Query 017793
Match_columns 366
No_of_seqs 133 out of 1517
Neff 9.8
Searched_HMMs 46136
Date Fri Mar 29 03:29:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017793.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017793hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0024 Sorbitol dehydrogenase 100.0 1.1E-62 2.4E-67 422.0 32.7 346 11-365 1-351 (354)
2 COG1064 AdhP Zn-dependent alco 100.0 3.1E-62 6.6E-67 432.8 32.3 330 12-366 1-337 (339)
3 COG1062 AdhC Zn-dependent alco 100.0 7.4E-55 1.6E-59 377.1 31.1 338 13-366 1-366 (366)
4 PRK09880 L-idonate 5-dehydroge 100.0 6.5E-53 1.4E-57 390.0 37.5 336 14-366 4-343 (343)
5 cd08239 THR_DH_like L-threonin 100.0 1.1E-50 2.3E-55 375.0 37.6 335 15-366 1-339 (339)
6 cd08281 liver_ADH_like1 Zinc-d 100.0 1.5E-50 3.3E-55 377.9 37.5 334 15-364 1-371 (371)
7 KOG0023 Alcohol dehydrogenase, 100.0 3E-51 6.4E-56 350.6 29.4 335 11-366 6-354 (360)
8 PLN02740 Alcohol dehydrogenase 100.0 9.8E-50 2.1E-54 373.5 37.1 343 11-366 7-381 (381)
9 TIGR03451 mycoS_dep_FDH mycoth 100.0 1.1E-49 2.5E-54 370.4 36.8 337 14-366 1-358 (358)
10 PLN02827 Alcohol dehydrogenase 100.0 1.9E-49 4.2E-54 370.5 36.8 336 14-366 12-376 (378)
11 PRK10309 galactitol-1-phosphat 100.0 1E-48 2.2E-53 362.9 37.9 335 15-366 1-346 (347)
12 COG1063 Tdh Threonine dehydrog 100.0 5.6E-49 1.2E-53 361.9 35.8 337 15-366 1-350 (350)
13 KOG0022 Alcohol dehydrogenase, 100.0 2.4E-49 5.3E-54 337.2 30.4 340 13-366 6-375 (375)
14 TIGR02818 adh_III_F_hyde S-(hy 100.0 1.1E-48 2.4E-53 364.7 37.8 337 15-366 2-368 (368)
15 TIGR02819 fdhA_non_GSH formald 100.0 6.4E-49 1.4E-53 367.6 35.9 337 14-366 2-390 (393)
16 cd08301 alcohol_DH_plants Plan 100.0 3.2E-48 6.9E-53 362.3 37.2 337 14-364 2-368 (369)
17 COG0604 Qor NADPH:quinone redu 100.0 1.1E-48 2.3E-53 355.3 32.9 309 15-366 1-326 (326)
18 cd08233 butanediol_DH_like (2R 100.0 9.8E-48 2.1E-52 356.9 38.1 345 15-365 1-351 (351)
19 cd08300 alcohol_DH_class_III c 100.0 8.5E-48 1.9E-52 359.0 37.5 337 14-365 2-368 (368)
20 PLN02586 probable cinnamyl alc 100.0 5.9E-48 1.3E-52 358.4 35.4 336 8-366 6-353 (360)
21 cd08277 liver_alcohol_DH_like 100.0 2.1E-47 4.6E-52 356.0 37.0 336 14-365 2-365 (365)
22 KOG1197 Predicted quinone oxid 100.0 1.3E-48 2.8E-53 322.9 24.6 308 11-365 5-329 (336)
23 PLN02178 cinnamyl-alcohol dehy 100.0 4.7E-47 1E-51 353.4 35.6 320 24-366 17-348 (375)
24 TIGR03201 dearomat_had 6-hydro 100.0 5.7E-47 1.2E-51 351.1 35.4 333 19-366 3-349 (349)
25 cd08230 glucose_DH Glucose deh 100.0 9.1E-47 2E-51 350.6 34.7 331 15-366 1-355 (355)
26 TIGR02822 adh_fam_2 zinc-bindi 100.0 1.6E-46 3.4E-51 344.8 34.0 312 24-364 13-328 (329)
27 PLN02702 L-idonate 5-dehydroge 100.0 1.4E-45 3E-50 343.9 39.3 350 11-365 14-363 (364)
28 cd08237 ribitol-5-phosphate_DH 100.0 6.3E-46 1.4E-50 342.6 30.0 326 14-366 2-339 (341)
29 PLN02514 cinnamyl-alcohol dehy 100.0 5.1E-45 1.1E-49 338.7 35.7 329 15-366 10-350 (357)
30 PRK10083 putative oxidoreducta 100.0 1.6E-44 3.4E-49 333.9 36.8 335 15-366 1-337 (339)
31 cd08231 MDR_TM0436_like Hypoth 100.0 5.2E-44 1.1E-48 333.1 37.5 336 16-365 2-360 (361)
32 TIGR01202 bchC 2-desacetyl-2-h 100.0 2.3E-44 5E-49 327.6 31.7 306 14-365 1-308 (308)
33 cd08238 sorbose_phosphate_red 100.0 9.8E-44 2.1E-48 335.8 36.2 334 13-366 1-368 (410)
34 cd08256 Zn_ADH2 Alcohol dehydr 100.0 2.8E-43 6.1E-48 326.8 37.6 344 15-364 1-350 (350)
35 cd08285 NADP_ADH NADP(H)-depen 100.0 3.9E-43 8.5E-48 326.0 37.7 338 15-366 1-351 (351)
36 cd08299 alcohol_DH_class_I_II_ 100.0 1.5E-42 3.2E-47 323.9 37.9 337 15-366 8-373 (373)
37 cd08296 CAD_like Cinnamyl alco 100.0 1.1E-42 2.3E-47 320.7 36.2 329 15-365 1-333 (333)
38 cd05285 sorbitol_DH Sorbitol d 100.0 1.5E-42 3.2E-47 321.1 36.6 338 17-365 1-342 (343)
39 cd08278 benzyl_alcohol_DH Benz 100.0 6.5E-42 1.4E-46 319.1 36.3 334 13-365 1-365 (365)
40 cd05279 Zn_ADH1 Liver alcohol 100.0 8.2E-42 1.8E-46 318.4 36.6 333 16-364 2-364 (365)
41 cd08283 FDH_like_1 Glutathione 100.0 1.3E-41 2.9E-46 319.0 37.1 338 15-365 1-385 (386)
42 cd08284 FDH_like_2 Glutathione 100.0 2.3E-41 4.9E-46 313.4 36.4 334 15-365 1-343 (344)
43 cd08246 crotonyl_coA_red croto 100.0 1.7E-41 3.7E-46 319.5 35.1 347 11-365 9-392 (393)
44 cd08232 idonate-5-DH L-idonate 100.0 3.3E-41 7.1E-46 311.8 36.3 334 19-366 2-339 (339)
45 cd05278 FDH_like Formaldehyde 100.0 2.6E-41 5.5E-46 313.5 35.5 337 15-365 1-346 (347)
46 cd08262 Zn_ADH8 Alcohol dehydr 100.0 4E-41 8.6E-46 311.4 36.3 334 15-365 1-341 (341)
47 PRK05396 tdh L-threonine 3-deh 100.0 4.5E-41 9.7E-46 311.0 36.5 337 15-366 1-340 (341)
48 cd08242 MDR_like Medium chain 100.0 4.6E-41 1E-45 308.1 35.9 318 15-365 1-318 (319)
49 cd05284 arabinose_DH_like D-ar 100.0 4.7E-41 1E-45 310.8 36.1 333 15-365 1-339 (340)
50 cd08287 FDH_like_ADH3 formalde 100.0 5.8E-41 1.3E-45 310.8 36.3 334 15-365 1-344 (345)
51 cd08286 FDH_like_ADH2 formalde 100.0 1.2E-40 2.6E-45 308.7 37.4 338 15-366 1-345 (345)
52 cd08263 Zn_ADH10 Alcohol dehyd 100.0 9.4E-41 2E-45 311.8 36.2 336 15-365 1-367 (367)
53 cd08261 Zn_ADH7 Alcohol dehydr 100.0 2.2E-40 4.8E-45 305.9 38.0 335 15-366 1-337 (337)
54 cd08265 Zn_ADH3 Alcohol dehydr 100.0 1.6E-40 3.5E-45 311.6 36.6 345 12-364 26-383 (384)
55 cd08235 iditol_2_DH_like L-idi 100.0 3.1E-40 6.8E-45 305.7 37.5 335 15-365 1-343 (343)
56 cd08240 6_hydroxyhexanoate_dh_ 100.0 2.1E-40 4.6E-45 307.6 36.3 341 15-365 1-349 (350)
57 cd08282 PFDH_like Pseudomonas 100.0 3E-40 6.5E-45 309.0 37.3 334 15-366 1-375 (375)
58 cd08279 Zn_ADH_class_III Class 100.0 2.8E-40 6E-45 308.1 36.9 334 15-363 1-362 (363)
59 cd08236 sugar_DH NAD(P)-depend 100.0 3.9E-40 8.3E-45 305.1 36.5 333 15-364 1-343 (343)
60 PRK09422 ethanol-active dehydr 100.0 3.5E-40 7.7E-45 304.7 36.1 331 15-366 1-336 (338)
61 cd05283 CAD1 Cinnamyl alcohol 100.0 2.7E-40 5.8E-45 305.2 34.1 326 17-365 2-337 (337)
62 cd08291 ETR_like_1 2-enoyl thi 100.0 2.1E-40 4.4E-45 304.4 31.8 305 15-365 1-324 (324)
63 TIGR01751 crot-CoA-red crotony 100.0 4.2E-40 9.1E-45 310.3 34.6 348 11-366 4-387 (398)
64 cd08234 threonine_DH_like L-th 100.0 1.7E-39 3.6E-44 299.7 36.6 331 15-364 1-333 (334)
65 cd05281 TDH Threonine dehydrog 100.0 1.6E-39 3.5E-44 300.6 36.2 336 15-365 1-340 (341)
66 cd08260 Zn_ADH6 Alcohol dehydr 100.0 3.1E-39 6.7E-44 299.2 36.8 335 15-365 1-344 (345)
67 PLN03154 putative allyl alcoho 100.0 1.3E-39 2.8E-44 301.2 33.6 309 9-366 3-345 (348)
68 PRK13771 putative alcohol dehy 100.0 1.6E-39 3.4E-44 299.9 33.4 326 15-365 1-332 (334)
69 TIGR00692 tdh L-threonine 3-de 100.0 4.1E-39 8.8E-44 297.8 34.9 329 24-366 9-340 (340)
70 cd08297 CAD3 Cinnamyl alcohol 100.0 9.8E-39 2.1E-43 295.4 36.5 334 15-366 1-341 (341)
71 cd08254 hydroxyacyl_CoA_DH 6-h 100.0 2.3E-38 5.1E-43 292.5 36.0 333 15-366 1-338 (338)
72 TIGR03366 HpnZ_proposed putati 100.0 1.6E-39 3.5E-44 292.0 25.3 260 78-345 1-279 (280)
73 cd08259 Zn_ADH5 Alcohol dehydr 100.0 1E-37 2.2E-42 287.4 35.5 327 15-365 1-332 (332)
74 cd08293 PTGR2 Prostaglandin re 100.0 4.4E-38 9.6E-43 291.5 33.1 298 24-366 21-345 (345)
75 cd08298 CAD2 Cinnamyl alcohol 100.0 1.3E-37 2.8E-42 286.5 34.6 320 15-364 1-329 (329)
76 TIGR02825 B4_12hDH leukotriene 100.0 4.3E-38 9.4E-43 289.1 30.4 289 22-365 15-325 (325)
77 cd08292 ETR_like_2 2-enoyl thi 100.0 1.2E-37 2.5E-42 286.2 33.2 306 15-365 1-324 (324)
78 KOG0025 Zn2+-binding dehydroge 100.0 4.7E-38 1E-42 264.9 27.3 315 8-365 13-351 (354)
79 cd08295 double_bond_reductase_ 100.0 8.4E-38 1.8E-42 288.7 31.5 295 24-366 19-338 (338)
80 cd08294 leukotriene_B4_DH_like 100.0 1.1E-37 2.4E-42 286.9 32.2 297 14-366 2-329 (329)
81 cd08264 Zn_ADH_like2 Alcohol d 100.0 3E-37 6.4E-42 283.7 32.5 319 15-363 1-325 (325)
82 cd08266 Zn_ADH_like1 Alcohol d 100.0 1.1E-36 2.3E-41 281.5 35.5 334 15-366 1-342 (342)
83 cd08274 MDR9 Medium chain dehy 100.0 5E-37 1.1E-41 285.1 33.3 329 15-365 1-349 (350)
84 COG2130 Putative NADP-dependen 100.0 5E-37 1.1E-41 261.4 26.3 294 22-366 23-338 (340)
85 cd08245 CAD Cinnamyl alcohol d 100.0 4.1E-36 8.9E-41 276.7 34.1 325 16-364 1-330 (330)
86 cd08258 Zn_ADH4 Alcohol dehydr 100.0 2.8E-36 6.1E-41 274.5 32.2 298 15-327 1-306 (306)
87 cd08269 Zn_ADH9 Alcohol dehydr 100.0 3E-35 6.5E-40 268.7 33.6 300 22-364 3-311 (312)
88 TIGR02817 adh_fam_1 zinc-bindi 100.0 1.5E-35 3.3E-40 273.5 31.4 298 23-365 14-334 (336)
89 cd08290 ETR 2-enoyl thioester 100.0 1.8E-35 4E-40 273.6 31.8 313 15-366 1-341 (341)
90 cd08244 MDR_enoyl_red Possible 100.0 6.9E-35 1.5E-39 267.7 34.0 311 15-366 1-324 (324)
91 KOG1198 Zinc-binding oxidoredu 100.0 1.2E-35 2.7E-40 269.7 26.4 299 25-366 19-345 (347)
92 PTZ00354 alcohol dehydrogenase 100.0 2E-34 4.3E-39 265.8 33.6 308 14-366 1-328 (334)
93 cd08270 MDR4 Medium chain dehy 100.0 1.9E-34 4.1E-39 262.6 32.6 293 15-366 1-305 (305)
94 cd08249 enoyl_reductase_like e 100.0 8E-35 1.7E-39 268.9 29.8 311 15-366 1-339 (339)
95 PRK10754 quinone oxidoreductas 100.0 1.4E-34 3E-39 266.1 30.7 309 14-365 1-326 (327)
96 cd08276 MDR7 Medium chain dehy 100.0 1E-33 2.2E-38 261.1 35.5 329 15-366 1-336 (336)
97 cd08250 Mgc45594_like Mgc45594 100.0 5E-34 1.1E-38 262.7 32.5 306 14-365 1-329 (329)
98 cd05280 MDR_yhdh_yhfp Yhdh and 100.0 3.1E-33 6.7E-38 256.9 33.2 308 15-366 1-325 (325)
99 TIGR02823 oxido_YhdH putative 100.0 2.1E-33 4.6E-38 257.8 31.8 306 16-366 1-323 (323)
100 cd05282 ETR_like 2-enoyl thioe 100.0 1.8E-33 3.9E-38 258.2 30.9 296 25-365 13-323 (323)
101 cd08289 MDR_yhfp_like Yhfp put 100.0 2.9E-33 6.2E-38 257.3 31.7 310 15-366 1-326 (326)
102 cd08243 quinone_oxidoreductase 100.0 3.6E-33 7.9E-38 255.7 32.1 305 15-364 1-319 (320)
103 cd08252 AL_MDR Arginate lyase 100.0 1.3E-32 2.7E-37 254.1 32.8 306 15-365 1-336 (336)
104 cd08253 zeta_crystallin Zeta-c 100.0 5.9E-32 1.3E-36 247.8 32.6 312 15-366 1-325 (325)
105 cd08248 RTN4I1 Human Reticulon 100.0 5.2E-32 1.1E-36 251.4 31.7 312 15-365 1-350 (350)
106 cd08288 MDR_yhdh Yhdh putative 100.0 9.3E-32 2E-36 247.0 33.0 307 15-366 1-324 (324)
107 cd08247 AST1_like AST1 is a cy 100.0 6E-32 1.3E-36 251.1 31.8 315 16-366 2-352 (352)
108 cd05276 p53_inducible_oxidored 100.0 2.1E-31 4.6E-36 243.8 33.2 305 15-364 1-323 (323)
109 cd05288 PGDH Prostaglandin deh 100.0 1.3E-31 2.9E-36 246.5 30.9 292 24-364 18-329 (329)
110 cd08272 MDR6 Medium chain dehy 100.0 2.6E-31 5.7E-36 243.8 32.5 307 15-366 1-326 (326)
111 cd08271 MDR5 Medium chain dehy 100.0 2.2E-31 4.7E-36 244.4 31.5 308 15-366 1-325 (325)
112 cd05286 QOR2 Quinone oxidoredu 100.0 4.1E-31 8.8E-36 241.6 32.7 295 24-365 12-319 (320)
113 cd08273 MDR8 Medium chain dehy 100.0 2.8E-31 6E-36 244.6 31.3 299 16-364 2-330 (331)
114 cd05188 MDR Medium chain reduc 100.0 4.2E-31 9.1E-36 236.1 28.2 266 40-323 1-270 (271)
115 cd08251 polyketide_synthase po 100.0 8.3E-31 1.8E-35 238.0 30.3 288 33-364 2-303 (303)
116 cd08268 MDR2 Medium chain dehy 100.0 9.6E-30 2.1E-34 233.5 34.5 311 15-365 1-327 (328)
117 TIGR02824 quinone_pig3 putativ 100.0 7.2E-30 1.6E-34 234.1 33.4 307 15-366 1-325 (325)
118 cd05289 MDR_like_2 alcohol deh 100.0 2.7E-30 5.9E-35 235.2 28.5 301 15-364 1-309 (309)
119 cd08241 QOR1 Quinone oxidoredu 100.0 9.5E-30 2.1E-34 233.0 32.1 305 15-365 1-323 (323)
120 KOG1202 Animal-type fatty acid 100.0 5.4E-32 1.2E-36 262.0 16.3 320 2-366 1400-1741(2376)
121 cd08267 MDR1 Medium chain dehy 100.0 6.6E-30 1.4E-34 234.0 28.1 295 27-364 15-319 (319)
122 cd08275 MDR3 Medium chain dehy 100.0 4.9E-29 1.1E-33 230.0 33.7 296 24-366 12-337 (337)
123 cd05195 enoyl_red enoyl reduct 100.0 6.5E-29 1.4E-33 223.9 27.8 276 39-364 1-293 (293)
124 cd08255 2-desacetyl-2-hydroxye 100.0 2.9E-28 6.3E-33 218.9 26.8 248 69-364 14-277 (277)
125 smart00829 PKS_ER Enoylreducta 100.0 9.2E-28 2E-32 216.1 27.5 271 43-364 2-288 (288)
126 KOG1196 Predicted NAD-dependen 99.9 1E-25 2.2E-30 191.8 23.9 282 35-366 34-340 (343)
127 PF08240 ADH_N: Alcohol dehydr 99.9 6.3E-23 1.4E-27 157.1 8.2 109 38-154 1-109 (109)
128 PF00107 ADH_zinc_N: Zinc-bind 99.7 1E-16 2.2E-21 126.9 13.3 128 194-326 1-130 (130)
129 PRK09424 pntA NAD(P) transhydr 99.4 5.1E-12 1.1E-16 120.1 15.5 155 181-336 162-339 (509)
130 cd00401 AdoHcyase S-adenosyl-L 99.4 1.9E-11 4.2E-16 113.4 18.1 171 173-364 189-374 (413)
131 PF13602 ADH_zinc_N_2: Zinc-bi 99.3 9.5E-13 2.1E-17 103.6 2.7 117 227-364 1-127 (127)
132 PRK11873 arsM arsenite S-adeno 98.7 2.9E-07 6.4E-12 82.3 12.4 173 178-364 72-259 (272)
133 TIGR00561 pntA NAD(P) transhyd 98.6 7.8E-07 1.7E-11 84.8 12.9 107 182-289 162-286 (511)
134 PRK00517 prmA ribosomal protei 98.4 1.4E-05 3E-10 70.5 15.0 131 140-290 79-216 (250)
135 COG2518 Pcm Protein-L-isoaspar 98.3 8.8E-06 1.9E-10 68.0 10.4 114 163-288 52-170 (209)
136 cd05213 NAD_bind_Glutamyl_tRNA 98.3 2.7E-06 5.9E-11 77.3 7.8 108 149-269 139-251 (311)
137 PRK05476 S-adenosyl-L-homocyst 98.2 2.5E-05 5.4E-10 73.2 13.4 102 172-290 198-302 (425)
138 PRK08306 dipicolinate synthase 98.2 4.5E-05 9.8E-10 68.8 14.2 111 183-309 151-261 (296)
139 TIGR01035 hemA glutamyl-tRNA r 98.1 1.8E-07 4E-12 88.4 -3.2 159 78-268 89-252 (417)
140 TIGR00936 ahcY adenosylhomocys 98.0 8.7E-05 1.9E-09 69.2 12.1 101 173-290 182-285 (406)
141 PLN02494 adenosylhomocysteinas 97.8 0.00017 3.7E-09 68.0 10.7 101 173-290 241-344 (477)
142 PRK00045 hemA glutamyl-tRNA re 97.8 4.8E-05 1E-09 72.3 6.9 159 78-268 91-254 (423)
143 TIGR00518 alaDH alanine dehydr 97.8 0.00019 4.2E-09 66.8 10.8 97 183-289 166-269 (370)
144 PRK00377 cbiT cobalt-precorrin 97.8 0.0004 8.6E-09 58.9 11.9 102 176-285 33-143 (198)
145 PRK12771 putative glutamate sy 97.7 2.9E-05 6.4E-10 76.8 4.4 81 180-268 133-234 (564)
146 PF11017 DUF2855: Protein of u 97.7 0.0034 7.4E-08 56.2 16.3 248 84-358 38-312 (314)
147 COG2242 CobL Precorrin-6B meth 97.6 0.0011 2.3E-08 54.5 11.3 101 177-286 28-134 (187)
148 PRK13943 protein-L-isoaspartat 97.6 0.00089 1.9E-08 60.9 11.9 103 175-286 72-179 (322)
149 TIGR00406 prmA ribosomal prote 97.6 0.00052 1.1E-08 61.8 10.3 97 181-289 157-261 (288)
150 COG2264 PrmA Ribosomal protein 97.6 0.0011 2.3E-08 59.0 11.6 130 149-290 130-266 (300)
151 PRK13942 protein-L-isoaspartat 97.6 0.0022 4.8E-08 55.0 13.3 104 174-286 67-175 (212)
152 PRK08324 short chain dehydroge 97.6 0.00078 1.7E-08 68.2 11.9 140 138-289 385-559 (681)
153 PF01135 PCMT: Protein-L-isoas 97.5 0.00044 9.5E-09 58.9 8.4 107 171-286 60-171 (209)
154 COG2230 Cfa Cyclopropane fatty 97.5 0.0032 6.9E-08 55.6 13.2 104 176-292 65-181 (283)
155 TIGR02853 spore_dpaA dipicolin 97.5 0.0013 2.9E-08 59.0 11.1 99 183-295 150-248 (287)
156 TIGR02469 CbiT precorrin-6Y C5 97.5 0.0036 7.9E-08 48.3 12.2 102 177-286 13-121 (124)
157 PF06325 PrmA: Ribosomal prote 97.4 0.0006 1.3E-08 61.0 8.1 130 147-291 127-263 (295)
158 PTZ00075 Adenosylhomocysteinas 97.4 0.0012 2.6E-08 62.6 10.3 92 181-289 251-343 (476)
159 TIGR00080 pimt protein-L-isoas 97.4 0.0043 9.2E-08 53.3 12.6 104 174-286 68-176 (215)
160 PRK14967 putative methyltransf 97.3 0.0058 1.3E-07 52.8 12.5 99 176-286 29-158 (223)
161 PRK13944 protein-L-isoaspartat 97.3 0.0084 1.8E-07 51.1 13.1 103 175-286 64-172 (205)
162 PF01488 Shikimate_DH: Shikima 97.2 0.0019 4.1E-08 51.1 8.1 73 183-267 11-86 (135)
163 PF12847 Methyltransf_18: Meth 97.2 0.0015 3.2E-08 49.6 7.3 93 183-285 1-109 (112)
164 COG4221 Short-chain alcohol de 97.2 0.0083 1.8E-07 51.4 12.1 80 184-266 6-91 (246)
165 KOG1209 1-Acyl dihydroxyaceton 97.2 0.0081 1.8E-07 50.2 11.2 113 183-297 6-148 (289)
166 PF02353 CMAS: Mycolic acid cy 97.2 0.0015 3.3E-08 58.1 7.5 99 176-286 55-165 (273)
167 PRK05786 fabG 3-ketoacyl-(acyl 97.1 0.016 3.5E-07 50.3 13.6 105 183-289 4-137 (238)
168 PRK11705 cyclopropane fatty ac 97.1 0.0059 1.3E-07 57.2 11.2 99 177-287 161-267 (383)
169 PRK00107 gidB 16S rRNA methylt 97.0 0.0089 1.9E-07 50.0 10.3 96 181-286 43-144 (187)
170 PRK05993 short chain dehydroge 97.0 0.0072 1.6E-07 54.1 10.5 82 183-266 3-86 (277)
171 PF02826 2-Hacid_dh_C: D-isome 97.0 0.012 2.6E-07 48.9 11.0 88 183-287 35-127 (178)
172 TIGR00438 rrmJ cell division p 96.9 0.019 4E-07 48.2 11.7 100 179-286 28-145 (188)
173 COG1748 LYS9 Saccharopine dehy 96.9 0.013 2.9E-07 54.3 11.0 97 185-288 2-100 (389)
174 COG2226 UbiE Methylase involve 96.8 0.021 4.6E-07 49.4 11.6 107 177-293 45-162 (238)
175 PRK07402 precorrin-6B methylas 96.8 0.032 7E-07 47.1 12.3 104 176-287 33-142 (196)
176 COG0300 DltE Short-chain dehyd 96.8 0.043 9.3E-07 48.2 13.2 85 182-267 4-95 (265)
177 COG2519 GCD14 tRNA(1-methylade 96.7 0.036 7.8E-07 47.9 11.9 104 175-287 86-195 (256)
178 PRK12742 oxidoreductase; Provi 96.7 0.033 7.1E-07 48.3 12.2 101 183-289 5-133 (237)
179 COG0686 Ald Alanine dehydrogen 96.7 0.0067 1.5E-07 53.6 7.5 97 183-288 167-269 (371)
180 COG2227 UbiG 2-polyprenyl-3-me 96.7 0.022 4.7E-07 48.8 10.4 95 182-286 58-160 (243)
181 PF01262 AlaDh_PNT_C: Alanine 96.7 0.0047 1E-07 50.8 6.3 100 183-287 19-139 (168)
182 PRK00312 pcm protein-L-isoaspa 96.7 0.05 1.1E-06 46.5 12.9 101 175-286 70-174 (212)
183 PRK01581 speE spermidine synth 96.5 0.039 8.5E-07 50.7 11.6 100 181-288 148-269 (374)
184 PRK08017 oxidoreductase; Provi 96.5 0.023 4.9E-07 50.0 10.0 80 185-266 3-84 (256)
185 PRK08317 hypothetical protein; 96.5 0.035 7.6E-07 48.2 11.1 103 176-287 12-124 (241)
186 PRK04457 spermidine synthase; 96.5 0.037 8E-07 49.1 11.2 96 182-285 65-175 (262)
187 PRK04148 hypothetical protein; 96.5 0.045 9.8E-07 42.7 10.2 91 179-281 12-102 (134)
188 PRK00811 spermidine synthase; 96.5 0.02 4.4E-07 51.4 9.5 98 182-287 75-191 (283)
189 PRK08261 fabG 3-ketoacyl-(acyl 96.5 0.057 1.2E-06 52.0 13.3 81 183-266 209-294 (450)
190 KOG1205 Predicted dehydrogenas 96.5 0.074 1.6E-06 47.2 12.5 109 183-293 11-155 (282)
191 PRK00536 speE spermidine synth 96.4 0.017 3.6E-07 50.9 8.3 101 182-288 71-172 (262)
192 PRK06182 short chain dehydroge 96.4 0.034 7.4E-07 49.5 10.4 81 183-266 2-84 (273)
193 PRK12828 short chain dehydroge 96.4 0.096 2.1E-06 45.3 13.0 81 183-266 6-92 (239)
194 PRK05693 short chain dehydroge 96.3 0.04 8.8E-07 49.1 10.2 79 185-266 2-82 (274)
195 TIGR03840 TMPT_Se_Te thiopurin 96.2 0.083 1.8E-06 45.2 11.4 98 181-288 32-153 (213)
196 PF08704 GCD14: tRNA methyltra 96.2 0.018 3.8E-07 50.3 7.3 108 175-287 32-146 (247)
197 COG3967 DltE Short-chain dehyd 96.2 0.041 8.9E-07 45.9 8.9 82 183-267 4-89 (245)
198 TIGR02356 adenyl_thiF thiazole 96.2 0.098 2.1E-06 44.4 11.7 34 184-217 21-54 (202)
199 PF13460 NAD_binding_10: NADH( 96.2 0.044 9.6E-07 45.4 9.6 91 187-288 1-98 (183)
200 TIGR00446 nop2p NOL1/NOP2/sun 96.2 0.18 3.9E-06 44.8 13.7 99 179-286 67-198 (264)
201 PLN03209 translocon at the inn 96.2 0.087 1.9E-06 51.5 12.4 46 177-223 73-119 (576)
202 PRK07502 cyclohexadienyl dehyd 96.2 0.076 1.7E-06 48.3 11.6 91 185-288 7-101 (307)
203 PRK08618 ornithine cyclodeamin 96.2 0.12 2.7E-06 47.3 12.9 100 177-291 120-225 (325)
204 PRK11207 tellurite resistance 96.2 0.082 1.8E-06 44.7 10.9 98 177-286 24-133 (197)
205 PLN03075 nicotianamine synthas 96.2 0.053 1.2E-06 48.5 10.0 98 182-286 122-232 (296)
206 COG0421 SpeE Spermidine syntha 96.1 0.063 1.4E-06 47.9 10.4 97 185-286 78-189 (282)
207 PRK08287 cobalt-precorrin-6Y C 96.1 0.12 2.6E-06 43.2 11.8 99 177-286 25-130 (187)
208 PRK03369 murD UDP-N-acetylmura 96.1 0.043 9.3E-07 53.4 10.2 73 181-267 9-81 (488)
209 TIGR00138 gidB 16S rRNA methyl 96.1 0.053 1.1E-06 45.2 9.4 93 184-286 43-141 (181)
210 PRK04266 fibrillarin; Provisio 96.1 0.14 3E-06 44.3 12.2 104 177-286 66-175 (226)
211 PRK07326 short chain dehydroge 96.1 0.15 3.2E-06 44.2 12.7 82 183-266 5-92 (237)
212 TIGR02752 MenG_heptapren 2-hep 96.1 0.095 2.1E-06 45.4 11.4 103 177-288 39-152 (231)
213 PLN02823 spermine synthase 96.1 0.075 1.6E-06 48.8 11.0 96 183-286 103-219 (336)
214 PRK14103 trans-aconitate 2-met 96.1 0.098 2.1E-06 46.2 11.6 98 175-286 21-125 (255)
215 cd01065 NAD_bind_Shikimate_DH 96.1 0.065 1.4E-06 43.2 9.6 103 175-289 9-118 (155)
216 PLN02366 spermidine synthase 96.0 0.076 1.6E-06 48.1 10.7 100 181-287 89-206 (308)
217 cd05311 NAD_bind_2_malic_enz N 96.0 0.16 3.5E-06 43.9 12.3 91 182-287 23-128 (226)
218 TIGR00417 speE spermidine synt 96.0 0.065 1.4E-06 47.8 10.2 99 182-287 71-186 (270)
219 PF03435 Saccharop_dh: Sacchar 96.0 0.051 1.1E-06 51.2 10.0 95 187-286 1-97 (386)
220 PLN02233 ubiquinone biosynthes 96.0 0.09 2E-06 46.6 10.9 105 177-290 67-185 (261)
221 PRK06057 short chain dehydroge 96.0 0.078 1.7E-06 46.6 10.5 81 183-266 6-89 (255)
222 PRK06139 short chain dehydroge 96.0 0.079 1.7E-06 48.7 10.7 81 183-266 6-94 (330)
223 PRK13940 glutamyl-tRNA reducta 96.0 0.063 1.4E-06 50.8 10.1 75 182-268 179-254 (414)
224 PRK11036 putative S-adenosyl-L 96.0 0.05 1.1E-06 48.1 9.0 95 182-286 43-148 (255)
225 PRK08267 short chain dehydroge 95.9 0.16 3.5E-06 44.7 12.2 80 185-266 2-87 (260)
226 PLN02244 tocopherol O-methyltr 95.9 0.12 2.6E-06 47.8 11.5 96 182-287 117-223 (340)
227 PRK01683 trans-aconitate 2-met 95.9 0.13 2.8E-06 45.4 11.4 99 176-286 24-129 (258)
228 PRK07060 short chain dehydroge 95.9 0.084 1.8E-06 46.0 10.1 78 183-266 8-87 (245)
229 TIGR01809 Shik-DH-AROM shikima 95.9 0.04 8.7E-07 49.4 8.0 76 183-267 124-201 (282)
230 PRK03612 spermidine synthase; 95.8 0.062 1.4E-06 52.6 9.8 98 182-287 296-415 (521)
231 PRK12939 short chain dehydroge 95.8 0.24 5.2E-06 43.2 12.8 82 183-266 6-94 (250)
232 PF13241 NAD_binding_7: Putati 95.8 0.1 2.2E-06 39.0 8.8 90 183-291 6-95 (103)
233 PRK06949 short chain dehydroge 95.8 0.11 2.5E-06 45.6 10.7 82 183-266 8-96 (258)
234 PRK08265 short chain dehydroge 95.8 0.29 6.2E-06 43.2 13.3 81 183-266 5-90 (261)
235 PTZ00098 phosphoethanolamine N 95.8 0.12 2.5E-06 45.9 10.7 106 174-288 43-157 (263)
236 KOG1252 Cystathionine beta-syn 95.8 0.27 5.8E-06 44.2 12.5 56 177-233 96-155 (362)
237 PF01209 Ubie_methyltran: ubiE 95.8 0.031 6.7E-07 48.6 6.8 107 177-292 41-158 (233)
238 PRK14903 16S rRNA methyltransf 95.8 0.23 5E-06 47.4 13.2 101 178-286 232-365 (431)
239 TIGR03215 ac_ald_DH_ac acetald 95.8 0.14 3E-06 45.7 11.0 88 186-285 3-93 (285)
240 PRK05872 short chain dehydroge 95.7 0.1 2.3E-06 47.1 10.4 81 183-266 8-95 (296)
241 COG0169 AroE Shikimate 5-dehyd 95.7 0.041 8.9E-07 49.0 7.4 45 182-226 124-168 (283)
242 PRK06719 precorrin-2 dehydroge 95.7 0.33 7.2E-06 39.3 12.2 86 183-284 12-97 (157)
243 PRK08300 acetaldehyde dehydrog 95.7 0.13 2.9E-06 46.1 10.6 92 185-286 5-100 (302)
244 PRK07806 short chain dehydroge 95.7 0.37 8E-06 42.0 13.6 103 183-288 5-135 (248)
245 TIGR03325 BphB_TodD cis-2,3-di 95.7 0.11 2.3E-06 46.0 10.1 80 183-265 4-88 (262)
246 COG0031 CysK Cysteine synthase 95.7 0.4 8.7E-06 42.9 13.4 61 174-234 52-114 (300)
247 TIGR01470 cysG_Nterm siroheme 95.7 0.39 8.5E-06 40.8 13.0 93 183-288 8-101 (205)
248 PLN02781 Probable caffeoyl-CoA 95.7 0.19 4.1E-06 43.7 11.3 105 179-286 64-177 (234)
249 TIGR00477 tehB tellurite resis 95.6 0.07 1.5E-06 45.0 8.3 95 179-286 26-132 (195)
250 COG3288 PntA NAD/NADP transhyd 95.6 0.089 1.9E-06 46.6 8.8 131 182-313 162-310 (356)
251 COG4122 Predicted O-methyltran 95.6 0.35 7.7E-06 41.3 12.3 103 179-286 55-165 (219)
252 PRK07109 short chain dehydroge 95.6 0.34 7.3E-06 44.6 13.4 81 183-266 7-95 (334)
253 PRK07831 short chain dehydroge 95.6 0.14 3.1E-06 45.2 10.5 84 181-266 14-107 (262)
254 PRK14901 16S rRNA methyltransf 95.6 0.17 3.8E-06 48.4 11.7 104 178-286 247-383 (434)
255 PLN02476 O-methyltransferase 95.6 0.21 4.6E-06 44.4 11.3 105 179-286 114-227 (278)
256 PRK13255 thiopurine S-methyltr 95.6 0.11 2.3E-06 44.7 9.2 98 179-286 33-154 (218)
257 TIGR00563 rsmB ribosomal RNA s 95.5 0.29 6.3E-06 46.7 13.1 103 177-286 232-367 (426)
258 PRK07574 formate dehydrogenase 95.5 0.29 6.3E-06 45.8 12.6 92 183-290 191-287 (385)
259 cd01075 NAD_bind_Leu_Phe_Val_D 95.5 0.5 1.1E-05 40.0 13.0 46 183-229 27-73 (200)
260 PRK06180 short chain dehydroge 95.5 0.12 2.6E-06 46.1 9.8 80 184-266 4-88 (277)
261 PRK08261 fabG 3-ketoacyl-(acyl 95.5 0.051 1.1E-06 52.3 7.8 93 178-290 28-126 (450)
262 PRK06463 fabG 3-ketoacyl-(acyl 95.5 0.14 3E-06 45.1 10.0 81 183-266 6-89 (255)
263 PRK07814 short chain dehydroge 95.5 0.17 3.6E-06 44.8 10.6 81 183-266 9-97 (263)
264 PRK08217 fabG 3-ketoacyl-(acyl 95.5 0.2 4.4E-06 43.7 11.0 81 183-265 4-91 (253)
265 PRK08177 short chain dehydroge 95.4 0.13 2.8E-06 44.3 9.5 78 185-266 2-81 (225)
266 cd01483 E1_enzyme_family Super 95.4 0.34 7.4E-06 38.5 11.2 32 186-217 1-32 (143)
267 PRK06200 2,3-dihydroxy-2,3-dih 95.4 0.13 2.9E-06 45.4 9.7 82 183-266 5-90 (263)
268 PRK00121 trmB tRNA (guanine-N( 95.4 0.19 4.2E-06 42.6 10.1 98 183-286 40-155 (202)
269 PRK09186 flagellin modificatio 95.4 0.44 9.5E-06 41.7 12.8 80 183-265 3-92 (256)
270 PRK08644 thiamine biosynthesis 95.4 0.27 5.9E-06 42.0 11.0 34 184-217 28-61 (212)
271 PLN03139 formate dehydrogenase 95.3 0.32 6.9E-06 45.5 12.2 91 183-289 198-293 (386)
272 PRK07688 thiamine/molybdopteri 95.3 0.25 5.5E-06 45.5 11.4 34 184-217 24-57 (339)
273 cd01487 E1_ThiF_like E1_ThiF_l 95.3 0.23 4.9E-06 41.1 10.1 33 186-218 1-33 (174)
274 PF01596 Methyltransf_3: O-met 95.3 0.13 2.8E-06 43.7 8.8 104 181-287 43-155 (205)
275 PRK05866 short chain dehydroge 95.3 0.22 4.7E-06 45.0 10.9 81 184-266 40-127 (293)
276 PF00670 AdoHcyase_NAD: S-aden 95.3 0.29 6.3E-06 39.6 10.3 92 180-288 19-111 (162)
277 TIGR02355 moeB molybdopterin s 95.3 0.3 6.6E-06 42.6 11.3 34 184-217 24-57 (240)
278 PRK14904 16S rRNA methyltransf 95.3 0.34 7.4E-06 46.6 12.7 100 177-286 244-376 (445)
279 PRK06079 enoyl-(acyl carrier p 95.3 0.17 3.8E-06 44.4 10.0 82 183-266 6-93 (252)
280 PRK07774 short chain dehydroge 95.3 0.17 3.7E-06 44.2 9.9 82 183-266 5-93 (250)
281 PRK12475 thiamine/molybdopteri 95.3 0.3 6.4E-06 45.0 11.7 35 184-218 24-58 (338)
282 PRK06841 short chain dehydroge 95.3 0.17 3.7E-06 44.4 9.9 82 183-266 14-99 (255)
283 PRK14902 16S rRNA methyltransf 95.2 0.41 8.9E-06 46.0 13.1 101 178-286 245-378 (444)
284 PF01408 GFO_IDH_MocA: Oxidore 95.2 0.34 7.4E-06 37.0 10.4 86 186-284 2-90 (120)
285 PRK06718 precorrin-2 dehydroge 95.2 0.68 1.5E-05 39.2 12.9 93 183-290 9-103 (202)
286 PRK09072 short chain dehydroge 95.2 0.18 3.8E-06 44.6 9.8 81 183-266 4-90 (263)
287 PRK08339 short chain dehydroge 95.2 0.17 3.8E-06 44.7 9.8 81 183-266 7-95 (263)
288 PRK06505 enoyl-(acyl carrier p 95.2 0.22 4.8E-06 44.3 10.4 81 183-266 6-95 (271)
289 PRK08703 short chain dehydroge 95.1 0.22 4.7E-06 43.3 10.1 83 183-266 5-97 (239)
290 PRK07677 short chain dehydroge 95.1 0.22 4.8E-06 43.6 10.2 81 184-266 1-88 (252)
291 PRK06398 aldose dehydrogenase; 95.1 0.13 2.9E-06 45.3 8.7 76 183-266 5-82 (258)
292 PRK12829 short chain dehydroge 95.1 0.19 4.1E-06 44.2 9.8 84 182-267 9-97 (264)
293 PRK10901 16S rRNA methyltransf 95.1 0.49 1.1E-05 45.2 13.0 102 177-286 238-371 (427)
294 PRK05597 molybdopterin biosynt 95.1 0.28 6.1E-06 45.5 11.1 35 184-218 28-62 (355)
295 PRK06484 short chain dehydroge 95.1 0.59 1.3E-05 45.9 14.0 104 183-289 268-402 (520)
296 PRK07533 enoyl-(acyl carrier p 95.1 0.25 5.4E-06 43.6 10.4 82 183-266 9-98 (258)
297 PF02254 TrkA_N: TrkA-N domain 95.1 0.72 1.6E-05 34.9 11.7 92 187-286 1-95 (116)
298 PRK08628 short chain dehydroge 95.0 0.18 3.9E-06 44.3 9.4 82 183-266 6-93 (258)
299 PRK15116 sulfur acceptor prote 95.0 0.79 1.7E-05 40.6 13.1 35 183-217 29-63 (268)
300 PRK06953 short chain dehydroge 95.0 0.18 3.8E-06 43.3 9.1 77 185-266 2-80 (222)
301 PRK07832 short chain dehydroge 95.0 0.69 1.5E-05 41.0 13.2 78 186-266 2-88 (272)
302 PRK08328 hypothetical protein; 95.0 0.31 6.8E-06 42.3 10.5 33 184-216 27-59 (231)
303 PRK08862 short chain dehydroge 95.0 0.28 6E-06 42.4 10.1 81 183-265 4-92 (227)
304 PRK08589 short chain dehydroge 94.9 0.23 4.9E-06 44.2 9.8 81 183-266 5-92 (272)
305 TIGR01318 gltD_gamma_fam gluta 94.9 0.15 3.2E-06 49.4 9.1 77 183-267 140-237 (467)
306 TIGR01532 E4PD_g-proteo D-eryt 94.9 0.27 5.8E-06 44.9 10.2 102 186-289 1-122 (325)
307 PRK07340 ornithine cyclodeamin 94.9 0.37 8.1E-06 43.7 11.2 102 182-296 123-227 (304)
308 TIGR02354 thiF_fam2 thiamine b 94.9 0.54 1.2E-05 39.8 11.4 34 184-217 21-54 (200)
309 PRK06483 dihydromonapterin red 94.9 0.29 6.3E-06 42.4 10.1 80 184-266 2-84 (236)
310 TIGR01832 kduD 2-deoxy-D-gluco 94.9 0.4 8.7E-06 41.8 11.1 82 183-266 4-90 (248)
311 PRK13243 glyoxylate reductase; 94.9 0.54 1.2E-05 43.3 12.2 90 183-290 149-243 (333)
312 PRK07904 short chain dehydroge 94.9 0.3 6.4E-06 43.0 10.2 83 181-266 5-97 (253)
313 PRK07825 short chain dehydroge 94.8 0.27 5.8E-06 43.7 10.0 80 184-266 5-88 (273)
314 PRK05867 short chain dehydroge 94.8 0.31 6.8E-06 42.7 10.4 81 183-266 8-96 (253)
315 PF00899 ThiF: ThiF family; I 94.8 0.22 4.7E-06 39.2 8.3 92 184-282 2-118 (135)
316 PF01113 DapB_N: Dihydrodipico 94.8 0.41 9E-06 37.0 9.7 94 186-290 2-100 (124)
317 COG0373 HemA Glutamyl-tRNA red 94.8 0.24 5.2E-06 46.4 9.6 72 183-267 177-249 (414)
318 cd00755 YgdL_like Family of ac 94.8 0.46 1E-05 41.2 10.8 34 184-217 11-44 (231)
319 PRK06128 oxidoreductase; Provi 94.8 0.92 2E-05 41.0 13.5 103 183-288 54-192 (300)
320 PRK07024 short chain dehydroge 94.7 0.28 6.1E-06 43.1 9.8 81 184-266 2-88 (257)
321 PTZ00146 fibrillarin; Provisio 94.7 0.45 9.7E-06 42.5 10.8 106 174-285 123-235 (293)
322 PRK06198 short chain dehydroge 94.7 0.37 8E-06 42.3 10.6 82 183-266 5-94 (260)
323 PRK12550 shikimate 5-dehydroge 94.7 0.16 3.4E-06 45.2 8.1 77 173-266 111-188 (272)
324 KOG0725 Reductases with broad 94.7 0.24 5.2E-06 44.1 9.2 83 183-267 7-100 (270)
325 PRK05690 molybdopterin biosynt 94.7 0.45 9.7E-06 41.7 10.7 33 184-216 32-64 (245)
326 PRK15469 ghrA bifunctional gly 94.7 0.6 1.3E-05 42.5 11.9 90 183-290 135-229 (312)
327 PRK00216 ubiE ubiquinone/menaq 94.7 0.62 1.3E-05 40.3 11.8 104 177-288 45-159 (239)
328 PRK11188 rrmJ 23S rRNA methylt 94.7 0.61 1.3E-05 39.8 11.3 100 178-286 45-164 (209)
329 PRK06500 short chain dehydroge 94.7 0.42 9E-06 41.6 10.7 82 183-266 5-90 (249)
330 PRK07231 fabG 3-ketoacyl-(acyl 94.7 0.32 6.9E-06 42.4 9.9 82 183-266 4-91 (251)
331 PRK13656 trans-2-enoyl-CoA red 94.7 0.71 1.5E-05 43.0 12.2 83 182-267 39-142 (398)
332 PRK08642 fabG 3-ketoacyl-(acyl 94.6 0.3 6.4E-06 42.7 9.7 81 184-265 5-90 (253)
333 PF03807 F420_oxidored: NADP o 94.6 1.2 2.5E-05 32.5 11.5 85 186-286 1-93 (96)
334 PRK06172 short chain dehydroge 94.6 0.31 6.8E-06 42.6 9.8 82 183-266 6-94 (253)
335 cd00757 ThiF_MoeB_HesA_family 94.6 0.63 1.4E-05 40.3 11.4 33 184-216 21-53 (228)
336 PRK12809 putative oxidoreducta 94.6 0.19 4.2E-06 50.6 9.3 77 183-267 309-406 (639)
337 PRK07062 short chain dehydroge 94.6 0.37 8E-06 42.5 10.2 82 183-266 7-97 (265)
338 cd01078 NAD_bind_H4MPT_DH NADP 94.6 0.58 1.3E-05 39.3 10.9 76 183-267 27-108 (194)
339 COG1052 LdhA Lactate dehydroge 94.6 1 2.2E-05 41.2 13.0 90 183-290 145-239 (324)
340 PRK06196 oxidoreductase; Provi 94.6 0.31 6.8E-06 44.4 9.9 81 183-266 25-109 (315)
341 PRK12749 quinate/shikimate deh 94.6 0.32 7E-06 43.7 9.7 45 174-218 113-158 (288)
342 PF01564 Spermine_synth: Sperm 94.5 0.14 3E-06 45.0 7.0 98 182-287 75-191 (246)
343 PRK07890 short chain dehydroge 94.5 0.34 7.4E-06 42.5 9.7 81 183-266 4-92 (258)
344 PLN02253 xanthoxin dehydrogena 94.5 0.35 7.6E-06 43.1 9.9 80 184-266 18-104 (280)
345 PRK12747 short chain dehydroge 94.5 1.1 2.4E-05 39.1 12.9 105 183-289 3-146 (252)
346 PLN02780 ketoreductase/ oxidor 94.4 0.36 7.7E-06 44.2 10.0 41 183-224 52-93 (320)
347 PRK06603 enoyl-(acyl carrier p 94.4 0.43 9.4E-06 42.1 10.3 81 183-266 7-96 (260)
348 PRK08594 enoyl-(acyl carrier p 94.4 1 2.2E-05 39.6 12.6 80 183-265 6-96 (257)
349 PRK12937 short chain dehydroge 94.4 1.2 2.6E-05 38.5 13.0 104 183-288 4-140 (245)
350 PRK05884 short chain dehydroge 94.4 0.32 6.9E-06 41.9 9.1 74 186-265 2-78 (223)
351 PRK08762 molybdopterin biosynt 94.4 0.51 1.1E-05 44.3 11.1 35 183-217 134-168 (376)
352 PRK08415 enoyl-(acyl carrier p 94.4 0.51 1.1E-05 42.1 10.6 104 183-289 4-145 (274)
353 KOG1201 Hydroxysteroid 17-beta 94.4 0.32 6.9E-06 43.2 8.9 81 183-266 37-124 (300)
354 PRK11933 yebU rRNA (cytosine-C 94.4 1.1 2.3E-05 43.3 13.3 99 180-286 110-241 (470)
355 PLN02589 caffeoyl-CoA O-methyl 94.4 0.92 2E-05 39.7 11.8 103 180-285 76-188 (247)
356 PLN02490 MPBQ/MSBQ methyltrans 94.3 0.25 5.5E-06 45.3 8.6 104 176-287 105-215 (340)
357 PF03446 NAD_binding_2: NAD bi 94.3 1.1 2.4E-05 36.5 11.7 89 186-290 3-97 (163)
358 COG1712 Predicted dinucleotide 94.3 0.47 1E-05 40.3 9.3 83 186-283 2-87 (255)
359 PRK07478 short chain dehydroge 94.3 0.53 1.1E-05 41.2 10.6 81 184-266 6-93 (254)
360 PRK08643 acetoin reductase; Va 94.3 0.51 1.1E-05 41.4 10.5 80 184-266 2-89 (256)
361 PRK12769 putative oxidoreducta 94.3 0.2 4.4E-06 50.7 8.8 77 183-267 326-423 (654)
362 PRK08690 enoyl-(acyl carrier p 94.3 0.5 1.1E-05 41.8 10.4 81 183-266 5-94 (261)
363 PRK08340 glucose-1-dehydrogena 94.3 0.55 1.2E-05 41.3 10.6 79 186-266 2-86 (259)
364 PRK07576 short chain dehydroge 94.3 0.58 1.2E-05 41.4 10.7 80 183-265 8-95 (264)
365 PF08241 Methyltransf_11: Meth 94.3 0.29 6.3E-06 35.2 7.5 87 189-285 2-95 (95)
366 PRK05717 oxidoreductase; Valid 94.2 0.58 1.3E-05 41.0 10.7 81 183-266 9-94 (255)
367 COG4262 Predicted spermidine s 94.2 0.64 1.4E-05 42.4 10.5 101 181-289 287-409 (508)
368 PRK06125 short chain dehydroge 94.2 0.56 1.2E-05 41.2 10.6 80 183-266 6-91 (259)
369 PRK07523 gluconate 5-dehydroge 94.2 0.57 1.2E-05 41.1 10.6 81 183-266 9-97 (255)
370 PRK07453 protochlorophyllide o 94.2 0.52 1.1E-05 43.1 10.6 80 183-265 5-92 (322)
371 CHL00194 ycf39 Ycf39; Provisio 94.2 0.29 6.3E-06 44.7 8.9 72 186-266 2-74 (317)
372 PLN02396 hexaprenyldihydroxybe 94.2 0.42 9.1E-06 43.7 9.7 95 182-286 130-234 (322)
373 PRK13394 3-hydroxybutyrate deh 94.2 0.64 1.4E-05 40.8 10.8 82 183-266 6-94 (262)
374 KOG1270 Methyltransferases [Co 94.2 0.18 3.8E-06 43.8 6.7 95 184-287 90-195 (282)
375 TIGR00537 hemK_rel_arch HemK-r 94.2 0.34 7.5E-06 40.1 8.5 93 181-287 17-140 (179)
376 PLN02928 oxidoreductase family 94.1 1.1 2.3E-05 41.6 12.4 100 183-289 158-264 (347)
377 PRK10258 biotin biosynthesis p 94.1 0.73 1.6E-05 40.4 11.0 98 177-287 36-140 (251)
378 PRK12743 oxidoreductase; Provi 94.1 0.44 9.6E-06 41.8 9.6 80 184-266 2-90 (256)
379 PRK06194 hypothetical protein; 94.1 0.62 1.3E-05 41.7 10.7 81 184-266 6-93 (287)
380 PRK05134 bifunctional 3-demeth 94.1 0.36 7.9E-06 41.8 8.9 98 179-287 44-151 (233)
381 PF13847 Methyltransf_31: Meth 94.1 0.4 8.6E-06 38.5 8.5 98 182-287 2-110 (152)
382 PRK07454 short chain dehydroge 94.1 0.74 1.6E-05 39.9 10.9 82 183-266 5-93 (241)
383 PRK14175 bifunctional 5,10-met 94.1 0.76 1.6E-05 41.1 10.8 85 174-290 147-233 (286)
384 PRK06701 short chain dehydroge 94.1 1.8 3.9E-05 38.9 13.7 82 183-266 45-134 (290)
385 PRK06138 short chain dehydroge 94.1 0.63 1.4E-05 40.6 10.5 82 183-266 4-91 (252)
386 PF00106 adh_short: short chai 94.0 0.51 1.1E-05 38.2 9.3 80 186-267 2-91 (167)
387 PRK08213 gluconate 5-dehydroge 94.0 0.67 1.5E-05 40.7 10.7 81 183-266 11-99 (259)
388 PRK12823 benD 1,6-dihydroxycyc 94.0 0.56 1.2E-05 41.2 10.1 81 183-266 7-94 (260)
389 PRK12335 tellurite resistance 94.0 0.14 3.1E-06 46.1 6.3 91 183-286 120-222 (287)
390 COG1179 Dinucleotide-utilizing 94.0 0.46 9.9E-06 40.8 8.7 33 184-216 30-62 (263)
391 PRK12481 2-deoxy-D-gluconate 3 94.0 0.74 1.6E-05 40.4 10.8 81 183-266 7-93 (251)
392 PRK05875 short chain dehydroge 94.0 0.67 1.5E-05 41.2 10.7 81 183-266 6-96 (276)
393 PRK06124 gluconate 5-dehydroge 94.0 0.54 1.2E-05 41.2 9.9 81 183-266 10-98 (256)
394 PLN02336 phosphoethanolamine N 94.0 0.23 4.9E-06 48.2 8.1 102 177-287 260-369 (475)
395 PRK10538 malonic semialdehyde 94.0 0.53 1.1E-05 41.1 9.8 78 186-266 2-84 (248)
396 PRK05562 precorrin-2 dehydroge 94.0 2.5 5.5E-05 36.3 13.4 115 183-311 24-141 (223)
397 PRK05854 short chain dehydroge 93.9 0.69 1.5E-05 42.1 10.8 81 183-266 13-103 (313)
398 PF13659 Methyltransf_26: Meth 93.9 0.16 3.5E-06 38.6 5.7 95 184-286 1-114 (117)
399 PRK05653 fabG 3-ketoacyl-(acyl 93.9 0.68 1.5E-05 40.1 10.4 81 183-266 4-92 (246)
400 PRK08264 short chain dehydroge 93.9 0.52 1.1E-05 40.8 9.6 78 183-266 5-83 (238)
401 PRK08159 enoyl-(acyl carrier p 93.9 0.67 1.5E-05 41.3 10.5 82 183-266 9-98 (272)
402 KOG3010 Methyltransferase [Gen 93.9 0.11 2.3E-06 44.5 4.9 102 179-286 28-135 (261)
403 PRK13304 L-aspartate dehydroge 93.9 0.82 1.8E-05 40.6 10.9 86 186-286 3-91 (265)
404 PRK09291 short chain dehydroge 93.9 0.39 8.4E-06 42.1 8.9 77 184-266 2-83 (257)
405 PRK13303 L-aspartate dehydroge 93.9 0.7 1.5E-05 41.0 10.4 88 186-286 3-91 (265)
406 PRK12746 short chain dehydroge 93.9 1.8 4E-05 37.7 13.2 82 184-266 6-100 (254)
407 PRK13302 putative L-aspartate 93.9 0.72 1.6E-05 41.1 10.5 88 185-286 7-97 (271)
408 PRK08263 short chain dehydroge 93.9 0.6 1.3E-05 41.5 10.1 81 184-266 3-87 (275)
409 COG0334 GdhA Glutamate dehydro 93.9 1.1 2.4E-05 41.8 11.7 45 174-219 196-241 (411)
410 TIGR02992 ectoine_eutC ectoine 93.9 1.3 2.8E-05 40.7 12.3 94 182-289 127-226 (326)
411 PRK07074 short chain dehydroge 93.9 0.64 1.4E-05 40.8 10.1 81 184-266 2-87 (257)
412 PF02670 DXP_reductoisom: 1-de 93.8 1.8 3.9E-05 33.7 11.2 95 187-285 1-119 (129)
413 PRK12549 shikimate 5-dehydroge 93.8 0.2 4.2E-06 45.0 6.8 42 183-224 126-167 (284)
414 PTZ00079 NADP-specific glutama 93.8 1.8 3.9E-05 41.2 13.3 34 183-217 236-270 (454)
415 PRK07035 short chain dehydroge 93.8 0.79 1.7E-05 40.0 10.6 80 184-266 8-95 (252)
416 PRK07063 short chain dehydroge 93.8 0.73 1.6E-05 40.5 10.4 81 183-266 6-96 (260)
417 PRK08277 D-mannonate oxidoredu 93.8 0.76 1.6E-05 40.9 10.6 81 183-265 9-96 (278)
418 PRK05600 thiamine biosynthesis 93.8 0.88 1.9E-05 42.5 11.2 34 184-217 41-74 (370)
419 KOG3201 Uncharacterized conser 93.8 0.27 5.8E-06 39.4 6.5 113 171-289 17-142 (201)
420 PRK07985 oxidoreductase; Provi 93.7 1.8 3.9E-05 39.0 13.1 104 183-289 48-187 (294)
421 PRK14968 putative methyltransf 93.7 1 2.2E-05 37.4 10.7 42 181-225 21-62 (188)
422 PRK12384 sorbitol-6-phosphate 93.7 0.75 1.6E-05 40.4 10.4 81 184-266 2-91 (259)
423 PRK06179 short chain dehydroge 93.7 0.36 7.8E-06 42.7 8.4 78 184-266 4-83 (270)
424 PRK07984 enoyl-(acyl carrier p 93.7 0.75 1.6E-05 40.7 10.4 80 183-265 5-93 (262)
425 COG0623 FabI Enoyl-[acyl-carri 93.7 2.1 4.5E-05 36.7 12.1 107 182-290 4-147 (259)
426 PRK06141 ornithine cyclodeamin 93.7 2.3 5E-05 38.8 13.7 97 181-290 122-222 (314)
427 PRK03562 glutathione-regulated 93.7 0.56 1.2E-05 47.1 10.4 93 184-284 400-495 (621)
428 PRK11579 putative oxidoreducta 93.7 2.7 5.9E-05 38.9 14.4 130 185-329 5-142 (346)
429 PRK08226 short chain dehydroge 93.7 0.85 1.8E-05 40.1 10.7 81 183-266 5-92 (263)
430 PRK08085 gluconate 5-dehydroge 93.7 0.85 1.9E-05 39.9 10.6 82 183-266 8-96 (254)
431 PRK11761 cysM cysteine synthas 93.7 2.8 6.1E-05 37.8 14.1 60 175-234 54-115 (296)
432 PRK07878 molybdopterin biosynt 93.7 0.69 1.5E-05 43.6 10.5 34 184-217 42-75 (392)
433 PRK12938 acetyacetyl-CoA reduc 93.7 0.63 1.4E-05 40.5 9.7 81 184-266 3-91 (246)
434 PRK12429 3-hydroxybutyrate deh 93.6 0.86 1.9E-05 39.8 10.6 81 183-266 3-91 (258)
435 PRK06935 2-deoxy-D-gluconate 3 93.6 0.86 1.9E-05 40.0 10.6 82 183-266 14-101 (258)
436 smart00846 Gp_dh_N Glyceraldeh 93.6 0.64 1.4E-05 37.3 8.8 105 186-291 2-122 (149)
437 TIGR03206 benzo_BadH 2-hydroxy 93.6 0.88 1.9E-05 39.6 10.6 82 183-266 2-90 (250)
438 PRK06482 short chain dehydroge 93.6 0.85 1.8E-05 40.5 10.7 79 185-266 3-86 (276)
439 PF07991 IlvN: Acetohydroxy ac 93.6 1.2 2.5E-05 36.1 10.0 88 183-286 3-94 (165)
440 PRK05876 short chain dehydroge 93.6 0.59 1.3E-05 41.7 9.6 81 183-266 5-93 (275)
441 PRK12480 D-lactate dehydrogena 93.6 2 4.3E-05 39.5 13.1 88 183-290 145-237 (330)
442 PLN03013 cysteine synthase 93.6 2.7 5.8E-05 39.9 14.1 57 177-233 167-226 (429)
443 PRK14192 bifunctional 5,10-met 93.6 0.45 9.8E-06 42.6 8.6 84 175-290 149-234 (283)
444 KOG0069 Glyoxylate/hydroxypyru 93.6 1.1 2.4E-05 40.8 11.1 88 183-287 161-253 (336)
445 TIGR00452 methyltransferase, p 93.6 0.96 2.1E-05 41.2 10.8 100 177-286 115-224 (314)
446 cd01492 Aos1_SUMO Ubiquitin ac 93.6 1 2.2E-05 38.0 10.3 92 184-281 21-135 (197)
447 PF03721 UDPG_MGDP_dh_N: UDP-g 93.6 0.79 1.7E-05 38.3 9.6 75 186-267 2-87 (185)
448 PF02558 ApbA: Ketopantoate re 93.6 0.071 1.5E-06 42.8 3.2 94 187-287 1-101 (151)
449 PRK09242 tropinone reductase; 93.5 0.97 2.1E-05 39.6 10.8 81 183-266 8-98 (257)
450 PRK07411 hypothetical protein; 93.5 0.67 1.5E-05 43.6 10.1 34 184-217 38-71 (390)
451 TIGR00091 tRNA (guanine-N(7)-) 93.5 0.87 1.9E-05 38.3 9.9 98 183-286 16-131 (194)
452 PRK06720 hypothetical protein; 93.5 1.5 3.2E-05 36.1 11.0 82 183-266 15-103 (169)
453 PRK07424 bifunctional sterol d 93.5 0.66 1.4E-05 43.9 10.0 38 183-221 177-215 (406)
454 PRK13301 putative L-aspartate 93.5 0.87 1.9E-05 40.0 9.9 88 185-287 3-93 (267)
455 PRK10669 putative cation:proto 93.5 1.2 2.6E-05 44.3 12.3 75 185-267 418-492 (558)
456 TIGR01963 PHB_DH 3-hydroxybuty 93.5 0.62 1.4E-05 40.6 9.4 79 185-266 2-88 (255)
457 PRK13256 thiopurine S-methyltr 93.5 0.91 2E-05 39.1 9.9 100 179-288 39-164 (226)
458 TIGR00872 gnd_rel 6-phosphoglu 93.5 2.1 4.6E-05 38.7 12.9 43 186-229 2-44 (298)
459 KOG4022 Dihydropteridine reduc 93.5 1.1 2.5E-05 35.9 9.6 96 184-288 3-130 (236)
460 PRK08993 2-deoxy-D-gluconate 3 93.4 0.99 2.2E-05 39.5 10.6 82 183-266 9-95 (253)
461 PRK07067 sorbitol dehydrogenas 93.4 0.99 2.2E-05 39.6 10.6 81 184-266 6-90 (257)
462 COG2910 Putative NADH-flavin r 93.4 0.8 1.7E-05 37.7 8.8 94 186-290 2-107 (211)
463 COG0569 TrkA K+ transport syst 93.4 0.96 2.1E-05 39.1 10.1 83 186-277 2-86 (225)
464 PRK14027 quinate/shikimate deh 93.4 0.4 8.6E-06 43.0 8.0 43 183-225 126-168 (283)
465 COG0144 Sun tRNA and rRNA cyto 93.4 1.3 2.8E-05 41.2 11.6 104 177-286 150-287 (355)
466 PRK07417 arogenate dehydrogena 93.4 0.76 1.7E-05 41.1 9.8 87 186-287 2-91 (279)
467 PRK07856 short chain dehydroge 93.4 0.77 1.7E-05 40.2 9.8 78 183-266 5-85 (252)
468 PRK06181 short chain dehydroge 93.3 1.1 2.4E-05 39.3 10.8 80 185-266 2-88 (263)
469 PRK12936 3-ketoacyl-(acyl-carr 93.3 0.86 1.9E-05 39.5 9.9 82 183-266 5-90 (245)
470 PRK06077 fabG 3-ketoacyl-(acyl 93.3 2.9 6.4E-05 36.3 13.4 105 184-289 6-142 (252)
471 PRK06153 hypothetical protein; 93.3 0.38 8.3E-06 44.6 7.7 34 184-217 176-209 (393)
472 PRK06101 short chain dehydroge 93.2 0.66 1.4E-05 40.3 9.1 42 185-227 2-44 (240)
473 PRK07577 short chain dehydroge 93.2 0.54 1.2E-05 40.5 8.5 74 184-266 3-78 (234)
474 PRK06197 short chain dehydroge 93.2 0.92 2E-05 41.1 10.4 82 183-266 15-105 (306)
475 PRK06114 short chain dehydroge 93.2 1.2 2.6E-05 39.0 10.7 82 183-266 7-96 (254)
476 PRK08220 2,3-dihydroxybenzoate 93.2 2.2 4.8E-05 37.1 12.4 77 183-266 7-86 (252)
477 PRK08063 enoyl-(acyl carrier p 93.2 0.99 2.1E-05 39.3 10.2 83 183-266 3-92 (250)
478 PRK09134 short chain dehydroge 93.2 0.83 1.8E-05 40.1 9.7 82 183-266 8-97 (258)
479 PRK05557 fabG 3-ketoacyl-(acyl 93.2 2.9 6.3E-05 36.0 13.2 82 183-266 4-93 (248)
480 PLN02256 arogenate dehydrogena 93.1 1.6 3.5E-05 39.6 11.5 90 182-288 34-128 (304)
481 TIGR00507 aroE shikimate 5-deh 93.1 1.4 3.1E-05 39.2 11.1 96 182-290 115-217 (270)
482 PRK05447 1-deoxy-D-xylulose 5- 93.1 0.94 2E-05 42.1 10.0 97 185-285 2-120 (385)
483 PRK04207 glyceraldehyde-3-phos 93.1 1.2 2.5E-05 41.2 10.8 99 186-288 3-110 (341)
484 PF13561 adh_short_C2: Enoyl-( 93.1 0.69 1.5E-05 40.2 9.0 95 193-289 6-135 (241)
485 PRK08223 hypothetical protein; 93.1 0.92 2E-05 40.5 9.6 34 184-217 27-60 (287)
486 PRK03659 glutathione-regulated 93.1 0.84 1.8E-05 45.7 10.5 93 185-285 401-496 (601)
487 TIGR01934 MenG_MenH_UbiE ubiqu 93.1 1.1 2.4E-05 38.3 10.1 104 177-289 33-145 (223)
488 PRK13403 ketol-acid reductoiso 93.0 1.6 3.4E-05 39.7 11.1 86 183-285 15-104 (335)
489 PF01118 Semialdhyde_dh: Semia 93.0 0.47 1E-05 36.5 6.9 90 186-287 1-97 (121)
490 PF10727 Rossmann-like: Rossma 93.0 0.25 5.4E-06 38.4 5.3 80 184-280 10-91 (127)
491 TIGR01505 tartro_sem_red 2-hyd 93.0 1.2 2.5E-05 40.2 10.6 69 186-270 1-69 (291)
492 PRK07666 fabG 3-ketoacyl-(acyl 93.0 0.89 1.9E-05 39.3 9.5 81 184-266 7-94 (239)
493 PRK07066 3-hydroxybutyryl-CoA 93.0 1.8 3.9E-05 39.6 11.6 38 185-223 8-45 (321)
494 PRK08251 short chain dehydroge 93.0 1.4 2.9E-05 38.4 10.7 79 184-265 2-90 (248)
495 PRK12367 short chain dehydroge 93.0 0.76 1.6E-05 40.3 9.0 74 184-266 14-89 (245)
496 cd02440 AdoMet_MTases S-adenos 93.0 1.2 2.6E-05 32.0 9.0 91 187-286 2-103 (107)
497 TIGR02072 BioC biotin biosynth 93.0 1.3 2.9E-05 38.2 10.6 96 183-287 34-135 (240)
498 PLN00203 glutamyl-tRNA reducta 92.9 0.7 1.5E-05 45.1 9.4 74 184-267 266-340 (519)
499 PRK00258 aroE shikimate 5-dehy 92.9 0.33 7.1E-06 43.5 6.8 95 182-287 121-221 (278)
500 PRK06522 2-dehydropantoate 2-r 92.9 1.5 3.3E-05 39.5 11.3 94 186-286 2-99 (304)
No 1
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.1e-62 Score=421.97 Aligned_cols=346 Identities=50% Similarity=0.888 Sum_probs=314.9
Q ss_pred CcccceEEEEeeCCceEEEEecCCCC-CCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEE
Q 017793 11 DKNQNMAAWLLGIKTLKIQPYHLPTL-GPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEE 89 (366)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~ 89 (366)
|.++|+++|+.++.++++++.|+|++ +|+||+|++.++|||.+|++.++ ..+.+.+..+.|+++|||.+|+|++
T Consensus 1 ~~~~~~A~vl~g~~di~i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~-----~G~ig~~v~k~PmvlGHEssGiV~e 75 (354)
T KOG0024|consen 1 MAADNLALVLRGKGDIRIEQRPIPTITDPDEVLVAIKAVGICGSDVHYYT-----HGRIGDFVVKKPMVLGHESSGIVEE 75 (354)
T ss_pred CCcccceeEEEccCceeEeeCCCCCCCCCCEEEEEeeeEEecCccchhhc-----cCCcCccccccccccccccccchhh
Confidence 35679999999999999999999988 99999999999999999999988 3344555567899999999999999
Q ss_pred eCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccchhh
Q 017793 90 VGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPL 169 (366)
Q Consensus 90 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~~~ 169 (366)
+|+.|+++++||||++-|..+|+.|.+|+.|++++|+.+.|.+.+..+|++++|++.++++|+|+|+++|++++|++.++
T Consensus 76 vG~~Vk~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~atpp~~G~la~y~~~~~dfc~KLPd~vs~eeGAl~ePL 155 (354)
T KOG0024|consen 76 VGDEVKHLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFCATPPVDGTLAEYYVHPADFCYKLPDNVSFEEGALIEPL 155 (354)
T ss_pred hcccccccccCCeEEecCCCccccchhhhCcccccCCccccccCCCcCCceEEEEEechHheeeCCCCCchhhcccccch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHH
Q 017793 170 SVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKI 249 (366)
Q Consensus 170 ~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~ 249 (366)
++++++.+++++++|++|||+|+|++|+.++..||++|+.+|++++..++|++++++||++.+....... . ...++++
T Consensus 156 sV~~HAcr~~~vk~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~~~~~~~~-~-~~~~~~~ 233 (354)
T KOG0024|consen 156 SVGVHACRRAGVKKGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVTDPSSHKS-S-PQELAEL 233 (354)
T ss_pred hhhhhhhhhcCcccCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEEeeccccc-c-HHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999876643322 2 2223322
Q ss_pred H-Hh-hCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeeccCC-ChHHHHHHHHC
Q 017793 250 Q-NA-MGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRS-TWPLCIEFLRS 326 (366)
Q Consensus 250 ~-~~-~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~ 326 (366)
. .. +...+|++|||+|....++.++..++.+|+++++|+.....+++...+..+.+++.|+..+.+ .|..+++++++
T Consensus 234 v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg~g~~~~~fpi~~v~~kE~~~~g~fry~~~~y~~ai~li~s 313 (354)
T KOG0024|consen 234 VEKALGKKQPDVTFDCSGAEVTIRAAIKATRSGGTVVLVGMGAEEIQFPIIDVALKEVDLRGSFRYCNGDYPTAIELVSS 313 (354)
T ss_pred HHhhccccCCCeEEEccCchHHHHHHHHHhccCCEEEEeccCCCccccChhhhhhheeeeeeeeeeccccHHHHHHHHHc
Confidence 2 21 235599999999999899999999999999999999999999999999999999999999955 99999999999
Q ss_pred CCCCCCCceEEEecCChhhHHHHHHHHHcCCC-ceEEEee
Q 017793 327 GKIDVKPLITHRFGFTQKEIEDAFEISAQGGN-AIKVMFN 365 (366)
Q Consensus 327 g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~-~gkvvi~ 365 (366)
|+++.++++++.|++ ++..+||+.+..++. .-|+++.
T Consensus 314 Gki~~k~lIT~r~~~--~~~~eAf~~~~~~~~~~iKv~i~ 351 (354)
T KOG0024|consen 314 GKIDVKPLITHRYKF--DDADEAFETLQHGEEGVIKVIIT 351 (354)
T ss_pred CCcCchhheeccccc--chHHHHHHHHHhCcCCceEEEEe
Confidence 999999999999999 999999999888864 4588775
No 2
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=100.00 E-value=3.1e-62 Score=432.82 Aligned_cols=330 Identities=32% Similarity=0.519 Sum_probs=297.5
Q ss_pred cccceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCcc-CCCCcccccceeEEEEE
Q 017793 12 KNQNMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFI-VKKPMVIGHECAGIIEE 89 (366)
Q Consensus 12 ~~~~~~~~~~~~-~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~-~~~p~i~G~e~~G~V~~ 89 (366)
+++||++++... ++++++++|.|+|+++||+|||+|+|+|++|++.++| ..+ ..+|+|+|||.+|+|++
T Consensus 1 ~~~mkA~~~~~~~~pl~i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G---------~~~~~~~P~ipGHEivG~V~~ 71 (339)
T COG1064 1 MMTMKAAVLKKFGQPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKG---------DWPVPKLPLIPGHEIVGTVVE 71 (339)
T ss_pred CcceEEEEEccCCCCceEEeccCCCCCCCeEEEEEEEEeecchhhhhhcC---------CCCCCCCCccCCcceEEEEEE
Confidence 367999999977 4599999999999999999999999999999999994 333 33799999999999999
Q ss_pred eCCCCCCCCCCCEEEE-cCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-
Q 017793 90 VGSEVKSLEVGDRVAL-EPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE- 167 (366)
Q Consensus 90 vG~~v~~~~~Gd~V~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~- 167 (366)
+|++|++|++||||.+ ....+|++|.||+.|+.++|++..+.++ +.+|+|+||+++++++++++|+++++++||.+.
T Consensus 72 vG~~V~~~k~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~gy-~~~GGyaeyv~v~~~~~~~iP~~~d~~~aApllC 150 (339)
T COG1064 72 VGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGY-TTDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLC 150 (339)
T ss_pred ecCCCccCCCCCEEEecCccCCCCCCccccCcccccCCCccccce-eecCcceeEEEEchHHeEECCCCCChhhhhhhhc
Confidence 9999999999999999 7888999999999999999999877776 589999999999999999999999999999885
Q ss_pred hhHHHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHH
Q 017793 168 PLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVG 247 (366)
Q Consensus 168 ~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~ 247 (366)
...|+|+++++.+++||++|+|.|.|++|++|+|+|+++|+ +|++++++++|.+++++||++.+++.. .+++.+.++
T Consensus 151 aGiT~y~alk~~~~~pG~~V~I~G~GGlGh~avQ~Aka~ga-~Via~~~~~~K~e~a~~lGAd~~i~~~--~~~~~~~~~ 227 (339)
T COG1064 151 AGITTYRALKKANVKPGKWVAVVGAGGLGHMAVQYAKAMGA-EVIAITRSEEKLELAKKLGADHVINSS--DSDALEAVK 227 (339)
T ss_pred CeeeEeeehhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEeCChHHHHHHHHhCCcEEEEcC--CchhhHHhH
Confidence 67789999999999999999999999999999999999998 899999999999999999999998854 345555543
Q ss_pred HHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccC-C-CceeechHhhhcCcEEEEeecc-CCChHHHHHHH
Q 017793 248 KIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK-T-EMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFL 324 (366)
Q Consensus 248 ~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l 324 (366)
+ .+|++||+++ +..++.+++.|+++|+++++|... . ...++...++++++++.|+..+ +.++++++++.
T Consensus 228 ~-------~~d~ii~tv~-~~~~~~~l~~l~~~G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g~~~d~~e~l~f~ 299 (339)
T COG1064 228 E-------IADAIIDTVG-PATLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGTRADLEEALDFA 299 (339)
T ss_pred h-------hCcEEEECCC-hhhHHHHHHHHhcCCEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecCCHHHHHHHHHHH
Confidence 3 2999999999 889999999999999999999874 3 3456677789999999999987 78999999999
Q ss_pred HCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793 325 RSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 366 (366)
Q Consensus 325 ~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~ 366 (366)
.+|++ .|.+.+.+++ +++++|++.|++++..|+.||++
T Consensus 300 ~~g~I--kp~i~e~~~l--~~in~A~~~m~~g~v~gR~Vi~~ 337 (339)
T COG1064 300 AEGKI--KPEILETIPL--DEINEAYERMEKGKVRGRAVIDM 337 (339)
T ss_pred HhCCc--eeeEEeeECH--HHHHHHHHHHHcCCeeeEEEecC
Confidence 99999 6666568889 99999999999999999999864
No 3
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=100.00 E-value=7.4e-55 Score=377.11 Aligned_cols=338 Identities=30% Similarity=0.476 Sum_probs=294.2
Q ss_pred ccceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeC
Q 017793 13 NQNMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVG 91 (366)
Q Consensus 13 ~~~~~~~~~~~-~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG 91 (366)
+++++|++.++ ++++++++.+++|++|||+||+.|+|+|++|....+ +..+..+|.++|||++|+|++||
T Consensus 1 mk~~aAV~~~~~~Pl~i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~---------G~~p~~~P~vLGHEgAGiVe~VG 71 (366)
T COG1062 1 MKTRAAVAREAGKPLEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLS---------GDDPEGFPAVLGHEGAGIVEAVG 71 (366)
T ss_pred CCceEeeeecCCCCeEEEEEecCCCCCCeEEEEEEEeeccccchhhhc---------CCCCCCCceecccccccEEEEec
Confidence 46899999977 799999999999999999999999999999999888 66677799999999999999999
Q ss_pred CCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCC--C----------------C--CCCcceEEEEecCCce
Q 017793 92 SEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGS--P----------------P--TNGSLAHKVVHPAKLC 151 (366)
Q Consensus 92 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----------------~--~~g~~~e~~~~~~~~~ 151 (366)
++|+++++||+|+..+..+||+|..|.++++++|....-... . . -.++|+||.++++..+
T Consensus 72 ~gVt~vkpGDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~ 151 (366)
T COG1062 72 EGVTSVKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISL 151 (366)
T ss_pred CCccccCCCCEEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccchhheeecccce
Confidence 999999999999999999999999999999999995221100 0 1 1259999999999999
Q ss_pred EECCCCCCccccccch-hhHHHHHHH-HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC
Q 017793 152 YKLPDNVSLEEGAMCE-PLSVGVHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA 229 (366)
Q Consensus 152 ~~~P~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~ 229 (366)
+|++++.+++.++++. ...|.+-++ ..+++++|++|.|.|.|++|+++||-|+..|+.+||+++.+++|.+++++||+
T Consensus 152 vki~~~~p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~GlGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~fGA 231 (366)
T COG1062 152 VKIDPDAPLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGA 231 (366)
T ss_pred EECCCCCCccceEEEeeeeccChHHhhhcccCCCCCeEEEEeccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHhcCC
Confidence 9999999999999886 566677765 66999999999999999999999999999999999999999999999999999
Q ss_pred ceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHh-hhcCcEEE
Q 017793 230 DETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPA-AAREVDVI 308 (366)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~~ 308 (366)
.++++.... .+..+.+.++. ++|+|++|||+|....+++++.++.++|+.+.+|.......++...+ +....++.
T Consensus 232 T~~vn~~~~-~~vv~~i~~~T---~gG~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~~~~i~~~~~~lv~gr~~~ 307 (366)
T COG1062 232 THFVNPKEV-DDVVEAIVELT---DGGADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGAGQEISTRPFQLVTGRVWK 307 (366)
T ss_pred ceeecchhh-hhHHHHHHHhc---CCCCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCCCceeecChHHeeccceEE
Confidence 999874322 25666666554 67999999999999999999999999999999998877666665553 23337888
Q ss_pred Eeecc----CCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793 309 GIFRY----RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 366 (366)
Q Consensus 309 ~~~~~----~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~ 366 (366)
|++.+ +.++..+++|+.+|++.+++++++.++| ++++|||+.+.+|+.. |-||++
T Consensus 308 Gs~~G~~~p~~diP~lv~~y~~Gkl~~d~lvt~~~~L--e~INeaf~~m~~G~~I-R~Vi~~ 366 (366)
T COG1062 308 GSAFGGARPRSDIPRLVDLYMAGKLPLDRLVTHTIPL--EDINEAFDLMHEGKSI-RSVIRF 366 (366)
T ss_pred EEeecCCccccchhHHHHHHHcCCCchhHHhhccccH--HHHHHHHHHHhCCcee-eEEecC
Confidence 88765 7789999999999999999999999999 9999999999999765 666653
No 4
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=100.00 E-value=6.5e-53 Score=389.96 Aligned_cols=336 Identities=30% Similarity=0.566 Sum_probs=290.0
Q ss_pred cceEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCC
Q 017793 14 QNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE 93 (366)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~ 93 (366)
.++++++.++..+++++.|.| ++++||||||.++|||++|++++.+.. .+.....+|.++|||++|+|+++ +
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~-----~~~~~~~~p~v~GhE~~G~V~~v--~ 75 (343)
T PRK09880 4 KTQSCVVAGKKDVAVTEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGK-----VGNFVIKAPMVLGHEVIGKIVHS--D 75 (343)
T ss_pred cceEEEEecCCceEEEecCCC-CCCCeEEEEEEEEEECccccHhhccCC-----cccccccCCcccCcccEEEEEEe--c
Confidence 478999999999999999997 689999999999999999998775211 11122457999999999999999 7
Q ss_pred CCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCC----CCCCcceEEEEecCCceEECCCCCCccccccchhh
Q 017793 94 VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSP----PTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPL 169 (366)
Q Consensus 94 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~~~ 169 (366)
+++|++||||++.+..+|++|.+|..+++++|++..+++.. ..+|+|+||++++++.++++|+++++++++...++
T Consensus 76 v~~~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa~~~~~ 155 (343)
T PRK09880 76 SSGLKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFFGSAMYFPHVDGGFTRYKVVDTAQCIPYPEKADEKVMAFAEPL 155 (343)
T ss_pred CccCCCCCEEEECCCCCCcCChhhcCCChhhCCCcceeecccccCCCCCceeeeEEechHHeEECCCCCCHHHHHhhcHH
Confidence 88999999999999999999999999999999997766531 24799999999999999999999999887767788
Q ss_pred HHHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHH
Q 017793 170 SVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKI 249 (366)
Q Consensus 170 ~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~ 249 (366)
++||+++++....++++|||+|+|++|++++|+|+.+|+++|+++++++++.++++++|++.++++.. .++.+ +
T Consensus 156 ~~a~~al~~~~~~~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~--~~~~~----~ 229 (343)
T PRK09880 156 AVAIHAAHQAGDLQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVNPQN--DDLDH----Y 229 (343)
T ss_pred HHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEecCCc--ccHHH----H
Confidence 89999998777778999999999999999999999999977899999999999999999999887643 23322 2
Q ss_pred HHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeeccCCChHHHHHHHHCCCC
Q 017793 250 QNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKI 329 (366)
Q Consensus 250 ~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~ 329 (366)
... .+++|++|||+|++..+..++++++++|+++.+|.......++...+..+++++.+++...++++++++++++|++
T Consensus 230 ~~~-~g~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~l~~~g~i 308 (343)
T PRK09880 230 KAE-KGYFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGGAPPEFPMMTLIVKEISLKGSFRFTEEFNTAVSWLANGVI 308 (343)
T ss_pred hcc-CCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCHHHHHhCCcEEEEEeeccccHHHHHHHHHcCCC
Confidence 221 2469999999998778899999999999999999765545566667778899999988777889999999999999
Q ss_pred CCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793 330 DVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 366 (366)
Q Consensus 330 ~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~ 366 (366)
.+.+.++++|++ +++++|++.+.++...||+++.+
T Consensus 309 ~~~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvvl~~ 343 (343)
T PRK09880 309 NPLPLLSAEYPF--TDLEEALIFAGDKTQAAKVQLVF 343 (343)
T ss_pred CchhheEEEEEH--HHHHHHHHHHhcCCCceEEEEeC
Confidence 877889999999 99999999999988889999864
No 5
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=100.00 E-value=1.1e-50 Score=375.03 Aligned_cols=335 Identities=33% Similarity=0.591 Sum_probs=287.8
Q ss_pred ceEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCCC
Q 017793 15 NMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEV 94 (366)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v 94 (366)
||++++.+++.++++++|.|+|+++||+||+.++|+|++|++.+.+... .+..+|.++|||++|+|+++|+++
T Consensus 1 mka~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~-------~~~~~p~i~G~e~~G~V~~vG~~v 73 (339)
T cd08239 1 MRGAVFPGDRTVELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHR-------APAYQGVIPGHEPAGVVVAVGPGV 73 (339)
T ss_pred CeEEEEecCCceEEEecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCC-------ccCCCCceeccCceEEEEEECCCC
Confidence 6888998888999999999999999999999999999999988763210 012357899999999999999999
Q ss_pred CCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccc-cCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhHHH
Q 017793 95 KSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRF-FGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVG 172 (366)
Q Consensus 95 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~~a 172 (366)
++|++||+|++.+..+|++|.+|+.++.++|++... ++ ....|+|+||+.++.+.++++|+++++++|+.+. ++.+|
T Consensus 74 ~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~g-~~~~G~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta 152 (339)
T cd08239 74 THFRVGDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYG-WNRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTA 152 (339)
T ss_pred ccCCCCCEEEECCCCCCCCChhhhCcCcccCcCcccccc-cCCCCcceeEEEechHHeEECCCCCCHHHhhhhcchHHHH
Confidence 999999999999999999999999999999998654 22 2457999999999999999999999999998875 78899
Q ss_pred HHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHh
Q 017793 173 VHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNA 252 (366)
Q Consensus 173 ~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~ 252 (366)
|++++..++++|++|||+|+|++|++++|+|+.+|++.|+++++++++.++++++|++.++++.. .+ .+.+.++.
T Consensus 153 ~~~l~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~--~~-~~~~~~~~-- 227 (339)
T cd08239 153 YHALRRVGVSGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQ--DD-VQEIRELT-- 227 (339)
T ss_pred HHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCc--ch-HHHHHHHh--
Confidence 99998888999999999999999999999999999965888999999999999999998887643 23 44444433
Q ss_pred hCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceee-chHhhhcCcEEEEeecc-CCChHHHHHHHHCCCCC
Q 017793 253 MGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVA-LTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKID 330 (366)
Q Consensus 253 ~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~ 330 (366)
.+.++|++|||+|+...+..++++|+++|+++.+|..... .+. ...+..+++++.+++.. .++++++++++.+|.+.
T Consensus 228 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~i~ 306 (339)
T cd08239 228 SGAGADVAIECSGNTAARRLALEAVRPWGRLVLVGEGGEL-TIEVSNDLIRKQRTLIGSWYFSVPDMEECAEFLARHKLE 306 (339)
T ss_pred CCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcCCCCc-ccCcHHHHHhCCCEEEEEecCCHHHHHHHHHHHHcCCCC
Confidence 2458999999999887778899999999999999865432 222 23467788999998876 46899999999999998
Q ss_pred CCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793 331 VKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 366 (366)
Q Consensus 331 ~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~ 366 (366)
+.+.++++|++ +++++|++.++++. .||+|+++
T Consensus 307 ~~~~i~~~~~l--~~~~~a~~~~~~~~-~gKvvi~~ 339 (339)
T cd08239 307 VDRLVTHRFGL--DQAPEAYALFAQGE-SGKVVFVF 339 (339)
T ss_pred hhHeEEEEecH--HHHHHHHHHHHcCC-ceEEEEeC
Confidence 88889999999 99999999998875 79999975
No 6
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=100.00 E-value=1.5e-50 Score=377.93 Aligned_cols=334 Identities=32% Similarity=0.502 Sum_probs=285.8
Q ss_pred ceEEEEee---------CCceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeE
Q 017793 15 NMAAWLLG---------IKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAG 85 (366)
Q Consensus 15 ~~~~~~~~---------~~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G 85 (366)
|||+++.+ ++.++++++|.|+|+++||+|||.++|||++|++++.| ..+..+|.++|||++|
T Consensus 1 mka~~~~~~g~~~~~~~~~~l~~~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g---------~~~~~~p~i~GhE~~G 71 (371)
T cd08281 1 MRAAVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVING---------DRPRPLPMALGHEAAG 71 (371)
T ss_pred CcceEEEecccccccccCCCceEEEeecCCCCCCeEEEEEEEEeeCccchHhhcC---------CCCCCCCccCCcccee
Confidence 67888884 35689999999999999999999999999999998884 2234568999999999
Q ss_pred EEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCC--------------------CCCCcceEEEE
Q 017793 86 IIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSP--------------------PTNGSLAHKVV 145 (366)
Q Consensus 86 ~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~g~~~e~~~ 145 (366)
+|+++|+++++|++||||++.+..+|++|.+|+.|++++|++....... ...|+|+||+.
T Consensus 72 ~V~~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~aey~~ 151 (371)
T cd08281 72 VVVEVGEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAV 151 (371)
T ss_pred EEEEeCCCCCcCCCCCEEEEccCCCCCCCccccCCCcccccCccccccccccccCcccccccCcccccccCcccceeeEE
Confidence 9999999999999999999988889999999999999999875322100 01379999999
Q ss_pred ecCCceEECCCCCCccccccch-hhHHHHHHH-HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHH
Q 017793 146 HPAKLCYKLPDNVSLEEGAMCE-PLSVGVHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSI 223 (366)
Q Consensus 146 ~~~~~~~~~P~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~ 223 (366)
++++.++++|+++++++|+.+. .+.+||+++ +..++++|++|||+|+|++|++++|+|+..|++.|++++++++|.++
T Consensus 152 v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~ 231 (371)
T cd08281 152 VSRRSVVKIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLAL 231 (371)
T ss_pred ecccceEECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHH
Confidence 9999999999999999998876 678889887 56889999999999999999999999999999778999999999999
Q ss_pred HHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCC--CceeechHhh
Q 017793 224 ARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT--EMTVALTPAA 301 (366)
Q Consensus 224 ~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~ 301 (366)
++++|++.++++.+ +++.+.++++. ++++|++|||+|....+..++++++++|+++.+|.... ...++...++
T Consensus 232 a~~~Ga~~~i~~~~--~~~~~~i~~~~---~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~ 306 (371)
T cd08281 232 ARELGATATVNAGD--PNAVEQVRELT---GGGVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPEARLSVPALSLV 306 (371)
T ss_pred HHHcCCceEeCCCc--hhHHHHHHHHh---CCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCCCceeeecHHHHh
Confidence 99999998877533 45666665553 34899999999988789999999999999999997543 2345555678
Q ss_pred hcCcEEEEeecc----CCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEe
Q 017793 302 AREVDVIGIFRY----RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF 364 (366)
Q Consensus 302 ~~~~~~~~~~~~----~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi 364 (366)
.+++++.+++.. .++++++++++.+|++.+.+.++++|+| +++++|++.+.+++..+|+|+
T Consensus 307 ~~~~~i~g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l--~~~~~A~~~~~~~~~~~~vi~ 371 (371)
T cd08281 307 AEERTLKGSYMGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPL--DEINEGFDRLAAGEAVRQVIL 371 (371)
T ss_pred hcCCEEEEEecCCCChHHHHHHHHHHHHcCCCCchhheeeeecH--HHHHHHHHHHhCCCceeeeeC
Confidence 899999998764 4678899999999999888889999999 999999999999988888764
No 7
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3e-51 Score=350.65 Aligned_cols=335 Identities=25% Similarity=0.424 Sum_probs=284.2
Q ss_pred CcccceEEEEeeC-C--ceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCcc-CCCCcccccceeEE
Q 017793 11 DKNQNMAAWLLGI-K--TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFI-VKKPMVIGHECAGI 86 (366)
Q Consensus 11 ~~~~~~~~~~~~~-~--~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~-~~~p~i~G~e~~G~ 86 (366)
.|+++++..+..+ + ++++.+++.|+|+++||+||++|+|||++|++.+.| ... ..+|.|+|||.+|+
T Consensus 6 ~p~k~~g~~~~~~~G~l~p~~~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~g---------dwg~s~~PlV~GHEiaG~ 76 (360)
T KOG0023|consen 6 IPEKQFGWAARDPSGVLSPEVFSFPVREPGENDVLVKIEYCGVCHSDLHAWKG---------DWGLSKYPLVPGHEIAGV 76 (360)
T ss_pred CchhhEEEEEECCCCCCCcceeEcCCCCCCCCcEEEEEEEEeccchhHHHhhc---------cCCcccCCccCCceeeEE
Confidence 4666777777755 3 678899999999999999999999999999999983 222 67899999999999
Q ss_pred EEEeCCCCCCCCCCCEEEEcC-CcCCCCCccccCCCCCCCCCcccc--C----CCCCCCcceEEEEecCCceEECCCCCC
Q 017793 87 IEEVGSEVKSLEVGDRVALEP-GISCGHCSLCKAGSYNLCPEMRFF--G----SPPTNGSLAHKVVHPAKLCYKLPDNVS 159 (366)
Q Consensus 87 V~~vG~~v~~~~~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~g~~~e~~~~~~~~~~~~P~~~~ 159 (366)
|+++|++|++|++||||.+-. ..+|+.|.+|..+...+||++-+. + +..++|+|++|+++++.+++++|++++
T Consensus 77 VvkvGs~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~~a~kIP~~~p 156 (360)
T KOG0023|consen 77 VVKVGSNVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDEVFAIKIPENLP 156 (360)
T ss_pred EEEECCCcccccccCeeeeeEEeccccCccccccCCcccCCceeEeccccccCCCCccCccceeEEEeeeeEEECCCCCC
Confidence 999999999999999999854 468999999999999999953332 2 234567799999999999999999999
Q ss_pred ccccccch-hhHHHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCCh-hHHHHHHHcCCceeeecCC
Q 017793 160 LEEGAMCE-PLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV-QRLSIARNLGADETAKVST 237 (366)
Q Consensus 160 ~~~aa~~~-~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~-~~~~~~~~lg~~~~~~~~~ 237 (366)
.++||.+. ..-|+|..+++.+++||+++.|.|+|++|.+++|+||++|. +|+++++++ +|.+.++.||+|..++..
T Consensus 157 l~~aAPlLCaGITvYspLk~~g~~pG~~vgI~GlGGLGh~aVq~AKAMG~-rV~vis~~~~kkeea~~~LGAd~fv~~~- 234 (360)
T KOG0023|consen 157 LASAAPLLCAGITVYSPLKRSGLGPGKWVGIVGLGGLGHMAVQYAKAMGM-RVTVISTSSKKKEEAIKSLGADVFVDST- 234 (360)
T ss_pred hhhccchhhcceEEeehhHHcCCCCCcEEEEecCcccchHHHHHHHHhCc-EEEEEeCCchhHHHHHHhcCcceeEEec-
Confidence 99999876 45578889999999999999999987799999999999999 788888777 777888889999988753
Q ss_pred CCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeecc-CCC
Q 017793 238 DIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RST 316 (366)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 316 (366)
.++++.+.+.+. ...++|-|.+. ..-.+..+++.|+.+|+++++|.+.....++...+.++.+.+.|+..+ +.+
T Consensus 235 ~d~d~~~~~~~~---~dg~~~~v~~~--a~~~~~~~~~~lk~~Gt~V~vg~p~~~~~~~~~~lil~~~~I~GS~vG~~ke 309 (360)
T KOG0023|consen 235 EDPDIMKAIMKT---TDGGIDTVSNL--AEHALEPLLGLLKVNGTLVLVGLPEKPLKLDTFPLILGRKSIKGSIVGSRKE 309 (360)
T ss_pred CCHHHHHHHHHh---hcCcceeeeec--cccchHHHHHHhhcCCEEEEEeCcCCcccccchhhhcccEEEEeeccccHHH
Confidence 245555554433 35566666554 344688899999999999999998887788888999999999999877 889
Q ss_pred hHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793 317 WPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 366 (366)
Q Consensus 317 ~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~ 366 (366)
.++++++..++.+ +..+ +..++ +++++|+++++++....|.|+++
T Consensus 310 t~E~Ldf~a~~~i--k~~I-E~v~~--~~v~~a~erm~kgdV~yRfVvD~ 354 (360)
T KOG0023|consen 310 TQEALDFVARGLI--KSPI-ELVKL--SEVNEAYERMEKGDVRYRFVVDV 354 (360)
T ss_pred HHHHHHHHHcCCC--cCce-EEEeh--hHHHHHHHHHHhcCeeEEEEEEc
Confidence 9999999999999 5555 67788 99999999999999999998864
No 8
>PLN02740 Alcohol dehydrogenase-like
Probab=100.00 E-value=9.8e-50 Score=373.46 Aligned_cols=343 Identities=26% Similarity=0.425 Sum_probs=286.7
Q ss_pred CcccceEEEEeeCC-ceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEE
Q 017793 11 DKNQNMAAWLLGIK-TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEE 89 (366)
Q Consensus 11 ~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~ 89 (366)
.+.+||++++.++. ++.++++|.|+|+++||+|||.++|||++|++.+.|... ....+|.++|||++|+|++
T Consensus 7 ~~~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~-------~~~~~p~i~GhE~~G~V~~ 79 (381)
T PLN02740 7 KVITCKAAVAWGPGEPLVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENE-------AQRAYPRILGHEAAGIVES 79 (381)
T ss_pred cceeeEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCc-------ccCCCCccccccceEEEEE
Confidence 56789999999885 689999999999999999999999999999998884320 1234689999999999999
Q ss_pred eCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCC-----------------------CCCCCcceEEEEe
Q 017793 90 VGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGS-----------------------PPTNGSLAHKVVH 146 (366)
Q Consensus 90 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~g~~~e~~~~ 146 (366)
+|+++++|++||||++.+..+|+.|.+|..+.++.|+++...+. ....|+|+||+++
T Consensus 80 vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v 159 (381)
T PLN02740 80 VGEGVEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVL 159 (381)
T ss_pred eCCCCCcCCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEE
Confidence 99999999999999999999999999999999999998653211 0126999999999
Q ss_pred cCCceEECCCCCCccccccch-hhHHHHHHH-HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH
Q 017793 147 PAKLCYKLPDNVSLEEGAMCE-PLSVGVHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA 224 (366)
Q Consensus 147 ~~~~~~~~P~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~ 224 (366)
+.+.++++|+++++++++.+. .+.+||+++ +.+++++|++|||+|+|++|++++|+|+.+|+.+|++++++++|.+++
T Consensus 160 ~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a 239 (381)
T PLN02740 160 DSACVVKIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKG 239 (381)
T ss_pred ehHHeEECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHCCCCcEEEEcCChHHHHHH
Confidence 999999999999999988775 678888876 568899999999999999999999999999996799999999999999
Q ss_pred HHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCC-ceEEEEcccCCCceeechHh-hh
Q 017793 225 RNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTVALTPA-AA 302 (366)
Q Consensus 225 ~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~-~~ 302 (366)
+++|++.++++.....++.+.+.++. ++++|++||++|++..+..++.+++++ |+++.+|.......++.... +.
