BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017793
(366 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1E3J|A Chain A, Ketose Reductase (Sorbitol Dehydrogenase) From Silverleaf
Whitefly
Length = 352
Score = 308 bits (789), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 159/354 (44%), Positives = 232/354 (65%), Gaps = 9/354 (2%)
Query: 13 NQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFI 72
+ N++A L L+++ +P +V +++ +GICGSDVH+++ R A+FI
Sbjct: 3 SDNLSAVLYKQNDLRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYE-----HGRIADFI 57
Query: 73 VKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFG 132
VK PMVIGHE +G + +VG VK L+ GDRVA+EPG+ C C CK G YNLCP++ F
Sbjct: 58 VKDPMVIGHEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCA 117
Query: 133 SPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGS 192
+PP +G+LA VH A C+KLPDNVSLEEGA+ EPLSVGVHACRRA V T V+++G+
Sbjct: 118 TPPDDGNLARYYVHAADFCHKLPDNVSLEEGALLEPLSVGVHACRRAGVQLGTTVLVIGA 177
Query: 193 GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNA 252
GPIGLV++LAA+A+GA ++ T +RL +A+N GAD T V E+ + + +I++A
Sbjct: 178 GPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSA 236
Query: 253 MGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFR 312
+G +V+ DC G +K ++ +N TR GG + L+G+ +TV L A ARE+D+ +FR
Sbjct: 237 IGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQMVTVPLVNACAREIDIKSVFR 296
Query: 313 YRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEIS-AQGGNAIKVMFN 365
Y + +P+ +E + SG+ +VK L+TH F Q DAFE + + N IKVM +
Sbjct: 297 YCNDYPIALEMVASGRCNVKQLVTHSFKLEQ--TVDAFEAARKKADNTIKVMIS 348
>pdb|1PL7|A Chain A, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL7|B Chain B, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL7|C Chain C, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL7|D Chain D, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL8|A Chain A, Human SdhNAD+ COMPLEX
pdb|1PL8|B Chain B, Human SdhNAD+ COMPLEX
pdb|1PL8|C Chain C, Human SdhNAD+ COMPLEX
pdb|1PL8|D Chain D, Human SdhNAD+ COMPLEX
Length = 356
Score = 303 bits (776), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 158/353 (44%), Positives = 226/353 (64%), Gaps = 10/353 (2%)
Query: 12 KNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANF 71
K N++ + G L+++ Y +P GP +V +R+ ++GICGSDVH+++ R NF
Sbjct: 5 KPNNLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYG-----RIGNF 59
Query: 72 IVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF 131
IVKKPMV+GHE +G +E+VGS VK L+ GDRVA+EPG + CK G YNL P + F
Sbjct: 60 IVKKPMVLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFC 119
Query: 132 GSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMG 191
+PP +G+L H A CYKLPDNV+ EEGA+ EPLSVG+HACRR V V++ G
Sbjct: 120 ATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCG 179
Query: 192 SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN 251
+GPIG+VTLL A+A GA ++++TD+ RLS A+ +GAD ++S E K++
Sbjct: 180 AGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISK--ESPQEIARKVEG 237
Query: 252 AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIF 311
+G +V+ +C G + ++ + ATR GG + L+GL TV L AA REVD+ G+F
Sbjct: 238 QLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGVF 297
Query: 312 RYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF 364
RY +TWP+ I L S ++VKPL+THRF +K +E AFE + + G +K+M
Sbjct: 298 RYCNTWPVAISMLASKSVNVKPLVTHRFPL-EKALE-AFE-TFKKGLGLKIML 347
>pdb|3QE3|A Chain A, Sheep Liver Sorbitol Dehydrogenase
Length = 355
Score = 298 bits (763), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 154/351 (43%), Positives = 226/351 (64%), Gaps = 10/351 (2%)
Query: 14 QNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIV 73
+N++ + G L+++ Y +P GP +V +++ ++GICGSDVH+++ R +F+V
Sbjct: 6 ENLSLVVHGPGDLRLENYPIPEPGPNEVLLKMHSVGICGSDVHYWQ-----HGRIGDFVV 60
Query: 74 KKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGS 133
KKPMV+GHE +G + +VGS V+ L+ GDRVA++PG CK G YNL P + F +
Sbjct: 61 KKPMVLGHEASGTVVKVGSLVRHLQPGDRVAIQPGAPRQTDEFCKIGRYNLSPTIFFCAT 120
Query: 134 PPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSG 193
PP +G+L H A CYKLPDNV+ EEGA+ EPLSVG+HACRRA V V++ G+G
Sbjct: 121 PPDDGNLCRFYKHNANFCYKLPDNVTFEEGALIEPLSVGIHACRRAGVTLGNKVLVCGAG 180
Query: 194 PIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM 253
PIGLV LLAA+A GA ++++TD+ RLS A+ +GAD ++S E + K++ +
Sbjct: 181 PIGLVNLLAAKAMGAAQVVVTDLSASRLSKAKEVGADFILEISN--ESPEEIAKKVEGLL 238
Query: 254 GSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY 313
GS +V+ +C G + ++ + AT GG + L+GL +V L AA REVD+ G+FRY
Sbjct: 239 GSKPEVTIECTGVETSIQAGIYATHSGGTLVLVGLGSEMTSVPLVHAATREVDIKGVFRY 298
Query: 314 RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF 364
+TWP+ I L S ++VKPL+THRF +K +E AFE S + G +KVM
Sbjct: 299 CNTWPMAISMLASKSVNVKPLVTHRFPL-EKALE-AFETSKK-GLGLKVMI 346
>pdb|1PL6|A Chain A, Human SdhNADHINHIBITOR COMPLEX
pdb|1PL6|B Chain B, Human SdhNADHINHIBITOR COMPLEX
pdb|1PL6|C Chain C, Human SdhNADHINHIBITOR COMPLEX
pdb|1PL6|D Chain D, Human SdhNADHINHIBITOR COMPLEX
Length = 356
Score = 297 bits (761), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 155/345 (44%), Positives = 218/345 (63%), Gaps = 9/345 (2%)
Query: 12 KNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANF 71
K N++ + G L+++ Y +P GP +V +R ++GICGSDVH+++ R NF
Sbjct: 5 KPNNLSLVVHGPGDLRLENYPIPEPGPNEVLLRXHSVGICGSDVHYWEYG-----RIGNF 59
Query: 72 IVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF 131
IVKKP V+GHE +G +E+VGS VK L+ GDRVA+EPG + CK G YNL P + F
Sbjct: 60 IVKKPXVLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKXGRYNLSPSIFFC 119
Query: 132 GSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMG 191
+PP +G+L H A CYKLPDNV+ EEGA+ EPLSVG+HACRR V V++ G
Sbjct: 120 ATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCG 179
Query: 192 SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN 251
+GPIG VTLL A+A GA ++++TD+ RLS A+ +GAD ++S E K++
Sbjct: 180 AGPIGXVTLLVAKAXGAAQVVVTDLSATRLSKAKEIGADLVLQISK--ESPQEIARKVEG 237
Query: 252 AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIF 311
+G +V+ +C G + ++ + ATR GG + L+GL TV L AA REVD+ G+F
Sbjct: 238 QLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEXTTVPLLHAAIREVDIKGVF 297
Query: 312 RYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQG 356
RY +TWP+ I L S ++VKPL+THRF +K +E AFE +G
Sbjct: 298 RYCNTWPVAISXLASKSVNVKPLVTHRFPL-EKALE-AFETFKKG 340
>pdb|3M6I|A Chain A, L-Arabinitol 4-Dehydrogenase
pdb|3M6I|B Chain B, L-Arabinitol 4-Dehydrogenase
Length = 363
Score = 212 bits (539), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 129/329 (39%), Positives = 188/329 (57%), Gaps = 13/329 (3%)
Query: 40 DVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEV 99
+V V +++ GICGSDVH +K + M IV+ V+GHE AG + V VKS++V
Sbjct: 42 EVTVAVRSTGICGSDVHFWKHGCIGPM-----IVECDHVLGHESAGEVIAVHPSVKSIKV 96
Query: 100 GDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVS 159
GDRVA+EP + C C C G YN C + F +PP G L V HPA C+K+ N+S
Sbjct: 97 GDRVAIEPQVICNACEPCLTGRYNGCERVDFLSTPPVPGLLRRYVNHPAVWCHKI-GNMS 155
Query: 160 LEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQ 219
E GAM EPLSV + +RA V V+I G+GPIGL+T+L A+A GA ++ITD+D
Sbjct: 156 YENGAMLEPLSVALAGLQRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEG 215
Query: 220 RLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGID--VSFDCVGFDKTMSTALNAT 277
RL A+ + E + + KI + G GI+ V+ +C G + +++ A+ A
Sbjct: 216 RLKFAKEI-CPEVVTHKVERLSAEESAKKIVESFG-GIEPAVALECTGVESSIAAAIWAV 273
Query: 278 RPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITH 337
+ GGKV +IG+ K E+ + A+ REVD+ +RY +TWP I + +G +D+ L+TH
Sbjct: 274 KFGGKVFVIGVGKNEIQIPFMRASVREVDLQFQYRYCNTWPRAIRLVENGLVDLTRLVTH 333
Query: 338 RFGFTQKEIEDAFEISAQ-GGNAIKVMFN 365
RF ++ AFE ++ AIKV
Sbjct: 334 RFPL--EDALKAFETASDPKTGAIKVQIQ 360
>pdb|2DFV|A Chain A, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus
Horikoshii
pdb|2DFV|B Chain B, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus
Horikoshii
pdb|2DFV|C Chain C, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus
Horikoshii
Length = 347
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 112/340 (32%), Positives = 185/340 (54%), Gaps = 22/340 (6%)
Query: 33 LPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGS 92
+P GP +V +++ A ICG+D+H ++ + + R +K P + GHE AG + E+G
Sbjct: 23 VPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSR-----IKPPQIXGHEVAGEVVEIGP 77
Query: 93 EVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCY 152
V+ +EVGD V++E I CG C C+ G Y++C + FG T+G A V PA+ +
Sbjct: 78 GVEGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGV-DTDGVFAEYAVVPAQNIW 136
Query: 153 KLPDNVSLEEGAMCEPLSVGVHACRRANVGPET--NVMIMGSGPIGLVTLLAARAFGAPR 210
K P ++ E + EPL +A GP + +V+I G+GP+GL+ + A+A GA
Sbjct: 137 KNPKSIPPEYATLQEPLG---NAVDTVLAGPISGKSVLITGAGPLGLLGIAVAKASGAYP 193
Query: 211 IIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTM 270
+I+++ R +A+ +GAD ++ EDV +V I + G+G+DV + G K +
Sbjct: 194 VIVSEPSDFRRELAKKVGADYV--INPFEEDVVKEVXDITD--GNGVDVFLEFSGAPKAL 249
Query: 271 STALNATRPGGKVCLIGLAKTEMTVALTPAAA-REVDVIGIF--RYRSTWPLCIEFLRSG 327
L A P G+V L+GL ++T+ + + + GI TW L+SG
Sbjct: 250 EQGLQAVTPAGRVSLLGLYPGKVTIDFNNLIIFKALTIYGITGRHLWETWYTVSRLLQSG 309
Query: 328 KIDVKPLITHRF-GFTQKEIEDAFEISAQGGNAIKVMFNL 366
K+++ P+ITH++ GF + E+AFE+ + G KV+F L
Sbjct: 310 KLNLDPIITHKYKGFDK--YEEAFELX-RAGKTGKVVFXL 346
>pdb|2D8A|A Chain A, Crystal Structure Of Ph0655 From Pyrococcus Horikoshii Ot3
Length = 348
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 112/340 (32%), Positives = 185/340 (54%), Gaps = 22/340 (6%)
Query: 33 LPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGS 92
+P GP +V +++ A ICG+D+H ++ + + R +K P + GHE AG + E+G
Sbjct: 24 VPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSR-----IKPPQIXGHEVAGEVVEIGP 78
Query: 93 EVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCY 152
V+ +EVGD V++E I CG C C+ G Y++C + FG T+G A V PA+ +
Sbjct: 79 GVEGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGV-DTDGVFAEYAVVPAQNIW 137
Query: 153 KLPDNVSLEEGAMCEPLSVGVHACRRANVGPET--NVMIMGSGPIGLVTLLAARAFGAPR 210
K P ++ E + EPL +A GP + +V+I G+GP+GL+ + A+A GA
Sbjct: 138 KNPKSIPPEYATLQEPLG---NAVDTVLAGPISGKSVLITGAGPLGLLGIAVAKASGAYP 194
Query: 211 IIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTM 270
+I+++ R +A+ +GAD ++ EDV +V I + G+G+DV + G K +
Sbjct: 195 VIVSEPSDFRRELAKKVGADYV--INPFEEDVVKEVXDITD--GNGVDVFLEFSGAPKAL 250
Query: 271 STALNATRPGGKVCLIGLAKTEMTVALTPAAA-REVDVIGIF--RYRSTWPLCIEFLRSG 327
L A P G+V L+GL ++T+ + + + GI TW L+SG
Sbjct: 251 EQGLQAVTPAGRVSLLGLYPGKVTIDFNNLIIFKALTIYGITGRHLWETWYTVSRLLQSG 310
Query: 328 KIDVKPLITHRF-GFTQKEIEDAFEISAQGGNAIKVMFNL 366
K+++ P+ITH++ GF + E+AFE+ + G KV+F L
Sbjct: 311 KLNLDPIITHKYKGFDK--YEEAFELX-RAGKTGKVVFXL 347
>pdb|3GFB|A Chain A, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|B Chain B, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|C Chain C, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|D Chain D, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
Length = 350
Score = 171 bits (432), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 111/336 (33%), Positives = 177/336 (52%), Gaps = 17/336 (5%)
Query: 33 LPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGS 92
+P GP +V +++ A ICG+D+H ++ + + R +K P ++GHE AG + EVG
Sbjct: 24 VPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSR-----IKPPQIMGHEVAGEVVEVGP 78
Query: 93 EVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCY 152
V+ L+VGD +++E I CG C CK Y++C + FG +G AH + PAK +
Sbjct: 79 GVEDLQVGDYISVETHIVCGKCYACKHNRYHVCQNTKIFGV-DMDGVFAHYAIVPAKNAW 137
Query: 153 KLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRII 212
K P ++ E A+ EPL V + + +I G+GP+GL+ + A+A GA +I
Sbjct: 138 KNPKDMPPEYAALQEPLGNAVDTVLAGPIAGRST-LITGAGPLGLLGIAVAKASGAYPVI 196
Query: 213 ITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMST 272
+++ R +A+ +GAD V+ ED V I + G+G++V + G K +
Sbjct: 197 VSEPSEFRRKLAKKVGADYV--VNPFEEDPVKFVMDITD--GAGVEVFLEFSGAPKALEQ 252
Query: 273 ALNATRPGGKVCLIGLAKTEMTV---ALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKI 329
L A PGG+V L+GL E+T+ L A EV I TW ++SGK+
Sbjct: 253 GLKAVTPGGRVSLLGLFPREVTIDFNNLIIFKALEVHGITGRHLWETWYTVSSLIQSGKL 312
Query: 330 DVKPLITHRF-GFTQKEIEDAFEISAQGGNAIKVMF 364
++ P+ITH++ GF + E+AFE+ G V F
Sbjct: 313 NLDPIITHKYKGFDK--FEEAFELMRAGKTGKVVFF 346
>pdb|2DQ4|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase
pdb|2DQ4|B Chain B, Crystal Structure Of Threonine 3-Dehydrogenase
pdb|2EJV|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase Complexed
With Nad+
pdb|2EJV|B Chain B, Crystal Structure Of Threonine 3-Dehydrogenase Complexed
With Nad+
Length = 343
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 103/336 (30%), Positives = 171/336 (50%), Gaps = 18/336 (5%)
Query: 33 LPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGS 92
+P GP ++ VR++A ICG+D+H +K + R ++ P+V GHE +G++E VG
Sbjct: 20 VPEPGPGEILVRVEAASICGTDLHIWKWDAWARGR-----IRPPLVTGHEFSGVVEAVGP 74
Query: 93 EVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCY 152
V+ +VGD V+LE I C C C+ G+Y++C + G +G A VV PA+ +
Sbjct: 75 GVRRPQVGDHVSLESHIVCHACPACRTGNYHVCLNTQILGV-DRDGGFAEYVVVPAENAW 133
Query: 153 KLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRII 212
P ++ E A+ EP VH + +V+I G+GPIGL+ + RA GA I+
Sbjct: 134 VNPKDLPFEVAAILEPFGNAVHTVYAGSGVSGKSVLITGAGPIGLMAAMVVRASGAGPIL 193
Query: 213 ITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMST 272
++D + RL+ AR + D+ +V ++ GSG++V + G + +
Sbjct: 194 VSDPNPYRLAFARPYADRLVNPLEEDLLEV------VRRVTGSGVEVLLEFSGNEAAIHQ 247
Query: 273 ALNATRPGGKVCLIGLAKTEMTVALT-PAAAREVDVIGIF--RYRSTWPLCIEFLRSGKI 329
L A PGG+ ++G+ + L R + GI R TW + SG++
Sbjct: 248 GLMALIPGGEARILGIPSDPIRFDLAGELVMRGITAFGIAGRRLWQTWMQGTALVYSGRV 307
Query: 330 DVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 365
D+ PL+THR ++ +AF + A G A+KV+ +
Sbjct: 308 DLSPLLTHRLPLSR--YREAFGLLAS-GQAVKVILD 340
>pdb|4EJ6|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase
(Target Psi-012003) From Sinorhizobium Meliloti 1021
pdb|4EJM|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase
(Target Psi-012003) From Sinorhizobium Meliloti 1021
Bound To Nadp
Length = 370
Score = 147 bits (371), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 96/334 (28%), Positives = 158/334 (47%), Gaps = 14/334 (4%)
Query: 12 KNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANF 71
++ A L + + ++ +P GP D+ V+++A GICG+D H F
Sbjct: 21 QSXXKAVRLESVGNISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLH---------GEF 71
Query: 72 IVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF 131
P+ +GHE GI+ E GS V+ + G R+ +P ISCG C C+AG NLC +R
Sbjct: 72 PSTPPVTLGHEFCGIVVEAGSAVRDIAPGARITGDPNISCGRCPQCQAGRVNLCRNLRAI 131
Query: 132 GSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMG 191
G +G A V+ P K +++P + GA CEPL+ +H + + + V I+G
Sbjct: 132 GI-HRDGGFAEYVLVPRKQAFEIPLTLDPVHGAFCEPLACCLHGVDLSGIKAGSTVAILG 190
Query: 192 SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN 251
G IGL+T+ AR GA +I++ + +A +GA TA V DV +
Sbjct: 191 GGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGA--TATVDPSAGDVVEAIAGPVG 248
Query: 252 AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTP--AAAREVDVIG 309
+ G+DV +C G +T+ + + GG V ++G+ V + P RE+ V+G
Sbjct: 249 LVPGGVDVVIECAGVAETVKQSTRLAKAGGTVVILGVLPQGEKVEIEPFDILFRELRVLG 308
Query: 310 IFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQ 343
F + + +G I++ I+ R +
Sbjct: 309 SFINPFVHRRAADLVATGAIEIDRXISRRISLDE 342
>pdb|4ILK|A Chain A, Crystal Structure Of Short Chain Alcohol Dehydrogenase
(rspb) From E. Coli Cft073 (efi Target Efi-506413)
Complexed With Cofactor Nadh
pdb|4ILK|B Chain B, Crystal Structure Of Short Chain Alcohol Dehydrogenase
(rspb) From E. Coli Cft073 (efi Target Efi-506413)
Complexed With Cofactor Nadh
Length = 359
Score = 145 bits (366), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 152/328 (46%), Gaps = 18/328 (5%)
Query: 26 LKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAG 85
L I +PT +V+V++K GICGSD H + R N K P VIGHE G
Sbjct: 32 LSIIEREIPTPSAGEVRVKVKLAGICGSDSHIY--------RGHNPFAKYPRVIGHEFFG 83
Query: 86 IIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVV 145
+I+ VG V+S VG+RVA++P +SCGHC C G N+C + G +G + V
Sbjct: 84 VIDAVGEGVESARVGERVAVDPVVSCGHCYPCSIGKPNVCTTLAVLGV-HADGGFSEYAV 142
Query: 146 HPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARA 205
PAK +K+P+ V+ + M EP ++ + V++ G+GPIGL + +
Sbjct: 143 VPAKNAWKIPEAVADQYAVMIEPFTIAANVTGHGQPTENDTVLVYGAGPIGLTIVQVLKG 202
Query: 206 -FGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCV 264
+ +I+ D +RL A+ GAD I + T +G+ G + D
Sbjct: 203 VYNVKNVIVADRIDERLEKAKESGADWA------INNSQTPLGESFAEKGIKPTLIIDAA 256
Query: 265 GFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFL 324
+ A+ P ++ L+G + V +E+ + + +P+ I++L
Sbjct: 257 CHPSILKEAVTLASPAARIVLMGFSSEPSEVIQQGITGKELSIFSSRLNANKFPVVIDWL 316
Query: 325 RSGKIDVKPLITHRFGFTQKEIEDAFEI 352
G I + LITH F F + + DA +
Sbjct: 317 SKGLIKPEKLITHTFDF--QHVADAISL 342
>pdb|4A2C|A Chain A, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase
From Escherichia Coli
pdb|4A2C|B Chain B, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase
From Escherichia Coli
Length = 346
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/322 (30%), Positives = 157/322 (48%), Gaps = 30/322 (9%)
Query: 33 LPTLGPQD-VKVRIKALGICGSDVHH-FKVKKLSTMRCANFIVKKPMVIGHECAGIIEEV 90
+P + QD V+V+I + G+CGSD+ FK N P+ +GHE +G I+ V
Sbjct: 19 IPEIKHQDEVRVKIASSGLCGSDLPRIFK----------NGAHYYPITLGHEFSGYIDAV 68
Query: 91 GSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKL 150
GS V L GD VA P + C C C G Y+ C + F GS +G A +V K
Sbjct: 69 GSGVDDLHPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSR-RDGGFAEYIVVKRKN 127
Query: 151 CYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPR 210
+ LP ++ +E+GA EP++VG+HA A NV+I+G+G IGL+ + A A GA
Sbjct: 128 VFALPTDMPIEDGAFIEPITVGLHAFHLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKS 187
Query: 211 IIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGS--GIDVSFDCVGFDK 268
+ D+ ++L++A++ GA +T S + ++Q+ + + + G +
Sbjct: 188 VTAIDISSEKLALAKSFGAMQTFNSS------EMSAPQMQSVLRELRFNQLILETAGVPQ 241
Query: 269 TMSTALNATRPGGKVCLIGLAKTEM---TVALTPAAAREVDVIGIF-RYRSTWP-----L 319
T+ A+ P ++ L+G ++ + +E+ VIG + Y S WP
Sbjct: 242 TVELAVEIAGPHAQLALVGTLHQDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWET 301
Query: 320 CIEFLRSGKIDVKPLITHRFGF 341
L K+ ++PLI HR F
Sbjct: 302 ASRLLTERKLSLEPLIAHRGSF 323
>pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|B Chain B, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|C Chain C, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|D Chain D, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
Length = 339
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 99/322 (30%), Positives = 146/322 (45%), Gaps = 34/322 (10%)
Query: 26 LKIQPYHLPTLGPQDVKVRIKALGICGSDVH----HFKVKKLSTMRCANFIVKKPMVIGH 81
LKI+ PT+ +V VRIKA G+C +D+H + VK K P++ GH
Sbjct: 13 LKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKP-----------KLPLIPGH 61
Query: 82 ECAGIIEEVGSEVKSLEVGDRVALEPGI--SCGHCSLCKAGSYNLCPEMRFFGSPPTNGS 139
E GI+EEVG V L+VGDRV + P + +CGHC C +G LC + G +G
Sbjct: 62 EGVGIVEEVGPGVTHLKVGDRVGI-PWLYSACGHCDYCLSGQETLCEHQKNAGY-SVDGG 119
Query: 140 LAHKVVHPAKLCYKLPDNVSLEEGA--MCEPLSVGVHACRRANVGPETNVMIMGSGPIGL 197
A A K+PDN+S EE A C ++ A + P V I G G +G
Sbjct: 120 YAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTT-YKALKVTGAKPGEWVAIYGIGGLGH 178
Query: 198 VTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGI 257
V + A+A G ++ D+ ++L +A+ LGAD + + D K G+
Sbjct: 179 VAVQYAKAMGL-NVVAVDIGDEKLELAKELGADLV------VNPLKEDAAKFMKEKVGGV 231
Query: 258 DVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIG-IFRYRST 316
+ +A N+ R GG L+GL EM + + + +IG I R
Sbjct: 232 HAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKD 291
Query: 317 WPLCIEFLRSGK----IDVKPL 334
++F GK I+V+PL
Sbjct: 292 LQEALQFAAEGKVKTIIEVQPL 313
>pdb|3PII|A Chain A, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|C Chain C, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|B Chain B, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|D Chain D, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
Length = 339
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 99/322 (30%), Positives = 145/322 (45%), Gaps = 34/322 (10%)
Query: 26 LKIQPYHLPTLGPQDVKVRIKALGICGSDVH----HFKVKKLSTMRCANFIVKKPMVIGH 81
LKI+ PT+ +V VRIKA G+C +D+H + VK K P++ GH
Sbjct: 13 LKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKP-----------KLPLIPGH 61
Query: 82 ECAGIIEEVGSEVKSLEVGDRVALEPGI--SCGHCSLCKAGSYNLCPEMRFFGSPPTNGS 139
E GI+EEVG V L+VGDRV + P + +CGHC C +G LC + G +G
Sbjct: 62 EGVGIVEEVGPGVTHLKVGDRVGI-PWLYSACGHCDYCLSGQETLCEHQKNAGY-SVDGG 119
Query: 140 LAHKVVHPAKLCYKLPDNVSLEEGA--MCEPLSVGVHACRRANVGPETNVMIMGSGPIGL 197
A A K+PDN+S EE A C ++ A + P V I G G G
Sbjct: 120 YAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTT-YKALKVTGAKPGEWVAIYGIGGFGH 178
Query: 198 VTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGI 257
V + A+A G ++ D+ ++L +A+ LGAD + + D K G+
Sbjct: 179 VAVQYAKAMGL-NVVAVDIGDEKLELAKELGADLV------VNPLKEDAAKFMKEKVGGV 231
