTY+ +GK
Sbjct: 245 RVKVVKNKVSPPFKQAEFDILYGKGISREGSLIDMGVEHGFIRKSGSWFTYDGEQLGQGK 304
Query: 303 EAFKQFLVENESVREELVIKLREKL 327
E + FL++N V E+ K++EKL
Sbjct: 305 ENARNFLLQNVDVANEIEKKIKEKL 329
>gi|172057063|ref|YP_001813523.1| recA protein [Exiguobacterium sibiricum 255-15]
gi|229892799|sp|B1YMB9.1|RECA_EXIS2 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|171989584|gb|ACB60506.1| recA protein [Exiguobacterium sibiricum 255-15]
Length = 347
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/336 (55%), Positives = 249/336 (74%), Gaps = 5/336 (1%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
MS + AL+ AL QI FGKGSIM LG S R V V+S+GS LDIALG GG P+GRV
Sbjct: 1 MSDRKAALEMALRQIEKQFGKGSIMKLGESADQR-VSVISSGSITLDIALGAGGYPRGRV 59
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+E+YGPE+SGKTT++LH IAE Q+QGG FIDAEHALDP+ A +GV + LLL+QPD
Sbjct: 60 IEVYGPESSGKTTVSLHAIAEVQKQGGQAAFIDAEHALDPAYASKLGVNIDELLLSQPDT 119
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + + L+RSG+VD++VVDSVAALVPK E++GEMGD+HM +QARLMSQALRKLS +
Sbjct: 120 GEQALEIAEALVRSGAVDILVVDSVAALVPKAEIEGEMGDSHMGLQARLMSQALRKLSGA 179
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
+ S+TI+IFINQ+R K+ FG P E T GG ALKFY+SVRL ++R +K G + +G
Sbjct: 180 TNKSKTIVIFINQIREKIGVM-FGNP-ETTPGGRALKFYSSVRLEVRRAEALKNGTDIVG 237
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNF 299
++ +K+VKNK+APPFK A+ ++ +G+GIS+ E+IDL K+GA ++YN +R
Sbjct: 238 NRTKLKVVKNKIAPPFKQAEVDIMYGQGISKFGELIDLGTDLDIVQKSGAWYSYNSERLG 297
Query: 300 RGKEAFKQFLVENESVREELVIKLREKL-VVDHKEP 334
+G+E KQ+++E+ V +E+ +RE +VD KEP
Sbjct: 298 QGRENAKQYMIEHPDVADEVERLIREHHGLVDRKEP 333
>gi|148887243|emb|CAM12788.1| recombinase A [Ochrobactrum intermedium]
Length = 299
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 180/299 (60%), Positives = 231/299 (77%), Gaps = 3/299 (1%)
Query: 11 ALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASG 70
AL QI +FGKGSIM LG++ + VSTGS +LDIALG GGLPKGR+VEIYGPE+SG
Sbjct: 3 ALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIVEIYGPESSG 62
Query: 71 KTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSLVDT 130
KTTLALH IAEAQ +GG C F+DAEHALDP A +GV ENLL++QPD GEQAL + DT
Sbjct: 63 KTTLALHTIAEAQXKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQALEITDT 122
Query: 131 LIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIF 190
L+RSG++DV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S S ++IF
Sbjct: 123 LVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISRSNCMVIF 182
Query: 191 INQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVKIVKN 250
INQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+ +E +G+Q VK+VKN
Sbjct: 183 INQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKERDEVVGNQTRVKVVKN 240
Query: 251 KLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGKEAFKQF 308
KLAPPFK +F++ +G G+S+ E++DL +K K+GA F+YN + +G+E KQ+
Sbjct: 241 KLAPPFKQVEFDIMYGAGVSKTGELVDLGVKAGVVEKSGAWFSYNSQRLGQGRENAKQY 299
>gi|86750850|ref|YP_487346.1| recombinase A [Rhodopseudomonas palustris HaA2]
gi|86573878|gb|ABD08435.1| RecA protein [Rhodopseudomonas palustris HaA2]
Length = 364
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/324 (56%), Positives = 241/324 (74%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGS+M LG++ + +S+GS LDIALG GGLPKGRVVEI
Sbjct: 18 KTKALAAALSQIERQFGKGSVMKLGKNDRSMDIETISSGSLGLDIALGVGGLPKGRVVEI 77
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH AEAQ++GG C FIDAEHALDP A +GV + LL++QPD GEQ
Sbjct: 78 YGPESSGKTTLALHCAAEAQKKGGICAFIDAEHALDPVYARKLGVNVDELLISQPDHGEQ 137
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV++VDSVAALVP+ EL+G+MGDA +QARLMSQALRKL+ S++
Sbjct: 138 ALEIADTLVRSGAIDVLIVDSVAALVPRAELEGDMGDALPGLQARLMSQALRKLTASINK 197
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ +G P E T GGNALKFYASVRL+I+RIG +K+ +E +G+Q
Sbjct: 198 SHTMVIFINQIRMKIGVM-YGSP-ETTTGGNALKFYASVRLDIRRIGQIKERDEVVGNQT 255
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G+G+S+ EI+DL +K K+GA F+Y+ + +G+
Sbjct: 256 RVKVVKNKLAPPFKQVEFDIMYGEGVSKMGEILDLGVKAGIVEKSGAWFSYDSQRLGQGR 315
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E K FL N + ++ +R+
Sbjct: 316 ENSKAFLRANPDMTAKIEASIRQN 339
>gi|420151065|ref|ZP_14658215.1| RecA protein [Actinomyces georgiae F0490]
gi|394772829|gb|EJF51746.1| RecA protein [Actinomyces georgiae F0490]
Length = 361
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 184/337 (54%), Positives = 245/337 (72%), Gaps = 4/337 (1%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVV 61
+ ++ ALQ AL QI FGKGS+M LG P V V+ TGS ALD+ALG GGLP+GRV+
Sbjct: 14 NDRNKALQVALSQIDKQFGKGSVMRLGDDSRP-PVQVIPTGSLALDVALGIGGLPRGRVI 72
Query: 62 EIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCG 121
EIYGPE+SGKTT+ALH +A AQ+ GG FIDAEHALDP A +GV T++LL++QPD G
Sbjct: 73 EIYGPESSGKTTVALHAVANAQKAGGNAAFIDAEHALDPVYARALGVDTDSLLVSQPDTG 132
Query: 122 EQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSL 181
EQAL + D LIRSG +D++V+DSVAALVPK E++GEMGD+H+ +QARLMSQALRK++ +L
Sbjct: 133 EQALEIADMLIRSGGIDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITGAL 192
Query: 182 SLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGS 241
S + T IFINQ+R K+ F FG P E T GG ALKFYASVR++++RI +K+ +G+
Sbjct: 193 SATGTTAIFINQLREKIGVF-FGSP-ETTTGGKALKFYASVRIDVRRIETLKEAGAPVGN 250
Query: 242 QIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-R 300
+ K+VKNK+APPFK A+F++ +GKGISRE IID+ + K+G+ FTY D +
Sbjct: 251 RTRAKVVKNKMAPPFKQAEFDIVYGKGISREGSIIDMGVDTGIVRKSGSWFTYGDDQLGQ 310
Query: 301 GKEAFKQFLVENESVREELVIKLREKLVVDHKEPQTA 337
GKE +QFLV+N ++ E+ K+ L + P+ A
Sbjct: 311 GKENVRQFLVDNPALAGEIEQKILVALGIAEAPPEEA 347
>gi|206577023|ref|YP_002236965.1| recombinase A [Klebsiella pneumoniae 342]
gi|288933922|ref|YP_003437981.1| recA protein [Klebsiella variicola At-22]
gi|290510999|ref|ZP_06550368.1| RecA protein [Klebsiella sp. 1_1_55]
gi|226723632|sp|B5XVB6.1|RECA_KLEP3 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|206566081|gb|ACI07857.1| protein RecA [Klebsiella pneumoniae 342]
gi|288888651|gb|ADC56969.1| recA protein [Klebsiella variicola At-22]
gi|289775992|gb|EFD83991.1| RecA protein [Klebsiella sp. 1_1_55]
Length = 352
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 192/346 (55%), Positives = 245/346 (70%), Gaps = 4/346 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV+VVDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+G+ +GS+
Sbjct: 185 QSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKEGDNVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +K K KAGA ++YN D+ +G
Sbjct: 243 TRVKVVKNKIAAPFKQAEFQILYGEGINFFGELVDLGVKEKLIEKAGAWYSYNGDKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEET 347
K +L EN + +E+ K+RE L+ + D + EET
Sbjct: 303 KANAITWLKENPAAAKEIEKKVRELLLNNQDSTPDFAVDGNDAEET 348
>gi|167752109|ref|ZP_02424236.1| hypothetical protein ALIPUT_00351 [Alistipes putredinis DSM 17216]
gi|167660350|gb|EDS04480.1| RecA protein [Alistipes putredinis DSM 17216]
Length = 338
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 178/326 (54%), Positives = 244/326 (74%), Gaps = 4/326 (1%)
Query: 8 LQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPE 67
L +++I FGKGSIM + S V V+ TGS LD+ALG GG PKGRV+EIYGPE
Sbjct: 15 LNAVMEKIEKDFGKGSIMRMS-SAEVADVQVIPTGSITLDMALGVGGYPKGRVIEIYGPE 73
Query: 68 ASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSL 127
+SGKTTLA+H IAEAQ+ GG FIDAEHA D S A+ +GV +NLL++QPD GEQAL +
Sbjct: 74 SSGKTTLAIHAIAEAQKAGGIAAFIDAEHAFDSSYAQQLGVDVDNLLISQPDNGEQALEI 133
Query: 128 VDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTI 187
D+LIRS ++D++V+DSVAAL PK E++GEMGDA M +QARLMSQALRKL+ S+S ++T+
Sbjct: 134 ADSLIRSSAIDIIVIDSVAALTPKAEIEGEMGDAKMGLQARLMSQALRKLTSSISKTKTV 193
Query: 188 LIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVKI 247
IFINQ+R K+ +G P E T GGNALKFYASVR++I+R+ ++K GEE +G++ VK+
Sbjct: 194 CIFINQLRDKIGVV-YGNP-ETTTGGNALKFYASVRIDIRRVSVIKDGEEQLGTRTRVKV 251
Query: 248 VKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGKEAFK 306
VKNK+APPFK A+F++ FG+GIS+ EIIDL + + K+G+ F+Y DR +G+++ K
Sbjct: 252 VKNKVAPPFKKAEFDIMFGEGISKIGEIIDLGVDYGIIKKSGSWFSYGDRKIGQGRDSVK 311
Query: 307 QFLVENESVREELVIKLREKLVVDHK 332
+ L +E++R E+ K+RE ++ K
Sbjct: 312 ELLKNDEALRNEVEAKVREAMIAARK 337
>gi|375142636|ref|YP_005003285.1| protein RecA [Mycobacterium rhodesiae NBB3]
gi|359823257|gb|AEV76070.1| protein RecA [Mycobacterium rhodesiae NBB3]
Length = 354
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/325 (56%), Positives = 246/325 (75%), Gaps = 4/325 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
++ AL+ AL QI +FGKGS+M LG V P + V+ TGS ALD+ALG GGLP+GRVVEI
Sbjct: 8 REKALELALAQIDKNFGKGSVMRLGDEVRP-PISVIPTGSIALDVALGIGGLPRGRVVEI 66
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ALH +A AQ GG FIDAEHALDP A+ +GV T++LL++QPD GEQ
Sbjct: 67 YGPESSGKTTVALHAVANAQAAGGIAAFIDAEHALDPDYAQKLGVDTDSLLVSQPDTGEQ 126
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D LIRSG++D++V+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ +L+
Sbjct: 127 ALEIADMLIRSGALDILVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTGALNN 186
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T IFINQ+R K+ FG P E T GG ALKFYASVRL+++RI +K G + +G++
Sbjct: 187 SGTTAIFINQLREKIGVM-FGSP-ETTTGGKALKFYASVRLDVRRIETLKDGTDAVGNRT 244
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK++PPFK A+F++ +GKGIS+E +ID+ ++ F K+G+ FTY +GK
Sbjct: 245 RVKVVKNKVSPPFKQAEFDILYGKGISKEGSLIDMGVEQGFIRKSGSWFTYEGEQLGQGK 304
Query: 303 EAFKQFLVENESVREELVIKLREKL 327
E + FL+EN V E+ K++EKL
Sbjct: 305 ENARNFLLENPDVANEIEKKIKEKL 329
>gi|260588139|ref|ZP_05854052.1| protein RecA [Blautia hansenii DSM 20583]
gi|331082295|ref|ZP_08331421.1| recA [Lachnospiraceae bacterium 6_1_63FAA]
gi|260541666|gb|EEX22235.1| protein RecA [Blautia hansenii DSM 20583]
gi|330400781|gb|EGG80382.1| recA [Lachnospiraceae bacterium 6_1_63FAA]
Length = 358
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 177/319 (55%), Positives = 245/319 (76%), Gaps = 3/319 (0%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL AL QI FGKGSIM LG S +V V TG+ +LDIALG GG+PKGR++E+YGP
Sbjct: 12 ALDGALAQIEKQFGKGSIMKLGDSTANMNVETVPTGALSLDIALGLGGVPKGRIIEVYGP 71
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTT+ALH++AE Q++GG FIDAEHALDP+ A+ IGV +NL ++QPD GEQAL
Sbjct: 72 ESSGKTTVALHMVAEVQKRGGIAGFIDAEHALDPAYAKNIGVDIDNLYISQPDNGEQALE 131
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ +T++RSG+VD+++VDSVAALVPK E++G+MGD+H+ +QARLMSQALRKL+ +S S
Sbjct: 132 ITETMVRSGAVDIIIVDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKLTAHISKSNC 191
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
I+IFINQ+R K+ FG P EVT GG ALKFY+S+R++++RI +K+G E +G++ +K
Sbjct: 192 IVIFINQLREKVGVM-FGNP-EVTTGGRALKFYSSIRMDVRRIETLKQGGEMVGNRTRIK 249
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGKEAF 305
+VKNK+APPFK A+F++ FG+GIS+E +I+DLA +K+GA + YND +G+E
Sbjct: 250 VVKNKIAPPFKEAEFDIMFGEGISKEGDILDLAANIGIVNKSGAWYAYNDGKIGQGRENA 309
Query: 306 KQFLVENESVREELVIKLR 324
K++L EN + EE+ K+R
Sbjct: 310 KKYLKENPEIAEEIEQKVR 328
>gi|354724865|ref|ZP_09039080.1| recombinase A [Enterobacter mori LMG 25706]
Length = 352
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 192/345 (55%), Positives = 245/345 (71%), Gaps = 4/345 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VEI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVEI 65
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L V+A AQR+G C FIDAEHALDP A +GV +NLL +QPD GEQ
Sbjct: 66 YGPESSGKTTLTLQVVAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGEQ 125
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L RSG+VDV++VDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 126 ALEICDALARSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLKQ 185
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+GE +GS+
Sbjct: 186 SNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKEGENVVGSET 243
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGK 302
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +K K KAGA ++YN D+ +GK
Sbjct: 244 RVKVVKNKIAAPFKQAEFQILYGEGINFLGELVDLGVKEKRIEKAGAWYSYNGDKIGQGK 303
Query: 303 EAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEET 347
+L EN + +E+ K+RE L+ + V D EET
Sbjct: 304 ANAISWLKENPAAAKEIEKKVRELLLNNQDSKPDFVVDAADAEET 348
>gi|109453452|gb|ABG34206.1| RecA [Salmonella enterica subsp. diarizonae]
Length = 353
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 192/347 (55%), Positives = 245/347 (70%), Gaps = 5/347 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV+VVDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALARSGAVDVLVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+G+ +GS+
Sbjct: 185 QSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKEGDNVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +K K KAGA ++YN +G
Sbjct: 243 TRVKVVKNKIAAPFKQAEFQILYGEGINFYGELVDLGVKEKLIEKAGAWYSYNGEKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHK-EPQTAVTDEDSTEET 347
K +L EN + +E+ K+RE L+ + P +V D + ET
Sbjct: 303 KANATTWLKENPATAKEIEKKVRELLLSNQNATPDFSVDDSEGVAET 349
>gi|422412878|ref|ZP_16489837.1| protein RecA, partial [Listeria innocua FSL S4-378]
gi|313619006|gb|EFR90835.1| protein RecA [Listeria innocua FSL S4-378]
Length = 366
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/354 (51%), Positives = 262/354 (74%), Gaps = 12/354 (3%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
++ + AL QAL QI FGKGSIM LG + +++ +S+GS ALDIALG GG P+GR+
Sbjct: 19 VNDRQAALDQALKQIEKQFGKGSIMKLGEH-SDQNISTISSGSLALDIALGVGGYPRGRI 77
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+E+YGPE+SGKTT+ALH IAE Q QGG FIDAEHALDP+ A+ +GV + LLL+QPD
Sbjct: 78 IEVYGPESSGKTTVALHAIAEVQAQGGTAAFIDAEHALDPAYAKNLGVNIDELLLSQPDT 137
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + + L+RSG+VD++V+DSVAALVP+ E++GEMGDAH+ +QARLMSQALRKLS
Sbjct: 138 GEQALEIAEALVRSGAVDMLVIDSVAALVPRAEIEGEMGDAHVGLQARLMSQALRKLSGV 197
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
++ S+TI IFINQ+R K+ FG P E+T GG ALKFY++VRL ++R +K+G + +G
Sbjct: 198 INKSKTIAIFINQIREKVGVM-FGNP-EITPGGRALKFYSTVRLEVRRAEQLKQGTDVMG 255
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF- 299
++ +K+VKNK+APPF+ A+ ++ +G+GISRE E++D+A + +K+G+ ++Y +
Sbjct: 256 NKTKIKVVKNKVAPPFRIAEVDIMYGEGISREGELVDMAAEVDVINKSGSWYSYKEERIG 315
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVD--HKEPQTAVTDEDSTEETVSTI 351
+G+E KQ+L E+ +R+E+ ++RE+ +D +KEP D EET+S +
Sbjct: 316 QGRENAKQYLKEHTDIRDEISKRVREEYEIDGTNKEPL------DENEETLSLL 363
>gi|71066287|ref|YP_265014.1| recombinase A [Psychrobacter arcticus 273-4]
gi|123761733|sp|Q4FQX8.1|RECA_PSYA2 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|71039272|gb|AAZ19580.1| recombinase A [Psychrobacter arcticus 273-4]
Length = 352
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/339 (55%), Positives = 244/339 (71%), Gaps = 6/339 (1%)
Query: 14 QITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASGKTT 73
QI FGK +IM LG V VVSTGS LDIALG GGLPKGR+VEIYGPE+SGKTT
Sbjct: 15 QIEKQFGKNTIMHLGDDSAALDVDVVSTGSLGLDIALGIGGLPKGRIVEIYGPESSGKTT 74
Query: 74 LALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSLVDTLIR 133
+ L IAE Q+QGG C FIDAEHALDP A +GV T++LLL+QPD GEQAL + D L+R
Sbjct: 75 MTLQAIAECQKQGGVCAFIDAEHALDPVYARKLGVNTDDLLLSQPDNGEQALEITDMLVR 134
Query: 134 SGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFINQ 193
SG++D++V+DSVAAL P+ E++GEMGD+HM +QARLMSQALRK++ + S +++FINQ
Sbjct: 135 SGAIDMIVIDSVAALTPRAEIEGEMGDSHMGLQARLMSQALRKITGNAKRSNCMVLFINQ 194
Query: 194 VRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVKIVKNKLA 253
+R K+ FG P E T GGNALKFYASVR++I+RIG VK G+E IG+Q VK++KNK+A
Sbjct: 195 IRMKIGVM-FGSP-ETTTGGNALKFYASVRMDIRRIGAVKNGDEIIGNQTRVKVIKNKMA 252
Query: 254 PPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGKEAFKQFLVEN 312
PPF+ A+FE+ +G+G + +E+IDL ++ KAG+ ++Y D +GK FL EN
Sbjct: 253 PPFRQAEFEITYGEGTNHLAEVIDLGVEIGAVGKAGSWYSYGDEKIGQGKANSVLFLKEN 312
Query: 313 ESVREELVIKLR-EKLVV--DHKEPQTAVTDEDSTEETV 348
++ EE+ K+R EKL V D K A T+E+ E V
Sbjct: 313 PAIAEEIEAKIRAEKLGVKDDSKAAVVAETNEELASEPV 351
>gi|429198541|ref|ZP_19190362.1| RecA protein [Streptomyces ipomoeae 91-03]
gi|428665755|gb|EKX64957.1| RecA protein [Streptomyces ipomoeae 91-03]
Length = 376
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/330 (55%), Positives = 248/330 (75%), Gaps = 6/330 (1%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLG-RSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
+ ++ AL AL QI FGKG++M +G RS P + V+ TGS ALD+ALG GGLP+GRV
Sbjct: 4 TDREKALDAALAQIERQFGKGAVMRMGERSKEP--IEVIPTGSTALDVALGVGGLPRGRV 61
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
VEIYGPE+SGKTTL LH +A AQ+ GG F+DAEHALDP A +GV +NL+L+QPD
Sbjct: 62 VEIYGPESSGKTTLTLHAVANAQKAGGQVAFVDAEHALDPEYARKLGVDIDNLILSQPDN 121
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL +VD L+RSG++D++V+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ +
Sbjct: 122 GEQALEIVDMLVRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITSA 181
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
L+ S+T IFINQ+R K+ FG P E T GG ALKFYASVR++I+RI +K G E +G
Sbjct: 182 LNQSKTTAIFINQLREKIGVM-FGSP-ETTTGGRALKFYASVRIDIRRIETLKDGTEAVG 239
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNF 299
++ K+VKNK+APPFK A+F++ +G+GISRE +ID+ ++H F KAGA +TY D+
Sbjct: 240 NRTRCKVVKNKVAPPFKQAEFDILYGQGISREGGLIDMGVEHGFVRKAGAWYTYEGDQLG 299
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVV 329
+GKE + FL +N + E+ K++EKL V
Sbjct: 300 QGKENARNFLKDNPDLANEIEKKIKEKLGV 329
>gi|449471972|ref|XP_004153457.1| PREDICTED: protein RecA-like [Cucumis sativus]
Length = 352
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/346 (55%), Positives = 245/346 (70%), Gaps = 4/346 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L V+A AQR+G C FIDAEHALDP A +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVVAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV++VDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALARSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+G+ +GS+
Sbjct: 185 QSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKEGDNVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +K K KAGA ++YN D+ +G
Sbjct: 243 TRVKVVKNKIAAPFKQAEFQILYGEGINFLGELVDLGVKEKLIEKAGAWYSYNGDKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEET 347
K +L EN + +E+ K+RE L+ + V D EET
Sbjct: 303 KANAISWLKENPAAAKEIEKKVRELLLSNQDSKPDFVVDGADAEET 348
>gi|25991661|gb|AAN76871.1| RecA [Burkholderia ambifaria]
Length = 336
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/337 (55%), Positives = 244/337 (72%), Gaps = 4/337 (1%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL AL QI FGKGSIM +G ++ VVSTGS LDIALG GGLP+GRVVEIYGP
Sbjct: 1 ALAAALAQIEKQFGKGSIMRMGDGEVAENIQVVSTGSLGLDIALGVGGLPRGRVVEIYGP 60
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTTL L V+AE Q+ GG FIDAEHALD A +GV LL++QPD GEQAL
Sbjct: 61 ESSGKTTLTLQVVAELQKLGGTAAFIDAEHALDVQYAAKVGVNVPELLISQPDTGEQALE 120
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ D L+RSGS+D++V+DSVAALVPK E++GEMGD+ +QARLMSQALRKL+ ++ +
Sbjct: 121 ITDALVRSGSIDMIVIDSVAALVPKAEIEGEMGDSLPGLQARLMSQALRKLTGTIKRTNC 180
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
++IFINQ+R K+ FG P E T GGNALKFY+SVRL+I+RIG +KK +E IG++ VK
Sbjct: 181 LVIFINQIRMKIGVM-FGNP-ETTTGGNALKFYSSVRLDIRRIGSIKKNDEVIGNETRVK 238
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGKEAF 305
+VKNK++PPF+ A F++ +G+GISR+ EIIDL ++ K KAGA ++YN +GK+
Sbjct: 239 VVKNKVSPPFREAIFDILYGEGISRQGEIIDLGVQAKIVDKAGAWYSYNGEKIGQGKDNA 298
Query: 306 KQFLVENESVREELVIKLREKL-VVDHKEPQTAVTDE 341
++FL EN + E+ ++RE L VV E AV DE
Sbjct: 299 REFLRENPEIAREIENRIRESLGVVTMPEGAAAVHDE 335
>gi|302554574|ref|ZP_07306916.1| recA protein [Streptomyces viridochromogenes DSM 40736]
gi|302472192|gb|EFL35285.1| recA protein [Streptomyces viridochromogenes DSM 40736]
Length = 374
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/330 (55%), Positives = 250/330 (75%), Gaps = 6/330 (1%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLG-RSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
+ ++ AL AL QI FGKG++M +G R+ P + V+STGS ALD+ALG GGLP+GRV
Sbjct: 4 TDREKALDAALAQIERQFGKGAVMRMGDRTNEP--IEVISTGSTALDVALGVGGLPRGRV 61
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
VEIYGPE+SGKTTL LH +A AQ+ GG F+DAEHALDP A+ +GV +NL+L+QPD
Sbjct: 62 VEIYGPESSGKTTLTLHAVANAQKAGGQVAFVDAEHALDPEYAKKLGVDIDNLILSQPDN 121
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL +VD L+RSG++D++V+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ +
Sbjct: 122 GEQALEIVDMLVRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITSA 181
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
L+ S+T IFINQ+R K+ FG P E T GG ALKFYASVR++I+RI +K G E +G
Sbjct: 182 LNQSKTTAIFINQLREKIGVM-FGSP-ETTTGGRALKFYASVRIDIRRIETLKDGTEAVG 239
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNF 299
++ K+VKNK+APPFK A+F++ +G+GISRE +ID+ ++H F KAGA +TY D+
Sbjct: 240 NRTRCKVVKNKVAPPFKQAEFDILYGQGISREGGLIDMGVEHGFVRKAGAWYTYEGDQLG 299
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVV 329
+GKE + FL +N + E+ K++EKL V
Sbjct: 300 QGKENARNFLKDNPDLANEIEKKIKEKLGV 329
>gi|421852716|ref|ZP_16285401.1| DNA recombinase RecA [Acetobacter pasteurianus subsp. pasteurianus
LMG 1262 = NBRC 106471]
gi|371479047|dbj|GAB30604.1| DNA recombinase RecA [Acetobacter pasteurianus subsp. pasteurianus
LMG 1262 = NBRC 106471]
Length = 344
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/321 (56%), Positives = 247/321 (76%), Gaps = 6/321 (1%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPR-HVPVVSTGSFALDIALGTGGLPKGRVVEIYG 65
AL+ AL QI +FGKGS+M LG+ P+ V+ TGS LDIALG GGLP+GRVVEIYG
Sbjct: 9 ALEGALGQIERAFGKGSVMRLGQR--PKVEADVIPTGSLGLDIALGIGGLPRGRVVEIYG 66
Query: 66 PEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQAL 125
PE+SGKTTLALH IAEAQ++ G C FIDAEHALDPS A+ +GV +NLL++QPD GEQAL
Sbjct: 67 PESSGKTTLALHAIAEAQKRDGTCAFIDAEHALDPSYAKKLGVDVDNLLISQPDTGEQAL 126
Query: 126 SLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQ 185
+ DTL+RSG++DV+VVDSVAALVP+ EL+G+MGD+H+ + ARLMSQALRKL+ +++ S
Sbjct: 127 EIADTLVRSGAIDVLVVDSVAALVPRAELEGDMGDSHVGLHARLMSQALRKLTGTVARSN 186
Query: 186 TILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAV 245
T++IF+NQ+R K+ FG P E T GGNALKFY+SVR++I+RIG +K +E G+Q V
Sbjct: 187 TLMIFLNQIRLKIGVM-FGNP-ETTTGGNALKFYSSVRMDIRRIGSIKDKDEVTGNQTRV 244
Query: 246 KIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGKEA 304
K+VKNK+APPF+ +F++ +G+GIS+ E+IDL +K K+GA F+Y+ + +G+E
Sbjct: 245 KVVKNKMAPPFRQVEFDIMYGEGISKVGELIDLGVKAGVVEKSGAWFSYDSQRIGQGREN 304
Query: 305 FKQFLVENESVREELVIKLRE 325
KQFL ++ + ++ ++RE
Sbjct: 305 AKQFLRDHPEMAADIERRVRE 325
>gi|146312815|ref|YP_001177889.1| recombinase A [Enterobacter sp. 638]
gi|166918711|sp|A4WDQ8.1|RECA_ENT38 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|145319691|gb|ABP61838.1| RecA protein [Enterobacter sp. 638]
Length = 352
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 196/353 (55%), Positives = 245/353 (69%), Gaps = 8/353 (2%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GRVVE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRVVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIASAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV+VVDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK G+ IGS+
Sbjct: 185 QSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKDGDNVIGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +K K KAGA ++YN +G
Sbjct: 243 TRVKVVKNKIAAPFKQAEFQILYGEGINFFGELVDLGVKEKLIEKAGAWYSYNGEKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETVSTISPD 354
K +L EN + +E+ K+RE L+ + V D EET +PD
Sbjct: 303 KANAISWLKENPAAAKEIEKKVRELLLNNEDSKPDFVVDAADAEET----NPD 351
>gi|108759616|ref|YP_629645.1| recA protein [Myxococcus xanthus DK 1622]
gi|108463496|gb|ABF88681.1| recA protein [Myxococcus xanthus DK 1622]
Length = 363
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 185/348 (53%), Positives = 256/348 (73%), Gaps = 7/348 (2%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTP--RHVPVVSTGSFALDIALGTGGLPKGRV 60
+K+ A++ A+ + FGKGSIM LG P R V + TGS +LDIALG GG+PKGR+
Sbjct: 6 EKEKAIELAMSAVERQFGKGSIMRLGND-EPMMRDVQAIPTGSISLDIALGVGGVPKGRI 64
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+EI+GPE+SGKTTL LH++AEAQ++GG C ++DAEHALD A +GV+T++LLL+QPD
Sbjct: 65 IEIFGPESSGKTTLCLHIVAEAQKRGGICGYVDAEHALDVGYARKLGVRTDDLLLSQPDT 124
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + + L+RSG++DV+VVDSVAALVPK EL+GEMGDAHM +QARLMSQALRKL+ +
Sbjct: 125 GEQALEIAEMLVRSGAIDVLVVDSVAALVPKAELEGEMGDAHMGVQARLMSQALRKLTGT 184
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
++ SQT +IFINQ+R K+ FG P E T GGNALKFYAS RL+I+RIG +K G+ +G
Sbjct: 185 IAKSQTCVIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASQRLDIRRIGAIKNGDNVVG 242
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNF 299
S+ VK+VKNK+APPFK +F++ +G GISRE ++IDLA K+G+ F++N +R
Sbjct: 243 SRTRVKVVKNKVAPPFKEVEFDIMYGTGISREGDLIDLASNENIVEKSGSWFSFNGERIG 302
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVDHK-EPQTAVTDEDSTEE 346
+G+E K++L E+ + +++ ++ EK + P A DE + E
Sbjct: 303 QGRENVKEYLREHPEIAKDIEGRVLEKYGIGKSGAPVAAAPDESAPAE 350
>gi|262376180|ref|ZP_06069410.1| recA protein [Acinetobacter lwoffii SH145]
gi|262308781|gb|EEY89914.1| recA protein [Acinetobacter lwoffii SH145]
Length = 347
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 189/355 (53%), Positives = 253/355 (71%), Gaps = 14/355 (3%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K+ AL AL QI FGK ++M LG + T + V VSTGS LDIALG GGLPKGR+VEI
Sbjct: 5 KNKALNAALSQIEKQFGKNTVMRLGDN-TVQAVEAVSTGSLTLDIALGIGGLPKGRIVEI 63
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ L IAE Q+ GG C FIDAEHALDP A +GV +NLL++QPD GEQ
Sbjct: 64 YGPESSGKTTMTLQAIAECQKAGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDHGEQ 123
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RSG++D++VVDSVAAL P+ E++GEMGD+HM +QARLMSQALRK++ +
Sbjct: 124 ALEIADMLVRSGAIDMIVVDSVAALTPRAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 183
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+G+E +GS+
Sbjct: 184 SNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGQVKEGDEIVGSET 241
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGK 302
VK+VKNK+APPFK A F++ +GKG++ E+IDLA++ + KAGA ++Y D+ +GK
Sbjct: 242 KVKVVKNKMAPPFKEALFQILYGKGVNHLGELIDLAVQQEIVQKAGAWYSYQGDKIGQGK 301
Query: 303 EAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETVSTISPDSTD 357
++L E++ + + + EKL+ D + V +ED ++E PD D
Sbjct: 302 NNTIRYLEEHKEMAQTI-----EKLIRDQLLTKAVVVEEDDSKE-----EPDFLD 346
>gi|254461098|ref|ZP_05074514.1| protein RecA [Rhodobacterales bacterium HTCC2083]
gi|206677687|gb|EDZ42174.1| protein RecA [Rhodobacteraceae bacterium HTCC2083]
Length = 351
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 185/344 (53%), Positives = 245/344 (71%), Gaps = 3/344 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGSIM LG + + STGS LDIALG GGLPKGR+VEI
Sbjct: 9 KQKALDSALAQIERQFGKGSIMKLGDENAVQQIEATSTGSLGLDIALGIGGLPKGRIVEI 68
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL LH +AE Q++GG C F+DAEHALDP A+ +GV + LL++QPD GEQ
Sbjct: 69 YGPESSGKTTLTLHTVAEEQKKGGVCAFVDAEHALDPQYAKKLGVDLDELLISQPDTGEQ 128
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL +VDTL+RSG+V+++VVDSVAAL PK EL+G+MGD+ + + ARLMSQA+RKL+ S+S
Sbjct: 129 ALEIVDTLVRSGAVNMIVVDSVAALTPKSELEGDMGDSSVGVHARLMSQAMRKLTGSISR 188
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFY+SVRL+I+RIG +K +E +G+
Sbjct: 189 SNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYSSVRLDIRRIGALKDRDEVVGNAT 246
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYND-RNFRGK 302
VK+VKNK+APPFK +F++ +G+GIS+ E++DL +K K+G+ F+Y D R +G+
Sbjct: 247 RVKVVKNKVAPPFKQVEFDIMYGEGISKMGELLDLGVKAGIVDKSGSWFSYGDERIGQGR 306
Query: 303 EAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEE 346
E K FL EN + E+ K+R +D P+ D+D E
Sbjct: 307 ENAKTFLKENTRISYEIEDKIRAAHGLDFDMPKEEQKDDDDILE 350
>gi|294631803|ref|ZP_06710363.1| RecA protein [Streptomyces sp. e14]
gi|292835136|gb|EFF93485.1| RecA protein [Streptomyces sp. e14]
Length = 375
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/330 (55%), Positives = 248/330 (75%), Gaps = 6/330 (1%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLG-RSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
+ ++ AL AL QI FGKG++M +G RS P + V+ TGS ALD+ALG GGLP+GRV
Sbjct: 4 TDREKALDAALAQIERQFGKGAVMRMGERSKEP--IEVIPTGSTALDVALGVGGLPRGRV 61
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
VEIYGPE+SGKTTL LH +A AQ+ GG F+DAEHALDP A +GV +NL+L+QPD
Sbjct: 62 VEIYGPESSGKTTLTLHAVANAQKAGGQVAFVDAEHALDPEYARKLGVDIDNLILSQPDN 121
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL +VD L+RSG++D++V+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ +
Sbjct: 122 GEQALEIVDMLVRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITSA 181
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
L+ S+T IFINQ+R K+ FG P E T GG ALKFYASVR++I+RI +K G E +G
Sbjct: 182 LNQSKTTAIFINQLREKIGVM-FGSP-ETTTGGRALKFYASVRIDIRRIETLKDGTEAVG 239
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNF 299
++ K+VKNK+APPFK A+F++ +G+GISRE +ID+ ++H F KAGA +TY D+
Sbjct: 240 NRTRCKVVKNKVAPPFKQAEFDILYGQGISREGGLIDMGVEHGFVRKAGAWYTYEGDQLG 299
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVV 329
+GKE + FL +N + E+ K++EKL V
Sbjct: 300 QGKENARNFLKDNPDLANEIERKIKEKLGV 329
>gi|295097278|emb|CBK86368.1| RecA protein [Enterobacter cloacae subsp. cloacae NCTC 9394]
Length = 352
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/346 (55%), Positives = 245/346 (70%), Gaps = 4/346 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L V+A AQR+G C FIDAEHALDP A +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVVAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV++VDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALARSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+G+ +GS+
Sbjct: 185 QSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKEGDNVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +K K KAGA ++YN D+ +G
Sbjct: 243 TRVKVVKNKIAAPFKQAEFQILYGEGINFLGELVDLGVKEKLIEKAGAWYSYNGDKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEET 347
K +L EN + +E+ K+RE L+ + V D EET
Sbjct: 303 KANAISWLKENPAAAKEIEKKVRELLLNNQDSKPDFVVDGADAEET 348
>gi|289578367|ref|YP_003476994.1| recA protein [Thermoanaerobacter italicus Ab9]
gi|297544644|ref|YP_003676946.1| recA protein [Thermoanaerobacter mathranii subsp. mathranii str.
A3]
gi|289528080|gb|ADD02432.1| recA protein [Thermoanaerobacter italicus Ab9]
gi|296842419|gb|ADH60935.1| recA protein [Thermoanaerobacter mathranii subsp. mathranii str.
A3]
Length = 341
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/328 (55%), Positives = 248/328 (75%), Gaps = 4/328 (1%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
M +K AL+ A+ QI FGKGSIM LG + +V V+ TGS LDIALG GG+P+GR+
Sbjct: 1 MIEKQKALEMAISQIERQFGKGSIMRLGDTAK-LNVEVIPTGSLELDIALGVGGVPRGRI 59
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+EI+GPE+SGKTTLALH+IAEAQ+ GG FIDAEHALDP A+ +GV E+LL+AQPD
Sbjct: 60 IEIFGPESSGKTTLALHMIAEAQKMGGTGAFIDAEHALDPVYAKNLGVNIEDLLVAQPDT 119
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + + L+RSG+VD++V+DSVAALVPK E+DGEMGD+H+ +QARLMSQALRKL+
Sbjct: 120 GEQALEIAEALVRSGAVDIIVIDSVAALVPKAEIDGEMGDSHVGLQARLMSQALRKLAGV 179
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
S S+TI++FINQ+R K+ FG P E T GG ALKFYA++RL+++++ +K+G E +G
Sbjct: 180 TSKSKTIVVFINQLREKVGIM-FGNP-ETTPGGRALKFYATIRLDVRKVDPIKQGNEIVG 237
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYND-RNF 299
++ VK+VKNK+APPFK A+F++ +G+GISRE I+D+ K+GA ++Y D R
Sbjct: 238 NRTRVKVVKNKVAPPFKQAEFDIMYGEGISREGSILDIGTSIDIIEKSGAWYSYGDIRLG 297
Query: 300 RGKEAFKQFLVENESVREELVIKLREKL 327
+G+E KQFL EN+ + +E+ K+RE
Sbjct: 298 QGRENAKQFLKENKEIADEIERKIRENF 325
>gi|393762775|ref|ZP_10351401.1| recombinase A [Alishewanella agri BL06]
gi|392606397|gb|EIW89282.1| recombinase A [Alishewanella agri BL06]
Length = 348
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/341 (56%), Positives = 245/341 (71%), Gaps = 7/341 (2%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG S T + VSTGS LDIALG GGLP GR+VE
Sbjct: 4 NKQKALSAALSQIERQFGKGSIMRLGDS-TALDIEAVSTGSLGLDIALGIGGLPYGRIVE 62
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIAEAQR G C FIDAEHALDP A+ +GV + LL++QPD GE
Sbjct: 63 IYGPESSGKTTLTLQVIAEAQRSGKTCAFIDAEHALDPVYAKKLGVDVDKLLVSQPDTGE 122
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L+RS +VDVV+VDSVAAL PK E++G+MGD+HM +QARLMSQALRKL+ ++
Sbjct: 123 QALEICDMLVRSAAVDVVIVDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTANIK 182
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+ IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+G+E G++
Sbjct: 183 RSNTLCIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGSVKEGDEITGNE 240
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK+VKNK+APPFK A+F +++G GI++ E+IDL ++ K+GA + Y +G
Sbjct: 241 TRVKVVKNKVAPPFKQAEFIIQYGAGINKLGELIDLGVQQGLVDKSGAWYAYQGNKIGQG 300
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDED 342
K +FL +N +V +E+ +LR +L++ +P AV +D
Sbjct: 301 KANAMKFLQDNPAVADEIEKELRARLLL---KPGEAVATDD 338
>gi|297191664|ref|ZP_06909062.1| recombinase A [Streptomyces pristinaespiralis ATCC 25486]
gi|197721599|gb|EDY65507.1| recombinase A [Streptomyces pristinaespiralis ATCC 25486]
Length = 375
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/337 (55%), Positives = 253/337 (75%), Gaps = 7/337 (2%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLG-RSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
+ ++ AL AL QI FGKG++M LG R P + V+ TGS ALD+ALG GGLP+GRV
Sbjct: 4 TDREKALDAALAQIERQFGKGAVMRLGERPNEP--IEVIPTGSTALDVALGVGGLPRGRV 61
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
VE+YGPE+SGKTTL LH +A AQ+ GG F+DAEHALDP A+ +GV +NL+L+QPD
Sbjct: 62 VEVYGPESSGKTTLTLHAVANAQKAGGAVAFVDAEHALDPEYAKKLGVDIDNLILSQPDN 121
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL +VD L+RSG++D++V+DSVAALVPK E++GEMGD+H+ +QARLMSQALRK++ +
Sbjct: 122 GEQALEIVDMLVRSGALDLIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITSA 181
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
L+ S+T IFINQ+R K+ FG P E T GG ALKFYASVRL+I+RI +K G + +G
Sbjct: 182 LNQSKTTAIFINQLREKIGVM-FGSP-ETTTGGRALKFYASVRLDIRRIETLKDGTDAVG 239
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNF 299
++ VK+VKNK+APPFK A+F++ +G+GISRE +ID+ ++H F KAGA +TY D+
Sbjct: 240 NRTRVKVVKNKVAPPFKQAEFDILYGQGISREGGLIDMGVEHGFVRKAGAWYTYEGDQLG 299
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVDHKEPQT 336
+GKE + FL +N + E+ K++EKL V + P+T
Sbjct: 300 QGKENARNFLKDNPDLANEIEKKIKEKLGVGVR-PET 335
>gi|54633822|gb|AAV36021.1| RecA [Burkholderia sp. KBC-5]
Length = 336
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/337 (55%), Positives = 244/337 (72%), Gaps = 4/337 (1%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL AL QI FGKGSIM +G ++ VVSTGS LDIALG GGLP+GRVVEIYGP
Sbjct: 1 ALAAALAQIEKQFGKGSIMRMGDGEVAENIQVVSTGSLGLDIALGVGGLPRGRVVEIYGP 60
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTTL L V+AE Q+ GG FIDAEHALD A +GV LL++QPD GEQAL
Sbjct: 61 ESSGKTTLTLQVVAELQKLGGTAAFIDAEHALDVQYAAKLGVNVPELLISQPDTGEQALE 120
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ D L+RSGS+D++V+DSVAALVPK E++GEMGD+ +QARLMSQALRKL+ ++ +
Sbjct: 121 ITDALVRSGSIDMIVIDSVAALVPKAEIEGEMGDSLPGLQARLMSQALRKLTGTIKRTNC 180
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
++IFINQ+R K+ FG P E T GGNALKFY+SVRL+I+RIG +KK +E IG++ VK
Sbjct: 181 LVIFINQIRMKIGVM-FGNP-ETTTGGNALKFYSSVRLDIRRIGSIKKNDEVIGNETRVK 238
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGKEAF 305
+VKNK++PPF+ A F++ +G+GISR+ EIIDL ++ K KAGA ++YN +GK+
Sbjct: 239 VVKNKVSPPFREAIFDILYGEGISRQGEIIDLGVQAKIVDKAGAWYSYNGEKIGQGKDNA 298
Query: 306 KQFLVENESVREELVIKLREKL-VVDHKEPQTAVTDE 341
++FL EN + E+ ++RE L VV E AV DE
Sbjct: 299 REFLRENPEIAREIENRIRESLGVVTMPEGAAAVYDE 335
>gi|260437155|ref|ZP_05790971.1| protein RecA [Butyrivibrio crossotus DSM 2876]
gi|292810467|gb|EFF69672.1| protein RecA [Butyrivibrio crossotus DSM 2876]
Length = 343
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/345 (53%), Positives = 251/345 (72%), Gaps = 6/345 (1%)
Query: 1 MSKKD--LALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKG 58
M+K+D AL AL I SFGKG++M LG +V V TGS +LDIALG GG+PKG
Sbjct: 1 MAKEDKLRALDAALSSIERSFGKGAVMKLGDPAAAMNVETVPTGSLSLDIALGMGGVPKG 60
Query: 59 RVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQP 118
R+VEIYGPE+SGKTT+ALH++AE Q++GG FIDAEHALDP A IGV + L ++QP
Sbjct: 61 RIVEIYGPESSGKTTVALHMVAEVQKRGGIAGFIDAEHALDPVYARNIGVNIDELYISQP 120
Query: 119 DCGEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLS 178
D GEQAL + +TL+RSG+VD+++VDSVAALVPK E+DG+MGD+H+ +QARLMSQALRKL+
Sbjct: 121 DNGEQALEITETLVRSGAVDIIIVDSVAALVPKAEIDGDMGDSHVGLQARLMSQALRKLT 180
Query: 179 HSLSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEET 238
+S + I+IFINQ+R K+ FG P E T GG ALKFY+S+R++++RI +K E
Sbjct: 181 AVISKTNCIVIFINQLREKVGVM-FGNP-ETTTGGRALKFYSSIRMDVRRIESLKANGEV 238
Query: 239 IGSQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DR 297
+G++ VK+VKNK+APPF+ A+F++ FGKGISRE +I+DL + K+GA F YN D+
Sbjct: 239 VGNRTRVKVVKNKIAPPFREAEFDIMFGKGISREGDILDLGVTSNVVQKSGAWFAYNGDK 298
Query: 298 NFRGKEAFKQFLVENESVREELVIKLREKLVVD-HKEPQTAVTDE 341
+G+E K +L E+ + EE+ K+RE VD E +T T+E
Sbjct: 299 IGQGRENAKIYLSEHPDIMEEIEQKVREHFAVDVSHEDETVTTEE 343
>gi|150390420|ref|YP_001320469.1| recA protein [Alkaliphilus metalliredigens QYMF]
gi|149950282|gb|ABR48810.1| recA protein [Alkaliphilus metalliredigens QYMF]
Length = 347
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 185/326 (56%), Positives = 245/326 (75%), Gaps = 5/326 (1%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
M KK AL A+ QI FGKGSIM LG + + +STGS LD+A+G GG+P+GRV
Sbjct: 1 MEKKK-ALDVAISQIEKQFGKGSIMKLGED-SKLSLECISTGSIDLDVAIGIGGVPRGRV 58
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
VEIYGPE+SGKTT++LH+IAEAQ+ GG FIDAEHALDP A +GV TENL+++QPD
Sbjct: 59 VEIYGPESSGKTTVSLHIIAEAQKNGGSAAFIDAEHALDPIYARKLGVDTENLIVSQPDT 118
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + + L+RSG++DV+VVDSVAALVPK E++GEMGD+HM +QARLMSQALRKLS S
Sbjct: 119 GEQALEIAEALVRSGAIDVIVVDSVAALVPKAEIEGEMGDSHMGLQARLMSQALRKLSGS 178
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
++ S T IFINQ+R K+ FG P E T GG ALKFYASVRL+++RI ++K+G + IG
Sbjct: 179 INKSNTTAIFINQLREKIGVM-FGNP-ETTTGGRALKFYASVRLDVRRIDVIKQGNDIIG 236
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF- 299
++ VK+VKNK+APPFK A+F++ +G+GIS+ +++D+A + KAGA ++Y D
Sbjct: 237 NRTRVKVVKNKIAPPFKQAEFDIMYGEGISKTGDVLDVASNLEIIKKAGAWYSYGDHRLG 296
Query: 300 RGKEAFKQFLVENESVREELVIKLRE 325
+G+E KQFL EN + E+ K+RE
Sbjct: 297 QGRENSKQFLKENPDIFLEVENKIRE 322
>gi|329114759|ref|ZP_08243516.1| Protein RecA [Acetobacter pomorum DM001]
gi|326695890|gb|EGE47574.1| Protein RecA [Acetobacter pomorum DM001]
Length = 367
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 180/321 (56%), Positives = 247/321 (76%), Gaps = 6/321 (1%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPR-HVPVVSTGSFALDIALGTGGLPKGRVVEIYG 65
AL+ AL QI +FGKGS+M LG+ P+ V+ TGS LDIALG GGLP+GRVVEIYG
Sbjct: 32 ALEGALGQIERAFGKGSVMRLGQR--PKVEADVIPTGSLGLDIALGIGGLPRGRVVEIYG 89
Query: 66 PEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQAL 125
PE+SGKTTLALH IAEAQ++GG C FIDAEHALDP A+ +GV +NLL++QPD GEQAL
Sbjct: 90 PESSGKTTLALHAIAEAQKRGGTCAFIDAEHALDPGYAKKLGVDVDNLLISQPDAGEQAL 149
Query: 126 SLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQ 185
+ DTL+RSG++DV+VVDSVAALVP+ EL+G+MGD+H+ + ARLMSQALRKL+ +++ S
Sbjct: 150 EIADTLVRSGAIDVLVVDSVAALVPRAELEGDMGDSHVGLHARLMSQALRKLTGTVARSN 209
Query: 186 TILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAV 245
T++IF+NQ+R K+ FG P E T GGNALKFY+SVR++I+RIG +K +E G+Q V
Sbjct: 210 TLMIFLNQIRLKIGVM-FGNP-ETTTGGNALKFYSSVRMDIRRIGSIKDKDEVTGNQTRV 267
Query: 246 KIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGKEA 304
K+VKNK+APPF+ +F++ +G+GIS+ E+IDL +K K+G+ F+Y+ + +G+E
Sbjct: 268 KVVKNKMAPPFRQVEFDIMYGEGISKVGELIDLGVKAGVVEKSGSWFSYDSQRIGQGREN 327
Query: 305 FKQFLVENESVREELVIKLRE 325
KQFL ++ + ++ ++RE
Sbjct: 328 AKQFLRDHPEMAADIERRVRE 348
>gi|311030057|ref|ZP_07708147.1| recombinase A [Bacillus sp. m3-13]
Length = 346
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 185/349 (53%), Positives = 254/349 (72%), Gaps = 6/349 (1%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