T Consensus 240 ~~~Ga~~~i~~~~~~~~~~~~v~~~~---~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~~ 316 (381)
T PLN02740 240 KEMGITDFINPKDSDKPVHERIREMT---GGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMELF 316 (381)
T ss_pred HHcCCcEEEecccccchHHHHHHHHh---CCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHHHh
Confidence 99999988876443334666665553 338999999999888899999999996 99999997654322332222 34
Q ss_pred cCcEEEEeecc----CCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793 303 REVDVIGIFRY----RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 366 (366)
Q Consensus 303 ~~~~~~~~~~~----~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~ 366 (366)
++.++.|++.+ ...++++++++.++.+.+.+.++++|+| +++++|++.+.+++. .|++|++
T Consensus 317 ~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l--~e~~~A~~~~~~~~~-~k~~~~~ 381 (381)
T PLN02740 317 DGRSITGSVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPF--EKINEAFQLLEDGKA-LRCLLHL 381 (381)
T ss_pred cCCeEEEEecCCCCcHHHHHHHHHHHHcCCCChHHheeEEecH--HHHHHHHHHHHCCCc-eeEEEeC
Confidence 67888887653 2468899999999999888889999999 999999999988865 5999864
No 9
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=100.00 E-value=1.1e-49 Score=370.39 Aligned_cols=337 Identities=26% Similarity=0.443 Sum_probs=284.7
Q ss_pred cceEEEEeeCC-ceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCC
Q 017793 14 QNMAAWLLGIK-TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGS 92 (366)
Q Consensus 14 ~~~~~~~~~~~-~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~ 92 (366)
+||++++++++ +++++++|.|.|+++||+|||.++|+|++|++...| .....+|.++|||++|+|+++|+
T Consensus 1 ~mka~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g---------~~~~~~p~i~G~e~~G~V~~vG~ 71 (358)
T TIGR03451 1 TVRGVIARSKGAPVELETIVVPDPGPGEVIVDIQACGVCHTDLHYREG---------GINDEFPFLLGHEAAGVVEAVGE 71 (358)
T ss_pred CcEEEEEccCCCCCEEEEEECCCCCCCeEEEEEEEEeecHHHHHHhcC---------CccccCCcccccceEEEEEEeCC
Confidence 58999999874 689999999999999999999999999999998873 22335689999999999999999
Q ss_pred CCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccc--------CC----CCCCCcceEEEEecCCceEECCCCCCc
Q 017793 93 EVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF--------GS----PPTNGSLAHKVVHPAKLCYKLPDNVSL 160 (366)
Q Consensus 93 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~----~~~~g~~~e~~~~~~~~~~~~P~~~~~ 160 (366)
++++|++||+|++.+..+|+.|.+|..+++++|++.... +. ....|+|+||+.++++.++++|+++++
T Consensus 72 ~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~ 151 (358)
T TIGR03451 72 GVTDVAPGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTLVHAGQCTKVDPAADP 151 (358)
T ss_pred CCcccCCCCEEEEccCCCCCCChHHhCcCcccCcCccccccccccccCcccccccccccccceEEEehhheEECCCCCCh
Confidence 999999999999999999999999999999999863211 00 013599999999999999999999999
Q ss_pred cccccch-hhHHHHHHH-HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCC
Q 017793 161 EEGAMCE-PLSVGVHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTD 238 (366)
Q Consensus 161 ~~aa~~~-~~~~a~~~l-~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~ 238 (366)
++|+.+. .+.+||.++ +..++++|++|||+|+|++|++++|+|+..|+.+|++++++++|.++++++|++.++++..
T Consensus 152 ~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~~- 230 (358)
T TIGR03451 152 AAAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSG- 230 (358)
T ss_pred hHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcCCC-
Confidence 9888775 567778776 4578999999999999999999999999999977999999999999999999998887543
Q ss_pred CcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCC--ceeechHhhhcCcEEEEeecc---
Q 017793 239 IEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE--MTVALTPAAAREVDVIGIFRY--- 313 (366)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~--- 313 (366)
+++.+.+.++. .+.++|++|||+|++..+..++++++++|+++.+|..... ..++...++.++.++.+++..
T Consensus 231 -~~~~~~i~~~~--~~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 307 (358)
T TIGR03451 231 -TDPVEAIRALT--GGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWYGDCL 307 (358)
T ss_pred -cCHHHHHHHHh--CCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCceeeccHHHHhhcCCEEEEeecCCCC
Confidence 45656555543 3568999999999877899999999999999999976432 234444567788888887643
Q ss_pred -CCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793 314 -RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 366 (366)
Q Consensus 314 -~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~ 366 (366)
.+.++++++++++|++.+.+.++++|++ +++++|++.+.+++.. |+++++
T Consensus 308 ~~~~~~~~~~l~~~g~l~~~~~i~~~~~l--~~~~~A~~~~~~~~~~-k~~~~~ 358 (358)
T TIGR03451 308 PERDFPMLVDLYLQGRLPLDAFVTERIGL--DDVEEAFDKMHAGDVL-RSVVEL 358 (358)
T ss_pred cHHHHHHHHHHHHcCCCCchheEEEEecH--HHHHHHHHHHhCCCcc-eeEEeC
Confidence 4578899999999999877789999999 9999999999988665 877753
No 10
>PLN02827 Alcohol dehydrogenase-like
Probab=100.00 E-value=1.9e-49 Score=370.52 Aligned_cols=336 Identities=24% Similarity=0.412 Sum_probs=282.7
Q ss_pred cceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCC
Q 017793 14 QNMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGS 92 (366)
Q Consensus 14 ~~~~~~~~~~-~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~ 92 (366)
.||++++.++ +.++++++|.|+|+++||+|||.++|||++|++.+.+ . ..+|.++|||++|+|+++|+
T Consensus 12 ~mka~~~~~~~~~~~~~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g---------~--~~~p~i~GhE~~G~V~~vG~ 80 (378)
T PLN02827 12 TCRAAVAWGAGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWES---------Q--ALFPRIFGHEASGIVESIGE 80 (378)
T ss_pred eeEEEEEecCCCCceEEEeecCCCCCCEEEEEEEEEecChhHHHHhcC---------C--CCCCeeecccceEEEEEcCC
Confidence 4788888876 4799999999999999999999999999999988772 1 14688999999999999999
Q ss_pred CCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccC----------------C----CCCCCcceEEEEecCCceE
Q 017793 93 EVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFG----------------S----PPTNGSLAHKVVHPAKLCY 152 (366)
Q Consensus 93 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~----~~~~g~~~e~~~~~~~~~~ 152 (366)
++++|++||+|++.+..+|+.|.+|+.+++++|+++.... . ...+|+|+||+.++++.++
T Consensus 81 ~v~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~ 160 (378)
T PLN02827 81 GVTEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAV 160 (378)
T ss_pred CCcccCCCCEEEEecCCCCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEechhheE
Confidence 9999999999999988899999999999999999854311 0 0124899999999999999
Q ss_pred ECCCCCCccccccch-hhHHHHHHH-HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCc
Q 017793 153 KLPDNVSLEEGAMCE-PLSVGVHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD 230 (366)
Q Consensus 153 ~~P~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~ 230 (366)
++|+++++++++.+. .+.++|+++ +.+++++|++|||+|+|++|++++|+|+.+|+..|+++++++++.++++++|++
T Consensus 161 ~iP~~l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~lGa~ 240 (378)
T PLN02827 161 KVDPLAPLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVT 240 (378)
T ss_pred ECCCCCCHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCc
Confidence 999999998888765 566778765 457899999999999999999999999999997788888899999999999999
Q ss_pred eeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCC-ceEEEEcccCCCceeec-hHhhhcCcEEE
Q 017793 231 ETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTVAL-TPAAAREVDVI 308 (366)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~-~~~~~~~~~~~ 308 (366)
.++++.....++.+.+.++. ++++|++||++|....+..+++.++++ |+++.+|.......+.. ..++.+++++.
T Consensus 241 ~~i~~~~~~~~~~~~v~~~~---~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~ 317 (378)
T PLN02827 241 DFINPNDLSEPIQQVIKRMT---GGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAKPEVSAHYGLFLSGRTLK 317 (378)
T ss_pred EEEcccccchHHHHHHHHHh---CCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCCccccccHHHHhcCceEE
Confidence 88876542235555555543 348999999999877889999999998 99999997654333333 34677899999
Q ss_pred Eeecc----CCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793 309 GIFRY----RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 366 (366)
Q Consensus 309 ~~~~~----~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~ 366 (366)
|++.. ..+++++++++++|++.+.+.++++|+| +++++|++.+.+++. +|+||.+
T Consensus 318 g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~l--e~~~~A~~~~~~~~~-~k~vi~~ 376 (378)
T PLN02827 318 GSLFGGWKPKSDLPSLVDKYMNKEIMIDEFITHNLSF--DEINKAFELMREGKC-LRCVIHM 376 (378)
T ss_pred eeecCCCchhhhHHHHHHHHHcCCCChHHheEEEecH--HHHHHHHHHHHCCCc-eEEEEEe
Confidence 88654 3478899999999999776689999999 999999999998866 6999864
No 11
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=100.00 E-value=1e-48 Score=362.85 Aligned_cols=335 Identities=28% Similarity=0.500 Sum_probs=284.2
Q ss_pred ceEEEEeeCCceEEEEecCCCC-CCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCC
Q 017793 15 NMAAWLLGIKTLKIQPYHLPTL-GPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE 93 (366)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~p~~-~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~ 93 (366)
||++++.++..+++++.|.|+| +++||+|||.++|+|++|++..... + ...+|.++|||++|+|+++|++
T Consensus 1 Mka~~~~~~~~~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~-------~--~~~~p~i~G~e~~G~V~~vG~~ 71 (347)
T PRK10309 1 MKSVVNDTDGIVRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKN-------G--AHYYPITLGHEFSGYVEAVGSG 71 (347)
T ss_pred CceEEEeCCCceEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCC-------C--CCCCCcccccceEEEEEEeCCC
Confidence 6788888888899999999997 6999999999999999999754310 1 1235789999999999999999
Q ss_pred CCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccchhhHHHH
Q 017793 94 VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGV 173 (366)
Q Consensus 94 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~~~~~a~ 173 (366)
+++|++||+|++.+..+|+.|.+|..|..+.|+.+.+++. ...|+|+||+.++++.++++|+++++++|+.+.++++++
T Consensus 72 v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~-~~~G~~aey~~v~~~~~~~lP~~~s~~~aa~~~~~~~~~ 150 (347)
T PRK10309 72 VDDLHPGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGS-RRDGGNAEYIVVKRKNLFALPTDMPIEDGAFIEPITVGL 150 (347)
T ss_pred CCCCCCCCEEEECCCcCCCCCcchhCcCcccCCCcceecc-CCCCccceeEEeehHHeEECcCCCCHHHhhhhhHHHHHH
Confidence 9999999999999999999999999999999998766553 358999999999999999999999999998876667788
Q ss_pred HHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhh
Q 017793 174 HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM 253 (366)
Q Consensus 174 ~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (366)
++++...++++++|||+|+|++|++++|+|+.+|++.|+++++++++.++++++|++.++++.. .+ ...+.++. .
T Consensus 151 ~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~--~~-~~~~~~~~--~ 225 (347)
T PRK10309 151 HAFHLAQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSRE--MS-APQIQSVL--R 225 (347)
T ss_pred HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecCcc--cC-HHHHHHHh--c
Confidence 8877788899999999999999999999999999976888989999999999999998877543 22 23343332 2
Q ss_pred CCCCc-EEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceee---chHhhhcCcEEEEeecc------CCChHHHHHH
Q 017793 254 GSGID-VSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVA---LTPAAAREVDVIGIFRY------RSTWPLCIEF 323 (366)
Q Consensus 254 ~~~~d-~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~---~~~~~~~~~~~~~~~~~------~~~~~~~~~~ 323 (366)
+.++| ++|||+|+...+..+++.++++|+++.+|.......++ ...+..+++++.+++.+ ..++++++++
T Consensus 226 ~~~~d~~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~ 305 (347)
T PRK10309 226 ELRFDQLILETAGVPQTVELAIEIAGPRAQLALVGTLHHDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRL 305 (347)
T ss_pred CCCCCeEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCcccChhhhhHHhhcCcEEEEEeccccCCcchhHHHHHHHH
Confidence 55788 99999998888999999999999999999665432222 23466788999987653 2568899999
Q ss_pred HHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793 324 LRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 366 (366)
Q Consensus 324 l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~ 366 (366)
+++|.+.+++.+++.|+| +++++|++.+.+++..||+|+++
T Consensus 306 ~~~g~i~~~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvvv~~ 346 (347)
T PRK10309 306 LTERKLSLEPLIAHRGSF--ESFAQAVRDLAGNPMPGKVLLQI 346 (347)
T ss_pred HHcCCCCchhheEEEeeH--HHHHHHHHHHhcCCcceEEEEeC
Confidence 999999888899999999 99999999999998889999874
No 12
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=100.00 E-value=5.6e-49 Score=361.87 Aligned_cols=337 Identities=36% Similarity=0.631 Sum_probs=278.4
Q ss_pred ceEEEEeeCC-ceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCc-ccccceeEEEEEeCC
Q 017793 15 NMAAWLLGIK-TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPM-VIGHECAGIIEEVGS 92 (366)
Q Consensus 15 ~~~~~~~~~~-~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~-i~G~e~~G~V~~vG~ 92 (366)
|+++++..+. ...+++.+.|.++|++|+|||.++|||.+|++++.|. ......|. ++|||++|+|+++|
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~--------~~~~~~~~~i~GHE~~G~V~evG- 71 (350)
T COG1063 1 MKAAVVYVGGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGG--------EPFVPPGDIILGHEFVGEVVEVG- 71 (350)
T ss_pred CceeEEEecCCccccccCCCCCCCCCeEEEEEEEEeEchhhhhhccCC--------CCCCCCCCcccCccceEEEEEec-
Confidence 5777777664 4447787777789999999999999999999999932 11223344 99999999999999
Q ss_pred CCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCC----CCCCcceEEEEecCCceEEC-CCCCCccccccch
Q 017793 93 EVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSP----PTNGSLAHKVVHPAKLCYKL-PDNVSLEEGAMCE 167 (366)
Q Consensus 93 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~g~~~e~~~~~~~~~~~~-P~~~~~~~aa~~~ 167 (366)
.++.|++||||++.|..+||+|.+|+.|.++.|++..+++.. ..+|+|+||+++|.++++++ |++++.+.|+...
T Consensus 72 ~~~~~~~GdrVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~~~G~~aEyv~vp~~~~~~~~pd~~~~~~aal~e 151 (350)
T COG1063 72 VVRGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDGGFAEYVRVPADFNLAKLPDGIDEEAAALTE 151 (350)
T ss_pred cccCCCCCCEEEECCCcCCCCChhHhCcCcccCCCccccccccccCCCCCceEEEEEeccccCeecCCCCCChhhhhhcC
Confidence 778899999999999999999999999999999977666542 25799999999997666555 7777878888888
Q ss_pred hhHHHHHHH-HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCceeeecCCCCcchHHH
Q 017793 168 PLSVGVHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-LGADETAKVSTDIEDVDTD 245 (366)
Q Consensus 168 ~~~~a~~~l-~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~ 245 (366)
++++++++. .....+++++|+|+|+|++|++++++++..|+.+|++++.+++|++++++ .+++.+.+... ++....
T Consensus 152 pla~~~~~~a~~~~~~~~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~--~~~~~~ 229 (350)
T COG1063 152 PLATAYHGHAERAAVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSE--DDAGAE 229 (350)
T ss_pred hhhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCcc--ccHHHH
Confidence 999998874 44445666699999999999999999999999999999999999999999 55655544222 233333
Q ss_pred HHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCc-eeechHhhhcCcEEEEeec-c-CCChHHHHH
Q 017793 246 VGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEM-TVALTPAAAREVDVIGIFR-Y-RSTWPLCIE 322 (366)
Q Consensus 246 ~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~ 322 (366)
+.++ +.+.++|++|||+|....+..+++.++++|+++.+|...... .++...++.+++++.|++. . ...++.+++
T Consensus 230 ~~~~--t~g~g~D~vie~~G~~~~~~~ai~~~r~gG~v~~vGv~~~~~~~~~~~~~~~kel~l~gs~~~~~~~~~~~~~~ 307 (350)
T COG1063 230 ILEL--TGGRGADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGGEDIPLPAGLVVSKELTLRGSLRPSGREDFERALD 307 (350)
T ss_pred HHHH--hCCCCCCEEEECCCCHHHHHHHHHHhcCCCEEEEEeccCCccCccCHHHHHhcccEEEeccCCCCcccHHHHHH
Confidence 3333 235689999999999888999999999999999999887665 5667788999999999965 3 568999999
Q ss_pred HHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCC-ceEEEeeC
Q 017793 323 FLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGN-AIKVMFNL 366 (366)
Q Consensus 323 ~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~-~gkvvi~~ 366 (366)
++.+|++.+.+.+++.+++ +++++|++.+.+.+. ..|+++++
T Consensus 308 ll~~g~i~~~~lit~~~~~--~~~~~a~~~~~~~~~~~~Kv~i~~ 350 (350)
T COG1063 308 LLASGKIDPEKLITHRLPL--DDAAEAYELFADRKEEAIKVVLKP 350 (350)
T ss_pred HHHcCCCChhHceEeeccH--HHHHHHHHHHHhcCCCeEEEEecC
Confidence 9999999999999999888 999999999998644 66998864
No 13
>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.4e-49 Score=337.19 Aligned_cols=340 Identities=27% Similarity=0.431 Sum_probs=293.5
Q ss_pred ccceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeC
Q 017793 13 NQNMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVG 91 (366)
Q Consensus 13 ~~~~~~~~~~~-~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG 91 (366)
=+.|||+.-.+ .+|.++|+.+++|+.+||.||+.+.++|++|...++|+. ....+|.|+|||++|+|+.+|
T Consensus 6 I~CKAAV~w~a~~PL~IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~--------~~~~fP~IlGHEaaGIVESvG 77 (375)
T KOG0022|consen 6 ITCKAAVAWEAGKPLVIEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKD--------PEGLFPVILGHEAAGIVESVG 77 (375)
T ss_pred eEEeEeeeccCCCCeeEEEEEeCCCCCceEEEEEEEEeeccccceeecCCC--------ccccCceEecccceeEEEEec
Confidence 45789999877 799999999999999999999999999999999999542 235679999999999999999
Q ss_pred CCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCC---------------------CCCCcceEEEEecCCc
Q 017793 92 SEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSP---------------------PTNGSLAHKVVHPAKL 150 (366)
Q Consensus 92 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~g~~~e~~~~~~~~ 150 (366)
++|+++++||+|+..+...|++|.+|.++..++|..+...... ....+|+||.+++...
T Consensus 78 egV~~vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~ 157 (375)
T KOG0022|consen 78 EGVTTVKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDIS 157 (375)
T ss_pred CCccccCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEeecce
Confidence 9999999999999999999999999999999999886554310 0124999999999999
Q ss_pred eEECCCCCCccccccch-hhHHHHHHH-HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcC
Q 017793 151 CYKLPDNVSLEEGAMCE-PLSVGVHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLG 228 (366)
Q Consensus 151 ~~~~P~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg 228 (366)
++++++..+++.++++. ..+|+|.+. +.++++||+++.|+|-|++|++++|-||+.|+.+||++|-+++|.+.+++||
T Consensus 158 v~kId~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGLG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~fG 237 (375)
T KOG0022|consen 158 VAKIDPSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGLGGVGLAVAMGAKAAGASRIIGVDINPDKFEKAKEFG 237 (375)
T ss_pred eEecCCCCChhheeEeeccccccchhhhhhcccCCCCEEEEEecchHHHHHHHhHHhcCcccEEEEecCHHHHHHHHhcC
Confidence 99999999999999886 688888775 6799999999999999999999999999999999999999999999999999
Q ss_pred CceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCC-ceEEEEcccCCCceeechHh-hhcCcE
Q 017793 229 ADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTVALTPA-AAREVD 306 (366)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~-~~~~~~ 306 (366)
+.+.+|.........+.++++ +++|+|+.|||+|....+.+++.+...+ |+-+.+|.......+....+ +.+...
T Consensus 238 aTe~iNp~d~~~~i~evi~Em---TdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~~GR~ 314 (375)
T KOG0022|consen 238 ATEFINPKDLKKPIQEVIIEM---TDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLVTGRT 314 (375)
T ss_pred cceecChhhccccHHHHHHHH---hcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhccccE
Confidence 999988642222355555555 4789999999999999999999999998 99999997776655555543 344555
Q ss_pred EEEee----ccCCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793 307 VIGIF----RYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 366 (366)
Q Consensus 307 ~~~~~----~~~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~ 366 (366)
+.|+. ..+.++..+++.+.++++.++..+++.++| +++++||++|.+|+.. |.|+.+
T Consensus 315 ~~Gs~FGG~K~~~~iP~lV~~y~~~~l~ld~~ITh~l~f--~~In~AF~ll~~Gksi-R~vl~~ 375 (375)
T KOG0022|consen 315 WKGSAFGGFKSKSDIPKLVKDYMKKKLNLDEFITHELPF--EEINKAFDLLHEGKSI-RCVLWM 375 (375)
T ss_pred EEEEecccccchhhhhHHHHHHHhCccchhhhhhcccCH--HHHHHHHHHHhCCceE-EEEEeC
Confidence 55443 337789999999999999999999999999 9999999999999776 777754
No 14
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=100.00 E-value=1.1e-48 Score=364.74 Aligned_cols=337 Identities=28% Similarity=0.434 Sum_probs=277.9
Q ss_pred ceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCC
Q 017793 15 NMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE 93 (366)
Q Consensus 15 ~~~~~~~~~-~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~ 93 (366)
|+++++..+ ..++++++|.|+|+++||+|||.++|+|++|+++..|.+ ....+|.++|||++|+|+++|++
T Consensus 2 ~~a~~~~~~~~~l~~~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~--------~~~~~p~i~GhE~~G~V~~vG~~ 73 (368)
T TIGR02818 2 SRAAVAWAAGQPLKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGAD--------PEGVFPVILGHEGAGIVEAVGEG 73 (368)
T ss_pred ceEEEEecCCCCeEEEEecCCCCCCCeEEEEEEEecccHHHHHHhcCCC--------CCCCCCeeeccccEEEEEEECCC
Confidence 678877765 579999999999999999999999999999999887431 01346899999999999999999
Q ss_pred CCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccc---CCC-----------------CCCCcceEEEEecCCceEE
Q 017793 94 VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF---GSP-----------------PTNGSLAHKVVHPAKLCYK 153 (366)
Q Consensus 94 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-----------------~~~g~~~e~~~~~~~~~~~ 153 (366)
+++|++||||++.+..+|++|.+|+.+++++|+++... +.. ...|+|+||++++.+.+++
T Consensus 74 v~~~~~GdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~ 153 (368)
T TIGR02818 74 VTSVKVGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAK 153 (368)
T ss_pred CccCCCCCEEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccCccceeeEEechhheEE
Confidence 99999999999988889999999999999999975311 100 0247999999999999999
Q ss_pred CCCCCCccccccch-hhHHHHHHH-HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCce
Q 017793 154 LPDNVSLEEGAMCE-PLSVGVHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE 231 (366)
Q Consensus 154 ~P~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~ 231 (366)
+|+++++++++.+. ++.+||+++ +.+++++|++|||+|+|++|++++|+|+.+|+.+|++++.++++.++++++|++.
T Consensus 154 lP~~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~Ga~~ 233 (368)
T TIGR02818 154 INPAAPLEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATD 233 (368)
T ss_pred CCCCCCHHHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCe
Confidence 99999999998876 788899987 5688999999999999999999999999999977999999999999999999998
Q ss_pred eeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCC-ceEEEEcccCCC--ceeechHhhhcCcEEE
Q 017793 232 TAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTE--MTVALTPAAAREVDVI 308 (366)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~~~ 308 (366)
++++.+...++.+.+.++. ++++|++|||+|++..+..++++++++ |+++.+|..... ..+....+. ....+.
T Consensus 234 ~i~~~~~~~~~~~~v~~~~---~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~ 309 (368)
T TIGR02818 234 CVNPNDYDKPIQEVIVEIT---DGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLV-TGRVWR 309 (368)
T ss_pred EEcccccchhHHHHHHHHh---CCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHh-ccceEE
Confidence 8876532344555555543 348999999999877889999999886 999999975422 122222222 234456
Q ss_pred Eeecc----CCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793 309 GIFRY----RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 366 (366)
Q Consensus 309 ~~~~~----~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~ 366 (366)
++... ..++.++++++.++++.+++.+++.|+| +++++|++.+++++. +|++|.+
T Consensus 310 g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l--~~~~~A~~~~~~~~~-~k~~v~~ 368 (368)
T TIGR02818 310 GSAFGGVKGRTELPGIVEQYMKGEIALDDFVTHTMPL--EDINEAFDLMHEGKS-IRTVIHY 368 (368)
T ss_pred EeeccCCCcHHHHHHHHHHHHCCCCCchhheeEEecH--HHHHHHHHHHhCCCc-eeEEeeC
Confidence 65432 3468899999999999888889999999 999999999988754 7999874
No 15
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=100.00 E-value=6.4e-49 Score=367.62 Aligned_cols=337 Identities=24% Similarity=0.428 Sum_probs=269.7
Q ss_pred cceEEEEeeCCceEEEEecCCCCC-------CCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEE
Q 017793 14 QNMAAWLLGIKTLKIQPYHLPTLG-------PQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGI 86 (366)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~p~~~-------~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~ 86 (366)
-||++++.+++.++++++|.|+|+ +|||||||.++|||++|++++.| .....+|.++|||++|+
T Consensus 2 ~mka~v~~~~~~~~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g---------~~~~~~p~i~GhE~~G~ 72 (393)
T TIGR02819 2 GNRGVVYLGPGKVEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRG---------RTTAPTGLVLGHEITGE 72 (393)
T ss_pred CceEEEEecCCceeEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCC---------CCCCCCCccccceeEEE
Confidence 378899988888999999999874 68999999999999999998883 22345689999999999
Q ss_pred EEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcc------ccCCC---CCCCcceEEEEecCC--ceEECC
Q 017793 87 IEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMR------FFGSP---PTNGSLAHKVVHPAK--LCYKLP 155 (366)
Q Consensus 87 V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~---~~~g~~~e~~~~~~~--~~~~~P 155 (366)
|+++|++|++|++||||.+.+..+|+.|.+|+.|++++|++.. +++.. ..+|+|+||++++.. .++++|
T Consensus 73 V~~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~l~~vP 152 (393)
T TIGR02819 73 VIEKGRDVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMGGWVGGQSEYVMVPYADFNLLKFP 152 (393)
T ss_pred EEEEcCccccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccCCCCCceEEEEEechhhCceEECC
Confidence 9999999999999999999999999999999999999999753 12211 247999999999964 799999
Q ss_pred CCCCc----cccccc-hhhHHHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCc
Q 017793 156 DNVSL----EEGAMC-EPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD 230 (366)
Q Consensus 156 ~~~~~----~~aa~~-~~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~ 230 (366)
++++. .+++.+ .++.++|+++++.+++++++|||.|+|++|++++|+|+.+|+..+++++.+++|.++++++|++
T Consensus 153 ~~~~~~~~~~~~a~l~~~~~ta~~a~~~~~~~~g~~VlV~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a~~~Ga~ 232 (393)
T TIGR02819 153 DRDQALEKIRDLTMLSDIFPTGYHGAVTAGVGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQARSFGCE 232 (393)
T ss_pred CcccccccccceeeeccHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHcCCe
Confidence 98753 233333 4788999999888899999999999999999999999999997777778888999999999997
Q ss_pred eeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCCh--------------HHHHHHHHhhcCCceEEEEcccC-CCc-e
Q 017793 231 ETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFD--------------KTMSTALNATRPGGKVCLIGLAK-TEM-T 294 (366)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~--------------~~~~~~~~~l~~~G~~v~~g~~~-~~~-~ 294 (366)
. +++. ...++.+.+.++. .+.++|++||++|.+ ..++.+++.++++|+++.+|.+. ... .
T Consensus 233 ~-v~~~-~~~~~~~~v~~~~--~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~G~~~~~~~~~ 308 (393)
T TIGR02819 233 T-VDLS-KDATLPEQIEQIL--GEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGIPGLYVTEDPGA 308 (393)
T ss_pred E-EecC-CcccHHHHHHHHc--CCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEEeeecCCccccc
Confidence 4 4432 2235555555543 356899999999985 37999999999999999999753 111 1
Q ss_pred -----------eechHhhhcCcEEEEeeccC-CChHHHHHHHHCCCCCCCCceE-EEecCChhhHHHHHHHHHcCCCceE
Q 017793 295 -----------VALTPAAAREVDVIGIFRYR-STWPLCIEFLRSGKIDVKPLIT-HRFGFTQKEIEDAFEISAQGGNAIK 361 (366)
Q Consensus 295 -----------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~g~~~~~~~~~-~~~~l~~~~~~~a~~~~~~~~~~gk 361 (366)
+.....+.+..++.+..... +.+.++++++.+|++++.++++ ++|+| +++++|++.+.+++ .+|
T Consensus 309 ~~~~~~~~~~~i~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l--~~~~~a~~~~~~~~-~~K 385 (393)
T TIGR02819 309 VDAAAKTGSLSIRFGLGWAKSHSFHTGQTPVMKYNRNLMQAILHDRVQIAKAVNVTVISL--DDAPEGYAEFDAGA-AKK 385 (393)
T ss_pred ccccccccccccchHHhhccCceEEeccCChhhhHHHHHHHHHcCCCCHHHceecceecH--HHHHHHHHHHhhCC-ceE
Confidence 11222344556666543332 3347899999999998777777 68999 99999999999874 489
Q ss_pred EEeeC
Q 017793 362 VMFNL 366 (366)
Q Consensus 362 vvi~~ 366 (366)
++|.+
T Consensus 386 vvi~~ 390 (393)
T TIGR02819 386 FVIDP 390 (393)
T ss_pred EEEeC
Confidence 99863
No 16
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=100.00 E-value=3.2e-48 Score=362.30 Aligned_cols=337 Identities=26% Similarity=0.423 Sum_probs=281.1
Q ss_pred cceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCC
Q 017793 14 QNMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGS 92 (366)
Q Consensus 14 ~~~~~~~~~~-~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~ 92 (366)
+||++++..+ ..++++++|.|+|+++||+|||.++|||++|++.+.|.. ....+|.++|||++|+|+++|+
T Consensus 2 ~~ka~~~~~~~~~~~l~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~--------~~~~~p~i~G~e~~G~V~~vG~ 73 (369)
T cd08301 2 TCKAAVAWEAGKPLVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKG--------QTPLFPRILGHEAAGIVESVGE 73 (369)
T ss_pred ccEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCC--------CCCCCCcccccccceEEEEeCC
Confidence 6899998866 579999999999999999999999999999999888431 1235689999999999999999
Q ss_pred CCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccc---CCC------------------CCCCcceEEEEecCCce
Q 017793 93 EVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF---GSP------------------PTNGSLAHKVVHPAKLC 151 (366)
Q Consensus 93 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~------------------~~~g~~~e~~~~~~~~~ 151 (366)
++++|++||||++.+..+|++|.+|..++++.|+.+.+. +.. ...|+|+||++++.+.+
T Consensus 74 ~v~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~ 153 (369)
T cd08301 74 GVTDLKPGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCV 153 (369)
T ss_pred CCCccccCCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccE
Confidence 999999999999999999999999999999999986432 000 03489999999999999
Q ss_pred EECCCCCCccccccch-hhHHHHHHH-HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC
Q 017793 152 YKLPDNVSLEEGAMCE-PLSVGVHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA 229 (366)
Q Consensus 152 ~~~P~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~ 229 (366)
+++|+++++++++.+. .+.+||+++ +..++++|++|||+|+|++|++++|+|+.+|+.+|+++++++++.++++++|+
T Consensus 154 ~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~~Ga 233 (369)
T cd08301 154 AKINPEAPLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGV 233 (369)
T ss_pred EECCCCCCHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCC
Confidence 9999999999988775 677888876 45889999999999999999999999999998678999999999999999999
Q ss_pred ceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCC-ceEEEEcccCCCceeechH-hhhcCcEE
Q 017793 230 DETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTVALTP-AAAREVDV 307 (366)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~-~~~~~~~~ 307 (366)
+.++++....+++.+.++++. ++++|++||++|....+..++++++++ |+++.+|.......++... .+.+++++
T Consensus 234 ~~~i~~~~~~~~~~~~v~~~~---~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i 310 (369)
T cd08301 234 TEFVNPKDHDKPVQEVIAEMT---GGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNLLNGRTL 310 (369)
T ss_pred ceEEcccccchhHHHHHHHHh---CCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHHHhcCCeE
Confidence 988775432234555555553 448999999999887888999999996 9999999765322222222 23467888
Q ss_pred EEeecc----CCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEe
Q 017793 308 IGIFRY----RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF 364 (366)
Q Consensus 308 ~~~~~~----~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi 364 (366)
.+++.. +.+++++++++.++.+++.+.++++|+| +++++|++.+++++. .|+++
T Consensus 311 ~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l--~~~~~A~~~~~~~~~-~k~~~ 368 (369)
T cd08301 311 KGTLFGGYKPKTDLPNLVEKYMKKELELEKFITHELPF--SEINKAFDLLLKGEC-LRCIL 368 (369)
T ss_pred EEEecCCCChHHHHHHHHHHHHcCCCCcHHheeeeecH--HHHHHHHHHHHCCCc-eeEEe
Confidence 887643 3468899999999999877888999999 999999999999876 48886
No 17
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=100.00 E-value=1.1e-48 Score=355.29 Aligned_cols=309 Identities=30% Similarity=0.419 Sum_probs=257.0
Q ss_pred ceEEEEeeC---CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeC
Q 017793 15 NMAAWLLGI---KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVG 91 (366)
Q Consensus 15 ~~~~~~~~~---~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG 91 (366)
||++++.+. +.++++++|.|.|++|||||||+|+||||.|+.+.+|. .....++|+++|.|++|+|+++|
T Consensus 1 mka~~~~~~g~~~~l~~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~-------~~~~~~~P~i~G~d~aG~V~avG 73 (326)
T COG0604 1 MKAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGL-------APPVRPLPFIPGSEAAGVVVAVG 73 (326)
T ss_pred CeEEEEeccCCCceeEEEecCCCCCCCCeEEEEEEEeecChHHHHhccCC-------CCCCCCCCCcccceeEEEEEEeC
Confidence 567777743 45899999999999999999999999999999999843 11234589999999999999999
Q ss_pred CCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhH
Q 017793 92 SEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLS 170 (366)
Q Consensus 92 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~ 170 (366)
++|++|++||||+..+ . ...+|+|+||+.++++.++++|+++|+++||+++ ...
T Consensus 74 ~~V~~~~~GdrV~~~~-~------------------------~~~~G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~ 128 (326)
T COG0604 74 SGVTGFKVGDRVAALG-G------------------------VGRDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGL 128 (326)
T ss_pred CCCCCcCCCCEEEEcc-C------------------------CCCCCcceeEEEecHHHceeCCCCCCHHHHHHHHHHHH
Confidence 9999999999999742 0 0047999999999999999999999999999997 788
Q ss_pred HHHHHHHh-CCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHH
Q 017793 171 VGVHACRR-ANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGK 248 (366)
Q Consensus 171 ~a~~~l~~-~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~ 248 (366)
|||+++.. .++++|++|||+| +|++|.+++||||++|+ .++++.+++++.++++++|++.+++|.. +++.+.+++
T Consensus 129 TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~-~~v~~~~s~~k~~~~~~lGAd~vi~y~~--~~~~~~v~~ 205 (326)
T COG0604 129 TAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGA-TVVAVVSSSEKLELLKELGADHVINYRE--EDFVEQVRE 205 (326)
T ss_pred HHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-cEEEEecCHHHHHHHHhcCCCEEEcCCc--ccHHHHHHH
Confidence 99999954 8899999999998 79999999999999998 4555557777777999999999999754 568888887
Q ss_pred HHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCC--CceeechHhhhcCcEEEEeeccC-------CChHH
Q 017793 249 IQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT--EMTVALTPAAAREVDVIGIFRYR-------STWPL 319 (366)
Q Consensus 249 ~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~ 319 (366)
+.. +.++|+|||++|+. .+..++.+|+++|+++.+|...+ ...++...+..+.+.+.+..... +.+++
T Consensus 206 ~t~--g~gvDvv~D~vG~~-~~~~~l~~l~~~G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 282 (326)
T COG0604 206 LTG--GKGVDVVLDTVGGD-TFAASLAALAPGGRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAE 282 (326)
T ss_pred HcC--CCCceEEEECCCHH-HHHHHHHHhccCCEEEEEecCCCCCccccCHHHHhhccEEEEEecceecchHHHHHHHHH
Confidence 753 56899999999976 78889999999999999997663 33344556677778888776652 36777
Q ss_pred HHHHHHCCCCCCCCceEEEecCChhhHH--HHHHHHHcCCCceEEEeeC
Q 017793 320 CIEFLRSGKIDVKPLITHRFGFTQKEIE--DAFEISAQGGNAIKVMFNL 366 (366)
Q Consensus 320 ~~~~l~~g~~~~~~~~~~~~~l~~~~~~--~a~~~~~~~~~~gkvvi~~ 366 (366)
+++++++|.+ ++.+.++|+| ++.. .++..+. ++..||+|+++
T Consensus 283 l~~~~~~g~l--~~~i~~~~~l--~e~~~a~a~~~~~-~~~~GKvvl~~ 326 (326)
T COG0604 283 LFDLLASGKL--KPVIDRVYPL--AEAPAAAAHLLLE-RRTTGKVVLKV 326 (326)
T ss_pred HHHHHHcCCC--cceeccEech--hhhHHHHHHHHcc-cCCcceEEEeC
Confidence 9999999999 7778789999 8854 4444444 58999999974
No 18
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=100.00 E-value=9.8e-48 Score=356.86 Aligned_cols=345 Identities=38% Similarity=0.648 Sum_probs=292.8
Q ss_pred ceEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhccccccccc---CccCCCCcccccceeEEEEEeC
Q 017793 15 NMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCA---NFIVKKPMVIGHECAGIIEEVG 91 (366)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~---~~~~~~p~i~G~e~~G~V~~vG 91 (366)
||++++.+++.++++++|.|+|+++||+||+.++++|++|+....+......... .....+|.++|+|++|+|+++|
T Consensus 1 mka~~~~~~~~l~~~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG 80 (351)
T cd08233 1 MKAARYHGRKDIRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVVEVG 80 (351)
T ss_pred CceEEEecCCceEEEeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEEEeC
Confidence 6788888888999999999999999999999999999999976653211000000 0112368899999999999999
Q ss_pred CCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccchhhHH
Q 017793 92 SEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSV 171 (366)
Q Consensus 92 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~~~~~ 171 (366)
+++++|++||+|++.+..+|+.|.+|+.+.+.+|++..+.+....+|+|+||+.++.+.++++|+++++++++.+.++.+
T Consensus 81 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~~~aa~~~~~~t 160 (351)
T cd08233 81 SGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFIGLGGGGGGFAEYVVVPAYHVHKLPDNVPLEEAALVEPLAV 160 (351)
T ss_pred CCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCceeccCCCCCceeeEEEechHHeEECcCCCCHHHhhhccHHHH
Confidence 99999999999999988899999999999999999887655433479999999999999999999999999987777889
Q ss_pred HHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHH
Q 017793 172 GVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN 251 (366)
Q Consensus 172 a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~ 251 (366)
||+++...++++|++|||+|+|++|++++|+|+..|++.|+++++++++.++++++|++.++++.. .++.+.+.++.
T Consensus 161 a~~~l~~~~~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~--~~~~~~l~~~~- 237 (351)
T cd08233 161 AWHAVRRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEELGATIVLDPTE--VDVVAEVRKLT- 237 (351)
T ss_pred HHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCc--cCHHHHHHHHh-
Confidence 999997788999999999999999999999999999977888889999999999999998887543 46666665543
Q ss_pred hhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeecc-CCChHHHHHHHHCCCCC
Q 017793 252 AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKID 330 (366)
Q Consensus 252 ~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~ 330 (366)
.++++|++||++|+...+..++++|+++|+++.+|.......++...+..+++++.+.+.+ .+++++++++++++.+.
T Consensus 238 -~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~l~ 316 (351)
T cd08233 238 -GGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWEKPISFNPNDLVLKEKTLTGSICYTREDFEEVIDLLASGKID 316 (351)
T ss_pred -CCCCCCEEEECCCCHHHHHHHHHhccCCCEEEEEccCCCCCccCHHHHHhhCcEEEEEeccCcchHHHHHHHHHcCCCC
Confidence 2457999999999877889999999999999999976544555666677888999998766 67899999999999997
Q ss_pred CCCceEEEecCChhhH-HHHHHHHHcCCCc-eEEEee
Q 017793 331 VKPLITHRFGFTQKEI-EDAFEISAQGGNA-IKVMFN 365 (366)
Q Consensus 331 ~~~~~~~~~~l~~~~~-~~a~~~~~~~~~~-gkvvi~ 365 (366)
+.+.++++|++ +++ ++|++.+.+++.. ||+||.
T Consensus 317 ~~~~i~~~~~l--~e~~~~a~~~~~~~~~~~~k~v~~ 351 (351)
T cd08233 317 AEPLITSRIPL--EDIVEKGFEELINDKEQHVKILVS 351 (351)
T ss_pred hHHheEEEecH--HHHHHHHHHHHHhCCCCceEEEeC
Confidence 77778889999 996 7999999999874 999974
No 19
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=100.00 E-value=8.5e-48 Score=359.01 Aligned_cols=337 Identities=28% Similarity=0.446 Sum_probs=277.2
Q ss_pred cceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCC
Q 017793 14 QNMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGS 92 (366)
Q Consensus 14 ~~~~~~~~~~-~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~ 92 (366)
+||++++..+ ++++++++|.|+|+++||+|||.++|+|++|++++.|.+ ....+|.++|||++|+|+++|+
T Consensus 2 ~~~a~~~~~~~~~~~~~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~--------~~~~~p~v~G~E~~G~V~~vG~ 73 (368)
T cd08300 2 TCKAAVAWEAGKPLSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGAD--------PEGLFPVILGHEGAGIVESVGE 73 (368)
T ss_pred cceEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEechhhHHHhcCCC--------ccCCCCceeccceeEEEEEeCC
Confidence 4788887755 689999999999999999999999999999999887431 1134689999999999999999
Q ss_pred CCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccc---CC-----------------CCCCCcceEEEEecCCceE
Q 017793 93 EVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF---GS-----------------PPTNGSLAHKVVHPAKLCY 152 (366)
Q Consensus 93 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-----------------~~~~g~~~e~~~~~~~~~~ 152 (366)
++++|++||+|++.+..+|++|.+|+.++++.|+++... +. ....|+|+||+.++.+.++
T Consensus 74 ~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~ 153 (368)
T cd08300 74 GVTSVKPGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVA 153 (368)
T ss_pred CCccCCCCCEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccceeEEEEchhceE
Confidence 999999999999998899999999999999999875321 00 0024799999999999999
Q ss_pred ECCCCCCccccccch-hhHHHHHHH-HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCc
Q 017793 153 KLPDNVSLEEGAMCE-PLSVGVHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD 230 (366)
Q Consensus 153 ~~P~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~ 230 (366)
++|+++++++|+.+. .+.+||+++ +..++++|++|||+|+|++|++++|+|+.+|+.+|+++++++++.++++++|++
T Consensus 154 ~iP~~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~lGa~ 233 (368)
T cd08300 154 KINPEAPLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGAT 233 (368)
T ss_pred eCCCCCChhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCC
Confidence 999999999998876 778899887 558899999999999999999999999999997799999999999999999999
Q ss_pred eeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCC-ceEEEEcccCCCcee--echHhhhcCcEE
Q 017793 231 ETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTV--ALTPAAAREVDV 307 (366)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~--~~~~~~~~~~~~ 307 (366)
.++++.+..+++.+.+.++. ++++|++||++|+...+..++++++++ |+++.+|.......+ ....+. ....+
T Consensus 234 ~~i~~~~~~~~~~~~v~~~~---~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~ 309 (368)
T cd08300 234 DCVNPKDHDKPIQQVLVEMT---DGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLV-TGRVW 309 (368)
T ss_pred EEEcccccchHHHHHHHHHh---CCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHh-hcCeE
Confidence 98876543234666665553 348999999999877899999999886 999999865322122 222222 33455
Q ss_pred EEeec----cCCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEee
Q 017793 308 IGIFR----YRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 365 (366)
Q Consensus 308 ~~~~~----~~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~ 365 (366)
.++.. ...++++++++++++++.+.+.++++|+| +++++|++.+.+++. .|++++
T Consensus 310 ~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~~i~~~~~l--e~~~~A~~~~~~~~~-~k~~~~ 368 (368)
T cd08300 310 KGTAFGGWKSRSQVPKLVEDYMKGKIKVDEFITHTMPL--DEINEAFDLMHAGKS-IRTVVK 368 (368)
T ss_pred EEEEecccCcHHHHHHHHHHHHcCCCChhhceeeeEcH--HHHHHHHHHHhCCCC-ceeeeC
Confidence 55432 24678899999999999877889999999 999999999988865 688874
No 20
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=100.00 E-value=5.9e-48 Score=358.42 Aligned_cols=336 Identities=22% Similarity=0.319 Sum_probs=273.9
Q ss_pred ccCCcccceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEE
Q 017793 8 DEGDKNQNMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGI 86 (366)
Q Consensus 8 ~~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~ 86 (366)
++..|+++.+++..+. +.+++.++|.|.|+++||+|||.++|||++|++++.|.. ....+|.++|||++|+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~--------~~~~~p~i~GhE~~G~ 77 (360)
T PLN02586 6 EEEHPQKAFGWAARDPSGVLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEW--------GFTRYPIVPGHEIVGI 77 (360)
T ss_pred hhhchhheeEEEecCCCCCceEEeecCCCCCCCeEEEEEEEecCChhhHhhhcCCc--------CCCCCCccCCcceeEE
Confidence 4456777777777755 678999999999999999999999999999999887421 1134689999999999
Q ss_pred EEEeCCCCCCCCCCCEEEEcCC-cCCCCCccccCCCCCCCCCccccC------CCCCCCcceEEEEecCCceEECCCCCC
Q 017793 87 IEEVGSEVKSLEVGDRVALEPG-ISCGHCSLCKAGSYNLCPEMRFFG------SPPTNGSLAHKVVHPAKLCYKLPDNVS 159 (366)
Q Consensus 87 V~~vG~~v~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~e~~~~~~~~~~~~P~~~~ 159 (366)
|+++|+++++|++||+|++.+. .+|++|.+|+.|.+++|++..+.. +...+|+|+||++++.+.++++|++++
T Consensus 78 V~~vG~~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls 157 (360)
T PLN02586 78 VTKLGKNVKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHFVLRFPDNLP 157 (360)
T ss_pred EEEECCCCCccCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCCCccceEEEEchHHeeeCCCCCC
Confidence 9999999999999999986554 579999999999999999865431 122479999999999999999999999
Q ss_pred ccccccch-hhHHHHHHHHh-CCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChh-HHHHHHHcCCceeeecC
Q 017793 160 LEEGAMCE-PLSVGVHACRR-ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQ-RLSIARNLGADETAKVS 236 (366)
Q Consensus 160 ~~~aa~~~-~~~~a~~~l~~-~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~-~~~~~~~lg~~~~~~~~ 236 (366)
+++|+.+. .+.++|+++.. ..+++|++|||.|+|++|++++|+||.+|+ .+++++.+++ +.++++++|++.++++.
T Consensus 158 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~vi~~~~~~~~~~~~~~~~Ga~~vi~~~ 236 (360)
T PLN02586 158 LDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISSSSNKEDEAINRLGADSFLVST 236 (360)
T ss_pred HHHhhhhhcchHHHHHHHHHhcccCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCcchhhhHHHhCCCcEEEcCC
Confidence 99998776 67788888864 557899999999999999999999999999 4665555544 45677899999887643
Q ss_pred CCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeecc-CC
Q 017793 237 TDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RS 315 (366)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 315 (366)
. . +.+++.. +++|++||++|....++.++++++++|+++.+|.......++...++.++..+.+++.+ ..
T Consensus 237 ~--~---~~~~~~~----~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~i~g~~~~~~~ 307 (360)
T PLN02586 237 D--P---EKMKAAI----GTMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEKPLELPIFPLVLGRKLVGGSDIGGIK 307 (360)
T ss_pred C--H---HHHHhhc----CCCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCCCCCCccCHHHHHhCCeEEEEcCcCCHH
Confidence 2 1 2333332 36999999999877889999999999999999865444455566667777788777654 45
Q ss_pred ChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793 316 TWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 366 (366)
Q Consensus 316 ~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~ 366 (366)
+++++++++++|++. +.+ ++|+| +++++|++.+.+++..||+|+++
T Consensus 308 ~~~~~~~li~~g~i~--~~~-~~~~l--~~~~~A~~~~~~~~~~gkvvi~~ 353 (360)
T PLN02586 308 ETQEMLDFCAKHNIT--ADI-ELIRM--DEINTAMERLAKSDVRYRFVIDV 353 (360)
T ss_pred HHHHHHHHHHhCCCC--CcE-EEEeH--HHHHHHHHHHHcCCCcEEEEEEc
Confidence 789999999999994 444 57899 99999999999998889999864
No 21
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=100.00 E-value=2.1e-47 Score=355.98 Aligned_cols=336 Identities=28% Similarity=0.445 Sum_probs=280.7
Q ss_pred cceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCC
Q 017793 14 QNMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGS 92 (366)
Q Consensus 14 ~~~~~~~~~~-~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~ 92 (366)
.+|++++..+ +.++++++|.|.++++||+|||.++|+|++|++.+.| .....+|.++|||++|+|+++|+
T Consensus 2 ~~ka~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g---------~~~~~~p~i~G~e~~G~V~~vG~ 72 (365)
T cd08277 2 KCKAAVAWEAGKPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEG---------FKATLFPVILGHEGAGIVESVGE 72 (365)
T ss_pred ccEEEEEccCCCCcEEEEEECCCCCCCEEEEEEEEEeechhhHHHhcC---------CCCCCCCeecccceeEEEEeeCC
Confidence 4788888865 5689999999999999999999999999999998883 22345689999999999999999
Q ss_pred CCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCC-------------------CCCCCcceEEEEecCCceEE
Q 017793 93 EVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGS-------------------PPTNGSLAHKVVHPAKLCYK 153 (366)
Q Consensus 93 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~g~~~e~~~~~~~~~~~ 153 (366)
+++++++||+|++.+..+|++|.+|..|++++|++...... ....|+|+||++++.+.+++
T Consensus 73 ~v~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~ 152 (365)
T cd08277 73 GVTNLKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAK 152 (365)
T ss_pred CCccCCCCCEEEECCCCCCCCCchhcCcCcccCcCccccccccccCCccccccCCcccccccccccceeeEEEchhheEE
Confidence 99999999999999889999999999999999998643210 01258999999999999999
Q ss_pred CCCCCCccccccch-hhHHHHHHH-HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCce
Q 017793 154 LPDNVSLEEGAMCE-PLSVGVHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE 231 (366)
Q Consensus 154 ~P~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~ 231 (366)
+|+++++++++.+. .+.+||+++ +.+++++|++|||+|+|++|++++|+|+.+|+.+|+++++++++.++++++|++.
T Consensus 153 lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~~ga~~ 232 (365)
T cd08277 153 IDPAAPLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATD 232 (365)
T ss_pred CCCCCCHHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCc
Confidence 99999999998876 788899886 5688999999999999999999999999999977999999999999999999998
Q ss_pred eeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCC-ceEEEEcccCC-CceeechHhhhcCcEEEE
Q 017793 232 TAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKT-EMTVALTPAAAREVDVIG 309 (366)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~ 309 (366)
+++......++.+.+.++. ++++|++|||+|+...+..++++++++ |+++.+|.... ..+++...+.. +.++.+
T Consensus 233 ~i~~~~~~~~~~~~~~~~~---~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~i~g 308 (365)
T cd08277 233 FINPKDSDKPVSEVIREMT---GGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAELSIRPFQLIL-GRTWKG 308 (365)
T ss_pred EeccccccchHHHHHHHHh---CCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCccccccCHhHHhh-CCEEEe
Confidence 8775433234455555443 468999999999877889999999885 99999987542 22333333443 778887
Q ss_pred eecc----CCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEee
Q 017793 310 IFRY----RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 365 (366)
Q Consensus 310 ~~~~----~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~ 365 (366)
++.+ ..++++++++++++.+.+.+.++++|+| +++++|++.+++++ ..|++++
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l--~~~~~A~~~~~~~~-~~k~~i~ 365 (365)
T cd08277 309 SFFGGFKSRSDVPKLVSKYMNKKFDLDELITHVLPF--EEINKGFDLMKSGE-CIRTVIT 365 (365)
T ss_pred eecCCCChHHHHHHHHHHHHCCCcChhHheeeEEch--hhHHHHHHHHHCCC-CceEeeC
Confidence 7654 3468899999999998878889999999 99999999999886 4698874
No 22
>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=1.3e-48 Score=322.89 Aligned_cols=308 Identities=27% Similarity=0.384 Sum_probs=265.6
Q ss_pred CcccceEEEEe---eCCceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCc-cCCCCcccccceeEE
Q 017793 11 DKNQNMAAWLL---GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANF-IVKKPMVIGHECAGI 86 (366)
Q Consensus 11 ~~~~~~~~~~~---~~~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~-~~~~p~i~G~e~~G~ 86 (366)
.|++.+..+++ +++.+++++.|.|+|.|+|++||..|+|+|+.|.-+.+ |.+ +.+.|+++|.|++|+
T Consensus 5 ~p~~~k~i~v~e~Ggydvlk~ed~pv~~papgel~iknka~GlNfid~y~Rk---------GlY~~~plPytpGmEaaGv 75 (336)
T KOG1197|consen 5 SPPLLKCIVVTEFGGYDVLKLEDRPVPPPAPGELTIKNKACGLNFIDLYFRK---------GLYDPAPLPYTPGMEAAGV 75 (336)
T ss_pred CCchheEEEEeccCCcceEEEeeecCCCCCCCceEEeehhcCccHHHHHHhc---------cccCCCCCCcCCCcccceE
Confidence 46777888888 44789999999999999999999999999999998888 445 678899999999999
Q ss_pred EEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccc
Q 017793 87 IEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC 166 (366)
Q Consensus 87 V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~ 166 (366)
|+++|++|+++++||||+.. +..|.|+|+..+|...++++|+.+++.+||++
T Consensus 76 VvAvG~gvtdrkvGDrVayl----------------------------~~~g~yaee~~vP~~kv~~vpe~i~~k~aaa~ 127 (336)
T KOG1197|consen 76 VVAVGEGVTDRKVGDRVAYL----------------------------NPFGAYAEEVTVPSVKVFKVPEAITLKEAAAL 127 (336)
T ss_pred EEEecCCccccccccEEEEe----------------------------ccchhhheeccccceeeccCCcccCHHHHHHH
Confidence 99999999999999999964 46899999999999999999999999999877
Q ss_pred h-hhHHHHHHHHh-CCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchH
Q 017793 167 E-PLSVGVHACRR-ANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVD 243 (366)
Q Consensus 167 ~-~~~~a~~~l~~-~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~ 243 (366)
. ...|||..+++ .++++|++||++. +|++|++++|++++.|+ .+|++.++.+|++.+++.|+.+.|+|++ +|+.
T Consensus 128 llq~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a-~tI~~asTaeK~~~akenG~~h~I~y~~--eD~v 204 (336)
T KOG1197|consen 128 LLQGLTAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGA-HTIATASTAEKHEIAKENGAEHPIDYST--EDYV 204 (336)
T ss_pred HHHHHHHHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcCc-EEEEEeccHHHHHHHHhcCCcceeeccc--hhHH
Confidence 6 78888888754 8999999999996 89999999999999999 7888889999999999999999999865 7888
Q ss_pred HHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCc-eeechHhhhcCcEEE-----EeeccCCC-
Q 017793 244 TDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEM-TVALTPAAAREVDVI-----GIFRYRST- 316 (366)
Q Consensus 244 ~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~~~-----~~~~~~~~- 316 (366)
+.+.+++. ++|+|+++|++|.+ ++..++.+|++.|.++.+|..++.. ++++..++.+.+.+. |...++..
T Consensus 205 ~~V~kiTn--gKGVd~vyDsvG~d-t~~~sl~~Lk~~G~mVSfG~asgl~~p~~l~~ls~k~l~lvrpsl~gYi~g~~el 281 (336)
T KOG1197|consen 205 DEVKKITN--GKGVDAVYDSVGKD-TFAKSLAALKPMGKMVSFGNASGLIDPIPLNQLSPKALQLVRPSLLGYIDGEVEL 281 (336)
T ss_pred HHHHhccC--CCCceeeeccccch-hhHHHHHHhccCceEEEeccccCCCCCeehhhcChhhhhhccHhhhcccCCHHHH
Confidence 88888864 89999999999965 8999999999999999999776533 344444444444433 22222222
Q ss_pred ---hHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEee
Q 017793 317 ---WPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 365 (366)
Q Consensus 317 ---~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~ 365 (366)
..+++.++.+|.+ .+.+.++|+| +++.+|+..+++.+..||+++.
T Consensus 282 ~~~v~rl~alvnsg~l--k~~I~~~ypl--s~vadA~~diesrktvGkvlLl 329 (336)
T KOG1197|consen 282 VSYVARLFALVNSGHL--KIHIDHVYPL--SKVADAHADIESRKTVGKVLLL 329 (336)
T ss_pred HHHHHHHHHHhhcCcc--ceeeeeecch--HHHHHHHHHHHhhhccceEEEe
Confidence 3467888889999 8888999999 9999999999999999999974
No 23
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=4.7e-47 Score=353.42 Aligned_cols=320 Identities=22% Similarity=0.334 Sum_probs=264.8
Q ss_pred CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCCCCCCCCCCEE
Q 017793 24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRV 103 (366)
Q Consensus 24 ~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V 103 (366)
+.+.+.++|.|.|+++||+|||.++|||++|++++.|.+ ....+|.++|||++|+|+++|+++++|++||||
T Consensus 17 ~~l~~~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~--------~~~~~p~i~GhE~aG~Vv~vG~~v~~~~vGdrV 88 (375)
T PLN02178 17 GVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHW--------GFSRYPIIPGHEIVGIATKVGKNVTKFKEGDRV 88 (375)
T ss_pred CCceEEeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCC--------CCCCCCcccCceeeEEEEEECCCCCccCCCCEE
Confidence 678888999999999999999999999999999887421 012458899999999999999999999999999
Q ss_pred EEcCCc-CCCCCccccCCCCCCCCCccccC------CCCCCCcceEEEEecCCceEECCCCCCccccccch-hhHHHHHH
Q 017793 104 ALEPGI-SCGHCSLCKAGSYNLCPEMRFFG------SPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHA 175 (366)
Q Consensus 104 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~~a~~~ 175 (366)
++.+.. +|++|.+|+.|++++|++..+.. +....|+|+||+.++++.++++|+++++++|+.+. ...++|++
T Consensus 89 ~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~ta~~a 168 (375)
T PLN02178 89 GVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSP 168 (375)
T ss_pred EEcCccCCCCCChhHhCcchhcCCCccccccccccCCCcCCCccccEEEEchHHeEECCCCCCHHHcchhhccchHHHHH
Confidence 876654 69999999999999999865321 11236999999999999999999999999998775 66788888
Q ss_pred HHhCC--CCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCCh-hHHHHHHHcCCceeeecCCCCcchHHHHHHHHHh
Q 017793 176 CRRAN--VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV-QRLSIARNLGADETAKVSTDIEDVDTDVGKIQNA 252 (366)
Q Consensus 176 l~~~~--~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~-~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~ 252 (366)
+.... .++|++|+|.|+|++|++++|+|+.+|+ .+++++.++ ++.++++++|++.++++.. . +.+.+.
T Consensus 169 l~~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~--~---~~v~~~--- 239 (375)
T PLN02178 169 MKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGL-RVTVISRSSEKEREAIDRLGADSFLVTTD--S---QKMKEA--- 239 (375)
T ss_pred HHHhCCCCCCCCEEEEEcccHHHHHHHHHHHHcCC-eEEEEeCChHHhHHHHHhCCCcEEEcCcC--H---HHHHHh---
Confidence 86543 3689999999999999999999999999 567766654 4578889999998877532 1 233332
Q ss_pred hCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeecc-CCChHHHHHHHHCCCCCC
Q 017793 253 MGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDV 331 (366)
Q Consensus 253 ~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~ 331 (366)
. .++|++|||+|.+..+..++++++++|+++.+|.......++...+..+++++.|++.+ .++++++++++++|++
T Consensus 240 ~-~~~D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i-- 316 (375)
T PLN02178 240 V-GTMDFIIDTVSAEHALLPLFSLLKVSGKLVALGLPEKPLDLPIFPLVLGRKMVGGSQIGGMKETQEMLEFCAKHKI-- 316 (375)
T ss_pred h-CCCcEEEECCCcHHHHHHHHHhhcCCCEEEEEccCCCCCccCHHHHHhCCeEEEEeCccCHHHHHHHHHHHHhCCC--
Confidence 2 36999999999877789999999999999999976544455666677888999998765 4678999999999999
Q ss_pred CCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793 332 KPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 366 (366)
Q Consensus 332 ~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~ 366 (366)
++.+ +.|+| +++++|++.+.+++..||+|+++
T Consensus 317 ~~~i-~~~~l--~~~~~A~~~~~~~~~~gkvvi~~ 348 (375)
T PLN02178 317 VSDI-ELIKM--SDINSAMDRLAKSDVRYRFVIDV 348 (375)
T ss_pred cccE-EEEeH--HHHHHHHHHHHcCCCceEEEEEe
Confidence 4445 57899 99999999999998899999864
No 24
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=100.00 E-value=5.7e-47 Score=351.10 Aligned_cols=333 Identities=23% Similarity=0.441 Sum_probs=278.7
Q ss_pred EEeeCC-ceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCCCCCC
Q 017793 19 WLLGIK-TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSL 97 (366)
Q Consensus 19 ~~~~~~-~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~ 97 (366)
++.++. .++++++|.|.|+++||+|||.++|+|++|++.+.+.. .....+|.++|||++|+|+++|++++.+
T Consensus 3 ~~~~~g~~~~~~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~-------~~~~~~p~i~GhE~~G~V~~vG~~v~~~ 75 (349)
T TIGR03201 3 MMTEPGKPMVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGV-------RTNHALPLALGHEISGRVIQAGAGAASW 75 (349)
T ss_pred eEecCCCCceEEeccCCCCCCCeEEEEEEEEeecccchHHHcCCC-------CccCCCCeeccccceEEEEEeCCCcCCC
Confidence 455554 48999999999999999999999999999998764211 0113468999999999999999999887
Q ss_pred CCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCC------CCCccccccch-hhH
Q 017793 98 EVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPD------NVSLEEGAMCE-PLS 170 (366)
Q Consensus 98 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~------~~~~~~aa~~~-~~~ 170 (366)
+||+|++.+..+|++|.+|..+.+++|+...+.+. ...|+|+||+.++.+.++++|+ ++++++++.+. .+.
T Consensus 76 -~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~-~~~G~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~ 153 (349)
T TIGR03201 76 -IGKAVIVPAVIPCGECELCKTGRGTICRAQKMPGN-DMQGGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVT 153 (349)
T ss_pred -CCCEEEECCCCCCCCChhhhCcCcccCCCCCccCc-CCCCcccceEEechHHeEECCcccccccCCCHHHhhhhcchHH
Confidence 99999999999999999999999999998766553 3479999999999999999999 88888887664 788
Q ss_pred HHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCC-cchHHHHHHH
Q 017793 171 VGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDI-EDVDTDVGKI 249 (366)
Q Consensus 171 ~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~-~~~~~~~~~~ 249 (366)
++|+++.+.++++|++|||+|+|++|++++|+|+..|+ .++++++++++.++++++|++.++++.... .++.+.++++
T Consensus 154 ta~~a~~~~~~~~g~~VlV~G~G~vG~~a~~~a~~~G~-~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~ 232 (349)
T TIGR03201 154 TPYQAAVQAGLKKGDLVIVIGAGGVGGYMVQTAKAMGA-AVVAIDIDPEKLEMMKGFGADLTLNPKDKSAREVKKLIKAF 232 (349)
T ss_pred HHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceEecCccccHHHHHHHHHhh
Confidence 99999888889999999999999999999999999999 688898999999999999998887754321 2344444444
Q ss_pred HHhhCCCCc----EEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeecc-CCChHHHHHHH
Q 017793 250 QNAMGSGID----VSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFL 324 (366)
Q Consensus 250 ~~~~~~~~d----~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l 324 (366)
. .+.++| ++|||+|+....+.++++++++|+++.+|.......++...++.+..++.+.+.. ..+++++++++
T Consensus 233 t--~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i 310 (349)
T TIGR03201 233 A--KARGLRSTGWKIFECSGSKPGQESALSLLSHGGTLVVVGYTMAKTEYRLSNLMAFHARALGNWGCPPDRYPAALDLV 310 (349)
T ss_pred c--ccCCCCCCcCEEEECCCChHHHHHHHHHHhcCCeEEEECcCCCCcccCHHHHhhcccEEEEEecCCHHHHHHHHHHH
Confidence 3 246776 8999999888888899999999999999976544455555666777888888764 56799999999
Q ss_pred HCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793 325 RSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 366 (366)
Q Consensus 325 ~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~ 366 (366)
++|++.+.+.++ .|+| +++++|++.+.+++..||++++.
T Consensus 311 ~~g~i~~~~~i~-~~~l--~~~~~A~~~~~~~~~~~k~~~~~ 349 (349)
T TIGR03201 311 LDGKIQLGPFVE-RRPL--DQIEHVFAAAHHHKLKRRAILTP 349 (349)
T ss_pred HcCCCCcccceE-EecH--HHHHHHHHHHHcCCccceEEecC
Confidence 999997776664 6888 99999999999998899999863
No 25
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=100.00 E-value=9.1e-47 Score=350.64 Aligned_cols=331 Identities=25% Similarity=0.363 Sum_probs=265.2
Q ss_pred ceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCC
Q 017793 15 NMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE 93 (366)
Q Consensus 15 ~~~~~~~~~-~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~ 93 (366)
|+++++..+ ..++++++|.|+|+++||+|||+|+|||++|++.++|.+... ....+|.++|||++|+|+++|++
T Consensus 1 mka~~~~~~~~~l~~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~-----~~~~~p~i~G~e~~G~V~~vG~~ 75 (355)
T cd08230 1 MKAIAVKPGKPGVRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTA-----PPGEDFLVLGHEALGVVEEVGDG 75 (355)
T ss_pred CceeEecCCCCCCeEEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCC-----CCCCCCeeeccccceEEEEecCC
Confidence 567777744 249999999999999999999999999999999998542111 01235789999999999999999
Q ss_pred CCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccc--CCCCCCCcceEEEEecCCceEECCCCCCccccccchhhHH
Q 017793 94 VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF--GSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSV 171 (366)
Q Consensus 94 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~~~~~ 171 (366)
+.|++||||+..+..+|+.|.+|..+++++|+...++ +....+|+|+||+.++++.++++|++++ +.++...++++
T Consensus 76 -~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~g~~~~~G~~aey~~~~~~~~~~~P~~~~-~~a~~~~p~~~ 153 (355)
T cd08230 76 -SGLSPGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIKGLHGFMREYFVDDPEYLVKVPPSLA-DVGVLLEPLSV 153 (355)
T ss_pred -CCCCCCCEEEeccccCCCcChhhhCcCcccCCCcceeccCcCCCCccceeEEEeccccEEECCCCCC-cceeecchHHH
Confidence 9999999999988889999999999999999976543 2223579999999999999999999999 55555556666
Q ss_pred HHHHHH-------hCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcC---ChhHHHHHHHcCCceeeecCCCCcc
Q 017793 172 GVHACR-------RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDV---DVQRLSIARNLGADETAKVSTDIED 241 (366)
Q Consensus 172 a~~~l~-------~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~---~~~~~~~~~~lg~~~~~~~~~~~~~ 241 (366)
++.++. ....++|++|||+|+|++|++++|+||.+|+ .++++++ +++|.++++++|++. +++.. ++
T Consensus 154 ~~~a~~~~~~~~~~~~~~~g~~vlI~G~G~vG~~a~q~ak~~G~-~vi~~~~~~~~~~~~~~~~~~Ga~~-v~~~~--~~ 229 (355)
T cd08230 154 VEKAIEQAEAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGF-EVYVLNRRDPPDPKADIVEELGATY-VNSSK--TP 229 (355)
T ss_pred HHHHHHHHhhhhhhcccCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHHcCCEE-ecCCc--cc
Confidence 554442 1236789999999999999999999999999 6887876 678999999999986 34432 33
Q ss_pred hHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCC--Cceee----chHhhhcCcEEEEeecc-C
Q 017793 242 VDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT--EMTVA----LTPAAAREVDVIGIFRY-R 314 (366)
Q Consensus 242 ~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~----~~~~~~~~~~~~~~~~~-~ 314 (366)
+.+ . . ...++|+||||+|.+..+..++++++++|+++.+|.... ...++ ...++.+++++.|++.. .
T Consensus 230 ~~~-~---~--~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~ 303 (355)
T cd08230 230 VAE-V---K--LVGEFDLIIEATGVPPLAFEALPALAPNGVVILFGVPGGGREFEVDGGELNRDLVLGNKALVGSVNANK 303 (355)
T ss_pred hhh-h---h--hcCCCCEEEECcCCHHHHHHHHHHccCCcEEEEEecCCCCCccccChhhhhhhHhhcCcEEEEecCCch
Confidence 322 1 1 135899999999987788999999999999999997654 22333 24567789999998765 5
Q ss_pred CChHHHHHHHHCCCC----CCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793 315 STWPLCIEFLRSGKI----DVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 366 (366)
Q Consensus 315 ~~~~~~~~~l~~g~~----~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~ 366 (366)
++++++++++.++.+ .+.+.++++|++ +++++|++.++++. +|+++++
T Consensus 304 ~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~l--~~~~~a~~~~~~~~--~K~v~~~ 355 (355)
T cd08230 304 RHFEQAVEDLAQWKYRWPGVLERLITRRVPL--EEFAEALTEKPDGE--IKVVIEW 355 (355)
T ss_pred hhHHHHHHHHHhcccccccchHHheeeeecH--HHHHHHHHhcccCC--eEEEeeC
Confidence 679999999998873 246778899999 99999999887653 5999875
No 26
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=100.00 E-value=1.6e-46 Score=344.78 Aligned_cols=312 Identities=24% Similarity=0.341 Sum_probs=267.5
Q ss_pred CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCCCCCCCCCCEE
Q 017793 24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRV 103 (366)
Q Consensus 24 ~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V 103 (366)
..++++++|.|.|+++||+|||.++|+|++|++.+.|.+. ...+|.++|||++|+|+++|+++++|++||+|
T Consensus 13 ~~l~~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~--------~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V 84 (329)
T TIGR02822 13 GPLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLP--------VHRPRVTPGHEVVGEVAGRGADAGGFAVGDRV 84 (329)
T ss_pred CCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCC--------CCCCCccCCcceEEEEEEECCCCcccCCCCEE
Confidence 3589999999999999999999999999999998884310 12247899999999999999999999999999
Q ss_pred EEcCC-cCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhHHHHHHHHhCCC
Q 017793 104 ALEPG-ISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACRRANV 181 (366)
Q Consensus 104 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~~a~~~l~~~~~ 181 (366)
++.+. .+|+.|.+|+.+++++|+.+.+++. ..+|+|+||+.++.+.++++|+++++++++.+. .+.+||++++++++
T Consensus 85 ~~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~-~~~G~~aey~~v~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~~~~~~ 163 (329)
T TIGR02822 85 GIAWLRRTCGVCRYCRRGAENLCPASRYTGW-DTDGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGYRALLRASL 163 (329)
T ss_pred EEcCccCcCCCChHHhCcCcccCCCcccCCc-ccCCcceeEEEeccccEEECCCCCCHHHhHHHhccchHHHHHHHhcCC
Confidence 88664 4799999999999999999877653 357999999999999999999999999988665 78899999988889
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEE
Q 017793 182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF 261 (366)
Q Consensus 182 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl 261 (366)
++|++|||+|+|++|++++|+|+..|+ .|++++++++|.++++++|++.++++... ...++|+++
T Consensus 164 ~~g~~VlV~G~g~iG~~a~~~a~~~G~-~vi~~~~~~~~~~~a~~~Ga~~vi~~~~~--------------~~~~~d~~i 228 (329)
T TIGR02822 164 PPGGRLGLYGFGGSAHLTAQVALAQGA-TVHVMTRGAAARRLALALGAASAGGAYDT--------------PPEPLDAAI 228 (329)
T ss_pred CCCCEEEEEcCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHhCCceecccccc--------------CcccceEEE
Confidence 999999999999999999999999999 68888899999999999999988764211 023689999
Q ss_pred EcCCChHHHHHHHHhhcCCceEEEEcccCC-CceeechHhhhcCcEEEEeecc-CCChHHHHHHHHCCCCCCCCceEEEe
Q 017793 262 DCVGFDKTMSTALNATRPGGKVCLIGLAKT-EMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPLITHRF 339 (366)
Q Consensus 262 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~~~~~~~~~ 339 (366)
++.+....+..++++++++|+++.+|.... ...++...+..+++++.+++.. ..++.+++++++++++. .++++|
T Consensus 229 ~~~~~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i~---~i~~~~ 305 (329)
T TIGR02822 229 LFAPAGGLVPPALEALDRGGVLAVAGIHLTDTPPLNYQRHLFYERQIRSVTSNTRADAREFLELAAQHGVR---VTTHTY 305 (329)
T ss_pred ECCCcHHHHHHHHHhhCCCcEEEEEeccCccCCCCCHHHHhhCCcEEEEeecCCHHHHHHHHHHHHhCCCe---eEEEEE
Confidence 988888899999999999999999997432 2234455566788899888765 45688899999999983 357899
Q ss_pred cCChhhHHHHHHHHHcCCCceEEEe
Q 017793 340 GFTQKEIEDAFEISAQGGNAIKVMF 364 (366)
Q Consensus 340 ~l~~~~~~~a~~~~~~~~~~gkvvi 364 (366)
+| +++++|++.+.+++..||+|+
T Consensus 306 ~l--~~~~~A~~~~~~~~~~Gkvvl 328 (329)
T TIGR02822 306 PL--SEADRALRDLKAGRFDGAAVL 328 (329)
T ss_pred eH--HHHHHHHHHHHcCCCceEEEe
Confidence 99 999999999999999999987
No 27
>PLN02702 L-idonate 5-dehydrogenase
Probab=100.00 E-value=1.4e-45 Score=343.95 Aligned_cols=350 Identities=77% Similarity=1.309 Sum_probs=295.3
Q ss_pred CcccceEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEe
Q 017793 11 DKNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEV 90 (366)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~v 90 (366)
+.++++++|+.++..+++++.|.|+++++||+||+.++++|++|+++..+... +.+...+|.++|+|++|+|+++
T Consensus 14 ~~~~~~~~~~~~~~~l~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~-----~~~~~~~p~~~G~e~~G~V~~v 88 (364)
T PLN02702 14 VEEENMAAWLVGVNTLKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRC-----ADFVVKEPMVIGHECAGIIEEV 88 (364)
T ss_pred cccccceEEEecCCceEEEeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCC-----ccccCCCCcccccceeEEEEEE
Confidence 55789999999999999999999999999999999999999999988773211 1112235788999999999999
Q ss_pred CCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccchhhH
Q 017793 91 GSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLS 170 (366)
Q Consensus 91 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~~~~ 170 (366)
|+++++|++||+|++.+..+|++|.+|..|..+.|++..+++.....|+|+||+.++.+.++++|+++++++++...+++
T Consensus 89 G~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~g~~~~y~~v~~~~~~~~P~~l~~~~aa~~~~~~ 168 (364)
T PLN02702 89 GSEVKHLVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPENVSLEEGAMCEPLS 168 (364)
T ss_pred CCCCCCCCCCCEEEEcCCCCCCCCcchhCcCcccCCCccccCCCCCCCcccceEEcchHHeEECCCCCCHHHHhhhhHHH
Confidence 99999999999999999999999999999999999986555433457999999999999999999999999988655666
Q ss_pred HHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHH
Q 017793 171 VGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQ 250 (366)
Q Consensus 171 ~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~ 250 (366)
++++++...+++++++|||+|+|++|++++|+|+..|+..++++++++++.++++++|++..+++.....++.+.+..+.
T Consensus 169 ~a~~~~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 248 (364)
T PLN02702 169 VGVHACRRANIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVLVSTNIEDVESEVEEIQ 248 (364)
T ss_pred HHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEecCcccccHHHHHHHHh
Confidence 78888877889999999999999999999999999999778888889999999999999988776544456666665554
Q ss_pred HhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeeccCCChHHHHHHHHCCCCC
Q 017793 251 NAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKID 330 (366)
Q Consensus 251 ~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~ 330 (366)
...++++|++||++|+...+..++++|+++|+++.+|........+......+++++.+++.....++.++++++++.+.
T Consensus 249 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~ 328 (364)
T PLN02702 249 KAMGGGIDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGHNEMTVPLTPAAAREVDVVGVFRYRNTWPLCLEFLRSGKID 328 (364)
T ss_pred hhcCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCCCcccHHHHHhCccEEEEeccChHHHHHHHHHHHcCCCC
Confidence 33456899999999977789999999999999999986543333445567788889998876667889999999999986
Q ss_pred CCCceEEEecCChhhHHHHHHHHHcCCCceEEEee
Q 017793 331 VKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 365 (366)
Q Consensus 331 ~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~ 365 (366)
+.+.+.+.|+++++++++|++.+.+++..+|+++.
T Consensus 329 ~~~~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~ 363 (364)
T PLN02702 329 VKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFN 363 (364)
T ss_pred chHheEEEeccChHHHHHHHHHHhcCCCceEEEEe
Confidence 55667788777668999999999998888999985
No 28
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=100.00 E-value=6.3e-46 Score=342.63 Aligned_cols=326 Identities=23% Similarity=0.333 Sum_probs=256.5
Q ss_pred cceEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCC
Q 017793 14 QNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE 93 (366)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~ 93 (366)
..+++++.+|+.++++++|.|. +++||+|||+++|||++|+++++|.+... .....+|.++|||++|+|+++|.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~----~~~~~~P~i~GhE~~G~V~~~g~~ 76 (341)
T cd08237 2 INQVYRLVRPKFFEVTYEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPE----ALKKKLPMALIHEGIGVVVSDPTG 76 (341)
T ss_pred cccceEEeccceEEEeecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcc----cccCCCCeeccceeEEEEEeeCCC
Confidence 3578888999999999999994 99999999999999999999988532100 001356999999999999998864
Q ss_pred CCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccchhhHHHH
Q 017793 94 VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGV 173 (366)
Q Consensus 94 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~~~~~a~ 173 (366)
.|++||||++.+..+|+. ..| +..++|+...+++. ..+|+|+||++++++.++++|+++++++|+.+.++++++
T Consensus 77 --~~~vGdrV~~~~~~~~~~-~~~--~~~~~c~~~~~~g~-~~~G~~aey~~v~~~~~~~vP~~l~~~~aa~~~~~~~a~ 150 (341)
T cd08237 77 --TYKVGTKVVMVPNTPVEK-DEI--IPENYLPSSRFRSS-GYDGFMQDYVFLPPDRLVKLPDNVDPEVAAFTELVSVGV 150 (341)
T ss_pred --ccCCCCEEEECCCCCchh-ccc--chhccCCCcceeEe-cCCCceEEEEEEchHHeEECCCCCChHHhhhhchHHHHH
Confidence 699999999988777763 344 35567877655542 246999999999999999999999999988777889999
Q ss_pred HHHHh---CCCCCCCEEEEECCCHHHHHHHHHHHH-CCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHH
Q 017793 174 HACRR---ANVGPETNVMIMGSGPIGLVTLLAARA-FGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKI 249 (366)
Q Consensus 174 ~~l~~---~~~~~~~~vlI~G~g~vG~~ai~la~~-~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~ 249 (366)
+++.. ..+++|++|||.|+|++|++++|+++. .|..+|++++.+++|++++++.+++..++ + +
T Consensus 151 ~a~~~~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~~~~~------~-------~ 217 (341)
T cd08237 151 HAISRFEQIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADETYLID------D-------I 217 (341)
T ss_pred HHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCceeehh------h-------h
Confidence 98843 457899999999999999999999996 66657999999999999998766542211 1 1
Q ss_pred HHhhCCCCcEEEEcCCC---hHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeecc-CCChHHHHHHHH
Q 017793 250 QNAMGSGIDVSFDCVGF---DKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLR 325 (366)
Q Consensus 250 ~~~~~~~~d~vld~~g~---~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~ 325 (366)
.+ ..++|+|||++|+ +..++.++++++++|+++.+|.......++...++.+++++.++... .+++++++++++
T Consensus 218 ~~--~~g~d~viD~~G~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~ 295 (341)
T cd08237 218 PE--DLAVDHAFECVGGRGSQSAINQIIDYIRPQGTIGLMGVSEYPVPINTRMVLEKGLTLVGSSRSTREDFERAVELLS 295 (341)
T ss_pred hh--ccCCcEEEECCCCCccHHHHHHHHHhCcCCcEEEEEeecCCCcccCHHHHhhCceEEEEecccCHHHHHHHHHHHH
Confidence 11 2369999999994 45789999999999999999976544455556677899999998765 467899999999
Q ss_pred CC---CCCCCCceEEEecCC-hhhHHHHHHHHHcCCCceEEEeeC
Q 017793 326 SG---KIDVKPLITHRFGFT-QKEIEDAFEISAQGGNAIKVMFNL 366 (366)
Q Consensus 326 ~g---~~~~~~~~~~~~~l~-~~~~~~a~~~~~~~~~~gkvvi~~ 366 (366)
++ ...+++.+++.|+++ ++++.++++...++ ..||+||++
T Consensus 296 ~~~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~-~~gKvvi~~ 339 (341)
T cd08237 296 RNPEVAEYLRKLVGGVFPVRSINDIHRAFESDLTN-SWGKTVMEW 339 (341)
T ss_pred hCCcccCChHHHhccccccccHHHHHHHHHHHhhc-CcceEEEEe
Confidence 99 334678888999881 23555555555544 689999864
No 29
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=5.1e-45 Score=338.66 Aligned_cols=329 Identities=23% Similarity=0.331 Sum_probs=270.4
Q ss_pred ceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCC
Q 017793 15 NMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE 93 (366)
Q Consensus 15 ~~~~~~~~~-~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~ 93 (366)
+++++..++ +.+.++++|.|+|+++||+|||.++|+|++|++.+.|.+ ....+|.++|||++|+|+++|++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~--------~~~~~p~i~G~E~~G~Vv~vG~~ 81 (357)
T PLN02514 10 TTGWAARDPSGHLSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDL--------GMSNYPMVPGHEVVGEVVEVGSD 81 (357)
T ss_pred EEEEEEecCCCCceEEeecCCCCCCCcEEEEEEEeccChHHHHhhcCCc--------CcCCCCccCCceeeEEEEEECCC
Confidence 778888888 579999999999999999999999999999999887421 11245889999999999999999
Q ss_pred CCCCCCCCEEEEcCCc-CCCCCccccCCCCCCCCCccccC------CCCCCCcceEEEEecCCceEECCCCCCccccccc
Q 017793 94 VKSLEVGDRVALEPGI-SCGHCSLCKAGSYNLCPEMRFFG------SPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC 166 (366)
Q Consensus 94 v~~~~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~ 166 (366)
+++|++||+|++.+.. +|++|.+|..+++++|++..+.. +....|+|+||+.++.+.++++|+++++++|+.+
T Consensus 82 v~~~~~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l 161 (357)
T PLN02514 82 VSKFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKFVVKIPEGMAPEQAAPL 161 (357)
T ss_pred cccccCCCEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCccCCCccccEEEEchHHeEECCCCCCHHHhhhh
Confidence 9999999999876543 69999999999999999863321 1124699999999999999999999999999877
Q ss_pred h-hhHHHHHHHHh-CCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHH-HHHHHcCCceeeecCCCCcchH
Q 017793 167 E-PLSVGVHACRR-ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRL-SIARNLGADETAKVSTDIEDVD 243 (366)
Q Consensus 167 ~-~~~~a~~~l~~-~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~-~~~~~lg~~~~~~~~~~~~~~~ 243 (366)
. .+.+||+++.. ...++|++++|+|+|++|++++|+||..|+ .+++++.++++. ..++++|++.++++.. .
T Consensus 162 ~~~~~ta~~al~~~~~~~~g~~vlV~G~G~vG~~av~~Ak~~G~-~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~--~--- 235 (357)
T PLN02514 162 LCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSDKKREEALEHLGADDYLVSSD--A--- 235 (357)
T ss_pred hhhHHHHHHHHHHcccCCCCCeEEEEcccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhcCCcEEecCCC--h---
Confidence 5 67888998865 445799999999999999999999999999 466666666555 4556799987765322 1
Q ss_pred HHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeecc-CCChHHHHH
Q 017793 244 TDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIE 322 (366)
Q Consensus 244 ~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 322 (366)
..+.+. ..++|++|||+|....+..++++++++|+++.+|.......+....+..++.++.+++.. ..+++++++
T Consensus 236 ~~~~~~----~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ 311 (357)
T PLN02514 236 AEMQEA----ADSLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTPLQFVTPMLMLGRKVITGSFIGSMKETEEMLE 311 (357)
T ss_pred HHHHHh----cCCCcEEEECCCchHHHHHHHHHhccCCEEEEECCCCCCCcccHHHHhhCCcEEEEEecCCHHHHHHHHH
Confidence 223332 247999999999777889999999999999999976544455566677888999998766 447899999
Q ss_pred HHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793 323 FLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 366 (366)
Q Consensus 323 ~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~ 366 (366)
++++|++ ++.+ +.|+| +++.+|++.+.++...||+++.+
T Consensus 312 ~~~~g~l--~~~i-~~~~l--~~~~~A~~~~~~~~~~gk~v~~~ 350 (357)
T PLN02514 312 FCKEKGL--TSMI-EVVKM--DYVNTAFERLEKNDVRYRFVVDV 350 (357)
T ss_pred HHHhCCC--cCcE-EEEcH--HHHHHHHHHHHcCCCceeEEEEc
Confidence 9999987 5555 57898 99999999999998889999864
No 30
>PRK10083 putative oxidoreductase; Provisional
Probab=100.00 E-value=1.6e-44 Score=333.88 Aligned_cols=335 Identities=27% Similarity=0.526 Sum_probs=279.8
Q ss_pred ceEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCCC
Q 017793 15 NMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEV 94 (366)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v 94 (366)
||++++.+++.++++++|.|.|+++|++||+.++++|++|++...|.. .....|.++|||++|+|+++|+++
T Consensus 1 m~a~~~~~~~~~~~~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~--------~~~~~p~i~G~e~~G~V~~vG~~v 72 (339)
T PRK10083 1 MKSIVIEKPNSLAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHN--------PFAKYPRVIGHEFFGVIDAVGEGV 72 (339)
T ss_pred CeEEEEecCCeeEEEeccCCCCCCCeEEEEEEEEEEcccchHHHcCCC--------CcCCCCcccccceEEEEEEECCCC
Confidence 578888888999999999999999999999999999999998877321 012458899999999999999999
Q ss_pred CCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccchhhHHHHH
Q 017793 95 KSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVH 174 (366)
Q Consensus 95 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~~~~~a~~ 174 (366)
+.|++||+|++.+..+|+.|.+|..+++++|+++.+++. ..+|+|+||+.++.+.++++|+++++++++...++.+++.
T Consensus 73 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~ip~~~~~~~a~~~~~~~~a~~ 151 (339)
T PRK10083 73 DAARIGERVAVDPVISCGHCYPCSIGKPNVCTSLVVLGV-HRDGGFSEYAVVPAKNAHRIPDAIADQYAVMVEPFTIAAN 151 (339)
T ss_pred ccCCCCCEEEEccccCCCCCccccCcCcccCCCCceEEE-ccCCcceeeEEechHHeEECcCCCCHHHHhhhchHHHHHH
Confidence 999999999999999999999999999999998776543 3479999999999999999999999988875557778887
Q ss_pred HHHhCCCCCCCEEEEECCCHHHHHHHHHHHH-CCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhh
Q 017793 175 ACRRANVGPETNVMIMGSGPIGLVTLLAARA-FGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM 253 (366)
Q Consensus 175 ~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~-~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (366)
++...++++|++|||+|+|++|++++|+|+. +|+..++++++++++.++++++|++.++++.. .++.+.+.. .
T Consensus 152 ~~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~--~~~~~~~~~----~ 225 (339)
T PRK10083 152 VTGRTGPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQ--EPLGEALEE----K 225 (339)
T ss_pred HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCcc--ccHHHHHhc----C
Confidence 6677889999999999999999999999996 69977888999999999999999998877543 344444421 1
Q ss_pred CCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeeccCCChHHHHHHHHCCCCCCCC
Q 017793 254 GSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKP 333 (366)
Q Consensus 254 ~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~ 333 (366)
+.++|++||++|++..+..++++|+++|+++.+|............+..+.+++.+.....+.+++++++++++.+.+..
T Consensus 226 g~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 305 (339)
T PRK10083 226 GIKPTLIIDAACHPSILEEAVTLASPAARIVLMGFSSEPSEIVQQGITGKELSIFSSRLNANKFPVVIDWLSKGLIDPEK 305 (339)
T ss_pred CCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCceecHHHHhhcceEEEEEecChhhHHHHHHHHHcCCCChHH
Confidence 34567999999987789999999999999999986543333333344556777777665567899999999999996544
Q ss_pred ceEEEecCChhhHHHHHHHHHcC-CCceEEEeeC
Q 017793 334 LITHRFGFTQKEIEDAFEISAQG-GNAIKVMFNL 366 (366)
Q Consensus 334 ~~~~~~~l~~~~~~~a~~~~~~~-~~~gkvvi~~ 366 (366)
.+++.|++ +++++|++.+.++ ...+|+++++
T Consensus 306 ~~~~~~~l--~~~~~a~~~~~~~~~~~~kvvv~~ 337 (339)
T PRK10083 306 LITHTFDF--QHVADAIELFEKDQRHCCKVLLTF 337 (339)
T ss_pred heeeeecH--HHHHHHHHHHhcCCCceEEEEEec
Confidence 57788998 9999999999865 4578999864
No 31
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=100.00 E-value=5.2e-44 Score=333.14 Aligned_cols=336 Identities=32% Similarity=0.548 Sum_probs=280.0
Q ss_pred eEEEEeeCC-ceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCcc-CCCCcccccceeEEEEEeCCC
Q 017793 16 MAAWLLGIK-TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFI-VKKPMVIGHECAGIIEEVGSE 93 (366)
Q Consensus 16 ~~~~~~~~~-~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~-~~~p~i~G~e~~G~V~~vG~~ 93 (366)
|++++.+++ .+++++.|.|.|+++||+|||.++++|++|+....|. .+ ..+|.++|+|++|+|+++|++
T Consensus 2 ka~~~~~~~~~l~~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~---------~~~~~~p~~~G~e~~G~V~~vG~~ 72 (361)
T cd08231 2 RAAVLTGPGKPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGR---------RPRVPLPIILGHEGVGRVVALGGG 72 (361)
T ss_pred eEEEEcCCCCCCEEEeccCCCCCCCeEEEEEEEEeecCccHHHhcCC---------CCCCCCCcccccCCceEEEEeCCC
Confidence 677888775 8999999999999999999999999999999888742 22 456889999999999999999
Q ss_pred CCC------CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCC------CCCCcceEEEEecCC-ceEECCCCCCc
Q 017793 94 VKS------LEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSP------PTNGSLAHKVVHPAK-LCYKLPDNVSL 160 (366)
Q Consensus 94 v~~------~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~g~~~e~~~~~~~-~~~~~P~~~~~ 160 (366)
++. |++||+|++.+..+|++|.+|+.++++.|+...+++.. ...|+|+||+.++++ .++++|++++.
T Consensus 73 v~~~~~~~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~lP~~~~~ 152 (361)
T cd08231 73 VTTDVAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPPGTAIVRVPDNVPD 152 (361)
T ss_pred ccccccCCccCCCCEEEEcccCCCCCChhHhCcCccccccchhccccccccCCCCCcccceEEEecCCCceEECCCCCCH
Confidence 986 99999999999899999999999999999987665531 246999999999986 79999999998
Q ss_pred cccccc-hhhHHHHHHHHh-CCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCC
Q 017793 161 EEGAMC-EPLSVGVHACRR-ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTD 238 (366)
Q Consensus 161 ~~aa~~-~~~~~a~~~l~~-~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~ 238 (366)
++++++ .++.+||+++.+ ...+++++|||+|+|++|++++|+|+.+|+..++++++++++.++++++|++.++++...
T Consensus 153 ~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~ 232 (361)
T cd08231 153 EVAAPANCALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADATIDIDEL 232 (361)
T ss_pred HHHHHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCCeEEcCccc
Confidence 888877 588999999966 445699999999999999999999999999668888899999999999999888775432
Q ss_pred C-cchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCC--ceeechHhhhcCcEEEEeecc-C
Q 017793 239 I-EDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE--MTVALTPAAAREVDVIGIFRY-R 314 (366)
Q Consensus 239 ~-~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~-~ 314 (366)
. .++...+.++. .+.++|++|||+|+...+..++++++++|+++.+|..... ..++...++.+++++.+++.. .
T Consensus 233 ~~~~~~~~i~~~~--~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (361)
T cd08231 233 PDPQRRAIVRDIT--GGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPAGTVPLDPERIVRKNLTIIGVHNYDP 310 (361)
T ss_pred ccHHHHHHHHHHh--CCCCCcEEEECCCChHHHHHHHHHhccCCEEEEEcCCCCCCccccCHHHHhhcccEEEEcccCCc
Confidence 1 11223343332 3568999999999877888999999999999999865432 233334567888999888765 6
Q ss_pred CChHHHHHHHHCC--CCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEee
Q 017793 315 STWPLCIEFLRSG--KIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 365 (366)
Q Consensus 315 ~~~~~~~~~l~~g--~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~ 365 (366)
++++++++++.++ .+.+.+.++++|++ +++++|++.++++. .+|++|+
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~l--~~~~~a~~~~~~~~-~~k~vi~ 360 (361)
T cd08231 311 SHLYRAVRFLERTQDRFPFAELVTHRYPL--EDINEALELAESGT-ALKVVID 360 (361)
T ss_pred hhHHHHHHHHHhccCcCCchhheeeeeeH--HHHHHHHHHHHcCC-ceEEEeC
Confidence 6899999999998 55567778899999 99999999998876 5899986
No 32
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=100.00 E-value=2.3e-44 Score=327.58 Aligned_cols=306 Identities=20% Similarity=0.271 Sum_probs=247.3
Q ss_pred cceEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeeec-cchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCC
Q 017793 14 QNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGIC-GSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGS 92 (366)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlVkv~a~~i~-~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~ 92 (366)
+++++++.+++.+++++.|.|+|+++||+|||.++||| .+|++++.|.+... ....+|.++|||++|+|+++|+
T Consensus 1 ~~ka~~~~~~~~l~~~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~-----~~~~~P~i~GhE~~G~V~~vG~ 75 (308)
T TIGR01202 1 KTQAIVLSGPNQIELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPF-----PGMGYPLVPGYESVGRVVEAGP 75 (308)
T ss_pred CceEEEEeCCCeEEEEEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCC-----CCCCCCccCcceeEEEEEEecC
Confidence 47888898888999999999999999999999999997 69998887532110 0125699999999999999999
Q ss_pred CCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccchhhHHH
Q 017793 93 EVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVG 172 (366)
Q Consensus 93 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~~~~~a 172 (366)
++ +|++||||++.+ ..|..|. ....|+|+||++++++.++++|++++++. +.+.+.++|
T Consensus 76 ~v-~~~vGdrV~~~~----~~c~~~~---------------~~~~G~~aey~~v~~~~~~~ip~~~~~~~-a~~~~~~~a 134 (308)
T TIGR01202 76 DT-GFRPGDRVFVPG----SNCYEDV---------------RGLFGGASKRLVTPASRVCRLDPALGPQG-ALLALAATA 134 (308)
T ss_pred CC-CCCCCCEEEEeC----ccccccc---------------cccCCcccceEEcCHHHceeCCCCCCHHH-HhhhHHHHH
Confidence 98 599999998732 1222211 01369999999999999999999999764 555567899
Q ss_pred HHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHh
Q 017793 173 VHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNA 252 (366)
Q Consensus 173 ~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~ 252 (366)
|++++... .+++++||+|+|++|++++|+||.+|++.|++++.+++|.+.++++ .++++.. .
T Consensus 135 ~~~~~~~~-~~~~~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~~---~~i~~~~---~----------- 196 (308)
T TIGR01202 135 RHAVAGAE-VKVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATGY---EVLDPEK---D----------- 196 (308)
T ss_pred HHHHHhcc-cCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhhc---cccChhh---c-----------
Confidence 99987653 4689999999999999999999999997788888888887766543 2333211 0
Q ss_pred hCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeecc-CCChHHHHHHHHCCCCCC
Q 017793 253 MGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDV 331 (366)
Q Consensus 253 ~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~ 331 (366)
.+.++|++|||+|+...++.++++++++|+++.+|.......++...++.+++++.++..+ .++++++++++++|++.+
T Consensus 197 ~~~g~Dvvid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~g~i~~ 276 (308)
T TIGR01202 197 PRRDYRAIYDASGDPSLIDTLVRRLAKGGEIVLAGFYTEPVNFDFVPAFMKEARLRIAAEWQPGDLHAVRELIESGALSL 276 (308)
T ss_pred cCCCCCEEEECCCCHHHHHHHHHhhhcCcEEEEEeecCCCcccccchhhhcceEEEEecccchhHHHHHHHHHHcCCCCh
Confidence 1467999999999887889999999999999999976544455566677788888887765 567999999999999988
Q ss_pred CCceEEEecCChhhHHHHHHHHHcCCCceEEEee
Q 017793 332 KPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 365 (366)
Q Consensus 332 ~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~ 365 (366)
.+.+++.|+| +++++|++.+.++...+|++++
T Consensus 277 ~~~it~~~~l--~~~~~A~~~~~~~~~~~Kv~~~ 308 (308)
T TIGR01202 277 DGLITHQRPA--SDAAEAYMTAFSDPDCLKMILD 308 (308)
T ss_pred hhccceeecH--HHHHHHHHHHhcCcCceEEEeC
Confidence 8889999999 9999999998877778999974
No 33
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=100.00 E-value=9.8e-44 Score=335.76 Aligned_cols=334 Identities=22% Similarity=0.331 Sum_probs=264.6
Q ss_pred ccceEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeeeccchhhhh-hhcccccccccCccCCCCcccccceeEEEEEeC
Q 017793 13 NQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHF-KVKKLSTMRCANFIVKKPMVIGHECAGIIEEVG 91 (366)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~-~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG 91 (366)
+.|+++++.++..++++++|.|+|+++||+|||.++|||++|++.+ .|..... . ......+|.++|||++|+|+++|
T Consensus 1 m~~~a~~~~~~~~l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~-~-~~~~~~~p~i~GhE~~G~V~~vG 78 (410)
T cd08238 1 MKTKAWRMYGKGDLRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKK-V-PNDLAKEPVILGHEFAGTILKVG 78 (410)
T ss_pred CCcEEEEEEcCCceEEEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCcccc-C-cccccCCCceeccccEEEEEEeC
Confidence 3588999999989999999999999999999999999999999876 3321100 0 00012468899999999999999
Q ss_pred CCCC-CCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCC----ceEECCCCCCccccccc
Q 017793 92 SEVK-SLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAK----LCYKLPDNVSLEEGAMC 166 (366)
Q Consensus 92 ~~v~-~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~----~~~~~P~~~~~~~aa~~ 166 (366)
++++ +|++||||++.+...|+.|..|. .+ + ...+|+|+||++++.+ .++++|+++++++|+.+
T Consensus 79 ~~v~~~~~vGdrV~~~~~~~c~~~~~c~--------~~---g-~~~~G~~aey~~v~~~~~~~~~~~lP~~l~~~~aal~ 146 (410)
T cd08238 79 KKWQGKYKPGQRFVIQPALILPDGPSCP--------GY---S-YTYPGGLATYHIIPNEVMEQDCLLIYEGDGYAEASLV 146 (410)
T ss_pred CCccCCCCCCCEEEEcCCcCCCCCCCCC--------Cc---c-ccCCCcceEEEEecHHhccCCeEECCCCCCHHHHhhc
Confidence 9998 69999999998887888776652 11 1 1247999999999987 58999999999999866
Q ss_pred hhhHHH---HHHH---------HhCCCCCCCEEEEEC-CCHHHHHHHHHHHHCC--CCeEEEEcCChhHHHHHHHc----
Q 017793 167 EPLSVG---VHAC---------RRANVGPETNVMIMG-SGPIGLVTLLAARAFG--APRIIITDVDVQRLSIARNL---- 227 (366)
Q Consensus 167 ~~~~~a---~~~l---------~~~~~~~~~~vlI~G-~g~vG~~ai~la~~~g--~~~vv~v~~~~~~~~~~~~l---- 227 (366)
.+++++ +.++ +++++++|++|+|+| +|++|++++|+|+.+| +.+|++++.+++|.++++++
T Consensus 147 epl~~~~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~ 226 (410)
T cd08238 147 EPLSCVIGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPE 226 (410)
T ss_pred chHHHHHHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhcccc
Confidence 443332 3222 346789999999997 7999999999999975 45799999999999999997
Q ss_pred ----CCc-eeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEccc-CC--CceeechH
Q 017793 228 ----GAD-ETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLA-KT--EMTVALTP 299 (366)
Q Consensus 228 ----g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~-~~--~~~~~~~~ 299 (366)
|++ .++++.. ..++.+.++++. .+.++|++||++|.+..+..++++++++|+++.++.. .. ...++...
