BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017792
(366 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZUP2|RECA3_ARATH DNA repair protein recA homolog 3, mitochondrial OS=Arabidopsis
thaliana GN=At2g19490 PE=2 SV=2
Length = 430
Score = 557 bits (1436), Expect = e-158, Method: Compositional matrix adjust.
Identities = 279/361 (77%), Positives = 323/361 (89%), Gaps = 1/361 (0%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
MSKK++ALQQALDQITSSFGKGSIM+LGR+V+PR+VPV STGSFALD+ALG GGLPKGRV
Sbjct: 55 MSKKEIALQQALDQITSSFGKGSIMYLGRAVSPRNVPVFSTGSFALDVALGVGGLPKGRV 114
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
VEIYGPEASGKTTLALHVIAEAQ+QGG CVF+DAEHALD SLA+ IGV TENLLL+QPDC
Sbjct: 115 VEIYGPEASGKTTLALHVIAEAQKQGGTCVFVDAEHALDSSLAKAIGVNTENLLLSQPDC 174
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQALSLVDTLIRSGSVDV+VVDSVAALVPKGEL+GEMGDAHMAMQARLMSQALRKLSHS
Sbjct: 175 GEQALSLVDTLIRSGSVDVIVVDSVAALVPKGELEGEMGDAHMAMQARLMSQALRKLSHS 234
Query: 181 LSLSQTILIFINQVRAKLSTF-GFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETI 239
LSLSQT+LIFINQVR+KLSTF GFGGPTEVTCGGNALKFYAS+RLNIKRIGL+KKGEET
Sbjct: 235 LSLSQTLLIFINQVRSKLSTFGGFGGPTEVTCGGNALKFYASMRLNIKRIGLIKKGEETT 294
Query: 240 GSQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF 299
GSQ++VKIVKNKLAPPF+TAQFELEFGKGI + +EIIDL++KHKF +K G + N +N+
Sbjct: 295 GSQVSVKIVKNKLAPPFRTAQFELEFGKGICKITEIIDLSIKHKFIAKNGTFYNLNGKNY 354
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETVSTISPDSTDEE 359
GKEA K+FL +NES +EEL+ KL++KL+ D + ++ + + +SPD+TD+E
Sbjct: 355 HGKEALKRFLKQNESDQEELMKKLQDKLIADEAADKETESESEEEDSLRVVVSPDNTDDE 414
Query: 360 A 360
+
Sbjct: 415 S 415
>sp|Q31F89|RECA_THICR Protein RecA OS=Thiomicrospira crunogena (strain XCL-2) GN=recA
PE=3 SV=1
Length = 347
Score = 397 bits (1019), Expect = e-110, Method: Compositional matrix adjust.
Identities = 191/339 (56%), Positives = 254/339 (74%), Gaps = 5/339 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI FGKGSIM +G R + VSTGS LD+ALG GGLP+GRVVEI
Sbjct: 5 KKKALEAALGQIEKQFGKGSIMRMGDKGAIRDIDSVSTGSLGLDVALGIGGLPRGRVVEI 64
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL LH IAE Q+ GG F+DAEHALDP AE +GV +NLL++QPD GEQ
Sbjct: 65 YGPESSGKTTLTLHAIAEMQKMGGTAAFVDAEHALDPIYAEKLGVDIDNLLVSQPDTGEQ 124
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D+L+RSG+VD+V+VDSVAAL PK E++G+MGD+HM +QARLMSQALRKL+ ++
Sbjct: 125 ALEITDSLVRSGAVDIVIVDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTANIKR 184
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
+ T++IFINQ+R K+ FG P E T GGNALKFY+SVRL+I+RIG +KKG+E +G++
Sbjct: 185 TNTLVIFINQIRMKIGVM-FGNP-ETTTGGNALKFYSSVRLDIRRIGAIKKGDEILGNET 242
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK++PPFK +FE+ +G+GISRE E+IDL +K K KAGA ++Y + +GK
Sbjct: 243 RVKVVKNKVSPPFKQVEFEILYGQGISREGEVIDLGVKEKLIEKAGAWYSYQGQKIGQGK 302
Query: 303 EAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDE 341
+ +QFL +N + E L ++++E+L+ P+ TDE
Sbjct: 303 DNVRQFLKDNPDIYETLQVQIKERLMPKPNAPKA--TDE 339
>sp|Q83CQ4|RECA_COXBU Protein RecA OS=Coxiella burnetii (strain RSA 493 / Nine Mile phase
I) GN=recA PE=3 SV=1
Length = 343
Score = 392 bits (1008), Expect = e-108, Method: Compositional matrix adjust.
Identities = 193/346 (55%), Positives = 256/346 (73%), Gaps = 4/346 (1%)
Query: 1 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 60
M + AL AL QI FGKGS+M LG + V+STGS LDIALG GGLP+GR+
Sbjct: 1 MDNRSNALNAALSQIERQFGKGSVMRLGDPGLIPDIDVISTGSLGLDIALGVGGLPRGRI 60
Query: 61 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 120
+EIYGPEASGKTTLAL IA QR GG F+DAEHALD A +GVK E+LL++QPD
Sbjct: 61 IEIYGPEASGKTTLALQTIASCQRMGGTAAFVDAEHALDAIYAGKLGVKVEDLLVSQPDT 120
Query: 121 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 180
GEQAL + D L+RSG+VD++V+DSVAAL PK E++G+MGD+HM +QARLMSQALRKL+ +
Sbjct: 121 GEQALEITDMLVRSGAVDLIVIDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTAN 180
Query: 181 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 240
+ S T++IFINQ+R K+ FG P E T GGNALKFY+SVRL+I+RIG +KKGEE +G
Sbjct: 181 IKKSNTLVIFINQIRMKIGVM-FGNP-ETTTGGNALKFYSSVRLDIRRIGAIKKGEEILG 238
Query: 241 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNF 299
S+ VK+VKNK+APPF+ +F++ +G GISRESE+IDL +K++ KAGA ++YN +R
Sbjct: 239 SETRVKVVKNKVAPPFRQVEFDILYGLGISRESELIDLGVKNELVEKAGAWYSYNGERIG 298
Query: 300 RGKEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTE 345
+GKE +QF +EN + E+ +LREKL + H++ + + ++ E
Sbjct: 299 QGKENVRQFFLENPKIAGEIETRLREKL-LPHRQGEKIAEEVNAAE 343
>sp|B9JFS7|RECA_AGRRK Protein RecA OS=Agrobacterium radiobacter (strain K84 / ATCC
BAA-868) GN=recA PE=3 SV=1
Length = 361
Score = 388 bits (997), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/362 (54%), Positives = 257/362 (70%), Gaps = 20/362 (5%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI SFGKGSIM LG + + VSTGS +LDIALG GGLPKGR+VEI
Sbjct: 16 KSKALEAALSQIERSFGKGSIMKLGSNENVVEIETVSTGSLSLDIALGIGGLPKGRIVEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL IAEAQ++GG C F+DAEHALDP A +GV +NLL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 136 ALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+ EE +G+Q
Sbjct: 196 SNTMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAVKEREEVVGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 254 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK--LVVDHKEPQTAVTDEDSTEETVSTISPDSTDEEA 360
E K FL +N + E+ + LR+ L+ D + PD+ D EA
Sbjct: 314 ENAKLFLRDNPDLAREIELSLRQNAGLIADR---------------FLQNGGPDADDGEA 358
Query: 361 AA 362
AA
Sbjct: 359 AA 360
>sp|Q11IW6|RECA_MESSB Protein RecA OS=Mesorhizobium sp. (strain BNC1) GN=recA PE=3 SV=1
Length = 360
Score = 388 bits (996), Expect = e-107, Method: Compositional matrix adjust.
Identities = 191/324 (58%), Positives = 244/324 (75%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI +FGKGSIM LG + + +STGS LDIALG GGLP+GR++EI
Sbjct: 16 KSKALDAALSQIERAFGKGSIMRLGANDKVVEIETISTGSLGLDIALGVGGLPRGRIIEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH +AEAQ++GG C FIDAEHALDP A +GV ENLL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALHTVAEAQKKGGICGFIDAEHALDPVYARKLGVDLENLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+VVDSVAAL P+ E++GEMG++ MQARLMSQALRKL+ S+S
Sbjct: 136 ALEICDTLVRSGAVDVIVVDSVAALTPRAEIEGEMGESLPGMQARLMSQALRKLTASISR 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK EET+G+Q
Sbjct: 196 SNTMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSVKDREETVGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E++DL +K KAGA F+YN + +G+
Sbjct: 254 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGVVEKAGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E K FL +N V E+ + LR+
Sbjct: 314 ENAKLFLRDNPEVAREIELALRQN 337
>sp|Q5ZUJ7|RECA_LEGPH Protein RecA OS=Legionella pneumophila subsp. pneumophila (strain
Philadelphia 1 / ATCC 33152 / DSM 7513) GN=recA PE=3
SV=1
Length = 348
Score = 388 bits (996), Expect = e-107, Method: Compositional matrix adjust.