MS + AL AL QI FGKGSIM LG T R + + +GS ALD+ALG GG P+GRV
Sbjct: 1 MSDRKAALDMALKQIEKQFGKGSIMKLGEQ-TERKISTIPSGSLALDVALGAGGYPRGRV 59
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
VEIYGPE+SGKTT+ALH IAE Q+QGG FIDAEHALDP A+ +GV + LLL+QPD
Sbjct: 60 VEIYGPESSGKTTVALHAIAEVQQQGGQAAFIDAEHALDPVYAQKLGVNIDELLLSQPDT 119
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + + L+RSG+VD++VVDSVAALVPK E++GEMGD+H+ +QARLMSQALRKLS +
Sbjct: 120 GEQALEIAEALVRSGAVDIIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLSGA 179
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
++ S+TI IFINQ+R K+ FG P E T GG ALKFY+SVRL ++R +K+G + +G
Sbjct: 180 INKSKTIAIFINQIREKVGVM-FGNP-ETTPGGRALKFYSSVRLEVRRAEQLKQGHDIVG 237
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF- 299
++ +K+VKNK+APPFK A+ ++ +G+GISRE E+ID+ K+G+ ++YN+
Sbjct: 238 NKTKIKVVKNKIAPPFKVAEVDIMYGEGISREGEVIDMGSDLDIVQKSGSWYSYNEERLG 297
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETV 348
+G+E KQFL EN+ + +E+ ++R+ +D + TA +E+ +E +
Sbjct: 298 QGRENAKQFLKENKDILKEIHQQIRDHHGLD--KDLTAPAEEEMDQEEL 344
>gi|365824587|ref|ZP_09366661.1| recA [Actinomyces graevenitzii C83]
gi|365259647|gb|EHM89632.1| recA [Actinomyces graevenitzii C83]
Length = 394
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 185/324 (57%), Positives = 241/324 (74%), Gaps = 4/324 (1%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL AL QI +FGKGS+M LG P V V+ TGS ALD+ALG GGLP+GRVVEIYGP
Sbjct: 12 ALSLALAQIDKNFGKGSVMRLGDDTRP-PVAVIPTGSVALDVALGVGGLPRGRVVEIYGP 70
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTT+ALH +A AQ+ GG FIDAEHALDP A +GV +NLL++QPD GEQAL
Sbjct: 71 ESSGKTTVALHAVANAQKAGGNAAFIDAEHALDPEYARKLGVDVDNLLVSQPDTGEQALE 130
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ D LIRSG +D++V+DSVAALVPK E+DGEMGD+H+ +QARLMSQALRK++ +LS + T
Sbjct: 131 IADMLIRSGGLDIIVIDSVAALVPKAEIDGEMGDSHVGLQARLMSQALRKITGALSATGT 190
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
IFINQ+R K+ F FG P E T GG ALKFYASVR++I+RIG +K G++T+G++ VK
Sbjct: 191 TAIFINQLREKIGVF-FGSP-ETTTGGKALKFYASVRIDIRRIGALKDGDQTVGNRTKVK 248
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGKEAF 305
+VKNK+APPFK A+F++ +G+GISRE ++DL + K+GA +TY D+ +GKE
Sbjct: 249 VVKNKMAPPFKVAEFDILYGEGISREGGLLDLGVDTGVVRKSGAWYTYGTDQLGQGKENS 308
Query: 306 KQFLVENESVREELVIKLREKLVV 329
+ FL +N + E+ K+ L V
Sbjct: 309 RNFLKDNPQLAAEIEEKILAALGV 332
>gi|283786754|ref|YP_003366619.1| RecA protein (recombinase A) [Citrobacter rodentium ICC168]
gi|282950208|emb|CBG89844.1| RecA protein (recombinase A) [Citrobacter rodentium ICC168]
Length = 353
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 192/347 (55%), Positives = 245/347 (70%), Gaps = 5/347 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV+VVDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+G+ +GS+
Sbjct: 185 QSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKEGDNVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +K K KAGA ++YN +G
Sbjct: 243 TRVKVVKNKIAAPFKQAEFQILYGEGINFYGELVDLGVKEKLIEKAGAWYSYNGEKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKE-PQTAVTDEDSTEET 347
K +L EN + +E+ K+RE L+ + P +V D + ET
Sbjct: 303 KANATTWLKENPATAKEIEKKVRELLLNNQDSTPDFSVDDGEGVAET 349
>gi|146308037|ref|YP_001188502.1| recombinase A [Pseudomonas mendocina ymp]
gi|145576238|gb|ABP85770.1| RecA protein [Pseudomonas mendocina ymp]
Length = 347
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/328 (55%), Positives = 241/328 (73%), Gaps = 4/328 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKG++M +G + +P +STGS LDIALG GGLPKGR+VE
Sbjct: 4 NKKRALAAALGQIEKQFGKGAVMRMGDH-ERQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIAEAQ+ G C F+DAEHALDP A +GV ++LL++QPD GE
Sbjct: 63 IYGPESSGKTTLTLSVIAEAQKNGATCAFVDAEHALDPDYAGKLGVNVDDLLVSQPDTGE 122
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L+RS ++DV++VDSVAALVPK E++GEMGD H+ +QARLMSQALRK++ ++
Sbjct: 123 QALEITDMLVRSNAIDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ ++IFINQ+R K+ FG P E T GGNALKFY+SVRL+I+R G VK+GEE +GS+
Sbjct: 183 NANCLVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYSSVRLDIRRTGAVKEGEEVVGSE 240
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VKIVKNK+APPF+ A+F++ +GKGI R EIIDL ++ K+GA ++Y +G
Sbjct: 241 TRVKIVKNKVAPPFRQAEFQILYGKGIYRNGEIIDLGVQQGLVEKSGAWYSYQGNKIGQG 300
Query: 302 KEAFKQFLVENESVREELVIKLREKLVV 329
K +FL +N +V E+ ++REKL+V
Sbjct: 301 KANAAKFLEDNPAVAREIEGQIREKLLV 328
>gi|111225078|ref|YP_715872.1| recombinase A [Frankia alni ACN14a]
gi|123142675|sp|Q0RDW5.1|RECA_FRAAA RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|111152610|emb|CAJ64351.1| DNA strand exchange and recombination protein with protease and
nuclease activity [Frankia alni ACN14a]
Length = 346
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/325 (55%), Positives = 243/325 (74%), Gaps = 4/325 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
+D AL AL QI +FGKGS+M LG P + + TGS ALD+ALG GGLPKGRV+EI
Sbjct: 7 RDKALDNALAQIDKAFGKGSVMRLGDDTRP-PIQAIPTGSIALDVALGIGGLPKGRVIEI 65
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ALH +A AQ GG FIDAEHALDP A +GV +NLL++QPD GEQ
Sbjct: 66 YGPESSGKTTVALHAVANAQAAGGIAAFIDAEHALDPEYAGKLGVDIDNLLVSQPDTGEQ 125
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RSG++D++V+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ +L+
Sbjct: 126 ALEIADMLVRSGALDIIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTAALAN 185
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T IFINQ+R K+ FG P E T GG ALKFYASVRL+++RI +K G E +G++
Sbjct: 186 SGTTAIFINQLREKIGVM-FGSP-ETTTGGKALKFYASVRLDVRRIETLKDGTEAVGNRT 243
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGK 302
VK+VKNK+APPF+TA+F++ +G GISRE +ID+ ++H K+GA +TY+ D+ +GK
Sbjct: 244 RVKVVKNKVAPPFRTAEFDIVYGGGISREGSLIDMGVEHGIIRKSGAWYTYDGDQLGQGK 303
Query: 303 EAFKQFLVENESVREELVIKLREKL 327
E + FL +N + E+ K++EKL
Sbjct: 304 ENARSFLRDNPDLANEIEKKIKEKL 328
>gi|197124458|ref|YP_002136409.1| recA protein [Anaeromyxobacter sp. K]
gi|196174307|gb|ACG75280.1| recA protein [Anaeromyxobacter sp. K]
Length = 358
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/334 (55%), Positives = 251/334 (75%), Gaps = 5/334 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGR-SVTPRHVPVVSTGSFALDIALGTGGLPKGRVV 61
+K+ A++ A+ I +FGKGSIM LG + V VSTG+ +LDIALG GG P+GR++
Sbjct: 6 EKEKAIELAVASIEKAFGKGSIMRLGNEDALVKDVQAVSTGAVSLDIALGVGGFPRGRII 65
Query: 62 EIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCG 121
EIYGPE+SGKTTLALH IAEAQR+GG F+DAEHALD A +GV+T++LL++QPD G
Sbjct: 66 EIYGPESSGKTTLALHAIAEAQRRGGIAAFVDAEHALDVGYARKLGVRTDDLLISQPDSG 125
Query: 122 EQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSL 181
EQAL +V+TL+RSG++DV+VVDSVAALVPK EL+GEMGDAHM +QARLMSQALRKL+ ++
Sbjct: 126 EQALEIVETLVRSGAIDVLVVDSVAALVPKAELEGEMGDAHMGVQARLMSQALRKLTGTI 185
Query: 182 SLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGS 241
S S TI+IFINQ+R K+ FG P E T GGNALKFYAS RL+I+RIG +K G+ IG+
Sbjct: 186 SKSATIVIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASQRLDIRRIGAIKDGDSVIGN 243
Query: 242 QIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFR 300
+ VK+VKNK+APPFK +F++ +G+GISRE +++DLA K+G F++ +R +
Sbjct: 244 RTRVKVVKNKVAPPFKEVEFDIMYGQGISREGDVLDLASNENIVEKSGTWFSFGGERIGQ 303
Query: 301 GKEAFKQFLVENESVREELVIKLREKLVVDHKEP 334
G+E K F E+ + +++ +L EK + H+ P
Sbjct: 304 GREQAKAFFREHPEILQQIESRLFEKFGI-HRGP 336
>gi|417315667|ref|ZP_12102342.1| recombinase A [Listeria monocytogenes J1816]
gi|328466107|gb|EGF37274.1| recombinase A [Listeria monocytogenes J1816]
Length = 348
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 178/337 (52%), Positives = 256/337 (75%), Gaps = 6/337 (1%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
M+ + AL QAL QI FGKGSIM LG + +++ +S+GS ALDIALG GG P+GR+
Sbjct: 1 MNDRQAALDQALKQIEKQFGKGSIMKLGEH-SDQNISTISSGSLALDIALGVGGYPRGRI 59
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+E+YGPE+SGKTT+ALH IAE Q QGG FIDAEHALDP+ A+ +GV + LLL+QPD
Sbjct: 60 IEVYGPESSGKTTVALHAIAEVQAQGGTAAFIDAEHALDPAYAKNLGVNIDELLLSQPDT 119
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + + L+RSG+VD++V+DSVAALVP+ E++GEMGDAH+ +QARLMSQALRKLS
Sbjct: 120 GEQALEIAEALVRSGAVDMLVIDSVAALVPRAEIEGEMGDAHVGLQARLMSQALRKLSGV 179
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
++ S+TI IFINQ+R K+ FG P E+T GG ALKFY++VRL ++R +K+G + +G
Sbjct: 180 INKSKTIAIFINQIREKVGVM-FGNP-EITPGGRALKFYSTVRLEVRRAEQLKQGTDVMG 237
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNF 299
++ +K+VKNK+APPF+ A+ ++ +G+GISRE E++D+A + +K+G+ ++Y +R
Sbjct: 238 NKTKIKVVKNKVAPPFRIAEVDIMYGEGISREGELVDMAAEVDVINKSGSWYSYKEERIG 297
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVD--HKEP 334
+G+E KQ+L E+ +R+E+ ++RE+ +D +KEP
Sbjct: 298 QGRENAKQYLKEHTDIRDEISKRVREEYEIDGSNKEP 334
>gi|293192297|ref|ZP_06609408.1| protein RecA [Actinomyces odontolyticus F0309]
gi|399526449|ref|ZP_10766228.1| RecA protein [Actinomyces sp. ICM39]
gi|292820212|gb|EFF79206.1| protein RecA [Actinomyces odontolyticus F0309]
gi|398363067|gb|EJN46717.1| RecA protein [Actinomyces sp. ICM39]
Length = 363
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/354 (52%), Positives = 249/354 (70%), Gaps = 10/354 (2%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVV 61
+ ++ AL+ AL QI FGKGS+M LG P V V+ TGS ALD+ALG GGLP+GRV+
Sbjct: 14 NDRNKALEVALSQIDKQFGKGSVMRLGDDNRP-PVQVIPTGSLALDVALGIGGLPRGRVI 72
Query: 62 EIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCG 121
E+YGPE+SGKTT+ALH +A AQ+ GG FIDAEHALDP A +GV T++LL++QPD G
Sbjct: 73 EVYGPESSGKTTVALHAVANAQKAGGNAAFIDAEHALDPVYARALGVDTDSLLVSQPDTG 132
Query: 122 EQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSL 181
EQAL + D LIRSG +D++V+DSVAALVPK E++GEMGD+H+ +QARLMSQALRK++ +L
Sbjct: 133 EQALEIADMLIRSGGIDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITGAL 192
Query: 182 SLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGS 241
S + T IFINQ+R K+ F FG P E T GG ALKFYASVR++++RI +K+ +G+
Sbjct: 193 SATGTTAIFINQLREKIGVF-FGSP-ETTTGGKALKFYASVRIDVRRIETLKEAGAPVGN 250
Query: 242 QIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-R 300
+ K+VKNK+APPFK A+F++ +GKGISRE IID+ ++ K+G+ FTY D +
Sbjct: 251 RTRAKVVKNKMAPPFKQAEFDIVYGKGISREGSIIDMGVEAGIVRKSGSWFTYGDDQLGQ 310
Query: 301 GKEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETVSTISPD 354
GKE +QFLV+N + E+ K+ L + D D + V I PD
Sbjct: 311 GKENVRQFLVDNPELANEIEQKILVSLGIGE------APDPDQASQDVPDIDPD 358
>gi|120554998|ref|YP_959349.1| recombinase A [Marinobacter aquaeolei VT8]
gi|387813632|ref|YP_005429114.1| recombinase A [Marinobacter hydrocarbonoclasticus ATCC 49840]
gi|166220655|sp|A1U2E3.1|RECA_MARAV RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|120324847|gb|ABM19162.1| recA protein [Marinobacter aquaeolei VT8]
gi|302608138|emb|CBW44418.1| DNA strand exchange and recombination protein with protease and
nuclease activity [Marinobacter hydrocarbonoclasticus
ATCC 49840]
gi|381338644|emb|CCG94691.1| DNA strand exchange and recombination protein with protease and
nuclease activity [Marinobacter hydrocarbonoclasticus
ATCC 49840]
Length = 347
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/333 (54%), Positives = 246/333 (73%), Gaps = 6/333 (1%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRH-VPVVSTGSFALDIALGTGGLPKGRVVEIYG 65
AL AL QI FGKG++M +G PR +P VSTGS LD+ALG GGLP GR+VEIYG
Sbjct: 8 ALGAALSQIERQFGKGAVMKMGDQ--PREAIPAVSTGSLGLDVALGIGGLPYGRIVEIYG 65
Query: 66 PEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQAL 125
PE+SGKTTL L VIAEAQ+QG C F+DAEHALDP AE +GV + LL++QPD GEQAL
Sbjct: 66 PESSGKTTLTLQVIAEAQKQGKTCAFVDAEHALDPVYAEKLGVNVDELLVSQPDTGEQAL 125
Query: 126 SLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQ 185
+ D L+RS +VDV++VDSVAAL PK E++GEMGD+H+ +QARLMSQALRKL+ ++ +
Sbjct: 126 EIADMLVRSNAVDVIIVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTGNVKHAN 185
Query: 186 TILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAV 245
+++FINQ+R K+ FG P E T GGNALKFY+SVRL+I+RIG VK G+E +G++ V
Sbjct: 186 CLMVFINQIRMKIGVM-FGSP-ETTTGGNALKFYSSVRLDIRRIGSVKDGDEVVGNETRV 243
Query: 246 KIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGKEA 304
K+VKNK++PPF+ A+F++ +GKGI +E++D+ +K F K+GA + YN D+ +GK
Sbjct: 244 KVVKNKVSPPFRQAEFQIMYGKGIYHMAEVLDMGVKEGFVDKSGAWYAYNGDKIGQGKAN 303
Query: 305 FKQFLVENESVREELVIKLREKLVVDHKEPQTA 337
+FL EN + E+ K+R+KL+ + +TA
Sbjct: 304 ACKFLEENLDIANEIEAKVRDKLMPKPVKKETA 336
>gi|440229530|ref|YP_007343323.1| protein RecA [Serratia marcescens FGI94]
gi|440051235|gb|AGB81138.1| protein RecA [Serratia marcescens FGI94]
Length = 350
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 185/317 (58%), Positives = 235/317 (74%), Gaps = 4/317 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A+ +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPVYAKKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV++VDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+G+E +GS+
Sbjct: 185 NANTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAIKEGDEVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+ E+IDL +KHK KAGA ++YN D+ +G
Sbjct: 243 TRVKVVKNKVAAPFKQAEFQIMYGEGINSRGELIDLGVKHKMIEKAGAWYSYNGDKIGQG 302
Query: 302 KEAFKQFLVENESVREE 318
K FL EN ++ E
Sbjct: 303 KANACNFLKENPAIAAE 319
>gi|398336966|ref|ZP_10521671.1| recombinase A [Leptospira kmetyi serovar Malaysia str. Bejo-Iso9]
Length = 365
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/338 (54%), Positives = 250/338 (73%), Gaps = 8/338 (2%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K LA++QA+ QI FGKG+IM LG + V V+ TGS LDIALG GG P GR+VEI
Sbjct: 20 KKLAIEQAMSQIEKQFGKGAIMKLGSDAAKQTVQVIPTGSLDLDIALGIGGYPIGRIVEI 79
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L IAEAQ++GG FIDAEHALDPS A+ +GV + LL++QPD GE+
Sbjct: 80 YGPESSGKTTLTLSAIAEAQKRGGVAAFIDAEHALDPSYAKKLGVNIDELLVSQPDNGEE 139
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + ++L+RS ++D++V+DSVAALVPK E++G+MGD+HM +QARLMSQALRKL+ +++
Sbjct: 140 ALEICESLVRSNAIDLIVIDSVAALVPKAEIEGDMGDSHMGLQARLMSQALRKLTGTIAK 199
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+T++IFINQ+R K+ FG P E T GGNALKFY SVRL+I++I +K+ EE++G+++
Sbjct: 200 SKTVVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYCSVRLDIRKIETLKEKEESVGNRV 257
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK APPFK A+F++ F GISRE ++DL +KH +KAGA ++YN +GK
Sbjct: 258 RVKVVKNKCAPPFKQAEFDIIFNAGISREGSLVDLGVKHDIINKAGAWYSYNTEKIGQGK 317
Query: 303 EAFKQFLVENESVR---EELVIKLRE--KLVVDHKEPQ 335
EA K++L N + E +V L L D+K+P+
Sbjct: 318 EAAKEYLKNNPEIAFTIENMVRDLNSLPLLAQDNKKPR 355
>gi|416894095|ref|ZP_11924905.1| recombinase A [Aggregatibacter aphrophilus ATCC 33389]
gi|347813564|gb|EGY30230.1| recombinase A [Aggregatibacter aphrophilus ATCC 33389]
Length = 353
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 190/353 (53%), Positives = 255/353 (72%), Gaps = 8/353 (2%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
+K AL+ AL QI FGKG+IM LG S + +STGSF LD+ALG GGLP GR+VE
Sbjct: 6 EKQKALEAALGQIEKQFGKGAIMKLGDS-QKLDIEAISTGSFGLDLALGIGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
I+GPE+SGKTTL L VIAEAQ+ G C FIDAEHALDP A +GV + LL++QPD GE
Sbjct: 65 IFGPESSGKTTLTLSVIAEAQKAGKTCAFIDAEHALDPIYASKLGVDVKELLVSQPDNGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L+RSG+VDV++VDSVAAL PK E++G+MGD+H+ +QARLMSQALRKL+ +
Sbjct: 125 QALEICDALVRSGAVDVIIVDSVAALTPKAEIEGDMGDSHVGLQARLMSQALRKLTGQIK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+R+G +K+G+E IG++
Sbjct: 185 NANCLVIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRVGSIKEGDEVIGNE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRG 301
VK+VKNK+APPF+ F++ +G+GIS+ESE+IDL +KHK SKAGA + Y N++ +G
Sbjct: 243 TRVKVVKNKVAPPFRQVDFQILYGEGISKESELIDLGVKHKLISKAGAWYAYQNEKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETVSTISPD 354
K ++L +N + + LR++L+ P++A+T DS E I D
Sbjct: 303 KTNAMKWLKDNPEQAKIIESTLRDELLA---HPESAIT-ADSDNEAQGNIESD 351
>gi|260554248|ref|ZP_05826501.1| RecA/RadA recombinase [Acinetobacter sp. RUH2624]
gi|424055351|ref|ZP_17792874.1| protein recA [Acinetobacter nosocomialis Ab22222]
gi|425741964|ref|ZP_18860089.1| RecA protein [Acinetobacter baumannii WC-487]
gi|260404628|gb|EEW98145.1| RecA/RadA recombinase [Acinetobacter sp. RUH2624]
gi|407438546|gb|EKF45089.1| protein recA [Acinetobacter nosocomialis Ab22222]
gi|425489173|gb|EKU55486.1| RecA protein [Acinetobacter baumannii WC-487]
Length = 350
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/341 (53%), Positives = 244/341 (71%), Gaps = 4/341 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K ALQ AL QI FGK ++M LG + T + V VSTGS LDIALG GGLPKGR++E
Sbjct: 4 NKSKALQAALSQIEKQFGKNTVMRLGDN-TVQAVEAVSTGSLTLDIALGIGGLPKGRIIE 62
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTT+ L IA+ Q+ GG C FIDAEHALDP A +GV +NLL++QPD GE
Sbjct: 63 IYGPESSGKTTMTLQAIAQCQKSGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDNGE 122
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L+RSG++D++VVDSVAAL PK E++GEMGD+HM +QARLMSQALRK++ +
Sbjct: 123 QALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAK 182
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+G+E +GS+
Sbjct: 183 RSNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGQVKEGDEIVGSE 240
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK+VKNK+APPF+ A F++ +GKG ++ E++DLA++ KAGA ++Y +G
Sbjct: 241 TKVKVVKNKMAPPFREAIFQILYGKGTNQLGELVDLAVQQDIVQKAGAWYSYQGNKIGQG 300
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDED 342
K ++ EN+ + EE+ +RE+L+ + D++
Sbjct: 301 KNNVIRYFEENKHIAEEIERNIREQLLTTGTNGTVQIEDDE 341
>gi|441508291|ref|ZP_20990215.1| protein RecA [Gordonia aichiensis NBRC 108223]
gi|441447319|dbj|GAC48176.1| protein RecA [Gordonia aichiensis NBRC 108223]
Length = 347
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/325 (55%), Positives = 248/325 (76%), Gaps = 4/325 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
++ AL AL QI +FGKGS+M LG + + + V+ TGS ALD+ALG GGLP+GRV+EI
Sbjct: 8 REKALDLALAQIDKNFGKGSVMRLGEE-SRQPIEVIPTGSIALDVALGIGGLPRGRVIEI 66
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ALH +A AQ GG FIDAEHALDP A +GV T+ LL++QPD GEQ
Sbjct: 67 YGPESSGKTTVALHAVANAQAAGGIAAFIDAEHALDPDYAAKLGVDTDALLVSQPDTGEQ 126
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D LIRSG++D++V+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ +LS
Sbjct: 127 ALEIADMLIRSGALDILVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTSALSS 186
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+T IFINQ+R K+ FG P E T GG ALKFY+SVRL+++RI +K G E +G++
Sbjct: 187 SKTTAIFINQLREKIGVM-FGSP-ETTTGGKALKFYSSVRLDVRRIETLKDGTEAVGNRT 244
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRGK 302
VK+VKNK+APPFK A+F++ +G+GIS+E +ID+ + F K+G+ FTY D+ +GK
Sbjct: 245 RVKVVKNKVAPPFKQAEFDILYGQGISKEGSLIDMGVAEGFIRKSGSWFTYEGDQLGQGK 304
Query: 303 EAFKQFLVENESVREELVIKLREKL 327
E ++FL+EN +R+E+ K++EKL
Sbjct: 305 ENARKFLLENTDIRDEVEKKIKEKL 329
>gi|359772894|ref|ZP_09276307.1| protein RecA [Gordonia effusa NBRC 100432]
gi|359309884|dbj|GAB19085.1| protein RecA [Gordonia effusa NBRC 100432]
Length = 347
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/325 (56%), Positives = 246/325 (75%), Gaps = 4/325 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
++ AL AL QI +FGKGS+M LG T + + V+ TG+ ALDIALG GGLP+GRVVEI
Sbjct: 8 REKALDLALAQIDKNFGKGSVMRLGEE-TRQPIEVIPTGAIALDIALGIGGLPRGRVVEI 66
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ALH +A AQ QGG FIDAEHALDP A +GV + LL++QPD GEQ
Sbjct: 67 YGPESSGKTTVALHAVANAQAQGGIAAFIDAEHALDPEYATKLGVDVDALLVSQPDTGEQ 126
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D LIRSG++D++V+DSVAALVPK E++GEMGD+H+ +QARLMSQALRK++ +LS
Sbjct: 127 ALEIADMLIRSGALDILVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKMTGALSN 186
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T +FINQ+R K+ FG P E T GG ALKFY+SVRL+++RI +K G + +G++
Sbjct: 187 SNTTAVFINQLREKIGVM-FGSP-ETTTGGKALKFYSSVRLDVRRIETLKDGTDAVGNRT 244
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRGK 302
VK+VKNK+APPFK A+F++ +G GIS+E +IDL + F K+G+ FTY D+ +GK
Sbjct: 245 RVKVVKNKVAPPFKQAEFDILYGHGISKEGSLIDLGVSEGFIRKSGSWFTYEGDQLGQGK 304
Query: 303 EAFKQFLVENESVREELVIKLREKL 327
E ++FL+EN +R+E+ K++EKL
Sbjct: 305 ENARKFLLENTDIRDEIEKKIKEKL 329
>gi|295836173|ref|ZP_06823106.1| conserved hypothetical protein [Streptomyces sp. SPB74]
gi|197695273|gb|EDY42206.1| conserved hypothetical protein [Streptomyces sp. SPB74]
Length = 377
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 189/352 (53%), Positives = 258/352 (73%), Gaps = 7/352 (1%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLG-RSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
+ ++ AL AL QI FGKG++M +G R P + V+ TGS ALDIALG GG+P+GRV
Sbjct: 4 TDREKALDAALAQIERQFGKGAVMRMGERPNEP--IEVIPTGSTALDIALGVGGIPRGRV 61
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
VE+YGPE+SGKTTL LH +A AQ+ GG FIDAEHALDP A +GV +NL+L+QPD
Sbjct: 62 VEVYGPESSGKTTLTLHAVANAQKAGGSVAFIDAEHALDPEYARKLGVDVDNLILSQPDN 121
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL +VD L+RSG++D++V+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ +
Sbjct: 122 GEQALEIVDMLVRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITSA 181
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
L+ S+T IFINQ+R K+ FG P E T GG ALKFYASVR++I+RI +K G + +G
Sbjct: 182 LNQSKTTAIFINQLREKIGVM-FGSP-ETTTGGRALKFYASVRIDIRRIETLKDGTDAVG 239
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNF 299
++ KIVKNK+APPFK A+F++ +G+GISRE +ID+ ++H F KAGA +TY D+
Sbjct: 240 NRTRCKIVKNKVAPPFKQAEFDILYGQGISREGGLIDMGVEHGFVRKAGAWYTYEGDQLG 299
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVDHK-EPQTAVTDEDSTEETVST 350
+GKE + FL +N + +E+ K++EKL V K E + + +TEET T
Sbjct: 300 QGKENARNFLKDNPDLADEIERKIKEKLGVGVKPEKEKPEGEPVATEETAET 351
>gi|344924247|ref|ZP_08777708.1| recombination protein [Candidatus Odyssella thessalonicensis L13]
gi|297717870|gb|ADI50078.1| RecA protein [Candidatus Odyssella thessalonicensis L13]
Length = 349
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/347 (52%), Positives = 249/347 (71%), Gaps = 6/347 (1%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVV 61
+ K AL AL QI +FGKGS+M LG+ T + +S+GS LDIALG GG P+GR++
Sbjct: 4 ADKGKALDAALSQIERAFGKGSVMRLGQRETV-EIEALSSGSLGLDIALGIGGFPRGRII 62
Query: 62 EIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCG 121
EIYGPE+SGKTTLALH +AEAQ+ GG C F+DAEHALDPS A +GV +NL+++QPD G
Sbjct: 63 EIYGPESSGKTTLALHAVAEAQKVGGTCAFVDAEHALDPSYARKLGVNIDNLIISQPDTG 122
Query: 122 EQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSL 181
EQAL + DTL+RSG++DV++VDSVAALVPK EL+G+MGD+HM +QARLMSQALRKL+ S+
Sbjct: 123 EQALEIADTLVRSGAIDVLIVDSVAALVPKAELEGDMGDSHMGLQARLMSQALRKLAGSI 182
Query: 182 SLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGS 241
+ + ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K ++ G+
Sbjct: 183 NKTNCMVIFINQIRQKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGSIKDKDQVTGN 240
Query: 242 QIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-R 300
Q VK+VKNK+APPFK F++ +G+G+S+ E+IDL + KAG+ ++ + +
Sbjct: 241 QTRVKVVKNKMAPPFKVVDFDIMYGEGVSKTGELIDLGVSAGVVEKAGSWYSMGSQRIGQ 300
Query: 301 GKEAFKQFLVENESVREELVIKLREK--LVVDHKEPQTAVTDEDSTE 345
GKEA +QFL +N + ++ +R L+ D+ + ED +
Sbjct: 301 GKEAARQFLRDNPDIANQIETAIRNNAGLLSDNMMRGSESNSEDEAD 347
>gi|442318417|ref|YP_007358438.1| recA protein [Myxococcus stipitatus DSM 14675]
gi|441486059|gb|AGC42754.1| recA protein [Myxococcus stipitatus DSM 14675]
Length = 362
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/331 (55%), Positives = 249/331 (75%), Gaps = 6/331 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTP--RHVPVVSTGSFALDIALGTGGLPKGRV 60
+K+ A++ A+ + FGKGSIM LG P R V +STGS +LDIALG GG+PKGR+
Sbjct: 6 EKEKAIELAMSAVERQFGKGSIMRLGND-EPLMRDVQAISTGSISLDIALGVGGVPKGRI 64
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+EI+GPE+SGKTTL LH++AEAQ++GG C ++DAEHALD A +GV+T++LLL+QPD
Sbjct: 65 IEIFGPESSGKTTLCLHIVAEAQKRGGICGYVDAEHALDVGYARKLGVRTDDLLLSQPDT 124
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + + L+RSG++DV+VVDSVAALVPK EL+GEMGDAHM +QARLMSQALRKL+ +
Sbjct: 125 GEQALEIAEMLVRSGAIDVLVVDSVAALVPKAELEGEMGDAHMGVQARLMSQALRKLTGT 184
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
++ SQT +IFINQ+R K+ FG P E T GGNALKFYAS RL+I+RIG +K GE +G
Sbjct: 185 IAKSQTCVIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASQRLDIRRIGAIKNGENVVG 242
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNF 299
S+ VK+VKNK+APPFK +F++ +G GISRE ++IDLA K+G+ F++N +R
Sbjct: 243 SRTRVKVVKNKVAPPFKEVEFDIMYGTGISREGDLIDLASNDNIVEKSGSWFSFNGERIG 302
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVD 330
+G+E K +L E+ V + ++ EK ++
Sbjct: 303 QGRENAKDYLKEHPEVSRAIEAQVLEKYGIN 333
>gi|345019814|ref|ZP_08783427.1| recombinase A [Ornithinibacillus scapharcae TW25]
Length = 346
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 190/349 (54%), Positives = 251/349 (71%), Gaps = 6/349 (1%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
MS + AL AL QI FGKGSIM LG + + + S+GS ALDIALG GG PKGR+
Sbjct: 1 MSDRKQALDMALKQIEKQFGKGSIMKLGENAGQK-IETTSSGSLALDIALGIGGYPKGRI 59
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+EIYGPE+SGKTT+ALH IAEAQ+QGG FIDAEHALDP+ A +GV + LLL+QPD
Sbjct: 60 IEIYGPESSGKTTVALHAIAEAQKQGGQAAFIDAEHALDPTYARALGVNIDELLLSQPDT 119
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + + L+RSG+VDV+VVDSVAALVPK E++GEMGD+HM +QARLMSQALRKLS +
Sbjct: 120 GEQALEIAEALVRSGAVDVLVVDSVAALVPKAEIEGEMGDSHMGLQARLMSQALRKLSGA 179
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
++ S+T IFINQVR K+ FG P E T GG ALKFY+SVRL ++R +K+G E IG
Sbjct: 180 INKSKTTAIFINQVREKIGVM-FGNP-ETTPGGRALKFYSSVRLEVRRAETLKQGNEMIG 237
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNF 299
++ +K+VKNK+APPFKTA+ ++ +G+GIS E EI+D+ K+GA + Y +R
Sbjct: 238 NRAKIKVVKNKVAPPFKTAEVDIMYGEGISIEGEILDIGSDLDIVQKSGAWYAYQGERLG 297
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETV 348
+G+E K+FL EN + E+ +R+ +D A +E++T+ET+
Sbjct: 298 QGRENAKEFLKENPEIMSEVHQAIRDHYGLDGS--VDATVEEEATQETL 344
>gi|315648061|ref|ZP_07901162.1| recA protein [Paenibacillus vortex V453]
gi|315276707|gb|EFU40050.1| recA protein [Paenibacillus vortex V453]
Length = 353
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/349 (53%), Positives = 252/349 (72%), Gaps = 6/349 (1%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
MS + AL+ AL QI FGKGSIM LG S T V +V +GS ALDIALGTGGLPKGR+
Sbjct: 1 MSDRRAALEMALRQIEKQFGKGSIMKLGES-THMQVEIVPSGSLALDIALGTGGLPKGRI 59
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+E+YGPE+SGKTT+ALH IAE Q+ GG FIDAEHALDPS A +GV + LLL+QPD
Sbjct: 60 IEVYGPESSGKTTVALHAIAEVQKAGGQAAFIDAEHALDPSYASKLGVNIDELLLSQPDT 119
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQ L + + L+RSG+VD++V+DSVAALVPK E++G+MGD+H+ +QARLMSQALRKLS +
Sbjct: 120 GEQGLEIAEALVRSGAVDIIVIDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKLSGA 179
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
++ S+TI IFINQ+R K+ FG P E T GG ALKFY++VRL+++RI +K G + +G
Sbjct: 180 INKSKTITIFINQLREKVGVM-FGNP-ETTPGGRALKFYSTVRLDVRRIESIKMGNDVVG 237
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNF 299
++ +K+VKNK+APPFK A+ ++ +G+GISRE +ID+ + K+GA ++Y+ DR
Sbjct: 238 NRTRIKVVKNKVAPPFKQAELDIMYGEGISREGSLIDIGTELDIVDKSGAWYSYSGDRLG 297
Query: 300 RGKEAFKQFLVENESVREELVIKLRE--KLVVDHKEPQTAVTDEDSTEE 346
+G+E KQFL E+ + + K+RE L EP ++D EE
Sbjct: 298 QGRENAKQFLKEHPEIASVIENKIREASNLTTAVPEPSAEDKEQDEIEE 346
>gi|25991655|gb|AAN76868.1| RecA [Burkholderia ambifaria]
gi|25991657|gb|AAN76869.1| RecA [Burkholderia cepacia]
gi|25991659|gb|AAN76870.1| RecA [Burkholderia ambifaria]
gi|25991663|gb|AAN76872.1| RecA [Burkholderia ambifaria]
gi|54633824|gb|AAV36022.1| RecA [Burkholderia sp. KBC-6]
gi|54633826|gb|AAV36023.1| RecA [Burkholderia sp. KBC-7]
Length = 336
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/337 (55%), Positives = 244/337 (72%), Gaps = 4/337 (1%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL AL QI FGKGSIM +G ++ VVSTGS LDIALG GGLP+GRVVEIYGP
Sbjct: 1 ALAAALAQIEKQFGKGSIMRMGDGEVAENIQVVSTGSLGLDIALGVGGLPRGRVVEIYGP 60
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTTL L V+AE Q+ GG FIDAEHALD A +GV LL++QPD GEQAL
Sbjct: 61 ESSGKTTLTLQVVAELQKLGGTAAFIDAEHALDVQYAAKLGVNVPELLISQPDTGEQALE 120
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ D L+RSGS+D++V+DSVAALVPK E++GEMGD+ +QARLMSQALRKL+ ++ +
Sbjct: 121 ITDALVRSGSIDMIVIDSVAALVPKAEIEGEMGDSLPGLQARLMSQALRKLTGTIKRTNC 180
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
++IFINQ+R K+ FG P E T GGNALKFY+SVRL+I+RIG +KK +E IG++ VK
Sbjct: 181 LVIFINQIRMKIGVM-FGNP-ETTTGGNALKFYSSVRLDIRRIGSIKKNDEVIGNETRVK 238
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGKEAF 305
+VKNK++PPF+ A F++ +G+GISR+ EIIDL ++ K KAGA ++YN +GK+
Sbjct: 239 VVKNKVSPPFREAIFDILYGEGISRQGEIIDLGVQAKIVDKAGAWYSYNGEKIGQGKDNA 298
Query: 306 KQFLVENESVREELVIKLREKL-VVDHKEPQTAVTDE 341
++FL EN + E+ ++RE L VV E AV DE
Sbjct: 299 REFLRENPEIAREIENRIRESLGVVTMPEGAAAVHDE 335
>gi|334125328|ref|ZP_08499317.1| recombination protein A [Enterobacter hormaechei ATCC 49162]
gi|333386791|gb|EGK57995.1| recombination protein A [Enterobacter hormaechei ATCC 49162]
Length = 357
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/346 (55%), Positives = 245/346 (70%), Gaps = 4/346 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 11 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 69
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L V+A AQR+G C FIDAEHALDP A +GV +NLL +QPD GE
Sbjct: 70 IYGPESSGKTTLTLQVVAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGE 129
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV++VDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 130 QALEICDALARSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 189
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+G+ +GS+
Sbjct: 190 QSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKEGDNVVGSE 247
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +K K KAGA ++YN D+ +G
Sbjct: 248 TRVKVVKNKIAAPFKQAEFQILYGEGINFLGELVDLGVKEKLIEKAGAWYSYNGDKIGQG 307
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEET 347
K +L EN + +E+ K+RE L+ + V D EET
Sbjct: 308 KANAISWLKENPAAAKEIEKKVRELLLNNQDSKPDFVVDGADAEET 353
>gi|270264043|ref|ZP_06192311.1| DNA integration/recombination/invertion protein [Serratia odorifera
4Rx13]
gi|333925648|ref|YP_004499227.1| protein recA [Serratia sp. AS12]
gi|333930601|ref|YP_004504179.1| recombinase A [Serratia plymuthica AS9]
gi|386327472|ref|YP_006023642.1| protein recA [Serratia sp. AS13]
gi|386823225|ref|ZP_10110380.1| recombinase A [Serratia plymuthica PRI-2C]
gi|421781727|ref|ZP_16218192.1| protein RecA [Serratia plymuthica A30]
gi|270042236|gb|EFA15332.1| DNA integration/recombination/invertion protein [Serratia odorifera
4Rx13]
gi|333472208|gb|AEF43918.1| Protein recA [Serratia plymuthica AS9]
gi|333489708|gb|AEF48870.1| Protein recA [Serratia sp. AS12]
gi|333959805|gb|AEG26578.1| Protein recA [Serratia sp. AS13]
gi|386380012|gb|EIJ20794.1| recombinase A [Serratia plymuthica PRI-2C]
gi|407756293|gb|EKF66411.1| protein RecA [Serratia plymuthica A30]
Length = 354
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/317 (58%), Positives = 235/317 (74%), Gaps = 4/317 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A+ +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV++VDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+G+E +GS+
Sbjct: 185 NANTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKEGDEVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +KHK KAGA ++YN D+ +G
Sbjct: 243 TRVKVVKNKIAAPFKQAEFQILYGEGINSRGELVDLGVKHKMIEKAGAWYSYNGDKIGQG 302
Query: 302 KEAFKQFLVENESVREE 318
K FL EN +V E
Sbjct: 303 KANACNFLKENPAVAAE 319
>gi|395765153|ref|ZP_10445769.1| protein recA [Bartonella sp. DB5-6]
gi|395413006|gb|EJF79485.1| protein recA [Bartonella sp. DB5-6]
Length = 347
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/324 (57%), Positives = 238/324 (73%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI SFGKGSIM LG+ + + TGS +LDIALG GGLPKGR+VEI
Sbjct: 3 KTKALDAALSQIERSFGKGSIMRLGQKEQVVEIETIPTGSLSLDIALGVGGLPKGRIVEI 62
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH IAEAQ+ GG C FIDAEHALDP A +GV ENL ++QPD GEQ
Sbjct: 63 YGPESSGKTTLALHAIAEAQKIGGICAFIDAEHALDPIYARKLGVDLENLFISQPDTGEQ 122
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + +TL+RSG+VDV+VVDSVAAL P+ E+DGEMGDA +QARLMS+ALRKL+ ++
Sbjct: 123 ALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDALPGLQARLMSKALRKLTAAIFR 182
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K + +G+Q
Sbjct: 183 SNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKDRDMIVGNQT 240
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G+GIS+ E+IDL +K K+GA F+YN + +G+
Sbjct: 241 RVKVVKNKLAPPFKQVEFDIIYGEGISKVGELIDLGVKVGVVEKSGAWFSYNSQRLGQGR 300
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E KQFL ++ + E+ LR+
Sbjct: 301 ENAKQFLRDHAEIATEIETALRQN 324
>gi|375256924|ref|YP_005016094.1| recombinase A [Klebsiella oxytoca KCTC 1686]
gi|365906402|gb|AEX01855.1| recombinase A [Klebsiella oxytoca KCTC 1686]
Length = 352
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 192/346 (55%), Positives = 245/346 (70%), Gaps = 4/346 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV+VVDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+G+ +GS+
Sbjct: 185 QSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKEGDNVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +K K KAGA ++YN D+ +G
Sbjct: 243 TRVKVVKNKIAAPFKQAEFQILYGEGINFFGELVDLGVKEKLIEKAGAWYSYNGDKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEET 347
K +L EN + +E+ K+RE L+ + D +S ET
Sbjct: 303 KANAISWLKENPAAAKEIEKKVRELLLSNQDSTPDFAVDGNSEAET 348
>gi|311105063|ref|YP_003977916.1| protein RecA [Achromobacter xylosoxidans A8]
gi|310759752|gb|ADP15201.1| protein RecA [Achromobacter xylosoxidans A8]
Length = 354
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/334 (54%), Positives = 245/334 (73%), Gaps = 3/334 (0%)
Query: 14 QITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASGKTT 73
QI FGKGSIM G + + VVSTGS LDIALG GGLP+GRVVEIYGPE+SGKTT
Sbjct: 23 QIEKQFGKGSIMRYGDNDVSHDIQVVSTGSLGLDIALGVGGLPRGRVVEIYGPESSGKTT 82
Query: 74 LALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSLVDTLIR 133
L L V+AE Q+ GG C F+DAEHALD A +GV +LL++QPD GEQAL + D L+R
Sbjct: 83 LTLQVVAEMQKLGGTCAFVDAEHALDVQYASKLGVNLADLLISQPDTGEQALEITDALVR 142
Query: 134 SGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFINQ 193
SGSVD++V+DSVAALVPK E++GEMGD+ +QARLMSQALRKL+ ++ + ++IFINQ
Sbjct: 143 SGSVDLIVIDSVAALVPKAEIEGEMGDSLPGLQARLMSQALRKLTATIKKTNCMVIFINQ 202
Query: 194 VRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVKIVKNKLA 253
+R K+ FG P E T GGNALKFYASVRL+I+RIG +KKG+E +G++ VK+VKNK+A
Sbjct: 203 IRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGSIKKGDEVVGNETRVKVVKNKVA 260
Query: 254 PPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGKEAFKQFLVEN 312
PPFK A+F++ +G GISRE EIIDL + K+GA ++YN +R +GK+ +++L E+
Sbjct: 261 PPFKQAEFDIMYGAGISREGEIIDLGVAANVVDKSGAWYSYNGNRIGQGKDNVREYLKEH 320
Query: 313 ESVREELVIKLREKLVVDHKEPQTAVTDEDSTEE 346
+++ E+ ++RE + + + T ED+ EE
Sbjct: 321 KALAIEIENRVRENQGIVSRAAEFVPTAEDTAEE 354
>gi|65306699|gb|AAY41902.1| RecA [Mycobacterium aubagnense]
Length = 350
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/325 (55%), Positives = 246/325 (75%), Gaps = 4/325 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
++ AL+ AL QI SFGKGS+M LG T + + V+ TGS ALD+ALG GGLP+GRVVEI
Sbjct: 8 REKALELALAQIDKSFGKGSVMRLGEE-TRQPISVIPTGSIALDVALGIGGLPRGRVVEI 66
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ALH +A AQ GG FIDAEHALDP A+ +GV T+ LL++QPD GEQ
Sbjct: 67 YGPESSGKTTVALHAVANAQAAGGIAAFIDAEHALDPEYAKKLGVDTDALLVSQPDTGEQ 126
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RSG++D++V+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ +L+
Sbjct: 127 ALEIADMLVRSGAIDILVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTGALNN 186
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T IFINQ+R K+ FG P E T GG ALKFYASVR++++RI +K G + +G++
Sbjct: 187 SGTTAIFINQLREKIGVM-FGSP-ETTTGGKALKFYASVRMDVRRIETLKDGTDAVGNRT 244
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VKIVKNK+APPFK A+F++ +G+GISRE +ID+ ++H F K+G+ FTY+ +GK
Sbjct: 245 RVKIVKNKVAPPFKQAEFDILYGRGISREGSLIDMGVEHGFIRKSGSWFTYDGEQLGQGK 304
Query: 303 EAFKQFLVENESVREELVIKLREKL 327
E + FL++N E+ K++EKL
Sbjct: 305 ENARNFLLQNLDAANEIEKKIKEKL 329
>gi|146305465|ref|YP_001185930.1| recA protein [Pseudomonas mendocina ymp]
gi|145573666|gb|ABP83198.1| recA protein [Pseudomonas mendocina ymp]
Length = 348
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/347 (54%), Positives = 253/347 (72%), Gaps = 7/347 (2%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI FGKGSIM LG T + V+STGS LDIALG GGLP+GR+VEI
Sbjct: 5 KSKALEAALSQIEKQFGKGSIMRLGSDRT-MDIDVISTGSLGLDIALGVGGLPRGRIVEI 63
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIAEAQRQG C F+DAEHALDP A +GV + LL +QPD GEQ
Sbjct: 64 YGPESSGKTTLTLSVIAEAQRQGLTCAFVDAEHALDPIYAAKLGVNIDELLCSQPDTGEQ 123
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL +VD L RSG+V+++VVDSVAALVPK E++GE+GD+H+ + AR+MSQA+RK++ +L
Sbjct: 124 ALEIVDILTRSGAVNLIVVDSVAALVPKAEIEGEIGDSHVGLAARMMSQAMRKITGNLKN 183
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T+ IFINQ+R K+ FG P E T GGNALKFYASVRL+I+R G VK+GEE +GS+
Sbjct: 184 SNTMCIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRTGAVKEGEEVVGSET 241
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+A PF+ A+F++ +G+GIS+ EI+DLA+ + F K+GA +++ +GK
Sbjct: 242 RVKVVKNKVAAPFRQAEFQIVYGQGISKAGEIVDLAVANNFVEKSGAWYSFEGNKIGQGK 301
Query: 303 EAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETVS 349
++L+EN+ ++L +REKL+ +PQ + +T+E ++
Sbjct: 302 ANTMKWLLENKPTMDKLEGMIREKLM---SKPQAETSARLATQEELA 345
>gi|58582564|ref|YP_201580.1| recombinase A [Xanthomonas oryzae pv. oryzae KACC 10331]
gi|58427158|gb|AAW76195.1| RecA [Xanthomonas oryzae pv. oryzae KACC 10331]
Length = 373
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 192/340 (56%), Positives = 242/340 (71%), Gaps = 3/340 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGS+M +G V V V+ TGS LDIALGTGGLPKGRVVEI
Sbjct: 34 KKRALAAALSQIEKQFGKGSVMRMGDRVI-EAVEVIPTGSLMLDIALGTGGLPKGRVVEI 92
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L IA+ Q+ GG FIDAEHALDP A +GV ++LLL+QPD GEQ
Sbjct: 93 YGPESSGKTTLTLQAIAQCQKLGGTAAFIDAEHALDPVYAAKLGVNVDDLLLSQPDTGEQ 152
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RS SVD+VV+DSVAAL PK E++GEMGD +QARLMSQALRKL+ ++
Sbjct: 153 ALEIADMLVRSSSVDIVVIDSVAALTPKAEIEGEMGDQLPGLQARLMSQALRKLTGNIKR 212
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T+++FINQ+R K+ G EVT GGNALKFYASVRL+I+RIG +KKG+E IG+Q
Sbjct: 213 SNTLVVFINQLRMKIGVMMPGQSPEVTTGGNALKFYASVRLDIRRIGAIKKGDEIIGNQT 272
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYND-RNFRGK 302
+K+VKNKLAPPFK E+ +G+GISRE E+ID+ ++ K KAGA ++Y D R +GK
Sbjct: 273 KIKVVKNKLAPPFKQVVTEILYGEGISREGELIDMGVEAKLVEKAGAWYSYGDERIGQGK 332
Query: 303 EAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDED 342
+ + +L +N V L +LREK + P+ A DE+
Sbjct: 333 DNARTYLRDNPQVAVRLEAELREKF-QPAEAPREAGDDEE 371
>gi|397659531|ref|YP_006500233.1| recombinase A [Klebsiella oxytoca E718]
gi|423109875|ref|ZP_17097570.1| protein recA [Klebsiella oxytoca 10-5243]
gi|423115811|ref|ZP_17103502.1| protein recA [Klebsiella oxytoca 10-5245]
gi|376379756|gb|EHS92506.1| protein recA [Klebsiella oxytoca 10-5245]
gi|376380810|gb|EHS93552.1| protein recA [Klebsiella oxytoca 10-5243]
gi|394347690|gb|AFN33811.1| RecA protein [Klebsiella oxytoca E718]
Length = 352
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 192/346 (55%), Positives = 245/346 (70%), Gaps = 4/346 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV+VVDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+G+ +GS+
Sbjct: 185 QSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKEGDNVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +K K KAGA ++YN D+ +G
Sbjct: 243 TRVKVVKNKIAAPFKQAEFQILYGEGINFFGELVDLGVKEKLIEKAGAWYSYNGDKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEET 347
K +L EN + +E+ K+RE L+ + D +S ET
Sbjct: 303 KANAISWLKENPAAAKEIEKKVRELLLSNQDSTPDFAVDGNSEAET 348
>gi|416050762|ref|ZP_11577098.1| protein RecA [Aggregatibacter actinomycetemcomitans serotype e str.
SC1083]
gi|347993753|gb|EGY35091.1| protein RecA [Aggregatibacter actinomycetemcomitans serotype e str.