Query: 258 DVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIG-IFRYRST 316
+ +A N+ R GG L+GL EM + + + +IG I R
Sbjct: 232 HAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKD 291
Query: 317 WPLCIEFLRSGK----IDVKPL 334
++F GK I+V+PL
Sbjct: 292 LQEALQFAAEGKVKTIIEVQPL 313
>pdb|2EER|A Chain A, Structural Study Of Project Id St2577 From Sulfolobus
Tokodaii Strain7
pdb|2EER|B Chain B, Structural Study Of Project Id St2577 From Sulfolobus
Tokodaii Strain7
Length = 347
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 151/317 (47%), Gaps = 12/317 (3%)
Query: 24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFI-VKKPMVIGHE 82
K LK++ +P V ++I+A G+C SDVH + + +R + VK P+ +GHE
Sbjct: 11 KPLKLEDIPIPKPKGSQVLIKIEAAGVCHSDVH-MRQGRFGNLRIVEDLGVKLPVTLGHE 69
Query: 83 CAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAH 142
AG IEEVG EV GD VA+ P G+C C+ G +LC R+ G +G+ A
Sbjct: 70 IAGRIEEVGDEVVGYSKGDLVAVNPWEGEGNCYYCRIGEEHLCDSPRWLGI-NYDGAYAE 128
Query: 143 KVVHP-AKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGS-GPIGLVTL 200
V+ P K YKL ++E + A R+A++ P ++++G+ G +G + +
Sbjct: 129 YVLVPHYKYLYKLRRLSAVEAAPLTCSGVTTYRAVRKASLDPSKTLVVIGAGGGLGTMAI 188
Query: 201 LAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS 260
A+A II DV + L A+ GAD S+ +D +++ +I G G D
Sbjct: 189 QIAKAVSGATIIGVDVREEALEAAKRAGADYVINASS--QDPVSEIRRITQ--GKGADAV 244
Query: 261 FDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIG-IFRYRSTWPL 319
D +KT+S GK ++GL ++ EV IG + +S +
Sbjct: 245 IDLNNSEKTLSIYPYVLAKQGKYVMVGLFGADLKYHAPLITLNEVQFIGSLVGNQSDFLG 304
Query: 320 CIEFLRSGKIDVKPLIT 336
+ +GK VKP++T
Sbjct: 305 IMSLAEAGK--VKPMVT 319
>pdb|4EEZ|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase Variant Re1
pdb|4EEZ|B Chain B, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase Variant Re1
Length = 348
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 152/310 (49%), Gaps = 19/310 (6%)
Query: 32 HLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVG 91
L + P + + ++ G+C +D+H + +F K V+GHE GI++E+G
Sbjct: 20 ELRAIKPNEALLDMEYCGVCHTDLH---------VAAGDFGNKAGTVLGHEGIGIVKEIG 70
Query: 92 SEVKSLEVGDRVALEPGIS-CGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKL 150
++V SL+VGDRV++ CGHC C +G+ C E++ G +G +A + + A
Sbjct: 71 ADVSSLQVGDRVSVAWFFEGCGHCEYCVSGNETFCREVKNAGY-SVDGGMAEEAIVVADY 129
Query: 151 CYKLPDNVSLEEGAMCEPLSVGVH-ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAP 209
K+PD + E + V + A + + V P +I G+G +G + + A+
Sbjct: 130 AVKVPDGLDPIEASSITCAGVTTYKAIKVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGA 189
Query: 210 RIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKT 269
++I D++ +L++A+ +GAD T S D+ VD ++ KI G G+ + C
Sbjct: 190 KVIAVDINQDKLNLAKKIGADVTIN-SGDVNPVD-EIKKITG--GLGVQSAIVCAVARIA 245
Query: 270 MSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIG-IFRYRSTWPLCIEFLRSGK 328
A+ + +P GK+ + + TEMT+++ V+V G + R +F GK
Sbjct: 246 FEQAVASLKPMGKMVAVAVPNTEMTLSVPTVVFDGVEVAGSLVGTRLDLAEAFQFGAEGK 305
Query: 329 IDVKPLITHR 338
VKP++ R
Sbjct: 306 --VKPIVATR 313
>pdb|4EEX|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase
pdb|4EEX|B Chain B, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase
Length = 348
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 151/310 (48%), Gaps = 19/310 (6%)
Query: 32 HLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVG 91
L + P + + ++ G+C +D+H + ++ K V+GHE GI++E+G
Sbjct: 20 ELRAIKPNEALLDMEYCGVCHTDLH---------VAAGDYGNKAGTVLGHEGIGIVKEIG 70
Query: 92 SEVKSLEVGDRVALEPGIS-CGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKL 150
++V SL+VGDRV++ CGHC C +G+ C E++ G +G +A + + A
Sbjct: 71 ADVSSLQVGDRVSVAWFFEGCGHCEYCVSGNETFCREVKNAGY-SVDGGMAEEAIVVADY 129
Query: 151 CYKLPDNVSLEEGAMCEPLSVGVH-ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAP 209
K+PD + E + V + A + + V P +I G+G +G + + A+
Sbjct: 130 AVKVPDGLDPIEASSITCAGVTTYKAIKVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGA 189
Query: 210 RIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKT 269
++I D++ +L++A+ +GAD S D+ VD ++ KI G G+ + C
Sbjct: 190 KVIAVDINQDKLNLAKKIGADVIIN-SGDVNPVD-EIKKITG--GLGVQSAIVCAVARIA 245
Query: 270 MSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIG-IFRYRSTWPLCIEFLRSGK 328
A+ + +P GK+ + L TEMT+++ V+V G + R +F GK
Sbjct: 246 FEQAVASLKPMGKMVAVALPNTEMTLSVPTVVFDGVEVAGSLVGTRLDLAEAFQFGAEGK 305
Query: 329 IDVKPLITHR 338
VKP++ R
Sbjct: 306 --VKPIVATR 313
>pdb|2XAA|A Chain A, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|2XAA|B Chain B, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|2XAA|C Chain C, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|2XAA|D Chain D, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|3JV7|A Chain A, Structure Of Adh-A From Rhodococcus Ruber
pdb|3JV7|B Chain B, Structure Of Adh-A From Rhodococcus Ruber
pdb|3JV7|C Chain C, Structure Of Adh-A From Rhodococcus Ruber
pdb|3JV7|D Chain D, Structure Of Adh-A From Rhodococcus Ruber
Length = 345
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 143/328 (43%), Gaps = 28/328 (8%)
Query: 34 PTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE 93
PT GP ++ +++ A G+C SD+ + M A + P+ +GHE G + E+G
Sbjct: 21 PTPGPGEILLKVTAAGLCHSDIF------VMDMPAAQYAYGLPLTLGHEGVGTVAELGEG 74
Query: 94 VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFG-SPP---TNGSLA-HKVVHPA 148
V VGD VA+ CG C C G N C G +PP + GS+A + +V A
Sbjct: 75 VTGFGVGDAVAVYGPWGCGACHACARGRENYCTRAADLGITPPGLGSPGSMAEYMIVDSA 134
Query: 149 KLCYKLPDNVSLEEGAMCEPLSVGVHACRRA--NVGPETNVMIMGSGPIGLVTLLAARAF 206
+ + D + + + HA R +GP + +++G G +G V + RA
Sbjct: 135 RHLVPIGDLDPVAAAPLTDAGLTPYHAISRVLPLLGPGSTAVVIGVGGLGHVGIQILRAV 194
Query: 207 GAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGF 266
A R+I D+D RL++AR +GAD K D ++ G G FD VG
Sbjct: 195 SAARVIAVDLDDDRLALAREVGADAAVKSGAGAADAIREL-----TGGQGATAVFDFVGA 249
Query: 267 DKTMSTALNATRPGGKVCLIGL---AKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEF 323
T+ TA G + ++G+ A ++ + P A V + RS +
Sbjct: 250 QSTIDTAQQVVAVDGHISVVGIHAGAHAKVGFFMIPFGASVVTP--YWGTRSELMEVVAL 307
Query: 324 LRSGKIDVKPLITHRFGFTQKEIEDAFE 351
R+G++D+ H FT E A+
Sbjct: 308 ARAGRLDI-----HTETFTLDEGPAAYR 330
>pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
pdb|2EIH|B Chain B, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
Length = 343
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 152/319 (47%), Gaps = 21/319 (6%)
Query: 22 GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGH 81
G + L++ +P GP++V+VR+KA + DV V+K A+ + P V+G
Sbjct: 11 GPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVW---VRK----GVASPKLPLPHVLGA 63
Query: 82 ECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLA 141
+ +G+++ VG V+ GD V + PG+SCG C C AG NLCP + G +G+ A
Sbjct: 64 DGSGVVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGE-HRHGTYA 122
Query: 142 HKVVHPAKLCYKLPDNVSLEEGAMCEP--LSVGVHACRRANVGPETNVMIMGSGP-IGLV 198
VV P P N+S EE A L+ + V P +V++M +G + +
Sbjct: 123 EYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMAAGSGVSVA 182
Query: 199 TLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGID 258
+ A+ FGA R+I T +L A+ LGADET V+ D +V ++ G G D
Sbjct: 183 AIQIAKLFGA-RVIATAGSEDKLRRAKALGADET--VNYTHPDWPKEVRRLTG--GKGAD 237
Query: 259 VSFDCVGFDKTMSTALNATRPGGKVCLIGLAK-TEMTVALTPAAAREVDVIG-IFRYRST 316
D G + AT GG++ + G + E T+ R++ ++G +S
Sbjct: 238 KVVDHTG-ALYFEGVIKATANGGRIAIAGASSGYEGTLPFAHVFYRQLSILGSTMASKSR 296
Query: 317 WPLCIEFLRSGKIDVKPLI 335
+ F+ GK+ KP++
Sbjct: 297 LFPILRFVEEGKL--KPVV 313
>pdb|1E3L|A Chain A, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase
Complex With Nadh
pdb|1E3L|B Chain B, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase
Complex With Nadh
Length = 376
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 100/383 (26%), Positives = 166/383 (43%), Gaps = 61/383 (15%)
Query: 12 KNQNMAAWLLG----IKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMR 67
K + AW G I+ +++ P P+ +VRI+ + C V H + +
Sbjct: 8 KCKAAIAWKTGSPLCIEEIEVSP-------PKACEVRIQVIATC---VCHTDINATDPKK 57
Query: 68 CANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 127
A F P+V+GHECAGI+E VG V + + GD+V C C LC + NLC +
Sbjct: 58 KALF----PVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGK 113
Query: 128 MRFFGSPPTNGSL-------------------------AHKVVHPAKLCYKLPDNVSLEE 162
+R F P + L + VV A L ++ D +LE
Sbjct: 114 LRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANL-ARVDDEANLER 172
Query: 163 GAM--CEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQR 220
+ C S A A V P + + G G +GL ++ + GA RII D++ ++
Sbjct: 173 VCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEK 232
Query: 221 LSIARNLGADETA---KVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNAT 277
A+ LGA + ++ ++DV T++ G+D S DC G +T+ A++ T
Sbjct: 233 FPKAKALGATDCLNPRELDKPVQDVITEL------TAGGVDYSLDCAGTAQTLKAAVDCT 286
Query: 278 RPGGKVC-LIGLAKTEMTVALTPA-AAREVD--VIGIFRYRSTWPLCIEFLRSGKIDVKP 333
G C ++G EMT+ R ++ G ++ + P + ++ K D+
Sbjct: 287 VLGWGSCTVVGAKVDEMTIPTVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNKKFDLDL 346
Query: 334 LITHRFGFTQKEIEDAFEISAQG 356
L+TH F + I DA ++ +G
Sbjct: 347 LVTHALPF--ESINDAIDLMKEG 367
>pdb|3UKO|A Chain A, Crystal Structure Of S-Nitrosoglutathione Reductase From
Arabidopsis Thaliana, Complex With Nadh
pdb|3UKO|B Chain B, Crystal Structure Of S-Nitrosoglutathione Reductase From
Arabidopsis Thaliana, Complex With Nadh
pdb|4GL4|A Chain A, Crystal Structure Of Oxidized S-nitrosoglutathione
Reductase From Arabidopsis Thalina, Complex With Nadh
pdb|4GL4|B Chain B, Crystal Structure Of Oxidized S-nitrosoglutathione
Reductase From Arabidopsis Thalina, Complex With Nadh
Length = 378
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/354 (27%), Positives = 149/354 (42%), Gaps = 52/354 (14%)
Query: 38 PQDVKVRIKAL--GICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVK 95
PQ +VRIK L +C +D + + K + P ++GHE AGI+E VG V
Sbjct: 31 PQAGEVRIKILYTALCHTDAYTWSGKDPEGLF--------PCILGHEAAGIVESVGEGVT 82
Query: 96 SLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMR-----------------FFGSP---- 134
++ GD V C C CK+G NLC ++R G P
Sbjct: 83 EVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHF 142
Query: 135 -PTNGSLAHKVVHPAKLCYKLP----DNVSLEEGAMCEPLSVGVHACRRANVGPETNVMI 189
T+ + VVH + P D V L + P +G A V P +NV I
Sbjct: 143 MGTSTFSQYTVVHDVSVAKIDPTAPLDKVCLLGCGV--PTGLGA-VWNTAKVEPGSNVAI 199
Query: 190 MGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGK- 248
G G +GL A+ GA RII D+D ++ A+ G +E + +D D + +
Sbjct: 200 FGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEF----VNPKDHDKPIQEV 255
Query: 249 IQNAMGSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTVALTP-----AAA 302
I + G+D SF+C+G M AL G G ++G+A + ++ P
Sbjct: 256 IVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRV 315
Query: 303 REVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQG 356
+ G F+ R+ P +E + +I V ITH T EI AF++ +G
Sbjct: 316 WKGTAFGGFKSRTQVPWLVEKYMNKEIKVDEYITHN--LTLGEINKAFDLLHEG 367
>pdb|1E3E|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh
pdb|1E3E|B Chain B, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh
pdb|1E3I|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh And
Inhibitor
pdb|1E3I|B Chain B, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh And
Inhibitor
Length = 376
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 168/385 (43%), Gaps = 65/385 (16%)
Query: 12 KNQNMAAWLLG----IKTLKIQPYHLPTLGPQDVKVRIKALG--ICGSDVHHFKVKKLST 65
K + AW G I+ +++ P P+ +VRI+ + +C +D++ KK +
Sbjct: 8 KCKAAIAWKTGSPLCIEEIEVSP-------PKACEVRIQVIATCVCPTDINATDPKKKAL 60
Query: 66 MRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLC 125
P+V+GHECAGI+E VG V + + GD+V C C LC + NLC
Sbjct: 61 F---------PVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLC 111
Query: 126 PEMRFFGSPPTNGSL-------------------------AHKVVHPAKLCYKLPDNVSL 160
++R F P + L + VV A L ++ D +L
Sbjct: 112 GKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANL-ARVDDEANL 170
Query: 161 EEGAM--CEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV 218
E + C S A A V P + + G G +GL ++ + GA RII D++
Sbjct: 171 ERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDING 230
Query: 219 QRLSIARNLGADETA---KVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALN 275
++ A+ LGA + ++ ++DV T++ G+D S DC G +T+ A++
Sbjct: 231 EKFPKAKALGATDCLNPRELDKPVQDVITEL------TAGGVDYSLDCAGTAQTLKAAVD 284
Query: 276 ATRPGGKVC-LIGLAKTEMTVALTPA-AAREVD--VIGIFRYRSTWPLCIEFLRSGKIDV 331
T G C ++G EMT+ R ++ G ++ + P + ++ K D+
Sbjct: 285 CTVLGWGSCTVVGAKVDEMTIPTVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNKKFDL 344
Query: 332 KPLITHRFGFTQKEIEDAFEISAQG 356
L+TH F + I DA ++ +G
Sbjct: 345 DLLVTHALPF--ESINDAIDLMKEG 367
>pdb|3IP1|A Chain A, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
pdb|3IP1|B Chain B, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
pdb|3IP1|C Chain C, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
pdb|3IP1|D Chain D, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
Length = 404
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 105/208 (50%), Gaps = 17/208 (8%)
Query: 38 PQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEV--- 94
P ++ +++KA GICGSDVH + + + + P+ +GHE +G++ E G E
Sbjct: 55 PTEIIIKVKACGICGSDVHXAQTDEEGYILYPG-LTGFPVTLGHEFSGVVVEAGPEAINR 113
Query: 95 ---KSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLC 151
K E+G+ V E + CGHC C G N C + G +G+ A V AK
Sbjct: 114 RTNKRFEIGEPVCAEEXLWCGHCRPCAEGFPNHCENLNELGFN-VDGAFAEYVKVDAKYA 172
Query: 152 YKLPDNVSLEEG-------AMCEPLSVGVHAC--RRANVGPETNVMIMGSGPIGLVTLLA 202
+ L + + EG ++ EP SV +A R + P NV+I+G GPIGL +
Sbjct: 173 WSLRELEGVYEGDRLFLAGSLVEPTSVAYNAVIVRGGGIRPGDNVVILGGGPIGLAAVAI 232
Query: 203 ARAFGAPRIIITDVDVQRLSIARNLGAD 230
+ GA ++I+++ R ++A+ LGAD
Sbjct: 233 LKHAGASKVILSEPSEVRRNLAKELGAD 260
>pdb|1R37|A Chain A, Alcohol Dehydrogenase From Sulfolobus Solfataricus
Complexed With Nad(H) And 2-Ethoxyethanol
pdb|1R37|B Chain B, Alcohol Dehydrogenase From Sulfolobus Solfataricus
Complexed With Nad(H) And 2-Ethoxyethanol
Length = 347
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 93/318 (29%), Positives = 154/318 (48%), Gaps = 14/318 (4%)
Query: 24 KTLKIQPYHLPT-LGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFI-VKKPMVIGH 81
K L +Q +P GPQ V ++++A G+C SDVH + + +R + VK P+ +GH
Sbjct: 11 KPLSLQEIGVPKPKGPQ-VLIKVEAAGVCHSDVH-MRQGRFGNLRIVEDLGVKLPVTLGH 68
Query: 82 ECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLA 141
E AG IEEVG EV GD VA+ P G+C C+ G +LC R+ G +G+ A
Sbjct: 69 EIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGI-NFDGAYA 127
Query: 142 HKVVHP-AKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGP-ETNVMIMGSGPIGLVT 199
V+ P K YKL ++E + A R+A++ P +T +++ G +G +
Sbjct: 128 EYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMA 187
Query: 200 LLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDV 259
+ A+A II DV + + A+ GAD ++ ++D ++ +I + G+D
Sbjct: 188 VQIAKAVSGATIIGVDVREEAVEAAKRAGADYV--INASMQDPLAEIRRITES--KGVDA 243
Query: 260 SFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIG-IFRYRSTWP 318
D +KT+S A GK ++GL ++ E+ +G + +S +
Sbjct: 244 VIDLNNSEKTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFL 303
Query: 319 LCIEFLRSGKIDVKPLIT 336
+ +GK VKP+IT
Sbjct: 304 GIMRLAEAGK--VKPMIT 319
>pdb|1NTO|A Chain A, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|B Chain B, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|C Chain C, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|D Chain D, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|E Chain E, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|H Chain H, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NVG|A Chain A, N249y Mutant Of The Alcohol Dehydrogenase From The
Archaeon Sulfolobus Solfataricus-tetragonal Crystal Form
Length = 347
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/318 (29%), Positives = 154/318 (48%), Gaps = 14/318 (4%)
Query: 24 KTLKIQPYHLPT-LGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFI-VKKPMVIGH 81
K L +Q +P GPQ V ++++A G+C SDVH + + +R + VK P+ +GH
Sbjct: 11 KPLSLQEIGVPKPKGPQ-VLIKVEAAGVCHSDVH-MRQGRFGNLRIVEDLGVKLPVTLGH 68
Query: 82 ECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLA 141
E AG IEEVG EV GD VA+ P G+C C+ G +LC R+ G +G+ A
Sbjct: 69 EIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGI-NFDGAYA 127
Query: 142 HKVVHP-AKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGP-ETNVMIMGSGPIGLVT 199
V+ P K YKL ++E + A R+A++ P +T +++ G +G +
Sbjct: 128 EYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMA 187
Query: 200 LLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDV 259
+ A+A II DV + + A+ GAD ++ ++D ++ +I + G+D
Sbjct: 188 VQIAKAVSGATIIGVDVREEAVEAAKRAGADYV--INASMQDPLAEIRRITES--KGVDA 243
Query: 260 SFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIG-IFRYRSTWP 318
D +KT+S A GK ++GL ++ E+ +G + +S +
Sbjct: 244 VIDLNYSEKTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFL 303
Query: 319 LCIEFLRSGKIDVKPLIT 336
+ +GK VKP+IT
Sbjct: 304 GIMRLAEAGK--VKPMIT 319
>pdb|3I4C|A Chain A, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|B Chain B, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|C Chain C, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|D Chain D, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|E Chain E, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|H Chain H, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
Length = 347
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 93/318 (29%), Positives = 154/318 (48%), Gaps = 14/318 (4%)
Query: 24 KTLKIQPYHLPT-LGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFI-VKKPMVIGH 81
K L +Q +P GPQ V ++++A G+C SDVH + + +R + VK P+ +GH
Sbjct: 11 KPLSLQEIGVPKPKGPQ-VLIKVEAAGVCHSDVH-MRQGRFGNLRIVEDLGVKLPVTLGH 68
Query: 82 ECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLA 141
E AG IEEVG EV GD VA+ P G+C C+ G +LC R+ G +G+ A
Sbjct: 69 EIAGKIEEVGDEVVGYSKGDLVAVNPLQGEGNCYYCRIGEEHLCDSPRWLGI-NFDGAYA 127
Query: 142 HKVVHP-AKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGP-ETNVMIMGSGPIGLVT 199
V+ P K YKL ++E + A R+A++ P +T +++ G +G +
Sbjct: 128 EYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMA 187
Query: 200 LLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDV 259
+ A+A II DV + + A+ GAD ++ ++D ++ +I + G+D
Sbjct: 188 VQIAKAVSGATIIGVDVREEAVEAAKRAGADYV--INASMQDPLAEIRRITES--KGVDA 243
Query: 260 SFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIG-IFRYRSTWP 318
D +KT+S A GK ++GL ++ E+ +G + +S +
Sbjct: 244 VIDLNYSEKTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFL 303
Query: 319 LCIEFLRSGKIDVKPLIT 336
+ +GK VKP+IT
Sbjct: 304 GIMRLAEAGK--VKPMIT 319
>pdb|4DL9|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase From
Tomato (solanum Lycopersicum) In Complex With Nad+
pdb|4DL9|B Chain B, Crystal Structure Of S-nitrosoglutathione Reductase From
Tomato (solanum Lycopersicum) In Complex With Nad+
pdb|4DLA|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase
Apoenzyme From Tomato (solanum Lycopersicum)
pdb|4DLA|B Chain B, Crystal Structure Of S-nitrosoglutathione Reductase
Apoenzyme From Tomato (solanum Lycopersicum)
pdb|4DLB|A Chain A, Structure Of S-nitrosoglutathione Reductase From Tomato
(solanum Lycopersicum) Crystallized In Presence Of Nadh
And Glutathione
pdb|4DLB|B Chain B, Structure Of S-nitrosoglutathione Reductase From Tomato
(solanum Lycopersicum) Crystallized In Presence Of Nadh
And Glutathione
Length = 396
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 153/362 (42%), Gaps = 49/362 (13%)
Query: 38 PQDVKVRIKAL--GICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVK 95
PQ +VR+K L +C +D + + K + P V+GHE AGI+E VG V
Sbjct: 49 PQAGEVRVKVLYTALCHTDAYTWSGKDPEGLF--------PCVLGHEAAGIVESVGEGVT 100
Query: 96 SLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMR-----------------FFGSP---- 134
++ GD V C C CK+G NLC ++R G P
Sbjct: 101 EVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRAATGVGVMMNDRKSRFSINGKPIYHF 160
Query: 135 -PTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE---PLSVGVHACRRANVGPETNVMIM 190
T+ + VVH + K+ LE+ + P +G A V P + V +
Sbjct: 161 MGTSTFSQYTVVHDVSVA-KIDPVAPLEKVCLLGCGVPTGLGA-VWNTAKVEPGSIVAVF 218
Query: 191 GSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQ 250
G G +GL A+A GA RII D+D ++ A+N G E + + + +
Sbjct: 219 GLGTVGLAVAEGAKAAGASRIIGIDIDSKKFDRAKNFGVTEFINPKEHEQPIQQVIVDLT 278
Query: 251 NAMGSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTVALTP-----AAARE 304
+ G+D SF+C+G M +AL G G ++G+A + ++ P +
Sbjct: 279 DG---GVDYSFECIGNVSVMRSALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWK 335
Query: 305 VDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF 364
G F+ RS P ++ +I V ITH T +I AF++ G+ ++V+
Sbjct: 336 GTAFGGFKSRSQVPSLVDKYLKKEIKVDEYITHN--MTLADINKAFDL-MHDGDCLRVVL 392
Query: 365 NL 366
++
Sbjct: 393 DM 394
>pdb|3MEQ|A Chain A, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|B Chain B, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|C Chain C, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|D Chain D, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
Length = 365
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 93/313 (29%), Positives = 137/313 (43%), Gaps = 24/313 (7%)