Identities = 189/326 (57%), Positives = 243/326 (74%), Gaps = 3/326 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGS+M +G S R + +STGS LDIALG GGLPKGR+VEI
Sbjct: 5 KQKALSAALSQIERQFGKGSVMRMGDSTVSRDIEAISTGSLGLDIALGIGGLPKGRIVEI 64
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIAE Q+ GG FIDAEHALDPS A+ +GVK + LL++QPD GEQ
Sbjct: 65 YGPESSGKTTLTLQVIAECQKMGGTAAFIDAEHALDPSYAQKLGVKVDELLVSQPDTGEQ 124
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RS +VDVV++DSVAAL PK E++GEMGD+H+ +QARLMSQALRKL+ ++
Sbjct: 125 ALEITDMLVRSAAVDVVIIDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKR 184
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +KKGEE +GS+
Sbjct: 185 SNTLVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKKGEEILGSET 242
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ + +GISRESEII+L ++ K+GA ++Y +GK
Sbjct: 243 RVKVVKNKVAPPFKMTEFDILYNEGISRESEIINLGVQLNLIEKSGAWYSYKQEKIGQGK 302
Query: 303 EAFKQFLVENESVREELVIKLREKLV 328
E + +L EN V EL ++R +L+
Sbjct: 303 ENVRLYLKENPQVAAELEQQIRTELL 328
>sp|A5ICV8|RECA_LEGPC Protein RecA OS=Legionella pneumophila (strain Corby) GN=recA PE=3
SV=1
Length = 348
Score = 388 bits (996), Expect = e-107, Method: Compositional matrix adjust.
Identities = 189/326 (57%), Positives = 243/326 (74%), Gaps = 3/326 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGS+M +G S R + +STGS LDIALG GGLPKGR+VEI
Sbjct: 5 KQKALSAALSQIERQFGKGSVMRMGDSTVSRDIEAISTGSLGLDIALGIGGLPKGRIVEI 64
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIAE Q+ GG FIDAEHALDPS A+ +GVK + LL++QPD GEQ
Sbjct: 65 YGPESSGKTTLTLQVIAECQKMGGTAAFIDAEHALDPSYAQKLGVKVDELLVSQPDTGEQ 124
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RS +VDVV++DSVAAL PK E++GEMGD+H+ +QARLMSQALRKL+ ++
Sbjct: 125 ALEITDMLVRSAAVDVVIIDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKR 184
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +KKGEE +GS+
Sbjct: 185 SNTLVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKKGEEILGSET 242
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ + +GISRESEII+L ++ K+GA ++Y +GK
Sbjct: 243 RVKVVKNKVAPPFKMTEFDILYNEGISRESEIINLGVQLNLIEKSGAWYSYKQEKIGQGK 302
Query: 303 EAFKQFLVENESVREELVIKLREKLV 328
E + +L EN V EL ++R +L+
Sbjct: 303 ENVRLYLKENPQVAAELEQQIRTELL 328
>sp|Q5X4B5|RECA_LEGPA Protein RecA OS=Legionella pneumophila (strain Paris) GN=recA PE=3
SV=1
Length = 348
Score = 388 bits (996), Expect = e-107, Method: Compositional matrix adjust.
Identities = 189/326 (57%), Positives = 243/326 (74%), Gaps = 3/326 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGS+M +G S R + +STGS LDIALG GGLPKGR+VEI
Sbjct: 5 KQKALSAALSQIERQFGKGSVMRMGDSTVSRDIEAISTGSLGLDIALGIGGLPKGRIVEI 64
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIAE Q+ GG FIDAEHALDPS A+ +GVK + LL++QPD GEQ
Sbjct: 65 YGPESSGKTTLTLQVIAECQKMGGTAAFIDAEHALDPSYAQKLGVKVDELLVSQPDTGEQ 124
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RS +VDVV++DSVAAL PK E++GEMGD+H+ +QARLMSQALRKL+ ++
Sbjct: 125 ALEITDMLVRSAAVDVVIIDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKR 184
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +KKGEE +GS+
Sbjct: 185 SNTLVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKKGEEILGSET 242
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ + +GISRESEII+L ++ K+GA ++Y +GK
Sbjct: 243 RVKVVKNKVAPPFKMTEFDILYNEGISRESEIINLGVQLNLIEKSGAWYSYKQEKIGQGK 302
Query: 303 EAFKQFLVENESVREELVIKLREKLV 328
E + +L EN V EL ++R +L+
Sbjct: 303 ENVRLYLKENPQVAAELEQQIRTELL 328
>sp|Q5WVQ0|RECA_LEGPL Protein RecA OS=Legionella pneumophila (strain Lens) GN=recA PE=3
SV=1
Length = 348
Score = 387 bits (995), Expect = e-107, Method: Compositional matrix adjust.
Identities = 189/326 (57%), Positives = 243/326 (74%), Gaps = 3/326 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGS+M +G S R + +STGS LDIALG GGLPKGR+VEI
Sbjct: 5 KQKALSAALSQIERQFGKGSVMRMGDSTVSRDIEAISTGSLGLDIALGIGGLPKGRIVEI 64
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIAE Q+ GG FIDAEHALDPS A+ +GVK + LL++QPD GEQ
Sbjct: 65 YGPESSGKTTLTLQVIAECQKMGGTAAFIDAEHALDPSYAQKLGVKVDELLVSQPDTGEQ 124
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RS +VDVV++DSVAAL PK E++GEMGD+H+ +QARLMSQALRKL+ ++
Sbjct: 125 ALEITDMLVRSAAVDVVIIDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKR 184
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +KKGEE +GS+
Sbjct: 185 SNTLVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKKGEEILGSET 242
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ + +GISRESEII+L ++ K+GA ++Y +GK
Sbjct: 243 RVKVVKNKVAPPFKMTEFDILYNEGISRESEIINLGVQLNLIEKSGAWYSYKQEKIGQGK 302
Query: 303 EAFKQFLVENESVREELVIKLREKLV 328
E + +L EN V EL ++R +L+
Sbjct: 303 ENVRLYLKENPQVAAELEQQIRTELL 328
>sp|Q2RQH9|RECA_RHORT Protein RecA OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB
8255) GN=recA PE=3 SV=1
Length = 366
Score = 387 bits (995), Expect = e-107, Method: Compositional matrix adjust.
Identities = 187/317 (58%), Positives = 247/317 (77%), Gaps = 3/317 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ A+ QI +FGKGSIM LG+ + + +STGS LDIALG GGLP+GR+VEI
Sbjct: 16 KQKALEAAVGQIERAFGKGSIMKLGQRGSVVDIESISTGSLGLDIALGIGGLPRGRIVEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALHV+AEAQ++GG C F+DAEHA DP A +GV ++LL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALHVVAEAQKKGGQCAFVDAEHAFDPLYARKLGVSLDDLLVSQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+V+DSVAALVPK EL+G+MGD+H+ +QARLMSQALRKL+ ++S
Sbjct: 136 ALEIADTLVRSGAIDVLVIDSVAALVPKAELEGDMGDSHVGLQARLMSQALRKLTGTVSR 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK EE +G+Q
Sbjct: 196 SNTLIIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKDKEEVVGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYND-RNFRGK 302
VK+VKNK+APPFK +F++ +G+GIS+ E++DL +K K+GA F+YN R +G+
Sbjct: 254 RVKVVKNKVAPPFKVVEFDIMYGEGISKLGEMLDLGVKANIIEKSGAWFSYNSTRIGQGR 313
Query: 303 EAFKQFLVENESVREEL 319
E KQFL +N ++ EE+
Sbjct: 314 ENAKQFLRDNPAMAEEI 330
>sp|Q1MFZ8|RECA_RHIL3 Protein RecA OS=Rhizobium leguminosarum bv. viciae (strain 3841)
GN=recA PE=3 SV=1
Length = 364
Score = 387 bits (995), Expect = e-107, Method: Compositional matrix adjust.