SC1083]
Length = 352
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/344 (54%), Positives = 251/344 (72%), Gaps = 7/344 (2%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
+K AL AL QI FGKG+IM LG S + +STGSF LD+ALG GGLP GR+VE
Sbjct: 6 EKQKALDAALGQIEKQFGKGAIMKLGDS-QKLDIEAISTGSFGLDLALGIGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
I+GPE+SGKTTL L VIAEAQ+ G C FIDAEHALDP A +GV + LL++QPD GE
Sbjct: 65 IFGPESSGKTTLTLSVIAEAQKTGKTCAFIDAEHALDPIYASKLGVDVKELLVSQPDNGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L+RSG+VDV++VDSVAAL PK E++G+MGD+HM +QARLMSQALRKL+ +
Sbjct: 125 QALEICDALVRSGAVDVIIVDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTSQIK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+R+G +K+G+E IG++
Sbjct: 185 NANCLVIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRVGSIKEGDEVIGNE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRG 301
VK+VKNK+APPF+ F++ +G+GIS+ESE+IDL +KHK SKAGA + Y N++ +G
Sbjct: 243 TRVKVVKNKVAPPFRQVDFQILYGEGISKESELIDLGVKHKLISKAGAWYAYQNEKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTE 345
K ++L +N + + LR++L+ P++A+T E E
Sbjct: 303 KTNAMKWLKDNPEQAKFIESTLRDELLA---HPESAITAEVENE 343
>gi|384419687|ref|YP_005629047.1| recombinase A [Xanthomonas oryzae pv. oryzicola BLS256]
gi|353462600|gb|AEQ96879.1| RecA protein [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 344
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 192/340 (56%), Positives = 242/340 (71%), Gaps = 3/340 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGS+M +G V V V+ TGS LDIALGTGGLPKGRVVEI
Sbjct: 5 KKRALSAALSQIEKQFGKGSVMRMGDRVI-EAVEVIPTGSLMLDIALGTGGLPKGRVVEI 63
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L IA+ Q+ GG FIDAEHALDP A +GV ++LLL+QPD GEQ
Sbjct: 64 YGPESSGKTTLTLQAIAQCQKLGGTAAFIDAEHALDPIYAAKLGVNVDDLLLSQPDTGEQ 123
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RS SVD+VV+DSVAAL PK E++GEMGD +QARLMSQALRKL+ ++
Sbjct: 124 ALEIADMLVRSSSVDIVVIDSVAALTPKAEIEGEMGDQLPGLQARLMSQALRKLTGNIKR 183
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T+++FINQ+R K+ G EVT GGNALKFYASVRL+I+RIG +KKG+E IG+Q
Sbjct: 184 SNTLVVFINQLRMKIGVMMPGQSPEVTTGGNALKFYASVRLDIRRIGAIKKGDEIIGNQT 243
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYND-RNFRGK 302
+K+VKNKLAPPFK E+ +G+GISRE E+ID+ ++ K KAGA ++Y D R +GK
Sbjct: 244 KIKVVKNKLAPPFKQVVTEILYGEGISREGELIDMGVEAKLVEKAGAWYSYGDERIGQGK 303
Query: 303 EAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDED 342
+ + +L +N V L +LREK + P+ A DE+
Sbjct: 304 DNARTYLRDNPQVAVRLEAELREKF-QPAEAPREAGDDEE 342
>gi|147677636|ref|YP_001211851.1| RecA/RadA recombinase [Pelotomaculum thermopropionicum SI]
gi|146273733|dbj|BAF59482.1| RecA/RadA recombinase [Pelotomaculum thermopropionicum SI]
Length = 342
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 184/343 (53%), Positives = 253/343 (73%), Gaps = 4/343 (1%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
MS + AL+ AL QI FGKGSIM LG + +V V+ TG+ ALDIALG GG+P+GRV
Sbjct: 1 MSDRQKALELALMQIERQFGKGSIMKLGEASAKLNVEVIPTGALALDIALGVGGVPRGRV 60
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+EI+GPE+SGKTT+ALHVIAEAQ+ GG F+DAEHALDP A+ +GV ENLL++QPD
Sbjct: 61 IEIFGPESSGKTTVALHVIAEAQKMGGTAAFVDAEHALDPVYAKNLGVDIENLLVSQPDT 120
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + + L+RSG+VDV+VVDSVAALVP+ E++GEMGDAH+ +QARLMSQALRKL+ +
Sbjct: 121 GEQALEIAEALVRSGAVDVIVVDSVAALVPRAEIEGEMGDAHVGLQARLMSQALRKLTGA 180
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
+S S+T +IFINQ+R K+ +G P E T GG ALKFYAS+RL +++ +K+G + IG
Sbjct: 181 ISKSRTTVIFINQIREKVGVV-YGSP-ETTTGGRALKFYASIRLEVRKQENIKQGTDIIG 238
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF- 299
S+ VK+VKNK+APPFK A F++ +G GIS+E I+D+A + K+GA +++ +
Sbjct: 239 SRTRVKVVKNKVAPPFKQADFDIMYGTGISKEGSILDMATELNIVEKSGAWYSFGEERLG 298
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVV-DHKEPQTAVTDE 341
+G+E K++L E+ + E+ K+R+ L V K P V++E
Sbjct: 299 QGRENVKEYLREHPEITREIERKVRQALNVGGFKAPAATVSEE 341
>gi|385233454|ref|YP_005794796.1| recombinase A [Ketogulonicigenium vulgare WSH-001]
gi|343462365|gb|AEM40800.1| recombinase A [Ketogulonicigenium vulgare WSH-001]
Length = 362
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/324 (55%), Positives = 241/324 (74%), Gaps = 3/324 (0%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVV 61
S K AL AL QI FGKG+IM LG + + STGS LDIALG GGLPKGR++
Sbjct: 15 SDKQKALDSALAQIERQFGKGAIMRLGGANALPEIEATSTGSLGLDIALGIGGLPKGRII 74
Query: 62 EIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCG 121
EI+GPE+SGKTTL LH +AE Q++GG C F+DAEHALDPS A+ +GV + LL++QPD G
Sbjct: 75 EIFGPESSGKTTLTLHAVAEEQKKGGVCAFVDAEHALDPSYAKKLGVNLDELLISQPDTG 134
Query: 122 EQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSL 181
EQAL +VDTL+RSG+V +VVVDSVAAL PK E++G+MGD+ + + ARLMSQA+RKL+ S+
Sbjct: 135 EQALEIVDTLVRSGAVSMVVVDSVAALTPKSEIEGDMGDSSVGVHARLMSQAMRKLTGSI 194
Query: 182 SLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGS 241
S S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K +E +G+
Sbjct: 195 SRSNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAIKDRDEVVGN 252
Query: 242 QIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-R 300
VK+VKNK+APPFK +F++ +G+GIS+ EIIDL +K K+G+ F+Y D+ +
Sbjct: 253 STRVKVVKNKVAPPFKQVEFDIMYGEGISKRGEIIDLGVKAGVVEKSGSWFSYGDQRIGQ 312
Query: 301 GKEAFKQFLVENESVREELVIKLR 324
G+E KQFL +N ++ +E+ K+R
Sbjct: 313 GRENAKQFLRDNPAISDEIEGKIR 336
>gi|15614946|ref|NP_243249.1| recombinase A [Bacillus halodurans C-125]
gi|11387031|sp|Q9KAA7.1|RECA_BACHD RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|10175003|dbj|BAB06102.1| multifunctional protein involved in homologous recombination
[Bacillus halodurans C-125]
Length = 349
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/326 (55%), Positives = 241/326 (73%), Gaps = 4/326 (1%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
MS + AL AL QI FGKGSIM LG R V +S+G+ ALDIALG GG P+GRV
Sbjct: 1 MSDRKAALDMALRQIEKQFGKGSIMKLGEQAEQR-VSTISSGALALDIALGVGGYPRGRV 59
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+E+YGPE+SGKTT+ALH IAE QR GG FIDAEHALDP A+ +GV + LLL+QPD
Sbjct: 60 IEVYGPESSGKTTVALHAIAEVQRNGGQAAFIDAEHALDPVYAKKLGVNIDELLLSQPDT 119
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + + L+RSG++DV+V+DSVAALVPK E++GEMGD+H+ +QARLMSQALRKLS +
Sbjct: 120 GEQALEIAEALVRSGAIDVIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLSGA 179
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
++ S+TI IFINQ+R K+ FG P E T GG ALKFY+SVRL ++R +K+G + +G
Sbjct: 180 INKSKTIAIFINQIREKVGVM-FGNP-ETTPGGRALKFYSSVRLEVRRAETLKQGNDMVG 237
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF- 299
++ +K+VKNK+APPFK A+ ++ +G+GISRE I+D+A + K+GA +++ND
Sbjct: 238 NKTKIKVVKNKVAPPFKQAEVDIMYGEGISREGSILDIASELDIVQKSGAWYSFNDERLG 297
Query: 300 RGKEAFKQFLVENESVREELVIKLRE 325
+G+E KQFL EN EE+ ++RE
Sbjct: 298 QGRENAKQFLKENPEAAEEIESRIRE 323
>gi|84624450|ref|YP_451822.1| recombinase A [Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|188575921|ref|YP_001912850.1| recombinase A [Xanthomonas oryzae pv. oryzae PXO99A]
gi|62296941|sp|O30633.2|RECA_XANOR RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|123739085|sp|Q2P1M9.1|RECA_XANOM RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|238689464|sp|B2SUC8.1|RECA_XANOP RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|15150329|gb|AAK85395.1|AF399932_2 RecA [Xanthomonas oryzae]
gi|84368390|dbj|BAE69548.1| RecA protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|188520373|gb|ACD58318.1| protein RecA [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 344
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 192/340 (56%), Positives = 242/340 (71%), Gaps = 3/340 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGS+M +G V V V+ TGS LDIALGTGGLPKGRVVEI
Sbjct: 5 KKRALAAALSQIEKQFGKGSVMRMGDRVI-EAVEVIPTGSLMLDIALGTGGLPKGRVVEI 63
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L IA+ Q+ GG FIDAEHALDP A +GV ++LLL+QPD GEQ
Sbjct: 64 YGPESSGKTTLTLQAIAQCQKLGGTAAFIDAEHALDPVYAAKLGVNVDDLLLSQPDTGEQ 123
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RS SVD+VV+DSVAAL PK E++GEMGD +QARLMSQALRKL+ ++
Sbjct: 124 ALEIADMLVRSSSVDIVVIDSVAALTPKAEIEGEMGDQLPGLQARLMSQALRKLTGNIKR 183
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T+++FINQ+R K+ G EVT GGNALKFYASVRL+I+RIG +KKG+E IG+Q
Sbjct: 184 SNTLVVFINQLRMKIGVMMPGQSPEVTTGGNALKFYASVRLDIRRIGAIKKGDEIIGNQT 243
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYND-RNFRGK 302
+K+VKNKLAPPFK E+ +G+GISRE E+ID+ ++ K KAGA ++Y D R +GK
Sbjct: 244 KIKVVKNKLAPPFKQVVTEILYGEGISREGELIDMGVEAKLVEKAGAWYSYGDERIGQGK 303
Query: 303 EAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDED 342
+ + +L +N V L +LREK + P+ A DE+
Sbjct: 304 DNARTYLRDNPQVAVRLEAELREKF-QPAEAPREAGDDEE 342
>gi|11387036|sp|Q9R9U2.1|RECA_PSEOL RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|5824159|emb|CAB54066.1| RecA gene protein [Pseudomonas putida]
Length = 348
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/347 (54%), Positives = 253/347 (72%), Gaps = 7/347 (2%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI FGKGSIM LG T + V+STGS LDIALG GGLP+GR+VEI
Sbjct: 5 KSKALEAALSQIEKQFGKGSIMRLGSDRT-MDIDVISTGSLGLDIALGVGGLPRGRIVEI 63
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIAEAQRQG C F+DAEHALDP A +GV + LL +QPD GEQ
Sbjct: 64 YGPESSGKTTLTLSVIAEAQRQGLTCAFVDAEHALDPIYAAKLGVNIDELLCSQPDTGEQ 123
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL +VD L RSG+V+++VVDSVAALVPK E++GE+GD+H+ + AR+MSQA+RK++ +L
Sbjct: 124 ALEIVDILTRSGAVNLIVVDSVAALVPKAEIEGEIGDSHVGLAARMMSQAMRKITGNLKN 183
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T+ IFINQ+R K+ FG P E T GGNALKFYASVRL+I+R G VK+GEE +GS+
Sbjct: 184 SNTMCIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRTGAVKEGEEVVGSET 241
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+A PF+ A+F++ +G+GIS+ EI+DLA+ + F K+GA +++ +GK
Sbjct: 242 RVKVVKNKVAAPFRQAEFQIVYGQGISKAGEIVDLAVANNFVEKSGAWYSFEGNKIGQGK 301
Query: 303 EAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETVS 349
++L+EN+ ++L +REKL+ +PQ + +T+E ++
Sbjct: 302 ANTMKWLLENKPTMDKLEGMIREKLM---SKPQAETSARLATQEELA 345
>gi|422322244|ref|ZP_16403286.1| RecA protein [Achromobacter xylosoxidans C54]
gi|317402893|gb|EFV83435.1| RecA protein [Achromobacter xylosoxidans C54]
Length = 354
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 184/334 (55%), Positives = 244/334 (73%), Gaps = 3/334 (0%)
Query: 14 QITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASGKTT 73
QI FGKGSIM G + + VVSTGS LDIALG GGLP+GRVVEIYGPE+SGKTT
Sbjct: 23 QIEKQFGKGSIMRYGDNEVSHDIQVVSTGSLGLDIALGVGGLPRGRVVEIYGPESSGKTT 82
Query: 74 LALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSLVDTLIR 133
L L V+AE Q+ GG C F+DAEHALD A +GV +LL++QPD GEQAL + D L+R
Sbjct: 83 LTLQVVAEMQKLGGTCAFVDAEHALDVQYASKLGVNLSDLLISQPDTGEQALEITDALVR 142
Query: 134 SGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFINQ 193
SGSVD++VVDSVAALVPK E++GEMGD+ +QARLMSQALRKL+ ++ + ++IFINQ
Sbjct: 143 SGSVDLIVVDSVAALVPKAEIEGEMGDSLPGLQARLMSQALRKLTATIKKTNCMVIFINQ 202
Query: 194 VRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVKIVKNKLA 253
+R K+ FG P E T GGNALKFYASVRL+I+RIG +KKG+E +G++ VK+VKNK+A
Sbjct: 203 IRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGSIKKGDEVVGNETRVKVVKNKVA 260
Query: 254 PPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGKEAFKQFLVEN 312
PPFK A+F++ +G GISRE EIIDL + K+GA ++YN +R +GK+ +++L E+
Sbjct: 261 PPFKQAEFDIMYGAGISREGEIIDLGVAANVVDKSGAWYSYNGNRIGQGKDNVREYLKEH 320
Query: 313 ESVREELVIKLREKLVVDHKEPQTAVTDEDSTEE 346
+ + E+ ++RE + + + T ED +EE
Sbjct: 321 KELAIEIENRVRENQGIVSRAAEFVPTAEDDSEE 354
>gi|160876375|ref|YP_001555691.1| recombinase A [Shewanella baltica OS195]
gi|373950462|ref|ZP_09610423.1| recA protein [Shewanella baltica OS183]
gi|378709576|ref|YP_005274470.1| recA protein [Shewanella baltica OS678]
gi|386323701|ref|YP_006019818.1| recA protein [Shewanella baltica BA175]
gi|418025432|ref|ZP_12664410.1| Protein recA [Shewanella baltica OS625]
gi|189039607|sp|A9KYG0.1|RECA_SHEB9 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|160861897|gb|ABX50431.1| recA protein [Shewanella baltica OS195]
gi|315268565|gb|ADT95418.1| recA protein [Shewanella baltica OS678]
gi|333817846|gb|AEG10512.1| recA protein [Shewanella baltica BA175]
gi|353535044|gb|EHC04608.1| Protein recA [Shewanella baltica OS625]
gi|373887062|gb|EHQ15954.1| recA protein [Shewanella baltica OS183]
Length = 355
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 189/347 (54%), Positives = 247/347 (71%), Gaps = 6/347 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K+ AL L QI FGKGSIM LG + V +STGS +LD+ALG GGLP GR+VE
Sbjct: 6 NKEKALAAVLIQIEKQFGKGSIMKLGEDRS-MDVETISTGSLSLDVALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A+ +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLEVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV+VVDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALTRSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+R G +K G+E +G++
Sbjct: 185 QSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRTGAIKDGDEVVGNE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+R E++DL + HK KAGA ++Y D+ +G
Sbjct: 243 TRVKVVKNKVAAPFKQAEFQILYGQGINRTGELVDLGVAHKLIEKAGAWYSYKGDKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETV 348
+ ++L EN ++ E+ LRE L+ A D+ STE+ V
Sbjct: 303 RANAGKYLTENPAIATEIDKTLRELLL--SNPSALAAKDDASTEDNV 347
>gi|456387681|gb|EMF53171.1| recA protein [Streptomyces bottropensis ATCC 25435]
Length = 378
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 190/359 (52%), Positives = 259/359 (72%), Gaps = 12/359 (3%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLG-RSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
+ ++ AL AL QI FGKG++M LG R P + V+ TGS ALD+ALG GGLP+GRV
Sbjct: 7 TDREKALDAALAQIERQFGKGAVMRLGERPNEP--IEVIPTGSTALDVALGVGGLPRGRV 64
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+E+YGPE+SGKTTL LH +A AQR GG F+DAEHALDP A+ +GV +NL+L+QPD
Sbjct: 65 IEVYGPESSGKTTLTLHAVANAQRAGGQVAFVDAEHALDPEYAKKLGVDIDNLILSQPDN 124
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL +VD L+RSG++D++V+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ +
Sbjct: 125 GEQALEIVDMLVRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITSA 184
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
L+ S+T IFINQ+R K+ FG P E T GG ALKFYASVRL+I+RI +K G + +G
Sbjct: 185 LNQSKTTAIFINQLREKIGVM-FGSP-ETTTGGRALKFYASVRLDIRRIETLKDGTDAVG 242
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNF 299
++ VK+VKNK+APPFK A+F++ +G+GISRE +ID+ +++ F KAGA +TY D+
Sbjct: 243 NRTRVKVVKNKVAPPFKQAEFDILYGQGISREGGLIDMGVENGFVRKAGAWYTYEGDQLG 302
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVDHK--EPQTAVTDEDSTEETVSTISPDST 356
+GKE + FL +N + E+ K++EKL V + EP T E + VS D T
Sbjct: 303 QGKENARNFLKDNPDLANEIEKKIKEKLGVGVRPEEP----TAEPGADAAVSATPADDT 357
>gi|393718758|ref|ZP_10338685.1| recombinase A [Sphingomonas echinoides ATCC 14820]
Length = 367
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 192/354 (54%), Positives = 254/354 (71%), Gaps = 17/354 (4%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL+ AL QI +FGKGS M LG T V V+STGS LDIALG GGLP+GRV+EIYGP
Sbjct: 29 ALEAALAQIDRAFGKGSAMKLGSKQT-MQVEVISTGSLGLDIALGVGGLPRGRVIEIYGP 87
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTTLALHVIAEAQ+ GG F+DAEHALDP A+ +GV + L+++QPD GEQAL
Sbjct: 88 ESSGKTTLALHVIAEAQKGGGTAAFVDAEHALDPVYAKKLGVNIDELIVSQPDTGEQALE 147
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+VDTL+RS ++DV+VVDSVAALVP+ E++GEMGD+H+ +QARLMSQ+LRKL+ S+S S+
Sbjct: 148 IVDTLVRSNAIDVLVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQSLRKLTGSISRSRC 207
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
++IFINQ+R K+ +G P E T GGNALKFYASVRL+I+R G +K +E IG+ VK
Sbjct: 208 MVIFINQLRMKIGVM-YGNP-ETTTGGNALKFYASVRLDIRRTGQIKDRDEIIGNTTRVK 265
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYND-RNFRGKEAF 305
+VKNK+APPFK +F++ +G+G+S+ EI+DL +K K+GA F+Y+ R +G+E
Sbjct: 266 VVKNKVAPPFKQVEFDIMYGQGVSKIGEILDLGVKAGLVEKSGAWFSYDSVRIGQGRENA 325
Query: 306 KQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETVSTISPDSTDEE 359
K FL EN + + L +R A TD+ EE ++ PD D+E
Sbjct: 326 KTFLKENVEMSDRLEKAIR------------ARTDK-VAEEMMAGAEPDEGDDE 366
>gi|406708467|ref|YP_006758819.1| recombinase A [alpha proteobacterium HIMB59]
gi|406654243|gb|AFS49642.1| RecA protein [alpha proteobacterium HIMB59]
Length = 353
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/340 (55%), Positives = 249/340 (73%), Gaps = 12/340 (3%)
Query: 1 MSKKDL--ALQQALDQITSSFGKGSIMWLGRSVTPR-HVPVVSTGSFALDIALGTGGLPK 57
M KKD L+ + I S+GKGSIM LG+ +V V STGS LDIALG GGLPK
Sbjct: 1 MDKKDNLNKLKTVISSIEKSYGKGSIMMLGKKDEDMGNVDVYSTGSLGLDIALGIGGLPK 60
Query: 58 GRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQ 117
GRVVE+YGPE+SGKTTL LHVIAEAQ+ GG C FIDAEHALDP A+ +GV + LL++Q
Sbjct: 61 GRVVEVYGPESSGKTTLTLHVIAEAQKMGGTCAFIDAEHALDPGYAKKLGVNIDELLISQ 120
Query: 118 PDCGEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKL 177
PD GEQAL + DTL++S +D++V+DSVAALVP+ EL+GEMGD+ +QARLMSQALRKL
Sbjct: 121 PDTGEQALEIADTLVKSEGIDLLVIDSVAALVPRAELEGEMGDSLPGLQARLMSQALRKL 180
Query: 178 SHSLSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEE 237
+ S+S + T+++FINQ+R K+ FG P E T GGNALKFY+SVRL+I+RIG +K +
Sbjct: 181 TSSISKTNTMVVFINQLRMKIGVM-FGSP-ETTTGGNALKFYSSVRLDIRRIGAIKDKDN 238
Query: 238 TIGSQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDR 297
IG+Q VK+VKNK+APPFK +F++ +G+GIS+ EIIDL ++ K+GA ++Y D
Sbjct: 239 IIGNQTRVKVVKNKMAPPFKQVEFDIMYGEGISKIGEIIDLGVQADIIDKSGAWYSYKDE 298
Query: 298 NF-RGKEAFKQFLVENESVREELVIKLR------EKLVVD 330
+G+E KQFL +N ++ EE+ ++R E+L++D
Sbjct: 299 KIGQGRENTKQFLKDNPALLEEIETRIRSNSNTVEELMID 338
>gi|320094021|ref|ZP_08025846.1| recombination protein A [Actinomyces sp. oral taxon 178 str. F0338]
gi|319979065|gb|EFW10583.1| recombination protein A [Actinomyces sp. oral taxon 178 str. F0338]
Length = 375
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/337 (54%), Positives = 244/337 (72%), Gaps = 4/337 (1%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVV 61
+ ++ ALQ AL QI FGKGS+M LG P V V+ TGS ALD+ALG GGLP+GRV+
Sbjct: 28 NDRNKALQVALSQIDKQFGKGSVMRLGDDSRP-PVQVIPTGSLALDVALGIGGLPRGRVI 86
Query: 62 EIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCG 121
EIYGPE+SGKTT+ALH +A AQ+ GG FIDAEHALDP A +GV T++LL++QPD G
Sbjct: 87 EIYGPESSGKTTVALHAVANAQKAGGNAAFIDAEHALDPVYARALGVDTDSLLVSQPDTG 146
Query: 122 EQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSL 181
EQAL + D LIRSG +D++V+DSVAALVPK E++GEMGD+H+ +QARLMSQALRK++ +L
Sbjct: 147 EQALEIADMLIRSGGIDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITGAL 206
Query: 182 SLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGS 241
S + T IFINQ+R K+ F FG P E T GG ALKFYASVR++++RI +K+ +G+
Sbjct: 207 SATGTTAIFINQLREKIGVF-FGSP-ETTTGGKALKFYASVRIDVRRIETLKEAGAPVGN 264
Query: 242 QIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-R 300
+ K+VKNK+APPFK A+F++ +GKGISRE IID+ + K+G+ FTY D +
Sbjct: 265 RTRAKVVKNKMAPPFKQAEFDIVYGKGISREGSIIDMGVDTGIVRKSGSWFTYGDDQLGQ 324
Query: 301 GKEAFKQFLVENESVREELVIKLREKLVVDHKEPQTA 337
GKE +QFL +N ++ E+ K+ L + P+ A
Sbjct: 325 GKENVRQFLADNPALAGEIEQKILVALGIAEAPPEEA 361
>gi|261407902|ref|YP_003244143.1| recA protein [Paenibacillus sp. Y412MC10]
gi|261284365|gb|ACX66336.1| recA protein [Paenibacillus sp. Y412MC10]
Length = 353
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/326 (56%), Positives = 244/326 (74%), Gaps = 4/326 (1%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
MS + AL+ AL QI FGKGSIM LG S T V +V +GS ALDIALGTGGLP+GR+
Sbjct: 1 MSDRRAALEMALRQIEKQFGKGSIMKLGES-THMQVEIVPSGSLALDIALGTGGLPRGRI 59
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+E+YGPE+SGKTT+ALH IAE Q+ GG FIDAEHALDPS A +GV + LLL+QPD
Sbjct: 60 IEVYGPESSGKTTVALHAIAEVQKAGGQAAFIDAEHALDPSYANKLGVNIDELLLSQPDT 119
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + + L+RSG+VDV+V+DSVAALVPK E++G+MGD+H+ +QARLMSQALRKLS +
Sbjct: 120 GEQALEIAEALVRSGAVDVIVIDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKLSGA 179
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
++ S+TI IFINQ+R K+ FG P E T GG ALKFY++VRL+++RI +K G + +G
Sbjct: 180 INKSKTIAIFINQLREKVGVM-FGNP-ETTPGGRALKFYSTVRLDVRRIESIKMGNDVVG 237
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNF 299
++ +K+VKNK+APPFK A+ ++ +G+GISRE +ID+ + K+GA ++Y DR
Sbjct: 238 NRTRIKVVKNKVAPPFKQAELDIMYGEGISREGSLIDIGTELDIVDKSGAWYSYAGDRLG 297
Query: 300 RGKEAFKQFLVENESVREELVIKLRE 325
+G+E KQFL EN + + K+RE
Sbjct: 298 QGRENAKQFLKENPEIASVIENKIRE 323
>gi|404445986|ref|ZP_11011112.1| recombinase A [Mycobacterium vaccae ATCC 25954]
gi|403651261|gb|EJZ06412.1| recombinase A [Mycobacterium vaccae ATCC 25954]
Length = 350
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 180/325 (55%), Positives = 246/325 (75%), Gaps = 4/325 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
++ AL+ AL QI +FGKGS+M LG V P + V+ TGS ALD+ALG GGLP+GRVVEI
Sbjct: 8 REKALELALAQIDKNFGKGSVMRLGEDVRP-PIAVIPTGSIALDVALGIGGLPRGRVVEI 66
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ALH +A AQ GG FIDAEHALDP A+ +GV T+ LL++QPD GEQ
Sbjct: 67 YGPESSGKTTVALHAVANAQAAGGIAAFIDAEHALDPDYAKKLGVDTDALLVSQPDTGEQ 126
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RSG++D++V+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ +L+
Sbjct: 127 ALEIADMLVRSGALDILVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTGALNN 186
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T IFINQ+R K+ FG P E T GG ALKFY+SVRL+++RI +K G + +G++
Sbjct: 187 SGTTAIFINQLREKIGVM-FGSP-ETTTGGKALKFYSSVRLDVRRIETLKDGTDAVGNRT 244
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK++PPFK A+F++ +G GISRE +ID+ ++H F K+G+ FTY+ +GK
Sbjct: 245 RVKVVKNKVSPPFKQAEFDILYGHGISREGSLIDMGVEHGFIRKSGSWFTYDGEQLGQGK 304
Query: 303 EAFKQFLVENESVREELVIKLREKL 327
E ++FL+EN E+ K++EKL
Sbjct: 305 ENARKFLLENPDAANEIEKKIKEKL 329
>gi|169630143|ref|YP_001703792.1| RecA protein [Mycobacterium abscessus ATCC 19977]
gi|365870989|ref|ZP_09410530.1| RecA protein [Mycobacterium massiliense CCUG 48898 = JCM 15300]
gi|397679892|ref|YP_006521427.1| protein RecA [Mycobacterium massiliense str. GO 06]
gi|414583737|ref|ZP_11440877.1| protein RecA [Mycobacterium abscessus 5S-1215]
gi|418247799|ref|ZP_12874185.1| RecA protein [Mycobacterium abscessus 47J26]
gi|418421165|ref|ZP_12994341.1| RecA protein [Mycobacterium abscessus subsp. bolletii BD]
gi|419709701|ref|ZP_14237169.1| RecA protein [Mycobacterium abscessus M93]
gi|419716819|ref|ZP_14244214.1| RecA protein [Mycobacterium abscessus M94]
gi|420864458|ref|ZP_15327848.1| protein RecA [Mycobacterium abscessus 4S-0303]
gi|420869249|ref|ZP_15332631.1| protein RecA [Mycobacterium abscessus 4S-0726-RA]
gi|420873693|ref|ZP_15337070.1| protein RecA [Mycobacterium abscessus 4S-0726-RB]
gi|420878786|ref|ZP_15342153.1| protein RecA [Mycobacterium abscessus 5S-0304]
gi|420884184|ref|ZP_15347544.1| protein RecA [Mycobacterium abscessus 5S-0421]
gi|420890398|ref|ZP_15353746.1| protein RecA [Mycobacterium abscessus 5S-0422]
gi|420896373|ref|ZP_15359712.1| protein RecA [Mycobacterium abscessus 5S-0708]
gi|420899384|ref|ZP_15362716.1| protein RecA [Mycobacterium abscessus 5S-0817]
gi|420907911|ref|ZP_15371229.1| protein RecA [Mycobacterium abscessus 5S-1212]
gi|420910672|ref|ZP_15373984.1| protein RecA [Mycobacterium abscessus 6G-0125-R]
gi|420917123|ref|ZP_15380427.1| protein RecA [Mycobacterium abscessus 6G-0125-S]
gi|420922288|ref|ZP_15385585.1| protein RecA [Mycobacterium abscessus 6G-0728-S]
gi|420927951|ref|ZP_15391233.1| protein RecA [Mycobacterium abscessus 6G-1108]
gi|420932166|ref|ZP_15395441.1| protein RecA [Mycobacterium massiliense 1S-151-0930]
gi|420936950|ref|ZP_15400219.1| protein RecA [Mycobacterium massiliense 1S-152-0914]
gi|420942424|ref|ZP_15405681.1| protein RecA [Mycobacterium massiliense 1S-153-0915]
gi|420948394|ref|ZP_15411644.1| protein RecA [Mycobacterium massiliense 1S-154-0310]
gi|420952683|ref|ZP_15415927.1| protein RecA [Mycobacterium massiliense 2B-0626]
gi|420956852|ref|ZP_15420089.1| protein RecA [Mycobacterium massiliense 2B-0107]
gi|420961991|ref|ZP_15425216.1| protein RecA [Mycobacterium massiliense 2B-1231]
gi|420967560|ref|ZP_15430764.1| protein RecA [Mycobacterium abscessus 3A-0810-R]
gi|420972732|ref|ZP_15435925.1| protein RecA [Mycobacterium abscessus 5S-0921]
gi|420978291|ref|ZP_15441469.1| protein RecA [Mycobacterium abscessus 6G-0212]
gi|420983676|ref|ZP_15446843.1| protein RecA [Mycobacterium abscessus 6G-0728-R]
gi|420989944|ref|ZP_15453100.1| protein RecA [Mycobacterium abscessus 4S-0206]
gi|420992809|ref|ZP_15455956.1| protein RecA [Mycobacterium massiliense 2B-0307]
gi|420998663|ref|ZP_15461800.1| protein RecA [Mycobacterium massiliense 2B-0912-R]
gi|421003100|ref|ZP_15466224.1| protein RecA [Mycobacterium massiliense 2B-0912-S]
gi|421007680|ref|ZP_15470791.1| protein RecA [Mycobacterium abscessus 3A-0119-R]
gi|421013644|ref|ZP_15476725.1| protein RecA [Mycobacterium abscessus 3A-0122-R]
gi|421018593|ref|ZP_15481651.1| protein RecA [Mycobacterium abscessus 3A-0122-S]
gi|421024341|ref|ZP_15487385.1| protein RecA [Mycobacterium abscessus 3A-0731]
gi|421029799|ref|ZP_15492831.1| protein RecA [Mycobacterium abscessus 3A-0930-R]
gi|421035166|ref|ZP_15498186.1| protein RecA [Mycobacterium abscessus 3A-0930-S]
gi|421040140|ref|ZP_15503149.1| protein RecA [Mycobacterium abscessus 4S-0116-R]
gi|421044048|ref|ZP_15507049.1| protein RecA [Mycobacterium abscessus 4S-0116-S]
gi|421050065|ref|ZP_15513059.1| protein RecA [Mycobacterium massiliense CCUG 48898 = JCM 15300]
gi|226723635|sp|B1MD17.1|RECA_MYCA9 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|42416881|gb|AAS16322.1| RecA [Mycobacterium abscessus]
gi|50897989|gb|AAT86004.1| RecA [Mycobacterium abscessus subsp. bolletii]
gi|65306695|gb|AAY41900.1| RecA [Mycobacterium abscessus subsp. bolletii]
gi|169242110|emb|CAM63138.1| RecA protein [Mycobacterium abscessus]
gi|336441120|gb|AEI54785.1| recombinase A [Mycobacterium abscessus]
gi|336441124|gb|AEI54787.1| recombinase A [Mycobacterium abscessus subsp. bolletii]
gi|336441130|gb|AEI54790.1| recombinase A [Mycobacterium abscessus subsp. bolletii]
gi|353452292|gb|EHC00686.1| RecA protein [Mycobacterium abscessus 47J26]
gi|363994792|gb|EHM16010.1| RecA protein [Mycobacterium massiliense CCUG 48898 = JCM 15300]
gi|363997632|gb|EHM18843.1| RecA protein [Mycobacterium abscessus subsp. bolletii BD]
gi|382940380|gb|EIC64704.1| RecA protein [Mycobacterium abscessus M94]
gi|382943582|gb|EIC67896.1| RecA protein [Mycobacterium abscessus M93]
gi|392068719|gb|EIT94566.1| protein RecA [Mycobacterium abscessus 4S-0726-RA]
gi|392071433|gb|EIT97279.1| protein RecA [Mycobacterium abscessus 4S-0303]
gi|392072721|gb|EIT98562.1| protein RecA [Mycobacterium abscessus 4S-0726-RB]
gi|392079947|gb|EIU05773.1| protein RecA [Mycobacterium abscessus 5S-0421]
gi|392083695|gb|EIU09520.1| protein RecA [Mycobacterium abscessus 5S-0304]
gi|392088146|gb|EIU13968.1| protein RecA [Mycobacterium abscessus 5S-0422]
gi|392095685|gb|EIU21480.1| protein RecA [Mycobacterium abscessus 5S-0708]
gi|392100731|gb|EIU26522.1| protein RecA [Mycobacterium abscessus 5S-0817]
gi|392105815|gb|EIU31601.1| protein RecA [Mycobacterium abscessus 5S-1212]
gi|392112666|gb|EIU38435.1| protein RecA [Mycobacterium abscessus 6G-0125-R]
gi|392118889|gb|EIU44657.1| protein RecA [Mycobacterium abscessus 5S-1215]
gi|392121263|gb|EIU47029.1| protein RecA [Mycobacterium abscessus 6G-0125-S]
gi|392132124|gb|EIU57870.1| protein RecA [Mycobacterium abscessus 6G-0728-S]
gi|392135184|gb|EIU60925.1| protein RecA [Mycobacterium abscessus 6G-1108]
gi|392136925|gb|EIU62662.1| protein RecA [Mycobacterium massiliense 1S-151-0930]
gi|392142465|gb|EIU68190.1| protein RecA [Mycobacterium massiliense 1S-152-0914]
gi|392149851|gb|EIU75565.1| protein RecA [Mycobacterium massiliense 1S-153-0915]
gi|392155424|gb|EIU81130.1| protein RecA [Mycobacterium massiliense 1S-154-0310]
gi|392157995|gb|EIU83692.1| protein RecA [Mycobacterium massiliense 2B-0626]
gi|392165624|gb|EIU91310.1| protein RecA [Mycobacterium abscessus 5S-0921]
gi|392166565|gb|EIU92250.1| protein RecA [Mycobacterium abscessus 6G-0212]
gi|392168672|gb|EIU94350.1| protein RecA [Mycobacterium abscessus 6G-0728-R]
gi|392184223|gb|EIV09874.1| protein RecA [Mycobacterium abscessus 4S-0206]
gi|392185593|gb|EIV11242.1| protein RecA [Mycobacterium massiliense 2B-0307]
gi|392186475|gb|EIV12122.1| protein RecA [Mycobacterium massiliense 2B-0912-R]
gi|392194558|gb|EIV20178.1| protein RecA [Mycobacterium massiliense 2B-0912-S]
gi|392199133|gb|EIV24743.1| protein RecA [Mycobacterium abscessus 3A-0119-R]
gi|392201992|gb|EIV27590.1| protein RecA [Mycobacterium abscessus 3A-0122-R]
gi|392208468|gb|EIV34042.1| protein RecA [Mycobacterium abscessus 3A-0122-S]
gi|392211138|gb|EIV36704.1| protein RecA [Mycobacterium abscessus 3A-0731]
gi|392224551|gb|EIV50071.1| protein RecA [Mycobacterium abscessus 3A-0930-R]
gi|392225232|gb|EIV50751.1| protein RecA [Mycobacterium abscessus 4S-0116-R]
gi|392225898|gb|EIV51413.1| protein RecA [Mycobacterium abscessus 3A-0930-S]
gi|392237900|gb|EIV63394.1| protein RecA [Mycobacterium abscessus 4S-0116-S]
gi|392238668|gb|EIV64161.1| protein RecA [Mycobacterium massiliense CCUG 48898]
gi|392249456|gb|EIV74931.1| protein RecA [Mycobacterium massiliense 2B-1231]
gi|392250067|gb|EIV75541.1| protein RecA [Mycobacterium abscessus 3A-0810-R]
gi|392253751|gb|EIV79219.1| protein RecA [Mycobacterium massiliense 2B-0107]
gi|395458157|gb|AFN63820.1| Protein RecA [Mycobacterium massiliense str. GO 06]
Length = 346
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 180/325 (55%), Positives = 247/325 (76%), Gaps = 4/325 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
++ AL+ AL QI SFGKGS+M LG V + + V+ TGS ALD+ALG GGLP+GRV+EI
Sbjct: 7 REKALELALAQIDKSFGKGSVMRLGDEVR-QPISVIPTGSIALDVALGIGGLPRGRVIEI 65
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ALH +A AQR GG FIDAEHALDP A+ +GV T++LL++QPD GEQ
Sbjct: 66 YGPESSGKTTVALHAVANAQRAGGIAAFIDAEHALDPEYAKKLGVDTDSLLVSQPDTGEQ 125
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RSG++D++V+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ +L+
Sbjct: 126 ALEIADMLVRSGAIDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTGALNN 185
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T IFINQ+R K+ FG P E T GG ALKFY+SVRL+++RI +K G + +G++
Sbjct: 186 SGTTAIFINQLREKIGVM-FGSP-ETTTGGKALKFYSSVRLDVRRIETLKDGTDAVGNRT 243
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK++PPFK A+F++ +GKGIS+E +ID+ ++ F K+G+ FTY +GK
Sbjct: 244 RVKVVKNKVSPPFKQAEFDILYGKGISKEGSLIDMGVEQGFIRKSGSWFTYEGEQLGQGK 303
Query: 303 EAFKQFLVENESVREELVIKLREKL 327
E + FL+EN V E+ K++EKL
Sbjct: 304 ENARNFLLENVDVANEIEKKIKEKL 328
>gi|315635224|ref|ZP_07890501.1| recombination protein A [Aggregatibacter segnis ATCC 33393]
gi|315475970|gb|EFU66725.1| recombination protein A [Aggregatibacter segnis ATCC 33393]
Length = 350
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/338 (55%), Positives = 250/338 (73%), Gaps = 7/338 (2%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
+K AL+ AL QI FGKG+IM LG S + +STGSF LD+ALG GGLP GR+VE
Sbjct: 6 EKQKALEAALGQIEKQFGKGAIMKLGDS-QKLDIEAISTGSFGLDLALGIGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
I+GPE+SGKTTL L VIAEAQ+ G C FIDAEHALDP A +GV + LL++QPD GE
Sbjct: 65 IFGPESSGKTTLTLSVIAEAQKAGKTCAFIDAEHALDPIYASKLGVDVKELLVSQPDNGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L+RSG+VDV++VDSVAAL PK E++G+MGD+H+ +QARLMSQALRKL+ +
Sbjct: 125 QALEICDALVRSGAVDVIIVDSVAALTPKAEIEGDMGDSHVGLQARLMSQALRKLTGQIK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+R+G +K+G+E IG++
Sbjct: 185 NANCLVIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRVGSIKEGDEVIGNE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRG 301
VK+VKNK+APPF+ F++ +G+GIS+ESE+IDL +KHK SKAGA + Y N++ +G
Sbjct: 243 TRVKVVKNKVAPPFRQVDFQILYGEGISKESELIDLGVKHKLISKAGAWYAYENEKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVT 339
K ++L EN + + LR++L+ P+TA+T
Sbjct: 303 KTNAMKWLKENPEQAKLIESTLRDELLA---HPETAIT 337
>gi|116328242|ref|YP_797962.1| recombinase A [Leptospira borgpetersenii serovar Hardjo-bovis str.
L550]
gi|116330966|ref|YP_800684.1| recombinase A [Leptospira borgpetersenii serovar Hardjo-bovis str.
JB197]
gi|116120986|gb|ABJ79029.1| RecA recombinase [Leptospira borgpetersenii serovar Hardjo-bovis
str. L550]
gi|116124655|gb|ABJ75926.1| RecA recombinase [Leptospira borgpetersenii serovar Hardjo-bovis
str. JB197]
Length = 367
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 174/313 (55%), Positives = 240/313 (76%), Gaps = 3/313 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K LA++QA++QI FGKGSIM LG + + V V+ +GS LDIALG GG P GR+VEI
Sbjct: 20 KKLAIEQAMNQIEKQFGKGSIMKLGSDTSKQTVQVIPSGSLDLDIALGIGGYPIGRIVEI 79
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L IAEAQ++GG FIDAEHALDPS A+ +GV + LL++QPD GE+
Sbjct: 80 YGPESSGKTTLTLSAIAEAQKRGGVAAFIDAEHALDPSYAKKLGVNIDELLVSQPDNGEE 139
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + ++L+RS ++D++V+DSVAALVPK E++G+MGD+HM +QARLMSQALRKL+ +++
Sbjct: 140 ALEICESLVRSNAIDLIVIDSVAALVPKAEIEGDMGDSHMGLQARLMSQALRKLTGTIAK 199
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+T+++FINQ+R K+ FG P E T GGNALKFY S+RL+I++I +K+ EE++G+++
Sbjct: 200 SKTVVVFINQIRMKIGVM-FGSP-ETTTGGNALKFYCSIRLDIRKIETIKEKEESVGNRV 257
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK APPFK A+F++ F GISRE ++DL +KH KAGA ++YN +GK
Sbjct: 258 RVKVVKNKCAPPFKQAEFDIIFNAGISREGSLVDLGVKHDIIHKAGAWYSYNTEKIGQGK 317
Query: 303 EAFKQFLVENESV 315
EA K++L N +
Sbjct: 318 EAAKEYLKNNPEI 330
>gi|319940910|ref|ZP_08015248.1| recA [Sutterella wadsworthensis 3_1_45B]
gi|319805626|gb|EFW02414.1| recA [Sutterella wadsworthensis 3_1_45B]
Length = 381
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 190/362 (52%), Positives = 257/362 (70%), Gaps = 9/362 (2%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL AL I FGKG+IM + V +++ VVSTGS LD+ALG GGLP+GR+VEIYGP
Sbjct: 22 ALNAALASIEKQFGKGAIMRMADGVEQQNIEVVSTGSLGLDLALGVGGLPRGRIVEIYGP 81
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTTL+L VIAE Q+ GG C F+DAEHALD A+ +GV LLL+QPD GEQAL
Sbjct: 82 ESSGKTTLSLQVIAEMQKIGGTCAFVDAEHALDIQYAQRLGVNVPELLLSQPDAGEQALE 141
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+VD L+RSGS+D++VVDSVAAL P+ E++G+MGDA +QARLMSQALRKL+ S+S ++
Sbjct: 142 IVDALVRSGSIDLIVVDSVAALTPRSEIEGDMGDALPGLQARLMSQALRKLTTSVSRTKC 201
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
++IFINQ+R K+ G+G P E T GGNALKFY+SVRL+I+R+G +K+ +E IG++ VK
Sbjct: 202 LVIFINQIRMKIG--GYGNP-ETTTGGNALKFYSSVRLDIRRVGAIKRADEVIGNETRVK 258
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGKEAF 305
+VKNK+APPFK QF++ +G+GISR EIID+ K K+GA ++Y+ R +GKE
Sbjct: 259 VVKNKVAPPFKQVQFDILYGEGISRLGEIIDIGTDLKVLEKSGAWYSYDGRRLGQGKEKV 318
Query: 306 KQFLVENESVREELVIKLREKLVVDHKEPQTAVTDE----DSTEETVSTISPDSTDEEAA 361
+ L EN + +E+ K+RE V H +AV DE D E++ + + P ++ A
Sbjct: 319 RDLLAENPDLAKEIEGKIRELKGV-HISSISAVDDEMPDMDQAEDSDAPVMPPVPEDTPA 377
Query: 362 AV 363
V
Sbjct: 378 DV 379
>gi|237908825|gb|ACR33788.1| RecA [Burkholderia caribensis]
Length = 319
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/318 (57%), Positives = 239/318 (75%), Gaps = 3/318 (0%)
Query: 11 ALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASG 70
AL QI FGKGS+M LG+ + VVSTGS LDIALG GGLP+GRVVEIYGPE+SG
Sbjct: 3 ALAQIEKQFGKGSVMRLGQGEAVEDIQVVSTGSLGLDIALGVGGLPRGRVVEIYGPESSG 62
Query: 71 KTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSLVDT 130
KTTL L V+AE Q+ GG FIDAEHALD A+ +GV +LL++QPD GEQAL + D
Sbjct: 63 KTTLTLQVVAEMQKVGGTAAFIDAEHALDIQYAQKLGVNVSDLLVSQPDTGEQALEIADA 122
Query: 131 LIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIF 190
L+RSGS+D++V+DSVAALVPK E++GEMGD+ +QARLMSQALRKL+ ++ + ++IF
Sbjct: 123 LVRSGSIDMIVIDSVAALVPKAEIEGEMGDSLPGLQARLMSQALRKLTGTIKRTNCLVIF 182
Query: 191 INQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVKIVKN 250
INQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +KK +E IG++ VK+VKN
Sbjct: 183 INQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGSIKKNDEVIGNETRVKVVKN 240
Query: 251 KLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGKEAFKQFL 309
K++PPF+ A F++ +G+GISR+ EIIDL ++ K KAGA ++YN DR +GK+ ++FL
Sbjct: 241 KVSPPFREAIFDILYGEGISRQGEIIDLGVQAKIVDKAGAWYSYNGDRIGQGKDNAREFL 300
Query: 310 VENESVREELVIKLREKL 327
EN + E+ ++RE L
Sbjct: 301 RENPDIAREIENRIRESL 318
>gi|336246808|ref|YP_004590518.1| recombinase A [Enterobacter aerogenes KCTC 2190]
gi|444355086|ref|YP_007391230.1| RecA protein [Enterobacter aerogenes EA1509E]
gi|334732864|gb|AEG95239.1| recombinase A [Enterobacter aerogenes KCTC 2190]
gi|443905916|emb|CCG33690.1| RecA protein [Enterobacter aerogenes EA1509E]
Length = 352
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/346 (55%), Positives = 245/346 (70%), Gaps = 4/346 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV+VVDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+G+ +GS+
Sbjct: 185 QSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKEGDNVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +K K KAGA ++YN D+ +G
Sbjct: 243 TRVKVVKNKIAAPFKQAEFQILYGEGINFFGELVDLGVKEKLIEKAGAWYSYNGDKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEET 347
K +L +N + +E+ K+RE L+ + D + EET
Sbjct: 303 KANAISWLKDNPAAAKEIEKKVRELLLNNQDSTPDFAVDGNDAEET 348
>gi|301064408|ref|ZP_07204833.1| RecA protein [delta proteobacterium NaphS2]
gi|300441490|gb|EFK05830.1| RecA protein [delta proteobacterium NaphS2]
Length = 346
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 176/317 (55%), Positives = 246/317 (77%), Gaps = 4/317 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
++ A+ QA+ QI FG+GSIM LG + VP +STGS ALD+ALG GG+P+GRVVE+
Sbjct: 3 RERAVDQAISQIEKQFGRGSIMKLGEDKSI-DVPAISTGSLALDLALGVGGVPRGRVVEV 61
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH+ AEAQ +GG F+DAEHALD A +GV +NLL++QPD GEQ
Sbjct: 62 YGPESSGKTTLALHIAAEAQAKGGMVAFVDAEHALDVVYARKLGVDVDNLLVSQPDTGEQ 121
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + + L+RSG +DV+++DSVAALVP+ E++GEMGD H+ +QARLMSQALRKL+ ++S
Sbjct: 122 ALDIAEILVRSGGIDVLIIDSVAALVPRAEIEGEMGDHHVGLQARLMSQALRKLTGTISK 181
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+T LIFINQ+R K+ FG P E T GGNALKFYAS RL+I+RIG +K+G++ +GS+
Sbjct: 182 SRTCLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASQRLDIRRIGALKEGDQVVGSRT 239
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGK 302
VK+VKNK+APPFK+A+F++ +G+GIS+E +I+DL + K+GA ++++ DR +G+
Sbjct: 240 RVKVVKNKVAPPFKSAEFDIVYGEGISKEGDILDLGVSLDIVEKSGAWYSFDGDRIGQGR 299
Query: 303 EAFKQFLVENESVREEL 319
+ K+FL EN +R+++
Sbjct: 300 QNVKRFLAENTDIRDKI 316
>gi|451936316|ref|YP_007460170.1| recombination protein RecA [Candidatus Kinetoplastibacterium
oncopeltii TCC290E]
gi|451777239|gb|AGF48214.1| recombination protein RecA [Candidatus Kinetoplastibacterium
oncopeltii TCC290E]
Length = 355
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 180/332 (54%), Positives = 245/332 (73%), Gaps = 3/332 (0%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVV 61
S K+ AL AL QI FGKGS+M G + + VVSTGS LDIALG GGLP+GRV+
Sbjct: 11 SDKEKALSAALSQIEKQFGKGSVMRYGDNDIQNDIQVVSTGSLGLDIALGVGGLPRGRVI 70
Query: 62 EIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCG 121
EIYGPE+SGKTTL L +I+E Q+ GG C FIDAEHALD A +G+ +LL+AQPD G
Sbjct: 71 EIYGPESSGKTTLTLQIISEMQKIGGTCAFIDAEHALDVQYASKLGIVLPDLLIAQPDTG 130
Query: 122 EQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSL 181
EQAL + D L+RSGSVD++V+DSVAALVPK E++G+MGD+ +QARLMSQALRKL+ ++
Sbjct: 131 EQALEIADALVRSGSVDLIVIDSVAALVPKAEIEGDMGDSLPGLQARLMSQALRKLTATI 190
Query: 182 SLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGS 241
+ ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +KKG+E +GS
Sbjct: 191 KKTNCMVIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGSIKKGDEVVGS 248
Query: 242 QIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFR 300
+ VK+VKNK+APPFK A+F++ +G GISRE EIID+ + KAGA ++Y+ +R +
Sbjct: 249 ETRVKVVKNKVAPPFKQAEFDIMYGYGISREGEIIDMGVFTGIIDKAGAWYSYSGNRIGQ 308
Query: 301 GKEAFKQFLVENESVREELVIKLREKLVVDHK 332
GK+ ++++ N+S+ E+ ++R+ + ++
Sbjct: 309 GKDNVREYMKNNKSIASEIEKRIRDNAIATNR 340
>gi|291436881|ref|ZP_06576271.1| recA [Streptomyces ghanaensis ATCC 14672]
gi|291339776|gb|EFE66732.1| recA [Streptomyces ghanaensis ATCC 14672]
Length = 373
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/339 (54%), Positives = 253/339 (74%), Gaps = 8/339 (2%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLG-RSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
+ ++ AL AL QI FGKG++M +G RS P + V+ TGS ALD+ALG GGLP+GRV
Sbjct: 4 TDREKALDAALAQIERQFGKGAVMRMGERSKEP--IEVIPTGSTALDVALGVGGLPRGRV 61
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
VEIYGPE+SGKTTL LH +A AQ+ GG F+DAEHALDP A+ +GV +NL+L+QPD
Sbjct: 62 VEIYGPESSGKTTLTLHAVANAQKAGGQVAFVDAEHALDPEYAKKLGVDIDNLILSQPDN 121
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL +VD L+RSG++D++V+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ +
Sbjct: 122 GEQALEIVDMLVRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITSA 181
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
L+ S+T IFINQ+R K+ FG P E T GG ALKFYASVR++I+RI +K G E +G
Sbjct: 182 LNQSKTTAIFINQLREKIGVM-FGSP-ETTTGGRALKFYASVRIDIRRIETLKDGTEAVG 239
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNF 299
++ K+VKNK+APPFK A+F++ +G+GISRE +ID+ ++H F KAGA +TY D+
Sbjct: 240 NRTRCKVVKNKVAPPFKQAEFDILYGQGISREGGLIDMGVEHGFVRKAGAWYTYEGDQLG 299
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVDHK--EPQT 336
+GKE + FL +N + E+ K++EKL V + EP T
Sbjct: 300 QGKENARNFLKDNPDLANEIEKKIKEKLGVGVRPEEPAT 338
>gi|343493961|ref|ZP_08732245.1| recombinase A [Vibrio nigripulchritudo ATCC 27043]
gi|342825602|gb|EGU60079.1| recombinase A [Vibrio nigripulchritudo ATCC 27043]
Length = 346
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/326 (57%), Positives = 240/326 (73%), Gaps = 4/326 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VEI
Sbjct: 5 KQKALAAALGQIEKQFGKGSIMRLGDN-RAMDVETISTGSLSLDIALGAGGLPMGRIVEI 63
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L +IA AQR+G C FIDAEHALDP A+ +GV E LL++QPD GEQ
Sbjct: 64 YGPESSGKTTLTLELIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIEALLVSQPDTGEQ 123
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L RSG++DV+VVDSVAAL PK E++GEMGD+HM +QAR++SQA+RKL+ +L
Sbjct: 124 ALEICDALARSGAIDVMVVDSVAALTPKAEIEGEMGDSHMGLQARMLSQAMRKLTGNLKQ 183
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S + IFINQ+R K+ FG P E T GGNALKFYASVRL+I+R G +K G+E +G++
Sbjct: 184 SNCMCIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRTGSIKDGDEVVGNET 241
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGK 302
+K+VKNK+A PFK A+ ++ +G+G +RE E+IDL +KHK KAGA ++YN D+ +GK
Sbjct: 242 RIKVVKNKIAAPFKQAETQIMYGQGFNREGELIDLGVKHKLVEKAGAWYSYNGDKIGQGK 301
Query: 303 EAFKQFLVENESVREELVIKLREKLV 328
+FL EN ++ E+ KLRE L+
Sbjct: 302 ANAGKFLRENSNIALEIDSKLREMLL 327
>gi|407476870|ref|YP_006790747.1| recA protein [Exiguobacterium antarcticum B7]
gi|407060949|gb|AFS70139.1| recA protein [Exiguobacterium antarcticum B7]
Length = 347
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 185/336 (55%), Positives = 249/336 (74%), Gaps = 5/336 (1%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
MS + AL+ AL QI FGKGSIM LG + R V V+S+GS LDIALG GG P+GRV
Sbjct: 1 MSDRKAALEMALRQIEKQFGKGSIMRLGENADQR-VSVISSGSITLDIALGAGGYPRGRV 59
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+E+YGPE+SGKTT+ALH IAE Q+QGG FIDAEHALDP+ A +GV + LLL+QPD
Sbjct: 60 IEVYGPESSGKTTVALHAIAEVQKQGGQAAFIDAEHALDPAYASKLGVNIDELLLSQPDT 119
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + + L+RSG+VD++VVDSVAALVPK E++GEMGD+HM +QARLMSQALRKLS +
Sbjct: 120 GEQALEIAEALVRSGAVDILVVDSVAALVPKAEIEGEMGDSHMGLQARLMSQALRKLSGA 179
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
+ S+TI+IFINQ+R K+ FG P E T GG ALKFY+SVRL ++R +K G + +G
Sbjct: 180 TNKSKTIVIFINQIREKIGVM-FGNP-ETTPGGRALKFYSSVRLEVRRAEALKNGTDIVG 237
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNF 299
++ +K+VKNK+APPFK A+ ++ +G+GIS+ E+IDL K+GA ++YN +R
Sbjct: 238 NRTKLKVVKNKIAPPFKQAEVDIMYGQGISKFGELIDLGTDLDIVQKSGAWYSYNSERLG 297
Query: 300 RGKEAFKQFLVENESVREELVIKLREKL-VVDHKEP 334
+G+E KQ+++E+ V +E+ +RE +VD K+P
Sbjct: 298 QGRENAKQYMIEHPEVADEVERLIREHHGLVDRKDP 333
>gi|404214717|ref|YP_006668912.1| RecA/RadA recombinase [Gordonia sp. KTR9]
gi|403645516|gb|AFR48756.1| RecA/RadA recombinase [Gordonia sp. KTR9]
Length = 347
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/325 (56%), Positives = 247/325 (76%), Gaps = 4/325 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
++ AL AL QI +FGKGS+M LG T + + V+ TGS ALD+ALG GGLP+GRVVEI
Sbjct: 8 REKALDLALAQIDKNFGKGSVMRLGEE-TRQPIEVIPTGSIALDVALGIGGLPRGRVVEI 66
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ALH +A AQ GG FIDAEHALDP A +GV T+ LL++QPD GEQ
Sbjct: 67 YGPESSGKTTVALHAVANAQANGGLAAFIDAEHALDPDYAAKLGVDTDALLVSQPDTGEQ 126
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D LIRSG++D++V+DSVAALVPK E++GEMGD+H+ +QARLMSQALRK++ +LS
Sbjct: 127 ALEIADMLIRSGALDILVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKMTGALSQ 186
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+T IFINQ+R K+ FG P E T GG ALKFY+SVRL+++RI +K G + +G++
Sbjct: 187 SKTTAIFINQLREKIGVM-FGTP-ETTTGGKALKFYSSVRLDVRRIETLKDGTDAVGNRT 244
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRGK 302
VK+VKNK+APPFK A+F++ +G GIS+E +ID+ + F K+G+ FTY D+ +GK
Sbjct: 245 RVKVVKNKVAPPFKQAEFDILYGHGISKEGSLIDMGVAEGFIRKSGSWFTYEGDQLGQGK 304
Query: 303 EAFKQFLVENESVREELVIKLREKL 327
E ++FL+EN +R+E+ K++EKL
Sbjct: 305 ENARKFLLENLDIRDEIEKKIKEKL 329
>gi|148978203|ref|ZP_01814733.1| recombinase A [Vibrionales bacterium SWAT-3]
gi|145962625|gb|EDK27901.1| recombinase A [Vibrionales bacterium SWAT-3]
Length = 345
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 193/344 (56%), Positives = 247/344 (71%), Gaps = 10/344 (2%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGSIM LG + T V +STGS +LDIALG GGLP GR+ EI
Sbjct: 7 KQKALAAALGQIEKQFGKGSIMKLGENRT-MDVETISTGSLSLDIALGAGGLPMGRITEI 65
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L +IA AQRQG C FIDAEHALDP A +GV +NLL++QPD GEQ
Sbjct: 66 YGPESSGKTTLTLELIAAAQRQGKTCAFIDAEHALDPIYARKLGVDIDNLLVSQPDTGEQ 125
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL +VD L RSG+VDV+VVDSVAAL PK E++GEMGD+HM +QAR++SQA+RK++ +L
Sbjct: 126 ALEIVDALARSGAVDVLVVDSVAALTPKAEIEGEMGDSHMGLQARMLSQAMRKITGNLKQ 185
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S + IFINQ+R K+ FG P E T GGNALKFYASVRL+I+R G VK+G+E +G++
Sbjct: 186 SNCMCIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGNET 243
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGK 302
+K+VKNK+A PFK A+ ++ +GKG +R E+IDL +K+K KAGA ++Y D+ +GK
Sbjct: 244 RIKVVKNKIAAPFKQAETQILYGKGFNRYGELIDLGVKNKLVEKAGAWYSYQGDKIGQGK 303
Query: 303 EAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEE 346
+++ EN + EEL KLRE L+ P T DE+ EE
Sbjct: 304 ANACKYIEENSHIAEELDKKLRELLLT----PTT--LDEEPLEE 341
>gi|386020153|ref|YP_005938177.1| recombinase A [Pseudomonas stutzeri DSM 4166]
gi|327480125|gb|AEA83435.1| recombinase A [Pseudomonas stutzeri DSM 4166]
Length = 348
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/328 (55%), Positives = 240/328 (73%), Gaps = 4/328 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKG++M +G + +P +STGS LDIALG GGLPKGR+VE
Sbjct: 4 NKKRALAAALGQIEKQFGKGAVMRMGDH-DRQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIAEAQ+ G C F+DAEHALDP A +GV ++LL++QPD GE
Sbjct: 63 IYGPESSGKTTLTLSVIAEAQKMGATCAFVDAEHALDPDYAGKLGVNVDDLLVSQPDTGE 122
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L+RS +VDV++VDSVAALVPK E++GEMGDAH+ +QARLMSQALRK++ ++
Sbjct: 123 QALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDAHVGLQARLMSQALRKITGNIK 182
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+R G VK+G+E +GS+
Sbjct: 183 NANCLVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSE 240
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK+VKNK+APPF+ A+F++ +GKGI R EIIDL ++ K+GA + Y +G
Sbjct: 241 TRVKVVKNKVAPPFRQAEFQILYGKGIYRNGEIIDLGVQQGLVEKSGAWYAYKGNKIGQG 300
Query: 302 KEAFKQFLVENESVREELVIKLREKLVV 329
K +FL +N + E+ ++R+KL+V
Sbjct: 301 KANAAKFLEDNPEIGREIEQQIRDKLLV 328
>gi|395787671|ref|ZP_10467263.1| protein recA [Bartonella birtlesii LL-WM9]
gi|395410293|gb|EJF76848.1| protein recA [Bartonella birtlesii LL-WM9]
Length = 347
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/324 (57%), Positives = 238/324 (73%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI SFGKGSIM LG+ + + TGS +LDIALG GGLPKGR+VEI
Sbjct: 3 KTKALDAALSQIERSFGKGSIMRLGQKEQVVEIETIPTGSLSLDIALGVGGLPKGRIVEI 62
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH IAEAQ+ GG C FIDAEHALDP A +GV ENL ++QPD GEQ
Sbjct: 63 YGPESSGKTTLALHAIAEAQKIGGICAFIDAEHALDPIYARKLGVDLENLFISQPDTGEQ 122
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + +TL+RSG+VDV+VVDSVAAL P+ E+DGEMGDA +QARLMS+ALRKL+ ++
Sbjct: 123 ALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDALPGLQARLMSKALRKLTAAIFR 182
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K + +G+Q
Sbjct: 183 SNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKDRDMIVGNQT 240
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G+GIS+ E+IDL +K K+GA F+YN + +G+
Sbjct: 241 RVKVVKNKLAPPFKQVEFDIIYGEGISKVGELIDLGVKVGVVEKSGAWFSYNSQRLGQGR 300
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E KQFL ++ + E+ LR+
Sbjct: 301 ENAKQFLRDHVEIATEIETALRQN 324
>gi|294141936|ref|YP_003557914.1| recA protein [Shewanella violacea DSS12]
gi|293328405|dbj|BAJ03136.1| recA protein [Shewanella violacea DSS12]
Length = 352
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/347 (53%), Positives = 245/347 (70%), Gaps = 4/347 (1%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVV 61
+ K+ AL L QI FGKGSIM LG + + V +STGS +LD+ALG GGLP GR+V
Sbjct: 5 ANKEKALNAVLSQIEKQFGKGSIMKLGENRS-MDVETISTGSLSLDVALGAGGLPLGRIV 63
Query: 62 EIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCG 121
EIYGPE+SGKTTL L VIA AQRQG C FIDAEHALDP A+ +GV +NLL +QPD G
Sbjct: 64 EIYGPESSGKTTLTLEVIAAAQRQGRVCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTG 123
Query: 122 EQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSL 181
EQAL + D L RSG+VDV+VVDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 124 EQALEICDALTRSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNL 183
Query: 182 SLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGS 241
+ T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K +E IG+
Sbjct: 184 KQTNTMLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAIKDRDEVIGN 241
Query: 242 QIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-R 300
+ VK+VKNK+A PFK A+F++ +GKGI+R E++DL + HK KAGA ++Y +
Sbjct: 242 ETRVKVVKNKIAAPFKQAEFQILYGKGINRTGELVDLGVIHKLVEKAGAWYSYKGNKIGQ 301
Query: 301 GKEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEET 347
G+ ++L E+ + E+ LR L+ ++A DE+ ET
Sbjct: 302 GRANAGKYLTEHPEISAEIETTLRGMLLASPDAAESAAGDENVDLET 348
>gi|395789472|ref|ZP_10468992.1| protein recA [Bartonella taylorii 8TBB]
gi|395430015|gb|EJF96067.1| protein recA [Bartonella taylorii 8TBB]
Length = 347
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/324 (57%), Positives = 238/324 (73%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI SFGKGSIM LG+ + + TGS +LDIALG GGLPKGR+VEI
Sbjct: 3 KTKALDAALSQIERSFGKGSIMRLGQKEQVVEIETIPTGSLSLDIALGVGGLPKGRIVEI 62
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH IAEAQ+ GG C FIDAEHALDP A +GV ENL ++QPD GEQ
Sbjct: 63 YGPESSGKTTLALHAIAEAQKIGGICAFIDAEHALDPIYARKLGVDLENLFISQPDTGEQ 122
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + +TL+RSG+VDV+VVDSVAAL P+ E+DGEMGDA +QARLMS+ALRKL+ ++
Sbjct: 123 ALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDALPGLQARLMSKALRKLTAAIFR 182
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K + +G+Q
Sbjct: 183 SNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKDRDMIVGNQT 240
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G+GIS+ E+IDL +K K+GA F+YN + +G+
Sbjct: 241 RVKVVKNKLAPPFKQVEFDIIYGEGISKVGELIDLGVKVGVVEKSGAWFSYNSQRLGQGR 300
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E KQFL ++ + E+ LR+
Sbjct: 301 ENAKQFLRDHVEIATEIETALRQN 324
>gi|455652064|gb|EMF30745.1| recombinase A [Streptomyces gancidicus BKS 13-15]
Length = 370
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/330 (55%), Positives = 249/330 (75%), Gaps = 6/330 (1%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLG-RSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
+ ++ AL AL QI FGKG++M +G RS P + V+ TGS ALD+ALG GGLP+GRV
Sbjct: 4 TDREKALDAALAQIERQFGKGAVMRMGERSKEP--IEVIPTGSTALDVALGVGGLPRGRV 61
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
VEIYGPE+SGKTTL LH +A AQ+ GG F+DAEHALDP A+ +GV +NL+L+QPD
Sbjct: 62 VEIYGPESSGKTTLTLHAVANAQKAGGQVAFVDAEHALDPEYAKKLGVDIDNLILSQPDN 121
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL +VD L+RSG++D++V+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ +
Sbjct: 122 GEQALEIVDMLVRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITSA 181
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
L+ S+T IFINQ+R K+ FG P E T GG ALKFYASVR++I+RI +K G E +G
Sbjct: 182 LNQSKTTAIFINQLREKIGVM-FGSP-ETTTGGRALKFYASVRIDIRRIETLKDGTEAVG 239
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNF 299
++ K+VKNK+APPFK A+F++ +G+GISRE +ID+ ++H F KAGA +TY D+
Sbjct: 240 NRTRCKVVKNKVAPPFKQAEFDILYGQGISREGGLIDMGVEHGFVRKAGAWYTYEGDQLG 299
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVV 329
+GKE + FL +N + E+ K++EKL V
Sbjct: 300 QGKENARNFLKDNPDLANEIERKIKEKLGV 329
>gi|398339137|ref|ZP_10523840.1| recombinase A [Leptospira kirschneri serovar Bim str. 1051]
gi|418677060|ref|ZP_13238338.1| RecA protein [Leptospira kirschneri serovar Grippotyphosa str.
RM52]
gi|418688243|ref|ZP_13249399.1| RecA protein [Leptospira kirschneri serovar Grippotyphosa str.
Moskva]
gi|418739748|ref|ZP_13296129.1| RecA protein [Leptospira kirschneri serovar Valbuzzi str.
200702274]
gi|421090742|ref|ZP_15551532.1| RecA protein [Leptospira kirschneri str. 200802841]
gi|421132456|ref|ZP_15592624.1| RecA protein [Leptospira kirschneri str. 2008720114]
gi|400322960|gb|EJO70816.1| RecA protein [Leptospira kirschneri serovar Grippotyphosa str.
RM52]
gi|410000328|gb|EKO50958.1| RecA protein [Leptospira kirschneri str. 200802841]
gi|410356221|gb|EKP03578.1| RecA protein [Leptospira kirschneri str. 2008720114]
gi|410737100|gb|EKQ81842.1| RecA protein [Leptospira kirschneri serovar Grippotyphosa str.
Moskva]
gi|410752870|gb|EKR09842.1| RecA protein [Leptospira kirschneri serovar Valbuzzi str.