Query: 24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKK--PMVIGH 81
K L I +P GP ++V I+A G+C +D+H + ++ VK P + GH
Sbjct: 36 KPLTIDEVPIPQPGPGQIQVAIQASGVCHTDLHAAE---------GDWPVKPNPPFIPGH 86
Query: 82 ECAGIIEEVGSEVKSLEVGDRVALEPGI--SCGHCSLCKAGSYNLCPEMRFFGSPPTNGS 139
E G + VGS VK ++ GDRV + P + +CGHC C G LC E G NG
Sbjct: 87 EGVGFVSAVGSGVKHVKEGDRVGI-PWLYTACGHCRHCLGGWETLCEEQLNTGY-SVNGG 144
Query: 140 LAHKVVHPAKLCYKLPDNVSLEEGA--MCEPLSVGVHACRRANVGPETNVMIMGSGPIGL 197
A VV LP N+ E A +C ++V + + P V+I G G +G
Sbjct: 145 FAEYVVADPNFVGHLPKNIDFNEIAPVLCAGVTV-YKGLKVTDTKPGDWVVISGIGGLGH 203
Query: 198 VTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGI 257
+ + ARA G + D+D ++L +AR LGA T T + D + K + G+
Sbjct: 204 MAVQYARAMGL-NVAAVDIDDRKLDLARRLGATVTVNAKT-VADPAAYIRKETDGGAQGV 261
Query: 258 DVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIG-IFRYRST 316
V+ K AL GG V L GL + +++ V V G I R
Sbjct: 262 LVTAVS---PKAFEQALGMVARGGTVSLNGLPPGDFPLSIFNMVLNGVTVRGSIVGTRLD 318
Query: 317 WPLCIEFLRSGKI 329
++F GK+
Sbjct: 319 LQESLDFAADGKV 331
>pdb|1HDZ|A Chain A, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|1HDZ|B Chain B, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
Length = 374
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 155/361 (42%), Gaps = 49/361 (13%)
Query: 38 PQDVKVRIK--ALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVK 95
P+ +VRIK A+GICG+D H + N + P+++GHE AGI+E VG V
Sbjct: 31 PKAYEVRIKMVAVGICGTDDH---------VVSGNLVTPLPVILGHEAAGIVESVGEGVT 81
Query: 96 SLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSP-----------PTNGSLAHKV 144
+++ GD+V CG C +CK N C + G+P G H
Sbjct: 82 TVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKND-LGNPRGTLQDGTRRFTCRGKPIHHF 140
Query: 145 VHPAKLC-YKLPDNVSLEEGAMCEPL----------SVGV-HACRRANVGPETNVMIMGS 192
+ + Y + D ++ + PL S G A A V P + + G
Sbjct: 141 LGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGL 200
Query: 193 GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNA 252
G +GL ++ +A GA RII D++ + + A+ LGA E + +D + ++
Sbjct: 201 GGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATE----CINPQDYKKPIQEVLKE 256
Query: 253 M-GSGIDVSFDCVG-FDKTMSTALNATRPGGKVCLIGLAKTEMTVALTP-----AAAREV 305
M G+D SF+ +G D M++ L G ++G+ +++ P +
Sbjct: 257 MTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQNLSINPMLLLTGRTWKG 316
Query: 306 DVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 365
V G F+ + P + + K + LITH F ++I + F++ G +I+ +
Sbjct: 317 AVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPF--EKINEGFDL-LHSGKSIRTVLT 373
Query: 366 L 366
Sbjct: 374 F 374
>pdb|3S1L|A Chain A, Crystal Structure Of Apo-Form Furx
pdb|3S1L|B Chain B, Crystal Structure Of Apo-Form Furx
pdb|3S1L|C Chain C, Crystal Structure Of Apo-Form Furx
pdb|3S1L|D Chain D, Crystal Structure Of Apo-Form Furx
pdb|3S2E|A Chain A, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|B Chain B, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|C Chain C, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|D Chain D, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|E Chain E, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|F Chain F, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|G Chain G, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|H Chain H, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2F|A Chain A, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|B Chain B, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|C Chain C, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|D Chain D, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|E Chain E, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|F Chain F, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|G Chain G, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|H Chain H, Crystal Structure Of Furx Nadh:furfural
pdb|3S2G|A Chain A, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|B Chain B, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|C Chain C, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|D Chain D, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|E Chain E, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|F Chain F, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|G Chain G, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|H Chain H, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2I|A Chain A, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|B Chain B, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|C Chain C, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|D Chain D, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|E Chain E, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|F Chain F, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|G Chain G, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|H Chain H, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
Length = 340
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 142/318 (44%), Gaps = 28/318 (8%)
Query: 26 LKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKK--PMVIGHEC 83
L I +P GP V+V+I+A G+C +D+H ++ VK P + GHE
Sbjct: 15 LTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAAD---------GDWPVKPTLPFIPGHEG 65
Query: 84 AGIIEEVGSEVKSLEVGDRVALEPGI--SCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLA 141
G + VGS V ++ GDRV + P + +CG+C C G LC + + G NG
Sbjct: 66 VGYVSAVGSGVSRVKEGDRVGV-PWLYSACGYCEHCLQGWETLCEKQQNTGY-SVNGGYG 123
Query: 142 HKVVHPAKLCYKLPDNVSLEEGA--MCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVT 199
VV LPD V E A +C ++V + + P V+I G G +G V
Sbjct: 124 EYVVADPNYVGLLPDKVGFVEIAPILCAGVTV-YKGLKVTDTRPGQWVVISGIGGLGHVA 182
Query: 200 LLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDV 259
+ ARA G R+ D+D +L++AR LGA+ V+ + D D +Q +G V
Sbjct: 183 VQYARAMGL-RVAAVDIDDAKLNLARRLGAE----VAVNARDTDP-AAWLQKEIGGAHGV 236
Query: 260 SFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIG-IFRYRSTWP 318
V K S A+ R GG + L GL + + + + + G I RS
Sbjct: 237 LVTAVS-PKAFSQAIGMVRRGGTIALNGLPPGDFGTPIFDVVLKGITIRGSIVGTRSDLQ 295
Query: 319 LCIEFLRSGKIDVKPLIT 336
++F G DVK ++
Sbjct: 296 ESLDFAAHG--DVKATVS 311
>pdb|1VJ0|A Chain A, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
pdb|1VJ0|B Chain B, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
pdb|1VJ0|C Chain C, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
pdb|1VJ0|D Chain D, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
Length = 380
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 152/350 (43%), Gaps = 44/350 (12%)
Query: 41 VKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSL--- 97
+ V I + G+CGSDVH F R + V P+++GHE AG + EV E + L
Sbjct: 45 ILVEILSAGVCGSDVHMF--------RGEDPRVPLPIILGHEGAGRVVEVNGEKRDLNGE 96
Query: 98 --EVGDRVALEPGISCGHCSLCKAGSY-NLCPEMRFFG-------SPPTNGSLA-HKVVH 146
+ GD + GI+CG C CK LCP + +G P G + H V+
Sbjct: 97 LLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLD 156
Query: 147 PAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPET----NVMIMGSGPIGLVTLLA 202
P K+ + L+ AM + G A + PE+ V+I G+GP+GL ++
Sbjct: 157 PETDVLKVSEKDDLDVLAMA--MCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVI 214
Query: 203 ARAFGAPRIIITDVDVQRLSIARNLGADETA-KVSTDIEDVDTDVGKIQNAMGSGIDVSF 261
AR+ GA +I+ RL +A +GAD T + T +E+ + I + G G D
Sbjct: 215 ARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRETSVEERRKAIMDITH--GRGADFIL 272
Query: 262 DCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTW-PLC 320
+ G + + R GG + G+A + V P E V+ ++ W
Sbjct: 273 EATGDSRALLEGSELLRRGGFYSVAGVAVPQDPV---PFKVYEWLVLKNATFKGIWVSDT 329
Query: 321 IEFLRSGKID------VKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF 364
F+++ I + LITHR KE A E+ + A+KV+
Sbjct: 330 SHFVKTVSITSRNYQLLSKLITHRLPL--KEANKALEL-MESREALKVIL 376
>pdb|1LLU|A Chain A, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|B Chain B, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|C Chain C, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|D Chain D, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|E Chain E, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|F Chain F, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|G Chain G, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|H Chain H, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
Length = 342
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 124/271 (45%), Gaps = 29/271 (10%)
Query: 26 LKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPM--VIGHEC 83
L+I+ +P GP V V+I+A G+C +D+H + ++ VK P+ + GHE
Sbjct: 19 LRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAE---------GDWPVKPPLPFIPGHEG 69
Query: 84 AGIIEEVGSEVKSLEVGDRVALEPGI--SCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLA 141
G + VGS V ++ GDRV + P + +CG C C G LC + G NG A
Sbjct: 70 VGYVAAVGSGVTRVKEGDRVGI-PWLYTACGCCEHCLTGWETLCESQQNTGY-SVNGGYA 127
Query: 142 HKVVHPAKLCYKLPDNVSLEEGA--MCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVT 199
V+ LP NV E A +C ++V ++ N P V I G G +G V
Sbjct: 128 EYVLADPNYVGILPKNVEFAEIAPILCAGVTV-YKGLKQTNARPGQWVAISGIGGLGHVA 186
Query: 200 LLAARAFGAPRIIITDVDVQRLSIARNLGADET--AKVSTDIEDVDTDVGKIQNAMGSGI 257
+ ARA G + D+D +L +AR LGA T A+ +E + D+G + + +
Sbjct: 187 VQYARAMGL-HVAAIDIDDAKLELARKLGASLTVNARQEDPVEAIQRDIGGAHGVLVTAV 245
Query: 258 DVSFDCVGFDKTMSTALNATRPGGKVCLIGL 288
+ A+ R GG + L+GL
Sbjct: 246 S--------NSAFGQAIGMARRGGTIALVGL 268
>pdb|1H2B|A Chain A, Crystal Structure Of The Alcohol Dehydrogenase From The
Hyperthermophilic Archaeon Aeropyrum Pernix At 1.65a
Resolution
pdb|1H2B|B Chain B, Crystal Structure Of The Alcohol Dehydrogenase From The
Hyperthermophilic Archaeon Aeropyrum Pernix At 1.65a
Resolution
Length = 359
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 122/272 (44%), Gaps = 20/272 (7%)
Query: 24 KTLKIQPYHLPTL-GPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHE 82
K L+I+ P L G DV VRI G+C +D+H + M K P +GHE
Sbjct: 26 KPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLH-----LVQGMWHELLQPKLPYTLGHE 80
Query: 83 CAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAH 142
G IEEV V+ LE GD V L P ++ G C C+AG C + F G +G A
Sbjct: 81 NVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGL-NIDGGFAE 139
Query: 143 KVVHPAKLCYKLPDNVSLEEGAMCEPLS-VGVHACRRA-----NVGPETNVMIMGSGPIG 196
+ + KLP ++S E+ PL+ G+ A R + P V I+G G +G
Sbjct: 140 FMRTSHRSVIKLPKDISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLG 199
Query: 197 LVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTD-IEDVDTDVGKIQNAMGS 255
+ + + +I DV ++L +A LGAD D ++ V ++ G
Sbjct: 200 HIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDARRDPVKQV------MELTRGR 253
Query: 256 GIDVSFDCVGFDKTMSTALNATRPGGKVCLIG 287
G++V+ D VG T+ G++ ++G
Sbjct: 254 GVNVAMDFVGSQATVDYTPYLLGRMGRLIIVG 285
>pdb|1JVB|A Chain A, Alcohol Dehydrogenase From The Archaeon Sulfolobus
Solfataricus
Length = 347
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 149/317 (47%), Gaps = 12/317 (3%)
Query: 24 KTLKIQPYHLPT-LGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHE 82
K L +Q +P GPQ V ++++A G+C SDVH + + + + VK P+ +GHE
Sbjct: 11 KPLSLQEIGVPKPKGPQ-VLIKVEAAGVCHSDVHXRQGRFGNLRIVEDLGVKLPVTLGHE 69
Query: 83 CAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAH 142
AG IEEVG EV GD VA+ P G+C C+ G +LC R+ G +G+ A
Sbjct: 70 IAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGI-NFDGAYAE 128
Query: 143 KVVHP-AKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGP-ETNVMIMGSGPIGLVTL 200
V+ P K YKL ++E + A R+A++ P +T +++ G +G +
Sbjct: 129 YVIVPHYKYXYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTXAV 188
Query: 201 LAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS 260
A+A II DV + + A+ GAD ++ ++D ++ +I + G+D
Sbjct: 189 QIAKAVSGATIIGVDVREEAVEAAKRAGADYV--INASMQDPLAEIRRITES--KGVDAV 244
Query: 261 FDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLC 320
D +KT+S A GK +GL ++ E+ +G + L
Sbjct: 245 IDLNNSEKTLSVYPKALAKQGKYVXVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFLG 304
Query: 321 IEFL-RSGKIDVKPLIT 336
I L +GK VKP IT
Sbjct: 305 IXRLAEAGK--VKPXIT 319
>pdb|1HT0|A Chain A, Human Gamma-2 Alcohol Dehydrogense
pdb|1HT0|B Chain B, Human Gamma-2 Alcohol Dehydrogense
pdb|1U3W|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Gamma-2-
Gamma-2 Isoform Complexed With N-1-Methylheptylformamide
Determined To 1.45 Angstrom Resolution
pdb|1U3W|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Gamma-2-
Gamma-2 Isoform Complexed With N-1-Methylheptylformamide
Determined To 1.45 Angstrom Resolution
Length = 374
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 90/378 (23%), Positives = 162/378 (42%), Gaps = 48/378 (12%)
Query: 19 WLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMV 78
W L K I+ + +V++++ A GIC SD H + N + P++
Sbjct: 15 WELK-KPFSIEEVEVAPPKAHEVRIKMVAAGICRSDEH---------VVSGNLVTPLPVI 64
Query: 79 IGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSP---- 134
+GHE AGI+E VG V +++ GD+V CG C +CK N C + G+P
Sbjct: 65 LGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRICKNPESNYCLKND-LGNPRGTL 123
Query: 135 -------PTNGSLAHKVVHPAKLC-YKLPDNVSLEEGAMCEPL----------SVGV-HA 175
+G H V + Y + D ++ + PL S G A
Sbjct: 124 QDGTRRFTCSGKPIHHFVGVSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSA 183
Query: 176 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKV 235
+ A V P + + G G +GL ++ +A GA RII D++ + + A+ LGA E
Sbjct: 184 VKVAKVTPGSTCAVFGLGGVGLSVVMGCKAAGAARIIAVDINKDKFAKAKELGATE---- 239
Query: 236 STDIEDVDTDVGKIQNAM-GSGIDVSFDCVG-FDKTMSTALNATRPGGKVCLIGLAKTEM 293
+ +D + ++ M G+D SF+ +G D M++ L G ++G+
Sbjct: 240 CINPQDYKKPIQEVLKEMTDGGVDFSFEVIGQLDTMMASLLCCHEACGTSVIVGVPPDSQ 299
Query: 294 TVALTP-----AAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIED 348
+++ P + + G F+ + + P + + K + LIT+ F ++I +
Sbjct: 300 NLSINPMLLLTGRTWKGAIFGGFKSKESVPKLVADFMAKKFSLDALITNVLPF--EKINE 357
Query: 349 AFEISAQGGNAIKVMFNL 366
F++ + G +I+ +
Sbjct: 358 GFDL-LRSGKSIRTVLTF 374
>pdb|1EE2|B Chain B, The Structure Of Steroid-Active Alcohol Dehydrogenase At
1.54 A Resolution
Length = 373
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 88/373 (23%), Positives = 160/373 (42%), Gaps = 48/373 (12%)
Query: 24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHEC 83
K I+ + +V++++ A GIC SD H + + P++ GHE
Sbjct: 19 KPFSIEEVEVAPPKAHEVRIKMVAAGICRSDDH---------VVSGTLVAPLPVIAGHEA 69
Query: 84 AGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSP--------- 134
AGI+E +G V ++ GD+V CG CS+CK NLC ++ P
Sbjct: 70 AGIVESIGEGVTTVRPGDKVIPLFIPQCGKCSVCKHPEGNLC--LKNLSMPRGTMQDGTS 127
Query: 135 --PTNGSLAHKVVHPAKLC-YKLPDNVSLEEGAMCEPL----------SVGV-HACRRAN 180
G H + + Y + D +S+ + PL S G A + A
Sbjct: 128 RFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLVGCGFSTGYGSAVKVAK 187
Query: 181 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIE 240
V + + G G +GL ++ +A GA RII D++ + + A+ +GA E + +
Sbjct: 188 VTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATEC----VNPQ 243
Query: 241 DVDTDVGKIQNAMGS-GIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTVALT 298
D + ++ M + G+D SF+ +G TM AL+ + G ++G+ +++
Sbjct: 244 DYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVAALSCCQEAYGVSVIVGVPPDSQNLSMN 303
Query: 299 P-----AAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEIS 353
P + + G F+ + + P + + K + PLITH F ++I + F++
Sbjct: 304 PMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGFDL- 360
Query: 354 AQGGNAIKVMFNL 366
+ G +I+ +
Sbjct: 361 LRSGKSIRTILTF 373
>pdb|1EE2|A Chain A, The Structure Of Steroid-Active Alcohol Dehydrogenase At
1.54 A Resolution
Length = 373
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 88/373 (23%), Positives = 160/373 (42%), Gaps = 48/373 (12%)
Query: 24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHEC 83
K I+ + +V++++ A GIC SD H + + P++ GHE
Sbjct: 19 KPFSIEEVEVAPPKAHEVRIKMVAAGICRSDDH---------VVSGTLVAPLPVIAGHEA 69
Query: 84 AGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSP--------- 134
AGI+E +G V ++ GD+V CG CS+CK NLC ++ P
Sbjct: 70 AGIVESIGEGVTTVRPGDKVIPLFIPQCGKCSVCKHPEGNLC--LKNLSMPRGTMQDGTS 127
Query: 135 --PTNGSLAHKVVHPAKLC-YKLPDNVSLEEGAMCEPL----------SVGV-HACRRAN 180
G H + + Y + D +S+ + PL S G A + A
Sbjct: 128 RFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLVGCGFSTGYGSAVKVAK 187
Query: 181 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIE 240
V + + G G +GL ++ +A GA RII D++ + + A+ +GA E + +
Sbjct: 188 VTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATEC----VNPQ 243
Query: 241 DVDTDVGKIQNAMGS-GIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTVALT 298
D + ++ M + G+D SF+ +G TM AL+ + G ++G+ +++
Sbjct: 244 DYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVAALSCCQEAYGVSVIVGVPPDSQNLSMN 303
Query: 299 P-----AAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEIS 353
P + + G F+ + + P + + K + PLITH F ++I + F++
Sbjct: 304 PMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGFDL- 360
Query: 354 AQGGNAIKVMFNL 366
+ G +I+ +
Sbjct: 361 LRSGKSIRTILTF 373
>pdb|1HDY|A Chain A, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|1HDY|B Chain B, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
Length = 374
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 154/361 (42%), Gaps = 49/361 (13%)
Query: 38 PQDVKVRIK--ALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVK 95
P+ +VRIK A+GIC +D H + N + P+++GHE AGI+E VG V
Sbjct: 31 PKAYEVRIKMVAVGICHTDDH---------VVSGNLVTPLPVILGHEAAGIVESVGEGVT 81
Query: 96 SLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSP-----------PTNGSLAHKV 144
+++ GD+V CG C +CK N C + G+P G H
Sbjct: 82 TVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKND-LGNPRGTLQDGTRRFTCRGKPIHHF 140
Query: 145 VHPAKLC-YKLPDNVSLEEGAMCEPL----------SVGV-HACRRANVGPETNVMIMGS 192
+ + Y + D ++ + PL S G A A V P + + G
Sbjct: 141 LGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGL 200
Query: 193 GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNA 252
G +GL ++ +A GA RII D++ + + A+ LGA E + +D + ++
Sbjct: 201 GGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATE----CINPQDYKKPIQEVLKE 256
Query: 253 M-GSGIDVSFDCVG-FDKTMSTALNATRPGGKVCLIGLAKTEMTVALTP-----AAAREV 305
M G+D SF+ +G D M++ L G ++G+ +++ P +
Sbjct: 257 MTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQNLSINPMLLLTGRTWKG 316
Query: 306 DVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 365
V G F+ + P + + K + LITH F ++I + F++ G +I+ +
Sbjct: 317 AVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPF--EKINEGFDL-LHSGKSIRTVLT 373
Query: 366 L 366
Sbjct: 374 F 374
>pdb|1MGO|A Chain A, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant
pdb|1MGO|B Chain B, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant
Length = 374
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 158/372 (42%), Gaps = 45/372 (12%)
Query: 24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHEC 83
K I+ + +V++++ A GIC SD H + + P++ GHE
Sbjct: 19 KPFSIEEVEVAPPKAHEVRIKMVATGICRSDDH---------VVSGTLVTPLPVIAGHEA 69
Query: 84 AGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPT------- 136
AGI+E +G V ++ GD+V CG C +CK N C + T
Sbjct: 70 AGIVESIGEGVTTVRPGDKVIPLATPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSR 129
Query: 137 ---NGSLAHKVVHPAKLC-YKLPDNVSLEEGAMCEPL----------SVGV-HACRRANV 181
G H + + Y + D +S+ + PL S G A + A V
Sbjct: 130 FTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKV 189
Query: 182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIED 241
+ + G G +GL ++ +A GA RII D++ + + A+ +GA E + +D
Sbjct: 190 TQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE----CVNPQD 245
Query: 242 VDTDVGKIQNAMGS-GIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTVALTP 299
+ ++ M + G+D SF+ +G TM TAL+ + G ++G+ +++ P
Sbjct: 246 YKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNP 305
Query: 300 -----AAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISA 354
+ + G F+ + + P + + K + PLITH F ++I + F++
Sbjct: 306 MLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGFDL-L 362
Query: 355 QGGNAIKVMFNL 366
+ G +I+ +
Sbjct: 363 RSGESIRTILTF 374
>pdb|1HTB|A Chain A, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10
MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+
And 1 Mm 4-Iodopyrazole At 25 C
pdb|1HTB|B Chain B, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10
MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+
And 1 Mm 4-Iodopyrazole At 25 C
Length = 374
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 153/358 (42%), Gaps = 48/358 (13%)
Query: 38 PQDVKVRIK--ALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVK 95
P+ +VRIK A+GIC +D H + N + P+++GHE AGI+E VG V
Sbjct: 31 PKAYEVRIKMVAVGICRTDDH---------VVSGNLVTPLPVILGHEAAGIVESVGEGVT 81
Query: 96 SLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSP-----------PTNGSLAHKV 144
+++ GD+V CG C +CK N C + G+P G H
Sbjct: 82 TVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKND-LGNPRGTLQDGTRRFTCRGKPIHHF 140
Query: 145 VHPAKLC-YKLPDNVSLEEGAMCEPL----------SVGV-HACRRANVGPETNVMIMGS 192
+ + Y + D ++ + PL S G A A V P + + G
Sbjct: 141 LGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGL 200
Query: 193 GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNA 252
G +GL ++ +A GA RII D++ + + A+ LGA E + +D + ++