Identities = 190/331 (57%), Positives = 247/331 (74%), Gaps = 5/331 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI SFGKGSIM LG + + +STGS LDIALG GGLP+GR++EI
Sbjct: 16 KSKALEAALSQIERSFGKGSIMKLGSNENVVEIETISTGSLGLDIALGVGGLPRGRIIEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL IAEAQ++GG C F+DAEHALDP A +GV +NLL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 136 ALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+ EE IG+Q
Sbjct: 196 SNTMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAVKEREEVIGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 254 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK--LVVDH 331
E K FL +N + E+ + LR+ L+ D
Sbjct: 314 ENAKTFLRDNPDLAREIELSLRQNAGLIADR 344
>sp|Q05358|RECA_LEGPN Protein RecA OS=Legionella pneumophila GN=recA PE=3 SV=1
Length = 348
Score = 387 bits (993), Expect = e-106, Method: Compositional matrix adjust.
Identities = 188/326 (57%), Positives = 243/326 (74%), Gaps = 3/326 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL A+ QI FGKGS+M +G S R + +STGS LDIALG GGLPKGR+VEI
Sbjct: 5 KQKALSAAVSQIERQFGKGSVMRMGDSTVSRDIEAISTGSLGLDIALGIGGLPKGRIVEI 64
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIAE Q+ GG FIDAEHALDPS A+ +GVK + LL++QPD GEQ
Sbjct: 65 YGPESSGKTTLTLQVIAECQKMGGTAAFIDAEHALDPSYAQKLGVKVDELLVSQPDTGEQ 124
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RS +VDVV++DSVAAL PK E++GEMGD+H+ +QARLMSQALRKL+ ++
Sbjct: 125 ALEITDMLVRSAAVDVVIIDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKR 184
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +KKGEE +GS+
Sbjct: 185 SNTLVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKKGEEILGSET 242
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ + +GISRESEII+L ++ K+GA ++Y +GK
Sbjct: 243 RVKVVKNKVAPPFKMTEFDILYNEGISRESEIINLGVQLNLIEKSGAWYSYKQEKIGQGK 302
Query: 303 EAFKQFLVENESVREELVIKLREKLV 328
E + +L EN V EL ++R +L+
Sbjct: 303 ENVRLYLKENPQVAAELEQQIRTELL 328
>sp|B5ZRG2|RECA_RHILW Protein RecA OS=Rhizobium leguminosarum bv. trifolii (strain
WSM2304) GN=recA PE=3 SV=1
Length = 362
Score = 386 bits (992), Expect = e-106, Method: Compositional matrix adjust.
Identities = 190/331 (57%), Positives = 247/331 (74%), Gaps = 5/331 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI SFGKGSIM LG + + +STGS LDIALG GGLP+GR++EI
Sbjct: 16 KSKALEAALSQIERSFGKGSIMKLGSNENVVEIETISTGSLGLDIALGVGGLPRGRIIEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL IAEAQ++GG C F+DAEHALDP A +GV +NLL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 136 ALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+ EE IG+Q
Sbjct: 196 SNTMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAVKEREEVIGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 254 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK--LVVDH 331
E K FL +N + E+ + LR+ L+ D
Sbjct: 314 ENAKTFLRDNPDLAREIELSLRQNAGLIADR 344
>sp|B9JX56|RECA_AGRVS Protein RecA OS=Agrobacterium vitis (strain S4 / ATCC BAA-846)
GN=recA PE=3 SV=1
Length = 362
Score = 386 bits (992), Expect = e-106, Method: Compositional matrix adjust.
Identities = 190/324 (58%), Positives = 244/324 (75%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI SFGKGSIM LG + V VSTGS +LDIALG GGLPKGR++EI
Sbjct: 16 KSKALEAALSQIERSFGKGSIMKLGANEKIVEVETVSTGSLSLDIALGIGGLPKGRIIEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL IAEAQ++GG C F+DAEHALDP A +GV +NLL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALQTIAEAQKKGGVCAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+V+DSVAAL PK E++GEMGD+ MQARLMSQALRKL+ S+S
Sbjct: 136 ALEITDTLVRSGAIDVLVIDSVAALTPKAEIEGEMGDSLPGMQARLMSQALRKLTGSISR 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S +++FINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK EE +G+Q
Sbjct: 196 SNCMVVFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAVKDREEIVGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E++DL +K KAGA F+YN + +G+
Sbjct: 254 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKAGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E K FL +N +V +E+ LR+
Sbjct: 314 ENAKIFLRDNPAVADEIETALRQN 337
>sp|A6X0E8|RECA_OCHA4 Protein RecA OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882
/ NCTC 12168) GN=recA PE=3 SV=1
Length = 361
Score = 386 bits (991), Expect = e-106, Method: Compositional matrix adjust.
Identities = 188/324 (58%), Positives = 243/324 (75%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI +FGKGSIM LG++ + V TGS +LDIALG GGLPKGR+VEI
Sbjct: 16 KTKALDAALSQIERAFGKGSIMRLGKNAPVIEIETVPTGSLSLDIALGVGGLPKGRIVEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH IAEAQ++GG C F+DAEHALDP A +GV ENLL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 136 ALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISR 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+ +E +G+Q
Sbjct: 196 SNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKERDEVVGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 254 RVKVVKNKLAPPFKQVEFDIMYGAGVSKTGELVDLGVKAGVVEKSGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E KQ+L +N V E+ LR+
Sbjct: 314 ENAKQYLKDNPEVAREIETTLRQN 337
>sp|P65976|RECA_BRUSU Protein RecA OS=Brucella suis biovar 1 (strain 1330) GN=recA PE=3
SV=1
Length = 361
Score = 385 bits (990), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/324 (58%), Positives = 244/324 (75%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI +FGKGSIM LG++ + VSTGS +LDIALG GGLPKGR+VEI
Sbjct: 16 KTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIVEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH IAEAQ++GG C F+DAEHALDP A +GV ENLL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 136 ALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSISR 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+ +E +G+Q
Sbjct: 196 SNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKERDEVVGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 254 RVKVVKNKLAPPFKQVEFDIMYGAGVSKVGELVDLGVKAGVVEKSGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E KQ+L +N V E+ LR+
Sbjct: 314 ENAKQYLKDNPEVAREIETTLRQN 337
>sp|P65975|RECA_BRUME Protein RecA OS=Brucella melitensis biotype 1 (strain 16M / ATCC
23456 / NCTC 10094) GN=recA PE=3 SV=1
Length = 361
Score = 385 bits (990), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/324 (58%), Positives = 244/324 (75%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI +FGKGSIM LG++ + VSTGS +LDIALG GGLPKGR+VEI
Sbjct: 16 KTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIVEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH IAEAQ++GG C F+DAEHALDP A +GV ENLL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 136 ALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSISR 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+ +E +G+Q
Sbjct: 196 SNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKERDEVVGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 254 RVKVVKNKLAPPFKQVEFDIMYGAGVSKVGELVDLGVKAGVVEKSGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E KQ+L +N V E+ LR+
Sbjct: 314 ENAKQYLKDNPEVAREIETTLRQN 337
>sp|C0RJG9|RECA_BRUMB Protein RecA OS=Brucella melitensis biotype 2 (strain ATCC 23457)
GN=recA PE=3 SV=1
Length = 361
Score = 385 bits (990), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/324 (58%), Positives = 244/324 (75%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI +FGKGSIM LG++ + VSTGS +LDIALG GGLPKGR+VEI
Sbjct: 16 KTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIVEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH IAEAQ++GG C F+DAEHALDP A +GV ENLL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 136 ALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSISR 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+ +E +G+Q
Sbjct: 196 SNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKERDEVVGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 254 RVKVVKNKLAPPFKQVEFDIMYGAGVSKVGELVDLGVKAGVVEKSGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E KQ+L +N V E+ LR+
Sbjct: 314 ENAKQYLKDNPEVAREIETTLRQN 337
>sp|A9M5L8|RECA_BRUC2 Protein RecA OS=Brucella canis (strain ATCC 23365 / NCTC 10854)
GN=recA PE=3 SV=1
Length = 361
Score = 385 bits (990), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/324 (58%), Positives = 244/324 (75%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI +FGKGSIM LG++ + VSTGS +LDIALG GGLPKGR+VEI