200702274]
Length = 366
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 176/313 (56%), Positives = 238/313 (76%), Gaps = 3/313 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K LA++QA+ QI FGKGSIM LG + V V+ +GS LDIALG GG P GR+VEI
Sbjct: 20 KKLAIEQAMSQIEKQFGKGSIMKLGSDSAKQTVQVIPSGSLDLDIALGIGGYPIGRIVEI 79
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L IAEAQ++GG FIDAEHALDPS A+ +GV + LL++QPD GE+
Sbjct: 80 YGPESSGKTTLTLSAIAEAQKRGGVAAFIDAEHALDPSYAKKLGVNIDELLVSQPDNGEE 139
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + ++L+RS ++D++V+DSVAALVPK E++G+MGD+HM +QARLMSQALRKL+ +++
Sbjct: 140 ALEICESLVRSNAIDLIVIDSVAALVPKAEIEGDMGDSHMGLQARLMSQALRKLTGTIAK 199
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+T++IFINQ+R K+ FG P E T GGNALKFY SVRL+I++I +K+ EE++G+++
Sbjct: 200 SKTVVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYCSVRLDIRKIETIKEKEESVGNRV 257
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK APPFK A+F++ F GISRE ++DL +KH KAGA ++YN +GK
Sbjct: 258 RVKVVKNKCAPPFKQAEFDIIFNAGISREGSLVDLGVKHDIIHKAGAWYSYNTEKIGQGK 317
Query: 303 EAFKQFLVENESV 315
EA K++L N +
Sbjct: 318 EAAKEYLKNNPEI 330
>gi|229577464|ref|YP_001172035.2| recombinase A [Pseudomonas stutzeri A1501]
Length = 348
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/328 (55%), Positives = 240/328 (73%), Gaps = 4/328 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKG++M +G + +P +STGS LDIALG GGLPKGR+VE
Sbjct: 4 NKKRALAAALGQIEKQFGKGAVMRMGDH-DRQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIAEAQ+ G C F+DAEHALDP A +GV ++LL++QPD GE
Sbjct: 63 IYGPESSGKTTLTLSVIAEAQKMGATCAFVDAEHALDPDYAGKLGVNVDDLLVSQPDTGE 122
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L+RS +VDV++VDSVAALVPK E++GEMGDAH+ +QARLMSQALRK++ ++
Sbjct: 123 QALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDAHVGLQARLMSQALRKITGNIK 182
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+R G VK+G+E +GS+
Sbjct: 183 NANCLVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSE 240
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK+VKNK+APPF+ A+F++ +GKGI R EIIDL ++ K+GA + Y +G
Sbjct: 241 TRVKVVKNKVAPPFRQAEFQILYGKGIYRNGEIIDLGVQQGLVEKSGAWYAYKGNKIGQG 300
Query: 302 KEAFKQFLVENESVREELVIKLREKLVV 329
K +FL +N + E+ ++R+KL+V
Sbjct: 301 KANAAKFLEDNPEIGREIEQQIRDKLLV 328
>gi|183221815|ref|YP_001839811.1| recombinase A [Leptospira biflexa serovar Patoc strain 'Patoc 1
(Paris)']
gi|189911887|ref|YP_001963442.1| recombinase A [Leptospira biflexa serovar Patoc strain 'Patoc 1
(Ames)']
gi|193806431|sp|B0SLE9.1|RECA_LEPBP RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|238687836|sp|B0SCX2.1|RECA_LEPBA RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|167776563|gb|ABZ94864.1| RecA recombinase [Leptospira biflexa serovar Patoc strain 'Patoc 1
(Ames)']
gi|167780237|gb|ABZ98535.1| Protein RecA (Recombinase A) [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
Length = 387
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/352 (51%), Positives = 251/352 (71%), Gaps = 11/352 (3%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
A+ AL QI FGKGSIM LG + VVSTGS LDIALG GG P GR++EIYGP
Sbjct: 20 AIDAALGQIEKQFGKGSIMRLGADTRMSEMNVVSTGSLDLDIALGIGGFPSGRIIEIYGP 79
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTTL L IAE Q++GG FIDAEHALDPS A+ +GV ++LL+AQPD GE+AL
Sbjct: 80 ESSGKTTLTLSAIAETQKKGGIAAFIDAEHALDPSYAKKLGVNVDDLLVAQPDNGEEALE 139
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ ++L+RS ++D++V+DSVAALVPK E++G+MGD+HM +QARLMSQALRKL+ ++S S T
Sbjct: 140 ICESLVRSNAIDLIVIDSVAALVPKAEIEGDMGDSHMGLQARLMSQALRKLTGTISKSST 199
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
+IFINQ+R K+ FG P E T GGNALKFYAS+RL+I+RI +K+ EE +G+++ VK
Sbjct: 200 TVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASIRLDIRRIETLKEKEEPVGNRVRVK 257
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGKEAF 305
+VKNK APPF+ A+F++ + GI+RES +IDLA++H +KAG+ ++YN +GKE
Sbjct: 258 VVKNKCAPPFRQAEFDIMYANGINRESSLIDLAVRHDLVAKAGSWYSYNGEKIGQGKEQV 317
Query: 306 KQFLVEN--------ESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETVS 349
+ F +EN VR+ + L ++ + +E ++ D T+ET S
Sbjct: 318 RNFFLENPDIAFKIENQVRDLNALPLLDQAKIQTREVKSIERDTKETKETKS 369
>gi|347532069|ref|YP_004838832.1| recombinase A [Roseburia hominis A2-183]
gi|345502217|gb|AEN96900.1| recombinase A [Roseburia hominis A2-183]
Length = 371
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 180/328 (54%), Positives = 242/328 (73%), Gaps = 3/328 (0%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL A+ I +GKGS+M LG + +V V TGS +LD+ALG GGLPKGR++EIYGP
Sbjct: 22 ALDAAISHIEKQYGKGSVMKLGDNSAHMNVEAVPTGSLSLDLALGIGGLPKGRIIEIYGP 81
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTT+ALH +AE Q++GG FIDAEHALDP A+ IGV +NL ++QPDCGEQAL
Sbjct: 82 ESSGKTTVALHAVAEVQKRGGIAGFIDAEHALDPVYAKNIGVDIDNLYISQPDCGEQALE 141
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ +T++RSG+VD+V+VDSVAALVPK E+DG+MGD+H+ +QARLMSQALRKL+ +S S
Sbjct: 142 IAETMVRSGAVDIVIVDSVAALVPKAEIDGDMGDSHVGLQARLMSQALRKLTSIVSKSNC 201
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
I+IFINQ+R K+ FG P E T GG ALKFY+SVRL+++R+ +K+G E +G+ VK
Sbjct: 202 IVIFINQLREKIGVM-FGNP-ETTTGGRALKFYSSVRLDVRRVEALKQGGEVVGNHTRVK 259
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGKEAF 305
IVKNK+APPFK A+F++ FG+GIS+E +I+DLA +K+GA + YN +G+E
Sbjct: 260 IVKNKVAPPFKEAEFDIMFGQGISKEGDILDLAADAGIINKSGAWYAYNGEKIGQGRENA 319
Query: 306 KQFLVENESVREELVIKLREKLVVDHKE 333
K +L EN + EE+ K+R K + E
Sbjct: 320 KNYLKENPLICEEVEAKVRAKYSPEEDE 347
>gi|429757402|ref|ZP_19289938.1| RecA protein [Actinomyces sp. oral taxon 181 str. F0379]
gi|429175072|gb|EKY16525.1| RecA protein [Actinomyces sp. oral taxon 181 str. F0379]
Length = 363
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 192/359 (53%), Positives = 255/359 (71%), Gaps = 13/359 (3%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
++ AL+ AL QI FGKGS+M LG P V V+ TGS ALD+ALG GGLP+GRV+EI
Sbjct: 16 RNKALELALSQIDKQFGKGSVMRLGDDSRP-PVQVIPTGSLALDVALGIGGLPRGRVIEI 74
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ALH +A AQ+ GG FIDAEHALDP A +GV T+NLL++QPD GEQ
Sbjct: 75 YGPESSGKTTVALHAVASAQKAGGNAAFIDAEHALDPVYARALGVDTDNLLVSQPDTGEQ 134
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D LIRSG +D++V+DSVAALVPK E++GEMGD+H+ +QARLMSQALRK++ +LS
Sbjct: 135 ALEIADMLIRSGGIDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITGALSA 194
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
+ T IFINQ+R K+ F FG P E T GG ALKFYASVR++++RI +K+ +G++
Sbjct: 195 TGTTAIFINQLREKIGVF-FGNP-ETTTGGKALKFYASVRIDVRRIETLKEAGAPVGNRT 252
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
KIVKNK+APPFK A+F++ +GKGISRE IID+ ++ K+G+ FTY D +GK
Sbjct: 253 RAKIVKNKMAPPFKQAEFDIVYGKGISREGSIIDMGVETGIIRKSGSWFTYGDDQLGQGK 312
Query: 303 EAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETVSTISPDSTDEEAA 361
E +QFL +N EL ++ +K++V V D + TE T S + D + E+A
Sbjct: 313 ENVRQFLSDN----PELANEIEQKILVSLG---IGVQDGELTEPTASDV--DDSLEDAG 362
>gi|95928608|ref|ZP_01311355.1| recA protein [Desulfuromonas acetoxidans DSM 684]
gi|95135398|gb|EAT17050.1| recA protein [Desulfuromonas acetoxidans DSM 684]
Length = 340
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 174/314 (55%), Positives = 241/314 (76%), Gaps = 3/314 (0%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
A+ A+ QI FGKGSIM LG R + +STGS LDIALG GG+P+GR++E+YGP
Sbjct: 9 AIDLAMGQIEKQFGKGSIMRLGEDNVMRDISTISTGSIGLDIALGIGGVPRGRIIEVYGP 68
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTTLALH++AEAQ++GG F+DAEHALD + A +GV ++LL++QPD GEQAL
Sbjct: 69 ESSGKTTLALHIVAEAQKKGGIAAFVDAEHALDITYARKLGVNADDLLVSQPDTGEQALE 128
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+V+ L+RSG++DV+VVDSVAALVP+ E++GEMGD+HM +QARLMSQALRKL+ ++S S
Sbjct: 129 IVEVLVRSGAIDVLVVDSVAALVPRAEIEGEMGDSHMGLQARLMSQALRKLTATISKSNC 188
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
+IFINQ+R K+ FG P E T GGNALKFY+SVR++I++I +K+G++ IGS+ VK
Sbjct: 189 CVIFINQIRMKIGVM-FGNP-ETTTGGNALKFYSSVRMDIRKIATLKQGQDVIGSRTRVK 246
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYND-RNFRGKEAF 305
+VKNK APPFK A+F++ +G+GIS+ E++DL + + +K+GA F+Y D R +G+E
Sbjct: 247 VVKNKTAPPFKEAEFDIMYGEGISKVGELVDLGVANDIVNKSGAWFSYGDERIGQGRENS 306
Query: 306 KQFLVENESVREEL 319
KQ+L +N V E+
Sbjct: 307 KQYLKDNAEVASEI 320
>gi|157369086|ref|YP_001477075.1| recombinase A [Serratia proteamaculans 568]
gi|166918716|sp|A8GA07.1|RECA_SERP5 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|157320850|gb|ABV39947.1| recA protein [Serratia proteamaculans 568]
Length = 353
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/317 (58%), Positives = 235/317 (74%), Gaps = 4/317 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A+ +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV++VDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+G+E +GS+
Sbjct: 185 NANTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKEGDEVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +KHK KAGA ++YN D+ +G
Sbjct: 243 TRVKVVKNKIAAPFKQAEFQILYGEGINSRGELVDLGVKHKMIEKAGAWYSYNGDKIGQG 302
Query: 302 KEAFKQFLVENESVREE 318
K FL EN +V E
Sbjct: 303 KANACNFLKENPAVAAE 319
>gi|377564098|ref|ZP_09793425.1| protein RecA [Gordonia sputi NBRC 100414]
gi|377528731|dbj|GAB38590.1| protein RecA [Gordonia sputi NBRC 100414]
Length = 347
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/325 (55%), Positives = 248/325 (76%), Gaps = 4/325 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
++ AL AL QI +FGKGS+M LG + + + V+ TGS ALD+ALG GGLP+GRVVEI
Sbjct: 8 REKALDLALAQIDKNFGKGSVMRLGEE-SRQPIEVIPTGSIALDVALGIGGLPRGRVVEI 66
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ALH +A AQ GG FIDAEHALDP A +GV T+ LL++QPD GEQ
Sbjct: 67 YGPESSGKTTVALHAVANAQAAGGIAAFIDAEHALDPDYAAKLGVDTDALLVSQPDTGEQ 126
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D LIRSG++D++V+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ +LS
Sbjct: 127 ALEIADMLIRSGALDILVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTSALSS 186
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+T IFINQ+R K+ FG P E T GG ALKFY+SVRL+++RI +K G + +G++
Sbjct: 187 SKTTAIFINQLREKIGVM-FGSP-ETTTGGKALKFYSSVRLDVRRIETLKDGTDAVGNRT 244
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRGK 302
VK+VKNK+APPFK A+F++ +G+GIS+E +ID+ + F K+G+ FTY D+ +GK
Sbjct: 245 RVKVVKNKVAPPFKQAEFDILYGQGISKEGSLIDMGVAEGFIRKSGSWFTYEGDQLGQGK 304
Query: 303 EAFKQFLVENESVREELVIKLREKL 327
E ++FL+EN +R+E+ K++EKL
Sbjct: 305 ENARKFLLENTDIRDEVEKKIKEKL 329
>gi|386842939|ref|YP_006247997.1| recombinase A [Streptomyces hygroscopicus subsp. jinggangensis
5008]
gi|374103240|gb|AEY92124.1| recombinase A [Streptomyces hygroscopicus subsp. jinggangensis
5008]
gi|451796231|gb|AGF66280.1| recombinase A [Streptomyces hygroscopicus subsp. jinggangensis
TL01]
Length = 378
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/330 (55%), Positives = 248/330 (75%), Gaps = 6/330 (1%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLG-RSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
+ ++ AL AL QI FGKG++M +G RS P + V+ TGS ALD+ALG GGLP+GRV
Sbjct: 7 TDREKALDAALAQIERQFGKGAVMRMGERSKEP--IEVIPTGSTALDVALGVGGLPRGRV 64
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
VEIYGPE+SGKTTL LH +A AQ+ GG F+DAEHALDP A +GV +NL+L+QPD
Sbjct: 65 VEIYGPESSGKTTLTLHAVANAQKAGGQVAFVDAEHALDPEYARKLGVDIDNLILSQPDN 124
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL +VD L+RSG++D++V+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ +
Sbjct: 125 GEQALEIVDMLVRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITSA 184
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
L+ S+T IFINQ+R K+ FG P E T GG ALKFYASVR++I+RI +K G E +G
Sbjct: 185 LNQSKTTAIFINQLREKIGVM-FGSP-ETTTGGRALKFYASVRIDIRRIETLKDGTEAVG 242
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNF 299
++ K+VKNK+APPFK A+F++ +G+GISRE +ID+ ++H F KAGA +TY D+
Sbjct: 243 NRTRCKVVKNKVAPPFKQAEFDILYGQGISREGGLIDMGVEHGFVRKAGAWYTYEGDQLG 302
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVV 329
+GKE + FL +N + E+ K++EKL V
Sbjct: 303 QGKENARNFLKDNPDLANEIEKKIKEKLGV 332
>gi|320534660|ref|ZP_08035104.1| protein RecA [Actinomyces sp. oral taxon 171 str. F0337]
gi|320133135|gb|EFW25639.1| protein RecA [Actinomyces sp. oral taxon 171 str. F0337]
Length = 412
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 180/318 (56%), Positives = 240/318 (75%), Gaps = 4/318 (1%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL AL QI SFGKGS+M LG P V V+ TGS ALD+ALG GGLP+GR++E+YGP
Sbjct: 13 ALATALAQIDKSFGKGSVMRLGDDTRP-PVSVIPTGSVALDVALGVGGLPRGRIIEVYGP 71
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTT+ALH +A AQR GG FIDAEHALDP A+ +GV +NLL++QPD GEQAL
Sbjct: 72 ESSGKTTVALHAVASAQRAGGNAAFIDAEHALDPVYAKALGVDIDNLLVSQPDTGEQALE 131
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ D L+RSG +D++V+DSVAALVPK E++GEMGD+H+ +QARLMSQALRK++ +LS + T
Sbjct: 132 ITDMLVRSGGLDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITGALSSTGT 191
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
IFINQ+R K+ F FG P E T GG ALKFYASVRL+++RIG +K G++ +G++ VK
Sbjct: 192 TAIFINQLREKIGVF-FGNP-ETTTGGKALKFYASVRLDVRRIGGLKDGDQPVGNRTRVK 249
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGKEAF 305
+VKNK+APPFK A+F++ +G+GISRE ++DL + + K+GA FTY D+ +GKE
Sbjct: 250 VVKNKMAPPFKQAEFDILYGQGISREGSLLDLGVDNGVVRKSGAWFTYGEDQLGQGKENA 309
Query: 306 KQFLVENESVREELVIKL 323
+ FL +N + E+ K+
Sbjct: 310 RNFLKDNPQLAAEIEEKI 327
>gi|146424975|emb|CAM12596.1| recombinase A [Ochrobactrum anthropi]
Length = 299
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 179/299 (59%), Positives = 230/299 (76%), Gaps = 3/299 (1%)
Query: 11 ALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASG 70
AL QI +FGKGSIM LG++ + V TGS +LDIALG GGLPKGR+VEIYGPE+SG
Sbjct: 3 ALSQIERAFGKGSIMRLGKNAPVIEIETVPTGSLSLDIALGVGGLPKGRIVEIYGPESSG 62
Query: 71 KTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSLVDT 130
KTTLALH IAEAQ +GG C F+DAEHALDP A +GV ENLL++QPD GEQAL + DT
Sbjct: 63 KTTLALHTIAEAQXKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQALEITDT 122
Query: 131 LIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIF 190
L+RSG++DV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S S ++IF
Sbjct: 123 LVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISRSNCMVIF 182
Query: 191 INQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVKIVKN 250
INQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+ +E +G+Q VK+VKN
Sbjct: 183 INQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKERDEVVGNQTRVKVVKN 240
Query: 251 KLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGKEAFKQF 308
KLAPPFK +F++ +G G+S+ E++DL +K K+GA F+YN + +G+E KQ+
Sbjct: 241 KLAPPFKQVEFDIMYGAGVSKTGELVDLGVKAGVVEKSGAWFSYNSQRLGQGRENAKQY 299
>gi|358448377|ref|ZP_09158881.1| recombinase A [Marinobacter manganoxydans MnI7-9]
gi|357227474|gb|EHJ05935.1| recombinase A [Marinobacter manganoxydans MnI7-9]
Length = 348
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/337 (54%), Positives = 246/337 (72%), Gaps = 7/337 (2%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRH-VPVVSTGSFALDIALGTGGLPKGRVVEIYG 65
AL AL QI FGKG++M +G PR +P VSTGS LD+ALG GGLP GR+ EIYG
Sbjct: 8 ALSAALGQIERQFGKGAVMKMGDQ--PREAIPAVSTGSLGLDVALGIGGLPYGRICEIYG 65
Query: 66 PEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQAL 125
PE+SGKTTL L VIAEAQ+ G C F+DAEHALDP AE +GV ++LL++QPD GEQAL
Sbjct: 66 PESSGKTTLTLQVIAEAQKAGKTCAFVDAEHALDPVYAEKLGVNVDDLLVSQPDTGEQAL 125
Query: 126 SLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQ 185
+ D L+RS +VDV++VDSVAAL PK E++GEMGD+H+ +QARLMSQALRKL+ ++ +
Sbjct: 126 EIADMLVRSNAVDVIIVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTGNVKHAN 185
Query: 186 TILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAV 245
++IFINQ+R K+ FG P E T GGNALKFY+SVRL+I+RIG VK G+E +G++ V
Sbjct: 186 CLMIFINQIRMKIGVM-FGSP-ETTTGGNALKFYSSVRLDIRRIGAVKDGDEVVGNETRV 243
Query: 246 KIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGKEA 304
K+VKNK++PPFK A+F++ +GKGI +E++D+ +K F K+GA + YN D+ +GK
Sbjct: 244 KVVKNKVSPPFKQAEFQIMYGKGIYHMAEVLDMGVKEGFVDKSGAWYAYNGDKIGQGKAN 303
Query: 305 FKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDE 341
+FL EN + E+ K+R+KL + EP+ +E
Sbjct: 304 ACKFLEENMDIANEIEAKVRDKL-MPKPEPKKDAKEE 339
>gi|385330789|ref|YP_005884740.1| recombinase A [Marinobacter adhaerens HP15]
gi|311693939|gb|ADP96812.1| recombinase A [Marinobacter adhaerens HP15]
Length = 348
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/337 (54%), Positives = 246/337 (72%), Gaps = 7/337 (2%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRH-VPVVSTGSFALDIALGTGGLPKGRVVEIYG 65
AL AL QI FGKG++M +G PR +P VSTGS LD+ALG GGLP GR+ EIYG
Sbjct: 8 ALSAALGQIERQFGKGAVMKMGDQ--PREAIPAVSTGSLGLDVALGIGGLPYGRICEIYG 65
Query: 66 PEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQAL 125
PE+SGKTTL L VIAEAQ+ G C F+DAEHALDP AE +GV ++LL++QPD GEQAL
Sbjct: 66 PESSGKTTLTLQVIAEAQKAGKTCAFVDAEHALDPVYAEKLGVNVDDLLVSQPDTGEQAL 125
Query: 126 SLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQ 185
+ D L+RS +VDV++VDSVAAL PK E++GEMGD+H+ +QARLMSQALRKL+ ++ +
Sbjct: 126 EIADMLVRSNAVDVIIVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTGNVKHAN 185
Query: 186 TILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAV 245
++IFINQ+R K+ FG P E T GGNALKFY+SVRL+I+RIG VK G+E +G++ V
Sbjct: 186 CLMIFINQIRMKIGVM-FGSP-ETTTGGNALKFYSSVRLDIRRIGAVKDGDEVVGNETRV 243
Query: 246 KIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGKEA 304
K+VKNK++PPFK A+F++ +GKGI +E++D+ +K F K+GA + YN D+ +GK
Sbjct: 244 KVVKNKVSPPFKQAEFQIMYGKGIYHMAEVLDMGVKEGFVDKSGAWYAYNGDKIGQGKAN 303
Query: 305 FKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDE 341
+FL EN + E+ K+R+KL + EP+ +E
Sbjct: 304 ACKFLEENMDIANEIEAKVRDKL-MPKPEPRKDAKEE 339
>gi|206602303|gb|EDZ38784.1| RecA protein [Leptospirillum sp. Group II '5-way CG']
Length = 360
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/330 (55%), Positives = 252/330 (76%), Gaps = 7/330 (2%)
Query: 3 KKDLALQQALD----QITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKG 58
++D A Q++LD QI FGKGSIM LG+ P+ VPV+ +GS ALDIALG GG P+G
Sbjct: 4 ERDQARQKSLDLALSQIEKQFGKGSIMRLGKDQVPQIVPVIPSGSLALDIALGIGGYPRG 63
Query: 59 RVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQP 118
RVVE+YGPE+SGKTTLALH I+E + GG FIDAEHALD + A+ +GV+TE+LL+AQP
Sbjct: 64 RVVELYGPESSGKTTLALHAISEVHKAGGVAAFIDAEHALDVTYAKRLGVRTEDLLIAQP 123
Query: 119 DCGEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLS 178
D GEQAL + +TL+RSGS+D++VVDSVAALVP+ EL+GEMGDAH+ +QARLMSQALRKL+
Sbjct: 124 DTGEQALEITETLVRSGSIDLIVVDSVAALVPRAELEGEMGDAHVGLQARLMSQALRKLT 183
Query: 179 HSLSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEET 238
++S S T ++FINQ+R K+ FG P E T GGNALKFYASVR++I+RI +K+G++
Sbjct: 184 SAISKSNTTVLFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRMDIRRIESIKEGDQV 241
Query: 239 IGSQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDR 297
+G++I VK+VKNK+APPF+ A+F++ F +GIS E+IDL + + K+GA ++ ++R
Sbjct: 242 LGNRIRVKVVKNKMAPPFRQAEFDISFNEGISTVGELIDLGVDNGILEKSGAWYSMGSER 301
Query: 298 NFRGKEAFKQFLVENESVREELVIKLREKL 327
+GKEA K +L + +++ ++R K+
Sbjct: 302 LGQGKEAVKLYLKNHPDAFKKIEQEIRSKI 331
>gi|118618697|ref|YP_907029.1| recombinase A [Mycobacterium ulcerans Agy99]
gi|166220657|sp|A0PT89.1|RECA_MYCUA RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|118570807|gb|ABL05558.1| recombinase A RecA [Mycobacterium ulcerans Agy99]
Length = 346
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/325 (56%), Positives = 245/325 (75%), Gaps = 4/325 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
++ AL+ A+ QI S+GKGS+M LG V + + ++ TGS ALD+ALG GGLP+GRV+EI
Sbjct: 7 REKALELAMAQIEKSYGKGSVMRLGDEVR-QPISIIPTGSIALDVALGIGGLPRGRVIEI 65
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ALH +A AQ GG FIDAEHALDP A+ +GV T++LL++QPD GEQ
Sbjct: 66 YGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPEYAKKLGVDTDSLLVSQPDTGEQ 125
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL +VD LIRSG++D+VV+DSVAALVP+ EL+GEMGD+H+ +QARLMSQALRK++ +L+
Sbjct: 126 ALEIVDMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMTGALNN 185
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T IFINQ+R K+ FG P E T GG ALKFYASVR++++RI +K G +G++
Sbjct: 186 SGTTAIFINQLRDKIGVM-FGSP-ETTTGGKALKFYASVRMDVRRIETLKDGTNAVGNRT 243
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VKIVKNK++PPFK A+F++ +G+GISRE +ID+ + F K+GA FTY +GK
Sbjct: 244 RVKIVKNKVSPPFKQAEFDILYGRGISREGSLIDMGVDQGFIRKSGAWFTYEGEQLGQGK 303
Query: 303 EAFKQFLVENESVREELVIKLREKL 327
E + FL+EN V E+ K++EKL
Sbjct: 304 ENARNFLLENGGVANEIEKKIKEKL 328
>gi|381183450|ref|ZP_09892184.1| recombinase A [Listeriaceae bacterium TTU M1-001]
gi|380316653|gb|EIA20038.1| recombinase A [Listeriaceae bacterium TTU M1-001]
Length = 349
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 179/343 (52%), Positives = 253/343 (73%), Gaps = 4/343 (1%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
M+ + AL QAL I FGKGSIM LG + +++ VS+GS ALDIALG GG P+GR+
Sbjct: 1 MNDRQAALDQALKSIEKQFGKGSIMKLGEH-SDQNISTVSSGSLALDIALGVGGYPRGRI 59
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+E YGPE+SGKTT+ALH IAE Q+QGG FIDAEHALDP+ A+ +GV + LLL+QPD
Sbjct: 60 IETYGPESSGKTTVALHAIAEVQKQGGTAAFIDAEHALDPTYAKNLGVNIDELLLSQPDT 119
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + + L+RSG+VD++V+DSVAALVP+ E++GEMGDAH+ +QARLMSQALRKLS
Sbjct: 120 GEQALEIAEALVRSGAVDILVIDSVAALVPRAEIEGEMGDAHVGLQARLMSQALRKLSGV 179
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
++ S+TI IFINQ+R K+ FG P E T GG ALKFY++VRL ++R +K+G + IG
Sbjct: 180 INKSKTIAIFINQIREKVGVM-FGNP-ETTPGGRALKFYSTVRLEVRRAEQLKQGTDVIG 237
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF- 299
++ +K+VKNK+APPF+ A+ ++ +G+GISRE E++D+A + +K+G+ ++YN+
Sbjct: 238 NKTKIKVVKNKVAPPFRVAEVDIMYGEGISREGELVDMASEVDVINKSGSWYSYNEERIG 297
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDED 342
+G+E KQFL E+ +R+E+ ++R + +D Q + D D
Sbjct: 298 QGRENAKQFLKEHPEIRDEISKRVRMEYDIDVTGEQASAPDAD 340
>gi|336179435|ref|YP_004584810.1| protein recA [Frankia symbiont of Datisca glomerata]
gi|334860415|gb|AEH10889.1| Protein recA [Frankia symbiont of Datisca glomerata]
Length = 345
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/325 (55%), Positives = 244/325 (75%), Gaps = 4/325 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
++ AL+ AL QI FGKGS+M LG P V V+ TGS ALD+ALG GGLP+GRVVEI
Sbjct: 6 REKALENALAQIDKQFGKGSVMRLGDDTRP-PVQVIPTGSIALDVALGIGGLPRGRVVEI 64
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ALH +A AQ GG FIDAEHALDP A +GV T+ LL++QPD GEQ
Sbjct: 65 YGPESSGKTTVALHAVANAQAAGGIAAFIDAEHALDPDYAAKLGVNTDALLVSQPDTGEQ 124
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D LIRSG++D++V+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRKL+ +LS
Sbjct: 125 ALEIADMLIRSGAIDIIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLTGALSH 184
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T IFINQ+R K+ FG P E T GG ALKFYASVRL+++RI +K G + +G++
Sbjct: 185 SGTTAIFINQLREKVGVM-FGSP-ETTTGGKALKFYASVRLDVRRIETLKDGTDAVGNRT 242
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGK 302
VK+VKNK+APPF+TA+F++ +G GISRE +ID+ ++ K+GA +TY+ D+ +GK
Sbjct: 243 RVKVVKNKMAPPFRTAEFDIVYGGGISREGSLIDMGVEQGIIRKSGAWYTYDGDQLGQGK 302
Query: 303 EAFKQFLVENESVREELVIKLREKL 327
E + F+ +N + +E+ +++EKL
Sbjct: 303 ENARSFMRDNPDIADEIEKRIKEKL 327
>gi|86160380|ref|YP_467165.1| RecA protein [Anaeromyxobacter dehalogenans 2CP-C]
gi|85776891|gb|ABC83728.1| RecA protein [Anaeromyxobacter dehalogenans 2CP-C]
Length = 358
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/334 (55%), Positives = 250/334 (74%), Gaps = 5/334 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGR-SVTPRHVPVVSTGSFALDIALGTGGLPKGRVV 61
+K+ A++ A+ I +FGKGSIM LG + V VSTG+ +LDIALG GG P+GR++
Sbjct: 6 EKEKAIELAVASIEKAFGKGSIMRLGNEDALVKDVQAVSTGAISLDIALGVGGFPRGRII 65
Query: 62 EIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCG 121
EIYGPE+SGKTTLALH IAEAQR+GG F+DAEHALD A +GV+T++LL++QPD G
Sbjct: 66 EIYGPESSGKTTLALHAIAEAQRRGGIAAFVDAEHALDVGYARKLGVRTDDLLISQPDSG 125
Query: 122 EQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSL 181
EQAL +V+TL+RSG++DV+VVDSVAALVPK EL+GEMGDAHM +QARLMSQALRKL+ ++
Sbjct: 126 EQALEIVETLVRSGAIDVLVVDSVAALVPKAELEGEMGDAHMGVQARLMSQALRKLTGTI 185
Query: 182 SLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGS 241
S S TI+IFINQ+R K+ FG P E T GGNALKFYAS RL+I+RIG +K G+ IG+
Sbjct: 186 SKSSTIVIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASQRLDIRRIGAIKDGDSVIGN 243
Query: 242 QIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFR 300
+ VK+VKNK+APPFK +F++ +G GISRE +++DLA K+G F++ +R +
Sbjct: 244 RTRVKVVKNKVAPPFKEVEFDIMYGHGISREGDVLDLASNEGIVEKSGTWFSFGGERIGQ 303
Query: 301 GKEAFKQFLVENESVREELVIKLREKLVVDHKEP 334
G+E K F E+ + +++ +L EK + H+ P
Sbjct: 304 GREQTKAFFREHPEILQQVEARLFEKFGI-HRGP 336
>gi|158313071|ref|YP_001505579.1| recombinase A [Frankia sp. EAN1pec]
gi|158108476|gb|ABW10673.1| recA protein [Frankia sp. EAN1pec]
Length = 347
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/325 (56%), Positives = 243/325 (74%), Gaps = 4/325 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
+D AL+ AL QI FGKGS+M LG P + + TGS ALD+ALG GGLP+GRVVEI
Sbjct: 6 RDKALENALAQIDKQFGKGSVMRLGDDTRP-PIQAIPTGSIALDVALGIGGLPRGRVVEI 64
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ALH +A AQ GG FIDAEHALDP A +GV T+ LL++QPD GEQ
Sbjct: 65 YGPESSGKTTVALHAVANAQAAGGIAAFIDAEHALDPEYAGKLGVDTDALLVSQPDTGEQ 124
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D LIRSG++DV+V+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ +L+
Sbjct: 125 ALEIADMLIRSGALDVIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITGALAN 184
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T IFINQ+R K+ FG P E T GG ALKFYASVRL+++RI +K G E +G++
Sbjct: 185 SGTTAIFINQLREKVGVM-FGSP-ETTTGGKALKFYASVRLDVRRIETLKDGTEAVGNRT 242
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGK 302
VK+VKNK+APPF+TA+F++ +G GISRE +ID+ ++H K+GA +TY+ D+ +GK
Sbjct: 243 RVKVVKNKMAPPFRTAEFDIVYGGGISREGSLIDMGVEHGIIRKSGAWYTYDGDQLGQGK 302
Query: 303 EAFKQFLVENESVREELVIKLREKL 327
E + FL +N + E+ +++EKL
Sbjct: 303 ENARSFLRDNPDLANEIEKRIKEKL 327
>gi|345300552|ref|YP_004829910.1| protein recA [Enterobacter asburiae LF7a]
gi|345094489|gb|AEN66125.1| Protein recA [Enterobacter asburiae LF7a]
Length = 352
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 192/346 (55%), Positives = 244/346 (70%), Gaps = 4/346 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV+VVDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+GE +GS+
Sbjct: 185 QSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKEGENVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +K K KAGA ++YN D+ +G
Sbjct: 243 TRVKVVKNKIAAPFKQAEFQILYGEGINFFGELVDLGVKEKLIEKAGAWYSYNGDKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEET 347
K +L +N + +E+ K+RE L+ + D EET
Sbjct: 303 KANAISWLKDNPAAAKEIEKKVRELLLNNQDSTPDFAVDGADVEET 348
>gi|146424879|emb|CAM12548.1| recombinase A [Ochrobactrum anthropi]
Length = 298
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 179/298 (60%), Positives = 230/298 (77%), Gaps = 3/298 (1%)
Query: 11 ALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASG 70
AL QI +FGKGSIM LG++ + V TGS +LDIALG GGLPKGR+VEIYGPE+SG
Sbjct: 3 ALSQIERAFGKGSIMRLGKNAPVIEIETVPTGSLSLDIALGVGGLPKGRIVEIYGPESSG 62
Query: 71 KTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSLVDT 130
KTTLALH IAEAQ++GG C F+DAEHALDP A +GV ENLL++QPD GEQAL + DT
Sbjct: 63 KTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQALEITDT 122
Query: 131 LIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIF 190
L+RSG++DV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S S ++IF
Sbjct: 123 LVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISRSNCMVIF 182
Query: 191 INQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVKIVKN 250
INQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+ +E +G+Q VK+VKN
Sbjct: 183 INQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKERDEVVGNQTRVKVVKN 240
Query: 251 KLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGKEAFKQ 307
KLAPPFK +F++ +G G+S+ E++DL +K K+GA F+YN + +G+E KQ
Sbjct: 241 KLAPPFKQVEFDIMYGAGVSKTGELVDLGVKAGVVEKSGAWFSYNSQRLGQGRENAKQ 298
>gi|145224556|ref|YP_001135234.1| recombinase A [Mycobacterium gilvum PYR-GCK]
gi|315444887|ref|YP_004077766.1| protein RecA [Mycobacterium gilvum Spyr1]
gi|189039598|sp|A4TCL7.1|RECA_MYCGI RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|145217042|gb|ABP46446.1| recA protein [Mycobacterium gilvum PYR-GCK]
gi|315263190|gb|ADT99931.1| protein RecA [Mycobacterium gilvum Spyr1]
Length = 350
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 180/325 (55%), Positives = 246/325 (75%), Gaps = 4/325 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
++ AL+ AL QI +FGKGS+M LG V P + V+ TGS ALD+ALG GGLP+GRV+EI
Sbjct: 8 REKALELALAQIDKNFGKGSVMRLGEDVRP-PIAVIPTGSIALDVALGIGGLPRGRVIEI 66
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ALH +A AQ GG FIDAEHALDP A+ +GV T+ LL++QPD GEQ
Sbjct: 67 YGPESSGKTTVALHAVANAQAAGGIAAFIDAEHALDPDYAKKLGVDTDALLVSQPDTGEQ 126
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D LIRSG++D++V+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ +L+
Sbjct: 127 ALEIADMLIRSGALDILVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTGALNN 186
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T IFINQ+R K+ FG P E T GG ALKFY+SVRL+++RI +K G + +G++
Sbjct: 187 SGTTAIFINQLREKIGVM-FGSP-ETTTGGKALKFYSSVRLDVRRIETLKDGTDAVGNRT 244
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK++PPFK A+F++ +GKGISRE +ID+ ++ F K+G+ FTY+ +GK
Sbjct: 245 RVKVVKNKVSPPFKQAEFDILYGKGISREGSLIDMGVEQGFIRKSGSWFTYDGEQLGQGK 304
Query: 303 EAFKQFLVENESVREELVIKLREKL 327
E + FL++N V E+ K++EKL
Sbjct: 305 ENARNFLLQNPDVGNEIEKKIKEKL 329
>gi|379023275|ref|YP_005299936.1| recombinase A [Rickettsia canadensis str. CA410]
gi|376324213|gb|AFB21454.1| recombinase A [Rickettsia canadensis str. CA410]
Length = 343
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 190/327 (58%), Positives = 249/327 (76%), Gaps = 6/327 (1%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPR-HVPVVSTGSFALDIALGTGGLPKGRV 60
+ K+ A+ AL QI S+GKGS+M LG+ P + VSTGS LD+ALG GG+PKGR+
Sbjct: 4 TDKERAIAAALAQIEKSYGKGSVMKLGQR--PNIDIEAVSTGSLGLDMALGIGGVPKGRI 61
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+EI+GPE+SGKTTL LH+IAEAQ++GG C FIDAEHALDP+ A+ +GV + L+++QPD
Sbjct: 62 IEIFGPESSGKTTLTLHLIAEAQKKGGTCAFIDAEHALDPAYAKKLGVNIDELIISQPDT 121
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + DTLIRSG +D+V++DSVAALVPK E++GEMGDA MA QARLMSQALRKL+ S
Sbjct: 122 GEQALEITDTLIRSGGIDMVIIDSVAALVPKSEIEGEMGDAQMASQARLMSQALRKLTAS 181
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
+S + I +FINQ+R K+ FG P E T GGNALKFYASVR++I+RIG +K EE IG
Sbjct: 182 ISRTNCIAVFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRIDIRRIGSIKDKEEVIG 239
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYND-RNF 299
SQ VK+VKNK++PPFKTA F++ +G GIS+E EIIDL +K K+G+ F+YN+ R
Sbjct: 240 SQTKVKVVKNKVSPPFKTADFDIMYGSGISKEGEIIDLGIKLDIVEKSGSWFSYNNVRIG 299
Query: 300 RGKEAFKQFLVENESVREELVIKLREK 326
+G+E KQ+L E+ + E+ +REK
Sbjct: 300 QGRENVKQYLKEHPQIANEIEKIIREK 326
>gi|24214879|ref|NP_712360.1| recombinase A [Leptospira interrogans serovar Lai str. 56601]
gi|45657611|ref|YP_001697.1| recombinase A [Leptospira interrogans serovar Copenhageni str.
Fiocruz L1-130]
gi|386074237|ref|YP_005988554.1| recombinase A [Leptospira interrogans serovar Lai str. IPAV]
gi|417760909|ref|ZP_12408923.1| RecA protein [Leptospira interrogans str. 2002000624]
gi|417763902|ref|ZP_12411875.1| RecA protein [Leptospira interrogans serovar Bulgarica str.
Mallika]
gi|417768483|ref|ZP_12416411.1| RecA protein [Leptospira interrogans serovar Pomona str. Pomona]
gi|417773525|ref|ZP_12421402.1| RecA protein [Leptospira interrogans str. 2002000621]
gi|417783061|ref|ZP_12430784.1| RecA protein [Leptospira interrogans str. C10069]
gi|418668034|ref|ZP_13229439.1| RecA protein [Leptospira interrogans serovar Pyrogenes str.
2006006960]
gi|418672694|ref|ZP_13234030.1| RecA protein [Leptospira interrogans str. 2002000623]
gi|418681201|ref|ZP_13242434.1| RecA protein [Leptospira interrogans serovar Pomona str. Kennewicki
LC82-25]
gi|418692587|ref|ZP_13253665.1| RecA protein [Leptospira interrogans str. FPW2026]
gi|418701033|ref|ZP_13261968.1| RecA protein [Leptospira interrogans serovar Bataviae str. L1111]
gi|418703472|ref|ZP_13264356.1| RecA protein [Leptospira interrogans serovar Hebdomadis str. R499]
gi|418711119|ref|ZP_13271885.1| RecA protein [Leptospira interrogans serovar Grippotyphosa str. UI
08368]
gi|418717850|ref|ZP_13277389.1| RecA protein [Leptospira interrogans str. UI 08452]
gi|418726703|ref|ZP_13285314.1| RecA protein [Leptospira interrogans str. UI 12621]
gi|418733479|ref|ZP_13290603.1| RecA protein [Leptospira interrogans str. UI 12758]
gi|421085799|ref|ZP_15546650.1| RecA protein [Leptospira santarosai str. HAI1594]
gi|421102804|ref|ZP_15563408.1| RecA protein [Leptospira interrogans serovar Icterohaemorrhagiae
str. Verdun LP]
gi|421116798|ref|ZP_15577173.1| RecA protein [Leptospira interrogans serovar Canicola str. Fiocruz
LV133]
gi|421121112|ref|ZP_15581411.1| RecA protein [Leptospira interrogans str. Brem 329]
gi|421124114|ref|ZP_15584384.1| RecA protein [Leptospira interrogans serovar Grippotyphosa str.
2006006986]
gi|421134691|ref|ZP_15594824.1| RecA protein [Leptospira interrogans serovar Grippotyphosa str.
Andaman]
gi|26454660|sp|P52277.2|RECA_LEPIN RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|60392994|sp|P62217.1|RECA_LEPIC RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|24195902|gb|AAN49378.1| recombinase A [Leptospira interrogans serovar Lai str. 56601]
gi|45600851|gb|AAS70334.1| recombinase A [Leptospira interrogans serovar Copenhageni str.
Fiocruz L1-130]
gi|353458026|gb|AER02571.1| recombinase A [Leptospira interrogans serovar Lai str. IPAV]
gi|400327022|gb|EJO79278.1| RecA protein [Leptospira interrogans serovar Pomona str. Kennewicki
LC82-25]
gi|400353734|gb|EJP05887.1| RecA protein [Leptospira interrogans serovar Bulgarica str.
Mallika]
gi|400357820|gb|EJP13940.1| RecA protein [Leptospira interrogans str. FPW2026]
gi|409942903|gb|EKN88506.1| RecA protein [Leptospira interrogans str. 2002000624]
gi|409949456|gb|EKN99432.1| RecA protein [Leptospira interrogans serovar Pomona str. Pomona]
gi|409953762|gb|EKO08258.1| RecA protein [Leptospira interrogans str. C10069]
gi|409960613|gb|EKO24367.1| RecA protein [Leptospira interrogans str. UI 12621]
gi|410011608|gb|EKO69724.1| RecA protein [Leptospira interrogans serovar Canicola str. Fiocruz
LV133]
gi|410021275|gb|EKO88067.1| RecA protein [Leptospira interrogans serovar Grippotyphosa str.
Andaman]
gi|410345940|gb|EKO96984.1| RecA protein [Leptospira interrogans str. Brem 329]
gi|410367918|gb|EKP23302.1| RecA protein [Leptospira interrogans serovar Icterohaemorrhagiae
str. Verdun LP]
gi|410431364|gb|EKP75724.1| RecA protein [Leptospira santarosai str. HAI1594]
gi|410438601|gb|EKP87687.1| RecA protein [Leptospira interrogans serovar Grippotyphosa str.
2006006986]
gi|410576613|gb|EKQ39618.1| RecA protein [Leptospira interrogans str. 2002000621]
gi|410580382|gb|EKQ48207.1| RecA protein [Leptospira interrogans str. 2002000623]
gi|410756479|gb|EKR18104.1| RecA protein [Leptospira interrogans serovar Pyrogenes str.
2006006960]
gi|410759931|gb|EKR26133.1| RecA protein [Leptospira interrogans serovar Bataviae str. L1111]
gi|410766608|gb|EKR37291.1| RecA protein [Leptospira interrogans serovar Hebdomadis str. R499]
gi|410768719|gb|EKR43966.1| RecA protein [Leptospira interrogans serovar Grippotyphosa str. UI
08368]
gi|410773088|gb|EKR53119.1| RecA protein [Leptospira interrogans str. UI 12758]
gi|410786723|gb|EKR80461.1| RecA protein [Leptospira interrogans str. UI 08452]
gi|455669094|gb|EMF34262.1| RecA protein [Leptospira interrogans serovar Pomona str. Fox 32256]
gi|456821726|gb|EMF70232.1| RecA protein [Leptospira interrogans serovar Canicola str. LT1962]
gi|456967006|gb|EMG08463.1| RecA protein [Leptospira interrogans serovar Grippotyphosa str.
LT2186]
gi|456984149|gb|EMG20274.1| RecA protein [Leptospira interrogans serovar Copenhageni str.
LT2050]
Length = 366
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 176/313 (56%), Positives = 238/313 (76%), Gaps = 3/313 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K LA++QA+ QI FGKGSIM LG + V V+ +GS LDIALG GG P GR+VEI
Sbjct: 20 KKLAIEQAMSQIEKQFGKGSIMKLGSDSAKQTVQVIPSGSLDLDIALGIGGYPIGRIVEI 79
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L IAEAQ++GG FIDAEHALDPS A+ +GV + LL++QPD GE+
Sbjct: 80 YGPESSGKTTLTLSAIAEAQKRGGVAAFIDAEHALDPSYAKKLGVNIDELLVSQPDNGEE 139
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + ++L+RS ++D++V+DSVAALVPK E++G+MGD+HM +QARLMSQALRKL+ +++
Sbjct: 140 ALEICESLVRSNAIDLIVIDSVAALVPKAEIEGDMGDSHMGLQARLMSQALRKLTGTIAK 199
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+T++IFINQ+R K+ FG P E T GGNALKFY SVRL+I++I +K+ EE++G+++
Sbjct: 200 SKTVVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYCSVRLDIRKIETIKEKEESVGNRV 257
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK APPFK A+F++ F GISRE ++DL +KH KAGA ++YN +GK
Sbjct: 258 RVKVVKNKCAPPFKQAEFDIIFNAGISREGSLVDLGVKHDIIHKAGAWYSYNTEKIGQGK 317
Query: 303 EAFKQFLVENESV 315
EA K++L N +
Sbjct: 318 EAAKEYLKNNPEI 330
>gi|307690446|ref|ZP_07632892.1| recombinase A [Clostridium cellulovorans 743B]
Length = 350
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/354 (52%), Positives = 258/354 (72%), Gaps = 12/354 (3%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
A+Q A+ QI FGKG+IM LG + + V + TG ALD+ALG GG+P+GR+VEIYGP
Sbjct: 8 AIQAAMTQIEKQFGKGAIMTLGEN-SILDVDSIPTGCLALDVALGIGGVPRGRIVEIYGP 66
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTT+ALHV+AEAQ+QGG FID EHALDP+ A +GV TE+L+++QPD GEQAL
Sbjct: 67 ESSGKTTVALHVVAEAQKQGGAAAFIDVEHALDPAYARRVGVNTEDLIVSQPDTGEQALE 126
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ + L+RSG+VDVV+VDSVAALVPK E++GEMGDAH+ +QARLMSQALRKL+ S++ S+
Sbjct: 127 ITEALVRSGAVDVVIVDSVAALVPKAEIEGEMGDAHVGLQARLMSQALRKLAGSINKSKC 186
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
++IFINQ+R K+ FG P E T GG ALKFYASVRL+I++ +K+GE+ +G++ +K
Sbjct: 187 VVIFINQLREKVGIM-FGNP-ETTPGGRALKFYASVRLDIRKTDSIKQGEDVLGNRTKIK 244
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYND-RNFRGKEAF 305
++KNK+APPFK A+F++ + +GIS+ I+D+ +K + K+GA F+Y D R +G+E
Sbjct: 245 VIKNKVAPPFKLAEFDIMYNEGISKSGNILDVGVKEEIVQKSGAWFSYGDIRLGQGRENA 304
Query: 306 KQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETVSTISPDSTDEE 359
KQF VEN + E+ K+REK + P ++D E V+ D DE+
Sbjct: 305 KQFFVENPELALEVENKIREK----YNMPLIGLSDISKATEIVT----DELDED 350
>gi|118472151|ref|YP_887057.1| recombinase A [Mycobacterium smegmatis str. MC2 155]
gi|399987070|ref|YP_006567419.1| protein recA [Mycobacterium smegmatis str. MC2 155]
gi|441207651|ref|ZP_20973591.1| protein RecA [Mycobacterium smegmatis MKD8]
gi|2500086|sp|Q59560.1|RECA_MYCS2 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|34811308|pdb|1UBC|A Chain A, Structure Of Reca Protein
gi|34811309|pdb|1UBE|A Chain A, Msreca-Adp Complex
gi|34811310|pdb|1UBF|A Chain A, Msreca-Atpgs Complex
gi|34811311|pdb|1UBG|A Chain A, Msreca-Datp Complex
gi|109157789|pdb|2G88|A Chain A, Msreca-datp Complex
gi|150261332|pdb|2ODN|A Chain A, Msreca-Datp Complex
gi|150261333|pdb|2ODW|A Chain A, Msreca-Atp-Gama-S Complex
gi|150261334|pdb|2OE2|A Chain A, Msreca-Native-Low Humidity 95%
gi|150261335|pdb|2OEP|A Chain A, Msreca-adp-complex
gi|150261336|pdb|2OES|A Chain A, Msreca-Native-Ssb
gi|150261337|pdb|2OFO|A Chain A, Msreca-native
gi|217035314|pdb|2ZR7|A Chain A, Msreca Native Form Ii'
gi|217035328|pdb|2ZRM|A Chain A, Msreca Datp Form Iv
gi|217035329|pdb|2ZRN|A Chain A, Msreca Form Iv
gi|217035330|pdb|2ZRO|A Chain A, Msreca Adp Form Iv
gi|217035331|pdb|2ZRP|A Chain A, Msreca Datp Form Ii'
gi|1430892|emb|CAA67597.1| RecA protein [Mycobacterium smegmatis str. MC2 155]
gi|42416901|gb|AAS16332.1| RecA [Mycobacterium smegmatis]
gi|118173438|gb|ABK74334.1| protein RecA [Mycobacterium smegmatis str. MC2 155]
gi|399231631|gb|AFP39124.1| Protein recA [Mycobacterium smegmatis str. MC2 155]
gi|440627834|gb|ELQ89639.1| protein RecA [Mycobacterium smegmatis MKD8]
Length = 349
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 178/325 (54%), Positives = 248/325 (76%), Gaps = 4/325 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
++ AL+ A+ QI +FGKGS+M LG V + + V+ TGS +LD+ALG GGLP+GRV+EI
Sbjct: 8 REKALELAMAQIDKNFGKGSVMRLGEEVR-QPISVIPTGSISLDVALGIGGLPRGRVIEI 66
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ALH +A AQ GG FIDAEHALDP A+ +GV T++LL++QPD GEQ
Sbjct: 67 YGPESSGKTTVALHAVANAQAAGGIAAFIDAEHALDPEYAKKLGVDTDSLLVSQPDTGEQ 126
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RSG++D++V+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ +L+
Sbjct: 127 ALEIADMLVRSGALDIIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTGALNN 186
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T IFINQ+R K+ FG P E T GG ALKFYASVRL+++RI +K G + +G++
Sbjct: 187 SGTTAIFINQLREKIGVM-FGSP-ETTTGGKALKFYASVRLDVRRIETLKDGTDAVGNRT 244
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK++PPFK A+F++ +G+GISRE +ID+ ++H F K+G+ FTY +GK
Sbjct: 245 RVKVVKNKVSPPFKQAEFDILYGQGISREGSLIDMGVEHGFIRKSGSWFTYEGEQLGQGK 304
Query: 303 EAFKQFLVENESVREELVIKLREKL 327
E ++FL+EN V E+ K++EKL
Sbjct: 305 ENARKFLLENTDVANEIEKKIKEKL 329
>gi|425735453|ref|ZP_18853767.1| recA protein [Brevibacterium casei S18]
gi|425479859|gb|EKU47031.1| recA protein [Brevibacterium casei S18]
Length = 361
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/349 (53%), Positives = 257/349 (73%), Gaps = 6/349 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI ++GKG+IM LG V + + TGS +LDIALG GGLP+GRVVEI
Sbjct: 16 KSKALDAALGQIDRNYGKGAIMRLGEGVR-EPIESIPTGSVSLDIALGIGGLPRGRVVEI 74
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ALH +A AQ+ GG FIDAEHALDP A+ +GV T+ LL++QPD GEQ
Sbjct: 75 YGPESSGKTTVALHAVANAQKAGGIAAFIDAEHALDPEYAKKLGVDTDQLLVSQPDTGEQ 134
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D LIRSG++D++V+DSVAALVPK E++GEMGD+H+ +QARLMSQALRK++ +L+
Sbjct: 135 ALEIADMLIRSGALDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITGALAQ 194
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+T IFINQ+R K+ F FG P E T GG ALKFYASVR++++RI +K+G++ IG++
Sbjct: 195 SKTTAIFINQLREKVGVF-FGSP-ETTSGGKALKFYASVRIDVRRIETLKEGQDAIGNRT 252
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGK 302
KIVKNK+APPFK A+F++ +G GISRE +ID+ + + K+G+ FTY+ D+ +GK
Sbjct: 253 RAKIVKNKVAPPFKQAEFDILYGHGISREGSLIDMGVDNGIIRKSGSWFTYDGDQLGQGK 312
Query: 303 EAFKQFLVENESVREELVIKLREK--LVVDHKEPQTAVTDEDSTEETVS 349
E + FL +N + EE+ +K++ K L+ ++P A E+S + VS
Sbjct: 313 ENVRNFLRDNPGLAEEIELKIKHKMGLIKVDEDPADAPAAEESDDVEVS 361
>gi|289434680|ref|YP_003464552.1| recombinase A [Listeria seeligeri serovar 1/2b str. SLCC3954]
gi|289170924|emb|CBH27466.1| RecA protein [Listeria seeligeri serovar 1/2b str. SLCC3954]
Length = 348
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 174/331 (52%), Positives = 253/331 (76%), Gaps = 4/331 (1%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
M+ + AL+QAL QI FGKGSIM LG + +++ +S+GS ALDIALG GG P+GR+
Sbjct: 1 MNDRQAALEQALKQIEKQFGKGSIMKLGEH-SDQNISTISSGSLALDIALGVGGYPRGRI 59
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+E+YGPE+SGKTT+ALH IAE Q QGG FIDAEHALDP+ A+ +GV + LLL+QPD
Sbjct: 60 IEVYGPESSGKTTVALHAIAEVQAQGGTAAFIDAEHALDPAYAKNLGVNIDELLLSQPDT 119
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + + L+RSG+VD++V+DSVAALVP+ E++GEMGDAH+ +QARLMSQALRKLS +
Sbjct: 120 GEQALEIAEALVRSGAVDMLVIDSVAALVPRAEIEGEMGDAHVGLQARLMSQALRKLSGA 179
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
++ S+TI IFINQ+R K+ FG P E+T GG ALKFY++VRL ++R +K+G + +G
Sbjct: 180 INKSKTIAIFINQIREKVGVM-FGNP-EITPGGRALKFYSTVRLEVRRAEQLKQGTDVMG 237
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF- 299
++ +K+VKNK+APPF+ A+ ++ +G+GISRE E++D+A + +K+G+ ++Y +
Sbjct: 238 NKTKIKVVKNKVAPPFRIAEVDIMYGEGISREGELVDMAAEVDVINKSGSWYSYKEERIG 297
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVD 330
+G+E KQ+L E+ +R+E+ ++RE+ +D
Sbjct: 298 QGRENAKQYLKEHTDIRDEISKRVREEYEID 328
>gi|325068442|ref|ZP_08127115.1| recA protein [Actinomyces oris K20]
Length = 413
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/318 (56%), Positives = 240/318 (75%), Gaps = 4/318 (1%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL AL QI SFGKGS+M LG P V V+ TGS ALD+ALG GGLP+GR+VE+YGP
Sbjct: 13 ALATALAQIDKSFGKGSVMRLGDESRP-PVSVIPTGSVALDVALGVGGLPRGRIVEVYGP 71
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTT+ALH +A AQR GG FIDAEHALDP A+ +GV +NLL++QPD GEQAL
Sbjct: 72 ESSGKTTVALHAVASAQRAGGNAAFIDAEHALDPVYAKALGVDIDNLLVSQPDTGEQALE 131
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ D L+RSG +D++V+DSVAALVPK E++GEMGD+H+ +QARLMSQALRK++ +LS + T
Sbjct: 132 ITDMLVRSGGLDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITGALSSTGT 191
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
IFINQ+R K+ F FG P E T GG ALKFYASVRL+++RIG +K G++ +G++ VK
Sbjct: 192 TAIFINQLREKIGVF-FGNP-ETTTGGKALKFYASVRLDVRRIGGLKDGDQPVGNRTRVK 249
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGKEAF 305
+VKNK+APPFK A+F++ +G+GISRE ++DL + + K+GA FTY D+ +GKE
Sbjct: 250 VVKNKMAPPFKQAEFDILYGQGISREGSLLDLGVDNGVVRKSGAWFTYGEDQLGQGKENA 309
Query: 306 KQFLVENESVREELVIKL 323
+ FL +N + E+ K+
Sbjct: 310 RNFLKDNPQLAAEIEEKI 327
>gi|308048572|ref|YP_003912138.1| recA protein [Ferrimonas balearica DSM 9799]
gi|307630762|gb|ADN75064.1| recA protein [Ferrimonas balearica DSM 9799]
Length = 346
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 184/317 (58%), Positives = 235/317 (74%), Gaps = 4/317 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGSIM LG + T + VSTGS LDIALG GGLP GR+VEI
Sbjct: 5 KKRALSAALGQIEKQFGKGSIMRLGDATT-LDIESVSTGSLGLDIALGIGGLPYGRIVEI 63
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIAEAQ+QG C F+DAEHALDP A +GV E LL++QPD GEQ
Sbjct: 64 YGPESSGKTTLTLQVIAEAQKQGKTCAFVDAEHALDPVYAAKLGVNVEELLVSQPDTGEQ 123
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RSG+VDVV+VDSVAAL PK E++GEMGD+H+ +QARLMSQALRKL+ ++
Sbjct: 124 ALEICDMLVRSGAVDVVIVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKR 183
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T+ +FINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK G+E +G++
Sbjct: 184 SNTLCVFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAVKDGDEVVGNET 241
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK++PPFK A+F++ +G+G S+E E+IDL ++ K K+GA ++Y +GK
Sbjct: 242 RVKVVKNKVSPPFKQAEFQILYGEGTSKEGELIDLGVQQKLIEKSGAWYSYQGEKIGQGK 301
Query: 303 EAFKQFLVENESVREEL 319
+FL EN ++ E+
Sbjct: 302 ANSIRFLKENVAIANEI 318
>gi|390571847|ref|ZP_10252081.1| recombinase A [Burkholderia terrae BS001]
gi|420249977|ref|ZP_14753209.1| protein RecA [Burkholderia sp. BT03]
gi|389936177|gb|EIM98071.1| recombinase A [Burkholderia terrae BS001]
gi|398063091|gb|EJL54847.1| protein RecA [Burkholderia sp. BT03]
Length = 358
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/335 (55%), Positives = 247/335 (73%), Gaps = 4/335 (1%)
Query: 14 QITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASGKTT 73
QI FGKGS+M LG+ + VVSTGS LDIALG GGLP+GRVVEIYGPE+SGKTT
Sbjct: 25 QIEKQFGKGSVMRLGQGEAVEDIQVVSTGSLGLDIALGVGGLPRGRVVEIYGPESSGKTT 84
Query: 74 LALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSLVDTLIR 133
L L V+AE Q+ GG FIDAEHALD A+ +GV +LL++QPD GEQAL + D L+R
Sbjct: 85 LTLQVVAEMQKLGGTAAFIDAEHALDIQYAQKLGVDVSDLLVSQPDTGEQALEIADALVR 144
Query: 134 SGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFINQ 193
SGS+D++V+DSVAALVPK E++GEMGD+ +QARLMSQALRKL+ ++ + ++IFINQ
Sbjct: 145 SGSIDMIVIDSVAALVPKAEIEGEMGDSLPGLQARLMSQALRKLTGTIKRTNCLVIFINQ 204
Query: 194 VRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVKIVKNKLA 253
+R K+ FG P E T GGNALKFYASVRL+I+RIG +KK +E IG++ VK+VKNK+A
Sbjct: 205 IRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGSIKKNDEVIGNETRVKVVKNKVA 262
Query: 254 PPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGKEAFKQFLVEN 312
PPF+ A F++ +G+GISR+ EIIDL ++ K KAGA ++Y+ +R +GK+ ++FL EN
Sbjct: 263 PPFREAIFDILYGEGISRQGEIIDLGVQAKIVDKAGAWYSYSGERIGQGKDNAREFLREN 322
Query: 313 ESVREELVIKLREKLVVDHKEPQTAVT-DEDSTEE 346
+ E+ ++RE L V+ AV+ DE+ EE