Sbjct: 201 GGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATE----CINPQDYKKPIQEVLKE 256
Query: 253 M-GSGIDVSFDCVG-FDKTMSTALNATRPGGKVCLIGLAKTEMTVALTP-----AAAREV 305
M G+D SF+ +G D M++ L G ++G+ +++ P +
Sbjct: 257 MTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQNLSINPMLLLTGRTWKG 316
Query: 306 DVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVM 363
V G F+ + P + + K + LITH F ++I + F++ G + V+
Sbjct: 317 AVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPF--EKINEGFDLLHSGKSICTVL 372
>pdb|1HDX|A Chain A, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|1HDX|B Chain B, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|3HUD|A Chain A, The Structure Of Human Beta 1 Beta 1 Alcohol
Dehydrogenase: Catalytic Effects Of Non-Active-Site
Substitutions
pdb|3HUD|B Chain B, The Structure Of Human Beta 1 Beta 1 Alcohol
Dehydrogenase: Catalytic Effects Of Non-Active-Site
Substitutions
pdb|1DEH|A Chain A, Crystallization Of Human Beta1 Alcohol Dehydrogenase (15
MgML) IN 50 MM SODIUM PHOSPHATE (PH 7.5), 2.0 MM NAD+
AND 1 Mm 4-Iodopyrazole At 25 Oc, 13% (WV) PEG 8000
pdb|1DEH|B Chain B, Crystallization Of Human Beta1 Alcohol Dehydrogenase (15
MgML) IN 50 MM SODIUM PHOSPHATE (PH 7.5), 2.0 MM NAD+
AND 1 Mm 4-Iodopyrazole At 25 Oc, 13% (WV) PEG 8000
pdb|1HSZ|A Chain A, Human Beta-1 Alcohol Dehydrogenase (Adh1b1)
pdb|1HSZ|B Chain B, Human Beta-1 Alcohol Dehydrogenase (Adh1b1)
pdb|1U3U|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-benzylformamide
Determined To 1.6 Angstrom Resolution
pdb|1U3U|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-benzylformamide
Determined To 1.6 Angstrom Resolution
pdb|1U3V|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-Heptylformamide
Determined To 1.65 Angstrom Resolution
pdb|1U3V|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-Heptylformamide
Determined To 1.65 Angstrom Resolution
Length = 374
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 154/361 (42%), Gaps = 49/361 (13%)
Query: 38 PQDVKVRIK--ALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVK 95
P+ +VRIK A+GIC +D H + N + P+++GHE AGI+E VG V
Sbjct: 31 PKAYEVRIKMVAVGICRTDDH---------VVSGNLVTPLPVILGHEAAGIVESVGEGVT 81
Query: 96 SLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSP-----------PTNGSLAHKV 144
+++ GD+V CG C +CK N C + G+P G H
Sbjct: 82 TVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKND-LGNPRGTLQDGTRRFTCRGKPIHHF 140
Query: 145 VHPAKLC-YKLPDNVSLEEGAMCEPL----------SVGV-HACRRANVGPETNVMIMGS 192
+ + Y + D ++ + PL S G A A V P + + G
Sbjct: 141 LGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGL 200
Query: 193 GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNA 252
G +GL ++ +A GA RII D++ + + A+ LGA E + +D + ++
Sbjct: 201 GGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATE----CINPQDYKKPIQEVLKE 256
Query: 253 M-GSGIDVSFDCVG-FDKTMSTALNATRPGGKVCLIGLAKTEMTVALTP-----AAAREV 305
M G+D SF+ +G D M++ L G ++G+ +++ P +
Sbjct: 257 MTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQNLSINPMLLLTGRTWKG 316
Query: 306 DVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 365
V G F+ + P + + K + LITH F ++I + F++ G +I+ +
Sbjct: 317 AVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPF--EKINEGFDL-LHSGKSIRTVLT 373
Query: 366 L 366
Sbjct: 374 F 374
>pdb|3COS|A Chain A, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
pdb|3COS|B Chain B, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
pdb|3COS|C Chain C, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
pdb|3COS|D Chain D, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
Length = 381
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 164/377 (43%), Gaps = 58/377 (15%)
Query: 18 AWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSD--VHHFKVKKLSTMRCANFIVKK 75
AW G K L I+ + +V+++I A +C +D V K + L+
Sbjct: 16 AWEAG-KPLCIEEVEVAPPKAHEVRIQIIATSLCHTDATVIDSKFEGLAF---------- 64
Query: 76 PMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPP 135
P+++GHE AGI+E +G V +++ GD+V C C C + NLC ++ SP
Sbjct: 65 PVIVGHEAAGIVESIGPGVTNVKPGDKVIPLYAPLCRKCKFCLSPLTNLCGKISNLKSPA 124
Query: 136 TNGSL-------------------------AHKVVHPAKLCYKLPDNVSLEEGAMCE-PL 169
++ L + VV L K+ D+ +LE +
Sbjct: 125 SDQQLMEDKTSRFTCKGKPVYHFFGTSTFSQYTVVSDINLA-KIDDDANLERVCLLGCGF 183
Query: 170 SVGVHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLG 228
S G A A V P + + G G +GL ++ +A GA RII D++ ++ A+ LG
Sbjct: 184 STGYGAAINNAKVTPGSTCAVFGLGGVGLSAVMGCKAAGASRIIGIDINSEKFVKAKALG 243
Query: 229 ADETAK---VSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVC- 284
A + + I++V ++ K G+D + DC G +TM AL+ T G C
Sbjct: 244 ATDCLNPRDLHKPIQEVIIELTK------GGVDFALDCAGGSETMKAALDCTTAGWGSCT 297
Query: 285 LIGLAKTEMTVALTPAA---AREVD--VIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRF 339
IG+A + + P R ++ G ++ + P + ++ K ++ L+TH
Sbjct: 298 FIGVAAGSKGLTVFPEELIIGRTINGTFFGGWKSVDSIPKLVTDYKNKKFNLDALVTHTL 357
Query: 340 GFTQKEIEDAFEISAQG 356
F + I +AF++ QG
Sbjct: 358 PFDK--ISEAFDLMNQG 372
>pdb|1AXE|A Chain A, Crystal Structure Of The Active-Site Mutant Phe93->trp Of
Horse Liver Alcohol Dehydrogenase In Complex With Nad
And Inhibitor Trifluoroethanol
pdb|1AXE|B Chain B, Crystal Structure Of The Active-Site Mutant Phe93->trp Of
Horse Liver Alcohol Dehydrogenase In Complex With Nad
And Inhibitor Trifluoroethanol
Length = 374
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 158/372 (42%), Gaps = 45/372 (12%)
Query: 24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHEC 83
K I+ + +V++++ A GIC SD H + + P++ GHE
Sbjct: 19 KPFSIEEVEVAPPKAHEVRIKMVATGICRSDDH---------VVSGTLVTPLPVIAGHEA 69
Query: 84 AGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPT------- 136
AGI+E +G V ++ GD+V CG C +CK N C + T
Sbjct: 70 AGIVESIGEGVTTVRPGDKVIPLWTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSR 129
Query: 137 ---NGSLAHKVVHPAKLC-YKLPDNVSLEEGAMCEPL----------SVGV-HACRRANV 181
G H + + Y + D +S+ + PL S G A + A V
Sbjct: 130 FTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKV 189
Query: 182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIED 241
+ + G G +GL ++ +A GA RII D++ + + A+ +GA E + +D
Sbjct: 190 TQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE----CVNPQD 245
Query: 242 VDTDVGKIQNAMGS-GIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTVALTP 299
+ ++ M + G+D SF+ +G TM TAL+ + G ++G+ +++ P
Sbjct: 246 YKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNP 305
Query: 300 -----AAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISA 354
+ + G F+ + + P + + K + PLITH F ++I + F++
Sbjct: 306 MLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGFDL-L 362
Query: 355 QGGNAIKVMFNL 366
+ G +I+ +
Sbjct: 363 RSGESIRTILTF 374
>pdb|6ADH|A Chain A, Structure Of Triclinic Ternary Complex Of Horse Liver
Alcohol Dehydrogenase At 2.9 Angstroms Resolution
pdb|6ADH|B Chain B, Structure Of Triclinic Ternary Complex Of Horse Liver
Alcohol Dehydrogenase At 2.9 Angstroms Resolution
pdb|2OHX|A Chain A, Refined Crystal Structure Of Liver Alcohol Dehydrogenase-
Nadh Complex At 1.8 Angstroms Resolution
pdb|2OHX|B Chain B, Refined Crystal Structure Of Liver Alcohol Dehydrogenase-
Nadh Complex At 1.8 Angstroms Resolution
pdb|2OXI|A Chain A, Refined Crystal Structure Of Cu-Substituted Alcohol
Dehydrogenase At 2.1 Angstroms Resolution
pdb|2OXI|B Chain B, Refined Crystal Structure Of Cu-Substituted Alcohol
Dehydrogenase At 2.1 Angstroms Resolution
pdb|1HLD|A Chain A, Structures Of Horse Liver Alcohol Dehydrogenase Complexed
With Nad+ And Substituted Benzyl Alcohols
pdb|1HLD|B Chain B, Structures Of Horse Liver Alcohol Dehydrogenase Complexed
With Nad+ And Substituted Benzyl Alcohols
pdb|1ADB|A Chain A, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|1ADB|B Chain B, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|1ADC|A Chain A, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|1ADC|B Chain B, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|3BTO|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|3BTO|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|3BTO|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|3BTO|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|1LDY|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDY|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDY|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDY|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDE|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1LDE|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1LDE|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1LDE|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1BTO|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1BTO|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1BTO|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1BTO|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1HET|A Chain A, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing A Hydroxide Adduct To Nadh
pdb|1HET|B Chain B, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing A Hydroxide Adduct To Nadh
pdb|1HEU|A Chain A, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1HEU|B Chain B, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1HF3|A Chain A, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1HF3|B Chain B, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1MG0|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1MG0|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1MG0|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1MG0|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1N92|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
4- Iodopyrazole
pdb|1N92|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
4- Iodopyrazole
pdb|1P1R|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1P1R|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1P1R|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1P1R|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1YE3|A Chain A, Horse Liver Alcohol Dehydrogenase Apoenzyme
pdb|2JHF|A Chain A, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|2JHF|B Chain B, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|2JHG|A Chain A, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|2JHG|B Chain B, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|1ADF|A Chain A, Crystallographic Studies Of Two Alcohol
Dehydrogenase-Bound Analogs Of Thiazole-4-Carboxamide
Adenine Dinucleotide (Tad), The Active Anabolite Of The
Antitumor Agent Tiazofurin
pdb|1ADG|A Chain A, Crystallographic Studies Of Two Alcohol
Dehydrogenase-Bound Analogs Of Thiazole-4-Carboxamide
Adenine Dinucleotide (Tad), The Active Anabolite Of The
Antitumor Agent Tiazofurin
pdb|5ADH|A Chain A, Interdomain Motion In Liver Alcohol Dehydrogenase.
Structural And Energetic Analysis Of The Hinge Bending
Mode
pdb|7ADH|A Chain A, Three-Dimensional Structure Of Isonicotinimidylated Liver
Alcohol Dehydrogenase
pdb|8ADH|A Chain A, Interdomain Motion In Liver Alcohol Dehydrogenase.
Structural And Energetic Analysis Of The Hinge Bending
Mode
pdb|4DWV|A Chain A, Horse Alcohol Dehydrogenase Complexed With Nad+ And
2,3,4,5,6- Pentafluorobenzyl Alcohol
pdb|4DWV|B Chain B, Horse Alcohol Dehydrogenase Complexed With Nad+ And
2,3,4,5,6- Pentafluorobenzyl Alcohol
pdb|4DXH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2,2,2- Trifluoroethanol
pdb|4DXH|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2,2,2- Trifluoroethanol
Length = 374
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 159/376 (42%), Gaps = 53/376 (14%)
Query: 24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHEC 83
K I+ + +V++++ A GIC SD H + + P++ GHE
Sbjct: 19 KPFSIEEVEVAPPKAHEVRIKMVATGICRSDDH---------VVSGTLVTPLPVIAGHEA 69
Query: 84 AGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE--------------MR 129
AGI+E +G V ++ GD+V CG C +CK N C + R
Sbjct: 70 AGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSR 129
Query: 130 FFGSPPTNGSLAHKVVHPAKLC-YKLPDNVSLEEGAMCEPL----------SVGV-HACR 177
F G H + + Y + D +S+ + PL S G A +
Sbjct: 130 F----TCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVK 185
Query: 178 RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVST 237
A V + + G G +GL ++ +A GA RII D++ + + A+ +GA E
Sbjct: 186 VAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE----CV 241
Query: 238 DIEDVDTDVGKIQNAMGS-GIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTV 295
+ +D + ++ M + G+D SF+ +G TM TAL+ + G ++G+ +
Sbjct: 242 NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNL 301
Query: 296 ALTP-----AAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAF 350
++ P + + G F+ + + P + + K + PLITH F ++I + F
Sbjct: 302 SMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGF 359
Query: 351 EISAQGGNAIKVMFNL 366
++ + G +I+ +
Sbjct: 360 DL-LRSGESIRTILTF 374
>pdb|1JU9|A Chain A, Horse Liver Alcohol Dehydrogenase Val292ser Mutant
pdb|1JU9|B Chain B, Horse Liver Alcohol Dehydrogenase Val292ser Mutant
Length = 374
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 159/376 (42%), Gaps = 53/376 (14%)
Query: 24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHEC 83
K I+ + +V++++ A GIC SD H + + P++ GHE
Sbjct: 19 KPFSIEEVEVAPPKAHEVRIKMVATGICRSDDH---------VVSGTLVTPLPVIAGHEA 69
Query: 84 AGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE--------------MR 129
AGI+E +G V ++ GD+V CG C +CK N C + R
Sbjct: 70 AGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSR 129
Query: 130 FFGSPPTNGSLAHKVVHPAKLC-YKLPDNVSLEEGAMCEPL----------SVGV-HACR 177
F G H + + Y + D +S+ + PL S G A +
Sbjct: 130 F----TCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVK 185
Query: 178 RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVST 237
A V + + G G +GL ++ +A GA RII D++ + + A+ +GA E
Sbjct: 186 VAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE----CV 241
Query: 238 DIEDVDTDVGKIQNAMGS-GIDVSFDCVGFDKTMSTALNATRPGGKVCLI-GLAKTEMTV 295
+ +D + ++ M + G+D SF+ +G TM TAL+ + V +I G+ +
Sbjct: 242 NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVISGVPPDSQNL 301
Query: 296 ALTP-----AAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAF 350
++ P + + G F+ + + P + + K + PLITH F ++I + F
Sbjct: 302 SMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGF 359
Query: 351 EISAQGGNAIKVMFNL 366
++ + G +I+ +
Sbjct: 360 DL-LRSGESIRTILTF 374
>pdb|1N8K|A Chain A, Horse Liver Alcohol Dehydrogenase Val292thr Mutant
Complexed To Nad+ And Pyrazole
pdb|1N8K|B Chain B, Horse Liver Alcohol Dehydrogenase Val292thr Mutant
Complexed To Nad+ And Pyrazole
Length = 374
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 159/376 (42%), Gaps = 53/376 (14%)
Query: 24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHEC 83
K I+ + +V++++ A GIC SD H + + P++ GHE
Sbjct: 19 KPFSIEEVEVAPPKAHEVRIKMVATGICRSDDH---------VVSGTLVTPLPVIAGHEA 69
Query: 84 AGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE--------------MR 129
AGI+E +G V ++ GD+V CG C +CK N C + R
Sbjct: 70 AGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSR 129
Query: 130 FFGSPPTNGSLAHKVVHPAKLC-YKLPDNVSLEEGAMCEPL----------SVGV-HACR 177
F G H + + Y + D +S+ + PL S G A +
Sbjct: 130 F----TCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVK 185
Query: 178 RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVST 237
A V + + G G +GL ++ +A GA RII D++ + + A+ +GA E
Sbjct: 186 VAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE----CV 241
Query: 238 DIEDVDTDVGKIQNAMGS-GIDVSFDCVGFDKTMSTALNATRPGGKVCLI-GLAKTEMTV 295
+ +D + ++ M + G+D SF+ +G TM TAL+ + V +I G+ +
Sbjct: 242 NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVITGVPPDSQNL 301
Query: 296 ALTP-----AAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAF 350
++ P + + G F+ + + P + + K + PLITH F ++I + F
Sbjct: 302 SMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGF 359
Query: 351 EISAQGGNAIKVMFNL 366
++ + G +I+ +
Sbjct: 360 DL-LRSGESIRTILTF 374
>pdb|1HSO|A Chain A, Human Alpha Alcohol Dehydrogenase (Adh1a)
pdb|1HSO|B Chain B, Human Alpha Alcohol Dehydrogenase (Adh1a)
pdb|1U3T|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Alpha-
Alpha Isoform Complexed With N-Cyclopentyl-N-
Cyclobutylformamide Determined To 2.5 Angstrom
Resolution
pdb|1U3T|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Alpha-
Alpha Isoform Complexed With N-Cyclopentyl-N-
Cyclobutylformamide Determined To 2.5 Angstrom
Resolution
Length = 374
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 162/378 (42%), Gaps = 52/378 (13%)
Query: 19 WLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMV 78
W L K I+ + +V++++ A+GICG+D H + + P++
Sbjct: 15 WELK-KPFSIEEVEVAPPKAHEVRIKMVAVGICGTDDH---------VVSGTMVTPLPVI 64
Query: 79 IGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNG 138
+GHE AGI+E VG V +++ GD+V CG C +CK N C ++ S P G
Sbjct: 65 LGHEAAGIVESVGEGVTTVKPGDKVIPLAIPQCGKCRICKNPESNYC--LKNDVSNP-QG 121
Query: 139 SLA---------HKVVHPAKLCYKLPDNVSLEEGAMCE-----PL----------SVGV- 173
+L K +H ++E A+ + PL S G
Sbjct: 122 TLQDGTSRFTCRRKPIHHFLGISTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYG 181
Query: 174 HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETA 233
A A V P + + G G +GL ++ +A GA RII D++ + + A+ LGA E
Sbjct: 182 SAVNVAKVTPGSTCAVFGLGGVGLSAIMGCKAAGAARIIAVDINKDKFAKAKELGATE-- 239
Query: 234 KVSTDIEDVDTDVGKIQNAM-GSGIDVSFDCVG-FDKTMSTALNATRPGGKVCLIGLAKT 291
+ +D + ++ M G+D SF+ +G D M++ L G ++G+
Sbjct: 240 --CINPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPD 297
Query: 292 EMTVALTP-----AAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEI 346
+++ P + ++G F+ + P + + K + LITH F ++I
Sbjct: 298 SQNLSMNPMLLLTGRTWKGAILGGFKSKECVPKLVADFMAKKFSLDALITHVLPF--EKI 355
Query: 347 EDAFEISAQGGNAIKVMF 364
+ F++ G +I+ +
Sbjct: 356 NEGFDL-LHSGKSIRTIL 372
>pdb|3OQ6|A Chain A, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed
With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol
pdb|3OQ6|B Chain B, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed
With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol
Length = 374
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 160/376 (42%), Gaps = 53/376 (14%)
Query: 24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHEC 83
K I+ + +V++++ A GIC SD H + + P++ GHE
Sbjct: 19 KPFSIEEVEVAPPKAHEVRIKMVATGICRSDDH---------VVSGTLVTPLPVIAGHEA 69
Query: 84 AGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE--------------MR 129
AGI+E +G V ++ GD+V CG C +CK N C + R
Sbjct: 70 AGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSR 129
Query: 130 FFGSPPTNGSLAHKVVHPAKLC-YKLPDNVSLEEGAMCEPL----------SVGV-HACR 177
F G H + + Y + D +S+ + PL S G A +
Sbjct: 130 F----TCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVK 185
Query: 178 RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVST 237
A V + + G G +GL ++ +A GA RII D++ + + A+ +GA E
Sbjct: 186 VAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE----CV 241
Query: 238 DIEDVDTDVGKIQNAMGS-GIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTV 295
+ +D + ++ M + G+D SF+ +G TM TAL+ + G ++G+ +
Sbjct: 242 NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNL 301
Query: 296 ALTPA---AAREVD--VIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAF 350
++ P + R + G F+ + + P + + K + PLITH F ++I + F
Sbjct: 302 SMNPMLLLSGRTWKGCIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGF 359
Query: 351 EISAQGGNAIKVMFNL 366
++ + G +I+ +
Sbjct: 360 DL-LRSGESIRTILTF 374
>pdb|1QV6|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,4-Difluorobenzyl Alcohol
pdb|1QV6|B Chain B, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,4-Difluorobenzyl Alcohol
pdb|1QV7|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,3-Difluorobenzyl Alcohol
pdb|1QV7|B Chain B, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,3-Difluorobenzyl Alcohol
Length = 374
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 158/376 (42%), Gaps = 53/376 (14%)
Query: 24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHEC 83
K I+ + +V++++ A GIC SD + + P++ GHE
Sbjct: 19 KPFSIEEVEVAPPKAHEVRIKMVATGICRSD---------DQVVSGTLVTPLPVIAGHEA 69
Query: 84 AGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE--------------MR 129
AGI+E +G V ++ GD+V CG C +CK N C + R
Sbjct: 70 AGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSR 129
Query: 130 FFGSPPTNGSLAHKVVHPAKLC-YKLPDNVSLEEGAMCEPL----------SVGV-HACR 177
F G H + + Y + D +S+ + PL S G A +
Sbjct: 130 F----TCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVK 185
Query: 178 RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVST 237
A V + + G G +GL ++ +A GA RII D++ R + A+ +GA E
Sbjct: 186 VAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDRFAKAKEVGATE----CV 241
Query: 238 DIEDVDTDVGKIQNAMGS-GIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTV 295
+ +D + ++ M + G+D SF+ +G TM TAL+ + G ++G+ +
Sbjct: 242 NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNL 301
Query: 296 ALTP-----AAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAF 350
++ P + + G F+ + + P + + K + PLITH F ++I + F
Sbjct: 302 SMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGF 359
Query: 351 EISAQGGNAIKVMFNL 366
++ + G +I+ +
Sbjct: 360 DL-LRSGESIRTILTF 374