T Consensus 227 ~~~~Ga~~~~i~~~~-~~~~~~~v~~~t--~g~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~~~g~~~~~~~~~~~~~~ 303 (410)
T cd08238 227 AASRGIELLYVNPAT-IDDLHATLMELT--GGQGFDDVFVFVPVPELVEEADTLLAPDGCLNFFAGPVDKNFSAPLNFYN 303 (410)
T ss_pred ccccCceEEEECCCc-cccHHHHHHHHh--CCCCCCEEEEcCCCHHHHHHHHHHhccCCeEEEEEccCCCCccccccHHH
Confidence 665 3454322 245666665553 3568999999999888899999999999988776432 21 23455567
Q ss_pred hhhcCcEEEEeecc-CCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793 300 AAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 366 (366)
Q Consensus 300 ~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~ 366 (366)
+..+++++.|++.. ..+++++++++++|++++.+.++++|+| +++++|++.+. ++..||+|+..
T Consensus 304 ~~~~~~~i~g~~~~~~~~~~~~~~li~~g~i~~~~~it~~~~l--~~~~~A~~~~~-~~~~gKvvl~~ 368 (410)
T cd08238 304 VHYNNTHYVGTSGGNTDDMKEAIDLMAAGKLNPARMVTHIGGL--NAAAETTLNLP-GIPGGKKLIYT 368 (410)
T ss_pred hhhcCcEEEEeCCCCHHHHHHHHHHHHcCCCchhhcEEEEecH--HHHHHHHHHhh-ccCCceEEEEC
Confidence 78899999998765 5679999999999999888899999999 99999999999 77889999863
No 34
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=100.00 E-value=2.8e-43 Score=326.84 Aligned_cols=344 Identities=29% Similarity=0.534 Sum_probs=282.7
Q ss_pred ceEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccc-cCccCCCCcccccceeEEEEEeCCC
Q 017793 15 NMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRC-ANFIVKKPMVIGHECAGIIEEVGSE 93 (366)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~-~~~~~~~p~i~G~e~~G~V~~vG~~ 93 (366)
||+++++++.++++++.|.|+++++||+||+.++++|+.|+.+..|........ ......+|.++|+|++|+|+++|++
T Consensus 1 mka~~~~~~~~~~~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~ 80 (350)
T cd08256 1 MRAVVCHGPQDYRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVELGEG 80 (350)
T ss_pred CeeEEEecCCceEEEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEEeCCC
Confidence 688999988889999999999999999999999999999999887532100000 0000246778999999999999999
Q ss_pred CC--CCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCC-CCCCCcceEEEEecCC-ceEECCCCCCccccccchhh
Q 017793 94 VK--SLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGS-PPTNGSLAHKVVHPAK-LCYKLPDNVSLEEGAMCEPL 169 (366)
Q Consensus 94 v~--~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~e~~~~~~~-~~~~~P~~~~~~~aa~~~~~ 169 (366)
++ +|++||+|++.+..+|+.|.+|..+....|+...+++. ....|+|+||+.++++ .++++|+++++++++.+.++
T Consensus 81 v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~lP~~~~~~~aa~~~~~ 160 (350)
T cd08256 81 AEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVNGGMAEYMRFPKEAIVHKVPDDIPPEDAILIEPL 160 (350)
T ss_pred cccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccceeeccCCCCcceeeEEcccccceEECCCCCCHHHHhhhhHH
Confidence 99 89999999999999999999999999999987655443 1257999999999988 67999999999888877788
Q ss_pred HHHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHH
Q 017793 170 SVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKI 249 (366)
Q Consensus 170 ~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~ 249 (366)
.++|++++..+++++++|||.|+|++|++++|+|+.+|+..++++++++++.++++++|++.++++. ..++...+.++
T Consensus 161 ~ta~~a~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~v~~~~--~~~~~~~~~~~ 238 (350)
T cd08256 161 ACALHAVDRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALARKFGADVVLNPP--EVDVVEKIKEL 238 (350)
T ss_pred HHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHHcCCcEEecCC--CcCHHHHHHHH
Confidence 8999988778899999999988999999999999999997788999999999999999998876643 34566666554
Q ss_pred HHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHh-hhcCcEEEEeeccCCChHHHHHHHHCCC
Q 017793 250 QNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPA-AAREVDVIGIFRYRSTWPLCIEFLRSGK 328 (366)
Q Consensus 250 ~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~g~ 328 (366)
. .+.++|++||++|+...+..++++++++|+++.+|........+...+ ..+++++.++......+++++++++++.
T Consensus 239 ~--~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~ 316 (350)
T cd08256 239 T--GGYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGDPVTVDWSIIGDRKELDVLGSHLGPYCYPIAIDLIASGR 316 (350)
T ss_pred h--CCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEccCCCCCccChhHhhcccccEEEEeccCchhHHHHHHHHHcCC
Confidence 3 356799999999976678889999999999999986543333333322 3456777777666677999999999999
Q ss_pred CCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEe
Q 017793 329 IDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF 364 (366)
Q Consensus 329 ~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi 364 (366)
+.+.+.+.+.|++ +++++|++.++++...+|+++
T Consensus 317 l~~~~~~~~~~~l--~~~~~a~~~~~~~~~~~kvv~ 350 (350)
T cd08256 317 LPTDGIVTHQFPL--EDFEEAFELMARGDDSIKVVL 350 (350)
T ss_pred CChhHheEEEeEH--HHHHHHHHHHHhCCCceEEeC
Confidence 9655456788999 999999999999988899875
No 35
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=3.9e-43 Score=326.00 Aligned_cols=338 Identities=27% Similarity=0.369 Sum_probs=276.9
Q ss_pred ceEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCCC
Q 017793 15 NMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEV 94 (366)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v 94 (366)
||++++.+++.+++++.|.|.+.++||+|||.++++|++|++...+.+ .....|.++|||++|+|+++|+++
T Consensus 1 mka~~~~~~~~~~l~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~--------~~~~~~~~~G~e~~G~V~~vG~~v 72 (351)
T cd08285 1 MKAFAMLGIGKVGWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGA--------PGERHGMILGHEAVGVVEEVGSEV 72 (351)
T ss_pred CceEEEccCCccEEEECCCCCCCCCeEEEEEEEEEechhhHHHhcCCC--------CCCCCCcccCcceEEEEEEecCCc
Confidence 688999888889999999999999999999999999999998776321 113458899999999999999999
Q ss_pred CCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcc--ccCCCCCCCcceEEEEecCC--ceEECCCCCCccccccch-hh
Q 017793 95 KSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMR--FFGSPPTNGSLAHKVVHPAK--LCYKLPDNVSLEEGAMCE-PL 169 (366)
Q Consensus 95 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~e~~~~~~~--~~~~~P~~~~~~~aa~~~-~~ 169 (366)
++|++||+|++.+..+|++|..|..|+++.|+... +.-.....|+|+||+.++.+ .++++|+++++++++.+. .+
T Consensus 73 ~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~~~lP~~~~~~~aa~~~~~~ 152 (351)
T cd08285 73 KDFKPGDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKDGVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMM 152 (351)
T ss_pred CccCCCCEEEEcCcCCCCCCHHHHCcCcccCcCCCCCccccCCCCcceeEEEEcchhhCceEECCCCCCHHHhhhhccch
Confidence 99999999999888899999999999999998742 11112247999999999974 899999999999998774 78
Q ss_pred HHHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHH
Q 017793 170 SVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKI 249 (366)
Q Consensus 170 ~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~ 249 (366)
.+|++++...+++++++|||+|+|++|++++|+|+.+|+..++++++++++.++++++|++.++++.. .++...+.++
T Consensus 153 ~ta~~~~~~~~~~~g~~vlI~g~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~--~~~~~~i~~~ 230 (351)
T cd08285 153 STGFHGAELANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYKN--GDVVEQILKL 230 (351)
T ss_pred hhHHHHHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCceEecCCC--CCHHHHHHHH
Confidence 88999887788999999999999999999999999999977899999999999999999988877543 4565665554
Q ss_pred HHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeech--H--hhhcCcEEEEeecc--CCChHHHHHH
Q 017793 250 QNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALT--P--AAAREVDVIGIFRY--RSTWPLCIEF 323 (366)
Q Consensus 250 ~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~--~--~~~~~~~~~~~~~~--~~~~~~~~~~ 323 (366)
. .+.++|++|||+|+...+..++++|+++|+++.+|........... . ...+..++.+.+.. .+++++++++
T Consensus 231 ~--~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 308 (351)
T cd08285 231 T--GGKGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLCPGGRLRMERLASL 308 (351)
T ss_pred h--CCCCCcEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCCceeecChhhhhhhccccEEEEeecCCccccHHHHHHH
Confidence 3 3568999999999877889999999999999999865532222211 1 22344556655432 5689999999
Q ss_pred HHCCCCCCCC-ceEEEecCChhhHHHHHHHHHcCC-CceEEEeeC
Q 017793 324 LRSGKIDVKP-LITHRFGFTQKEIEDAFEISAQGG-NAIKVMFNL 366 (366)
Q Consensus 324 l~~g~~~~~~-~~~~~~~l~~~~~~~a~~~~~~~~-~~gkvvi~~ 366 (366)
+++|++.+.. ...+.|++ +++++|++.+.++. ..+|++|++
T Consensus 309 ~~~g~i~~~~~~~~~~~~l--~~~~~a~~~~~~~~~~~~k~~~~~ 351 (351)
T cd08285 309 IEYGRVDPSKLLTHHFFGF--DDIEEALMLMKDKPDDLIKPVIIF 351 (351)
T ss_pred HHcCCCChhhceeccccCH--HHHHHHHHHHhcccCCeEEEEEeC
Confidence 9999996633 34456888 99999999999886 478999874
No 36
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=100.00 E-value=1.5e-42 Score=323.91 Aligned_cols=337 Identities=26% Similarity=0.432 Sum_probs=274.7
Q ss_pred ceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCC
Q 017793 15 NMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE 93 (366)
Q Consensus 15 ~~~~~~~~~-~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~ 93 (366)
+|++|+..+ +.++++++|.|++.++||+||+.++|+|++|++...|. ....+|.++|||++|+|+++|++
T Consensus 8 ~~a~~~~~~~~~~~l~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~---------~~~~~p~v~G~e~~G~V~~vG~~ 78 (373)
T cd08299 8 CKAAVLWEPKKPFSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGK---------LVTPFPVILGHEAAGIVESVGEG 78 (373)
T ss_pred eEEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEcCcccHHHhcCC---------CCCCCCccccccceEEEEEeCCC
Confidence 788888865 57899999999999999999999999999999988742 22346889999999999999999
Q ss_pred CCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCC--------------------CCCCCcceEEEEecCCceEE
Q 017793 94 VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGS--------------------PPTNGSLAHKVVHPAKLCYK 153 (366)
Q Consensus 94 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~g~~~e~~~~~~~~~~~ 153 (366)
++.|++||+|++.+..+||+|.+|..++++.|+.....+. ....|+|+||++++.+.+++
T Consensus 79 v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~ 158 (373)
T cd08299 79 VTTVKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAK 158 (373)
T ss_pred CccCCCCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcccceEEecccceee
Confidence 9999999999999889999999999999999997653210 00368999999999999999
Q ss_pred CCCCCCccccccch-hhHHHHHHH-HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCce
Q 017793 154 LPDNVSLEEGAMCE-PLSVGVHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE 231 (366)
Q Consensus 154 ~P~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~ 231 (366)
+|+++++++++.+. .+.+||+++ ..++++++++|||+|+|++|++++++|+..|+..|+++++++++.+.++++|++.
T Consensus 159 lP~~l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~lGa~~ 238 (373)
T cd08299 159 IDAAAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATE 238 (373)
T ss_pred CCCCCChHHhheeccchHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCce
Confidence 99999999998876 788899886 5688999999999999999999999999999967888889999999999999988
Q ss_pred eeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhh-cCCceEEEEcccCCCceeechH-hhhcCcEEEE
Q 017793 232 TAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNAT-RPGGKVCLIGLAKTEMTVALTP-AAAREVDVIG 309 (366)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l-~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~~~~ 309 (366)
+++......++...+.++. ++++|+++||+|++..+..++..+ .++|+++.+|............ .+.++.++.+
T Consensus 239 ~i~~~~~~~~~~~~v~~~~---~~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~ 315 (373)
T cd08299 239 CINPQDYKKPIQEVLTEMT---DGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSSQNLSINPMLLLTGRTWKG 315 (373)
T ss_pred EecccccchhHHHHHHHHh---CCCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCCCceeecCHHHHhcCCeEEE
Confidence 8775433333555555543 358999999999866777766655 6799999998654322233222 2345677777
Q ss_pred eecc----CCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793 310 IFRY----RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 366 (366)
Q Consensus 310 ~~~~----~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~ 366 (366)
++.. ...+.++++++.++.+.+.+.+++.|++ +++.+|++.+++++. .|+++++
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~e~~~a~~~~~~~~~-~k~~~~~ 373 (373)
T cd08299 316 AVFGGWKSKDSVPKLVADYMAKKFNLDPLITHTLPF--EKINEGFDLLRSGKS-IRTVLTF 373 (373)
T ss_pred EEecCCccHHHHHHHHHHHHcCCCCchhheeeeecH--HHHHHHHHHHhCCCc-ceEEEeC
Confidence 6543 2467778888888877767778899999 999999999987754 5888764
No 37
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=100.00 E-value=1.1e-42 Score=320.70 Aligned_cols=329 Identities=23% Similarity=0.384 Sum_probs=279.1
Q ss_pred ceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCC
Q 017793 15 NMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE 93 (366)
Q Consensus 15 ~~~~~~~~~-~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~ 93 (366)
|+++++.++ +.++++++|.|+++++||+||+.++++|++|+..+.|.. .....|.++|||++|+|+++|++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~--------~~~~~p~~~g~e~~G~v~~vG~~ 72 (333)
T cd08296 1 YKAVQVTEPGGPLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAM--------PGLSYPRVPGHEVVGRIDAVGEG 72 (333)
T ss_pred CeEEEEccCCCCceEEeccCCCCCCCEEEEEEEEEecchHHHHHHhCCC--------CCCCCCcccCcceeEEEEEECCC
Confidence 689999988 689999999999999999999999999999998887421 01345789999999999999999
Q ss_pred CCCCCCCCEEEEcC-CcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhHH
Q 017793 94 VKSLEVGDRVALEP-GISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSV 171 (366)
Q Consensus 94 v~~~~~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~~ 171 (366)
++.|++||+|++.+ ...|++|.+|..|+++.|++..+.+. ...|+|+||+.++.+.++++|+++++++++.+. .+.+
T Consensus 73 v~~~~~Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~~~-~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~t 151 (333)
T cd08296 73 VSRWKVGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGV-TRDGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVT 151 (333)
T ss_pred CccCCCCCEEEeccccCCCCCChhhhCcCcccCCCCCccCc-ccCCcceeEEEEchhheEeCCCCCCHHHhhhhhhhhHH
Confidence 99999999999865 35799999999999999998765543 346999999999999999999999998888665 7788
Q ss_pred HHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHH
Q 017793 172 GVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN 251 (366)
Q Consensus 172 a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~ 251 (366)
||++++...++++++|||+|+|++|++++|+|+.+|+ .++++++++++.++++++|++.++++.. .++...+..+
T Consensus 152 a~~~~~~~~~~~~~~vlV~g~g~iG~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~--~~~~~~~~~~-- 226 (333)
T cd08296 152 TFNALRNSGAKPGDLVAVQGIGGLGHLAVQYAAKMGF-RTVAISRGSDKADLARKLGAHHYIDTSK--EDVAEALQEL-- 226 (333)
T ss_pred HHHHHHhcCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHcCCcEEecCCC--ccHHHHHHhc--
Confidence 8988877789999999999999999999999999999 6888888999999999999988877533 3455544432
Q ss_pred hhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeecc-CCChHHHHHHHHCCCCC
Q 017793 252 AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKID 330 (366)
Q Consensus 252 ~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~ 330 (366)
+++|+++|+.|....+..++++++++|+++.+|......+++...++.+++++.+.... ..++++++++++++.+
T Consensus 227 ---~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l- 302 (333)
T cd08296 227 ---GGAKLILATAPNAKAISALVGGLAPRGKLLILGAAGEPVAVSPLQLIMGRKSIHGWPSGTALDSEDTLKFSALHGV- 302 (333)
T ss_pred ---CCCCEEEECCCchHHHHHHHHHcccCCEEEEEecCCCCCCcCHHHHhhcccEEEEeCcCCHHHHHHHHHHHHhCCC-
Confidence 46999999997677889999999999999999876544445555566889999998754 5678889999998887
Q ss_pred CCCceEEEecCChhhHHHHHHHHHcCCCceEEEee
Q 017793 331 VKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 365 (366)
Q Consensus 331 ~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~ 365 (366)
++.+ +.|++ +++.+|++.+.+++..||+|++
T Consensus 303 -~~~v-~~~~~--~~~~~a~~~~~~~~~~gk~v~~ 333 (333)
T cd08296 303 -RPMV-ETFPL--EKANEAYDRMMSGKARFRVVLT 333 (333)
T ss_pred -CceE-EEEEH--HHHHHHHHHHHCCCCceeEEeC
Confidence 4444 67888 9999999999999999999875
No 38
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=1.5e-42 Score=321.12 Aligned_cols=338 Identities=52% Similarity=0.953 Sum_probs=281.3
Q ss_pred EEEEeeCCceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCCCCC
Q 017793 17 AAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKS 96 (366)
Q Consensus 17 ~~~~~~~~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~ 96 (366)
+.|+.+++.+++++.|.|.+.++||+|||.++++|+.|++.+.+.. .+......|.++|+|++|+|+++|+++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~-----~~~~~~~~~~~~g~e~~G~V~~vG~~v~~ 75 (343)
T cd05285 1 AAVLHGPGDLRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGR-----IGDFVVKEPMVLGHESAGTVVAVGSGVTH 75 (343)
T ss_pred CceEecCCceeEEECCCCCCCCCeEEEEEEEeeEccccHHHHccCC-----CcccCCCCCcccCcceeEEEEeeCCCCCC
Confidence 4678888999999999999999999999999999999998664110 01112235778999999999999999999
Q ss_pred CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccchhhHHHHHHH
Q 017793 97 LEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHAC 176 (366)
Q Consensus 97 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~~~~~a~~~l 176 (366)
|++||+|++.+..+|+.|.+|..|+..+|+++.+++.....|+|++|++++++.++++|+++++++|+.+.++.+|++++
T Consensus 76 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~~~~~~a~~~~ 155 (343)
T cd05285 76 LKVGDRVAIEPGVPCRTCEFCKSGRYNLCPDMRFAATPPVDGTLCRYVNHPADFCHKLPDNVSLEEGALVEPLSVGVHAC 155 (343)
T ss_pred CCCCCEEEEccccCCCCChhHhCcCcccCcCccccccccCCCceeeeEEecHHHcEECcCCCCHHHhhhhhHHHHHHHHH
Confidence 99999999999999999999999999999986554433457999999999999999999999999998777788898888
Q ss_pred HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcc---hHHHHHHHHHhh
Q 017793 177 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIED---VDTDVGKIQNAM 253 (366)
Q Consensus 177 ~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~---~~~~~~~~~~~~ 253 (366)
+.+++++++++||+|+|++|++++|+|+.+|+..++++++++++.++++++|++.++++.. .+ +...+.+.. .
T Consensus 156 ~~~~~~~g~~vlI~g~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~--~~~~~~~~~~~~~~--~ 231 (343)
T cd05285 156 RRAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRT--EDTPESAEKIAELL--G 231 (343)
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEecccc--ccchhHHHHHHHHh--C
Confidence 7899999999999998999999999999999965888888899999999999998877543 23 244454432 3
Q ss_pred CCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeeccCCChHHHHHHHHCCCCCCCC
Q 017793 254 GSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKP 333 (366)
Q Consensus 254 ~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~ 333 (366)
++++|++|||+|+...++.++++++++|+++.+|........+.....++.+++.+.....+.+++++++++++.+.+.+
T Consensus 232 ~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~ 311 (343)
T cd05285 232 GKGPDVVIECTGAESCIQTAIYATRPGGTVVLVGMGKPEVTLPLSAASLREIDIRGVFRYANTYPTAIELLASGKVDVKP 311 (343)
T ss_pred CCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCHHHHhhCCcEEEEeccChHHHHHHHHHHHcCCCCchH
Confidence 56799999999976688999999999999999986544333344466778888888776667889999999999875445
Q ss_pred ceEEEecCChhhHHHHHHHHHcCC-CceEEEee
Q 017793 334 LITHRFGFTQKEIEDAFEISAQGG-NAIKVMFN 365 (366)
Q Consensus 334 ~~~~~~~l~~~~~~~a~~~~~~~~-~~gkvvi~ 365 (366)
.+.+.|++ +++.+|++.+.+++ ..+|++|.
T Consensus 312 ~~~~~~~l--~~~~~a~~~~~~~~~~~~k~~~~ 342 (343)
T cd05285 312 LITHRFPL--EDAVEAFETAAKGKKGVIKVVIE 342 (343)
T ss_pred hEEEEEeH--HHHHHHHHHHHcCCCCeeEEEEe
Confidence 56788888 99999999999885 46999974
No 39
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=100.00 E-value=6.5e-42 Score=319.07 Aligned_cols=334 Identities=28% Similarity=0.443 Sum_probs=274.1
Q ss_pred ccceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeC
Q 017793 13 NQNMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVG 91 (366)
Q Consensus 13 ~~~~~~~~~~~-~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG 91 (366)
++||++++.++ ..+++++.|.|.++++||+|||.++|+|++|+++..|. .+..+|.++|+|++|+|+++|
T Consensus 1 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~---------~~~~~p~v~G~e~~G~V~~vG 71 (365)
T cd08278 1 MKTTAAVVREPGGPFVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGG---------LPTPLPAVLGHEGAGVVEAVG 71 (365)
T ss_pred CccEEeeeccCCCcceEEEeecCCCCCCeEEEEEEEeecCcccHHHhcCC---------CCCCCCcccccceeEEEEEeC
Confidence 47899999975 67899999999999999999999999999999988732 223468899999999999999
Q ss_pred CCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCC----------------------CCCCCcceEEEEecCC
Q 017793 92 SEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGS----------------------PPTNGSLAHKVVHPAK 149 (366)
Q Consensus 92 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~g~~~e~~~~~~~ 149 (366)
+++++|++||+|++.+. .|++|.+|..+..++|++..-... ....|+|+||++++++
T Consensus 72 ~~v~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~ 150 (365)
T cd08278 72 SAVTGLKPGDHVVLSFA-SCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHER 150 (365)
T ss_pred CCcccCCCCCEEEEccc-CCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEecch
Confidence 99999999999999764 899999999999999987532110 1135899999999999
Q ss_pred ceEECCCCCCccccccch-hhHHHHHHH-HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc
Q 017793 150 LCYKLPDNVSLEEGAMCE-PLSVGVHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL 227 (366)
Q Consensus 150 ~~~~~P~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l 227 (366)
.++++|+++++++++.+. .+.+|+.++ +...++++++|||+|+|++|++++|+|+..|++.++++++++++.++++++
T Consensus 151 ~~~~iP~~~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~~~ 230 (365)
T cd08278 151 NVVKVDKDVPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKEL 230 (365)
T ss_pred hEEECCCCCCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHc
Confidence 999999999999888775 778888876 457899999999999999999999999999997799999999999999999
Q ss_pred CCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccC--CCceeechHhhhcCc
Q 017793 228 GADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK--TEMTVALTPAAAREV 305 (366)
Q Consensus 228 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~--~~~~~~~~~~~~~~~ 305 (366)
|++.++++.. .++.+.+.+.. +.++|+++||+|....+..++++++++|+++.+|... ....++...+..++.
T Consensus 231 g~~~~i~~~~--~~~~~~v~~~~---~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~ 305 (365)
T cd08278 231 GATHVINPKE--EDLVAAIREIT---GGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPGAEVTLDVNDLLVSGK 305 (365)
T ss_pred CCcEEecCCC--cCHHHHHHHHh---CCCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCCCCccccCHHHHhhcCc
Confidence 9988876532 45655555443 5689999999997778899999999999999998653 223344444556778
Q ss_pred EEEEeecc----CCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEee
Q 017793 306 DVIGIFRY----RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 365 (366)
Q Consensus 306 ~~~~~~~~----~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~ 365 (366)
++.++... .+.+++++++++++.+.+.+.+ ..|++ +++++|++.+.++.. -|++++
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~-~~~~l--~~~~~a~~~~~~~~~-~k~~~~ 365 (365)
T cd08278 306 TIRGVIEGDSVPQEFIPRLIELYRQGKFPFDKLV-TFYPF--EDINQAIADSESGKV-IKPVLR 365 (365)
T ss_pred eEEEeecCCcChHHHHHHHHHHHHcCCCChHHhe-EEecH--HHHHHHHHHHHCCCc-eEEEEC
Confidence 87776533 3457889999999988432333 57888 999999999998765 488774
No 40
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=100.00 E-value=8.2e-42 Score=318.38 Aligned_cols=333 Identities=28% Similarity=0.477 Sum_probs=275.3
Q ss_pred eEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCCC
Q 017793 16 MAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEV 94 (366)
Q Consensus 16 ~~~~~~~~-~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v 94 (366)
+++|+... ..+++++.|.|.+++++|+||+.++++|++|++...+ .....+|.++|||++|+|+++|+++
T Consensus 2 ~a~~~~~~~~~~~~~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g---------~~~~~~~~i~g~e~~G~V~~vG~~v 72 (365)
T cd05279 2 KAAVLWEKGKPLSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDG---------KLPTPLPVILGHEGAGIVESIGPGV 72 (365)
T ss_pred ceeEEecCCCCcEEEEeecCCCCCCeEEEEEEEeeecchhHHHhcC---------CCCCCCCcccccceeEEEEEeCCCc
Confidence 57778755 5899999999999999999999999999999988873 3334567899999999999999999
Q ss_pred CCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCC--------------------CCCcceEEEEecCCceEEC
Q 017793 95 KSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPP--------------------TNGSLAHKVVHPAKLCYKL 154 (366)
Q Consensus 95 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~g~~~e~~~~~~~~~~~~ 154 (366)
+++++||+|++.+..+|+.|.+|..+++++|+...+++... ..|+|+||++++++.++++
T Consensus 73 ~~~~~Gd~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~l 152 (365)
T cd05279 73 TTLKPGDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKI 152 (365)
T ss_pred ccCCCCCEEEEcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeeccCCccccccccccccceEEecCCceEEC
Confidence 99999999999988899999999999999998866542110 2479999999999999999
Q ss_pred CCCCCccccccch-hhHHHHHHH-HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCcee
Q 017793 155 PDNVSLEEGAMCE-PLSVGVHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADET 232 (366)
Q Consensus 155 P~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~ 232 (366)
|+++++++++.+. .+.+||+++ +.++++++++|||+|+|++|++++|+|+..|+..++++++++++.++++++|++.+
T Consensus 153 P~~~~~~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~ 232 (365)
T cd05279 153 DPDAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATEC 232 (365)
T ss_pred CCCCCHHHhhHhccchhHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCee
Confidence 9999999998776 788899886 55889999999999999999999999999999778888889999999999999887
Q ss_pred eecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhc-CCceEEEEcccC--CCceeechHhhhcCcEEEE
Q 017793 233 AKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATR-PGGKVCLIGLAK--TEMTVALTPAAAREVDVIG 309 (366)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~-~~G~~v~~g~~~--~~~~~~~~~~~~~~~~~~~ 309 (366)
++......++.+.+.++. ++++|++||++|....+..++++++ ++|+++.+|... ....+....+ .+..++.+
T Consensus 233 v~~~~~~~~~~~~l~~~~---~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~l~g 308 (365)
T cd05279 233 INPRDQDKPIVEVLTEMT---DGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSGTEATLDPNDL-LTGRTIKG 308 (365)
T ss_pred cccccccchHHHHHHHHh---CCCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCCCCCceeeCHHHH-hcCCeEEE
Confidence 765332114555555443 4689999999987678899999999 999999998653 2333444444 56677777
Q ss_pred eec----cCCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEe
Q 017793 310 IFR----YRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF 364 (366)
Q Consensus 310 ~~~----~~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi 364 (366)
.+. ..+.+++++++++++.+.+.+..+++|++ +++++|++.+++++. .|+++
T Consensus 309 ~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l--~~~~~a~~~~~~~~~-~~~~~ 364 (365)
T cd05279 309 TVFGGWKSKDSVPKLVALYRQKKFPLDELITHVLPF--EEINDGFDLMRSGES-IRTIL 364 (365)
T ss_pred EeccCCchHhHHHHHHHHHHcCCcchhHheeeeecH--HHHHHHHHHHhCCCc-eeeee
Confidence 643 25678899999999999766678888999 999999999988755 46665
No 41
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=100.00 E-value=1.3e-41 Score=319.03 Aligned_cols=338 Identities=32% Similarity=0.499 Sum_probs=276.8
Q ss_pred ceEEEEeeCCceEEEEecCCCC-CCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCC
Q 017793 15 NMAAWLLGIKTLKIQPYHLPTL-GPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE 93 (366)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~p~~-~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~ 93 (366)
|+++++.+++.++++++|.|+| ++++|+||+.++++|++|+..+.|.+. ..++|.++|+|++|+|+++|++
T Consensus 1 m~a~~~~~~~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~--------~~~~p~~~G~e~~G~V~~vG~~ 72 (386)
T cd08283 1 MKALVWHGKGDVRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIP--------GMKKGDILGHEFMGVVEEVGPE 72 (386)
T ss_pred CeeEEEecCCCceEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCC--------CCCCCccccccceEEEEEeCCC
Confidence 6788888888999999999998 599999999999999999998874321 1245889999999999999999
Q ss_pred CCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccC---------------C----CCCCCcceEEEEecCC--ceE
Q 017793 94 VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFG---------------S----PPTNGSLAHKVVHPAK--LCY 152 (366)
Q Consensus 94 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~----~~~~g~~~e~~~~~~~--~~~ 152 (366)
++++++||+|++.+...||+|.+|..+.+.+|+++.... . ....|+|+||++++.+ .++
T Consensus 73 v~~~~~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~ 152 (386)
T cd08283 73 VRNLKVGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADVGPF 152 (386)
T ss_pred CCCCCCCCEEEEcCcCCCCCChhhcCCCcccCCCcccccccccccccccccccccccccCCCCCeeEEEEEcccccCeEE
Confidence 999999999999988899999999999999998754221 0 0136999999999988 899
Q ss_pred ECCCCCCccccccch-hhHHHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCce
Q 017793 153 KLPDNVSLEEGAMCE-PLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE 231 (366)
Q Consensus 153 ~~P~~~~~~~aa~~~-~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~ 231 (366)
++|+++++++|+.+. .+.+||++++..+++++++|||+|+|++|++++++|+..|+.+++++++++++.+++++++...
T Consensus 153 ~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~g~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~~~~~~ 232 (386)
T cd08283 153 KIPDDLSDEKALFLSDILPTGYHAAELAEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLGAE 232 (386)
T ss_pred ECCCCCCHHHHhhhccchhhhHHHHhhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcE
Confidence 999999999998775 7889999997788999999999999999999999999999866999999999999999985445
Q ss_pred eeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCCh---------------------HHHHHHHHhhcCCceEEEEcccC
Q 017793 232 TAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFD---------------------KTMSTALNATRPGGKVCLIGLAK 290 (366)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~---------------------~~~~~~~~~l~~~G~~v~~g~~~ 290 (366)
++++... .++...+..+. .++++|++||++|+. ..++.++++++++|+++.+|...
T Consensus 233 vi~~~~~-~~~~~~l~~~~--~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~g~~~ 309 (386)
T cd08283 233 TINFEEV-DDVVEALRELT--GGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGTVSIIGVYG 309 (386)
T ss_pred EEcCCcc-hHHHHHHHHHc--CCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccCCEEEEEcCCC
Confidence 5554321 13555555443 245799999999753 36788999999999999998654
Q ss_pred CC-ceeechHhhhcCcEEEEeecc-CCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCC-CceEEEee
Q 017793 291 TE-MTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGG-NAIKVMFN 365 (366)
Q Consensus 291 ~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~-~~gkvvi~ 365 (366)
.. ........+.++.++.+.... .+.+++++++++++++.+.+.+++.|++ +++++|++.+.++. ..+|+||+
T Consensus 310 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~l--~~~~~a~~~~~~~~~~~~k~~~~ 385 (386)
T cd08283 310 GTVNKFPIGAAMNKGLTLRMGQTHVQRYLPRLLELIESGELDPSFIITHRLPL--EDAPEAYKIFDKKEDGCIKVVLK 385 (386)
T ss_pred CCcCccCHHHHHhCCcEEEeccCCchHHHHHHHHHHHcCCCChhHceEEEecH--HHHHHHHHHHHhCCCCeEEEEec
Confidence 32 223333456777787776544 5578899999999999665567788888 99999999998886 56899986
No 42
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=100.00 E-value=2.3e-41 Score=313.43 Aligned_cols=334 Identities=31% Similarity=0.533 Sum_probs=275.5
Q ss_pred ceEEEEeeCCceEEEEecCCCCC-CCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCC
Q 017793 15 NMAAWLLGIKTLKIQPYHLPTLG-PQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE 93 (366)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~p~~~-~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~ 93 (366)
|+++++..+..++++++|+|+|. ++||+||+.++++|+.|+....| .....+|.++|+|++|+|+++|++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g---------~~~~~~~~~~g~e~~G~V~~vG~~ 71 (344)
T cd08284 1 MKAVVFKGPGDVRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRG---------HIPSTPGFVLGHEFVGEVVEVGPE 71 (344)
T ss_pred CeeEEEecCCCceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcC---------CCCCCCCcccccceEEEEEeeCCC
Confidence 57788887788999999999985 99999999999999999988773 222345788999999999999999
Q ss_pred CCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccC---CCCCCCcceEEEEecCC--ceEECCCCCCccccccch-
Q 017793 94 VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFG---SPPTNGSLAHKVVHPAK--LCYKLPDNVSLEEGAMCE- 167 (366)
Q Consensus 94 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~g~~~e~~~~~~~--~~~~~P~~~~~~~aa~~~- 167 (366)
++++++||+|++.+..+|+.|.+|..++...|++...++ ....+|+|++|+.++.+ .++++|+++++++++.+.
T Consensus 72 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~p~~l~~~~a~~l~~ 151 (344)
T cd08284 72 VRTLKVGDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSPNLDGAQAEYVRVPFADGTLLKLPDGLSDEAALLLGD 151 (344)
T ss_pred ccccCCCCEEEEcccCCCCCChHHhCcCcccCCCCccccccccCCCCCceeEEEEcccccCceEECCCCCCHHHhhhhcC
Confidence 999999999999988999999999999999998865552 22346999999999965 999999999999888765
Q ss_pred hhHHHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHH
Q 017793 168 PLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVG 247 (366)
Q Consensus 168 ~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~ 247 (366)
.+.+||+++...+++++++|||+|+|++|++++|+|+..|+..++++++++++.++++++|+.. ++. ...++...+.
T Consensus 152 ~~~ta~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~~-~~~--~~~~~~~~l~ 228 (344)
T cd08284 152 ILPTGYFGAKRAQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAEP-INF--EDAEPVERVR 228 (344)
T ss_pred chHHHHhhhHhcCCccCCEEEEECCcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCCeE-Eec--CCcCHHHHHH
Confidence 8899999997788899999999999999999999999999756888888889999999999753 333 3345666665
Q ss_pred HHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCC-CceeechHhhhcCcEEEEeec-cCCChHHHHHHHH
Q 017793 248 KIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT-EMTVALTPAAAREVDVIGIFR-YRSTWPLCIEFLR 325 (366)
Q Consensus 248 ~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~ 325 (366)
++. .+.++|++||++++.......+++++++|+++.+|.... .........+.++.++.+... ..+.++++++++.
T Consensus 229 ~~~--~~~~~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (344)
T cd08284 229 EAT--EGRGADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHTAEEFPFPGLDAYNKNLTLRFGRCPVRSLFPELLPLLE 306 (344)
T ss_pred HHh--CCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEECcCCCCCccccHHHHhhcCcEEEEecCCcchhHHHHHHHHH
Confidence 543 356899999999987788999999999999999986652 222333345566777665432 2668999999999
Q ss_pred CCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEee
Q 017793 326 SGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 365 (366)
Q Consensus 326 ~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~ 365 (366)
++.+.+.+.+.+.+++ ++++++++.+.++.. +|+|++
T Consensus 307 ~~~i~~~~~~~~~~~~--~~~~~a~~~~~~~~~-~k~Vi~ 343 (344)
T cd08284 307 SGRLDLEFLIDHRMPL--EEAPEAYRLFDKRKV-LKVVLD 343 (344)
T ss_pred cCCCChHHhEeeeecH--HHHHHHHHHHhcCCc-eEEEec
Confidence 9998655556778888 999999999998877 999985
No 43
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=100.00 E-value=1.7e-41 Score=319.54 Aligned_cols=347 Identities=21% Similarity=0.237 Sum_probs=279.7
Q ss_pred CcccceEEEEeeC------CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhccccccc-ccCcc-CCCCcccccc
Q 017793 11 DKNQNMAAWLLGI------KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMR-CANFI-VKKPMVIGHE 82 (366)
Q Consensus 11 ~~~~~~~~~~~~~------~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~-~~~~~-~~~p~i~G~e 82 (366)
.|.+|++.++..+ ..++++++|.|.++++||+||+.++++|++|++...|.+..... ..... ...+.++|||
T Consensus 9 ~~~~~~a~~~~~~~~g~~~~~~~~~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~e 88 (393)
T cd08246 9 VPEKMYAFAIRPERYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSD 88 (393)
T ss_pred CchhhhheeeecccCCCcccceEEeecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCccccccc
Confidence 5778899888522 25788999999999999999999999999999887643211000 00001 1223589999
Q ss_pred eeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccc
Q 017793 83 CAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEE 162 (366)
Q Consensus 83 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~ 162 (366)
++|+|+++|++++.|++||+|++.+...|+.|..|..+..++|+...+++.....|+|+||++++...++++|+++++++
T Consensus 89 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~~g~~a~y~~v~~~~l~~iP~~l~~~~ 168 (393)
T cd08246 89 ASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIWGYETNYGSFAQFALVQATQLMPKPKHLSWEE 168 (393)
T ss_pred eEEEEEEeCCCCCcCCCCCEEEEeccccccCcccccccccccccccccccccCCCCcceeEEEechHHeEECCCCCCHHH
Confidence 99999999999999999999999999999999999999999999888887766689999999999999999999999999
Q ss_pred cccch-hhHHHHHHHHh---CCCCCCCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCC
Q 017793 163 GAMCE-PLSVGVHACRR---ANVGPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVST 237 (366)
Q Consensus 163 aa~~~-~~~~a~~~l~~---~~~~~~~~vlI~G~-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~ 237 (366)
++.+. .+.+||+++.. ++++++++|||+|+ |++|++++++|+.+|+ .++++++++++.++++++|++.++++..
T Consensus 169 aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~-~vv~~~~s~~~~~~~~~~G~~~~i~~~~ 247 (393)
T cd08246 169 AAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGA-NPVAVVSSEEKAEYCRALGAEGVINRRD 247 (393)
T ss_pred HhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHcCCCEEEcccc
Confidence 88665 78899998743 67899999999995 9999999999999999 5667778899999999999998877533
Q ss_pred CC--------------------cchHHHHHHHHHhhCC-CCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCC-Ccee
Q 017793 238 DI--------------------EDVDTDVGKIQNAMGS-GIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT-EMTV 295 (366)
Q Consensus 238 ~~--------------------~~~~~~~~~~~~~~~~-~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~ 295 (366)
.. ..+.+.+.++. .+. ++|++||++|+ ..+..++++++++|+++.+|.... ...+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~--~~~~g~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~ 324 (393)
T cd08246 248 FDHWGVLPDVNSEAYTAWTKEARRFGKAIWDIL--GGREDPDIVFEHPGR-ATFPTSVFVCDRGGMVVICAGTTGYNHTY 324 (393)
T ss_pred cccccccccccchhhhhhhhccchHHHHHHHHh--CCCCCCeEEEECCch-HhHHHHHHHhccCCEEEEEcccCCCCCCC
Confidence 21 12334444433 244 79999999996 578889999999999999986433 2234
Q ss_pred echHhhhcCcEEEEeecc-CCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcC-CCceEEEee
Q 017793 296 ALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQG-GNAIKVMFN 365 (366)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~-~~~gkvvi~ 365 (366)
....+..++.++.+.+.. .+.+++++++++++.+ .+.++++|++ ++++++++.+.++ ...||+++-
T Consensus 325 ~~~~l~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l--~~~~~~~~~l--~~~~~a~~~~~~~~~~~gkvvv~ 392 (393)
T cd08246 325 DNRYLWMRQKRIQGSHFANDREAAEANRLVMKGRI--DPCLSKVFSL--DETPDAHQLMHRNQHHVGNMAVL 392 (393)
T ss_pred cHHHHhhheeEEEecccCcHHHHHHHHHHHHcCCc--eeeeeEEEeH--HHHHHHHHHHHhCccccceEEEe
Confidence 445566777788877655 3578899999999988 4557788999 9999999999999 788999874
No 44
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=100.00 E-value=3.3e-41 Score=311.76 Aligned_cols=334 Identities=37% Similarity=0.682 Sum_probs=273.8
Q ss_pred EEeeCCceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCCCCCCC
Q 017793 19 WLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLE 98 (366)
Q Consensus 19 ~~~~~~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~ 98 (366)
|+++++.+.+++.|+|.++++||+||+.++++|++|+....... .+.....+|.++|+|++|+|+++|+++++|+
T Consensus 2 ~~~~~~~~~~~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~-----~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~ 76 (339)
T cd08232 2 VIHAAGDLRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGG-----FGTVRLREPMVLGHEVSGVVEAVGPGVTGLA 76 (339)
T ss_pred eeccCCceEEEEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCC-----CCcccccCCeecCccceEEEEeeCCCCCcCC
Confidence 67788999999999999999999999999999999997653110 0111124577899999999999999999999
Q ss_pred CCCEEEEcCCcCCCCCccccCCCCCCCCCccccCC----CCCCCcceEEEEecCCceEECCCCCCccccccchhhHHHHH
Q 017793 99 VGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGS----PPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVH 174 (366)
Q Consensus 99 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~~~~~a~~ 174 (366)
+||+|++.+..+|++|.+|..|..+.|+.+.+++. ....|+|+||+.++.+.++++|+++++++|+...++.+||+
T Consensus 77 ~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~~~~~~aa~~~~~~~a~~ 156 (339)
T cd08232 77 PGQRVAVNPSRPCGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQGGFREYLVVDASQCVPLPDGLSLRRAALAEPLAVALH 156 (339)
T ss_pred CCCEEEEccCCcCCCChHHhCcCcccCccccceeeccccCCCCCceeeEEEechHHeEECcCCCCHHHhhhcchHHHHHH
Confidence 99999999999999999999999999998765542 12579999999999999999999999999887668888999
Q ss_pred HHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhC
Q 017793 175 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMG 254 (366)
Q Consensus 175 ~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (366)
++.+....++++|||.|+|.+|++++|+|+.+|+.+++++++++++.++++++|++.++++.. .+ +.++.. ..
T Consensus 157 ~l~~~~~~~~~~VLI~g~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~--~~----~~~~~~-~~ 229 (339)
T cd08232 157 AVNRAGDLAGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLAR--DP----LAAYAA-DK 229 (339)
T ss_pred HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCCEEEcCCc--hh----hhhhhc-cC
Confidence 886644448999999989999999999999999866888888888889999999988877543 22 222221 24
Q ss_pred CCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeeccCCChHHHHHHHHCCCCCCCCc
Q 017793 255 SGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPL 334 (366)
Q Consensus 255 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~ 334 (366)
.++|+++|+.|+...++.++++|+++|+++.+|............+..+++++.+.......+++++++++++.+.+.+.
T Consensus 230 ~~vd~vld~~g~~~~~~~~~~~L~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 309 (339)
T cd08232 230 GDFDVVFEASGAPAALASALRVVRPGGTVVQVGMLGGPVPLPLNALVAKELDLRGSFRFDDEFAEAVRLLAAGRIDVRPL 309 (339)
T ss_pred CCccEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCccCcHHHHhhcceEEEEEecCHHHHHHHHHHHHcCCCCchhh
Confidence 56999999999766788999999999999998754422222333345677788777666667899999999999876666
Q ss_pred eEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793 335 ITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 366 (366)
Q Consensus 335 ~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~ 366 (366)
+.+.|++ ++++++++.+.++...||+|+++
T Consensus 310 ~~~~~~~--~~~~~a~~~~~~~~~~gkvvv~~ 339 (339)
T cd08232 310 ITAVFPL--EEAAEAFALAADRTRSVKVQLSF 339 (339)
T ss_pred eeEEecH--HHHHHHHHHHHhCCCceeEEEeC
Confidence 7788888 99999999999888899999874
No 45
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=100.00 E-value=2.6e-41 Score=313.46 Aligned_cols=337 Identities=31% Similarity=0.524 Sum_probs=276.1
Q ss_pred ceEEEEeeCCceEEEEecCCCC-CCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCC
Q 017793 15 NMAAWLLGIKTLKIQPYHLPTL-GPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE 93 (366)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~p~~-~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~ 93 (366)
||++++.+++.+++.+.|.|.| .+++|+||+.++++|++|+.+..|.+. ..++|.++|+|++|+|+++|++
T Consensus 1 ~ka~~~~~~~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~--------~~~~~~~~g~e~~G~V~~vG~~ 72 (347)
T cd05278 1 MKALVYLGPGKIGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVP--------GAKHGMILGHEFVGEVVEVGSD 72 (347)
T ss_pred CceEEEecCCceEEEEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCC--------CCCCCceeccceEEEEEEECCC
Confidence 5788888888899999999999 999999999999999999988773221 1455789999999999999999
Q ss_pred CCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccC--CCCCCCcceEEEEecCC--ceEECCCCCCccccccch-h
Q 017793 94 VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFG--SPPTNGSLAHKVVHPAK--LCYKLPDNVSLEEGAMCE-P 168 (366)
Q Consensus 94 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~~e~~~~~~~--~~~~~P~~~~~~~aa~~~-~ 168 (366)
+++|++||+|++.+..+||.|.+|..|..++|++..... .....|+|+||++++++ .++++|+++++++|+.++ .
T Consensus 73 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~~~~~~aa~l~~~ 152 (347)
T cd05278 73 VKRLKPGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRIDGGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDI 152 (347)
T ss_pred ccccCCCCEEEecCCCCCCCChhHhCcCcccCcCCCcccccccCCCCeeeEEEEecchhCeEEECCCCCCHHHHhhhcch
Confidence 999999999999999999999999999999999865332 12347999999999987 999999999999998875 7
Q ss_pred hHHHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHH
Q 017793 169 LSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGK 248 (366)
Q Consensus 169 ~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~ 248 (366)
+.+||+++...+++++++|||.|+|++|++++|+|+..|...++++++++++.++++++|++.++++.. .++...+..
T Consensus 153 ~~ta~~~~~~~~~~~~~~VlI~g~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~--~~~~~~i~~ 230 (347)
T cd05278 153 LPTGFHGAELAGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINPKN--GDIVEQILE 230 (347)
T ss_pred hhheeehhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCCcEEEcCCc--chHHHHHHH
Confidence 889999887788999999999888999999999999999757888888889999999999988877543 345555554
Q ss_pred HHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeech-HhhhcCcEEEEeecc-CCChHHHHHHHHC
Q 017793 249 IQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALT-PAAAREVDVIGIFRY-RSTWPLCIEFLRS 326 (366)
Q Consensus 249 ~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~l~~ 326 (366)
+. .++++|++||++++...+..++++|+++|+++.+|........... ..+.++.++.+.... .+.++++++++++
T Consensus 231 ~~--~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (347)
T cd05278 231 LT--GGRGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLVPVRARMPELLDLIEE 308 (347)
T ss_pred Hc--CCCCCcEEEEccCCHHHHHHHHHHhhcCCEEEEEcCCCCCcccCccchhhhceeEEEeeccCchhHHHHHHHHHHc
Confidence 43 3468999999999866889999999999999999854432211111 223455666654333 4678899999999
Q ss_pred CCCCCCCceEEEecCChhhHHHHHHHHHcCCC-ceEEEee
Q 017793 327 GKIDVKPLITHRFGFTQKEIEDAFEISAQGGN-AIKVMFN 365 (366)
Q Consensus 327 g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~-~gkvvi~ 365 (366)
+.+.+.+.....|++ ++++++++.+..+.. .+|++++
T Consensus 309 ~~l~~~~~~~~~~~~--~~~~~a~~~~~~~~~~~~~~vv~ 346 (347)
T cd05278 309 GKIDPSKLITHRFPL--DDILKAYRLFDNKPDGCIKVVIR 346 (347)
T ss_pred CCCChhHcEEEEecH--HHHHHHHHHHhcCCCCceEEEec
Confidence 999654445678888 999999999988876 7899886
No 46
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=4e-41 Score=311.42 Aligned_cols=334 Identities=29% Similarity=0.479 Sum_probs=265.9
Q ss_pred ceEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccc-ccccc--CccCCCCcccccceeEEEEEeC
Q 017793 15 NMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLS-TMRCA--NFIVKKPMVIGHECAGIIEEVG 91 (366)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~-~~~~~--~~~~~~p~i~G~e~~G~V~~vG 91 (366)
||++++..+ .++++++|.|+++++||+||+.++++|+.|++...|.... ....+ .....+|.++|+|++|+|+++|
T Consensus 1 m~a~~~~~~-~~~~~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG 79 (341)
T cd08262 1 MRAAVFRDG-PLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVVDYG 79 (341)
T ss_pred CceEEEeCC-ceEEEecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEEEeC
Confidence 577787766 8999999999999999999999999999999988752110 00000 1123457889999999999999
Q ss_pred CCCCC-CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccchhhH
Q 017793 92 SEVKS-LEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLS 170 (366)
Q Consensus 92 ~~v~~-~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~~~~ 170 (366)
++++. |++||+|++.+..+|+.|..|..+.. ....|+|+||++++.+.++++|+++++++++...++.
T Consensus 80 ~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~-----------~~~~g~~~~~~~v~~~~~~~lP~~~s~~~a~~~~~~~ 148 (341)
T cd08262 80 PGTERKLKVGTRVTSLPLLLCGQGASCGIGLS-----------PEAPGGYAEYMLLSEALLLRVPDGLSMEDAALTEPLA 148 (341)
T ss_pred CCCcCCCCCCCEEEecCCcCCCCChhhhCCCC-----------cCCCCceeeeEEechHHeEECCCCCCHHHhhhhhhHH
Confidence 99997 99999999999999999999843211 1247999999999999999999999999888556788
Q ss_pred HHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCc--chHHHHHH
Q 017793 171 VGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIE--DVDTDVGK 248 (366)
Q Consensus 171 ~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~--~~~~~~~~ 248 (366)
+||+++..++++++++|||+|+|++|++++|+|+.+|++.++++++++++.++++++|++.+++++.... .+. .+..
T Consensus 149 ~a~~~~~~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~-~~~~ 227 (341)
T cd08262 149 VGLHAVRRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALAMGADIVVDPAADSPFAAWA-AELA 227 (341)
T ss_pred HHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEEcCCCcCHHHHHH-HHHH
Confidence 8998887788999999999999999999999999999977888888999999999999988777543211 111 1222
Q ss_pred HHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeecc-CCChHHHHHHHHCC
Q 017793 249 IQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSG 327 (366)
Q Consensus 249 ~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g 327 (366)
. ..+.++|++||++|+...+..++++++++|+++.+|...............++.++.+.... .+.+++++++++++
T Consensus 228 ~--~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 305 (341)
T cd08262 228 R--AGGPKPAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCMESDNIEPALAIRKELTLQFSLGYTPEEFADALDALAEG 305 (341)
T ss_pred H--hCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCCccCHHHHhhcceEEEEEecccHHHHHHHHHHHHcC
Confidence 2 23567999999999755788899999999999999865432222222224566777665544 45788999999999
Q ss_pred CCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEee
Q 017793 328 KIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 365 (366)
Q Consensus 328 ~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~ 365 (366)
.+.+.+.+.+.+++ ++++++++.+.++...||+|++
T Consensus 306 ~i~~~~~i~~~~~l--~~~~~a~~~~~~~~~~~kvvv~ 341 (341)
T cd08262 306 KVDVAPMVTGTVGL--DGVPDAFEALRDPEHHCKILVD 341 (341)
T ss_pred CCChHHheEEEeeH--HHHHHHHHHHhcCCCceEEEeC
Confidence 99765666788999 9999999999999999999975
No 47
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=100.00 E-value=4.5e-41 Score=311.03 Aligned_cols=337 Identities=32% Similarity=0.589 Sum_probs=275.2
Q ss_pred ceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCC
Q 017793 15 NMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE 93 (366)
Q Consensus 15 ~~~~~~~~~-~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~ 93 (366)
||+.++.++ +.+++.+.|.|.|+++||+||+.++++|++|+.++.+.... .....+|.++|+|++|+|+++|++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~-----~~~~~~p~~~g~e~~G~V~~vG~~ 75 (341)
T PRK05396 1 MKALVKLKAEPGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWA-----QKTIPVPMVVGHEFVGEVVEVGSE 75 (341)
T ss_pred CceEEEecCCCceEEEECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcc-----cccCCCCcccceeeEEEEEEeCCC
Confidence 467777766 57999999999999999999999999999999876632110 011246778999999999999999
Q ss_pred CCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccchhhHHHH
Q 017793 94 VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGV 173 (366)
Q Consensus 94 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~~~~~a~ 173 (366)
++.+++||+|++.+..+|+.|.+|..+++++|+...+.+ ...+|+|++|+.++.+.++++|+++++++++.+.++.+++
T Consensus 76 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~v~~~~~~~iP~~l~~~~~~~~~~~~~~~ 154 (341)
T PRK05396 76 VTGFKVGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVG-VNRPGAFAEYLVIPAFNVWKIPDDIPDDLAAIFDPFGNAV 154 (341)
T ss_pred CCcCCCCCEEEECCCCCCCCChhhhCcChhhCCCcceee-ecCCCcceeeEEechHHeEECcCCCCHHHhHhhhHHHHHH
Confidence 999999999999999999999999999999999764443 2357999999999999999999999998888666667776
Q ss_pred HHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhh
Q 017793 174 HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM 253 (366)
Q Consensus 174 ~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (366)
+++.. ...+|++|+|+|+|++|++++|+|+..|+++++++++++++.++++++|++.++++.. .++.+.+.++. .
T Consensus 155 ~~~~~-~~~~g~~vlV~~~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~~~--~~~~~~~~~~~--~ 229 (341)
T PRK05396 155 HTALS-FDLVGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNVAK--EDLRDVMAELG--M 229 (341)
T ss_pred HHHHc-CCCCCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecCcc--ccHHHHHHHhc--C
Confidence 65533 3468999999989999999999999999966888888899999999999998877543 45666665543 2
Q ss_pred CCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeecc--CCChHHHHHHHHCCCCCC
Q 017793 254 GSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY--RSTWPLCIEFLRSGKIDV 331 (366)
Q Consensus 254 ~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~g~~~~ 331 (366)
+.++|++|||.|+...++.++++|+++|+++.+|.......+....+..++.++.++... .+.+.+++++++++ +.+
T Consensus 230 ~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~ 308 (341)
T PRK05396 230 TEGFDVGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPGDMAIDWNKVIFKGLTIKGIYGREMFETWYKMSALLQSG-LDL 308 (341)
T ss_pred CCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCCcccHHHHhhcceEEEEEEccCccchHHHHHHHHHcC-CCh
Confidence 568999999999877889999999999999999876544444455677778888776532 34566788999998 434
Q ss_pred CCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793 332 KPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 366 (366)
Q Consensus 332 ~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~ 366 (366)
.+.+.+.+++ +++++|++.+.++. .||+++++
T Consensus 309 ~~~~~~~~~l--~~~~~a~~~~~~~~-~gk~vv~~ 340 (341)
T PRK05396 309 SPIITHRFPI--DDFQKGFEAMRSGQ-SGKVILDW 340 (341)
T ss_pred hHheEEEEeH--HHHHHHHHHHhcCC-CceEEEec
Confidence 5667788888 99999999999886 79999875
No 48
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=100.00 E-value=4.6e-41 Score=308.15 Aligned_cols=318 Identities=30% Similarity=0.500 Sum_probs=268.7
Q ss_pred ceEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCCC
Q 017793 15 NMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEV 94 (366)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v 94 (366)
|+++++.++.+++++++|.|+++++||+||+.++++|++|+....| .. ..|.++|+|++|+|+++|++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g---------~~--~~~~~~G~e~~G~Vv~~G~~- 68 (319)
T cd08242 1 MKALVLDGGLDLRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKG---------YY--PFPGVPGHEFVGIVEEGPEA- 68 (319)
T ss_pred CeeEEEeCCCcEEEEECCCCCCCCCeEEEEEEEEEEccccHHHHcC---------CC--CCCCccCceEEEEEEEeCCC-
Confidence 5788888888899999999999999999999999999999988873 22 25788999999999999998
Q ss_pred CCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccchhhHHHHH
Q 017793 95 KSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVH 174 (366)
Q Consensus 95 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~~~~~a~~ 174 (366)
+++||+|...+..+|+.|.+|..+.+.+|+.....+....+|+|++|++++.+.++++|++++.++++.+.++.+++.
T Consensus 69 --~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~~~~~~~~~ 146 (319)
T cd08242 69 --ELVGKRVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVDRDGAFAEYLTLPLENLHVVPDLVPDEQAVFAEPLAAALE 146 (319)
T ss_pred --CCCCCeEEECCCcCCCCChhhhCcCcccCCCCcccCccCCCCceEEEEEechHHeEECcCCCCHHHhhhhhHHHHHHH
Confidence 679999999988899999999999988888766554323579999999999999999999999988886555667777
Q ss_pred HHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhC
Q 017793 175 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMG 254 (366)
Q Consensus 175 ~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (366)
+++..+++++++|||+|+|.+|++++|+|+.+|++ +++++.++++.++++++|++.++++... ..+
T Consensus 147 ~~~~~~~~~g~~vlV~g~g~vg~~~~q~a~~~G~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~~-------------~~~ 212 (319)
T cd08242 147 ILEQVPITPGDKVAVLGDGKLGLLIAQVLALTGPD-VVLVGRHSEKLALARRLGVETVLPDEAE-------------SEG 212 (319)
T ss_pred HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCe-EEEEcCCHHHHHHHHHcCCcEEeCcccc-------------ccC
Confidence 77778899999999999999999999999999994 8888888999999999999877664221 135
Q ss_pred CCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeeccCCChHHHHHHHHCCCCCCCCc
Q 017793 255 SGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPL 334 (366)
Q Consensus 255 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~ 334 (366)
.++|+++||+|+...+..++++++++|+++..+.......+....+..++.++.+.+.. .+++++++++++.+++.+.
T Consensus 213 ~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~l~~~~~ 290 (319)
T cd08242 213 GGFDVVVEATGSPSGLELALRLVRPRGTVVLKSTYAGPASFDLTKAVVNEITLVGSRCG--PFAPALRLLRKGLVDVDPL 290 (319)
T ss_pred CCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCCCCccCHHHheecceEEEEEecc--cHHHHHHHHHcCCCChhhc
Confidence 68999999999877889999999999999987654444444455566777788776533 3899999999999976666
Q ss_pred eEEEecCChhhHHHHHHHHHcCCCceEEEee
Q 017793 335 ITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 365 (366)
Q Consensus 335 ~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~ 365 (366)
+.+.|++ +++++|++.+.++. .+|+||+
T Consensus 291 ~~~~~~l--~~~~~a~~~~~~~~-~~k~vi~ 318 (319)
T cd08242 291 ITAVYPL--EEALEAFERAAEPG-ALKVLLR 318 (319)
T ss_pred eEEEEeH--HHHHHHHHHHhcCC-ceEEEeC
Confidence 8899999 99999999998775 5899986
No 49
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=100.00 E-value=4.7e-41 Score=310.84 Aligned_cols=333 Identities=29% Similarity=0.480 Sum_probs=278.7
Q ss_pred ceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCC
Q 017793 15 NMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE 93 (366)
Q Consensus 15 ~~~~~~~~~-~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~ 93 (366)
||++++.++ +++.+.+.|.|++.+++++||+.++++|++|+....|.+.. .....+|.++|+|++|+|+++|++
T Consensus 1 ~ka~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-----~~~~~~~~~~G~e~~G~V~~vG~~ 75 (340)
T cd05284 1 MKAARLYEYGKPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGG-----ILPYKLPFTLGHENAGWVEEVGSG 75 (340)
T ss_pred CeeeEeccCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcc-----cccCCCCeecccceeEEEEEeCCC
Confidence 578888877 67899999999999999999999999999999887743211 123456889999999999999999
Q ss_pred CCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhHHH
Q 017793 94 VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVG 172 (366)
Q Consensus 94 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~~a 172 (366)
+..|++||+|++.+...|+.|..|..|..++|++..+.+. ...|+|++|+.++.+.++++|+++++++++.+. .+.+|
T Consensus 76 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~~P~~ls~~~aa~l~~~~~ta 154 (340)
T cd05284 76 VDGLKEGDPVVVHPPWGCGTCRYCRRGEENYCENARFPGI-GTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTA 154 (340)
T ss_pred CCcCcCCCEEEEcCCCCCCCChHHhCcCcccCCCCcccCc-cCCCcceeeEEecHHHeEECCCCCCHHHhhhhcchHHHH
Confidence 9999999999999888999999999999999999888776 568999999999999999999999999998775 78899
Q ss_pred HHHHHh--CCCCCCCEEEEECCCHHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHH
Q 017793 173 VHACRR--ANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKI 249 (366)
Q Consensus 173 ~~~l~~--~~~~~~~~vlI~G~g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~ 249 (366)
|+++.. ..++++++|||+|+|.+|++++|+|+..| . .++++++++++.+.++++|++.+++++. . +...+.++
T Consensus 155 ~~~l~~~~~~~~~~~~vlI~g~~~vg~~~~~~a~~~g~~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~-~~~~i~~~ 230 (340)
T cd05284 155 YHAVKKALPYLDPGSTVVVIGVGGLGHIAVQILRALTPA-TVIAVDRSEEALKLAERLGADHVLNASD--D-VVEEVREL 230 (340)
T ss_pred HHHHHHhcccCCCCCEEEEEcCcHHHHHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHhCCcEEEcCCc--c-HHHHHHHH
Confidence 999854 46889999999998889999999999999 6 6777888899999999999988777543 2 55555554
Q ss_pred HHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeecc-CCChHHHHHHHHCCC
Q 017793 250 QNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGK 328 (366)
Q Consensus 250 ~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~ 328 (366)
. .+.++|+++|++|+......++++|+++|+++.+|.... ..+.......+++++.+.... ...+++++++++++.
T Consensus 231 ~--~~~~~dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~ 307 (340)
T cd05284 231 T--GGRGADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGH-GRLPTSDLVPTEISVIGSLWGTRAELVEVVALAESGK 307 (340)
T ss_pred h--CCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCC-CccCHHHhhhcceEEEEEecccHHHHHHHHHHHHhCC
Confidence 3 246799999999986788999999999999999986543 222333334677788776543 567889999999999
Q ss_pred CCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEee
Q 017793 329 IDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 365 (366)
Q Consensus 329 ~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~ 365 (366)
+. + ..+.|++ +++++|++.+++++..||+++.
T Consensus 308 l~--~-~~~~~~~--~~~~~a~~~~~~~~~~gkvv~~ 339 (340)
T cd05284 308 VK--V-EITKFPL--EDANEALDRLREGRVTGRAVLV 339 (340)
T ss_pred CC--c-ceEEEeH--HHHHHHHHHHHcCCccceEEec
Confidence 84 3 3467888 9999999999999999999985
No 50
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=5.8e-41 Score=310.81 Aligned_cols=334 Identities=29% Similarity=0.492 Sum_probs=275.3
Q ss_pred ceEEEEeeCCceEEEEecCCCC-CCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCC
Q 017793 15 NMAAWLLGIKTLKIQPYHLPTL-GPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE 93 (366)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~p~~-~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~ 93 (366)
||++++++++.+++++.|.|.| +++||+||+.++++|++|+....|. .....|.++|||++|+|+++|++
T Consensus 1 m~~~~~~~~~~~~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~---------~~~~~~~~~g~e~~G~V~~vG~~ 71 (345)
T cd08287 1 MRATVIHGPGDIRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGV---------SPTRAPAPIGHEFVGVVEEVGSE 71 (345)
T ss_pred CceeEEecCCceeEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCC---------CCCCCCcccccceEEEEEEeCCC
Confidence 6788999888999999999986 9999999999999999999887732 22345789999999999999999
Q ss_pred CCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCC--ceEECCCCCCccccccc-----
Q 017793 94 VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAK--LCYKLPDNVSLEEGAMC----- 166 (366)
Q Consensus 94 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~--~~~~~P~~~~~~~aa~~----- 166 (366)
++.+++||+|++.+..+|+.|.+|..++...|.+..+++ ....|+|+||+.++.+ .++++|++++++.+...
T Consensus 72 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~v~~~~~~~~~lP~~l~~~~~~~~~~~~l 150 (345)
T cd08287 72 VTSVKPGDFVIAPFAISDGTCPFCRAGFTTSCVHGGFWG-AFVDGGQGEYVRVPLADGTLVKVPGSPSDDEDLLPSLLAL 150 (345)
T ss_pred CCccCCCCEEEeccccCCCCChhhhCcCcccCCCCCccc-CCCCCceEEEEEcchhhCceEECCCCCChhhhhhhhhHhh
Confidence 999999999998777889999999999999998766554 3467999999999975 99999999987322211
Q ss_pred -hhhHHHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHH
Q 017793 167 -EPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTD 245 (366)
Q Consensus 167 -~~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~ 245 (366)
..+.+|++++...+++++++++|+|+|++|++++|+|+..|+..++++++++++.++++++|++.++++.. .++...
T Consensus 151 ~~~~~~a~~~~~~~~~~~g~~vlI~g~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga~~v~~~~~--~~~~~~ 228 (345)
T cd08287 151 SDVMGTGHHAAVSAGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGATDIVAERG--EEAVAR 228 (345)
T ss_pred hcHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCceEecCCc--ccHHHH
Confidence 35778888887788999999999999999999999999999977899988888999999999988887643 355555
Q ss_pred HHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeecc-CCChHHHHHHH
Q 017793 246 VGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFL 324 (366)
Q Consensus 246 ~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l 324 (366)
+.++. .+.++|+++|++|++..+..++++++++|+++.+|.......++....+.++.++.+.... .+.++++++++
T Consensus 229 i~~~~--~~~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (345)
T cd08287 229 VRELT--GGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHGGVELDVRELFFRNVGLAGGPAPVRRYLPELLDDV 306 (345)
T ss_pred HHHhc--CCCCCCEEEECCCCHHHHHHHHHhhccCCEEEEecccCCCCccCHHHHHhcceEEEEecCCcHHHHHHHHHHH
Confidence 55443 3568999999999877899999999999999998865533333333456778888775443 56789999999
Q ss_pred HCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEee
Q 017793 325 RSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 365 (366)
Q Consensus 325 ~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~ 365 (366)
.++.+.+.+.+.+.+++ ++++++++.+.++.. .|++|+
T Consensus 307 ~~~~l~~~~~~~~~~~l--~~~~~a~~~~~~~~~-~k~~~~ 344 (345)
T cd08287 307 LAGRINPGRVFDLTLPL--DEVAEGYRAMDERRA-IKVLLR 344 (345)
T ss_pred HcCCCCHHHhEEeeecH--HHHHHHHHHHhCCCc-eEEEeC
Confidence 99998655556788888 999999999887755 499885
No 51
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=100.00 E-value=1.2e-40 Score=308.68 Aligned_cols=338 Identities=31% Similarity=0.533 Sum_probs=279.0
Q ss_pred ceEEEEeeCCceEEEEecCCCC-CCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCC
Q 017793 15 NMAAWLLGIKTLKIQPYHLPTL-GPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE 93 (366)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~p~~-~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~ 93 (366)
|+++++.+++.+++++.|.|+| .++||+||+.++++|+.|+.++.|.+. ...+|.++|+|++|+|+++|++
T Consensus 1 m~a~~~~~~~~~~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~--------~~~~~~~~g~e~~G~V~~~G~~ 72 (345)
T cd08286 1 MKALVYHGPGKISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVP--------TVTPGRILGHEGVGVVEEVGSA 72 (345)
T ss_pred CceEEEecCCceeEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCC--------CCCCCceecccceEEEEEeccC
Confidence 5788888888899999999986 899999999999999999998874321 1234789999999999999999
Q ss_pred CCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCC--ceEECCCCCCccccccch-hhH
Q 017793 94 VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAK--LCYKLPDNVSLEEGAMCE-PLS 170 (366)
Q Consensus 94 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~--~~~~~P~~~~~~~aa~~~-~~~ 170 (366)
++.+++||+|++.+...|+.|.+|..+....|....+..+....|+|+||+.++.+ .++++|++++.++++.+. .+.
T Consensus 73 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~ 152 (345)
T cd08286 73 VTNFKVGDRVLISCISSCGTCGYCRKGLYSHCESGGWILGNLIDGTQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDILP 152 (345)
T ss_pred ccccCCCCEEEECCcCCCCCChHHHCcCcccCCCcccccccccCCeeeeEEEcccccCceEECCCCCCHHHhhhccchhH
Confidence 99999999999998888999999999888888876554333457999999999987 899999999999888774 778
Q ss_pred HHHHHH-HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHH
Q 017793 171 VGVHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKI 249 (366)
Q Consensus 171 ~a~~~l-~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~ 249 (366)
+||.++ ...++++++++||+|+|++|++++|+|+.+|+..++++++++++.++++++|++.++++.. .++...+..+
T Consensus 153 ta~~~~~~~~~~~~g~~vlI~g~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~--~~~~~~i~~~ 230 (345)
T cd08286 153 TGYECGVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNSAK--GDAIEQVLEL 230 (345)
T ss_pred HHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCceecccc--ccHHHHHHHH
Confidence 888865 5678899999999999999999999999999447888888999999999999988877543 4555555544
Q ss_pred HHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeeccCCChHHHHHHHHCCCC
Q 017793 250 QNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKI 329 (366)
Q Consensus 250 ~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~ 329 (366)
. .+.++|++|||+|....+..++++|+++|+++.+|.......++...++.++.++.+.......+++++++++++.+
T Consensus 231 ~--~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 308 (345)
T cd08286 231 T--DGRGVDVVIEAVGIPATFELCQELVAPGGHIANVGVHGKPVDLHLEKLWIKNITITTGLVDTNTTPMLLKLVSSGKL 308 (345)
T ss_pred h--CCCCCCEEEECCCCHHHHHHHHHhccCCcEEEEecccCCCCCcCHHHHhhcCcEEEeecCchhhHHHHHHHHHcCCC
Confidence 3 35679999999998778899999999999999998654434444445566788887755444678889999999998
Q ss_pred CCCCceEEEecCChhhHHHHHHHHHcCC--CceEEEeeC
Q 017793 330 DVKPLITHRFGFTQKEIEDAFEISAQGG--NAIKVMFNL 366 (366)
Q Consensus 330 ~~~~~~~~~~~l~~~~~~~a~~~~~~~~--~~gkvvi~~ 366 (366)
.+.+.++++|++ ++++++++.+++.. ...|++|++
T Consensus 309 ~~~~~~~~~~~l--~~~~~a~~~~~~~~~~~~~k~~~~~ 345 (345)
T cd08286 309 DPSKLVTHRFKL--SEIEKAYDTFSAAAKHKALKVIIDF 345 (345)
T ss_pred ChHHcEEeEeeH--HHHHHHHHHHhccCCCCeeEEEEeC
Confidence 665667788999 99999999998764 345988864
No 52
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=100.00 E-value=9.4e-41 Score=311.79 Aligned_cols=336 Identities=32% Similarity=0.530 Sum_probs=279.1
Q ss_pred ceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCC
Q 017793 15 NMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE 93 (366)
Q Consensus 15 ~~~~~~~~~-~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~ 93 (366)
||+.++.++ ..+++++.|.|.++++||+||+.++++|++|+.+.. +..+..+|.++|+|++|+|+++|++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~---------~~~~~~~p~~~g~e~~G~v~~vG~~ 71 (367)
T cd08263 1 MKAAVLKGPNPPLTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLK---------GELPFPPPFVLGHEISGEVVEVGPN 71 (367)
T ss_pred CeeEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEeeeCcchHHHhc---------CCCCCCCCcccccccceEEEEeCCC
Confidence 577888776 568999999999999999999999999999998877 3333456789999999999999999
Q ss_pred CCC---CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCC---------------------CCCCcceEEEEecCC
Q 017793 94 VKS---LEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSP---------------------PTNGSLAHKVVHPAK 149 (366)
Q Consensus 94 v~~---~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~g~~~e~~~~~~~ 149 (366)
+++ |++||+|++.+..+||.|.+|..+..++|++..++... ...|+|++|+.++.+
T Consensus 72 ~~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 151 (367)
T cd08263 72 VENPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEYAVVPAT 151 (367)
T ss_pred CCCCCcCCCCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccccccCCcceeEEEechh
Confidence 988 99999999998899999999999999999986533210 236999999999999
Q ss_pred ceEECCCCCCccccccch-hhHHHHHHHHh-CCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc
Q 017793 150 LCYKLPDNVSLEEGAMCE-PLSVGVHACRR-ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL 227 (366)
Q Consensus 150 ~~~~~P~~~~~~~aa~~~-~~~~a~~~l~~-~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l 227 (366)
.++++|+++++.+++.+. .+.+||.++.. ..++++++|||+|+|++|++++++|+..|+..++++++++++.++++++
T Consensus 152 ~~~~~P~~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~~~ 231 (367)
T cd08263 152 ALAPLPESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKEL 231 (367)
T ss_pred hEEECCCCCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHh
Confidence 999999999999998776 78899999854 6778999999999999999999999999996588888889999999999
Q ss_pred CCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCC--ceeechHhhhcCc
Q 017793 228 GADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE--MTVALTPAAAREV 305 (366)
Q Consensus 228 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~ 305 (366)
|++.++++. ..++...+.... .+.++|++||++++.+....++++|+++|+++.++..... ..+....++.++.
T Consensus 232 g~~~v~~~~--~~~~~~~l~~~~--~~~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~ 307 (367)
T cd08263 232 GATHTVNAA--KEDAVAAIREIT--GGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGGATAEIPITRLVRRGI 307 (367)
T ss_pred CCceEecCC--cccHHHHHHHHh--CCCCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCCCCccccCHHHHhhCCe
Confidence 998887753 345655555443 3577999999999865788899999999999999855432 2233334446777
Q ss_pred EEEEeecc--CCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEee
Q 017793 306 DVIGIFRY--RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 365 (366)
Q Consensus 306 ~~~~~~~~--~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~ 365 (366)
++.+++.. .+.+++++++++++.+.+.+.+++.+++ +++.++++.+.++...||+|++
T Consensus 308 ~~~~~~~~~~~~~~~~~~~ll~~~~l~~~~~~~~~~~~--~~~~~a~~~~~~~~~~g~~~~~ 367 (367)
T cd08263 308 KIIGSYGARPRQDLPELVGLAASGKLDPEALVTHKYKL--EEINEAYENLRKGLIHGRAIVE 367 (367)
T ss_pred EEEecCCCCcHHHHHHHHHHHHcCCCCcccceeEEecH--HHHHHHHHHHhcCCccceeeeC
Confidence 77776543 3578899999999999655556788888 9999999999999889999974
No 53
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=100.00 E-value=2.2e-40 Score=305.92 Aligned_cols=335 Identities=38% Similarity=0.673 Sum_probs=276.1
Q ss_pred ceEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCCC
Q 017793 15 NMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEV 94 (366)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v 94 (366)
|+++++..+..+++.+.|.|++.++|++|+|.++++|+.|+....+.+ ....+|.++|+|++|+|+++|+++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~--------~~~~~~~~~g~e~~G~V~~~G~~v 72 (337)
T cd08261 1 MKALVCEKPGRLEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRN--------PFASYPRILGHELSGEVVEVGEGV 72 (337)
T ss_pred CeEEEEeCCCceEEEECCCCCCCCCeEEEEEEEEeEcccChHHHcCCC--------CcCCCCcccccccEEEEEEeCCCC
Confidence 578888888889999999999999999999999999999998877321 112347789999999999999999
Q ss_pred CCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccchhhHHHHH
Q 017793 95 KSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVH 174 (366)
Q Consensus 95 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~~~~~a~~ 174 (366)
+.|++||+|+..+..+|+.|..|+.+++++|.....++ ....|+|++|+.++++ ++++|++++++++++++.+.++++
T Consensus 73 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~v~v~~~-~~~~p~~~~~~~aa~~~~~~~a~~ 150 (337)
T cd08261 73 AGLKVGDRVVVDPYISCGECYACRKGRPNCCENLQVLG-VHRDGGFAEYIVVPAD-ALLVPEGLSLDQAALVEPLAIGAH 150 (337)
T ss_pred CCCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCeee-ecCCCcceeEEEechh-eEECCCCCCHHHhhhhchHHHHHH
Confidence 99999999999888899999999999999995432211 1247999999999999 999999999999987777778888
Q ss_pred HHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhC
Q 017793 175 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMG 254 (366)
Q Consensus 175 ~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (366)
++...+++++++|||+|+|.+|++++|+|+.+|+ .++++.+++++.++++++|++.++++.. .++...+.++. .+
T Consensus 151 ~~~~~~l~~g~~vLI~g~g~vG~~a~~lA~~~g~-~v~~~~~s~~~~~~~~~~g~~~v~~~~~--~~~~~~l~~~~--~~ 225 (337)
T cd08261 151 AVRRAGVTAGDTVLVVGAGPIGLGVIQVAKARGA-RVIVVDIDDERLEFARELGADDTINVGD--EDVAARLRELT--DG 225 (337)
T ss_pred HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEECCCHHHHHHHHHhCCCEEecCcc--cCHHHHHHHHh--CC
Confidence 8867889999999999989999999999999999 5777878899999999999998887643 45666665543 25
Q ss_pred CCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeecc-CCChHHHHHHHHCCCCCCCC
Q 017793 255 SGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKP 333 (366)
Q Consensus 255 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~~~ 333 (366)
.++|++||++|+...+..++++|+++|+++.++............+..+.+++.+.... .+.+++++++++++.+.+.+
T Consensus 226 ~~vd~vld~~g~~~~~~~~~~~l~~~G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~~~~ 305 (337)
T cd08261 226 EGADVVIDATGNPASMEEAVELVAHGGRVVLVGLSKGPVTFPDPEFHKKELTILGSRNATREDFPDVIDLLESGKVDPEA 305 (337)
T ss_pred CCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEcCCCCCCccCHHHHHhCCCEEEEeccCChhhHHHHHHHHHcCCCChhh
Confidence 67999999998777889999999999999998855433333333455566777665433 45788999999999996533
Q ss_pred ceEEEecCChhhHHHHHHHHHcC-CCceEEEeeC
Q 017793 334 LITHRFGFTQKEIEDAFEISAQG-GNAIKVMFNL 366 (366)
Q Consensus 334 ~~~~~~~l~~~~~~~a~~~~~~~-~~~gkvvi~~ 366 (366)
.+...+++ +++.++++.+.++ ...+|+|+++
T Consensus 306 ~~~~~~~~--~~~~~a~~~~~~~~~~~~k~v~~~ 337 (337)
T cd08261 306 LITHRFPF--EDVPEAFDLWEAPPGGVIKVLIEF 337 (337)
T ss_pred heEEEeeH--HHHHHHHHHHhcCCCceEEEEEeC
Confidence 56678888 9999999999988 4789999875
No 54
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=100.00 E-value=1.6e-40 Score=311.64 Aligned_cols=345 Identities=28% Similarity=0.499 Sum_probs=274.0
Q ss_pred cccceEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeC
Q 017793 12 KNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVG 91 (366)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG 91 (366)
.+.+...++.. ..++++++|.|+++++||+||+.++++|++|++...+.. .+.........+|.++|||++|+|+++|
T Consensus 26 ~~~~~~~~~~~-~~~~~~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~-~~~~~~~~~~~~~~~~g~e~~G~V~~vG 103 (384)
T cd08265 26 LTNLGSKVWRY-PELRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDK-DGYILYPGLTEFPVVIGHEFSGVVEKTG 103 (384)
T ss_pred hccceeEEEeC-CCEEEEECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCC-CcccccCcccCCCcccccceEEEEEEEC
Confidence 34445555554 479999999999999999999999999999998765210 0000000113467899999999999999
Q ss_pred CCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCC-------CCccccc
Q 017793 92 SEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDN-------VSLEEGA 164 (366)
Q Consensus 92 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~-------~~~~~aa 164 (366)
++++.|++||+|++.+..+|+.|..|+.+++.+|..+...+. ...|+|++|+.++++.++++|++ ++.+.|+
T Consensus 104 ~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~-~~~g~~~~~v~v~~~~~~~lP~~~~~~~~~~~~~~a~ 182 (384)
T cd08265 104 KNVKNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKELGF-SADGAFAEYIAVNARYAWEINELREIYSEDKAFEAGA 182 (384)
T ss_pred CCCCCCCCCCEEEECCCCCCCCChhhhCcCcccCCCcceeee-cCCCcceeeEEechHHeEECCccccccccCCCHHHhh
Confidence 999999999999999999999999999999999998775553 24799999999999999999986 4555555
Q ss_pred cchhhHHHHHHHH-h-CCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCC-Ccc
Q 017793 165 MCEPLSVGVHACR-R-ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTD-IED 241 (366)
Q Consensus 165 ~~~~~~~a~~~l~-~-~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~-~~~ 241 (366)
...++++||+++. . .++++|++|||+|+|++|++++|+|+..|+..|+++++++++.++++++|++.++++... ..+
T Consensus 183 ~~~~~~ta~~al~~~~~~~~~g~~VlV~g~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~ 262 (384)
T cd08265 183 LVEPTSVAYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERRNLAKEMGADYVFNPTKMRDCL 262 (384)
T ss_pred hhhHHHHHHHHHHhhcCCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEccccccccc
Confidence 5568889999983 4 689999999999999999999999999999778999888899999999999888765432 225
Q ss_pred hHHHHHHHHHhhCCCCcEEEEcCCCh-HHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeecc--CCChH
Q 017793 242 VDTDVGKIQNAMGSGIDVSFDCVGFD-KTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY--RSTWP 318 (366)
Q Consensus 242 ~~~~~~~~~~~~~~~~d~vld~~g~~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 318 (366)
+...+.++. .+.++|+++|+.|.. ..+..++++|+++|+++.+|.......+....+..+..++.+.... ...++
T Consensus 263 ~~~~v~~~~--~g~gvDvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 340 (384)
T cd08265 263 SGEKVMEVT--KGWGADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAATTVPLHLEVLQVRRAQIVGAQGHSGHGIFP 340 (384)
T ss_pred HHHHHHHhc--CCCCCCEEEECCCCcHHHHHHHHHHHHcCCEEEEECCCCCCCcccHHHHhhCceEEEEeeccCCcchHH
Confidence 556555543 356899999999863 4678899999999999999865433333444555666777776543 45799
Q ss_pred HHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEe
Q 017793 319 LCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF 364 (366)
Q Consensus 319 ~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi 364 (366)
+++++++++.+.+...+++.|++ +++++|++.+.++ ..||+++
T Consensus 341 ~~~~ll~~g~l~~~~~~~~~~~~--~~~~~a~~~~~~~-~~~kvvv 383 (384)
T cd08265 341 SVIKLMASGKIDMTKIITARFPL--EGIMEAIKAASER-TDGKITI 383 (384)
T ss_pred HHHHHHHcCCCChHHheEEEeeH--HHHHHHHHHHhcC-CCceEEe
Confidence 99999999999655457788999 9999999997665 6788876
No 55
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=100.00 E-value=3.1e-40 Score=305.70 Aligned_cols=335 Identities=38% Similarity=0.665 Sum_probs=281.1
Q ss_pred ceEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCCC
Q 017793 15 NMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEV 94 (366)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v 94 (366)
|+++++.+++.+.+++.|.|++.+++|+||++++++|+.|+.+..|... +...|.++|+|++|+|+++|+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~--------~~~~~~~~g~~~~G~V~~~G~~v 72 (343)
T cd08235 1 MKAAVLHGPNDVRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHT--------DLKPPRILGHEIAGEIVEVGDGV 72 (343)
T ss_pred CeEEEEecCCceEEEEccCCCCCCCeEEEEEEEeeeccccHHHHcCCCc--------cCCCCcccccceEEEEEeeCCCC
Confidence 5788888888899999999999999999999999999999988773210 13447789999999999999999
Q ss_pred CCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCc-----eEECCCCCCccccccchhh
Q 017793 95 KSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKL-----CYKLPDNVSLEEGAMCEPL 169 (366)
Q Consensus 95 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~-----~~~~P~~~~~~~aa~~~~~ 169 (366)
+.|++||+|++.+..+|+.|.+|..+...+|+...+.+. ...|+|++|+.++.+. ++++|+++++.+|+.+.++
T Consensus 73 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~v~v~~~~~~~~~~~~lP~~~~~~~aa~~~~~ 151 (343)
T cd08235 73 TGFKVGDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGN-LYDGGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALVEPL 151 (343)
T ss_pred CCCCCCCEEEEccCCCCCCChHHHCcCcccCCCcceecc-CCCCcceeeEEecccccccccEEECCCCCCHHHHHhhhHH
Confidence 999999999999999999999999999999998766543 3579999999999999 9999999999999877778
Q ss_pred HHHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHH
Q 017793 170 SVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKI 249 (366)
Q Consensus 170 ~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~ 249 (366)
.+|++++...+++++++|||+|+|.+|++++|+|+..|++.++++.+++++.+.++++|.+.+++++ ..++...+.++
T Consensus 152 ~~a~~~l~~~~~~~g~~VlV~g~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~~~~~~--~~~~~~~i~~~ 229 (343)
T cd08235 152 ACCINAQRKAGIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTIDAA--EEDLVEKVREL 229 (343)
T ss_pred HHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEecCC--ccCHHHHHHHH
Confidence 8899998777899999999999899999999999999995488888899999998999998877654 34666666554
Q ss_pred HHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCC--ceeechHhhhcCcEEEEeecc-CCChHHHHHHHHC
Q 017793 250 QNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE--MTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRS 326 (366)
Q Consensus 250 ~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~ 326 (366)
. .+.++|+++||+++.......+++++++|+++.++..... ..........+++++.+.... .+.++++++++++
T Consensus 230 ~--~~~~vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~ 307 (343)
T cd08235 230 T--DGRGADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKGSTVNIDPNLIHYREITITGSYAASPEDYKEALELIAS 307 (343)
T ss_pred h--CCcCCCEEEECCCChHHHHHHHHHhhcCCEEEEEeccCCCCCcccCHHHHhhCceEEEEEecCChhhHHHHHHHHHc
Confidence 3 3567999999999777888999999999999998854332 223334566777888776554 5678899999999
Q ss_pred CCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEee
Q 017793 327 GKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 365 (366)
Q Consensus 327 g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~ 365 (366)
+.+.+.+.+...|++ +++.++++.+.+++ .||+|++
T Consensus 308 ~~l~~~~~~~~~~~~--~~~~~a~~~~~~~~-~~k~vi~ 343 (343)
T cd08235 308 GKIDVKDLITHRFPL--EDIEEAFELAADGK-SLKIVIT 343 (343)
T ss_pred CCCChHHheeeEeeH--HHHHHHHHHHhCCC-cEEEEeC
Confidence 998654456678888 99999999999998 9999974
No 56
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=100.00 E-value=2.1e-40 Score=307.60 Aligned_cols=341 Identities=27% Similarity=0.408 Sum_probs=278.2
Q ss_pred ceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccc----cCccCCCCcccccceeEEEEE
Q 017793 15 NMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRC----ANFIVKKPMVIGHECAGIIEE 89 (366)
Q Consensus 15 ~~~~~~~~~-~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~----~~~~~~~p~i~G~e~~G~V~~ 89 (366)
||+.++..+ .++++++.|.|+++++||+||+.++++|++|+....|.+...... ......+|.++|+|++|+|++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~ 80 (350)
T cd08240 1 MKAAAVVEPGKPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEVVA 80 (350)
T ss_pred CeeEEeccCCCCceEEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEEEEe
Confidence 577777755 458999999999999999999999999999999887532110000 000124567899999999999
Q ss_pred eCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-h
Q 017793 90 VGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-P 168 (366)
Q Consensus 90 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~ 168 (366)
+|++++.+++||+|++.+...|+.|..|..++.++|....+.+. ...|++++|+.++.+.++++|+++++.+++.+. .
T Consensus 81 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~p~~~s~~~aa~l~~~ 159 (350)
T cd08240 81 VGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRALGI-FQDGGYAEYVIVPHSRYLVDPGGLDPALAATLACS 159 (350)
T ss_pred eCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCceee-eccCcceeeEEecHHHeeeCCCCCCHHHeehhhch
Confidence 99999999999999999999999999999999999988655553 367999999999999999999999999988765 7
Q ss_pred hHHHHHHHHh-CCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHH
Q 017793 169 LSVGVHACRR-ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVG 247 (366)
Q Consensus 169 ~~~a~~~l~~-~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~ 247 (366)
+.+||++++. ..++++++|||+|+|++|++++|+|+..|++.|+++++++++.+.++++|++.+++.. ..++...+.
T Consensus 160 ~~tA~~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~ 237 (350)
T cd08240 160 GLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKAAGADVVVNGS--DPDAAKRII 237 (350)
T ss_pred hhhHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCcEEecCC--CccHHHHHH
Confidence 8899999865 4456899999999999999999999999997788888899999999999998776642 234444454
Q ss_pred HHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeecc-CCChHHHHHHHHC
Q 017793 248 KIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRS 326 (366)
Q Consensus 248 ~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~ 326 (366)
+.. ++++|++||++|.......++++|+++|+++.+|..............+++.++.+.+.. .+++.++++++++
T Consensus 238 ~~~---~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ll~~ 314 (350)
T cd08240 238 KAA---GGGVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGEATLPLPLLPLRALTIQGSYVGSLEELRELVALAKA 314 (350)
T ss_pred HHh---CCCCcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCCCCcccHHHHhhcCcEEEEcccCCHHHHHHHHHHHHc
Confidence 443 338999999999777899999999999999999865543334444455678888887654 4678899999999
Q ss_pred CCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEee
Q 017793 327 GKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 365 (366)
Q Consensus 327 g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~ 365 (366)
+.+. +.....|++ ++++++++.+.+++..||++++
T Consensus 315 ~~i~--~~~~~~~~~--~~~~~a~~~~~~~~~~gkvvv~ 349 (350)
T cd08240 315 GKLK--PIPLTERPL--SDVNDALDDLKAGKVVGRAVLK 349 (350)
T ss_pred CCCc--cceeeEEcH--HHHHHHHHHHHcCCccceEEec
Confidence 9984 335567888 9999999999999999999985
No 57
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=100.00 E-value=3e-40 Score=308.99 Aligned_cols=334 Identities=27% Similarity=0.443 Sum_probs=270.4
Q ss_pred ceEEEEeeCCceEEEEecCCCC-CCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCC
Q 017793 15 NMAAWLLGIKTLKIQPYHLPTL-GPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE 93 (366)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~p~~-~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~ 93 (366)
|++.++.+++.++++++|.|++ +++||+||+.++++|++|++...|. .....|.++|||++|+|+++|++
T Consensus 1 m~~~~~~~~~~~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~---------~~~~~p~~~g~e~~G~V~~vG~~ 71 (375)
T cd08282 1 MKAVVYGGPGNVAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGR---------TGAEPGLVLGHEAMGEVEEVGSA 71 (375)
T ss_pred CceEEEecCCceeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCC---------CCCCCCceeccccEEEEEEeCCC
Confidence 4677787888999999999996 8999999999999999999988732 22345889999999999999999
Q ss_pred CCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccc---------cCCCCCCCcceEEEEecCC--ceEECCCCCCccc
Q 017793 94 VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRF---------FGSPPTNGSLAHKVVHPAK--LCYKLPDNVSLEE 162 (366)
Q Consensus 94 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~g~~~e~~~~~~~--~~~~~P~~~~~~~ 162 (366)
++.+++||+|++.+..+|+.|..|..++..+|.+..+ .+....+|+|+||++++.+ .++++|+++++++
T Consensus 72 v~~~~~Gd~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~~lP~~~~~~~ 151 (375)
T cd08282 72 VESLKVGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPYADFNLLKLPDRDGAKE 151 (375)
T ss_pred CCcCCCCCEEEEeCCCCCCCCHHHHCcCcccCCCCCcccccccccccccCCCCCeeeeEEEeecccCcEEECCCCCChhh
Confidence 9999999999999999999999999999999986421 1122346999999999976 8999999999884
Q ss_pred ---cccc-hhhHHHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCC
Q 017793 163 ---GAMC-EPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTD 238 (366)
Q Consensus 163 ---aa~~-~~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~ 238 (366)
++.+ ..+.+||+++..+.+++|++|||+|+|++|++++|+|+..|+..++++++++++.++++++|+. .+++.
T Consensus 152 ~~~~a~~~~~~~ta~~a~~~~~~~~g~~vlI~g~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~~g~~-~v~~~-- 228 (375)
T cd08282 152 KDDYLMLSDIFPTGWHGLELAGVQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGAI-PIDFS-- 228 (375)
T ss_pred hhheeeecchHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCe-EeccC--
Confidence 4444 4788999999778899999999999999999999999999986688898999999999999984 44432
Q ss_pred CcchHHHHHHHHHhhCCCCcEEEEcCCChH-----------HHHHHHHhhcCCceEEEEcccCCC-------------ce
Q 017793 239 IEDVDTDVGKIQNAMGSGIDVSFDCVGFDK-----------TMSTALNATRPGGKVCLIGLAKTE-------------MT 294 (366)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~d~vld~~g~~~-----------~~~~~~~~l~~~G~~v~~g~~~~~-------------~~ 294 (366)
..++...+.++. ++++|+++||+|+.. .++.++++++++|+++.+|..... ..
T Consensus 229 ~~~~~~~i~~~~---~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~ 305 (375)
T cd08282 229 DGDPVEQILGLE---PGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVYVAEDPGAGDAAAKQGELS 305 (375)
T ss_pred cccHHHHHHHhh---CCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEeccCCcccccccccccCcccc
Confidence 245555555442 467999999999763 588899999999999888753311 11
Q ss_pred eechHhhhcCcEEEEeecc-CCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793 295 VALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 366 (366)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~ 366 (366)
+....++.++..+.+.... ...+++++++++++.+.+...+.+.|++ ++++++++.+.++. .+|+|++.
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l--~~~~~a~~~~~~~~-~~kvvv~~ 375 (375)
T cd08282 306 FDFGLLWAKGLSFGTGQAPVKKYNRQLRDLILAGRAKPSFVVSHVISL--EDAPEAYARFDKRL-ETKVVIKP 375 (375)
T ss_pred ccHHHHHhcCcEEEEecCCchhhHHHHHHHHHcCCCChHHcEEEEeeH--HHHHHHHHHHhcCC-ceEEEeCC
Confidence 2333455566666655443 5678889999999999654457899999 99999999999998 89999863
No 58
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=100.00 E-value=2.8e-40 Score=308.07 Aligned_cols=334 Identities=33% Similarity=0.529 Sum_probs=274.2
Q ss_pred ceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCC
Q 017793 15 NMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE 93 (366)
Q Consensus 15 ~~~~~~~~~-~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~ 93 (366)
||++++.++ +.++++++|.|++++++|+||+.++++|+.|+.+.. +.+...+|.++|+|++|+|+++|++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~---------g~~~~~~~~~~g~e~~G~V~~vG~~ 71 (363)
T cd08279 1 MRAAVLHEVGKPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVT---------GDLPAPLPAVLGHEGAGVVEEVGPG 71 (363)
T ss_pred CeEEEEecCCCCceEEEeeCCCCCCCeEEEEEEEeecCcHHHHHhc---------CCCCCCCCccccccceEEEEEeCCC
Confidence 678888876 678999999999999999999999999999998877 3333456789999999999999999
Q ss_pred CCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccc---------------CC----CCCCCcceEEEEecCCceEEC
Q 017793 94 VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF---------------GS----PPTNGSLAHKVVHPAKLCYKL 154 (366)
Q Consensus 94 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~----~~~~g~~~e~~~~~~~~~~~~ 154 (366)
++.|++||+|++.+..+|++|.+|+.++.+.|++...+ +. ....|+|+||+.++.+.++++
T Consensus 72 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l 151 (363)
T cd08279 72 VTGVKPGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKI 151 (363)
T ss_pred ccccCCCCEEEECCCCCCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCccceeeEEeccccEEEC
Confidence 99999999999999999999999999999999875321 00 024699999999999999999
Q ss_pred CCCCCccccccch-hhHHHHHHH-HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCcee
Q 017793 155 PDNVSLEEGAMCE-PLSVGVHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADET 232 (366)
Q Consensus 155 P~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~ 232 (366)
|+++++++++.+. .+.+||.++ ...+++++++|||+|+|++|++++++|+..|+.+|+++++++++.++++++|++.+
T Consensus 152 p~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~~g~~~v 231 (363)
T cd08279 152 DDDIPLDRAALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHT 231 (363)
T ss_pred CCCCChHHeehhcchhHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHhCCeEE
Confidence 9999999988776 678888876 45789999999999989999999999999999668888899999999999999877
Q ss_pred eecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCC--CceeechHhhhcCcEEEEe
Q 017793 233 AKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT--EMTVALTPAAAREVDVIGI 310 (366)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~ 310 (366)
+++. ..++...+..+. .+.++|++||++++...+..++++|+++|+++.+|.... ...+....+..+...+.+.
T Consensus 232 v~~~--~~~~~~~l~~~~--~~~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (363)
T cd08279 232 VNAS--EDDAVEAVRDLT--DGRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPPGETVSLPALELFLSEKRLQGS 307 (363)
T ss_pred eCCC--CccHHHHHHHHc--CCCCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCCCcccccCHHHHhhcCcEEEEE
Confidence 6643 245655555443 256799999999977788999999999999999975542 2233444455556666655
Q ss_pred ec----cCCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEE
Q 017793 311 FR----YRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVM 363 (366)
Q Consensus 311 ~~----~~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvv 363 (366)
+. ....+++++++++++.+.+.+.+.++|++ +++++|++.+.+++..+.++
T Consensus 308 ~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~--~~~~~a~~~~~~~~~~~~~~ 362 (363)
T cd08279 308 LYGSANPRRDIPRLLDLYRAGRLKLDELVTRRYSL--DEINEAFADMLAGENARGVI 362 (363)
T ss_pred EecCcCcHHHHHHHHHHHHcCCCCcceeEEEEEcH--HHHHHHHHHHhcCCceeEEe
Confidence 32 24578899999999999655557788888 99999999999887765554
No 59
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=100.00 E-value=3.9e-40 Score=305.08 Aligned_cols=333 Identities=39% Similarity=0.668 Sum_probs=276.3
Q ss_pred ceEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCCC
Q 017793 15 NMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEV 94 (366)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v 94 (366)
|+++++.+.+.+.+++.|+|+++++||+||+.++++|+.|+....+ ......|.++|+|++|+|+++|+++
T Consensus 1 ~~a~~~~~~~~l~~~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~---------~~~~~~~~~~g~~~~G~V~~~g~~v 71 (343)
T cd08236 1 MKALVLTGPGDLRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLG---------TGAYHPPLVLGHEFSGTVEEVGSGV 71 (343)
T ss_pred CeeEEEecCCceeEEecCCCCCCCCeEEEEEEEEEECccchHhhcC---------CCCCCCCcccCcceEEEEEEECCCC
Confidence 5788888778899999999999999999999999999999987763 2233457889999999999999999
Q ss_pred CCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccchhhHHHHH
Q 017793 95 KSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVH 174 (366)
Q Consensus 95 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~~~~~a~~ 174 (366)
+.|++||+|+..+...|+.|.+|..+.+..|+...+.+. ...|+|++|+.++.+.++++|+++++++++.++.+.+||.