Sbjct: 323 PDIAREIENRIRESLGVNAMPAGAAVSADEEVGEE 357
>gi|262372265|ref|ZP_06065544.1| recA protein [Acinetobacter junii SH205]
gi|262312290|gb|EEY93375.1| recA protein [Acinetobacter junii SH205]
Length = 348
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/340 (53%), Positives = 245/340 (72%), Gaps = 5/340 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K ALQ AL QI FGK ++M LG + T + V VSTGS LDIALG GGLPKGR++E
Sbjct: 4 NKSKALQAALSQIEKQFGKNTVMRLGDN-TVQAVEAVSTGSLTLDIALGIGGLPKGRIIE 62
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTT+ L IA+ Q+ GG C FIDAEHALDP A +GV +NLL++QPD GE
Sbjct: 63 IYGPESSGKTTMTLQAIAQCQKNGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDNGE 122
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L+RSG++D++VVDSVAAL PK E++GEMGD+HM +QARLMSQALRK++ +
Sbjct: 123 QALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAK 182
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+G+E +GS+
Sbjct: 183 RSNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGQVKEGDEIVGSE 240
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK+VKNK+APPF+ A F++ +GKG ++ E++DLA++ KAGA ++Y +G
Sbjct: 241 TKVKVVKNKMAPPFREAVFQIMYGKGTNQLGELVDLAVQQDIVQKAGAWYSYQGNKIGQG 300
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDE 341
K ++ EN + E+ +RE+L+ + P+ A T++
Sbjct: 301 KNNVIRYFEENSKIAAEIEKVVREQLLTKNN-PEAAPTED 339
>gi|220919188|ref|YP_002494492.1| recA protein [Anaeromyxobacter dehalogenans 2CP-1]
gi|219957042|gb|ACL67426.1| recA protein [Anaeromyxobacter dehalogenans 2CP-1]
Length = 358
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 185/334 (55%), Positives = 251/334 (75%), Gaps = 5/334 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGR-SVTPRHVPVVSTGSFALDIALGTGGLPKGRVV 61
+K+ A++ A+ I +FGKGSIM LG + V VSTG+ +LDIALG GG P+GR++
Sbjct: 6 EKEKAIELAVASIEKAFGKGSIMRLGNEDALVKDVQAVSTGAVSLDIALGVGGFPRGRII 65
Query: 62 EIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCG 121
EIYGPE+SGKTTLALH IAEAQR+GG F+DAEHALD A +GV+T++LL++QPD G
Sbjct: 66 EIYGPESSGKTTLALHAIAEAQRRGGIAAFVDAEHALDVGYARKLGVRTDDLLISQPDSG 125
Query: 122 EQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSL 181
EQAL +V+TL+RSG++DV+VVDSVAALVPK EL+GEMGDAHM +QARLMSQALRKL+ ++
Sbjct: 126 EQALEIVETLVRSGAIDVLVVDSVAALVPKAELEGEMGDAHMGVQARLMSQALRKLTGTI 185
Query: 182 SLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGS 241
+ S TI+IFINQ+R K+ FG P E T GGNALKFYAS RL+I+RIG +K G+ IG+
Sbjct: 186 AKSATIVIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASQRLDIRRIGAIKDGDSVIGN 243
Query: 242 QIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFR 300
+ VK+VKNK+APPFK +F++ +G+GISRE +++DLA K+G F++ +R +
Sbjct: 244 RTRVKVVKNKVAPPFKEVEFDIMYGQGISREGDVLDLASNENIVEKSGTWFSFGGERIGQ 303
Query: 301 GKEAFKQFLVENESVREELVIKLREKLVVDHKEP 334
G+E K F E+ + +++ +L EK + H+ P
Sbjct: 304 GREQAKAFFREHPEILQQIESRLFEKFGI-HRGP 336
>gi|148887237|emb|CAM12785.1| recombinase A [Ochrobactrum sp. TK 14]
Length = 299
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 178/299 (59%), Positives = 232/299 (77%), Gaps = 3/299 (1%)
Query: 11 ALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASG 70
AL QI +FGKGSIM LG++ + VSTGS +LDIALG GGLPKGR+V+IYGPE+SG
Sbjct: 3 ALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIVKIYGPESSG 62
Query: 71 KTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSLVDT 130
KTTLALH IAEAQ++GG C F+DAEHALDP A +GV ENLL++QPD GEQAL + DT
Sbjct: 63 KTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQALEITDT 122
Query: 131 LIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIF 190
L+RSG++DV+V+DSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S S ++IF
Sbjct: 123 LVRSGAIDVLVIDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISRSNCMVIF 182
Query: 191 INQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVKIVKN 250
INQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+ +E +G+Q VK+VKN
Sbjct: 183 INQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKERDEVVGNQTRVKVVKN 240
Query: 251 KLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGKEAFKQF 308
KLAPPFK +F++ +G G+S+ E++DL +K K+GA F+YN + +G+E KQ+
Sbjct: 241 KLAPPFKQVEFDIMYGAGVSKMGELVDLGVKAGVVEKSGAWFSYNSQRLGQGRENAKQY 299
>gi|343522848|ref|ZP_08759814.1| RecA protein [Actinomyces sp. oral taxon 175 str. F0384]
gi|343402257|gb|EGV14763.1| RecA protein [Actinomyces sp. oral taxon 175 str. F0384]
Length = 413
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/318 (56%), Positives = 240/318 (75%), Gaps = 4/318 (1%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL AL QI SFGKGS+M LG P V V+ TGS ALD+ALG GGLP+GR+VE+YGP
Sbjct: 13 ALATALAQIDKSFGKGSVMRLGDESRP-PVSVIPTGSVALDVALGVGGLPRGRIVEVYGP 71
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTT+ALH +A AQR GG FIDAEHALDP A+ +GV +NLL++QPD GEQAL
Sbjct: 72 ESSGKTTVALHAVASAQRAGGNAAFIDAEHALDPVYAKALGVDIDNLLVSQPDTGEQALE 131
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ D L+RSG +D++V+DSVAALVPK E++GEMGD+H+ +QARLMSQALRK++ +LS + T
Sbjct: 132 ITDMLVRSGGLDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITGALSSTGT 191
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
IFINQ+R K+ F FG P E T GG ALKFYASVRL+++RIG +K G++ +G++ VK
Sbjct: 192 TAIFINQLREKIGVF-FGNP-ETTTGGKALKFYASVRLDVRRIGGLKDGDQPVGNRTRVK 249
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGKEAF 305
+VKNK+APPFK A+F++ +G+GISRE ++DL + + K+GA FTY D+ +GKE
Sbjct: 250 VVKNKMAPPFKQAEFDILYGQGISREGSLLDLGVDNGVVRKSGAWFTYGEDQLGQGKENA 309
Query: 306 KQFLVENESVREELVIKL 323
+ FL +N + E+ K+
Sbjct: 310 RNFLKDNPQLAAEIEEKI 327
>gi|229916160|ref|YP_002884806.1| recA protein [Exiguobacterium sp. AT1b]
gi|259563336|sp|C4L2V3.1|RECA_EXISA RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|229467589|gb|ACQ69361.1| recA protein [Exiguobacterium sp. AT1b]
Length = 349
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 179/343 (52%), Positives = 255/343 (74%), Gaps = 4/343 (1%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
MS + AL+ AL QI FGKGSIM LG + T + V V+ +GS ALD+ALG GG P+GRV
Sbjct: 1 MSDRKQALEMALRQIEKQFGKGSIMRLGEN-TDQQVSVIPSGSIALDVALGAGGYPRGRV 59
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+E+YGPE+SGKTT+ALH IAE Q++GG F+DAEHALDP A+ +GV + LLL+QPD
Sbjct: 60 IEVYGPESSGKTTVALHAIAEVQKRGGQAAFVDAEHALDPKYAKNLGVNIDELLLSQPDT 119
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + + L+RSG+VD++VVDSVAALVPK E++GEMGD+H+ +QARLMSQALRKLS +
Sbjct: 120 GEQALEIAEALVRSGAVDILVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLSGA 179
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
+ S+TI+IFINQ+R K+ FG P E T GG ALKFY+SVRL ++R +K+G++ +G
Sbjct: 180 TNKSKTIVIFINQIREKIGIM-FGNP-ETTPGGRALKFYSSVRLEVRRAETLKQGQDMVG 237
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF- 299
++ +KIVKNK+APPFKTA+ ++ +G+GISRE E+ID+ K+GA +++N+
Sbjct: 238 NRTKIKIVKNKIAPPFKTAEVDIMYGEGISREGELIDIGADLDIVQKSGAWYSFNEERLG 297
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDED 342
+G+E KQ++ EN ++ E+ ++R+ ++ ++ T ++D
Sbjct: 298 QGRENAKQYMKENPAIAAEVEQQIRDHYGLNGEKTVTVEGEDD 340
>gi|67459613|ref|YP_247237.1| recombinase A [Rickettsia felis URRWXCal2]
gi|75535990|sp|Q4UK63.1|RECA_RICFE RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|67005146|gb|AAY62072.1| RecA protein [Rickettsia felis URRWXCal2]
Length = 343
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 189/327 (57%), Positives = 249/327 (76%), Gaps = 6/327 (1%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPR-HVPVVSTGSFALDIALGTGGLPKGRV 60
+ K+ A+ AL QI S+GKGS+M LG+ P + VSTGS LDIALG GG+PKGR+
Sbjct: 4 TDKERAIAAALAQIEKSYGKGSVMKLGQR--PNIDIEAVSTGSLGLDIALGIGGVPKGRI 61
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+EI+GPE+SGKTTL LH+IAEAQ++GG C FIDAEHALDP+ A+ +GV + L+++QPD
Sbjct: 62 IEIFGPESSGKTTLTLHLIAEAQKKGGTCAFIDAEHALDPAYAKKLGVNIDELIISQPDT 121
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + DTLIRSG +D++++DSVAALVPK E++GEMGDA MA QARLMSQALRKL+ S
Sbjct: 122 GEQALEIADTLIRSGGIDMIIIDSVAALVPKSEIEGEMGDAQMASQARLMSQALRKLTAS 181
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
++ + I +FINQ+R K+ FG P E T GGNALKFYASVR++I+RIG +K EE IG
Sbjct: 182 INRTNCITVFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRIDIRRIGSIKDKEEVIG 239
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYND-RNF 299
SQ VK+VKNK++PPFKTA F++ +G GIS+E EIIDL +K K+G+ F+YN+ R
Sbjct: 240 SQTKVKVVKNKVSPPFKTADFDIMYGSGISKEGEIIDLGVKLDIVEKSGSWFSYNNVRIG 299
Query: 300 RGKEAFKQFLVENESVREELVIKLREK 326
+G+E KQ+L E+ + E+ +REK
Sbjct: 300 QGRENVKQYLKEHPQISNEIEKIIREK 326
>gi|229000603|ref|ZP_04160143.1| hypothetical protein bmyco0003_51360 [Bacillus mycoides Rock3-17]
gi|229006025|ref|ZP_04163714.1| hypothetical protein bmyco0002_29460 [Bacillus mycoides Rock1-4]
gi|228755224|gb|EEM04580.1| hypothetical protein bmyco0002_29460 [Bacillus mycoides Rock1-4]
gi|228759158|gb|EEM08164.1| hypothetical protein bmyco0003_51360 [Bacillus mycoides Rock3-17]
Length = 341
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 176/326 (53%), Positives = 242/326 (74%), Gaps = 4/326 (1%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
MS + AL AL QI FGKGSIM LG R + + +GS ALD+ALG GG P+GRV
Sbjct: 1 MSDRQAALDMALKQIEKQFGKGSIMKLGEQAE-RRISTIPSGSLALDVALGVGGYPRGRV 59
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+EIYGPE+SGKTT++LH IAE QRQGG FIDAEHA+DP A+ +GV + LLL+QPD
Sbjct: 60 IEIYGPESSGKTTVSLHAIAEVQRQGGQAAFIDAEHAMDPVYAQKLGVNIDELLLSQPDT 119
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQ L + + L+RSG++D++V+DSVAALVPK E++GEMGD+H+ +QARLMSQALRKLS +
Sbjct: 120 GEQGLEIAEALVRSGAIDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLSGA 179
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
++ S+TI IFINQ+R K+ FG P E T GG ALKFY++VRL ++R +K+G + +G
Sbjct: 180 INKSKTIAIFINQIREKVGVM-FGNP-ETTPGGRALKFYSTVRLEVRRAEQLKQGNDIVG 237
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF- 299
++ +K+VKNK+APPF+ A+ ++ +G+GISRE EI+D+A + K+GA ++YN+
Sbjct: 238 NKTKIKVVKNKVAPPFRVAEVDIMYGEGISREGEILDMASELDIVQKSGAWYSYNEERLG 297
Query: 300 RGKEAFKQFLVENESVREELVIKLRE 325
+G+E KQFL EN +R+E+ +RE
Sbjct: 298 QGRENAKQFLKENPELRDEIAFFIRE 323
>gi|229817437|ref|ZP_04447719.1| hypothetical protein BIFANG_02699 [Bifidobacterium angulatum DSM
20098 = JCM 7096]
gi|229785226|gb|EEP21340.1| hypothetical protein BIFANG_02699 [Bifidobacterium angulatum DSM
20098 = JCM 7096]
Length = 395
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/345 (53%), Positives = 258/345 (74%), Gaps = 8/345 (2%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
++ AL AL Q+ SFGKGS M LG ++V V+ TGS ALD+ALG GGLPKGR+VE
Sbjct: 17 RRKAALDTALAQVEKSFGKGSAMRLGDR-PEQNVEVIPTGSLALDMALGIGGLPKGRIVE 75
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
+YGPE+SGKTTLALHV+A AQ+ GG FIDAEHALDP A +GV T++L+++QPD GE
Sbjct: 76 VYGPESSGKTTLALHVVANAQKAGGVAAFIDAEHALDPVYARKLGVDTDSLIVSQPDNGE 135
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D LIRSG++DV+V+DSVAALVPK E++G+MGD+H+ +QARLMSQALRK++ +L+
Sbjct: 136 QALEIADMLIRSGALDVIVIDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKMTGALA 195
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ T IFINQ+R K+ F FG P E T GG ALKFY+SVRL+I+RI +K G+E +G++
Sbjct: 196 QAGTTAIFINQLREKIGVF-FGSP-ETTTGGKALKFYSSVRLDIRRIQTIKNGDEAVGNR 253
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRG 301
VK+VKNK+APPFK+A+F++ +G+GISRE +D+A++ K+G+ FTY D+ +G
Sbjct: 254 TRVKVVKNKMAPPFKSAEFDMLYGEGISREGSALDMAIQVGVVKKSGSWFTYEGDQLGQG 313
Query: 302 KEAFKQFLVENESVREELVIKLREKL-VVDHKEPQTAVTDEDSTE 345
+E + FL +N ++ EE+ K++ + ++D P ++D+T+
Sbjct: 314 RENVRNFLKDNPAITEEIENKVKVEFGLID---PMDQFAEDDATK 355
>gi|379709914|ref|YP_005265119.1| DNA strand exchange and recombination protein [Nocardia
cyriacigeorgica GUH-2]
gi|374847413|emb|CCF64483.1| DNA strand exchange and recombination protein with protease and
nuclease activity [Nocardia cyriacigeorgica GUH-2]
Length = 345
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 178/325 (54%), Positives = 247/325 (76%), Gaps = 4/325 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
+D AL+ AL Q+ SFGKG++M LG + V V+ TGS ALD+ALG GGLP+GRVVEI
Sbjct: 8 RDKALELALAQVEKSFGKGAVMRLGEEAR-QPVSVIPTGSIALDVALGIGGLPRGRVVEI 66
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ALH +A AQ GG FIDAEHALDP A +GV T+ LL++QPD GEQ
Sbjct: 67 YGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYARKLGVDTDALLVSQPDTGEQ 126
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RSG++D++V+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ +L+
Sbjct: 127 ALEIADMLVRSGAIDIIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTSALNN 186
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T IFINQ+R K+ FG P E T GG ALKFYASVRL+++RI +K G + +G++
Sbjct: 187 SGTTAIFINQLREKIGVM-FGSP-ETTTGGKALKFYASVRLDVRRIETLKDGSDAVGNRT 244
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRGK 302
VK+VKNK++PPFK A+F++ +G GIS+E +ID+ ++ F K+G+ +TY D+ +GK
Sbjct: 245 RVKVVKNKVSPPFKQAEFDILYGHGISKEGSLIDMGVEQGFIRKSGSWYTYEGDQLGQGK 304
Query: 303 EAFKQFLVENESVREELVIKLREKL 327
E ++FL++N +R+E+ K++EKL
Sbjct: 305 ENARKFLLDNTDIRDEIEKKIKEKL 329
>gi|416157769|ref|ZP_11605292.1| recombinase A [Moraxella catarrhalis 101P30B1]
gi|416224493|ref|ZP_11626556.1| recombinase A [Moraxella catarrhalis 103P14B1]
gi|416235610|ref|ZP_11630241.1| recombinase A [Moraxella catarrhalis 12P80B1]
gi|416253822|ref|ZP_11638423.1| recombinase A [Moraxella catarrhalis O35E]
gi|326562574|gb|EGE12887.1| recombinase A [Moraxella catarrhalis 103P14B1]
gi|326564101|gb|EGE14341.1| recombinase A [Moraxella catarrhalis 12P80B1]
gi|326573518|gb|EGE23481.1| recombinase A [Moraxella catarrhalis 101P30B1]
gi|326577768|gb|EGE27641.1| recombinase A [Moraxella catarrhalis O35E]
Length = 349
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/346 (54%), Positives = 247/346 (71%), Gaps = 9/346 (2%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K+ AL+ AL QI FGK +IM LG V VVSTGS LDIALG GGLPKGR++E
Sbjct: 4 NKEKALKAALAQIEKQFGKNTIMHLGDETAKLDVDVVSTGSLGLDIALGIGGLPKGRIIE 63
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
I+GPE+SGKTTL L IAE Q+QGG C FIDAEHALDP A+ +GV ++LL++QPD GE
Sbjct: 64 IFGPESSGKTTLTLQTIAECQKQGGTCAFIDAEHALDPIYAKKLGVNIDDLLVSQPDNGE 123
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L+RSG++D++VVDSVAAL PK E++GEMGD+HM +QARLMSQALRK++ +
Sbjct: 124 QALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAK 183
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK G+E IGS+
Sbjct: 184 RSNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSVKDGDEIIGSE 241
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK++KNK+APPF+ +F++ +G+GI+R E+IDL + K+GA ++Y D +G
Sbjct: 242 TRVKVIKNKMAPPFRQTEFQIMYGEGINRLGEVIDLGVDIGAVGKSGAWYSYGDGKIGQG 301
Query: 302 KEAFKQFLVENESVREELVIKLRE-KLVVDHKEPQTAVTDEDSTEE 346
K ++L EN ++ E+ K+RE KL T + + D +EE
Sbjct: 302 KANTVKYLQENPAIASEIEAKVREIKLAT-----VTPIVESDESEE 342
>gi|84686865|ref|ZP_01014749.1| recombinase A [Maritimibacter alkaliphilus HTCC2654]
gi|84665062|gb|EAQ11542.1| recombinase A [Rhodobacterales bacterium HTCC2654]
Length = 361
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/346 (54%), Positives = 246/346 (71%), Gaps = 3/346 (0%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVV 61
S+K AL AL QI FGKGSIM LG + STGS LDIALG GGLPKGR++
Sbjct: 18 SEKQKALDSALAQIERQFGKGSIMKLGADNPVAEIASTSTGSLGLDIALGIGGLPKGRII 77
Query: 62 EIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCG 121
EIYGPE+SGKTTL LH +AE Q++GG C F+DAEHALDP A+ +GV + LL++QPD G
Sbjct: 78 EIYGPESSGKTTLTLHCVAEEQKKGGVCAFVDAEHALDPQYAKRLGVDLDELLISQPDTG 137
Query: 122 EQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSL 181
EQAL +VDTL+RSG+V++VVVDSVAAL PK EL+G+MGD+ + +QARLMSQA+RKL+ S+
Sbjct: 138 EQALEIVDTLVRSGAVNMVVVDSVAALTPKSELEGDMGDSSVGVQARLMSQAMRKLTGSI 197
Query: 182 SLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGS 241
+ S ++IFINQ+R K+ FG P E T GGNALKFY+SVRL+I+RIG +K +E +G+
Sbjct: 198 ARSNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYSSVRLDIRRIGAIKDRDEVVGN 255
Query: 242 QIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYND-RNFR 300
VK+VKNK+APPFK +F++ +G+GIS+ E++DL +K K+GA F+Y D R +
Sbjct: 256 ATRVKVVKNKVAPPFKQVEFDIMYGEGISKTGELLDLGVKAGVVEKSGAWFSYGDERIGQ 315
Query: 301 GKEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEE 346
G+E K FL EN S+ E+ K+R +D D D E+
Sbjct: 316 GRENSKTFLKENPSIALEIEDKIRAAHGLDFDMGGADFDDADVVED 361
>gi|408785530|ref|ZP_11197275.1| recombinase A [Rhizobium lupini HPC(L)]
gi|408488678|gb|EKJ96987.1| recombinase A [Rhizobium lupini HPC(L)]
Length = 300
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 179/294 (60%), Positives = 229/294 (77%), Gaps = 2/294 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI SFGKGSIM LG + V VSTGS +LDIALG GGLPKGR++EI
Sbjct: 3 KSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGRIIEI 62
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL IAEAQ++GG C F+DAEHALDP A +GV ++LL++QPD GEQ
Sbjct: 63 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQSLLISQPDTGEQ 122
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 123 ALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 182
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+ ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+ EE +G+Q
Sbjct: 183 SKCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAVKEREEVVGNQT 240
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDR 297
VK+VKNK+APPFK +F++ +G+G+S+ E++DL +K K+GA F+YN +
Sbjct: 241 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQ 294
>gi|374986096|ref|YP_004961591.1| recombinase A [Streptomyces bingchenggensis BCW-1]
gi|297156748|gb|ADI06460.1| recombinase A [Streptomyces bingchenggensis BCW-1]
Length = 378
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/339 (53%), Positives = 253/339 (74%), Gaps = 6/339 (1%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLG-RSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
+ ++ AL AL QI FGKG++M +G R P + V+ TGS ALD+ALG GGLP+GRV
Sbjct: 4 TDREKALDAALAQIERQFGKGAVMRMGERPNEP--IEVIPTGSTALDVALGVGGLPRGRV 61
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
VE++GPE+SGKTTL LH +A AQR GG F+DAEHALDP A+ +GV T++L+L+QPD
Sbjct: 62 VEVFGPESSGKTTLTLHAVANAQRAGGAVAFVDAEHALDPDYAQKLGVDTDSLILSQPDN 121
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + D L+RSG++D++V+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ +
Sbjct: 122 GEQALEITDMLVRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITSA 181
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
L+ S+T IFINQ+R K+ FG P E T GG ALKFYASVRL+I+RI +K G E +G
Sbjct: 182 LNQSKTTAIFINQLREKIGVM-FGSP-ETTTGGRALKFYASVRLDIRRIETLKDGTEAVG 239
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNF 299
++ VK+VKNK+APPFK A+F++ +G+GISRE +ID+ ++H F K+GA +TY D+
Sbjct: 240 NRTRVKVVKNKVAPPFKQAEFDILYGQGISREGGLIDMGVEHGFVRKSGAWYTYEGDQLG 299
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAV 338
+GKE + FL +N + E+ K++EKL + K + AV
Sbjct: 300 QGKENARNFLKDNPDLANEIERKIKEKLGIGVKREEPAV 338
>gi|205373469|ref|ZP_03226272.1| recombination protein A [Bacillus coahuilensis m4-4]
Length = 345
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 179/325 (55%), Positives = 241/325 (74%), Gaps = 4/325 (1%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL AL QI FGKGSIM LG R + +S+GS LD ALG GG P+GR+VEIYGP
Sbjct: 8 ALDMALKQIEKQFGKGSIMKLGEQ-QDRKISTISSGSVTLDTALGVGGYPRGRIVEIYGP 66
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTT+ALH IAE Q QGG FIDAEHALDP A+ +GV + LLL+QPD GEQAL
Sbjct: 67 ESSGKTTVALHAIAEVQAQGGQAAFIDAEHALDPVYAQKLGVNIDELLLSQPDTGEQALE 126
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ + L+RSG+VD++V+DSVAALVPK E++GEMGD+H+ +QARLMSQALRKLS +++ S+T
Sbjct: 127 IAEALVRSGAVDILVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLSGAINKSKT 186
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
I IFINQ+R K+ FG P E T GG ALKFY+SVRL ++R +K+G + +G++ +K
Sbjct: 187 IAIFINQIREKVGVM-FGNP-ETTPGGRALKFYSSVRLEVRRAETLKQGNDMVGNKTKIK 244
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGKEAF 305
+VKNK+APPF+ A+ ++ +G+GIS+E EIIDL K+G+ ++YN+ +G+E
Sbjct: 245 VVKNKVAPPFRVAEVDIMYGEGISKEGEIIDLGSDLDIVQKSGSWYSYNEERLGQGRENA 304
Query: 306 KQFLVENESVREELVIKLREKLVVD 330
KQFL EN +R+E+++K+RE +D
Sbjct: 305 KQFLKENPDIRQEILLKIREHYGLD 329
>gi|389711178|ref|ZP_10186989.1| recombinase A [Acinetobacter sp. HA]
gi|388610030|gb|EIM39167.1| recombinase A [Acinetobacter sp. HA]
Length = 347
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 184/341 (53%), Positives = 248/341 (72%), Gaps = 12/341 (3%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K+ AL AL QI FGK ++M LG + T + V VSTGS LDIALG GGLPKGR++E
Sbjct: 4 NKNKALNAALSQIEKQFGKNTVMRLGDN-TVQAVEAVSTGSLTLDIALGIGGLPKGRIIE 62
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTT+ L IAE Q+ GG C FIDAEHALDP A +GV +NLL++QPD GE
Sbjct: 63 IYGPESSGKTTMTLQAIAECQKAGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDHGE 122
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L+RSG++D++VVDSVAAL P+ E++GEMGD+HM +QARLMSQALRK++ +
Sbjct: 123 QALEIADMLVRSGAIDLIVVDSVAALTPRAEIEGEMGDSHMGLQARLMSQALRKITGNAK 182
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+G+E +GS+
Sbjct: 183 RSNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGQVKEGDEIVGSE 240
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+APPFK A F++ +GKG++ E+IDLA++ + KAGA ++Y D+ +G
Sbjct: 241 TKVKVVKNKMAPPFKEALFQILYGKGVNHLGELIDLAVQQEIVQKAGAWYSYQGDKIGQG 300
Query: 302 KEAFKQFLVENESVREELVIKLREKLVV--------DHKEP 334
K ++L EN+++ + + +RE+L+ D +EP
Sbjct: 301 KNNTIRYLEENKALADTIEKLIREQLLTTGNVVEDKDEEEP 341
>gi|329947478|ref|ZP_08294680.1| RecA protein [Actinomyces sp. oral taxon 170 str. F0386]
gi|328524757|gb|EGF51812.1| RecA protein [Actinomyces sp. oral taxon 170 str. F0386]
Length = 413
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 180/318 (56%), Positives = 240/318 (75%), Gaps = 4/318 (1%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL AL QI SFGKGS+M LG P V V+ TGS ALD+ALG GGLP+GR++E+YGP
Sbjct: 13 ALATALAQIDKSFGKGSVMRLGDDTRP-PVSVIPTGSVALDVALGVGGLPRGRIIEVYGP 71
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTT+ALH +A AQR GG FIDAEHALDP A+ +GV +NLL++QPD GEQAL
Sbjct: 72 ESSGKTTVALHAVASAQRAGGNAAFIDAEHALDPVYAKALGVDIDNLLVSQPDTGEQALE 131
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ D L+RSG +D++V+DSVAALVPK E++GEMGD+H+ +QARLMSQALRK++ +LS + T
Sbjct: 132 ITDMLVRSGGLDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITGALSSTGT 191
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
IFINQ+R K+ F FG P E T GG ALKFYASVRL+++RIG +K G++ +G++ VK
Sbjct: 192 TAIFINQLREKIGVF-FGNP-ETTTGGKALKFYASVRLDVRRIGGLKDGDQPVGNRTRVK 249
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGKEAF 305
+VKNK+APPFK A+F++ +G+GISRE ++DL + + K+GA FTY D+ +GKE
Sbjct: 250 VVKNKMAPPFKQAEFDILYGQGISREGSLLDLGVDNGVVRKSGAWFTYGEDQLGQGKENA 309
Query: 306 KQFLVENESVREELVIKL 323
+ FL +N + E+ K+
Sbjct: 310 RNFLKDNPQLAAEIEEKI 327
>gi|126735783|ref|ZP_01751528.1| recA protein [Roseobacter sp. CCS2]
gi|126714970|gb|EBA11836.1| recA protein [Roseobacter sp. CCS2]
Length = 360
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/342 (54%), Positives = 247/342 (72%), Gaps = 3/342 (0%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVV 61
+ K+ AL+ AL QI FGKGSIM LG + STGS LDIALG GGLPKGRV+
Sbjct: 15 ADKEKALESALAQIERQFGKGSIMKLGGENKMPEIEATSTGSLGLDIALGIGGLPKGRVI 74
Query: 62 EIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCG 121
EIYGPE+SGKTTL LH IAE Q++GG C F+DAEHALDP A+ +GV + LL++QPD G
Sbjct: 75 EIYGPESSGKTTLTLHAIAEEQKKGGVCAFVDAEHALDPQYAKKLGVNLDELLISQPDTG 134
Query: 122 EQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSL 181
EQAL +VDTL+RSG+V++V+VDSVAAL PK EL+G+MGD+ + + ARLMSQA+RKL+ S+
Sbjct: 135 EQALEIVDTLVRSGAVNMVIVDSVAALTPKSELEGDMGDSSVGVHARLMSQAMRKLTGSI 194
Query: 182 SLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGS 241
+ S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K +E +G+
Sbjct: 195 NRSGCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAIKDRDEVVGN 252
Query: 242 QIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYND-RNFR 300
VK+VKNK+APPFK +F++ +G+GIS+ E++DL +K K+GA F+Y D R +
Sbjct: 253 ATRVKVVKNKVAPPFKQVEFDIMYGEGISKMGELLDLGVKAGVVEKSGAWFSYGDERIGQ 312
Query: 301 GKEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDED 342
G+E K FL EN+S+ E+ K+R +D P+ D D
Sbjct: 313 GRENSKIFLRENQSIALEIEDKIRAAHGLDFDLPEGNHDDGD 354
>gi|228992467|ref|ZP_04152395.1| hypothetical protein bpmyx0001_32080 [Bacillus pseudomycoides DSM
12442]
gi|228767288|gb|EEM15923.1| hypothetical protein bpmyx0001_32080 [Bacillus pseudomycoides DSM
12442]
Length = 341
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 176/326 (53%), Positives = 242/326 (74%), Gaps = 4/326 (1%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
MS + AL AL QI FGKGSIM LG R + + +GS ALD+ALG GG P+GRV
Sbjct: 1 MSDRQAALDMALKQIEKQFGKGSIMKLGEQAE-RRISTIPSGSLALDVALGVGGYPRGRV 59
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+EIYGPE+SGKTT++LH IAE QRQGG FIDAEHA+DP A+ +GV + LLL+QPD
Sbjct: 60 IEIYGPESSGKTTVSLHAIAEVQRQGGQAAFIDAEHAMDPVYAQKLGVNIDELLLSQPDT 119
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQ L + + L+RSG++D++V+DSVAALVPK E++GEMGD+H+ +QARLMSQALRKLS +
Sbjct: 120 GEQGLEIAEALVRSGAIDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLSGA 179
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
++ S+TI IFINQ+R K+ FG P E T GG ALKFY++VRL ++R +K+G + +G
Sbjct: 180 INKSKTIAIFINQIREKVGVM-FGNP-ETTPGGRALKFYSTVRLEVRRAEQLKQGNDIVG 237
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF- 299
++ +K+VKNK+APPF+ A+ ++ +G+GISRE EI+D+A + K+GA ++YN+
Sbjct: 238 NKTKIKVVKNKVAPPFRVAEVDIMYGEGISREGEILDMASELDIVQKSGAWYSYNEERLG 297
Query: 300 RGKEAFKQFLVENESVREELVIKLRE 325
+G+E KQFL EN +R+E+ +RE
Sbjct: 298 QGRENAKQFLKENPELRDEIAFFIRE 323
>gi|158320574|ref|YP_001513081.1| recA protein [Alkaliphilus oremlandii OhILAs]
gi|158140773|gb|ABW19085.1| recA protein [Alkaliphilus oremlandii OhILAs]
Length = 352
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 190/359 (52%), Positives = 258/359 (71%), Gaps = 11/359 (3%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
M KK AL AL QI FGKGSIM LG ++ VSTGS LD+ALG GG+PKGR+
Sbjct: 1 MEKKK-ALDMALSQIEKQFGKGSIMKLGEDAK-LNLESVSTGSIGLDVALGIGGIPKGRI 58
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+EIYGPE+SGKTT++LHVIAE Q++GG FIDAEHALDPS A+ +GV ENL+++QPD
Sbjct: 59 IEIYGPESSGKTTVSLHVIAETQKRGGIAAFIDAEHALDPSYAKNLGVDIENLIVSQPDT 118
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + + L+RSG+VD++VVDSVAALVPK E++GEMGD+HM +QARLMSQALRKL+ S
Sbjct: 119 GEQALEIAEALVRSGAVDIIVVDSVAALVPKAEIEGEMGDSHMGLQARLMSQALRKLAGS 178
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
+S S TI IFINQ+R K+ FG P E T GG ALKFYASVRL+++++ +K+G + +G
Sbjct: 179 ISKSNTIAIFINQLREKIGVM-FGTP-ETTTGGRALKFYASVRLDVRKVDSIKQGNDVVG 236
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF- 299
++ VK+VKNK+A PFK A+F++ +G+GIS+ +I+D+A +K+GA ++Y +
Sbjct: 237 NRTRVKVVKNKVAAPFKQAEFDIMYGEGISKAGDILDVAASLDIVTKSGAWYSYGEHRLG 296
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETVSTISPDSTDE 358
+G+E KQFL EN + E+ K+RE + P + T+ D + PD+T+E
Sbjct: 297 QGRENGKQFLKENPEISLEIENKIREY----YNLPIQSGTNTDLIQAKNDV--PDATEE 349
>gi|410942845|ref|ZP_11374586.1| recombinase A [Gluconobacter frateurii NBRC 101659]
Length = 344
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 180/323 (55%), Positives = 247/323 (76%), Gaps = 6/323 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPR-HVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL+ AL QI +FGKGSIM +G+ P+ V+STGS LDIALG GG+P+GR+VE
Sbjct: 3 KTKALEGALSQIERAFGKGSIMRMGQR--PKEQADVISTGSLGLDIALGIGGMPRGRIVE 60
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTLALHV+AEAQ++GG FIDAEHALDP A +GV + LLL+QPD GE
Sbjct: 61 IYGPESSGKTTLALHVLAEAQKKGGTVAFIDAEHALDPGYARKLGVNIDELLLSQPDAGE 120
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + DTL+RSG+VDV+VVDSVAALVP+ EL+G+MGD+H+ + ARLMSQALRKL+ +++
Sbjct: 121 QALEICDTLVRSGAVDVLVVDSVAALVPRAELEGDMGDSHVGLHARLMSQALRKLTGTVA 180
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T++IF+NQ+R K+ FG P E T GGNALKFY+S+RL+I+RIG +K +E +G+Q
Sbjct: 181 RSNTLVIFLNQIRMKIGVM-FGNP-ETTTGGNALKFYSSIRLDIRRIGSIKDKDEVVGNQ 238
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK+VKNK+APPF+ +F++ +G+GIS+ E++DL +K K+GA F+++ + +G
Sbjct: 239 TRVKVVKNKMAPPFRQVEFDIMYGEGISKMGELLDLGVKANIVEKSGAWFSFDSQRIGQG 298
Query: 302 KEAFKQFLVENESVREELVIKLR 324
+E KQFL E+ + E+ ++R
Sbjct: 299 RENAKQFLREHPEMSGEIERRIR 321
>gi|419955573|ref|ZP_14471699.1| recombinase A [Pseudomonas stutzeri TS44]
gi|387967614|gb|EIK51913.1| recombinase A [Pseudomonas stutzeri TS44]
Length = 352
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 180/328 (54%), Positives = 240/328 (73%), Gaps = 4/328 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKG++M +G + +P +STGS LDIALG GGLPKGR+VE
Sbjct: 4 NKKRALAAALGQIEKQFGKGAVMRMGDH-DRQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIAEAQ+ G C F+DAEHALDP A +GV ++LL++QPD GE
Sbjct: 63 IYGPESSGKTTLTLSVIAEAQKMGATCAFVDAEHALDPDYAGKLGVNVDDLLVSQPDTGE 122
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L+RS +VDV++VDSVAALVPK E++GEMGDAH+ +QARLMSQALRK++ ++
Sbjct: 123 QALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDAHVGLQARLMSQALRKITGNIK 182
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+R G VK+G+E +GS+
Sbjct: 183 NANCLVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSE 240
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK+VKNK+APPF+ A+F++ +GKGI R EIIDL ++ K+GA + Y +G
Sbjct: 241 TRVKVVKNKVAPPFRQAEFQILYGKGIYRNGEIIDLGVQQGLVEKSGAWYAYKGNKIGQG 300
Query: 302 KEAFKQFLVENESVREELVIKLREKLVV 329
K ++L +N + E+ ++R+KL+V
Sbjct: 301 KANASKYLEDNPEIGREIEQQIRDKLLV 328
>gi|357007970|ref|ZP_09072969.1| recombinase A [Paenibacillus elgii B69]
Length = 350
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/327 (55%), Positives = 243/327 (74%), Gaps = 4/327 (1%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
MS + AL+ AL QI FGKGSIM LG S T V + +GS ALDIALG GG P+GR+
Sbjct: 1 MSDRRAALENALRQIEKQFGKGSIMKLGES-THMQVETIPSGSLALDIALGIGGFPRGRI 59
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+E+YGPE+SGKTT+ALH IAE QR GG FIDAEHALDP A +G+ + LLL+QPD
Sbjct: 60 IEVYGPESSGKTTVALHAIAEVQRAGGTAAFIDAEHALDPLYASKLGINIDELLLSQPDT 119
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + + L+RSG+VD++V+DSVAALVPK E++GEMGD+H+ +QARLMSQALRKLS +
Sbjct: 120 GEQALEIAEALVRSGAVDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLSGA 179
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
++ S+TI IFINQ+R K+ FG P E T GG ALKFY+SVRL+++R+ +K+G + +G
Sbjct: 180 INKSKTIAIFINQLREKVGVM-FGNP-ETTPGGRALKFYSSVRLDVRRVETIKQGNDMVG 237
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNF 299
++ +K+VKNK+APPFK A ++ +G+GISRE I+D+A + K+GA ++Y NDR
Sbjct: 238 NRTRIKVVKNKVAPPFKQADIDIMYGEGISREGSIVDIATEMDVIQKSGAWYSYNNDRLG 297
Query: 300 RGKEAFKQFLVENESVREELVIKLREK 326
+G+E KQFL EN + + + K+RE
Sbjct: 298 QGRENAKQFLKENPHIADVIEKKIREN 324
>gi|157148233|ref|YP_001455552.1| recombinase A [Citrobacter koseri ATCC BAA-895]
gi|166220638|sp|A8ANQ3.1|RECA_CITK8 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|157085438|gb|ABV15116.1| hypothetical protein CKO_04050 [Citrobacter koseri ATCC BAA-895]
Length = 354
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/340 (56%), Positives = 242/340 (71%), Gaps = 5/340 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYARKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV+VVDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+GE +GS+
Sbjct: 185 QSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKEGENVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +K K KAGA ++YN +G
Sbjct: 243 TRVKVVKNKIAAPFKQAEFQILYGEGINFYGELVDLGVKEKLIEKAGAWYSYNGEKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKE-PQTAVTD 340
K +L EN + +E+ K+RE L+ + P +V D
Sbjct: 303 KANATAWLKENPATAKEIEKKVRELLLSNQDSTPDFSVDD 342
>gi|15488442|gb|AAL01117.1|AF410431_1 RecA [Leptospira biflexa serovar Patoc]
Length = 387
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/352 (51%), Positives = 250/352 (71%), Gaps = 11/352 (3%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
A+ AL QI FGKGSIM LG + VVSTGS LDIALG GG P GR++EIYGP
Sbjct: 20 AIDAALGQIEKQFGKGSIMRLGADTRMSEMNVVSTGSLDLDIALGIGGFPSGRIIEIYGP 79
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTTL L IAE Q++GG FIDAEHALDPS A+ +GV ++LL+AQPD GE+AL
Sbjct: 80 ESSGKTTLTLSAIAETQKKGGIAAFIDAEHALDPSYAKKLGVNVDDLLVAQPDNGEEALE 139
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ ++L+RS ++D++V+DSVAALVPK E++G+MGD+HM +QARLMSQALRKL+ ++S S T
Sbjct: 140 ICESLVRSNAIDLIVIDSVAALVPKAEIEGDMGDSHMGLQARLMSQALRKLTGTISKSST 199
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
+IFINQ+R K+ FG P E T GGNALKFYAS+RL+I+RI +K+ EE +G+++ VK
Sbjct: 200 TVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASIRLDIRRIETLKEKEEPVGNRVRVK 257
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGKEAF 305
+VKNK APPF+ A+F++ + GI+RES +IDLA++H +KAG+ ++YN +GKE
Sbjct: 258 VVKNKCAPPFRQAEFDIMYANGINRESSLIDLAVRHDLVAKAGSWYSYNGEKIGQGKEQV 317
Query: 306 KQFLVEN--------ESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETVS 349
+ F +EN VR + L ++ + +E ++ D T+ET S
Sbjct: 318 RNFFLENPDIAFKIENQVRNLNALPLLDQAKIQTREVKSIERDTKETKETKS 369
>gi|451812066|ref|YP_007448520.1| recombination protein RecA [Candidatus Kinetoplastibacterium
galatii TCC219]
gi|451777968|gb|AGF48916.1| recombination protein RecA [Candidatus Kinetoplastibacterium
galatii TCC219]
Length = 354
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 184/349 (52%), Positives = 252/349 (72%), Gaps = 6/349 (1%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVV 61
S K+ AL AL QI FGKGS+M G + + VVSTGS LDIALG GGLP+GRV+
Sbjct: 11 SDKEKALSAALSQIEKQFGKGSVMRYGDNDIQNDIQVVSTGSLGLDIALGVGGLPRGRVI 70
Query: 62 EIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCG 121
EIYGPE+SGKTTL L +I+E Q+ GG C FIDAEHALD A +G+ +LL++QPD G
Sbjct: 71 EIYGPESSGKTTLTLQIISEMQKIGGTCAFIDAEHALDVQYASKLGIILPDLLISQPDTG 130
Query: 122 EQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSL 181
EQAL + D L+RSGSVD++V+DSVAALVPK E++G+MGD+ +QARLMSQALRKL+ ++
Sbjct: 131 EQALEIADALVRSGSVDLIVIDSVAALVPKAEIEGDMGDSLPGLQARLMSQALRKLTATI 190
Query: 182 SLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGS 241
+ ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +KKG+E IGS
Sbjct: 191 KKTNCMVIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGSIKKGDEVIGS 248
Query: 242 QIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFR 300
+ VK+VKNK+APPFK A+F++ +G GISRE EIIDL + KAGA ++Y+ +R +
Sbjct: 249 ETRVKVVKNKVAPPFKQAEFDIMYGHGISREGEIIDLGVLTGVIDKAGAWYSYSGNRIGQ 308
Query: 301 GKEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETVS 349
GK+ ++++ N + E+ ++R+ + ++ T ++ ++S + VS
Sbjct: 309 GKDNVREYMKNNRDIVSEIEKRIRDNCIATNR---TVLSCDNSDDRYVS 354
>gi|417962082|ref|ZP_12604362.1| Protein recA, partial [Candidatus Arthromitus sp. SFB-2]
gi|380331197|gb|EIA22281.1| Protein recA, partial [Candidatus Arthromitus sp. SFB-2]
Length = 324
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 175/314 (55%), Positives = 248/314 (78%), Gaps = 4/314 (1%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
A++ A+ QI +GKGSIM LG + ++ VSTG LDIALG GGLPKGR++E+YGP
Sbjct: 9 AIEMAMSQIEKQYGKGSIMKLGEQ-SALNIESVSTGCLDLDIALGIGGLPKGRIIEVYGP 67
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTT+ALHVIAEAQ++GG FIDAEHALDPS A+ +GV TENL+++QPD GEQAL
Sbjct: 68 ESSGKTTVALHVIAEAQKKGGAAAFIDAEHALDPSYAKNLGVDTENLIISQPDNGEQALE 127
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ + L+RSG++DV+V+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRKL+ ++ S+
Sbjct: 128 IAEALVRSGAIDVIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLAGHINKSKC 187
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
+ IFINQ+R K+ FG P E T GG ALKFYASVRL+++RI +K+G+E +G++ VK
Sbjct: 188 VAIFINQLREKVGVM-FGNP-ETTPGGRALKFYASVRLDVRRIDSIKQGDEIVGNRTRVK 245
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRGKEAF 305
I+KNK+APPF+ ++F++ + +GIS+E ++DLA+K K+G+ F+Y N++ +G+E
Sbjct: 246 IMKNKVAPPFRISEFDIIYNRGISKEGSLLDLAVKENIIQKSGSWFSYKNEKLGQGRENA 305
Query: 306 KQFLVENESVREEL 319
KQFL+EN+S+ +E+
Sbjct: 306 KQFLLENKSILQEI 319
>gi|157804130|ref|YP_001492679.1| recombinase A [Rickettsia canadensis str. McKiel]
gi|166220673|sp|A8EZW1.1|RECA_RICCK RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|157785393|gb|ABV73894.1| recombinase A [Rickettsia canadensis str. McKiel]
Length = 343
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 190/327 (58%), Positives = 249/327 (76%), Gaps = 6/327 (1%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPR-HVPVVSTGSFALDIALGTGGLPKGRV 60
+ K+ A+ AL QI S+GKGS+M LG+ P + VSTGS LD+ALG GG+PKGR+
Sbjct: 4 TDKERAIAAALAQIEKSYGKGSVMKLGQR--PNIDIEAVSTGSLGLDMALGIGGVPKGRI 61
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+EI+GPE+SGKTTL LH+IAEAQ++GG C FIDAEHALDP+ A+ +GV + L+++QPD
Sbjct: 62 IEIFGPESSGKTTLTLHLIAEAQKKGGTCAFIDAEHALDPAYAKKLGVNIDELIISQPDT 121
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + DTLIRSG +D+V++DSVAALVPK E++GEMGDA MA QARLMSQALRKL+ S
Sbjct: 122 GEQALEITDTLIRSGGIDMVIIDSVAALVPKSEIEGEMGDAQMASQARLMSQALRKLTAS 181
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
+S + I +FINQ+R K+ FG P E T GGNALKFYASVR++I+RIG +K EE IG
Sbjct: 182 ISRTNCIAVFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRIDIRRIGSIKDKEEVIG 239
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYND-RNF 299
SQ VK+VKNK++PPFKTA F++ +G GIS+E EIIDL +K K+G+ F+YN+ R
Sbjct: 240 SQTKVKVVKNKVSPPFKTADFDIMYGSGISKEGEIIDLGVKLDIVEKSGSWFSYNNVRIG 299
Query: 300 RGKEAFKQFLVENESVREELVIKLREK 326
+G+E KQ+L E+ + E+ +REK
Sbjct: 300 QGRENVKQYLKEHPQIANEIEKIIREK 326
>gi|415716524|ref|ZP_11466516.1| recombinase A [Gardnerella vaginalis 1400E]
gi|388057141|gb|EIK79974.1| recombinase A [Gardnerella vaginalis 1400E]
Length = 384
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/344 (53%), Positives = 251/344 (72%), Gaps = 5/344 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
++ AL+ AL + +GKGS M LG + V V+ TGS ALD+ALG GG+P+GR+VE
Sbjct: 22 RRKAALETALANVEKQYGKGSAMRLGDKPL-QDVEVIPTGSIALDMALGIGGVPRGRIVE 80
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
+YGPE+SGKTTLALH++A AQ+ GG FIDAEHALDP A +GV T++L+++QPD GE
Sbjct: 81 VYGPESSGKTTLALHIVANAQKNGGIAAFIDAEHALDPVYARKLGVDTDSLIVSQPDNGE 140
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D LIRSG++DV+VVDSVAALVPK E+DG+MGD+H+ +QARLMSQALRK++ +LS
Sbjct: 141 QALEIADMLIRSGALDVIVVDSVAALVPKAEIDGDMGDSHVGLQARLMSQALRKMTGALS 200
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ T IFINQ+R K+ F FG P E T GG ALKFY+SVR++I+R+ +K GEE +G++
Sbjct: 201 QAGTTAIFINQLREKIGVF-FGNP-ETTTGGKALKFYSSVRMDIRRVSTIKNGEEAVGNR 258
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VKIVKNK+APPFKTA+F++ +G+GIS E +ID+A++ K+G+ FTY +G
Sbjct: 259 TKVKIVKNKMAPPFKTAEFDVLYGEGISTEGSVIDMAVQCDVIKKSGSWFTYEGEQLGQG 318
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQ-TAVTDEDST 344
+E +QFL +N ++ EE+ K++ + E Q V DED
Sbjct: 319 RENVRQFLKDNPAITEEISDKVKVAFGLMKPEDQFVEVEDEDDN 362
>gi|148897679|emb|CAM18493.1| recombinase A [Ochrobactrum intermedium]
Length = 299
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 179/299 (59%), Positives = 231/299 (77%), Gaps = 3/299 (1%)
Query: 11 ALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASG 70
AL QI +FGKGSIM LG++ + VSTGS +LDIALG GGLPKGR+VEIYGPE+SG
Sbjct: 3 ALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIVEIYGPESSG 62
Query: 71 KTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSLVDT 130
KTTLALH IAEAQ++GG C F+DAEHALDP A +GV ENLL++QPD GEQAL + DT
Sbjct: 63 KTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQALEITDT 122
Query: 131 LIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIF 190
L+RSG++DV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALR L+ S+S S ++IF
Sbjct: 123 LVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRTLTASISRSGCLVIF 182
Query: 191 INQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVKIVKN 250
INQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+ +E +G+Q VK+VKN
Sbjct: 183 INQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKERDEVVGNQTRVKVVKN 240
Query: 251 KLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGKEAFKQF 308
KLAPPFK +F++ +G G+S+ E++DL +K K+GA F+YN + +G+E KQ+
Sbjct: 241 KLAPPFKQVEFDIMYGAGVSKTGELVDLGVKAGVVEKSGAWFSYNSQRLGQGRENAKQY 299
>gi|42416865|gb|AAS16314.1| RecA [Mycobacterium houstonense]
gi|42416869|gb|AAS16316.1| RecA [Mycobacterium farcinogenes]
gi|42416879|gb|AAS16321.1| RecA [Mycobacterium senegalense]
Length = 349
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 180/325 (55%), Positives = 248/325 (76%), Gaps = 4/325 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
++ AL+ A+ QI +FGKGS+M LG V + + V+ TGS ALD+ALG GGLP+GRVVEI
Sbjct: 8 REKALELAMAQIDKNFGKGSVMRLGDEVR-QPISVIPTGSIALDVALGIGGLPRGRVVEI 66
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ALH +A AQ GG FIDAEHALDP A+ +GV T++LL++QPD GEQ
Sbjct: 67 YGPESSGKTTVALHAVANAQAAGGIAAFIDAEHALDPEYAKKLGVDTDSLLVSQPDTGEQ 126
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RSG++D++V+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ +L+
Sbjct: 127 ALEIADMLVRSGALDILVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTGALNN 186
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T IFINQ+R K+ FG P E T GG ALKFYASVR++++RI +K G + +G++
Sbjct: 187 SGTTAIFINQLREKIGVM-FGSP-ETTTGGKALKFYASVRMDVRRIETLKDGTDAVGNRT 244
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VKIVKNK++PPFK A+F++ +G+GISRE +ID+ ++H F K+G+ FTY +GK
Sbjct: 245 RVKIVKNKVSPPFKQAEFDILYGQGISREGSLIDMGVEHGFIRKSGSWFTYEGEQLGQGK 304
Query: 303 EAFKQFLVENESVREELVIKLREKL 327
E ++FL+EN V E+ K++EKL
Sbjct: 305 ENARKFLLENVDVANEIEKKIKEKL 329
>gi|89075065|ref|ZP_01161506.1| recombinase A [Photobacterium sp. SKA34]
gi|89049152|gb|EAR54717.1| recombinase A [Photobacterium sp. SKA34]
Length = 349
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/352 (53%), Positives = 248/352 (70%), Gaps = 11/352 (3%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGSIM LG + T + +STGS +LDIALG GGLP GR+VEI
Sbjct: 5 KQKALAAALGQIEKQFGKGSIMKLGDNRT-MDIETISTGSLSLDIALGAGGLPMGRIVEI 63
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L IA AQR+G C FIDAEHALDP A+ +GV + LL++QPD GEQ
Sbjct: 64 YGPESSGKTTLTLETIAAAQRKGKTCAFIDAEHALDPIYAQKLGVDIDQLLVSQPDTGEQ 123
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L RSG+VD++VVDSVAAL PK E++GEMGD+HM +QAR++SQA+RKL+ +L
Sbjct: 124 ALEICDALARSGAVDLIVVDSVAALTPKAEIEGEMGDSHMGLQARMLSQAMRKLTGNLKQ 183
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S + IFINQ+R K+ FG P E T GGNALKFYASVRL+I+R G +K+G+E +G++
Sbjct: 184 SNCMCIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRTGAIKEGDEVVGNET 241
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
+K+VKNK+A PFK A+ ++ +G+G +R E+IDL +KHK KAGA ++Y +GK
Sbjct: 242 RIKVVKNKIAAPFKQAETQILYGQGFNRNGELIDLGVKHKLVEKAGAWYSYQGNKIGQGK 301
Query: 303 EAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETVSTISPD 354
++LVEN ++ E+ KLR+ L+ T VT+ D +E + I D
Sbjct: 302 ANSCKYLVENPAIAAEIEKKLRDLLL-------TPVTEGDQVDENKADIKED 346
>gi|42416867|gb|AAS16315.1| RecA [Mycobacterium mucogenicum]
gi|42416891|gb|AAS16327.1| RecA [Mycobacterium mucogenicum]
Length = 350
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 179/325 (55%), Positives = 246/325 (75%), Gaps = 4/325 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
++ AL+ AL QI SFGKGS+M LG T + + V+ TGS ALD+ALG GGLP+GRV+EI
Sbjct: 8 REKALELALAQIDKSFGKGSVMRLGEE-TRQPISVIPTGSIALDVALGIGGLPRGRVIEI 66
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ALH +A AQ GG FIDAEHALDP A+ +GV T+ LL++QPD GEQ
Sbjct: 67 YGPESSGKTTVALHAVANAQAAGGIAAFIDAEHALDPEYAKKLGVDTDALLVSQPDTGEQ 126
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RSG++D++V+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ +L+
Sbjct: 127 ALEIADMLVRSGAIDILVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTGALNN 186
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T IFINQ+R K+ FG P E T GG ALKFYASVR++++RI +K G + +G++
Sbjct: 187 SGTTAIFINQLREKIGVM-FGSP-ETTTGGKALKFYASVRMDVRRIETLKDGTDAVGNRT 244
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VKIVKNK+APPFK A+F++ +G+GISRE +ID+ ++H F K+G+ FTY+ +GK
Sbjct: 245 RVKIVKNKVAPPFKQAEFDILYGRGISREGSLIDMGVEHGFIRKSGSWFTYDGEQLGQGK 304
Query: 303 EAFKQFLVENESVREELVIKLREKL 327
E + +L++N E+ K++EKL
Sbjct: 305 ENARNYLLQNVDAANEIEKKIKEKL 329
>gi|392957591|ref|ZP_10323114.1| recombinase A [Bacillus macauensis ZFHKF-1]
gi|391876554|gb|EIT85151.1| recombinase A [Bacillus macauensis ZFHKF-1]
Length = 349
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 180/325 (55%), Positives = 242/325 (74%), Gaps = 4/325 (1%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
MS + AL+ AL QI FGKGSIM LG R V +S+GS ALDIALG GG P+GR+
Sbjct: 1 MSDRKAALEMALRQIEKQFGKGSIMKLGEQAEQR-VSTISSGSLALDIALGVGGYPRGRI 59
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+E+YGPE+SGKTT+ALH IAE QR GG FIDAEHALDP A+ +GV + LLL+QPD
Sbjct: 60 IEVYGPESSGKTTVALHAIAEVQRNGGQAAFIDAEHALDPVYAQKLGVNIDELLLSQPDT 119
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + + L+RSG+VD++V+DSVAALVPK E++GEMGD+H+ +QARLMSQALRKLS +
Sbjct: 120 GEQALEIAEALVRSGAVDILVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLSGA 179
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
++ S+TI +FINQ+R K+ FG P E T GG ALKFY+SVRL ++R +K+G + +G
Sbjct: 180 INKSKTIAVFINQIREKVGVM-FGNP-ETTPGGRALKFYSSVRLEVRRAETLKQGTDMVG 237
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNF 299
++ +K+VKNK+APPFK A+ ++ +G+GISRE EI+D+ K+GA +++ DR
Sbjct: 238 NKTRIKVVKNKVAPPFKQAEVDIMYGEGISREGEILDIGSDIDIVQKSGAWYSFEGDRLG 297
Query: 300 RGKEAFKQFLVENESVREELVIKLR 324
+G+E KQFL EN + EE+V ++R
Sbjct: 298 QGRENSKQFLKENGDIAEEIVSQIR 322
>gi|302874936|ref|YP_003843569.1| recA protein [Clostridium cellulovorans 743B]
gi|302577793|gb|ADL51805.1| recA protein [Clostridium cellulovorans 743B]
Length = 357
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/354 (52%), Positives = 258/354 (72%), Gaps = 12/354 (3%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
A+Q A+ QI FGKG+IM LG + + V + TG ALD+ALG GG+P+GR+VEIYGP
Sbjct: 15 AIQAAMTQIEKQFGKGAIMTLGEN-SILDVDSIPTGCLALDVALGIGGVPRGRIVEIYGP 73
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTT+ALHV+AEAQ+QGG FID EHALDP+ A +GV TE+L+++QPD GEQAL
Sbjct: 74 ESSGKTTVALHVVAEAQKQGGAAAFIDVEHALDPAYARRVGVNTEDLIVSQPDTGEQALE 133
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ + L+RSG+VDVV+VDSVAALVPK E++GEMGDAH+ +QARLMSQALRKL+ S++ S+
Sbjct: 134 ITEALVRSGAVDVVIVDSVAALVPKAEIEGEMGDAHVGLQARLMSQALRKLAGSINKSKC 193
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
++IFINQ+R K+ FG P E T GG ALKFYASVRL+I++ +K+GE+ +G++ +K
Sbjct: 194 VVIFINQLREKVGIM-FGNP-ETTPGGRALKFYASVRLDIRKTDSIKQGEDVLGNRTKIK 251
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYND-RNFRGKEAF 305
++KNK+APPFK A+F++ + +GIS+ I+D+ +K + K+GA F+Y D R +G+E
Sbjct: 252 VIKNKVAPPFKLAEFDIMYNEGISKSGNILDVGVKEEIVQKSGAWFSYGDIRLGQGRENA 311
Query: 306 KQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETVSTISPDSTDEE 359
KQF VEN + E+ K+REK + P ++D E V+ D DE+
Sbjct: 312 KQFFVENPELALEVENKIREK----YNMPLIGLSDISKATEIVT----DELDED 357
>gi|290956979|ref|YP_003488161.1| DNA recombinase A [Streptomyces scabiei 87.22]
gi|260646505|emb|CBG69602.1| DNA recombinase A [Streptomyces scabiei 87.22]
Length = 375
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 189/359 (52%), Positives = 259/359 (72%), Gaps = 12/359 (3%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLG-RSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
+ ++ AL AL QI FGKG++M LG R P + V+ TGS ALD+ALG GGLP+GRV
Sbjct: 4 TDREKALDAALAQIERQFGKGAVMRLGERPNEP--IEVIPTGSTALDVALGVGGLPRGRV 61
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+E+YGPE+SGKTTL LH +A AQR GG F+DAEHALDP A+ +GV +NL+L+QPD
Sbjct: 62 IEVYGPESSGKTTLTLHAVANAQRAGGQVAFVDAEHALDPEYAKKLGVDIDNLILSQPDN 121
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL +VD L+RSG++D++V+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ +
Sbjct: 122 GEQALEIVDMLVRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITSA 181
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
L+ S+T IFINQ+R K+ FG P E T GG ALKFYASVRL+I+RI +K G + +G
Sbjct: 182 LNQSKTTAIFINQLREKIGVM-FGSP-ETTTGGRALKFYASVRLDIRRIETLKDGTDAVG 239
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNF 299
++ VK+VKNK+APPFK A+F++ +G+GISRE +ID+ +++ F KAGA +TY D+