>pdb|1A71|A Chain A, Ternary Complex Of An Active Site Double Mutant Of Horse
Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With
Nad And Trifluoroethanol
pdb|1A71|B Chain B, Ternary Complex Of An Active Site Double Mutant Of Horse
Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With
Nad And Trifluoroethanol
pdb|1A72|A Chain A, An Active-Site Double Mutant (Phe93->trp, Val203->ala) Of
Horse Liver Alcohol Dehydrogenase In Complex With The
Isosteric Nad Analog Cpad
Length = 374
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 157/372 (42%), Gaps = 45/372 (12%)
Query: 24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHEC 83
K I+ + +V++++ A GIC SD H + + P++ GHE
Sbjct: 19 KPFSIEEVEVAPPKAHEVRIKMVATGICRSDDH---------VVSGTLVTPLPVIAGHEA 69
Query: 84 AGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPT------- 136
AGI+E +G V ++ GD+V CG C +CK N C + T
Sbjct: 70 AGIVESIGEGVTTVRPGDKVIPLWTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSR 129
Query: 137 ---NGSLAHKVVHPAKLC-YKLPDNVSLEEGAMCEPL----------SVGV-HACRRANV 181
G H + + Y + D +S+ + PL S G A + A V
Sbjct: 130 FTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKV 189
Query: 182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIED 241
+ + G G GL ++ +A GA RII D++ + + A+ +GA E + +D
Sbjct: 190 TQGSTCAVFGLGGAGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE----CVNPQD 245
Query: 242 VDTDVGKIQNAMGS-GIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTVALTP 299
+ ++ M + G+D SF+ +G TM TAL+ + G ++G+ +++ P
Sbjct: 246 YKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNP 305
Query: 300 -----AAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISA 354
+ + G F+ + + P + + K + PLITH F ++I + F++
Sbjct: 306 MLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGFDL-L 362
Query: 355 QGGNAIKVMFNL 366
+ G +I+ +
Sbjct: 363 RSGESIRTILTF 374
>pdb|1AXG|A Chain A, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
pdb|1AXG|B Chain B, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
pdb|1AXG|C Chain C, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
pdb|1AXG|D Chain D, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
Length = 374
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 158/376 (42%), Gaps = 53/376 (14%)
Query: 24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHEC 83
K I+ + +V++++ A GIC SD H + + P++ GHE
Sbjct: 19 KPFSIEEVEVAPPKAHEVRIKMVATGICRSDDH---------VVSGTLVTPLPVIAGHEA 69
Query: 84 AGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE--------------MR 129
AGI+E +G V ++ GD+V CG C +CK N C + R
Sbjct: 70 AGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSR 129
Query: 130 FFGSPPTNGSLAHKVVHPAKLC-YKLPDNVSLEEGAMCEPL----------SVGV-HACR 177
F G H + + Y + D +S+ + PL S G A +
Sbjct: 130 F----TCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVK 185
Query: 178 RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVST 237
A V + + G G GL ++ +A GA RII D++ + + A+ +GA E
Sbjct: 186 VAKVTQGSTCAVFGLGGAGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE----CV 241
Query: 238 DIEDVDTDVGKIQNAMGS-GIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTV 295
+ +D + ++ M + G+D SF+ +G TM TAL+ + G ++G+ +
Sbjct: 242 NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNL 301
Query: 296 ALTP-----AAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAF 350
++ P + + G F+ + + P + + K + PLITH F ++I + F
Sbjct: 302 SMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGF 359
Query: 351 EISAQGGNAIKVMFNL 366
++ + G +I+ +
Sbjct: 360 DL-LRSGESIRTILTF 374
>pdb|1QLH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nad Double
Mutant Of Gly 293 Ala And Pro 295 Thr
pdb|1QLJ|A Chain A, Horse Liver Alcohol Dehydrogenase Apo Enzyme Double Mutant
Of Gly 293 Ala And Pro 295 Thr
Length = 374
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 86/372 (23%), Positives = 157/372 (42%), Gaps = 45/372 (12%)
Query: 24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHEC 83
K I+ + +V++++ A GIC SD H + + P++ GHE
Sbjct: 19 KPFSIEEVEVAPPKAHEVRIKMVATGICRSDDH---------VVSGTLVTPLPVIAGHEA 69
Query: 84 AGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPT------- 136
AGI+E +G V ++ GD+V CG C +CK N C + T
Sbjct: 70 AGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSR 129
Query: 137 ---NGSLAHKVVHPAKLC-YKLPDNVSLEEGAMCEPL----------SVGV-HACRRANV 181
G H + + Y + D +S+ + PL S G A + A V
Sbjct: 130 FTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKV 189
Query: 182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIED 241
+ + G G +GL ++ +A GA RII D++ + + A+ +GA E + +D
Sbjct: 190 TQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE----CVNPQD 245
Query: 242 VDTDVGKIQNAMGS-GIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTVALTP 299
+ ++ M + G+D SF+ +G TM TAL+ + G ++ + +++ P
Sbjct: 246 YKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVAVTPDSQNLSMNP 305
Query: 300 -----AAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISA 354
+ + G F+ + + P + + K + PLITH F ++I + F++
Sbjct: 306 MLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGFDL-L 362
Query: 355 QGGNAIKVMFNL 366
+ G +I+ +
Sbjct: 363 RSGESIRTILTF 374
>pdb|1F8F|A Chain A, Crystal Structure Of Benzyl Alcohol Dehydrogenase From
Acinetobacter Calcoaceticus
Length = 371
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 128/279 (45%), Gaps = 47/279 (16%)
Query: 38 PQ--DVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVK 95
PQ +V V++ A G+C +D+ +R + V P V+GHE +GIIE +G V
Sbjct: 29 PQGDEVLVKVVATGMCHTDL---------IVRDQKYPVPLPAVLGHEGSGIIEAIGPNVT 79
Query: 96 SLEVGDRVALEPGISCGHCSLCKAGSYNLCPEM--RFFGSPPTNGSLA-----------H 142
L+VGD V L G CG C+ C G+ C E R F + G+ A H
Sbjct: 80 ELQVGDHVVLSYGY-CGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDH 138
Query: 143 KVVHPAKLCY---------KLPDNVSLEEGAMCEPLSVGVH----ACRRA-NVGPETNVM 188
+ Y K+ +V +E + PL G+ AC A V P ++ +
Sbjct: 139 FFAQSSFATYALSRENNTVKVTKDVPIE---LLGPLGCGIQTGAGACINALKVTPASSFV 195
Query: 189 IMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGK 248
G+G +GL LLAA+ GA II D+ RL +A+ LGA T +++ +D V
Sbjct: 196 TWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGA--THVINSKTQD---PVAA 250
Query: 249 IQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIG 287
I+ G++ + + G + + ++A GK+ ++G
Sbjct: 251 IKEITDGGVNFALESTGSPEILKQGVDALGILGKIAVVG 289
>pdb|1MC5|A Chain A, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With
S-(Hydroxymethyl)glutathione And Nadh
pdb|1MC5|B Chain B, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With
S-(Hydroxymethyl)glutathione And Nadh
Length = 374
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 97/382 (25%), Positives = 153/382 (40%), Gaps = 52/382 (13%)
Query: 8 DEGDKNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMR 67
+E K + AW G K L I+ + +V+++I A +C +D + T+
Sbjct: 3 NEVIKCKAAVAWEAG-KPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAY--------TLS 53
Query: 68 CANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 127
A+ P+++GHE AGI+E VG V L+ GD V CG C C NLC +
Sbjct: 54 GADPEGCFPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQK 113
Query: 128 MRFF---GSPPTNGS--------LAHKVVHPAKLCYKLPDNVSLEEGAMCEPL------- 169
+R G P S + H + Y + ++S+ + PL
Sbjct: 114 IRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLG 173
Query: 170 ---SVGV-HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR 225
S G A A + P + + G G +GL ++ + GA RII D++ + + A+
Sbjct: 174 CGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAK 233
Query: 226 NLGADETAKVSTDIEDVDTDVGKIQNAM-GSGIDVSFDCVGFDKTMSTALNATRPGGKVC 284
GA E + +D + ++ M G+D SF+C+G K M AL A G
Sbjct: 234 EFGATE----CINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKG---- 285
Query: 285 LIGLAKTEMTVALTPAAAREVDVIGIFRYRST----W------PLCIEFLRSGKIDVKPL 334
+ + A R ++ ++ T W P + S KI V
Sbjct: 286 WGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEF 345
Query: 335 ITHRFGFTQKEIEDAFEISAQG 356
+TH F EI AFE+ G
Sbjct: 346 VTHNLSF--DEINKAFELMHSG 365
>pdb|3QJ5|A Chain A, S-Nitrosoglutathione Reductase (Gsnor) In Complex With
N6022
pdb|3QJ5|B Chain B, S-Nitrosoglutathione Reductase (Gsnor) In Complex With
N6022
Length = 374
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 97/382 (25%), Positives = 153/382 (40%), Gaps = 52/382 (13%)
Query: 8 DEGDKNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMR 67
+E K + AW G K L I+ + +V+++I A +C +D + T+
Sbjct: 3 NEVIKCKAAVAWEAG-KPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAY--------TLS 53
Query: 68 CANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 127
A+ P+++GHE AGI+E VG V L+ GD V CG C C NLC +
Sbjct: 54 GADPEGCFPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQK 113
Query: 128 MRFF---GSPPTNGS--------LAHKVVHPAKLCYKLPDNVSLEEGAMCEPL------- 169
+R G P S + H + Y + ++S+ + PL
Sbjct: 114 IRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLG 173
Query: 170 ---SVGV-HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR 225
S G A A + P + + G G +GL ++ + GA RII D++ + + A+
Sbjct: 174 CGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAK 233
Query: 226 NLGADETAKVSTDIEDVDTDVGKIQNAM-GSGIDVSFDCVGFDKTMSTALNATRPGGKVC 284
GA E + +D + ++ M G+D SF+C+G K M AL A G
Sbjct: 234 EFGATE----CINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKG---- 285
Query: 285 LIGLAKTEMTVALTPAAAREVDVIGIFRYRST----W------PLCIEFLRSGKIDVKPL 334
+ + A R ++ ++ T W P + S KI V
Sbjct: 286 WGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEF 345
Query: 335 ITHRFGFTQKEIEDAFEISAQG 356
+TH F EI AFE+ G
Sbjct: 346 VTHNLSF--DEINKAFELMHSG 365
>pdb|1TEH|A Chain A, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A
Glutathione- Dependent Formaldehyde Dehydrogenase)
pdb|1TEH|B Chain B, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A
Glutathione- Dependent Formaldehyde Dehydrogenase)
pdb|1M6H|A Chain A, Human Glutathione-Dependent Formaldehyde Dehydrogenase
pdb|1M6H|B Chain B, Human Glutathione-Dependent Formaldehyde Dehydrogenase
pdb|1M6W|A Chain A, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase And 12-Hydroxydodecanoic Acid
pdb|1M6W|B Chain B, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase And 12-Hydroxydodecanoic Acid
pdb|1MA0|A Chain A, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With Nad+ And Dodecanoic Acid
pdb|1MA0|B Chain B, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With Nad+ And Dodecanoic Acid
pdb|1MP0|A Chain A, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase With Nad(H)
pdb|1MP0|B Chain B, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase With Nad(H)
pdb|2FZE|A Chain A, Crystal Structure Of The Binary Complex Of Human
Glutathione-Dependent Formaldehyde Dehydrogenase With
Adp- Ribose
pdb|2FZE|B Chain B, Crystal Structure Of The Binary Complex Of Human
Glutathione-Dependent Formaldehyde Dehydrogenase With
Adp- Ribose
Length = 373
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 97/382 (25%), Positives = 153/382 (40%), Gaps = 52/382 (13%)
Query: 8 DEGDKNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMR 67
+E K + AW G K L I+ + +V+++I A +C +D + T+
Sbjct: 2 NEVIKCKAAVAWEAG-KPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAY--------TLS 52
Query: 68 CANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 127
A+ P+++GHE AGI+E VG V L+ GD V CG C C NLC +
Sbjct: 53 GADPEGCFPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQK 112
Query: 128 MRFF---GSPPTNGS--------LAHKVVHPAKLCYKLPDNVSLEEGAMCEPL------- 169
+R G P S + H + Y + ++S+ + PL
Sbjct: 113 IRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLG 172
Query: 170 ---SVGV-HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR 225
S G A A + P + + G G +GL ++ + GA RII D++ + + A+
Sbjct: 173 CGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAK 232
Query: 226 NLGADETAKVSTDIEDVDTDVGKIQNAM-GSGIDVSFDCVGFDKTMSTALNATRPGGKVC 284
GA E + +D + ++ M G+D SF+C+G K M AL A G
Sbjct: 233 EFGATE----CINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKG---- 284
Query: 285 LIGLAKTEMTVALTPAAAREVDVIGIFRYRST----W------PLCIEFLRSGKIDVKPL 334
+ + A R ++ ++ T W P + S KI V
Sbjct: 285 WGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEF 344
Query: 335 ITHRFGFTQKEIEDAFEISAQG 356
+TH F EI AFE+ G
Sbjct: 345 VTHNLSF--DEINKAFELMHSG 364
>pdb|1CDO|A Chain A, Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Complexed
With Nicotinamide Adenine Dinucleotide (Nad), And Zinc
pdb|1CDO|B Chain B, Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Complexed
With Nicotinamide Adenine Dinucleotide (Nad), And Zinc
Length = 374
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 86/374 (22%), Positives = 150/374 (40%), Gaps = 49/374 (13%)
Query: 24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHH-FKVKKLSTMRCANFIVKKPMVIGHE 82
K L I+ + +++++I A G+C +D++H F+ K P+V+GHE
Sbjct: 19 KPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDGF---------PVVLGHE 69
Query: 83 CAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE--------------- 127
AGI+E VG V + G++V CG C C++ N C +
Sbjct: 70 GAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKET 129
Query: 128 ---------MRFFGSPPTNGSLAHKVVHPAKLCYKLP-DNVSLEEGAMCEPLSVGVHACR 177
++F G+ + + AK+ P D V L + V+
Sbjct: 130 RFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCLLGCGVSTGFGAAVNT-- 187
Query: 178 RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVST 237
A V P + + G G +GL ++ + GA RII D++ + A+ GA + +
Sbjct: 188 -AKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPND 246
Query: 238 DIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAK----TE 292
E + + K+ N G+D S +CVG M AL + G G L+G
Sbjct: 247 HSEPISQVLSKMTNG---GVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVAT 303
Query: 293 MTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEI 352
+ L + + G F+ + P ++ K+ + ITHR + + DA ++
Sbjct: 304 RPIQLIAGRTWKGSMFGGFKGKDGVPKMVKAYLDKKVKLDEFITHRMPL--ESVNDAIDL 361
Query: 353 SAQGGNAIKVMFNL 366
G I+ + +L
Sbjct: 362 MKH-GKCIRTVLSL 374
>pdb|2FZW|A Chain A, Structure Of The Binary Complex Of The E67l Mutant Of
Human Glutathione-Dependent Formaldehyde Dehydrogenase
With Nad(H)
pdb|2FZW|B Chain B, Structure Of The Binary Complex Of The E67l Mutant Of
Human Glutathione-Dependent Formaldehyde Dehydrogenase
With Nad(H)
Length = 373
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 152/382 (39%), Gaps = 52/382 (13%)
Query: 8 DEGDKNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMR 67
+E K + AW G K L I+ + +V+++I A +C +D + T+
Sbjct: 2 NEVIKCKAAVAWEAG-KPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAY--------TLS 52
Query: 68 CANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 127
A+ P+++GH AGI+E VG V L+ GD V CG C C NLC +
Sbjct: 53 GADPEGCFPVILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQK 112
Query: 128 MRFF---GSPPTNGS--------LAHKVVHPAKLCYKLPDNVSLEEGAMCEPL------- 169
+R G P S + H + Y + ++S+ + PL
Sbjct: 113 IRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLG 172
Query: 170 ---SVGV-HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR 225
S G A A + P + + G G +GL ++ + GA RII D++ + + A+
Sbjct: 173 CGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAK 232
Query: 226 NLGADETAKVSTDIEDVDTDVGKIQNAM-GSGIDVSFDCVGFDKTMSTALNATRPGGKVC 284
GA E + +D + ++ M G+D SF+C+G K M AL A G
Sbjct: 233 EFGATE----CINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKG---- 284
Query: 285 LIGLAKTEMTVALTPAAAREVDVIGIFRYRST----W------PLCIEFLRSGKIDVKPL 334
+ + A R ++ ++ T W P + S KI V
Sbjct: 285 WGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEF 344
Query: 335 ITHRFGFTQKEIEDAFEISAQG 356
+TH F EI AFE+ G
Sbjct: 345 VTHNLSF--DEINKAFELMHSG 364
>pdb|1P0C|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Vertebrate
Alcohol Dehydrogenase (Adh8)
pdb|1P0C|B Chain B, Crystal Structure Of The Nadp(H)-Dependent Vertebrate
Alcohol Dehydrogenase (Adh8)
pdb|1P0F|A Chain A, Crystal Structure Of The Binary Complex: Nadp(H)-Dependent
Vertebrate Alcohol Dehydrogenase (Adh8) With The
Cofactor Nadp
pdb|1P0F|B Chain B, Crystal Structure Of The Binary Complex: Nadp(H)-Dependent
Vertebrate Alcohol Dehydrogenase (Adh8) With The
Cofactor Nadp
Length = 373
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 152/372 (40%), Gaps = 49/372 (13%)
Query: 21 LGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIG 80
L ++T+ + P +V+++I A GICGSD K S K P+++G
Sbjct: 22 LSLETITVAPPK-----AHEVRIKILASGICGSDSSVLKEIIPS---------KFPVILG 67
Query: 81 HECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSL 140
HE G++E +G+ V ++ GD+V CG C CK+ + N C + +
Sbjct: 68 HEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADM 127
Query: 141 AHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVG-------VHAC--------------RRA 179
+ K Y L + E + ++V + +C A
Sbjct: 128 TSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKAPLESCLIGCGFATGYGAAVNTA 187
Query: 180 NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDI 239
V P + + G G +G ++ +A GA RII + A LGA E +
Sbjct: 188 KVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATE----CLNP 243
Query: 240 EDVDTDVGK-IQNAMGSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAK-----TE 292
+D D + + I G+D + +C G +TM AL +T G G ++GLA
Sbjct: 244 KDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPL 303
Query: 293 MTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEI 352
+ L + + V G F+ L ++++ KI+V L++ + T +I AFE+
Sbjct: 304 DPLLLLTGRSLKGSVFGGFKGEEVSRLVDDYMKK-KINVNFLVSTK--LTLDQINKAFEL 360
Query: 353 SAQGGNAIKVMF 364
+ G +M
Sbjct: 361 LSSGQGVRSIMI 372
>pdb|1D1T|A Chain A, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
pdb|1D1T|B Chain B, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
pdb|1D1T|C Chain C, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
pdb|1D1T|D Chain D, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
Length = 373
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 151/357 (42%), Gaps = 46/357 (12%)
Query: 39 QDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLE 98
++V+++I A GIC +D H K + K P+++GHE GI+E +G V +++
Sbjct: 34 KEVRIKILATGICRTDDHVIK---------GTMVSKFPVIVGHEATGIVESIGEGVTTVK 84
Query: 99 VGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSP---------PTNGSLAHKVVHPAK 149
GD+V C C+ C+ NLC G G H ++ +
Sbjct: 85 PGDKVIPLFLPQCRECNACRNPDGNLCIRSDITGRGVLADGTTRFTCKGKPVHHFLNTST 144
Query: 150 LC-YKLPDNVSLEEGAMCEP----------LSVGV-HACRRANVGPETNVMIMGSGPIGL 197
Y + D S+ + P S G A + V P + ++ G G +GL
Sbjct: 145 FTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGL 204
Query: 198 VTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM-GSG 256
++ ++ GA RII D++ + A +GA E +D + ++ + M G+
Sbjct: 205 SVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATE----CISPKDSTKPISEVLSEMTGNN 260
Query: 257 IDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTVALTP-----AAAREVDVIGI 310
+ +F+ +G +TM AL + G ++G+ + + P + V G
Sbjct: 261 VGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKMLTYDPMLLFTGRTWKGCVFGG 320
Query: 311 FRYRSTWP-LCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 366
+ R P L EFL + K D+ LITH F K+I + FE+ G +I+ +
Sbjct: 321 LKSRDDVPKLVTEFL-AKKFDLDQLITHVLPF--KKISEGFEL-LNSGQSIRTVLTF 373
>pdb|1AGN|A Chain A, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1AGN|B Chain B, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1AGN|C Chain C, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1AGN|D Chain D, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1D1S|A Chain A, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
pdb|1D1S|B Chain B, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
pdb|1D1S|C Chain C, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
pdb|1D1S|D Chain D, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
Length = 373
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 152/357 (42%), Gaps = 46/357 (12%)
Query: 39 QDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLE 98
++V+++I A GIC +D H K + K P+++GHE GI+E +G V +++
Sbjct: 34 KEVRIKILATGICRTDDHVIK---------GTMVSKFPVIVGHEATGIVESIGEGVTTVK 84
Query: 99 VGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFG-----SPPTNGSLAHKVVHPAKLCYK 153
GD+V C C+ C+ NLC G T + K VH
Sbjct: 85 PGDKVIPLFLPQCRECNACRNPDGNLCIRSDITGRGVLADGTTRFTCKGKPVHHFMNTST 144
Query: 154 LPDNVSLEEGAMCE------PLSVGVHAC----------RRANVGPETNVMIMGSGPIGL 197
+ ++E ++ + P V + C + V P + ++ G G +GL
Sbjct: 145 FTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGL 204
Query: 198 VTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM-GSG 256
++ ++ GA RII D++ + A +GA E +D + ++ + M G+
Sbjct: 205 SVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATE----CISPKDSTKPISEVLSEMTGNN 260
Query: 257 IDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTVALTP-----AAAREVDVIGI 310
+ +F+ +G +TM AL + G ++G+ + + P + V G
Sbjct: 261 VGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKMLTYDPMLLFTGRTWKGCVFGG 320
Query: 311 FRYRSTWP-LCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 366
+ R P L EFL + K D+ LITH F K+I + FE+ G +I+ +
Sbjct: 321 LKSRDDVPKLVTEFL-AKKFDLDQLITHVLPF--KKISEGFEL-LNSGQSIRTVLTF 373
>pdb|1Y9A|A Chain A, Alcohol Dehydrogenase From Entamoeba Histolotica In
Complex With Cacodylate
pdb|1Y9A|C Chain C, Alcohol Dehydrogenase From Entamoeba Histolotica In
Complex With Cacodylate
Length = 360