T Consensus 72 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~lP~~~~~~~aa~~~~~~ta~~ 150 (343)
T cd08236 72 DDLAVGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGS-RRDGAFAEYVSVPARNLIKIPDHVDYEEAAMIEPAAVALH 150 (343)
T ss_pred CcCCCCCEEEEcCCCCCCCChhHHCcChhhCCCcceEec-ccCCcccceEEechHHeEECcCCCCHHHHHhcchHHHHHH
Confidence 999999999999888999999999999999888765553 3679999999999999999999999999988777889999
Q ss_pred HHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhC
Q 017793 175 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMG 254 (366)
Q Consensus 175 ~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (366)
++...+++++++|||+|+|.+|++++|+|+.+|++.++++++++++.++++++|++.++++.. .. ...+.... .+
T Consensus 151 ~l~~~~~~~~~~vlI~g~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~--~~-~~~~~~~~--~~ 225 (343)
T cd08236 151 AVRLAGITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKE--ED-VEKVRELT--EG 225 (343)
T ss_pred HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCcc--cc-HHHHHHHh--CC
Confidence 987788999999999998999999999999999965888888888999999999988777543 23 44444333 35
Q ss_pred CCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCce---eechHhhhcCcEEEEeecc------CCChHHHHHHHH
Q 017793 255 SGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMT---VALTPAAAREVDVIGIFRY------RSTWPLCIEFLR 325 (366)
Q Consensus 255 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~---~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~ 325 (366)
.++|++|||+|....+..++++|+++|+++.+|....... .+...+..++.++.+.+.. .+.+++++++++
T Consensus 226 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (343)
T cd08236 226 RGADLVIEAAGSPATIEQALALARPGGKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYSAPFPGDEWRTALDLLA 305 (343)
T ss_pred CCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeeccccccchhhHHHHHHHHH
Confidence 6799999999877788999999999999999985543211 1223345677777776543 356888999999
Q ss_pred CCCCCCCCceEEEecCChhhHHHHHHHHHc-CCCceEEEe
Q 017793 326 SGKIDVKPLITHRFGFTQKEIEDAFEISAQ-GGNAIKVMF 364 (366)
Q Consensus 326 ~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~-~~~~gkvvi 364 (366)
++.+.+.+.+.+.+++ ++++++++.+++ +...||+|+
T Consensus 306 ~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~k~v~ 343 (343)
T cd08236 306 SGKIKVEPLITHRLPL--EDGPAAFERLADREEFSGKVLL 343 (343)
T ss_pred cCCCChHHheeeeecH--HHHHHHHHHHHcCCCCeeEEeC
Confidence 9998544456678888 999999999998 667888875
No 60
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=100.00 E-value=3.5e-40 Score=304.71 Aligned_cols=331 Identities=26% Similarity=0.441 Sum_probs=271.2
Q ss_pred ceEEEEeeCCceE-EEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCC
Q 017793 15 NMAAWLLGIKTLK-IQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE 93 (366)
Q Consensus 15 ~~~~~~~~~~~~~-~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~ 93 (366)
||++++..++... +++.|.|.++++||+|||+++++|++|+....|. .+...|.++|+|++|+|+++|++
T Consensus 1 mka~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~---------~~~~~~~~~g~e~~G~V~~~G~~ 71 (338)
T PRK09422 1 MKAAVVNKDHTGDVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGD---------FGDKTGRILGHEGIGIVKEVGPG 71 (338)
T ss_pred CeEEEecCCCCCceEEEecCCCCCCCeEEEEEEEEeechhHHHHHcCC---------CCCCCCccCCcccceEEEEECCC
Confidence 6888898776555 8999999999999999999999999999887732 22234678999999999999999
Q ss_pred CCCCCCCCEEEEcC-CcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhHH
Q 017793 94 VKSLEVGDRVALEP-GISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSV 171 (366)
Q Consensus 94 v~~~~~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~~ 171 (366)
++.|++||+|++.+ ..+|+.|.+|..+..++|.+....+. ...|+|+||+.++.+.++++|+++++++++.+. .+.+
T Consensus 72 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~t 150 (338)
T PRK09422 72 VTSLKVGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNAGY-TVDGGMAEQCIVTADYAVKVPEGLDPAQASSITCAGVT 150 (338)
T ss_pred CccCCCCCEEEEccCCCCCCCChhhcCCCcccCCCccccCc-cccCcceeEEEEchHHeEeCCCCCCHHHeehhhcchhH
Confidence 99999999999754 46899999999999999987654432 457999999999999999999999999998775 7788
Q ss_pred HHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHH-CCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHH
Q 017793 172 GVHACRRANVGPETNVMIMGSGPIGLVTLLAARA-FGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQ 250 (366)
Q Consensus 172 a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~-~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~ 250 (366)
||+++..++++++++|||+|+|++|++++|+|+. .|+ .++++++++++.++++++|++.++++.. ..++...+.+..
T Consensus 151 a~~~~~~~~~~~g~~vlV~g~g~vG~~~~~la~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~-~~~~~~~v~~~~ 228 (338)
T PRK09422 151 TYKAIKVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNA-KVIAVDINDDKLALAKEVGADLTINSKR-VEDVAKIIQEKT 228 (338)
T ss_pred HHHHHHhcCCCCCCEEEEECCcHHHHHHHHHHHHhCCC-eEEEEeCChHHHHHHHHcCCcEEecccc-cccHHHHHHHhc
Confidence 9999877889999999999999999999999998 498 6888889999999999999988877532 134445554432
Q ss_pred HhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeecc-CCChHHHHHHHHCCCC
Q 017793 251 NAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKI 329 (366)
Q Consensus 251 ~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~ 329 (366)
+ ++|+++.+.++...+..++++++++|+++.+|........+......+..++.+.+.. .+.+++++++++++.+
T Consensus 229 ---~-~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l 304 (338)
T PRK09422 229 ---G-GAHAAVVTAVAKAAFNQAVDAVRAGGRVVAVGLPPESMDLSIPRLVLDGIEVVGSLVGTRQDLEEAFQFGAEGKV 304 (338)
T ss_pred ---C-CCcEEEEeCCCHHHHHHHHHhccCCCEEEEEeeCCCCceecHHHHhhcCcEEEEecCCCHHHHHHHHHHHHhCCC
Confidence 3 6895555555567899999999999999999865443344445566677888776543 4578899999999988
Q ss_pred CCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793 330 DVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 366 (366)
Q Consensus 330 ~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~ 366 (366)
.+.+ ..+++ ++++++++.+.++...||+++++
T Consensus 305 --~~~v-~~~~~--~~~~~a~~~~~~~~~~gkvvv~~ 336 (338)
T PRK09422 305 --VPKV-QLRPL--EDINDIFDEMEQGKIQGRMVIDF 336 (338)
T ss_pred --CccE-EEEcH--HHHHHHHHHHHcCCccceEEEec
Confidence 4444 45788 99999999999999999999864
No 61
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=100.00 E-value=2.7e-40 Score=305.23 Aligned_cols=326 Identities=26% Similarity=0.416 Sum_probs=271.3
Q ss_pred EEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCCCC
Q 017793 17 AAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVK 95 (366)
Q Consensus 17 ~~~~~~~-~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~ 95 (366)
++.+.++ +.+++++.|.|.|+++|++||+.++++|++|++...|.. ....+|.++|||++|+|+++|++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~--------~~~~~p~~~g~e~~G~V~~vG~~v~ 73 (337)
T cd05283 2 GYAARDASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEW--------GPTKYPLVPGHEIVGIVVAVGSKVT 73 (337)
T ss_pred ceEEecCCCCceEEeccCCCCCCCeEEEEEEEecccchHHHHhcCCc--------CCCCCCcccCcceeeEEEEECCCCc
Confidence 4455555 689999999999999999999999999999999887432 1234588999999999999999999
Q ss_pred CCCCCCEEEEc-CCcCCCCCccccCCCCCCCCCccccC------CCCCCCcceEEEEecCCceEECCCCCCccccccch-
Q 017793 96 SLEVGDRVALE-PGISCGHCSLCKAGSYNLCPEMRFFG------SPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE- 167 (366)
Q Consensus 96 ~~~~Gd~V~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~- 167 (366)
+|++||+|++. ....|++|.+|..++.++|+++.+.. +....|+|+||+.++.+.++++|+++++++++.+.
T Consensus 74 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~ 153 (337)
T cd05283 74 KFKVGDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLC 153 (337)
T ss_pred ccCCCCEEEEecCCCCCCCCccccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhheEECCCCCCHHHhhhhhh
Confidence 99999999854 44589999999999999999876652 12357999999999999999999999999988765
Q ss_pred hhHHHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHH
Q 017793 168 PLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVG 247 (366)
Q Consensus 168 ~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~ 247 (366)
.+.+||++++...++++++++|.|+|++|++++++|+..|+ .++++++++++.++++++|++.+++... .++. +
T Consensus 154 ~~~ta~~~~~~~~~~~g~~vlV~g~g~vG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~vi~~~~--~~~~---~ 227 (337)
T cd05283 154 AGITVYSPLKRNGVGPGKRVGVVGIGGLGHLAVKFAKALGA-EVTAFSRSPSKKEDALKLGADEFIATKD--PEAM---K 227 (337)
T ss_pred HHHHHHHHHHhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEecCcc--hhhh---h
Confidence 67889999877778999999999899999999999999999 7888888889999999999988776432 2221 1
Q ss_pred HHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeecc-CCChHHHHHHHHC
Q 017793 248 KIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRS 326 (366)
Q Consensus 248 ~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~ 326 (366)
. .++++|++|||+|+......++++|+++|+++.+|.......++...++.++.++.++... .+.++.+++++++
T Consensus 228 ~----~~~~~d~v~~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 303 (337)
T cd05283 228 K----AAGSLDLIIDTVSASHDLDPYLSLLKPGGTLVLVGAPEEPLPVPPFPLIFGRKSVAGSLIGGRKETQEMLDFAAE 303 (337)
T ss_pred h----ccCCceEEEECCCCcchHHHHHHHhcCCCEEEEEeccCCCCccCHHHHhcCceEEEEecccCHHHHHHHHHHHHh
Confidence 1 2568999999999875688899999999999999866544344445556788888887655 5678889999999
Q ss_pred CCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEee
Q 017793 327 GKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 365 (366)
Q Consensus 327 g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~ 365 (366)
+++ ++.+ +.|++ +++++|++.+++++..||+|++
T Consensus 304 ~~l--~~~~-~~~~~--~~~~~a~~~~~~~~~~~k~v~~ 337 (337)
T cd05283 304 HGI--KPWV-EVIPM--DGINEALERLEKGDVRYRFVLD 337 (337)
T ss_pred CCC--ccce-EEEEH--HHHHHHHHHHHcCCCcceEeeC
Confidence 998 4444 67888 9999999999999999999874
No 62
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=100.00 E-value=2.1e-40 Score=304.42 Aligned_cols=305 Identities=19% Similarity=0.237 Sum_probs=245.7
Q ss_pred ceEEEEeeCC------ceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEE
Q 017793 15 NMAAWLLGIK------TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIE 88 (366)
Q Consensus 15 ~~~~~~~~~~------~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~ 88 (366)
||++++.+++ .++++++|.|.|+++||+||+.++|+|++|++...|.+. ....+|.++|||++|+|+
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~-------~~~~~p~v~G~e~~G~V~ 73 (324)
T cd08291 1 MKALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYG-------STKALPVPPGFEGSGTVV 73 (324)
T ss_pred CeEEEEeecCCCccccEEEecccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCC-------CCCCCCcCCCcceEEEEE
Confidence 5788887653 578889999999999999999999999999998874321 113468899999999999
Q ss_pred EeCCCCCC-CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch
Q 017793 89 EVGSEVKS-LEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE 167 (366)
Q Consensus 89 ~vG~~v~~-~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~ 167 (366)
++|+++++ |++||+|++.+ ..+|+|+||+.++++.++++|+++++++++.++
T Consensus 74 ~vG~~v~~~~~vGd~V~~~~---------------------------~~~g~~a~~~~v~~~~~~~iP~~~~~~~aa~~~ 126 (324)
T cd08291 74 AAGGGPLAQSLIGKRVAFLA---------------------------GSYGTYAEYAVADAQQCLPLPDGVSFEQGASSF 126 (324)
T ss_pred EECCCccccCCCCCEEEecC---------------------------CCCCcchheeeecHHHeEECCCCCCHHHHhhhc
Confidence 99999996 99999998631 014999999999999999999999999988654
Q ss_pred -hhHHHHHHHHhCCCCCCCEEEEE--CCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHH
Q 017793 168 -PLSVGVHACRRANVGPETNVMIM--GSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDT 244 (366)
Q Consensus 168 -~~~~a~~~l~~~~~~~~~~vlI~--G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~ 244 (366)
...+||..++..+. ++++++|+ |+|++|++++|+|+.+|+ .++++++++++.++++++|++.++++.. +++.+
T Consensus 127 ~~~~ta~~~~~~~~~-~~~~vlv~~~g~g~vG~~a~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~--~~~~~ 202 (324)
T cd08291 127 VNPLTALGMLETARE-EGAKAVVHTAAASALGRMLVRLCKADGI-KVINIVRRKEQVDLLKKIGAEYVLNSSD--PDFLE 202 (324)
T ss_pred ccHHHHHHHHHhhcc-CCCcEEEEccCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEECCC--ccHHH
Confidence 56677755555554 56667775 479999999999999999 6888889999999999999999887543 56666
Q ss_pred HHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCc--eeechHhhhcCcEEEEeecc-------CC
Q 017793 245 DVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEM--TVALTPAAAREVDVIGIFRY-------RS 315 (366)
Q Consensus 245 ~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~-------~~ 315 (366)
.+.++. .+.++|++||++|+. .....+++++++|+++.+|...... .++....+.+++++.+++.. .+
T Consensus 203 ~v~~~~--~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (324)
T cd08291 203 DLKELI--AKLNATIFFDAVGGG-LTGQILLAMPYGSTLYVYGYLSGKLDEPIDPVDLIFKNKSIEGFWLTTWLQKLGPE 279 (324)
T ss_pred HHHHHh--CCCCCcEEEECCCcH-HHHHHHHhhCCCCEEEEEEecCCCCcccCCHHHHhhcCcEEEEEEHHHhhcccCHH
Confidence 665554 256899999999976 5677899999999999998654321 23344567788888887643 23
Q ss_pred ChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEee
Q 017793 316 TWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 365 (366)
Q Consensus 316 ~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~ 365 (366)
.+++++++++ +.+ ++.++++|+| +++++|++.+.++...||+++.
T Consensus 280 ~~~~~~~~~~-~~~--~~~i~~~~~l--~~~~~a~~~~~~~~~~Gkvv~~ 324 (324)
T cd08291 280 VVKKLKKLVK-TEL--KTTFASRYPL--ALTLEAIAFYSKNMSTGKKLLI 324 (324)
T ss_pred HHHHHHHHHh-Ccc--ccceeeEEcH--HHHHHHHHHHHhCCCCCeEEeC
Confidence 5777888887 776 7788899999 9999999999999999999873
No 63
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=100.00 E-value=4.2e-40 Score=310.28 Aligned_cols=348 Identities=21% Similarity=0.216 Sum_probs=276.5
Q ss_pred CcccceEEEEee-----C-CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhccccccc--ccCccCCCC-ccccc
Q 017793 11 DKNQNMAAWLLG-----I-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMR--CANFIVKKP-MVIGH 81 (366)
Q Consensus 11 ~~~~~~~~~~~~-----~-~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~--~~~~~~~~p-~i~G~ 81 (366)
+|++||+.++.. | +.+++.++|.|.|+++|++||+.++++|++|++...+.+..... .+......| .++||
T Consensus 4 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G~ 83 (398)
T TIGR01751 4 VPETMYAFAIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIGS 83 (398)
T ss_pred cchhhhheEEecccCCCcccceEEeecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceeccc
Confidence 567788888843 2 45899999999999999999999999999998776543211100 000111223 37999
Q ss_pred ceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCcc
Q 017793 82 ECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLE 161 (366)
Q Consensus 82 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~ 161 (366)
|++|+|+++|++++.|++||+|++.+...|++|.+|+.+++++|+.+.+++.....|+|+||++++.+.++++|++++++
T Consensus 84 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~ae~~~v~~~~~~~vP~~l~~~ 163 (398)
T TIGR01751 84 DASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRIWGYETNFGSFAEFALVKDYQLMPKPKHLTWE 163 (398)
T ss_pred ceEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCccccccccccccccCCCccceEEEEechHHeEECCCCCCHH
Confidence 99999999999999999999999999999999999999999999987666655568999999999999999999999999
Q ss_pred ccccch-hhHHHHHHHH---hCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecC
Q 017793 162 EGAMCE-PLSVGVHACR---RANVGPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVS 236 (366)
Q Consensus 162 ~aa~~~-~~~~a~~~l~---~~~~~~~~~vlI~G~-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~ 236 (366)
+++.+. .+.+||.++. ..++++++++||+|+ |++|++++|+|+.+|+ .++++++++++.++++++|++.++++.
T Consensus 164 ~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~-~vi~~~~~~~~~~~~~~~g~~~~v~~~ 242 (398)
T TIGR01751 164 EAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGG-NPVAVVSSPEKAEYCRELGAEAVIDRN 242 (398)
T ss_pred HHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCCEEecCC
Confidence 888765 7888998874 367899999999995 9999999999999999 566677888899999999999888754
Q ss_pred CCC--------------------cchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCC-cee
Q 017793 237 TDI--------------------EDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE-MTV 295 (366)
Q Consensus 237 ~~~--------------------~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~ 295 (366)
... ..+...+.++ +.++++|++|||+|. ..+..++++++++|+++.+|..... ..+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~g~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~ 319 (398)
T TIGR01751 243 DFGHWGRLPDLNTQAPKEWTKSFKRFGKRIREL--TGGEDPDIVFEHPGR-ATFPTSVFVCRRGGMVVICGGTTGYNHDY 319 (398)
T ss_pred CcchhhccccccccccchhhhcchhHHHHHHHH--cCCCCceEEEECCcH-HHHHHHHHhhccCCEEEEEccccCCCCCc
Confidence 310 1122223222 235679999999996 5788899999999999999865432 334
Q ss_pred echHhhhcCcEEEEeecc-CCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793 296 ALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 366 (366)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~ 366 (366)
+...+..++.++.+.... .+.+++++++++++.+ .+.+++++++ ++++++++.+.++...||+|+++
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l--~~~~~~~~~l--~~~~~a~~~~~~~~~~gkvvv~~ 387 (398)
T TIGR01751 320 DNRYLWMRQKRIQGSHFANLREAWEANRLVAKGRI--DPTLSKVYPL--EEIGQAHQDVHRNHHQGNVAVLV 387 (398)
T ss_pred CHHHHhhcccEEEccccCcHHHHHHHHHHHHCCCc--ccceeeEEcH--HHHHHHHHHHHcCCCCceEEEEe
Confidence 444555667777766543 3457889999999998 4557788888 99999999999999999999864
No 64
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=1.7e-39 Score=299.72 Aligned_cols=331 Identities=37% Similarity=0.661 Sum_probs=277.0
Q ss_pred ceEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCCC
Q 017793 15 NMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEV 94 (366)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v 94 (366)
|+++++.+++.+++.+.|.|+++++||+||++++++|+.|+....| .....+|.++|+|++|+|+++|+++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g---------~~~~~~p~~~g~~~~G~v~~vG~~v 71 (334)
T cd08234 1 MKALVYEGPGELEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEG---------EFGAAPPLVPGHEFAGVVVAVGSKV 71 (334)
T ss_pred CeeEEecCCCceEEEeccCCCCCCCeEEEEEEEEeEchhhhHHhcC---------CCCCCCCcccccceEEEEEEeCCCC
Confidence 5788888888899999999999999999999999999999988773 2233467899999999999999999
Q ss_pred CCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccchhhHHHHH
Q 017793 95 KSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVH 174 (366)
Q Consensus 95 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~~~~~a~~ 174 (366)
+.|++||+|++.+...|+.|.+|..+.+++|+.+.+.+. ...|+|++|+.++.+.++++|+++++.+|+.+..+.++++
T Consensus 72 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~~~~~~a~~ 150 (334)
T cd08234 72 TGFKVGDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGV-TRNGGFAEYVVVPAKQVYKIPDNLSFEEAALAEPLSCAVH 150 (334)
T ss_pred CCCCCCCEEEEcCCcCCCCCccccCcChhhCCCcceecc-CCCCcceeEEEecHHHcEECcCCCCHHHHhhhhHHHHHHH
Confidence 999999999999999999999999999999988765432 2579999999999999999999999999887667778888
Q ss_pred HHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhC
Q 017793 175 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMG 254 (366)
Q Consensus 175 ~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (366)
+++..++++++++||+|+|.+|++++++|+..|+.+++++++++++.++++++|++.++++.. .++... + . ..+
T Consensus 151 ~l~~~~~~~g~~vlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~-~-~--~~~ 224 (334)
T cd08234 151 GLDLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSR--EDPEAQ-K-E--DNP 224 (334)
T ss_pred HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCCC--CCHHHH-H-H--hcC
Confidence 887788999999999999999999999999999965888888999999999999887766533 333333 2 2 235
Q ss_pred CCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCC--ceeechHhhhcCcEEEEeeccCCChHHHHHHHHCCCCCCC
Q 017793 255 SGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE--MTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVK 332 (366)
Q Consensus 255 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~ 332 (366)
.++|+++||++........+++|+++|+++.+|..... .......+..++..+.+.......+++++++++++.+.+.
T Consensus 225 ~~vd~v~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 304 (334)
T cd08234 225 YGFDVVIEATGVPKTLEQAIEYARRGGTVLVFGVYAPDARVSISPFEIFQKELTIIGSFINPYTFPRAIALLESGKIDVK 304 (334)
T ss_pred CCCcEEEECCCChHHHHHHHHHHhcCCEEEEEecCCCCCCcccCHHHHHhCCcEEEEeccCHHHHHHHHHHHHcCCCChh
Confidence 78999999998777888999999999999999865432 2222333445677887776666778999999999998655
Q ss_pred CceEEEecCChhhHHHHHHHHHcCCCceEEEe
Q 017793 333 PLITHRFGFTQKEIEDAFEISAQGGNAIKVMF 364 (366)
Q Consensus 333 ~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi 364 (366)
+.+..++++ ++++++++.+.+ ...||+++
T Consensus 305 ~~~~~~~~~--~~~~~a~~~~~~-~~~~k~vi 333 (334)
T cd08234 305 GLVSHRLPL--EEVPEALEGMRS-GGALKVVV 333 (334)
T ss_pred hhEEEEecH--HHHHHHHHHHhc-CCceEEEe
Confidence 556778888 999999999998 78899986
No 65
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=1.6e-39 Score=300.59 Aligned_cols=336 Identities=33% Similarity=0.583 Sum_probs=273.2
Q ss_pred ceEEEEeeCC-ceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCC
Q 017793 15 NMAAWLLGIK-TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE 93 (366)
Q Consensus 15 ~~~~~~~~~~-~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~ 93 (366)
||++++++++ .+.+.+.|.|.|+++|++||+.++++|+.|+..+.+... .......|.++|+|++|+|+++|++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~-----~~~~~~~~~~~g~e~~G~V~~~G~~ 75 (341)
T cd05281 1 MKAIVKTKAGPGAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEW-----AQSRIKPPLIFGHEFAGEVVEVGEG 75 (341)
T ss_pred CcceEEecCCCceEEEeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCC-----ccccCCCCcccccceEEEEEEECCC
Confidence 5777887664 699999999999999999999999999999987552100 0011235678999999999999999
Q ss_pred CCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccchhhHHHH
Q 017793 94 VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGV 173 (366)
Q Consensus 94 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~~~~~a~ 173 (366)
++.|++||+|++.+..+|+.|.+|..+.+++|+..++.+. ...|+|++|++++.+.++++|++++++.++...++.+++
T Consensus 76 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~v~v~~~~~~~lP~~~~~~~a~~~~~~~~a~ 154 (341)
T cd05281 76 VTRVKVGDYVSAETHIVCGKCYQCRTGNYHVCQNTKILGV-DTDGCFAEYVVVPEENLWKNDKDIPPEIASIQEPLGNAV 154 (341)
T ss_pred CCCCCCCCEEEECCccCCCCChHHHCcCcccCcccceEec-cCCCcceEEEEechHHcEECcCCCCHHHhhhhhHHHHHH
Confidence 9999999999999888999999999999999988766553 457999999999999999999999987776666788888
Q ss_pred HHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhh
Q 017793 174 HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM 253 (366)
Q Consensus 174 ~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (366)
+++. ...+++++|||+|+|++|++++|+|+..|++.++++++++++.++++++|++.++++. ..++. .+.++. .
T Consensus 155 ~~~~-~~~~~g~~vlV~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~-~~~~~~--~ 228 (341)
T cd05281 155 HTVL-AGDVSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINPR--EEDVV-EVKSVT--D 228 (341)
T ss_pred HHHH-hcCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCcc--cccHH-HHHHHc--C
Confidence 8765 4457899999998999999999999999986678888889999999999998776643 24555 554443 3
Q ss_pred CCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeech-HhhhcCcEEEEeecc--CCChHHHHHHHHCCCCC
Q 017793 254 GSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALT-PAAAREVDVIGIFRY--RSTWPLCIEFLRSGKID 330 (366)
Q Consensus 254 ~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~l~~g~~~ 330 (366)
++++|++|||+|+......++++|+++|+++.+|........... ....+++++.+.... .+.++++++++.++.+.
T Consensus 229 ~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~ 308 (341)
T cd05281 229 GTGVDVVLEMSGNPKAIEQGLKALTPGGRVSILGLPPGPVDIDLNNLVIFKGLTVQGITGRKMFETWYQVSALLKSGKVD 308 (341)
T ss_pred CCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCCCcccccchhhhccceEEEEEecCCcchhHHHHHHHHHcCCCC
Confidence 568999999999877889999999999999999865432222222 356677777766532 45678899999999986
Q ss_pred CCCceEEEecCChhhHHHHHHHHHcCCCceEEEee
Q 017793 331 VKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 365 (366)
Q Consensus 331 ~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~ 365 (366)
+.+.+...+++ ++++++++.+.++. .||+|++
T Consensus 309 ~~~~~~~~~~~--~~~~~a~~~~~~~~-~gk~vv~ 340 (341)
T cd05281 309 LSPVITHKLPL--EDFEEAFELMRSGK-CGKVVLY 340 (341)
T ss_pred hhHheEEEecH--HHHHHHHHHHhcCC-CceEEec
Confidence 65667778888 99999999999998 9999986
No 66
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=100.00 E-value=3.1e-39 Score=299.23 Aligned_cols=335 Identities=31% Similarity=0.504 Sum_probs=277.0
Q ss_pred ceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCC
Q 017793 15 NMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE 93 (366)
Q Consensus 15 ~~~~~~~~~-~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~ 93 (366)
||++++..+ .++++++.|.|.+.+++|+||+.++++|+.|+....|.. ....+|.++|+|++|+|+++|++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~--------~~~~~~~~~g~e~~G~V~~~G~~ 72 (345)
T cd08260 1 MRAAVYEEFGEPLEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHD--------PDVTLPHVPGHEFAGVVVEVGED 72 (345)
T ss_pred CeeEEEecCCCCcEEEEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCC--------CCCCCCeeeccceeEEEEEECCC
Confidence 577777765 468999999999999999999999999999998877421 11345789999999999999999
Q ss_pred CCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCC--ceEECCCCCCccccccch-hhH
Q 017793 94 VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAK--LCYKLPDNVSLEEGAMCE-PLS 170 (366)
Q Consensus 94 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~--~~~~~P~~~~~~~aa~~~-~~~ 170 (366)
++.|++||+|++.+...|++|.+|..|..++|+.....+. ...|+|++|+.++.. .++++|++++.++++.+. .+.
T Consensus 73 ~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~~~iP~~~~~~~aa~l~~~~~ 151 (345)
T cd08260 73 VSRWRVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQPGF-THPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFA 151 (345)
T ss_pred CccCCCCCEEEECCCCCCCCCccccCcCcccCCCCccccc-CCCCcceeEEEcccccCceEECCCCCCHHHhhhhccchH
Confidence 9999999999987777899999999999999998643332 247999999999975 999999999999888775 788
Q ss_pred HHHHHH-HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHH
Q 017793 171 VGVHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKI 249 (366)
Q Consensus 171 ~a~~~l-~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~ 249 (366)
+||+++ +..+++++++++|+|+|++|++++|+|+..|+ .++++.+++++.+.++++|++.++++.. ..++...+..+
T Consensus 152 ta~~~l~~~~~~~~~~~vlV~g~g~vg~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~-~~~~~~~~~~~ 229 (345)
T cd08260 152 TAFRALVHQARVKPGEWVAVHGCGGVGLSAVMIASALGA-RVIAVDIDDDKLELARELGAVATVNASE-VEDVAAAVRDL 229 (345)
T ss_pred HHHHHHHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHhCCCEEEcccc-chhHHHHHHHH
Confidence 999998 45788999999999999999999999999999 6788888899999999999988877543 14555555544
Q ss_pred HHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCC---ceeechHhhhcCcEEEEeecc-CCChHHHHHHHH
Q 017793 250 QNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE---MTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLR 325 (366)
Q Consensus 250 ~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~---~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~ 325 (366)
. ++++|++|||+|+......++++++++|+++.+|..... ..++...+..+++++.+.... ...+++++++++
T Consensus 230 ~---~~~~d~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 306 (345)
T cd08260 230 T---GGGAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHGMPAHRYDAMLALIA 306 (345)
T ss_pred h---CCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCcCCHHHHHHHHHHHH
Confidence 3 338999999999766888999999999999999865432 233344455777888876544 567889999999
Q ss_pred CCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEee
Q 017793 326 SGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 365 (366)
Q Consensus 326 ~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~ 365 (366)
++++.+.+.+.+.+++ ++++++++.+.++...||+|++
T Consensus 307 ~~~i~~~~~~~~~~~~--~~~~~a~~~~~~~~~~~~~v~~ 344 (345)
T cd08260 307 SGKLDPEPLVGRTISL--DEAPDALAAMDDYATAGITVIT 344 (345)
T ss_pred cCCCChhhheeEEecH--HHHHHHHHHHHcCCCCceEEec
Confidence 9998655556788888 9999999999999999999875
No 67
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=100.00 E-value=1.3e-39 Score=301.17 Aligned_cols=309 Identities=18% Similarity=0.196 Sum_probs=242.9
Q ss_pred cCCcccceEEEEe-------eCCceEEEE---ecCCC-CCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCc
Q 017793 9 EGDKNQNMAAWLL-------GIKTLKIQP---YHLPT-LGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPM 77 (366)
Q Consensus 9 ~~~~~~~~~~~~~-------~~~~~~~~~---~~~p~-~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~ 77 (366)
+....++|+.++. .++.+++++ .|.|. +++|||||||.|+++||.|...+.+. ......|+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~--------~~~~~~p~ 74 (348)
T PLN03154 3 EGQVVENKQVILKNYIDGIPKETDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDF--------HDSYLPPF 74 (348)
T ss_pred CCccccceEEEEecCCCCCCCcccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhcc--------CCCCCCCc
Confidence 3444556777665 225688877 46663 58999999999999999987643311 11123588
Q ss_pred cccc--ceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCc--eEE
Q 017793 78 VIGH--ECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKL--CYK 153 (366)
Q Consensus 78 i~G~--e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~--~~~ 153 (366)
++|+ |++|+|..+|+++++|++||+|+. .|+|+||+.++.+. +.+
T Consensus 75 ~~G~~~~~~G~v~~vg~~v~~~~~Gd~V~~-------------------------------~~~~aey~~v~~~~~~~~~ 123 (348)
T PLN03154 75 VPGQRIEGFGVSKVVDSDDPNFKPGDLISG-------------------------------ITGWEEYSLIRSSDNQLRK 123 (348)
T ss_pred CCCCeeEeeEEEEEEecCCCCCCCCCEEEe-------------------------------cCCcEEEEEEeccccceEE
Confidence 9997 889999999999999999999973 36899999998753 544
Q ss_pred --CCCCCCcc-ccccch-hhHHHHHHHH-hCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-H
Q 017793 154 --LPDNVSLE-EGAMCE-PLSVGVHACR-RANVGPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-N 226 (366)
Q Consensus 154 --~P~~~~~~-~aa~~~-~~~~a~~~l~-~~~~~~~~~vlI~G~-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~ 226 (366)
+|++++++ +|+.++ ++.|||+++. ..++++|++|||+|+ |++|++++|+||..|+ +|+++++++++.++++ +
T Consensus 124 ~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~-~Vi~~~~~~~k~~~~~~~ 202 (348)
T PLN03154 124 IQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNK 202 (348)
T ss_pred ccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHh
Confidence 58999986 565554 8889999984 578999999999995 9999999999999999 6888888999999987 7
Q ss_pred cCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCc------eeechHh
Q 017793 227 LGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEM------TVALTPA 300 (366)
Q Consensus 227 lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~------~~~~~~~ 300 (366)
+|++.++++.. ..++.+.++++. ++++|++||++|+. .+..++++++++|+++.+|...... ..+...+
T Consensus 203 lGa~~vi~~~~-~~~~~~~i~~~~---~~gvD~v~d~vG~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~ 277 (348)
T PLN03154 203 LGFDEAFNYKE-EPDLDAALKRYF---PEGIDIYFDNVGGD-MLDAALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNL 277 (348)
T ss_pred cCCCEEEECCC-cccHHHHHHHHC---CCCcEEEEECCCHH-HHHHHHHHhccCCEEEEECccccCCCCCCCCcccHHHH
Confidence 99999988643 235555555442 46899999999964 8899999999999999998654221 1233456
Q ss_pred hhcCcEEEEeecc------CCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793 301 AAREVDVIGIFRY------RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 366 (366)
Q Consensus 301 ~~~~~~~~~~~~~------~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~ 366 (366)
+.+++++.+++.. .+.++++++++++|++ ++.+..+|+| +++++|++.+.+++..||+|+++
T Consensus 278 ~~k~~~i~g~~~~~~~~~~~~~~~~~~~l~~~G~l--~~~~~~~~~L--~~~~~A~~~l~~g~~~GKvVl~~ 345 (348)
T PLN03154 278 ISKRIRMQGFLQSDYLHLFPQFLENVSRYYKQGKI--VYIEDMSEGL--ESAPAALVGLFSGKNVGKQVIRV 345 (348)
T ss_pred hhccceEEEEEHHHHHHHHHHHHHHHHHHHHCCCc--cCceecccCH--HHHHHHHHHHHcCCCCceEEEEe
Confidence 7788888887643 2457789999999999 5556677889 99999999999999999999874
No 68
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=100.00 E-value=1.6e-39 Score=299.93 Aligned_cols=326 Identities=27% Similarity=0.423 Sum_probs=270.0
Q ss_pred ceEEEEeeCC-ceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCC
Q 017793 15 NMAAWLLGIK-TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE 93 (366)
Q Consensus 15 ~~~~~~~~~~-~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~ 93 (366)
|+++++.+++ ++++++.|.|.++++|++|++.++++|++|+....|.. ....+|.++|+|++|+|+++|++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~--------~~~~~~~~~g~e~~G~v~~~g~~ 72 (334)
T PRK13771 1 MKAVILPGFKQGYRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFY--------PRMKYPVILGHEVVGTVEEVGEN 72 (334)
T ss_pred CeeEEEcCCCCCcEEEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCC--------CCCCCCeeccccceEEEEEeCCC
Confidence 5788888886 49999999999999999999999999999998776321 11345788999999999999999
Q ss_pred CCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhHHH
Q 017793 94 VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVG 172 (366)
Q Consensus 94 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~~a 172 (366)
++.+++||+|++.+..+|+.|.+|..+..++|+...+++. ...|+|++|+.++.+.++++|+++++.+++.+. .+.+|
T Consensus 73 ~~~~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~~~~a 151 (334)
T PRK13771 73 VKGFKPGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGE-ELDGFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMV 151 (334)
T ss_pred CccCCCCCEEEECCCCCCcCChhhcCCCcccCcccccccc-ccCceeeeeeecchhceEECCCCCCHHHhhcccchHHHH
Confidence 9889999999999888999999999999999999776653 457999999999999999999999999888775 77889
Q ss_pred HHHHHhCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHH
Q 017793 173 VHACRRANVGPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN 251 (366)
Q Consensus 173 ~~~l~~~~~~~~~~vlI~G~-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~ 251 (366)
|+++...++++++++||+|+ |++|++++|+|+..|+ +++++++++++.+.++++ ++.++++. ++...+..+
T Consensus 152 ~~~~~~~~~~~~~~vlI~g~~g~~g~~~~~la~~~g~-~vi~~~~~~~~~~~~~~~-~~~~~~~~----~~~~~v~~~-- 223 (334)
T PRK13771 152 YRGLRRAGVKKGETVLVTGAGGGVGIHAIQVAKALGA-KVIAVTSSESKAKIVSKY-ADYVIVGS----KFSEEVKKI-- 223 (334)
T ss_pred HHHHHhcCCCCCCEEEEECCCccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHH-HHHhcCch----hHHHHHHhc--
Confidence 99886668899999999995 9999999999999999 678888888999988888 66554432 333333321
Q ss_pred hhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCce--eechHhhhcCcEEEEeecc-CCChHHHHHHHHCCC
Q 017793 252 AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMT--VALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGK 328 (366)
Q Consensus 252 ~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~ 328 (366)
.++|+++||+|+. ....++++|+++|+++.+|....... ........++.++.+.... .+.+++++++++++.
T Consensus 224 ---~~~d~~ld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (334)
T PRK13771 224 ---GGADIVIETVGTP-TLEESLRSLNMGGKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHISATKRDVEEALKLVAEGK 299 (334)
T ss_pred ---CCCcEEEEcCChH-HHHHHHHHHhcCCEEEEEeccCCCCCcccCHHHHHhcccEEEEecCCCHHHHHHHHHHHHcCC
Confidence 2699999999975 68899999999999999986543222 3333345667777776443 567889999999999
Q ss_pred CCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEee
Q 017793 329 IDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 365 (366)
Q Consensus 329 ~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~ 365 (366)
+ .+.+.+.|++ +++++|++.+.++...||+++.
T Consensus 300 l--~~~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~~ 332 (334)
T PRK13771 300 I--KPVIGAEVSL--SEIDKALEELKDKSRIGKILVK 332 (334)
T ss_pred C--cceEeeeEcH--HHHHHHHHHHHcCCCcceEEEe
Confidence 8 4557788889 9999999999998889999986
No 69
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=100.00 E-value=4.1e-39 Score=297.78 Aligned_cols=329 Identities=34% Similarity=0.631 Sum_probs=268.7
Q ss_pred CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCCCCCCCCCCEE
Q 017793 24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRV 103 (366)
Q Consensus 24 ~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V 103 (366)
..+++++.|.|.|+++|++||+.++++|+.|+..+.+.... .....+|.++|+|++|+|+++|+++++|++||+|
T Consensus 9 ~~~~l~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~-----~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V 83 (340)
T TIGR00692 9 YGAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWA-----QSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYV 83 (340)
T ss_pred CCcEEEECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCC-----CCCCCCCcccccceEEEEEEECCCCCcCCCCCEE
Confidence 57889999999999999999999999999999876532110 0112357789999999999999999999999999
Q ss_pred EEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccchhhHHHHHHHHhCCCCC
Q 017793 104 ALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGP 183 (366)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~~~~~a~~~l~~~~~~~ 183 (366)
+..+...|+.|..|..++.++|++..+++. ...|+|++|++++++.++++|++++++.|+...++.+|++++ ....++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~a~~~~-~~~~~~ 161 (340)
T TIGR00692 84 SVETHIVCGKCYACRRGQYHVCQNTKIFGV-DTDGCFAEYAVVPAQNIWKNPKSIPPEYATIQEPLGNAVHTV-LAGPIS 161 (340)
T ss_pred EECCcCCCCCChhhhCcChhhCcCcceEee-cCCCcceeEEEeehHHcEECcCCCChHhhhhcchHHHHHHHH-HccCCC
Confidence 999999999999999999999999876642 357999999999999999999999987776656788888776 345678
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEc
Q 017793 184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDC 263 (366)
Q Consensus 184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~ 263 (366)
+++++|.|+|++|++++|+|+.+|++.|+++++++++.++++++|++.++++.. .++.+.+.++. .++++|++|||
T Consensus 162 g~~vlI~~~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~--~~~~~~l~~~~--~~~~~d~vld~ 237 (340)
T TIGR00692 162 GKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFK--EDVVKEVADLT--DGEGVDVFLEM 237 (340)
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEcccc--cCHHHHHHHhc--CCCCCCEEEEC
Confidence 999999889999999999999999965888888889999999999987776533 45666665543 35689999999
Q ss_pred CCChHHHHHHHHhhcCCceEEEEcccCCCceeech-HhhhcCcEEEEeecc--CCChHHHHHHHHCCCCCCCCceEEEec
Q 017793 264 VGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALT-PAAAREVDVIGIFRY--RSTWPLCIEFLRSGKIDVKPLITHRFG 340 (366)
Q Consensus 264 ~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~l~~g~~~~~~~~~~~~~ 340 (366)
+|+...+...+++|+++|+++.+|........+.. .+.++.+++.+.... .+.+++++++++++.+.+.+.+.+.++
T Consensus 238 ~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~ 317 (340)
T TIGR00692 238 SGAPKALEQGLQAVTPGGRVSLLGLPPGKVTIDFTNKVIFKGLTIYGITGRHMFETWYTVSRLIQSGKLDLDPIITHKFK 317 (340)
T ss_pred CCCHHHHHHHHHhhcCCCEEEEEccCCCCcccchhhhhhhcceEEEEEecCCchhhHHHHHHHHHcCCCChHHheeeeee
Confidence 99877889999999999999999865332233333 456677777765532 345788999999999965455778888
Q ss_pred CChhhHHHHHHHHHcCCCceEEEeeC
Q 017793 341 FTQKEIEDAFEISAQGGNAIKVMFNL 366 (366)
Q Consensus 341 l~~~~~~~a~~~~~~~~~~gkvvi~~ 366 (366)
+ +++.++++.+.++.. ||+|+++
T Consensus 318 l--~~~~~a~~~~~~~~~-gkvvv~~ 340 (340)
T TIGR00692 318 F--DKFEKGFELMRSGQT-GKVILSL 340 (340)
T ss_pred H--HHHHHHHHHHhcCCC-ceEEEeC
Confidence 8 999999999998864 9999875
No 70
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=9.8e-39 Score=295.45 Aligned_cols=334 Identities=28% Similarity=0.455 Sum_probs=277.1
Q ss_pred ceEEEEeeCC--ceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCC
Q 017793 15 NMAAWLLGIK--TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGS 92 (366)
Q Consensus 15 ~~~~~~~~~~--~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~ 92 (366)
||++++.+++ .+++++.|.|.+.++|++||+.++++|++|+.+..|... ...+.|.++|+|++|+|+++|+
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~-------~~~~~~~~~g~e~~G~V~~vG~ 73 (341)
T cd08297 1 MKAAVVEEFGEKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWP-------VKPKLPLIGGHEGAGVVVAVGP 73 (341)
T ss_pred CceEEeeccCCCCceEEEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCC-------cCCCCCccCCcccceEEEEeCC
Confidence 6788888665 899999999999999999999999999999988773221 1124467899999999999999
Q ss_pred CCCCCCCCCEEEEcC-CcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhH
Q 017793 93 EVKSLEVGDRVALEP-GISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLS 170 (366)
Q Consensus 93 ~v~~~~~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~ 170 (366)
+++.|++||+|++.+ ...|+.|.+|..++..+|+...+.+. ...|++++|+.++.+.++++|+++++++++.+. .+.
T Consensus 74 ~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~s~~~~~~~~~~~lp~~~~~~~~a~l~~~~~ 152 (341)
T cd08297 74 GVSGLKVGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNSGY-TVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGV 152 (341)
T ss_pred CCCCCCCCCEEEEecCCCCCCCCccccCCCcccCCCcccccc-ccCCcceeEEEeccccEEECCCCCCHHHHHHHHcchH
Confidence 999999999999876 46799999999999999998766654 357999999999999999999999999988765 788
Q ss_pred HHHHHHHhCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHH
Q 017793 171 VGVHACRRANVGPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKI 249 (366)
Q Consensus 171 ~a~~~l~~~~~~~~~~vlI~G~-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~ 249 (366)
+||+++...++++++++||+|+ +++|++++++|+.+|+ .++++.+++++.+.++++|++.++++.. .++...+.+.
T Consensus 153 ta~~~~~~~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~--~~~~~~~~~~ 229 (341)
T cd08297 153 TVYKALKKAGLKPGDWVVISGAGGGLGHLGVQYAKAMGL-RVIAIDVGDEKLELAKELGADAFVDFKK--SDDVEAVKEL 229 (341)
T ss_pred HHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCcEEEcCCC--ccHHHHHHHH
Confidence 8999987778999999999984 6799999999999999 6888888889999999999988877543 3565665544
Q ss_pred HHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCc-eeechHhhhcCcEEEEeecc-CCChHHHHHHHHCC
Q 017793 250 QNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEM-TVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSG 327 (366)
Q Consensus 250 ~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g 327 (366)
. .++++|++||+.++......++++++++|+++.+|...... .+....+..++.++.+.... .+.+++++++++++
T Consensus 230 ~--~~~~vd~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (341)
T cd08297 230 T--GGGGAHAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPGGFIPLDPFDLVLRGITIVGSLVGTRQDLQEALEFAARG 307 (341)
T ss_pred h--cCCCCCEEEEcCCchHHHHHHHHHhhcCCEEEEecCCCCCCCCCCHHHHHhcccEEEEeccCCHHHHHHHHHHHHcC
Confidence 3 35789999998887778999999999999999998654322 33334455778888775543 46788999999999
Q ss_pred CCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793 328 KIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 366 (366)
Q Consensus 328 ~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~ 366 (366)
.+. +.+ ..|++ ++++++++.+.++...||+++++
T Consensus 308 ~l~--~~~-~~~~~--~~~~~a~~~~~~~~~~gkvvi~~ 341 (341)
T cd08297 308 KVK--PHI-QVVPL--EDLNEVFEKMEEGKIAGRVVVDF 341 (341)
T ss_pred CCc--cee-EEEcH--HHHHHHHHHHHcCCccceEEEeC
Confidence 984 333 56888 99999999999999999999875
No 71
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=100.00 E-value=2.3e-38 Score=292.47 Aligned_cols=333 Identities=32% Similarity=0.552 Sum_probs=276.6
Q ss_pred ceEEEEeeCC-c-eEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCC
Q 017793 15 NMAAWLLGIK-T-LKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGS 92 (366)
Q Consensus 15 ~~~~~~~~~~-~-~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~ 92 (366)
||+.++..+. . +.+.+.|.|.+++++|+|++.++++|+.|+....|.+. .....|.++|+|++|+|+++|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~-------~~~~~~~~~g~~~~G~v~~~G~ 73 (338)
T cd08254 1 MKAWRFHKGSKGLLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVP-------TLTKLPLTLGHEIAGTVVEVGA 73 (338)
T ss_pred CeeEEEecCCCCceEEeccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCc-------ccCCCCEeccccccEEEEEECC
Confidence 6788888664 4 57788899999999999999999999999988774321 1234577899999999999999
Q ss_pred CCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhHH
Q 017793 93 EVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSV 171 (366)
Q Consensus 93 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~~ 171 (366)
+++.|++||+|++.+..+|+.|.+|..++..+|......+. ...|+|++|+.++.+.++++|+++++++++.+. .+.+
T Consensus 74 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~t 152 (338)
T cd08254 74 GVTNFKVGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGL-GIDGGFAEYIVVPARALVPVPDGVPFAQAAVATDAVLT 152 (338)
T ss_pred CCccCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCcccc-ccCCcceeeEEechHHeEECCCCCCHHHhhhhcchHHH
Confidence 99999999999999989999999999999999876554443 457999999999999999999999999988774 8889
Q ss_pred HHHHHH-hCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHH
Q 017793 172 GVHACR-RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQ 250 (366)
Q Consensus 172 a~~~l~-~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~ 250 (366)
||+++. ..+++++++|||.|+|++|++++++|+..|+ .++++++++++.+.++++|++.+++.. ...+...+ ..
T Consensus 153 a~~~l~~~~~~~~~~~vli~g~g~vG~~~~~la~~~G~-~V~~~~~s~~~~~~~~~~g~~~~~~~~--~~~~~~~~-~~- 227 (338)
T cd08254 153 PYHAVVRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGA-AVIAVDIKEEKLELAKELGADEVLNSL--DDSPKDKK-AA- 227 (338)
T ss_pred HHHHHHhccCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhCCCEEEcCC--CcCHHHHH-HH-
Confidence 999885 4679999999999889999999999999999 588888999999999999998776643 23444444 22
Q ss_pred HhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeecc-CCChHHHHHHHHCCCC
Q 017793 251 NAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKI 329 (366)
Q Consensus 251 ~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~ 329 (366)
..++++|+++||+|.......++++|+++|+++.+|.......+....+..++.++.+.+.. .+.+++++++++++.+
T Consensus 228 -~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~l 306 (338)
T cd08254 228 -GLGGGFDVIFDFVGTQPTFEDAQKAVKPGGRIVVVGLGRDKLTVDLSDLIARELRIIGSFGGTPEDLPEVLDLIAKGKL 306 (338)
T ss_pred -hcCCCceEEEECCCCHHHHHHHHHHhhcCCEEEEECCCCCCCccCHHHHhhCccEEEEeccCCHHHHHHHHHHHHcCCC
Confidence 23678999999998877899999999999999999865544444455567777788776544 5678899999999998
Q ss_pred CCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793 330 DVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 366 (366)
Q Consensus 330 ~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~ 366 (366)
.+. .+.+++ ++++++++.+.+++..||++++.
T Consensus 307 ~~~---~~~~~~--~~~~~a~~~~~~~~~~~kvv~~~ 338 (338)
T cd08254 307 DPQ---VETRPL--DEIPEVLERLHKGKVKGRVVLVP 338 (338)
T ss_pred ccc---ceeEcH--HHHHHHHHHHHcCCccceEEEeC
Confidence 543 467888 99999999999999999999863
No 72
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=100.00 E-value=1.6e-39 Score=292.00 Aligned_cols=260 Identities=24% Similarity=0.427 Sum_probs=220.5
Q ss_pred ccccceeEEEEEeCCCCC------CCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCC------CCCCcceEEEE
Q 017793 78 VIGHECAGIIEEVGSEVK------SLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSP------PTNGSLAHKVV 145 (366)
Q Consensus 78 i~G~e~~G~V~~vG~~v~------~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~g~~~e~~~ 145 (366)
++|||++|+|+++|++|+ +|++||||++.+..+|+.|.+|+.++++.|++..+++.. ..+|+|+||+.
T Consensus 1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~~~~~~~G~~aey~~ 80 (280)
T TIGR03366 1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKYGHEALDSGWPLSGGYAEHCH 80 (280)
T ss_pred CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhcCcccccCCccccccceeeEE
Confidence 579999999999999999 899999999999999999999999999999997766532 24699999999
Q ss_pred ecCC-ceEECCCCCCccccccch-hhHHHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHH
Q 017793 146 HPAK-LCYKLPDNVSLEEGAMCE-PLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSI 223 (366)
Q Consensus 146 ~~~~-~~~~~P~~~~~~~aa~~~-~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~ 223 (366)
++++ .++++|+++++++++.+. .+.++++++++....++++|||+|+|++|++++|+||.+|+++|++++.+++|.++
T Consensus 81 v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~G~G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~ 160 (280)
T TIGR03366 81 LPAGTAIVPVPDDLPDAVAAPAGCATATVMAALEAAGDLKGRRVLVVGAGMLGLTAAAAAAAAGAARVVAADPSPDRREL 160 (280)
T ss_pred ecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHHhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHH
Confidence 9997 799999999999988775 66888999987777799999999999999999999999999768888889999999
Q ss_pred HHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccC--CCceeechHhh
Q 017793 224 ARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK--TEMTVALTPAA 301 (366)
Q Consensus 224 ~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~--~~~~~~~~~~~ 301 (366)
++++|++.++++.. ..+.+.++. .+.++|++||++|.+..++.++++++++|+++.+|... ...+++...+.
T Consensus 161 a~~~Ga~~~i~~~~----~~~~~~~~~--~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~i~~~~~~ 234 (280)
T TIGR03366 161 ALSFGATALAEPEV----LAERQGGLQ--NGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPGGPVALDPEQVV 234 (280)
T ss_pred HHHcCCcEecCchh----hHHHHHHHh--CCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCCCCceeeCHHHHH
Confidence 99999988776421 223333332 35689999999998888999999999999999999653 23355666788
Q ss_pred hcCcEEEEeecc-CCChHHHHHHHHCC--CCCCCCceEEEecCChhh
Q 017793 302 AREVDVIGIFRY-RSTWPLCIEFLRSG--KIDVKPLITHRFGFTQKE 345 (366)
Q Consensus 302 ~~~~~~~~~~~~-~~~~~~~~~~l~~g--~~~~~~~~~~~~~l~~~~ 345 (366)
.+++++.++..+ .++++++++++.++ ++.+.+++++.|++ ++
T Consensus 235 ~~~~~i~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~it~~~~l--~~ 279 (280)
T TIGR03366 235 RRWLTIRGVHNYEPRHLDQAVRFLAANGQRFPFEELVGKPFPL--AD 279 (280)
T ss_pred hCCcEEEecCCCCHHHHHHHHHHHHhhCCCCCHHHHhhccccc--cc
Confidence 899999998876 46799999999985 56666788888888 65
No 73
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=100.00 E-value=1e-37 Score=287.43 Aligned_cols=327 Identities=32% Similarity=0.524 Sum_probs=267.8
Q ss_pred ceEEEEee-CCceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCC
Q 017793 15 NMAAWLLG-IKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSE 93 (366)
Q Consensus 15 ~~~~~~~~-~~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~ 93 (366)
|+++++.. +..+.+++.|.|.+.+++|+|+++++++|++|+....|.. .....|.++|+|++|+|+++|++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~--------~~~~~~~~~g~e~~G~v~~~G~~ 72 (332)
T cd08259 1 MKAAILHKPNKPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFF--------PRGKYPLILGHEIVGTVEEVGEG 72 (332)
T ss_pred CeEEEEecCCCceEEEEccCCCCCCCeEEEEEEEEecchhhhHHhcCCC--------CCCCCCeeccccceEEEEEECCC
Confidence 57788876 4788999999999999999999999999999998877321 11345789999999999999999
Q ss_pred CCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhHHH
Q 017793 94 VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVG 172 (366)
Q Consensus 94 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~~a 172 (366)
++.|++||+|++.+...|+.|.+|..+.+++|+....++ ....|+|++|+.++.+.++++|+++++++++.+. .+.+|
T Consensus 73 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta 151 (332)
T cd08259 73 VERFKPGDRVILYYYIPCGKCEYCLSGEENLCRNRAEYG-EEVDGGFAEYVKVPERSLVKLPDNVSDESAALAACVVGTA 151 (332)
T ss_pred CccCCCCCEEEECCCCCCcCChhhhCCCcccCCCccccc-cccCCeeeeEEEechhheEECCCCCCHHHHhhhccHHHHH
Confidence 999999999999988899999999999999999864433 3457999999999999999999999998888775 78889
Q ss_pred HHHHHhCCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHH
Q 017793 173 VHACRRANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN 251 (366)
Q Consensus 173 ~~~l~~~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~ 251 (366)
|++++..++.+++++||+| +|++|++++++++..|+ .++++.+++++.+.+++++.+.+++.. ++.+.+...
T Consensus 152 ~~~l~~~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~-- 224 (332)
T cd08259 152 VHALKRAGVKKGDTVLVTGAGGGVGIHAIQLAKALGA-RVIAVTRSPEKLKILKELGADYVIDGS----KFSEDVKKL-- 224 (332)
T ss_pred HHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHcCCcEEEecH----HHHHHHHhc--
Confidence 9998778899999999998 59999999999999999 577777888888888889987665432 144444332
Q ss_pred hhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCce-eechHhhhcCcEEEEeecc-CCChHHHHHHHHCCCC
Q 017793 252 AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMT-VALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKI 329 (366)
Q Consensus 252 ~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~ 329 (366)
.++|++++++|.. ....++++++++|+++.++....... ........++..+.+.... ...+++++++++++.+
T Consensus 225 ---~~~d~v~~~~g~~-~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 300 (332)
T cd08259 225 ---GGADVVIELVGSP-TIEESLRSLNKGGRLVLIGNVTPDPAPLRPGLLILKEIRIIGSISATKADVEEALKLVKEGKI 300 (332)
T ss_pred ---cCCCEEEECCChH-HHHHHHHHhhcCCEEEEEcCCCCCCcCCCHHHHHhCCcEEEEecCCCHHHHHHHHHHHHcCCC
Confidence 2799999999965 57888999999999999986543221 2223334566666666433 5568889999999988
Q ss_pred CCCCceEEEecCChhhHHHHHHHHHcCCCceEEEee
Q 017793 330 DVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 365 (366)
Q Consensus 330 ~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~ 365 (366)
.+.+.+.|++ ++++++++.+.++...||++++
T Consensus 301 --~~~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~~ 332 (332)
T cd08259 301 --KPVIDRVVSL--EDINEALEDLKSGKVVGRIVLK 332 (332)
T ss_pred --ccceeEEEcH--HHHHHHHHHHHcCCcccEEEeC
Confidence 4557788899 9999999999999889999874
No 74
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=100.00 E-value=4.4e-38 Score=291.52 Aligned_cols=298 Identities=18% Similarity=0.249 Sum_probs=226.1
Q ss_pred CceEEEEecCCCC-CCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCCCCCCCCCCE
Q 017793 24 KTLKIQPYHLPTL-GPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDR 102 (366)
Q Consensus 24 ~~~~~~~~~~p~~-~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~ 102 (366)
+.+++++.|.|+| ++|||||||+|+|||+.|+....... . ..+...+|.++|+|++|+|+++|+++++|++||+
T Consensus 21 ~~~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~--~---~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~ 95 (345)
T cd08293 21 ENFRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDT--G---TDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDI 95 (345)
T ss_pred cceEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhccccc--c---cccCCCccCCCceEeeEEEEEeccCCCCCCCCCE
Confidence 5789999999987 49999999999999999864322100 0 0112346789999999999999999999999999
Q ss_pred EEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccc-----cccchhhHHHHHHHH
Q 017793 103 VALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEE-----GAMCEPLSVGVHACR 177 (366)
Q Consensus 103 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~-----aa~~~~~~~a~~~l~ 177 (366)
|+.. .++|+||++++++.++++|+++++++ ++...++.+||+++.
T Consensus 96 V~~~------------------------------~~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~al~ 145 (345)
T cd08293 96 VTSF------------------------------NWPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALIGIQ 145 (345)
T ss_pred EEec------------------------------CCCceeEEEecHHHeEEcCccccccchhHHhhhcCcHHHHHHHHHH
Confidence 9841 25799999999999999999864432 233347889999984
Q ss_pred -hCCCCCC--CEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCceeeecCCCCcchHHHHHHHHHh
Q 017793 178 -RANVGPE--TNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-LGADETAKVSTDIEDVDTDVGKIQNA 252 (366)
Q Consensus 178 -~~~~~~~--~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~~~~~~~~ 252 (366)
.++++++ ++|||+| +|++|++++|+|+..|+.+|+++++++++.+++++ +|++.++++.+ .++.+.++++.
T Consensus 146 ~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~--~~~~~~i~~~~-- 221 (345)
T cd08293 146 EKGHITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKT--DNVAERLRELC-- 221 (345)
T ss_pred HhccCCCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCC--CCHHHHHHHHC--
Confidence 5778877 9999998 59999999999999998568888889999998876 99999887643 56766666553
Q ss_pred hCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCC---Cce----eec--hHhh-hcCcEEEEeec--c----CCC
Q 017793 253 MGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT---EMT----VAL--TPAA-AREVDVIGIFR--Y----RST 316 (366)
Q Consensus 253 ~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~---~~~----~~~--~~~~-~~~~~~~~~~~--~----~~~ 316 (366)
++++|++||++|+. .+..++++|+++|+++.+|.... ... ... ..+. .+++....... . .+.
T Consensus 222 -~~gvd~vid~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (345)
T cd08293 222 -PEGVDVYFDNVGGE-ISDTVISQMNENSHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRERFLVLNYKDKFEEA 299 (345)
T ss_pred -CCCceEEEECCCcH-HHHHHHHHhccCCEEEEEeeeecccCccCccccccchhHHHhhhcceEEEEEEeeccHhHHHHH
Confidence 46899999999976 67899999999999999984321 111 110 1111 22333322211 1 234
Q ss_pred hHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793 317 WPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 366 (366)
Q Consensus 317 ~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~ 366 (366)
+++++++++++.+.+ .....+++ +++++|++.+.+++..||+|+++
T Consensus 300 ~~~~~~l~~~g~i~~--~~~~~~~l--~~~~~A~~~~~~~~~~gkvvl~~ 345 (345)
T cd08293 300 IAQLSQWVKEGKLKV--KETVYEGL--ENAGEAFQSMMNGGNIGKQIVKV 345 (345)
T ss_pred HHHHHHHHHCCCccc--eeEEeecH--HHHHHHHHHHhcCCCCCeEEEEC
Confidence 677889999999943 34445678 99999999999999999999875
No 75
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=1.3e-37 Score=286.54 Aligned_cols=320 Identities=24% Similarity=0.374 Sum_probs=263.2
Q ss_pred ceEEEEeeCC-----ceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEE
Q 017793 15 NMAAWLLGIK-----TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEE 89 (366)
Q Consensus 15 ~~~~~~~~~~-----~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~ 89 (366)
|++.++.++. .+.+++.+.|.++++||+||+.++++|++|+....|.. .....|.++|+|++|+|++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~--------~~~~~~~~~g~e~~G~V~~ 72 (329)
T cd08298 1 MKAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDL--------PPPKLPLIPGHEIVGRVEA 72 (329)
T ss_pred CeEEEEecCCCCCCCCceEEeccCCCCCCCEEEEEEEEEeccHHHHHHHhCCC--------CCCCCCccccccccEEEEE
Confidence 5677777554 68888888888999999999999999999998877321 0134578999999999999
Q ss_pred eCCCCCCCCCCCEEEEcCC-cCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-
Q 017793 90 VGSEVKSLEVGDRVALEPG-ISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE- 167 (366)
Q Consensus 90 vG~~v~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~- 167 (366)
+|+++++|++||+|.+.+. ++|+.|.+|..+.+++|+.+.+.+. ...|+|+||+.++.+.++++|+++++.+++.+.
T Consensus 73 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~ 151 (329)
T cd08298 73 VGPGVTRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFTGY-TVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLC 151 (329)
T ss_pred ECCCCCCCcCCCEEEEeccCCCCCCChhHhCcChhhCCCcccccc-ccCCceEEEEEecchhEEECCCCCCHHHhhHhhh
Confidence 9999999999999987543 6889999999999999998877664 357999999999999999999999999888665
Q ss_pred hhHHHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHH
Q 017793 168 PLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVG 247 (366)
Q Consensus 168 ~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~ 247 (366)
.+.+||+++..+++++++++||+|+|++|++++++++..|+ ++++++.++++.++++++|++..+++...
T Consensus 152 ~~~ta~~~~~~~~~~~~~~vlV~g~g~vg~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~--------- 221 (329)
T cd08298 152 AGIIGYRALKLAGLKPGQRLGLYGFGASAHLALQIARYQGA-EVFAFTRSGEHQELARELGADWAGDSDDL--------- 221 (329)
T ss_pred hhHHHHHHHHhhCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEcCChHHHHHHHHhCCcEEeccCcc---------
Confidence 78899999977899999999999999999999999999998 68888888899999999999876654321
Q ss_pred HHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCc-eeechHhhhcCcEEEEeecc-CCChHHHHHHHH
Q 017793 248 KIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEM-TVALTPAAAREVDVIGIFRY-RSTWPLCIEFLR 325 (366)
Q Consensus 248 ~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~ 325 (366)
.++++|+++++.+...++..++++++++|+++.+|...... .++.. .+.....+.+.... .+.+++++++++
T Consensus 222 -----~~~~vD~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~l~~ 295 (329)
T cd08298 222 -----PPEPLDAAIIFAPVGALVPAALRAVKKGGRVVLAGIHMSDIPAFDYE-LLWGEKTIRSVANLTRQDGEEFLKLAA 295 (329)
T ss_pred -----CCCcccEEEEcCCcHHHHHHHHHHhhcCCEEEEEcCCCCCCCccchh-hhhCceEEEEecCCCHHHHHHHHHHHH
Confidence 14579999998777778999999999999999987533211 11221 23455566665544 456888999999
Q ss_pred CCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEe
Q 017793 326 SGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF 364 (366)
Q Consensus 326 ~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi 364 (366)
++.+.+ . .+.|++ +++++|++.+++++..||+++
T Consensus 296 ~~~l~~--~-~~~~~~--~~~~~a~~~~~~~~~~~~~v~ 329 (329)
T cd08298 296 EIPIKP--E-VETYPL--EEANEALQDLKEGRIRGAAVL 329 (329)
T ss_pred cCCCCc--e-EEEEeH--HHHHHHHHHHHcCCCcceeeC
Confidence 998843 3 578888 999999999999999999874
No 76
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=100.00 E-value=4.3e-38 Score=289.12 Aligned_cols=289 Identities=19% Similarity=0.226 Sum_probs=230.5
Q ss_pred eCCceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 017793 22 GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGD 101 (366)
Q Consensus 22 ~~~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd 101 (366)
.++.+++++.|.|+|++|||||||.|+|+|+.+..-.. . ....|.++|.|++|+|+++|+ .|++||
T Consensus 15 ~~~~l~~~~~~~p~~~~~evlv~v~a~~~n~~~~~g~~---------~--~~~~~~i~G~~~~g~v~~~~~---~~~~Gd 80 (325)
T TIGR02825 15 TDSDFELKTVELPPLNNGEVLLEALFLSVDPYMRVAAK---------R--LKEGDTMMGQQVARVVESKNV---ALPKGT 80 (325)
T ss_pred CCCceEEEeccCCCCCCCcEEEEEEEEecCHHHhcccC---------c--CCCCCcEecceEEEEEEeCCC---CCCCCC
Confidence 44789999999999999999999999999996553211 1 123478999999999999874 599999
Q ss_pred EEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEEC----CCCCCcccc-ccc-hhhHHHHHH
Q 017793 102 RVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKL----PDNVSLEEG-AMC-EPLSVGVHA 175 (366)
Q Consensus 102 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~----P~~~~~~~a-a~~-~~~~~a~~~ 175 (366)
||+. .++|++|+.++.+.+.++ |+++++++| +++ .++.|||++
T Consensus 81 rV~~-------------------------------~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~~ 129 (325)
T TIGR02825 81 IVLA-------------------------------SPGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYFG 129 (325)
T ss_pred EEEE-------------------------------ecCceeeEEechhheEEccccccCCCCHHHHHHhcccHHHHHHHH
Confidence 9984 246899999999988887 899999887 445 478999999
Q ss_pred H-HhCCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhh
Q 017793 176 C-RRANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM 253 (366)
Q Consensus 176 l-~~~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (366)
+ +.+++++|++|||+| +|++|++++|+|+..|+ +++++++++++.++++++|++.++++... ..+.+.++.. .
T Consensus 130 l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~-~Vi~~~~s~~~~~~~~~lGa~~vi~~~~~-~~~~~~~~~~---~ 204 (325)
T TIGR02825 130 LLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKVAYLKKLGFDVAFNYKTV-KSLEETLKKA---S 204 (325)
T ss_pred HHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEecccc-ccHHHHHHHh---C
Confidence 7 568899999999998 69999999999999999 68888889999999999999998886432 2444444333 3
Q ss_pred CCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCC-----Cce--eechHhhhcCcEEEEeecc-------CCChHH
Q 017793 254 GSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT-----EMT--VALTPAAAREVDVIGIFRY-------RSTWPL 319 (366)
Q Consensus 254 ~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~--~~~~~~~~~~~~~~~~~~~-------~~~~~~ 319 (366)
++++|++||++|+. .+..++++++++|+++.+|.... ... .....+.++.+++.++... .+.+++
T Consensus 205 ~~gvdvv~d~~G~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 283 (325)
T TIGR02825 205 PDGYDCYFDNVGGE-FSNTVIGQMKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEVRQKALKE 283 (325)
T ss_pred CCCeEEEEECCCHH-HHHHHHHHhCcCcEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhhhHHHHHH
Confidence 56899999999975 67899999999999999985432 111 1233456677787776532 235788
Q ss_pred HHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEee
Q 017793 320 CIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 365 (366)
Q Consensus 320 ~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~ 365 (366)
+++++++|++.+ .+...|++ +++++|++.+++++..||+|++
T Consensus 284 ~~~l~~~g~l~~--~~~~~~~l--~~~~~A~~~~~~~~~~gkvVv~ 325 (325)
T TIGR02825 284 LLKWVLEGKIQY--KEYVIEGF--ENMPAAFMGMLKGENLGKTIVK 325 (325)
T ss_pred HHHHHHCCCccc--ceeccccH--HHHHHHHHHHhcCCCCCeEEeC
Confidence 999999999954 34566788 9999999999999999999974
No 77
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=100.00 E-value=1.2e-37 Score=286.18 Aligned_cols=306 Identities=23% Similarity=0.265 Sum_probs=247.3
Q ss_pred ceEEEEeeCC----ceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEe
Q 017793 15 NMAAWLLGIK----TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEV 90 (366)
Q Consensus 15 ~~~~~~~~~~----~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~v 90 (366)
||++++.+++ .++++++|.|.++++||+|||.++++|++|+....|... .....|.++|||++|+|+++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~-------~~~~~p~~~G~e~~G~V~~~ 73 (324)
T cd08292 1 MRAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYG-------YKPELPAIGGSEAVGVVDAV 73 (324)
T ss_pred CeeEEEccCCChhHeEEEeecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCC-------CCCCCCCCCCcceEEEEEEe
Confidence 5778877553 378899999999999999999999999999988874211 01235789999999999999
Q ss_pred CCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hh
Q 017793 91 GSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PL 169 (366)
Q Consensus 91 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~ 169 (366)
|+++++|++||+|++. ...|+|++|+.++...++++|+++++++++.+. .+
T Consensus 74 G~~v~~~~~Gd~V~~~----------------------------~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~ 125 (324)
T cd08292 74 GEGVKGLQVGQRVAVA----------------------------PVHGTWAEYFVAPADGLVPLPDGISDEVAAQLIAMP 125 (324)
T ss_pred CCCCCCCCCCCEEEec----------------------------cCCCcceeEEEEchHHeEECCCCCCHHHhhhccccH
Confidence 9999999999999863 136899999999999999999999999998775 56
Q ss_pred HHHHHHHHhCCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHH
Q 017793 170 SVGVHACRRANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGK 248 (366)
Q Consensus 170 ~~a~~~l~~~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~ 248 (366)
.+|+++++..++++|++|||+| +|.+|++++|+|+.+|+ .++++..++++.+.++++|++.++++. ..++...+.+
T Consensus 126 ~ta~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~i~~ 202 (324)
T cd08292 126 LSALMLLDFLGVKPGQWLIQNAAGGAVGKLVAMLAAARGI-NVINLVRRDAGVAELRALGIGPVVSTE--QPGWQDKVRE 202 (324)
T ss_pred HHHHHHHHhhCCCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHhcCCCEEEcCC--CchHHHHHHH
Confidence 7788888778899999999998 59999999999999999 566666777777888889988777643 3456666655
Q ss_pred HHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCC-CceeechHhhhcCcEEEEeecc-----------CCC
Q 017793 249 IQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT-EMTVALTPAAAREVDVIGIFRY-----------RST 316 (366)
Q Consensus 249 ~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~-----------~~~ 316 (366)
+. .+.++|++|||+|+. ....++++++++|+++.+|.... ...+.......++.++.++... ...
T Consensus 203 ~~--~~~~~d~v~d~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (324)
T cd08292 203 AA--GGAPISVALDSVGGK-LAGELLSLLGEGGTLVSFGSMSGEPMQISSGDLIFKQATVRGFWGGRWSQEMSVEYRKRM 279 (324)
T ss_pred Hh--CCCCCcEEEECCCCh-hHHHHHHhhcCCcEEEEEecCCCCCCcCCHHHHhhCCCEEEEEEcHHhhhhcCHHHHHHH
Confidence 43 367899999999986 67888999999999999986532 2223333455678888776543 235
Q ss_pred hHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEee
Q 017793 317 WPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 365 (366)
Q Consensus 317 ~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~ 365 (366)
++++++++.+|.+.+ .+.+.|++ +++.+|++.+.++...||++++
T Consensus 280 ~~~~~~l~~~g~i~~--~~~~~~~~--~~~~~a~~~~~~~~~~~kvvv~ 324 (324)
T cd08292 280 IAELLTLALKGQLLL--PVEAVFDL--GDAAKAAAASMRPGRAGKVLLR 324 (324)
T ss_pred HHHHHHHHHCCCccC--ccccEecH--HHHHHHHHHHHcCCCCceEEeC
Confidence 788999999999953 34677888 9999999999988888999874
No 78
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=100.00 E-value=4.7e-38 Score=264.95 Aligned_cols=315 Identities=18% Similarity=0.241 Sum_probs=242.1
Q ss_pred ccCCcccceEEEEeeC----CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccce
Q 017793 8 DEGDKNQNMAAWLLGI----KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHEC 83 (366)
Q Consensus 8 ~~~~~~~~~~~~~~~~----~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~ 83 (366)
..+|+...|++++... +.+++++++.|....++|+||.+|+.|||+|+..++|-+... +++|.|-|+|+
T Consensus 13 a~q~~~~~kalvY~~hgdP~kVlql~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvr-------P~~PAVgGnEG 85 (354)
T KOG0025|consen 13 ASQMPARSKALVYSEHGDPAKVLQLKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVR-------PELPAVGGNEG 85 (354)
T ss_pred ccccccccceeeecccCCchhhheeecccCCCCCCCceeeeeeecCCChHHhhhhccccCCC-------CCCCcccCCcc
Confidence 4456666677777733 568889999998888889999999999999999999543222 45689999999
Q ss_pred eEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCcccc
Q 017793 84 AGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEG 163 (366)
Q Consensus 84 ~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~a 163 (366)
+|+|+.+|+++++|++||+|... ....|+|++|.+.+++.++++++.++.+.|
T Consensus 86 v~eVv~vGs~vkgfk~Gd~VIp~---------------------------~a~lGtW~t~~v~~e~~Li~vd~~~pl~~A 138 (354)
T KOG0025|consen 86 VGEVVAVGSNVKGFKPGDWVIPL---------------------------SANLGTWRTEAVFSESDLIKVDKDIPLASA 138 (354)
T ss_pred eEEEEEecCCcCccCCCCeEeec---------------------------CCCCccceeeEeecccceEEcCCcCChhhh
Confidence 99999999999999999999864 245899999999999999999999999999
Q ss_pred ccch-hhHHHHHHHHh-CCCCCCCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEcCCh---hHHHHHHHcCCceeeecCC
Q 017793 164 AMCE-PLSVGVHACRR-ANVGPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDV---QRLSIARNLGADETAKVST 237 (366)
Q Consensus 164 a~~~-~~~~a~~~l~~-~~~~~~~~vlI~G~-g~vG~~ai~la~~~g~~~vv~v~~~~---~~~~~~~~lg~~~~~~~~~ 237 (366)
|++. ..+|||.+++. -++++||+|.=.|+ +++|++.||+||+.|++.+-+++..+ +-.+.++.+||++++--.+
T Consensus 139 AT~~VNP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeee 218 (354)
T KOG0025|consen 139 ATLSVNPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEE 218 (354)
T ss_pred heeccCchHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHH
Confidence 9997 78999999965 78999998777785 99999999999999996555553333 2334567799999875221
Q ss_pred CCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEc-ccCCCceeechHhhhcCcEEEEeecc---
Q 017793 238 DIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIG-LAKTEMTVALTPAAAREVDVIGIFRY--- 313 (366)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~--- 313 (366)
... ....+.. .....+.+.|+|+|+. ......+.|.+||.++.+| ++.....++...++++.+.+.|+|..
T Consensus 219 l~~---~~~~k~~-~~~~~prLalNcVGGk-sa~~iar~L~~GgtmvTYGGMSkqPv~~~ts~lIFKdl~~rGfWvt~W~ 293 (354)
T KOG0025|consen 219 LRD---RKMKKFK-GDNPRPRLALNCVGGK-SATEIARYLERGGTMVTYGGMSKQPVTVPTSLLIFKDLKLRGFWVTRWK 293 (354)
T ss_pred hcc---hhhhhhh-ccCCCceEEEeccCch-hHHHHHHHHhcCceEEEecCccCCCcccccchheeccceeeeeeeeehh
Confidence 110 0111110 1245689999999988 4556669999999999998 56667788889999999999999865
Q ss_pred ---------CCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHH-cCCCceEEEee
Q 017793 314 ---------RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISA-QGGNAIKVMFN 365 (366)
Q Consensus 314 ---------~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~-~~~~~gkvvi~ 365 (366)
.+.++++.+|++.|++.... ....+| ++...|++... .-...||-+|.
T Consensus 294 ~~~~~pe~~~~~i~~~~~l~~~G~i~~~~--~e~v~L--~~~~tald~~L~~~~~~~Kq~i~ 351 (354)
T KOG0025|consen 294 KEHKSPEERKEMIDELCDLYRRGKLKAPN--CEKVPL--ADHKTALDAALSKFGKSGKQIIV 351 (354)
T ss_pred hccCCcHHHHHHHHHHHHHHHcCeecccc--ceeeec--hhhhHHHHHHHHHhccCCceEEE
Confidence 13466789999999994333 234567 77777777533 22333555543
No 79
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=100.00 E-value=8.4e-38 Score=288.72 Aligned_cols=295 Identities=19% Similarity=0.202 Sum_probs=234.0
Q ss_pred CceEEEEecC----CCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccce--eEEEEEeCCCCCCC
Q 017793 24 KTLKIQPYHL----PTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHEC--AGIIEEVGSEVKSL 97 (366)
Q Consensus 24 ~~~~~~~~~~----p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~--~G~V~~vG~~v~~~ 97 (366)
+.+++++.|. |+|++|||||||+|+||||.|++...|.+. .....|+++|+++ .|.+..+|+++++|
T Consensus 19 ~~~~~~~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~-------~~~~~p~~~g~~~~g~~~~~~v~~~v~~~ 91 (338)
T cd08295 19 SDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDD-------SLYLPPFKPGEVITGYGVAKVVDSGNPDF 91 (338)
T ss_pred cceEEEEecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCc-------cccCCCcCCCCeEeccEEEEEEecCCCCC
Confidence 5789988877 889999999999999999999988874210 0124577888754 45555688999999
Q ss_pred CCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecC-CceEECC-CCCCcc-ccccch-hhHHHH
Q 017793 98 EVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPA-KLCYKLP-DNVSLE-EGAMCE-PLSVGV 173 (366)
Q Consensus 98 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~-~~~~~~P-~~~~~~-~aa~~~-~~~~a~ 173 (366)
++||+|+. .|+|+||+++++ ..++++| +++++. +++.+. ++.|||
T Consensus 92 ~vGd~V~~-------------------------------~g~~aey~~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~tA~ 140 (338)
T cd08295 92 KVGDLVWG-------------------------------FTGWEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAY 140 (338)
T ss_pred CCCCEEEe-------------------------------cCCceeEEEecchhceeecCCCCCCHHHHHHhcccHHHHHH
Confidence 99999973 368999999999 7999995 668875 566554 788999
Q ss_pred HHHH-hCCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCceeeecCCCCcchHHHHHHHH
Q 017793 174 HACR-RANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-LGADETAKVSTDIEDVDTDVGKIQ 250 (366)
Q Consensus 174 ~~l~-~~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~~~~~~ 250 (366)
+++. ..++++|++|||+| +|++|++++|+|+.+|+ .++++++++++.+++++ +|++.++++.. ..++.+.+.+..
T Consensus 141 ~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~-~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~-~~~~~~~i~~~~ 218 (338)
T cd08295 141 AGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGC-YVVGSAGSDEKVDLLKNKLGFDDAFNYKE-EPDLDAALKRYF 218 (338)
T ss_pred HHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCceeEEcCC-cccHHHHHHHhC
Confidence 9984 58899999999999 59999999999999999 68888889999999998 99998887543 235655555442
Q ss_pred HhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCc------eeechHhhhcCcEEEEeecc------CCChH
Q 017793 251 NAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEM------TVALTPAAAREVDVIGIFRY------RSTWP 318 (366)
Q Consensus 251 ~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~------~~~~~~~~~~~~~~~~~~~~------~~~~~ 318 (366)
++++|++||++|+ ..+..++++|+++|+++.+|...... ..+...+..+++++.++... .+.++
T Consensus 219 ---~~gvd~v~d~~g~-~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~ 294 (338)
T cd08295 219 ---PNGIDIYFDNVGG-KMLDAVLLNMNLHGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYLHRYPEFLE 294 (338)
T ss_pred ---CCCcEEEEECCCH-HHHHHHHHHhccCcEEEEecccccCCCCCCCCccCHHHHhhccceeeEEEehhhHHHHHHHHH
Confidence 4689999999997 57889999999999999998543211 12234566677788775432 23477
Q ss_pred HHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793 319 LCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 366 (366)
Q Consensus 319 ~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~ 366 (366)
++++++.+|.+++ .+...|++ +++++|++.+.++...||+|+++
T Consensus 295 ~~~~l~~~g~l~~--~~~~~~~l--~~~~~A~~~~~~~~~~GkvVl~~ 338 (338)
T cd08295 295 EMSGYIKEGKLKY--VEDIADGL--ESAPEAFVGLFTGSNIGKQVVKV 338 (338)
T ss_pred HHHHHHHCCCeEc--eeecccCH--HHHHHHHHHHhcCCCCceEEEEC
Confidence 8899999999943 34456888 99999999999999999999874
No 80
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=100.00 E-value=1.1e-37 Score=286.93 Aligned_cols=297 Identities=20% Similarity=0.245 Sum_probs=235.5
Q ss_pred cceEEEEeeC-------CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEE
Q 017793 14 QNMAAWLLGI-------KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGI 86 (366)
Q Consensus 14 ~~~~~~~~~~-------~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~ 86 (366)
+|+++++.++ +.+++++.|.|+|++|||+|||.++|||+.|.+... . ....|.++|+|++|+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~---------~--~~~~p~v~G~e~~G~ 70 (329)
T cd08294 2 KAKTWVLKKHFDGKPKESDFELVEEELPPLKDGEVLCEALFLSVDPYMRPYSK---------R--LNEGDTMIGTQVAKV 70 (329)
T ss_pred CceEEEEecCCCCCCCccceEEEecCCCCCCCCcEEEEEEEEecCHHHhcccc---------c--CCCCCcEecceEEEE
Confidence 3666666641 458999999999999999999999999988764211 1 124588999999999
Q ss_pred EEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCC---ceEECCCCCC--c-
Q 017793 87 IEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAK---LCYKLPDNVS--L- 160 (366)
Q Consensus 87 V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~---~~~~~P~~~~--~- 160 (366)
|++ .+++|++||||+. .++|++|+.++.+ .++++|++++ +
T Consensus 71 V~~---~~~~~~~Gd~V~~-------------------------------~~~~~~~~~~~~~~~~~~~~iP~~~~~~~~ 116 (329)
T cd08294 71 IES---KNSKFPVGTIVVA-------------------------------SFGWRTHTVSDGKDQPDLYKLPADLPDDLP 116 (329)
T ss_pred Eec---CCCCCCCCCEEEe-------------------------------eCCeeeEEEECCccccceEECCccccccCC
Confidence 985 4567999999984 2578999999999 9999999988 2
Q ss_pred ---cccccchhhHHHHHHH-HhCCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeec
Q 017793 161 ---EEGAMCEPLSVGVHAC-RRANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKV 235 (366)
Q Consensus 161 ---~~aa~~~~~~~a~~~l-~~~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~ 235 (366)
..++...++.|||+++ +..++++|++|||+| +|++|++++|+|+..|+ .++++++++++.++++++|++.++++
T Consensus 117 ~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~-~vi~~~~s~~~~~~l~~~Ga~~vi~~ 195 (329)
T cd08294 117 PSLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGC-KVIGCAGSDDKVAWLKELGFDAVFNY 195 (329)
T ss_pred hHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeC
Confidence 2232334888999998 568899999999998 69999999999999999 68888899999999999999998886
Q ss_pred CCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCC----c---eeechHhhhcCcEEE
Q 017793 236 STDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE----M---TVALTPAAAREVDVI 308 (366)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~----~---~~~~~~~~~~~~~~~ 308 (366)
.. +++.+.++++ .++++|++||++|+ ..+..++++++++|+++.+|..... . ......+..+++++.
T Consensus 196 ~~--~~~~~~v~~~---~~~gvd~vld~~g~-~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 269 (329)
T cd08294 196 KT--VSLEEALKEA---APDGIDCYFDNVGG-EFSSTVLSHMNDFGRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKME 269 (329)
T ss_pred CC--ccHHHHHHHH---CCCCcEEEEECCCH-HHHHHHHHhhccCCEEEEEcchhccCCCCCCcCcccHHHHhhhcceEE
Confidence 43 5666666544 24689999999997 5789999999999999998843211 0 122334667788888
Q ss_pred Eeecc------CCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793 309 GIFRY------RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 366 (366)
Q Consensus 309 ~~~~~------~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~ 366 (366)
+++.. .+.++++++++++|.+.+. ....|++ +++++|++.+.+++..||+|+++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~l--~~~~~A~~~~~~~~~~gkvvv~~ 329 (329)
T cd08294 270 GFIVYRWQDRWPEALKQLLKWIKEGKLKYR--EHVTEGF--ENMPQAFIGMLKGENTGKAIVKV 329 (329)
T ss_pred EEEhhhhHHHHHHHHHHHHHHHHCCCCcCC--cccccCH--HHHHHHHHHHHcCCCCCeEEEeC
Confidence 76543 2246788999999999544 3355788 99999999999999999999975
No 81
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=100.00 E-value=3e-37 Score=283.65 Aligned_cols=319 Identities=26% Similarity=0.416 Sum_probs=256.8
Q ss_pred ceEEEEeeC--CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCC
Q 017793 15 NMAAWLLGI--KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGS 92 (366)
Q Consensus 15 ~~~~~~~~~--~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~ 92 (366)
|+++++.++ ..+++++.+.|.++++||+||+.++++|++|+....+ .....+|.++|||++|+|+++|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~---------~~~~~~~~~~g~e~~G~v~~vG~ 71 (325)
T cd08264 1 MKALVFEKSGIENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINA---------VKVKPMPHIPGAEFAGVVEEVGD 71 (325)
T ss_pred CeeEEeccCCCCceEEEeccCCCCCCCeEEEEEEEEEechHHHHHHhC---------CCCCCCCeecccceeEEEEEECC
Confidence 567777644 4788888888889999999999999999999987662 11123477899999999999999
Q ss_pred CCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhHH
Q 017793 93 EVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSV 171 (366)
Q Consensus 93 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~~ 171 (366)
++++|++||+|++.+...|++|.+|..|+.++|++..+++. ...|+|++|+.++.+.++++|+++++++++.+. .+.+
T Consensus 72 ~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~ 150 (325)
T cd08264 72 HVKGVKKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGV-VSNGGYAEYIVVPEKNLFKIPDSISDELAASLPVAALT 150 (325)
T ss_pred CCCCCCCCCEEEECCCcCCCCChhhcCCCccccCccceeec-cCCCceeeEEEcCHHHceeCCCCCCHHHhhhhhhhhHH
Confidence 99999999999999888999999999999999998765543 357999999999999999999999999888775 6788
Q ss_pred HHHHHHhCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHH
Q 017793 172 GVHACRRANVGPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQ 250 (366)
Q Consensus 172 a~~~l~~~~~~~~~~vlI~G~-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~ 250 (366)
||+++...+++++++++|+|+ |++|++++++|+.+|+ .++++. +.+.++++|++.+++.. +....+.++
T Consensus 151 a~~~l~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~-~v~~~~----~~~~~~~~g~~~~~~~~----~~~~~l~~~- 220 (325)
T cd08264 151 AYHALKTAGLGPGETVVVFGASGNTGIFAVQLAKMMGA-EVIAVS----RKDWLKEFGADEVVDYD----EVEEKVKEI- 220 (325)
T ss_pred HHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEe----HHHHHHHhCCCeeecch----HHHHHHHHH-
Confidence 999987788999999999995 9999999999999999 566664 23677889988776542 123333333
Q ss_pred HhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccC-CCceeechHhhhcCcEEEEeecc-CCChHHHHHHHHCCC
Q 017793 251 NAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK-TEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGK 328 (366)
Q Consensus 251 ~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~ 328 (366)
. +++|+++|++|+ ..+..++++|+++|+++.+|... ....++...+..++.++.+...+ ++.++++++++....
T Consensus 221 --~-~~~d~vl~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 296 (325)
T cd08264 221 --T-KMADVVINSLGS-SFWDLSLSVLGRGGRLVTFGTLTGGEVKLDLSDLYSKQISIIGSTGGTRKELLELVKIAKDLK 296 (325)
T ss_pred --h-CCCCEEEECCCH-HHHHHHHHhhccCCEEEEEecCCCCCCccCHHHHhhcCcEEEEccCCCHHHHHHHHHHHHcCC
Confidence 2 679999999996 58899999999999999998642 22334445566667777776544 557888999986433
Q ss_pred CCCCCceEEEecCChhhHHHHHHHHHcCCCceEEE
Q 017793 329 IDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVM 363 (366)
Q Consensus 329 ~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvv 363 (366)
..+.+.|++ +++++|++.+.++...+|++
T Consensus 297 ----~~~~~~~~~--~~~~~a~~~~~~~~~~~kv~ 325 (325)
T cd08264 297 ----VKVWKTFKL--EEAKEALKELFSKERDGRIL 325 (325)
T ss_pred ----ceeEEEEcH--HHHHHHHHHHHcCCCccccC
Confidence 335678888 99999999999887777753
No 82
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=100.00 E-value=1.1e-36 Score=281.48 Aligned_cols=334 Identities=28% Similarity=0.447 Sum_probs=270.7
Q ss_pred ceEEEEe---eCCceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeC
Q 017793 15 NMAAWLL---GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVG 91 (366)
Q Consensus 15 ~~~~~~~---~~~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG 91 (366)
|+++++. .+..+.+++.+.|.+.+++|+|++.++++|++|+.+..|... ....+|.++|||++|+|+.+|
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~-------~~~~~~~~~g~e~~G~v~~~G 73 (342)
T cd08266 1 MKAVVIRGHGGPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPG-------IKLPLPHILGSDGAGVVEAVG 73 (342)
T ss_pred CeEEEEecCCCccceeEeecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCC-------CCCCCCeecccceEEEEEEeC
Confidence 5778877 445788888888888999999999999999999988774210 113457889999999999999
Q ss_pred CCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhH
Q 017793 92 SEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLS 170 (366)
Q Consensus 92 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~ 170 (366)
++++.|++||+|++.+..+|++|.+|..+.++.|+...+.+. ...|+|++|+.++.+.++++|+++++++++.+. .+.
T Consensus 74 ~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~ 152 (342)
T cd08266 74 PGVTNVKPGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGE-HVDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFL 152 (342)
T ss_pred CCCCCCCCCCEEEEccccccccchhhcccccccccccccccc-ccCcceeEEEEechHHceeCCCCCCHHHHHhhhhHHH
Confidence 999999999999999999999999999999999998766553 357899999999999999999999998888775 677
Q ss_pred HHHHHH-HhCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHH
Q 017793 171 VGVHAC-RRANVGPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGK 248 (366)
Q Consensus 171 ~a~~~l-~~~~~~~~~~vlI~G~-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~ 248 (366)
+|++++ +..+++++++++|+|+ +.+|++++++++..|+ .++.+++++++.+.+++++.+.+++. ...++...+..
T Consensus 153 ~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 229 (342)
T cd08266 153 TAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGA-TVIATAGSEDKLERAKELGADYVIDY--RKEDFVREVRE 229 (342)
T ss_pred HHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCeEEec--CChHHHHHHHH
Confidence 888887 4578899999999984 7999999999999999 57777888888888888887766543 22344444443
Q ss_pred HHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCC-ceeechHhhhcCcEEEEeecc-CCChHHHHHHHHC
Q 017793 249 IQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE-MTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRS 326 (366)
Q Consensus 249 ~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~ 326 (366)
.. .+.++|++++++|.. .+...+++++++|+++.++..... ........+.++..+.+.... ...+.++++++++
T Consensus 230 ~~--~~~~~d~~i~~~g~~-~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 306 (342)
T cd08266 230 LT--GKRGVDVVVEHVGAA-TWEKSLKSLARGGRLVTCGATTGYEAPIDLRHVFWRQLSILGSTMGTKAELDEALRLVFR 306 (342)
T ss_pred Hh--CCCCCcEEEECCcHH-HHHHHHHHhhcCCEEEEEecCCCCCCCcCHHHHhhcceEEEEEecCCHHHHHHHHHHHHc
Confidence 32 246799999999964 788899999999999999855432 222222345667777776544 4568889999999
Q ss_pred CCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793 327 GKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 366 (366)
Q Consensus 327 g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~ 366 (366)
+.+ .+.+++.|++ ++++++++.+.++...+|++++.
T Consensus 307 ~~l--~~~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~~~ 342 (342)
T cd08266 307 GKL--KPVIDSVFPL--EEAAEAHRRLESREQFGKIVLTP 342 (342)
T ss_pred CCc--ccceeeeEcH--HHHHHHHHHHHhCCCCceEEEeC
Confidence 988 4557788888 99999999999888889999863
No 83
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=5e-37 Score=285.07 Aligned_cols=329 Identities=23% Similarity=0.325 Sum_probs=253.9
Q ss_pred ceEEEEeeC---CceEEEE-ecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccc-----------ccc-CccCCCCcc
Q 017793 15 NMAAWLLGI---KTLKIQP-YHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTM-----------RCA-NFIVKKPMV 78 (366)
Q Consensus 15 ~~~~~~~~~---~~~~~~~-~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~-----------~~~-~~~~~~p~i 78 (366)
||++++.++ ..+.+.+ .+.|.+.+++|+|||.++++|++|+.+..|.+.... +.. ......|.+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 80 (350)
T cd08274 1 MRAVLLTGHGGLDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRI 80 (350)
T ss_pred CeEEEEeccCCccceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcc
Confidence 567777654 3456654 577788999999999999999999998875431100 000 012456889
Q ss_pred cccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCC
Q 017793 79 IGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNV 158 (366)
Q Consensus 79 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~ 158 (366)
+|||++|+|+++|+++++|++||+|++.+...|+.|..|. .+.+++ ...+|+|++|+.++.+.++++|+++
T Consensus 81 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~--------~~~~~~-~~~~g~~~~~~~v~~~~~~~ip~~~ 151 (350)
T cd08274 81 QGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPA--------DIDYIG-SERDGGFAEYTVVPAENAYPVNSPL 151 (350)
T ss_pred cCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCccccc--------cccccC-CCCCccceEEEEecHHHceeCCCCC
Confidence 9999999999999999999999999998777777765532 222222 1236999999999999999999999
Q ss_pred Cccccccch-hhHHHHHHHHhCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecC
Q 017793 159 SLEEGAMCE-PLSVGVHACRRANVGPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVS 236 (366)
Q Consensus 159 ~~~~aa~~~-~~~~a~~~l~~~~~~~~~~vlI~G~-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~ 236 (366)
++.+++.+. .+.+||++++..++++++++||+|+ |++|++++|+|+.+|++ +++++.++ +.+.++++|++.+.+.
T Consensus 152 ~~~~~a~l~~~~~ta~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~-vi~~~~~~-~~~~~~~~g~~~~~~~- 228 (350)
T cd08274 152 SDVELATFPCSYSTAENMLERAGVGAGETVLVTGASGGVGSALVQLAKRRGAI-VIAVAGAA-KEEAVRALGADTVILR- 228 (350)
T ss_pred CHHHHHhcccHHHHHHHHHhhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCCE-EEEEeCch-hhHHHHhcCCeEEEeC-
Confidence 998887765 7888999887788999999999995 99999999999999994 66666554 7888899998754432
Q ss_pred CCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCC-ceeechHhhhcCcEEEEeecc-C
Q 017793 237 TDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE-MTVALTPAAAREVDVIGIFRY-R 314 (366)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~-~ 314 (366)
....+.+ ... +.+.++|++||++|+. .++.++++++++|+++.+|..... ..++...++.++.++.++... .
T Consensus 229 -~~~~~~~--~~~--~~~~~~d~vi~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (350)
T cd08274 229 -DAPLLAD--AKA--LGGEPVDVVADVVGGP-LFPDLLRLLRPGGRYVTAGAIAGPVVELDLRTLYLKDLTLFGSTLGTR 302 (350)
T ss_pred -CCccHHH--HHh--hCCCCCcEEEecCCHH-HHHHHHHHhccCCEEEEecccCCccccCCHHHhhhcceEEEEeecCCH
Confidence 2222222 122 2367899999999975 788999999999999999854332 234444556778888877665 5
Q ss_pred CChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEee
Q 017793 315 STWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 365 (366)
Q Consensus 315 ~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~ 365 (366)
+.++++++++.++.+ .+.+.+.|++ ++++++++.+.++...||++++
T Consensus 303 ~~~~~~~~l~~~~~l--~~~~~~~~~~--~~~~~a~~~~~~~~~~~kvvi~ 349 (350)
T cd08274 303 EVFRRLVRYIEEGEI--RPVVAKTFPL--SEIREAQAEFLEKRHVGKLVLV 349 (350)
T ss_pred HHHHHHHHHHHCCCc--ccccccccCH--HHHHHHHHHHhcCCCceEEEEe
Confidence 678899999999998 4456678888 9999999999999889999986
No 84
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=100.00 E-value=5e-37 Score=261.43 Aligned_cols=294 Identities=18% Similarity=0.168 Sum_probs=239.4
Q ss_pred eCCceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeC--CCCCCCCC
Q 017793 22 GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVG--SEVKSLEV 99 (366)
Q Consensus 22 ~~~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG--~~v~~~~~ 99 (366)
.+++++++++++|+|++||||+|+.|.+++|.-..-++ . ....-+|+-+|...+|.++... |+.++|++
T Consensus 23 ~~d~F~lee~~vp~p~~GqvLl~~~ylS~DPymRgrm~-----d----~~SY~~P~~lG~~~~gg~V~~Vv~S~~~~f~~ 93 (340)
T COG2130 23 VPDDFRLEEVDVPEPGEGQVLLRTLYLSLDPYMRGRMS-----D----APSYAPPVELGEVMVGGTVAKVVASNHPGFQP 93 (340)
T ss_pred CCCCceeEeccCCCCCcCceEEEEEEeccCHHHeeccc-----C----CcccCCCcCCCceeECCeeEEEEecCCCCCCC
Confidence 33789999999999999999999999999995543333 1 1123356667766665555433 56788999
Q ss_pred CCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCC---CccccccchhhHHHHHHH
Q 017793 100 GDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNV---SLEEGAMCEPLSVGVHAC 176 (366)
Q Consensus 100 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~---~~~~aa~~~~~~~a~~~l 176 (366)
||.|+. ..+|+||..++.+.+.|++++. ++....+-++..|||.+|
T Consensus 94 GD~V~~-------------------------------~~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gL 142 (340)
T COG2130 94 GDIVVG-------------------------------VSGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGL 142 (340)
T ss_pred CCEEEe-------------------------------cccceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHHH
Confidence 999984 4689999999999999999764 333334557899999998
Q ss_pred -HhCCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCceeeecCCCCcchHHHHHHHHHhh
Q 017793 177 -RRANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-LGADETAKVSTDIEDVDTDVGKIQNAM 253 (366)
Q Consensus 177 -~~~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (366)
+.++.|+|++|+|.| +|++|..+.|+||..|+ +||++..++||.+++++ +|.|.++||.+ +++.+.+++.+
T Consensus 143 l~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~-rVVGiaGg~eK~~~l~~~lGfD~~idyk~--~d~~~~L~~a~--- 216 (340)
T COG2130 143 LDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGC-RVVGIAGGAEKCDFLTEELGFDAGIDYKA--EDFAQALKEAC--- 216 (340)
T ss_pred HHhcCCCCCCEEEEEecccccchHHHHHHHhhCC-eEEEecCCHHHHHHHHHhcCCceeeecCc--ccHHHHHHHHC---
Confidence 459999999999997 79999999999999999 89999999999999988 99999999876 48888887765
Q ss_pred CCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCc--ee-----echHhhhcCcEEEEeecc-------CCChHH
Q 017793 254 GSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEM--TV-----ALTPAAAREVDVIGIFRY-------RSTWPL 319 (366)
Q Consensus 254 ~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~--~~-----~~~~~~~~~~~~~~~~~~-------~~~~~~ 319 (366)
+.|+|+.||++|++ .++..+..|..++|+..+|..+.-. .. .+..++.++.++.|+... .+.+++
T Consensus 217 P~GIDvyfeNVGg~-v~DAv~~~ln~~aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~~~e~~~~ 295 (340)
T COG2130 217 PKGIDVYFENVGGE-VLDAVLPLLNLFARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRFPEALRE 295 (340)
T ss_pred CCCeEEEEEcCCch-HHHHHHHhhccccceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhhhhhHHHHHH
Confidence 79999999999976 9999999999999999999543211 11 122366778999998762 356788
Q ss_pred HHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793 320 CIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 366 (366)
Q Consensus 320 ~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~ 366 (366)
+..|+.+|+++.+. +.+-+| |++++||.-|.+|+.+||+|+++
T Consensus 296 l~~wv~~GKi~~~e--ti~dGl--EnaP~Af~gLl~G~N~GK~vvKv 338 (340)
T COG2130 296 LGGWVKEGKIQYRE--TIVDGL--ENAPEAFIGLLSGKNFGKLVVKV 338 (340)
T ss_pred HHHHHHcCceeeEe--eehhhh--hccHHHHHHHhcCCccceEEEEe
Confidence 99999999997666 344578 99999999999999999999975
No 85
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=100.00 E-value=4.1e-36 Score=276.67 Aligned_cols=325 Identities=28% Similarity=0.429 Sum_probs=266.3
Q ss_pred eEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCCC
Q 017793 16 MAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEV 94 (366)
Q Consensus 16 ~~~~~~~~-~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v 94 (366)
|++++.++ ..+.+++.|.|.+.+++++|++.++++|+.|+....|.. ....+|.++|+|++|+|+++|+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~--------~~~~~p~~~g~e~~G~v~~~g~~~ 72 (330)
T cd08245 1 KAAVVHAAGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDW--------GGSKYPLVPGHEIVGEVVEVGAGV 72 (330)
T ss_pred CeEEEecCCCCceEEeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCC--------CCCCCCcccCccceEEEEEECCCC
Confidence 57788877 689999999999999999999999999999998877321 113457789999999999999999
Q ss_pred CCCCCCCEEEEcCC-cCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhHHH
Q 017793 95 KSLEVGDRVALEPG-ISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVG 172 (366)
Q Consensus 95 ~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~~a 172 (366)
++|++||+|++.+. .+|+.|.+|..+.+++|++..+.+. ...|+|++|+.++.+.++++|+++++++++.+. .+.+|
T Consensus 73 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~l~~~~~ta 151 (330)
T cd08245 73 EGRKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTGY-TTQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITV 151 (330)
T ss_pred cccccCCEEEEccccCCCCCChhhhCcCcccCcCccccCc-ccCCccccEEEEcHHHeEECCCCCCHHHhhhhhhhHHHH
Confidence 99999999987554 5799999999999999998654442 247999999999999999999999999998665 67889
Q ss_pred HHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHh
Q 017793 173 VHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNA 252 (366)
Q Consensus 173 ~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~ 252 (366)
|.+++..+++++++|||+|+|.+|++++++|+..|+ .++++++++++.++++++|++.+++... .+....