Sbjct: 16 KTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIVEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH IAEAQ++GG C F+DAEHALDP A +GV ENLL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 136 ALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSISR 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+ +E +G+Q
Sbjct: 196 SNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKERDEVVGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 254 RVKVVKNKLAPPFKQVEFDIMYGAGVSKVGELVDLGVKAGVVEKSGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E KQ+L +N V E+ LR+
Sbjct: 314 ENAKQYLKDNPEVAREIETTLRQN 337
>sp|Q04761|RECA_BRUAB Protein RecA OS=Brucella abortus biovar 1 (strain 9-941) GN=recA
PE=3 SV=2
Length = 361
Score = 385 bits (990), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/324 (58%), Positives = 244/324 (75%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI +FGKGSIM LG++ + VSTGS +LDIALG GGLPKGR+VEI
Sbjct: 16 KTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIVEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH IAEAQ++GG C F+DAEHALDP A +GV ENLL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 136 ALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSISR 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+ +E +G+Q
Sbjct: 196 SNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKERDEVVGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 254 RVKVVKNKLAPPFKQVEFDIMYGAGVSKVGELVDLGVKAGVVEKSGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E KQ+L +N V E+ LR+
Sbjct: 314 ENAKQYLKDNPEVAREIETTLRQN 337
>sp|Q2YRU7|RECA_BRUA2 Protein RecA OS=Brucella abortus (strain 2308) GN=recA PE=3 SV=1
Length = 361
Score = 385 bits (990), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/324 (58%), Positives = 244/324 (75%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI +FGKGSIM LG++ + VSTGS +LDIALG GGLPKGR+VEI
Sbjct: 16 KTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIVEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH IAEAQ++GG C F+DAEHALDP A +GV ENLL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 136 ALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSISR 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+ +E +G+Q
Sbjct: 196 SNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKERDEVVGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 254 RVKVVKNKLAPPFKQVEFDIMYGAGVSKVGELVDLGVKAGVVEKSGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E KQ+L +N V E+ LR+
Sbjct: 314 ENAKQYLKDNPEVAREIETTLRQN 337
>sp|B2S648|RECA_BRUA1 Protein RecA OS=Brucella abortus (strain S19) GN=recA PE=3 SV=1
Length = 361
Score = 385 bits (990), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/324 (58%), Positives = 244/324 (75%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI +FGKGSIM LG++ + VSTGS +LDIALG GGLPKGR+VEI
Sbjct: 16 KTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIVEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH IAEAQ++GG C F+DAEHALDP A +GV ENLL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 136 ALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSISR 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+ +E +G+Q
Sbjct: 196 SNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKERDEVVGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 254 RVKVVKNKLAPPFKQVEFDIMYGAGVSKVGELVDLGVKAGVVEKSGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E KQ+L +N V E+ LR+
Sbjct: 314 ENAKQYLKDNPEVAREIETTLRQN 337
>sp|B3PPU4|RECA_RHIE6 Protein RecA OS=Rhizobium etli (strain CIAT 652) GN=recA PE=3 SV=1
Length = 362
Score = 385 bits (990), Expect = e-106, Method: Compositional matrix adjust.
Identities = 190/331 (57%), Positives = 247/331 (74%), Gaps = 5/331 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI SFGKGSIM LG + + +STGS LDIALG GGLPKGR++EI
Sbjct: 16 KSKALEAALSQIERSFGKGSIMKLGSNENVIEIETISTGSLGLDIALGVGGLPKGRIIEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL IAE+Q++GG C F+DAEHALDP A +GV +NLL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALQTIAESQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 136 ALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+ EE IG+Q
Sbjct: 196 SNTMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSVKEREEVIGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 254 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK--LVVDH 331
E K FL +N + E+ + LR+ L+ D
Sbjct: 314 ENAKTFLRDNPDLAREIELALRQNAGLIADR 344
>sp|C3MD93|RECA_RHISN Protein RecA OS=Rhizobium sp. (strain NGR234) GN=recA PE=3 SV=1
Length = 361
Score = 385 bits (990), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/331 (58%), Positives = 247/331 (74%), Gaps = 5/331 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI SFGKGSIM LG + + VSTGS LDIALG GGLPKGR++EI
Sbjct: 16 KSKALEAALSQIERSFGKGSIMKLGSKDSVIEIETVSTGSLGLDIALGIGGLPKGRIIEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL IAEAQ++GG C F+DAEHALDP A +GV ENLL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALQTIAEAQKKGGICGFVDAEHALDPVYARKLGVDLENLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+VVDSVAALVP+ E++GEMGD+ MQARLMSQALRKL+ S+S
Sbjct: 136 ALEITDTLVRSGAIDVLVVDSVAALVPRAEIEGEMGDSLPGMQARLMSQALRKLTASISK 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+ EE +G+Q
Sbjct: 196 SNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSVKEREEVVGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E+IDL +K K+GA F+YN + +G+
Sbjct: 254 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELIDLGVKAGIVEKSGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK--LVVDH 331
E K FL +N + E+ + LR+ L+ D
Sbjct: 314 ENAKLFLRDNPDLLREIEMALRQNAGLIADK 344
>sp|Q5QUB8|RECA_IDILO Protein RecA OS=Idiomarina loihiensis (strain ATCC BAA-735 / DSM
15497 / L2-TR) GN=recA PE=3 SV=1
Length = 372
Score = 385 bits (990), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/348 (56%), Positives = 253/348 (72%), Gaps = 11/348 (3%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL AL QI FGKGSIM LG + T + VSTGS LDIALG GGLP GRVVEIYGP
Sbjct: 8 ALDAALGQIERQFGKGSIMRLGDNQT-LDIDSVSTGSLGLDIALGIGGLPFGRVVEIYGP 66
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTT+ L VIAEAQ+ G C F+DAEHALDP AE +GV ++LL++QPD GEQAL
Sbjct: 67 ESSGKTTMTLEVIAEAQKMGKTCAFVDAEHALDPIYAEALGVNVDDLLISQPDTGEQALE 126
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ D L+RSG+VD+V+VDSVAAL PK E++GEMGD+H+ +QARLMSQALRKL+ ++ S T
Sbjct: 127 ICDMLVRSGAVDIVIVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTSNIKKSNT 186
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
+ IFINQ+R K+ FG P E T GGNALKFY+SVRL+I+R G +K+G+E +G++ VK
Sbjct: 187 MCIFINQIRMKIGVM-FGNP-ETTTGGNALKFYSSVRLDIRRTGALKEGDEVVGNETRVK 244
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGKEAF 305
+VKNK+APPFK A F++ +GKGIS+E E+IDL +KHK KAGA ++YN D+ +GK
Sbjct: 245 VVKNKVAPPFKEAHFQILYGKGISKEGELIDLGVKHKMVDKAGAWYSYNGDKIGQGKANS 304
Query: 306 KQFLVENESVREELVIKLR-------EKLVVDHKEPQTAVTDEDSTEE 346
+FL +N + +EL ++R EK + +E + A ED+ E
Sbjct: 305 MKFLQDNPKIADELEGRIRELLLSKPEKRTKEIREAERAAAKEDAKSE 352
>sp|B0CH00|RECA_BRUSI Protein RecA OS=Brucella suis (strain ATCC 23445 / NCTC 10510)
GN=recA PE=3 SV=1
Length = 361
Score = 385 bits (990), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/324 (58%), Positives = 244/324 (75%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI +FGKGSIM LG++ + VSTGS +LDIALG GGLPKGR+VEI
Sbjct: 16 KTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIVEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH IAEAQ++GG C F+DAEHALDP A +GV ENLL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 136 ALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSISR 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +K+ +E +G+Q
Sbjct: 196 SNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSIKERDEVMGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 254 RVKVVKNKLAPPFKQVEFDIMYGAGVSKVGELVDLGVKAGVVEKSGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E KQ+L +N V E+ LR+
Sbjct: 314 ENAKQYLKDNPEVAREIETTLRQN 337
>sp|Q2W9P9|RECA_MAGSA Protein RecA OS=Magnetospirillum magneticum (strain AMB-1 / ATCC
700264) GN=recA PE=3 SV=1
Length = 359
Score = 385 bits (989), Expect = e-106, Method: Compositional matrix adjust.