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 145/356 (40%), Gaps = 52/356 (14%)
Query: 20 LLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVI 79
+LGI + +P GP D VR AL C SD H T+ + M++
Sbjct: 6 MLGIGRIGWIEKKIPECGPLDALVRPLALAPCTSDTH--------TVWAGAIGDRHDMIL 57
Query: 80 GHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTN-- 137
GHE G I +VGS VK L+VGD+V + P I+ Y + G +N
Sbjct: 58 GHEAVGQIVKVGSLVKRLKVGDKVIV-PAITPDWGEEESQRGYPMHSGGMLGGWKFSNFK 116
Query: 138 GSLAHKVVH----PAKLCYKLPDNVSLEEGAMCEPL-SVGVHACRRANVGPETNVMIMGS 192
+ +V H A L LP ++ E+ M + + G H AN+ V ++G
Sbjct: 117 DGVFSEVFHVNEADANLAL-LPRDIKPEDAVMLSDMVTTGFHGAELANIKLGDTVCVIGI 175
Query: 193 GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNA 252
GP+GL+++ A GA RI IA GA T ++ D+ + K +
Sbjct: 176 GPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGA--TDIINYKNGDIVEQILKATD- 232
Query: 253 MGSGIDVSFDCVGFDKTMSTALNATRPG---GKVCLIG------LAKTEMTV-------- 295
G G+D G T + A+ +PG G V +G + ++E V
Sbjct: 233 -GKGVDKVVIAGGXVHTFAQAVKMIKPGSDIGNVNYLGEGDNIDIPRSEWGVGMGHKHIH 291
Query: 296 -ALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAF 350
LTP ++ + + +GK+D LITHRF +K +EDA
Sbjct: 292 GGLTPGGRVRMEKLA------------SLISTGKLDTSKLITHRFEGLEK-VEDAL 334
>pdb|2DPH|A Chain A, Crystal Structure Of Formaldehyde Dismutase
pdb|2DPH|B Chain B, Crystal Structure Of Formaldehyde Dismutase
Length = 398
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 138/313 (44%), Gaps = 54/313 (17%)
Query: 15 NMAAWLLGIKTLKIQPYHLPTLGPQDVKV------RIKALGICGSDVHHFKVKKLSTMRC 68
N + G + L+++ P L + K+ ++ + ICGSD H ++
Sbjct: 3 NKSVVYHGTRDLRVETVPYPKLEHNNRKLEHAVILKVVSTNICGSDQHIYR--------- 53
Query: 69 ANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLC--- 125
FIV K V+GHE G + E GS+V+ +++GD V++ ++CG C CK ++C
Sbjct: 54 GRFIVPKGHVLGHEITGEVVEKGSDVELMDIGDLVSVPFNVACGRCRNCKEARSDVCENN 113
Query: 126 ---PEMRF----FGSPPTNGSLAHKVVHPAK--LCYKLPDNVSLEEG-----AMCEPLSV 171
P+ F +G A V+ P + K D E + + L
Sbjct: 114 LVNPDADLGAFGFDLKGWSGGQAEYVLVPYADYMLLKFGDKEQAMEKIKDLTLISDILPT 173
Query: 172 GVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE 231
G H C A V P ++V I G+GP+G AR GA +I+ D + +RL + + G +
Sbjct: 174 GFHGCVSAGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAGFET 233
Query: 232 -TAKVSTDIED-VDTDVGKIQNAMGSGIDVSFDCVGFD----------KTMSTALNA--- 276
+ S + D +D +GK + +D D VGF+ +T + ALN+
Sbjct: 234 IDLRNSAPLRDQIDQILGKPE------VDCGVDAVGFEAHGLGDEANTETPNGALNSLFD 287
Query: 277 -TRPGGKVCLIGL 288
R GG + + G+
Sbjct: 288 VVRAGGAIGIPGI 300
>pdb|2OUI|A Chain A, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
pdb|2OUI|B Chain B, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
pdb|2OUI|C Chain C, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
pdb|2OUI|D Chain D, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
Length = 360
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 145/356 (40%), Gaps = 52/356 (14%)
Query: 20 LLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVI 79
+LGI + +P GP D VR AL C SD H T+ + M++
Sbjct: 6 MLGIGRIGWIEKKIPECGPLDALVRPLALAPCTSDTH--------TVWAGAIGDRHDMIL 57
Query: 80 GHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTN-- 137
GHE G I +VGS VK L+VGD+V + P I+ Y + G +N
Sbjct: 58 GHEAVGQIVKVGSLVKRLKVGDKVIV-PAITPDWGEEESQRGYPMHSGGMLGGWKFSNFK 116
Query: 138 GSLAHKVVH----PAKLCYKLPDNVSLEEGAMCEPL-SVGVHACRRANVGPETNVMIMGS 192
+ +V H A L LP ++ E+ M + + G H AN+ V ++G
Sbjct: 117 DGVFSEVFHVNEADANLAL-LPRDIKPEDAVMLSDMVTTGFHGAELANIKLGDTVCVIGI 175
Query: 193 GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNA 252
GP+GL+++ A GA RI IA GA T ++ D+ + K +
Sbjct: 176 GPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGA--TDIINYKNGDIVEQILKATD- 232
Query: 253 MGSGIDVSFDCVGFDKTMSTALNATRPG---GKVCLIG------LAKTEMTV-------- 295
G G+D G T + A+ +PG G V +G + ++E V
Sbjct: 233 -GKGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEGDNIPIPRSEWGVGMGHKHIH 291
Query: 296 -ALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAF 350
LTP ++ + + +GK+D LITHRF +K +EDA
Sbjct: 292 GGLTPGGRVRMEKLA------------SLISTGKLDTSKLITHRFEGLEK-VEDAL 334
>pdb|3FPL|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of C. Beijerinckii
Adh By T. Brockii Adh
Length = 351
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 119/278 (42%), Gaps = 33/278 (11%)
Query: 20 LLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVI 79
+LGI L P G D VR A+ C SD+H L +K M++
Sbjct: 6 MLGINKLGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGD--------RKNMIL 57
Query: 80 GHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTN-- 137
GHE G + EVGSEVK + GDRV + P + SL + G +N
Sbjct: 58 GHEAVGEVVEVGSEVKDFKPGDRVIV-PCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFK 116
Query: 138 ----GSLAHKVVHPAKLCYK-LPDNVSLEEGAM-CEPLSVGVHACRRANVGPETNVMIMG 191
G H V+ A + LP ++ LE M + ++ G H A++ V ++G
Sbjct: 117 DGVFGEYFH--VNDADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIELGATVAVLG 174
Query: 192 SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN 251
GP+GL+ + A+ GA RII + A+ GA TDI V+ G I++
Sbjct: 175 IGPVGLMAVAGAKLRGAGRIIAVGSRPVCVDAAKYYGA-------TDI--VNYKDGPIES 225
Query: 252 AM-----GSGIDVSFDCVGFDKTMSTALNATRPGGKVC 284
+ G G+D + G M+TA+ +PGG +
Sbjct: 226 QIMNLTEGKGVDAAIIAGGNADIMATAVKIVKPGGTIA 263
>pdb|2NVB|A Chain A, Contribution Of Pro275 To The Thermostability Of The
Alcohol Dehydrogenases (Adhs)
pdb|2NVB|B Chain B, Contribution Of Pro275 To The Thermostability Of The
Alcohol Dehydrogenases (Adhs)
pdb|2NVB|C Chain C, Contribution Of Pro275 To The Thermostability Of The
Alcohol Dehydrogenases (Adhs)
pdb|2NVB|D Chain D, Contribution Of Pro275 To The Thermostability Of The
Alcohol Dehydrogenases (Adhs)
Length = 352
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 139/357 (38%), Gaps = 82/357 (22%)
Query: 34 PTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE 93
P GP D VR A+ C SD+H T+ + M++GHE G + EVGSE
Sbjct: 20 PAPGPFDAIVRPLAVAPCTSDIH--------TVFEGAIGERHNMILGHEAVGEVVEVGSE 71
Query: 94 VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEM---------------RFFGSPPTNG 138
VK + GDRV + S + G + M FF +
Sbjct: 72 VKDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFHVNDADM 131
Query: 139 SLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACRRANVGPETNVMIMGSGPIGL 197
+LAH LP + LE M + ++ G H A++ V ++G GP+GL
Sbjct: 132 NLAH-----------LPKEIPLEAAVMIPDMMTTGFHGAELADIELGATVAVLGIGPVGL 180
Query: 198 VTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM---- 253
+ + A+ GA RII + A+ GA TDI V+ G I++ +
Sbjct: 181 MAVAGAKLRGAGRIIAVGSRPVCVDAAKYYGA-------TDI--VNYKDGPIESQIMNLT 231
Query: 254 -GSGIDVSFDCVGFDKTMSTALNATRPGGKVCLI------------------GLAKTEMT 294
G G+D + G M+TA+ +PGG + + G+A +
Sbjct: 232 EGKGVDAAIIAGGNADIMATAVKIVKPGGTIANVNYFGEGEVLDVPRLEWGCGMAHKTIK 291
Query: 295 VALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRF-GFTQKEIEDAF 350
L P R R + + F + ++D L+TH F GF IE AF
Sbjct: 292 GGLCPGG----------RLRMERLIDLVFYK--RVDPSKLVTHVFRGFDN--IEKAF 334
>pdb|1YKF|A Chain A, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium
Brockii
pdb|1YKF|B Chain B, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium
Brockii
pdb|1YKF|C Chain C, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium
Brockii
pdb|1YKF|D Chain D, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium
Brockii
pdb|1BXZ|A Chain A, Crystal Structure Of A Thermophilic Alcohol Dehydrogenase
Substrate Complex From Thermoanaerobacter Brockii
pdb|1BXZ|B Chain B, Crystal Structure Of A Thermophilic Alcohol Dehydrogenase
Substrate Complex From Thermoanaerobacter Brockii
pdb|1BXZ|C Chain C, Crystal Structure Of A Thermophilic Alcohol Dehydrogenase
Substrate Complex From Thermoanaerobacter Brockii
pdb|1BXZ|D Chain D, Crystal Structure Of A Thermophilic Alcohol Dehydrogenase
Substrate Complex From Thermoanaerobacter Brockii
Length = 352
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 139/357 (38%), Gaps = 82/357 (22%)
Query: 34 PTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE 93
P GP D VR A+ C SD+H T+ + M++GHE G + EVGSE
Sbjct: 20 PAPGPFDAIVRPLAVAPCTSDIH--------TVFEGAIGERHNMILGHEAVGEVVEVGSE 71
Query: 94 VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEM---------------RFFGSPPTNG 138
VK + GDRV + S + G + M FF +
Sbjct: 72 VKDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFHVNDADM 131
Query: 139 SLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACRRANVGPETNVMIMGSGPIGL 197
+LAH LP + LE M + ++ G H A++ V ++G GP+GL
Sbjct: 132 NLAH-----------LPKEIPLEAAVMIPDMMTTGFHGAELADIELGATVAVLGIGPVGL 180
Query: 198 VTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM---- 253
+ + A+ GA RII + A+ GA TDI V+ G I++ +
Sbjct: 181 MAVAGAKLRGAGRIIAVGSRPVCVDAAKYYGA-------TDI--VNYKDGPIESQIMNLT 231
Query: 254 -GSGIDVSFDCVGFDKTMSTALNATRPGGKVCLI------------------GLAKTEMT 294
G G+D + G M+TA+ +PGG + + G+A +
Sbjct: 232 EGKGVDAAIIAGGNADIMATAVKIVKPGGTIANVNYFGEGEVLPVPRLEWGCGMAHKTIK 291
Query: 295 VALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRF-GFTQKEIEDAF 350
L P R R + + F + ++D L+TH F GF IE AF
Sbjct: 292 GGLCPGG----------RLRMERLIDLVFYK--RVDPSKLVTHVFRGFDN--IEKAF 334
>pdb|1KOL|A Chain A, Crystal Structure Of Formaldehyde Dehydrogenase
pdb|1KOL|B Chain B, Crystal Structure Of Formaldehyde Dehydrogenase
Length = 398
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 145/328 (44%), Gaps = 57/328 (17%)
Query: 15 NMAAWLLGIKTLKIQPYHLPTL-GPQDVKV------RIKALGICGSDVHHFKVKKLSTMR 67
N LG +++Q P + P+ K+ ++ + ICGSD H V+ +T +
Sbjct: 3 NRGVVYLGSGKVEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQH--MVRGRTTAQ 60
Query: 68 CANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 127
+V+GHE G + E G +V++L++GD V++ ++CG C CK +C
Sbjct: 61 VG-------LVLGHEITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLT 113
Query: 128 MR---------FFGSPPTNGSLAHKVVHPAK--LCYKLPDNVSLEEG-----AMCEPLSV 171
+ + G A V+ P KLPD E + + L
Sbjct: 114 VNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRDKAMEKIRDLTCLSDILPT 173
Query: 172 GVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE 231
G H A VGP + V + G+GP+GL +AR GA +I+ D++ RL+ A+ G E
Sbjct: 174 GYHGAVTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGF-E 232
Query: 232 TAKVSTDI---EDVDTDVGKIQNAMGSGIDVSFDCVGFD-----------KTMSTALNA- 276
A +S D E + +G+ + +D + D VGF+ + +T LN+
Sbjct: 233 IADLSLDTPLHEQIAALLGEPE------VDCAVDAVGFEARGHGHEGAKHEAPATVLNSL 286
Query: 277 ---TRPGGKVCLIGLAKTEMTVALTPAA 301
TR GK+ + GL TE A+ AA
Sbjct: 287 MQVTRVAGKIGIPGLYVTEDPGAVDAAA 314
>pdb|1YQD|A Chain A, Sinapyl Alcohol Dehydrogenase Complexed With Nadp+
pdb|1YQD|B Chain B, Sinapyl Alcohol Dehydrogenase Complexed With Nadp+
pdb|1YQX|A Chain A, Sinapyl Alcohol Dehydrogenase At 2.5 Angstrom Resolution
pdb|1YQX|B Chain B, Sinapyl Alcohol Dehydrogenase At 2.5 Angstrom Resolution
Length = 366
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 137/299 (45%), Gaps = 29/299 (9%)
Query: 19 WLLGIKTLKIQPYHLP--TLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKP 76
W ++ + P++ G +DV+ ++ G+C SD+H K +M P
Sbjct: 20 WAARDQSGHLSPFNFSRRATGEEDVRFKVLYCGVCHSDLHSIKNDWGFSMY--------P 71
Query: 77 MVIGHECAGIIEEVGSEVKSLEVGDRVALEPGI-SCGHCSLCKAGSYNLCPEM------R 129
+V GHE G + EVGS+VK + VGD+V + + +C C C N CP+M
Sbjct: 72 LVPGHEIVGEVTEVGSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYCPKMILTYASI 131
Query: 130 FFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGA--MCEPLSVGVHACRRANVGPETNV 187
+ T G ++ +V + + PDN+ L+ GA +C ++V P ++
Sbjct: 132 YHDGTITYGGYSNHMVANERYIIRFPDNMPLDGGAPLLCAGITVYSPLKYFGLDEPGKHI 191
Query: 188 MIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVG 247
I+G G +G V + A+AFG+ +I+ ++ +N GAD + VS D E
Sbjct: 192 GIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGAD-SFLVSRDQE------- 243
Query: 248 KIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTV-ALTPAAAREV 305
++Q A G+ +D D V + + GK+ L+G + + + A + A R++
Sbjct: 244 QMQAAAGT-LDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAPEKPLELPAFSLIAGRKI 301
>pdb|2H6E|A Chain A, Crystal Structure Of The D-Arabinose Dehydrogenase From
Sulfolobus Solfataricus
Length = 344
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 139/317 (43%), Gaps = 23/317 (7%)
Query: 26 LKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFK-VKKLSTMRCANFIVKKPMVIGHECA 84
L I+ ++P ++V +RI G+C +D+ +K V+ R P+++GHE A
Sbjct: 16 LSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRL-------PIILGHENA 68
Query: 85 GIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKV 144
G I EVG E+ ++ GD V + C C+ G +N+C G G + +
Sbjct: 69 GTIVEVG-ELAKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQTTNGGFSEYML 127
Query: 145 VHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRA----NVGPETNVMIMGSGPIGLVTL 200
V ++ KL +E + + + + A R+A + E V++ G G + + T+
Sbjct: 128 VKSSRWLVKLNSLSPVEAAPLADAGTTSMGAIRQALPFISKFAEPVVIVNGIGGLAVYTI 187
Query: 201 LAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS 260
+A IT V + R R+ + A ++++D ++ + K+ + +G+ I +
Sbjct: 188 QILKALMKN---ITIVGISRSKKHRDFALELGADYVSEMKDAESLINKLTDGLGASI--A 242
Query: 261 FDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPL- 319
D VG ++T G + L+G+ +++ A ++G Y S L
Sbjct: 243 IDLVGTEETTYNLGKLLAQEGAIILVGMEGKRVSLEAFDTAVWNKKLLG-SNYGSLNDLE 301
Query: 320 -CIEFLRSGKIDVKPLI 335
+ SGKI KP I
Sbjct: 302 DVVRLSESGKI--KPYI 316
>pdb|1JQB|A Chain A, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
pdb|1JQB|B Chain B, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
pdb|1JQB|C Chain C, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
pdb|1JQB|D Chain D, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
Length = 351
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 120/276 (43%), Gaps = 25/276 (9%)
Query: 20 LLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVI 79
+LGI L P G D VR A+ C SD+H L +K M++
Sbjct: 6 MLGINKLGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGD--------RKNMIL 57
Query: 80 GHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTN-- 137
GHE G + EVGSEVK + GDRV + P + SL + G +N
Sbjct: 58 GHEAVGEVVEVGSEVKDFKPGDRVIV-PCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFK 116
Query: 138 ----GSLAHKVVHPAKLCYK-LPDNVSLEEGAM-CEPLSVGVHACRRANVGPETNVMIMG 191
G H V+ A + LP ++ LE M + ++ G H A++ ++V+++G
Sbjct: 117 DGVFGEYFH--VNDADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIEMGSSVVVIG 174
Query: 192 SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVST-DIEDVDTDVGKIQ 250
G +GL+ + A+ GA RII + A+ GA + IED V K+
Sbjct: 175 IGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNGHIED---QVMKLT 231
Query: 251 NAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLI 286
N G G+D G +T+S A+ +PGG + I
Sbjct: 232 N--GKGVDRVIMAGGGSETLSQAVKMVKPGGIISNI 265
>pdb|1PED|A Chain A, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1PED|B Chain B, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1PED|C Chain C, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1PED|D Chain D, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1KEV|A Chain A, Structure Of Nadp-Dependent Alcohol Dehydrogenase
pdb|1KEV|B Chain B, Structure Of Nadp-Dependent Alcohol Dehydrogenase
pdb|1KEV|C Chain C, Structure Of Nadp-Dependent Alcohol Dehydrogenase
pdb|1KEV|D Chain D, Structure Of Nadp-Dependent Alcohol Dehydrogenase
Length = 351
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 119/275 (43%), Gaps = 23/275 (8%)
Query: 20 LLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVI 79
+LGI L P G D VR A+ C SD+H L +K M++
Sbjct: 6 MLGINKLGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGD--------RKNMIL 57
Query: 80 GHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTN-- 137
GHE G + EVGSEVK + GDRV + P + SL + G +N
Sbjct: 58 GHEAVGEVVEVGSEVKDFKPGDRVIV-PCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFK 116
Query: 138 ----GSLAHKVVHPAKLCYK-LPDNVSLEEGAM-CEPLSVGVHACRRANVGPETNVMIMG 191
G H V+ A + LP ++ LE M + ++ G H A++ ++V+++G
Sbjct: 117 DGVFGEYFH--VNDADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIQMGSSVVVIG 174
Query: 192 SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN 251
G +GL+ + A+ GA RII + A+ GA + + V K+ N
Sbjct: 175 IGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNG--HIVDQVMKLTN 232
Query: 252 AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLI 286
G G+D G +T+S A++ +PGG + I
Sbjct: 233 --GKGVDRVIMAGGGSETLSQAVSMVKPGGIISNI 265
>pdb|3FSR|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
pdb|3FSR|B Chain B, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
pdb|3FSR|C Chain C, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
pdb|3FSR|D Chain D, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
Length = 352
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 138/352 (39%), Gaps = 72/352 (20%)
Query: 34 PTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE 93
P GP D VR A+ C SD+H T+ + M++GHE G + EVGSE
Sbjct: 20 PAPGPFDAIVRPLAVAPCTSDIH--------TVFEGAIGERHNMILGHEAVGEVVEVGSE 71
Query: 94 VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEM---------------RFFGSPPTNG 138
VK + GDRV + S + G + M FF +
Sbjct: 72 VKDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFHVNDADM 131
Query: 139 SLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACRRANVGPETNVMIMGSGPIGL 197
+LAH LP + LE M + ++ G H A++ ++V+++G G +GL
Sbjct: 132 NLAH-----------LPKEIPLEAAVMIPDMMTTGFHGAELADIQMGSSVVVIGIGAVGL 180
Query: 198 VTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGI 257
+ + A+ GA RII + A+ GA + + V K+ N G G+
Sbjct: 181 MGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNG--HIVDQVMKLTN--GKGV 236
Query: 258 DVSFDCVGFDKTMSTALNATRPGGKVCLI------------------GLAKTEMTVALTP 299
D G +T+S A++ +PGG + I G+A + L P
Sbjct: 237 DRVIMAGGGSETLSQAVSMVKPGGIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLCP 296
Query: 300 AAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRF-GFTQKEIEDAF 350
R R + + F + ++D L+TH F GF IE AF
Sbjct: 297 GG----------RLRMERLIDLVFYK--RVDPSKLVTHVFRGFDN--IEKAF 334
>pdb|3FTN|A Chain A, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
pdb|3FTN|B Chain B, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
pdb|3FTN|C Chain C, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
pdb|3FTN|D Chain D, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
Length = 352
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 137/352 (38%), Gaps = 72/352 (20%)
Query: 34 PTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE 93
P GP D VR A+ C SD+H T+ + M++GHE G + EVGSE
Sbjct: 20 PAPGPFDAIVRPLAVAPCTSDIH--------TVFEGAIGERHNMILGHEAVGEVVEVGSE 71
Query: 94 VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEM---------------RFFGSPPTNG 138
VK + GDRV + S + G + M FF +
Sbjct: 72 VKDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFHVNDADM 131
Query: 139 SLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACRRANVGPETNVMIMGSGPIGL 197
+LAH LP + LE M + ++ G H A++ ++V+++G G +GL
Sbjct: 132 NLAH-----------LPKEIPLEAAVMIPDMMTTGFHGAELADIEMGSSVVVIGIGAVGL 180
Query: 198 VTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGI 257
+ + A+ GA RII + A+ GA + + V K+ N G G+
Sbjct: 181 MGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNG--HIVDQVMKLTN--GKGV 236
Query: 258 DVSFDCVGFDKTMSTALNATRPGGKVCLI------------------GLAKTEMTVALTP 299
D G +T+S A+ +PGG + I G+A + L P
Sbjct: 237 DRVIMAGGGSETLSQAVKMVKPGGIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLCP 296
Query: 300 AAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRF-GFTQKEIEDAF 350
R R + + F + ++D L+TH F GF IE AF
Sbjct: 297 GG----------RLRMERLIDLVFYK--RVDPSKLVTHVFRGFDN--IEKAF 334
>pdb|2B83|A Chain A, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
pdb|2B83|B Chain B, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
pdb|2B83|C Chain C, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
pdb|2B83|D Chain D, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
Length = 351
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 120/283 (42%), Gaps = 39/283 (13%)
Query: 20 LLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVI 79
+LGI L P G D VR A+ C SD+H L +K M++
Sbjct: 6 MLGINKLGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGD--------RKNMIL 57
Query: 80 GHECAGIIEEVGSEVKSLEVGDRV----------ALE-----PGISCGHCSLCKAGSYNL 124
GHE G + EVGSEVK + GDRV +LE P S G + K ++
Sbjct: 58 GHEAVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFPQHSNGMLAGWKFSNFKD 117
Query: 125 CPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAM-CEPLSVGVHACRRANVGP 183
+F + +LA LP ++ LE M + ++ G H A++
Sbjct: 118 GVFGEYFHVNDADMNLA-----------ILPKDMPLENAVMITDMMTTGFHGAELADIQM 166
Query: 184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVD 243
++V+++G G +GL+ + A+ GA RII + A+ GA + +
Sbjct: 167 GSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNG--HIV 224
Query: 244 TDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLI 286
V K+ N G G+D G +T+S A++ +PGG + I
Sbjct: 225 DQVMKLTN--GKGVDRVIMAGGGSETLSQAVSMVKPGGIISNI 265
>pdb|3FPC|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By
E. Histolytica Adh
pdb|3FPC|B Chain B, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By
E. Histolytica Adh
pdb|3FPC|C Chain C, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By
E. Histolytica Adh
pdb|3FPC|D Chain D, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By