T Consensus 152 ~~~l~~~~~~~~~~vlI~g~g~iG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~------- 221 (330)
T cd08245 152 YSALRDAGPRPGERVAVLGIGGLGHLAVQYARAMGF-ETVAITRSPDKRELARKLGADEVVDSGA--ELDEQA------- 221 (330)
T ss_pred HHHHHhhCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhCCcEEeccCC--cchHHh-------
Confidence 988877889999999999988899999999999999 6888888999999999999887766432 222111
Q ss_pred hCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCce-eechHhhhcCcEEEEeecc-CCChHHHHHHHHCCCCC
Q 017793 253 MGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMT-VALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKID 330 (366)
Q Consensus 253 ~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~ 330 (366)
..+++|+++|+++.......++++|+++|+++.++....... .....+..++.++.+.... ...+++++++++++.+.
T Consensus 222 ~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~l~ 301 (330)
T cd08245 222 AAGGADVILVTVVSGAAAEAALGGLRRGGRIVLVGLPESPPFSPDIFPLIMKRQSIAGSTHGGRADLQEALDFAAEGKVK 301 (330)
T ss_pred ccCCCCEEEECCCcHHHHHHHHHhcccCCEEEEECCCCCCccccchHHHHhCCCEEEEeccCCHHHHHHHHHHHHcCCCc
Confidence 135799999998877788999999999999999985432211 1133456677777777654 45788899999999984
Q ss_pred CCCceEEEecCChhhHHHHHHHHHcCCCceEEEe
Q 017793 331 VKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF 364 (366)
Q Consensus 331 ~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi 364 (366)
+ ..+.+++ ++++++++.+.++...||+|+
T Consensus 302 --~-~~~~~~~--~~~~~a~~~~~~~~~~~~~v~ 330 (330)
T cd08245 302 --P-MIETFPL--DQANEAYERMEKGDVRFRFVL 330 (330)
T ss_pred --c-eEEEEcH--HHHHHHHHHHHcCCCCcceeC
Confidence 3 3467888 999999999999999999875
No 86
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=100.00 E-value=2.8e-36 Score=274.52 Aligned_cols=298 Identities=36% Similarity=0.652 Sum_probs=246.1
Q ss_pred ceEEEEeeC--CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCC
Q 017793 15 NMAAWLLGI--KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGS 92 (366)
Q Consensus 15 ~~~~~~~~~--~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~ 92 (366)
|+++++.++ ..++++++|.|++.+++|+||+.++++|++|+....|.+ .....|.++|+|++|+|+++|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~--------~~~~~p~~~G~e~~G~V~~vG~ 72 (306)
T cd08258 1 MKALVKTGPGPGNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDY--------DPVETPVVLGHEFSGTIVEVGP 72 (306)
T ss_pred CeeEEEecCCCCceEEeecCCCCCCCCeEEEEEEEEEechhhHHHHcCCC--------CcCCCCeeeccceEEEEEEECC
Confidence 466777644 469999999999999999999999999999998877321 1234578899999999999999
Q ss_pred CCCCCCCCCEEEEcCC-cCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccchhhHH
Q 017793 93 EVKSLEVGDRVALEPG-ISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSV 171 (366)
Q Consensus 93 ~v~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~~~~~ 171 (366)
+++.|++||+|++.+. .+|+.|.+|..+..+.|+...+++. ...|+|+||+.++.+.++++|+++++++++...++.+
T Consensus 73 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ 151 (306)
T cd08258 73 DVEGWKVGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIGT-QADGGFAEYVLVPEESLHELPENLSLEAAALTEPLAV 151 (306)
T ss_pred CcCcCCCCCEEEEccCcCCCCCCcchhCcCcccCCCCceeee-cCCCceEEEEEcchHHeEECcCCCCHHHHHhhchHHH
Confidence 9999999999999775 6899999999999999987554432 3479999999999999999999999998885568888
Q ss_pred HHHHH-HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEE--cCChhHHHHHHHcCCceeeecCCCCcchHHHHHH
Q 017793 172 GVHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIIT--DVDVQRLSIARNLGADETAKVSTDIEDVDTDVGK 248 (366)
Q Consensus 172 a~~~l-~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v--~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~ 248 (366)
||+++ ...+++++++|||.|+|.+|++++|+|+..|++ ++++ ++++++.++++++|++.+ ++ ...++...+..
T Consensus 152 a~~~l~~~~~~~~g~~vlI~g~g~~g~~~~~la~~~G~~-v~~~~~~~~~~~~~~~~~~g~~~~-~~--~~~~~~~~l~~ 227 (306)
T cd08258 152 AVHAVAERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGAT-VVVVGTEKDEVRLDVAKELGADAV-NG--GEEDLAELVNE 227 (306)
T ss_pred HHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCE-EEEECCCCCHHHHHHHHHhCCccc-CC--CcCCHHHHHHH
Confidence 99887 457889999999988899999999999999994 6555 345568888899999776 54 33566666655
Q ss_pred HHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccC-CCceeechHhhhcCcEEEEeecc-CCChHHHHHHHHC
Q 017793 249 IQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK-TEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRS 326 (366)
Q Consensus 249 ~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~ 326 (366)
+. .+.++|++||++|....+...+++|+++|+++.+|... ....++...++++++++.|++.+ .++++++++++++
T Consensus 228 ~~--~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~ 305 (306)
T cd08258 228 IT--DGDGADVVIECSGAVPALEQALELLRKGGRIVQVGIFGPLAASIDVERIIQKELSVIGSRSSTPASWETALRLLAS 305 (306)
T ss_pred Hc--CCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCCCCcccCHHHHhhcCcEEEEEecCchHhHHHHHHHHhc
Confidence 43 35689999999987778899999999999999998765 23444556677899999999987 7789999999987
Q ss_pred C
Q 017793 327 G 327 (366)
Q Consensus 327 g 327 (366)
|
T Consensus 306 ~ 306 (306)
T cd08258 306 G 306 (306)
T ss_pred C
Confidence 5
No 87
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=3e-35 Score=268.68 Aligned_cols=300 Identities=30% Similarity=0.455 Sum_probs=242.3
Q ss_pred eCCceEEEEecCCCCCCCcEEEEEeeeeeccchhhhh-hhcccccccccCccCCCCcccccceeEEEEEeCCCCCCCCCC
Q 017793 22 GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHF-KVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVG 100 (366)
Q Consensus 22 ~~~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~-~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 100 (366)
+++.++++++|.|++.++||+||+.++++|+.|+... .|.... .....|.++|+|++|+|+++|++++++++|
T Consensus 3 ~~~~~~~~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~------~~~~~~~~~g~e~~G~V~~vG~~v~~~~~G 76 (312)
T cd08269 3 GPGRFEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWF------VYPAEPGGPGHEGWGRVVALGPGVRGLAVG 76 (312)
T ss_pred CCCeeEEEECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCc------ccCCCCcccceeeEEEEEEECCCCcCCCCC
Confidence 4567999999999999999999999999999999876 532100 012247899999999999999999999999
Q ss_pred CEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccc-hhhHHHHHHHHhC
Q 017793 101 DRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACRRA 179 (366)
Q Consensus 101 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~-~~~~~a~~~l~~~ 179 (366)
|+|++. ..|+|++|+.++.+.++++|+++ ..++.. .++.+++++++..
T Consensus 77 d~V~~~-----------------------------~~g~~~~~~~v~~~~~~~lP~~~--~~~~~~~~~~~~a~~~~~~~ 125 (312)
T cd08269 77 DRVAGL-----------------------------SGGAFAEYDLADADHAVPLPSLL--DGQAFPGEPLGCALNVFRRG 125 (312)
T ss_pred CEEEEe-----------------------------cCCcceeeEEEchhheEECCCch--hhhHHhhhhHHHHHHHHHhc
Confidence 999863 25899999999999999999998 233333 5778888888888
Q ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcE
Q 017793 180 NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDV 259 (366)
Q Consensus 180 ~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 259 (366)
++++++++||+|+|.+|++++|+|+..|++.++++.+++++.++++++|++.+++. ...++...+.++. .+.++|+
T Consensus 126 ~~~~~~~vlI~g~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~l~~~~--~~~~vd~ 201 (312)
T cd08269 126 WIRAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVVTD--DSEAIVERVRELT--GGAGADV 201 (312)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEecC--CCcCHHHHHHHHc--CCCCCCE
Confidence 89999999999989999999999999999548888888889999999999877653 3356666665543 3568999
Q ss_pred EEEcCCChHHHHHHHHhhcCCceEEEEcccCC-CceeechHhhhcCcEEEEeecc-----CCChHHHHHHHHCCCCCCCC
Q 017793 260 SFDCVGFDKTMSTALNATRPGGKVCLIGLAKT-EMTVALTPAAAREVDVIGIFRY-----RSTWPLCIEFLRSGKIDVKP 333 (366)
Q Consensus 260 vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~g~~~~~~ 333 (366)
++||+|+.......+++|+++|+++.+|.... ...+....+.+++.++.++... .+.+++++++++++.+.+..
T Consensus 202 vld~~g~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 281 (312)
T cd08269 202 VIEAVGHQWPLDLAGELVAERGRLVIFGYHQDGPRPVPFQTWNWKGIDLINAVERDPRIGLEGMREAVKLIADGRLDLGS 281 (312)
T ss_pred EEECCCCHHHHHHHHHHhccCCEEEEEccCCCCCcccCHHHHhhcCCEEEEecccCccchhhHHHHHHHHHHcCCCCchh
Confidence 99999887788999999999999999985432 2233334567788887776543 35788999999999985443
Q ss_pred ceEEEecCChhhHHHHHHHHHcCCC-ceEEEe
Q 017793 334 LITHRFGFTQKEIEDAFEISAQGGN-AIKVMF 364 (366)
Q Consensus 334 ~~~~~~~l~~~~~~~a~~~~~~~~~-~gkvvi 364 (366)
.+.+.|++ ++++++++.+.+++. .+|+++
T Consensus 282 ~~~~~~~~--~~~~~a~~~~~~~~~~~~~~~~ 311 (312)
T cd08269 282 LLTHEFPL--EELGDAFEAARRRPDGFIKGVI 311 (312)
T ss_pred heeeeecH--HHHHHHHHHHHhCCCCceEEEe
Confidence 45677888 999999999999855 689886
No 88
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=100.00 E-value=1.5e-35 Score=273.52 Aligned_cols=298 Identities=19% Similarity=0.287 Sum_probs=234.0
Q ss_pred CCceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCCCCCCCCCCE
Q 017793 23 IKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDR 102 (366)
Q Consensus 23 ~~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~ 102 (366)
++.+++.++|.|+|+++||+|||.++++|+.|+.+..|.. ....+|.++|+|++|+|+++|++++.|++||+
T Consensus 14 ~~~~~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~--------~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~ 85 (336)
T TIGR02817 14 PDALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMA--------PEAGQPKILGWDAAGVVVAVGDEVTLFKPGDE 85 (336)
T ss_pred cccceecccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCC--------CCCCCCcccceeeEEEEEEeCCCCCCCCCCCE
Confidence 4578888999999999999999999999999998877321 11345788999999999999999999999999
Q ss_pred EEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhHHHHHHH-HhCC
Q 017793 103 VALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHAC-RRAN 180 (366)
Q Consensus 103 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~~a~~~l-~~~~ 180 (366)
|+... .....|+|++|++++.+.++++|+++++++++.++ ...+||+++ ...+
T Consensus 86 V~~~~-------------------------~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~ 140 (336)
T TIGR02817 86 VWYAG-------------------------DIDRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRLG 140 (336)
T ss_pred EEEcC-------------------------CCCCCCcccceEEEcHHHcccCCCCCCHHHHhhhhHHHHHHHHHHHHhcC
Confidence 98531 01236999999999999999999999999998776 778899988 4577
Q ss_pred CCC-----CCEEEEEC-CCHHHHHHHHHHHHC-CCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhh
Q 017793 181 VGP-----ETNVMIMG-SGPIGLVTLLAARAF-GAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM 253 (366)
Q Consensus 181 ~~~-----~~~vlI~G-~g~vG~~ai~la~~~-g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (366)
+++ +++|||+| +|++|++++|+|+.+ |+ .|+++.+++++.++++++|++.++++.. ++...+.++ .
T Consensus 141 ~~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~-~vi~~~~~~~~~~~l~~~g~~~~~~~~~---~~~~~i~~~---~ 213 (336)
T TIGR02817 141 INDPVAGDKRALLIIGGAGGVGSILIQLARQLTGL-TVIATASRPESQEWVLELGAHHVIDHSK---PLKAQLEKL---G 213 (336)
T ss_pred CCCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCC-EEEEEcCcHHHHHHHHHcCCCEEEECCC---CHHHHHHHh---c
Confidence 776 99999998 699999999999998 98 6888888889999999999998887532 455555542 3
Q ss_pred CCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeecc-------------CCChHHH
Q 017793 254 GSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-------------RSTWPLC 320 (366)
Q Consensus 254 ~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~ 320 (366)
++++|+++|++++.......+++++++|+++.++... .++...+..++..+.+.... ...++++
T Consensus 214 ~~~vd~vl~~~~~~~~~~~~~~~l~~~G~~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (336)
T TIGR02817 214 LEAVSYVFSLTHTDQHFKEIVELLAPQGRFALIDDPA---ELDISPFKRKSISLHWEFMFTRSMFQTADMIEQHHLLNRV 290 (336)
T ss_pred CCCCCEEEEcCCcHHHHHHHHHHhccCCEEEEEcccc---cccchhhhhcceEEEEEEeecccccchhhhhhhHHHHHHH
Confidence 5689999999877678899999999999999875321 22222333343444332110 1347889
Q ss_pred HHHHHCCCCCCCCceEEEec-CChhhHHHHHHHHHcCCCceEEEee
Q 017793 321 IEFLRSGKIDVKPLITHRFG-FTQKEIEDAFEISAQGGNAIKVMFN 365 (366)
Q Consensus 321 ~~~l~~g~~~~~~~~~~~~~-l~~~~~~~a~~~~~~~~~~gkvvi~ 365 (366)
++++.++.+. +.+.+.++ ++.+++++|++.+.+++..||++++
T Consensus 291 ~~l~~~~~l~--~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 334 (336)
T TIGR02817 291 ARLVDAGKIR--TTLAETFGTINAANLKRAHALIESGKARGKIVLE 334 (336)
T ss_pred HHHHHCCCee--ccchhccCCCCHHHHHHHHHHHHcCCccceEEEe
Confidence 9999999884 44444554 2238999999999999999999875
No 89
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=100.00 E-value=1.8e-35 Score=273.57 Aligned_cols=313 Identities=22% Similarity=0.286 Sum_probs=243.3
Q ss_pred ceEEEEeeCCc----eEEEEecCCCCCC-CcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEE
Q 017793 15 NMAAWLLGIKT----LKIQPYHLPTLGP-QDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEE 89 (366)
Q Consensus 15 ~~~~~~~~~~~----~~~~~~~~p~~~~-~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~ 89 (366)
||+.++..++. +.+++.|.|+|.+ ++|+||+.++|+|++|+....|...... ... ...|.++|+|++|+|++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~--~~~-~~~~~~~g~e~~G~V~~ 77 (341)
T cd08290 1 AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKP--PTT-PEPPAVGGNEGVGEVVK 77 (341)
T ss_pred CceEEEccCCCchhheEEeecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCC--ccc-CCCCCCCCcceEEEEEE
Confidence 67888886643 8999999998887 9999999999999999998874321000 000 12577999999999999
Q ss_pred eCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-h
Q 017793 90 VGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-P 168 (366)
Q Consensus 90 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~ 168 (366)
+|++++.|++||+|++.. ...|+|++|+.++.+.++++|+++++++++.+. .
T Consensus 78 vG~~v~~~~~Gd~V~~~~---------------------------~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~ 130 (341)
T cd08290 78 VGSGVKSLKPGDWVIPLR---------------------------PGLGTWRTHAVVPADDLIKVPNDVDPEQAATLSVN 130 (341)
T ss_pred eCCCCCCCCCCCEEEecC---------------------------CCCccchheEeccHHHeEeCCCCCCHHHHHHhhcc
Confidence 999999999999998631 125999999999999999999999999998775 7
Q ss_pred hHHHHHHHHh-CCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCCh----hHHHHHHHcCCceeeecCCC-Ccc
Q 017793 169 LSVGVHACRR-ANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDV----QRLSIARNLGADETAKVSTD-IED 241 (366)
Q Consensus 169 ~~~a~~~l~~-~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~----~~~~~~~~lg~~~~~~~~~~-~~~ 241 (366)
+.+||+++.. ..++++++|||+| +|++|++++|+|+..|++ ++++..++ ++.++++++|++.++++... ..+
T Consensus 131 ~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 209 (341)
T cd08290 131 PCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGIK-TINVVRDRPDLEELKERLKALGADHVLTEEELRSLL 209 (341)
T ss_pred HHHHHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCCe-EEEEEcCCCcchhHHHHHHhcCCCEEEeCccccccc
Confidence 7889998854 7789999999998 599999999999999995 55554444 67888899999988775331 014
Q ss_pred hHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCC-CceeechHhhhcCcEEEEeecc-------
Q 017793 242 VDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT-EMTVALTPAAAREVDVIGIFRY------- 313 (366)
Q Consensus 242 ~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~------- 313 (366)
+...+..+. ++++|++|||+|+. .....+++++++|+++.+|.... ...++....+.++.++.+....
T Consensus 210 ~~~~i~~~~---~~~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (341)
T cd08290 210 ATELLKSAP---GGRPKLALNCVGGK-SATELARLLSPGGTMVTYGGMSGQPVTVPTSLLIFKDITLRGFWLTRWLKRAN 285 (341)
T ss_pred HHHHHHHHc---CCCceEEEECcCcH-hHHHHHHHhCCCCEEEEEeccCCCCcccCHHHHhhCCceEEEEecHHHHhhcC
Confidence 555554432 23899999999976 56778899999999999985432 2233333456777888876543
Q ss_pred ----CCChHHHHHHHHCCCCCCCCceEEEe---cCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793 314 ----RSTWPLCIEFLRSGKIDVKPLITHRF---GFTQKEIEDAFEISAQGGNAIKVMFNL 366 (366)
Q Consensus 314 ----~~~~~~~~~~l~~g~~~~~~~~~~~~---~l~~~~~~~a~~~~~~~~~~gkvvi~~ 366 (366)
...++++++++.++.+.+ .....+ ++ ++++++++.+.++...||+|+++
T Consensus 286 ~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~--~~~~~a~~~~~~~~~~~k~v~~~ 341 (341)
T cd08290 286 PEEKEDMLEELAELIREGKLKA--PPVEKVTDDPL--EEFKDALANALKGGGGGKQVLVM 341 (341)
T ss_pred HHHHHHHHHHHHHHHHcCCccC--CcccccccCCH--HHHHHHHHHHhhcCCCCeEEEeC
Confidence 124778899999999843 344455 77 99999999999999999999875
No 90
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=100.00 E-value=6.9e-35 Score=267.73 Aligned_cols=311 Identities=23% Similarity=0.302 Sum_probs=246.9
Q ss_pred ceEEEEeeC---CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeC
Q 017793 15 NMAAWLLGI---KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVG 91 (366)
Q Consensus 15 ~~~~~~~~~---~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG 91 (366)
||++++..+ ..+++.+.+.|.+.+++|+|++.++++|++|+....|... .......|.++|+|++|+|+++|
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~-----~~~~~~~p~~~g~e~~G~v~~~G 75 (324)
T cd08244 1 MRAIRLHEFGPPEVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGP-----GPFPPELPYVPGGEVAGVVDAVG 75 (324)
T ss_pred CeEEEEcCCCCccceEEeccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCC-----CCCCCCCCcCCccceEEEEEEeC
Confidence 567777643 4577778888888999999999999999999988774321 11123457889999999999999
Q ss_pred CCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhH
Q 017793 92 SEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLS 170 (366)
Q Consensus 92 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~ 170 (366)
++++++++||+|++... ...|+|++|+.++.+.++++|+++++++++.+. .+.
T Consensus 76 ~~v~~~~~Gd~V~~~~~--------------------------~~~g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~~~~ 129 (324)
T cd08244 76 PGVDPAWLGRRVVAHTG--------------------------RAGGGYAELAVADVDSLHPVPDGLDLEAAVAVVHDGR 129 (324)
T ss_pred CCCCCCCCCCEEEEccC--------------------------CCCceeeEEEEEchHHeEeCCCCCCHHHHhhhcchHH
Confidence 99999999999986421 137899999999999999999999999988765 677
Q ss_pred HHHHHHHhCCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHH
Q 017793 171 VGVHACRRANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKI 249 (366)
Q Consensus 171 ~a~~~l~~~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~ 249 (366)
+||..++..++++++++||+| +|++|++++++|+..|+ .++++++++++.+.++++|++.++++. ..++...+.+.
T Consensus 130 ta~~~~~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~ 206 (324)
T cd08244 130 TALGLLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGA-TVVGAAGGPAKTALVRALGADVAVDYT--RPDWPDQVREA 206 (324)
T ss_pred HHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEEecC--CccHHHHHHHH
Confidence 776555778899999999998 69999999999999999 688888889999999999998776643 34555555443
Q ss_pred HHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCc-eeechHhhhcCcEEEEeecc-------CCChHHHH
Q 017793 250 QNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEM-TVALTPAAAREVDVIGIFRY-------RSTWPLCI 321 (366)
Q Consensus 250 ~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~ 321 (366)
. .++++|+++|++|+. ....++++++++|+++.+|...... .++....+.++.++.+.... .+.+++++
T Consensus 207 ~--~~~~~d~vl~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (324)
T cd08244 207 L--GGGGVTVVLDGVGGA-IGRAALALLAPGGRFLTYGWASGEWTALDEDDARRRGVTVVGLLGVQAERGGLRALEARAL 283 (324)
T ss_pred c--CCCCceEEEECCChH-hHHHHHHHhccCcEEEEEecCCCCCCccCHHHHhhCCcEEEEeecccCCHHHHHHHHHHHH
Confidence 2 356899999999976 5688999999999999998654322 22323445677777766543 24577788
Q ss_pred HHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793 322 EFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 366 (366)
Q Consensus 322 ~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~ 366 (366)
+++.++.+ .+.+.+.|++ +++++|++.+.++...||++++.
T Consensus 284 ~~l~~~~l--~~~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~~~ 324 (324)
T cd08244 284 AEAAAGRL--VPVVGQTFPL--ERAAEAHAALEARSTVGKVLLLP 324 (324)
T ss_pred HHHHCCCc--cCccceEEeH--HHHHHHHHHHHcCCCCceEEEeC
Confidence 99999988 4456678888 99999999999999999999864
No 91
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=1.2e-35 Score=269.73 Aligned_cols=299 Identities=27% Similarity=0.393 Sum_probs=225.0
Q ss_pred ceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEE---EEEeC-CCCCCCCCC
Q 017793 25 TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGI---IEEVG-SEVKSLEVG 100 (366)
Q Consensus 25 ~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~---V~~vG-~~v~~~~~G 100 (366)
....++.|+|.|.+++++|++.++++||.|+.+..|...... ....+|.+.+.++.|. +...| ..+..+..|
T Consensus 19 ~~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~----~~~~~p~ii~~~g~~~~~~~~~~g~~~~~~~~~g 94 (347)
T KOG1198|consen 19 VLFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIP----LGREFPGIIGRDGSGVVGAVESVGDDVVGGWVHG 94 (347)
T ss_pred eEEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCC----CccCCCCccccccCCceeEEeccccccccceEee
Confidence 345568999999999999999999999999999996654432 1235676666555555 33444 233446667
Q ss_pred CEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhHHHHHHHHh-
Q 017793 101 DRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACRR- 178 (366)
Q Consensus 101 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~~a~~~l~~- 178 (366)
|++.. ....|+|+||+.+++..++++|+++++.+||.++ ...+||.++..
T Consensus 95 ~~~~~----------------------------~~~~g~~aey~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~~al~~~ 146 (347)
T KOG1198|consen 95 DAVVA----------------------------FLSSGGLAEYVVVPEKLLVKIPESLSFEEAAALPLAALTALSALFQL 146 (347)
T ss_pred eEEee----------------------------ccCCCceeeEEEcchhhccCCCCccChhhhhcCchHHHHHHHHHHhc
Confidence 66653 2468999999999999999999999999999887 88899999854
Q ss_pred C------CCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHH
Q 017793 179 A------NVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN 251 (366)
Q Consensus 179 ~------~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~ 251 (366)
. ++++|++|||+| +|++|++|+|+|+..|+ ..+++.+++++.++++++|++.+++|++ +++.+.+++.
T Consensus 147 ~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~-~~v~t~~s~e~~~l~k~lGAd~vvdy~~--~~~~e~~kk~-- 221 (347)
T KOG1198|consen 147 APGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGA-IKVVTACSKEKLELVKKLGADEVVDYKD--ENVVELIKKY-- 221 (347)
T ss_pred cccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCC-cEEEEEcccchHHHHHHcCCcEeecCCC--HHHHHHHHhh--
Confidence 6 699999999997 78999999999999996 3455558999999999999999999866 5666655443
Q ss_pred hhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccC---CCceee--chHhh--------hcCcEEE--EeeccCCC
Q 017793 252 AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK---TEMTVA--LTPAA--------AREVDVI--GIFRYRST 316 (366)
Q Consensus 252 ~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~---~~~~~~--~~~~~--------~~~~~~~--~~~~~~~~ 316 (366)
++.+||+||||+|+. .......++..+|+...++... ...... +..+. .+..... .+....+.
T Consensus 222 -~~~~~DvVlD~vg~~-~~~~~~~~l~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (347)
T KOG1198|consen 222 -TGKGVDVVLDCVGGS-TLTKSLSCLLKGGGGAYIGLVGDELANYKLDDLWQSANGIKLYSLGLKGVNYRWLYFVPSAEY 299 (347)
T ss_pred -cCCCccEEEECCCCC-ccccchhhhccCCceEEEEeccccccccccccchhhhhhhhheeeeeeccceeeeeecCCHHH
Confidence 278999999999986 5666777888777644444222 111111 00000 0011111 11111567
Q ss_pred hHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793 317 WPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 366 (366)
Q Consensus 317 ~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~ 366 (366)
++.+.++++++++ ++.+.+.|++ +++.+|++.+.++...||+++.+
T Consensus 300 l~~l~~~ie~gki--kp~i~~~~p~--~~~~ea~~~~~~~~~~GK~vl~~ 345 (347)
T KOG1198|consen 300 LKALVELIEKGKI--KPVIDSVYPF--SQAKEAFEKLEKSHATGKVVLEK 345 (347)
T ss_pred HHHHHHHHHcCcc--cCCcceeeeH--HHHHHHHHHHhhcCCcceEEEEe
Confidence 8899999999988 8888999999 99999999999999999999864
No 92
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=100.00 E-value=2e-34 Score=265.75 Aligned_cols=308 Identities=23% Similarity=0.328 Sum_probs=244.5
Q ss_pred cceEEEEeeCC---ceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEe
Q 017793 14 QNMAAWLLGIK---TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEV 90 (366)
Q Consensus 14 ~~~~~~~~~~~---~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~v 90 (366)
+||++++.+++ .+++++.+.|.+.++|++|||.++++|+.|+....|.. ......|.++|+|++|+|+++
T Consensus 1 ~m~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~-------~~~~~~~~~~g~e~~G~v~~v 73 (334)
T PTZ00354 1 MMRAVTLKGFGGVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKY-------PPPPGSSEILGLEVAGYVEDV 73 (334)
T ss_pred CcEEEEEEecCCCcceEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCC-------CCCCCCCcccceeeEEEEEEe
Confidence 58888888663 57778888888999999999999999999998877321 011234578999999999999
Q ss_pred CCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hh
Q 017793 91 GSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PL 169 (366)
Q Consensus 91 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~ 169 (366)
|++++++++||+|+.. ..+|+|++|++++.+.++++|+++++++++.+. .+
T Consensus 74 G~~v~~~~~Gd~V~~~----------------------------~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~ 125 (334)
T PTZ00354 74 GSDVKRFKEGDRVMAL----------------------------LPGGGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAF 125 (334)
T ss_pred CCCCCCCCCCCEEEEe----------------------------cCCCceeeEEEecHHHcEeCCCCCCHHHHHHHHHHH
Confidence 9999999999999853 135899999999999999999999998887664 77
Q ss_pred HHHHHHHHh-CCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcc-hHHHH
Q 017793 170 SVGVHACRR-ANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIED-VDTDV 246 (366)
Q Consensus 170 ~~a~~~l~~-~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~-~~~~~ 246 (366)
.+|++++.. .+++++++|||+| +|++|++++++|+..|+. ++.+.+++++.++++++|++.+++... .+ +...+
T Consensus 126 ~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~ 202 (334)
T PTZ00354 126 LTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGAA-TIITTSSEEKVDFCKKLAAIILIRYPD--EEGFAPKV 202 (334)
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHcCCcEEEecCC--hhHHHHHH
Confidence 889998854 7899999999998 699999999999999994 555778889999999999987776432 22 55555
Q ss_pred HHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCc-e-eechHhhhcCcEEEEeeccC----------
Q 017793 247 GKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEM-T-VALTPAAAREVDVIGIFRYR---------- 314 (366)
Q Consensus 247 ~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~-~~~~~~~~~~~~~~~~~~~~---------- 314 (366)
.+.. .+.++|++||++++ ..+..+++++.++|+++.++...... . +....+..+..++.++....
T Consensus 203 ~~~~--~~~~~d~~i~~~~~-~~~~~~~~~l~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (334)
T PTZ00354 203 KKLT--GEKGVNLVLDCVGG-SYLSETAEVLAVDGKWIVYGFMGGAKVEKFNLLPLLRKRASIIFSTLRSRSDEYKADLV 279 (334)
T ss_pred HHHh--CCCCceEEEECCch-HHHHHHHHHhccCCeEEEEecCCCCcccccCHHHHHhhCCEEEeeeccccchhhhHHHH
Confidence 5443 25689999999985 48889999999999999998543321 1 44444555666777754331
Q ss_pred -CChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793 315 -STWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 366 (366)
Q Consensus 315 -~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~ 366 (366)
+.+++++++++++.+ .+.+.+.+++ ++++++++.+.++...||+++++
T Consensus 280 ~~~~~~~~~~~~~~~l--~~~~~~~~~~--~~~~~~~~~~~~~~~~~kvvv~~ 328 (334)
T PTZ00354 280 ASFEREVLPYMEEGEI--KPIVDRTYPL--EEVAEAHTFLEQNKNIGKVVLTV 328 (334)
T ss_pred HHHHHHHHHHHHCCCc--cCccccEEcH--HHHHHHHHHHHhCCCCceEEEec
Confidence 224678889999988 4446677888 99999999999988889999864
No 93
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.9e-34 Score=262.62 Aligned_cols=293 Identities=23% Similarity=0.294 Sum_probs=237.3
Q ss_pred ceEEEEee--CCceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCC
Q 017793 15 NMAAWLLG--IKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGS 92 (366)
Q Consensus 15 ~~~~~~~~--~~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~ 92 (366)
||+.++.+ |..+++++.|.|.++++||+||+.++++|+.|+.... ....|.++|+|++|+|+++|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~------------~~~~~~~~g~e~~G~v~~~G~ 68 (305)
T cd08270 1 MRALVVDPDAPLRLRLGEVPDPQPAPHEALVRVAAISLNRGELKFAA------------ERPDGAVPGWDAAGVVERAAA 68 (305)
T ss_pred CeEEEEccCCCceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHhhc------------cCCCCCcccceeEEEEEEeCC
Confidence 45666664 4577888999999999999999999999999997654 112367899999999999999
Q ss_pred CCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhHH
Q 017793 93 EVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSV 171 (366)
Q Consensus 93 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~~ 171 (366)
+++.|++||+|+.. ...|+|++|+.++.+.++++|+++++++++.+. .+.+
T Consensus 69 ~v~~~~~Gd~V~~~----------------------------~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~t 120 (305)
T cd08270 69 DGSGPAVGARVVGL----------------------------GAMGAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVT 120 (305)
T ss_pred CCCCCCCCCEEEEe----------------------------cCCcceeeEEEEchHHeEECCCCCCHHHHHHhHhHHHH
Confidence 99999999999853 136999999999999999999999999988776 7789
Q ss_pred HHHHHHhCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHH
Q 017793 172 GVHACRRANVGPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQ 250 (366)
Q Consensus 172 a~~~l~~~~~~~~~~vlI~G~-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~ 250 (366)
||+++......++++++|+|+ |++|++++++|+..|+ .++.+++++++.+.++++|++..++... ++.
T Consensus 121 a~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~----------~~~ 189 (305)
T cd08270 121 ALRALRRGGPLLGRRVLVTGASGGVGRFAVQLAALAGA-HVVAVVGSPARAEGLRELGAAEVVVGGS----------ELS 189 (305)
T ss_pred HHHHHHHhCCCCCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEeccc----------ccc
Confidence 999986644456999999985 9999999999999999 6888888899999999999876543211 111
Q ss_pred HhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCC-ceeechHhhh--cCcEEEEeecc-----CCChHHHHH
Q 017793 251 NAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE-MTVALTPAAA--REVDVIGIFRY-----RSTWPLCIE 322 (366)
Q Consensus 251 ~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~--~~~~~~~~~~~-----~~~~~~~~~ 322 (366)
++++|+++|++|+. ....++++|+.+|+++.+|..... ...+...+.. ++.++.+.+.. .+.++.+++
T Consensus 190 ---~~~~d~vl~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (305)
T cd08270 190 ---GAPVDLVVDSVGGP-QLARALELLAPGGTVVSVGSSSGEPAVFNPAAFVGGGGGRRLYTFFLYDGEPLAADLARLLG 265 (305)
T ss_pred ---CCCceEEEECCCcH-HHHHHHHHhcCCCEEEEEeccCCCcccccHHHHhcccccceEEEEEccCHHHHHHHHHHHHH
Confidence 35799999999976 788899999999999999865422 2233333333 46777766543 346788999
Q ss_pred HHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793 323 FLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 366 (366)
Q Consensus 323 ~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~ 366 (366)
+++++++. +.+.+.+++ ++++++++.+.++...||+++++
T Consensus 266 ~~~~~~i~--~~~~~~~~~--~~~~~a~~~~~~~~~~gkvvi~~ 305 (305)
T cd08270 266 LVAAGRLD--PRIGWRGSW--TEIDEAAEALLARRFRGKAVLDV 305 (305)
T ss_pred HHHCCCcc--ceeccEEcH--HHHHHHHHHHHcCCCCceEEEeC
Confidence 99999994 446678888 99999999999999999999875
No 94
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=100.00 E-value=8e-35 Score=268.92 Aligned_cols=311 Identities=27% Similarity=0.391 Sum_probs=240.0
Q ss_pred ceEEEEeeC--CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCC
Q 017793 15 NMAAWLLGI--KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGS 92 (366)
Q Consensus 15 ~~~~~~~~~--~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~ 92 (366)
|+++++.++ ..++++++|.|.|+++||+||+.++++|++|+....+. .....|.++|+|++|+|+.+|+
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~---------~~~~~~~~~g~e~~G~v~~vG~ 71 (339)
T cd08249 1 QKAAVLTGPGGGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYG---------FIPSYPAILGCDFAGTVVEVGS 71 (339)
T ss_pred CceEEeccCCCCcccccCCCCCCCCCCEEEEEEEEEEcCchheeeeecc---------cccCCCceeeeeeeEEEEEeCC
Confidence 578888877 78899999999999999999999999999999876521 1123577899999999999999
Q ss_pred CCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhHH
Q 017793 93 EVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSV 171 (366)
Q Consensus 93 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~~ 171 (366)
+++.|++||+|+..+...++ ....+|+|++|+.++.+.++++|+++++++++.+. .+.+
T Consensus 72 ~v~~~~~Gd~V~~~~~~~~~--------------------~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~t 131 (339)
T cd08249 72 GVTRFKVGDRVAGFVHGGNP--------------------NDPRNGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVT 131 (339)
T ss_pred CcCcCCCCCEEEEEeccccC--------------------CCCCCCcccceEEechhheEECCCCCCHHHceecchHHHH
Confidence 99999999999976432211 11247999999999999999999999999998776 7889
Q ss_pred HHHHHH-hCCC----------CCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCC
Q 017793 172 GVHACR-RANV----------GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDI 239 (366)
Q Consensus 172 a~~~l~-~~~~----------~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~ 239 (366)
||+++. ..++ ++++++||+| +|++|++++++|+..|+ .++++. ++++.++++++|++.++++. .
T Consensus 132 a~~~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~-~v~~~~-~~~~~~~~~~~g~~~v~~~~--~ 207 (339)
T cd08249 132 AALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGY-KVITTA-SPKNFDLVKSLGADAVFDYH--D 207 (339)
T ss_pred HHHHHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCC-eEEEEE-CcccHHHHHhcCCCEEEECC--C
Confidence 999874 3433 7899999999 58999999999999999 566665 56888888999998887753 3
Q ss_pred cchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcC--CceEEEEcccCCCceeechHhhhcCcEEEEeec---c-
Q 017793 240 EDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRP--GGKVCLIGLAKTEMTVALTPAAAREVDVIGIFR---Y- 313 (366)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~--~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~- 313 (366)
.++...+..+ .++++|++||++|++..+..+++++++ +|+++.+|......... ............... .
T Consensus 208 ~~~~~~l~~~---~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~g~~v~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 283 (339)
T cd08249 208 PDVVEDIRAA---TGGKLRYALDCISTPESAQLCAEALGRSGGGKLVSLLPVPEETEPR-KGVKVKFVLGYTVFGEIPED 283 (339)
T ss_pred chHHHHHHHh---cCCCeeEEEEeeccchHHHHHHHHHhccCCCEEEEecCCCccccCC-CCceEEEEEeeeeccccccc
Confidence 5666666544 357799999999975688999999999 99999998654321110 111111111111110 1
Q ss_pred ----CCChHHHHHHHHCCCCCCCCceEEEec--CChhhHHHHHHHHHcCC-CceEEEeeC
Q 017793 314 ----RSTWPLCIEFLRSGKIDVKPLITHRFG--FTQKEIEDAFEISAQGG-NAIKVMFNL 366 (366)
Q Consensus 314 ----~~~~~~~~~~l~~g~~~~~~~~~~~~~--l~~~~~~~a~~~~~~~~-~~gkvvi~~ 366 (366)
...+++++++++++.+.+.+ ...++ + +++++|++.+.+++ ..+|+|+++
T Consensus 284 ~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~--~~~~~a~~~~~~~~~~~~kvvv~~ 339 (339)
T cd08249 284 REFGEVFWKYLPELLEEGKLKPHP--VRVVEGGL--EGVQEGLDLLRKGKVSGEKLVVRL 339 (339)
T ss_pred ccchHHHHHHHHHHHHcCCccCCC--ceecCCcH--HHHHHHHHHHHCCCccceEEEEeC
Confidence 24577799999999995543 34455 6 99999999999998 899999975
No 95
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=100.00 E-value=1.4e-34 Score=266.13 Aligned_cols=309 Identities=24% Similarity=0.269 Sum_probs=240.9
Q ss_pred cceEEEEeeC---CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEe
Q 017793 14 QNMAAWLLGI---KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEV 90 (366)
Q Consensus 14 ~~~~~~~~~~---~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~v 90 (366)
+|++..+.++ ..+.++++|.|.|+++||+||+.++|+|++|+.+..|.+ .....|.++|+|++|+|+.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~--------~~~~~~~~~g~e~~G~v~~v 72 (327)
T PRK10754 1 MAKRIEFHKHGGPEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLY--------PPPSLPSGLGTEAAGVVSKV 72 (327)
T ss_pred CceEEEEeccCChhHeEEeeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCC--------CCCCCCCccCcceEEEEEEe
Confidence 3667777644 578999999999999999999999999999998776321 01235778999999999999
Q ss_pred CCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hh
Q 017793 91 GSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PL 169 (366)
Q Consensus 91 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~ 169 (366)
|++++.+++||+|++. ....|+|++|+.++.+.++++|+++++++++.+. ..
T Consensus 73 G~~v~~~~~Gd~V~~~---------------------------~~~~g~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~~~ 125 (327)
T PRK10754 73 GSGVKHIKVGDRVVYA---------------------------QSALGAYSSVHNVPADKAAILPDAISFEQAAASFLKG 125 (327)
T ss_pred CCCCCCCCCCCEEEEC---------------------------CCCCcceeeEEEcCHHHceeCCCCCCHHHHHHHHHHH
Confidence 9999999999999742 1135899999999999999999999999888664 66
Q ss_pred HHHHHHHH-hCCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHH
Q 017793 170 SVGVHACR-RANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVG 247 (366)
Q Consensus 170 ~~a~~~l~-~~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~ 247 (366)
.+|+.++. .+++++|++++|+| +|.+|++++|+|+.+|+ .+++++.++++.++++++|++.+++. ...++.+.+.
T Consensus 126 ~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~ 202 (327)
T PRK10754 126 LTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGSAQKAQRAKKAGAWQVINY--REENIVERVK 202 (327)
T ss_pred HHHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHCCCCEEEcC--CCCcHHHHHH
Confidence 78888874 47899999999997 79999999999999999 57788888999999999999877664 3356666665
Q ss_pred HHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCC-ceeechHhhhcC------cEEEEeeccC----CC
Q 017793 248 KIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE-MTVALTPAAARE------VDVIGIFRYR----ST 316 (366)
Q Consensus 248 ~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~------~~~~~~~~~~----~~ 316 (366)
++. .++++|++|||+++. .....+++++++|+++.+|..... .......+..+. ..+.+..... ..
T Consensus 203 ~~~--~~~~~d~vl~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (327)
T PRK10754 203 EIT--GGKKVRVVYDSVGKD-TWEASLDCLQRRGLMVSFGNASGPVTGVNLGILNQKGSLYVTRPSLQGYITTREELTEA 279 (327)
T ss_pred HHc--CCCCeEEEEECCcHH-HHHHHHHHhccCCEEEEEccCCCCCCCcCHHHHhccCceEEecceeecccCCHHHHHHH
Confidence 553 357899999999964 778899999999999999855422 112222221111 1122222111 23
Q ss_pred hHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEee
Q 017793 317 WPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 365 (366)
Q Consensus 317 ~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~ 365 (366)
++++++++.+|.+.+.....+.|++ +++.++++.+.+++..+|+|+.
T Consensus 280 ~~~~~~~l~~g~l~~~~~~~~~~~~--~~~~~a~~~~~~~~~~~~~~~~ 326 (327)
T PRK10754 280 SNELFSLIASGVIKVDVAEQQKFPL--KDAQRAHEILESRATQGSSLLI 326 (327)
T ss_pred HHHHHHHHHCCCeeeecccCcEEcH--HHHHHHHHHHHcCCCcceEEEe
Confidence 4568899999998544445678888 9999999999999999999985
No 96
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1e-33 Score=261.13 Aligned_cols=329 Identities=28% Similarity=0.369 Sum_probs=259.4
Q ss_pred ceEEEEe---eCCceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeC
Q 017793 15 NMAAWLL---GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVG 91 (366)
Q Consensus 15 ~~~~~~~---~~~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG 91 (366)
||+.++. ..+.+++++.+.|.++++|++|++.++++|++|+....|... .....|.++|+|++|+|+++|
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-------~~~~~~~~~g~e~~G~v~~~G 73 (336)
T cd08276 1 MKAWRLSGGGGLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYP-------PPVKDPLIPLSDGAGEVVAVG 73 (336)
T ss_pred CeEEEEeccCCCcceEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCC-------CCCCCCcccccceeEEEEEeC
Confidence 5777777 336788888888889999999999999999999988763211 112357889999999999999
Q ss_pred CCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhH
Q 017793 92 SEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLS 170 (366)
Q Consensus 92 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~ 170 (366)
+++++|++||+|++.+...|+.+ ....|..+.+.+ ....|+|++|+.++.+.++++|+++++.+++.+. .+.
T Consensus 74 ~~~~~~~~Gd~V~~~~~~~~~~~------~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~ 146 (336)
T cd08276 74 EGVTRFKVGDRVVPTFFPNWLDG------PPTAEDEASALG-GPIDGVLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGL 146 (336)
T ss_pred CCCcCCCCCCEEEEecccccccc------cccccccccccc-cccCceeeeEEEecHHHeEECCCCCCHHHhhhhhHHHH
Confidence 99999999999998765444333 223343333333 2347899999999999999999999998888775 778
Q ss_pred HHHHHHH-hCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHH
Q 017793 171 VGVHACR-RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKI 249 (366)
Q Consensus 171 ~a~~~l~-~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~ 249 (366)
+||+++. ...+++|++++|+|+|++|++++++|+..|+ .+++++.++++.+.++++|++.+++... ..++...+.++
T Consensus 147 ~a~~~l~~~~~~~~g~~vli~g~g~~g~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~ 224 (336)
T cd08276 147 TAWNALFGLGPLKPGDTVLVQGTGGVSLFALQFAKAAGA-RVIATSSSDEKLERAKALGADHVINYRT-TPDWGEEVLKL 224 (336)
T ss_pred HHHHHHHhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEcCCc-ccCHHHHHHHH
Confidence 8998874 4789999999999989999999999999999 5888888889999999999888776432 14565665544
Q ss_pred HHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCC-ceeechHhhhcCcEEEEeecc-CCChHHHHHHHHCC
Q 017793 250 QNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE-MTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSG 327 (366)
Q Consensus 250 ~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g 327 (366)
. .+.++|+++|+++. .....++++++++|+++.+|..... ........+.++.++.+.... ...+++++++++++
T Consensus 225 ~--~~~~~d~~i~~~~~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 301 (336)
T cd08276 225 T--GGRGVDHVVEVGGP-GTLAQSIKAVAPGGVISLIGFLSGFEAPVLLLPLLTKGATLRGIAVGSRAQFEAMNRAIEAH 301 (336)
T ss_pred c--CCCCCcEEEECCCh-HHHHHHHHhhcCCCEEEEEccCCCCccCcCHHHHhhcceEEEEEecCcHHHHHHHHHHHHcC
Confidence 3 35689999999985 4788999999999999999865432 233444566788888887644 55788899999988
Q ss_pred CCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793 328 KIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 366 (366)
Q Consensus 328 ~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~ 366 (366)
.+. +...+.+++ ++++++++.+.++...+|+++++
T Consensus 302 ~l~--~~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~~~ 336 (336)
T cd08276 302 RIR--PVIDRVFPF--EEAKEAYRYLESGSHFGKVVIRV 336 (336)
T ss_pred Ccc--cccCcEEeH--HHHHHHHHHHHhCCCCceEEEeC
Confidence 873 345577888 99999999999988899999874
No 97
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=5e-34 Score=262.67 Aligned_cols=306 Identities=22% Similarity=0.269 Sum_probs=240.3
Q ss_pred cceEEEEeeC-----CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEE
Q 017793 14 QNMAAWLLGI-----KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIE 88 (366)
Q Consensus 14 ~~~~~~~~~~-----~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~ 88 (366)
.||+.++.++ +++++++.+.|.+.++|++||+.++|+|+.|+....|.+. ....+|.++|+|++|+|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~-------~~~~~p~~~g~e~~G~v~ 73 (329)
T cd08250 1 SFRKLVVHRLSPNFREATSIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYD-------PGVKPPFDCGFEGVGEVV 73 (329)
T ss_pred CceEEEeccCCCCcccCceEEecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCC-------CCCCCCcccCceeEEEEE
Confidence 3788888854 4688999999999999999999999999999988773211 113578899999999999
Q ss_pred EeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccchh
Q 017793 89 EVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEP 168 (366)
Q Consensus 89 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~~ 168 (366)
++|++++.|++||+|++. ..|+|++|+.++.+.++++|++. .+.++....
T Consensus 74 ~vG~~v~~~~~Gd~V~~~-----------------------------~~g~~~s~~~v~~~~~~~ip~~~-~~~a~l~~~ 123 (329)
T cd08250 74 AVGEGVTDFKVGDAVATM-----------------------------SFGAFAEYQVVPARHAVPVPELK-PEVLPLLVS 123 (329)
T ss_pred EECCCCCCCCCCCEEEEe-----------------------------cCcceeEEEEechHHeEECCCCc-chhhhcccH
Confidence 999999999999999853 36899999999999999999973 233334457
Q ss_pred hHHHHHHHH-hCCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHH
Q 017793 169 LSVGVHACR-RANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDV 246 (366)
Q Consensus 169 ~~~a~~~l~-~~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~ 246 (366)
+.+||+++. ..++++++++||+| +|.+|++++|+|+..|+ .++++++++++.+.++++|++.+++.. ..++...+
T Consensus 124 ~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~--~~~~~~~~ 200 (329)
T cd08250 124 GLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGC-HVIGTCSSDEKAEFLKSLGCDRPINYK--TEDLGEVL 200 (329)
T ss_pred HHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHHHHHHcCC-eEEEEeCcHHHHHHHHHcCCceEEeCC--CccHHHHH
Confidence 889999985 47899999999998 69999999999999999 577777888888999999988776643 24454544
Q ss_pred HHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCc---------eee-chHhhhcCcEEEEeecc---
Q 017793 247 GKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEM---------TVA-LTPAAAREVDVIGIFRY--- 313 (366)
Q Consensus 247 ~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~---------~~~-~~~~~~~~~~~~~~~~~--- 313 (366)
... .++++|++||++|+ ......+++++++|+++.+|...... ... ....+.++.++.+....
T Consensus 201 ~~~---~~~~vd~v~~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (329)
T cd08250 201 KKE---YPKGVDVVYESVGG-EMFDTCVDNLALKGRLIVIGFISGYQSGTGPSPVKGATLPPKLLAKSASVRGFFLPHYA 276 (329)
T ss_pred HHh---cCCCCeEEEECCcH-HHHHHHHHHhccCCeEEEEecccCCcccCcccccccccccHHHhhcCceEEEEEhHHHH
Confidence 433 24689999999996 57889999999999999998543210 011 12345566777776432
Q ss_pred ---CCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEee
Q 017793 314 ---RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 365 (366)
Q Consensus 314 ---~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~ 365 (366)
.+.++++++++.++.+.+.....+.+++ +++++|++.+.++...||++++
T Consensus 277 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~a~~~~~~~~~~~kvvv~ 329 (329)
T cd08250 277 KLIPQHLDRLLQLYQRGKLVCEVDPTRFRGL--ESVADAVDYLYSGKNIGKVVVE 329 (329)
T ss_pred HHHHHHHHHHHHHHHCCCeeeeECCccccCH--HHHHHHHHHHHcCCCCceEEeC
Confidence 3457788999999988543334455778 9999999999999888999874
No 98
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=100.00 E-value=3.1e-33 Score=256.86 Aligned_cols=308 Identities=19% Similarity=0.255 Sum_probs=234.3
Q ss_pred ceEEEEeeCC---ceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeC
Q 017793 15 NMAAWLLGIK---TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVG 91 (366)
Q Consensus 15 ~~~~~~~~~~---~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG 91 (366)
|+++++.+++ ++++++.|.|.++++||+||+.++++|++|+....|.+ ......|.++|||++|+|+++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~-------~~~~~~~~~~g~e~~G~v~~~- 72 (325)
T cd05280 1 FKALVVEEQDGGVSLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNG-------GVTRNYPHTPGIDAAGTVVSS- 72 (325)
T ss_pred CceEEEcccCCCCcceEEeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCC-------CCCCCCCCccCcccEEEEEEe-
Confidence 6788888775 79999999999999999999999999999998887431 111345788999999999999
Q ss_pred CCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhH
Q 017793 92 SEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLS 170 (366)
Q Consensus 92 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~ 170 (366)
+++.|++||+|++.+. +.+ ....|+|++|+.++++.++++|+++++++++.+. .+.
T Consensus 73 -~~~~~~~Gd~V~~~~~---------------------~~g-~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ 129 (325)
T cd05280 73 -DDPRFREGDEVLVTGY---------------------DLG-MNTDGGFAEYVRVPADWVVPLPEGLSLREAMILGTAGF 129 (325)
T ss_pred -CCCCCCCCCEEEEccc---------------------ccC-CCCCceeEEEEEEchhhEEECCCCCCHHHHHhhHHHHH
Confidence 4667999999986421 001 1246899999999999999999999999998775 677
Q ss_pred HHHHHHHh---CCCC-CCCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHH
Q 017793 171 VGVHACRR---ANVG-PETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTD 245 (366)
Q Consensus 171 ~a~~~l~~---~~~~-~~~~vlI~G~-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~ 245 (366)
+|+.++.. ..++ .+++|||+|+ |++|++++|+|+.+|+ .|+++++++++.++++++|++.+++... ....
T Consensus 130 ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~----~~~~ 204 (325)
T cd05280 130 TAALSVHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGY-TVVALTGKEEQADYLKSLGASEVLDRED----LLDE 204 (325)
T ss_pred HHHHHHHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEEcchh----HHHH
Confidence 78877743 3345 3579999995 9999999999999999 5888889999999999999988766421 1111
Q ss_pred HHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCC-ceeechHhhhcCcEEEEeecc--C-----CCh
Q 017793 246 VGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE-MTVALTPAAAREVDVIGIFRY--R-----STW 317 (366)
Q Consensus 246 ~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~--~-----~~~ 317 (366)
.... ..++++|++||++++. .+...+++++++|+++.+|..... .......++.++.++.+.... . +.+
T Consensus 205 ~~~~--~~~~~~d~vi~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (325)
T cd05280 205 SKKP--LLKARWAGAIDTVGGD-VLANLLKQTKYGGVVASCGNAAGPELTTTVLPFILRGVSLLGIDSVNCPMELRKQVW 281 (325)
T ss_pred HHHH--hcCCCccEEEECCchH-HHHHHHHhhcCCCEEEEEecCCCCccccccchheeeeeEEEEEEeecCchhHHHHHH
Confidence 1111 2345799999999974 789999999999999999865422 223333344677777775433 1 123
Q ss_pred HHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793 318 PLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 366 (366)
Q Consensus 318 ~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~ 366 (366)
+.+.+++..+.. +.+...|++ ++++++++.+.+++..||+|+++
T Consensus 282 ~~~~~~~~~~~~---~~~~~~~~~--~~~~~a~~~~~~~~~~gk~vv~~ 325 (325)
T cd05280 282 QKLATEWKPDLL---EIVVREISL--EELPEAIDRLLAGKHRGRTVVKI 325 (325)
T ss_pred HHHHHHHhcCCc---cceeeEecH--HHHHHHHHHHhcCCcceEEEEeC
Confidence 344445555533 336678888 99999999999999999999875
No 99
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=100.00 E-value=2.1e-33 Score=257.83 Aligned_cols=306 Identities=20% Similarity=0.274 Sum_probs=232.5
Q ss_pred eEEEEeeC---CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCC
Q 017793 16 MAAWLLGI---KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGS 92 (366)
Q Consensus 16 ~~~~~~~~---~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~ 92 (366)
||+++... ..++++++|.|.++++||+||+.++++|++|+....|... .....|.++|+|++|+|++ +
T Consensus 1 ~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~-------~~~~~~~~~g~e~~G~V~~--~ 71 (323)
T TIGR02823 1 KALVVEKEDGKVSAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGG-------VVRSYPMIPGIDAAGTVVS--S 71 (323)
T ss_pred CeEEEccCCCCcceeEeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCC-------CCCCCCccceeeeEEEEEe--c
Confidence 46666633 4778999999999999999999999999999988774320 1124588899999999998 5
Q ss_pred CCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhHH
Q 017793 93 EVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSV 171 (366)
Q Consensus 93 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~~ 171 (366)
++..|++||+|++.+.. . +....|+|++|+.++.+.++++|+++++++++.+. .+.+
T Consensus 72 ~~~~~~~Gd~V~~~~~~---------------------~-~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~t 129 (323)
T TIGR02823 72 EDPRFREGDEVIVTGYG---------------------L-GVSHDGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFT 129 (323)
T ss_pred CCCCCCCCCEEEEccCC---------------------C-CCCCCccceEEEEEchhheEECCCCCCHHHhhhhhhhHHH
Confidence 67789999999874210 0 01246899999999999999999999999988776 5667
Q ss_pred HHHHH---HhCCCCCCC-EEEEECC-CHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHH
Q 017793 172 GVHAC---RRANVGPET-NVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDV 246 (366)
Q Consensus 172 a~~~l---~~~~~~~~~-~vlI~G~-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~ 246 (366)
|+.++ .++.+++++ +|||+|+ |++|++++|+|+.+|+ .++++..++++.++++++|++.+++... .+ ..+
T Consensus 130 a~~~~~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~--~~--~~~ 204 (323)
T TIGR02823 130 AALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGY-EVVASTGKAEEEDYLKELGASEVIDRED--LS--PPG 204 (323)
T ss_pred HHHHHHHhhhcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHhcCCcEEEcccc--HH--HHH
Confidence 77665 345588998 9999995 9999999999999999 5666667777779999999987766422 11 123
Q ss_pred HHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCC-ceeechHhhhcCcEEEEeecc---C----CChH
Q 017793 247 GKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE-MTVALTPAAAREVDVIGIFRY---R----STWP 318 (366)
Q Consensus 247 ~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~---~----~~~~ 318 (366)
..+ ...++|+++||+|+. .+...+++++++|+++.+|..... .......++.++.++.+.... . ..++
T Consensus 205 ~~~---~~~~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (323)
T TIGR02823 205 KPL---EKERWAGAVDTVGGH-TLANVLAQLKYGGAVAACGLAGGPDLPTTVLPFILRGVSLLGIDSVYCPMALREAAWQ 280 (323)
T ss_pred HHh---cCCCceEEEECccHH-HHHHHHHHhCCCCEEEEEcccCCCCccccHHHHhhcceEEEEEeccccCchhHHHHHH
Confidence 222 234599999999965 688899999999999999865321 222223444677887775432 1 1255
Q ss_pred HHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793 319 LCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 366 (366)
Q Consensus 319 ~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~ 366 (366)
++.+++..+.+ .+. .+.|++ +++++|++.+.+++..||+++++
T Consensus 281 ~~~~~~~~~~~--~~~-~~~~~l--~~~~~a~~~~~~~~~~~k~vv~~ 323 (323)
T TIGR02823 281 RLATDLKPRNL--ESI-TREITL--EELPEALEQILAGQHRGRTVVDV 323 (323)
T ss_pred HHHHHhhcCCC--cCc-eeeecH--HHHHHHHHHHhCCCccceEEEeC
Confidence 56667777777 333 467888 99999999999999999999874
No 100
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=100.00 E-value=1.8e-33 Score=258.25 Aligned_cols=296 Identities=26% Similarity=0.347 Sum_probs=237.4
Q ss_pred ceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCCCCCCCCCCEEE
Q 017793 25 TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVA 104 (366)
Q Consensus 25 ~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~ 104 (366)
.+.+++.|.|.+++++|+||+.++++|+.|+.+..|... .....|.++|+|++|+|+++|++++.+++||+|+
T Consensus 13 ~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~-------~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~ 85 (323)
T cd05282 13 VLELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYG-------SRPPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVL 85 (323)
T ss_pred eEEeEeCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCC-------CCCCCCCcCCcceEEEEEEeCCCCCCCCCCCEEE
Confidence 577888899999999999999999999999988763321 1124578999999999999999999999999998
Q ss_pred EcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhHHHHHHHH-hCCCC
Q 017793 105 LEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACR-RANVG 182 (366)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~~a~~~l~-~~~~~ 182 (366)
+.+ ..|+|++|+.++.+.++++|+++++++++.+. ...+||+++. ...++
T Consensus 86 ~~~----------------------------~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~~ 137 (323)
T cd05282 86 PLG----------------------------GEGTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLP 137 (323)
T ss_pred EeC----------------------------CCCcceeEEecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccCC
Confidence 631 15899999999999999999999998888764 6778888874 46789
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEE
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF 261 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl 261 (366)
++++|||+| +|.+|++++|+|+.+|+ .++++.+++++.+.++++|++.++++.. .++...+.+.. .+.++|++|
T Consensus 138 ~~~~vlI~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~--~~~~~d~vl 212 (323)
T cd05282 138 PGDWVIQNAANSAVGRMLIQLAKLLGF-KTINVVRRDEQVEELKALGADEVIDSSP--EDLAQRVKEAT--GGAGARLAL 212 (323)
T ss_pred CCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecChHHHHHHHhcCCCEEecccc--hhHHHHHHHHh--cCCCceEEE
Confidence 999999998 58999999999999999 5777778888889999999988777532 34555554443 357899999
Q ss_pred EcCCChHHHHHHHHhhcCCceEEEEcccCCC-ceeechHhhhcCcEEEEeecc-----------CCChHHHHHHHHCCCC
Q 017793 262 DCVGFDKTMSTALNATRPGGKVCLIGLAKTE-MTVALTPAAAREVDVIGIFRY-----------RSTWPLCIEFLRSGKI 329 (366)
Q Consensus 262 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~l~~g~~ 329 (366)
||+|+. .....+++++++|+++.+|..... ..++...+..++.++.+.... .+.++++++++.++.+
T Consensus 213 ~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l 291 (323)
T cd05282 213 DAVGGE-SATRLARSLRPGGTLVNYGLLSGEPVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVL 291 (323)
T ss_pred ECCCCH-HHHHHHHhhCCCCEEEEEccCCCCCCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHHHHHHHHHHhCCCc
Confidence 999986 567889999999999999865432 223333344477777776533 1357789999999998
Q ss_pred CCCCceEEEecCChhhHHHHHHHHHcCCCceEEEee
Q 017793 330 DVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 365 (366)
Q Consensus 330 ~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~ 365 (366)
. +...+.|++ ++++++++.+.++...||++++
T Consensus 292 ~--~~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~~ 323 (323)
T cd05282 292 T--TPVGAKFPL--EDFEEAVAAAEQPGRGGKVLLT 323 (323)
T ss_pred c--cCccceecH--HHHHHHHHHHhcCCCCceEeeC
Confidence 4 445678888 9999999999999888999874
No 101
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=100.00 E-value=2.9e-33 Score=257.26 Aligned_cols=310 Identities=17% Similarity=0.222 Sum_probs=232.6
Q ss_pred ceEEEEeeCC---ceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeC
Q 017793 15 NMAAWLLGIK---TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVG 91 (366)
Q Consensus 15 ~~~~~~~~~~---~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG 91 (366)
||+.++++++ .+.+++.|.|.|+++||+||+.++++|++|+....+. +.....+|.++|||++|+|+++|
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~-------~~~~~~~~~~~g~e~~G~V~~~~ 73 (326)
T cd08289 1 FQALVVEKDEDDVSVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPG-------GKIVKRYPFIPGIDLAGTVVESN 73 (326)
T ss_pred CeeEEEeccCCcceeEEEEccCCCCCCCeEEEEEEEEecChHHhhhhcCC-------ccccCCCCcCcccceeEEEEEcC
Confidence 5777887553 4788999999999999999999999999998655411 11123458899999999999954
Q ss_pred CCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhH
Q 017793 92 SEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLS 170 (366)
Q Consensus 92 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~ 170 (366)
++.|++||+|++.+.. + +....|+|+||++++++.++++|+++++++++.+. .+.
T Consensus 74 --~~~~~~Gd~V~~~~~~---------------------~-~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~~~ 129 (326)
T cd08289 74 --DPRFKPGDEVIVTSYD---------------------L-GVSHHGGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGF 129 (326)
T ss_pred --CCCCCCCCEEEEcccc---------------------c-CCCCCCcceeEEEEcHHHeEECCCCCCHHHHhhhhhHHH
Confidence 5779999999875321 0 11247999999999999999999999999998775 566
Q ss_pred HHHHHHH---hCCCC-CCCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHH
Q 017793 171 VGVHACR---RANVG-PETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTD 245 (366)
Q Consensus 171 ~a~~~l~---~~~~~-~~~~vlI~G~-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~ 245 (366)
+|+.++. +..+. .+++|||+|+ |++|++++|+|+..|+ .++++++++++.++++++|++.+++... . ....
T Consensus 130 ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~--~-~~~~ 205 (326)
T cd08289 130 TAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGY-EVVASTGKADAADYLKKLGAKEVIPREE--L-QEES 205 (326)
T ss_pred HHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHHcCCCEEEcchh--H-HHHH
Confidence 7777763 23334 4789999995 9999999999999999 6888888999999999999988776432 1 2233
Q ss_pred HHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCC-ceeechHhhhcCcEEEEeecc---CCChHHHH
Q 017793 246 VGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE-MTVALTPAAAREVDVIGIFRY---RSTWPLCI 321 (366)
Q Consensus 246 ~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 321 (366)
+..+ .++++|++||++|+ .....++++++++|+++.+|..... .+.....++.++.++.+.... .....+++
T Consensus 206 ~~~~---~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (326)
T cd08289 206 IKPL---EKQRWAGAVDPVGG-KTLAYLLSTLQYGGSVAVSGLTGGGEVETTVFPFILRGVNLLGIDSVECPMELRRRIW 281 (326)
T ss_pred HHhh---ccCCcCEEEECCcH-HHHHHHHHHhhcCCEEEEEeecCCCCCCcchhhhhhccceEEEEEeEecCchHHHHHH
Confidence 3332 35679999999997 4788999999999999999865332 222344455778888886432 12233444
Q ss_pred HHHHCCCCC---CCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793 322 EFLRSGKID---VKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 366 (366)
Q Consensus 322 ~~l~~g~~~---~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~ 366 (366)
+.+.+ .+. ..+.+.+.|++ +++.+|++.+.+++..||+++++
T Consensus 282 ~~~~~-~~~~~~~~~~~~~~~~l--~~~~~a~~~~~~~~~~gkvvv~~ 326 (326)
T cd08289 282 RRLAT-DLKPTQLLNEIKQEITL--DELPEALKQILQGRVTGRTVVKL 326 (326)
T ss_pred HHHHh-hcCccccccccceEeeH--HHHHHHHHHHhcCcccceEEEeC
Confidence 44433 221 12345788888 99999999999999999999874
No 102
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=3.6e-33 Score=255.66 Aligned_cols=305 Identities=25% Similarity=0.346 Sum_probs=237.0
Q ss_pred ceEEEEeeC---CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeC
Q 017793 15 NMAAWLLGI---KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVG 91 (366)
Q Consensus 15 ~~~~~~~~~---~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG 91 (366)
|+++++..+ ..+.+.+.+.|.++++||+||++++++|+.|+....|.. .....|.++|+|++|+|+++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~--------~~~~~~~~~g~e~~G~v~~vG 72 (320)
T cd08243 1 MKAIVIEQPGGPEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHS--------PSVKFPRVLGIEAVGEVEEAP 72 (320)
T ss_pred CeEEEEcCCCCccceEEeecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCC--------CCCCCCccccceeEEEEEEec
Confidence 456666544 357777888888899999999999999999998777321 123457889999999999999
Q ss_pred CCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhH
Q 017793 92 SEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLS 170 (366)
Q Consensus 92 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~ 170 (366)
+ ..+++||+|++..... +....|+|++|+.++.+.++++|+++++++++.+. ++.
T Consensus 73 ~--~~~~~Gd~V~~~~~~~----------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ 128 (320)
T cd08243 73 G--GTFTPGQRVATAMGGM----------------------GRTFDGSYAEYTLVPNEQVYAIDSDLSWAELAALPETYY 128 (320)
T ss_pred C--CCCCCCCEEEEecCCC----------------------CCCCCcccceEEEcCHHHcEeCCCCCCHHHHHhcchHHH
Confidence 5 5799999998742110 01246999999999999999999999998887665 888
Q ss_pred HHHHHHHh-CCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHH
Q 017793 171 VGVHACRR-ANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGK 248 (366)
Q Consensus 171 ~a~~~l~~-~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~ 248 (366)
+||+++.. .++++|++|||+| +|++|++++|+|+..|+ .++++..++++.+.++++|++.+++. ..++...+.+
T Consensus 129 ta~~~l~~~~~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~---~~~~~~~i~~ 204 (320)
T cd08243 129 TAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGA-TVTATTRSPERAALLKELGADEVVID---DGAIAEQLRA 204 (320)
T ss_pred HHHHHHHHhcCCCCCCEEEEEcCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEEec---CccHHHHHHH
Confidence 99999854 6789999999998 59999999999999999 58888888999999999999877542 2355555544
Q ss_pred HHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCcee---echHh--hhcCcEEEEeecc---CCChHHH
Q 017793 249 IQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTV---ALTPA--AAREVDVIGIFRY---RSTWPLC 320 (366)
Q Consensus 249 ~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~---~~~~~--~~~~~~~~~~~~~---~~~~~~~ 320 (366)
+ ++++|+++|++|+ ..+...+++++++|+++.+|........ ..... ..++..+.+.... ...++++
T Consensus 205 ~----~~~~d~vl~~~~~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (320)
T cd08243 205 A----PGGFDKVLELVGT-ATLKDSLRHLRPGGIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSSGDVPQTPLQEL 279 (320)
T ss_pred h----CCCceEEEECCCh-HHHHHHHHHhccCCEEEEEccCCCCcccCCcchhhhhhhccceEEEecchhhhhHHHHHHH
Confidence 4 5689999999997 4788999999999999999864322111 11111 1445566555432 2357889
Q ss_pred HHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEe
Q 017793 321 IEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF 364 (366)
Q Consensus 321 ~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi 364 (366)
+++++++.+. +...+.|++ +++++|++.+.++...||+++
T Consensus 280 ~~~~~~~~~~--~~~~~~~~l--~~~~~a~~~~~~~~~~~kvvv 319 (320)
T cd08243 280 FDFVAAGHLD--IPPSKVFTF--DEIVEAHAYMESNRAFGKVVV 319 (320)
T ss_pred HHHHHCCcee--cccccEEcH--HHHHHHHHHHHhCCCCCcEEe
Confidence 9999999884 345677888 999999999999988899886
No 103
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=100.00 E-value=1.3e-32 Score=254.07 Aligned_cols=306 Identities=20% Similarity=0.279 Sum_probs=238.0
Q ss_pred ceEEEEeeCCc------eEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCcc-CCCCcccccceeEEE
Q 017793 15 NMAAWLLGIKT------LKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFI-VKKPMVIGHECAGII 87 (366)
Q Consensus 15 ~~~~~~~~~~~------~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~-~~~p~i~G~e~~G~V 87 (366)
|++.+++++.. ++++++|.|++.+++|+||+.++++|+.|+....+ ..+ ...|.++|+|++|+|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~---------~~~~~~~~~~~g~e~~G~v 71 (336)
T cd08252 1 MKAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAG---------GAPVPGQPKILGWDASGVV 71 (336)
T ss_pred CceEEecCCCCCCcccceeEccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcC---------CCCCCCCCcccccceEEEE
Confidence 46777776632 66678888889999999999999999999987763 211 235678999999999
Q ss_pred EEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch
Q 017793 88 EEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE 167 (366)
Q Consensus 88 ~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~ 167 (366)
+++|++++.|++||+|+.... ....|+|++|+.++.+.++++|+++++++++.+.
T Consensus 72 ~~~G~~v~~~~~Gd~V~~~~~-------------------------~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~ 126 (336)
T cd08252 72 EAVGSEVTLFKVGDEVYYAGD-------------------------ITRPGSNAEYQLVDERIVGHKPKSLSFAEAAALP 126 (336)
T ss_pred EEcCCCCCCCCCCCEEEEcCC-------------------------CCCCccceEEEEEchHHeeeCCCCCCHHHhhhhh
Confidence 999999999999999985310 1136899999999999999999999998888765
Q ss_pred -hhHHHHHHH-HhCCCCC-----CCEEEEEC-CCHHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHHHcCCceeeecCCC
Q 017793 168 -PLSVGVHAC-RRANVGP-----ETNVMIMG-SGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARNLGADETAKVSTD 238 (366)
Q Consensus 168 -~~~~a~~~l-~~~~~~~-----~~~vlI~G-~g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~ 238 (366)
.+.+||+++ +...+.+ +++|+|+| +|++|++++|+|+.+| + .++++++++++.++++++|++.+++..
T Consensus 127 ~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~-~v~~~~~~~~~~~~~~~~g~~~~~~~~-- 203 (336)
T cd08252 127 LTSLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGL-TVIATASRPESIAWVKELGADHVINHH-- 203 (336)
T ss_pred hHHHHHHHHHHHhcCCCCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCc-EEEEEcCChhhHHHHHhcCCcEEEeCC--
Confidence 667788886 4567776 99999998 6999999999999999 7 788888888999999999998877643
Q ss_pred CcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeecc-----
Q 017793 239 IEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY----- 313 (366)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~----- 313 (366)
.++...+... .++++|++||++|+......++++++++|+++.+|... ...+...+..++.++.+....
T Consensus 204 -~~~~~~i~~~---~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (336)
T cd08252 204 -QDLAEQLEAL---GIEPVDYIFCLTDTDQHWDAMAELIAPQGHICLIVDPQ--EPLDLGPLKSKSASFHWEFMFTRSMF 277 (336)
T ss_pred -ccHHHHHHhh---CCCCCCEEEEccCcHHHHHHHHHHhcCCCEEEEecCCC--CcccchhhhcccceEEEEEeeccccc
Confidence 2455555422 34689999999997668899999999999999998543 222333333456665553321
Q ss_pred --------CCChHHHHHHHHCCCCCCCCc-eEEEecCChhhHHHHHHHHHcCCCceEEEee
Q 017793 314 --------RSTWPLCIEFLRSGKIDVKPL-ITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 365 (366)
Q Consensus 314 --------~~~~~~~~~~l~~g~~~~~~~-~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~ 365 (366)
...++++++++.++.+.+... ....+++ ++++++++.+.++...||++++
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~a~~~~~~~~~~~~vv~~ 336 (336)
T cd08252 278 QTPDMIEQHEILNEVADLLDAGKLKTTLTETLGPINA--ENLREAHALLESGKTIGKIVLE 336 (336)
T ss_pred cccchhhHHHHHHHHHHHHHCCCEecceeeeecCCCH--HHHHHHHHHHHcCCccceEEeC
Confidence 123678999999999843211 1234567 9999999999999999999874
No 104
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=100.00 E-value=5.9e-32 Score=247.81 Aligned_cols=312 Identities=29% Similarity=0.402 Sum_probs=244.4
Q ss_pred ceEEEEeeC---CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeC
Q 017793 15 NMAAWLLGI---KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVG 91 (366)
Q Consensus 15 ~~~~~~~~~---~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG 91 (366)
|+++++..+ ..+.++++|.|.+.+++|+|++.++++|++|+....|... .....|+++|+|++|+|+++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~-------~~~~~~~~~g~e~~G~v~~~g 73 (325)
T cd08253 1 MRAIRYHEFGAPDVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYP-------GLPPLPYVPGSDGAGVVEAVG 73 (325)
T ss_pred CceEEEcccCCcccceeeecCCCCCCCCEEEEEEEEEecChhHhhhccCCCC-------CCCCCCeecccceEEEEEeeC
Confidence 456666543 3588889999999999999999999999999987763211 123568899999999999999
Q ss_pred CCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhH
Q 017793 92 SEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLS 170 (366)
Q Consensus 92 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~ 170 (366)
+++++|++||+|++.+... ....|++++|+.++.+.++++|+++++++++.+. ++.
T Consensus 74 ~~~~~~~~Gd~v~~~~~~~-----------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ 130 (325)
T cd08253 74 EGVDGLKVGDRVWLTNLGW-----------------------GRRQGTAAEYVVVPADQLVPLPDGVSFEQGAALGIPAL 130 (325)
T ss_pred CCCCCCCCCCEEEEecccc-----------------------CCCCcceeeEEEecHHHcEeCCCCCCHHHHhhhhhHHH
Confidence 9999999999999753110 0136899999999999999999999999888775 788
Q ss_pred HHHHHHHh-CCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHH
Q 017793 171 VGVHACRR-ANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGK 248 (366)
Q Consensus 171 ~a~~~l~~-~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~ 248 (366)
+|++++.. .+++++++++|+| +|++|++++++++..|+ .++++++++++.+.++++|++.+++.. ..++...+.+
T Consensus 131 ~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~ 207 (325)
T cd08253 131 TAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGA-RVIATASSAEGAELVRQAGADAVFNYR--AEDLADRILA 207 (325)
T ss_pred HHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeCC--CcCHHHHHHH
Confidence 89988854 8899999999998 59999999999999998 688888888999999999988776643 3455555544
Q ss_pred HHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeecc-------CCChHHHH
Q 017793 249 IQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-------RSTWPLCI 321 (366)
Q Consensus 249 ~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~ 321 (366)
+. .++++|++++++++. .....+++++.+|+++.++............++.++.++.+...+ .+.++++.
T Consensus 208 ~~--~~~~~d~vi~~~~~~-~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (325)
T cd08253 208 AT--AGQGVDVIIEVLANV-NLAKDLDVLAPGGRIVVYGSGGLRGTIPINPLMAKEASIRGVLLYTATPEERAAAAEAIA 284 (325)
T ss_pred Hc--CCCceEEEEECCchH-HHHHHHHhhCCCCEEEEEeecCCcCCCChhHHHhcCceEEeeehhhcCHHHHHHHHHHHH
Confidence 43 246899999999975 678888999999999999864422233333345566666655433 22455667
Q ss_pred HHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793 322 EFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 366 (366)
Q Consensus 322 ~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~ 366 (366)
+++.++.+ .+...+.|++ ++++++++.+.++...||+++++
T Consensus 285 ~~~~~~~i--~~~~~~~~~~--~~~~~~~~~~~~~~~~~kvv~~~ 325 (325)
T cd08253 285 AGLADGAL--RPVIAREYPL--EEAAAAHEAVESGGAIGKVVLDP 325 (325)
T ss_pred HHHHCCCc--cCccccEEcH--HHHHHHHHHHHcCCCcceEEEeC
Confidence 78888887 4445677888 99999999999998999999864
No 105
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=5.2e-32 Score=251.38 Aligned_cols=312 Identities=25% Similarity=0.347 Sum_probs=231.7
Q ss_pred ceEEEEeeCC----ceEEEEecCCCC-CCCcEEEEEeeeeeccchhhhhhhccccc---cccc----CccCCCCcccccc
Q 017793 15 NMAAWLLGIK----TLKIQPYHLPTL-GPQDVKVRIKALGICGSDVHHFKVKKLST---MRCA----NFIVKKPMVIGHE 82 (366)
Q Consensus 15 ~~~~~~~~~~----~~~~~~~~~p~~-~~~evlVkv~a~~i~~~D~~~~~~~~~~~---~~~~----~~~~~~p~i~G~e 82 (366)
||++++.++. .+++++.|.|+| +++||+||+.++++|++|+.+..|..... ++.. +.....|.++|+|
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 80 (350)
T cd08248 1 MKAWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRD 80 (350)
T ss_pred CceEEecccCCCcceeeecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecce
Confidence 5666666543 288899999999 59999999999999999998887531100 0000 0124568899999
Q ss_pred eeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccc
Q 017793 83 CAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEE 162 (366)
Q Consensus 83 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~ 162 (366)
++|+|+++|+++++|++||+|++.+.. ...|+|++|+.++.+.++++|+++++++
T Consensus 81 ~~G~v~~vG~~v~~~~~Gd~V~~~~~~-------------------------~~~g~~~~~~~v~~~~~~~lp~~~~~~~ 135 (350)
T cd08248 81 CSGVVVDIGSGVKSFEIGDEVWGAVPP-------------------------WSQGTHAEYVVVPENEVSKKPKNLSHEE 135 (350)
T ss_pred eEEEEEecCCCcccCCCCCEEEEecCC-------------------------CCCccceeEEEecHHHeecCCCCCCHHH
Confidence 999999999999999999999864211 1369999999999999999999999988
Q ss_pred cccch-hhHHHHHHHHh-CCCC----CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeec
Q 017793 163 GAMCE-PLSVGVHACRR-ANVG----PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKV 235 (366)
Q Consensus 163 aa~~~-~~~~a~~~l~~-~~~~----~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~ 235 (366)
++.+. .+.+||+++.. ..++ +|++++|+| +|++|++++++|+.+|+ .++++.++ ++.+.++++|.+.+++.
T Consensus 136 aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~~~~-~~~~~~~~~g~~~~~~~ 213 (350)
T cd08248 136 AASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGA-HVTTTCST-DAIPLVKSLGADDVIDY 213 (350)
T ss_pred HhhchhHHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCc-chHHHHHHhCCceEEEC
Confidence 88775 78889988844 5554 499999998 69999999999999999 56666544 67788899998777664
Q ss_pred CCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCce----e----echHhhhc----
Q 017793 236 STDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMT----V----ALTPAAAR---- 303 (366)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~----~----~~~~~~~~---- 303 (366)
.. .++...+ .. .+++|++||++|+. ....++++++++|+++.+|....... . ....+...
T Consensus 214 ~~--~~~~~~l---~~--~~~vd~vi~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (350)
T cd08248 214 NN--EDFEEEL---TE--RGKFDVILDTVGGD-TEKWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGMLKSAVDLLKKNV 285 (350)
T ss_pred CC--hhHHHHH---Hh--cCCCCEEEECCChH-HHHHHHHHhccCCEEEEecCCcccccccccccchhhhhHHHHHHHHH
Confidence 32 3343333 22 36799999999976 78899999999999999875431110 1 00011111
Q ss_pred -----CcEE-EEee-ccCCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEee
Q 017793 304 -----EVDV-IGIF-RYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 365 (366)
Q Consensus 304 -----~~~~-~~~~-~~~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~ 365 (366)
...+ .+.. .....++++++++.++.+ .+.+++.|++ ++++++++.+.++...+|++++
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~--~~~~~a~~~~~~~~~~~~vv~~ 350 (350)
T cd08248 286 KSLLKGSHYRWGFFSPSGSALDELAKLVEDGKI--KPVIDKVFPF--EEVPEAYEKVESGHARGKTVIK 350 (350)
T ss_pred HHHhcCCCeeEEEECCCHHHHHHHHHHHhCCCE--ecccceeecH--HHHHHHHHHHhcCCCceEEEeC
Confidence 1111 1111 124568899999999988 4446678888 9999999999998888898874
No 106
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=100.00 E-value=9.3e-32 Score=247.03 Aligned_cols=307 Identities=21% Similarity=0.254 Sum_probs=234.3
Q ss_pred ceEEEEeeCC---ceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeC
Q 017793 15 NMAAWLLGIK---TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVG 91 (366)
Q Consensus 15 ~~~~~~~~~~---~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG 91 (366)
||++++.+++ .+++++.|.|+|+++||+||+.++++|++|+....|.. .....+|.++|+|++|+|++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~-------~~~~~~~~~~g~e~~G~V~~-- 71 (324)
T cd08288 1 FKALVLEKDDGGTSAELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKG-------GIVRTFPLVPGIDLAGTVVE-- 71 (324)
T ss_pred CeeEEEeccCCCcceEEEECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCc-------cccCCCCCccccceEEEEEe--
Confidence 5778887664 68899999999999999999999999999998776321 01123578899999999998
Q ss_pred CCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhH
Q 017793 92 SEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLS 170 (366)
Q Consensus 92 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~ 170 (366)
++++++++||+|++.... . .....|+|++|+.++.+.++++|+++++++++.+. .+.
T Consensus 72 ~~~~~~~~Gd~V~~~~~~---------------------~-~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~~~ 129 (324)
T cd08288 72 SSSPRFKPGDRVVLTGWG---------------------V-GERHWGGYAQRARVKADWLVPLPEGLSARQAMAIGTAGF 129 (324)
T ss_pred CCCCCCCCCCEEEECCcc---------------------C-CCCCCCcceeEEEEchHHeeeCCCCCCHHHHhhhhhHHH
Confidence 777889999999864110 0 01136899999999999999999999999888775 566
Q ss_pred HHHHHHH---hCCCC-CCCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHH
Q 017793 171 VGVHACR---RANVG-PETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTD 245 (366)
Q Consensus 171 ~a~~~l~---~~~~~-~~~~vlI~G~-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~ 245 (366)
+++.++. ..... +++++||+|+ |++|++++|+|+.+|+ .++++++++++.++++++|++.++++.. ....
T Consensus 130 ta~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~----~~~~ 204 (324)
T cd08288 130 TAMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGY-EVVASTGRPEEADYLRSLGASEIIDRAE----LSEP 204 (324)
T ss_pred HHHHHHHHHhhcCcCCCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhcCCCEEEEcch----hhHh
Confidence 6665543 44555 5789999995 9999999999999999 5777778889999999999988877532 2223
Q ss_pred HHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCC-CceeechHhhhcCcEEEEeecc-------CCCh
Q 017793 246 VGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT-EMTVALTPAAAREVDVIGIFRY-------RSTW 317 (366)
Q Consensus 246 ~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~ 317 (366)
+..+ ...++|.++|++++. .....+..++.+|+++.+|.... ........++.++.++.+.... .+.+
T Consensus 205 ~~~~---~~~~~~~~~d~~~~~-~~~~~~~~~~~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (324)
T cd08288 205 GRPL---QKERWAGAVDTVGGH-TLANVLAQTRYGGAVAACGLAGGADLPTTVMPFILRGVTLLGIDSVMAPIERRRAAW 280 (324)
T ss_pred hhhh---ccCcccEEEECCcHH-HHHHHHHHhcCCCEEEEEEecCCCCCCcchhhhhccccEEEEEEeecccchhhHHHH
Confidence 3322 244689999999964 56778888999999999886422 1122333344677887776422 2246
Q ss_pred HHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793 318 PLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 366 (366)
Q Consensus 318 ~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~ 366 (366)
+.+.+++.++.+ .+ +.+.+++ ++++++++.+.+++..||+++++
T Consensus 281 ~~~~~~~~~~~~--~~-i~~~~~~--~~~~~a~~~~~~~~~~~~vvv~~ 324 (324)
T cd08288 281 ARLARDLDPALL--EA-LTREIPL--ADVPDAAEAILAGQVRGRVVVDV 324 (324)
T ss_pred HHHHHHHhcCCc--cc-cceeecH--HHHHHHHHHHhcCCccCeEEEeC
Confidence 667778888877 33 3578888 99999999999999999999874
No 107
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=100.00 E-value=6e-32 Score=251.14 Aligned_cols=315 Identities=20% Similarity=0.266 Sum_probs=229.1
Q ss_pred eEEEEeeC-CceEEEEecCCCC---CCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeC
Q 017793 16 MAAWLLGI-KTLKIQPYHLPTL---GPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVG 91 (366)
Q Consensus 16 ~~~~~~~~-~~~~~~~~~~p~~---~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG 91 (366)
+++++.++ ++++++.++.|.| ++++|+||+.++++|++|+....+.. ......|.++|+|++|+|+++|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~-------~~~~~~~~~~g~e~~G~V~~vG 74 (352)
T cd08247 2 KALTFKNNTSPLTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYT-------FHFKVKEKGLGRDYSGVIVKVG 74 (352)
T ss_pred ceEEEecCCCcceeeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhcccc-------cccccCCCccCceeEEEEEEeC
Confidence 46666655 4666766666554 99999999999999999997765211 0011237789999999999999
Q ss_pred CCCC-CCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCC----ceEECCCCCCccccccc
Q 017793 92 SEVK-SLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAK----LCYKLPDNVSLEEGAMC 166 (366)
Q Consensus 92 ~~v~-~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~----~~~~~P~~~~~~~aa~~ 166 (366)
++++ +|++||+|++....++ ...|+|++|++++.+ .++++|+++++++++.+
T Consensus 75 ~~v~~~~~~Gd~V~~~~~~~~-----------------------~~~g~~~~~~~v~~~~~~~~~~~lP~~l~~~~aa~~ 131 (352)
T cd08247 75 SNVASEWKVGDEVCGIYPHPY-----------------------GGQGTLSQYLLVDPKKDKKSITRKPENISLEEAAAW 131 (352)
T ss_pred cccccCCCCCCEEEEeecCCC-----------------------CCCceeeEEEEEccccccceeEECCCCCCHHHHHHh
Confidence 9998 8999999987532211 136899999999988 78999999999999877
Q ss_pred h-hhHHHHHHHHh-C-CCCCCCEEEEECC-CHHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHHHcCCceeeecCCCCc-
Q 017793 167 E-PLSVGVHACRR-A-NVGPETNVMIMGS-GPIGLVTLLAARAFG-APRIIITDVDVQRLSIARNLGADETAKVSTDIE- 240 (366)
Q Consensus 167 ~-~~~~a~~~l~~-~-~~~~~~~vlI~G~-g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~- 240 (366)
+ .+.+||+++.. . ++++|+++||+|+ |++|++++|+|+..| ...++++. ++++.+.++++|++.++++.....
T Consensus 132 ~~~~~ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~-~~~~~~~~~~~g~~~~i~~~~~~~~ 210 (352)
T cd08247 132 PLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTC-SSRSAELNKKLGADHFIDYDAHSGV 210 (352)
T ss_pred HHHHHHHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEe-ChhHHHHHHHhCCCEEEecCCCccc
Confidence 5 67789998865 4 6999999999985 799999999999875 43566665 455566788999988777543210
Q ss_pred chHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhc---CCceEEEEc-ccCCC-ce----------e----echHhh
Q 017793 241 DVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATR---PGGKVCLIG-LAKTE-MT----------V----ALTPAA 301 (366)
Q Consensus 241 ~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~---~~G~~v~~g-~~~~~-~~----------~----~~~~~~ 301 (366)
.+...+.+.. ..++++|++|||+|+......++++++ ++|+++.++ ..... .. . ......
T Consensus 211 ~~~~~~~~~~-~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (352)
T cd08247 211 KLLKPVLENV-KGQGKFDLILDCVGGYDLFPHINSILKPKSKNGHYVTIVGDYKANYKKDTFNSWDNPSANARKLFGSLG 289 (352)
T ss_pred chHHHHHHhh-cCCCCceEEEECCCCHHHHHHHHHHhCccCCCCEEEEEeCCCcccccchhhhhccccchhhhhhhhhhc
Confidence 0322222221 125689999999998667888999999 999999764 22111 00 0 011122
Q ss_pred hcCcEEEEeecc--CCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793 302 AREVDVIGIFRY--RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 366 (366)
Q Consensus 302 ~~~~~~~~~~~~--~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~ 366 (366)
+...++...... .+.++++++++.++.+ .+.+.+.+++ ++++++++.+++++..||+++++
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~~~l--~~~~~a~~~~~~~~~~gkvvi~~ 352 (352)
T cd08247 290 LWSYNYQFFLLDPNADWIEKCAELIADGKV--KPPIDSVYPF--EDYKEAFERLKSNRAKGKVVIKV 352 (352)
T ss_pred CCCcceEEEEecCCHHHHHHHHHHHhCCCe--EeeeccEecH--HHHHHHHHHHHcCCCCCcEEEeC
Confidence 333333332211 2457889999999988 4446678888 99999999999998899999875
No 108
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=100.00 E-value=2.1e-31 Score=243.78 Aligned_cols=305 Identities=27% Similarity=0.371 Sum_probs=241.5
Q ss_pred ceEEEEee---CCceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeC
Q 017793 15 NMAAWLLG---IKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVG 91 (366)
Q Consensus 15 ~~~~~~~~---~~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG 91 (366)
||++++.+ +..+++++.+.|.+.+++++||+.++++|+.|+....|.+ ......|.++|+|++|+|+++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~-------~~~~~~~~~~g~e~~G~v~~vg 73 (323)
T cd05276 1 MKAIVIKEPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLY-------PPPPGASDILGLEVAGVVVAVG 73 (323)
T ss_pred CeEEEEecCCCcccceEEecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCC-------CCCCCCCCcccceeEEEEEeeC
Confidence 57788775 3567888888888899999999999999999998776321 1123457899999999999999
Q ss_pred CCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhH
Q 017793 92 SEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLS 170 (366)
Q Consensus 92 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~ 170 (366)
++++.+++||+|+.. ...|+|++|+.++.+.++++|+++++.+++.+. .+.
T Consensus 74 ~~~~~~~~Gd~V~~~----------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~ 125 (323)
T cd05276 74 PGVTGWKVGDRVCAL----------------------------LAGGGYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFF 125 (323)
T ss_pred CCCCCCCCCCEEEEe----------------------------cCCCceeEEEEcCHHHhccCCCCCCHHHHhhchhHHH
Confidence 999999999999853 135899999999999999999999998887664 788
Q ss_pred HHHHHHH-hCCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHH
Q 017793 171 VGVHACR-RANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGK 248 (366)
Q Consensus 171 ~a~~~l~-~~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~ 248 (366)
++++++. ...++++++++|+| +|++|++++++++..|+ .++++.+++++.+.++++|++.+++.. ..++...+..
T Consensus 126 ~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~ 202 (323)
T cd05276 126 TAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGA-RVIATAGSEEKLEACRALGADVAINYR--TEDFAEEVKE 202 (323)
T ss_pred HHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeCC--chhHHHHHHH
Confidence 8998874 47789999999999 58999999999999999 578888888888888999987766543 2345555544
Q ss_pred HHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCC-ceeechHhhhcCcEEEEeeccC-----------CC
Q 017793 249 IQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE-MTVALTPAAAREVDVIGIFRYR-----------ST 316 (366)
Q Consensus 249 ~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~-----------~~ 316 (366)
.. .+.++|+++|+.|+. .....++++.++|+++.+|..... .......++.++.++.++.... ..
T Consensus 203 ~~--~~~~~d~vi~~~g~~-~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (323)
T cd05276 203 AT--GGRGVDVILDMVGGD-YLARNLRALAPDGRLVLIGLLGGAKAELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAAF 279 (323)
T ss_pred Hh--CCCCeEEEEECCchH-HHHHHHHhhccCCEEEEEecCCCCCCCCchHHHHHhCCeEEEeeccchhhhccHHHHHHH
Confidence 43 256899999999976 577889999999999998754321 2233333445777777765431 23
Q ss_pred hHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEe
Q 017793 317 WPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF 364 (366)
Q Consensus 317 ~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi 364 (366)
++++++++.++++ .+..++.|++ ++++++++.+.++...||+++
T Consensus 280 ~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~ 323 (323)
T cd05276 280 REHVWPLFASGRI--RPVIDKVFPL--EEAAEAHRRMESNEHIGKIVL 323 (323)
T ss_pred HHHHHHHHHCCCc--cCCcceEEcH--HHHHHHHHHHHhCCCcceEeC
Confidence 5678889999988 4446678888 999999999998888889874
No 109
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=100.00 E-value=1.3e-31 Score=246.48 Aligned_cols=292 Identities=20% Similarity=0.195 Sum_probs=227.5
Q ss_pred CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCCCCCCCCCCEE
Q 017793 24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRV 103 (366)
Q Consensus 24 ~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V 103 (366)
+.++++++|.|++++++|+||+.++++|+.|.....+... -..+...+.++|+|++|+|+++|++ .|++||+|
T Consensus 18 ~~~~~~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~-----~~~~~~~~~~~g~e~~G~V~~~G~~--~~~~Gd~V 90 (329)
T cd05288 18 DDFELVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKS-----YSPPVQLGEPMRGGGVGEVVESRSP--DFKVGDLV 90 (329)
T ss_pred cceeEEeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcc-----cCCCccCCCcccCceEEEEEecCCC--CCCCCCEE
Confidence 5689999999999999999999999999988755442110 0011223567899999999999964 79999999
Q ss_pred EEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecC-CceEECCCCCC--cccc-c-cchhhHHHHHHHH-
Q 017793 104 ALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPA-KLCYKLPDNVS--LEEG-A-MCEPLSVGVHACR- 177 (366)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~-~~~~~~P~~~~--~~~a-a-~~~~~~~a~~~l~- 177 (366)
+. .++|++|+.++. +.++++|++++ +.++ + ....+.+||+++.
T Consensus 91 ~~-------------------------------~~~~~~~~~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~ 139 (329)
T cd05288 91 SG-------------------------------FLGWQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTE 139 (329)
T ss_pred ec-------------------------------ccceEEEEEecchhhcEECCcccCCCHHHHHHhcccHHHHHHHHHHh
Confidence 84 358999999999 99999999985 3343 3 3347889999884
Q ss_pred hCCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCceeeecCCCCcchHHHHHHHHHhhCC
Q 017793 178 RANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-LGADETAKVSTDIEDVDTDVGKIQNAMGS 255 (366)
Q Consensus 178 ~~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (366)
...++++++|||+| +|++|++++|+|+..|+ .++++++++++.+.+++ +|++.++++.. .++...+.++. ++
T Consensus 140 ~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~v~~~~---~~ 213 (329)
T cd05288 140 IGKPKPGETVVVSAAAGAVGSVVGQIAKLLGA-RVVGIAGSDEKCRWLVEELGFDAAINYKT--PDLAEALKEAA---PD 213 (329)
T ss_pred ccCCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhhcCCceEEecCC--hhHHHHHHHhc---cC
Confidence 47789999999998 69999999999999999 68888888999999988 99988877543 34555554443 46
Q ss_pred CCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCce------eechHhhhcCcEEEEeecc------CCChHHHHHH
Q 017793 256 GIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMT------VALTPAAAREVDVIGIFRY------RSTWPLCIEF 323 (366)
Q Consensus 256 ~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~------~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~ 323 (366)
++|++|||+|+ ..+..++++++++|+++.+|....... .+....+.++.++.+.... .+.+.+++++
T Consensus 214 ~~d~vi~~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (329)
T cd05288 214 GIDVYFDNVGG-EILDAALTLLNKGGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYADRFPEALAELAKW 292 (329)
T ss_pred CceEEEEcchH-HHHHHHHHhcCCCceEEEEeeccCcccccccccccHHHHhhCcceEEeecchhhHHHHHHHHHHHHHH
Confidence 89999999996 478899999999999999985543211 1233455677777776543 2357788999
Q ss_pred HHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEe
Q 017793 324 LRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF 364 (366)
Q Consensus 324 l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi 364 (366)
+.++.+.+.+ ...+++ +++.++++.+.++...||+++
T Consensus 293 ~~~g~i~~~~--~~~~~l--~~~~~a~~~~~~~~~~gkvvv 329 (329)
T cd05288 293 LAEGKLKYRE--DVVEGL--ENAPEAFLGLFTGKNTGKLVV 329 (329)
T ss_pred HHCCCccccc--cccccH--HHHHHHHHHHhcCCCccceeC
Confidence 9999985443 345778 999999999999888888874
No 110
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=2.6e-31 Score=243.84 Aligned_cols=307 Identities=28% Similarity=0.355 Sum_probs=239.0
Q ss_pred ceEEEEeeCC---ceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeC
Q 017793 15 NMAAWLLGIK---TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVG 91 (366)
Q Consensus 15 ~~~~~~~~~~---~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG 91 (366)
||++++..++ .+++++.+.|.+.+++|+|++.++++|++|+.+..+.. ......|.++|+|++|+|+++|
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~-------~~~~~~~~~~g~e~~G~v~~~G 73 (326)
T cd08272 1 MKALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGA-------AARPPLPAILGCDVAGVVEAVG 73 (326)
T ss_pred CeEEEEccCCCchheEEeecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCC-------CCCCCCCcccccceeEEEEEeC
Confidence 5788887553 48888888888899999999999999999998876321 0113347789999999999999
Q ss_pred CCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhH
Q 017793 92 SEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLS 170 (366)
Q Consensus 92 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~ 170 (366)
+++++|++||+|+..... .....|+|++|+.++.+.++++|+++++.+++.++ .+.
T Consensus 74 ~~~~~~~~Gd~V~~~~~~-----------------------~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~ 130 (326)
T cd08272 74 EGVTRFRVGDEVYGCAGG-----------------------LGGLQGSLAEYAVVDARLLALKPANLSMREAAALPLVGI 130 (326)
T ss_pred CCCCCCCCCCEEEEccCC-----------------------cCCCCCceeEEEEecHHHcccCCCCCCHHHHHHhHHHHH
Confidence 999999999999864210 01136899999999999999999999998888775 677
Q ss_pred HHHHHH-HhCCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHH
Q 017793 171 VGVHAC-RRANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGK 248 (366)
Q Consensus 171 ~a~~~l-~~~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~ 248 (366)
+|++++ +..+++++++++|+| +|++|++++++++..|+ .++++.++ ++.++++++|++.+++.. .. +...+..