Sbjct: 240 NRTRVKVVKNKVAPPFKQAEFDILYGQGISREGGLIDMGVENGFVRKAGAWYTYEGDQLG 299
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVDHK--EPQTAVTDEDSTEETVSTISPDST 356
+GKE + FL +N + E+ K++EKL V + EP T + + VS D T
Sbjct: 300 QGKENARNFLKDNPDLANEIEKKIKEKLGVGVRPEEP----TGQPGADAAVSATPADDT 354
>gi|402703063|ref|ZP_10851042.1| recombinase A [Rickettsia helvetica C9P9]
Length = 343
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 189/327 (57%), Positives = 249/327 (76%), Gaps = 6/327 (1%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPR-HVPVVSTGSFALDIALGTGGLPKGRV 60
+ K+ A+ AL QI S+GKGS+M LG+ P + VSTGS LDIALG GG+PKGR+
Sbjct: 4 TDKERAIAAALAQIEKSYGKGSVMKLGQR--PNVDIEAVSTGSLGLDIALGIGGVPKGRI 61
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+EI+GPE+SGKTTL LH+IAEAQ++GG C FIDAEHALDP+ A+ +GV + L+++QPD
Sbjct: 62 IEIFGPESSGKTTLTLHLIAEAQKKGGTCAFIDAEHALDPAYAKKLGVNIDELIISQPDT 121
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + DTLIRSG +D++++DSVAALVPK E++GEMGDA MA QARLMSQALRKL+ S
Sbjct: 122 GEQALEIADTLIRSGGIDMIIIDSVAALVPKSEIEGEMGDAQMASQARLMSQALRKLTAS 181
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
++ + I +FINQ+R K+ FG P E T GGNALKFYASVR++I+RIG +K EE IG
Sbjct: 182 INRTNCITVFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRIDIRRIGSIKDKEEVIG 239
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYND-RNF 299
SQ VK+VKNK++PPFKTA F++ +G GIS+E EIIDL +K K+G+ F+YN+ R
Sbjct: 240 SQTKVKVVKNKVSPPFKTADFDIMYGSGISKEGEIIDLGVKFDIVEKSGSWFSYNNVRIG 299
Query: 300 RGKEAFKQFLVENESVREELVIKLREK 326
+G+E KQ+L E+ + E+ +REK
Sbjct: 300 QGRENVKQYLKEHPQISNEIEKIIREK 326
>gi|291525257|emb|CBK90844.1| protein RecA [Eubacterium rectale DSM 17629]
gi|291529284|emb|CBK94870.1| protein RecA [Eubacterium rectale M104/1]
Length = 350
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 184/346 (53%), Positives = 252/346 (72%), Gaps = 6/346 (1%)
Query: 1 MSKKDL--ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKG 58
M+K+D AL A+ QI +GKGS+M LG + +V V TGS +LDIALG GGLPKG
Sbjct: 1 MAKEDKLKALDAAIAQIEKQYGKGSVMKLGDNSANMNVETVPTGSLSLDIALGLGGLPKG 60
Query: 59 RVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQP 118
R++E+YGPE+SGKTT+ALH +AE Q++GG FIDAEHALDP A IGV +NL ++QP
Sbjct: 61 RIIEVYGPESSGKTTVALHCVAEVQKRGGIAGFIDAEHALDPVYARNIGVDIDNLYISQP 120
Query: 119 DCGEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLS 178
DCGEQAL + +T++RSG+VD+VVVDSVAALVPK E+DG+MGD+H+ +QARLMSQALRKL+
Sbjct: 121 DCGEQALEITETMVRSGAVDIVVVDSVAALVPKAEIDGDMGDSHVGLQARLMSQALRKLT 180
Query: 179 HSLSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEET 238
+S S I+IFINQ+R K+ FG P E T GG ALKFY+SVRL+++R +K+G E
Sbjct: 181 AVISKSNCIVIFINQLREKVGVM-FGNP-ETTTGGRALKFYSSVRLDVRRTESLKQGGEI 238
Query: 239 IGSQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDR 297
+G+ + VK+VKNK+APPF+ A+F++ FG+GISRE +++DLA+ +K+GA + Y D+
Sbjct: 239 VGNHVRVKVVKNKIAPPFREAEFDIMFGQGISREGDVLDLAVNAGIVNKSGAWYAYEGDK 298
Query: 298 NFRGKEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDS 343
+G+E K ++ EN + + L K+R+ E + A EDS
Sbjct: 299 IGQGRENAKTYIHENPAFFDMLEAKVRD-FYFTQPEDEDAAVQEDS 343
>gi|293392772|ref|ZP_06637090.1| recombination protein A [Serratia odorifera DSM 4582]
gi|291424631|gb|EFE97842.1| recombination protein A [Serratia odorifera DSM 4582]
Length = 353
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 184/317 (58%), Positives = 233/317 (73%), Gaps = 4/317 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A+ +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV++VDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+G+E +GS+
Sbjct: 185 NANTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAIKEGDEVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +KHK KAGA ++YN +G
Sbjct: 243 TRVKVVKNKIAAPFKQAEFQIMYGEGINSRGELVDLGVKHKMIEKAGAWYSYNGEKIGQG 302
Query: 302 KEAFKQFLVENESVREE 318
K FL EN +V E
Sbjct: 303 KANACNFLKENPAVAAE 319
>gi|407803080|ref|ZP_11149918.1| recA protein [Alcanivorax sp. W11-5]
gi|407022935|gb|EKE34684.1| recA protein [Alcanivorax sp. W11-5]
Length = 346
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/347 (53%), Positives = 249/347 (71%), Gaps = 11/347 (3%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLG-RSVTPRHVPVVSTGSFALDIALGTGGLPKGRVV 61
K AL AL QI FGKGS+M +G R P +P +STGS LD+ALG GGLPKGR+V
Sbjct: 4 NKSKALSAALSQIERQFGKGSVMRMGDRKREP--MPAISTGSLGLDVALGIGGLPKGRIV 61
Query: 62 EIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCG 121
EIYGPE+SGKTTL L VIA+AQ+ G C F+DAEHALDP AE +GV ++L+++QPD G
Sbjct: 62 EIYGPESSGKTTLTLSVIAQAQKNGANCAFVDAEHALDPDYAEKLGVNVDDLIVSQPDTG 121
Query: 122 EQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSL 181
EQAL + D L+RSG+VDVV+VDSVAALVPK E++GEMGD H+ +QARLMSQALRK++ S+
Sbjct: 122 EQALEITDMLVRSGAVDVVIVDSVAALVPKAEIEGEMGDHHVGVQARLMSQALRKITGSV 181
Query: 182 SLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGS 241
+ ++IFINQ+R K+ FG P E T GGNALKFY+SVRL+I+RIG VK+G+E IGS
Sbjct: 182 KNANCLVIFINQIRMKIGVM-FGNP-ETTTGGNALKFYSSVRLDIRRIGAVKQGDEVIGS 239
Query: 242 QIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFR 300
+ VK+VKNK+APPF+ A+F++ +G GI+ EI+D+ ++ K+GA + Y D+ +
Sbjct: 240 ETRVKVVKNKVAPPFRQAEFQILYGSGINNLGEILDMGVQLGLIDKSGAWYAYKGDKIGQ 299
Query: 301 GKEAFKQFLVENESVREELVIKLREKLVV-----DHKEPQTAVTDED 342
GK+ FL +N R+E+ ++R +L+ KE V +ED
Sbjct: 300 GKQNACDFLRDNPQARDEVEAQIRARLLAPVNKESSKEEAQVVEEED 346
>gi|312115731|ref|YP_004013327.1| recA protein [Rhodomicrobium vannielii ATCC 17100]
gi|311220860|gb|ADP72228.1| recA protein [Rhodomicrobium vannielii ATCC 17100]
Length = 378
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/322 (56%), Positives = 242/322 (75%), Gaps = 3/322 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI +FGKGS+M LG++ V +STGS LDIALG GGLP+GRVVEI
Sbjct: 18 KQKALEAALSQIERNFGKGSVMRLGKNDKLVEVEAISTGSLGLDIALGIGGLPRGRVVEI 77
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
+GPE+SGKTTLALHVIAEAQ++GG C F+DAEHALDP A +GV E L+++QPD GEQ
Sbjct: 78 FGPESSGKTTLALHVIAEAQKKGGSCGFVDAEHALDPGYARKLGVNLEELIISQPDAGEQ 137
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+VVDSVAAL PK E++GEMGD MQARLMSQALRKL+ S+S
Sbjct: 138 ALEITDTLVRSGAIDVIVVDSVAALTPKAEIEGEMGDVLPGMQARLMSQALRKLTGSISK 197
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFY+SVRL+I+RIG +K+ +E +G+Q
Sbjct: 198 SNCLVIFINQIRMKIGVM-FGNP-ETTTGGNALKFYSSVRLDIRRIGQIKERDEVVGNQT 255
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+GIS+ E++DL +K K+G+ ++++ + +G+
Sbjct: 256 RVKVVKNKVAPPFKQVEFDIMYGEGISKTGELVDLGVKANIVEKSGSWYSHDSQRIGQGR 315
Query: 303 EAFKQFLVENESVREELVIKLR 324
E K FL N V E + ++R
Sbjct: 316 ENAKAFLRGNPLVAEAIEREIR 337
>gi|421484021|ref|ZP_15931593.1| recombinase A [Achromobacter piechaudii HLE]
gi|400197728|gb|EJO30692.1| recombinase A [Achromobacter piechaudii HLE]
Length = 353
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/333 (54%), Positives = 243/333 (72%), Gaps = 3/333 (0%)
Query: 14 QITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASGKTT 73
QI FGKGSIM G + + VVSTGS LDIALG GGLP+GRVVEIYGPE+SGKTT
Sbjct: 23 QIEKQFGKGSIMRYGDNEVSHDIQVVSTGSLGLDIALGVGGLPRGRVVEIYGPESSGKTT 82
Query: 74 LALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSLVDTLIR 133
L L VIAE Q+ GG C F+DAEHALD A +GV +LL++QPD GEQAL + D L+R
Sbjct: 83 LTLQVIAEMQKIGGTCAFVDAEHALDVQYANKLGVNLTDLLISQPDTGEQALEITDALVR 142
Query: 134 SGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFINQ 193
SGSVD++V+DSVAALVPK E++GEMGD+ +QARLMSQALRKL+ ++ + ++IFINQ
Sbjct: 143 SGSVDLIVIDSVAALVPKAEIEGEMGDSLPGLQARLMSQALRKLTATIKRTNCMVIFINQ 202
Query: 194 VRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVKIVKNKLA 253
+R K+ FG P E T GGNALKFYASVRL+I+RIG +KKG+E +G++ VK+VKNK+A
Sbjct: 203 IRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGSIKKGDEVVGNETRVKVVKNKVA 260
Query: 254 PPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGKEAFKQFLVEN 312
PPFK A+F++ +G GISRE EIIDL + K+GA ++YN +R +GK+ +++L E+
Sbjct: 261 PPFKQAEFDIMYGAGISREGEIIDLGVAASVVDKSGAWYSYNGNRIGQGKDNVREYLKEH 320
Query: 313 ESVREELVIKLREKLVVDHKEPQTAVTDEDSTE 345
+ + E+ ++RE + + + T ED+ E
Sbjct: 321 KEIAIEIENRVRENQGIVSRAAEFVPTAEDTAE 353
>gi|225076519|ref|ZP_03719718.1| hypothetical protein NEIFLAOT_01567 [Neisseria flavescens
NRL30031/H210]
gi|241760080|ref|ZP_04758178.1| protein RecA [Neisseria flavescens SK114]
gi|261380311|ref|ZP_05984884.1| protein RecA [Neisseria subflava NJ9703]
gi|319638110|ref|ZP_07992874.1| RecA protein [Neisseria mucosa C102]
gi|224952198|gb|EEG33407.1| hypothetical protein NEIFLAOT_01567 [Neisseria flavescens
NRL30031/H210]
gi|241319534|gb|EER55964.1| protein RecA [Neisseria flavescens SK114]
gi|284796826|gb|EFC52173.1| protein RecA [Neisseria subflava NJ9703]
gi|317400755|gb|EFV81412.1| RecA protein [Neisseria mucosa C102]
Length = 348
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/336 (54%), Positives = 244/336 (72%), Gaps = 5/336 (1%)
Query: 14 QITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASGKTT 73
QI +FGKGSIM + S ++ V+STGS +D+ALG GGLP+GRVVEI+GPE+SGKTT
Sbjct: 15 QIEKNFGKGSIMKMDGSQQEENLDVISTGSLGVDLALGVGGLPRGRVVEIFGPESSGKTT 74
Query: 74 LALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSLVDTLIR 133
L L IA+ Q+ GG C FIDAEHA DP A +GVK E L L+QPD GEQAL + DTL+R
Sbjct: 75 LCLEAIAQCQKNGGICAFIDAEHAFDPIYARKLGVKVEELYLSQPDTGEQALEICDTLVR 134
Query: 134 SGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFINQ 193
SG +D+VVVDSVAALVPK E++GEMGD+H+ +QARLMSQALRKL+ + + T+++FINQ
Sbjct: 135 SGGIDMVVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTGHIKRTNTLVVFINQ 194
Query: 194 VRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVKIVKNKLA 253
+R K+ FG P E T GGNALKFYASVRL+I+R G +KKG++ IG++ VK++KNK+A
Sbjct: 195 IRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRTGQIKKGDDVIGNETKVKVIKNKVA 252
Query: 254 PPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGKEAFKQFLVEN 312
PPF+ A+F++ +G+GIS E E+IDL +KH K+GA ++YN +GK+ + +L EN
Sbjct: 253 PPFRQAEFDILYGEGISWEGELIDLGVKHDIVEKSGAWYSYNGAKIGQGKDNVRVWLKEN 312
Query: 313 ESVREELVIKLREK--LVVDHKEPQTAVTDEDSTEE 346
+ E+ K+R + VD E + TD + EE
Sbjct: 313 PDIANEIDAKIRAAVGINVDITEGKLDDTDGERPEE 348
>gi|384918639|ref|ZP_10018709.1| recombinase A [Citreicella sp. 357]
gi|384467473|gb|EIE51948.1| recombinase A [Citreicella sp. 357]
Length = 360
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/337 (54%), Positives = 241/337 (71%), Gaps = 3/337 (0%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL AL QI FGKGSIM LG + + STGS LDIALG GGLPKGR++EIYGP
Sbjct: 20 ALDSALAQIERQFGKGSIMKLGGENAIKDIESTSTGSLGLDIALGIGGLPKGRIIEIYGP 79
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTTL LHV+AE Q++GG C F+DAEHALDP A +GV + LL++QPD GEQAL
Sbjct: 80 ESSGKTTLTLHVVAEEQKKGGVCAFVDAEHALDPQYARKLGVNLDELLISQPDTGEQALE 139
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ DTL+RSG+V +VVVDSVAAL PK EL+G+MGD+ + + ARLMSQA+RKL+ S+S S
Sbjct: 140 ITDTLVRSGAVSLVVVDSVAALTPKSELEGDMGDSSVGVHARLMSQAMRKLTGSISRSNC 199
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
+++FINQ+R K+ FG P E T GGNALKFY+SVRL+I+RIG +K +E +G+Q VK
Sbjct: 200 MVVFINQIRMKIGVM-FGSP-ETTTGGNALKFYSSVRLDIRRIGSIKDRDEVVGNQTRVK 257
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYND-RNFRGKEAF 305
+VKNK+APPFK +F++ +G+GIS+ E++DL +K K+GA ++Y D R +G+E
Sbjct: 258 VVKNKVAPPFKQVEFDIMYGEGISKMGELLDLGVKAGVVDKSGAWYSYGDERIGQGRENA 317
Query: 306 KQFLVENESVREELVIKLREKLVVDHKEPQTAVTDED 342
K +L EN + E+ K+R +D P DED
Sbjct: 318 KNYLRENTRISLEIEDKIRAAHGLDFHMPDPEGRDED 354
>gi|331003604|ref|ZP_08327100.1| RecA protein [Lachnospiraceae oral taxon 107 str. F0167]
gi|330412324|gb|EGG91716.1| RecA protein [Lachnospiraceae oral taxon 107 str. F0167]
Length = 389
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 176/325 (54%), Positives = 244/325 (75%), Gaps = 3/325 (0%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVV 61
S+K AL+ AL QI ++GKGS+M LG T HV + TGS LDIALG GG+PKGR++
Sbjct: 20 SEKQAALESALTQIEKAYGKGSVMKLGDENTHMHVETIPTGSLGLDIALGVGGIPKGRII 79
Query: 62 EIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCG 121
E+YGPE+SGKTT+ALH++AEAQ+ GG FIDAEHALDP+ AE IGV L ++QPD G
Sbjct: 80 EVYGPESSGKTTVALHMVAEAQKLGGIAAFIDAEHALDPAYAEKIGVNINELYVSQPDNG 139
Query: 122 EQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSL 181
EQAL + +T++RSG+VD+++VDSVAALVPKGE++G+MGD+HM +QARLMSQ LRKL+ +
Sbjct: 140 EQALEITETMVRSGAVDIIIVDSVAALVPKGEIEGDMGDSHMGLQARLMSQGLRKLTGIV 199
Query: 182 SLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGS 241
S S I+IFINQ+R K+ FG P E T GG ALKFYASVRL+++++ +K+G E IG+
Sbjct: 200 SKSNCIVIFINQLRDKIGVM-FGSP-ETTTGGRALKFYASVRLDVRKVEQIKQGGELIGT 257
Query: 242 QIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-R 300
+ +K+VKNK+APPFK A+F++ +G GIS+ EI+DLA+ K GA ++Y +
Sbjct: 258 KTRIKVVKNKVAPPFKEAEFDIMYGLGISKSGEILDLAVASDVIDKGGAWYSYEGNKIGQ 317
Query: 301 GKEAFKQFLVENESVREELVIKLRE 325
G+E K+FL++N + +++ ++RE
Sbjct: 318 GRENAKKFLMDNPEICKKIEEQVRE 342
>gi|431927972|ref|YP_007241006.1| protein RecA [Pseudomonas stutzeri RCH2]
gi|431826259|gb|AGA87376.1| protein RecA [Pseudomonas stutzeri RCH2]
Length = 347
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/341 (53%), Positives = 243/341 (71%), Gaps = 4/341 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKG++M +G + +P +STGS LDIALG GGLPKGR+VE
Sbjct: 4 NKKRALAAALGQIEKQFGKGAVMRMGDH-DRQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIAEAQ+ G C F+DAEHALDP A +GV ++LL++QPD GE
Sbjct: 63 IYGPESSGKTTLTLSVIAEAQKMGATCAFVDAEHALDPDYAGKLGVNVDDLLVSQPDTGE 122
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L+RS +VDV++VDSVAALVPK E++GEMGD H+ +QARLMSQALRK++ ++
Sbjct: 123 QALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDTHVGLQARLMSQALRKITGNIK 182
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+R G VK+G+E +GS+
Sbjct: 183 NANCLVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSE 240
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK+VKNK+APPF+ A+F++ +GKGI R E+IDL ++ K+GA + Y +G
Sbjct: 241 TRVKVVKNKVAPPFRQAEFQILYGKGIYRSGEVIDLGVQQGLVEKSGAWYAYKGNKIGQG 300
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDED 342
K +FL +N + E+ ++R+KL+V + V ED
Sbjct: 301 KANAAKFLEDNPEIGREIEQQIRDKLLVVSGGSKANVVSED 341
>gi|255281677|ref|ZP_05346232.1| protein RecA [Bryantella formatexigens DSM 14469]
gi|255267744|gb|EET60949.1| RecA protein [Marvinbryantia formatexigens DSM 14469]
Length = 387
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 185/337 (54%), Positives = 246/337 (72%), Gaps = 5/337 (1%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL AL QI FGKGS+M LG S +V V TGS +LDIALG GG+PKGR+VEIYGP
Sbjct: 9 ALDAALSQIEKQFGKGSVMKLGDSGKNLNVETVPTGSLSLDIALGLGGIPKGRIVEIYGP 68
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTT+ALH++AE Q++GG FIDAEHALDP A IGV +NL ++QPD GEQA+
Sbjct: 69 ESSGKTTVALHMVAEVQKRGGVAGFIDAEHALDPVYASRIGVDIDNLYISQPDNGEQAME 128
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ +TL+RSG+VD+++VDSVAALVPK E+DG+MGD+H+ +QARLMSQALRKL+ +S S
Sbjct: 129 ITETLVRSGAVDIIIVDSVAALVPKAEIDGDMGDSHVGLQARLMSQALRKLTAVISKSNC 188
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
I+IFINQ+R K+ FG P E T GG ALKFY+S+RL++++ +K+ E IG+ +K
Sbjct: 189 IVIFINQLREKIGVM-FGNP-ETTTGGRALKFYSSIRLDVRKGEALKQAGEVIGNHTRIK 246
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGKEAF 305
+VKNK+APPFK A+F++ FG+GISRE +IIDLA +K+GA + YND +G+E
Sbjct: 247 VVKNKIAPPFKEAEFDIMFGQGISREGDIIDLAANIGVINKSGAWYAYNDAKIGQGRENA 306
Query: 306 KQFLVENESVREELVIKLREK--LVVDHKEPQTAVTD 340
K +L EN ++ +E+ K+RE L VD K + D
Sbjct: 307 KAYLRENPAIMDEVEAKVREHYGLPVDKKPSEEKPAD 343
>gi|89092117|ref|ZP_01165072.1| recombinase A [Neptuniibacter caesariensis]
gi|89083852|gb|EAR63069.1| recombinase A [Oceanospirillum sp. MED92]
Length = 346
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/341 (53%), Positives = 247/341 (72%), Gaps = 9/341 (2%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRH-VPVVSTGSFALDIALGTGGLPKGRVVEIYG 65
AL AL QI FGKG++M +G PR +P VSTGS LDIALG GGLP GR+VEIYG
Sbjct: 8 ALDAALSQIERQFGKGAVMRMGDQ--PREAIPSVSTGSLGLDIALGIGGLPYGRIVEIYG 65
Query: 66 PEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQAL 125
PE+SGKTTL L V+AEAQ+QG C F+DAEHALDP AE +GV ++LL++QPD GEQAL
Sbjct: 66 PESSGKTTLTLQVVAEAQKQGKTCAFVDAEHALDPIYAEKLGVDVDSLLVSQPDTGEQAL 125
Query: 126 SLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQ 185
+ D L+RS +VDV++VDSVAAL PK E++G+MGD+H+ +QARLMSQALRKL+ ++ S
Sbjct: 126 EITDMLVRSNAVDVIIVDSVAALTPKAEIEGDMGDSHVGLQARLMSQALRKLTGNVKSSN 185
Query: 186 TILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAV 245
+L+FINQ+R K+ FG P E T GGNALKFY+SVRL+I+R G +K+G+E +G++ V
Sbjct: 186 CLLVFINQIRMKIGVM-FGNP-ETTTGGNALKFYSSVRLDIRRTGAIKQGDEVVGNETRV 243
Query: 246 KIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGKEA 304
K+VKNK++PPF+ A+F++ +G+GI E+IDL +K K+GA + YN D+ +GK
Sbjct: 244 KVVKNKVSPPFRQAEFQIMYGQGIYHMGEVIDLGVKEGLVDKSGAWYAYNGDKIGQGKAN 303
Query: 305 FKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTE 345
+FL EN + E+ +LR +L+ + P +ED +E
Sbjct: 304 ASKFLEENPQIANEIETELRSRLLSN---PLDKPAEEDESE 341
>gi|397686222|ref|YP_006523541.1| recombinase A [Pseudomonas stutzeri DSM 10701]
gi|395807778|gb|AFN77183.1| recombinase A [Pseudomonas stutzeri DSM 10701]
Length = 347
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/341 (53%), Positives = 242/341 (70%), Gaps = 4/341 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKG++M +G + +P +STGS LDIALG GGLPKGR+VE
Sbjct: 4 NKKRALAAALGQIEKQFGKGAVMRMGDH-DRQAIPSISTGSLGLDIALGIGGLPKGRIVE 62
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR G C F+DAEHALDP A +GV ++LL++QPD GE
Sbjct: 63 IYGPESSGKTTLTLSVIAAAQRMGSTCAFVDAEHALDPDYAGKLGVNVDDLLVSQPDTGE 122
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L+RS +VDV++VDSVAALVPK E++GEMGDAH+ +QARLMSQALRK++ ++
Sbjct: 123 QALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDAHVGLQARLMSQALRKITGNIK 182
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+R G VK+G+E +GS+
Sbjct: 183 NANCLVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSE 240
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK+VKNK+APPF+ A+F++ +GKGI R EIIDL ++ K+GA + Y +G
Sbjct: 241 TRVKVVKNKVAPPFRQAEFQILYGKGIYRNGEIIDLGVQQGLVEKSGAWYAYKGSKIGQG 300
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDED 342
K ++L EN + +E+ ++R KL+V + ED
Sbjct: 301 KANAAKYLEENPEIGQEIEQQIRAKLLVTSANTKATPVAED 341
>gi|451940784|ref|YP_007461422.1| recombinase A [Bartonella australis Aust/NH1]
gi|451900171|gb|AGF74634.1| recombinase A [Bartonella australis Aust/NH1]
Length = 347
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/324 (58%), Positives = 236/324 (72%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI SFGKGSIM LG+ + VSTGS +LDIALG GGLPKGR++EI
Sbjct: 3 KTKALDAALSQIERSFGKGSIMRLGQKEQVVEIETVSTGSLSLDIALGIGGLPKGRIIEI 62
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH IAE Q+ GG C FIDAEHALDP A +GV ENL ++QPD GEQ
Sbjct: 63 YGPESSGKTTLALHSIAEIQKSGGVCAFIDAEHALDPVYARKLGVDLENLFISQPDTGEQ 122
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + +TL+RSG+VDV+VVDSVAAL P+ E+DGEM D+ +QARLMS+ALRKL+ S+
Sbjct: 123 ALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMSDSLPGLQARLMSKALRKLTASIFR 182
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K + IG+Q
Sbjct: 183 SNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAIKDRDIVIGNQT 240
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G+GIS+ E+IDL K K+GA F+YN + +G+
Sbjct: 241 RVKVVKNKLAPPFKQVEFDIIYGEGISKLGELIDLGAKVGIVEKSGAWFSYNSQRLGQGR 300
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E KQFL E+ + E+ LR+
Sbjct: 301 ENAKQFLREHPEIAAEIETALRQN 324
>gi|312195020|ref|YP_004015081.1| recA protein [Frankia sp. EuI1c]
gi|311226356|gb|ADP79211.1| recA protein [Frankia sp. EuI1c]
Length = 345
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 179/325 (55%), Positives = 244/325 (75%), Gaps = 4/325 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
+D AL AL QI FGKGS+M LG T + + TGS ALD+ALG GGLP+GR++EI
Sbjct: 6 RDKALDNALAQIDKQFGKGSVMRLGDE-TRAPIQAIPTGSIALDVALGIGGLPRGRIIEI 64
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ALH +A AQ GG FIDAEHALDP A +GV T+NLL++QPD GEQ
Sbjct: 65 YGPESSGKTTVALHAVASAQAAGGIAAFIDAEHALDPDYAGKLGVDTDNLLVSQPDTGEQ 124
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RSG++D++V+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ +LS
Sbjct: 125 ALEIADLLVRSGALDIIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTGALSN 184
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T IFINQ+R K+ FG P E T GG ALKFYASVRL+++RI +K G + +G++
Sbjct: 185 SNTTAIFINQLREKIGVM-FGSP-ETTTGGKALKFYASVRLDVRRIETLKDGADAVGNRT 242
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGK 302
VK+VKNK+APPF+TA+F++ +G GISRE +ID+ ++H K+GA +TY+ D+ +GK
Sbjct: 243 RVKVVKNKVAPPFRTAEFDIVYGGGISREGSLIDMGVEHAIIRKSGAWYTYDGDQLGQGK 302
Query: 303 EAFKQFLVENESVREELVIKLREKL 327
E + FL +N + +E+ +++EKL
Sbjct: 303 ENARNFLRDNPDLADEIEKRIKEKL 327
>gi|242133650|gb|ACS87936.1| RecA [Burkholderia cepacia]
Length = 333
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 185/324 (57%), Positives = 237/324 (73%), Gaps = 3/324 (0%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL AL QI FGKGSIM +G + VVSTGS LDIALG GGLP+GRVVEIYGP
Sbjct: 1 ALAAALAQIEKQFGKGSIMRMGDGEAAEDIQVVSTGSLGLDIALGVGGLPRGRVVEIYGP 60
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTTL L VIAE QR GG FIDAEHALD A +GV LL++QPD GEQAL
Sbjct: 61 ESSGKTTLTLQVIAELQRIGGTAAFIDAEHALDVQYASKLGVNVPELLISQPDTGEQALE 120
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ D L+RSGS+D++V+DSVAALVPK E++GEMGD+ +QARLMSQALRKL+ ++ +
Sbjct: 121 ITDALVRSGSIDMIVIDSVAALVPKAEIEGEMGDSLPGLQARLMSQALRKLTGTIKRTNC 180
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +KK +E IG++ VK
Sbjct: 181 LVIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGSIKKNDEVIGNETRVK 238
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGKEAF 305
+VKNK++PPF+ A F++ +G+GISR+ EIIDL ++ K KAGA ++YN +GK+
Sbjct: 239 VVKNKVSPPFREAIFDILYGEGISRQGEIIDLGVQAKIVDKAGAWYSYNGEKIGQGKDNA 298
Query: 306 KQFLVENESVREELVIKLREKLVV 329
++FL EN + E+ ++RE L V
Sbjct: 299 REFLRENPEIAREIENRIRESLGV 322
>gi|157374439|ref|YP_001473039.1| recombinase A [Shewanella sediminis HAW-EB3]
gi|189039610|sp|A8FST8.1|RECA_SHESH RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|157316813|gb|ABV35911.1| Calcium-transporting ATPase [Shewanella sediminis HAW-EB3]
Length = 353
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/348 (53%), Positives = 248/348 (71%), Gaps = 8/348 (2%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVV 61
+ K+ AL L QI FGKGSIM LG + + V +STGS +LDIALG GGLP GR+V
Sbjct: 5 ANKEKALNAVLGQIEKQFGKGSIMKLGENRS-MDVETISTGSLSLDIALGAGGLPMGRIV 63
Query: 62 EIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCG 121
EIYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A+ +GV +NLL +QPD G
Sbjct: 64 EIYGPESSGKTTLTLEVIAAAQREGKVCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTG 123
Query: 122 EQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSL 181
EQAL + D L RSG+VDV+VVDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 124 EQALEICDALTRSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNL 183
Query: 182 SLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGS 241
+ T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+R G +K +E IG+
Sbjct: 184 KQTNTMLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRTGAIKDRDEVIGN 241
Query: 242 QIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFR 300
+ VK+VKNK+A PFK A+F++ +G+GI+ E++DL + HK KAGA ++Y D+ +
Sbjct: 242 ETRVKVVKNKIAAPFKQAEFQILYGQGINSTGELVDLGVAHKLVEKAGAWYSYKGDKIGQ 301
Query: 301 GKEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETV 348
G+ ++L+EN +V +E+ + LR L+ P V D + +E +
Sbjct: 302 GRANAGKYLIENPAVAQEIDVALRALLLT----PAAPVADSATGDENI 345
>gi|441513616|ref|ZP_20995444.1| RecA protein [Gordonia amicalis NBRC 100051]
gi|441451562|dbj|GAC53405.1| RecA protein [Gordonia amicalis NBRC 100051]
Length = 347
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/325 (55%), Positives = 248/325 (76%), Gaps = 4/325 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
++ AL AL QI +FGKGS+M LG T + + ++ TGS ALD+ALG GGLP+GRVVEI
Sbjct: 8 REKALDLALAQIDKNFGKGSVMRLGEE-TRQPIEIIPTGSIALDVALGIGGLPRGRVVEI 66
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ALH +A AQ GG FIDAEHALDP A +GV T+ LL++QPD GEQ
Sbjct: 67 YGPESSGKTTVALHAVANAQALGGIAAFIDAEHALDPDYAAKLGVDTDALLVSQPDTGEQ 126
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D LIRSG++D++V+DSVAALVPK E++GEMGD+H+ +QARLMSQALRK++ +L+
Sbjct: 127 ALEIADMLIRSGALDILVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKMTSALNQ 186
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+T IFINQ+R K+ FG P E T GG ALKFY+SVRL+++RI +K G + +G++
Sbjct: 187 SKTTAIFINQLREKIGVM-FGSP-ETTTGGKALKFYSSVRLDVRRIETLKDGTDAVGNRT 244
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRGK 302
VK+VKNK+APPFK A+F++ +G+GIS+E +ID+ + F K+G+ FTY D+ +GK
Sbjct: 245 RVKVVKNKVAPPFKQAEFDILYGQGISKEGSLIDMGVAEGFIRKSGSWFTYEGDQLGQGK 304
Query: 303 EAFKQFLVENESVREELVIKLREKL 327
E ++FL+EN +R+E+ K++EKL
Sbjct: 305 ENARKFLLENVDIRDEIEKKIKEKL 329
>gi|242133648|gb|ACS87935.1| RecA [Burkholderia cepacia]
Length = 333
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 184/324 (56%), Positives = 238/324 (73%), Gaps = 3/324 (0%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL AL QI FGKGSIM +G + VVSTGS LDIALG GGLP+GRVVEIYGP
Sbjct: 1 ALAAALAQIEKQFGKGSIMRMGDGEAAEDIQVVSTGSLGLDIALGVGGLPRGRVVEIYGP 60
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTTL L VIAE Q+ GG FIDAEHALD A +GV LL++QPD GEQAL
Sbjct: 61 ESSGKTTLTLQVIAELQKIGGTAAFIDAEHALDVQYASKLGVNVPELLISQPDTGEQALE 120
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ D L+RSGS+D++V+DSVAALVPK E++GEMGD+ +QARLMSQALRKL+ ++ +
Sbjct: 121 ITDALVRSGSIDMIVIDSVAALVPKAEIEGEMGDSLPGLQARLMSQALRKLTGTIKRTNC 180
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +KK +E IG++ VK
Sbjct: 181 LVIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGSIKKNDEVIGNETRVK 238
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGKEAF 305
+VKNK++PPF+ A F++ +G+GISR+ EIIDL ++ K KAGA ++YN +GK+
Sbjct: 239 VVKNKVSPPFREAIFDILYGEGISRQGEIIDLGVQAKIVDKAGAWYSYNGEKIGQGKDNA 298
Query: 306 KQFLVENESVREELVIKLREKLVV 329
++FL+EN + E+ ++RE L V
Sbjct: 299 REFLLENPEIAREIENRIRESLGV 322
>gi|422419000|ref|ZP_16495955.1| protein RecA [Listeria seeligeri FSL N1-067]
gi|422422112|ref|ZP_16499065.1| protein RecA [Listeria seeligeri FSL S4-171]
gi|38258437|sp|Q83TH4.1|RECA_LISSE RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|30265989|gb|AAN15810.1| RecA [Listeria seeligeri]
gi|30265991|gb|AAN15811.1| RecA [Listeria seeligeri]
gi|56182513|gb|AAV84009.1| RecA [Listeria seeligeri]
gi|56182515|gb|AAV84010.1| RecA [Listeria seeligeri]
gi|56182517|gb|AAV84011.1| RecA [Listeria seeligeri]
gi|56182519|gb|AAV84012.1| RecA [Listeria seeligeri]
gi|56182521|gb|AAV84013.1| RecA [Listeria seeligeri]
gi|56182523|gb|AAV84014.1| RecA [Listeria seeligeri]
gi|66735132|gb|AAY53807.1| RecA [Listeria seeligeri]
gi|313633314|gb|EFS00165.1| protein RecA [Listeria seeligeri FSL N1-067]
gi|313637916|gb|EFS03233.1| protein RecA [Listeria seeligeri FSL S4-171]
Length = 348
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 174/331 (52%), Positives = 252/331 (76%), Gaps = 4/331 (1%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
M+ + AL QAL QI FGKGSIM LG + +++ +S+GS ALDIALG GG P+GR+
Sbjct: 1 MNDRQAALDQALKQIEKQFGKGSIMKLGEH-SDQNISTISSGSLALDIALGVGGYPRGRI 59
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+E+YGPE+SGKTT+ALH IAE Q QGG FIDAEHALDP+ A+ +GV + LLL+QPD
Sbjct: 60 IEVYGPESSGKTTVALHAIAEVQAQGGTAAFIDAEHALDPAYAKNLGVNIDELLLSQPDT 119
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + + L+RSG+VD++V+DSVAALVP+ E++GEMGDAH+ +QARLMSQALRKLS +
Sbjct: 120 GEQALEIAEALVRSGAVDMLVIDSVAALVPRAEIEGEMGDAHVGLQARLMSQALRKLSGA 179
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
++ S+TI IFINQ+R K+ FG P E+T GG ALKFY++VRL ++R +K+G + +G
Sbjct: 180 INKSKTIAIFINQIREKVGVM-FGNP-EITPGGRALKFYSTVRLEVRRAEQLKQGTDVMG 237
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF- 299
++ +K+VKNK+APPF+ A+ ++ +G+GISRE E++D+A + +K+G+ ++Y +
Sbjct: 238 NKTKIKVVKNKVAPPFRIAEVDIMYGEGISREGELVDMAAEVDVINKSGSWYSYKEERIG 297
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVD 330
+G+E KQ+L E+ +R+E+ ++RE+ +D
Sbjct: 298 QGRENAKQYLKEHTDIRDEISKRVREEYEID 328
>gi|315604454|ref|ZP_07879520.1| recombination protein A [Actinomyces sp. oral taxon 180 str. F0310]
gi|315314160|gb|EFU62211.1| recombination protein A [Actinomyces sp. oral taxon 180 str. F0310]
Length = 363
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/355 (52%), Positives = 251/355 (70%), Gaps = 12/355 (3%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVV 61
+ ++ AL+ AL QI FGKGS+M LG P V V+ TGS ALD+ALG GGLP+GRV+
Sbjct: 14 NDRNKALEVALSQIDKQFGKGSVMRLGDDNRP-PVQVIPTGSLALDVALGIGGLPRGRVI 72
Query: 62 EIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCG 121
EIYGPE+SGKTT+ALH +A AQ+ GG FIDAEHALDP A +GV T++LL++QPD G
Sbjct: 73 EIYGPESSGKTTVALHAVASAQKAGGNAAFIDAEHALDPVYARALGVDTDSLLVSQPDTG 132
Query: 122 EQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSL 181
EQAL + D LIRSG +D++V+DSVAALVPK E++GEMGD+H+ +QARLMSQALRK++ +L
Sbjct: 133 EQALEIADMLIRSGGIDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITGAL 192
Query: 182 SLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGS 241
S + T IFINQ+R K+ F FG P E T GG ALKFYASVR++++RI +K+ +G+
Sbjct: 193 SATGTTAIFINQLREKIGVF-FGSP-ETTTGGKALKFYASVRIDVRRIETLKEAGAPVGN 250
Query: 242 QIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-R 300
+ K+VKNK+APPFK A+F++ +GKGISRE IID+ ++ K+G+ FTY D +
Sbjct: 251 RTRAKVVKNKMAPPFKQAEFDIVYGKGISREGSIIDMGVEAGIVRKSGSWFTYGDDQLGQ 310
Query: 301 GKEAFKQFLVENESVREELVIKLREKL-VVDHKEPQTAVTDEDSTEETVSTISPD 354
GKE +QFL +N + E+ K+ L + D EP+ + + S I PD
Sbjct: 311 GKENVRQFLADNPELANEIEQKILLSLGIGDAPEPE-------APSQEASAIDPD 358
>gi|345009758|ref|YP_004812112.1| recombinase A [Streptomyces violaceusniger Tu 4113]
gi|344036107|gb|AEM81832.1| Protein recA [Streptomyces violaceusniger Tu 4113]
Length = 379
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 180/328 (54%), Positives = 249/328 (75%), Gaps = 6/328 (1%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLG-RSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
+ ++ AL AL QI FGKG++M +G R P + V+ TGS ALD+ALG GGLP+GRV
Sbjct: 4 TDREKALDAALAQIERQFGKGAVMRMGDRPNEP--IEVIPTGSTALDVALGVGGLPRGRV 61
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
VE+YGPE+SGKTTL LH +A AQR GG F+DAEHALDP A+ +GV T++L+L+QPD
Sbjct: 62 VEVYGPESSGKTTLTLHAVANAQRAGGTVAFVDAEHALDPDYAQKLGVDTDSLILSQPDN 121
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL +VD L+RSG++D++V+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ +
Sbjct: 122 GEQALEIVDMLVRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITSA 181
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
L+ S+T IFINQ+R K+ FG P E T GG ALKFYASVR++I+RI +K G + +G
Sbjct: 182 LNQSKTTAIFINQLREKIGVM-FGSP-ETTTGGRALKFYASVRIDIRRIETLKDGTDAVG 239
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNF 299
++ VK+VKNK+APPFK A+F++ +G+GISRE +ID+ ++H F K+GA +TY D+
Sbjct: 240 NRTRVKVVKNKVAPPFKQAEFDILYGQGISREGGLIDMGVEHGFVRKSGAWYTYEGDQLG 299
Query: 300 RGKEAFKQFLVENESVREELVIKLREKL 327
+GKE + FL +N + E+ K++EKL
Sbjct: 300 QGKENARNFLKDNPDLANEIERKIKEKL 327
>gi|384085451|ref|ZP_09996626.1| recA protein [Acidithiobacillus thiooxidans ATCC 19377]
Length = 345
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/340 (53%), Positives = 248/340 (72%), Gaps = 7/340 (2%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
++ AL AL QI FGKG++M LG + + V STGS LD+ALG GGLP+GRVVE
Sbjct: 4 QRSKALSAALSQIDKQFGKGAVMRLGDHNAIKDIAVYSTGSLGLDLALGVGGLPRGRVVE 63
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL LH IA Q+ GG FIDAEHALDP A +GV ENLL++QPD GE
Sbjct: 64 IYGPESSGKTTLTLHAIASCQQAGGTAAFIDAEHALDPGYAHKLGVDLENLLVSQPDTGE 123
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L+RSG+VD++VVDSVAAL PK E++G+MGD+H+ +QARLMSQALRKL+ ++S
Sbjct: 124 QALEIADMLVRSGAVDLIVVDSVAALTPKAEIEGDMGDSHVGLQARLMSQALRKLTANIS 183
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ T++IFINQ+R K+ +G P E T GGNALKFYASVRL+I+RIG +KKG+E +G+
Sbjct: 184 RTNTLVIFINQIRMKIGVM-YGSP-ETTTGGNALKFYASVRLDIRRIGAIKKGDEVMGND 241
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+APPF+ A+F + +G+GISR SE++DL +K + K+GA ++Y +R +G
Sbjct: 242 TRVKVVKNKVAPPFREAEFAIYYGEGISRLSELVDLGVKFEIVEKSGAWYSYQGERIGQG 301
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDE 341
K+ +Q+L E+ +EL ++ +++ A TD+
Sbjct: 302 KDNARQYLKEH----QELATRIEQQVRAAAAGNPLAFTDD 337
>gi|114797171|ref|YP_761421.1| recA protein [Hyphomonas neptunium ATCC 15444]
gi|114737345|gb|ABI75470.1| recA protein [Hyphomonas neptunium ATCC 15444]
Length = 356
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/317 (57%), Positives = 240/317 (75%), Gaps = 4/317 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL I SFGKGS+M LG T + VSTGS LDIALG GGLPKGR++EI
Sbjct: 9 KQKALETALGNIERSFGKGSVMRLGDKKT-LDIEAVSTGSLGLDIALGIGGLPKGRIIEI 67
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
+GPE+SGKTTL+LH +AEAQ+ GG C FIDAEHALDP A +GV ++LL++QPD GEQ
Sbjct: 68 FGPESSGKTTLSLHCVAEAQKNGGVCAFIDAEHALDPVYASKLGVDLDDLLISQPDTGEQ 127
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VD+VV+DSVAAL P+ E++GEMGD +QARLMSQALRKL+ S+S
Sbjct: 128 ALEIADTLVRSGAVDLVVIDSVAALTPRAEIEGEMGDQLPGLQARLMSQALRKLTGSISK 187
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+ ++IFINQ+R K+ FG P E T GGNALKFY+SVRL+I+RIG +K EE IG+Q
Sbjct: 188 SKCMVIFINQIRMKIGVM-FGNP-ETTTGGNALKFYSSVRLDIRRIGQIKDREEVIGNQT 245
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGK 302
VK+VKNK+APPF+ +F++ +G+GIS+ E++DL +K K+G+ F+YN +R +G+
Sbjct: 246 RVKVVKNKVAPPFRQVEFDIIYGEGISKTGELVDLGVKANVVEKSGSWFSYNGERIGQGR 305
Query: 303 EAFKQFLVENESVREEL 319
E +QFL +N +V E+
Sbjct: 306 EKARQFLKDNPAVANEI 322
>gi|410630578|ref|ZP_11341266.1| recombination protein RecA [Glaciecola arctica BSs20135]
gi|410149807|dbj|GAC18133.1| recombination protein RecA [Glaciecola arctica BSs20135]
Length = 342
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 190/341 (55%), Positives = 244/341 (71%), Gaps = 4/341 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGSIM LG + T V +STGS LDIALG GGLP GR+VEI
Sbjct: 5 KTRALSAALGQIEKQFGKGSIMKLGDNKT-MDVETISTGSLGLDIALGAGGLPLGRIVEI 63
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIAEAQR G C FIDAEHALDP A+ +GV LL++QPD GEQ
Sbjct: 64 YGPESSGKTTLTLEVIAEAQRNGKVCAFIDAEHALDPIYAKKLGVDVNELLVSQPDTGEQ 123
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L RSG+VDV+VVDSVAAL PK E++G++GD+HM + AR+MSQA+RKL+ +L
Sbjct: 124 ALEICDMLTRSGAVDVIVVDSVAALTPKAEIEGDIGDSHMGLAARMMSQAMRKLTGNLKN 183
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK G+E +G++
Sbjct: 184 SNTMLIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAVKAGDEIVGNET 241
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGK 302
VK+VKNK+APPFK A+F++ +G+GI+ E+IDL + HK KAGA ++YN +R +GK
Sbjct: 242 RVKVVKNKIAPPFKQAEFQIMYGEGINSHGELIDLGVTHKMVEKAGAWYSYNGERIGQGK 301
Query: 303 EAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDS 343
+L E+ + +++ +LR+ L+ E ED+
Sbjct: 302 ANSIVYLKEHPEMAQDIDKRLRDLLLSKPVEADKTEKKEDA 342
>gi|1350557|sp|P48292.1|RECA2_MYXXA RecName: Full=Protein RecA 2; AltName: Full=Recombinase A 2
gi|848996|gb|AAC37001.1| recA2 [Myxococcus xanthus]
Length = 358
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 180/327 (55%), Positives = 249/327 (76%), Gaps = 6/327 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTP--RHVPVVSTGSFALDIALGTGGLPKGRV 60
+K+ A++ A+ + FGKGSIM LG P R V + TGS +LDIALG GG+PKGR+
Sbjct: 6 EKEKAIELAMSAVERQFGKGSIMRLGND-EPMMRDVQAIPTGSISLDIALGVGGVPKGRI 64
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+EI+GPE+SGKTTL LH++AEAQ++GG C ++DAEHALD A +GV+T++LLL+QPD
Sbjct: 65 IEIFGPESSGKTTLCLHIVAEAQKRGGICGYVDAEHALDVGYARKLGVRTDDLLLSQPDT 124
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + + L+RSG++DV+VVDSVAALVPK EL+GEMGDAHM +QARLMSQALRKL+ +
Sbjct: 125 GEQALEIAEMLVRSGAIDVLVVDSVAALVPKAELEGEMGDAHMGVQARLMSQALRKLTGT 184
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
++ SQT +IFINQ+R K+ FG P E T GGNALKFYAS RL+I+RIG +K G+ +G
Sbjct: 185 IAKSQTCVIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASQRLDIRRIGAIKNGDNVVG 242
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNF 299
S+ VK+VKNK+APPFK +F++ +G GISRE ++IDLA K+G+ F++N +R
Sbjct: 243 SRTRVKVVKNKVAPPFKEVEFDIMYGTGISREGDLIDLASNENIVEKSGSWFSFNGERIG 302
Query: 300 RGKEAFKQFLVENESVREELVIKLREK 326
+G+E K++L E+ + +++ ++ EK
Sbjct: 303 QGRENVKEYLREHPEIAKDIEGRVLEK 329
>gi|359419292|ref|ZP_09211250.1| protein RecA [Gordonia araii NBRC 100433]
gi|358244699|dbj|GAB09319.1| protein RecA [Gordonia araii NBRC 100433]
Length = 354
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/327 (55%), Positives = 246/327 (75%), Gaps = 4/327 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
++ AL AL QI ++GKGS+M LG T + + ++ TGS ALDIALG GGLP+GRVVEI
Sbjct: 8 REKALDLALAQIDKNYGKGSVMRLGEE-TRQPIEIIPTGSVALDIALGIGGLPRGRVVEI 66
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ALH +A AQ QGG FIDAEHALDP A +GV T+ LL++QPD GEQ
Sbjct: 67 YGPESSGKTTVALHAVANAQAQGGIAAFIDAEHALDPDYAAKLGVDTDALLVSQPDTGEQ 126
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D LIRSG++D++V+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ +LS
Sbjct: 127 ALEIADMLIRSGALDILVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTSALSN 186
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T IFINQ+R K+ FG P E T GG ALKFY+SVRL+++RI +K G + +G++
Sbjct: 187 SNTTAIFINQLREKIGVM-FGSP-ETTTGGKALKFYSSVRLDVRRIETLKDGTDAVGNRT 244
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRGK 302
VK+VKNK+APPFK A+F++ +G+GISRE +IDL + F K+G+ FTY D+ +GK
Sbjct: 245 RVKVVKNKVAPPFKQAEFDILYGEGISREGSLIDLGVNEGFIRKSGSWFTYEGDQLGQGK 304
Query: 303 EAFKQFLVENESVREELVIKLREKLVV 329
E + FL EN + +E+ K+++KL V
Sbjct: 305 ENARNFLKENPDIADEIEKKIKDKLGV 331
>gi|383639196|ref|ZP_09951602.1| recombinase A [Streptomyces chartreusis NRRL 12338]
Length = 374
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/330 (55%), Positives = 249/330 (75%), Gaps = 6/330 (1%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLG-RSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
+ ++ AL AL QI FGKG++M +G R+ P + V+ TGS ALD+ALG GGLP+GRV
Sbjct: 4 TDREKALDAALAQIERQFGKGAVMRMGDRTKEP--IEVIPTGSTALDVALGVGGLPRGRV 61
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
VEIYGPE+SGKTTL LH +A AQ+ GG F+DAEHALDP A+ +GV +NL+L+QPD
Sbjct: 62 VEIYGPESSGKTTLTLHAVANAQKAGGQVAFVDAEHALDPEYAKKLGVDIDNLILSQPDN 121
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL +VD L+RSG++D++V+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ +
Sbjct: 122 GEQALEIVDMLVRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITSA 181
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
L+ S+T IFINQ+R K+ FG P E T GG ALKFYASVR++I+RI +K G E +G
Sbjct: 182 LNQSKTTAIFINQLREKIGVM-FGSP-ETTTGGRALKFYASVRIDIRRIETLKDGTEAVG 239
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNF 299
++ K+VKNK+APPFK A+F++ +G+GISRE +ID+ ++H F KAGA +TY D+
Sbjct: 240 NRTRCKVVKNKVAPPFKQAEFDILYGQGISREGGLIDMGVEHGFVRKAGAWYTYEGDQLG 299
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVV 329
+GKE + FL +N + E+ K++EKL V
Sbjct: 300 QGKENARNFLKDNPDLANEIEKKIKEKLGV 329
>gi|114562240|ref|YP_749753.1| recombinase A [Shewanella frigidimarina NCIMB 400]
gi|122300464|sp|Q086A0.1|RECA_SHEFN RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|114333533|gb|ABI70915.1| recA protein [Shewanella frigidimarina NCIMB 400]
Length = 354
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/341 (54%), Positives = 239/341 (70%), Gaps = 4/341 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K+ AL L QI FGKGSIM LG T V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKEKALAAVLSQIEKQFGKGSIMKLGEDRT-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A+ +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLEVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV+VVDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALTRSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+R G +K G+E +G++
Sbjct: 185 QSNTLLIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRTGAIKDGDEVVGNE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK+VKNK+A PFK A+F++ +G+GI+R E++DL + HK KAGA ++Y +G
Sbjct: 243 TRVKVVKNKIAAPFKQAEFQILYGQGINRTGELVDLGVAHKLVDKAGAWYSYKGEKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDED 342
+ +FL EN + E+ LR L+ + T+ D
Sbjct: 303 RANAGKFLTENPVIASEINTTLRAMLLNGGANSSDSKTESD 343
>gi|302558031|ref|ZP_07310373.1| RecA protein [Streptomyces griseoflavus Tu4000]
gi|302475649|gb|EFL38742.1| RecA protein [Streptomyces griseoflavus Tu4000]
Length = 375
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/330 (55%), Positives = 250/330 (75%), Gaps = 6/330 (1%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLG-RSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
+ ++ AL AL QI FGKG++M +G RS+ P + V+ TGS ALD+ALG GGLP+GRV
Sbjct: 7 TDREKALDAALAQIERQFGKGAVMRMGERSMEP--IEVIPTGSTALDVALGVGGLPRGRV 64
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
VEIYGPE+SGKTTL LH +A AQ+ GG F+DAEHALDP A+ +GV +NL+L+QPD
Sbjct: 65 VEIYGPESSGKTTLTLHAVANAQKAGGQVAFVDAEHALDPEYAKKLGVDIDNLILSQPDN 124
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL +VD L+RSG++D++V+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ +
Sbjct: 125 GEQALEIVDMLVRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITSA 184
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
L+ S+T IFINQ+R K+ FG P E T GG ALKFYASVR++I+RI +K G E +G
Sbjct: 185 LNQSKTTAIFINQLREKIGVM-FGSP-ETTTGGRALKFYASVRIDIRRIETLKDGTEAVG 242
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNF 299
++ K+VKNK+APPFK A+F++ +G+GISRE +ID+ +++ F KAGA +TY D+
Sbjct: 243 NRTRCKVVKNKVAPPFKQAEFDILYGQGISREGGLIDMGVENGFVRKAGAWYTYEGDQLG 302
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVV 329
+GKE + FL +N + E+ K++EKL V
Sbjct: 303 QGKENARNFLKDNPDLANEIEKKIKEKLGV 332
>gi|224369826|ref|YP_002603990.1| recombinase A [Desulfobacterium autotrophicum HRM2]
gi|259563332|sp|C0QI90.1|RECA_DESAH RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|223692543|gb|ACN15826.1| RecA [Desulfobacterium autotrophicum HRM2]
Length = 347
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 179/337 (53%), Positives = 250/337 (74%), Gaps = 6/337 (1%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLG-RSVTPRHVPVVSTGSFALDIALGTGGLPKGR 59
+++KD A+Q A+ QI FGKGSIM LG R + + VP++STGS ALD ALG GG P+GR
Sbjct: 4 LTEKDKAIQTAMGQIERQFGKGSIMKLGAREI--QAVPIISTGSLALDKALGVGGFPRGR 61
Query: 60 VVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPD 119
V+EIYGPE+SGKTTLALH +AEAQRQGG FIDAEHALD + A +GV + LL++QPD
Sbjct: 62 VIEIYGPESSGKTTLALHAVAEAQRQGGIAAFIDAEHALDVAYARRLGVNCDELLVSQPD 121
Query: 120 CGEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSH 179
GEQAL +VD L+RSG+VD+++VDSVAALVP+ E++G+MGD+HM +QARLMSQALRKL+
Sbjct: 122 TGEQALEIVDMLVRSGAVDIIIVDSVAALVPRAEIEGDMGDSHMGLQARLMSQALRKLTA 181
Query: 180 SLSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETI 239
++ + T LIFINQ+R K+ +G P E T GGNALKFYASVR+ I++ +K GE +
Sbjct: 182 TIGKTHTTLIFINQIRMKIGVV-YGNP-ETTTGGNALKFYASVRIEIRKATAIKDGENIL 239
Query: 240 GSQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRN 298
G++ VK+VKNKLAPPFK+ +F+L +G+GIS+ E++D+ + K+GA ++Y+ +R
Sbjct: 240 GNRTKVKVVKNKLAPPFKSIEFDLMYGEGISKTGELLDMGVDMGIVDKSGAWYSYDGERI 299
Query: 299 FRGKEAFKQFLVENESVREELVIKLREKLVVDHKEPQ 335
+G++ K F +N + ++ ++RE L + P+
Sbjct: 300 GQGRQNAKVFFTDNPEIFNQIQARVREALGLSSPTPK 336
>gi|444433981|ref|ZP_21229110.1| protein RecA [Gordonia soli NBRC 108243]
gi|443885150|dbj|GAC70831.1| protein RecA [Gordonia soli NBRC 108243]
Length = 347
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 180/325 (55%), Positives = 247/325 (76%), Gaps = 4/325 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
++ AL AL QI +FGKGS+M LG T + + ++ TGS ALD+ALG GGLP+GR++E+
Sbjct: 8 REKALDLALAQIDKNFGKGSVMRLGEE-TRQPIEIIPTGSIALDVALGIGGLPRGRIIEV 66
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ALH +A AQ QGG FIDAEHALDP A +GV T+ LL++QPD GEQ
Sbjct: 67 YGPESSGKTTVALHAVANAQAQGGIAAFIDAEHALDPDYAARLGVDTDALLVSQPDTGEQ 126
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D LIRSG++D++V+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ LS
Sbjct: 127 ALEIADMLIRSGALDILVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTSGLSN 186
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+T IFINQ+R K+ FG P E T GG ALKFY+SVRL+++RI +K G + +G++
Sbjct: 187 SKTTAIFINQLREKIGVM-FGSP-ETTTGGKALKFYSSVRLDVRRIETLKDGTDAVGNRT 244
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRGK 302
VK+VKNK+APPFK A+F++ +G GIS+E +IDL + F K+G+ FTY D+ +GK
Sbjct: 245 RVKVVKNKVAPPFKQAEFDILYGLGISKEGSLIDLGVAEGFIRKSGSWFTYEGDQLGQGK 304
Query: 303 EAFKQFLVENESVREELVIKLREKL 327
E ++FL+EN +R+E+ K++EKL
Sbjct: 305 ENARKFLLENVDIRDEIEKKIKEKL 329
>gi|404420780|ref|ZP_11002513.1| recombinase A [Mycobacterium fortuitum subsp. fortuitum DSM 46621]
gi|42416873|gb|AAS16318.1| RecA [Mycobacterium fortuitum subsp. fortuitum DSM 46621]
gi|65306701|gb|AAY41903.1| RecA [Mycobacterium conceptionense]
gi|403659648|gb|EJZ14278.1| recombinase A [Mycobacterium fortuitum subsp. fortuitum DSM 46621]
Length = 351
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 179/325 (55%), Positives = 248/325 (76%), Gaps = 4/325 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
++ AL+ A+ QI +FGKGS+M LG V + + V+ TGS +LD+ALG GGLP+GRVVEI
Sbjct: 8 REKALELAMAQIDKNFGKGSVMRLGEEVR-QPISVIPTGSISLDVALGIGGLPRGRVVEI 66
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ALH +A AQ GG FIDAEHALDP A+ +GV T++LL++QPD GEQ
Sbjct: 67 YGPESSGKTTVALHAVANAQAAGGIAAFIDAEHALDPEYAKKLGVDTDSLLVSQPDTGEQ 126
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RSG++D++V+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ +L+
Sbjct: 127 ALEIADMLVRSGALDILVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTGALNN 186
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T IFINQ+R K+ FG P E T GG ALKFYASVRL+++RI +K G + +G++
Sbjct: 187 SGTTAIFINQLREKIGVM-FGSP-ETTTGGKALKFYASVRLDVRRIETLKDGTDAVGNRT 244
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK++PPFK A+F++ +G+GISRE +ID+ ++H F K+G+ FTY +GK
Sbjct: 245 RVKVVKNKVSPPFKQAEFDILYGQGISREGSLIDMGVEHGFIRKSGSWFTYEGEQLGQGK 304
Query: 303 EAFKQFLVENESVREELVIKLREKL 327
E ++FL+EN V E+ K++EKL
Sbjct: 305 ENARKFLLENVDVANEIEKKIKEKL 329
>gi|116872830|ref|YP_849611.1| recombinase A [Listeria welshimeri serovar 6b str. SLCC5334]
gi|38258436|sp|Q83TH3.1|RECA_LISWE RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|123463758|sp|A0AIK0.1|RECA_LISW6 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|30266001|gb|AAN15816.1| RecA [Listeria welshimeri]
gi|30266003|gb|AAN15817.1| RecA [Listeria welshimeri]
gi|55535654|gb|AAV52892.1| RecA [Listeria welshimeri]
gi|116741708|emb|CAK20832.1| RecA protein (Recombinase A) [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 348
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 175/331 (52%), Positives = 253/331 (76%), Gaps = 4/331 (1%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
M+ + AL QAL QI FGKGSIM LG + +++ +S+GS ALDIALG GG P+GR+
Sbjct: 1 MNDRQAALDQALKQIEKQFGKGSIMKLGEH-SDQNISTISSGSLALDIALGVGGYPRGRI 59
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+E+YGPE+SGKTT+ALH IAE Q QGG FIDAEHALDP+ A+ +GV + LLL+QPD
Sbjct: 60 IEVYGPESSGKTTVALHAIAEVQAQGGTAAFIDAEHALDPAYAKNLGVNIDELLLSQPDT 119
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + + L+RSG+VD++V+DSVAALVP+ E++GEMGDAH+ +QARLMSQALRKLS +
Sbjct: 120 GEQALEIAEALVRSGAVDMLVIDSVAALVPRAEIEGEMGDAHVGLQARLMSQALRKLSGA 179
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
++ S+TI IFINQ+R K+ FG P E+T GG ALKFY++VRL ++R +K+G + +G
Sbjct: 180 INKSKTIAIFINQIREKVGVM-FGNP-EITPGGRALKFYSTVRLEVRRAEQLKQGTDVMG 237
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNF 299
++ +K+VKNK+APPF+ A+ ++ +G+GISRE E++D+A + +K+G+ ++Y +R
Sbjct: 238 NKTKIKVVKNKVAPPFRIAEVDIMYGEGISREGELVDMAAEVDVINKSGSWYSYKEERIG 297
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVD 330
+G+E KQ+L E+ +R+E+ ++RE+ +D
Sbjct: 298 QGRENAKQYLKEHTDIRDEISQRVREEYEID 328
>gi|294815485|ref|ZP_06774128.1| Protein recA [Streptomyces clavuligerus ATCC 27064]
gi|294328084|gb|EFG09727.1| Protein recA [Streptomyces clavuligerus ATCC 27064]
Length = 417