Identities = 188/321 (58%), Positives = 243/321 (75%), Gaps = 3/321 (0%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL+ A+ QI +FGKGSIM LG VVSTGS LD+ALG GG+P+GR++E+YGP
Sbjct: 19 ALEAAVSQIERAFGKGSIMKLGGKDQVVETEVVSTGSLGLDVALGIGGVPRGRIIEVYGP 78
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTTLALH+IAEAQ++GG C F+DAEHALDPS A +GV + LL++QPD GEQAL
Sbjct: 79 ESSGKTTLALHIIAEAQKKGGTCAFVDAEHALDPSYARKLGVNLDELLISQPDAGEQALE 138
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ DTL+RSG+VDV+VVDSVAALVP+ EL+GEMGD HM + ARLMSQALRKL+ S+S S+T
Sbjct: 139 IADTLVRSGAVDVLVVDSVAALVPRAELEGEMGDNHMGLHARLMSQALRKLTGSVSKSKT 198
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
I+IFINQ+R K+ FG P E T GGNALKFYASVR+ I+R+G +K +E +G+Q VK
Sbjct: 199 IVIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRMEIRRVGAIKDRDEVVGNQTRVK 256
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYND-RNFRGKEAF 305
+VKNKLAPPFK F++ +G+GIS+ E+IDL +K K+GA F+YN R +G+E
Sbjct: 257 VVKNKLAPPFKVVDFDIMYGEGISKMGELIDLGVKANVVEKSGAWFSYNSTRIGQGRENA 316
Query: 306 KQFLVENESVREELVIKLREK 326
K FL EN ++ E+ +R+
Sbjct: 317 KTFLRENPAMAAEIEGAIRQN 337
>sp|P24543|RECA_RHIET Protein RecA OS=Rhizobium etli GN=recA PE=3 SV=2
Length = 361
Score = 385 bits (989), Expect = e-106, Method: Compositional matrix adjust.
Identities = 191/331 (57%), Positives = 246/331 (74%), Gaps = 5/331 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI SFGKGSIM LG + + +STGS LDIALG GGLPKGR++EI
Sbjct: 16 KSKALEAALSQIERSFGKGSIMKLGSNENVIEIETISTGSLGLDIALGVGGLPKGRIIEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL IAE+Q++GG C F+DAEHALDP A +GV +NLL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALQTIAESQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 136 ALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+ EE IG+Q
Sbjct: 196 SNTMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSVKEREEVIGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E++DL +K K+GA F+YN + +G
Sbjct: 254 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQGG 313
Query: 303 EAFKQFLVENESVREELVIKLREK--LVVDH 331
E K FL +N + E+ + LRE L+ D
Sbjct: 314 ENAKTFLRDNPDLAREIELALRENAGLIADR 344
>sp|P24074|RECA_RHILV Protein RecA OS=Rhizobium leguminosarum bv. viciae GN=recA PE=3
SV=1
Length = 351
Score = 385 bits (989), Expect = e-106, Method: Compositional matrix adjust.
Identities = 190/331 (57%), Positives = 245/331 (74%), Gaps = 5/331 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI SFGKGSIM LG + + +STGS LDIALG GGLP+GR++EI
Sbjct: 3 KSKALEAALSQIERSFGKGSIMKLGSNENVVEIETISTGSLGLDIALGVGGLPRGRIIEI 62
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL IAEAQ++GG C F+DAEHALDP A +GV +NLL++QPD GEQ
Sbjct: 63 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 122
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG VDV+VVDSVAAL P+ E++GEMGD +QARLMSQALRKL+ S+S
Sbjct: 123 ALEITDTLVRSGRVDVLVVDSVAALTPRAEIEGEMGDTVPGLQARLMSQALRKLTASISK 182
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+ EE IG+Q
Sbjct: 183 SNTMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAVKEREEVIGNQT 240
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 241 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQGR 300
Query: 303 EAFKQFLVENESVREELVIKLREK--LVVDH 331
E K FL +N + E+ + LR+ L+ D
Sbjct: 301 ENAKTFLRDNPDLAREIELSLRQNAGLIADR 331
>sp|Q2K7T3|RECA_RHIEC Protein RecA OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=recA
PE=3 SV=1
Length = 362
Score = 384 bits (987), Expect = e-106, Method: Compositional matrix adjust.
Identities = 190/331 (57%), Positives = 246/331 (74%), Gaps = 5/331 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI SFGKGSIM LG + + VSTGS LDIALG GGLPKGR++EI
Sbjct: 16 KSKALEAALSQIERSFGKGSIMKLGSNENVVEIETVSTGSLGLDIALGIGGLPKGRIIEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL IAE+Q++GG C F+DAEHALDP A +GV +NLL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALQTIAESQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+VVDSVAAL P+ E++GEMGD+ MQARLMSQALRKL+ S+S
Sbjct: 136 ALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGMQARLMSQALRKLTASISK 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+ EE +G+Q
Sbjct: 196 SNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSVKEREEVVGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 254 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK--LVVDH 331
E K FL +N + E+ + LR+ L+ D
Sbjct: 314 ENAKTFLRDNPDLAREIELALRQNAGLIADR 344
>sp|P27865|RECA_RHIME Protein RecA OS=Rhizobium meliloti (strain 1021) GN=recA PE=3 SV=1
Length = 348
Score = 384 bits (986), Expect = e-106, Method: Compositional matrix adjust.
Identities = 192/331 (58%), Positives = 246/331 (74%), Gaps = 5/331 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI SFGKGSIM LG + + VSTGS LDIALG GGLPKGR++EI
Sbjct: 3 KSKALEAALSQIERSFGKGSIMKLGAKDSVVEIETVSTGSLGLDIALGIGGLPKGRIIEI 62
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL IAEAQ++GG C F+DAEHALDP A +GV ENLL++QPD GEQ
Sbjct: 63 YGPESSGKTTLALQTIAEAQKKGGICGFVDAEHALDPVYARKLGVDLENLLISQPDTGEQ 122
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++D++V+DSVAALVP+ E++GEMGD+ MQARLMSQALRKL+ S+S
Sbjct: 123 ALEITDTLVRSGAIDILVIDSVAALVPRAEIEGEMGDSLPGMQARLMSQALRKLTASISK 182
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+ EE +G+Q
Sbjct: 183 SNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSVKEREEVVGNQT 240
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E+IDL +K K+GA F+YN + +G+
Sbjct: 241 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELIDLGVKAGIVEKSGAWFSYNSQRLGQGR 300
Query: 303 EAFKQFLVENESVREELVIKLREK--LVVDH 331
E K FL EN + E+ LR+ L+ D
Sbjct: 301 ENAKLFLRENPELLREIETALRQNAGLIADR 331
>sp|A6U9N5|RECA_SINMW Protein RecA OS=Sinorhizobium medicae (strain WSM419) GN=recA PE=3
SV=1
Length = 361
Score = 384 bits (985), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/331 (58%), Positives = 246/331 (74%), Gaps = 5/331 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI +FGKGSIM LG + + VSTGS LDIALG GGLPKGR+VEI
Sbjct: 16 KSKALEAALSQIERAFGKGSIMKLGAKDSVVEIETVSTGSLGLDIALGIGGLPKGRIVEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL IAEAQ++GG C F+DAEHALDP A +GV ENLL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALQTIAEAQKKGGICGFVDAEHALDPIYARKLGVDLENLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+VVDSVAALVP+ E++GEMGD+ MQARLMSQALRKL+ S+S
Sbjct: 136 ALEITDTLVRSGAIDVLVVDSVAALVPRAEIEGEMGDSLPGMQARLMSQALRKLTASISK 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+ EE +G+Q
Sbjct: 196 SNCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSVKEREEVVGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E+IDL +K K+GA F+YN + +G+
Sbjct: 254 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELIDLGVKAGIVEKSGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK--LVVDH 331
E K FL +N + E+ LR+ L+ D
Sbjct: 314 ENAKLFLRDNPELLREIETALRQNAGLIADR 344
>sp|C1D4J2|RECA_LARHH Protein RecA OS=Laribacter hongkongensis (strain HLHK9) GN=recA
PE=3 SV=1
Length = 354
Score = 384 bits (985), Expect = e-106, Method: Compositional matrix adjust.
Identities = 184/324 (56%), Positives = 249/324 (76%), Gaps = 3/324 (0%)
Query: 2 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVV 61
+ K AL AL QI FGKGSIM + + ++ V+STGS LD+ALG GGLP+GRVV
Sbjct: 4 TDKQKALSAALSQIEKQFGKGSIMRMNETQVNDNLQVISTGSLGLDMALGVGGLPRGRVV 63
Query: 62 EIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCG 121
EIYGPE+SGKTTL L V+AEAQ+ GG C +IDAE+ALDP A +GVK ++LL++QPD G
Sbjct: 64 EIYGPESSGKTTLCLQVVAEAQKLGGTCAYIDAENALDPVYAGKLGVKVDDLLVSQPDTG 123
Query: 122 EQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSL 181
EQAL + D L+RSG VDV+VVDSVAALVPK E++GEMGD+H+ +QARLMSQALRKL+ ++
Sbjct: 124 EQALEICDMLVRSGGVDVIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTGNI 183
Query: 182 SLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGS 241
+ T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG +KK +E IG+
Sbjct: 184 KRTNTLVIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAIKKTDEIIGN 241
Query: 242 QIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-R 300
+ VK+VKNK++PPFK A+F++ +G+GISRE EII++ + +KF K+GA + YN + +
Sbjct: 242 ETRVKVVKNKVSPPFKQAEFDILYGEGISREGEIIEMGVANKFVDKSGAWYAYNGQKIGQ 301
Query: 301 GKEAFKQFLVENESVREELVIKLR 324
GK+ +++L EN ++ +E+ K+R
Sbjct: 302 GKDNAREWLRENPAIAQEIEKKIR 325
>sp|Q3ST50|RECA_NITWN Protein RecA OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC
25391) GN=recA PE=3 SV=1
Length = 362
Score = 383 bits (984), Expect = e-105, Method: Compositional matrix adjust.