E. Histolytica Adh
Length = 352
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 133/343 (38%), Gaps = 54/343 (15%)
Query: 34 PTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE 93
P GP D VR A+ C SD+H T+ + M++GHE G + EVGSE
Sbjct: 20 PAPGPFDAIVRPLAVAPCTSDIH--------TVFEGAIGERHNMILGHEAVGEVVEVGSE 71
Query: 94 VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEM---------------RFFGSPPTNG 138
VK + GDRV + S + G + M FF +
Sbjct: 72 VKDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFHVNDADM 131
Query: 139 SLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACRRANVGPETNVMIMGSGPIGL 197
+LAH LP + LE M + ++ G H AN+ V ++G GP+GL
Sbjct: 132 NLAH-----------LPKEIPLEAAVMIPDMMTTGFHGAELANIKLGDTVCVIGIGPVGL 180
Query: 198 VTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGI 257
+++ A GA RI IA GA T ++ D+ + K + G G+
Sbjct: 181 MSVAGANHLGAGRIFAVGSRKHCCDIALEYGA--TDIINYKNGDIVEQILKATD--GKGV 236
Query: 258 DVSFDCVGFDKTMSTALNATRPG---GKVCLIG------LAKTEMTVALTPAAAREVDVI 308
D G T + A+ +PG G V +G + ++E V +
Sbjct: 237 DKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEGDNIDIPRSEWGVGMGHKHIHGGLCP 296
Query: 309 GIFRYRSTWPLCIEFLRSGKIDVKPLITHRF-GFTQKEIEDAF 350
G R I+ + ++D L+TH F GF IE AF
Sbjct: 297 G---GRLRMERLIDLVFYKRVDPSKLVTHVFRGFDN--IEKAF 334
>pdb|3JYL|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato
Dc3000 Quinone Oxidoreductase
pdb|3JYN|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato
Dc3000 Quinone Oxidoreductase Complexed With Nadph
Length = 325
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/256 (31%), Positives = 117/256 (45%), Gaps = 44/256 (17%)
Query: 37 GPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKS 96
GPQ V VR KA+G+ D ++ S + A F+ P +G E AG++E VG EV
Sbjct: 27 GPQAVVVRNKAIGLNFIDTYY-----RSGLYPAPFL---PSGLGAEGAGVVEAVGDEVTR 78
Query: 97 LEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPD 156
+VGDRVA +G+ P G+ + V P KL D
Sbjct: 79 FKVGDRVA--------------------------YGTGPL-GAYSEVHVLPEANLVKLAD 111
Query: 157 NVSLEEGA--MCEPLSVGVHACRRANVGP-ETNVMIMGSGPIGLVTLLAARAFGAPRIII 213
+VS E+ A M + L+V + V P E + +G +G + A+A GA ++I
Sbjct: 112 SVSFEQAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGA-KLIG 170
Query: 214 TDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTA 273
T ++ + A+ LGA ET S EDV V ++ + G V +D VG D T T+
Sbjct: 171 TVSSPEKAAHAKALGAWETIDYSH--EDVAKRVLELTD--GKKCPVVYDGVGQD-TWLTS 225
Query: 274 LNATRPGGKVCLIGLA 289
L++ P G V G A
Sbjct: 226 LDSVAPRGLVVSFGNA 241
>pdb|1WLY|A Chain A, Crystal Structure Of 2-haloacrylate Reductase
Length = 333
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 114/258 (44%), Gaps = 43/258 (16%)
Query: 37 GPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKS 96
GP V++R A+G+ D +H + + + + P+V+G E A ++EEVG V
Sbjct: 27 GPGQVRLRNTAIGVNFLDTYH-----RAGIPHPLVVGEPPIVVGFEAAAVVEEVGPGVTD 81
Query: 97 LEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPD 156
VG+RV C+ P G+ + + ++PA+ K+P
Sbjct: 82 FTVGERV----------CTCL-----------------PPLGAYSQERLYPAEKLIKVPK 114
Query: 157 NVSLEE----GAMCEPLSVGVHACRRANVGPETNVMI-MGSGPIGLVTLLAARAFGAPRI 211
++ L++ G M + ++ + V P V+I +G +G + + AR GA +
Sbjct: 115 DLDLDDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGA-TV 173
Query: 212 IITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMS 271
I T ++ AR LG T ST +D V +I G G+DV +D +G D T+
Sbjct: 174 IGTVSTEEKAETARKLGCHHTINYST--QDFAEVVREITG--GKGVDVVYDSIGKD-TLQ 228
Query: 272 TALNATRPGGKVCLIGLA 289
+L+ RP G G A
Sbjct: 229 KSLDCLRPRGMCAAYGHA 246
>pdb|3TWO|A Chain A, The Crystal Structure Of Cad From Helicobacter Pylori
Complexed With Nadp(H)
pdb|3TWO|B Chain B, The Crystal Structure Of Cad From Helicobacter Pylori
Complexed With Nadp(H)
Length = 348
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 118/277 (42%), Gaps = 41/277 (14%)
Query: 36 LGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVK 95
+GP+DV + I GIC SD+H S + + PM+ GHE AGII+EVG VK
Sbjct: 27 VGPRDVLIDILYAGICHSDIH----SAYSEWKEGIY----PMIPGHEIAGIIKEVGKGVK 78
Query: 96 SLEVGDRVALEPGI-SCGHCSLCKAGSYNLCPEM--------RFFGSPPTNGSLAHKVVH 146
++GD V + + SC C CK C ++ F + P G ++ +V
Sbjct: 79 KFKIGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTYDCLDSFHDNEPHMGGYSNNIVV 138
Query: 147 PAKLCYKLPDNVSLEEGA--MCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAAR 204
+ N LE+ A +C ++ + + V T V + G G +G + + A
Sbjct: 139 DENYVISVDKNAPLEKVAPLLCAGITT-YSPLKFSKVTKGTKVGVAGFGGLGSMAVKYAV 197
Query: 205 AFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMG---SGIDVSF 261
A GA +V V ARN + A +S ++ TD + + + S I +
Sbjct: 198 AMGA------EVSV----FARNEHKKQDA-LSMGVKHFYTDPKQCKEELDFIISTIPTHY 246
Query: 262 DCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALT 298
D + K ++ G + L+GL E+ L+
Sbjct: 247 DLKDYLKLLTY-------NGDLALVGLPPVEVAPVLS 276
>pdb|1UUF|A Chain A, Crystal Structure Of A Zinc-Type Alcohol
Dehydrogenase-Like Protein Yahk
Length = 369
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 87/208 (41%), Gaps = 25/208 (12%)
Query: 37 GPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKS 96
GP DVK+ I G+C SD+H + + T+ P V GHE G + VG +V+
Sbjct: 46 GPNDVKIEIAYCGVCHSDLHQVRSEWAGTVY--------PCVPGHEIVGRVVAVGDQVEK 97
Query: 97 LEVGDRVALEPGI-SCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHK--------VVHP 147
GD V + + SC HC C+ G N C M + PT H VVH
Sbjct: 98 YAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHE 157
Query: 148 AKLCYKLPDNVSLEEGAMCEPLSVG----VHACRRANVGPETNVMIMGSGPIGLVTLLAA 203
Y L E+ A PL R GP V ++G G +G + + A
Sbjct: 158 R---YVLRIRHPQEQLAAVAPLLCAGITTYSPLRHWQAGPGKKVGVVGIGGLGHMGIKLA 214
Query: 204 RAFGAPRIIITDVDVQRLSIARNLGADE 231
A GA + T + +R A+ LGADE
Sbjct: 215 HAMGAHVVAFTTSEAKR-EAAKALGADE 241
>pdb|2HCY|A Chain A, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|B Chain B, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|C Chain C, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|D Chain D, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
Length = 347
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 113/268 (42%), Gaps = 20/268 (7%)
Query: 27 KIQPYHLPTLGPQ--DVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECA 84
K++ +P P+ ++ + +K G+C +D+H + VK P+V GHE A
Sbjct: 17 KLEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGD-------WPLPVKLPLVGGHEGA 69
Query: 85 GIIEEVGSEVKSLEVGDRVALEP-GISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHK 143
G++ +G VK ++GD ++ SC C C+ G+ + CP G +GS
Sbjct: 70 GVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSGY-THDGSFQQY 128
Query: 144 VVHPAKLCYKLPDNVSLEEGA--MCEPLSVGVHACRRANVGPETNVMIMG-SGPIGLVTL 200
A +P L + A +C ++V A + AN+ V I G +G +G + +
Sbjct: 129 ATADAVQAAHIPQGTDLAQVAPILCAGITV-YKALKSANLMAGHWVAISGAAGGLGSLAV 187
Query: 201 LAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS 260
A+A G R++ D + + R++G + V D VG + A G
Sbjct: 188 QYAKAMGY-RVLGIDGGEGKEELFRSIGGE----VFIDFTKEKDIVGAVLKATDGGAHGV 242
Query: 261 FDCVGFDKTMSTALNATRPGGKVCLIGL 288
+ + + + R G L+G+
Sbjct: 243 INVSVSEAAIEASTRYVRANGTTVLVGM 270
>pdb|4A27|A Chain A, Crystal Structure Of Human Synaptic Vesicle Membrane
Protein Vat-1 Homolog-Like Protein
pdb|4A27|B Chain B, Crystal Structure Of Human Synaptic Vesicle Membrane
Protein Vat-1 Homolog-Like Protein
Length = 349
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 109/271 (40%), Gaps = 51/271 (18%)
Query: 22 GIKTLKIQPYHLPTLGPQD--VKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVI 79
G+ L++ +P PQD +K+R+KA CG + V++ + K P+V
Sbjct: 14 GLNKLRLFRKAMPE--PQDGELKIRVKA---CGLNFIDLMVRQGNIDNPP----KTPLVP 64
Query: 80 GHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGS 139
G EC+GI+E +G VK E+GDRV M F +
Sbjct: 65 GFECSGIVEALGDSVKGYEIGDRV------------------------MAFV----NYNA 96
Query: 140 LAHKVVHPAKLCYKLPDNVSLEEGAM--CEPLSVGVHACRRANVGPETNVMIMGSGPIGL 197
A V P + YK+PD++S E A ++ V AN+ +V++ +G G+
Sbjct: 97 WAEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGG-GV 155
Query: 198 VTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTD-VGKIQNAMGSG 256
+A P + + A + T + D + D V +++ G
Sbjct: 156 GQAVAQLCSTVPNVTV-------FGTASTFKHEAIKDSVTHLFDRNADYVQEVKRISAEG 208
Query: 257 IDVSFDCVGFDKTMSTALNATRPGGKVCLIG 287
+D+ DC+ D T L+ +P G L G
Sbjct: 209 VDIVLDCLCGDNT-GKGLSLLKPLGTYILYG 238
>pdb|1PS0|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Cinnamyl
Alcohol Dehydrogenase From Saccharomyces Cerevisiae
pdb|1Q1N|A Chain A, Apo And Holo Structures Of An Nadp(h)-dependent Cinnamyl
Alcohol Dehydrogenase From Saccharomyces Cerevisiae
pdb|1PIW|A Chain A, Apo And Holo Structures Of An Nadp(H)-Dependent Cinnamyl
Alcohol Dehydrogenase From Saccharomyces Cerevisiae
pdb|1PIW|B Chain B, Apo And Holo Structures Of An Nadp(H)-Dependent Cinnamyl
Alcohol Dehydrogenase From Saccharomyces Cerevisiae
Length = 360
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 132/315 (41%), Gaps = 42/315 (13%)
Query: 9 EGDKNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRC 68
EG Q+ W K K Y D+ ++I+A G+CGSD+H +
Sbjct: 8 EGIAIQSHEDW----KNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIH------CAAGHW 57
Query: 69 ANFIVKKPMVIGHECAGIIEEVGSEVKS-LEVGDRVALEPGI-SCGHCSLCKAGSYNLCP 126
N +K P+V+GHE G + ++G + S L+VG RV + + SC C CK + C
Sbjct: 58 GN--MKMPLVVGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCT 115
Query: 127 EMRFFGSPP------TNGSLAHKVVHPAKLCYKLPDNVSLEEGA--MCEPLSVGVHACRR 178
+ S P + G A+ V +P+N+ A +C L+V R
Sbjct: 116 KFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIPSHLAAPLLCGGLTV-YSPLVR 174
Query: 179 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTD 238
GP V I+G G IG + L ++A GA +I+ +R A +GAD ++T
Sbjct: 175 NGCGPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKRED-AMKMGADHY--IAT- 230
Query: 239 IEDVDTDVGKIQNAMGSGIDVSFDCVGF------DKTMSTALNATRPGGKVCLIGLAKTE 292
+E+ D G +FD + D + A + GG++ I + +
Sbjct: 231 LEEGD---------WGEKYFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQH 281
Query: 293 MTVALTPAAAREVDV 307
++L P + V +
Sbjct: 282 EMLSLKPYGLKAVSI 296
>pdb|3KRT|A Chain A, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|B Chain B, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|C Chain C, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|D Chain D, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
Length = 456
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 118/294 (40%), Gaps = 41/294 (13%)
Query: 24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTM-------RCANFIVKKP 76
K++ + +P LGP + V + A + + VH + LST R ++ +
Sbjct: 56 KSIHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLERYGRVSDLAKRHD 115
Query: 77 M---VIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYN---LCPEMRF 130
+ VIG + AG++ G V + + GD V C L + +N L PE R
Sbjct: 116 LPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAH----CLSVELESSDGHNDTMLDPEQRI 171
Query: 131 FGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRR------ANVGPE 184
+G G LA + + PD++S EE A P V A R+ A +
Sbjct: 172 WGFETNFGGLAEIALVKSNQLMPKPDHLSWEEAAA--PGLVNSTAYRQLVSRNGAGMKQG 229
Query: 185 TNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA----DETAKVSTDI 239
NV+I G SG +G A A GA I + Q+ I R +GA D A+
Sbjct: 230 DNVLIWGASGGLGSYATQFALAGGANPICVVS-SPQKAEICRAMGAEAIIDRNAEGYRFW 288
Query: 240 EDVDTDVGKIQNAM---------GSGIDVSFDCVGFDKTMSTALNATRPGGKVC 284
+D +T K G ID+ F+ G +T ++ TR GG +
Sbjct: 289 KDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPG-RETFGASVFVTRKGGTIT 341
>pdb|3QWA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
pdb|3QWA|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
pdb|3QWB|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|C Chain C, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|D Chain D, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
Length = 334
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 107/274 (39%), Gaps = 49/274 (17%)
Query: 22 GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGH 81
G +K + Y +P++ +++ ++ K G+ + S R + +KP V+G
Sbjct: 19 GYDVIKYEDYPVPSISEEELLIKNKYTGVNYIE---------SYFRKGIYPCEKPYVLGR 69
Query: 82 ECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLA 141
E +G + G V + EVGD+VA + S + P M
Sbjct: 70 EASGTVVAKGKGVTNFEVGDQVAYISNSTFAQYSKISSQG----PVM------------- 112
Query: 142 HKVVHPAKLCYKLPDNVSLEE-----GAMCEPLSVGVHACRRANVGPETNVMIMGS-GPI 195
KLP S EE + + L+ +V V++ + G +
Sbjct: 113 -----------KLPKGTSDEELKLYAAGLLQVLTALSFTNEAYHVKKGDYVLLFAAAGGV 161
Query: 196 GLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGS 255
GL+ + GA I + D ++L IA+ GA+ S ED+ V K N G
Sbjct: 162 GLILNQLLKMKGAHTIAVASTD-EKLKIAKEYGAEYLINASK--EDILRQVLKFTN--GK 216
Query: 256 GIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLA 289
G+D SFD VG D T +L A + G G A
Sbjct: 217 GVDASFDSVGKD-TFEISLAALKRKGVFVSFGNA 249
>pdb|3UOG|A Chain A, Crystal Structure Of Putative Alcohol Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|3UOG|B Chain B, Crystal Structure Of Putative Alcohol Dehydrogenase From
Sinorhizobium Meliloti 1021
Length = 363
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 132/327 (40%), Gaps = 33/327 (10%)
Query: 26 LKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAG 85
LK+ +P G D+ VR A+ + D KL + P V + +G
Sbjct: 41 LKLAERPVPEAGEHDIIVRTLAVSLNYRD-------KLVLETGXGLDLAFPFVPASDXSG 93
Query: 86 IIEEVGSEVKSLEVGDRV--ALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHK 143
++E VG V GDRV PG G + G+ G+ P G L+
Sbjct: 94 VVEAVGKSVTRFRPGDRVISTFAPGWLDG----LRPGTGRTPAYETLGGAHP--GVLSEY 147
Query: 144 VVHPAKLCYKLPDNVSLEEGAM--CEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLL 201
VV P P ++ E + C L+ + ++ V++ G+G + L L
Sbjct: 148 VVLPEGWFVAAPKSLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQGTGGVALFGLQ 207
Query: 202 AARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTD-VGKIQNAMGS-GIDV 259
A+A GA +I+T ++L A LGAD I ++ D V ++ G G D
Sbjct: 208 IAKATGA-EVIVTSSSREKLDRAFALGADH------GINRLEEDWVERVYALTGDRGADH 260
Query: 260 SFDCVGFDKTMSTALNATRPGGKVCLIG-LAKTEMTVALTPAAARE--VDVIGIFRYRST 316
+ G + +L A P G++ +IG L E++ + P + V I + R+
Sbjct: 261 ILEIAG-GAGLGQSLKAVAPDGRISVIGVLEGFEVSGPVGPLLLKSPVVQGISVGHRRAL 319
Query: 317 WPLCIEFLRSGKIDVKPLITHRFGFTQ 343
L R G +KP+I R+ FT+
Sbjct: 320 EDLVGAVDRLG---LKPVIDXRYKFTE 343
>pdb|3FBG|A Chain A, Crystal Structure Of A Putative Arginate Lyase From
Staphylococcus Haemolyticus
pdb|3FBG|B Chain B, Crystal Structure Of A Putative Arginate Lyase From
Staphylococcus Haemolyticus
Length = 346
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 74/170 (43%), Gaps = 39/170 (22%)
Query: 72 IVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF 131
+ K P V+G + G++E VG+EV GD V +
Sbjct: 56 VSKAPRVLGFDAIGVVESVGNEVTMFNQGDIV-------------------------YYS 90
Query: 132 GSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLS-----------VGVHACRRAN 180
GSP NGS A + +L K P N+S E+ A+ PL+ G+ R N
Sbjct: 91 GSPDQNGSNAEYQLINERLVAKAPKNISAEQ-AVSLPLTGITAYETLFDVFGISRNRNEN 149
Query: 181 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD 230
G +T ++I G+G +G + A+A+G R+I T + + + +GAD
Sbjct: 150 EG-KTLLIINGAGGVGSIATQIAKAYGL-RVITTASRNETIEWTKKMGAD 197
>pdb|2CF5|A Chain A, Crystal Structures Of The Arabidopsis Cinnamyl Alcohol
Dehydrogenases, Atcad5
pdb|2CF6|A Chain A, Crystal Structures Of The Arabidopsis Cinnamyl Alcohol
Dehydrogenases Atcad5
Length = 357
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 123/278 (44%), Gaps = 27/278 (9%)
Query: 31 YHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEV 90
Y L GP+DV +RI GIC +D+H K + + +N+ PMV GHE G + EV
Sbjct: 27 YTLRETGPEDVNIRIICCGICHTDLHQTK----NDLGMSNY----PMVPGHEVVGEVVEV 78
Query: 91 GSEVKSLEVGD-RVALEPGISCGHCSLCKAGSYNLCPEM------RFFGSPPTNGSLAHK 143
GS+V VGD CG CS C+ CP+ + PT G A
Sbjct: 79 GSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVYINGQPTQGGFAKA 138
Query: 144 VVHPAKLCYKLPDNVSLEEGA--MCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLL 201
V K K+P+ +++E+ A +C ++V P I+G G +G + +
Sbjct: 139 TVVHQKFVVKIPEGMAVEQAAPLLCAGVTVYSPLSHFGLKQPGLRGGILGLGGVGHMGVK 198
Query: 202 AARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF 261
A+A G +I+ + +R ++LGAD+ + +D K+ + + +D
Sbjct: 199 IAKAMGHHVTVISSSNKKREEALQDLGADDYV--------IGSDQAKM-SELADSLDYVI 249
Query: 262 DCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTP 299
D V + L+ + GK+ L+G+ + LTP
Sbjct: 250 DTVPVHHALEPYLSLLKLDGKLILMGVINNPLQF-LTP 286
>pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
pdb|1YB5|B Chain B, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
Length = 351
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 120/288 (41%), Gaps = 54/288 (18%)
Query: 38 PQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVI---GHECAGIIEEVGSEV 94
P+D +V IK VH V + T + +KP++ G + AG+IE VG
Sbjct: 55 PKDHQVLIK--------VHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNA 106
Query: 95 KSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKL 154
+ + GDRV IS G+ A + + YKL
Sbjct: 107 SAFKKGDRVFTSSTISGGYAEYALAADHTV---------------------------YKL 139
Query: 155 PDNVSLEEGAMCE-PLSVGVHAC-RRANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRI 211
P+ + ++GA P A A V +V++ G SG +GL ARA+G +I
Sbjct: 140 PEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGL-KI 198
Query: 212 IITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGS-GIDVSFDCVGFDKTM 270
+ T + I GA E ++ +D KI+ +G GID+ + + + +
Sbjct: 199 LGTAGTEEGQKIVLQNGAHEVFN-HREVNYID----KIKKYVGEKGIDIIIEMLA-NVNL 252
Query: 271 STALNATRPGGKVCLIGLAKTEMTVALTP--AAAREVDVIGIFRYRST 316
S L+ GG+V ++G + T+ + P A+E +IG+ + ST
Sbjct: 253 SKDLSLLSHGGRVIVVG---SRGTIEINPRDTMAKESSIIGVTLFSST 297
>pdb|2CD9|A Chain A, Sulfolobus Solfataricus Glucose Dehydrogenase 1 - Apo Form
pdb|2CD9|B Chain B, Sulfolobus Solfataricus Glucose Dehydrogenase 1 - Apo Form
pdb|2CDA|A Chain A, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp
pdb|2CDA|B Chain B, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp
Length = 366
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 82/204 (40%), Gaps = 29/204 (14%)
Query: 22 GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVK-KLSTMRCANFIVKKPMVIG 80
G++ + L + G +K+R GICG+D K LST+ K +V+G
Sbjct: 12 GVQVKDVDEKKLDSYGK--IKIRTIYNGICGTDREIVNGKLTLSTLPKG----KDFLVLG 65
Query: 81 HECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRF--FGSPPTNG 138
HE G++EE GD V CG C C G + C F G +G
Sbjct: 66 HEAIGVVEE---SYHGFSQGDLVMPVNRRGCGICRNCLVGRPDFCETGEFGEAGIHKMDG 122
Query: 139 SLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLS---------------VGVHACRRANVGP 183
+ K K+P ++ + G + +PL+ V V C +
Sbjct: 123 FMREWWYDDPKYLVKIPKSIE-DIGILAQPLADIEKSIEEILEVQKRVPVWTCDDGTLNC 181
Query: 184 ETNVMIMGSGPIGLVTLLAARAFG 207
V+++G+GPIG++ L R +G
Sbjct: 182 R-KVLVVGTGPIGVLFTLLFRTYG 204
>pdb|2CDB|A Chain A, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Glucose
pdb|2CDB|B Chain B, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Glucose
pdb|2CDB|C Chain C, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Glucose
pdb|2CDB|D Chain D, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Glucose
pdb|2CDC|A Chain A, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Xylose
pdb|2CDC|B Chain B, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Xylose
pdb|2CDC|C Chain C, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Xylose
pdb|2CDC|D Chain D, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Xylose
Length = 366
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 82/204 (40%), Gaps = 29/204 (14%)
Query: 22 GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVK-KLSTMRCANFIVKKPMVIG 80
G++ + L + G +K+R GICG+D K LST+ K +V+G
Sbjct: 12 GVQVKDVDEKKLDSYGK--IKIRTIYNGICGADREIVNGKLTLSTLPKG----KDFLVLG 65
Query: 81 HECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRF--FGSPPTNG 138
HE G++EE GD V CG C C G + C F G +G
Sbjct: 66 HEAIGVVEE---SYHGFSQGDLVMPVNRRGCGICRNCLVGRPDFCETGEFGEAGIHKMDG 122
Query: 139 SLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLS---------------VGVHACRRANVGP 183
+ K K+P ++ + G + +PL+ V V C +
Sbjct: 123 FMREWWYDDPKYLVKIPKSIE-DIGILAQPLADIEKSIEEILEVQKRVPVWTCDDGTLNC 181
Query: 184 ETNVMIMGSGPIGLVTLLAARAFG 207
V+++G+GPIG++ L R +G
Sbjct: 182 R-KVLVVGTGPIGVLFTLLFRTYG 204
>pdb|3GOH|A Chain A, Crystal Structure Of Alcohol Dehydrogenase Superfamily
Protein (np_718042.1) From Shewanella Oneidensis At 1.55
A Resolution
Length = 315
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 77/187 (41%), Gaps = 34/187 (18%)
Query: 10 GDKNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCA 69
G + + A+ ++ + +P L D+ V+ +A+GI D +K K + + +
Sbjct: 1 GXEQHQVWAYQTKTHSVTLNSVDIPALAADDILVQNQAIGINPVD---WKFIKANPINWS 57
Query: 70 NFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMR 129
N V G + AG+I +VG++V S +G RVA H SL +
Sbjct: 58 N-----GHVPGVDGAGVIVKVGAKVDSKXLGRRVAY-------HTSLKR----------- 94
Query: 130 FFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACRRANVGPETNVM 188
+GS A V LPDN+S E A PL A + + + V+
Sbjct: 95 -------HGSFAEFTVLNTDRVXTLPDNLSFERAAALPCPLLTAWQAFEKIPLTKQREVL 147
Query: 189 IMGSGPI 195
I+G G +
Sbjct: 148 IVGFGAV 154
>pdb|2B5V|A Chain A, Crystal Structure Of Glucose Dehydrogenase From Haloferax
Mediterranei
pdb|2VWG|A Chain A, Haloferax Mediterranei Glucose Dehydrogenase In Complex
With Nadp, Zn And Gluconolactone.