T Consensus 131 ~a~~~l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~~~--~~-~~~~~~~ 205 (326)
T cd08272 131 TAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGA-RVYATASS-EKAAFARSLGADPIIYYR--ET-VVEYVAE 205 (326)
T ss_pred HHHHHHHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCC-EEEEEech-HHHHHHHHcCCCEEEecc--hh-HHHHHHH
Confidence 888887 568899999999998 69999999999999999 56777677 888888999987776642 23 5555544
Q ss_pred HHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeecc------------CCC
Q 017793 249 IQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY------------RST 316 (366)
Q Consensus 249 ~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~ 316 (366)
+. .+.++|+++|++++. .....+++++++|+++.++... .........++..+.+.... .+.
T Consensus 206 ~~--~~~~~d~v~~~~~~~-~~~~~~~~l~~~g~~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (326)
T cd08272 206 HT--GGRGFDVVFDTVGGE-TLDASFEAVALYGRVVSILGGA---THDLAPLSFRNATYSGVFTLLPLLTGEGRAHHGEI 279 (326)
T ss_pred hc--CCCCCcEEEECCChH-HHHHHHHHhccCCEEEEEecCC---ccchhhHhhhcceEEEEEcccccccccchhhHHHH
Confidence 42 356799999999975 6788999999999999987553 11222223455555554421 235
Q ss_pred hHHHHHHHHCCCCCCCCceE-EEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793 317 WPLCIEFLRSGKIDVKPLIT-HRFGFTQKEIEDAFEISAQGGNAIKVMFNL 366 (366)
Q Consensus 317 ~~~~~~~l~~g~~~~~~~~~-~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~ 366 (366)
+.++++++.++.+ .+.+. +.|++ ++++++++.+.++...+|+++++
T Consensus 280 ~~~~~~~l~~~~l--~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~vv~~~ 326 (326)
T cd08272 280 LREAARLVERGQL--RPLLDPRTFPL--EEAAAAHARLESGSARGKIVIDV 326 (326)
T ss_pred HHHHHHHHHCCCc--ccccccceecH--HHHHHHHHHHHcCCcccEEEEEC
Confidence 7778889999988 34433 77888 99999999999988899999874
No 111
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=2.2e-31 Score=244.44 Aligned_cols=308 Identities=24% Similarity=0.318 Sum_probs=237.2
Q ss_pred ceEEEEeeCC---ceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeC
Q 017793 15 NMAAWLLGIK---TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVG 91 (366)
Q Consensus 15 ~~~~~~~~~~---~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG 91 (366)
||++++.+|. .+.+++.|.|.+.+++|+||+.++++|+.|+....+.. .....|.++|+|++|+|+.+|
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~--------~~~~~~~~~g~e~~G~v~~~G 72 (325)
T cd08271 1 MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGP--------PAWSYPHVPGVDGAGVVVAVG 72 (325)
T ss_pred CeeEEEccCCCcceeEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCC--------CCCCCCcccccceEEEEEEeC
Confidence 6788888887 89999999999999999999999999999998766221 111237789999999999999
Q ss_pred CCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhH
Q 017793 92 SEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLS 170 (366)
Q Consensus 92 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~ 170 (366)
++++++++||+|++.+. ....|+|++|+.++.+.++++|+++++.+++.+. .+.
T Consensus 73 ~~~~~~~~Gd~V~~~~~-------------------------~~~~~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~~~ 127 (325)
T cd08271 73 AKVTGWKVGDRVAYHAS-------------------------LARGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGL 127 (325)
T ss_pred CCCCcCCCCCEEEeccC-------------------------CCCCccceeEEEeCHHHeEECCCCCCHHHHHhhhhhHH
Confidence 99999999999986421 1136899999999999999999999998888664 788
Q ss_pred HHHHHHH-hCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHH
Q 017793 171 VGVHACR-RANVGPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGK 248 (366)
Q Consensus 171 ~a~~~l~-~~~~~~~~~vlI~G~-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~ 248 (366)
+|++++. .+++++|++++|+|+ |++|++++++++..|+ .++.+. ++++.+++.++|++.+++. ...++...+..
T Consensus 128 ~a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~-~v~~~~-~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~ 203 (325)
T cd08271 128 TAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGL-RVITTC-SKRNFEYVKSLGADHVIDY--NDEDVCERIKE 203 (325)
T ss_pred HHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEE-cHHHHHHHHHcCCcEEecC--CCccHHHHHHH
Confidence 8998884 478899999999995 8999999999999999 466654 6677788888998776653 33455555554
Q ss_pred HHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCce--eechHhhhcCcEEEEeecc---------CCCh
Q 017793 249 IQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMT--VALTPAAAREVDVIGIFRY---------RSTW 317 (366)
Q Consensus 249 ~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~---------~~~~ 317 (366)
.. .+.++|++++++++. .....+++++++|+++.++....... .......++.+++...... .+.+
T Consensus 204 ~~--~~~~~d~vi~~~~~~-~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (325)
T cd08271 204 IT--GGRGVDAVLDTVGGE-TAAALAPTLAFNGHLVCIQGRPDASPDPPFTRALSVHEVALGAAHDHGDPAAWQDLRYAG 280 (325)
T ss_pred Hc--CCCCCcEEEECCCcH-hHHHHHHhhccCCEEEEEcCCCCCcchhHHhhcceEEEEEecccccccchhhHHHHHHHH
Confidence 43 256799999999976 55678999999999998864432111 0111223333333333221 1235
Q ss_pred HHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793 318 PLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 366 (366)
Q Consensus 318 ~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~ 366 (366)
.+++++++++.+. +...+.|++ +++.++++.+.++...+|+++++
T Consensus 281 ~~~~~~~~~~~i~--~~~~~~~~~--~~~~~a~~~~~~~~~~~kiv~~~ 325 (325)
T cd08271 281 EELLELLAAGKLE--PLVIEVLPF--EQLPEALRALKDRHTRGKIVVTI 325 (325)
T ss_pred HHHHHHHHCCCee--eccceEEcH--HHHHHHHHHHHcCCccceEEEEC
Confidence 6788999999884 445577888 99999999999988899999874
No 112
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=100.00 E-value=4.1e-31 Score=241.61 Aligned_cols=295 Identities=28% Similarity=0.354 Sum_probs=233.4
Q ss_pred CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCCCCCCCCCCEE
Q 017793 24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRV 103 (366)
Q Consensus 24 ~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V 103 (366)
..+.+.+.+.|.+.+++++|+|.++++|++|+.+..+ .....+|.++|+|++|+|+.+|+++++|++||+|
T Consensus 12 ~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~---------~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V 82 (320)
T cd05286 12 EVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSG---------LYPLPLPFVLGVEGAGVVEAVGPGVTGFKVGDRV 82 (320)
T ss_pred cceEEeecCCCCCCCCEEEEEEEEeecCHHHHHHhcC---------CCCCCCCccCCcceeEEEEEECCCCCCCCCCCEE
Confidence 3567777777778999999999999999999988762 2223457789999999999999999999999999
Q ss_pred EEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhHHHHHHHH-hCCC
Q 017793 104 ALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACR-RANV 181 (366)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~~a~~~l~-~~~~ 181 (366)
++.. ..|+|++|+.++.+.++++|++++.++++.+. ...++++++. ..++
T Consensus 83 ~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~ 134 (320)
T cd05286 83 AYAG----------------------------PPGAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPV 134 (320)
T ss_pred EEec----------------------------CCCceeEEEEecHHHceeCCCCCCHHHHhhccchHHHHHHHHHHhcCC
Confidence 8631 26899999999999999999999998887664 6778888874 5889
Q ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEE
Q 017793 182 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS 260 (366)
Q Consensus 182 ~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v 260 (366)
+++++|||+| +|++|++++++++.+|+ .+++++.++++.+.++++|++.+++. ...++...+..+. .+.++|++
T Consensus 135 ~~g~~vlI~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~--~~~~~d~v 209 (320)
T cd05286 135 KPGDTVLVHAAAGGVGLLLTQWAKALGA-TVIGTVSSEEKAELARAAGADHVINY--RDEDFVERVREIT--GGRGVDVV 209 (320)
T ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHCCCCEEEeC--CchhHHHHHHHHc--CCCCeeEE
Confidence 9999999999 69999999999999999 67888888899999999999877653 2245555554432 35689999
Q ss_pred EEcCCChHHHHHHHHhhcCCceEEEEcccCCC-ceeechHhhhcCcEEEEeecc---------CCChHHHHHHHHCCCCC
Q 017793 261 FDCVGFDKTMSTALNATRPGGKVCLIGLAKTE-MTVALTPAAAREVDVIGIFRY---------RSTWPLCIEFLRSGKID 330 (366)
Q Consensus 261 ld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~l~~g~~~ 330 (366)
++|+++. ....++++++++|+++.+|..... ..+....+..+++++.+.... .+.++++++++.++.+.
T Consensus 210 l~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 288 (320)
T cd05286 210 YDGVGKD-TFEGSLDSLRPRGTLVSFGNASGPVPPFDLLRLSKGSLFLTRPSLFHYIATREELLARAAELFDAVASGKLK 288 (320)
T ss_pred EECCCcH-hHHHHHHhhccCcEEEEEecCCCCCCccCHHHHHhcCcEEEEEehhhhcCCHHHHHHHHHHHHHHHHCCCCc
Confidence 9999974 788999999999999999864432 122222333556666543211 23456788899999884
Q ss_pred CCCceEEEecCChhhHHHHHHHHHcCCCceEEEee
Q 017793 331 VKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 365 (366)
Q Consensus 331 ~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~ 365 (366)
+ ...+.|++ ++++++++.+.++...+|++++
T Consensus 289 ~--~~~~~~~~--~~~~~a~~~~~~~~~~~~vv~~ 319 (320)
T cd05286 289 V--EIGKRYPL--ADAAQAHRDLESRKTTGKLLLI 319 (320)
T ss_pred C--cccceEcH--HHHHHHHHHHHcCCCCceEEEe
Confidence 3 35577888 9999999999999888999875
No 113
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=2.8e-31 Score=244.59 Aligned_cols=299 Identities=25% Similarity=0.312 Sum_probs=230.4
Q ss_pred eEEEEeeC---CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCC
Q 017793 16 MAAWLLGI---KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGS 92 (366)
Q Consensus 16 ~~~~~~~~---~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~ 92 (366)
|++++... ..+++++.|.|.|.+++|+|++.++++|++|+.+..|... ....+|+++|+|++|+|+.+|+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-------~~~~~~~~~g~e~~G~v~~vG~ 74 (331)
T cd08273 2 REVVVTRRGGPEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYP-------DQPPLPFTPGYDLVGRVDALGS 74 (331)
T ss_pred eeEEEccCCCcccEEEeccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCC-------CCCCCCcccccceEEEEEEeCC
Confidence 56666633 5688999999999999999999999999999988773211 1124688999999999999999
Q ss_pred CCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhHH
Q 017793 93 EVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSV 171 (366)
Q Consensus 93 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~~ 171 (366)
++++|++||+|++.+ ..|+|++|+.++.+.++++|+++++++++.+. .+.+
T Consensus 75 ~v~~~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~t 126 (331)
T cd08273 75 GVTGFEVGDRVAALT----------------------------RVGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVT 126 (331)
T ss_pred CCccCCCCCEEEEeC----------------------------CCcceeeEEEechHHeEECCCCCCHHHHHhhhhHHHH
Confidence 999999999998631 24899999999999999999999998887665 7888
Q ss_pred HHHHHHh-CCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHH
Q 017793 172 GVHACRR-ANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKI 249 (366)
Q Consensus 172 a~~~l~~-~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~ 249 (366)
||+++.. .+++++++++|+| +|++|++++++|+..|+ .++++.. +++.++++++|+.. ++. ...++... ..
T Consensus 127 a~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~v~~~~~-~~~~~~~~~~g~~~-~~~--~~~~~~~~--~~ 199 (331)
T cd08273 127 AYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGA-EVYGTAS-ERNHAALRELGATP-IDY--RTKDWLPA--ML 199 (331)
T ss_pred HHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeC-HHHHHHHHHcCCeE-EcC--CCcchhhh--hc
Confidence 9998854 7899999999998 59999999999999999 6777766 88889999999754 232 22333322 12
Q ss_pred HHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeech--------------Hhh--hcCcEEEEeecc
Q 017793 250 QNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALT--------------PAA--AREVDVIGIFRY 313 (366)
Q Consensus 250 ~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~--------------~~~--~~~~~~~~~~~~ 313 (366)
.++++|+++||+++. ....++++++++|+++.+|........... ... ....+.......
T Consensus 200 ---~~~~~d~vl~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (331)
T cd08273 200 ---TPGGVDVVFDGVGGE-SYEESYAALAPGGTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLLPTGRRATFYYVWRD 275 (331)
T ss_pred ---cCCCceEEEECCchH-HHHHHHHHhcCCCEEEEEccCCCCCCccccccchhhhhhhhhhhcceeccceeEEEeechh
Confidence 246899999999977 488899999999999999865432211100 011 112222222211
Q ss_pred --------CCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEe
Q 017793 314 --------RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF 364 (366)
Q Consensus 314 --------~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi 364 (366)
.+.+++++++++++.+ .+.+.+.+++ ++++++++.+.++...||+|+
T Consensus 276 ~~~~p~~~~~~~~~~~~~~~~~~l--~~~~~~~~~~--~~~~~a~~~~~~~~~~gkvv~ 330 (331)
T cd08273 276 RAEDPKLFRQDLTELLDLLAKGKI--RPKIAKRLPL--SEVAEAHRLLESGKVVGKIVL 330 (331)
T ss_pred cccCHHHHHHHHHHHHHHHHCCCc--cCCcceEEcH--HHHHHHHHHHHcCCCcceEEe
Confidence 3467789999999998 4456678888 999999999999988899886
No 114
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=100.00 E-value=4.2e-31 Score=236.08 Aligned_cols=266 Identities=37% Similarity=0.649 Sum_probs=216.3
Q ss_pred cEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccC
Q 017793 40 DVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKA 119 (366)
Q Consensus 40 evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~ 119 (366)
||+|+|.++++|+.|+....|... ....+|.++|+|++|+|+++|++++.|++||+|+..+..+|+.|.+|..
T Consensus 1 ~v~i~v~~~~i~~~d~~~~~g~~~-------~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~ 73 (271)
T cd05188 1 EVLVRVEAAGLCGTDLHIRRGGYP-------PPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRE 73 (271)
T ss_pred CeEEEEEEEEecchhHHHHcCCCC-------cCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHh
Confidence 689999999999999998874321 1234578999999999999999999999999999999999999999996
Q ss_pred CCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccc-hhhHHHHHHHHh-CCCCCCCEEEEECCCHHHH
Q 017793 120 GSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACRR-ANVGPETNVMIMGSGPIGL 197 (366)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~-~~~~~a~~~l~~-~~~~~~~~vlI~G~g~vG~ 197 (366)
.|+...+.+ ....|+|++|+.++.+.++++|+++++++++.+ .++.+|++++.. ..++++++|||+|+|++|+
T Consensus 74 ----~~~~~~~~~-~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~G~ 148 (271)
T cd05188 74 ----LCPGGGILG-EGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGGVGL 148 (271)
T ss_pred ----hCCCCCEec-cccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHH
Confidence 676665444 345899999999999999999999999999888 489999999865 5558999999999766999
Q ss_pred HHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhh
Q 017793 198 VTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNAT 277 (366)
Q Consensus 198 ~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l 277 (366)
+++++++..|. .++++++++++.++++++|++.++++. ..++...+. ...+.++|++++++++......+++++
T Consensus 149 ~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~---~~~~~~~d~vi~~~~~~~~~~~~~~~l 222 (271)
T cd05188 149 LAAQLAKAAGA-RVIVTDRSDEKLELAKELGADHVIDYK--EEDLEEELR---LTGGGGADVVIDAVGGPETLAQALRLL 222 (271)
T ss_pred HHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceeccCC--cCCHHHHHH---HhcCCCCCEEEECCCCHHHHHHHHHhc
Confidence 99999999997 788888999999999999988776543 234444443 223678999999999856888999999
Q ss_pred cCCceEEEEcccCCCceee-chHhhhcCcEEEEeecc-CCChHHHHHH
Q 017793 278 RPGGKVCLIGLAKTEMTVA-LTPAAAREVDVIGIFRY-RSTWPLCIEF 323 (366)
Q Consensus 278 ~~~G~~v~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 323 (366)
+++|+++.++......... ....+.++.++.++..+ ..++++++++
T Consensus 223 ~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (271)
T cd05188 223 RPGGRIVVVGGTSGGPPLDDLRRLLFKELTIIGSTGGTREDFEEALDL 270 (271)
T ss_pred ccCCEEEEEccCCCCCCcccHHHHHhcceEEEEeecCCHHHHHHHHhh
Confidence 9999999998665433222 33467788888888765 4466666655
No 115
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=100.00 E-value=8.3e-31 Score=238.03 Aligned_cols=288 Identities=23% Similarity=0.385 Sum_probs=226.7
Q ss_pred CCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCC
Q 017793 33 LPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCG 112 (366)
Q Consensus 33 ~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~ 112 (366)
.|.+.+++++||+.++++|+.|+....+.+. ....+|.++|+|++|+|+++|+++++|++||+|++...
T Consensus 2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~-------~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~---- 70 (303)
T cd08251 2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYP-------TMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTG---- 70 (303)
T ss_pred CCCCCCCEEEEEEEEeecChHHHHHHCCCCC-------CCCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecC----
Confidence 5678999999999999999999988774321 12345889999999999999999999999999986421
Q ss_pred CCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhHHHHHHHHhCCCCCCCEEEEEC
Q 017793 113 HCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACRRANVGPETNVMIMG 191 (366)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~~a~~~l~~~~~~~~~~vlI~G 191 (366)
...|+|++|+.++.+.++++|+++++++++.+. .+.+||++++..+++++++++|+|
T Consensus 71 ----------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~g~~vli~~ 128 (303)
T cd08251 71 ----------------------ESMGGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAFARAGLAKGEHILIQT 128 (303)
T ss_pred ----------------------CCCcceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHHHhcCCCCCCEEEEec
Confidence 136899999999999999999999999888775 788899998888899999999996
Q ss_pred -CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHH
Q 017793 192 -SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTM 270 (366)
Q Consensus 192 -~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~ 270 (366)
+|.+|++++|+++.+|+ .++++++++++.+.++++|++.+++... .++...+..+. .+.++|+++|++++ ...
T Consensus 129 ~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~i~~~~--~~~~~d~v~~~~~~-~~~ 202 (303)
T cd08251 129 ATGGTGLMAVQLARLKGA-EIYATASSDDKLEYLKQLGVPHVINYVE--EDFEEEIMRLT--GGRGVDVVINTLSG-EAI 202 (303)
T ss_pred CCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeCCC--ccHHHHHHHHc--CCCCceEEEECCcH-HHH
Confidence 79999999999999999 6888888888999999999988776432 45666655443 35689999999975 578
Q ss_pred HHHHHhhcCCceEEEEcccCCC--ceeechHhhhcCcEEE-----Eeecc-----CCChHHHHHHHHCCCCCCCCceEEE
Q 017793 271 STALNATRPGGKVCLIGLAKTE--MTVALTPAAAREVDVI-----GIFRY-----RSTWPLCIEFLRSGKIDVKPLITHR 338 (366)
Q Consensus 271 ~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~~~-----~~~~~-----~~~~~~~~~~l~~g~~~~~~~~~~~ 338 (366)
...+++++++|+++.++..... ....... +.++..+. ..... .+.+.+++++++++.+ .+..++.
T Consensus 203 ~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~ 279 (303)
T cd08251 203 QKGLNCLAPGGRYVEIAMTALKSAPSVDLSV-LSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEEGEL--RPTVSRI 279 (303)
T ss_pred HHHHHHhccCcEEEEEeccCCCccCccChhH-hhcCceEEEEehHHhhhhCHHHHHHHHHHHHHHHHCCCc--cCCCceE
Confidence 8899999999999998754321 1111111 11222211 11111 2357778899999988 4445677
Q ss_pred ecCChhhHHHHHHHHHcCCCceEEEe
Q 017793 339 FGFTQKEIEDAFEISAQGGNAIKVMF 364 (366)
Q Consensus 339 ~~l~~~~~~~a~~~~~~~~~~gkvvi 364 (366)
|++ ++++++++.+.+++..||+++
T Consensus 280 ~~~--~~~~~~~~~~~~~~~~~~iv~ 303 (303)
T cd08251 280 FPF--DDIGEAYRYLSDRENIGKVVV 303 (303)
T ss_pred EcH--HHHHHHHHHHHhCCCcceEeC
Confidence 888 999999999999988999874
No 116
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=9.6e-30 Score=233.55 Aligned_cols=311 Identities=27% Similarity=0.389 Sum_probs=239.6
Q ss_pred ceEEEEeeC---CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeC
Q 017793 15 NMAAWLLGI---KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVG 91 (366)
Q Consensus 15 ~~~~~~~~~---~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG 91 (366)
||++++... ..+.+++.+.|.+++++++|++.++++|+.|+....+... ....+|.++|+|++|+|+.+|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~-------~~~~~~~~~g~e~~G~v~~~G 73 (328)
T cd08268 1 MRAVRFHQFGGPEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYI-------EPPPLPARLGYEAAGVVEAVG 73 (328)
T ss_pred CeEEEEeccCCcceeEEeecCCCCCCCCeEEEEEEEEecChHHhheeccccC-------CCCCCCCCCCcceEEEEEeeC
Confidence 466666643 4677888888888999999999999999999987663211 113447889999999999999
Q ss_pred CCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhH
Q 017793 92 SEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLS 170 (366)
Q Consensus 92 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~ 170 (366)
+++++|++||+|+..+... ....|++++|+.++.+.++++|+++++++++.+. .+.
T Consensus 74 ~~~~~~~~Gd~V~~~~~~~-----------------------~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 130 (328)
T cd08268 74 AGVTGFAVGDRVSVIPAAD-----------------------LGQYGTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYL 130 (328)
T ss_pred CCCCcCCCCCEEEeccccc-----------------------cCCCccceEEEEechHhcEeCCCCCCHHHHHHhhhHHH
Confidence 9999999999998753210 1236899999999999999999999988877664 788
Q ss_pred HHHHHHH-hCCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHH
Q 017793 171 VGVHACR-RANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGK 248 (366)
Q Consensus 171 ~a~~~l~-~~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~ 248 (366)
+++.++. ...++++++++|+| +|++|++++++++..|+ .++.++.++++.+.++++|.+.+++.. ..++...+.+
T Consensus 131 ~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~ 207 (328)
T cd08268 131 TAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGA-TVIATTRTSEKRDALLALGAAHVIVTD--EEDLVAEVLR 207 (328)
T ss_pred HHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEecC--CccHHHHHHH
Confidence 8998885 57888999999998 59999999999999999 677777888888888889987776643 2455555544
Q ss_pred HHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCC-ceeechHhhhcCcEEEEeecc---------CCChH
Q 017793 249 IQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE-MTVALTPAAAREVDVIGIFRY---------RSTWP 318 (366)
Q Consensus 249 ~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~---------~~~~~ 318 (366)
.. .+.++|+++++.++ .....++++++++|+++.+|..... ...+....+.++..+.+.... ...++
T Consensus 208 ~~--~~~~~d~vi~~~~~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (328)
T cd08268 208 IT--GGKGVDVVFDPVGG-PQFAKLADALAPGGTLVVYGALSGEPTPFPLKAALKKSLTFRGYSLDEITLDPEARRRAIA 284 (328)
T ss_pred Hh--CCCCceEEEECCch-HhHHHHHHhhccCCEEEEEEeCCCCCCCCchHHHhhcCCEEEEEecccccCCHHHHHHHHH
Confidence 43 24579999999997 4778889999999999998854431 222333345666666665422 12355
Q ss_pred HHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEee
Q 017793 319 LCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 365 (366)
Q Consensus 319 ~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~ 365 (366)
.+.+++.++.+. +.....|++ +++.++++.+.++...+|++++
T Consensus 285 ~~~~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~~~~~~~~vv~~ 327 (328)
T cd08268 285 FILDGLASGALK--PVVDRVFPF--DDIVEAHRYLESGQQIGKIVVT 327 (328)
T ss_pred HHHHHHHCCCCc--CCcccEEcH--HHHHHHHHHHHcCCCCceEEEe
Confidence 566677788874 345577888 9999999999998888999986
No 117
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=100.00 E-value=7.2e-30 Score=234.08 Aligned_cols=307 Identities=25% Similarity=0.329 Sum_probs=239.6
Q ss_pred ceEEEEeeC---CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeC
Q 017793 15 NMAAWLLGI---KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVG 91 (366)
Q Consensus 15 ~~~~~~~~~---~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG 91 (366)
|+++.+..+ ..+.+++.+.|.+++++++|++.++++|+.|+....+.+ ..+..+|.++|+|++|+|+.+|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~-------~~~~~~~~~~g~e~~G~v~~vg 73 (325)
T TIGR02824 1 MKAIEITEPGGPEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKY-------PPPPGASDILGLEVAGEVVAVG 73 (325)
T ss_pred CceEEEccCCCcccceEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCC-------CCCCCCCCCccceeEEEEEEeC
Confidence 455655543 457777777777899999999999999999998766321 1112357889999999999999
Q ss_pred CCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhH
Q 017793 92 SEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLS 170 (366)
Q Consensus 92 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~ 170 (366)
++++++++||+|+.. ..+|+|++|+.++.+.++++|+++++.+++.+. .+.
T Consensus 74 ~~~~~~~~Gd~V~~~----------------------------~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ 125 (325)
T TIGR02824 74 EGVSRWKVGDRVCAL----------------------------VAGGGYAEYVAVPAGQVLPVPEGLSLVEAAALPETFF 125 (325)
T ss_pred CCCCCCCCCCEEEEc----------------------------cCCCcceeEEEecHHHcEeCCCCCCHHHHHhhhHHHH
Confidence 999999999999853 135899999999999999999999988887664 788
Q ss_pred HHHHHH-HhCCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHH
Q 017793 171 VGVHAC-RRANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGK 248 (366)
Q Consensus 171 ~a~~~l-~~~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~ 248 (366)
++++++ +...++++++++|+| +|++|++++++++..|+ .++++.+++++.+.++++|++.+++. ...++...+..
T Consensus 126 ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~ 202 (325)
T TIGR02824 126 TVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGA-RVFTTAGSDEKCAACEALGADIAINY--REEDFVEVVKA 202 (325)
T ss_pred HHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEec--CchhHHHHHHH
Confidence 888886 558899999999998 59999999999999999 67777788888888889998766553 22445555544
Q ss_pred HHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCC-CceeechHhhhcCcEEEEeeccC-----------CC
Q 017793 249 IQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT-EMTVALTPAAAREVDVIGIFRYR-----------ST 316 (366)
Q Consensus 249 ~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~-----------~~ 316 (366)
.. .+.++|++++++|+. .....+++++++|+++.+|.... ........+..++.++.+..... ..
T Consensus 203 ~~--~~~~~d~~i~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (325)
T TIGR02824 203 ET--GGKGVDVILDIVGGS-YLNRNIKALALDGRIVQIGFQGGRKAELDLGPLLAKRLTITGSTLRARPVAEKAAIAAEL 279 (325)
T ss_pred Hc--CCCCeEEEEECCchH-HHHHHHHhhccCcEEEEEecCCCCcCCCChHHHHhcCCEEEEEehhhcchhhhHHHHHHH
Confidence 43 245799999999965 78889999999999999986432 12333344447788888765331 12
Q ss_pred hHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793 317 WPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 366 (366)
Q Consensus 317 ~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~ 366 (366)
+.+++++++++.+ .+..++.+++ ++++++++.+.++...||+++++
T Consensus 280 ~~~~~~~~~~~~l--~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~ 325 (325)
T TIGR02824 280 REHVWPLLASGRV--RPVIDKVFPL--EDAAQAHALMESGDHIGKIVLTV 325 (325)
T ss_pred HHHHHHHHHCCcc--cCccccEEeH--HHHHHHHHHHHhCCCcceEEEeC
Confidence 4567889999888 4446677888 99999999999988899999875
No 118
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=100.00 E-value=2.7e-30 Score=235.18 Aligned_cols=301 Identities=27% Similarity=0.378 Sum_probs=231.8
Q ss_pred ceEEEEeeCC---ceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeC
Q 017793 15 NMAAWLLGIK---TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVG 91 (366)
Q Consensus 15 ~~~~~~~~~~---~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG 91 (366)
|+++++..++ .+.+++.+.|.++++||+||+.++++|+.|+....|... .......|.++|+|++|+|+.+|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~-----~~~~~~~~~~~g~e~~G~v~~~G 75 (309)
T cd05289 1 MKAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLK-----AAFPLTLPLIPGHDVAGVVVAVG 75 (309)
T ss_pred CceEEEcccCCccceeecccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCcc-----ccCCCCCCCccccceeEEEEeeC
Confidence 5677777553 366778888888999999999999999999988774321 00123457889999999999999
Q ss_pred CCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhH
Q 017793 92 SEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLS 170 (366)
Q Consensus 92 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~ 170 (366)
++++++++||+|+..+.. ...|+|++|+.++.+.++++|+++++..++.+. .+.
T Consensus 76 ~~~~~~~~G~~V~~~~~~-------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 130 (309)
T cd05289 76 PGVTGFKVGDEVFGMTPF-------------------------TRGGAYAEYVVVPADELALKPANLSFEEAAALPLAGL 130 (309)
T ss_pred CCCCCCCCCCEEEEccCC-------------------------CCCCcceeEEEecHHHhccCCCCCCHHHHHhhhHHHH
Confidence 999999999999864210 126899999999999999999999988887765 677
Q ss_pred HHHHHHHh-CCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHH
Q 017793 171 VGVHACRR-ANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGK 248 (366)
Q Consensus 171 ~a~~~l~~-~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~ 248 (366)
++++++.. ..+.+++++||+| +|.+|++++++++..|+ .++++..++ +.++++++|++.+++... .++..
T Consensus 131 ~a~~~~~~~~~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~-~~~~~~~~g~~~~~~~~~--~~~~~---- 202 (309)
T cd05289 131 TAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGA-RVIATASAA-NADFLRSLGADEVIDYTK--GDFER---- 202 (309)
T ss_pred HHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecch-hHHHHHHcCCCEEEeCCC--Cchhh----
Confidence 88888865 5589999999999 59999999999999999 566666666 788888899877665432 23322
Q ss_pred HHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeecc--CCChHHHHHHHHC
Q 017793 249 IQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY--RSTWPLCIEFLRS 326 (366)
Q Consensus 249 ~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~ 326 (366)
...+.++|++++++++. ....++++++++|+++.+|....... ....++..+...... .+.++++++++++
T Consensus 203 --~~~~~~~d~v~~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (309)
T cd05289 203 --AAAPGGVDAVLDTVGGE-TLARSLALVKPGGRLVSIAGPPPAEQ----AAKRRGVRAGFVFVEPDGEQLAELAELVEA 275 (309)
T ss_pred --ccCCCCceEEEECCchH-HHHHHHHHHhcCcEEEEEcCCCcchh----hhhhccceEEEEEecccHHHHHHHHHHHHC
Confidence 12356799999999976 78899999999999999986443211 222333443333222 4578889999999
Q ss_pred CCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEe
Q 017793 327 GKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF 364 (366)
Q Consensus 327 g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi 364 (366)
+.+ .+.+++.|++ ++++++++.+..+...+|+++
T Consensus 276 ~~~--~~~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~ 309 (309)
T cd05289 276 GKL--RPVVDRVFPL--EDAAEAHERLESGHARGKVVL 309 (309)
T ss_pred CCE--EEeeccEEcH--HHHHHHHHHHHhCCCCCcEeC
Confidence 987 4456778888 999999999998888888874
No 119
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=100.00 E-value=9.5e-30 Score=232.98 Aligned_cols=305 Identities=30% Similarity=0.485 Sum_probs=239.7
Q ss_pred ceEEEEee---CCceEEEEecCCCCC-CCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEe
Q 017793 15 NMAAWLLG---IKTLKIQPYHLPTLG-PQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEV 90 (366)
Q Consensus 15 ~~~~~~~~---~~~~~~~~~~~p~~~-~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~v 90 (366)
|+++++.. +..+.+.+.+ |.+. +++++|++.++++|+.|+....|... .....|.++|+|++|+|+.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-------~~~~~~~~~g~e~~G~v~~~ 72 (323)
T cd08241 1 MKAVVCKELGGPEDLVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQ-------VKPPLPFVPGSEVAGVVEAV 72 (323)
T ss_pred CeEEEEecCCCcceeEEecCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCC-------CCCCCCCcccceeEEEEEEe
Confidence 57777763 2457787777 7666 59999999999999999987763210 11234678999999999999
Q ss_pred CCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccc-hhh
Q 017793 91 GSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPL 169 (366)
Q Consensus 91 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~-~~~ 169 (366)
|++++.+++||+|+..+ ..|++++|+.++.+.++++|+++++.+++.+ ..+
T Consensus 73 g~~~~~~~~G~~V~~~~----------------------------~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~ 124 (323)
T cd08241 73 GEGVTGFKVGDRVVALT----------------------------GQGGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTY 124 (323)
T ss_pred CCCCCCCCCCCEEEEec----------------------------CCceeEEEEEcCHHHceeCCCCCCHHHHhhhhhHH
Confidence 99999999999998631 2589999999999999999999998888755 478
Q ss_pred HHHHHHHH-hCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHH
Q 017793 170 SVGVHACR-RANVGPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVG 247 (366)
Q Consensus 170 ~~a~~~l~-~~~~~~~~~vlI~G~-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~ 247 (366)
.+|+.++. ..+++++++++|+|+ |++|++++++|+..|+ .+++++.++++.+.++++|++..++. ...++...+.
T Consensus 125 ~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~i~ 201 (323)
T cd08241 125 GTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGA-RVIAAASSEEKLALARALGADHVIDY--RDPDLRERVK 201 (323)
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHcCCceeeec--CCccHHHHHH
Confidence 88888875 578899999999995 9999999999999999 58888888889999999998776653 2345656655
Q ss_pred HHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCce-eechHhhhcCcEEEEeecc----------CCC
Q 017793 248 KIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMT-VALTPAAAREVDVIGIFRY----------RST 316 (366)
Q Consensus 248 ~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~----------~~~ 316 (366)
.+. .+.++|++++++|+ .....++++++++|+++.+|....... ........++.++.+.... ...
T Consensus 202 ~~~--~~~~~d~v~~~~g~-~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (323)
T cd08241 202 ALT--GGRGVDVVYDPVGG-DVFEASLRSLAWGGRLLVIGFASGEIPQIPANLLLLKNISVVGVYWGAYARREPELLRAN 278 (323)
T ss_pred HHc--CCCCcEEEEECccH-HHHHHHHHhhccCCEEEEEccCCCCcCcCCHHHHhhcCcEEEEEecccccchhHHHHHHH
Confidence 543 25679999999997 578889999999999999886443222 2222345667777766432 135
Q ss_pred hHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEee
Q 017793 317 WPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 365 (366)
Q Consensus 317 ~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~ 365 (366)
++++++++.++.+ .+..++.|++ +++.++++.+.++...+|++++
T Consensus 279 ~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~~vvv~ 323 (323)
T cd08241 279 LAELFDLLAEGKI--RPHVSAVFPL--EQAAEALRALADRKATGKVVLT 323 (323)
T ss_pred HHHHHHHHHCCCc--ccccceEEcH--HHHHHHHHHHHhCCCCCcEEeC
Confidence 6788999999988 4456678888 9999999999988888898874
No 120
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=99.98 E-value=5.4e-32 Score=261.96 Aligned_cols=320 Identities=19% Similarity=0.215 Sum_probs=256.6
Q ss_pred ccccccccCCcccceEEEEe----eC-CceEEEEecCC---CCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccC
Q 017793 2 AEAIRDDEGDKNQNMAAWLL----GI-KTLKIQPYHLP---TLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIV 73 (366)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~p---~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~ 73 (366)
||.....+.......+|++. +. +.++|.+.|.. +..++.-+.-|.|+.||.+|+....|++..+..+|.. .
T Consensus 1400 RHl~le~~~~~~~~ehAfvntLtrGDlsSlrWies~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~-a 1478 (2376)
T KOG1202|consen 1400 RHLKLEEDKPELPVEHAFVNTLTRGDLSSLRWIESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDL-A 1478 (2376)
T ss_pred eeeEecccCCCcchHHHHHHHhhhccccceeeeecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCcc-c
Confidence 44444444333334455444 33 78999988865 3377778999999999999999999999888887775 5
Q ss_pred CCCcccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEE
Q 017793 74 KKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYK 153 (366)
Q Consensus 74 ~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~ 153 (366)
...+++|-||+|+ .+.|.||+.+ ..--++++.+.++.++++.
T Consensus 1479 ~qdclLGmEFsGR----------d~~GrRvM~m----------------------------vpAksLATt~l~~rd~lWe 1520 (2376)
T KOG1202|consen 1479 SQDCLLGMEFSGR----------DASGRRVMGM----------------------------VPAKSLATTVLASRDFLWE 1520 (2376)
T ss_pred hhhheeceeeccc----------cCCCcEEEEe----------------------------eehhhhhhhhhcchhhhhh
Confidence 6789999999999 6889999974 2356788999999999999
Q ss_pred CCCCCCccccccch-hhHHHHHHH-HhCCCCCCCEEEEE-CCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCc
Q 017793 154 LPDNVSLEEGAMCE-PLSVGVHAC-RRANVGPETNVMIM-GSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD 230 (366)
Q Consensus 154 ~P~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~~~~vlI~-G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~ 230 (366)
+|++..+++|++.+ .++||||++ .+++.|+|+++||| |+|++|++||.+|.+.|+ .|+.+..++||++++++.-..
T Consensus 1521 vP~~WTleeAstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G~-~VFTTVGSaEKRefL~~rFPq 1599 (2376)
T KOG1202|consen 1521 VPSKWTLEEASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHGC-TVFTTVGSAEKREFLLKRFPQ 1599 (2376)
T ss_pred CCcccchhhcccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHHHHcCC-EEEEecCcHHHHHHHHHhchh
Confidence 99999999999998 799999998 68999999999999 589999999999999999 688888999999988764321
Q ss_pred --eeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechH-hhhcCcEE
Q 017793 231 --ETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTP-AAAREVDV 307 (366)
Q Consensus 231 --~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~~ 307 (366)
.-..-++.+.+|..-+.+ .+.++|+|+|+++... +.++.+++||+..|||..+|-.......++.. .+.++.++
T Consensus 1600 Lqe~~~~NSRdtsFEq~vl~--~T~GrGVdlVLNSLae-EkLQASiRCLa~~GRFLEIGKfDLSqNspLGMavfLkNvsf 1676 (2376)
T KOG1202|consen 1600 LQETNFANSRDTSFEQHVLW--HTKGRGVDLVLNSLAE-EKLQASIRCLALHGRFLEIGKFDLSQNSPLGMAVFLKNVSF 1676 (2376)
T ss_pred hhhhcccccccccHHHHHHH--HhcCCCeeeehhhhhH-HHHHHHHHHHHhcCeeeeecceecccCCcchhhhhhcccce
Confidence 111113455677776644 4569999999999984 58999999999999999999666555555554 66788888
Q ss_pred EEeecc------CCChHHHHHHHHCCCCC--CCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793 308 IGIFRY------RSTWPLCIEFLRSGKID--VKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 366 (366)
Q Consensus 308 ~~~~~~------~~~~~~~~~~l~~g~~~--~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~ 366 (366)
+|.... .+.+.++.+++++|.-. .+|+.+++|.- .++++||+++.+|++.||||+++
T Consensus 1677 HGiLLDsvmege~e~~~ev~~Lv~eGIksGvV~PL~ttvF~~--~qvE~AFRfMasGKHIGKVvikv 1741 (2376)
T KOG1202|consen 1677 HGILLDSVMEGEEEMWREVAALVAEGIKSGVVRPLPTTVFHG--QQVEDAFRFMASGKHIGKVVIKV 1741 (2376)
T ss_pred eeeehhhhhcCcHHHHHHHHHHHHhhhccCceeccccccccH--HHHHHHHHHHhccCccceEEEEE
Confidence 887654 45678888888876542 47888888887 99999999999999999999974
No 121
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.98 E-value=6.6e-30 Score=233.99 Aligned_cols=295 Identities=28% Similarity=0.352 Sum_probs=221.4
Q ss_pred EEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEc
Q 017793 27 KIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALE 106 (366)
Q Consensus 27 ~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~ 106 (366)
++++.|.|.++++||+|++.++++|+.|+....|..... .....|.++|+|++|+|.++|++++++++||+|+..
T Consensus 15 ~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~-----~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~ 89 (319)
T cd08267 15 LEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLL-----LGRPFPPIPGMDFAGEVVAVGSGVTRFKVGDEVFGR 89 (319)
T ss_pred ccccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCccc-----ccCCCCCcccceeeEEEEEeCCCCCCCCCCCEEEEe
Confidence 778889999999999999999999999998876322100 012346789999999999999999999999999864
Q ss_pred CCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhHHHHHHHHh-CCCCCC
Q 017793 107 PGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACRR-ANVGPE 184 (366)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~~a~~~l~~-~~~~~~ 184 (366)
.. ....|+|++|+.++.+.++++|+++++++++.+. .+.+||++++. .+++++
T Consensus 90 ~~-------------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g 144 (319)
T cd08267 90 LP-------------------------PKGGGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTALQALRDAGKVKPG 144 (319)
T ss_pred cc-------------------------CCCCceeeEEEEechhheEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCC
Confidence 21 0136899999999999999999999998887765 78889999865 558999
Q ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEc
Q 017793 185 TNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDC 263 (366)
Q Consensus 185 ~~vlI~G~-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~ 263 (366)
++++|+|+ |++|++++++|+..|+ .+++++.+ ++.++++++|++.+++... .++. .. ...++++|++++|
T Consensus 145 ~~vli~g~~g~~g~~~~~la~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~~~~--~~~~---~~--~~~~~~~d~vi~~ 215 (319)
T cd08267 145 QRVLINGASGGVGTFAVQIAKALGA-HVTGVCST-RNAELVRSLGADEVIDYTT--EDFV---AL--TAGGEKYDVIFDA 215 (319)
T ss_pred CEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCH-HHHHHHHHcCCCEeecCCC--CCcc---hh--ccCCCCCcEEEEC
Confidence 99999994 9999999999999999 67777655 7888889999877766432 2332 11 1235679999999
Q ss_pred CCCh-HHHHHHHHhhcCCceEEEEcccCCCceeec-----h-HhhhcCcEEEEeeccCCChHHHHHHHHCCCCCCCCceE
Q 017793 264 VGFD-KTMSTALNATRPGGKVCLIGLAKTEMTVAL-----T-PAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLIT 336 (366)
Q Consensus 264 ~g~~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~ 336 (366)
+++. ......+..++++|+++.+|.......... . ....+.+.........+.+++++++++++.+ .+.++
T Consensus 216 ~~~~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~ 293 (319)
T cd08267 216 VGNSPFSLYRASLALKPGGRYVSVGGGPSGLLLVLLLLPLTLGGGGRRLKFFLAKPNAEDLEQLAELVEEGKL--KPVID 293 (319)
T ss_pred CCchHHHHHHhhhccCCCCEEEEeccccccccccccccchhhccccceEEEEEecCCHHHHHHHHHHHHCCCe--eeeee
Confidence 9853 233344445999999999986543221111 1 1111222222211125568889999999988 44567
Q ss_pred EEecCChhhHHHHHHHHHcCCCceEEEe
Q 017793 337 HRFGFTQKEIEDAFEISAQGGNAIKVMF 364 (366)
Q Consensus 337 ~~~~l~~~~~~~a~~~~~~~~~~gkvvi 364 (366)
+.|++ ++++++++.+.++...+|+++
T Consensus 294 ~~~~~--~~i~~a~~~~~~~~~~~~vvv 319 (319)
T cd08267 294 SVYPL--EDAPEAYRRLKSGRARGKVVI 319 (319)
T ss_pred eEEcH--HHHHHHHHHHhcCCCCCcEeC
Confidence 88888 999999999999888888874
No 122
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.98 E-value=4.9e-29 Score=229.98 Aligned_cols=296 Identities=25% Similarity=0.359 Sum_probs=229.9
Q ss_pred CceEEEEecCCCCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCCCCCCCCCCEE
Q 017793 24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRV 103 (366)
Q Consensus 24 ~~~~~~~~~~p~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V 103 (366)
..+.+.+.+.|.+.+++|+||+.++++|++|+.+..|.+. .....|.++|+|++|+|+.+|+++++|++||+|
T Consensus 12 ~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-------~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V 84 (337)
T cd08275 12 DKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYD-------SAPKPPFVPGFECAGTVEAVGEGVKDFKVGDRV 84 (337)
T ss_pred cceEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCC-------CCCCCCCCCcceeEEEEEEECCCCcCCCCCCEE
Confidence 3678888888888999999999999999999987763210 112457789999999999999999999999999
Q ss_pred EEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhHHHHHHHH-hCCC
Q 017793 104 ALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACR-RANV 181 (366)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~~a~~~l~-~~~~ 181 (366)
+.. ...|+|++|+.++.+.++++|+++++++++.+. .+.++|+++. ..++
T Consensus 85 ~~~----------------------------~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 136 (337)
T cd08275 85 MGL----------------------------TRFGGYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFELGNL 136 (337)
T ss_pred EEe----------------------------cCCCeeeeEEEecHHHeEECCCCCCHHHHhhhhHHHHHHHHHHHHhhCC
Confidence 863 125899999999999999999999988887765 7888998874 5789
Q ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEc-CChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcE
Q 017793 182 GPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITD-VDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDV 259 (366)
Q Consensus 182 ~~~~~vlI~G~-g~vG~~ai~la~~~g~~~vv~v~-~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 259 (366)
+++++|+|+|+ |.+|++++++|+.. . .+.++. ..+++.++++++|++.+++.. ..++...+.... ++++|+
T Consensus 137 ~~~~~vli~g~~g~~g~~~~~~a~~~-~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~---~~~~d~ 209 (337)
T cd08275 137 RPGQSVLVHSAAGGVGLAAGQLCKTV-P-NVTVVGTASASKHEALKENGVTHVIDYR--TQDYVEEVKKIS---PEGVDI 209 (337)
T ss_pred CCCCEEEEEcCcchHHHHHHHHHHHc-c-CcEEEEeCCHHHHHHHHHcCCcEEeeCC--CCcHHHHHHHHh---CCCceE
Confidence 99999999995 99999999999998 2 223332 345577888889987766643 345666655443 467999
Q ss_pred EEEcCCChHHHHHHHHhhcCCceEEEEcccCCCc--ee---------------echHhhhcCcEEEEeecc---------
Q 017793 260 SFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEM--TV---------------ALTPAAAREVDVIGIFRY--------- 313 (366)
Q Consensus 260 vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~--~~---------------~~~~~~~~~~~~~~~~~~--------- 313 (366)
++||+|+. ....++++++++|+++.+|...... .. .......++..+.+....
T Consensus 210 v~~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (337)
T cd08275 210 VLDALGGE-DTRKSYDLLKPMGRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFEERELL 288 (337)
T ss_pred EEECCcHH-HHHHHHHhhccCcEEEEEeecCCcCcccccccccccccccccccCHHHHhhcCceEEEeechhhhhChHHH
Confidence 99999975 6788999999999999988543211 11 112345566666665422
Q ss_pred CCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793 314 RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 366 (366)
Q Consensus 314 ~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~ 366 (366)
...+.++++++.++.+ .+...+.|++ ++++++++.+.++...||+++++
T Consensus 289 ~~~~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~kvv~~~ 337 (337)
T cd08275 289 TEVMDKLLKLYEEGKI--KPKIDSVFPF--EEVGEAMRRLQSRKNIGKVVLTP 337 (337)
T ss_pred HHHHHHHHHHHHCCCC--CCceeeEEcH--HHHHHHHHHHHcCCCcceEEEeC
Confidence 1236778889999987 4446678888 99999999999998899999864
No 123
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=99.97 E-value=6.5e-29 Score=223.90 Aligned_cols=276 Identities=26% Similarity=0.332 Sum_probs=217.3
Q ss_pred CcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCcccc
Q 017793 39 QDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCK 118 (366)
Q Consensus 39 ~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~ 118 (366)
+||+||+.++++|++|++...| .. ..+|.++|+|++|+|+++|+++++|++||+|++.
T Consensus 1 ~~v~i~v~~~~~~~~d~~~~~g---------~~-~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~------------ 58 (293)
T cd05195 1 DEVEVEVKAAGLNFRDVLVALG---------LL-PGDETPLGLECSGIVTRVGSGVTGLKVGDRVMGL------------ 58 (293)
T ss_pred CceEEEEEEEecCHHHHHHHhC---------CC-CCCCCccceeeeEEEEeecCCccCCCCCCEEEEE------------
Confidence 5899999999999999998873 22 2357899999999999999999999999999863
Q ss_pred CCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhHHHHHHH-HhCCCCCCCEEEEEC-CCHH
Q 017793 119 AGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHAC-RRANVGPETNVMIMG-SGPI 195 (366)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~~~~vlI~G-~g~v 195 (366)
..|+|+||+.++.+.++++|+++++.+++.+. +..+++.++ +..++++|++++|+| +|++
T Consensus 59 -----------------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~ 121 (293)
T cd05195 59 -----------------APGAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGV 121 (293)
T ss_pred -----------------ecCcccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHH
Confidence 25899999999999999999999998888774 778888887 447899999999997 7999
Q ss_pred HHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcC--CceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHH
Q 017793 196 GLVTLLAARAFGAPRIIITDVDVQRLSIARNLG--ADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTA 273 (366)
Q Consensus 196 G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~ 273 (366)
|++++|+++..|+ .++++..++++.+.+++++ ++..++. ...++.+.+.+.. .+.++|+++|++|+. .++.+
T Consensus 122 g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~--~~~~~d~vi~~~~~~-~~~~~ 195 (293)
T cd05195 122 GQAAIQLAQHLGA-EVFATVGSEEKREFLRELGGPVDHIFSS--RDLSFADGILRAT--GGRGVDVVLNSLSGE-LLRAS 195 (293)
T ss_pred HHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhCCCcceEeec--CchhHHHHHHHHh--CCCCceEEEeCCCch-HHHHH
Confidence 9999999999999 6888888888888888888 5666553 2245555555443 256899999999987 88999
Q ss_pred HHhhcCCceEEEEcccCCCc--eeechHhhhcCcEEEEeecc----------CCChHHHHHHHHCCCCCCCCceEEEecC
Q 017793 274 LNATRPGGKVCLIGLAKTEM--TVALTPAAAREVDVIGIFRY----------RSTWPLCIEFLRSGKIDVKPLITHRFGF 341 (366)
Q Consensus 274 ~~~l~~~G~~v~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~l~~g~~~~~~~~~~~~~l 341 (366)
+++++++|+++.+|...... ..... .+.++..+...... .+.+.++++++.++.+ .+...+.+.+
T Consensus 196 ~~~l~~~g~~v~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 272 (293)
T cd05195 196 WRCLAPFGRFVEIGKRDILSNSKLGMR-PFLRNVSFSSVDLDQLARERPELLRELLREVLELLEAGVL--KPLPPTVVPS 272 (293)
T ss_pred HHhcccCceEEEeeccccccCCccchh-hhccCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCc--ccCCCeeech
Confidence 99999999999988554221 11111 12233343332211 2356788899999988 4555667788
Q ss_pred ChhhHHHHHHHHHcCCCceEEEe
Q 017793 342 TQKEIEDAFEISAQGGNAIKVMF 364 (366)
Q Consensus 342 ~~~~~~~a~~~~~~~~~~gkvvi 364 (366)
++++++++.+.++...||+++
T Consensus 273 --~~~~~a~~~~~~~~~~~~ivv 293 (293)
T cd05195 273 --ASEIDAFRLMQSGKHIGKVVL 293 (293)
T ss_pred --hhHHHHHHHHhcCCCCceecC
Confidence 999999999999888888874
No 124
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.97 E-value=2.9e-28 Score=218.89 Aligned_cols=248 Identities=28% Similarity=0.418 Sum_probs=198.0
Q ss_pred cCccCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecC
Q 017793 69 ANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPA 148 (366)
Q Consensus 69 ~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~ 148 (366)
+.++.++|.++|+|++|+|+++|+++++|++||+|+.. ++|++|++++.
T Consensus 14 ~~~~~~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~-------------------------------~~~~~~~~v~~ 62 (277)
T cd08255 14 GTEKLPLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF-------------------------------GPHAERVVVPA 62 (277)
T ss_pred cCccCcCCcccCcceeEEEEEeCCCCCCCCCCCEEEec-------------------------------CCcceEEEcCH
Confidence 45566789999999999999999999999999999852 46899999999
Q ss_pred CceEECCCCCCccccccchhhHHHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcC
Q 017793 149 KLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLG 228 (366)
Q Consensus 149 ~~~~~~P~~~~~~~aa~~~~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg 228 (366)
+.++++|+++++++++.+..+.+||+++...++++++++||+|+|++|++++++|+.+|+++++++++++++.++++++|
T Consensus 63 ~~~~~ip~~l~~~~aa~~~~~~ta~~~~~~~~~~~g~~vlI~g~g~vg~~~i~~a~~~g~~~vi~~~~~~~~~~~~~~~g 142 (277)
T cd08255 63 NLLVPLPDGLPPERAALTALAATALNGVRDAEPRLGERVAVVGLGLVGLLAAQLAKAAGAREVVGVDPDAARRELAEALG 142 (277)
T ss_pred HHeeECcCCCCHHHhHHHHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEECCCHHHHHHHHHcC
Confidence 99999999999888887777888999988888999999999999999999999999999955899989999999999999
Q ss_pred -CceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeec-hHhhhcCcE
Q 017793 229 -ADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVAL-TPAAAREVD 306 (366)
Q Consensus 229 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~~~~~ 306 (366)
++.+..+.. .. ..++++|++||+++........+++++++|+++.+|..... .... ..+..+..+
T Consensus 143 ~~~~~~~~~~----------~~--~~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~-~~~~~~~~~~~~~~ 209 (277)
T cd08255 143 PADPVAADTA----------DE--IGGRGADVVIEASGSPSALETALRLLRDRGRVVLVGWYGLK-PLLLGEEFHFKRLP 209 (277)
T ss_pred CCccccccch----------hh--hcCCCCCEEEEccCChHHHHHHHHHhcCCcEEEEEeccCCC-ccccHHHHHhccCe
Confidence 454433211 01 12568999999998777889999999999999999865443 2111 123333444
Q ss_pred EEEeecc-------------CCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcC-CCceEEEe
Q 017793 307 VIGIFRY-------------RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQG-GNAIKVMF 364 (366)
Q Consensus 307 ~~~~~~~-------------~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~-~~~gkvvi 364 (366)
+.+.... .+.+++++++++++.+ .+.+.+.|++ ++++++++.++++ ....|+++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l--~~~~~~~~~~--~~~~~a~~~~~~~~~~~~k~~~ 277 (277)
T cd08255 210 IRSSQVYGIGRYDRPRRWTEARNLEEALDLLAEGRL--EALITHRVPF--EDAPEAYRLLFEDPPECLKVVL 277 (277)
T ss_pred EEeecccccccccccccccccccHHHHHHHHHcCCc--cccccCccCH--HHHHHHHHHHHcCCccceeeeC
Confidence 4444321 2568899999999997 4445677888 9999999999877 45677764
No 125
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=99.97 E-value=9.2e-28 Score=216.12 Aligned_cols=271 Identities=27% Similarity=0.386 Sum_probs=212.4
Q ss_pred EEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCC
Q 017793 43 VRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSY 122 (366)
Q Consensus 43 Vkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~ 122 (366)
||+.++++|++|+....| .. ..|.++|+|++|+|+++|++++.|++||+|+..
T Consensus 2 i~v~~~~i~~~d~~~~~g---------~~--~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~---------------- 54 (288)
T smart00829 2 VEVRAAGLNFRDVLIALG---------LL--PGEAVLGGECAGVVTRVGPGVTGLAVGDRVMGL---------------- 54 (288)
T ss_pred eeEEEEecCHHHHHHhcC---------CC--CCCCCCCceeEEEEEeeCCCCcCCCCCCEEEEE----------------
Confidence 899999999999988772 22 136789999999999999999999999999853
Q ss_pred CCCCCccccCCCCCCCcceEEEEecCCceEECCCCCCccccccch-hhHHHHHHH-HhCCCCCCCEEEEEC-CCHHHHHH
Q 017793 123 NLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHAC-RRANVGPETNVMIMG-SGPIGLVT 199 (366)
Q Consensus 123 ~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~~~~vlI~G-~g~vG~~a 199 (366)
..|+|+||+.++.+.++++|+++++++++.+. ...+++.++ +...++++++|+|+| +|.+|+++
T Consensus 55 -------------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~ 121 (288)
T smart00829 55 -------------APGSFATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAA 121 (288)
T ss_pred -------------cCCceeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHH
Confidence 25899999999999999999999999888775 777888887 568899999999998 69999999
Q ss_pred HHHHHHCCCCeEEEEcCChhHHHHHHHcCC--ceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhh
Q 017793 200 LLAARAFGAPRIIITDVDVQRLSIARNLGA--DETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNAT 277 (366)
Q Consensus 200 i~la~~~g~~~vv~v~~~~~~~~~~~~lg~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l 277 (366)
+++++..|+ .++++++++++.++++++|+ +.++++. ..++.+.+.... .++++|+++|++++ ......++++
T Consensus 122 ~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~~~--~~~~~d~vi~~~~~-~~~~~~~~~l 195 (288)
T smart00829 122 IQLAQHLGA-EVFATAGSPEKRDFLRELGIPDDHIFSSR--DLSFADEILRAT--GGRGVDVVLNSLAG-EFLDASLRCL 195 (288)
T ss_pred HHHHHHcCC-EEEEEeCCHHHHHHHHHcCCChhheeeCC--CccHHHHHHHHh--CCCCcEEEEeCCCH-HHHHHHHHhc
Confidence 999999999 68888888999999999998 5665542 245555554443 25679999999995 5788899999
Q ss_pred cCCceEEEEcccCCC--ceeechHhhhcCcEEEEeecc---------CCChHHHHHHHHCCCCCCCCceEEEecCChhhH
Q 017793 278 RPGGKVCLIGLAKTE--MTVALTPAAAREVDVIGIFRY---------RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEI 346 (366)
Q Consensus 278 ~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~ 346 (366)
+++|+++.+|..... ...+... +.++..+.+.... .+.+++++++++++.+.+ ...+.|++ +++
T Consensus 196 ~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~--~~~ 270 (288)
T smart00829 196 APGGRFVEIGKRDIRDNSQLGMAP-FRRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLRP--LPVTVFPI--SDV 270 (288)
T ss_pred cCCcEEEEEcCcCCccccccchhh-hcCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccC--cCceEEcH--HHH
Confidence 999999999854321 1112111 2334444333211 234667888999998843 34567888 999
Q ss_pred HHHHHHHHcCCCceEEEe
Q 017793 347 EDAFEISAQGGNAIKVMF 364 (366)
Q Consensus 347 ~~a~~~~~~~~~~gkvvi 364 (366)
+++++.+..+...+|+++
T Consensus 271 ~~~~~~~~~~~~~~~ivv 288 (288)
T smart00829 271 EDAFRYMQQGKHIGKVVL 288 (288)
T ss_pred HHHHHHHhcCCCcceEeC
Confidence 999999999887888874
No 126
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=99.95 E-value=1e-25 Score=191.77 Aligned_cols=282 Identities=16% Similarity=0.183 Sum_probs=217.2
Q ss_pred CCCCCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccc----cceeEEEEEeCCCCCCCCCCCEEEEcCCcC
Q 017793 35 TLGPQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIG----HECAGIIEEVGSEVKSLEVGDRVALEPGIS 110 (366)
Q Consensus 35 ~~~~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G----~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~ 110 (366)
++++++||||..|.+..|.-.-.+.- +.+.. --.|+.+| ..++|+|++. +.+++++||.|...
T Consensus 34 ~~~s~~vlvknlYLS~DPymR~rM~~-----~~~~~--y~~~~~~G~pi~g~GV~kVi~S--~~~~~~~GD~v~g~---- 100 (343)
T KOG1196|consen 34 PLGSGEVLVKNLYLSCDPYMRIRMGK-----PDPSD--YAPPYEPGKPIDGFGVAKVIDS--GHPNYKKGDLVWGI---- 100 (343)
T ss_pred CCCCccEEeEeeeecCCHHHHhhccC-----CCccc--ccCcccCCcEecCCceEEEEec--CCCCCCcCceEEEe----
Confidence 46999999999999999887644441 11111 11223333 3778999885 66789999999752
Q ss_pred CCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCc--eEECCC--C--CCccccccchhhHHHHHHH-HhCCCCC
Q 017793 111 CGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKL--CYKLPD--N--VSLEEGAMCEPLSVGVHAC-RRANVGP 183 (366)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~--~~~~P~--~--~~~~~aa~~~~~~~a~~~l-~~~~~~~ 183 (366)
-+|.||.+++++. .+++|. + +++-..++-++..|||.++ +....++
T Consensus 101 ---------------------------~gWeeysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~pk~ 153 (343)
T KOG1196|consen 101 ---------------------------VGWEEYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSPKK 153 (343)
T ss_pred ---------------------------ccceEEEEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCCCC
Confidence 2799999998753 444444 2 3344444556889999998 5688999
Q ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEE
Q 017793 184 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-LGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF 261 (366)
Q Consensus 184 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl 261 (366)
|++|+|-| +|++|+.+.|+||.+|+ .||++..++||..+++. +|.|..+||.+ +.+..++++.. .+.|+|+.|
T Consensus 154 geTv~VSaAsGAvGql~GQ~Ak~~Gc-~VVGsaGS~EKv~ll~~~~G~d~afNYK~-e~~~~~aL~r~---~P~GIDiYf 228 (343)
T KOG1196|consen 154 GETVFVSAASGAVGQLVGQFAKLMGC-YVVGSAGSKEKVDLLKTKFGFDDAFNYKE-ESDLSAALKRC---FPEGIDIYF 228 (343)
T ss_pred CCEEEEeeccchhHHHHHHHHHhcCC-EEEEecCChhhhhhhHhccCCccceeccC-ccCHHHHHHHh---CCCcceEEE
Confidence 99999998 79999999999999999 89999999999998865 79999999954 35777777664 378999999
Q ss_pred EcCCChHHHHHHHHhhcCCceEEEEcccCC---Ccee---echHhhhcCcEEEEeecc------CCChHHHHHHHHCCCC
Q 017793 262 DCVGFDKTMSTALNATRPGGKVCLIGLAKT---EMTV---ALTPAAAREVDVIGIFRY------RSTWPLCIEFLRSGKI 329 (366)
Q Consensus 262 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~---~~~~---~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~g~~ 329 (366)
|++|+. .++..+..|...||++.+|+.+. ..+. .....+.+++++.++... .+.++.+..++++|+|
T Consensus 229 eNVGG~-~lDavl~nM~~~gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~~d~~~k~ld~l~~~ikegKI 307 (343)
T KOG1196|consen 229 ENVGGK-MLDAVLLNMNLHGRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVSDYLDKYPKFLDFLLPYIKEGKI 307 (343)
T ss_pred eccCcH-HHHHHHHhhhhccceEeeeeehhccccCCccccchhhheeeeEEeeeEEeechhhhhHHHHHHHHHHHhcCce
Confidence 999976 89999999999999999996542 1122 223467788888886543 5667889999999999
Q ss_pred CCCCceEEEecCChhhHHHHHHHHHcCCCceEEEeeC
Q 017793 330 DVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 366 (366)
Q Consensus 330 ~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi~~ 366 (366)
.....+. -+| ++.+.|+.-+-.|+..||.++.+
T Consensus 308 ~y~edi~--~Gl--en~P~A~vglf~GkNvGKqiv~v 340 (343)
T KOG1196|consen 308 TYVEDIA--DGL--ENGPSALVGLFHGKNVGKQLVKV 340 (343)
T ss_pred EEehhHH--HHH--hccHHHHHHHhccCcccceEEEe
Confidence 6555543 357 99999999999999999998864
No 127
>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1.1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....
Probab=99.88 E-value=6.3e-23 Score=157.12 Aligned_cols=109 Identities=39% Similarity=0.745 Sum_probs=96.4
Q ss_pred CCcEEEEEeeeeeccchhhhhhhcccccccccCccCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccc
Q 017793 38 PQDVKVRIKALGICGSDVHHFKVKKLSTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLC 117 (366)
Q Consensus 38 ~~evlVkv~a~~i~~~D~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~ 117 (366)
|+||+|||+++|||++|+++++|. .......|.++|||++|+|+++|+++++|++||+|++.+...|+.|.+|
T Consensus 1 P~eVlVkv~a~gic~~D~~~~~g~-------~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c 73 (109)
T PF08240_consen 1 PGEVLVKVRAAGICGSDLHIREGG-------PPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYC 73 (109)
T ss_dssp TTEEEEEEEEEEE-HHHHHHHTTS-------SSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHH
T ss_pred CCEEEEEEEEeeeCHHHHHHHhhc-------cccCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhh
Confidence 789999999999999999999942 2344678999999999999999999999999999999998889999999
Q ss_pred cCCCCCCCCCccccCCCCCCCcceEEEEecCCceEEC
Q 017793 118 KAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKL 154 (366)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~ 154 (366)
..+.+++|+....++.. .+|+|+||+.+++++++|+
T Consensus 74 ~~~~~~~c~~~~~~g~~-~~G~~aey~~v~~~~~~~v 109 (109)
T PF08240_consen 74 LSGRPNLCPNPEVLGLG-LDGGFAEYVVVPARNLVPV 109 (109)
T ss_dssp HTTTGGGTTTBEETTTS-STCSSBSEEEEEGGGEEEE
T ss_pred cCCccccCCCCCEeEcC-CCCcccCeEEEehHHEEEC
Confidence 99999999998887763 8999999999999999875
No 128
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=99.72 E-value=1e-16 Score=126.94 Aligned_cols=128 Identities=28% Similarity=0.569 Sum_probs=112.6
Q ss_pred HHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHH
Q 017793 194 PIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTA 273 (366)
Q Consensus 194 ~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~ 273 (366)
++|++++|+|+..|+ +|++++++++|+++++++|++.+++++. .++.+.++++.. +.++|+||||+|.+..++.+
T Consensus 1 ~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~~~~~Ga~~~~~~~~--~~~~~~i~~~~~--~~~~d~vid~~g~~~~~~~~ 75 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGA-KVIATDRSEEKLELAKELGADHVIDYSD--DDFVEQIRELTG--GRGVDVVIDCVGSGDTLQEA 75 (130)
T ss_dssp HHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTESEEEETTT--SSHHHHHHHHTT--TSSEEEEEESSSSHHHHHHH
T ss_pred ChHHHHHHHHHHcCC-EEEEEECCHHHHHHHHhhcccccccccc--cccccccccccc--cccceEEEEecCcHHHHHHH
Confidence 589999999999995 8999999999999999999999988654 567777776642 46899999999988899999
Q ss_pred HHhhcCCceEEEEcccC-CCceeechHhhhcCcEEEEeeccC-CChHHHHHHHHC
Q 017793 274 LNATRPGGKVCLIGLAK-TEMTVALTPAAAREVDVIGIFRYR-STWPLCIEFLRS 326 (366)
Q Consensus 274 ~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~ 326 (366)
+++++++|+++.+|... ....++...++.+++++.+++.+. ++++++++++.+
T Consensus 76 ~~~l~~~G~~v~vg~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~la~ 130 (130)
T PF00107_consen 76 IKLLRPGGRIVVVGVYGGDPISFNLMNLMFKEITIRGSWGGSPEDFQEALQLLAQ 130 (130)
T ss_dssp HHHEEEEEEEEEESSTSTSEEEEEHHHHHHTTEEEEEESSGGHHHHHHHHHHHH-
T ss_pred HHHhccCCEEEEEEccCCCCCCCCHHHHHhCCcEEEEEccCCHHHHHHHHHHhcC
Confidence 99999999999999887 667788888999999999999885 889999988864
No 129
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=99.41 E-value=5.1e-12 Score=120.14 Aligned_cols=155 Identities=16% Similarity=0.230 Sum_probs=113.9
Q ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCcee-eecCCCC-----------cchHHHHHH
Q 017793 181 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADET-AKVSTDI-----------EDVDTDVGK 248 (366)
Q Consensus 181 ~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~-~~~~~~~-----------~~~~~~~~~ 248 (366)
..++++|+|+|+|.+|++|++.|+.+|+ .|++++.++++.+.++++|++.+ ++..+.. +++.+..++
T Consensus 162 ~~pg~kVlViGaG~iGL~Ai~~Ak~lGA-~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~ 240 (509)
T PRK09424 162 KVPPAKVLVIGAGVAGLAAIGAAGSLGA-IVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMA 240 (509)
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHH
Confidence 4689999999999999999999999999 79999999999999999999854 4432211 122222222
Q ss_pred HHHhhCCCCcEEEEcCCChH-----H-HHHHHHhhcCCceEEEEccc-CCC--ceeechHhhh-cCcEEEEeeccCCChH
Q 017793 249 IQNAMGSGIDVSFDCVGFDK-----T-MSTALNATRPGGKVCLIGLA-KTE--MTVALTPAAA-REVDVIGIFRYRSTWP 318 (366)
Q Consensus 249 ~~~~~~~~~d~vld~~g~~~-----~-~~~~~~~l~~~G~~v~~g~~-~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~ 318 (366)
......+++|++|+|++.+. . .+..++.++++|+++.++.. .+. ...+...++. +++++.|.+..+..+.
T Consensus 241 ~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n~P~~~p 320 (509)
T PRK09424 241 LFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTDLPSRLP 320 (509)
T ss_pred HHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCCCCCcccccCccceEeECCEEEEEeCCCchhHH
Confidence 21112257999999999643 4 48999999999999999864 332 2333344554 7899999887655555
Q ss_pred -HHHHHHHCCCCCCCCceE
Q 017793 319 -LCIEFLRSGKIDVKPLIT 336 (366)
Q Consensus 319 -~~~~~l~~g~~~~~~~~~ 336 (366)
++.+++.++.+++.+.++
T Consensus 321 ~~As~lla~~~i~l~~lIt 339 (509)
T PRK09424 321 TQSSQLYGTNLVNLLKLLC 339 (509)
T ss_pred HHHHHHHHhCCccHHHHhc
Confidence 699999999886555544
No 130
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=99.40 E-value=1.9e-11 Score=113.40 Aligned_cols=171 Identities=19% Similarity=0.279 Sum_probs=134.8
Q ss_pred HHHH-Hh-CCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHH
Q 017793 173 VHAC-RR-ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQ 250 (366)
Q Consensus 173 ~~~l-~~-~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~ 250 (366)
+.++ +. ...-+|++|+|.|+|.+|+.+++.++..|+ +|++++.++.|.+.++++|++.+ + .. +.
T Consensus 189 ~~~i~r~t~~~l~GktVvViG~G~IG~~va~~ak~~Ga-~ViV~d~d~~R~~~A~~~G~~~~-~-------~~----e~- 254 (413)
T cd00401 189 IDGIKRATDVMIAGKVAVVAGYGDVGKGCAQSLRGQGA-RVIVTEVDPICALQAAMEGYEVM-T-------ME----EA- 254 (413)
T ss_pred HHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEECChhhHHHHHhcCCEEc-c-------HH----HH-
Confidence 4555 33 334689999999999999999999999999 68889999999999999998432 1 11 11
Q ss_pred HhhCCCCcEEEEcCCChHHHHHH-HHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEeeccCC--ChH--HHHHHHH
Q 017793 251 NAMGSGIDVSFDCVGFDKTMSTA-LNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRS--TWP--LCIEFLR 325 (366)
Q Consensus 251 ~~~~~~~d~vld~~g~~~~~~~~-~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~l~ 325 (366)
-.++|+|++|.|....++.. ++.++++|+++.+|.. +..++...+..+.+++.++..+.. .++ ..+.++.
T Consensus 255 ---v~~aDVVI~atG~~~~i~~~~l~~mk~GgilvnvG~~--~~eId~~~L~~~el~i~g~~~~~~~~~~~~g~aI~LLa 329 (413)
T cd00401 255 ---VKEGDIFVTTTGNKDIITGEHFEQMKDGAIVCNIGHF--DVEIDVKGLKENAVEVVNIKPQVDRYELPDGRRIILLA 329 (413)
T ss_pred ---HcCCCEEEECCCCHHHHHHHHHhcCCCCcEEEEeCCC--CCccCHHHHHhhccEEEEccCCcceEEcCCcchhhhhh
Confidence 13689999999998878775 8999999999999854 446777778888899998887733 455 7999999
Q ss_pred CCCC-CCCCceEEE-----ecCChh-hHHHHHHHHHcCCC-ceEEEe
Q 017793 326 SGKI-DVKPLITHR-----FGFTQK-EIEDAFEISAQGGN-AIKVMF 364 (366)
Q Consensus 326 ~g~~-~~~~~~~~~-----~~l~~~-~~~~a~~~~~~~~~-~gkvvi 364 (366)
+|.+ ++.+.+.|. ++| + ++.+++..+.++.. ..|+++
T Consensus 330 ~Grlvnl~~~~gH~~~vmd~sf--~~q~l~a~~l~~~~~~~~~kV~~ 374 (413)
T cd00401 330 EGRLVNLGCATGHPSFVMSNSF--TNQVLAQIELWTNRDKYEVGVYF 374 (413)
T ss_pred CcCCCCCcccCCCccceechhH--HHHHHHHHHHHhcCCcCCCcEEE
Confidence 9999 777777777 778 7 99999999887644 246654
No 131
>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A.
Probab=99.30 E-value=9.5e-13 Score=103.63 Aligned_cols=117 Identities=29% Similarity=0.391 Sum_probs=78.2
Q ss_pred cCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCC--ChHHHHHHHHhhcCCceEEEEcccCCCceeechH--hhh
Q 017793 227 LGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVG--FDKTMSTALNATRPGGKVCLIGLAKTEMTVALTP--AAA 302 (366)
Q Consensus 227 lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g--~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~--~~~ 302 (366)
||++++++|.+ +++ ...+++|+|||++| +...+..++++| ++|+++.++. ...... ...
T Consensus 1 LGAd~vidy~~--~~~---------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~-----~~~~~~~~~~~ 63 (127)
T PF13602_consen 1 LGADEVIDYRD--TDF---------AGPGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGG-----DLPSFARRLKG 63 (127)
T ss_dssp CT-SEEEETTC--SHH---------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-S-----HHHHHHHHHHC
T ss_pred CCcCEEecCCC--ccc---------cCCCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEECC-----cccchhhhhcc
Confidence 69999999863 344 23679999999999 654456777888 9999998874 100111 111
Q ss_pred cCcEEEEeec------cCCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCCceEEEe
Q 017793 303 REVDVIGIFR------YRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF 364 (366)
Q Consensus 303 ~~~~~~~~~~------~~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~gkvvi 364 (366)
...+...... ..+.++++.+++++|++ ++.+.++|+| +++++|++.++++...||+|+
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~l~~l~~l~~~G~l--~~~i~~~f~l--~~~~~A~~~l~~~~~~GKvVl 127 (127)
T PF13602_consen 64 RSIRYSFLFSVDPNAIRAEALEELAELVAEGKL--KPPIDRVFPL--EEAPEAHERLESGHARGKVVL 127 (127)
T ss_dssp HHCEEECCC-H--HHHHHHHHHHHHHHHHTTSS-----EEEEEEG--GGHHHHHHHHHCT--SSEEEE
T ss_pred cceEEEEEEecCCCchHHHHHHHHHHHHHCCCe--EEeeccEECH--HHHHHHHHHHHhCCCCCeEeC
Confidence 2233333321 23459999999999999 8888899999 999999999999999999996
No 132
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=98.68 E-value=2.9e-07 Score=82.29 Aligned_cols=173 Identities=17% Similarity=0.248 Sum_probs=107.1
Q ss_pred hCCCCCCCEEEEECCCHHHHHHHHHHHHCCCC-eEEEEcCChhHHHHHHHc----CCceeeecCCCCcchHHHHHHHHHh
Q 017793 178 RANVGPETNVMIMGSGPIGLVTLLAARAFGAP-RIIITDVDVQRLSIARNL----GADETAKVSTDIEDVDTDVGKIQNA 252 (366)
Q Consensus 178 ~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~-~vv~v~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~~ 252 (366)
...++++++||.+|+|. |..++++++..|.. +|++++.+++..+.+++. +.+.+.... .++ ..+. .
T Consensus 72 ~~~~~~g~~VLDiG~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~~~~---~d~----~~l~-~ 142 (272)
T PRK11873 72 LAELKPGETVLDLGSGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVEFRL---GEI----EALP-V 142 (272)
T ss_pred hccCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEEEEE---cch----hhCC-C
Confidence 46688999999999988 98888888887763 699999999988888763 333221111 111 1111 1
Q ss_pred hCCCCcEEEEcC------CChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEEe-eccCCChHHHHHHHH
Q 017793 253 MGSGIDVSFDCV------GFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGI-FRYRSTWPLCIEFLR 325 (366)
Q Consensus 253 ~~~~~d~vld~~------g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~ 325 (366)
..+.||+|+... .....+..+.+.|++||+++..+..... .. .....+...+.+. .......++..++++
T Consensus 143 ~~~~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~e~~~~l~ 219 (272)
T PRK11873 143 ADNSVDVIISNCVINLSPDKERVFKEAFRVLKPGGRFAISDVVLRG-EL--PEEIRNDAELYAGCVAGALQEEEYLAMLA 219 (272)
T ss_pred CCCceeEEEEcCcccCCCCHHHHHHHHHHHcCCCcEEEEEEeeccC-CC--CHHHHHhHHHHhccccCCCCHHHHHHHHH
Confidence 135799998543 2245788999999999999987654322 11 1111122222211 122345677778887
Q ss_pred CCCC-CCCCceEEEecCChhhHHHHHHHH--HcCCCceEEEe
Q 017793 326 SGKI-DVKPLITHRFGFTQKEIEDAFEIS--AQGGNAIKVMF 364 (366)
Q Consensus 326 ~g~~-~~~~~~~~~~~l~~~~~~~a~~~~--~~~~~~gkvvi 364 (366)
+.-+ .......+.+.+ +++.++++.+ ..+...++.+.
T Consensus 220 ~aGf~~v~i~~~~~~~l--~~~~~~~~~~~~~~~~~~~~~~~ 259 (272)
T PRK11873 220 EAGFVDITIQPKREYRI--PDAREFLEDWGIAPGRQLDGYIV 259 (272)
T ss_pred HCCCCceEEEeccceec--ccHHHHHHHhccccccccCceEE
Confidence 7444 223333345666 8888999888 55555555543
No 133
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.58 E-value=7.8e-07 Score=84.85 Aligned_cols=107 Identities=17% Similarity=0.271 Sum_probs=80.0
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceee-ecCCC-----------CcchHHHHHHH
Q 017793 182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETA-KVSTD-----------IEDVDTDVGKI 249 (366)
Q Consensus 182 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~-~~~~~-----------~~~~~~~~~~~ 249 (366)
.++++++|+|+|.+|++++++++.+|+ .|++++.++++.+.++++|++.+. +..++ ..++.+...++
T Consensus 162 vp~akVlViGaG~iGl~Aa~~ak~lGA-~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~ 240 (511)
T TIGR00561 162 VPPAKVLVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL 240 (511)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence 367999999999999999999999999 588999999999999999987532 21110 12333333333
Q ss_pred HHhhCCCCcEEEEcC---CChH---HHHHHHHhhcCCceEEEEccc
Q 017793 250 QNAMGSGIDVSFDCV---GFDK---TMSTALNATRPGGKVCLIGLA 289 (366)
Q Consensus 250 ~~~~~~~~d~vld~~---g~~~---~~~~~~~~l~~~G~~v~~g~~ 289 (366)
......++|++|+|+ |.+. .....++.+++|+.++.++..
T Consensus 241 ~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d 286 (511)
T TIGR00561 241 FAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAE 286 (511)
T ss_pred HHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeC
Confidence 332346799999999 5443 567788999999999988743
No 134
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed
Probab=98.39 E-value=1.4e-05 Score=70.51 Aligned_cols=131 Identities=21% Similarity=0.347 Sum_probs=85.4
Q ss_pred ceEEEEecCCceEECCCCCCccccccchhhHHHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChh
Q 017793 140 LAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQ 219 (366)
Q Consensus 140 ~~e~~~~~~~~~~~~P~~~~~~~aa~~~~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~ 219 (366)
|.+|.. +...++++++++++..+... ........+... .+++.+||-.|+|. |..++.+++ .|+..+++++.++.
T Consensus 79 ~~~~~~-~~~~~i~i~p~~afgtg~h~-tt~~~l~~l~~~-~~~~~~VLDiGcGs-G~l~i~~~~-~g~~~v~giDis~~ 153 (250)
T PRK00517 79 WEDPPD-PDEINIELDPGMAFGTGTHP-TTRLCLEALEKL-VLPGKTVLDVGCGS-GILAIAAAK-LGAKKVLAVDIDPQ 153 (250)
T ss_pred CcCCCC-CCeEEEEECCCCccCCCCCH-HHHHHHHHHHhh-cCCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEEECCHH
Confidence 344433 56678899998888776532 222223333322 57889999999987 888887655 67767999999999
Q ss_pred HHHHHHHc----CCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCCh---HHHHHHHHhhcCCceEEEEcccC
Q 017793 220 RLSIARNL----GADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFD---KTMSTALNATRPGGKVCLIGLAK 290 (366)
Q Consensus 220 ~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~---~~~~~~~~~l~~~G~~v~~g~~~ 290 (366)
..+.+++. +....+.... +...||+|+.+.... ..+..+.+.|+++|.+++.|...
T Consensus 154 ~l~~A~~n~~~~~~~~~~~~~~---------------~~~~fD~Vvani~~~~~~~l~~~~~~~LkpgG~lilsgi~~ 216 (250)
T PRK00517 154 AVEAARENAELNGVELNVYLPQ---------------GDLKADVIVANILANPLLELAPDLARLLKPGGRLILSGILE 216 (250)
T ss_pred HHHHHHHHHHHcCCCceEEEcc---------------CCCCcCEEEEcCcHHHHHHHHHHHHHhcCCCcEEEEEECcH
Confidence 88877653 2211011000 011599999876543 34567888899999999876443
No 135
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.28 E-value=8.8e-06 Score=68.01 Aligned_cols=114 Identities=16% Similarity=0.200 Sum_probs=83.7
Q ss_pred cccchhhHHHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHH----HHHHHcCCceeeecCCC
Q 017793 163 GAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRL----SIARNLGADETAKVSTD 238 (366)
Q Consensus 163 aa~~~~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~----~~~~~lg~~~~~~~~~~ 238 (366)
.-++........+++...++++++||-+|+|. |..+.-+++..+ +|+++++.++=. ..++.+|.+.+.....+
T Consensus 52 gqtis~P~~vA~m~~~L~~~~g~~VLEIGtGs-GY~aAvla~l~~--~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~gD 128 (209)
T COG2518 52 GQTISAPHMVARMLQLLELKPGDRVLEIGTGS-GYQAAVLARLVG--RVVSIERIEELAEQARRNLETLGYENVTVRHGD 128 (209)
T ss_pred CceecCcHHHHHHHHHhCCCCCCeEEEECCCc-hHHHHHHHHHhC--eEEEEEEcHHHHHHHHHHHHHcCCCceEEEECC
Confidence 33444444455667888899999999999987 999999999888 799999888733 34566887654433222
Q ss_pred -CcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcc
Q 017793 239 -IEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGL 288 (366)
Q Consensus 239 -~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~ 288 (366)
...|. ....||.++-+.+.+......++.|++||+++..-.
T Consensus 129 G~~G~~---------~~aPyD~I~Vtaaa~~vP~~Ll~QL~~gGrlv~PvG 170 (209)
T COG2518 129 GSKGWP---------EEAPYDRIIVTAAAPEVPEALLDQLKPGGRLVIPVG 170 (209)
T ss_pred cccCCC---------CCCCcCEEEEeeccCCCCHHHHHhcccCCEEEEEEc
Confidence 11111 136899999988888777889999999999987533
No 136
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=98.26 E-value=2.7e-06 Score=77.34 Aligned_cols=108 Identities=20% Similarity=0.304 Sum_probs=81.5
Q ss_pred CceEECCCCCCccccccchhhHHHHHHHHhCCC----CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHH-HH
Q 017793 149 KLCYKLPDNVSLEEGAMCEPLSVGVHACRRANV----GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRL-SI 223 (366)
Q Consensus 149 ~~~~~~P~~~~~~~aa~~~~~~~a~~~l~~~~~----~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~-~~ 223 (366)
...+++|+.+..+.++...+.++++.+++.+.. -++.+|+|+|+|.+|..+++.++..|+..|+++++++++. ++
T Consensus 139 ~~a~~~~k~vr~et~i~~~~~sv~~~Av~~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~l 218 (311)
T cd05213 139 QKAIKVGKRVRTETGISRGAVSISSAAVELAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAEEL 218 (311)
T ss_pred HHHHHHHHHHhhhcCCCCCCcCHHHHHHHHHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHH
Confidence 457788999999999888788888877754332 3789999999999999999999988877888888888764 67
Q ss_pred HHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHH
Q 017793 224 ARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKT 269 (366)
Q Consensus 224 ~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~ 269 (366)
++++|+. +.++ .+ +.+. -..+|+||.|++.+..
T Consensus 219 a~~~g~~-~~~~----~~----~~~~----l~~aDvVi~at~~~~~ 251 (311)
T cd05213 219 AKELGGN-AVPL----DE----LLEL----LNEADVVISATGAPHY 251 (311)
T ss_pred HHHcCCe-EEeH----HH----HHHH----HhcCCEEEECCCCCch
Confidence 8888873 2221 11 2222 1358999999998754
No 137
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=98.23 E-value=2.5e-05 Score=73.23 Aligned_cols=102 Identities=24% Similarity=0.260 Sum_probs=78.0
Q ss_pred HHHHHHhC-CCC-CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHH
Q 017793 172 GVHACRRA-NVG-PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKI 249 (366)
Q Consensus 172 a~~~l~~~-~~~-~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~ 249 (366)
+|.++.+. ++. .|++|+|.|.|.+|..+++.++.+|+ +|++++.++.+...+...|++. . +. .+.
T Consensus 198 ~~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga-~ViV~d~dp~ra~~A~~~G~~v-~-------~l----~ea 264 (425)
T PRK05476 198 LLDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGA-RVIVTEVDPICALQAAMDGFRV-M-------TM----EEA 264 (425)
T ss_pred hHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCchhhHHHHhcCCEe-c-------CH----HHH
Confidence 45666554 444 89999999999999999999999999 7999988888876666666542 1 11 122
Q ss_pred HHhhCCCCcEEEEcCCChHHHH-HHHHhhcCCceEEEEcccC
Q 017793 250 QNAMGSGIDVSFDCVGFDKTMS-TALNATRPGGKVCLIGLAK 290 (366)
Q Consensus 250 ~~~~~~~~d~vld~~g~~~~~~-~~~~~l~~~G~~v~~g~~~ 290 (366)
. .++|+++++.|....++ ..+..+++++.++..|...
T Consensus 265 l----~~aDVVI~aTG~~~vI~~~~~~~mK~GailiNvG~~d 302 (425)
T PRK05476 265 A----ELGDIFVTATGNKDVITAEHMEAMKDGAILANIGHFD 302 (425)
T ss_pred H----hCCCEEEECCCCHHHHHHHHHhcCCCCCEEEEcCCCC
Confidence 1 36999999999877676 5778899999998887654
No 138
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=98.20 E-value=4.5e-05 Score=68.76 Aligned_cols=111 Identities=15% Similarity=0.237 Sum_probs=80.7
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793 183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD 262 (366)
Q Consensus 183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld 262 (366)
.+.+++|+|.|.+|..+++.++.+|+ .|.++++++++.+.++++|+..+ .+ ..+.+. -..+|+||+
T Consensus 151 ~g~kvlViG~G~iG~~~a~~L~~~Ga-~V~v~~r~~~~~~~~~~~G~~~~-~~--------~~l~~~----l~~aDiVI~ 216 (296)
T PRK08306 151 HGSNVLVLGFGRTGMTLARTLKALGA-NVTVGARKSAHLARITEMGLSPF-HL--------SELAEE----VGKIDIIFN 216 (296)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeee-cH--------HHHHHH----hCCCCEEEE
Confidence 58999999999999999999999999 78888898888888888886532 11 112222 246999999
Q ss_pred cCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhcCcEEEE
Q 017793 263 CVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIG 309 (366)
Q Consensus 263 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 309 (366)
|++..-.....++.+++++.++.++..++...+ ...-...++..+
T Consensus 217 t~p~~~i~~~~l~~~~~g~vIIDla~~pggtd~--~~a~~~Gv~~~~ 261 (296)
T PRK08306 217 TIPALVLTKEVLSKMPPEALIIDLASKPGGTDF--EYAEKRGIKALL 261 (296)
T ss_pred CCChhhhhHHHHHcCCCCcEEEEEccCCCCcCe--eehhhCCeEEEE
Confidence 998553445667889999999988866655443 233334455543
No 139
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=98.11 E-value=1.8e-07 Score=88.39 Aligned_cols=159 Identities=18% Similarity=0.252 Sum_probs=102.9
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCC
Q 017793 78 VIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDN 157 (366)
Q Consensus 78 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~ 157 (366)
.-|.|+++.+.+|+++++. .|++-+.. ||+|.+| +..|.+....|. .-++.|++++.+.. .+..
T Consensus 89 ~~~~~a~~hl~~Va~GldS-----~V~GE~qI-~gQvk~a----~~~a~~~~~~g~-~l~~lf~~a~~~~k-~vr~---- 152 (417)
T TIGR01035 89 LTGESAVEHLFRVASGLDS-----MVVGETQI-LGQVKNA----YKVAQEEKTVGK-VLERLFQKAFSVGK-RVRT---- 152 (417)
T ss_pred cCchHHHHHHHHHHhhhhh-----hhcCChHH-HHHHHHH----HHHHHHcCCchH-HHHHHHHHHHHHhh-hhhh----
Confidence 3689999999999999876 55555566 8889888 333444433332 34678888887764 2211
Q ss_pred CCccccccchhhHHHHHHH----HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHH-HHHHcCCcee
Q 017793 158 VSLEEGAMCEPLSVGVHAC----RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADET 232 (366)
Q Consensus 158 ~~~~~aa~~~~~~~a~~~l----~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~~ 232 (366)
+....-.+.+.++.++ +.....++.+++|+|+|.+|..+++.++..|+..|++++++.++.+ ++++++...
T Consensus 153 ---~t~i~~~~vSv~~~Av~la~~~~~~l~~~~VlViGaG~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~~- 228 (417)
T TIGR01035 153 ---ETDISAGAVSISSAAVELAERIFGSLKGKKALLIGAGEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGEA- 228 (417)
T ss_pred ---hcCCCCCCcCHHHHHHHHHHHHhCCccCCEEEEECChHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCeE-
Confidence 1111011222233332 2333467899999999999999999999999768888888887754 777777632
Q ss_pred eecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChH
Q 017793 233 AKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDK 268 (366)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~ 268 (366)
+.+ . .+.+. -.++|+||+|++.+.
T Consensus 229 i~~-------~-~l~~~----l~~aDvVi~aT~s~~ 252 (417)
T TIGR01035 229 VKF-------E-DLEEY----LAEADIVISSTGAPH 252 (417)
T ss_pred eeH-------H-HHHHH----HhhCCEEEECCCCCC
Confidence 221 1 12222 136999999998764
No 140
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=98.00 E-value=8.7e-05 Score=69.23 Aligned_cols=101 Identities=24% Similarity=0.274 Sum_probs=76.3
Q ss_pred HHHHHh-CC-CCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHH
Q 017793 173 VHACRR-AN-VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQ 250 (366)
Q Consensus 173 ~~~l~~-~~-~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~ 250 (366)
+.++.+ .+ ...|++|+|+|.|.+|...++.++..|+ +|++++.++.+...+...|+.. .. ..+ ..
T Consensus 182 ~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~ak~~Ga-~ViV~d~dp~r~~~A~~~G~~v-~~-------lee----al 248 (406)
T TIGR00936 182 IDGILRATNLLIAGKTVVVAGYGWCGKGIAMRARGMGA-RVIVTEVDPIRALEAAMDGFRV-MT-------MEE----AA 248 (406)
T ss_pred HHHHHHhcCCCCCcCEEEEECCCHHHHHHHHHHhhCcC-EEEEEeCChhhHHHHHhcCCEe-CC-------HHH----HH
Confidence 444433 23 3689999999999999999999999999 6888988888777767667632 11 111 11
Q ss_pred HhhCCCCcEEEEcCCChHHHHH-HHHhhcCCceEEEEcccC
Q 017793 251 NAMGSGIDVSFDCVGFDKTMST-ALNATRPGGKVCLIGLAK 290 (366)
Q Consensus 251 ~~~~~~~d~vld~~g~~~~~~~-~~~~l~~~G~~v~~g~~~ 290 (366)
.+.|++|++.|....++. .+..+++++.++.+|...
T Consensus 249 ----~~aDVVItaTG~~~vI~~~~~~~mK~GailiN~G~~~ 285 (406)
T TIGR00936 249 ----KIGDIFITATGNKDVIRGEHFENMKDGAIVANIGHFD 285 (406)
T ss_pred ----hcCCEEEECCCCHHHHHHHHHhcCCCCcEEEEECCCC
Confidence 357999999998877764 788899999998887553
No 141
>PLN02494 adenosylhomocysteinase
Probab=97.82 E-value=0.00017 Score=67.96 Aligned_cols=101 Identities=23% Similarity=0.271 Sum_probs=76.6
Q ss_pred HHHHHh-CC-CCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHH
Q 017793 173 VHACRR-AN-VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQ 250 (366)
Q Consensus 173 ~~~l~~-~~-~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~ 250 (366)
+.++.+ .+ .-.|++++|.|.|.+|...++.++..|+ +|++++.++.+...+...|+... ...+ ..
T Consensus 241 ~d~i~r~t~i~LaGKtVvViGyG~IGr~vA~~aka~Ga-~VIV~e~dp~r~~eA~~~G~~vv--------~leE----al 307 (477)
T PLN02494 241 PDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKAAGA-RVIVTEIDPICALQALMEGYQVL--------TLED----VV 307 (477)
T ss_pred HHHHHHhcCCccCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhHHHHhcCCeec--------cHHH----HH
Confidence 445532 23 3579999999999999999999999999 78989888877666666776421 1111 21
Q ss_pred HhhCCCCcEEEEcCCChHH-HHHHHHhhcCCceEEEEcccC
Q 017793 251 NAMGSGIDVSFDCVGFDKT-MSTALNATRPGGKVCLIGLAK 290 (366)
Q Consensus 251 ~~~~~~~d~vld~~g~~~~-~~~~~~~l~~~G~~v~~g~~~ 290 (366)
..+|+++++.|+... ....+..|++++.++.+|...
T Consensus 308 ----~~ADVVI~tTGt~~vI~~e~L~~MK~GAiLiNvGr~~ 344 (477)
T PLN02494 308 ----SEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFD 344 (477)
T ss_pred ----hhCCEEEECCCCccchHHHHHhcCCCCCEEEEcCCCC
Confidence 258999999998765 477889999999999998643
No 142
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=97.80 E-value=4.8e-05 Score=72.28 Aligned_cols=159 Identities=19% Similarity=0.281 Sum_probs=99.5
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccCCCCCCCcceEEEEecCCceEECCCC
Q 017793 78 VIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDN 157 (366)
Q Consensus 78 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~P~~ 157 (366)
.-|+|+++.+.+|+++++..-+|+. .. +|+|.... ..|...+..+ ...++.|++. +++|+.
T Consensus 91 ~~g~ea~~hl~~V~~GldS~V~GE~-----qI-lgQvk~a~----~~a~~~g~~g-~~l~~lf~~a--------~~~~k~ 151 (423)
T PRK00045 91 HEGEEAVRHLFRVASGLDSMVLGEP-----QI-LGQVKDAY----ALAQEAGTVG-TILNRLFQKA--------FSVAKR 151 (423)
T ss_pred cCCHHHHHHHHHHHhhhhhhhcCCh-----HH-HHHHHHHH----HHHHHcCCch-HHHHHHHHHH--------HHHHhh
Confidence 3599999999999999887444443 22 34444111 1111111111 1123444443 344555
Q ss_pred CCccccccchhhHHHHHHHHhCC----CCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHH-HHHHcCCcee
Q 017793 158 VSLEEGAMCEPLSVGVHACRRAN----VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADET 232 (366)
Q Consensus 158 ~~~~~aa~~~~~~~a~~~l~~~~----~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~~ 232 (366)
+..+.+....+.++++.+++.+. -.++.+|+|+|+|.+|..+++.++..|+..+++++++.++.. +++++|.+ +
T Consensus 152 v~~~t~i~~~~~Sv~~~Av~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~-~ 230 (423)
T PRK00045 152 VRTETGIGAGAVSVASAAVELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGE-A 230 (423)
T ss_pred HhhhcCCCCCCcCHHHHHHHHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc-E
Confidence 55444444446677777775432 257899999999999999999999999878888888888755 77778753 2
Q ss_pred eecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChH
Q 017793 233 AKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDK 268 (366)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~ 268 (366)
+.+ ..+.+. -.++|+||+|++.+.
T Consensus 231 ~~~--------~~~~~~----l~~aDvVI~aT~s~~ 254 (423)
T PRK00045 231 IPL--------DELPEA----LAEADIVISSTGAPH 254 (423)
T ss_pred eeH--------HHHHHH----hccCCEEEECCCCCC
Confidence 221 111111 246999999998764
No 143
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=97.80 E-value=0.00019 Score=66.80 Aligned_cols=97 Identities=19% Similarity=0.353 Sum_probs=67.3
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEE
Q 017793 183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-NLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF 261 (366)
Q Consensus 183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl 261 (366)
++.+|+|+|+|.+|+.+++.++.+|+ .|+++++++++.+.+. .++......+ . + .+.+.+. -..+|++|
T Consensus 166 ~~~~VlViGaG~vG~~aa~~a~~lGa-~V~v~d~~~~~~~~l~~~~g~~v~~~~-~---~-~~~l~~~----l~~aDvVI 235 (370)
T TIGR00518 166 EPGDVTIIGGGVVGTNAAKMANGLGA-TVTILDINIDRLRQLDAEFGGRIHTRY-S---N-AYEIEDA----VKRADLLI 235 (370)
T ss_pred CCceEEEEcCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcCceeEecc-C---C-HHHHHHH----HccCCEEE
Confidence 34669999999999999999999999 6888988888877664 4554322111 1 1 1222222 24699999
Q ss_pred EcCCC-----hH-HHHHHHHhhcCCceEEEEccc
Q 017793 262 DCVGF-----DK-TMSTALNATRPGGKVCLIGLA 289 (366)
Q Consensus 262 d~~g~-----~~-~~~~~~~~l~~~G~~v~~g~~ 289 (366)
+|++. +. .....++.+++++.++.++..
T Consensus 236 ~a~~~~g~~~p~lit~~~l~~mk~g~vIvDva~d 269 (370)
T TIGR00518 236 GAVLIPGAKAPKLVSNSLVAQMKPGAVIVDVAID 269 (370)
T ss_pred EccccCCCCCCcCcCHHHHhcCCCCCEEEEEecC
Confidence 99832 11 135677889999999998743
No 144
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=97.80 E-value=0.0004 Score=58.91 Aligned_cols=102 Identities=17% Similarity=0.309 Sum_probs=71.5
Q ss_pred HHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHH----HcC-CceeeecCCCCcchHHHHHHH
Q 017793 176 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIAR----NLG-ADETAKVSTDIEDVDTDVGKI 249 (366)
Q Consensus 176 l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~----~lg-~~~~~~~~~~~~~~~~~~~~~ 249 (366)
+....+.++++||.+|+|. |.+++.+++..+. .++++++.+++..+.++ .++ .+.+..... +..+.+..
T Consensus 33 l~~l~~~~~~~vlDlG~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~~---d~~~~l~~- 107 (198)
T PRK00377 33 LSKLRLRKGDMILDIGCGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIKG---EAPEILFT- 107 (198)
T ss_pred HHHcCCCCcCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEEe---chhhhHhh-
Confidence 3567788999999999988 9999999987653 47999999998877654 356 333322222 22222222
Q ss_pred HHhhCCCCcEEEEcCCC---hHHHHHHHHhhcCCceEEE
Q 017793 250 QNAMGSGIDVSFDCVGF---DKTMSTALNATRPGGKVCL 285 (366)
Q Consensus 250 ~~~~~~~~d~vld~~g~---~~~~~~~~~~l~~~G~~v~ 285 (366)
....+|.||...+. ...+..+.+.|+++|+++.
T Consensus 108 ---~~~~~D~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~ 143 (198)
T PRK00377 108 ---INEKFDRIFIGGGSEKLKEIISASWEIIKKGGRIVI 143 (198)
T ss_pred ---cCCCCCEEEECCCcccHHHHHHHHHHHcCCCcEEEE
Confidence 13579999986543 3467788889999999875
No 145
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=97.72 E-value=2.9e-05 Score=76.75 Aligned_cols=81 Identities=21% Similarity=0.361 Sum_probs=57.4
Q ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCC---------------------hhHHHHHHHcCCceeeecCCC
Q 017793 180 NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD---------------------VQRLSIARNLGADETAKVSTD 238 (366)
Q Consensus 180 ~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~---------------------~~~~~~~~~lg~~~~~~~~~~ 238 (366)
..++|++|+|+|+|++|+++++.++..|+ .|++++.. +.+.+.++++|++..++...