Identities = 189/349 (54%), Positives = 255/349 (73%), Gaps = 8/349 (2%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGS+M LG++ V V+S+GS LDIALG GGLPKGR+VE+
Sbjct: 16 KSKALSAALSQIERQFGKGSVMKLGKNDKSMDVEVISSGSLGLDIALGVGGLPKGRIVEV 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH +AEAQ++GG C FIDAEHALDP A +GV ++LL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALHAVAEAQKKGGICAFIDAEHALDPVYARKLGVNVDDLLISQPDHGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+++DSVAALVP+ EL+GEMGDA +QARLMSQALRKL+ S++
Sbjct: 136 ALEIADTLVRSGAVDVLIIDSVAALVPRAELEGEMGDALPGLQARLMSQALRKLTASINK 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ +G P E T GGNALKFYASVRL+I+RIG +K+ +E +G+Q
Sbjct: 196 SNTMVIFINQIRMKIGVM-YGSP-ETTTGGNALKFYASVRLDIRRIGAIKERDEVVGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G+GIS+ EI+DL +K K+GA F+Y+ + +G+
Sbjct: 254 RVKVVKNKLAPPFKQVEFDIMYGEGISKMGEILDLGVKAGIVEKSGAWFSYDSQRMGQGR 313
Query: 303 EAFKQFLVENESV--REELVIKLREKLVVDH---KEPQTAVTDEDSTEE 346
E K FL N + + E+ I+ L+ + P+ D+++ E+
Sbjct: 314 ENAKAFLRANPDITAKVEMAIRQNSGLIAEQILAGSPERETDDDETAED 362
>sp|P33156|RECA_AGRT5 Protein RecA OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970)
GN=recA PE=3 SV=1
Length = 363
Score = 382 bits (982), Expect = e-105, Method: Compositional matrix adjust.
Identities = 189/331 (57%), Positives = 247/331 (74%), Gaps = 5/331 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI SFGKGSIM LG + V VSTGS +LDIALG GGLPKGR++EI
Sbjct: 16 KSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGRIIEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLAL IAEAQ++GG C F+DAEHALDP A +GV ++LL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQSLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+V+DSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 136 ALEITDTLVRSGAVDVLVIDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S+ ++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+ EE +G+Q
Sbjct: 196 SKCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGAVKEREEVVGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK +F++ +G+G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 254 RVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK--LVVDH 331
E K FL +N E+ + LR+ L+ D
Sbjct: 314 ENAKTFLRDNPDTANEIELALRQNAGLIADR 344
>sp|A5EW90|RECA_DICNV Protein RecA OS=Dichelobacter nodosus (strain VCS1703A) GN=recA
PE=3 SV=1
Length = 350
Score = 382 bits (980), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/323 (56%), Positives = 241/323 (74%), Gaps = 3/323 (0%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 66
AL L Q+ FGKG++M LG V + +STGS LDIALG GGLPKGR+VEIYGP
Sbjct: 8 ALTAVLTQLDKQFGKGTVMRLGEQVAAHDIQAISTGSLTLDIALGIGGLPKGRIVEIYGP 67
Query: 67 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 126
E+SGKTT+ LHVIAEAQ+ GG FIDAEHALDP A +GV T++L + QPD GEQAL
Sbjct: 68 ESSGKTTMMLHVIAEAQKNGGTAAFIDAEHALDPIYARKLGVNTDDLYVTQPDTGEQALE 127
Query: 127 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 186
+ D L+RSG+ DV+VVDSVAAL PK E++GEMGD+H+ +QARLMSQALRKL+ ++ + T
Sbjct: 128 ICDALVRSGAFDVIVVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTGNIKRANT 187
Query: 187 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVK 246
+++FINQ+R K+ FG P E T GGNALKFYASVR++I+RIG +K+G+E +G++ VK
Sbjct: 188 LVVFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRMDIRRIGSIKEGDEVLGNETRVK 245
Query: 247 IVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGKEAF 305
+VKNK+APPFK A+F++ +G+G+SRE EII LA+ K+GA ++Y D +GKE
Sbjct: 246 VVKNKVAPPFKQAEFDILYGQGVSREGEIIQLAVNADIMQKSGAWYSYRDEKIGQGKEKV 305
Query: 306 KQFLVENESVREELVIKLREKLV 328
+ +L E+ V +E+ K+REK +
Sbjct: 306 RLYLKEHPDVAQEIETKIREKFI 328
>sp|Q7N7A6|RECA_PHOLL Protein RecA OS=Photorhabdus luminescens subsp. laumondii (strain
TT01) GN=recA PE=3 SV=1
Length = 355
Score = 381 bits (979), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/339 (57%), Positives = 246/339 (72%), Gaps = 4/339 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A+ +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV++VDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK GEE +GS+
Sbjct: 185 SSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGSVKNGEEVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+ E+IDL +KHK KAGA ++YN D+ +G
Sbjct: 243 TRVKVVKNKVAAPFKQAEFQIMYGEGINTYGELIDLGVKHKLVEKAGAWYSYNGDKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTD 340
K +L E+ V EL KLRE L+ + E +A +D
Sbjct: 303 KANATIYLKEHPEVATELDKKLREMLLHNAGEFNSAASD 341
>sp|Q60BS8|RECA_METCA Protein RecA OS=Methylococcus capsulatus (strain ATCC 33009 / NCIMB
11132 / Bath) GN=recA PE=3 SV=1
Length = 347
Score = 381 bits (978), Expect = e-105, Method: Compositional matrix adjust.
Identities = 190/336 (56%), Positives = 245/336 (72%), Gaps = 3/336 (0%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGS+M +G R + V+ TGS ALDIALG GGLP+GR+VE
Sbjct: 4 NKRKALGAALSQIEKQFGKGSVMRMGDVAAVRDIDVIPTGSLALDIALGCGGLPRGRIVE 63
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA+AQ+ GG F+DAEHALDP AE IGV ++LL++QPD GE
Sbjct: 64 IYGPESSGKTTLTLEVIAQAQKTGGVAAFVDAEHALDPVYAEKIGVNLDDLLVSQPDTGE 123
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L+RSG VDVVV+DSVAAL PK EL+GEMGD+HM +QARLMSQALRKL+ ++
Sbjct: 124 QALEIADVLVRSGGVDVVVIDSVAALTPKAELEGEMGDSHMGLQARLMSQALRKLTANIK 183
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+R G +K G+E IG++
Sbjct: 184 RSNTLVIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRSGAIKNGDEVIGNE 241
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTY-NDRNFRG 301
VK+VKNK+APPF+TA FE+ +G+GISRE E+IDL + H K+G+ ++Y DR +G
Sbjct: 242 TRVKVVKNKVAPPFRTADFEILYGEGISREGELIDLGVNHDIVQKSGSWYSYGGDRIGQG 301
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTA 337
K+ + +L E+ V + +REK + + +A
Sbjct: 302 KDNVRIYLKEHPEVAAAIEAAVREKALAGFQHAPSA 337
>sp|A7MJ38|RECA_CROS8 Protein RecA OS=Cronobacter sakazakii (strain ATCC BAA-894) GN=recA
PE=3 SV=1
Length = 354
Score = 381 bits (978), Expect = e-105, Method: Compositional matrix adjust.
Identities = 199/348 (57%), Positives = 247/348 (70%), Gaps = 6/348 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG T V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRT-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR G C FIDAEHALDP A +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQRAGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV+VVDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALARSGAVDVLVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+GEE +GS+
Sbjct: 185 NSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKEGEEVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +KHK KAGA ++YN +G
Sbjct: 243 TRVKVVKNKVAAPFKQAEFQILYGEGINFYGELVDLGVKHKLIEKAGAWYSYNGEKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKE-PQTAVTDED-STEET 347
K FL EN+ + +E+ KLR+ L+ + P V D D EET
Sbjct: 303 KANATNFLKENKPMADEIEKKLRDMLLNNQDSTPDFTVDDNDGGVEET 350
>sp|Q98NQ6|RECA_RHILO Protein RecA OS=Rhizobium loti (strain MAFF303099) GN=recA PE=3
SV=1
Length = 365
Score = 381 bits (978), Expect = e-105, Method: Compositional matrix adjust.