pdb|2VWH|A Chain A, Haloferax Mediterranei Glucose Dehydrogenase In Complex
With Nadp, Zn And Glucose.
pdb|2VWP|A Chain A, Haloferax Mediterranei Glucose Dehydrogenase In Complex
With Nadph And Zn.
pdb|2VWQ|A Chain A, Haloferax Mediterranei Glucose Dehydrogenase In Complex
With Nadp And Zn
Length = 357
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 97/230 (42%), Gaps = 32/230 (13%)
Query: 77 MVIGHECAGIIEEVGSEVKSLEVGDRVALEPGI----SCGHCSLCKAGSYNLCPEMRFF- 131
+V+GHE G++ V LE GD V P + + G + ++ P+ +F
Sbjct: 59 LVLGHEAVGVV--VDPNDTELEEGDIVV--PTVRRPPASGTNEYFERDQPDMAPDGMYFE 114
Query: 132 -GSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVG------VHACRRANVGPE 184
G +G ++ P K ++P + + E G + EP+S+ +A R A
Sbjct: 115 RGIVGAHGYMSEFFTSPEKYLVRIPRSQA-ELGFLIEPISITEKALEHAYASRSAFDWDP 173
Query: 185 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADETAKV-----STD 238
++ ++G+G +GL+TL + + D + L + R D T + +T
Sbjct: 174 SSAFVLGNGSLGLLTLAMLK--------VDDKGYENLYCLGRRDRPDPTIDIIEELDATY 225
Query: 239 IEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGL 288
++ T V + + +D ++ GF K ++ A P G L+G+
Sbjct: 226 VDSRQTPVEDVPDVY-EQMDFIYEATGFPKHAIQSVQALAPNGVGALLGV 274
>pdb|2B5W|A Chain A, Crystal Structure Of D38c Glucose Dehydrogenase Mutant
From Haloferax Mediterranei
Length = 357
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 97/230 (42%), Gaps = 32/230 (13%)
Query: 77 MVIGHECAGIIEEVGSEVKSLEVGDRVALEPGI----SCGHCSLCKAGSYNLCPEMRFF- 131
+V+GHE G++ V LE GD V P + + G + ++ P+ +F
Sbjct: 59 LVLGHEAVGVV--VDPNDTELEEGDIVV--PTVRRPPASGTNEYFERDQPDMAPDGMYFE 114
Query: 132 -GSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVG------VHACRRANVGPE 184
G +G ++ P K ++P + + E G + EP+S+ +A R A
Sbjct: 115 RGIVGAHGYMSEFFTSPEKYLVRIPRSQA-ELGFLIEPISITEKALEHAYASRSAFDWDP 173
Query: 185 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADETAKV-----STD 238
++ ++G+G +GL+TL + + D + L + R D T + +T
Sbjct: 174 SSAFVLGNGSLGLLTLAMLK--------VDDKGYENLYCLGRRDRPDPTIDIIEELDATY 225
Query: 239 IEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGL 288
++ T V + + +D ++ GF K ++ A P G L+G+
Sbjct: 226 VDSRQTPVEDVPDVY-EQMDFIYEATGFPKHAIQSVQALAPNGVGALLGV 274
>pdb|3HZZ|A Chain A, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|B Chain B, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|C Chain C, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|D Chain D, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
Length = 467
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 113/297 (38%), Gaps = 47/297 (15%)
Query: 24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVK-KPM----- 77
K++ + +P LGP + V + A + + V + +ST K P+
Sbjct: 74 KSIHLDEVPVPELGPGEALVAVMASSVNYNSVWTSIFEPVSTFAFLERYGKLSPLTKRHD 133
Query: 78 ----VIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYN------LCPE 127
+IG + AG++ G V + + GD V HC + S + L PE
Sbjct: 134 LPYHIIGSDLAGVVLRTGPGVNAWQPGDEV-------VAHCLSVELESPDGHDDTMLDPE 186
Query: 128 MRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRR------ANV 181
R +G G LA + P +++ EE A P V A R+ A +
Sbjct: 187 QRIWGFETNFGGLAEIALVKTNQLMPKPKHLTWEEAAA--PGLVNSTAYRQLVSRNGAAM 244
Query: 182 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA----DETAKVS 236
NV+I G SG +G A A GA I + Q+ I R++GA D A+
Sbjct: 245 KQGDNVLIWGASGGLGSYATQFALAGGANPICVVS-SPQKAEICRSMGAEAIIDRNAEGY 303
Query: 237 TDIEDVDTDVGKIQNAM---------GSGIDVSFDCVGFDKTMSTALNATRPGGKVC 284
+D T K G ID+ F+ G +T ++ TR GG +
Sbjct: 304 KFWKDEHTQDPKEWKRFGKRIRELTGGEDIDIVFEHPG-RETFGASVYVTRKGGTIT 359
>pdb|4DUP|A Chain A, Crystal Structure Of A Quinone Oxidoreductase From
Rhizobium Etli Cfn 42
pdb|4DUP|B Chain B, Crystal Structure Of A Quinone Oxidoreductase From
Rhizobium Etli Cfn 42
Length = 353
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 130/356 (36%), Gaps = 74/356 (20%)
Query: 33 LPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPM--VIGHECAGIIEEV 90
LP G +V VR +A+G+ D+ R ++ K ++G E +G I V
Sbjct: 50 LPVAGEGEVLVRAEAIGVNRPDIAQ---------RQGSYPPPKDASPILGLELSGEIVGV 100
Query: 91 GSEVKSLEVGDRVALEPGISCGHCSLCKAGSYN---LCPEMRFFGSPPTNGSLAHKVVHP 147
G V VGD+V C L G+Y L P + P G A K
Sbjct: 101 GPGVSGYAVGDKV----------CGLANGGAYAEYCLLPAGQIL--PFPKGYDAVKAAAL 148
Query: 148 AKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFG 207
+ + + N+ + + E SV +H G+ IG + ARAFG
Sbjct: 149 PETFFTVWANL-FQXAGLTEGESVLIHG---------------GTSGIGTTAIQLARAFG 192
Query: 208 APRIIITDVDVQRLSIARNLGADETAKV-STDIEDVDTDVGKIQNAMGSGIDVSFDCVG- 265
A + T + LGA S D V I+ G G+D+ D +G
Sbjct: 193 A-EVYATAGSTGKCEACERLGAKRGINYRSEDFAAV------IKAETGQGVDIILDXIGA 245
Query: 266 --FDKTMST----------ALNATRPGGKVCLIGLAKTEMTVALT---PAAAREVDVIGI 310
F++ +++ A KV L + +TV + P A E I
Sbjct: 246 AYFERNIASLAKDGCLSIIAFLGGAVAEKVNLSPIXVKRLTVTGSTXRPRTAEEKRAIRD 305
Query: 311 FRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 366
WPL L +G V P+I F F +++ DA + +G + KV +
Sbjct: 306 DLLSEVWPL----LEAGT--VAPVIHKVFAF--EDVADAHRLLEEGSHVGKVXLTV 353
>pdb|1QOR|A Chain A, Crystal Structure Of Escherichia Coli Quinone
Oxidoreductase Complexed With Nadph
pdb|1QOR|B Chain B, Crystal Structure Of Escherichia Coli Quinone
Oxidoreductase Complexed With Nadph
Length = 327
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 82/195 (42%), Gaps = 35/195 (17%)
Query: 76 PMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPP 135
P +G E AGI+ +VGS VK ++ GDRV + G+Y
Sbjct: 58 PSGLGTEAAGIVSKVGSGVKHIKAGDRVVY---------AQSALGAY------------- 95
Query: 136 TNGSLAHKVVHPAKLCYKLPDNVSLEEGA--MCEPLSVGVHACRRANVGPETNVMI-MGS 192
S H ++ A LP +S E+ A + L+V + + P+ + +
Sbjct: 96 ---SSVHNII--ADKAAILPAAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAA 150
Query: 193 GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNA 252
G +GL+ A+A GA ++I T Q+ A GA + ++ ED+ + +I
Sbjct: 151 GGVGLIACQWAKALGA-KLIGTVGTAQKAQSALKAGAWQV--INYREEDLVERLKEITG- 206
Query: 253 MGSGIDVSFDCVGFD 267
G + V +D VG D
Sbjct: 207 -GKKVRVVYDSVGRD 220
>pdb|3GQV|A Chain A, Lovastatin Polyketide Enoyl Reductase (Lovc) Mutant K54s
With Bound Nadp
Length = 371
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 56/132 (42%), Gaps = 33/132 (25%)
Query: 34 PTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE 93
P L V VR++A+ I SD ++MR F +G + AG + VGS+
Sbjct: 32 PMLPRDQVYVRVEAVAINPSD---------TSMR-GQFATPW-AFLGTDYAGTVVAVGSD 80
Query: 94 VKSLEVGDRVALEPGISCGHCSLCKAGSYN-LCPEMRFFGSPPTNGSLAHKVVHPAKLCY 152
V ++VGDRV G+ N +CP P G+ + V ++
Sbjct: 81 VTHIQVGDRV---------------YGAQNEMCPRT------PDQGAFSQYTVTRGRVWA 119
Query: 153 KLPDNVSLEEGA 164
K+P +S E+ A
Sbjct: 120 KIPKGLSFEQAA 131
>pdb|4A0S|A Chain A, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A0S|B Chain B, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A0S|C Chain C, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A0S|D Chain D, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A10|A Chain A, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp.
pdb|4A10|B Chain B, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp.
pdb|4A10|C Chain C, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp.
pdb|4A10|D Chain D, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp
Length = 447
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 92/225 (40%), Gaps = 23/225 (10%)
Query: 24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVH----------HFKVKKLSTMRCANFIV 73
K+L++ +P L P +V V + A I + V HF + A
Sbjct: 48 KSLRLGEVPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNARQGGWATRHD 107
Query: 74 KKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGS 133
+ V+G +C+G++ G V+ + GD V + P G L E R +G
Sbjct: 108 QPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPA-HVDEQEPATHGDGMLGTEQRAWGF 166
Query: 134 PPTNGSLA-HKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVH-----ACRRANVGPETNV 187
G LA + VV ++L K P +++ EE A+ PL G + R A + V
Sbjct: 167 ETNFGGLAEYGVVRASQLLPK-PAHLTWEEAAVS-PLCAGTAYRMLVSDRGAQMKQGDIV 224
Query: 188 MIMG-SGPIGLVTL-LAARAFGAPRIIITDVDVQRLSIARNLGAD 230
+I G SG +G + G P +++ Q+ + R LG D
Sbjct: 225 LIWGASGGLGSYAIQFVKNGGGIPVAVVS--SAQKEAAVRALGCD 267
>pdb|3B6Z|A Chain A, Lovastatin Polyketide Enoyl Reductase (Lovc) Complexed
With 2'- Phosphoadenosyl Isomer Of Crotonoyl-Coa
pdb|3B70|A Chain A, Crystal Structure Of Aspergillus Terreus Trans-Acting
Lovastatin Polyketide Enoyl Reductase (Lovc) With Bound
Nadp
Length = 371
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 55/132 (41%), Gaps = 33/132 (25%)
Query: 34 PTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE 93
P L V VR++A+ I SD + MR F +G + AG + VGS+
Sbjct: 32 PMLPRDQVYVRVEAVAINPSD---------TKMR-GQFATPW-AFLGTDYAGTVVAVGSD 80
Query: 94 VKSLEVGDRVALEPGISCGHCSLCKAGSYN-LCPEMRFFGSPPTNGSLAHKVVHPAKLCY 152
V ++VGDRV G+ N +CP P G+ + V ++
Sbjct: 81 VTHIQVGDRV---------------YGAQNEMCPRT------PDQGAFSQYTVTRGRVWA 119
Query: 153 KLPDNVSLEEGA 164
K+P +S E+ A
Sbjct: 120 KIPKGLSFEQAA 131
>pdb|4DVJ|A Chain A, Crystal Structure Of A Putative Zinc-Dependent Alcohol
Dehydrogenase Protein From Rhizobium Etli Cfn 42
pdb|4DVJ|B Chain B, Crystal Structure Of A Putative Zinc-Dependent Alcohol
Dehydrogenase Protein From Rhizobium Etli Cfn 42
Length = 363
Score = 32.0 bits (71), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 10/73 (13%)
Query: 33 LPTLGP--QDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEV 90
LP P D+ V +KA+ + D +KV++ + ++ VIG++ AGI+ V
Sbjct: 45 LPKPAPAGHDILVEVKAVSVNPVD---YKVRRSTPPDGTDW-----KVIGYDAAGIVSAV 96
Query: 91 GSEVKSLEVGDRV 103
G +V GD V
Sbjct: 97 GPDVTLFRPGDEV 109
>pdb|4EYE|A Chain A, Crystal Structure Of A Probable Oxidoreductase From
Mycobacterium Abscessus Solved By Iodide Ion Sad
pdb|4EYE|B Chain B, Crystal Structure Of A Probable Oxidoreductase From
Mycobacterium Abscessus Solved By Iodide Ion Sad
Length = 342
Score = 31.6 bits (70), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 39/101 (38%), Gaps = 8/101 (7%)
Query: 3 EAIRDDEGDKNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKK 62
EA G A L G + L P GP V V +KA G+C D
Sbjct: 13 EAQTQGPGSMKAIQAQSLSGPEGLVYTDVETPGAGPNVVVVDVKAAGVCFPDY------- 65
Query: 63 LSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRV 103
L T ++ P V G E AG++ E ++ GDRV
Sbjct: 66 LMTKGEYQLKMEPPFVPGIETAGVVRSA-PEGSGIKPGDRV 105
>pdb|3GAZ|A Chain A, Crystal Structure Of An Alcohol Dehydrogenase Superfamily
Protein From Novosphingobium Aromaticivorans
pdb|3GAZ|B Chain B, Crystal Structure Of An Alcohol Dehydrogenase Superfamily
Protein From Novosphingobium Aromaticivorans
Length = 343
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 40/102 (39%), Gaps = 9/102 (8%)
Query: 34 PTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE 93
P P V V+I+A G D K+ + P ++G + AG + VG E
Sbjct: 28 PQPAPGQVLVQIEASGTNPLDA------KIRAGEAPHAQQPLPAILGXDLAGTVVAVGPE 81
Query: 94 VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPP 135
V S VGD V G++ G L + + R S P
Sbjct: 82 VDSFRVGDAVF---GLTGGVGGLQGTHAQFAAVDARLLASKP 120
>pdb|3GU9|A Chain A, R228a Mutation In Organophosphorus Hydrolase From
Deinococcu Radiodurans
Length = 331
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 219 QRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATR 278
Q+ + +LGAD A++ D +TD + + G+ ++FD +G + T +A R
Sbjct: 193 QQAELLTSLGADP-ARIMIGHMDGNTDPAYHRETLRHGVSIAFDAIGLQGMVGTPTDAER 251
Query: 279 PGGKVCLIG 287
L+G
Sbjct: 252 LSVLTTLLG 260
>pdb|3GTF|A Chain A, D71gE101GV235L MUTANT IN ORGANOPHOSPHORUS HYDROLASE FROM D
Radiodurans
Length = 337
Score = 29.6 bits (65), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 219 QRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATR 278
Q+ + +LGAD A++ D +TD + + G+ ++FD +G + T +A R
Sbjct: 199 QQAELLTSLGADP-ARIMIGHMDGNTDPAYHRETLRHGVSIAFDRIGLQGMLGTPTDAER 257
Query: 279 PGGKVCLIG 287
L+G
Sbjct: 258 LSVLTTLLG 266
>pdb|3OT5|A Chain A, 2.2 Angstrom Resolution Crystal Structure Of Putative
Udp-N- Acetylglucosamine 2-Epimerase From Listeria
Monocytogenes
pdb|3OT5|B Chain B, 2.2 Angstrom Resolution Crystal Structure Of Putative
Udp-N- Acetylglucosamine 2-Epimerase From Listeria
Monocytogenes
pdb|3OT5|C Chain C, 2.2 Angstrom Resolution Crystal Structure Of Putative
Udp-N- Acetylglucosamine 2-Epimerase From Listeria
Monocytogenes
pdb|3OT5|D Chain D, 2.2 Angstrom Resolution Crystal Structure Of Putative
Udp-N- Acetylglucosamine 2-Epimerase From Listeria
Monocytogenes
Length = 403
Score = 29.3 bits (64), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 39/101 (38%), Gaps = 8/101 (7%)
Query: 28 IQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGII 87
+ P HL + VR KA+ I G ++ L + NF+ K +V + G+
Sbjct: 261 VYPMHL------NPAVREKAMAILGGHERIHLIEPLDAIDFHNFLRKSYLVFT-DSGGVQ 313
Query: 88 EEV-GSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 127
EE G V L + D GI G L NL E
Sbjct: 314 EEAPGMGVPVLVLRDTTERPEGIEAGTLKLIGTNKENLIKE 354
>pdb|3GU2|A Chain A, Y97lG100-E101- Mutant In Organophosphorus Hydrolase
Length = 336
Score = 28.9 bits (63), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 219 QRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATR 278
Q+ + +LGAD A++ D +TD + + G+ ++FD +G + T +A R
Sbjct: 198 QQAELLTSLGADP-ARIMIGHMDGNTDPAYHRETLRHGVSIAFDRIGLQGMVGTPTDAER 256
Query: 279 PGGKVCLIG 287
L+G
Sbjct: 257 LSVLTTLLG 265
>pdb|3GTX|A Chain A, D71gE101G MUTANT IN ORGANOPHOSPHORUS HYDROLASE FROM
DEINOCO Radiodurans
Length = 339
Score = 28.9 bits (63), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 219 QRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATR 278
Q+ + +LGAD A++ D +TD + + G+ ++FD +G + T +A R
Sbjct: 201 QQAELLTSLGADP-ARIMIGHMDGNTDPAYHRETLRHGVSIAFDRIGLQGMVGTPTDAER 259
Query: 279 PGGKVCLIG 287
L+G
Sbjct: 260 LSVLTTLLG 268
>pdb|2ZC1|A Chain A, Organophosphorus Hydrolase From Deinococcus Radiodurans
Length = 333
Score = 28.9 bits (63), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 219 QRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATR 278
Q+ + +LGAD A++ D +TD + + G+ ++FD +G + T +A R
Sbjct: 195 QQAELLTSLGADP-ARIMIGHMDGNTDPAYHRETLRHGVSIAFDRIGLQGMVGTPTDAER 253
Query: 279 PGGKVCLIG 287
L+G
Sbjct: 254 LSVLTTLLG 262
>pdb|3FDK|A Chain A, Crystal Structure Of Hydrolase Dr0930 With Promiscuous
Catalytic Activity
Length = 323
Score = 28.9 bits (63), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 219 QRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATR 278
Q+ + +LGAD A++ D +TD + + G+ ++FD +G + T +A R
Sbjct: 185 QQAELLTSLGADP-ARIMIGHMDGNTDPAYHRETLRHGVSIAFDRIGLQGMVGTPTDAER 243
Query: 279 PGGKVCLIG 287
L+G
Sbjct: 244 LSVLTTLLG 252
>pdb|3HTW|A Chain A, Organophosphorus Hydrolase From Deinococcus Radiodurans
With Cacodylate Bound
Length = 328
Score = 28.9 bits (63), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 219 QRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATR 278
Q+ + +LGAD A++ D +TD + + G+ ++FD +G + T +A R
Sbjct: 190 QQAELLTSLGADP-ARIMIGHMDGNTDPAYHRETLRHGVSIAFDRIGLQGMVGTPTDAER 248
Query: 279 PGGKVCLIG 287
L+G
Sbjct: 249 LSVLTTLLG 257
>pdb|3GTI|A Chain A, D71gE101GM234L MUTANT IN ORGANOPHOSPHORUS HYDROLASE FROM D
Radiodurans
Length = 337
Score = 28.9 bits (63), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 219 QRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATR 278
Q+ + +LGAD A++ D +TD + + G+ ++FD +G + T +A R
Sbjct: 199 QQAELLTSLGADP-ARIMIGHMDGNTDPAYHRETLRHGVSIAFDRIGLQGLVGTPTDAER 257
Query: 279 PGGKVCLIG 287
L+G
Sbjct: 258 LSVLTTLLG 266
>pdb|3GU1|A Chain A, Y97w Mutant In Organophosphorus Hydrolase From Deinococcus
Radiodurans
Length = 337
Score = 28.9 bits (63), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 219 QRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATR 278
Q+ + +LGAD A++ D +TD + + G+ ++FD +G + T +A R
Sbjct: 199 QQAELLTSLGADP-ARIMIGHMDGNTDPAYHRETLRHGVSIAFDRIGLQGMVGTPTDAER 257
Query: 279 PGGKVCLIG 287
L+G
Sbjct: 258 LSVLTTLLG 266
>pdb|3GTH|A Chain A, D71gE101GM234I MUTANT IN ORGANOPHOSPHORUS HYDROLASE FROM D
Radiodurans
Length = 337
Score = 28.9 bits (63), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 219 QRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATR 278
Q+ + +LGAD A++ D +TD + + G+ ++FD +G + T +A R
Sbjct: 199 QQAELLTSLGADP-ARIMIGHMDGNTDPAYHRETLRHGVSIAFDRIGLQGIVGTPTDAER 257
Query: 279 PGGKVCLIG 287
L+G
Sbjct: 258 LSVLTTLLG 266
>pdb|3TQH|A Chain A, Structure Of The Quinone Oxidoreductase From Coxiella
Burnetii
Length = 321
Score = 28.5 bits (62), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 27/44 (61%), Gaps = 5/44 (11%)
Query: 65 TMRCANFIVKK-----PMVIGHECAGIIEEVGSEVKSLEVGDRV 103
T + F+ KK P +G++ +G + E+GS+V ++ +GD+V
Sbjct: 52 TRNGSGFVAKKLKNNLPSGLGYDFSGEVIELGSDVNNVNIGDKV 95
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.138 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,870,478
Number of Sequences: 62578
Number of extensions: 451763
Number of successful extensions: 1557
Number of sequences better than 100.0: 123
Number of HSP's better than 100.0 without gapping: 94
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 1186
Number of HSP's gapped (non-prelim): 159
length of query: 366
length of database: 14,973,337
effective HSP length: 100
effective length of query: 266
effective length of database: 8,715,537
effective search space: 2318332842
effective search space used: 2318332842
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)