T Consensus 133 ~~~~g~~V~VIGaGpaGL~aA~~l~~~G~-~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~- 210 (564)
T PRK12771 133 APDTGKRVAVIGGGPAGLSAAYHLRRMGH-AVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRV- 210 (564)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEE-
Confidence 36789999999999999999999999999 57777642 34667788899876544211
Q ss_pred CcchHHHHHHHHHhhCCCCcEEEEcCCChH
Q 017793 239 IEDVDTDVGKIQNAMGSGIDVSFDCVGFDK 268 (366)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~d~vld~~g~~~ 268 (366)
..+.. ...+ ..++|+||+++|...
T Consensus 211 ~~~~~--~~~~----~~~~D~Vi~AtG~~~ 234 (564)
T PRK12771 211 GEDIT--LEQL----EGEFDAVFVAIGAQL 234 (564)
T ss_pred CCcCC--HHHH----HhhCCEEEEeeCCCC
Confidence 01211 1112 236999999999763
No 146
>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function.
Probab=97.68 E-value=0.0034 Score=56.24 Aligned_cols=248 Identities=13% Similarity=0.109 Sum_probs=130.0
Q ss_pred eEEEEEeCCCCCCCCCCCEEEEcCCc-CCCCCccccCCCCCCCCCccccCC----CCCCCcceEEEEecCCceEECCCCC
Q 017793 84 AGIIEEVGSEVKSLEVGDRVALEPGI-SCGHCSLCKAGSYNLCPEMRFFGS----PPTNGSLAHKVVHPAKLCYKLPDNV 158 (366)
Q Consensus 84 ~G~V~~vG~~v~~~~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~----~~~~g~~~e~~~~~~~~~~~~P~~~ 158 (366)
-++|++ |+++++.+|.||..+... +.-.. .+..-+...|... ..-.-.|-+|.++..+..+.-
T Consensus 38 fA~Vve--S~~~~i~vGerlyGy~P~ashl~l------~p~~v~~~~f~d~s~hR~~l~~~YN~Y~r~~~d~~y~~---- 105 (314)
T PF11017_consen 38 FATVVE--SRHPGIAVGERLYGYFPMASHLVL------EPGKVSPGGFRDVSPHRAGLPPIYNQYLRVSADPAYDP---- 105 (314)
T ss_pred EEEEEe--eCCCCccCccEEEeeccccceeEE------eccccCCCccccChhhhCcCchhhhceeecCCCcccCc----
Confidence 356665 888899999999975322 11000 1111111112211 112345556666665443311
Q ss_pred Ccccc-ccchhhHHHHHHHHh----CCCCCCCEEEEEC-CCHHHHHHHHHHH-HCCCCeEEEEcCChhHHHHHHHcCC-c
Q 017793 159 SLEEG-AMCEPLSVGVHACRR----ANVGPETNVMIMG-SGPIGLVTLLAAR-AFGAPRIIITDVDVQRLSIARNLGA-D 230 (366)
Q Consensus 159 ~~~~a-a~~~~~~~a~~~l~~----~~~~~~~~vlI~G-~g~vG~~ai~la~-~~g~~~vv~v~~~~~~~~~~~~lg~-~ 230 (366)
+.+.. +++-++..+-..+.. .+.-..+.|+|.. ++-.++.....++ ..+..++|++ +|+.+..+.+.+|+ |
T Consensus 106 ~~e~~~~LlrPLf~Tsfll~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~vgl-TS~~N~~Fve~lg~Yd 184 (314)
T PF11017_consen 106 EREDWQMLLRPLFITSFLLDDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKVVGL-TSARNVAFVESLGCYD 184 (314)
T ss_pred chhHHHHHHHHHHHHHHHHHHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceEEEE-ecCcchhhhhccCCce
Confidence 22222 222244433333322 2233345677776 5777877777777 5555589999 56677779999995 6
Q ss_pred eeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCce-EEEEcccCCCce-------------ee
Q 017793 231 ETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGK-VCLIGLAKTEMT-------------VA 296 (366)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~-~v~~g~~~~~~~-------------~~ 296 (366)
+++.|++ +.++. ...--+++|..|..+....+.+++...=+ .+.+|....... ++
T Consensus 185 ~V~~Yd~--------i~~l~---~~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~th~~~~~~~~~l~g~~~~~FF 253 (314)
T PF11017_consen 185 EVLTYDD--------IDSLD---APQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGATHWDKVEAPADLPGPRPEFFF 253 (314)
T ss_pred EEeehhh--------hhhcc---CCCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEccCccccCccccCCCCCcEEEe
Confidence 6777643 22221 34567889999999888888888877544 445554332211 11
Q ss_pred chHhhhcCcEEEEeeccCCChHHHHHHHHCCCCCCCCceEEEecCChhhHHHHHHHHHcCCC
Q 017793 297 LTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGN 358 (366)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~ 358 (366)
....+.+++...|.....+.+.++++-..+.... --.+.+.-+. +.+.++++.+.+|+.
T Consensus 254 Ap~~~~kr~~~~G~~~~~~r~~~aw~~f~~~~~~-wl~~~~~~G~--ea~~~~y~~l~~G~v 312 (314)
T PF11017_consen 254 APDQIDKRIKEWGAAEFFQRMAAAWKRFAADAQP-WLKVEEVAGP--EAVEAAYQDLLAGKV 312 (314)
T ss_pred ChHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhcC-cEEEEEecCH--HHHHHHHHHHhcCCC
Confidence 1122222333333322222222222222222221 1223456677 999999999988753
No 147
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=97.63 E-value=0.0011 Score=54.50 Aligned_cols=101 Identities=22% Similarity=0.294 Sum_probs=71.1
Q ss_pred HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCceeeecCCCCcchHHHHHHHHHh
Q 017793 177 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR----NLGADETAKVSTDIEDVDTDVGKIQNA 252 (366)
Q Consensus 177 ~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~~~~~ 252 (366)
....+++|+.++=+|||. |..+++++..--..+++++++++++.+..+ +||.+.+.....+. .+.+.+
T Consensus 28 s~L~~~~g~~l~DIGaGt-Gsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~A---p~~L~~---- 99 (187)
T COG2242 28 SKLRPRPGDRLWDIGAGT-GSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGDA---PEALPD---- 99 (187)
T ss_pred HhhCCCCCCEEEEeCCCc-cHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEeccc---hHhhcC----
Confidence 457789999777788765 667788885444558999999999887664 58877654443332 233322
Q ss_pred hCCCCcEEEEcCCC--hHHHHHHHHhhcCCceEEEE
Q 017793 253 MGSGIDVSFDCVGF--DKTMSTALNATRPGGKVCLI 286 (366)
Q Consensus 253 ~~~~~d~vld~~g~--~~~~~~~~~~l~~~G~~v~~ 286 (366)
...+|.+|---|. ++.++.++..|+++|+++.-
T Consensus 100 -~~~~daiFIGGg~~i~~ile~~~~~l~~ggrlV~n 134 (187)
T COG2242 100 -LPSPDAIFIGGGGNIEEILEAAWERLKPGGRLVAN 134 (187)
T ss_pred -CCCCCEEEECCCCCHHHHHHHHHHHcCcCCeEEEE
Confidence 1268999864443 35788899999999999864
No 148
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.61 E-value=0.00089 Score=60.88 Aligned_cols=103 Identities=22% Similarity=0.282 Sum_probs=73.3
Q ss_pred HHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHH----HcCCceeeecCCCCcchHHHHHHH
Q 017793 175 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIAR----NLGADETAKVSTDIEDVDTDVGKI 249 (366)
Q Consensus 175 ~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~~ 249 (366)
.++...++++++||.+|+|. |..++.+++..+. ..|++++.+++..+.++ ++|.+.+..... +..+.+.
T Consensus 72 ll~~L~i~~g~~VLDIG~Gt-G~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~g---D~~~~~~-- 145 (322)
T PRK13943 72 FMEWVGLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVCG---DGYYGVP-- 145 (322)
T ss_pred HHHhcCCCCCCEEEEEeCCc-cHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeC---Chhhccc--
Confidence 44556788999999999984 9999999998764 36999999998765554 466654433222 2221111
Q ss_pred HHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEE
Q 017793 250 QNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLI 286 (366)
Q Consensus 250 ~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~ 286 (366)
....+|+|+.+.+.........+.|+++|+++..
T Consensus 146 ---~~~~fD~Ii~~~g~~~ip~~~~~~LkpgG~Lvv~ 179 (322)
T PRK13943 146 ---EFAPYDVIFVTVGVDEVPETWFTQLKEGGRVIVP 179 (322)
T ss_pred ---ccCCccEEEECCchHHhHHHHHHhcCCCCEEEEE
Confidence 1246999999888666667788999999998763
No 149
>TIGR00406 prmA ribosomal protein L11 methyltransferase. Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.
Probab=97.61 E-value=0.00052 Score=61.78 Aligned_cols=97 Identities=20% Similarity=0.298 Sum_probs=65.5
Q ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc----CCce-eeecCCCCcchHHHHHHHHHhhCC
Q 017793 181 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GADE-TAKVSTDIEDVDTDVGKIQNAMGS 255 (366)
Q Consensus 181 ~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 255 (366)
.+++++||-.|||. |..++.+++ .|+.++++++.++...+.+++. +... +..... +. . .....
T Consensus 157 ~~~g~~VLDvGcGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~---~~----~---~~~~~ 224 (288)
T TIGR00406 157 DLKDKNVIDVGCGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLI---YL----E---QPIEG 224 (288)
T ss_pred cCCCCEEEEeCCCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEec---cc----c---cccCC
Confidence 46789999999988 888877776 5777899999999887776653 2211 111111 10 0 01145
Q ss_pred CCcEEEEcCCCh---HHHHHHHHhhcCCceEEEEccc
Q 017793 256 GIDVSFDCVGFD---KTMSTALNATRPGGKVCLIGLA 289 (366)
Q Consensus 256 ~~d~vld~~g~~---~~~~~~~~~l~~~G~~v~~g~~ 289 (366)
+||+|+.+.... ..+..+.+.|+++|.++..|..
T Consensus 225 ~fDlVvan~~~~~l~~ll~~~~~~LkpgG~li~sgi~ 261 (288)
T TIGR00406 225 KADVIVANILAEVIKELYPQFSRLVKPGGWLILSGIL 261 (288)
T ss_pred CceEEEEecCHHHHHHHHHHHHHHcCCCcEEEEEeCc
Confidence 799999876543 3456678899999999887643
No 150
>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]
Probab=97.58 E-value=0.0011 Score=59.02 Aligned_cols=130 Identities=20% Similarity=0.298 Sum_probs=79.8
Q ss_pred CceEECCCCCCccccccchhhHHHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH--
Q 017793 149 KLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-- 226 (366)
Q Consensus 149 ~~~~~~P~~~~~~~aa~~~~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-- 226 (366)
..++++.+++.+-...-. +......++++. +++|.+||=.|||+ |.++|..+| +|+.+++++|.++...+.+++
T Consensus 130 ~~~i~lDPGlAFGTG~Hp-TT~lcL~~Le~~-~~~g~~vlDvGcGS-GILaIAa~k-LGA~~v~g~DiDp~AV~aa~eNa 205 (300)
T COG2264 130 ELNIELDPGLAFGTGTHP-TTSLCLEALEKL-LKKGKTVLDVGCGS-GILAIAAAK-LGAKKVVGVDIDPQAVEAARENA 205 (300)
T ss_pred ceEEEEccccccCCCCCh-hHHHHHHHHHHh-hcCCCEEEEecCCh-hHHHHHHHH-cCCceEEEecCCHHHHHHHHHHH
Confidence 556677666654332111 111223334433 56899999999887 888888877 588899999999977666554
Q ss_pred --cCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCCh---HHHHHHHHhhcCCceEEEEcccC
Q 017793 227 --LGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFD---KTMSTALNATRPGGKVCLIGLAK 290 (366)
Q Consensus 227 --lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~---~~~~~~~~~l~~~G~~v~~g~~~ 290 (366)
.+.+.. .... .-+. .... .++.||+|+.++=.. ........+++|+|++++.|...
T Consensus 206 ~~N~v~~~-~~~~-~~~~---~~~~---~~~~~DvIVANILA~vl~~La~~~~~~lkpgg~lIlSGIl~ 266 (300)
T COG2264 206 RLNGVELL-VQAK-GFLL---LEVP---ENGPFDVIVANILAEVLVELAPDIKRLLKPGGRLILSGILE 266 (300)
T ss_pred HHcCCchh-hhcc-cccc---hhhc---ccCcccEEEehhhHHHHHHHHHHHHHHcCCCceEEEEeehH
Confidence 233210 0000 0000 0011 146899999887543 24556778899999999988554
No 151
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.57 E-value=0.0022 Score=54.95 Aligned_cols=104 Identities=14% Similarity=0.203 Sum_probs=71.0
Q ss_pred HHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHH
Q 017793 174 HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGK 248 (366)
Q Consensus 174 ~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~ 248 (366)
..+...+++++++||-+|+|. |..+..+++..+. .+|++++.+++-.+.+++ +|...+.....+... ..
T Consensus 67 ~~~~~l~~~~g~~VLdIG~Gs-G~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~~~---~~-- 140 (212)
T PRK13942 67 IMCELLDLKEGMKVLEIGTGS-GYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDGTL---GY-- 140 (212)
T ss_pred HHHHHcCCCCcCEEEEECCcc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCccc---CC--
Confidence 344667789999999999876 7788888887764 389999999987766654 444332211111111 00
Q ss_pred HHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEE
Q 017793 249 IQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLI 286 (366)
Q Consensus 249 ~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~ 286 (366)
.....||.|+-............+.|+++|+++..
T Consensus 141 ---~~~~~fD~I~~~~~~~~~~~~l~~~LkpgG~lvi~ 175 (212)
T PRK13942 141 ---EENAPYDRIYVTAAGPDIPKPLIEQLKDGGIMVIP 175 (212)
T ss_pred ---CcCCCcCEEEECCCcccchHHHHHhhCCCcEEEEE
Confidence 01357999977655555677888999999998875
No 152
>PRK08324 short chain dehydrogenase; Validated
Probab=97.56 E-value=0.00078 Score=68.23 Aligned_cols=140 Identities=21% Similarity=0.306 Sum_probs=84.0
Q ss_pred CcceEEEEecCCceEECCCCCCccccccchhhHHHHHHHHhCCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcC
Q 017793 138 GSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDV 216 (366)
Q Consensus 138 g~~~e~~~~~~~~~~~~P~~~~~~~aa~~~~~~~a~~~l~~~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~ 216 (366)
-++.+|..+++..++.+ +.++.+++.... .-.....+|.++||.| +|++|...++.+...|+ .|+.+++
T Consensus 385 ~~~~~~~~l~~~~~f~i-~~~~~e~a~l~~--------~~~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga-~Vvl~~r 454 (681)
T PRK08324 385 EAVGRYEPLSEQEAFDI-EYWSLEQAKLQR--------MPKPKPLAGKVALVTGAAGGIGKATAKRLAAEGA-CVVLADL 454 (681)
T ss_pred hhcCCccCCChhhhcce-eeehhhhhhhhc--------CCCCcCCCCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEEeC
Confidence 45566777776666666 555555554210 0011223678999998 69999999999998999 6888888
Q ss_pred ChhHHHHH-HHcCC-cee----eecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCCh-----------------------
Q 017793 217 DVQRLSIA-RNLGA-DET----AKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFD----------------------- 267 (366)
Q Consensus 217 ~~~~~~~~-~~lg~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~----------------------- 267 (366)
+.++.+.+ ++++. ..+ .|. ++.....+.+.+.... .+++|++|++.|..
T Consensus 455 ~~~~~~~~~~~l~~~~~v~~v~~Dv-td~~~v~~~~~~~~~~-~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g 532 (681)
T PRK08324 455 DEEAAEAAAAELGGPDRALGVACDV-TDEAAVQAAFEEAALA-FGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATG 532 (681)
T ss_pred CHHHHHHHHHHHhccCcEEEEEecC-CCHHHHHHHHHHHHHH-cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHH
Confidence 87766544 33443 111 122 2222333333333322 34799999999831
Q ss_pred --HHHHHHHHhhcC---CceEEEEccc
Q 017793 268 --KTMSTALNATRP---GGKVCLIGLA 289 (366)
Q Consensus 268 --~~~~~~~~~l~~---~G~~v~~g~~ 289 (366)
...+.+++.+++ +|+++.++..
T Consensus 533 ~~~l~~~~~~~l~~~~~~g~iV~vsS~ 559 (681)
T PRK08324 533 HFLVAREAVRIMKAQGLGGSIVFIASK 559 (681)
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEECCc
Confidence 123344555555 6889988753
No 153
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=97.54 E-value=0.00044 Score=58.85 Aligned_cols=107 Identities=20% Similarity=0.276 Sum_probs=71.0
Q ss_pred HHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCC-eEEEEcCChhHHHHH----HHcCCceeeecCCCCcchHHH
Q 017793 171 VGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAP-RIIITDVDVQRLSIA----RNLGADETAKVSTDIEDVDTD 245 (366)
Q Consensus 171 ~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~-~vv~v~~~~~~~~~~----~~lg~~~~~~~~~~~~~~~~~ 245 (366)
.-..+++...+++|++||-+|+|. |..+.-+++..|.. .|++++..++-.+.+ .+++.+.+.....+ ....
T Consensus 60 ~~a~~l~~L~l~pg~~VLeIGtGs-GY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gd---g~~g 135 (209)
T PF01135_consen 60 MVARMLEALDLKPGDRVLEIGTGS-GYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGD---GSEG 135 (209)
T ss_dssp HHHHHHHHTTC-TT-EEEEES-TT-SHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES----GGGT
T ss_pred HHHHHHHHHhcCCCCEEEEecCCC-cHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcc---hhhc
Confidence 334456777899999999999877 88899999988753 589999888754444 44666543222221 1111
Q ss_pred HHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEE
Q 017793 246 VGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLI 286 (366)
Q Consensus 246 ~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~ 286 (366)
+ .....||.++-+.+.+......++.|++||+++..
T Consensus 136 ~-----~~~apfD~I~v~~a~~~ip~~l~~qL~~gGrLV~p 171 (209)
T PF01135_consen 136 W-----PEEAPFDRIIVTAAVPEIPEALLEQLKPGGRLVAP 171 (209)
T ss_dssp T-----GGG-SEEEEEESSBBSS--HHHHHTEEEEEEEEEE
T ss_pred c-----ccCCCcCEEEEeeccchHHHHHHHhcCCCcEEEEE
Confidence 1 11357999999888877778889999999999874
No 154
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=97.49 E-value=0.0032 Score=55.56 Aligned_cols=104 Identities=19% Similarity=0.363 Sum_probs=73.1
Q ss_pred HHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc-eeeecCCCCcchHHHHHHHH
Q 017793 176 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGAD-ETAKVSTDIEDVDTDVGKIQ 250 (366)
Q Consensus 176 l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~-~~~~~~~~~~~~~~~~~~~~ 250 (366)
+++.+++||++||=+|||- |-+++..|+..|+ .|++++.|++..+.+++ .|.. .+-....+ .+.+
T Consensus 65 ~~kl~L~~G~~lLDiGCGW-G~l~~~aA~~y~v-~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~d-------~rd~- 134 (283)
T COG2230 65 LEKLGLKPGMTLLDIGCGW-GGLAIYAAEEYGV-TVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQD-------YRDF- 134 (283)
T ss_pred HHhcCCCCCCEEEEeCCCh-hHHHHHHHHHcCC-EEEEeeCCHHHHHHHHHHHHHcCCCcccEEEecc-------cccc-
Confidence 3679999999999999987 8889999999999 79999999987776654 5554 21111111 1112
Q ss_pred HhhCCCCcEE-----EEcCCC---hHHHHHHHHhhcCCceEEEEcccCCC
Q 017793 251 NAMGSGIDVS-----FDCVGF---DKTMSTALNATRPGGKVCLIGLAKTE 292 (366)
Q Consensus 251 ~~~~~~~d~v-----ld~~g~---~~~~~~~~~~l~~~G~~v~~g~~~~~ 292 (366)
...||-| |+.+|. ++-+..+.+.|+++|++.+.......
T Consensus 135 ---~e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~G~~llh~I~~~~ 181 (283)
T COG2230 135 ---EEPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPGGRMLLHSITGPD 181 (283)
T ss_pred ---ccccceeeehhhHHHhCcccHHHHHHHHHhhcCCCceEEEEEecCCC
Confidence 2236665 445554 34677788899999999887655543
No 155
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=97.48 E-value=0.0013 Score=58.97 Aligned_cols=99 Identities=15% Similarity=0.187 Sum_probs=70.3
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793 183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD 262 (366)
Q Consensus 183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld 262 (366)
.|.+++|+|.|.+|.+++..++..|+ +|.+.++++++.+.+.++|...+ . + ..+.+. -..+|+|+.
T Consensus 150 ~gk~v~IiG~G~iG~avA~~L~~~G~-~V~v~~R~~~~~~~~~~~g~~~~-~-------~-~~l~~~----l~~aDiVin 215 (287)
T TIGR02853 150 HGSNVMVLGFGRTGMTIARTFSALGA-RVFVGARSSADLARITEMGLIPF-P-------L-NKLEEK----VAEIDIVIN 215 (287)
T ss_pred CCCEEEEEcChHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeee-c-------H-HHHHHH----hccCCEEEE
Confidence 47899999999999999999999998 78888888887776666665321 1 1 112222 247999999
Q ss_pred cCCChHHHHHHHHhhcCCceEEEEcccCCCcee
Q 017793 263 CVGFDKTMSTALNATRPGGKVCLIGLAKTEMTV 295 (366)
Q Consensus 263 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~ 295 (366)
+++..-.-...++.++++..++.++..+...++
T Consensus 216 t~P~~ii~~~~l~~~k~~aliIDlas~Pg~tdf 248 (287)
T TIGR02853 216 TIPALVLTADVLSKLPKHAVIIDLASKPGGTDF 248 (287)
T ss_pred CCChHHhCHHHHhcCCCCeEEEEeCcCCCCCCH
Confidence 997542224466778888888888765554443
No 156
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit. This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.
Probab=97.47 E-value=0.0036 Score=48.27 Aligned_cols=102 Identities=20% Similarity=0.289 Sum_probs=68.6
Q ss_pred HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHHHHh
Q 017793 177 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNA 252 (366)
Q Consensus 177 ~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~ 252 (366)
....+++++++|-+|+|. |..+..+++..+...+++++.++...+.+++ ++...+.....+... .+...
T Consensus 13 ~~~~~~~~~~vldlG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~---~~~~~--- 85 (124)
T TIGR02469 13 SKLRLRPGDVLWDIGAGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDAPE---ALEDS--- 85 (124)
T ss_pred HHcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEeccccc---cChhh---
Confidence 445677788999999987 8899999998755589999999987776543 444332211111111 01111
Q ss_pred hCCCCcEEEEcCCC---hHHHHHHHHhhcCCceEEEE
Q 017793 253 MGSGIDVSFDCVGF---DKTMSTALNATRPGGKVCLI 286 (366)
Q Consensus 253 ~~~~~d~vld~~g~---~~~~~~~~~~l~~~G~~v~~ 286 (366)
...+|.|+...+. ...++.+.+.|+++|.++..
T Consensus 86 -~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~li~~ 121 (124)
T TIGR02469 86 -LPEPDRVFIGGSGGLLQEILEAIWRRLRPGGRIVLN 121 (124)
T ss_pred -cCCCCEEEECCcchhHHHHHHHHHHHcCCCCEEEEE
Confidence 3579999876533 23678899999999998864
No 157
>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences. Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....
Probab=97.42 E-value=0.0006 Score=61.03 Aligned_cols=130 Identities=22% Similarity=0.406 Sum_probs=77.3
Q ss_pred cCCceEECCCCCCccccccchhhHHHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH
Q 017793 147 PAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN 226 (366)
Q Consensus 147 ~~~~~~~~P~~~~~~~aa~~~~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~ 226 (366)
+....+.+.+.+.+-..--. +...+...++.. .++|++||=+|+|. |+++|.-++ +|+.+|++++.++...+.+++
T Consensus 127 ~~~~~I~idPg~AFGTG~H~-TT~lcl~~l~~~-~~~g~~vLDvG~GS-GILaiaA~k-lGA~~v~a~DiDp~Av~~a~~ 202 (295)
T PF06325_consen 127 PDEIVIEIDPGMAFGTGHHP-TTRLCLELLEKY-VKPGKRVLDVGCGS-GILAIAAAK-LGAKKVVAIDIDPLAVEAARE 202 (295)
T ss_dssp TTSEEEEESTTSSS-SSHCH-HHHHHHHHHHHH-SSTTSEEEEES-TT-SHHHHHHHH-TTBSEEEEEESSCHHHHHHHH
T ss_pred CCcEEEEECCCCcccCCCCH-HHHHHHHHHHHh-ccCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEecCCHHHHHHHHH
Confidence 34456666666655444211 222233444444 67889999999766 777776666 599899999999987666554
Q ss_pred ----cCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCChH---HHHHHHHhhcCCceEEEEcccCC
Q 017793 227 ----LGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDK---TMSTALNATRPGGKVCLIGLAKT 291 (366)
Q Consensus 227 ----lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~---~~~~~~~~l~~~G~~v~~g~~~~ 291 (366)
.+...-+..... .+. ....||+|+.++-..- ......++|+++|.+++.|....
T Consensus 203 N~~~N~~~~~~~v~~~-~~~----------~~~~~dlvvANI~~~vL~~l~~~~~~~l~~~G~lIlSGIl~~ 263 (295)
T PF06325_consen 203 NAELNGVEDRIEVSLS-EDL----------VEGKFDLVVANILADVLLELAPDIASLLKPGGYLILSGILEE 263 (295)
T ss_dssp HHHHTT-TTCEEESCT-SCT----------CCS-EEEEEEES-HHHHHHHHHHCHHHEEEEEEEEEEEEEGG
T ss_pred HHHHcCCCeeEEEEEe-ccc----------ccccCCEEEECCCHHHHHHHHHHHHHhhCCCCEEEEccccHH
Confidence 333222211111 111 1367999999887553 34445667899999999886554
No 158
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=97.42 E-value=0.0012 Score=62.56 Aligned_cols=92 Identities=21% Similarity=0.276 Sum_probs=70.9
Q ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEE
Q 017793 181 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS 260 (366)
Q Consensus 181 ~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v 260 (366)
.-.|.+++|+|.|.+|...++.++..|+ +|++++.++.+...+...|+... ++ .++. ..+|+|
T Consensus 251 ~LaGKtVgVIG~G~IGr~vA~rL~a~Ga-~ViV~e~dp~~a~~A~~~G~~~~--------~l----eell----~~ADIV 313 (476)
T PTZ00075 251 MIAGKTVVVCGYGDVGKGCAQALRGFGA-RVVVTEIDPICALQAAMEGYQVV--------TL----EDVV----ETADIF 313 (476)
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHhcCceec--------cH----HHHH----hcCCEE
Confidence 3478999999999999999999999999 78888887776655555565321 12 2222 368999
Q ss_pred EEcCCChHHHH-HHHHhhcCCceEEEEccc
Q 017793 261 FDCVGFDKTMS-TALNATRPGGKVCLIGLA 289 (366)
Q Consensus 261 ld~~g~~~~~~-~~~~~l~~~G~~v~~g~~ 289 (366)
+.+.|+...++ ..+..|++++.++.+|..
T Consensus 314 I~atGt~~iI~~e~~~~MKpGAiLINvGr~ 343 (476)
T PTZ00075 314 VTATGNKDIITLEHMRRMKNNAIVGNIGHF 343 (476)
T ss_pred EECCCcccccCHHHHhccCCCcEEEEcCCC
Confidence 99999876664 788999999999988755
No 159
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.
Probab=97.38 E-value=0.0043 Score=53.34 Aligned_cols=104 Identities=15% Similarity=0.177 Sum_probs=69.2
Q ss_pred HHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHH----HcCCceeeecCCCCcchHHHHHH
Q 017793 174 HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIAR----NLGADETAKVSTDIEDVDTDVGK 248 (366)
Q Consensus 174 ~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~ 248 (366)
..++...++++++||-+|+|. |..++.+++..+. ..|++++.+++-.+.++ +++.+.+.....+ .....
T Consensus 68 ~~~~~l~~~~~~~VLDiG~Gs-G~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~d---~~~~~-- 141 (215)
T TIGR00080 68 MMTELLELKPGMKVLEIGTGS-GYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVGD---GTQGW-- 141 (215)
T ss_pred HHHHHhCCCCcCEEEEECCCc-cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEECC---cccCC--
Confidence 344566789999999999876 7777888887653 35999999988776654 3454433222111 11111
Q ss_pred HHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEE
Q 017793 249 IQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLI 286 (366)
Q Consensus 249 ~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~ 286 (366)
. ....||+|+-+...........+.|+++|+++..
T Consensus 142 -~--~~~~fD~Ii~~~~~~~~~~~~~~~L~~gG~lv~~ 176 (215)
T TIGR00080 142 -E--PLAPYDRIYVTAAGPKIPEALIDQLKEGGILVMP 176 (215)
T ss_pred -c--ccCCCCEEEEcCCcccccHHHHHhcCcCcEEEEE
Confidence 0 1357999886554455666788999999998864
No 160
>PRK14967 putative methyltransferase; Provisional
Probab=97.29 E-value=0.0058 Score=52.84 Aligned_cols=99 Identities=24% Similarity=0.332 Sum_probs=65.8
Q ss_pred HHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHHHH
Q 017793 176 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQN 251 (366)
Q Consensus 176 l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~ 251 (366)
+....++++++||-.|+|. |..++.+++. +..++++++.+++..+.+++ .+... ..+. .++... +
T Consensus 29 l~~~~~~~~~~vLDlGcG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~-~~~~---~d~~~~---~-- 97 (223)
T PRK14967 29 LAAEGLGPGRRVLDLCTGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDV-DVRR---GDWARA---V-- 97 (223)
T ss_pred HHhcccCCCCeEEEecCCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCee-EEEE---Cchhhh---c--
Confidence 4555678899999999987 8888888875 65589999999987776554 33321 1111 222221 1
Q ss_pred hhCCCCcEEEEcCCC---------------------------hHHHHHHHHhhcCCceEEEE
Q 017793 252 AMGSGIDVSFDCVGF---------------------------DKTMSTALNATRPGGKVCLI 286 (366)
Q Consensus 252 ~~~~~~d~vld~~g~---------------------------~~~~~~~~~~l~~~G~~v~~ 286 (366)
....||+|+...+- ...+..+.+.|+++|+++.+
T Consensus 98 -~~~~fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~gG~l~~~ 158 (223)
T PRK14967 98 -EFRPFDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPGGSLLLV 158 (223)
T ss_pred -cCCCeeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 13579999875320 11345677899999998865
No 161
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.27 E-value=0.0084 Score=51.08 Aligned_cols=103 Identities=15% Similarity=0.195 Sum_probs=68.7
Q ss_pred HHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHH----HcCCce-eeecCCCCcchHHHHHH
Q 017793 175 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIAR----NLGADE-TAKVSTDIEDVDTDVGK 248 (366)
Q Consensus 175 ~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~----~lg~~~-~~~~~~~~~~~~~~~~~ 248 (366)
.++...++++++||-+|+|. |..+..+++..+ ...|++++.+++-.+.++ +++... +.....+ ..+.+.
T Consensus 64 ~~~~l~~~~~~~VLDiG~Gs-G~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d---~~~~~~- 138 (205)
T PRK13944 64 MCELIEPRPGMKILEVGTGS-GYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGD---GKRGLE- 138 (205)
T ss_pred HHHhcCCCCCCEEEEECcCc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECC---cccCCc-
Confidence 34566788999999999876 888888888764 237999999988666554 344321 2111111 111110
Q ss_pred HHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEE
Q 017793 249 IQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLI 286 (366)
Q Consensus 249 ~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~ 286 (366)
....||.|+-+...........+.|++||+++..
T Consensus 139 ----~~~~fD~Ii~~~~~~~~~~~l~~~L~~gG~lvi~ 172 (205)
T PRK13944 139 ----KHAPFDAIIVTAAASTIPSALVRQLKDGGVLVIP 172 (205)
T ss_pred ----cCCCccEEEEccCcchhhHHHHHhcCcCcEEEEE
Confidence 1357999987766555667788999999998764
No 162
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.23 E-value=0.0019 Score=51.07 Aligned_cols=73 Identities=19% Similarity=0.294 Sum_probs=52.6
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCCc--eeeecCCCCcchHHHHHHHHHhhCCCCcE
Q 017793 183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGAD--ETAKVSTDIEDVDTDVGKIQNAMGSGIDV 259 (366)
Q Consensus 183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 259 (366)
.+.++||+|+|++|.+++..+...|++.+..+.++.+|.+.+ ++++.. ..+.+. ++. +. -..+|+
T Consensus 11 ~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~----~~~----~~----~~~~Di 78 (135)
T PF01488_consen 11 KGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLE----DLE----EA----LQEADI 78 (135)
T ss_dssp TTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGG----GHC----HH----HHTESE
T ss_pred CCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHH----HHH----HH----HhhCCe
Confidence 588999999999999999999999998899998998876644 556332 223321 121 11 136999
Q ss_pred EEEcCCCh
Q 017793 260 SFDCVGFD 267 (366)
Q Consensus 260 vld~~g~~ 267 (366)
++.|.+.+
T Consensus 79 vI~aT~~~ 86 (135)
T PF01488_consen 79 VINATPSG 86 (135)
T ss_dssp EEE-SSTT
T ss_pred EEEecCCC
Confidence 99998865
No 163
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=97.23 E-value=0.0015 Score=49.61 Aligned_cols=93 Identities=25% Similarity=0.398 Sum_probs=63.4
Q ss_pred CCCEEEEECCCHHHHHHHHHHHH-CCCCeEEEEcCChhHHHHHHHc----CC-ceeeecCCCCcchHHHHHHHHHhhCCC
Q 017793 183 PETNVMIMGSGPIGLVTLLAARA-FGAPRIIITDVDVQRLSIARNL----GA-DETAKVSTDIEDVDTDVGKIQNAMGSG 256 (366)
Q Consensus 183 ~~~~vlI~G~g~vG~~ai~la~~-~g~~~vv~v~~~~~~~~~~~~l----g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (366)
|+.+||-+|+|. |..++.+++. .++ ++++++.+++..+.+++. +. +.+..... ++ . .......+
T Consensus 1 p~~~vLDlGcG~-G~~~~~l~~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~---d~-~----~~~~~~~~ 70 (112)
T PF12847_consen 1 PGGRVLDLGCGT-GRLSIALARLFPGA-RVVGVDISPEMLEIARERAAEEGLSDRITFVQG---DA-E----FDPDFLEP 70 (112)
T ss_dssp TTCEEEEETTTT-SHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHHHHHTTTTTTEEEEES---CC-H----GGTTTSSC
T ss_pred CCCEEEEEcCcC-CHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEC---cc-c----cCcccCCC
Confidence 688999999887 8888888884 566 899999999988877653 22 22222212 22 1 11112457
Q ss_pred CcEEEEcC-CC---h------HHHHHHHHhhcCCceEEE
Q 017793 257 IDVSFDCV-GF---D------KTMSTALNATRPGGKVCL 285 (366)
Q Consensus 257 ~d~vld~~-g~---~------~~~~~~~~~l~~~G~~v~ 285 (366)
||+|+... .. . ..++.+.+.|+|+|+++.
T Consensus 71 ~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi 109 (112)
T PF12847_consen 71 FDLVICSGFTLHFLLPLDERRRVLERIRRLLKPGGRLVI 109 (112)
T ss_dssp EEEEEECSGSGGGCCHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCEEEECCCccccccchhHHHHHHHHHHHhcCCCcEEEE
Confidence 99999877 21 1 237788899999999875
No 164
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=97.21 E-value=0.0083 Score=51.44 Aligned_cols=80 Identities=26% Similarity=0.358 Sum_probs=56.9
Q ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHH-HHHcCCc----eeeecCCCCcchHHHHHHHHHhhCCCC
Q 017793 184 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARNLGAD----ETAKVSTDIEDVDTDVGKIQNAMGSGI 257 (366)
Q Consensus 184 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~lg~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (366)
+..++|.| ++++|.+..+.+...|+ +++.+.+.+++++. +.+++.. ...|. ++.....+.+..+.+ .-+.+
T Consensus 6 ~kv~lITGASSGiG~A~A~~l~~~G~-~vvl~aRR~drL~~la~~~~~~~~~~~~~DV-tD~~~~~~~i~~~~~-~~g~i 82 (246)
T COG4221 6 GKVALITGASSGIGEATARALAEAGA-KVVLAARREERLEALADEIGAGAALALALDV-TDRAAVEAAIEALPE-EFGRI 82 (246)
T ss_pred CcEEEEecCcchHHHHHHHHHHHCCC-eEEEEeccHHHHHHHHHhhccCceEEEeecc-CCHHHHHHHHHHHHH-hhCcc
Confidence 46788999 58999999999999999 78888899998874 4567732 22332 333444455555443 23579
Q ss_pred cEEEEcCCC
Q 017793 258 DVSFDCVGF 266 (366)
Q Consensus 258 d~vld~~g~ 266 (366)
|+.+++.|.
T Consensus 83 DiLvNNAGl 91 (246)
T COG4221 83 DILVNNAGL 91 (246)
T ss_pred cEEEecCCC
Confidence 999999875
No 165
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.16 E-value=0.0081 Score=50.16 Aligned_cols=113 Identities=17% Similarity=0.243 Sum_probs=74.9
Q ss_pred CCCEEEEECC--CHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcCCcee-eecCCCCcchHHHHHHHHHhhCCCCc
Q 017793 183 PETNVMIMGS--GPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-NLGADET-AKVSTDIEDVDTDVGKIQNAMGSGID 258 (366)
Q Consensus 183 ~~~~vlI~G~--g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d 258 (366)
....|||.|| |++|.+...-....|+ .|+++.++-++...+. ++|.... +|. ++.++..+...++.....++.|
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~-~V~AtaR~~e~M~~L~~~~gl~~~kLDV-~~~~~V~~v~~evr~~~~Gkld 83 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGY-LVYATARRLEPMAQLAIQFGLKPYKLDV-SKPEEVVTVSGEVRANPDGKLD 83 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCe-EEEEEccccchHhhHHHhhCCeeEEecc-CChHHHHHHHHHHhhCCCCceE
Confidence 3567899973 8999988877777899 8999988888887665 7775432 333 3444555555555554567899
Q ss_pred EEEEcCCCh----------HH--------------HHH--HHHhhcCCceEEEEcccCCCceeec
Q 017793 259 VSFDCVGFD----------KT--------------MST--ALNATRPGGKVCLIGLAKTEMTVAL 297 (366)
Q Consensus 259 ~vld~~g~~----------~~--------------~~~--~~~~l~~~G~~v~~g~~~~~~~~~~ 297 (366)
+.++..|.+ +. +.. .....+.-|+++.+|....-.+++.
T Consensus 84 ~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vpfpf 148 (289)
T KOG1209|consen 84 LLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVPFPF 148 (289)
T ss_pred EEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEeccch
Confidence 999988764 11 111 1223477899999886654444443
No 166
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=97.15 E-value=0.0015 Score=58.11 Aligned_cols=99 Identities=21% Similarity=0.402 Sum_probs=61.0
Q ss_pred HHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCceeeecCCCCcchHHHHHHHHH
Q 017793 176 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR----NLGADETAKVSTDIEDVDTDVGKIQN 251 (366)
Q Consensus 176 l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~~~~ 251 (366)
++++++++|++||-+|||- |-+++.+|+..|+ .|.+++.+++..++++ +.|....+.+.. .++. ++
T Consensus 55 ~~~~~l~~G~~vLDiGcGw-G~~~~~~a~~~g~-~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~--~D~~----~~-- 124 (273)
T PF02353_consen 55 CEKLGLKPGDRVLDIGCGW-GGLAIYAAERYGC-HVTGITLSEEQAEYARERIREAGLEDRVEVRL--QDYR----DL-- 124 (273)
T ss_dssp HTTTT--TT-EEEEES-TT-SHHHHHHHHHH---EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEE--S-GG----G---
T ss_pred HHHhCCCCCCEEEEeCCCc-cHHHHHHHHHcCc-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEE--eecc----cc--
Confidence 4678999999999999884 7788899998899 7999999998877765 355332111111 1221 12
Q ss_pred hhCCCCcEEE-----EcCCC---hHHHHHHHHhhcCCceEEEE
Q 017793 252 AMGSGIDVSF-----DCVGF---DKTMSTALNATRPGGKVCLI 286 (366)
Q Consensus 252 ~~~~~~d~vl-----d~~g~---~~~~~~~~~~l~~~G~~v~~ 286 (366)
...||.|+ +.+|. +..+..+.+.|+|+|++++-
T Consensus 125 --~~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~lq 165 (273)
T PF02353_consen 125 --PGKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPGGRLVLQ 165 (273)
T ss_dssp ----S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETTEEEEEE
T ss_pred --CCCCCEEEEEechhhcChhHHHHHHHHHHHhcCCCcEEEEE
Confidence 23788874 35543 24578888999999998764
No 167
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.10 E-value=0.016 Score=50.31 Aligned_cols=105 Identities=19% Similarity=0.201 Sum_probs=64.9
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcC---CceeeecC-CCCcchHHHHHHHHHhhCCC
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLG---ADETAKVS-TDIEDVDTDVGKIQNAMGSG 256 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 256 (366)
.++++||.| +|.+|..+++.+...|+ .|+.+++++++.+.+ +++. ....+..+ .+.......+++.... -++
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~ 81 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGA-QVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKV-LNA 81 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHH-hCC
Confidence 467999998 69999999999999999 677777877766544 3332 11222111 1122333333332221 246
Q ss_pred CcEEEEcCCCh-----------------------HHHHHHHHhhcCCceEEEEccc
Q 017793 257 IDVSFDCVGFD-----------------------KTMSTALNATRPGGKVCLIGLA 289 (366)
Q Consensus 257 ~d~vld~~g~~-----------------------~~~~~~~~~l~~~G~~v~~g~~ 289 (366)
+|.++.+.+.. ...+..+.++.++|+++.++..
T Consensus 82 id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~ 137 (238)
T PRK05786 82 IDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSM 137 (238)
T ss_pred CCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecc
Confidence 89999988742 1134455566778888888754
No 168
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=97.09 E-value=0.0059 Score=57.19 Aligned_cols=99 Identities=18% Similarity=0.288 Sum_probs=69.9
Q ss_pred HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCC
Q 017793 177 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSG 256 (366)
Q Consensus 177 ~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (366)
+...++++++||.+|+|. |..++.+++..|+ .|++++.+++..+.+++......+.+.. .++ ..+ .+.
T Consensus 161 ~~l~l~~g~rVLDIGcG~-G~~a~~la~~~g~-~V~giDlS~~~l~~A~~~~~~l~v~~~~--~D~----~~l----~~~ 228 (383)
T PRK11705 161 RKLQLKPGMRVLDIGCGW-GGLARYAAEHYGV-SVVGVTISAEQQKLAQERCAGLPVEIRL--QDY----RDL----NGQ 228 (383)
T ss_pred HHhCCCCCCEEEEeCCCc-cHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhccCeEEEEE--Cch----hhc----CCC
Confidence 567889999999999864 7788899998888 7999999999999887754221111111 121 111 356
Q ss_pred CcEEEE-----cCCC---hHHHHHHHHhhcCCceEEEEc
Q 017793 257 IDVSFD-----CVGF---DKTMSTALNATRPGGKVCLIG 287 (366)
Q Consensus 257 ~d~vld-----~~g~---~~~~~~~~~~l~~~G~~v~~g 287 (366)
+|.|+. .+|. ...+..+.+.|+|+|.++...
T Consensus 229 fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl~~ 267 (383)
T PRK11705 229 FDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLLHT 267 (383)
T ss_pred CCEEEEeCchhhCChHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 998864 3333 246778888999999988754
No 169
>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed
Probab=96.99 E-value=0.0089 Score=50.02 Aligned_cols=96 Identities=19% Similarity=0.268 Sum_probs=64.0
Q ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHHHHhhCCC
Q 017793 181 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAMGSG 256 (366)
Q Consensus 181 ~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (366)
++++.+||-+|||. |..++.+++......|++++.+++..+.+++ .+.+.+..... +.. ++.. ...
T Consensus 43 l~~g~~VLDiGcGt-G~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~i~~~~~---d~~----~~~~--~~~ 112 (187)
T PRK00107 43 LPGGERVLDVGSGA-GFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKNVTVVHG---RAE----EFGQ--EEK 112 (187)
T ss_pred cCCCCeEEEEcCCC-CHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCCEEEEec---cHh----hCCC--CCC
Confidence 55689999999876 7777777776544489999999987766543 45443222212 111 1111 357
Q ss_pred CcEEEEcCCC--hHHHHHHHHhhcCCceEEEE
Q 017793 257 IDVSFDCVGF--DKTMSTALNATRPGGKVCLI 286 (366)
Q Consensus 257 ~d~vld~~g~--~~~~~~~~~~l~~~G~~v~~ 286 (366)
+|+|+..... +..+..+.+.|+++|+++.+
T Consensus 113 fDlV~~~~~~~~~~~l~~~~~~LkpGG~lv~~ 144 (187)
T PRK00107 113 FDVVTSRAVASLSDLVELCLPLLKPGGRFLAL 144 (187)
T ss_pred ccEEEEccccCHHHHHHHHHHhcCCCeEEEEE
Confidence 9999874332 35677888999999999876
No 170
>PRK05993 short chain dehydrogenase; Provisional
Probab=96.99 E-value=0.0072 Score=54.06 Aligned_cols=82 Identities=18% Similarity=0.251 Sum_probs=55.0
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCcee-eecCCCCcchHHHHHHHHHhhCCCCcEE
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADET-AKVSTDIEDVDTDVGKIQNAMGSGIDVS 260 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~v 260 (366)
.+.++||.| +|++|...++.+...|+ .|+++++++++.+.+.+.+...+ .|+ ++..++...+.++.+..++.+|++
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~-~Vi~~~r~~~~~~~l~~~~~~~~~~Dl-~d~~~~~~~~~~~~~~~~g~id~l 80 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGW-RVFATCRKEEDVAALEAEGLEAFQLDY-AEPESIAALVAQVLELSGGRLDAL 80 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCceEEEccC-CCHHHHHHHHHHHHHHcCCCccEE
Confidence 356899998 59999998888888898 68888888887776666554432 232 222333344444433234579999
Q ss_pred EEcCCC
Q 017793 261 FDCVGF 266 (366)
Q Consensus 261 ld~~g~ 266 (366)
+.+.|.
T Consensus 81 i~~Ag~ 86 (277)
T PRK05993 81 FNNGAY 86 (277)
T ss_pred EECCCc
Confidence 998763
No 171
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=96.98 E-value=0.012 Score=48.88 Aligned_cols=88 Identities=22% Similarity=0.272 Sum_probs=59.3
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793 183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD 262 (366)
Q Consensus 183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld 262 (366)
.|.+|.|+|.|.+|...+++++..|+ +|++.+++.+........+... .++.+ +. ...|+|+.
T Consensus 35 ~g~tvgIiG~G~IG~~vA~~l~~fG~-~V~~~d~~~~~~~~~~~~~~~~--------~~l~e----ll----~~aDiv~~ 97 (178)
T PF02826_consen 35 RGKTVGIIGYGRIGRAVARRLKAFGM-RVIGYDRSPKPEEGADEFGVEY--------VSLDE----LL----AQADIVSL 97 (178)
T ss_dssp TTSEEEEESTSHHHHHHHHHHHHTT--EEEEEESSCHHHHHHHHTTEEE--------SSHHH----HH----HH-SEEEE
T ss_pred CCCEEEEEEEcCCcCeEeeeeecCCc-eeEEecccCChhhhccccccee--------eehhh----hc----chhhhhhh
Confidence 58999999999999999999999999 8999988887766445555421 12222 22 24789988
Q ss_pred cCCChH-----HHHHHHHhhcCCceEEEEc
Q 017793 263 CVGFDK-----TMSTALNATRPGGKVCLIG 287 (366)
Q Consensus 263 ~~g~~~-----~~~~~~~~l~~~G~~v~~g 287 (366)
+.+... .-...+..|+++..++-++
T Consensus 98 ~~plt~~T~~li~~~~l~~mk~ga~lvN~a 127 (178)
T PF02826_consen 98 HLPLTPETRGLINAEFLAKMKPGAVLVNVA 127 (178)
T ss_dssp -SSSSTTTTTSBSHHHHHTSTTTEEEEESS
T ss_pred hhccccccceeeeeeeeeccccceEEEecc
Confidence 776321 1224567788888776654
No 172
>TIGR00438 rrmJ cell division protein FtsJ.
Probab=96.91 E-value=0.019 Score=48.22 Aligned_cols=100 Identities=19% Similarity=0.291 Sum_probs=59.6
Q ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHHC-CCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCC
Q 017793 179 ANVGPETNVMIMGSGPIGLVTLLAARAF-GAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGI 257 (366)
Q Consensus 179 ~~~~~~~~vlI~G~g~vG~~ai~la~~~-g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (366)
..++++++||.+|+|.-+ .+..+++.. +..++++++.+++. +..+.. .+..+.........+.+.. ...++
T Consensus 28 ~~i~~g~~VLDiG~GtG~-~~~~l~~~~~~~~~v~~vDis~~~----~~~~i~-~~~~d~~~~~~~~~l~~~~--~~~~~ 99 (188)
T TIGR00438 28 KLIKPGDTVLDLGAAPGG-WSQVAVEQVGGKGRVIAVDLQPMK----PIENVD-FIRGDFTDEEVLNKIRERV--GDDKV 99 (188)
T ss_pred cccCCCCEEEEecCCCCH-HHHHHHHHhCCCceEEEEeccccc----cCCCce-EEEeeCCChhHHHHHHHHh--CCCCc
Confidence 567899999999988744 455555543 44479999998864 112332 1211111122222222221 24579
Q ss_pred cEEEEcC-----CC------------hHHHHHHHHhhcCCceEEEE
Q 017793 258 DVSFDCV-----GF------------DKTMSTALNATRPGGKVCLI 286 (366)
Q Consensus 258 d~vld~~-----g~------------~~~~~~~~~~l~~~G~~v~~ 286 (366)
|+|+... |. ...+..+.+.|+++|+++..
T Consensus 100 D~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~ 145 (188)
T TIGR00438 100 DVVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVK 145 (188)
T ss_pred cEEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEE
Confidence 9999531 21 24677788999999998875
No 173
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=96.86 E-value=0.013 Score=54.29 Aligned_cols=97 Identities=15% Similarity=0.216 Sum_probs=63.1
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCc--eeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793 185 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD--ETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD 262 (366)
Q Consensus 185 ~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld 262 (366)
.+|||+|+|.+|+.+++.+...+...|.+.+++.++...+.+.... +.+.++. .+.. .+.++. .++|+||+
T Consensus 2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~--~d~~-al~~li----~~~d~VIn 74 (389)
T COG1748 2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDA--ADVD-ALVALI----KDFDLVIN 74 (389)
T ss_pred CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecc--cChH-HHHHHH----hcCCEEEE
Confidence 4799999999999999998888855788888998888777665411 1222222 2222 233332 35699999
Q ss_pred cCCChHHHHHHHHhhcCCceEEEEcc
Q 017793 263 CVGFDKTMSTALNATRPGGKVCLIGL 288 (366)
Q Consensus 263 ~~g~~~~~~~~~~~l~~~G~~v~~g~ 288 (366)
+.+..-....+-.+++.+=.++.+..
T Consensus 75 ~~p~~~~~~i~ka~i~~gv~yvDts~ 100 (389)
T COG1748 75 AAPPFVDLTILKACIKTGVDYVDTSY 100 (389)
T ss_pred eCCchhhHHHHHHHHHhCCCEEEccc
Confidence 99976444444345555556666543
No 174
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]
Probab=96.84 E-value=0.021 Score=49.38 Aligned_cols=107 Identities=21% Similarity=0.406 Sum_probs=75.2
Q ss_pred HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc----CCceeeec-CCCCcchHHHHHHHHH
Q 017793 177 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GADETAKV-STDIEDVDTDVGKIQN 251 (366)
Q Consensus 177 ~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~~~~~~-~~~~~~~~~~~~~~~~ 251 (366)
.....++|++||=.|+|. |-.|+.+++..|-..|+++|-+++-++.+++- +... +.+ ..+.+++.
T Consensus 45 ~~~~~~~g~~vLDva~GT-Gd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~-i~fv~~dAe~LP-------- 114 (238)
T COG2226 45 SLLGIKPGDKVLDVACGT-GDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQN-VEFVVGDAENLP-------- 114 (238)
T ss_pred HhhCCCCCCEEEEecCCc-cHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccc-eEEEEechhhCC--------
Confidence 345566899999988766 89999999999866899999999988877652 2221 111 11111111
Q ss_pred hhCCCCcEEEEcCCC------hHHHHHHHHhhcCCceEEEEcccCCCc
Q 017793 252 AMGSGIDVSFDCVGF------DKTMSTALNATRPGGKVCLIGLAKTEM 293 (366)
Q Consensus 252 ~~~~~~d~vld~~g~------~~~~~~~~~~l~~~G~~v~~g~~~~~~ 293 (366)
.....||+|..+.|- +..+.+..+.|+|+|+++.+....+..
T Consensus 115 f~D~sFD~vt~~fglrnv~d~~~aL~E~~RVlKpgG~~~vle~~~p~~ 162 (238)
T COG2226 115 FPDNSFDAVTISFGLRNVTDIDKALKEMYRVLKPGGRLLVLEFSKPDN 162 (238)
T ss_pred CCCCccCEEEeeehhhcCCCHHHHHHHHHHhhcCCeEEEEEEcCCCCc
Confidence 125679999776654 247888999999999999987666543
No 175
>PRK07402 precorrin-6B methylase; Provisional
Probab=96.79 E-value=0.032 Score=47.10 Aligned_cols=104 Identities=13% Similarity=0.280 Sum_probs=64.1
Q ss_pred HHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHHHH
Q 017793 176 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQN 251 (366)
Q Consensus 176 l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~ 251 (366)
+....++++++||=.|+|. |..++.+++......+++++.+++..+.+++ ++.+.+..... +....+..+
T Consensus 33 ~~~l~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~~---d~~~~~~~~-- 106 (196)
T PRK07402 33 ISQLRLEPDSVLWDIGAGT-GTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIEG---SAPECLAQL-- 106 (196)
T ss_pred HHhcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEEC---chHHHHhhC--
Confidence 3456678899988888765 6667777776543489999999988776654 55543322222 222222111
Q ss_pred hhCCCCcE-EEEcCCC-hHHHHHHHHhhcCCceEEEEc
Q 017793 252 AMGSGIDV-SFDCVGF-DKTMSTALNATRPGGKVCLIG 287 (366)
Q Consensus 252 ~~~~~~d~-vld~~g~-~~~~~~~~~~l~~~G~~v~~g 287 (366)
...+|. .++.... ...+..+.+.|+++|+++...
T Consensus 107 --~~~~d~v~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 142 (196)
T PRK07402 107 --APAPDRVCIEGGRPIKEILQAVWQYLKPGGRLVATA 142 (196)
T ss_pred --CCCCCEEEEECCcCHHHHHHHHHHhcCCCeEEEEEe
Confidence 122344 4443222 356788889999999988763
No 176
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=96.79 E-value=0.043 Score=48.25 Aligned_cols=85 Identities=19% Similarity=0.201 Sum_probs=53.6
Q ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcC----Cc-eeeecCCCCcchHHHHHHHHHhhC
Q 017793 182 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-NLG----AD-ETAKVSTDIEDVDTDVGKIQNAMG 254 (366)
Q Consensus 182 ~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~lg----~~-~~~~~~~~~~~~~~~~~~~~~~~~ 254 (366)
..+.++||.| ++++|......+...|. .++.+.++++|++.+. ++. .. .++..+=..++-...+.......+
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~-~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~ 82 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGY-NLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERG 82 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcC
Confidence 4578999999 58999887777777898 6777889999887553 332 21 122221112222233332222234
Q ss_pred CCCcEEEEcCCCh
Q 017793 255 SGIDVSFDCVGFD 267 (366)
Q Consensus 255 ~~~d~vld~~g~~ 267 (366)
..+|+.+++.|..
T Consensus 83 ~~IdvLVNNAG~g 95 (265)
T COG0300 83 GPIDVLVNNAGFG 95 (265)
T ss_pred CcccEEEECCCcC
Confidence 5799999999875
No 177
>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]
Probab=96.73 E-value=0.036 Score=47.86 Aligned_cols=104 Identities=23% Similarity=0.380 Sum_probs=73.3
Q ss_pred HHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHH
Q 017793 175 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKI 249 (366)
Q Consensus 175 ~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~ 249 (366)
.+.+.++.||++|+=.|+|+ |.++.-||+..|- .+++..+..++..+.+++ +|....+.+.. .|..+..
T Consensus 86 I~~~~gi~pg~rVlEAGtGS-G~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~--~Dv~~~~--- 159 (256)
T COG2519 86 IVARLGISPGSRVLEAGTGS-GALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKL--GDVREGI--- 159 (256)
T ss_pred HHHHcCCCCCCEEEEcccCc-hHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEe--ccccccc---
Confidence 34668899999999999876 8889999998875 689999999988777654 45444222111 2222211
Q ss_pred HHhhCCCCcEEE-EcCCChHHHHHHHHhhcCCceEEEEc
Q 017793 250 QNAMGSGIDVSF-DCVGFDKTMSTALNATRPGGKVCLIG 287 (366)
Q Consensus 250 ~~~~~~~~d~vl-d~~g~~~~~~~~~~~l~~~G~~v~~g 287 (366)
-+..+|.++ |--.....++.+.+.|++||.++.+.
T Consensus 160 ---~~~~vDav~LDmp~PW~~le~~~~~Lkpgg~~~~y~ 195 (256)
T COG2519 160 ---DEEDVDAVFLDLPDPWNVLEHVSDALKPGGVVVVYS 195 (256)
T ss_pred ---cccccCEEEEcCCChHHHHHHHHHHhCCCcEEEEEc
Confidence 134788875 54444567889999999999998874
No 178
>PRK12742 oxidoreductase; Provisional
Probab=96.72 E-value=0.033 Score=48.34 Aligned_cols=101 Identities=21% Similarity=0.304 Sum_probs=59.1
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEE-cCChhHHH-HHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcE
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIIT-DVDVQRLS-IARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDV 259 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v-~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 259 (366)
.+.++||.| +|++|...++.+...|+ .++.+ .+++++.+ +..+++...+ ..+- .+..+ +.+.... .+++|+
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~-~~D~--~~~~~-~~~~~~~-~~~id~ 78 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGA-NVRFTYAGSKDAAERLAQETGATAV-QTDS--ADRDA-VIDVVRK-SGALDI 78 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHhCCeEE-ecCC--CCHHH-HHHHHHH-hCCCcE
Confidence 367899998 69999999988888899 45554 33444443 3345554322 2111 22222 2222221 246999
Q ss_pred EEEcCCChH-------------------------HHHHHHHhhcCCceEEEEccc
Q 017793 260 SFDCVGFDK-------------------------TMSTALNATRPGGKVCLIGLA 289 (366)
Q Consensus 260 vld~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~ 289 (366)
++++.|... ........+..+|+++.++..
T Consensus 79 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~ 133 (237)
T PRK12742 79 LVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSV 133 (237)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecc
Confidence 999987520 112334456677898887643
No 179
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=96.71 E-value=0.0067 Score=53.58 Aligned_cols=97 Identities=18% Similarity=0.322 Sum_probs=71.4
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793 183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD 262 (366)
Q Consensus 183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld 262 (366)
+..+|.|+|.|-+|.-|..+|--+|+ .|...+.+.+|+..++.+-..++..+.+...++.+.+ .++|++|.
T Consensus 167 ~~~kv~iiGGGvvgtnaAkiA~glgA-~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v--------~~aDlvIg 237 (371)
T COG0686 167 LPAKVVVLGGGVVGTNAAKIAIGLGA-DVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAV--------KKADLVIG 237 (371)
T ss_pred CCccEEEECCccccchHHHHHhccCC-eeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHh--------hhccEEEE
Confidence 34568888999999999999999999 6888899999999988765555433323222332222 46899998
Q ss_pred cCCCh------HHHHHHHHhhcCCceEEEEcc
Q 017793 263 CVGFD------KTMSTALNATRPGGKVCLIGL 288 (366)
Q Consensus 263 ~~g~~------~~~~~~~~~l~~~G~~v~~g~ 288 (366)
++-.+ -..++.++.|+||+.++.+..
T Consensus 238 aVLIpgakaPkLvt~e~vk~MkpGsVivDVAi 269 (371)
T COG0686 238 AVLIPGAKAPKLVTREMVKQMKPGSVIVDVAI 269 (371)
T ss_pred EEEecCCCCceehhHHHHHhcCCCcEEEEEEE
Confidence 76332 256677899999999998864
No 180
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=96.71 E-value=0.022 Score=48.75 Aligned_cols=95 Identities=21% Similarity=0.299 Sum_probs=66.4
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCcee--eecCCCCcchHHHHHHHHHhhCCCCcE
Q 017793 182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADET--AKVSTDIEDVDTDVGKIQNAMGSGIDV 259 (366)
Q Consensus 182 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~d~ 259 (366)
-+|-+||=.|||+ |+++.-+|+ .|+ .|.++|-+++..+.++.-..... ++|.. ..+.++.. .++.||+
T Consensus 58 l~g~~vLDvGCGg-G~Lse~mAr-~Ga-~VtgiD~se~~I~~Ak~ha~e~gv~i~y~~------~~~edl~~-~~~~FDv 127 (243)
T COG2227 58 LPGLRVLDVGCGG-GILSEPLAR-LGA-SVTGIDASEKPIEVAKLHALESGVNIDYRQ------ATVEDLAS-AGGQFDV 127 (243)
T ss_pred CCCCeEEEecCCc-cHhhHHHHH-CCC-eeEEecCChHHHHHHHHhhhhccccccchh------hhHHHHHh-cCCCccE
Confidence 3788999999887 888888887 588 89999999999998875332222 33432 22333433 2478999
Q ss_pred EEE-----cCCChH-HHHHHHHhhcCCceEEEE
Q 017793 260 SFD-----CVGFDK-TMSTALNATRPGGKVCLI 286 (366)
Q Consensus 260 vld-----~~g~~~-~~~~~~~~l~~~G~~v~~ 286 (366)
|++ .+..++ .+..+.+.++|+|.++.-
T Consensus 128 V~cmEVlEHv~dp~~~~~~c~~lvkP~G~lf~S 160 (243)
T COG2227 128 VTCMEVLEHVPDPESFLRACAKLVKPGGILFLS 160 (243)
T ss_pred EEEhhHHHccCCHHHHHHHHHHHcCCCcEEEEe
Confidence 965 555543 566788889999987654
No 181
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=96.69 E-value=0.0047 Score=50.80 Aligned_cols=100 Identities=19% Similarity=0.310 Sum_probs=65.1
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeee-cCCC--------------CcchHHHHH
Q 017793 183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAK-VSTD--------------IEDVDTDVG 247 (366)
Q Consensus 183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~-~~~~--------------~~~~~~~~~ 247 (366)
++-+|+|.|+|.+|..|+.+++.+|+ .++..+...++.+..+.+++..+.. +... .......+.
T Consensus 19 ~p~~vvv~G~G~vg~gA~~~~~~lGa-~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 97 (168)
T PF01262_consen 19 PPAKVVVTGAGRVGQGAAEIAKGLGA-EVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFA 97 (168)
T ss_dssp -T-EEEEESTSHHHHHHHHHHHHTT--EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHH
T ss_pred CCeEEEEECCCHHHHHHHHHHhHCCC-EEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHH
Confidence 34789999999999999999999999 7888889988888888887755433 1111 122222333
Q ss_pred HHHHhhCCCCcEEEEcCCCh------HHHHHHHHhhcCCceEEEEc
Q 017793 248 KIQNAMGSGIDVSFDCVGFD------KTMSTALNATRPGGKVCLIG 287 (366)
Q Consensus 248 ~~~~~~~~~~d~vld~~g~~------~~~~~~~~~l~~~G~~v~~g 287 (366)
+.. ..+|++|.+.-.+ -.....++.|+++..++.+.
T Consensus 98 ~~i----~~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis 139 (168)
T PF01262_consen 98 EFI----APADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDIS 139 (168)
T ss_dssp HHH----HH-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETT
T ss_pred HHH----hhCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEE
Confidence 222 3579988543211 12345668889888888875
No 182
>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed
Probab=96.68 E-value=0.05 Score=46.55 Aligned_cols=101 Identities=15% Similarity=0.118 Sum_probs=64.8
Q ss_pred HHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHHH
Q 017793 175 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQ 250 (366)
Q Consensus 175 ~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~ 250 (366)
.+...+++++++||-.|+|. |..+..+++.. . .+++++.+++..+.+++ ++.+.+.....+ ....+ .
T Consensus 70 l~~~l~~~~~~~VLeiG~Gs-G~~t~~la~~~-~-~v~~vd~~~~~~~~a~~~~~~~~~~~v~~~~~d---~~~~~---~ 140 (212)
T PRK00312 70 MTELLELKPGDRVLEIGTGS-GYQAAVLAHLV-R-RVFSVERIKTLQWEAKRRLKQLGLHNVSVRHGD---GWKGW---P 140 (212)
T ss_pred HHHhcCCCCCCEEEEECCCc-cHHHHHHHHHh-C-EEEEEeCCHHHHHHHHHHHHHCCCCceEEEECC---cccCC---C
Confidence 34567788999999999765 65666666654 3 79999998877665543 444332111111 11111 0
Q ss_pred HhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEE
Q 017793 251 NAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLI 286 (366)
Q Consensus 251 ~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~ 286 (366)
..+.||+|+.............+.|+++|+++..
T Consensus 141 --~~~~fD~I~~~~~~~~~~~~l~~~L~~gG~lv~~ 174 (212)
T PRK00312 141 --AYAPFDRILVTAAAPEIPRALLEQLKEGGILVAP 174 (212)
T ss_pred --cCCCcCEEEEccCchhhhHHHHHhcCCCcEEEEE
Confidence 1257999987655555667788999999998764
No 183
>PRK01581 speE spermidine synthase; Validated
Probab=96.54 E-value=0.039 Score=50.65 Aligned_cols=100 Identities=17% Similarity=0.106 Sum_probs=66.2
Q ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcC-----------CceeeecCCCCcchHHHHHHH
Q 017793 181 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLG-----------ADETAKVSTDIEDVDTDVGKI 249 (366)
Q Consensus 181 ~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg-----------~~~~~~~~~~~~~~~~~~~~~ 249 (366)
.....+|||+|+|. |.++..+++..+..+|.+++.+++-.+.++++. .+.+-... .|....++.
T Consensus 148 h~~PkrVLIIGgGd-G~tlrelLk~~~v~~It~VEIDpeVIelAr~~~~L~~~~~~~~~DpRV~vvi---~Da~~fL~~- 222 (374)
T PRK01581 148 VIDPKRVLILGGGD-GLALREVLKYETVLHVDLVDLDGSMINMARNVPELVSLNKSAFFDNRVNVHV---CDAKEFLSS- 222 (374)
T ss_pred CCCCCEEEEECCCH-HHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhccccchhccccCCCCceEEEE---CcHHHHHHh-
Confidence 34457999999764 667788888766678999999999999988631 11111111 233333322
Q ss_pred HHhhCCCCcEEEEcCCC-----------hHHHHHHHHhhcCCceEEEEcc
Q 017793 250 QNAMGSGIDVSFDCVGF-----------DKTMSTALNATRPGGKVCLIGL 288 (366)
Q Consensus 250 ~~~~~~~~d~vld~~g~-----------~~~~~~~~~~l~~~G~~v~~g~ 288 (366)
....+|+||--... .+.+..+.+.|+++|.++....
T Consensus 223 ---~~~~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPgGV~V~Qs~ 269 (374)
T PRK01581 223 ---PSSLYDVIIIDFPDPATELLSTLYTSELFARIATFLTEDGAFVCQSN 269 (374)
T ss_pred ---cCCCccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCCcEEEEecC
Confidence 25679999765422 2356778889999999887643
No 184
>PRK08017 oxidoreductase; Provisional
Probab=96.52 E-value=0.023 Score=49.99 Aligned_cols=80 Identities=23% Similarity=0.326 Sum_probs=53.2
Q ss_pred CEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCcee-eecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793 185 TNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADET-AKVSTDIEDVDTDVGKIQNAMGSGIDVSFD 262 (366)
Q Consensus 185 ~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~vld 262 (366)
.++||.| +|.+|...++.+...|+ .|+++.++.++.+.+++.++..+ .|+ .+..+....+..+....++.+|.++.
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~~~~~~ii~ 80 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGY-RVLAACRKPDDVARMNSLGFTGILLDL-DDPESVERAADEVIALTDNRLYGLFN 80 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHhHHHHhCCCeEEEeec-CCHHHHHHHHHHHHHhcCCCCeEEEE
Confidence 4799999 59999999999988898 68888888888877777775432 222 22222233333332222357888888
Q ss_pred cCCC
Q 017793 263 CVGF 266 (366)
Q Consensus 263 ~~g~ 266 (366)
+.|.
T Consensus 81 ~ag~ 84 (256)
T PRK08017 81 NAGF 84 (256)
T ss_pred CCCC
Confidence 8763
No 185
>PRK08317 hypothetical protein; Provisional
Probab=96.52 E-value=0.035 Score=48.16 Aligned_cols=103 Identities=21% Similarity=0.303 Sum_probs=68.9
Q ss_pred HHhCCCCCCCEEEEECCCHHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHHHcC---CceeeecCCCCcchHHHHHHHHH
Q 017793 176 CRRANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARNLG---ADETAKVSTDIEDVDTDVGKIQN 251 (366)
Q Consensus 176 l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~lg---~~~~~~~~~~~~~~~~~~~~~~~ 251 (366)
++...++++++||.+|+|. |..+..+++..+ ...+++++.+++..+.+++.. ...+.....+..++. +
T Consensus 12 ~~~~~~~~~~~vLdiG~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~-----~-- 83 (241)
T PRK08317 12 FELLAVQPGDRVLDVGCGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDADGLP-----F-- 83 (241)
T ss_pred HHHcCCCCCCEEEEeCCCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEecccccCC-----C--
Confidence 3567788999999999877 889999998874 347999999999888877651 111111111111110 1
Q ss_pred hhCCCCcEEEEcC-----CC-hHHHHHHHHhhcCCceEEEEc
Q 017793 252 AMGSGIDVSFDCV-----GF-DKTMSTALNATRPGGKVCLIG 287 (366)
Q Consensus 252 ~~~~~~d~vld~~-----g~-~~~~~~~~~~l~~~G~~v~~g 287 (366)
....+|+|+... .. ...+..+.++|+++|.++...
T Consensus 84 -~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 124 (241)
T PRK08317 84 -PDGSFDAVRSDRVLQHLEDPARALAEIARVLRPGGRVVVLD 124 (241)
T ss_pred -CCCCceEEEEechhhccCCHHHHHHHHHHHhcCCcEEEEEe
Confidence 135689887532 22 346778889999999998764
No 186
>PRK04457 spermidine synthase; Provisional
Probab=96.52 E-value=0.037 Score=49.05 Aligned_cols=96 Identities=16% Similarity=0.200 Sum_probs=66.3
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc-CC----ceeeecCCCCcchHHHHHHHHHhhCCC
Q 017793 182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL-GA----DETAKVSTDIEDVDTDVGKIQNAMGSG 256 (366)
Q Consensus 182 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l-g~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (366)
.++.+||++|+|+ |..+..+++.....++.+++.+++-.+.+++. +. +.+.... .|..+.+.. ....
T Consensus 65 ~~~~~vL~IG~G~-G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~---~Da~~~l~~----~~~~ 136 (262)
T PRK04457 65 PRPQHILQIGLGG-GSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIE---ADGAEYIAV----HRHS 136 (262)
T ss_pred CCCCEEEEECCCH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEE---CCHHHHHHh----CCCC
Confidence 4567899999876 88888888887655899999999999988774 32 1121111 233333332 2457
Q ss_pred CcEEE-EcCC---------ChHHHHHHHHhhcCCceEEE
Q 017793 257 IDVSF-DCVG---------FDKTMSTALNATRPGGKVCL 285 (366)
Q Consensus 257 ~d~vl-d~~g---------~~~~~~~~~~~l~~~G~~v~ 285 (366)
+|+|+ |... ..+.+..+.+.|+++|.++.
T Consensus 137 yD~I~~D~~~~~~~~~~l~t~efl~~~~~~L~pgGvlvi 175 (262)
T PRK04457 137 TDVILVDGFDGEGIIDALCTQPFFDDCRNALSSDGIFVV 175 (262)
T ss_pred CCEEEEeCCCCCCCccccCcHHHHHHHHHhcCCCcEEEE
Confidence 99996 3321 13678888999999999886
No 187
>PRK04148 hypothetical protein; Provisional
Probab=96.51 E-value=0.045 Score=42.74 Aligned_cols=91 Identities=12% Similarity=0.146 Sum_probs=63.8
Q ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCc
Q 017793 179 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGID 258 (366)
Q Consensus 179 ~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 258 (366)
..-+++.+++++|+| .|....+.+...|. .|+++|.+++..+.+++.+.+.+.+--. ++++ . + =.++|
T Consensus 12 ~~~~~~~kileIG~G-fG~~vA~~L~~~G~-~ViaIDi~~~aV~~a~~~~~~~v~dDlf-~p~~----~-~----y~~a~ 79 (134)
T PRK04148 12 YEKGKNKKIVELGIG-FYFKVAKKLKESGF-DVIVIDINEKAVEKAKKLGLNAFVDDLF-NPNL----E-I----YKNAK 79 (134)
T ss_pred cccccCCEEEEEEec-CCHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhCCeEEECcCC-CCCH----H-H----HhcCC
Confidence 333456889999998 78744445556798 8999999999999999888655433111 1221 1 1 25799
Q ss_pred EEEEcCCChHHHHHHHHhhcCCc
Q 017793 259 VSFDCVGFDKTMSTALNATRPGG 281 (366)
Q Consensus 259 ~vld~~g~~~~~~~~~~~l~~~G 281 (366)
+++..-..++....+++.-++-|
T Consensus 80 liysirpp~el~~~~~~la~~~~ 102 (134)
T PRK04148 80 LIYSIRPPRDLQPFILELAKKIN 102 (134)
T ss_pred EEEEeCCCHHHHHHHHHHHHHcC
Confidence 99999998888777777765444
No 188
>PRK00811 spermidine synthase; Provisional
Probab=96.50 E-value=0.02 Score=51.35 Aligned_cols=98 Identities=16% Similarity=0.143 Sum_probs=65.5
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC--------c-eeeecCCCCcchHHHHHHHHHh
Q 017793 182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA--------D-ETAKVSTDIEDVDTDVGKIQNA 252 (366)
Q Consensus 182 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~--------~-~~~~~~~~~~~~~~~~~~~~~~ 252 (366)
+.+++||++|+|. |..+..+++..+..+|.+++.+++-.+.++++-. + .+..+. .+....++.
T Consensus 75 ~~p~~VL~iG~G~-G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~---~Da~~~l~~---- 146 (283)
T PRK00811 75 PNPKRVLIIGGGD-GGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVI---GDGIKFVAE---- 146 (283)
T ss_pred CCCCEEEEEecCc-hHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEE---CchHHHHhh----
Confidence 4568999999876 7778888887777789999999998888876321 1 111111 233333322
Q ss_pred hCCCCcEEEEcCCC----------hHHHHHHHHhhcCCceEEEEc
Q 017793 253 MGSGIDVSFDCVGF----------DKTMSTALNATRPGGKVCLIG 287 (366)
Q Consensus 253 ~~~~~d~vld~~g~----------~~~~~~~~~~l~~~G~~v~~g 287 (366)
..+.+|+|+-.... .+.+..+.+.|+++|.++...
T Consensus 147 ~~~~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~gGvlv~~~ 191 (283)
T PRK00811 147 TENSFDVIIVDSTDPVGPAEGLFTKEFYENCKRALKEDGIFVAQS 191 (283)
T ss_pred CCCcccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEeC
Confidence 25679999764321 234567789999999988753
No 189
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.50 E-value=0.057 Score=52.00 Aligned_cols=81 Identities=16% Similarity=0.262 Sum_probs=49.2
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCCh--hH-HHHHHHcCCcee-eecCCCCcchHHHHHHHHHhhCCCC
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDV--QR-LSIARNLGADET-AKVSTDIEDVDTDVGKIQNAMGSGI 257 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~--~~-~~~~~~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (366)
++.++||.| +|++|...++.+...|+ +++.+++++ +. .+..++++...+ .|. ++.......+..+.+ ..+++
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~Ga-~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv-~~~~~~~~~~~~~~~-~~g~i 285 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARDGA-HVVCLDVPAAGEALAAVANRVGGTALALDI-TAPDAPARIAEHLAE-RHGGL 285 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHHHHHcCCeEEEEeC-CCHHHHHHHHHHHHH-hCCCC
Confidence 478899998 59999999998888899 577666532 22 233344554322 232 222223333333322 23479
Q ss_pred cEEEEcCCC
Q 017793 258 DVSFDCVGF 266 (366)
Q Consensus 258 d~vld~~g~ 266 (366)
|++|.+.|.
T Consensus 286 d~vi~~AG~ 294 (450)
T PRK08261 286 DIVVHNAGI 294 (450)
T ss_pred CEEEECCCc
Confidence 999999883
No 190
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.46 E-value=0.074 Score=47.21 Aligned_cols=109 Identities=24% Similarity=0.266 Sum_probs=63.2
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHH----HHHHcCCce-eeecC---CCCcchHHHHHHHHHhh
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS----IARNLGADE-TAKVS---TDIEDVDTDVGKIQNAM 253 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~----~~~~lg~~~-~~~~~---~~~~~~~~~~~~~~~~~ 253 (366)
.+..|+|.| ++++|.+.+.-.-..|+..+.++ +..++.+ .+++.+... ++.+. ++.++..+.+.++.. .
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~G~~l~lva-r~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~-~ 88 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKRGAKLVLVA-RRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIR-H 88 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCceEEee-hhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHH-h
Confidence 467889999 58999664444444688544444 5555444 445555444 33222 223333334333322 3
Q ss_pred CCCCcEEEEcCCCh-------------------------HHHHHHHHhhcCC--ceEEEEcccCCCc
Q 017793 254 GSGIDVSFDCVGFD-------------------------KTMSTALNATRPG--GKVCLIGLAKTEM 293 (366)
Q Consensus 254 ~~~~d~vld~~g~~-------------------------~~~~~~~~~l~~~--G~~v~~g~~~~~~ 293 (366)
-+++|+.+++.|-. .....++.+|++. |+++.++...+..
T Consensus 89 fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~ 155 (282)
T KOG1205|consen 89 FGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKM 155 (282)
T ss_pred cCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEecccccc
Confidence 56899999988754 1334456666444 9999987655433
No 191
>PRK00536 speE spermidine synthase; Provisional
Probab=96.42 E-value=0.017 Score=50.87 Aligned_cols=101 Identities=6% Similarity=-0.143 Sum_probs=67.0
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEE-
Q 017793 182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS- 260 (366)
Q Consensus 182 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v- 260 (366)
....+|||+|+|- |-++-.++|.- ++|..++-+++-.++++++-......++...-.+... ..+...+.+|+|
T Consensus 71 ~~pk~VLIiGGGD-Gg~~REvLkh~--~~v~mVeID~~Vv~~~k~~lP~~~~~~~DpRv~l~~~---~~~~~~~~fDVII 144 (262)
T PRK00536 71 KELKEVLIVDGFD-LELAHQLFKYD--THVDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQ---LLDLDIKKYDLII 144 (262)
T ss_pred CCCCeEEEEcCCc-hHHHHHHHCcC--CeeEEEECCHHHHHHHHHHCHHHHHhhcCCCEEEeeh---hhhccCCcCCEEE
Confidence 5569999999876 67888999985 3899999999988888883221000011111111111 222123579998
Q ss_pred EEcCCChHHHHHHHHhhcCCceEEEEcc
Q 017793 261 FDCVGFDKTMSTALNATRPGGKVCLIGL 288 (366)
Q Consensus 261 ld~~g~~~~~~~~~~~l~~~G~~v~~g~ 288 (366)
+|+.-+++....+.++|+++|.++.-+.
T Consensus 145 vDs~~~~~fy~~~~~~L~~~Gi~v~Qs~ 172 (262)
T PRK00536 145 CLQEPDIHKIDGLKRMLKEDGVFISVAK 172 (262)
T ss_pred EcCCCChHHHHHHHHhcCCCcEEEECCC
Confidence 4556667778889999999999988654
No 192
>PRK06182 short chain dehydrogenase; Validated
Probab=96.38 E-value=0.034 Score=49.52 Aligned_cols=81 Identities=23% Similarity=0.280 Sum_probs=53.8
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCcee-eecCCCCcchHHHHHHHHHhhCCCCcEE
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADET-AKVSTDIEDVDTDVGKIQNAMGSGIDVS 260 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~v 260 (366)
++.+++|.| +|.+|...++.+...|. .|+++++++++.+.+.+.+...+ .|. ++..++...+.++.+ ..+++|++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~Dv-~~~~~~~~~~~~~~~-~~~~id~l 78 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGY-TVYGAARRVDKMEDLASLGVHPLSLDV-TDEASIKAAVDTIIA-EEGRIDVL 78 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhCCCeEEEeeC-CCHHHHHHHHHHHHH-hcCCCCEE
Confidence 357899998 69999999988888898 68888788877665544443322 232 233344444444433 23579999
Q ss_pred EEcCCC
Q 017793 261 FDCVGF 266 (366)
Q Consensus 261 ld~~g~ 266 (366)
+++.|.
T Consensus 79 i~~ag~ 84 (273)
T PRK06182 79 VNNAGY 84 (273)
T ss_pred EECCCc
Confidence 999874
No 193
>PRK12828 short chain dehydrogenase; Provisional
Probab=96.38 E-value=0.096 Score=45.30 Aligned_cols=81 Identities=20% Similarity=0.171 Sum_probs=48.9
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHH-HHH---HcCCcee-eecCCCCcchHHHHHHHHHhhCCC
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IAR---NLGADET-AKVSTDIEDVDTDVGKIQNAMGSG 256 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~---~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 256 (366)
++.++||.| +|.+|...++.+...|+ +|+.++++.++.+ .+. ..+...+ .|. .+..++...+.++.+. -++
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~-~~~ 82 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGA-RVALIGRGAAPLSQTLPGVPADALRIGGIDL-VDPQAARRAVDEVNRQ-FGR 82 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCC-eEEEEeCChHhHHHHHHHHhhcCceEEEeec-CCHHHHHHHHHHHHHH-hCC
Confidence 367899998 69999998888888899 5788877665432 222 2333221 122 1222333333333321 247
Q ss_pred CcEEEEcCCC
Q 017793 257 IDVSFDCVGF 266 (366)
Q Consensus 257 ~d~vld~~g~ 266 (366)
+|+++.+.|.
T Consensus 83 ~d~vi~~ag~ 92 (239)
T PRK12828 83 LDALVNIAGA 92 (239)
T ss_pred cCEEEECCcc
Confidence 9999998774
No 194
>PRK05693 short chain dehydrogenase; Provisional
Probab=96.26 E-value=0.04 Score=49.06 Aligned_cols=79 Identities=22% Similarity=0.257 Sum_probs=52.6
Q ss_pred CEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCcee-eecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793 185 TNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADET-AKVSTDIEDVDTDVGKIQNAMGSGIDVSFD 262 (366)
Q Consensus 185 ~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~vld 262 (366)
.++||.| +|++|...++.+...|+ .|+++++++++.+.+.+.+...+ .|+ ++...+.+.+..+.+ ..+++|++++
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~Dl-~~~~~~~~~~~~~~~-~~~~id~vi~ 78 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGY-EVWATARKAEDVEALAAAGFTAVQLDV-NDGAALARLAEELEA-EHGGLDVLIN 78 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeEEEeeC-CCHHHHHHHHHHHHH-hcCCCCEEEE
Confidence 3689998 69999999988888898 68888888777766655554332 233 222333333333322 2357999999
Q ss_pred cCCC
Q 017793 263 CVGF 266 (366)
Q Consensus 263 ~~g~ 266 (366)
+.|.
T Consensus 79 ~ag~ 82 (274)
T PRK05693 79 NAGY 82 (274)
T ss_pred CCCC
Confidence 9983
No 195
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=96.24 E-value=0.083 Score=45.22 Aligned_cols=98 Identities=17% Similarity=0.188 Sum_probs=63.2
Q ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCCce---------------eeecCCCCcchHH
Q 017793 181 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGADE---------------TAKVSTDIEDVDT 244 (366)
Q Consensus 181 ~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~---------------~~~~~~~~~~~~~ 244 (366)
..++.+||+.|||. |.-++-+|. .|. .|++++.++.-.+.+ ++.+... +-.+.. |+.+
T Consensus 32 ~~~~~rvLd~GCG~-G~da~~LA~-~G~-~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~---D~~~ 105 (213)
T TIGR03840 32 LPAGARVFVPLCGK-SLDLAWLAE-QGH-RVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCG---DFFA 105 (213)
T ss_pred CCCCCeEEEeCCCc-hhHHHHHHh-CCC-eEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEc---cCCC
Confidence 36778999999987 888888886 598 799999999887764 3333210 000001 1100
Q ss_pred HHHHHHHhhCCCCcEEEEcCCC--------hHHHHHHHHhhcCCceEEEEcc
Q 017793 245 DVGKIQNAMGSGIDVSFDCVGF--------DKTMSTALNATRPGGKVCLIGL 288 (366)
Q Consensus 245 ~~~~~~~~~~~~~d~vld~~g~--------~~~~~~~~~~l~~~G~~v~~g~ 288 (366)
+.......||.++|+..- ...++.+.+.|+|+|+++++..
T Consensus 106 ----~~~~~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~ll~~~ 153 (213)
T TIGR03840 106 ----LTAADLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQLLITL 153 (213)
T ss_pred ----CCcccCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeEEEEEE
Confidence 100012468999996531 2356788899999998776653
No 196
>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []. ; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.
Probab=96.23 E-value=0.018 Score=50.30 Aligned_cols=108 Identities=27% Similarity=0.430 Sum_probs=66.5
Q ss_pred HHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHH
Q 017793 175 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKI 249 (366)
Q Consensus 175 ~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~ 249 (366)
.+...+++||++|+=.|+|+ |.++..+++..| -.+|+..+.++++.+.+++ +|.+..+.... .|..+.- .
T Consensus 32 I~~~l~i~pG~~VlEaGtGS-G~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~--~Dv~~~g--~ 106 (247)
T PF08704_consen 32 ILMRLDIRPGSRVLEAGTGS-GSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHH--RDVCEEG--F 106 (247)
T ss_dssp HHHHTT--TT-EEEEE--TT-SHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEE--S-GGCG----
T ss_pred HHHHcCCCCCCEEEEecCCc-HHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEe--cceeccc--c
Confidence 34668899999999998766 778888888776 3489999999998877754 56543222111 1221110 0
Q ss_pred HHhhCCCCcEEE-EcCCChHHHHHHHHhh-cCCceEEEEc
Q 017793 250 QNAMGSGIDVSF-DCVGFDKTMSTALNAT-RPGGKVCLIG 287 (366)
Q Consensus 250 ~~~~~~~~d~vl-d~~g~~~~~~~~~~~l-~~~G~~v~~g 287 (366)
.+.....+|.|| |--.....+..+.+.| ++||+++.+.
T Consensus 107 ~~~~~~~~DavfLDlp~Pw~~i~~~~~~L~~~gG~i~~fs 146 (247)
T PF08704_consen 107 DEELESDFDAVFLDLPDPWEAIPHAKRALKKPGGRICCFS 146 (247)
T ss_dssp STT-TTSEEEEEEESSSGGGGHHHHHHHE-EEEEEEEEEE
T ss_pred cccccCcccEEEEeCCCHHHHHHHHHHHHhcCCceEEEEC
Confidence 000135688885 5444345788999999 8999999885
No 197
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=96.22 E-value=0.041 Score=45.87 Aligned_cols=82 Identities=21% Similarity=0.332 Sum_probs=54.9
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCc---eeeecCCCCcchHHHHHHHHHhhCCCCc
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD---ETAKVSTDIEDVDTDVGKIQNAMGSGID 258 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~d 258 (366)
.|.+|||.| ++++|+...+-...+|= .||.+.+++++++.+++...+ .+.|. .+.....+.+.++.+.. ...|
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN-~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv-~d~~~~~~lvewLkk~~-P~lN 80 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGN-TVIICGRNEERLAEAKAENPEIHTEVCDV-ADRDSRRELVEWLKKEY-PNLN 80 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCC-EEEEecCcHHHHHHHHhcCcchheeeecc-cchhhHHHHHHHHHhhC-Cchh
Confidence 478999997 78999988887777886 788888999999988875432 23333 22223333333333322 3478
Q ss_pred EEEEcCCCh
Q 017793 259 VSFDCVGFD 267 (366)
Q Consensus 259 ~vld~~g~~ 267 (366)
+++++.|-.
T Consensus 81 vliNNAGIq 89 (245)
T COG3967 81 VLINNAGIQ 89 (245)
T ss_pred eeeeccccc
Confidence 998888753
No 198
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=96.22 E-value=0.098 Score=44.40 Aligned_cols=34 Identities=32% Similarity=0.536 Sum_probs=30.5
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCC
Q 017793 184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD 217 (366)
Q Consensus 184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~ 217 (366)
..+|+|.|+|++|..+++.+...|+..+..+|.+
T Consensus 21 ~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d 54 (202)
T TIGR02356 21 NSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDD 54 (202)
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCC
Confidence 5789999999999999999999999889988866
No 199
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=96.21 E-value=0.044 Score=45.44 Aligned_cols=91 Identities=14% Similarity=0.190 Sum_probs=58.2
Q ss_pred EEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCC
Q 017793 187 VMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVG 265 (366)
Q Consensus 187 vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g 265 (366)
|+|.| +|.+|...++.+...|. .|.++.+++++.+. ..+... +..+- .+. ..+.+.. .++|.||.++|
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~-~V~~~~R~~~~~~~--~~~~~~-~~~d~--~d~-~~~~~al----~~~d~vi~~~~ 69 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGH-EVTALVRSPSKAED--SPGVEI-IQGDL--FDP-DSVKAAL----KGADAVIHAAG 69 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTS-EEEEEESSGGGHHH--CTTEEE-EESCT--TCH-HHHHHHH----TTSSEEEECCH
T ss_pred eEEECCCChHHHHHHHHHHHCCC-EEEEEecCchhccc--cccccc-ceeee--hhh-hhhhhhh----hhcchhhhhhh
Confidence 68999 59999999999999997 78888788887665 333332 22211 222 2233322 37999999998
Q ss_pred C----hHHHHHHHHhhcCCc--eEEEEcc
Q 017793 266 F----DKTMSTALNATRPGG--KVCLIGL 288 (366)
Q Consensus 266 ~----~~~~~~~~~~l~~~G--~~v~~g~ 288 (366)
. .......++.++..| +++.++.
T Consensus 70 ~~~~~~~~~~~~~~a~~~~~~~~~v~~s~ 98 (183)
T PF13460_consen 70 PPPKDVDAAKNIIEAAKKAGVKRVVYLSS 98 (183)
T ss_dssp STTTHHHHHHHHHHHHHHTTSSEEEEEEE
T ss_pred hhcccccccccccccccccccccceeeec
Confidence 4 223445555554433 6776654
No 200
>TIGR00446 nop2p NOL1/NOP2/sun family putative RNA methylase.
Probab=96.19 E-value=0.18 Score=44.77 Aligned_cols=99 Identities=20% Similarity=0.274 Sum_probs=62.8
Q ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHH----HcCCceeeecCCCCcchHHHHHHHHHhh
Q 017793 179 ANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIAR----NLGADETAKVSTDIEDVDTDVGKIQNAM 253 (366)
Q Consensus 179 ~~~~~~~~vlI~G~g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (366)
...++|++||=.|||+ |..++.++..++ ...|++++.++++.+.++ .+|.+.+.....+..++ .. .
T Consensus 67 l~~~~g~~VLDl~ag~-G~kt~~la~~~~~~g~v~a~D~~~~~l~~~~~n~~~~g~~~v~~~~~D~~~~----~~----~ 137 (264)
T TIGR00446 67 LEPDPPERVLDMAAAP-GGKTTQISALMKNEGAIVANEFSKSRTKVLIANINRCGVLNVAVTNFDGRVF----GA----A 137 (264)
T ss_pred hCCCCcCEEEEECCCc-hHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEecCCHHHh----hh----h
Confidence 4578999998888766 656666676653 237999999999887664 45655433222221111 11 1
Q ss_pred CCCCcEEEE---cCCC-------------------------hHHHHHHHHhhcCCceEEEE
Q 017793 254 GSGIDVSFD---CVGF-------------------------DKTMSTALNATRPGGKVCLI 286 (366)
Q Consensus 254 ~~~~d~vld---~~g~-------------------------~~~~~~~~~~l~~~G~~v~~ 286 (366)
...||.|+- |.|. ...+..+++.|+++|+++..
T Consensus 138 ~~~fD~Vl~D~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~lkpgG~lvYs 198 (264)
T TIGR00446 138 VPKFDAILLDAPCSGEGVIRKDPSRKKNWSEEDIQEISALQKELIDSAFDALKPGGVLVYS 198 (264)
T ss_pred ccCCCEEEEcCCCCCCcccccChhhhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 235999964 3442 12566778889999998754
No 201
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=96.18 E-value=0.087 Score=51.53 Aligned_cols=46 Identities=20% Similarity=0.256 Sum_probs=37.1
Q ss_pred HhCCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHH
Q 017793 177 RRANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI 223 (366)
Q Consensus 177 ~~~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~ 223 (366)
+..+.+.|.++||.| +|.+|...++.+...|. .|+++.++.++.+.
T Consensus 73 ~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~-~Vval~Rn~ekl~~ 119 (576)
T PLN03209 73 KELDTKDEDLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSAQRAES 119 (576)
T ss_pred cccccCCCCEEEEECCCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHH
Confidence 456778899999998 69999999888888898 67777777776543
No 202
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=96.17 E-value=0.076 Score=48.30 Aligned_cols=91 Identities=24% Similarity=0.342 Sum_probs=60.8
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEc
Q 017793 185 TNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDC 263 (366)
Q Consensus 185 ~~vlI~G~g~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~ 263 (366)
.+|.|+|+|.+|....+.++..|. ..|++.++++++.+.+++.|...... .+..+ . -..+|+|+.|
T Consensus 7 ~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~-----~~~~~----~----~~~aDvViia 73 (307)
T PRK07502 7 DRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVT-----TSAAE----A----VKGADLVILC 73 (307)
T ss_pred cEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceec-----CCHHH----H----hcCCCEEEEC
Confidence 579999999999998888887775 36888899998888888877532111 11111 1 1468999999
Q ss_pred CCChHH---HHHHHHhhcCCceEEEEcc
Q 017793 264 VGFDKT---MSTALNATRPGGKVCLIGL 288 (366)
Q Consensus 264 ~g~~~~---~~~~~~~l~~~G~~v~~g~ 288 (366)
+..... .......++++..++.++.
T Consensus 74 vp~~~~~~v~~~l~~~l~~~~iv~dvgs 101 (307)
T PRK07502 74 VPVGASGAVAAEIAPHLKPGAIVTDVGS 101 (307)
T ss_pred CCHHHHHHHHHHHHhhCCCCCEEEeCcc
Confidence 986432 2233345566666666553
No 203
>PRK08618 ornithine cyclodeaminase; Validated
Probab=96.16 E-value=0.12 Score=47.33 Aligned_cols=100 Identities=12% Similarity=0.141 Sum_probs=65.8
Q ss_pred HhCCCCCCCEEEEECCCHHHHHHHHH-HHHCCCCeEEEEcCChhHHH-HHHHc----CCceeeecCCCCcchHHHHHHHH
Q 017793 177 RRANVGPETNVMIMGSGPIGLVTLLA-ARAFGAPRIIITDVDVQRLS-IARNL----GADETAKVSTDIEDVDTDVGKIQ 250 (366)
Q Consensus 177 ~~~~~~~~~~vlI~G~g~vG~~ai~l-a~~~g~~~vv~v~~~~~~~~-~~~~l----g~~~~~~~~~~~~~~~~~~~~~~ 250 (366)
+...-+...+++|+|+|..|.+.+.. +...+++.|.+.++++++.+ +++++ +... ..+ .+..+.+
T Consensus 120 ~~la~~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~-~~~----~~~~~~~---- 190 (325)
T PRK08618 120 KYLAREDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEI-YVV----NSADEAI---- 190 (325)
T ss_pred HHhcCCCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcE-EEe----CCHHHHH----
Confidence 43333456789999999999776654 44568888999999888765 33333 3321 112 1222222
Q ss_pred HhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCC
Q 017793 251 NAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT 291 (366)
Q Consensus 251 ~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 291 (366)
...|+|+.|.+.. +.... +.+++|-++..+|...+
T Consensus 191 ----~~aDiVi~aT~s~-~p~i~-~~l~~G~hV~~iGs~~p 225 (325)
T PRK08618 191 ----EEADIIVTVTNAK-TPVFS-EKLKKGVHINAVGSFMP 225 (325)
T ss_pred ----hcCCEEEEccCCC-CcchH-HhcCCCcEEEecCCCCc
Confidence 4689999999876 33334 88999999989986543
No 204
>PRK11207 tellurite resistance protein TehB; Provisional
Probab=96.15 E-value=0.082 Score=44.67 Aligned_cols=98 Identities=16% Similarity=0.237 Sum_probs=62.6
Q ss_pred HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc----CCceeeecCCCCcchHHHHHHHHHh
Q 017793 177 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GADETAKVSTDIEDVDTDVGKIQNA 252 (366)
Q Consensus 177 ~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~~ 252 (366)
+.....++.+||-+|||. |..+..+++. |. .|++++.+++-.+.+++. +...+.... .++. +..
T Consensus 24 ~~l~~~~~~~vLDiGcG~-G~~a~~La~~-g~-~V~gvD~S~~~i~~a~~~~~~~~~~~v~~~~---~d~~----~~~-- 91 (197)
T PRK11207 24 EAVKVVKPGKTLDLGCGN-GRNSLYLAAN-GF-DVTAWDKNPMSIANLERIKAAENLDNLHTAV---VDLN----NLT-- 91 (197)
T ss_pred HhcccCCCCcEEEECCCC-CHHHHHHHHC-CC-EEEEEeCCHHHHHHHHHHHHHcCCCcceEEe---cChh----hCC--
Confidence 334456778999999887 8888888885 77 799999999876665542 222111100 1111 111
Q ss_pred hCCCCcEEEEcCC----C----hHHHHHHHHhhcCCceEEEE
Q 017793 253 MGSGIDVSFDCVG----F----DKTMSTALNATRPGGKVCLI 286 (366)
Q Consensus 253 ~~~~~d~vld~~g----~----~~~~~~~~~~l~~~G~~v~~ 286 (366)
....||+|+.+.. . ...+..+.+.|+++|.++.+
T Consensus 92 ~~~~fD~I~~~~~~~~~~~~~~~~~l~~i~~~LkpgG~~~~~ 133 (197)
T PRK11207 92 FDGEYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIV 133 (197)
T ss_pred cCCCcCEEEEecchhhCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 1346999987543 1 24566788889999996554
No 205
>PLN03075 nicotianamine synthase; Provisional
Probab=96.15 E-value=0.053 Score=48.49 Aligned_cols=98 Identities=24% Similarity=0.270 Sum_probs=66.2
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHHHcC-C----ceeeecCCCCcchHHHHHHHHHhhCC
Q 017793 182 GPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARNLG-A----DETAKVSTDIEDVDTDVGKIQNAMGS 255 (366)
Q Consensus 182 ~~~~~vlI~G~g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~lg-~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (366)
.++++|+-+|+|+.+..++.+++... ..+++++|.+++..+.++++- . ..-+.+.. .+..+ ... ..+
T Consensus 122 ~~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~--~Da~~----~~~-~l~ 194 (296)
T PLN03075 122 GVPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHT--ADVMD----VTE-SLK 194 (296)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEE--Cchhh----ccc-ccC
Confidence 47899999999999999988887553 347999999999888887643 1 11122211 11111 110 125
Q ss_pred CCcEEEEcC------CC-hHHHHHHHHhhcCCceEEEE
Q 017793 256 GIDVSFDCV------GF-DKTMSTALNATRPGGKVCLI 286 (366)
Q Consensus 256 ~~d~vld~~------g~-~~~~~~~~~~l~~~G~~v~~ 286 (366)
+||+||..+ .. ...+....+.|++||.++.=
T Consensus 195 ~FDlVF~~ALi~~dk~~k~~vL~~l~~~LkPGG~Lvlr 232 (296)
T PLN03075 195 EYDVVFLAALVGMDKEEKVKVIEHLGKHMAPGALLMLR 232 (296)
T ss_pred CcCEEEEecccccccccHHHHHHHHHHhcCCCcEEEEe
Confidence 799998775 12 24678888999999998754
No 206
>COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism]
Probab=96.14 E-value=0.063 Score=47.87 Aligned_cols=97 Identities=18% Similarity=0.220 Sum_probs=66.0
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCcee-eecCCC----CcchHHHHHHHHHhhCCCCcE
Q 017793 185 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADET-AKVSTD----IEDVDTDVGKIQNAMGSGIDV 259 (366)
Q Consensus 185 ~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~d~ 259 (366)
.+|||+|.|. |-++-.++|....+++++++-+++-.++++++-.... ...+.. ..|-.+.+++ ...++|+
T Consensus 78 k~VLiiGgGd-G~tlRevlkh~~ve~i~~VEID~~Vi~~ar~~l~~~~~~~~dpRv~i~i~Dg~~~v~~----~~~~fDv 152 (282)
T COG0421 78 KRVLIIGGGD-GGTLREVLKHLPVERITMVEIDPAVIELARKYLPEPSGGADDPRVEIIIDDGVEFLRD----CEEKFDV 152 (282)
T ss_pred CeEEEECCCc-cHHHHHHHhcCCcceEEEEEcCHHHHHHHHHhccCcccccCCCceEEEeccHHHHHHh----CCCcCCE
Confidence 5999998665 6678889998888899999999999998887421110 000010 1233333333 2458999
Q ss_pred EE-EcCCC---------hHHHHHHHHhhcCCceEEEE
Q 017793 260 SF-DCVGF---------DKTMSTALNATRPGGKVCLI 286 (366)
Q Consensus 260 vl-d~~g~---------~~~~~~~~~~l~~~G~~v~~ 286 (366)
+| |+... ....+.+.++|+++|.++..