Identities = 186/324 (57%), Positives = 241/324 (74%), Gaps = 3/324 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI +FGKGSIM LG + + V TGS LDIALG GGLP+GR++EI
Sbjct: 16 KSKALDAALSQIERAFGKGSIMRLGANEQVVEIETVPTGSLGLDIALGVGGLPRGRIIEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH +AEAQ++GG C F+DAEHALDP A +GV ENLL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALHTVAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG++DV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL+ S+S
Sbjct: 136 ALEICDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISR 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK +E +G+Q
Sbjct: 196 SNTMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRIGSVKDRDEVVGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G+G+S+ E++DL +K K+GA F+YN + +G+
Sbjct: 254 RVKVVKNKLAPPFKVVEFDIMYGEGVSKTGELVDLGVKAGVVEKSGAWFSYNSQRLGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLREK 326
E K FL +N E+ + LR+
Sbjct: 314 ENAKLFLRDNPDTAREIELALRQN 337
>sp|Q1QMW2|RECA_NITHX Protein RecA OS=Nitrobacter hamburgensis (strain X14 / DSM 10229)
GN=recA PE=3 SV=1
Length = 362
Score = 381 bits (978), Expect = e-105, Method: Compositional matrix adjust.
Identities = 185/323 (57%), Positives = 246/323 (76%), Gaps = 3/323 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL AL QI FGKGS+M LG++ + V+S+GS LDIALG GGLPKGRVVEI
Sbjct: 16 KSKALSAALSQIERQFGKGSVMKLGKNDKSMDIEVISSGSLGLDIALGVGGLPKGRVVEI 75
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTLALH +AEAQ++GG C FIDAEHALDP A +GVK ++LL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPIYARKLGVKVDDLLISQPDHGEQ 135
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+++DSVAALVP+ EL+GEMGDA +QARLMSQALRKL+ S++
Sbjct: 136 ALEIADTLVRSGAVDVLIIDSVAALVPRAELEGEMGDALPGLQARLMSQALRKLTASINK 195
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T++IFINQ+R K+ +G P E T GGNALKFYASVRL+I+RIG +K+ +E +G+Q
Sbjct: 196 SNTMVIFINQIRMKIGVM-YGSP-ETTTGGNALKFYASVRLDIRRIGAIKERDEVVGNQT 253
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNKLAPPFK +F++ +G+GIS+ EI+DL +K K+GA F+++ + +G+
Sbjct: 254 RVKVVKNKLAPPFKQVEFDIMYGEGISKMGEILDLGVKAGIVEKSGAWFSHDSQRMGQGR 313
Query: 303 EAFKQFLVENESVREELVIKLRE 325
E K FL N + ++ + +R+
Sbjct: 314 ENAKAFLRANPDITAKIEVAIRQ 336
>sp|Q0AHX4|RECA_NITEC Protein RecA OS=Nitrosomonas eutropha (strain C91) GN=recA PE=3
SV=1
Length = 343
Score = 381 bits (978), Expect = e-105, Method: Compositional matrix adjust.
Identities = 185/322 (57%), Positives = 241/322 (74%), Gaps = 3/322 (0%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K+ AL AL QI +GKGSIM LG S + + VVSTGS +LDIALG GGLP+GR++EI
Sbjct: 5 KNKALTAALAQIEKQYGKGSIMRLGDSDVAKDIQVVSTGSLSLDIALGVGGLPRGRIIEI 64
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTTL L VIAE Q+ GG FIDAEHALDP A+ IGV + LL++QPD GEQ
Sbjct: 65 YGPESSGKTTLTLQVIAEMQKLGGTAAFIDAEHALDPQYAQKIGVNVQELLISQPDNGEQ 124
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + D L+RSGSVD+VV+DSVAAL P+ E++GEMG+ M +QARLMSQALRKL+ ++
Sbjct: 125 ALEITDMLVRSGSVDIVVIDSVAALTPRAEIEGEMGEPQMGLQARLMSQALRKLTANIKR 184
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
+ T +IFINQ+R K+ FG P E T GGNALKFYASVRL+I+R G +K+GEE +G++
Sbjct: 185 TNTTVIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRTGSIKRGEEIVGNET 242
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPFK A F + +G+GISRESEII+L + HK KAGA ++YN +G+
Sbjct: 243 RVKVVKNKVAPPFKQADFAILYGEGISRESEIIELGVLHKLIEKAGAWYSYNGEKIGQGR 302
Query: 303 EAFKQFLVENESVREELVIKLR 324
+ + +L E++ + E+ K+R
Sbjct: 303 DNVRDYLKEHKDLAHEIEQKIR 324
>sp|Q08327|RECA_ACEPO Protein RecA OS=Acetobacter polyoxogenes GN=recA PE=3 SV=1
Length = 348
Score = 380 bits (977), Expect = e-105, Method: Compositional matrix adjust.
Identities = 192/343 (55%), Positives = 253/343 (73%), Gaps = 5/343 (1%)
Query: 4 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 63
K AL+ AL QI +FGKGSIM +G T V V+STGS LDIALG GGLP+GR++EI
Sbjct: 9 KSKALEGALSQIERAFGKGSIMRMGERPT-EQVDVISTGSLGLDIALGIGGLPRGRIIEI 67
Query: 64 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 123
YGPE+SGKTT+ALH IAEAQR+GG C FIDAEHALDP A +GV +NLL++QPD GEQ
Sbjct: 68 YGPESSGKTTMALHAIAEAQRKGGTCAFIDAEHALDPGYARKLGVDVDNLLISQPDAGEQ 127
Query: 124 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 183
AL + DTL+RSG+VDV+VVDSVAALVP+ EL+G+MGD+H+ + ARLMSQALRKL+ S+S
Sbjct: 128 ALEIADTLVRSGAVDVLVVDSVAALVPRAELEGDMGDSHVGLHARLMSQALRKLTGSVSR 187
Query: 184 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 243
S T+LIF+NQ+R K+ FG P E T GGNALKFYASVR++I+RIG +K +E G+Q
Sbjct: 188 SNTMLIFLNQIRLKIGVM-FGSP-ESTTGGNALKFYASVRMDIRRIGSIKDKDEVTGNQT 245
Query: 244 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 302
VK+VKNK+APPF+ +F++ +G+GIS+ E+IDL +K K+GA F+ + + +G+
Sbjct: 246 RVKVVKNKMAPPFRQVEFDIMYGEGISKVGELIDLGVKAGIVEKSGAWFSCDSQRIGQGR 305
Query: 303 EAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTE 345
E KQFL ++ + ++ ++RE+ V E DED E
Sbjct: 306 ENAKQFLRDHPEMAADIERRVREQAGV-VAEAMLVGPDEDGAE 347
>sp|Q2SBR7|RECA_HAHCH Protein RecA OS=Hahella chejuensis (strain KCTC 2396) GN=recA PE=3
SV=1
Length = 345
Score = 380 bits (977), Expect = e-105, Method: Compositional matrix adjust.
Identities = 189/339 (55%), Positives = 250/339 (73%), Gaps = 11/339 (3%)
Query: 7 ALQQALDQITSSFGKGSIMWLGRSVTPRHV-PVVSTGSFALDIALGTGGLPKGRVVEIYG 65
AL AL QI FGKG++M +G PR + P VSTGS LDIALG GGLP GR+VEIYG
Sbjct: 8 ALTAALSQIERQFGKGAVMRMGEQ--PREIIPSVSTGSLGLDIALGIGGLPYGRIVEIYG 65
Query: 66 PEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQAL 125
PE+SGKTTL L VIAEAQRQG C F+DAEHALDP AE +GV + LL++QPD GEQAL
Sbjct: 66 PESSGKTTLTLQVIAEAQRQGKTCAFVDAEHALDPIYAEKLGVNIDQLLVSQPDTGEQAL 125
Query: 126 SLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQ 185
+ D L+RSG+VDV+++DSVAAL PK E++GEMGD+H+ +QARLMSQALRKL+ S+ +
Sbjct: 126 EIADMLVRSGAVDVIIIDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTGSVKQAN 185
Query: 186 TILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAV 245
++IFINQ+R K+ FG P E T GGNALKFYASVRL+I+R+G VK+GEE +G++ V
Sbjct: 186 CLMIFINQIRMKIGVM-FGSP-ETTTGGNALKFYASVRLDIRRVGSVKEGEEVVGNETRV 243
Query: 246 KIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGKEA 304
K+VKNK++PPFK A F++ +G+GI R EIIDL +K F K+GA ++Y D+ +GK
Sbjct: 244 KVVKNKVSPPFKQADFQIMYGRGIYRTGEIIDLGVKEGFVDKSGAWYSYKGDKIGQGKAN 303
Query: 305 FKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDS 343
++L E+ + E+ +REKL+ P+T V ++++
Sbjct: 304 SSRYLEEHPEIAVEIETAIREKLM-----PKTPVKEKEA 337
>sp|A5FXB8|RECA_ACICJ Protein RecA OS=Acidiphilium cryptum (strain JF-5) GN=recA PE=3
SV=1
Length = 343
Score = 380 bits (977), Expect = e-105, Method: Compositional matrix adjust.