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 180/330 (54%), Positives = 247/330 (74%), Gaps = 6/330 (1%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLG-RSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
+ ++ AL AL QI FGKG++M +G R+ P + ++ TGS ALD+ALG GGLP+GRV
Sbjct: 47 TDREKALDAALAQIERQFGKGAVMRMGDRTQEP--IEIIPTGSTALDVALGVGGLPRGRV 104
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
VEIYGPE+SGKTTL LH +A AQR GG F+DAEHALDP A +GV +NL+L+QPD
Sbjct: 105 VEIYGPESSGKTTLTLHAVANAQRAGGQVAFVDAEHALDPEYARKLGVDIDNLILSQPDN 164
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL +VD L+RSG++D++V+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ +
Sbjct: 165 GEQALEIVDMLVRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITSA 224
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
L+ S+T IFINQ+R K+ FG P E T GG ALKFYASVR++I+RI +K G E +G
Sbjct: 225 LNQSKTTAIFINQLREKIGVM-FGSP-ETTTGGRALKFYASVRIDIRRIETLKDGTEAVG 282
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF- 299
++ K+VKNK+APPFK A+F++ +G+GISRE +ID+ ++H F KAGA +TY
Sbjct: 283 NRTRCKVVKNKVAPPFKQAEFDILYGQGISREGGLIDMGVEHGFVRKAGAWYTYESGQLG 342
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVV 329
+GKE + FL +N + +E+ K+++KL V
Sbjct: 343 QGKENARNFLKDNPDLADEIEKKIKDKLGV 372
>gi|118442927|ref|YP_878196.1| recombinase A [Clostridium novyi NT]
gi|166220640|sp|A0Q0P4.1|RECA_CLONN RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|118133383|gb|ABK60427.1| recA protein [Clostridium novyi NT]
Length = 350
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/345 (53%), Positives = 255/345 (73%), Gaps = 8/345 (2%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
ALQ A+ QI FGKGS+M LG +V +STGS +LDIALG GG+P+GR++EI+GP
Sbjct: 8 ALQAAITQIEKQFGKGSVMKLGEEHV-LNVEAISTGSLSLDIALGIGGIPRGRIIEIFGP 66
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTT+ALH+IAEAQ+ GG FIDAEHALDP A+ +GV +NL+++QPD GEQAL
Sbjct: 67 ESSGKTTVALHIIAEAQKSGGTAAFIDAEHALDPVYAKALGVDIDNLIVSQPDTGEQALE 126
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ + L+RSG++DV+VVDSVAALVPK E++GEMGD+H+ +QARLMSQALRKL+ S++ S+
Sbjct: 127 ICEALVRSGAIDVIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTGSINKSKC 186
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
IFINQ+R K+ FG P E T GG ALKFY+SVRL++++I +K+G+E +GS+ VK
Sbjct: 187 ATIFINQLREKVGIM-FGNP-ETTPGGRALKFYSSVRLDVRKIETIKQGDEFLGSRTRVK 244
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYND-RNFRGKEAF 305
+VKNK+APPFK A+F++ +G GIS E ++D+ + ++ K+G+ F+YND R +G+E
Sbjct: 245 VVKNKVAPPFKQAEFDIMYGTGISFEGNVLDVGVDNEIIQKSGSWFSYNDTRLGQGRENV 304
Query: 306 KQFLVENESVREELVIKLREKLVVDHKEPQ----TAVTDEDSTEE 346
KQFL EN S+ E+ K+REK + + T DE S EE
Sbjct: 305 KQFLRENPSILLEVENKIREKHNLKTRNTADSKVTGAKDEKSKEE 349
>gi|239991215|ref|ZP_04711879.1| recombinase A [Streptomyces roseosporus NRRL 11379]
gi|291448212|ref|ZP_06587602.1| recombinase A [Streptomyces roseosporus NRRL 15998]
gi|291351159|gb|EFE78063.1| recombinase A [Streptomyces roseosporus NRRL 15998]
Length = 375
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 184/330 (55%), Positives = 248/330 (75%), Gaps = 6/330 (1%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLG-RSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
+ ++ AL AL QI FGKG++M LG R P + V+ TGS ALD+ALG GGLP+GRV
Sbjct: 7 TDREKALDAALAQIERQFGKGAVMRLGERPNEP--IEVIPTGSTALDVALGVGGLPRGRV 64
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
VE+YGPE+SGKTTL LH +A AQRQGG FIDAEHALDP A+ +GV ++L+L+QPD
Sbjct: 65 VEVYGPESSGKTTLTLHAVANAQRQGGSVAFIDAEHALDPEYAKKLGVDIDSLILSQPDN 124
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + D L+RSG++D++V+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ +
Sbjct: 125 GEQALEITDMLVRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITSA 184
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
L+ S+T IFINQ+R K+ FG P E T GG ALKFYASVRL+I+RI +K G + +G
Sbjct: 185 LNQSKTTAIFINQLREKIGVM-FGSP-ETTTGGRALKFYASVRLDIRRIETLKDGTDAVG 242
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNF 299
++ VK+VKNK+APPFK A+F++ +G+GISRE +ID+ ++H F KAGA +TY D+
Sbjct: 243 NRTRVKVVKNKVAPPFKQAEFDILYGQGISREGGLIDMGVEHGFVRKAGAWYTYEGDQLG 302
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVV 329
+GKE + FL +N + E+ K+ EKL V
Sbjct: 303 QGKENARNFLKDNPDLANEIEKKILEKLGV 332
>gi|238924585|ref|YP_002938101.1| RecA protein [Eubacterium rectale ATCC 33656]
gi|238876260|gb|ACR75967.1| RecA protein [Eubacterium rectale ATCC 33656]
Length = 350
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 184/346 (53%), Positives = 252/346 (72%), Gaps = 6/346 (1%)
Query: 1 MSKKDL--ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKG 58
M+K+D AL A+ QI +GKGS+M LG + +V V TGS +LDIALG GGLPKG
Sbjct: 1 MAKEDKLKALDAAIAQIEKQYGKGSVMKLGDNSANMNVETVPTGSLSLDIALGLGGLPKG 60
Query: 59 RVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQP 118
R++E+YGPE+SGKTT+ALH +AE Q++GG FIDAEHALDP A IGV +NL ++QP
Sbjct: 61 RIIEVYGPESSGKTTVALHCVAEVQKRGGIAGFIDAEHALDPVYARNIGVDIDNLYISQP 120
Query: 119 DCGEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLS 178
DCGEQAL + +T++RSG+VD+VVVDSVAALVPK E+DG+MGD+H+ +QARLMSQALRKL+
Sbjct: 121 DCGEQALEITETMVRSGAVDIVVVDSVAALVPKAEIDGDMGDSHVGLQARLMSQALRKLT 180
Query: 179 HSLSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEET 238
+S S I+IFINQ+R K+ FG P E T GG ALKFY+SVRL+++R +K+G E
Sbjct: 181 AVISKSNCIVIFINQLREKVGVM-FGNP-ETTTGGRALKFYSSVRLDVRRTESLKQGGEI 238
Query: 239 IGSQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDR 297
+G+ + VK+VKNK+APPF+ A+F++ FG+GISRE +++DLA+ +K+GA + Y D+
Sbjct: 239 VGNHVRVKVVKNKIAPPFREAEFDIMFGQGISREGDVLDLAVNAGIVNKSGAWYAYEGDK 298
Query: 298 NFRGKEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDS 343
+G+E K ++ EN + + L K+R+ E + A EDS
Sbjct: 299 IGQGRENAKTYIHENPAFFDMLEAKVRD-FYFTQPEDEDAAVQEDS 343
>gi|400293076|ref|ZP_10794961.1| RecA protein [Actinomyces naeslundii str. Howell 279]
gi|399901782|gb|EJN84652.1| RecA protein [Actinomyces naeslundii str. Howell 279]
Length = 413
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 179/318 (56%), Positives = 240/318 (75%), Gaps = 4/318 (1%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL AL QI +FGKGS+M LG P V V+ TGS ALD+ALG GGLP+GR++E+YGP
Sbjct: 13 ALATALAQIDKNFGKGSVMRLGDDTRP-PVSVIPTGSVALDVALGVGGLPRGRIIEVYGP 71
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTT+ALH +A AQR GG FIDAEHALDP A+ +GV +NLL++QPD GEQAL
Sbjct: 72 ESSGKTTVALHAVASAQRAGGNAAFIDAEHALDPVYAKALGVDIDNLLVSQPDTGEQALE 131
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ D L+RSG +D++V+DSVAALVPK E++GEMGD+H+ +QARLMSQALRK++ +LS + T
Sbjct: 132 ITDMLVRSGGLDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITGALSSTGT 191
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
IFINQ+R K+ F FG P E T GG ALKFYASVRL+++RIG +K G++ +G++ VK
Sbjct: 192 TAIFINQLREKIGVF-FGNP-ETTTGGKALKFYASVRLDVRRIGGLKDGDQPVGNRTRVK 249
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGKEAF 305
+VKNK+APPFK A+F++ +G+GISRE ++DL + + K+GA FTY D+ +GKE
Sbjct: 250 VVKNKMAPPFKQAEFDILYGQGISREGSLLDLGVDNGVVRKSGAWFTYGEDQLGQGKENA 309
Query: 306 KQFLVENESVREELVIKL 323
+ FL +N + E+ K+
Sbjct: 310 RNFLKDNPQLAAEIEEKI 327
>gi|326773688|ref|ZP_08232971.1| recA protein [Actinomyces viscosus C505]
gi|326636918|gb|EGE37821.1| recA protein [Actinomyces viscosus C505]
Length = 413
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/318 (56%), Positives = 240/318 (75%), Gaps = 4/318 (1%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL AL QI SFGKGS+M LG P V V+ TGS ALD+ALG GGLP+GR+VE+YGP
Sbjct: 13 ALATALAQIDKSFGKGSVMRLGDESRP-PVSVIPTGSVALDVALGVGGLPRGRIVEVYGP 71
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTT+ALH +A AQR GG FIDAEHALDP A+ +GV +NLL++QPD GEQAL
Sbjct: 72 ESSGKTTVALHAVASAQRAGGNAAFIDAEHALDPVYAKALGVDIDNLLVSQPDTGEQALE 131
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ D L+RSG +D++V+DSVAALVPK E++GEMGD+H+ +QARLMSQALRK++ +LS + T
Sbjct: 132 ITDMLVRSGGLDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITGALSSTGT 191
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
IFINQ+R K+ F FG P E T GG ALKFYASVRL+++RIG +K G++ +G++ VK
Sbjct: 192 TAIFINQLREKIGVF-FGNP-ETTTGGKALKFYASVRLDVRRIGGLKDGDQPVGNRTRVK 249
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGKEAF 305
+VKNK+APPFK A+F++ +G+GISRE ++DL + + K+GA FTY D+ +GKE
Sbjct: 250 VVKNKMAPPFKQAEFDILYGQGISREGSLLDLGVDNGVVRKSGAWFTYGEDQLGQGKENA 309
Query: 306 KQFLVENESVREELVIKL 323
+ FL +N + E+ K+
Sbjct: 310 RNFLKDNPQLAAEIEEKI 327
>gi|383784750|ref|YP_005469320.1| recombinase A [Leptospirillum ferrooxidans C2-3]
gi|383083663|dbj|BAM07190.1| RecA protein [Leptospirillum ferrooxidans C2-3]
Length = 357
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 184/322 (57%), Positives = 241/322 (74%), Gaps = 3/322 (0%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
+L+ AL QI FGKGSIM LG+ VP + TGS +LD+ALG GG P+GRVVEI+GP
Sbjct: 12 SLELALSQIEKQFGKGSIMRLGKDQPVVVVPAIPTGSLSLDLALGIGGYPRGRVVEIFGP 71
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTTL L IAE ++GG FIDAEHALD S A +GVKTE+LL++QPD GEQAL
Sbjct: 72 ESSGKTTLTLQAIAEVHKRGGIAAFIDAEHALDISYARKLGVKTEDLLISQPDTGEQALE 131
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ +TL+RSGS+D+VVVDSVAALVPK EL+GEMGD+HM +QARLMSQALRKL+ S+S S T
Sbjct: 132 IAETLVRSGSIDLVVVDSVAALVPKAELEGEMGDSHMGLQARLMSQALRKLTSSISKSNT 191
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
+IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RI +K G++ +G+++ VK
Sbjct: 192 TVIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIEAIKDGDQVLGNRVRVK 249
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGKEAF 305
+VKNK+APPF+ A+F++ F +GISR E+IDL +++ KAG+ ++ +GKEA
Sbjct: 250 VVKNKMAPPFRQAEFDISFNEGISRIGELIDLGVENGVLEKAGSWYSLGTEKIGQGKEAV 309
Query: 306 KQFLVENESVREELVIKLREKL 327
K + + V ++ + LREKL
Sbjct: 310 KSYFKSHPDVALKVEVALREKL 331
>gi|171057188|ref|YP_001789537.1| recombinase A [Leptothrix cholodnii SP-6]
gi|170774633|gb|ACB32772.1| recA protein [Leptothrix cholodnii SP-6]
Length = 353
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 194/336 (57%), Positives = 247/336 (73%), Gaps = 3/336 (0%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
+K ALQ AL QI FGKGSIM LG + VVSTGS LD+ALG GGLP+GRVVE
Sbjct: 12 EKAKALQVALAQIEKQFGKGSIMRLGEGEVIEDIQVVSTGSLGLDVALGVGGLPRGRVVE 71
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA+ Q+ G C FIDAEHALD A+ +GV ++LL++QPD GE
Sbjct: 72 IYGPESSGKTTLTLQVIAQMQKLSGVCAFIDAEHALDIQYAQKLGVNLQDLLISQPDTGE 131
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL +VD L+RSGSVD++VVDSVAAL PK EL+GEMGD+ +QARLMSQALRKL+ ++
Sbjct: 132 QALEIVDALVRSGSVDLIVVDSVAALTPKAELEGEMGDSLPGLQARLMSQALRKLTSNIK 191
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +KKGEE IGS+
Sbjct: 192 KTNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKKGEEVIGSE 249
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK+VKNK++PPFKTA+F++ +G+GISRE EIID+ + K K+GA + YN +G
Sbjct: 250 TKVKVVKNKVSPPFKTAEFDILYGEGISREGEIIDMGVVAKVVDKSGAWYAYNGEKIGQG 309
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTA 337
K+ ++FL EN ++ E+ K+RE L + PQ
Sbjct: 310 KDNCREFLRENPALAHEIENKIRESLGISLLPPQNG 345
>gi|42416877|gb|AAS16320.1| RecA [Mycobacterium goodii]
Length = 349
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 178/325 (54%), Positives = 248/325 (76%), Gaps = 4/325 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
++ AL+ A+ QI +FGKGS+M LG V + + V+ TGS +LD+ALG GGLP+GRV+EI
Sbjct: 8 REKALELAMAQIDKNFGKGSVMRLGEEVR-QPISVIPTGSISLDVALGIGGLPRGRVIEI 66
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ALH +A AQ GG FIDAEHALDP A+ +GV T++LL++QPD GEQ
Sbjct: 67 YGPESSGKTTVALHAVANAQAAGGIAAFIDAEHALDPEYAKKLGVDTDSLLVSQPDTGEQ 126
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RSG++D++V+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ +L+
Sbjct: 127 ALEIADMLVRSGALDIIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTGALNN 186
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T IFINQ+R K+ FG P E T GG ALKFYASVRL+++RI +K G + +G++
Sbjct: 187 SGTTAIFINQLREKIGVM-FGSP-ETTTGGKALKFYASVRLDVRRIETLKDGTDAVGNRT 244
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK++PPFK A+F++ +G+GISRE +ID+ ++H F K+G+ FTY +GK
Sbjct: 245 RVKVVKNKVSPPFKQAEFDILYGQGISREGSLIDMGVEHGFIRKSGSWFTYEGEQLGQGK 304
Query: 303 EAFKQFLVENESVREELVIKLREKL 327
E ++FL+EN V E+ K++EKL
Sbjct: 305 ENARKFLLENVDVANEIEKKIKEKL 329
>gi|347439037|gb|AEO92286.1| RecA protein [Escherichia coli]
gi|347439039|gb|AEO92287.1| RecA protein [Escherichia coli]
gi|347439041|gb|AEO92288.1| RecA protein [Escherichia coli]
Length = 348
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 192/346 (55%), Positives = 244/346 (70%), Gaps = 5/346 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VEI
Sbjct: 2 KQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVEI 60
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A +GV +NLL +QPD GEQ
Sbjct: 61 YGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYARKLGVDIDNLLCSQPDTGEQ 120
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L RSG+VDV+VVDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ SL
Sbjct: 121 ALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGSLKQ 180
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+GE +GS+
Sbjct: 181 SNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKEGENVVGSET 238
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +K K KAGA ++Y +GK
Sbjct: 239 RVKVVKNKIAAPFKQAEFQILYGEGINFYGELVDLGVKEKLIEKAGAWYSYKGEKIGQGK 298
Query: 303 EAFKQFLVENESVREELVIKLREKLVVD-HKEPQTAVTDEDSTEET 347
+L +N +E+ K+RE L+ + + P +V D + ET
Sbjct: 299 ANATAWLKDNPETAKEIEKKVRELLLSNPNSTPDFSVDDSEGVAET 344
>gi|359798578|ref|ZP_09301149.1| recombinase A [Achromobacter arsenitoxydans SY8]
gi|359363400|gb|EHK65126.1| recombinase A [Achromobacter arsenitoxydans SY8]
Length = 353
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/333 (54%), Positives = 243/333 (72%), Gaps = 3/333 (0%)
Query: 14 QITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASGKTT 73
QI FGKGSIM G + + VVSTGS LDIALG GGLP+GRVVEIYGPE+SGKTT
Sbjct: 23 QIEKQFGKGSIMRYGDNEVSHDIQVVSTGSLGLDIALGVGGLPRGRVVEIYGPESSGKTT 82
Query: 74 LALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSLVDTLIR 133
L L V+AE Q+ GG C F+DAEHALD A +GV +LL++QPD GEQAL + D L+R
Sbjct: 83 LTLQVVAEMQKLGGTCAFVDAEHALDVQYASKLGVNLSDLLISQPDTGEQALEITDALVR 142
Query: 134 SGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFINQ 193
SGSVD++VVDSVAALVPK E++GEMGD+ +QARLMSQALRKL+ ++ + ++IFINQ
Sbjct: 143 SGSVDLIVVDSVAALVPKAEIEGEMGDSLPGLQARLMSQALRKLTATIKKTNCMVIFINQ 202
Query: 194 VRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVKIVKNKLA 253
+R K+ FG P E T GGNALKFYASVRL+I+RIG +KKG+E +G++ VK+VKNK+A
Sbjct: 203 IRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGSIKKGDEVVGNETRVKVVKNKVA 260
Query: 254 PPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGKEAFKQFLVEN 312
PPFK A+F++ +G GISRE EIIDL + K+GA ++YN +R +GK+ +++L E+
Sbjct: 261 PPFKQAEFDIMYGAGISREGEIIDLGVAANVVDKSGAWYSYNGNRIGQGKDNVREYLKEH 320
Query: 313 ESVREELVIKLREKLVVDHKEPQTAVTDEDSTE 345
+ + E+ ++RE + + + T ED+ E
Sbjct: 321 KELAIEIENRVRENQGIVSRAAEFVPTAEDTAE 353
>gi|423016513|ref|ZP_17007234.1| recombinase A [Achromobacter xylosoxidans AXX-A]
gi|338780455|gb|EGP44863.1| recombinase A [Achromobacter xylosoxidans AXX-A]
Length = 354
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/334 (54%), Positives = 244/334 (73%), Gaps = 3/334 (0%)
Query: 14 QITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASGKTT 73
QI FGKGSIM G + + VVSTGS LDIALG GGLP+GRVVEIYGPE+SGKTT
Sbjct: 23 QIEKQFGKGSIMRYGDNEVSHDIQVVSTGSLGLDIALGVGGLPRGRVVEIYGPESSGKTT 82
Query: 74 LALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSLVDTLIR 133
L L V+AE Q+ GG C F+DAEHALD A +GV +LL++QPD GEQAL + D L+R
Sbjct: 83 LTLQVVAEMQKIGGTCAFVDAEHALDVQYASKLGVNLADLLISQPDTGEQALEITDALVR 142
Query: 134 SGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFINQ 193
SGSVD++VVDSVAALVPK E++GEMGD+ +QARLMSQALRKL+ ++ + ++IFINQ
Sbjct: 143 SGSVDLIVVDSVAALVPKAEIEGEMGDSLPGLQARLMSQALRKLTATIKKTNCMVIFINQ 202
Query: 194 VRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVKIVKNKLA 253
+R K+ FG P E T GGNALKFYASVRL+I+RIG +KKG+E +G++ VK+VKNK+A
Sbjct: 203 IRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGSIKKGDEVVGNETRVKVVKNKVA 260
Query: 254 PPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGKEAFKQFLVEN 312
PPFK A+F++ +G GISRE EIIDL + K+GA ++YN +R +GK+ +++L E+
Sbjct: 261 PPFKQAEFDIMYGAGISREGEIIDLGVAANVVDKSGAWYSYNGNRIGQGKDNVREYLKEH 320
Query: 313 ESVREELVIKLREKLVVDHKEPQTAVTDEDSTEE 346
+ + E+ ++RE + + + T ED ++E
Sbjct: 321 KELAIEIENRVRENQGIVSRAAEFVPTAEDDSDE 354
>gi|22770580|gb|AAN06665.1|AF497237_1 DNA recombinase [Listeria monocytogenes]
Length = 348
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/354 (51%), Positives = 261/354 (73%), Gaps = 12/354 (3%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
M+ + AL QAL QI FGKGSIM LG + +++ +S+GS ALDIALG GG P+GR+
Sbjct: 1 MNDRQAALDQALKQIEKQFGKGSIMKLGEH-SDQNISTISSGSLALDIALGVGGYPRGRI 59
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+E+YGPE+SGKTT+ALH IAE Q QGG FIDAEHALDP+ A+ +GV + LLL+QPD
Sbjct: 60 IEVYGPESSGKTTVALHAIAEVQAQGGTAAFIDAEHALDPAYAKNLGVNIDELLLSQPDT 119
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + + L+RSG+VD++V+DSVAALVP+ E++GEMGDAH+ +QARLMSQALRKLS
Sbjct: 120 GEQALEIAEALVRSGAVDMLVIDSVAALVPRAEIEGEMGDAHVGLQARLMSQALRKLSGV 179
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
++ S+TI IFINQ+R K+ FG P E+T GG ALKFY++VRL ++R +K+G + +G
Sbjct: 180 INKSKTIAIFINQIREKVGVM-FGNP-EITPGGRALKFYSTVRLEVRRAEQLKQGTDVMG 237
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF- 299
++ +K+VKNK+APP + A+ ++ +G+GISRE E++D+A + +K+G+ ++Y +
Sbjct: 238 NKTKIKVVKNKVAPPXRIAEVDIMYGEGISREGELVDMAAEVDVINKSGSWYSYKEERIG 297
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVD--HKEPQTAVTDEDSTEETVSTI 351
+G+E KQ+L E+ +R+E+ ++RE+ +D +KEP D EET+S +
Sbjct: 298 QGRENAKQYLKEHTDIRDEISKRVREEYEIDGSNKEPL------DEGEETLSLL 345
>gi|187478799|ref|YP_786823.1| recombinase A [Bordetella avium 197N]
gi|123738620|sp|Q2KYE8.1|RECA_BORA1 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|115423385|emb|CAJ49919.1| RecA protein (recombinase A) [Bordetella avium 197N]
Length = 353
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 184/334 (55%), Positives = 245/334 (73%), Gaps = 3/334 (0%)
Query: 14 QITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASGKTT 73
QI FGKGSIM G + + VVSTGS LDIALG GGLP+GRVVEIYGPE+SGKTT
Sbjct: 22 QIEKQFGKGSIMRYGDNEVEHDIQVVSTGSLGLDIALGVGGLPRGRVVEIYGPESSGKTT 81
Query: 74 LALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSLVDTLIR 133
L L VIAE Q+ GG C F+DAEHALD A +GV +LL++QPD GEQAL + D L+R
Sbjct: 82 LTLQVIAEMQKVGGTCAFVDAEHALDVQYASKLGVNLGDLLISQPDTGEQALEITDALVR 141
Query: 134 SGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFINQ 193
SGSVD++V+DSVAALVPK E++GEMGDA +QARLMSQALRKL+ ++ + ++IFINQ
Sbjct: 142 SGSVDLIVIDSVAALVPKAEIEGEMGDALPGLQARLMSQALRKLTATIKRTNCMVIFINQ 201
Query: 194 VRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVKIVKNKLA 253
+R K+ FG P E T GGNALKFY+SVRL+I+RIG +KKG+E +G++ VK+VKNK+A
Sbjct: 202 IRMKIGVM-FGNP-ETTTGGNALKFYSSVRLDIRRIGSIKKGDEVVGNETRVKVVKNKVA 259
Query: 254 PPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGKEAFKQFLVEN 312
PPFK A+F++ +G GISRE EIIDL + K+GA ++Y+ +R +GK+ +++L EN
Sbjct: 260 PPFKQAEFDIMYGAGISREGEIIDLGVAANVIEKSGAWYSYSGNRIGQGKDNVREYLKEN 319
Query: 313 ESVREELVIKLREKLVVDHKEPQTAVTDEDSTEE 346
++ E+ K+R+ + + + A T E+S E+
Sbjct: 320 RAMAIEIENKIRDNQGIVARAAEFAPTAEESAED 353
>gi|42416895|gb|AAS16329.1| RecA [Mycobacterium porcinum]
Length = 351
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 179/325 (55%), Positives = 248/325 (76%), Gaps = 4/325 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
++ AL+ A+ QI +FGKGS+M LG V + + V+ TGS +LD+ALG GGLP+GRVVEI
Sbjct: 8 REKALELAMAQIDKNFGKGSVMRLGEEVR-QPISVIPTGSISLDVALGIGGLPRGRVVEI 66
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ALH +A AQ GG FIDAEHALDP A+ +GV T++LL++QPD GEQ
Sbjct: 67 YGPESSGKTTVALHAVANAQAAGGIAAFIDAEHALDPEYAKKLGVDTDSLLVSQPDTGEQ 126
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RSG++D++V+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ +L+
Sbjct: 127 ALEIADMLVRSGALDILVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTGALNN 186
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T IFINQ+R K+ FG P E T GG ALKFYASVRL+++RI +K G + +G++
Sbjct: 187 SGTTAIFINQLREKIGVM-FGSP-ETTTGGKALKFYASVRLDVRRIETLKDGTDAVGNRT 244
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK++PPFK A+F++ +G+GISRE +ID+ ++H F K+G+ FTY +GK
Sbjct: 245 RVKVVKNKVSPPFKQAEFDILYGQGISREGSLIDMGVEHGFIRKSGSWFTYEGEQLGQGK 304
Query: 303 EAFKQFLVENESVREELVIKLREKL 327
E ++FL+EN V E+ K++EKL
Sbjct: 305 ENARKFLLENVDVANEIEKKIKEKL 329
>gi|406036320|ref|ZP_11043684.1| recombinase A [Acinetobacter parvus DSM 16617 = CIP 108168]
Length = 348
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 184/344 (53%), Positives = 246/344 (71%), Gaps = 6/344 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K+ ALQ AL QI FGK ++M LG + T + V VSTGS LDIALG GGLPKGR++E
Sbjct: 4 NKNKALQAALSQIEKQFGKNTVMRLGDN-TVQAVEAVSTGSLTLDIALGIGGLPKGRIIE 62
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTT+ L IA+ Q+ GG C FIDAEHALDP A +GV +NLL++QPD GE
Sbjct: 63 IYGPESSGKTTMTLQAIAQCQKNGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDHGE 122
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L+RSG++D++VVDSVAAL PK E++GEMGD+HM +QARLMSQALRK++ +
Sbjct: 123 QALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAK 182
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+G+E +GS+
Sbjct: 183 RSNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGQVKEGDEIVGSE 240
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK+VKNK+APPF+ A F++ +GKG ++ E++DLA++ + KAGA ++Y +G
Sbjct: 241 TRVKVVKNKMAPPFREAVFQIMYGKGTNQLGELVDLAVQQEIVQKAGAWYSYQGNKIGQG 300
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTE 345
K + EN + +E+ +RE+L+ K A ED+ E
Sbjct: 301 KNNVIRHFEENPQMAQEIEKLIREQLLT--KNNNEAAQTEDAEE 342
>gi|42416871|gb|AAS16317.1| RecA [Mycobacterium mageritense DSM 44476]
Length = 349
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 179/325 (55%), Positives = 248/325 (76%), Gaps = 4/325 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
++ AL+ A+ QI +FGKGS+M LG V + + V+ TGS +LD+ALG GGLP+GRVVEI
Sbjct: 8 REKALELAMAQIDKNFGKGSVMRLGEEVR-QPISVIPTGSISLDVALGIGGLPRGRVVEI 66
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ALH +A AQ GG FIDAEHALDP A+ +GV T++LL++QPD GEQ
Sbjct: 67 YGPESSGKTTVALHAVANAQAAGGIAAFIDAEHALDPEYAKKLGVDTDSLLVSQPDTGEQ 126
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RSG++D++V+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ +L+
Sbjct: 127 ALEIADMLVRSGALDILVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTGALNN 186
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T IFINQ+R K+ FG P E T GG ALKFYASVRL+++RI +K G + +G++
Sbjct: 187 SGTTAIFINQLREKIGVM-FGSP-ETTTGGKALKFYASVRLDVRRIETLKDGTDAVGNRT 244
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK++PPFK A+F++ +G+GISRE +ID+ ++H F K+G+ FTY +GK
Sbjct: 245 RVKVVKNKVSPPFKQAEFDILYGQGISREGSLIDMGVEHGFIRKSGSWFTYEGEQLGQGK 304
Query: 303 EAFKQFLVENESVREELVIKLREKL 327
E ++FL+EN V E+ K++EKL
Sbjct: 305 ENARKFLLENVDVANEIEKKIKEKL 329
>gi|333899523|ref|YP_004473396.1| protein recA [Pseudomonas fulva 12-X]
gi|333114788|gb|AEF21302.1| Protein recA [Pseudomonas fulva 12-X]
Length = 349
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 179/328 (54%), Positives = 241/328 (73%), Gaps = 4/328 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKG++M +G + +P +STGS LDIALG GGLPKGR+VE
Sbjct: 4 NKKRALAAALGQIEKQFGKGAVMRMGDH-DRQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIAEAQ+ G C F+DAEHALDP A +GV ++LL++QPD GE
Sbjct: 63 IYGPESSGKTTLTLQVIAEAQKAGATCAFVDAEHALDPDYAGKLGVNVDDLLVSQPDTGE 122
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L+RS ++DV++VDSVAALVPK E++GEMGD H+ +QARLMSQALRK++ ++
Sbjct: 123 QALEITDMLVRSNAIDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+R G VK+G+E +GS+
Sbjct: 183 NANCLVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSE 240
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK+VKNK++PPF+ A+F++ +GKGI R EIIDL ++ K+GA ++Y +G
Sbjct: 241 TRVKVVKNKVSPPFRQAEFQILYGKGIYRNGEIIDLGVQQGLVEKSGAWYSYKGNKIGQG 300
Query: 302 KEAFKQFLVENESVREELVIKLREKLVV 329
K +FL +N+ V E+ ++R+KL+V
Sbjct: 301 KANAAKFLEDNQEVAREIEGQIRDKLLV 328
>gi|326443836|ref|ZP_08218570.1| recombinase A [Streptomyces clavuligerus ATCC 27064]
Length = 374
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 180/330 (54%), Positives = 247/330 (74%), Gaps = 6/330 (1%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLG-RSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
+ ++ AL AL QI FGKG++M +G R+ P + ++ TGS ALD+ALG GGLP+GRV
Sbjct: 4 TDREKALDAALAQIERQFGKGAVMRMGDRTQEP--IEIIPTGSTALDVALGVGGLPRGRV 61
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
VEIYGPE+SGKTTL LH +A AQR GG F+DAEHALDP A +GV +NL+L+QPD
Sbjct: 62 VEIYGPESSGKTTLTLHAVANAQRAGGQVAFVDAEHALDPEYARKLGVDIDNLILSQPDN 121
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL +VD L+RSG++D++V+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ +
Sbjct: 122 GEQALEIVDMLVRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITSA 181
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
L+ S+T IFINQ+R K+ FG P E T GG ALKFYASVR++I+RI +K G E +G
Sbjct: 182 LNQSKTTAIFINQLREKIGVM-FGSP-ETTTGGRALKFYASVRIDIRRIETLKDGTEAVG 239
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF- 299
++ K+VKNK+APPFK A+F++ +G+GISRE +ID+ ++H F KAGA +TY
Sbjct: 240 NRTRCKVVKNKVAPPFKQAEFDILYGQGISREGGLIDMGVEHGFVRKAGAWYTYESGQLG 299
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVV 329
+GKE + FL +N + +E+ K+++KL V
Sbjct: 300 QGKENARNFLKDNPDLADEIEKKIKDKLGV 329
>gi|108799114|ref|YP_639311.1| recombinase A [Mycobacterium sp. MCS]
gi|119868229|ref|YP_938181.1| recombinase A [Mycobacterium sp. KMS]
gi|126434720|ref|YP_001070411.1| recombinase A [Mycobacterium sp. JLS]
gi|122977082|sp|Q1BA29.1|RECA_MYCSS RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|189039599|sp|A3PYE3.1|RECA_MYCSJ RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|189039600|sp|A1UEY3.1|RECA_MYCSK RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|108769533|gb|ABG08255.1| recA protein [Mycobacterium sp. MCS]
gi|119694318|gb|ABL91391.1| recA protein [Mycobacterium sp. KMS]
gi|126234520|gb|ABN97920.1| recA protein [Mycobacterium sp. JLS]
Length = 347
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/327 (55%), Positives = 247/327 (75%), Gaps = 4/327 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
++ AL+ AL QI S GKGS+M LG V + V+ TGS ALD+ALG GGLP+GRV+EI
Sbjct: 8 REKALELALAQIEKSHGKGSVMRLGDEVRA-PISVIPTGSIALDVALGIGGLPRGRVIEI 66
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ALH +A AQ GG FIDAEHALDP A+ +GV T++LL++QPD GEQ
Sbjct: 67 YGPESSGKTTVALHAVANAQAAGGIAAFIDAEHALDPDYAKKLGVDTDSLLVSQPDTGEQ 126
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D LIRSG++D++V+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ +LS
Sbjct: 127 ALEIADMLIRSGALDILVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITGALSN 186
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T IFINQ+R K+ FG P E T GG ALKFYASVR++++RI +K G + +G++
Sbjct: 187 SGTTAIFINQLREKIGVM-FGSP-ETTTGGKALKFYASVRMDVRRIETLKDGTDAVGNRT 244
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VKIVKNK++PPFK A+F++ +GKGIS+E +ID+ ++H F K+G+ FTY +GK
Sbjct: 245 RVKIVKNKVSPPFKQAEFDILYGKGISKEGSLIDMGVEHGFIRKSGSWFTYEGEQLGQGK 304
Query: 303 EAFKQFLVENESVREELVIKLREKLVV 329
E ++FL+EN V E+ K++EKL +
Sbjct: 305 ENARKFLLENGDVANEIEKKIKEKLNI 331
>gi|429330738|ref|ZP_19211520.1| recombinase A [Pseudomonas putida CSV86]
gi|428764518|gb|EKX86651.1| recombinase A [Pseudomonas putida CSV86]
Length = 355
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/327 (55%), Positives = 239/327 (73%), Gaps = 4/327 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKG++M +G + +P +STGS LDIALG GGLPKGR+VE
Sbjct: 4 NKKRALAAALGQIERQFGKGAVMRMGDH-ERQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTT+ L VIA+AQ+ G C F+DAEHALDP A +GV ++LL++QPD GE
Sbjct: 63 IYGPESSGKTTMTLSVIAQAQKAGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGE 122
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L+RS +VDV++VDSVAALVPK E++GEMGD H+ +QARLMSQALRK++ ++
Sbjct: 123 QALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+R G VK+G+E +GS+
Sbjct: 183 NANCLVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSE 240
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VKIVKNK+APPF+ A+F++ +GKGI R EIIDL + H K+GA ++Y +G
Sbjct: 241 TRVKIVKNKVAPPFRQAEFQILYGKGIYRNGEIIDLGVLHGLLEKSGAWYSYQGSKIGQG 300
Query: 302 KEAFKQFLVENESVREELVIKLREKLV 328
K +FL EN + E L ++REKL+
Sbjct: 301 KANSAKFLAENPEIAETLEKQIREKLL 327
>gi|395777268|ref|ZP_10457783.1| recombinase A [Streptomyces acidiscabies 84-104]
Length = 378
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/330 (55%), Positives = 248/330 (75%), Gaps = 6/330 (1%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLG-RSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
+ ++ AL AL QI FGKG++M +G R P + V+ TGS ALD+ALG GG+P+GRV
Sbjct: 4 TDREKALDAALAQIERQFGKGAVMRMGERPNEP--IEVIPTGSTALDVALGVGGIPRGRV 61
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
VE+YGPE+SGKTTL LH +A AQR GG FIDAEHALDP A +GV +NL+L+QPD
Sbjct: 62 VEVYGPESSGKTTLTLHAVANAQRAGGQVAFIDAEHALDPEYARKLGVDIDNLILSQPDN 121
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL +VD L+RSG++D++V+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ +
Sbjct: 122 GEQALEIVDMLVRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITSA 181
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
L+ S+T IFINQ+R K+ FG P E T GG ALKFYASVRL+I+RI +K G E +G
Sbjct: 182 LNQSKTTAIFINQLREKIGVM-FGSP-ETTTGGRALKFYASVRLDIRRIETLKDGTEAVG 239
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNF 299
++ VK+VKNK+APPFK A+F++ +G GISRE +ID+ +++ F KAGA +TY D+
Sbjct: 240 NRTRVKVVKNKVAPPFKQAEFDILYGHGISREGGLIDMGVENGFVRKAGAWYTYEGDQLG 299
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVV 329
+GKE + FL +N + +E+ K++EKL V
Sbjct: 300 QGKENARNFLKDNPDLADEIEKKIKEKLGV 329
>gi|429212390|ref|ZP_19203555.1| recombinase A [Pseudomonas sp. M1]
gi|428156872|gb|EKX03420.1| recombinase A [Pseudomonas sp. M1]
Length = 353
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/333 (54%), Positives = 241/333 (72%), Gaps = 4/333 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKG++M +G + +P +STGS LDIALG GGLPKGR+VE
Sbjct: 4 NKKRALAAALGQIERQFGKGAVMRMGDH-ERQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIAEAQRQG C F+DAEHALDP A +GV ++LL++QPD GE
Sbjct: 63 IYGPESSGKTTLTLSVIAEAQRQGATCAFVDAEHALDPDYAGKLGVNVDDLLVSQPDTGE 122
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L+RS +VDV++VDSVAALVPK E++GEMGDAH+ +QARLMSQALRK++ ++
Sbjct: 123 QALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDAHVGLQARLMSQALRKITGNIK 182
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+R G VK+G+E +GS+
Sbjct: 183 NANCLVIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSE 240
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK+VKNK+APPF+ A+F++ +GKGI R EIIDL ++ K+GA ++Y +G
Sbjct: 241 TRVKVVKNKVAPPFRQAEFQILYGKGIYRTGEIIDLGVQLGLVEKSGAWYSYQGSKIGQG 300
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEP 334
K ++L EN + L +RE+L+ + P
Sbjct: 301 KANAAKYLEENAEICAVLDKAIREQLLNNQPAP 333
>gi|409393634|ref|ZP_11244934.1| recombinase A [Pseudomonas sp. Chol1]
gi|409393772|ref|ZP_11245059.1| recombinase A [Pseudomonas sp. Chol1]
gi|409121703|gb|EKM97768.1| recombinase A [Pseudomonas sp. Chol1]
gi|409121776|gb|EKM97838.1| recombinase A [Pseudomonas sp. Chol1]
Length = 352
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/328 (55%), Positives = 240/328 (73%), Gaps = 4/328 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKG++M +G + +P +STGS LDIALG GGLPKGR+VE
Sbjct: 4 NKKRALAAALGQIEKQFGKGAVMRMGDH-DRQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIAEAQ+ G C F+DAEHALDP A +GV ++LL++QPD GE
Sbjct: 63 IYGPESSGKTTLTLSVIAEAQKMGATCAFVDAEHALDPDYAGKLGVNVDDLLVSQPDTGE 122
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L+RS +VDV++VDSVAALVPK E++GEMGDAH+ +QARLMSQALRK++ ++
Sbjct: 123 QALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDAHVGLQARLMSQALRKITGNIK 182
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+R G VK+G+E +GS+
Sbjct: 183 NANCLVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSE 240
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK+VKNK+APPF+ A+F++ +GKGI R EIIDL ++ K+GA + Y +G
Sbjct: 241 TRVKVVKNKVAPPFRQAEFQILYGKGIYRNGEIIDLGVQQGLVEKSGAWYAYKGNKIGQG 300
Query: 302 KEAFKQFLVENESVREELVIKLREKLVV 329
K ++L +N V E+ ++R+KL+V
Sbjct: 301 KANAAKYLEDNPEVGREIEQQIRDKLLV 328
>gi|399524213|ref|ZP_10764781.1| RecA protein [Atopobium sp. ICM58]
gi|398374655|gb|EJN52233.1| RecA protein [Atopobium sp. ICM58]
Length = 363
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/341 (53%), Positives = 246/341 (72%), Gaps = 5/341 (1%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVV 61
+ ++ AL+ AL QI FGKGS+M LG P V V+ TGS ALD+ALG GGLP+GRV+
Sbjct: 14 NDRNKALEVALSQIDKQFGKGSVMRLGDDNRP-PVQVIPTGSLALDVALGIGGLPRGRVI 72
Query: 62 EIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCG 121
E+YGPE+SGKTT+ALH +A AQ+ GG FIDAEHALDP A +GV T++LL++QPD G
Sbjct: 73 EVYGPESSGKTTVALHAVANAQKAGGNAAFIDAEHALDPVYARALGVDTDSLLVSQPDTG 132
Query: 122 EQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSL 181
EQAL + D LIRSG +D++V+DSVAALVPK E++GEMGD+H+ +QARLMSQALRK++ +L
Sbjct: 133 EQALEIADMLIRSGGIDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITGAL 192
Query: 182 SLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGS 241
S + T IFINQ+R K+ F FG P E T GG ALKFYASVR++++RI +K+ +G+
Sbjct: 193 SATGTTAIFINQLREKIGVF-FGSP-ETTTGGKALKFYASVRIDVRRIETLKEAGSPVGN 250
Query: 242 QIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-R 300
+ K+VKNK+APPFK A+F++ +GKGISRE IID+ ++ K+G+ FTY D +
Sbjct: 251 RTRAKVVKNKMAPPFKQAEFDIVYGKGISREGSIIDMGVEAGIVRKSGSWFTYGDDQLGQ 310
Query: 301 GKEAFKQFLVENESVREELVIKLREKL-VVDHKEPQTAVTD 340
GKE +QFLV+N + E+ K+ L + D E +D
Sbjct: 311 GKENVRQFLVDNPELANEIENKILVALGITDAPEADKGASD 351
>gi|329922220|ref|ZP_08277937.1| RecA protein [Paenibacillus sp. HGF5]
gi|328942333|gb|EGG38602.1| RecA protein [Paenibacillus sp. HGF5]
Length = 356
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/326 (55%), Positives = 244/326 (74%), Gaps = 4/326 (1%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
+S + AL+ AL QI FGKGSIM LG S T V +V +GS ALDIALGTGGLP+GR+
Sbjct: 4 LSDRRAALEMALRQIEKQFGKGSIMKLGES-THMQVEIVPSGSLALDIALGTGGLPRGRI 62
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+E+YGPE+SGKTT+ALH IAE Q+ GG FIDAEHALDPS A +GV + LLL+QPD
Sbjct: 63 IEVYGPESSGKTTVALHAIAEVQKAGGQAAFIDAEHALDPSYANKLGVNIDELLLSQPDT 122
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + + L+RSG+VDV+V+DSVAALVPK E++G+MGD+H+ +QARLMSQALRKLS +
Sbjct: 123 GEQALEIAEALVRSGAVDVIVIDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKLSGA 182
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
++ S+TI IFINQ+R K+ FG P E T GG ALKFY++VRL+++RI +K G + +G
Sbjct: 183 INKSKTIAIFINQLREKVGVM-FGNP-ETTPGGRALKFYSTVRLDVRRIESIKMGNDVVG 240
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNF 299
++ +K+VKNK+APPFK A+ ++ +G+GISRE +ID+ + K+GA ++Y DR
Sbjct: 241 NRTRIKVVKNKVAPPFKQAELDIMYGEGISREGSLIDIGTELDIVDKSGAWYSYAGDRLG 300
Query: 300 RGKEAFKQFLVENESVREELVIKLRE 325
+G+E KQFL EN + + K+RE
Sbjct: 301 QGRENAKQFLKENPEIASVIENKIRE 326
>gi|326203615|ref|ZP_08193479.1| recA protein [Clostridium papyrosolvens DSM 2782]
gi|325986435|gb|EGD47267.1| recA protein [Clostridium papyrosolvens DSM 2782]
Length = 348
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/346 (52%), Positives = 258/346 (74%), Gaps = 5/346 (1%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
M +K AL+ AL QI FGKG++M LG + + ++ + TGS +LD+ALG GG+P+GR+
Sbjct: 1 MLEKKKALEMALGQIEKQFGKGAVMKLGEN-SHMNIESIPTGSMSLDLALGVGGVPRGRI 59
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
VE++GPE+SGKTT+ALH+IAEAQ+ GG FIDAEHALDP A+ +GV ENL+++QPD
Sbjct: 60 VEVFGPESSGKTTVALHIIAEAQKAGGEAAFIDAEHALDPVYAKKLGVDIENLIVSQPDT 119
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + + L+RSG++D++V+DSVAALVPK E+DGEMGD+H+ +QARLMSQALRKL+
Sbjct: 120 GEQALEITEALVRSGAIDIIVIDSVAALVPKAEIDGEMGDSHIGLQARLMSQALRKLAGV 179
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
+S S+T IFINQ+R K+ FG P E T GG ALKFY+SVRL+++RI +K+ E +G
Sbjct: 180 ISKSRTTAIFINQLREKVGVM-FGNP-ETTPGGRALKFYSSVRLDVRRIEAIKQANEVVG 237
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF- 299
++ VK+VKNK+APPFK A+F++ +G+GISRE I+D+A+ + +K+GA F+YN +
Sbjct: 238 NRTRVKVVKNKVAPPFKEAEFDIVYGQGISREGSILDIAVSMEIVNKSGAWFSYNGQRIG 297
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVDH-KEPQTAVTDEDST 344
+G+E KQ+L EN ++ E+ +R VV E + A +ED++
Sbjct: 298 QGRENAKQYLKENSAMCSEIEKLIRNNFVVTAVPENEGASEEEDNS 343
>gi|291454543|ref|ZP_06593933.1| RecA protein [Streptomyces albus J1074]
gi|291357492|gb|EFE84394.1| RecA protein [Streptomyces albus J1074]
Length = 377
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/350 (53%), Positives = 255/350 (72%), Gaps = 9/350 (2%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLG-RSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
+ ++ AL AL QI FGKG++M +G R P V V+ TGS ALDIALG GGLP+GRV
Sbjct: 7 TDREKALDAALAQIERQFGKGAVMRMGERPNEP--VEVIPTGSTALDIALGVGGLPRGRV 64
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
VE+YGPE+SGKTTL LH +A AQ+ GG F+DAEHALDP A+ +GV +NL+L+QPD
Sbjct: 65 VEVYGPESSGKTTLTLHAVANAQKAGGQVAFVDAEHALDPEYAKKLGVDIDNLILSQPDN 124
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL +VD L+RSG++D++V+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ +
Sbjct: 125 GEQALEIVDMLVRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITSA 184
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
L+ S+T IFINQ+R K+ FG P E T GG ALKFYASVR++I+RI +K G + +G
Sbjct: 185 LNQSKTTAIFINQLREKIGVM-FGSP-ETTTGGRALKFYASVRIDIRRIETLKDGTDAVG 242
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNF 299
++ K+VKNK+APPFK A+F++ +G GISRE +ID+ ++H F KAGA +TY D+
Sbjct: 243 NRTRCKVVKNKVAPPFKQAEFDILYGHGISREGGLIDMGVEHGFVRKAGAWYTYEGDQLG 302
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVDHKEPQT---AVTDEDSTEE 346
+GKE + FL +N + +E+ K++EKL V + A D +TEE
Sbjct: 303 QGKENARNFLKDNPDLADEIERKIKEKLGVGVRPDAAGSEAAADSAATEE 352
>gi|291548053|emb|CBL21161.1| protein RecA [Ruminococcus sp. SR1/5]
Length = 350
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 185/347 (53%), Positives = 255/347 (73%), Gaps = 5/347 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
+K AL+ AL I FGKGS+M LG S + V V TG +LDIALG GG+PKGR+VE
Sbjct: 5 EKQKALEAALGNIEKQFGKGSVMKLGDSSSHMQVEAVPTGCLSLDIALGVGGVPKGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTT+ALH++AE Q++GG FIDAEHALDP A++IGV +NL ++QPD GE
Sbjct: 65 IYGPESSGKTTVALHMVAEVQKRGGIAGFIDAEHALDPVYAKSIGVDIDNLYISQPDNGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + +T++RSG+VD+V+VDSVAALVPK E++G+MGD+H+ +QARLMSQALRKL+ +S
Sbjct: 125 QALEITETMVRSGAVDIVIVDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKLTAVIS 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S ++IFINQ+R K+ FG P E T GG ALKFYASVR++++R+ +K+G E +G+
Sbjct: 185 KSNCVVIFINQLREKVGVM-FGNP-ETTTGGRALKFYASVRMDVRRVETLKQGGEMVGNH 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRG 301
VK+VKNK+APPFK A+F++ FG GISRE +I+DLA + +K+GA + Y D+ +G
Sbjct: 243 TRVKVVKNKVAPPFKQAEFDIMFGTGISREGDILDLAAECSIVNKSGAWYAYEGDKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKE--PQTAVTDEDSTEE 346
+E K FL E+ +R+E+ K+R +D + + AV ED+ +E
Sbjct: 303 RENAKLFLREHPEIRDEIEKKVRVHYHLDPADETAEAAVQAEDTEKE 349
>gi|220928127|ref|YP_002505036.1| recA protein [Clostridium cellulolyticum H10]
gi|219998455|gb|ACL75056.1| recA protein [Clostridium cellulolyticum H10]
Length = 347
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/337 (54%), Positives = 253/337 (75%), Gaps = 6/337 (1%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
M +K AL+ AL QI FGKG++M LG + + +V ++ TGS +LD+ALG GG+P+GR+
Sbjct: 1 MLEKRKALEMALGQIEKQFGKGAVMKLGEN-SHMNVEIIPTGSMSLDLALGVGGVPRGRI 59
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
VEI+GPE+SGKTT+ALH+IAEAQ+ GG FIDAEHALDP A+ +GV ENL+++QPD
Sbjct: 60 VEIFGPESSGKTTVALHIIAEAQKAGGEAAFIDAEHALDPVYAKKLGVDIENLIVSQPDT 119
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + + L+RSG++DV+VVDSVAALVPK E+DGEMGD+H+ +QARLMSQALRKL+
Sbjct: 120 GEQALEITEALVRSGAIDVIVVDSVAALVPKAEIDGEMGDSHIGLQARLMSQALRKLAGV 179
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
+S S+T IFINQ+R K+ FG P E T GG ALKFY+SVRL+++RI +K+ E +G
Sbjct: 180 ISKSRTTAIFINQLREKVGIM-FGNP-ETTPGGRALKFYSSVRLDVRRIEAIKQSNEVVG 237
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF- 299
++ VK+VKNK+APPFK A+F++ +G+GISRE I+D+A+ + +K+GA F+YN +
Sbjct: 238 NRTRVKVVKNKVAPPFKEAEFDIVYGEGISREGSILDIAVNMEIVNKSGAWFSYNSQRIG 297
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVDHKEPQT 336
+G+E KQ+L EN ++ E+ +R V PQT
Sbjct: 298 QGRENAKQYLKENPAMCSEIEKLVRSNFTVTA--PQT 332
>gi|399521378|ref|ZP_10762118.1| Protein recA;Recombinase A [Pseudomonas pseudoalcaligenes CECT
5344]
gi|399110616|emb|CCH38678.1| Protein recA;Recombinase A [Pseudomonas pseudoalcaligenes CECT
5344]
Length = 347
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/327 (55%), Positives = 240/327 (73%), Gaps = 4/327 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKG++M +G + +P +STGS LDIALG GGLPKGR+VEI
Sbjct: 5 KKRALAAALGQIEKQFGKGAVMRMGDH-ERQAIPAISTGSLGLDIALGIGGLPKGRIVEI 63
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIAEAQ+ G C F+DAEHALDP A +GV ++LL++QPD GEQ
Sbjct: 64 YGPESSGKTTLTLSVIAEAQKLGATCAFVDAEHALDPDYAGKLGVNVDDLLVSQPDTGEQ 123
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RS ++DV++VDSVAALVPK E++GEMGD H+ +QARLMSQALRK++ ++
Sbjct: 124 ALEITDMLVRSNAIDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIKN 183
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
+ ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+R G VK+GEE +GS+
Sbjct: 184 ANCLVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRTGAVKEGEEVVGSET 241
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPF+ A+F++ +GKGI R EIIDL ++ K+GA ++Y +GK
Sbjct: 242 RVKVVKNKVAPPFRQAEFQILYGKGIYRNGEIIDLGVQQGLVEKSGAWYSYKGNKIGQGK 301
Query: 303 EAFKQFLVENESVREELVIKLREKLVV 329
++L +N+ V E+ +REKL+V
Sbjct: 302 ANAAKYLEDNQEVAREIEGLIREKLLV 328
>gi|260773535|ref|ZP_05882451.1| RecA protein [Vibrio metschnikovii CIP 69.14]
gi|260612674|gb|EEX37877.1| RecA protein [Vibrio metschnikovii CIP 69.14]
Length = 349
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 189/347 (54%), Positives = 247/347 (71%), Gaps = 8/347 (2%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGSIM LG + T V +STGS +LDIALG GGLP GR+VE+
Sbjct: 5 KQKALAAALGQIEKQFGKGSIMLLGDNRT-MDVETISTGSLSLDIALGAGGLPMGRIVEV 63
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L +IA AQR+G C FIDAEHALDP A+ +GVK +LL++QPD GEQ
Sbjct: 64 YGPESSGKTTLTLELIASAQREGKTCAFIDAEHALDPIYAQKLGVKINDLLVSQPDTGEQ 123
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L RSG+VDV+VVDSVAAL PK E++GEMGD+HM +QAR++SQA+RKL+ +L
Sbjct: 124 ALEICDALARSGAVDVIVVDSVAALTPKAEIEGEMGDSHMGLQARMLSQAMRKLTGNLKQ 183
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S + IFINQ+R K+ FG P E T GGNALKFYASVRL+I+R G +K+G+E +G++
Sbjct: 184 SNCMCIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRTGAIKEGDEVVGNET 241
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGK 302
+K+VKNK+A PFK A ++ +G+G +RE E++DL +KHK K+GA ++YN D+ +GK
Sbjct: 242 RIKVVKNKIAAPFKEANTQIMYGQGFNREGELVDLGVKHKLIEKSGAWYSYNGDKIGQGK 301
Query: 303 EAFKQFLVENESVREELVIKLREKLV----VDHKEPQTAVTDEDSTE 345
+FL E+ + + KLRE L+ V EP+ V E E
Sbjct: 302 ANACKFLREHPEASKAIDSKLREMLLSPEQVPLDEPEFGVIPEQEEE 348
>gi|153954070|ref|YP_001394835.1| recombinase A [Clostridium kluyveri DSM 555]
gi|219854683|ref|YP_002471805.1| hypothetical protein CKR_1340 [Clostridium kluyveri NBRC 12016]
gi|146346951|gb|EDK33487.1| RecA [Clostridium kluyveri DSM 555]
gi|219568407|dbj|BAH06391.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 363
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 185/355 (52%), Positives = 260/355 (73%), Gaps = 12/355 (3%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
A++ A+ QI FGKG+IM LG + + +V VVSTG LDIALG GG+P+GRV+EI+GP
Sbjct: 11 AIESAMLQIEKQFGKGAIMKLGEN-SILNVDVVSTGCLDLDIALGIGGVPRGRVIEIFGP 69
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTT+ALH+IAEAQ+ GG FIDAEHALDPS A+ +GV ENL+++QPD GEQAL
Sbjct: 70 ESSGKTTVALHIIAEAQKTGGAAAFIDAEHALDPSYAKNLGVDIENLIVSQPDTGEQALE 129
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ + L+RS ++DV+VVDSVAALVPK E++GEMGD+H+ +QARLMSQALRKL+ S++ S+
Sbjct: 130 IAEALVRSNAIDVLVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTSSINKSKC 189
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
+ IFINQ+R K+ FG P EVT GG ALKFY+SVR++++RI +K+G+ +G++ VK
Sbjct: 190 VTIFINQLREKVGIM-FGNP-EVTPGGRALKFYSSVRMDVRRIDSIKQGDTMVGNRTKVK 247
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYND-RNFRGKEAF 305
++KNK+APPFK A+F++ + +GISRE ++D+ ++ F K+GA F+Y + R +G+E
Sbjct: 248 VIKNKVAPPFKQAEFDIMYNQGISREGNVLDVGVREDFVQKSGAWFSYKEIRLGQGRENA 307
Query: 306 KQFLVENESVREELVIKLREK--LVVDH------KEPQTAVTDEDSTEETVSTIS 352
KQFL EN + E+ K+REK L +D K T ED+ ++ +S
Sbjct: 308 KQFLRENTDILFEIENKIREKYNLPIDKSNLSSDKNQNEKSTKEDNKKQDSKNLS 362
>gi|398782012|ref|ZP_10545875.1| recombinase A [Streptomyces auratus AGR0001]
gi|396997028|gb|EJJ08004.1| recombinase A [Streptomyces auratus AGR0001]
Length = 373
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/336 (54%), Positives = 254/336 (75%), Gaps = 7/336 (2%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLG-RSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
+ ++ AL AL QI FGKG++M +G RS P + V+ TGS ALD+ALG GGLP+GRV
Sbjct: 4 TDREKALDAALAQIERQFGKGAVMRMGERSKEP--IEVIPTGSTALDVALGVGGLPRGRV 61
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+E+YGPE+SGKTTL LH +A AQ+ GG FIDAEHALDP A+ +GV T++L+L+QPD
Sbjct: 62 IEVYGPESSGKTTLTLHAVANAQKAGGSVAFIDAEHALDPEYAKKLGVDTDSLILSQPDN 121
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + D LIRSG++D++V+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ +
Sbjct: 122 GEQALEITDMLIRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITSA 181
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
L+ S+T IFINQ+R K+ FG P E T GG ALKFYASVRL+I+RI +K G + +G
Sbjct: 182 LNQSKTTAIFINQLREKIGVM-FGSP-ETTTGGRALKFYASVRLDIRRIETLKDGTDAVG 239
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNF 299
++ VK+VKNK++PPFK A+F++ +G+GISRE +ID+ ++H F K+GA +TY D+
Sbjct: 240 NRTRVKVVKNKVSPPFKQAEFDILYGQGISREGGLIDMGVEHGFVRKSGAWYTYEGDQLG 299
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVDHKEPQ 335
+GKE + FL +N + +E+ K++EKL + K PQ
Sbjct: 300 QGKENARNFLKDNPDLADEIEKKIKEKLGIGVK-PQ 334
>gi|254786787|ref|YP_003074216.1| recombinase A [Teredinibacter turnerae T7901]
gi|259563346|sp|C5BMR1.1|RECA_TERTT RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|237684795|gb|ACR12059.1| DNA recombinase RecA [Teredinibacter turnerae T7901]
Length = 342
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/328 (55%), Positives = 242/328 (73%), Gaps = 4/328 (1%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVV 61
+ K+ ALQ AL QI FGKG++M +G +P VSTGS LD+ALG GGLPKGR+V
Sbjct: 3 ANKEKALQAALQQIDRQFGKGTVMRMGDK-ELEAIPAVSTGSLGLDVALGIGGLPKGRIV 61
Query: 62 EIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCG 121
EIYGPE+SGKTTL L VIAEAQR+GG C F+DAEHALDP A +GV ++L+++QPD G
Sbjct: 62 EIYGPESSGKTTLTLQVIAEAQRKGGTCAFVDAEHALDPIYAAKLGVNVDDLIVSQPDTG 121
Query: 122 EQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSL 181
EQAL + D L+RSG++DV+VVDSVAAL PK E++GEMGD H+ +QARLMSQALRK++ ++
Sbjct: 122 EQALEVADMLVRSGAIDVLVVDSVAALTPKAEIEGEMGDHHVGLQARLMSQALRKITGNI 181
Query: 182 SLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGS 241
+ + IFINQ+R K+ FG P E T GGNALKFY+SVRL+I+RIG VK G+E IGS
Sbjct: 182 KNANCLAIFINQIRMKIGVM-FGNP-ETTTGGNALKFYSSVRLDIRRIGSVKDGDEVIGS 239
Query: 242 QIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFR 300
+ VK+VKNK+APPFK +F++ +G GI+R E+ID +K KAGA ++YN D+ +
Sbjct: 240 ETRVKVVKNKVAPPFKQTEFQILYGTGINRLGEVIDYGVKLGLIDKAGAWYSYNGDKIGQ 299
Query: 301 GKEAFKQFLVENESVREELVIKLREKLV 328
GK Q+L E+ V + L +L+ +L+
Sbjct: 300 GKNNAIQYLREHSDVAQTLEDRLKAELL 327
>gi|416066729|ref|ZP_11582082.1| protein RecA [Aggregatibacter actinomycetemcomitans serotype f str.