Identities = 187/344 (54%), Positives = 253/344 (73%), Gaps = 6/344 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
+K+ AL AL QI +FGKGSIM +G + V+STGS LD+ALG GGLP+GRV+E
Sbjct: 2 EKNKALDAALAQIERAFGKGSIMRMGSRSESEAIDVISTGSLGLDLALGIGGLPRGRVIE 61
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTLALH +AEAQ++GG C F+DAEHALDP A +GV +NLL++QPD GE
Sbjct: 62 IYGPESSGKTTLALHAVAEAQKRGGTCAFVDAEHALDPIYARKLGVDVDNLLISQPDTGE 121
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + DTL+RSG++DV+VVDSVAALVP+ EL+GEMGD+H+ + ARLMSQALRKL+ S+S
Sbjct: 122 QALEIADTLVRSGAIDVLVVDSVAALVPRAELEGEMGDSHVGLHARLMSQALRKLTGSIS 181
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S+T++IF+NQ+R K+ FG P E T GGNALKFYAS+R++I+RIG +K EE G+Q
Sbjct: 182 RSKTLVIFLNQIRLKIGVM-FGNP-ETTTGGNALKFYASIRMDIRRIGSIKDREEVTGNQ 239
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK+VKNKLAPPF+ +F++ +G+GIS+ E++DL +K K+GA F+ + + +G
Sbjct: 240 TRVKVVKNKLAPPFRQVEFDIMYGEGISKVGELLDLGVKAGIVEKSGAWFSCDSQRIGQG 299
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTE 345
+E KQFL +N V + ++R + + +TDE TE
Sbjct: 300 RENAKQFLRDNPDVAASIEQRIRAQA---NLVEAAMITDETETE 340
>sp|A4TQ50|RECA_YERPP Protein RecA OS=Yersinia pestis (strain Pestoides F) GN=recA PE=3
SV=1
Length = 356
Score = 380 bits (976), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/350 (56%), Positives = 252/350 (72%), Gaps = 8/350 (2%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTLAL VIA AQR+G C FIDAEHALDP A+ +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLALQVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV++VDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK G+ +GS+
Sbjct: 185 NANTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKDGDVVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +KHK KAGA ++YN D+ +G
Sbjct: 243 TRVKVVKNKIAAPFKQAEFQILYGEGININGELVDLGVKHKLIEKAGAWYSYNGDKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVV--DHKEPQTAVTDE--DSTEET 347
K +L EN ++ EL KLRE L+ + ++P A T E D +ET
Sbjct: 303 KANASNYLKENPAIAAELDKKLREMLLNGGNGEQPVAAATAEFADGADET 352
>sp|C6DCR1|RECA_PECCP Protein RecA OS=Pectobacterium carotovorum subsp. carotovorum
(strain PC1) GN=recA PE=3 SV=1
Length = 357
Score = 379 bits (974), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/346 (57%), Positives = 249/346 (71%), Gaps = 8/346 (2%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A+ +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV++VDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+R G +K+GEE +GS+
Sbjct: 185 QANTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRTGAIKEGEEVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +KHK KAGA ++YN D+ +G
Sbjct: 243 TRVKVVKNKVAAPFKQAEFQILYGEGINIHGELVDLGVKHKLIEKAGAWYSYNGDKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKE--PQTAVT--DEDS 343
K FL EN +V EL KLRE L+ E P TA DED+
Sbjct: 303 KANACNFLKENPAVAAELDKKLREMLLHKGNELTPATAGNSHDEDA 348
>sp|P11406|RECA_PROMI Protein RecA OS=Proteus mirabilis GN=recA PE=3 SV=2
Length = 355
Score = 379 bits (973), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/339 (56%), Positives = 246/339 (72%), Gaps = 5/339 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + +V +STGS +LD+ALG GGLP+GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MNVETISTGSLSLDVALGAGGLPRGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A+ +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIASAQREGKICAFIDAEHALDPIYAQKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV+VVDSVAAL PK E++GE+GD+H+ + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALSRSGAVDVIVVDSVAALTPKAEIEGEIGDSHVGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK G+E IGS+
Sbjct: 185 NSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGSVKNGDEVIGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK+VKNK+A PFK A+F++ +G+GI+ E+IDL +KHK KAGA ++YN +G
Sbjct: 243 TRVKVVKNKVAAPFKQAEFQIMYGEGINTYGELIDLGVKHKLVEKAGAWYSYNGEKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTD 340
K +L E+ + EL KLRE ++++H T+ D
Sbjct: 303 KANATNYLKEHPEMYNELNTKLRE-MLLNHAGEFTSAAD 340
>sp|B4EUV6|RECA_PROMH Protein RecA OS=Proteus mirabilis (strain HI4320) GN=recA PE=3 SV=1
Length = 355
Score = 379 bits (973), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/339 (56%), Positives = 246/339 (72%), Gaps = 5/339 (1%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + +V +STGS +LD+ALG GGLP+GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MNVETISTGSLSLDVALGAGGLPRGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A+ +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIASAQREGKICAFIDAEHALDPIYAQKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV+VVDSVAAL PK E++GE+GD+H+ + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALSRSGAVDVIVVDSVAALTPKAEIEGEIGDSHVGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK G+E IGS+
Sbjct: 185 NSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGSVKNGDEVIGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RG 301
VK+VKNK+A PFK A+F++ +G+GI+ E+IDL +KHK KAGA ++YN +G
Sbjct: 243 TRVKVVKNKVAAPFKQAEFQIMYGEGINTYGELIDLGVKHKLVEKAGAWYSYNGEKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTD 340
K +L E+ + EL KLRE ++++H T+ D
Sbjct: 303 KANATNYLKEHPEMYNELNTKLRE-MLLNHAGEFTSAAD 340
>sp|B1JJA2|RECA_YERPY Protein RecA OS=Yersinia pseudotuberculosis serotype O:3 (strain
YPIII) GN=recA PE=3 SV=1
Length = 356
Score = 379 bits (972), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/350 (56%), Positives = 251/350 (71%), Gaps = 8/350 (2%)
Query: 3 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 62
K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP GR+VE
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPMGRIVE 64
Query: 63 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 122
IYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A+ +GV +NLL +QPD GE
Sbjct: 65 IYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGE 124
Query: 123 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 182
QAL + D L RSG+VDV++VDSVAAL PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 125 QALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184
Query: 183 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 242
+ T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK G+ +GS+
Sbjct: 185 NANTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKDGDVVVGSE 242
Query: 243 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 301
VK+VKNK+A PFK A+F++ +G+GI+ E++DL +KHK KAGA ++YN D+ +G
Sbjct: 243 TRVKVVKNKIAAPFKQAEFQILYGEGININGELVDLGVKHKLIEKAGAWYSYNGDKIGQG 302
Query: 302 KEAFKQFLVENESVREELVIKLREKLVV--DHKEPQTAVTDE--DSTEET 347
K +L EN ++ EL KLRE L+ + ++P A T E D +ET
Sbjct: 303 KANASNYLKENPAIAAELDKKLREMLLNGGNGEQPVAAATAEFADGADET 352
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.132 0.362
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 127,465,068
Number of Sequences: 539616
Number of extensions: 5256471
Number of successful extensions: 26240
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 705
Number of HSP's successfully gapped in prelim test: 244
Number of HSP's that attempted gapping in prelim test: 23874
Number of HSP's gapped (non-prelim): 980
length of query: 366
length of database: 191,569,459
effective HSP length: 119
effective length of query: 247
effective length of database: 127,355,155
effective search space: 31456723285
effective search space used: 31456723285
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)