D18P1]
gi|348002569|gb|EGY43251.1| protein RecA [Aggregatibacter actinomycetemcomitans serotype f str.
D18P1]
Length = 352
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/344 (54%), Positives = 251/344 (72%), Gaps = 7/344 (2%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
+K AL AL QI FGKG+IM LG S + +STGSF LD+ALG GGLP GR+VE
Sbjct: 6 EKQKALDAALGQIEKQFGKGAIMKLGDS-QKLDIEAISTGSFGLDLALGIGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
I+GPE+SGKTTL L VIAEAQ+ G C FIDAEHALDP A +GV + LL++QPD GE
Sbjct: 65 IFGPESSGKTTLTLSVIAEAQKTGKTCAFIDAEHALDPIYASKLGVDVKELLVSQPDNGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L+RSG+VDV++VDSVAAL PK E++G+MGD+HM +QARLMSQALRKL+ +
Sbjct: 125 QALEICDALVRSGAVDVIIVDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTSQIK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+R+G +K+G+E IG++
Sbjct: 185 NANCLVIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRVGSIKEGDEVIGNE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRG 301
VK+VKNK+APPF+ F++ +G+GIS+ESE+I+L +KHK SKAGA + Y N++ +G
Sbjct: 243 TRVKVVKNKVAPPFRQVDFQILYGEGISKESELIELGVKHKLISKAGAWYAYQNEKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTE 345
K ++L +N + + LR++L+ P++A+T E E
Sbjct: 303 KTNAMKWLKDNPEQAKFIESTLRDELLA---HPESAITAEVENE 343
>gi|183981991|ref|YP_001850282.1| recombinase A [Mycobacterium marinum M]
gi|443490391|ref|YP_007368538.1| recombinase A RecA [Mycobacterium liflandii 128FXT]
gi|238690925|sp|B2HL06.1|RECA_MYCMM RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|183175317|gb|ACC40427.1| recombinase A RecA [Mycobacterium marinum M]
gi|442582888|gb|AGC62031.1| recombinase A RecA [Mycobacterium liflandii 128FXT]
Length = 346
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/325 (55%), Positives = 244/325 (75%), Gaps = 4/325 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
++ AL+ A+ QI S+GKGS+M LG V + + ++ TGS ALD+ALG GGLP+GRV+EI
Sbjct: 7 REKALELAMAQIEKSYGKGSVMRLGDEVR-QPISIIPTGSIALDVALGIGGLPRGRVIEI 65
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ALH +A AQ GG FIDAEHALDP A+ +GV T++LL++QPD GEQ
Sbjct: 66 YGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPEYAKKLGVDTDSLLVSQPDTGEQ 125
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D LIRSG++D+VV+DSVAALVP+ EL+GEMGD+H+ +QARLMSQALRK++ +L+
Sbjct: 126 ALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMTGALNN 185
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T IFINQ+R K+ FG P E T GG ALKFYASVR++++RI +K G +G++
Sbjct: 186 SGTTAIFINQLRDKIGVM-FGSP-ETTTGGKALKFYASVRMDVRRIETLKDGTNAVGNRT 243
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VKIVKNK++PPFK A+F++ +G+GISRE +ID+ + F K+GA FTY +GK
Sbjct: 244 RVKIVKNKVSPPFKQAEFDILYGRGISREGSLIDMGVDQGFIRKSGAWFTYEGEQLGQGK 303
Query: 303 EAFKQFLVENESVREELVIKLREKL 327
E + FL+EN V E+ K++EKL
Sbjct: 304 ENARNFLLENGEVANEIEKKIKEKL 328
>gi|157164266|ref|YP_001467588.1| recombinase A [Campylobacter concisus 13826]
gi|365154226|ref|ZP_09350659.1| protein recA [Campylobacter sp. 10_1_50]
gi|416115816|ref|ZP_11594203.1| RecA protein [Campylobacter concisus UNSWCD]
gi|112801133|gb|EAT98477.1| protein RecA [Campylobacter concisus 13826]
gi|363650064|gb|EHL89155.1| protein recA [Campylobacter sp. 10_1_50]
gi|384577701|gb|EIF06979.1| RecA protein [Campylobacter concisus UNSWCD]
Length = 365
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 178/344 (51%), Positives = 248/344 (72%), Gaps = 3/344 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI +FGKG+++ LG + + TGS LD+ALG GG+PKGR++EI
Sbjct: 20 KKKALELALKQIDKAFGKGTLLRLGDKEV-EAIESIPTGSLGLDLALGIGGVPKGRIIEI 78
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL LH+IAEAQ+ GG C F+DAEHALD A +GV T+NL ++QPD GEQ
Sbjct: 79 YGPESSGKTTLTLHIIAEAQKAGGICAFVDAEHALDVKYASNLGVNTDNLYVSQPDFGEQ 138
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL +V+TL RSG++D++VVDSVAAL PK E+DG+MGD H+ +QARLMSQALRKL+ LS
Sbjct: 139 ALEIVETLARSGAIDLIVVDSVAALTPKSEIDGDMGDQHVGLQARLMSQALRKLTGILSK 198
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
+T +IFINQ+R K+ G+G P E T GGNALKFY+SVR+++++I +K+ +E IG++
Sbjct: 199 MKTTVIFINQIRMKIGMMGYGTP-ETTTGGNALKFYSSVRIDVRKIATLKQNDEPIGNRT 257
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
K+VKNK+APPFK A+F++ FG+G+S+E EIID +K K+GA F+Y +G+
Sbjct: 258 KAKVVKNKVAPPFKVAEFDIMFGEGVSKEGEIIDYGVKLDIIDKSGAWFSYKAEKLGQGR 317
Query: 303 EAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEE 346
E K +L E+ + +E+V ++ + +DH A ++D T E
Sbjct: 318 ENAKAYLKEHPEISDEIVAAIKGSMGIDHLISSGAKDEDDDTNE 361
>gi|260574638|ref|ZP_05842641.1| recA protein [Rhodobacter sp. SW2]
gi|259023055|gb|EEW26348.1| recA protein [Rhodobacter sp. SW2]
Length = 360
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/327 (55%), Positives = 241/327 (73%), Gaps = 7/327 (2%)
Query: 3 KKDL----ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKG 58
K+D+ AL+ AL QI FGKGSIM LG + + STGS LDIALG GGLPKG
Sbjct: 12 KRDMDKAKALESALAQIERQFGKGSIMKLGANSPAMDIESTSTGSLGLDIALGIGGLPKG 71
Query: 59 RVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQP 118
R++EIYGPE+SGKTTL LHV+AE Q++GG C F+DAEHALDP A+ +GV + LL++QP
Sbjct: 72 RIIEIYGPESSGKTTLTLHVVAEEQKKGGVCAFVDAEHALDPQYAKKLGVNLDELLISQP 131
Query: 119 DCGEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLS 178
D GEQAL +VDTL+RSG+V +VV+DSVAALVPK E++G+MGD M QARLMSQA+RKL+
Sbjct: 132 DTGEQALEIVDTLVRSGAVSLVVIDSVAALVPKSEIEGDMGDMQMGSQARLMSQAMRKLT 191
Query: 179 HSLSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEET 238
S+ S +++FINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K +E
Sbjct: 192 ASIGRSNCMVVFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKDRDEV 249
Query: 239 IGSQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYND-R 297
+GS VK+VKNK+APPFK +F++ +G+GIS+ E+ID+ +K K+G+ ++Y D R
Sbjct: 250 VGSSTRVKVVKNKVAPPFKQVEFDIMYGEGISKTGELIDIGVKAGVVEKSGSWYSYGDER 309
Query: 298 NFRGKEAFKQFLVENESVREELVIKLR 324
+G+E K FL +N +V E+ K+R
Sbjct: 310 IGQGRENAKLFLKQNPAVAMEIEDKIR 336
>gi|239946715|ref|ZP_04698468.1| protein RecA [Rickettsia endosymbiont of Ixodes scapularis]
gi|239920991|gb|EER21015.1| protein RecA [Rickettsia endosymbiont of Ixodes scapularis]
Length = 362
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 189/327 (57%), Positives = 249/327 (76%), Gaps = 6/327 (1%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPR-HVPVVSTGSFALDIALGTGGLPKGRV 60
+ K+ A+ AL QI S+GKGS+M LG+ P + VSTGS LDIALG GG+PKGR+
Sbjct: 23 TDKERAIAAALTQIEKSYGKGSVMKLGQR--PNVDIEAVSTGSLGLDIALGIGGVPKGRI 80
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+EI+GPE+SGKTTL LH+IAEAQ++GG C FIDAEHALDP+ A+ +GV + L+++QPD
Sbjct: 81 IEIFGPESSGKTTLTLHLIAEAQKKGGTCAFIDAEHALDPAYAKKLGVNIDELIISQPDT 140
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + DTLIRSG +D++++DSVAALVPK E++GEMGDA MA QARLMSQALRKL+ S
Sbjct: 141 GEQALEIADTLIRSGGIDMIIIDSVAALVPKSEIEGEMGDAQMASQARLMSQALRKLTAS 200
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
++ + I +FINQ+R K+ FG P E T GGNALKFYASVR++I+RIG +K EE IG
Sbjct: 201 INRTNCITVFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRIDIRRIGSIKDKEEVIG 258
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYND-RNF 299
SQ VK+VKNK++PPFKTA F++ +G GIS+E EIIDL +K K+G+ F+YN+ R
Sbjct: 259 SQTKVKVVKNKVSPPFKTADFDIMYGSGISKEGEIIDLGVKLDIVEKSGSWFSYNNVRIG 318
Query: 300 RGKEAFKQFLVENESVREELVIKLREK 326
+G+E KQ+L E+ + E+ +REK
Sbjct: 319 QGRENVKQYLKEHPQISNEIEKIIREK 345
>gi|148273206|ref|YP_001222767.1| recombinase A [Clavibacter michiganensis subsp. michiganensis NCPPB
382]
gi|166220639|sp|A5CSL7.1|RECA_CLAM3 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|147831136|emb|CAN02088.1| recombinase A [Clavibacter michiganensis subsp. michiganensis NCPPB
382]
Length = 362
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/327 (55%), Positives = 245/327 (74%), Gaps = 4/327 (1%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVV 61
+ ++ +L+ AL QI FGKGS+M LG S V V+ TGS ALD+ALG GGLP+GR+V
Sbjct: 5 ADREKSLETALAQIDRQFGKGSVMRLG-SDERAPVAVIPTGSVALDVALGIGGLPRGRIV 63
Query: 62 EIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCG 121
EIYGPE+SGKTTL LH IA AQR GG FIDAEHALDP A+ +GV + LL++QPD G
Sbjct: 64 EIYGPESSGKTTLTLHAIANAQRAGGIAAFIDAEHALDPEYAKKLGVDIDALLVSQPDTG 123
Query: 122 EQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSL 181
EQAL + D L+RSGS+D+VV+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRKL+ L
Sbjct: 124 EQALEIADMLVRSGSIDLVVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLTGGL 183
Query: 182 SLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGS 241
+ +QT +IFINQ+R K+ F FG P E T GG ALKFYASVRL+I+RI +K G + +G+
Sbjct: 184 NQTQTTMIFINQLREKIGVF-FGSP-ETTAGGKALKFYASVRLDIRRIETLKDGTDAVGN 241
Query: 242 QIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFR 300
+ VK+VKNK+APPFK A+F++ +G GISRE +ID ++H+ K+GA +TY+ D+ +
Sbjct: 242 RTRVKVVKNKMAPPFKQAEFDILYGTGISREGSLIDFGVEHEIVRKSGAWYTYDGDQLGQ 301
Query: 301 GKEAFKQFLVENESVREELVIKLREKL 327
GKE ++ L+ N + E+ K++ KL
Sbjct: 302 GKENSRKHLLNNPEIAAEIEQKIKVKL 328
>gi|88855434|ref|ZP_01130098.1| recombination repairing protein [marine actinobacterium PHSC20C1]
gi|88815341|gb|EAR25199.1| recombination repairing protein [marine actinobacterium PHSC20C1]
Length = 386
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 184/329 (55%), Positives = 243/329 (73%), Gaps = 4/329 (1%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVV 61
+ ++ +L+ AL QI FGKGS+M LG S V V+ TGS ALD+ALG GGLP+GR+V
Sbjct: 5 ADREKSLETALAQIDRQFGKGSVMRLG-SDERAPVEVIPTGSIALDVALGIGGLPRGRIV 63
Query: 62 EIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCG 121
EIYGPE+SGKTTL LH IA AQR GG FIDAEHALDP A +GV + LL++QPD G
Sbjct: 64 EIYGPESSGKTTLTLHAIANAQRNGGIAAFIDAEHALDPEYAAKLGVDIDALLVSQPDTG 123
Query: 122 EQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSL 181
EQAL + D L+RSGS+D++V+DSVAALVP+ E++GEMGD H+ +QARLMSQALRKL+ L
Sbjct: 124 EQALEIADMLVRSGSIDLIVIDSVAALVPRAEIEGEMGDTHVGLQARLMSQALRKLTGGL 183
Query: 182 SLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGS 241
S + T +IFINQ+R K+ F FG P E T GG ALKFYASVRL+I+RI +K G + +G+
Sbjct: 184 SQTNTTMIFINQLREKIGVF-FGSP-ETTAGGKALKFYASVRLDIRRIETLKDGTDAVGN 241
Query: 242 QIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFR 300
+ VK+VKNK+APPFK A+F++ +G GISRE +ID + H+ K+GA +TY+ D+ +
Sbjct: 242 RTRVKVVKNKMAPPFKQAEFDILYGIGISREGSLIDFGVDHEIVRKSGAWYTYDGDQLGQ 301
Query: 301 GKEAFKQFLVENESVREELVIKLREKLVV 329
GKE + FL++N ++ E+ K+ KL V
Sbjct: 302 GKEKSRAFLIQNPAIALEIEQKIMRKLGV 330
>gi|170781613|ref|YP_001709945.1| recombinase A [Clavibacter michiganensis subsp. sepedonicus]
gi|169156181|emb|CAQ01323.1| recombinase A [Clavibacter michiganensis subsp. sepedonicus]
Length = 405
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/327 (55%), Positives = 245/327 (74%), Gaps = 4/327 (1%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVV 61
+ ++ +L+ AL QI FGKGS+M LG S V V+ TGS ALD+ALG GGLP+GR+V
Sbjct: 48 ADREKSLETALAQIDRQFGKGSVMRLG-SDERAPVAVIPTGSVALDVALGIGGLPRGRIV 106
Query: 62 EIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCG 121
EIYGPE+SGKTTL LH IA AQR GG FIDAEHALDP A+ +GV + LL++QPD G
Sbjct: 107 EIYGPESSGKTTLTLHAIANAQRAGGIAAFIDAEHALDPEYAKKLGVDIDALLVSQPDTG 166
Query: 122 EQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSL 181
EQAL + D L+RSGS+D+VV+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRKL+ L
Sbjct: 167 EQALEIADMLVRSGSIDLVVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLTGGL 226
Query: 182 SLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGS 241
+ +QT +IFINQ+R K+ F FG P E T GG ALKFYASVRL+I+RI +K G + +G+
Sbjct: 227 NQTQTTMIFINQLREKIGVF-FGSP-ETTAGGKALKFYASVRLDIRRIETLKDGTDAVGN 284
Query: 242 QIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFR 300
+ VK+VKNK+APPFK A+F++ +G GISRE +ID ++H+ K+GA +TY+ D+ +
Sbjct: 285 RTRVKVVKNKMAPPFKQAEFDILYGTGISREGSLIDFGVEHEIVRKSGAWYTYDGDQLGQ 344
Query: 301 GKEAFKQFLVENESVREELVIKLREKL 327
GKE ++ L+ N + E+ K++ KL
Sbjct: 345 GKENSRKHLLNNPEIAAEIEQKIKVKL 371
>gi|313144733|ref|ZP_07806926.1| protein recA [Helicobacter cinaedi CCUG 18818]
gi|386761050|ref|YP_006234685.1| recombinase A [Helicobacter cinaedi PAGU611]
gi|313129764|gb|EFR47381.1| protein recA [Helicobacter cinaedi CCUG 18818]
gi|385146066|dbj|BAM11574.1| recombinase A [Helicobacter cinaedi PAGU611]
gi|396078134|dbj|BAM31510.1| recombinase A [Helicobacter cinaedi ATCC BAA-847]
Length = 344
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 175/326 (53%), Positives = 246/326 (75%), Gaps = 3/326 (0%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
+K A++ AL QI +FGKG+++ LG + + +STGS LD+ALG GG+PKGR++E
Sbjct: 5 RKQKAIELALKQIDKAFGKGALVRLGDKQVEK-IDSISTGSLGLDMALGIGGVPKGRIIE 63
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL+L ++AE Q+ GG C FIDAEHALD A+ +GV TENLL++QPD GE
Sbjct: 64 IYGPESSGKTTLSLQIVAECQKNGGICAFIDAEHALDVYYAKHLGVDTENLLVSQPDTGE 123
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL +++TL RSG+VD+VV+DSVAAL PK E++G+MGD H+ +QARLMS ALRK++ L
Sbjct: 124 QALEILETLTRSGAVDLVVIDSVAALTPKAEIEGDMGDQHVGLQARLMSHALRKITGILH 183
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
T LIFINQ+R K+ G+G P E T GGNALKFYASVR++++RI +K+ E+ IG++
Sbjct: 184 KMNTTLIFINQIRMKIGVMGYGSP-ETTTGGNALKFYASVRIDVRRIATLKQNEQQIGNR 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
K+VKNK+APPF+ A+F++ FG+GISRE EIID +K K+GA +YND+ +G
Sbjct: 243 TKAKVVKNKVAPPFREAEFDIMFGEGISREGEIIDYGIKLDIIDKSGAWLSYNDKKLGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKL 327
+E K L E++++ EE+ +K++E++
Sbjct: 303 RENAKLLLKEDKALAEEITLKIKEQI 328
>gi|150171047|emb|CAO01507.1| DNA recombination protein [Burkholderia metallica]
Length = 334
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/336 (55%), Positives = 243/336 (72%), Gaps = 4/336 (1%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL AL QI FGKGSIM +G + ++ VVSTGS LDIALG GGLP+GRVVEIYGP
Sbjct: 1 ALAAALAQIEKQFGKGSIMRMGDAEAAENIQVVSTGSLGLDIALGVGGLPRGRVVEIYGP 60
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTTL L VIAE Q+ GG FIDAEHALD A +GV LL++QPD GEQAL
Sbjct: 61 ESSGKTTLTLQVIAELQKLGGTAAFIDAEHALDVQYAAKLGVNVPELLISQPDTGEQALE 120
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ D L+RSGS+D++V+DSVAALVPK E++GEMGD+ +QARLMSQALRKL+ ++ +
Sbjct: 121 ITDALVRSGSIDMIVIDSVAALVPKAEIEGEMGDSLPGLQARLMSQALRKLTGTIKRTNC 180
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
++IFINQ+R K+ FG P E T GGNALKFY+SVRL+I+RIG +KK +E IG++ VK
Sbjct: 181 LVIFINQIRMKIGVM-FGNP-ETTTGGNALKFYSSVRLDIRRIGSIKKNDEVIGNETRVK 238
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGKEAF 305
+VKNK++PPF+ A F++ +G+GISR+ EIIDL ++ K KAGA ++YN +GK+
Sbjct: 239 VVKNKVSPPFREAIFDILYGEGISRQGEIIDLGVQAKIVDKAGAWYSYNGEKIGQGKDNA 298
Query: 306 KQFLVENESVREELVIKLREKLVVDHKEPQTAVTDE 341
++FL EN + E+ ++RE L V P V DE
Sbjct: 299 REFLRENPEIAREIENRIRESLGV-VTMPDGVVEDE 333
>gi|359148557|ref|ZP_09181698.1| recombinase A [Streptomyces sp. S4]
gi|421738381|ref|ZP_16176741.1| protein RecA [Streptomyces sp. SM8]
gi|406693222|gb|EKC96883.1| protein RecA [Streptomyces sp. SM8]
Length = 374
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/350 (53%), Positives = 255/350 (72%), Gaps = 9/350 (2%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLG-RSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
+ ++ AL AL QI FGKG++M +G R P V V+ TGS ALDIALG GGLP+GRV
Sbjct: 4 TDREKALDAALAQIERQFGKGAVMRMGERPNEP--VEVIPTGSTALDIALGVGGLPRGRV 61
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
VE+YGPE+SGKTTL LH +A AQ+ GG F+DAEHALDP A+ +GV +NL+L+QPD
Sbjct: 62 VEVYGPESSGKTTLTLHAVANAQKAGGQVAFVDAEHALDPEYAKKLGVDIDNLILSQPDN 121
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL +VD L+RSG++D++V+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ +
Sbjct: 122 GEQALEIVDMLVRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITSA 181
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
L+ S+T IFINQ+R K+ FG P E T GG ALKFYASVR++I+RI +K G + +G
Sbjct: 182 LNQSKTTAIFINQLREKIGVM-FGSP-ETTTGGRALKFYASVRIDIRRIETLKDGTDAVG 239
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNF 299
++ K+VKNK+APPFK A+F++ +G GISRE +ID+ ++H F KAGA +TY D+
Sbjct: 240 NRTRCKVVKNKVAPPFKQAEFDILYGHGISREGGLIDMGVEHGFVRKAGAWYTYEGDQLG 299
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVDHKEPQT---AVTDEDSTEE 346
+GKE + FL +N + +E+ K++EKL V + A D +TEE
Sbjct: 300 QGKENARNFLKDNPDLADEIERKIKEKLGVGVRPDAAGSEAAADSAATEE 349
>gi|400976499|ref|ZP_10803730.1| recombinase A [Salinibacterium sp. PAMC 21357]
Length = 386
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 184/329 (55%), Positives = 243/329 (73%), Gaps = 4/329 (1%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVV 61
+ ++ +L+ AL QI FGKGS+M LG S V V+ TGS ALD+ALG GGLP+GR+V
Sbjct: 5 ADREKSLETALAQIDRQFGKGSVMRLG-SDERAPVEVIPTGSIALDVALGIGGLPRGRIV 63
Query: 62 EIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCG 121
EIYGPE+SGKTTL LH IA AQR GG FIDAEHALDP A +GV + LL++QPD G
Sbjct: 64 EIYGPESSGKTTLTLHAIANAQRNGGIAAFIDAEHALDPEYAAKLGVDIDALLVSQPDTG 123
Query: 122 EQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSL 181
EQAL + D L+RSGS+D++V+DSVAALVP+ E++GEMGD H+ +QARLMSQALRKL+ L
Sbjct: 124 EQALEIADMLVRSGSIDLIVIDSVAALVPRAEIEGEMGDTHVGLQARLMSQALRKLTGGL 183
Query: 182 SLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGS 241
S + T +IFINQ+R K+ F FG P E T GG ALKFYASVRL+I+RI +K G + +G+
Sbjct: 184 SQTNTTMIFINQLREKIGVF-FGSP-ETTAGGKALKFYASVRLDIRRIETLKDGTDAVGN 241
Query: 242 QIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFR 300
+ VK+VKNK+APPFK A+F++ +G GISRE +ID + H+ K+GA +TY+ D+ +
Sbjct: 242 RTRVKVVKNKMAPPFKQAEFDILYGIGISREGSLIDFGVDHEIVRKSGAWYTYDGDQLGQ 301
Query: 301 GKEAFKQFLVENESVREELVIKLREKLVV 329
GKE + FL++N ++ E+ K+ KL V
Sbjct: 302 GKEKSRAFLLQNPAIALEIEQKIMRKLGV 330
>gi|218290126|ref|ZP_03494288.1| recA protein [Alicyclobacillus acidocaldarius LAA1]
gi|218239835|gb|EED07024.1| recA protein [Alicyclobacillus acidocaldarius LAA1]
Length = 352
Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust.
Identities = 184/335 (54%), Positives = 244/335 (72%), Gaps = 4/335 (1%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
M K AL+QAL I FGKGSIM LG + V V TGS ALDIALG GGLP+GR+
Sbjct: 1 MGDKKAALEQALKHIEKQFGKGSIMRLGEAAA-MTVETVPTGSIALDIALGVGGLPRGRI 59
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
VEIYGPE+SGKTT+ALHV+AE Q+ GG FIDAEHALDP A+ +GV + LL++QPD
Sbjct: 60 VEIYGPESSGKTTVALHVVAEVQKLGGQAAFIDAEHALDPVYAQKLGVNIDELLISQPDT 119
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + + L+RSG+VDV+VVDSVAALVPK EL+G+MGD+H+ +QARLMSQALRKL+ +
Sbjct: 120 GEQALEIAEALVRSGAVDVIVVDSVAALVPKNELEGDMGDSHVGLQARLMSQALRKLAGA 179
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
+S S+TI IFINQ+R K+ FG P E T GG ALKFYASVRL ++R+ +K+G + +G
Sbjct: 180 ISKSKTIAIFINQIREKVGVM-FGNP-ETTTGGRALKFYASVRLEVRRVEAIKQGNDVVG 237
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF- 299
S+ +K+VKNK+APPF+ ++ FG+GISRE +ID+A + K+GA ++Y +
Sbjct: 238 SRTRIKVVKNKVAPPFRQCDVDIMFGEGISREGSLIDIATEIDVVQKSGAWYSYGEERLG 297
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVDHKEP 334
+G+E KQFL E+ + E++ +RE V+ +P
Sbjct: 298 QGRENAKQFLKEHPEIAEQIEAAVREYFHVNPAKP 332
>gi|261866979|ref|YP_003254901.1| recombinase A [Aggregatibacter actinomycetemcomitans D11S-1]
gi|365966788|ref|YP_004948350.1| recombinase A [Aggregatibacter actinomycetemcomitans ANH9381]
gi|387121138|ref|YP_006287021.1| protein RecA [Aggregatibacter actinomycetemcomitans D7S-1]
gi|415766346|ref|ZP_11482942.1| protein RecA [Aggregatibacter actinomycetemcomitans D17P-3]
gi|415770878|ref|ZP_11485106.1| protein RecA [Aggregatibacter actinomycetemcomitans D17P-2]
gi|416036043|ref|ZP_11573601.1| protein RecA [Aggregatibacter actinomycetemcomitans serotype a str.
H5P1]
gi|416048615|ref|ZP_11576357.1| protein RecA [Aggregatibacter actinomycetemcomitans serotype d str.
I63B]
gi|416061560|ref|ZP_11581199.1| protein RecA [Aggregatibacter actinomycetemcomitans serotype e str.
SCC393]
gi|416077395|ref|ZP_11585876.1| protein RecA [Aggregatibacter actinomycetemcomitans serotype b str.
SCC1398]
gi|416107044|ref|ZP_11590189.1| protein RecA [Aggregatibacter actinomycetemcomitans serotype c str.
SCC2302]
gi|429734507|ref|ZP_19268519.1| RecA protein [Aggregatibacter actinomycetemcomitans Y4]
gi|444331502|ref|ZP_21148942.1| protein RecA [Aggregatibacter actinomycetemcomitans serotype a str.
A160]
gi|444344240|ref|ZP_21152530.1| protein RecA [Aggregatibacter actinomycetemcomitans serotype b str.
SCC4092]
gi|444347049|ref|ZP_21154998.1| protein RecA [Aggregatibacter actinomycetemcomitans serotype c str.
AAS4A]
gi|444348279|ref|ZP_21155981.1| protein RecA [Aggregatibacter actinomycetemcomitans serotype b str.
S23A]
gi|261412311|gb|ACX81682.1| protein RecA [Aggregatibacter actinomycetemcomitans D11S-1]
gi|347992478|gb|EGY33876.1| protein RecA [Aggregatibacter actinomycetemcomitans serotype d str.
I63B]
gi|347996878|gb|EGY37924.1| protein RecA [Aggregatibacter actinomycetemcomitans serotype a str.
H5P1]
gi|347997646|gb|EGY38625.1| protein RecA [Aggregatibacter actinomycetemcomitans serotype e str.
SCC393]
gi|348004005|gb|EGY44543.1| protein RecA [Aggregatibacter actinomycetemcomitans serotype b str.
SCC1398]
gi|348005751|gb|EGY46223.1| protein RecA [Aggregatibacter actinomycetemcomitans serotype c str.
SCC2302]
gi|348653647|gb|EGY69347.1| protein RecA [Aggregatibacter actinomycetemcomitans D17P-3]
gi|348656529|gb|EGY74141.1| protein RecA [Aggregatibacter actinomycetemcomitans D17P-2]
gi|365745701|gb|AEW76606.1| recombinase A [Aggregatibacter actinomycetemcomitans ANH9381]
gi|385875630|gb|AFI87189.1| protein RecA [Aggregatibacter actinomycetemcomitans D7S-1]
gi|429151793|gb|EKX94646.1| RecA protein [Aggregatibacter actinomycetemcomitans Y4]
gi|443540883|gb|ELT51393.1| protein RecA [Aggregatibacter actinomycetemcomitans serotype c str.
AAS4A]
gi|443544503|gb|ELT54479.1| protein RecA [Aggregatibacter actinomycetemcomitans serotype b str.
SCC4092]
gi|443547405|gb|ELT56906.1| protein RecA [Aggregatibacter actinomycetemcomitans serotype b str.
S23A]
gi|443552352|gb|ELT59758.1| protein RecA [Aggregatibacter actinomycetemcomitans serotype a str.
A160]
Length = 352
Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/344 (54%), Positives = 251/344 (72%), Gaps = 7/344 (2%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
+K AL AL QI FGKG+IM LG S + +STGSF LD+ALG GGLP GR+VE
Sbjct: 6 EKQKALDAALGQIEKQFGKGAIMKLGDS-QKLDIEAISTGSFGLDLALGIGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
I+GPE+SGKTTL L VIAEAQ+ G C FIDAEHALDP A +GV + LL++QPD GE
Sbjct: 65 IFGPESSGKTTLTLSVIAEAQKTGKTCAFIDAEHALDPIYASKLGVDVKELLVSQPDNGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L+RSG+VDV++VDSVAAL PK E++G+MGD+HM +QARLMSQALRKL+ +
Sbjct: 125 QALEICDALVRSGAVDVIIVDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTSQIK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+R+G +K+G+E IG++
Sbjct: 185 NANCLVIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRVGSIKEGDEVIGNE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRG 301
VK+VKNK+APPF+ F++ +G+GIS+ESE+I+L +KHK SKAGA + Y N++ +G
Sbjct: 243 TRVKVVKNKVAPPFRQVDFQILYGEGISKESELIELGVKHKLISKAGAWYAYQNEKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTE 345
K ++L +N + + LR++L+ P++A+T E E
Sbjct: 303 KTNAMKWLKDNPEQAKFIESTLRDELLA---HPESAITAEVENE 343
>gi|421097569|ref|ZP_15558254.1| RecA protein [Leptospira borgpetersenii str. 200901122]
gi|410799396|gb|EKS01471.1| RecA protein [Leptospira borgpetersenii str. 200901122]
Length = 403
Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust.
Identities = 173/313 (55%), Positives = 240/313 (76%), Gaps = 3/313 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K LA++QA++QI FGKG+IM LG + + V V+ +GS LDIALG GG P GR+VEI
Sbjct: 58 KKLAIEQAMNQIEKQFGKGAIMKLGSDTSKQTVQVIPSGSLDLDIALGIGGYPIGRIVEI 117
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ L IAEAQ++GG FIDAEHALDPS A+ +GV + LL++QPD GE+
Sbjct: 118 YGPESSGKTTITLSAIAEAQKRGGVAAFIDAEHALDPSYAKKLGVNIDELLVSQPDNGEE 177
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + ++L+RS ++D++V+DSVAALVPK E++G+MGD+HM +QARLMSQALRKL+ +++
Sbjct: 178 ALEICESLVRSNAIDLIVIDSVAALVPKAEIEGDMGDSHMGLQARLMSQALRKLTGTIAK 237
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+T++IFINQ+R K+ FG P E T GGNALKFY S+RL+I++I +K+ EE++G+++
Sbjct: 238 SKTVVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYCSIRLDIRKIETIKEKEESVGNRV 295
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK APPFK A+F++ F GISRE ++DL +KH KAGA ++YN +GK
Sbjct: 296 RVKVVKNKCAPPFKQAEFDIIFNAGISREGSLVDLGVKHDIIHKAGAWYSYNTEKIGQGK 355
Query: 303 EAFKQFLVENESV 315
EA K++L N +
Sbjct: 356 EAAKEYLKNNPEI 368
>gi|350544718|ref|ZP_08914281.1| RecA protein [Candidatus Burkholderia kirkii UZHbot1]
gi|350527506|emb|CCD37967.1| RecA protein [Candidatus Burkholderia kirkii UZHbot1]
Length = 356
Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/329 (56%), Positives = 240/329 (72%), Gaps = 3/329 (0%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVV 61
++K AL AL QI FGKGSIM LG + VVSTGS LDIALG GGLP+GRVV
Sbjct: 13 AEKSKALAAALSQIEKQFGKGSIMRLGAGEAVEDIQVVSTGSLGLDIALGVGGLPRGRVV 72
Query: 62 EIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCG 121
EIYGPE+SGKTTL L VIAE Q+ GG FIDAEHALD A +GV LL++QPD G
Sbjct: 73 EIYGPESSGKTTLTLQVIAEMQKLGGTAAFIDAEHALDVQYAGKLGVNVPELLISQPDTG 132
Query: 122 EQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSL 181
EQAL + D L+RSGS+D++V+DSVAALVPK E++GEMGD+ +QARLMSQALRKL+ ++
Sbjct: 133 EQALEIADALVRSGSIDMIVIDSVAALVPKAEIEGEMGDSLPGLQARLMSQALRKLTGTI 192
Query: 182 SLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGS 241
+ ++IFINQ+R K+ FG P E T GGNALKFY+SVRL+I+RIG +KK E IG+
Sbjct: 193 KRTNCLVIFINQIRMKIGVM-FGNP-ETTTGGNALKFYSSVRLDIRRIGSIKKNNEVIGN 250
Query: 242 QIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFR 300
+ VK+VKNK++PPF+ A F++ + +GISR+ EIIDL ++ K KAGA ++YN DR +
Sbjct: 251 ETRVKVVKNKVSPPFREAIFDILYVEGISRQGEIIDLGVQAKLIDKAGAWYSYNGDRIGQ 310
Query: 301 GKEAFKQFLVENESVREELVIKLREKLVV 329
GK+ ++FL EN + E+ K+RE L V
Sbjct: 311 GKDNAREFLRENPDIAREIENKIRESLGV 339
>gi|395767195|ref|ZP_10447730.1| protein recA [Bartonella doshiae NCTC 12862]
gi|395414508|gb|EJF80950.1| protein recA [Bartonella doshiae NCTC 12862]
Length = 347
Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/324 (58%), Positives = 238/324 (73%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI SFGKGSIM LG+ + + TGS +LDIALG GGLPKGR+VEI
Sbjct: 3 KTKALDAALSQIERSFGKGSIMRLGQKEQVVEIETIPTGSLSLDIALGVGGLPKGRIVEI 62
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH IAEAQ+ GG C FIDAEHALDP A +GV ENL ++QPD GEQ
Sbjct: 63 YGPESSGKTTLALHAIAEAQKIGGICAFIDAEHALDPIYARKLGVDLENLFISQPDTGEQ 122
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + +TL+RSG+VDV+VVDSVAAL P+ E+DGEMGDA +QARLMS+ALRKL+ ++
Sbjct: 123 ALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDALPGLQARLMSKALRKLTAAIFR 182
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K + +G+Q
Sbjct: 183 SNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKDRDAIVGNQT 240
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G+GIS+ E+IDL +K K+GA F+YN + +G+
Sbjct: 241 RVKVVKNKLAPPFKQVEFDIIYGEGISKVGELIDLGVKVGIVEKSGAWFSYNSQRLGQGR 300
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E KQFL E+ + E+ LR+
Sbjct: 301 ENAKQFLREHAEIAAEIEAALRQN 324
>gi|423348923|ref|ZP_17326579.1| protein recA [Scardovia wiggsiae F0424]
gi|393703152|gb|EJD65353.1| protein recA [Scardovia wiggsiae F0424]
Length = 369
Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust.
Identities = 177/324 (54%), Positives = 244/324 (75%), Gaps = 4/324 (1%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVV 61
+++ AL AL Q+ +FGKGS M LG V V+ TGS ALD+ALG GGLP+GR++
Sbjct: 13 ARRQAALDTALAQVEKAFGKGSAMRLGDKPV-NQVEVIPTGSIALDLALGIGGLPRGRII 71
Query: 62 EIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCG 121
EI+GPE+SGKTT+ALH +A AQ+ GG FIDAEHALDP A +GV T++L+++QPD G
Sbjct: 72 EIFGPESSGKTTIALHAVANAQKNGGVAAFIDAEHALDPDYARKLGVDTDSLIISQPDNG 131
Query: 122 EQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSL 181
EQAL + D LIRSG++D++VVDSVAALVPK E+DGEMGD+H+ +QARLMSQALRK++ +L
Sbjct: 132 EQALEIADMLIRSGALDIIVVDSVAALVPKAEIDGEMGDSHVGLQARLMSQALRKMTGAL 191
Query: 182 SLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGS 241
S S T IFINQ+R K+ FG P E T GG ALKFY+SVRL+I+RI +K G+E +G+
Sbjct: 192 SQSNTTAIFINQLREKIGVM-FGNP-ETTTGGKALKFYSSVRLDIRRIQTLKNGDEAVGN 249
Query: 242 QIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFR 300
+ +K+VKNK+APPFK+A+F++ +G+G+SRE +ID+AL K+G+ FTY D+ +
Sbjct: 250 RTRIKVVKNKMAPPFKSAEFDILYGEGVSREGSLIDMALSAGIVKKSGSWFTYEGDQLGQ 309
Query: 301 GKEAFKQFLVENESVREELVIKLR 324
G+E +QFL +N + +E+ K++
Sbjct: 310 GREKVRQFLKDNPELADEIEGKVK 333
>gi|256832273|ref|YP_003161000.1| recA protein [Jonesia denitrificans DSM 20603]
gi|256685804|gb|ACV08697.1| recA protein [Jonesia denitrificans DSM 20603]
Length = 364
Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/332 (55%), Positives = 249/332 (75%), Gaps = 5/332 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
++ AL+ AL QI FGKGSIM LG P+ V ++ TGS ALD+ALG GGLP+GR+VE+
Sbjct: 7 REKALEAALGQIDRQFGKGSIMRLGDDNRPK-VDIIPTGSIALDVALGIGGLPRGRIVEV 65
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ALH +A AQ+ GG FIDAEHALDP A+ +GV T+ LL++QPD GEQ
Sbjct: 66 YGPESSGKTTVALHAVANAQKNGGIAAFIDAEHALDPVYAQKLGVDTDALLVSQPDTGEQ 125
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D LIRSG++D++VVDSVAALVPK E++GEMGD+H+ +QARLMSQALRK++ +LS
Sbjct: 126 ALEITDMLIRSGAIDLIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITGALST 185
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
+ T IFINQ+R K+ F FG P E T GG ALKFYASVR++I+RI +K+G E +G++
Sbjct: 186 TGTTAIFINQLREKIGVF-FGSP-ETTTGGKALKFYASVRMDIRRIETLKEGSEPVGNRT 243
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRGK 302
VK+VKNK+APPFK A+F++ +G GISRE +ID+ + + K+G+ FTY D+ +GK
Sbjct: 244 RVKVVKNKMAPPFKQAEFDILYGVGISREGSLIDMGVDNGIVRKSGSWFTYEGDQLGQGK 303
Query: 303 EAFKQFLVENESVREELVIKLREKL-VVDHKE 333
E ++FL +N + E+ ++ KL ++D E
Sbjct: 304 ENARKFLRDNPELAAEIERRIMVKLGIIDGPE 335
>gi|217035313|pdb|2ZR0|A Chain A, Msreca-Q196e Mutant
gi|217035315|pdb|2ZR9|A Chain A, Msreca Q196e Datp Form Iv
gi|217035316|pdb|2ZRA|A Chain A, Msreca Q196e Atpgs
gi|217035317|pdb|2ZRB|A Chain A, Msreca Q196e Form Ii'
Length = 349
Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust.
Identities = 177/325 (54%), Positives = 248/325 (76%), Gaps = 4/325 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
++ AL+ A+ QI +FGKGS+M LG V + + V+ TGS +LD+ALG GGLP+GRV+EI
Sbjct: 8 REKALELAMAQIDKNFGKGSVMRLGEEVR-QPISVIPTGSISLDVALGIGGLPRGRVIEI 66
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ALH +A AQ GG FIDAEHALDP A+ +GV T++LL++QPD GEQ
Sbjct: 67 YGPESSGKTTVALHAVANAQAAGGIAAFIDAEHALDPEYAKKLGVDTDSLLVSQPDTGEQ 126
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RSG++D++V+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ +L+
Sbjct: 127 ALEIADMLVRSGALDIIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTGALNN 186
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T IFIN++R K+ FG P E T GG ALKFYASVRL+++RI +K G + +G++
Sbjct: 187 SGTTAIFINELREKIGVM-FGSP-ETTTGGKALKFYASVRLDVRRIETLKDGTDAVGNRT 244
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK++PPFK A+F++ +G+GISRE +ID+ ++H F K+G+ FTY +GK
Sbjct: 245 RVKVVKNKVSPPFKQAEFDILYGQGISREGSLIDMGVEHGFIRKSGSWFTYEGEQLGQGK 304
Query: 303 EAFKQFLVENESVREELVIKLREKL 327
E ++FL+EN V E+ K++EKL
Sbjct: 305 ENARKFLLENTDVANEIEKKIKEKL 329
>gi|29829034|ref|NP_823668.1| recombinase A [Streptomyces avermitilis MA-4680]
gi|37537927|sp|Q82KB1.1|RECA_STRAW RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|29606140|dbj|BAC70203.1| putative recombination protein RecA [Streptomyces avermitilis
MA-4680]
Length = 377
Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/330 (55%), Positives = 249/330 (75%), Gaps = 6/330 (1%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLG-RSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
+ ++ AL AL QI FGKG++M LG R P + V+ TGS ALD+ALG GGLP+GRV
Sbjct: 4 TDREKALDAALAQIERQFGKGAVMRLGERPNEP--IEVIPTGSTALDVALGVGGLPRGRV 61
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
VE+YGPE+SGKTTL LH +A AQ+ GG F+DAEHALDP A+ +GV +NL+L+QPD
Sbjct: 62 VEVYGPESSGKTTLTLHAVANAQKAGGQVAFVDAEHALDPEYAKKLGVDIDNLILSQPDN 121
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL +VD L+RSG++D++V+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRK++ +
Sbjct: 122 GEQALEIVDMLVRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITSA 181
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
L+ S+T IFINQ+R K+ FG P E T GG ALKFYASVRL+I+RI +K G + +G
Sbjct: 182 LNQSKTTAIFINQLREKIGVM-FGSP-ETTTGGRALKFYASVRLDIRRIETLKDGTDAVG 239
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNF 299
++ VK+VKNK+APPFK A+F++ +G+GISRE +ID+ +++ F KAGA +TY D+
Sbjct: 240 NRTRVKVVKNKVAPPFKQAEFDILYGQGISREGGLIDMGVENGFVRKAGAWYTYEGDQLG 299
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVV 329
+GKE + FL +N + E+ K++EKL V
Sbjct: 300 QGKENARNFLKDNPDLANEIEKKIKEKLGV 329
>gi|253573598|ref|ZP_04850941.1| recA protein [Paenibacillus sp. oral taxon 786 str. D14]
gi|251847126|gb|EES75131.1| recA protein [Paenibacillus sp. oral taxon 786 str. D14]
Length = 353
Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/326 (55%), Positives = 244/326 (74%), Gaps = 4/326 (1%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
MS + AL+ AL QI FGKGSIM LG S T V +V +GS ALDIALGTGGLP+GR+
Sbjct: 1 MSDRKAALEMALRQIEKQFGKGSIMKLGES-THMQVEIVPSGSIALDIALGTGGLPRGRI 59
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+E+YGPE+SGKTT+ALH IAE Q+ GG FIDAEHALDPS A +GV + LLL+QPD
Sbjct: 60 IEVYGPESSGKTTVALHAIAEVQKIGGQAAFIDAEHALDPSYASKLGVNIDELLLSQPDT 119
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + + L+RSG+VD++V+DSVAALVPK E++GEMGD+H+ +QARLMSQALRKLS +
Sbjct: 120 GEQALEIAEALVRSGAVDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLSGA 179
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
+S S+TI IFINQ+R K+ FG P E T GG ALKFY+++RL+++R+ +K G + +G
Sbjct: 180 ISKSKTIAIFINQLREKVGVM-FGNP-ETTPGGRALKFYSTIRLDVRRVETIKMGNDMVG 237
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNF 299
++ +K+VKNK+APPFK A+ ++ +G+GIS+E IIDL + K+GA ++Y +R
Sbjct: 238 NRTRIKVVKNKVAPPFKQAEIDIMYGEGISKEGSIIDLGTELDIVDKSGAWYSYAGERLG 297
Query: 300 RGKEAFKQFLVENESVREELVIKLRE 325
+G+E KQFL E+ + + K+RE
Sbjct: 298 QGRENAKQFLKEHPEIANAIEQKIRE 323
>gi|323141085|ref|ZP_08075990.1| RecA protein [Phascolarctobacterium succinatutens YIT 12067]
gi|322414461|gb|EFY05275.1| RecA protein [Phascolarctobacterium succinatutens YIT 12067]
Length = 350
Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust.
Identities = 179/335 (53%), Positives = 246/335 (73%), Gaps = 5/335 (1%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVV 61
+ K AL A+ QI FGKGSIM LG + ++ V+ TG+ +LDIALG GG+P+GRV+
Sbjct: 3 ADKKKALDMAMHQIEKDFGKGSIMMLGEASAKMNIEVIPTGALSLDIALGVGGIPRGRVI 62
Query: 62 EIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCG 121
EIYGPE+SGKTT+ALH+IAEAQ+ GGY FIDAEHALDP A +GV ++LL++QPD G
Sbjct: 63 EIYGPESSGKTTVALHMIAEAQKMGGYAAFIDAEHALDPEYARHLGVDIDDLLISQPDNG 122
Query: 122 EQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSL 181
EQAL + D L+RSG++D++V+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRKL+ +
Sbjct: 123 EQALEIADALVRSGAIDIIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLTGLI 182
Query: 182 SLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGS 241
S S+ IFINQ+R K+ FG P E T GG ALKFY++VR++++RI +K G + IGS
Sbjct: 183 SKSKCATIFINQIREKVGVM-FGNP-ETTTGGRALKFYSTVRMDVRRIDTLKNGNDVIGS 240
Query: 242 QIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYND-RNFR 300
+ VK+VKNK+APPF+ A+F++ +GKGIS E ++DL +K+GA ++Y D R +
Sbjct: 241 RTRVKVVKNKVAPPFRQAEFDIMYGKGISHEGCLVDLGADLDIINKSGAWYSYGDIRLGQ 300
Query: 301 GKEAFKQFLVENESVREELVIKLREKLVV--DHKE 333
GKE K FL EN + +E+ K+R + D+KE
Sbjct: 301 GKEKVKDFLRENPEIAQEIEAKIRAVTIAKSDNKE 335
>gi|410866082|ref|YP_006980693.1| Protein RecA [Propionibacterium acidipropionici ATCC 4875]
gi|410822723|gb|AFV89338.1| Protein RecA [Propionibacterium acidipropionici ATCC 4875]
Length = 349
Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust.
Identities = 180/347 (51%), Positives = 254/347 (73%), Gaps = 5/347 (1%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
++ ++ AL+ A++ I +G GSIM LG T + +P + TGS ALD+ALG GGLP+GR+
Sbjct: 3 VADREKALKDAMEHIDKQYGNGSIMRLGDRETVK-IPAIPTGSVALDVALGVGGLPRGRI 61
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
VEIYGPE+ GKTTLALH IA AQ +GG C FIDAEHALDP A+ +GV T+NLL++QPD
Sbjct: 62 VEIYGPESGGKTTLALHAIANAQAEGGICAFIDAEHALDPEYAKNLGVDTDNLLISQPDN 121
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + DTL+RSG+++++V+DSVAAL PK E++G+MGD+H+ +QARLMSQALRK++ +
Sbjct: 122 GEQALEIADTLVRSGALELIVIDSVAALTPKAEIEGDMGDSHVGLQARLMSQALRKMTGA 181
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
LS + T IFINQ+R K+ FG P E T GG ALKFY+SVRL+++RI +K G+E +G
Sbjct: 182 LSGAGTTAIFINQLREKIGVM-FGNP-ETTTGGRALKFYSSVRLDVRRIQTLKDGDEMVG 239
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRN-- 298
++ VK+VKNK+APPFK A+F++ +G+GISRE +ID+ + K+G+ +TYN+
Sbjct: 240 NRTRVKVVKNKVAPPFKQAEFDILYGQGISREGSLIDMGVDCAIIRKSGSWYTYNETEQL 299
Query: 299 FRGKEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTE 345
+GKE ++FL EN V E+ K+R ++ +D + A D + E
Sbjct: 300 GQGKENVRKFLKENTEVAAEIESKIRIRMGLDTDDEVPAEVDPKTGE 346
>gi|408791197|ref|ZP_11202807.1| RecA protein [Leptospira meyeri serovar Hardjo str. Went 5]
gi|193806432|sp|P0C7T0.1|RECA_LEPME RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|1049197|gb|AAC43586.1| RecA [Leptospira biflexa]
gi|408462607|gb|EKJ86332.1| RecA protein [Leptospira meyeri serovar Hardjo str. Went 5]
gi|1586560|prf||2204257A recA gene
Length = 387
Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust.
Identities = 184/352 (52%), Positives = 250/352 (71%), Gaps = 11/352 (3%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
A+ AL QI FGKGSIM LG + VVSTGS LDIALG GG P GR+VEIYGP
Sbjct: 20 AIDAALGQIEKQFGKGSIMRLGADTRMAEMNVVSTGSLDLDIALGIGGFPSGRIVEIYGP 79
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTTL L IAE Q++GG FIDAEHALDPS A+ +GV ++LL+AQPD GE+AL
Sbjct: 80 ESSGKTTLTLSAIAETQKKGGIAAFIDAEHALDPSYAKKLGVNVDDLLVAQPDNGEEALE 139
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ ++L+RS ++D++V+DSVAALVPK E++G+MGD+HM +QARLMSQALRKL+ ++S S T
Sbjct: 140 ICESLVRSNAIDLIVIDSVAALVPKAEIEGDMGDSHMGLQARLMSQALRKLTGTISKSNT 199
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
+IFINQ+R K+ FG P E T GGNALKFYAS+RL+I+RI +K+ EE +G+++ VK
Sbjct: 200 TVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASIRLDIRRIETLKEKEEPVGNRVRVK 257
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGKEAF 305
+VKNK APPF+ A+F++ + GI+RES +IDLA++H +KAG+ ++Y +GKE
Sbjct: 258 VVKNKCAPPFRQAEFDIMYANGINRESSLIDLAVRHDLVAKAGSWYSYGGEKIGQGKEQV 317
Query: 306 KQFLVEN--------ESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETVS 349
K F +EN VR+ + L ++ + +E ++ D T+ET S
Sbjct: 318 KNFFLENPDIAFKIENQVRDLNSLPLMDQSKIQTREVKSIERDPKETKETKS 369
>gi|410623642|ref|ZP_11334454.1| recombination protein RecA [Glaciecola pallidula DSM 14239 = ACAM
615]
gi|410156858|dbj|GAC29828.1| recombination protein RecA [Glaciecola pallidula DSM 14239 = ACAM
615]
Length = 380
Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust.
Identities = 184/342 (53%), Positives = 251/342 (73%), Gaps = 6/342 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI FGKG+IM LG + + +STGS +DIALG GGLP GRVVE+
Sbjct: 30 KSRALEAALGQIEKQFGKGAIMRLGDN-QALDIEAISTGSLTIDIALGIGGLPCGRVVEV 88
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIAEAQ++G C F+DAEHALDP AE +GV +LL++QPD GEQ
Sbjct: 89 YGPESSGKTTLTLQVIAEAQKKGKVCAFVDAEHALDPIYAEKLGVNINDLLVSQPDTGEQ 148
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RS +VDVVV+DSVAAL P+ E++G+MGD+H+ +QARLMSQALRKL+ ++
Sbjct: 149 ALEICDMLVRSNAVDVVVIDSVAALTPRAEIEGDMGDSHVGLQARLMSQALRKLTANIKR 208
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K G+E +G++
Sbjct: 209 SNTLVIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAIKDGDEVVGNET 266
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGK 302
VK+VKNK+APPFK A+F++ +G GI +++E+IDL +K K KAGA ++Y +R +GK
Sbjct: 267 RVKVVKNKVAPPFKQAEFQIMYGAGICKQAELIDLGVKQKLVEKAGAWYSYKGERIGQGK 326
Query: 303 EAFKQFLVENESVREELVIKLREKLVV--DHKEPQTAVTDED 342
+L E+ ++ +E+ +R +L++ K AVT++D
Sbjct: 327 ANVVTYLKEHVAMADEIEALIRAELLMPKTKKADAVAVTEDD 368
>gi|374286980|ref|YP_005034065.1| recombinase A [Bacteriovorax marinus SJ]
gi|301165521|emb|CBW25092.1| recombinase A [Bacteriovorax marinus SJ]
Length = 374
Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust.
Identities = 180/326 (55%), Positives = 237/326 (72%), Gaps = 3/326 (0%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVV 61
+ K AL AL I FGKG+IM L VP +STG LD+ALG GG+P+GR++
Sbjct: 12 ANKTKALDLALATIEKQFGKGAIMKLDSEKKLEKVPAISTGCLGLDLALGVGGIPQGRII 71
Query: 62 EIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCG 121
E+YGPE+SGKTTL LH AE Q+ GG FIDAEHALD AE +GV N L++QPD G
Sbjct: 72 EVYGPESSGKTTLTLHAAAECQKAGGTVAFIDAEHALDTYYAEKLGVDVPNTLISQPDSG 131
Query: 122 EQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSL 181
EQAL + D L+RSG+VD+++VDSVAAL P+ EL+G+MGD+HM +QARLMSQALRKL+ S+
Sbjct: 132 EQALEIADMLVRSGAVDLLIVDSVAALTPRAELEGDMGDSHMGLQARLMSQALRKLTGSI 191
Query: 182 SLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGS 241
S S T +IFINQ+R K+ FG P E T GGNALKFYASVR++I+RIG +K G+E +GS
Sbjct: 192 SRSNTTVIFINQLRMKIGVM-FGNP-ETTTGGNALKFYASVRVDIRRIGAIKNGDEVVGS 249
Query: 242 QIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-R 300
+ VKIVKNK+APPFK +F++ +G+GIS+ +++DLA++H KAGA F+YN+ +
Sbjct: 250 RTRVKIVKNKVAPPFKQIEFDIMYGEGISKTGDVLDLAVEHGVVEKAGAWFSYNNAKIGQ 309
Query: 301 GKEAFKQFLVENESVREELVIKLREK 326
G+E K FL EN+ + EE+ K+ K
Sbjct: 310 GRENSKNFLSENKDIFEEIRNKVLAK 335
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.132 0.362
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,293,748,403
Number of Sequences: 23463169
Number of extensions: 215042370
Number of successful extensions: 946982
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9262
Number of HSP's successfully gapped in prelim test: 2755
Number of HSP's that attempted gapping in prelim test: 923955
Number of HSP's gapped (non-prelim): 12492
length of query: 366
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 222
effective length of database: 8,980,499,031
effective search space: 1993670784882
effective search space used: 1993670784882
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 77 (34.3 bits)