T Consensus 153 Ii~D~tdp~gp~~~Lft~eFy~~~~~~L~~~Gi~v~q 189 (282)
T COG0421 153 IIVDSTDPVGPAEALFTEEFYEGCRRALKEDGIFVAQ 189 (282)
T ss_pred EEEcCCCCCCcccccCCHHHHHHHHHhcCCCcEEEEe
Confidence 85 44433 35778899999999999887
No 207
>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated
Probab=96.14 E-value=0.12 Score=43.22 Aligned_cols=99 Identities=16% Similarity=0.296 Sum_probs=64.7
Q ss_pred HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHHHHh
Q 017793 177 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNA 252 (366)
Q Consensus 177 ~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~ 252 (366)
....+.++++||=+|+|. |..++.+++.....++++++.+++..+.+++ ++...+..... +... .
T Consensus 25 ~~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~~~~~---d~~~---~---- 93 (187)
T PRK08287 25 SKLELHRAKHLIDVGAGT-GSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNIDIIPG---EAPI---E---- 93 (187)
T ss_pred HhcCCCCCCEEEEECCcC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeEEEec---Cchh---h----
Confidence 445677889999899876 7777888876543489999999987766653 44333221111 1111 1
Q ss_pred hCCCCcEEEEcCCC---hHHHHHHHHhhcCCceEEEE
Q 017793 253 MGSGIDVSFDCVGF---DKTMSTALNATRPGGKVCLI 286 (366)
Q Consensus 253 ~~~~~d~vld~~g~---~~~~~~~~~~l~~~G~~v~~ 286 (366)
....+|+|+..... ...+..+.+.|+++|+++..
T Consensus 94 ~~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~lv~~ 130 (187)
T PRK08287 94 LPGKADAIFIGGSGGNLTAIIDWSLAHLHPGGRLVLT 130 (187)
T ss_pred cCcCCCEEEECCCccCHHHHHHHHHHhcCCCeEEEEE
Confidence 13469999864321 23567788999999998764
No 208
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.13 E-value=0.043 Score=53.38 Aligned_cols=73 Identities=26% Similarity=0.381 Sum_probs=53.0
Q ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEE
Q 017793 181 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS 260 (366)
Q Consensus 181 ~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v 260 (366)
+.++++|+|+|.|.+|++++++++..|+ .|++.+..+++.+.++++|.... .. . ..... + ..+|+|
T Consensus 9 ~~~~~~v~V~G~G~sG~aa~~~L~~~G~-~v~~~D~~~~~~~~l~~~g~~~~-~~-~---~~~~~---l-----~~~D~V 74 (488)
T PRK03369 9 LLPGAPVLVAGAGVTGRAVLAALTRFGA-RPTVCDDDPDALRPHAERGVATV-ST-S---DAVQQ---I-----ADYALV 74 (488)
T ss_pred ccCCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHhCCCEEE-cC-c---chHhH---h-----hcCCEE
Confidence 5678999999999999999999999999 68888877666666677776332 11 1 11111 1 357999
Q ss_pred EEcCCCh
Q 017793 261 FDCVGFD 267 (366)
Q Consensus 261 ld~~g~~ 267 (366)
+.+.|.+
T Consensus 75 V~SpGi~ 81 (488)
T PRK03369 75 VTSPGFR 81 (488)
T ss_pred EECCCCC
Confidence 9988875
No 209
>TIGR00138 gidB 16S rRNA methyltransferase GidB. GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA.
Probab=96.12 E-value=0.053 Score=45.15 Aligned_cols=93 Identities=19% Similarity=0.270 Sum_probs=59.4
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCceeeecCCCCcchHHHHHHHHHhhCCCCcE
Q 017793 184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR----NLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDV 259 (366)
Q Consensus 184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 259 (366)
+++||-+|||. |..++.+++.....+|++++.+++..+.++ +.+.+.+..... +..+ +. ....+|+
T Consensus 43 ~~~vLDiGcGt-G~~s~~la~~~~~~~V~~iD~s~~~~~~a~~~~~~~~~~~i~~i~~---d~~~----~~--~~~~fD~ 112 (181)
T TIGR00138 43 GKKVIDIGSGA-GFPGIPLAIARPELKLTLLESNHKKVAFLREVKAELGLNNVEIVNG---RAED----FQ--HEEQFDV 112 (181)
T ss_pred CCeEEEecCCC-CccHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHhCCCCeEEEec---chhh----cc--ccCCccE
Confidence 78899899775 677777776554447999999998665554 355443222111 2111 11 1457999
Q ss_pred EEEcCC--ChHHHHHHHHhhcCCceEEEE
Q 017793 260 SFDCVG--FDKTMSTALNATRPGGKVCLI 286 (366)
Q Consensus 260 vld~~g--~~~~~~~~~~~l~~~G~~v~~ 286 (366)
|+-..- -+..++.+.+.|+++|+++..
T Consensus 113 I~s~~~~~~~~~~~~~~~~LkpgG~lvi~ 141 (181)
T TIGR00138 113 ITSRALASLNVLLELTLNLLKVGGYFLAY 141 (181)
T ss_pred EEehhhhCHHHHHHHHHHhcCCCCEEEEE
Confidence 976531 134566778889999998865
No 210
>PRK04266 fibrillarin; Provisional
Probab=96.12 E-value=0.14 Score=44.31 Aligned_cols=104 Identities=11% Similarity=0.159 Sum_probs=63.5
Q ss_pred HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC--ceeeecCCCCcchHHHHHHHHHhhC
Q 017793 177 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA--DETAKVSTDIEDVDTDVGKIQNAMG 254 (366)
Q Consensus 177 ~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~--~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (366)
+...+++|++||=.|+|. |..+..+++..+...|++++.+++..+.+.+.-. +.+..+..+..+. .....+ .
T Consensus 66 ~~l~i~~g~~VlD~G~G~-G~~~~~la~~v~~g~V~avD~~~~ml~~l~~~a~~~~nv~~i~~D~~~~-~~~~~l----~ 139 (226)
T PRK04266 66 KNFPIKKGSKVLYLGAAS-GTTVSHVSDIVEEGVVYAVEFAPRPMRELLEVAEERKNIIPILADARKP-ERYAHV----V 139 (226)
T ss_pred hhCCCCCCCEEEEEccCC-CHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhhcCCcEEEECCCCCc-chhhhc----c
Confidence 457889999999998765 5567777877653479999999987664433211 1111111111110 000111 2
Q ss_pred CCCcEEEEcCCChH----HHHHHHHhhcCCceEEEE
Q 017793 255 SGIDVSFDCVGFDK----TMSTALNATRPGGKVCLI 286 (366)
Q Consensus 255 ~~~d~vld~~g~~~----~~~~~~~~l~~~G~~v~~ 286 (366)
..+|+++.....+. .+..+.+.|++||+++..
T Consensus 140 ~~~D~i~~d~~~p~~~~~~L~~~~r~LKpGG~lvI~ 175 (226)
T PRK04266 140 EKVDVIYQDVAQPNQAEIAIDNAEFFLKDGGYLLLA 175 (226)
T ss_pred ccCCEEEECCCChhHHHHHHHHHHHhcCCCcEEEEE
Confidence 35999996554331 356788899999999873
No 211
>PRK07326 short chain dehydrogenase; Provisional
Probab=96.10 E-value=0.15 Score=44.19 Aligned_cols=82 Identities=29% Similarity=0.321 Sum_probs=49.8
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHH-HHHHcCC-ceeeec--C-CCCcchHHHHHHHHHhhCCC
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGA-DETAKV--S-TDIEDVDTDVGKIQNAMGSG 256 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~-~~~~~~--~-~~~~~~~~~~~~~~~~~~~~ 256 (366)
.+.++||.| +|.+|...++.+...|+ .|+++++++++.. ..+++.. ..+..+ + .+..++...++++.+. .++
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~ 82 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGY-KVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAA-FGG 82 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHH-cCC
Confidence 367899998 69999998888877898 5777777776554 3344431 111111 1 2223333334433322 247
Q ss_pred CcEEEEcCCC
Q 017793 257 IDVSFDCVGF 266 (366)
Q Consensus 257 ~d~vld~~g~ 266 (366)
+|++|.+.|.
T Consensus 83 ~d~vi~~ag~ 92 (237)
T PRK07326 83 LDVLIANAGV 92 (237)
T ss_pred CCEEEECCCC
Confidence 9999998764
No 212
>TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase. MenG is a generic term for a methyltransferase that catalyzes the last step in menaquinone biosynthesis; the exact enzymatic activity differs for different MenG because the menaquinone differ in their prenoid side chains in different species. Members of this MenG protein family are 2-heptaprenyl-1,4-naphthoquinone methyltransferase, and are found together in operons with the two subunits of the heptaprenyl diphosphate synthase in Bacillus subtilis and related species.
Probab=96.10 E-value=0.095 Score=45.42 Aligned_cols=103 Identities=21% Similarity=0.262 Sum_probs=66.0
Q ss_pred HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHHHH
Q 017793 177 RRANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQN 251 (366)
Q Consensus 177 ~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~ 251 (366)
....++++++||=+|||. |..+..+++..+. ..+++++.+++..+.+++ .+.+.+.....+..++ .
T Consensus 39 ~~l~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~-------~- 109 (231)
T TIGR02752 39 KRMNVQAGTSALDVCCGT-ADWSIALAEAVGPEGHVIGLDFSENMLSVGRQKVKDAGLHNVELVHGNAMEL-------P- 109 (231)
T ss_pred HhcCCCCCCEEEEeCCCc-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEechhcC-------C-
Confidence 456778899999999876 7788888887642 379999999887766654 2332221111111111 0
Q ss_pred hhCCCCcEEEEcCC-----C-hHHHHHHHHhhcCCceEEEEcc
Q 017793 252 AMGSGIDVSFDCVG-----F-DKTMSTALNATRPGGKVCLIGL 288 (366)
Q Consensus 252 ~~~~~~d~vld~~g-----~-~~~~~~~~~~l~~~G~~v~~g~ 288 (366)
.....+|+|+-+.. . ...+..+.+.|+++|+++....
T Consensus 110 ~~~~~fD~V~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 152 (231)
T TIGR02752 110 FDDNSFDYVTIGFGLRNVPDYMQVLREMYRVVKPGGKVVCLET 152 (231)
T ss_pred CCCCCccEEEEecccccCCCHHHHHHHHHHHcCcCeEEEEEEC
Confidence 01357999975321 1 2356778899999999987643
No 213
>PLN02823 spermine synthase
Probab=96.10 E-value=0.075 Score=48.76 Aligned_cols=96 Identities=18% Similarity=0.253 Sum_probs=63.0
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC--------ceeeecCCCCcchHHHHHHHHHhhC
Q 017793 183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA--------DETAKVSTDIEDVDTDVGKIQNAMG 254 (366)
Q Consensus 183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~--------~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (366)
...+|||+|+|. |..+..+++..+..++++++.+++-.++++++-. +.+-.+. .|....++. ..
T Consensus 103 ~pk~VLiiGgG~-G~~~re~l~~~~~~~v~~VEiD~~vv~lar~~~~~~~~~~~dprv~v~~---~Da~~~L~~----~~ 174 (336)
T PLN02823 103 NPKTVFIMGGGE-GSTAREVLRHKTVEKVVMCDIDQEVVDFCRKHLTVNREAFCDKRLELII---NDARAELEK----RD 174 (336)
T ss_pred CCCEEEEECCCc-hHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhcccccccccCCceEEEE---ChhHHHHhh----CC
Confidence 457899999775 6667788887777789999999999999987532 1111111 232333322 35
Q ss_pred CCCcEEEEcCC------------ChHHHH-HHHHhhcCCceEEEE
Q 017793 255 SGIDVSFDCVG------------FDKTMS-TALNATRPGGKVCLI 286 (366)
Q Consensus 255 ~~~d~vld~~g------------~~~~~~-~~~~~l~~~G~~v~~ 286 (366)
..+|+||--.. +.+.+. .+.+.|+++|.++.-
T Consensus 175 ~~yDvIi~D~~dp~~~~~~~~Lyt~eF~~~~~~~~L~p~Gvlv~q 219 (336)
T PLN02823 175 EKFDVIIGDLADPVEGGPCYQLYTKSFYERIVKPKLNPGGIFVTQ 219 (336)
T ss_pred CCccEEEecCCCccccCcchhhccHHHHHHHHHHhcCCCcEEEEe
Confidence 67999964321 123455 678899999998764
No 214
>PRK14103 trans-aconitate 2-methyltransferase; Provisional
Probab=96.09 E-value=0.098 Score=46.17 Aligned_cols=98 Identities=23% Similarity=0.301 Sum_probs=68.5
Q ss_pred HHHhCCCCCCCEEEEECCCHHHHHHHHHHHHC-CCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhh
Q 017793 175 ACRRANVGPETNVMIMGSGPIGLVTLLAARAF-GAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM 253 (366)
Q Consensus 175 ~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~-g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (366)
.+.....+++++||=+|||. |..+..+++.. +. .|++++.+++-.+.+++.+.+... .+.. .+. .
T Consensus 21 ll~~l~~~~~~~vLDlGcG~-G~~~~~l~~~~p~~-~v~gvD~s~~~~~~a~~~~~~~~~------~d~~----~~~--~ 86 (255)
T PRK14103 21 LLARVGAERARRVVDLGCGP-GNLTRYLARRWPGA-VIEALDSSPEMVAAARERGVDART------GDVR----DWK--P 86 (255)
T ss_pred HHHhCCCCCCCEEEEEcCCC-CHHHHHHHHHCCCC-EEEEEECCHHHHHHHHhcCCcEEE------cChh----hCC--C
Confidence 34556678889999999877 77888888875 44 799999999988888776543221 1211 111 1
Q ss_pred CCCCcEEEEcCC-----C-hHHHHHHHHhhcCCceEEEE
Q 017793 254 GSGIDVSFDCVG-----F-DKTMSTALNATRPGGKVCLI 286 (366)
Q Consensus 254 ~~~~d~vld~~g-----~-~~~~~~~~~~l~~~G~~v~~ 286 (366)
...||+|+.... . ...+..+.+.|+|||+++..
T Consensus 87 ~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~ 125 (255)
T PRK14103 87 KPDTDVVVSNAALQWVPEHADLLVRWVDELAPGSWIAVQ 125 (255)
T ss_pred CCCceEEEEehhhhhCCCHHHHHHHHHHhCCCCcEEEEE
Confidence 357999987442 2 34567788899999998865
No 215
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=96.06 E-value=0.065 Score=43.17 Aligned_cols=103 Identities=18% Similarity=0.301 Sum_probs=61.9
Q ss_pred HHHhCCC-CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHH-HHHHcCCce-eeecCCCCcchHHHHHHHHH
Q 017793 175 ACRRANV-GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADE-TAKVSTDIEDVDTDVGKIQN 251 (366)
Q Consensus 175 ~l~~~~~-~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~-~~~~~~~~~~~~~~~~~~~~ 251 (366)
+++...+ ..+.+++|.|+|.+|...++.+...|...+.+++++.++.+ ++++++... .... .+.. +.
T Consensus 9 a~~~~~~~~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~----~~~~----~~-- 78 (155)
T cd01065 9 ALEEAGIELKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAY----LDLE----EL-- 78 (155)
T ss_pred HHHhhCCCCCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceee----cchh----hc--
Confidence 4444443 45688999999999999888888776547888888877655 455555421 0011 1111 11
Q ss_pred hhCCCCcEEEEcCCChHH----HHHHHHhhcCCceEEEEccc
Q 017793 252 AMGSGIDVSFDCVGFDKT----MSTALNATRPGGKVCLIGLA 289 (366)
Q Consensus 252 ~~~~~~d~vld~~g~~~~----~~~~~~~l~~~G~~v~~g~~ 289 (366)
-.++|+|+.|++.... .......++++..++.++..
T Consensus 79 --~~~~Dvvi~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~~ 118 (155)
T cd01065 79 --LAEADLIINTTPVGMKPGDELPLPPSLLKPGGVVYDVVYN 118 (155)
T ss_pred --cccCCEEEeCcCCCCCCCCCCCCCHHHcCCCCEEEEcCcC
Confidence 2579999999986532 11112345566666655433
No 216
>PLN02366 spermidine synthase
Probab=96.04 E-value=0.076 Score=48.13 Aligned_cols=100 Identities=20% Similarity=0.215 Sum_probs=65.6
Q ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC-------c-eeeecCCCCcchHHHHHHHHHh
Q 017793 181 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA-------D-ETAKVSTDIEDVDTDVGKIQNA 252 (366)
Q Consensus 181 ~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~-------~-~~~~~~~~~~~~~~~~~~~~~~ 252 (366)
....++|||+|+|. |..+..+++.-+..+|.+++.+++-.+.++++-. + .+-.+. .|....+++.
T Consensus 89 ~~~pkrVLiIGgG~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~---~Da~~~l~~~--- 161 (308)
T PLN02366 89 IPNPKKVLVVGGGD-GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHI---GDGVEFLKNA--- 161 (308)
T ss_pred CCCCCeEEEEcCCc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEE---ChHHHHHhhc---
Confidence 35678999999876 6677888887677789999999988888777421 1 111111 2322233221
Q ss_pred hCCCCcEEEEcCCC----------hHHHHHHHHhhcCCceEEEEc
Q 017793 253 MGSGIDVSFDCVGF----------DKTMSTALNATRPGGKVCLIG 287 (366)
Q Consensus 253 ~~~~~d~vld~~g~----------~~~~~~~~~~l~~~G~~v~~g 287 (366)
.++.+|+||--... .+.+..+.+.|+++|.++...
T Consensus 162 ~~~~yDvIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pgGvlv~q~ 206 (308)
T PLN02366 162 PEGTYDAIIVDSSDPVGPAQELFEKPFFESVARALRPGGVVCTQA 206 (308)
T ss_pred cCCCCCEEEEcCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEECc
Confidence 14579999764322 235778889999999987654
No 217
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=96.03 E-value=0.16 Score=43.88 Aligned_cols=91 Identities=19% Similarity=0.244 Sum_probs=59.4
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCC--eEEEEcCC----hhH--------HHHHHHcCCceeeecCCCCcchHHHHH
Q 017793 182 GPETNVMIMGSGPIGLVTLLAARAFGAP--RIIITDVD----VQR--------LSIARNLGADETAKVSTDIEDVDTDVG 247 (366)
Q Consensus 182 ~~~~~vlI~G~g~vG~~ai~la~~~g~~--~vv~v~~~----~~~--------~~~~~~lg~~~~~~~~~~~~~~~~~~~ 247 (366)
-.+.+++|+|+|+.|..++..+...|++ +++.++++ +++ .++++.++... . ..++.+.
T Consensus 23 l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~-----~~~l~~~-- 94 (226)
T cd05311 23 IEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-T-----GGTLKEA-- 94 (226)
T ss_pred ccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-c-----cCCHHHH--
Confidence 3568999999999999988888888998 89999887 443 33444443211 0 0122222
Q ss_pred HHHHhhCCCCcEEEEcCCChHHH-HHHHHhhcCCceEEEEc
Q 017793 248 KIQNAMGSGIDVSFDCVGFDKTM-STALNATRPGGKVCLIG 287 (366)
Q Consensus 248 ~~~~~~~~~~d~vld~~g~~~~~-~~~~~~l~~~G~~v~~g 287 (366)
+ .++|++|.+++.. .+ ...++.+.++..++.+.
T Consensus 95 -l-----~~~dvlIgaT~~G-~~~~~~l~~m~~~~ivf~ls 128 (226)
T cd05311 95 -L-----KGADVFIGVSRPG-VVKKEMIKKMAKDPIVFALA 128 (226)
T ss_pred -H-----hcCCEEEeCCCCC-CCCHHHHHhhCCCCEEEEeC
Confidence 2 2489999999733 33 35667777776665544
No 218
>TIGR00417 speE spermidine synthase. the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM.
Probab=96.03 E-value=0.065 Score=47.79 Aligned_cols=99 Identities=13% Similarity=0.142 Sum_probs=62.0
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCc-------eeeecCCCCcchHHHHHHHHHhhC
Q 017793 182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD-------ETAKVSTDIEDVDTDVGKIQNAMG 254 (366)
Q Consensus 182 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~-------~~~~~~~~~~~~~~~~~~~~~~~~ 254 (366)
+.+.+||++|+|. |..+..+++......+.+++.+++-.+.++++-.. .-+.+. ..+..+.+++ ..
T Consensus 71 ~~p~~VL~iG~G~-G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i~--~~D~~~~l~~----~~ 143 (270)
T TIGR00417 71 PNPKHVLVIGGGD-GGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRVDLQ--IDDGFKFLAD----TE 143 (270)
T ss_pred CCCCEEEEEcCCc-hHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCceEEE--ECchHHHHHh----CC
Confidence 3456999999766 55666777766566899999998877777663110 001110 1232233322 24
Q ss_pred CCCcEEEEcCC----------ChHHHHHHHHhhcCCceEEEEc
Q 017793 255 SGIDVSFDCVG----------FDKTMSTALNATRPGGKVCLIG 287 (366)
Q Consensus 255 ~~~d~vld~~g----------~~~~~~~~~~~l~~~G~~v~~g 287 (366)
..+|+|+-... ..+.++.+.+.|+++|.++...
T Consensus 144 ~~yDvIi~D~~~~~~~~~~l~~~ef~~~~~~~L~pgG~lv~~~ 186 (270)
T TIGR00417 144 NTFDVIIVDSTDPVGPAETLFTKEFYELLKKALNEDGIFVAQS 186 (270)
T ss_pred CCccEEEEeCCCCCCcccchhHHHHHHHHHHHhCCCcEEEEcC
Confidence 68999975332 2245667889999999998763
No 219
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=96.03 E-value=0.051 Score=51.17 Aligned_cols=95 Identities=18% Similarity=0.301 Sum_probs=56.6
Q ss_pred EEEECCCHHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHHH-cCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcC
Q 017793 187 VMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARN-LGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCV 264 (366)
Q Consensus 187 vlI~G~g~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~ 264 (366)
|+|+|+|.+|..+++.+...+- ..|++.+++.++.+.+.+ +....+-...-+..+..+ +.++. .+.|+|++|+
T Consensus 1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-l~~~~----~~~dvVin~~ 75 (386)
T PF03435_consen 1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPES-LAELL----RGCDVVINCA 75 (386)
T ss_dssp EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHH-HHHHH----TTSSEEEE-S
T ss_pred CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHH-HHHHH----hcCCEEEECC
Confidence 6899999999999999887763 378889999998765543 221111111111123222 55553 4569999999
Q ss_pred CChHHHHHHHHhhcCCceEEEE
Q 017793 265 GFDKTMSTALNATRPGGKVCLI 286 (366)
Q Consensus 265 g~~~~~~~~~~~l~~~G~~v~~ 286 (366)
|.......+-.++..+-.++..
T Consensus 76 gp~~~~~v~~~~i~~g~~yvD~ 97 (386)
T PF03435_consen 76 GPFFGEPVARACIEAGVHYVDT 97 (386)
T ss_dssp SGGGHHHHHHHHHHHT-EEEES
T ss_pred ccchhHHHHHHHHHhCCCeecc
Confidence 9654445555566777777774
No 220
>PLN02233 ubiquinone biosynthesis methyltransferase
Probab=96.01 E-value=0.09 Score=46.59 Aligned_cols=105 Identities=17% Similarity=0.234 Sum_probs=67.4
Q ss_pred HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHHHcC-------CceeeecCCCCcchHHHHHH
Q 017793 177 RRANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARNLG-------ADETAKVSTDIEDVDTDVGK 248 (366)
Q Consensus 177 ~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~lg-------~~~~~~~~~~~~~~~~~~~~ 248 (366)
+...++++++||-+|+|. |..+..+++..+. ..|+++|.+++-.+.+++.. .+.+.....+..++.
T Consensus 67 ~~~~~~~~~~VLDlGcGt-G~~~~~la~~~~~~~~V~gvD~S~~ml~~A~~r~~~~~~~~~~~i~~~~~d~~~lp----- 140 (261)
T PLN02233 67 SWSGAKMGDRVLDLCCGS-GDLAFLLSEKVGSDGKVMGLDFSSEQLAVAASRQELKAKSCYKNIEWIEGDATDLP----- 140 (261)
T ss_pred HHhCCCCCCEEEEECCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHhhhhhhccCCCeEEEEcccccCC-----
Confidence 345678899999999876 6677888887653 37999999999887775421 111111111111110
Q ss_pred HHHhhCCCCcEEEEcCC-----C-hHHHHHHHHhhcCCceEEEEcccC
Q 017793 249 IQNAMGSGIDVSFDCVG-----F-DKTMSTALNATRPGGKVCLIGLAK 290 (366)
Q Consensus 249 ~~~~~~~~~d~vld~~g-----~-~~~~~~~~~~l~~~G~~v~~g~~~ 290 (366)
.....||.|+-+.+ . ...+..+.+.|+|||+++.+....
T Consensus 141 ---~~~~sfD~V~~~~~l~~~~d~~~~l~ei~rvLkpGG~l~i~d~~~ 185 (261)
T PLN02233 141 ---FDDCYFDAITMGYGLRNVVDRLKAMQEMYRVLKPGSRVSILDFNK 185 (261)
T ss_pred ---CCCCCEeEEEEecccccCCCHHHHHHHHHHHcCcCcEEEEEECCC
Confidence 01346899875432 1 246788999999999998875443
No 221
>PRK06057 short chain dehydrogenase; Provisional
Probab=95.98 E-value=0.078 Score=46.61 Aligned_cols=81 Identities=25% Similarity=0.342 Sum_probs=51.0
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHH-HHHcCCcee-eecCCCCcchHHHHHHHHHhhCCCCcE
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARNLGADET-AKVSTDIEDVDTDVGKIQNAMGSGIDV 259 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~ 259 (366)
++.++||.| +|.+|...++.+...|+ .|+.+++++.+.+. .++++.... .|. .+.......+.++.. ..+++|+
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~-~~~~id~ 82 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGA-TVVVGDIDPEAGKAAADEVGGLFVPTDV-TDEDAVNALFDTAAE-TYGSVDI 82 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCcEEEeeC-CCHHHHHHHHHHHHH-HcCCCCE
Confidence 478999998 59999999998888898 67777777766543 344543221 222 222233333333322 1346999
Q ss_pred EEEcCCC
Q 017793 260 SFDCVGF 266 (366)
Q Consensus 260 vld~~g~ 266 (366)
++.+.|.
T Consensus 83 vi~~ag~ 89 (255)
T PRK06057 83 AFNNAGI 89 (255)
T ss_pred EEECCCc
Confidence 9998874
No 222
>PRK06139 short chain dehydrogenase; Provisional
Probab=95.96 E-value=0.079 Score=48.74 Aligned_cols=81 Identities=33% Similarity=0.426 Sum_probs=52.3
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCcee---eecCCCCcchHHHHHHHHHhhC
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADET---AKVSTDIEDVDTDVGKIQNAMG 254 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~~---~~~~~~~~~~~~~~~~~~~~~~ 254 (366)
.+.++||.| +|++|.+.++.+...|+ .|+.+++++++.+.+ ++.|.+.. .|. ++.++..+.+.++.+ ..
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~-~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv-~d~~~v~~~~~~~~~-~~ 82 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGA-RLVLAARDEEALQAVAEECRALGAEVLVVPTDV-TDADQVKALATQAAS-FG 82 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeC-CCHHHHHHHHHHHHH-hc
Confidence 467899998 58999999998888999 677777887765432 33454421 222 222333333333332 23
Q ss_pred CCCcEEEEcCCC
Q 017793 255 SGIDVSFDCVGF 266 (366)
Q Consensus 255 ~~~d~vld~~g~ 266 (366)
+++|+++++.|.
T Consensus 83 g~iD~lVnnAG~ 94 (330)
T PRK06139 83 GRIDVWVNNVGV 94 (330)
T ss_pred CCCCEEEECCCc
Confidence 579999999874
No 223
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=95.95 E-value=0.063 Score=50.79 Aligned_cols=75 Identities=15% Similarity=0.299 Sum_probs=53.0
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHH-HHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEE
Q 017793 182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS 260 (366)
Q Consensus 182 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v 260 (366)
-.+.++||+|+|.+|.+++..+...|+..+.++.++.++.+ ++.+++....+.+ +.+.+. -..+|+|
T Consensus 179 l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~--------~~l~~~----l~~aDiV 246 (414)
T PRK13940 179 ISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYL--------SELPQL----IKKADII 246 (414)
T ss_pred ccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecH--------HHHHHH----hccCCEE
Confidence 35789999999999999999999899878888888877755 4455652122221 122222 2469999
Q ss_pred EEcCCChH
Q 017793 261 FDCVGFDK 268 (366)
Q Consensus 261 ld~~g~~~ 268 (366)
|.|++.+.
T Consensus 247 I~aT~a~~ 254 (414)
T PRK13940 247 IAAVNVLE 254 (414)
T ss_pred EECcCCCC
Confidence 99999863
No 224
>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional
Probab=95.95 E-value=0.05 Score=48.07 Aligned_cols=95 Identities=19% Similarity=0.329 Sum_probs=62.2
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc----CCc-eeeecCCCCcchHHHHHHHHHhhCCC
Q 017793 182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GAD-ETAKVSTDIEDVDTDVGKIQNAMGSG 256 (366)
Q Consensus 182 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (366)
.++.+||-+|||. |..+..+++. |. .|++++.+++..+.+++. |.. .+..... +.. ++.......
T Consensus 43 ~~~~~vLDiGcG~-G~~a~~la~~-g~-~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~~---d~~----~l~~~~~~~ 112 (255)
T PRK11036 43 PRPLRVLDAGGGE-GQTAIKLAEL-GH-QVILCDLSAEMIQRAKQAAEAKGVSDNMQFIHC---AAQ----DIAQHLETP 112 (255)
T ss_pred CCCCEEEEeCCCc-hHHHHHHHHc-CC-EEEEEECCHHHHHHHHHHHHhcCCccceEEEEc---CHH----HHhhhcCCC
Confidence 4567899899877 7888888885 66 799999999988777653 321 1111111 111 111112467
Q ss_pred CcEEEEcCC-----C-hHHHHHHHHhhcCCceEEEE
Q 017793 257 IDVSFDCVG-----F-DKTMSTALNATRPGGKVCLI 286 (366)
Q Consensus 257 ~d~vld~~g-----~-~~~~~~~~~~l~~~G~~v~~ 286 (366)
+|+|+.... . ...+..+.+.|+|+|.++.+
T Consensus 113 fD~V~~~~vl~~~~~~~~~l~~~~~~LkpgG~l~i~ 148 (255)
T PRK11036 113 VDLILFHAVLEWVADPKSVLQTLWSVLRPGGALSLM 148 (255)
T ss_pred CCEEEehhHHHhhCCHHHHHHHHHHHcCCCeEEEEE
Confidence 999985421 1 24577888999999998765
No 225
>PRK08267 short chain dehydrogenase; Provisional
Probab=95.91 E-value=0.16 Score=44.71 Aligned_cols=80 Identities=30% Similarity=0.405 Sum_probs=49.9
Q ss_pred CEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcCCcee----eecCCCCcchHHHHHHHHHhhCCCCc
Q 017793 185 TNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-NLGADET----AKVSTDIEDVDTDVGKIQNAMGSGID 258 (366)
Q Consensus 185 ~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~lg~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~d 258 (366)
.++||.| +|.+|...++.+...|+ .|+.++++.++.+.+. .++...+ .|. .+..++.+.+.+......+++|
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~v~~~~~~~~~~~~~~id 79 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGW-RVGAYDINEAGLAALAAELGAGNAWTGALDV-TDRAAWDAALADFAAATGGRLD 79 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcCCceEEEEecC-CCHHHHHHHHHHHHHHcCCCCC
Confidence 4689998 69999998888888898 6777777777655443 3331111 222 2223333334333322145799
Q ss_pred EEEEcCCC
Q 017793 259 VSFDCVGF 266 (366)
Q Consensus 259 ~vld~~g~ 266 (366)
+++.+.|.
T Consensus 80 ~vi~~ag~ 87 (260)
T PRK08267 80 VLFNNAGI 87 (260)
T ss_pred EEEECCCC
Confidence 99999875
No 226
>PLN02244 tocopherol O-methyltransferase
Probab=95.88 E-value=0.12 Score=47.76 Aligned_cols=96 Identities=17% Similarity=0.238 Sum_probs=63.2
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc----CCc-eeeecCCCCcchHHHHHHHHHhhCCC
Q 017793 182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GAD-ETAKVSTDIEDVDTDVGKIQNAMGSG 256 (366)
Q Consensus 182 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (366)
+++++||=+|||. |..+..+++..|+ .|++++.+++..+.+++. +.. .+.....+..+.. + ..+.
T Consensus 117 ~~~~~VLDiGCG~-G~~~~~La~~~g~-~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~D~~~~~-----~---~~~~ 186 (340)
T PLN02244 117 KRPKRIVDVGCGI-GGSSRYLARKYGA-NVKGITLSPVQAARANALAAAQGLSDKVSFQVADALNQP-----F---EDGQ 186 (340)
T ss_pred CCCCeEEEecCCC-CHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcCcccCC-----C---CCCC
Confidence 7889999999876 7788888888787 799999999876665542 332 1111111111110 0 1357
Q ss_pred CcEEEEcCCC------hHHHHHHHHhhcCCceEEEEc
Q 017793 257 IDVSFDCVGF------DKTMSTALNATRPGGKVCLIG 287 (366)
Q Consensus 257 ~d~vld~~g~------~~~~~~~~~~l~~~G~~v~~g 287 (366)
||+|+..... ...+..+.+.|++||+++...
T Consensus 187 FD~V~s~~~~~h~~d~~~~l~e~~rvLkpGG~lvi~~ 223 (340)
T PLN02244 187 FDLVWSMESGEHMPDKRKFVQELARVAAPGGRIIIVT 223 (340)
T ss_pred ccEEEECCchhccCCHHHHHHHHHHHcCCCcEEEEEE
Confidence 9999864321 246678889999999998764
No 227
>PRK01683 trans-aconitate 2-methyltransferase; Provisional
Probab=95.87 E-value=0.13 Score=45.42 Aligned_cols=99 Identities=23% Similarity=0.294 Sum_probs=67.4
Q ss_pred HHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCc-eeeecCCCCcchHHHHHHHHHhhC
Q 017793 176 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD-ETAKVSTDIEDVDTDVGKIQNAMG 254 (366)
Q Consensus 176 l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~-~~~~~~~~~~~~~~~~~~~~~~~~ 254 (366)
+....++++++||=+|||. |..+..+++..+...|++++.+++..+.+++.-.. ..+. . +... +. ..
T Consensus 24 l~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~--~---d~~~----~~--~~ 91 (258)
T PRK01683 24 LARVPLENPRYVVDLGCGP-GNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVE--A---DIAS----WQ--PP 91 (258)
T ss_pred HhhCCCcCCCEEEEEcccC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEE--C---chhc----cC--CC
Confidence 3445678889999999876 77888888877545899999999988877764321 1111 1 1111 11 13
Q ss_pred CCCcEEEEcCCC------hHHHHHHHHhhcCCceEEEE
Q 017793 255 SGIDVSFDCVGF------DKTMSTALNATRPGGKVCLI 286 (366)
Q Consensus 255 ~~~d~vld~~g~------~~~~~~~~~~l~~~G~~v~~ 286 (366)
..+|+|+....- ...+..+.+.|++||.++..
T Consensus 92 ~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~~~~~ 129 (258)
T PRK01683 92 QALDLIFANASLQWLPDHLELFPRLVSLLAPGGVLAVQ 129 (258)
T ss_pred CCccEEEEccChhhCCCHHHHHHHHHHhcCCCcEEEEE
Confidence 479999765431 24677888999999998875
No 228
>PRK07060 short chain dehydrogenase; Provisional
Probab=95.86 E-value=0.084 Score=45.96 Aligned_cols=78 Identities=21% Similarity=0.344 Sum_probs=50.3
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEE
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS 260 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v 260 (366)
++.+++|.| +|.+|...++.+...|. .|+.++++.++.+.+ ++++... +..+- .+. ..+.+.... .+++|++
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~-~~~D~--~~~-~~v~~~~~~-~~~~d~v 81 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGA-RVVAAARNAAALDRLAGETGCEP-LRLDV--GDD-AAIRAALAA-AGAFDGL 81 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeE-EEecC--CCH-HHHHHHHHH-hCCCCEE
Confidence 467899998 58999999999998998 677787877666544 3344432 22111 121 123333221 3579999
Q ss_pred EEcCCC
Q 017793 261 FDCVGF 266 (366)
Q Consensus 261 ld~~g~ 266 (366)
|++.|.
T Consensus 82 i~~ag~ 87 (245)
T PRK07060 82 VNCAGI 87 (245)
T ss_pred EECCCC
Confidence 999874
No 229
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=95.85 E-value=0.04 Score=49.42 Aligned_cols=76 Identities=14% Similarity=0.135 Sum_probs=50.5
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCCce-eeecCCCCcchHHHHHHHHHhhCCCCcEE
Q 017793 183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGADE-TAKVSTDIEDVDTDVGKIQNAMGSGIDVS 260 (366)
Q Consensus 183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~v 260 (366)
.+.++||+|+|+.|.+++.-+...|+..+.++.++.+|.+.+ +.++... +..+. .. ..+... -..+|+|
T Consensus 124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~----~~-~~~~~~----~~~~DiV 194 (282)
T TIGR01809 124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLE----GD-SGGLAI----EKAAEVL 194 (282)
T ss_pred CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceecc----ch-hhhhhc----ccCCCEE
Confidence 578899999999999999988899998888888888776644 4443211 11110 00 111111 2469999
Q ss_pred EEcCCCh
Q 017793 261 FDCVGFD 267 (366)
Q Consensus 261 ld~~g~~ 267 (366)
++|++..
T Consensus 195 InaTp~g 201 (282)
T TIGR01809 195 VSTVPAD 201 (282)
T ss_pred EECCCCC
Confidence 9998754
No 230
>PRK03612 spermidine synthase; Provisional
Probab=95.80 E-value=0.062 Score=52.60 Aligned_cols=98 Identities=16% Similarity=0.184 Sum_probs=64.6
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcC-C----------ceeeecCCCCcchHHHHHHHH
Q 017793 182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLG-A----------DETAKVSTDIEDVDTDVGKIQ 250 (366)
Q Consensus 182 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg-~----------~~~~~~~~~~~~~~~~~~~~~ 250 (366)
+++++||++|+|. |..+..+++.-+.+++.+++.+++-.+.+++.. . +.+..+. .|..+.+++
T Consensus 296 ~~~~rVL~IG~G~-G~~~~~ll~~~~v~~v~~VEid~~vi~~ar~~~~l~~~~~~~~~dprv~vi~---~Da~~~l~~-- 369 (521)
T PRK03612 296 ARPRRVLVLGGGD-GLALREVLKYPDVEQVTLVDLDPAMTELARTSPALRALNGGALDDPRVTVVN---DDAFNWLRK-- 369 (521)
T ss_pred CCCCeEEEEcCCc-cHHHHHHHhCCCcCeEEEEECCHHHHHHHHhCCcchhhhccccCCCceEEEE---ChHHHHHHh--
Confidence 5678999999774 677777887645468999999999999888721 1 1111111 233232322
Q ss_pred HhhCCCCcEEEEcCCCh-----------HHHHHHHHhhcCCceEEEEc
Q 017793 251 NAMGSGIDVSFDCVGFD-----------KTMSTALNATRPGGKVCLIG 287 (366)
Q Consensus 251 ~~~~~~~d~vld~~g~~-----------~~~~~~~~~l~~~G~~v~~g 287 (366)
..+.+|+|+-....+ +.++.+.+.|+++|.++...
T Consensus 370 --~~~~fDvIi~D~~~~~~~~~~~L~t~ef~~~~~~~L~pgG~lv~~~ 415 (521)
T PRK03612 370 --LAEKFDVIIVDLPDPSNPALGKLYSVEFYRLLKRRLAPDGLLVVQS 415 (521)
T ss_pred --CCCCCCEEEEeCCCCCCcchhccchHHHHHHHHHhcCCCeEEEEec
Confidence 246899997644321 24667889999999988754
No 231
>PRK12939 short chain dehydrogenase; Provisional
Probab=95.80 E-value=0.24 Score=43.18 Aligned_cols=82 Identities=16% Similarity=0.153 Sum_probs=49.1
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HH---cCCce-eeecC-CCCcchHHHHHHHHHhhCC
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RN---LGADE-TAKVS-TDIEDVDTDVGKIQNAMGS 255 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~---lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~ 255 (366)
++.++||.| +|.+|...+..+...|. +++.+++++++.+.+ ++ .+... .+..+ .+..+..+.+.+.... -+
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~ 83 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGA-TVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAA-LG 83 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-cC
Confidence 467899998 69999998888888898 677777776654432 22 23221 11111 1222222333333221 25
Q ss_pred CCcEEEEcCCC
Q 017793 256 GIDVSFDCVGF 266 (366)
Q Consensus 256 ~~d~vld~~g~ 266 (366)
++|++|.+.|.
T Consensus 84 ~id~vi~~ag~ 94 (250)
T PRK12939 84 GLDGLVNNAGI 94 (250)
T ss_pred CCCEEEECCCC
Confidence 79999999885
No 232
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=95.79 E-value=0.1 Score=38.97 Aligned_cols=90 Identities=14% Similarity=0.246 Sum_probs=57.9
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793 183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD 262 (366)
Q Consensus 183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld 262 (366)
.+.+|||.|+|.+|..-++.+...|+ .+.++.... +..+ +.-... . ..+.+. -.++++|+.
T Consensus 6 ~~~~vlVvGgG~va~~k~~~Ll~~gA-~v~vis~~~---~~~~--~~i~~~---~--~~~~~~--------l~~~~lV~~ 66 (103)
T PF13241_consen 6 KGKRVLVVGGGPVAARKARLLLEAGA-KVTVISPEI---EFSE--GLIQLI---R--REFEED--------LDGADLVFA 66 (103)
T ss_dssp TT-EEEEEEESHHHHHHHHHHCCCTB-EEEEEESSE---HHHH--TSCEEE---E--SS-GGG--------CTTESEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCch---hhhh--hHHHHH---h--hhHHHH--------HhhheEEEe
Confidence 47899999999999999999999998 677776654 2222 211111 1 122211 357999999
Q ss_pred cCCChHHHHHHHHhhcCCceEEEEcccCC
Q 017793 263 CVGFDKTMSTALNATRPGGKVCLIGLAKT 291 (366)
Q Consensus 263 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 291 (366)
+.+.+..-.......+..|.++-+...+.
T Consensus 67 at~d~~~n~~i~~~a~~~~i~vn~~D~p~ 95 (103)
T PF13241_consen 67 ATDDPELNEAIYADARARGILVNVVDDPE 95 (103)
T ss_dssp -SS-HHHHHHHHHHHHHTTSEEEETT-CC
T ss_pred cCCCHHHHHHHHHHHhhCCEEEEECCCcC
Confidence 99987666666666777888887765443
No 233
>PRK06949 short chain dehydrogenase; Provisional
Probab=95.78 E-value=0.11 Score=45.56 Aligned_cols=82 Identities=20% Similarity=0.348 Sum_probs=51.7
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-c---CCc-eeeecC-CCCcchHHHHHHHHHhhCC
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-L---GAD-ETAKVS-TDIEDVDTDVGKIQNAMGS 255 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-l---g~~-~~~~~~-~~~~~~~~~~~~~~~~~~~ 255 (366)
.+.++||.| +|.+|...+..+...|+ .|+.+.+++++.+.+.+ + +.. ..+..+ ++..++.+.+.++.. ..+
T Consensus 8 ~~k~ilItGasg~IG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~ 85 (258)
T PRK06949 8 EGKVALVTGASSGLGARFAQVLAQAGA-KVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAET-EAG 85 (258)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH-hcC
Confidence 478999998 69999999988888899 68888788776543322 1 211 122111 222334443433332 235
Q ss_pred CCcEEEEcCCC
Q 017793 256 GIDVSFDCVGF 266 (366)
Q Consensus 256 ~~d~vld~~g~ 266 (366)
.+|++|.+.|.
T Consensus 86 ~~d~li~~ag~ 96 (258)
T PRK06949 86 TIDILVNNSGV 96 (258)
T ss_pred CCCEEEECCCC
Confidence 79999999884
No 234
>PRK08265 short chain dehydrogenase; Provisional
Probab=95.78 E-value=0.29 Score=43.24 Aligned_cols=81 Identities=22% Similarity=0.304 Sum_probs=51.5
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHH-HHHHcCCce-e--eecCCCCcchHHHHHHHHHhhCCCC
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADE-T--AKVSTDIEDVDTDVGKIQNAMGSGI 257 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (366)
.+.++||.| +|.+|...++.+...|+ .|+.++++.++.+ ..++++... . .|. .+..++.+.+.++.+. -+.+
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl-~~~~~~~~~~~~~~~~-~g~i 81 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGA-RVAIVDIDADNGAAVAASLGERARFIATDI-TDDAAIERAVATVVAR-FGRV 81 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeeEEEEecC-CCHHHHHHHHHHHHHH-hCCC
Confidence 367899998 69999998888888899 6787778776544 444454321 1 222 2223344444444332 2469
Q ss_pred cEEEEcCCC
Q 017793 258 DVSFDCVGF 266 (366)
Q Consensus 258 d~vld~~g~ 266 (366)
|+++.+.|.
T Consensus 82 d~lv~~ag~ 90 (261)
T PRK08265 82 DILVNLACT 90 (261)
T ss_pred CEEEECCCC
Confidence 999998874
No 235
>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional
Probab=95.78 E-value=0.12 Score=45.93 Aligned_cols=106 Identities=15% Similarity=0.227 Sum_probs=68.2
Q ss_pred HHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCc-eeeecCCCCcchHHHHHHHHHh
Q 017793 174 HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD-ETAKVSTDIEDVDTDVGKIQNA 252 (366)
Q Consensus 174 ~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~-~~~~~~~~~~~~~~~~~~~~~~ 252 (366)
..+...+++++.+||=+|+|. |..+..+++..++ .|++++.+++-.+.+++.... ..+.+.. .++.. . ..
T Consensus 43 ~~l~~l~l~~~~~VLDiGcG~-G~~a~~la~~~~~-~v~giD~s~~~~~~a~~~~~~~~~i~~~~--~D~~~----~-~~ 113 (263)
T PTZ00098 43 KILSDIELNENSKVLDIGSGL-GGGCKYINEKYGA-HVHGVDICEKMVNIAKLRNSDKNKIEFEA--NDILK----K-DF 113 (263)
T ss_pred HHHHhCCCCCCCEEEEEcCCC-ChhhHHHHhhcCC-EEEEEECCHHHHHHHHHHcCcCCceEEEE--CCccc----C-CC
Confidence 345667889999999999875 6667777777777 799999999888777764221 1111101 11110 0 00
Q ss_pred hCCCCcEEEEc--C---C---ChHHHHHHHHhhcCCceEEEEcc
Q 017793 253 MGSGIDVSFDC--V---G---FDKTMSTALNATRPGGKVCLIGL 288 (366)
Q Consensus 253 ~~~~~d~vld~--~---g---~~~~~~~~~~~l~~~G~~v~~g~ 288 (366)
....||+|+.. . + -...+..+.+.|+|+|+++....
T Consensus 114 ~~~~FD~V~s~~~l~h~~~~d~~~~l~~i~r~LkPGG~lvi~d~ 157 (263)
T PTZ00098 114 PENTFDMIYSRDAILHLSYADKKKLFEKCYKWLKPNGILLITDY 157 (263)
T ss_pred CCCCeEEEEEhhhHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 13569999862 1 1 12356778899999999987654
No 236
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=95.78 E-value=0.27 Score=44.23 Aligned_cols=56 Identities=25% Similarity=0.309 Sum_probs=46.4
Q ss_pred HhCCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcC---ChhHHHHHHHcCCceee
Q 017793 177 RRANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDV---DVQRLSIARNLGADETA 233 (366)
Q Consensus 177 ~~~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~---~~~~~~~~~~lg~~~~~ 233 (366)
+.+.++||.++||=. +|..|.....++...|. +++.+-. +.||...+++||+..+.
T Consensus 96 ~~G~i~pg~stliEpTSGNtGigLA~~~a~~Gy-k~i~tmP~~ms~Ek~~~l~a~Gaeii~ 155 (362)
T KOG1252|consen 96 KKGLITPGKSTLIEPTSGNTGIGLAYMAALRGY-KCIITMPEKMSKEKRILLRALGAEIIL 155 (362)
T ss_pred HcCCccCCceEEEecCCCchHHHHHHHHHHcCc-eEEEEechhhhHHHHHHHHHcCCEEEe
Confidence 458899999999998 79999999999999999 5555533 45788899999997654
No 237
>PF01209 Ubie_methyltran: ubiE/COQ5 methyltransferase family; InterPro: IPR004033 A number of methyltransferases have been shown to share regions of similarities []. Apart from the ubiquinone/menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the ubiE gene of Escherichia coli), the ubiquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the COQ5 gene of Saccharomyces cerevisiae) and the menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the MENH gene of Bacillus subtilis), this family also includes methyltransferases involved in biotin and sterol biosynthesis and in phosphatidylethanolamine methylation.; GO: 0008168 methyltransferase activity; PDB: 1VL5_C.
Probab=95.78 E-value=0.031 Score=48.56 Aligned_cols=107 Identities=22% Similarity=0.389 Sum_probs=63.6
Q ss_pred HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHHHH
Q 017793 177 RRANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQN 251 (366)
Q Consensus 177 ~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~ 251 (366)
+....++|++||=.|||. |..+..+++..+. ..|+++|.+++-++.+++ .+...+.-...+.+++. +
T Consensus 41 ~~~~~~~g~~vLDv~~Gt-G~~~~~l~~~~~~~~~v~~vD~s~~ML~~a~~k~~~~~~~~i~~v~~da~~lp-----~-- 112 (233)
T PF01209_consen 41 KLLGLRPGDRVLDVACGT-GDVTRELARRVGPNGKVVGVDISPGMLEVARKKLKREGLQNIEFVQGDAEDLP-----F-- 112 (233)
T ss_dssp HHHT--S--EEEEET-TT-SHHHHHHGGGSS---EEEEEES-HHHHHHHHHHHHHTT--SEEEEE-BTTB-------S--
T ss_pred hccCCCCCCEEEEeCCCh-HHHHHHHHHHCCCccEEEEecCCHHHHHHHHHHHHhhCCCCeeEEEcCHHHhc-----C--
Confidence 445678899999998766 7788889988763 389999999987777654 33322211112222221 1
Q ss_pred hhCCCCcEEEEcCCCh------HHHHHHHHhhcCCceEEEEcccCCC
Q 017793 252 AMGSGIDVSFDCVGFD------KTMSTALNATRPGGKVCLIGLAKTE 292 (366)
Q Consensus 252 ~~~~~~d~vld~~g~~------~~~~~~~~~l~~~G~~v~~g~~~~~ 292 (366)
....||.|..+.|-. ..+.+..+.|+|||+++.+....+.
T Consensus 113 -~d~sfD~v~~~fglrn~~d~~~~l~E~~RVLkPGG~l~ile~~~p~ 158 (233)
T PF01209_consen 113 -PDNSFDAVTCSFGLRNFPDRERALREMYRVLKPGGRLVILEFSKPR 158 (233)
T ss_dssp --TT-EEEEEEES-GGG-SSHHHHHHHHHHHEEEEEEEEEEEEEB-S
T ss_pred -CCCceeEEEHHhhHHhhCCHHHHHHHHHHHcCCCeEEEEeeccCCC
Confidence 145699998766532 4678899999999999988755443
No 238
>PRK14903 16S rRNA methyltransferase B; Provisional
Probab=95.76 E-value=0.23 Score=47.42 Aligned_cols=101 Identities=17% Similarity=0.250 Sum_probs=64.3
Q ss_pred hCCCCCCCEEEEECCCHHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHH----HcCCceeeecCCCCcchHHHHHHHHHh
Q 017793 178 RANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIAR----NLGADETAKVSTDIEDVDTDVGKIQNA 252 (366)
Q Consensus 178 ~~~~~~~~~vlI~G~g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~~~~~ 252 (366)
..+.++|++||=.|||+ |.-+++++..++ ...|++++.++++.+.++ ++|.+.+.....+..++ ...
T Consensus 232 ~l~~~~g~~VLD~cagp-Ggkt~~la~~~~~~g~V~a~Dis~~rl~~~~~n~~r~g~~~v~~~~~Da~~l----~~~--- 303 (431)
T PRK14903 232 LMELEPGLRVLDTCAAP-GGKTTAIAELMKDQGKILAVDISREKIQLVEKHAKRLKLSSIEIKIADAERL----TEY--- 303 (431)
T ss_pred HhCCCCCCEEEEeCCCc-cHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEECchhhh----hhh---
Confidence 35678999988888766 656667777663 338999999999987775 45665432222221111 111
Q ss_pred hCCCCcEEEE---cCCCh-------------------------HHHHHHHHhhcCCceEEEE
Q 017793 253 MGSGIDVSFD---CVGFD-------------------------KTMSTALNATRPGGKVCLI 286 (366)
Q Consensus 253 ~~~~~d~vld---~~g~~-------------------------~~~~~~~~~l~~~G~~v~~ 286 (366)
..+.||.|+- |+|.. ..+..+++.|++||.++..
T Consensus 304 ~~~~fD~Vl~DaPCsg~G~~~~~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYs 365 (431)
T PRK14903 304 VQDTFDRILVDAPCTSLGTARNHPEVLRRVNKEDFKKLSEIQLRIVSQAWKLLEKGGILLYS 365 (431)
T ss_pred hhccCCEEEECCCCCCCccccCChHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 1346999974 44332 1355788899999997754
No 239
>TIGR03215 ac_ald_DH_ac acetaldehyde dehydrogenase (acetylating). Members of this protein family are acetaldehyde dehydrogenase (acetylating), EC 1.2.1.10. This enzyme oxidizes acetaldehyde, using NAD(+), and attaches coenzyme A (CoA), yielding acetyl-CoA. It occurs as a late step in the meta-cleavage pathways of a variety of compounds, including catechol, biphenyl, toluene, salicylate, etc.
Probab=95.76 E-value=0.14 Score=45.74 Aligned_cols=88 Identities=27% Similarity=0.332 Sum_probs=57.9
Q ss_pred EEEEECCCHHHHH-HHHHHHHCCCCeEEEEcCChhH--HHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793 186 NVMIMGSGPIGLV-TLLAARAFGAPRIIITDVDVQR--LSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD 262 (366)
Q Consensus 186 ~vlI~G~g~vG~~-ai~la~~~g~~~vv~v~~~~~~--~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld 262 (366)
+|.|+|+|.+|.. +..+.+..+++.+.+++.++++ .++++++|...... ++. .+.. ...+|+|++
T Consensus 3 rVAIIG~G~IG~~h~~~ll~~~~~elvaV~d~d~es~~la~A~~~Gi~~~~~------~~e----~ll~--~~dIDaV~i 70 (285)
T TIGR03215 3 KVAIIGSGNIGTDLMYKLLRSEHLEMVAMVGIDPESDGLARARELGVKTSAE------GVD----GLLA--NPDIDIVFD 70 (285)
T ss_pred EEEEEeCcHHHHHHHHHHHhCCCcEEEEEEeCCcccHHHHHHHHCCCCEEEC------CHH----HHhc--CCCCCEEEE
Confidence 6889999999974 4666665567545555555554 45677788654321 222 2221 246999999
Q ss_pred cCCChHHHHHHHHhhcCCceEEE
Q 017793 263 CVGFDKTMSTALNATRPGGKVCL 285 (366)
Q Consensus 263 ~~g~~~~~~~~~~~l~~~G~~v~ 285 (366)
+.+...+...+...+..|-.++.
T Consensus 71 aTp~~~H~e~a~~al~aGk~VId 93 (285)
T TIGR03215 71 ATSAKAHARHARLLAELGKIVID 93 (285)
T ss_pred CCCcHHHHHHHHHHHHcCCEEEE
Confidence 99998888777777666655544
No 240
>PRK05872 short chain dehydrogenase; Provisional
Probab=95.73 E-value=0.1 Score=47.10 Aligned_cols=81 Identities=27% Similarity=0.388 Sum_probs=53.3
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHH-HHHcCCc-ee----eecCCCCcchHHHHHHHHHhhCC
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARNLGAD-ET----AKVSTDIEDVDTDVGKIQNAMGS 255 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~lg~~-~~----~~~~~~~~~~~~~~~~~~~~~~~ 255 (366)
++.++||.| +|++|...++.+...|+ .|+.+++++++.+. .++++.. .+ .|. ++..+....+.++.+. -+
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv-~d~~~v~~~~~~~~~~-~g 84 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGA-KLALVDLEEAELAALAAELGGDDRVLTVVADV-TDLAAMQAAAEEAVER-FG 84 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCCcEEEEEecC-CCHHHHHHHHHHHHHH-cC
Confidence 468999998 69999999999988999 67777787776553 4455421 11 232 2223333444444332 25
Q ss_pred CCcEEEEcCCC
Q 017793 256 GIDVSFDCVGF 266 (366)
Q Consensus 256 ~~d~vld~~g~ 266 (366)
++|+++++.|.
T Consensus 85 ~id~vI~nAG~ 95 (296)
T PRK05872 85 GIDVVVANAGI 95 (296)
T ss_pred CCCEEEECCCc
Confidence 79999999985
No 241
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=95.72 E-value=0.041 Score=49.02 Aligned_cols=45 Identities=22% Similarity=0.296 Sum_probs=38.9
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH
Q 017793 182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN 226 (366)
Q Consensus 182 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~ 226 (366)
.++.+++|+|+|+.+.+++.-++..|+.++.++.++.+|.+.+.+
T Consensus 124 ~~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~ 168 (283)
T COG0169 124 VTGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELAD 168 (283)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence 458999999999999999999999998889999898888765544
No 242
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=95.71 E-value=0.33 Score=39.32 Aligned_cols=86 Identities=12% Similarity=0.088 Sum_probs=51.8
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793 183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD 262 (366)
Q Consensus 183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld 262 (366)
.|.+|||.|+|.+|..-++.+...|+ .|.+++ ++..+.+++++.-.. . . ..+. ...-.++|+|+-
T Consensus 12 ~~~~vlVvGGG~va~rka~~Ll~~ga-~V~VIs--p~~~~~l~~l~~i~~-~--~--~~~~-------~~dl~~a~lVia 76 (157)
T PRK06719 12 HNKVVVIIGGGKIAYRKASGLKDTGA-FVTVVS--PEICKEMKELPYITW-K--Q--KTFS-------NDDIKDAHLIYA 76 (157)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEc--CccCHHHHhccCcEE-E--e--cccC-------hhcCCCceEEEE
Confidence 47899999999999988888777898 565653 443333444542111 1 1 1111 111357999999
Q ss_pred cCCChHHHHHHHHhhcCCceEE
Q 017793 263 CVGFDKTMSTALNATRPGGKVC 284 (366)
Q Consensus 263 ~~g~~~~~~~~~~~l~~~G~~v 284 (366)
+.+.++ .+..+..+++.+.++
T Consensus 77 aT~d~e-~N~~i~~~a~~~~~v 97 (157)
T PRK06719 77 ATNQHA-VNMMVKQAAHDFQWV 97 (157)
T ss_pred CCCCHH-HHHHHHHHHHHCCcE
Confidence 998764 555555554443333
No 243
>PRK08300 acetaldehyde dehydrogenase; Validated
Probab=95.70 E-value=0.13 Score=46.12 Aligned_cols=92 Identities=25% Similarity=0.304 Sum_probs=58.1
Q ss_pred CEEEEECCCHHHHH-HHHHHHHCCCCeEEEEcCChh--HHHHHHHcCCceeeecCCCCcchHHHHHHHHHh-hCCCCcEE
Q 017793 185 TNVMIMGSGPIGLV-TLLAARAFGAPRIIITDVDVQ--RLSIARNLGADETAKVSTDIEDVDTDVGKIQNA-MGSGIDVS 260 (366)
Q Consensus 185 ~~vlI~G~g~vG~~-ai~la~~~g~~~vv~v~~~~~--~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~v 260 (366)
-++.|+|+|.+|.. +..+.+.-+++.+.+++.+++ ...+++++|..... .++.. +.+. .-..+|+|
T Consensus 5 lrVAIIGtG~IGt~hm~~l~~~~~velvAVvdid~es~gla~A~~~Gi~~~~------~~ie~----LL~~~~~~dIDiV 74 (302)
T PRK08300 5 LKVAIIGSGNIGTDLMIKILRSEHLEPGAMVGIDPESDGLARARRLGVATSA------EGIDG----LLAMPEFDDIDIV 74 (302)
T ss_pred CeEEEEcCcHHHHHHHHHHhcCCCcEEEEEEeCChhhHHHHHHHHcCCCccc------CCHHH----HHhCcCCCCCCEE
Confidence 47899999999986 555555456755555656554 34567778754321 12222 2220 01569999
Q ss_pred EEcCCChHHHHHHHHhhcCCceEEEE
Q 017793 261 FDCVGFDKTMSTALNATRPGGKVCLI 286 (366)
Q Consensus 261 ld~~g~~~~~~~~~~~l~~~G~~v~~ 286 (366)
|++.+...+...+..++..|-.++..
T Consensus 75 f~AT~a~~H~e~a~~a~eaGk~VID~ 100 (302)
T PRK08300 75 FDATSAGAHVRHAAKLREAGIRAIDL 100 (302)
T ss_pred EECCCHHHHHHHHHHHHHcCCeEEEC
Confidence 99999887777776666666555554
No 244
>PRK07806 short chain dehydrogenase; Provisional
Probab=95.70 E-value=0.37 Score=41.99 Aligned_cols=103 Identities=20% Similarity=0.249 Sum_probs=58.6
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCCh-hHHH-HH---HHcCCce-e--eecCCCCcchHHHHHHHHHhh
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDV-QRLS-IA---RNLGADE-T--AKVSTDIEDVDTDVGKIQNAM 253 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~-~~~~-~~---~~lg~~~-~--~~~~~~~~~~~~~~~~~~~~~ 253 (366)
.+.++||.| +|.+|...+..+...|. .|+++.++. ++.+ .. +..+... . .|+ ++.++..+.+.++.. .
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~-~ 81 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGA-HVVVNYRQKAPRANKVVAEIEAAGGRASAVGADL-TDEESVAALMDTARE-E 81 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCC-CCHHHHHHHHHHHHH-h
Confidence 357899998 69999998888888898 566655543 3322 22 2223221 1 122 222233333333322 1
Q ss_pred CCCCcEEEEcCCCh-------------------HHHHHHHHhhcCCceEEEEcc
Q 017793 254 GSGIDVSFDCVGFD-------------------KTMSTALNATRPGGKVCLIGL 288 (366)
Q Consensus 254 ~~~~d~vld~~g~~-------------------~~~~~~~~~l~~~G~~v~~g~ 288 (366)
.+++|+++.+.+.. ...+.+...+..+|+++.++.
T Consensus 82 ~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS 135 (248)
T PRK07806 82 FGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTS 135 (248)
T ss_pred CCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeC
Confidence 24689999887642 133445555556788887764
No 245
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=95.69 E-value=0.11 Score=46.00 Aligned_cols=80 Identities=21% Similarity=0.239 Sum_probs=50.3
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc-CCce-e--eecCCCCcchHHHHHHHHHhhCCCC
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL-GADE-T--AKVSTDIEDVDTDVGKIQNAMGSGI 257 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l-g~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (366)
++.++||.| +|++|...++.+...|+ +|+.+++++++.+.+.+. +... . .|. .+..+..+.+.++.+. -+.+
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~-~g~i 80 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGA-RVAVLDKSAAGLQELEAAHGDAVVGVEGDV-RSLDDHKEAVARCVAA-FGKI 80 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCceEEEEecc-CCHHHHHHHHHHHHHH-hCCC
Confidence 467899998 68999998888888899 677787877766555442 3211 1 121 1222333334333322 2568
Q ss_pred cEEEEcCC
Q 017793 258 DVSFDCVG 265 (366)
Q Consensus 258 d~vld~~g 265 (366)
|+++.+.|
T Consensus 81 d~li~~Ag 88 (262)
T TIGR03325 81 DCLIPNAG 88 (262)
T ss_pred CEEEECCC
Confidence 99999986
No 246
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=95.69 E-value=0.4 Score=42.88 Aligned_cols=61 Identities=26% Similarity=0.355 Sum_probs=46.8
Q ss_pred HHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEE--cCChhHHHHHHHcCCceeee
Q 017793 174 HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIIT--DVDVQRLSIARNLGADETAK 234 (366)
Q Consensus 174 ~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v--~~~~~~~~~~~~lg~~~~~~ 234 (366)
++.+++.++||.+|+=-=+|..|+....+|+..|.+.++++ .-+.+|..+++.+|+..+..
T Consensus 52 ~Ae~~G~l~pG~tIVE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t 114 (300)
T COG0031 52 DAEKRGLLKPGGTIVEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILT 114 (300)
T ss_pred HHHHcCCCCCCCEEEEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEc
Confidence 34456789999955443479999999999999999655555 34678999999999976644
No 247
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=95.69 E-value=0.39 Score=40.81 Aligned_cols=93 Identities=15% Similarity=0.179 Sum_probs=57.9
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChh-HHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEE
Q 017793 183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQ-RLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF 261 (366)
Q Consensus 183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~-~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl 261 (366)
.|.+|||.|+|.+|...++.+...|+ .|.+++.... ....+.+.|- +... . .++... . -.++++||
T Consensus 8 ~gk~vlVvGgG~va~rk~~~Ll~~ga-~VtVvsp~~~~~l~~l~~~~~--i~~~-~--~~~~~~--d-----l~~~~lVi 74 (205)
T TIGR01470 8 EGRAVLVVGGGDVALRKARLLLKAGA-QLRVIAEELESELTLLAEQGG--ITWL-A--RCFDAD--I-----LEGAFLVI 74 (205)
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCC-EEEEEcCCCCHHHHHHHHcCC--EEEE-e--CCCCHH--H-----hCCcEEEE
Confidence 36799999999999999999999999 5666654432 2222233331 1111 1 111111 1 24799999
Q ss_pred EcCCChHHHHHHHHhhcCCceEEEEcc
Q 017793 262 DCVGFDKTMSTALNATRPGGKVCLIGL 288 (366)
Q Consensus 262 d~~g~~~~~~~~~~~l~~~G~~v~~g~ 288 (366)
-+.+.++.-.......+..|..+-.-.
T Consensus 75 ~at~d~~ln~~i~~~a~~~~ilvn~~d 101 (205)
T TIGR01470 75 AATDDEELNRRVAHAARARGVPVNVVD 101 (205)
T ss_pred ECCCCHHHHHHHHHHHHHcCCEEEECC
Confidence 999987555556666667777665443
No 248
>PLN02781 Probable caffeoyl-CoA O-methyltransferase
Probab=95.68 E-value=0.19 Score=43.75 Aligned_cols=105 Identities=18% Similarity=0.213 Sum_probs=67.4
Q ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHHHHhh
Q 017793 179 ANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAM 253 (366)
Q Consensus 179 ~~~~~~~~vlI~G~g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (366)
.+..++.+||-+|+|. |..++.+++.++ ..++++++.+++..+.+++ .|...-+.+.. .+..+.+.++....
T Consensus 64 ~~~~~~~~vLEiGt~~-G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~--gda~~~L~~l~~~~ 140 (234)
T PLN02781 64 VKIMNAKNTLEIGVFT-GYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQ--SDALSALDQLLNND 140 (234)
T ss_pred HHHhCCCEEEEecCcc-cHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE--ccHHHHHHHHHhCC
Confidence 4455678999999754 666777777653 4489999999988777654 45432222211 34444454443211
Q ss_pred -CCCCcEEEEcCCC---hHHHHHHHHhhcCCceEEEE
Q 017793 254 -GSGIDVSFDCVGF---DKTMSTALNATRPGGKVCLI 286 (366)
Q Consensus 254 -~~~~d~vld~~g~---~~~~~~~~~~l~~~G~~v~~ 286 (366)
...||+||--... ...+..+.+.|++||.++.-
T Consensus 141 ~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~GG~ii~d 177 (234)
T PLN02781 141 PKPEFDFAFVDADKPNYVHFHEQLLKLVKVGGIIAFD 177 (234)
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 3579999755432 24567788999999987753
No 249
>TIGR00477 tehB tellurite resistance protein TehB. Part of a tellurite-reducing operon tehA and tehB
Probab=95.64 E-value=0.07 Score=45.04 Aligned_cols=95 Identities=18% Similarity=0.277 Sum_probs=58.8
Q ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc----CCceeeecCCCCcchHHHHHHHHHhhC
Q 017793 179 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GADETAKVSTDIEDVDTDVGKIQNAMG 254 (366)
Q Consensus 179 ~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (366)
....++.+||-.|||. |..++.+++. |. .|++++.+++-.+.+++. +.. + .. ...+... .. ..
T Consensus 26 ~~~~~~~~vLDiGcG~-G~~a~~la~~-g~-~V~~iD~s~~~l~~a~~~~~~~~~~-v-~~--~~~d~~~----~~--~~ 92 (195)
T TIGR00477 26 VKTVAPCKTLDLGCGQ-GRNSLYLSLA-GY-DVRAWDHNPASIASVLDMKARENLP-L-RT--DAYDINA----AA--LN 92 (195)
T ss_pred hccCCCCcEEEeCCCC-CHHHHHHHHC-CC-eEEEEECCHHHHHHHHHHHHHhCCC-c-ee--Eeccchh----cc--cc
Confidence 3344567899999876 7788888874 77 799999998877665432 322 1 10 0011110 00 13
Q ss_pred CCCcEEEEcCC-----C---hHHHHHHHHhhcCCceEEEE
Q 017793 255 SGIDVSFDCVG-----F---DKTMSTALNATRPGGKVCLI 286 (366)
Q Consensus 255 ~~~d~vld~~g-----~---~~~~~~~~~~l~~~G~~v~~ 286 (366)
..+|+|+.+.. . ...+..+.+.|++||.++.+
T Consensus 93 ~~fD~I~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lli~ 132 (195)
T TIGR00477 93 EDYDFIFSTVVFMFLQAGRVPEIIANMQAHTRPGGYNLIV 132 (195)
T ss_pred CCCCEEEEecccccCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 46999976521 1 24667788899999996554
No 250
>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]
Probab=95.62 E-value=0.089 Score=46.58 Aligned_cols=131 Identities=15% Similarity=0.229 Sum_probs=85.8
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCC---------CCcchHHHHHHHHHh
Q 017793 182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVST---------DIEDVDTDVGKIQNA 252 (366)
Q Consensus 182 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~---------~~~~~~~~~~~~~~~ 252 (366)
-++.++|+.|.|-+|+.++-.++..|+ .|-.-+....+.+..+.+|+...-.-.. -.++|...-.++...
T Consensus 162 v~pA~vlv~G~Gvagl~aiata~~lG~-iVt~rdlrm~~Keqv~s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~~~a~ 240 (356)
T COG3288 162 VSPAKVLVIGAGVAGLAAIATAVRLGA-IVTARDLRMFKKEQVESLGAKFLAVEDEESAGGYAKEMSEEFIAKQAELVAE 240 (356)
T ss_pred ccchhhhhhhHHHHHHHHHHHHhhcce-EEehhhhhhHHhhhhhhcccccccccccccCCCccccCCHHHHHHHHHHHHH
Confidence 356788999999999999999999999 6666666777777777777653211111 112333333333344
Q ss_pred hCCCCcEEEEcCCCh------HHHHHHHHhhcCCceEEEEcccC-CCcee--echHhhhcCcEEEEeecc
Q 017793 253 MGSGIDVSFDCVGFD------KTMSTALNATRPGGKVCLIGLAK-TEMTV--ALTPAAAREVDVIGIFRY 313 (366)
Q Consensus 253 ~~~~~d~vld~~g~~------~~~~~~~~~l~~~G~~v~~g~~~-~~~~~--~~~~~~~~~~~~~~~~~~ 313 (366)
.-.++|+||-+.--+ -.....+..|+||+.++.+.... +..+. +-.....+.+++.|...-
T Consensus 241 ~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpGSViVDlAa~~GGNce~t~pg~~v~~~gV~iig~~nl 310 (356)
T COG3288 241 QAKEVDIVITTALIPGRPAPKLVTAEMVASMKPGSVIVDLAAETGGNCELTEPGKVVTKNGVKIIGYTNL 310 (356)
T ss_pred HhcCCCEEEEecccCCCCCchhhHHHHHHhcCCCcEEEEehhhcCCCcccccCCeEEEeCCeEEEeecCc
Confidence 467899999876332 24567889999999999875332 22222 223455677888887543
No 251
>COG4122 Predicted O-methyltransferase [General function prediction only]
Probab=95.59 E-value=0.35 Score=41.28 Aligned_cols=103 Identities=22% Similarity=0.315 Sum_probs=69.5
Q ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHHHHhh
Q 017793 179 ANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAM 253 (366)
Q Consensus 179 ~~~~~~~~vlI~G~g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (366)
.+.+...+||=+|++. |..++.+|..+. -.+++.++.++++.+.+++ .|.+..+..... .+....+.. ..
T Consensus 55 ~~~~~~k~iLEiGT~~-GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~-gdal~~l~~---~~ 129 (219)
T COG4122 55 ARLSGPKRILEIGTAI-GYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLG-GDALDVLSR---LL 129 (219)
T ss_pred HHhcCCceEEEeeccc-CHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEec-CcHHHHHHh---cc
Confidence 4455778899898654 888889999876 3379999999999887765 565543221111 233333332 23
Q ss_pred CCCCcEEEEcCCC---hHHHHHHHHhhcCCceEEEE
Q 017793 254 GSGIDVSFDCVGF---DKTMSTALNATRPGGKVCLI 286 (366)
Q Consensus 254 ~~~~d~vld~~g~---~~~~~~~~~~l~~~G~~v~~ 286 (366)
.+.||+||-=..- +..++.+++.|++||.++.=
T Consensus 130 ~~~fDliFIDadK~~yp~~le~~~~lLr~GGliv~D 165 (219)
T COG4122 130 DGSFDLVFIDADKADYPEYLERALPLLRPGGLIVAD 165 (219)
T ss_pred CCCccEEEEeCChhhCHHHHHHHHHHhCCCcEEEEe
Confidence 5789999643332 35788899999999988764
No 252
>PRK07109 short chain dehydrogenase; Provisional
Probab=95.59 E-value=0.34 Score=44.65 Aligned_cols=81 Identities=23% Similarity=0.271 Sum_probs=50.6
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCcee---eecCCCCcchHHHHHHHHHhhC
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADET---AKVSTDIEDVDTDVGKIQNAMG 254 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~~---~~~~~~~~~~~~~~~~~~~~~~ 254 (366)
.+.++||.| +|++|...++.+...|+ .|+.+++++++.+.+ ++.|.... .|+ ++..+..+.+.++.+. -
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~-~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv-~d~~~v~~~~~~~~~~-~ 83 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGA-KVVLLARGEEGLEALAAEIRAAGGEALAVVADV-ADAEAVQAAADRAEEE-L 83 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEecC-CCHHHHHHHHHHHHHH-C
Confidence 357899998 69999999888888898 677777877665432 23444321 222 2222333333333221 2
Q ss_pred CCCcEEEEcCCC
Q 017793 255 SGIDVSFDCVGF 266 (366)
Q Consensus 255 ~~~d~vld~~g~ 266 (366)
+++|+++++.|.
T Consensus 84 g~iD~lInnAg~ 95 (334)
T PRK07109 84 GPIDTWVNNAMV 95 (334)
T ss_pred CCCCEEEECCCc
Confidence 479999999874
No 253
>PRK07831 short chain dehydrogenase; Provisional
Probab=95.58 E-value=0.14 Score=45.16 Aligned_cols=84 Identities=25% Similarity=0.334 Sum_probs=51.7
Q ss_pred CCCCCEEEEEC-CC-HHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-----cCCceeeecCC---CCcchHHHHHHHH
Q 017793 181 VGPETNVMIMG-SG-PIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-----LGADETAKVST---DIEDVDTDVGKIQ 250 (366)
Q Consensus 181 ~~~~~~vlI~G-~g-~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-----lg~~~~~~~~~---~~~~~~~~~~~~~ 250 (366)
+.++.++||.| +| ++|.+.++.+...|+ .|+.+++++++.+...+ ++...+..+.. +..+....+.++.
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 92 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGA-RVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAV 92 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence 34578999998 45 799999999998999 57777777765543321 34333321111 1223333333332
Q ss_pred HhhCCCCcEEEEcCCC
Q 017793 251 NAMGSGIDVSFDCVGF 266 (366)
Q Consensus 251 ~~~~~~~d~vld~~g~ 266 (366)
+. .+.+|+++.+.|.
T Consensus 93 ~~-~g~id~li~~ag~ 107 (262)
T PRK07831 93 ER-LGRLDVLVNNAGL 107 (262)
T ss_pred HH-cCCCCEEEECCCC
Confidence 22 3579999999984
No 254
>PRK14901 16S rRNA methyltransferase B; Provisional
Probab=95.58 E-value=0.17 Score=48.38 Aligned_cols=104 Identities=18% Similarity=0.231 Sum_probs=64.2
Q ss_pred hCCCCCCCEEEEECCCHHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHH----HcCCceeeecCCCCcchHHHHHHHHHh
Q 017793 178 RANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIAR----NLGADETAKVSTDIEDVDTDVGKIQNA 252 (366)
Q Consensus 178 ~~~~~~~~~vlI~G~g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~~~~~ 252 (366)
....++|++||=.|||+ |..+..+++.++ ...|++++.++++.+.++ .+|.+.+.....+..++... . ..
T Consensus 247 ~l~~~~g~~VLDl~ag~-G~kt~~la~~~~~~g~v~a~D~~~~rl~~~~~n~~r~g~~~v~~~~~D~~~~~~~---~-~~ 321 (434)
T PRK14901 247 LLDPQPGEVILDACAAP-GGKTTHIAELMGDQGEIWAVDRSASRLKKLQENAQRLGLKSIKILAADSRNLLEL---K-PQ 321 (434)
T ss_pred HhCCCCcCEEEEeCCCC-chhHHHHHHHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCeEEEEeCChhhcccc---c-cc
Confidence 35678899988888665 556666776653 237999999999887664 46765433222222111100 0 00
Q ss_pred hCCCCcEEEE---cCCC-------------------------hHHHHHHHHhhcCCceEEEE
Q 017793 253 MGSGIDVSFD---CVGF-------------------------DKTMSTALNATRPGGKVCLI 286 (366)
Q Consensus 253 ~~~~~d~vld---~~g~-------------------------~~~~~~~~~~l~~~G~~v~~ 286 (366)
..+.||.|+- |+|. ...+..+++.|++||+++..
T Consensus 322 ~~~~fD~Vl~DaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~lkpgG~lvys 383 (434)
T PRK14901 322 WRGYFDRILLDAPCSGLGTLHRHPDARWRQTPEKIQELAPLQAELLESLAPLLKPGGTLVYA 383 (434)
T ss_pred ccccCCEEEEeCCCCcccccccCcchhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 1346999874 4442 13467788899999998754
No 255
>PLN02476 O-methyltransferase
Probab=95.56 E-value=0.21 Score=44.36 Aligned_cols=105 Identities=16% Similarity=0.210 Sum_probs=68.6
Q ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHHHHhh
Q 017793 179 ANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAM 253 (366)
Q Consensus 179 ~~~~~~~~vlI~G~g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (366)
.+..+..+||-+|++. |..++.+|+.++ -.++++++.+++..+.+++ .|...-+.+.. .+..+.+.++....
T Consensus 114 ~~~~~ak~VLEIGT~t-GySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~--GdA~e~L~~l~~~~ 190 (278)
T PLN02476 114 VQILGAERCIEVGVYT-GYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKH--GLAAESLKSMIQNG 190 (278)
T ss_pred HHhcCCCeEEEecCCC-CHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE--cCHHHHHHHHHhcc
Confidence 4456678999999644 777778888764 2369999999998777744 56543222222 34455555543211
Q ss_pred -CCCCcEEEEcCCCh---HHHHHHHHhhcCCceEEEE
Q 017793 254 -GSGIDVSFDCVGFD---KTMSTALNATRPGGKVCLI 286 (366)
Q Consensus 254 -~~~~d~vld~~g~~---~~~~~~~~~l~~~G~~v~~ 286 (366)
...||.||--.... ..++.+++.|++||.++.=
T Consensus 191 ~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~GGvIV~D 227 (278)
T PLN02476 191 EGSSYDFAFVDADKRMYQDYFELLLQLVRVGGVIVMD 227 (278)
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHHHhcCCCcEEEEe
Confidence 35799996554432 3577888999999987753
No 256
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=95.55 E-value=0.11 Score=44.70 Aligned_cols=98 Identities=13% Similarity=0.145 Sum_probs=61.3
Q ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCCce---------------eeecCCCCcch
Q 017793 179 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGADE---------------TAKVSTDIEDV 242 (366)
Q Consensus 179 ~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~---------------~~~~~~~~~~~ 242 (366)
....++.+||+.|||. |.-++-||. .|. .|++++.++...+.+ ++.+... +..+.. |+
T Consensus 33 ~~~~~~~rvL~~gCG~-G~da~~LA~-~G~-~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~---D~ 106 (218)
T PRK13255 33 LALPAGSRVLVPLCGK-SLDMLWLAE-QGH-EVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCG---DF 106 (218)
T ss_pred hCCCCCCeEEEeCCCC-hHhHHHHHh-CCC-eEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEEEEC---cc
Confidence 3456778999999887 788888886 698 799999999877754 3333211 100111 11
Q ss_pred HHHHHHHHHhhCCCCcEEEEcCCC--------hHHHHHHHHhhcCCceEEEE
Q 017793 243 DTDVGKIQNAMGSGIDVSFDCVGF--------DKTMSTALNATRPGGKVCLI 286 (366)
Q Consensus 243 ~~~~~~~~~~~~~~~d~vld~~g~--------~~~~~~~~~~l~~~G~~v~~ 286 (366)
.+ +.......||.|+|..-- ...+..+.+.|+++|+++++
T Consensus 107 ~~----l~~~~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pgG~~~l~ 154 (218)
T PRK13255 107 FA----LTAADLADVDAVYDRAALIALPEEMRERYVQQLAALLPAGCRGLLV 154 (218)
T ss_pred cC----CCcccCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCCCeEEEE
Confidence 11 100012468999985521 13467788899999975543
No 257
>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB. The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles.
Probab=95.54 E-value=0.29 Score=46.73 Aligned_cols=103 Identities=14% Similarity=0.140 Sum_probs=64.3
Q ss_pred HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCce-eeecCCCCcchHHHHHHHHH
Q 017793 177 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR----NLGADE-TAKVSTDIEDVDTDVGKIQN 251 (366)
Q Consensus 177 ~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~----~lg~~~-~~~~~~~~~~~~~~~~~~~~ 251 (366)
.....++|++||=+|||+ |..+.++++..+...+++++.++++.+.++ .+|.+. +.....+...... ..
T Consensus 232 ~~L~~~~g~~VLDlcag~-G~kt~~la~~~~~~~v~a~D~~~~~l~~~~~n~~r~g~~~~v~~~~~d~~~~~~----~~- 305 (426)
T TIGR00563 232 TWLAPQNEETILDACAAP-GGKTTHILELAPQAQVVALDIHEHRLKRVYENLKRLGLTIKAETKDGDGRGPSQ----WA- 305 (426)
T ss_pred HHhCCCCCCeEEEeCCCc-cHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeccccccccc----cc-
Confidence 445678899999988765 556667777665348999999999876654 456552 1111111111100 00
Q ss_pred hhCCCCcEEEE---cCCCh-------------------------HHHHHHHHhhcCCceEEEE
Q 017793 252 AMGSGIDVSFD---CVGFD-------------------------KTMSTALNATRPGGKVCLI 286 (366)
Q Consensus 252 ~~~~~~d~vld---~~g~~-------------------------~~~~~~~~~l~~~G~~v~~ 286 (366)
....||.||- |+|.. ..+..+++.|++||+++..
T Consensus 306 -~~~~fD~VllDaPcSg~G~~~~~p~~~~~~~~~~~~~l~~lQ~~lL~~a~~~LkpgG~lvys 367 (426)
T TIGR00563 306 -ENEQFDRILLDAPCSATGVIRRHPDIKWLRKPRDIAELAELQSEILDAIWPLLKTGGTLVYA 367 (426)
T ss_pred -cccccCEEEEcCCCCCCcccccCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 1346999974 44421 3566788899999998864
No 258
>PRK07574 formate dehydrogenase; Provisional
Probab=95.52 E-value=0.29 Score=45.81 Aligned_cols=92 Identities=21% Similarity=0.229 Sum_probs=61.5
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793 183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD 262 (366)
Q Consensus 183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld 262 (366)
.|.+|.|+|.|.+|....+.++..|+ .|++.+++....+..+.++... + .+ +.++. ...|+|+-
T Consensus 191 ~gktVGIvG~G~IG~~vA~~l~~fG~-~V~~~dr~~~~~~~~~~~g~~~---~----~~----l~ell----~~aDvV~l 254 (385)
T PRK07574 191 EGMTVGIVGAGRIGLAVLRRLKPFDV-KLHYTDRHRLPEEVEQELGLTY---H----VS----FDSLV----SVCDVVTI 254 (385)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCCCCchhhHhhcCcee---c----CC----HHHHh----hcCCEEEE
Confidence 46789999999999999999999999 7888887654444444455321 1 12 22232 35899988
Q ss_pred cCCChHHH-----HHHHHhhcCCceEEEEcccC
Q 017793 263 CVGFDKTM-----STALNATRPGGKVCLIGLAK 290 (366)
Q Consensus 263 ~~g~~~~~-----~~~~~~l~~~G~~v~~g~~~ 290 (366)
+.+-.... ...+..|+++..++-++...
T Consensus 255 ~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~ 287 (385)
T PRK07574 255 HCPLHPETEHLFDADVLSRMKRGSYLVNTARGK 287 (385)
T ss_pred cCCCCHHHHHHhCHHHHhcCCCCcEEEECCCCc
Confidence 77643222 23567788888777665433
No 259
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=95.51 E-value=0.5 Score=40.01 Aligned_cols=46 Identities=24% Similarity=0.370 Sum_probs=38.0
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcCC
Q 017793 183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-NLGA 229 (366)
Q Consensus 183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~lg~ 229 (366)
.|.+++|+|.|.+|..+++.+...|+ +|++++.++++.+.+. .+++
T Consensus 27 ~gk~v~I~G~G~vG~~~A~~L~~~G~-~Vvv~D~~~~~~~~~~~~~g~ 73 (200)
T cd01075 27 EGKTVAVQGLGKVGYKLAEHLLEEGA-KLIVADINEEAVARAAELFGA 73 (200)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCC
Confidence 56889999999999999999999999 7888888888766554 3454
No 260
>PRK06180 short chain dehydrogenase; Provisional
Probab=95.49 E-value=0.12 Score=46.15 Aligned_cols=80 Identities=26% Similarity=0.265 Sum_probs=51.0
Q ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCcee----eecCCCCcchHHHHHHHHHhhCCCCc
Q 017793 184 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADET----AKVSTDIEDVDTDVGKIQNAMGSGID 258 (366)
Q Consensus 184 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~d 258 (366)
+.++||.| +|.+|.+.++.+...|+ +|+++++++++.+.+.+.....+ .|. ++.+.....+++..+. -+++|
T Consensus 4 ~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~-~d~~~~~~~~~~~~~~-~~~~d 80 (277)
T PRK06180 4 MKTWLITGVSSGFGRALAQAALAAGH-RVVGTVRSEAARADFEALHPDRALARLLDV-TDFDAIDAVVADAEAT-FGPID 80 (277)
T ss_pred CCEEEEecCCChHHHHHHHHHHhCcC-EEEEEeCCHHHHHHHHhhcCCCeeEEEccC-CCHHHHHHHHHHHHHH-hCCCC
Confidence 56799998 69999998888888898 68888888877665544322211 122 2222333333333221 24699
Q ss_pred EEEEcCCC
Q 017793 259 VSFDCVGF 266 (366)
Q Consensus 259 ~vld~~g~ 266 (366)
+++.+.|.
T Consensus 81 ~vv~~ag~ 88 (277)
T PRK06180 81 VLVNNAGY 88 (277)
T ss_pred EEEECCCc
Confidence 99999875
No 261
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.48 E-value=0.051 Score=52.33 Aligned_cols=93 Identities=11% Similarity=0.148 Sum_probs=58.4
Q ss_pred hCCCCCCCEEE----EEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCce-eeecCCCCcchHHHHHHHHH
Q 017793 178 RANVGPETNVM----IMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE-TAKVSTDIEDVDTDVGKIQN 251 (366)
Q Consensus 178 ~~~~~~~~~vl----I~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~-~~~~~~~~~~~~~~~~~~~~ 251 (366)
..++++|+++| |+| +|++|.+++|+++..|+ .|+++...+++....+..+.+. +++ .....+...+...
T Consensus 28 l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~d--~~~~~~~~~l~~~-- 102 (450)
T PRK08261 28 LRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGY-DVVANNDGGLTWAAGWGDRFGALVFD--ATGITDPADLKAL-- 102 (450)
T ss_pred ccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCC-eeeecCccccccccCcCCcccEEEEE--CCCCCCHHHHHHH--
Confidence 35678899988 876 79999999999999999 5776655555333333333332 333 2222233333222
Q ss_pred hhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccC
Q 017793 252 AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK 290 (366)
Q Consensus 252 ~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 290 (366)
.......++.|.++|+++.++...
T Consensus 103 ---------------~~~~~~~l~~l~~~griv~i~s~~ 126 (450)
T PRK08261 103 ---------------YEFFHPVLRSLAPCGRVVVLGRPP 126 (450)
T ss_pred ---------------HHHHHHHHHhccCCCEEEEEcccc
Confidence 124566778888889988887543
No 262
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.48 E-value=0.14 Score=45.06 Aligned_cols=81 Identities=17% Similarity=0.176 Sum_probs=48.5
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEE-cCChhHHHHHHHcCCcee-eecCCCCcchHHHHHHHHHhhCCCCcE
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIIT-DVDVQRLSIARNLGADET-AKVSTDIEDVDTDVGKIQNAMGSGIDV 259 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v-~~~~~~~~~~~~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~ 259 (366)
.+.++||.| +|++|...++.+...|++ |+.+ .++++..+.+++.+...+ .|. ++..+..+.+.++.+. -+++|+
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~~-v~~~~~~~~~~~~~l~~~~~~~~~~Dl-~~~~~~~~~~~~~~~~-~~~id~ 82 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGAK-VAVLYNSAENEAKELREKGVFTIKCDV-GNRDQVKKSKEVVEKE-FGRVDV 82 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEEeCCcHHHHHHHHhCCCeEEEecC-CCHHHHHHHHHHHHHH-cCCCCE
Confidence 367899998 699999988888888984 5554 344444444444333221 222 2233444444444332 357999
Q ss_pred EEEcCCC
Q 017793 260 SFDCVGF 266 (366)
Q Consensus 260 vld~~g~ 266 (366)
++.+.|.
T Consensus 83 li~~ag~ 89 (255)
T PRK06463 83 LVNNAGI 89 (255)
T ss_pred EEECCCc
Confidence 9999875
No 263
>PRK07814 short chain dehydrogenase; Provisional
Probab=95.48 E-value=0.17 Score=44.78 Aligned_cols=81 Identities=20% Similarity=0.261 Sum_probs=50.0
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-Hc---CCc-ee--eecCCCCcchHHHHHHHHHhhC
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-NL---GAD-ET--AKVSTDIEDVDTDVGKIQNAMG 254 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~l---g~~-~~--~~~~~~~~~~~~~~~~~~~~~~ 254 (366)
++.++||.| +|.+|...++.+...|+ .|+.+++++++.+.+. ++ +.. .. .|+ ++.....+.+.++.+. -
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~-~ 85 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGA-DVLIAARTESQLDEVAEQIRAAGRRAHVVAADL-AHPEATAGLAGQAVEA-F 85 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccC-CCHHHHHHHHHHHHHH-c
Confidence 468899998 68999999988888899 6777878776654332 22 222 11 222 2222233333333322 2
Q ss_pred CCCcEEEEcCCC
Q 017793 255 SGIDVSFDCVGF 266 (366)
Q Consensus 255 ~~~d~vld~~g~ 266 (366)
+++|+++.+.|.
T Consensus 86 ~~id~vi~~Ag~ 97 (263)
T PRK07814 86 GRLDIVVNNVGG 97 (263)
T ss_pred CCCCEEEECCCC
Confidence 479999998873
No 264
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.45 E-value=0.2 Score=43.71 Aligned_cols=81 Identities=21% Similarity=0.313 Sum_probs=50.2
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCce-eeecC-CCCcchHHHHHHHHHhhCC
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGS 255 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~ 255 (366)
++.++||.| +|++|...++.+...|. +|+.+++++++.+.+ +..+... .+..+ .+.....+.+..+.+. .+
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~ 81 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGA-KLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAED-FG 81 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH-cC
Confidence 467899998 59999999998888898 688888877654432 2233321 11111 1222333333333321 24
Q ss_pred CCcEEEEcCC
Q 017793 256 GIDVSFDCVG 265 (366)
Q Consensus 256 ~~d~vld~~g 265 (366)
++|.+|.+.|
T Consensus 82 ~id~vi~~ag 91 (253)
T PRK08217 82 QLNGLINNAG 91 (253)
T ss_pred CCCEEEECCC
Confidence 7899999987
No 265
>PRK08177 short chain dehydrogenase; Provisional
Probab=95.43 E-value=0.13 Score=44.26 Aligned_cols=78 Identities=21% Similarity=0.240 Sum_probs=48.3
Q ss_pred CEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecC-CCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793 185 TNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVS-TDIEDVDTDVGKIQNAMGSGIDVSFD 262 (366)
Q Consensus 185 ~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~vld 262 (366)
.+++|.| +|++|...+..+...|+ .|+++++++++.+.+++++.......+ .+.+++.+..+.+ ...++|+++.
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~---~~~~id~vi~ 77 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGW-QVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRL---QGQRFDLLFV 77 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCC-EEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHh---hcCCCCEEEE
Confidence 4689998 69999988877777898 788888877766555554322221111 1122222333222 2357999999
Q ss_pred cCCC
Q 017793 263 CVGF 266 (366)
Q Consensus 263 ~~g~ 266 (366)
+.|.
T Consensus 78 ~ag~ 81 (225)
T PRK08177 78 NAGI 81 (225)
T ss_pred cCcc
Confidence 8764
No 266
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=95.42 E-value=0.34 Score=38.47 Aligned_cols=32 Identities=28% Similarity=0.474 Sum_probs=28.0
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCCeEEEEcCC
Q 017793 186 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVD 217 (366)
Q Consensus 186 ~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~ 217 (366)
+|+|.|+|++|...+..+.+.|..++..+|.+
T Consensus 1 ~VliiG~GglGs~ia~~L~~~Gv~~i~ivD~d 32 (143)
T cd01483 1 RVLLVGLGGLGSEIALNLARSGVGKITLIDFD 32 (143)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEEcCC
Confidence 58999999999999999999999888888654
No 267
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=95.41 E-value=0.13 Score=45.40 Aligned_cols=82 Identities=21% Similarity=0.246 Sum_probs=51.4
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcCCc-eeeecC-CCCcchHHHHHHHHHhhCCCCc
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-NLGAD-ETAKVS-TDIEDVDTDVGKIQNAMGSGID 258 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~lg~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~d 258 (366)
++.++||.| +|++|...++.+...|+ .|+.+++++++.+.+. +++.. ..+..+ .+..+....+.++.+. -+.+|
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g~id 82 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGA-RVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDA-FGKLD 82 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHh-cCCCC
Confidence 467899998 68999998888888899 6777878777665443 33321 111111 2222333444444332 34799
Q ss_pred EEEEcCCC
Q 017793 259 VSFDCVGF 266 (366)
Q Consensus 259 ~vld~~g~ 266 (366)
+++.+.|.
T Consensus 83 ~li~~ag~ 90 (263)
T PRK06200 83 CFVGNAGI 90 (263)
T ss_pred EEEECCCC
Confidence 99999873
No 268
>PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed
Probab=95.38 E-value=0.19 Score=42.62 Aligned_cols=98 Identities=14% Similarity=0.109 Sum_probs=63.6
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHHHHhhCCCCc
Q 017793 183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAMGSGID 258 (366)
Q Consensus 183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 258 (366)
++.+||-+|||. |..+..+++......+++++.+++..+.+++ .+...+.... .+....+... .....+|
T Consensus 40 ~~~~VLDiGcGt-G~~~~~la~~~p~~~v~gVD~s~~~i~~a~~~~~~~~~~~v~~~~---~d~~~~l~~~--~~~~~~D 113 (202)
T PRK00121 40 DAPIHLEIGFGK-GEFLVEMAKANPDINFIGIEVHEPGVGKALKKIEEEGLTNLRLLC---GDAVEVLLDM--FPDGSLD 113 (202)
T ss_pred CCCeEEEEccCC-CHHHHHHHHHCCCccEEEEEechHHHHHHHHHHHHcCCCCEEEEe---cCHHHHHHHH--cCccccc
Confidence 678888899877 8788888887644479999999988877754 2333221111 1221122111 1145689
Q ss_pred EEEEcCC--------------ChHHHHHHHHhhcCCceEEEE
Q 017793 259 VSFDCVG--------------FDKTMSTALNATRPGGKVCLI 286 (366)
Q Consensus 259 ~vld~~g--------------~~~~~~~~~~~l~~~G~~v~~ 286 (366)
.|+-... ....+..+.+.|+++|.++..
T Consensus 114 ~V~~~~~~p~~~~~~~~~~~~~~~~l~~i~~~LkpgG~l~i~ 155 (202)
T PRK00121 114 RIYLNFPDPWPKKRHHKRRLVQPEFLALYARKLKPGGEIHFA 155 (202)
T ss_pred eEEEECCCCCCCccccccccCCHHHHHHHHHHcCCCCEEEEE
Confidence 8876432 134678889999999999875
No 269
>PRK09186 flagellin modification protein A; Provisional
Probab=95.36 E-value=0.44 Score=41.74 Aligned_cols=80 Identities=24% Similarity=0.346 Sum_probs=49.3
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHH-HHHc----CCce----eeecCCCCcchHHHHHHHHHh
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARNL----GADE----TAKVSTDIEDVDTDVGKIQNA 252 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~l----g~~~----~~~~~~~~~~~~~~~~~~~~~ 252 (366)
++.++||.| +|.+|...+..+...|+ .|+.+.+++++.+. ++++ +... ..|. ++...+.+.+.++...
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl-~d~~~~~~~~~~~~~~ 80 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGG-IVIAADIDKEALNELLESLGKEFKSKKLSLVELDI-TDQESLEEFLSKSAEK 80 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHHHhhcCCCceeEEEecC-CCHHHHHHHHHHHHHH
Confidence 467899998 68999998888888898 67777777666543 2332 2221 1222 2223333444443322
Q ss_pred hCCCCcEEEEcCC
Q 017793 253 MGSGIDVSFDCVG 265 (366)
Q Consensus 253 ~~~~~d~vld~~g 265 (366)
-+++|+++.+.+
T Consensus 81 -~~~id~vi~~A~ 92 (256)
T PRK09186 81 -YGKIDGAVNCAY 92 (256)
T ss_pred -cCCccEEEECCc
Confidence 346999999885
No 270
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=95.36 E-value=0.27 Score=42.03 Aligned_cols=34 Identities=26% Similarity=0.386 Sum_probs=30.2
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCC
Q 017793 184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD 217 (366)
Q Consensus 184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~ 217 (366)
..+|+|.|+|++|...++.+.+.|..++..+|.+
T Consensus 28 ~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D 61 (212)
T PRK08644 28 KAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFD 61 (212)
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 4679999999999999998888999889888776
No 271
>PLN03139 formate dehydrogenase; Provisional
Probab=95.35 E-value=0.32 Score=45.53 Aligned_cols=91 Identities=16% Similarity=0.203 Sum_probs=61.1
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793 183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD 262 (366)
Q Consensus 183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld 262 (366)
.|.+|.|+|.|.+|...++.++..|+ +|++.+++....+..++.|+... .+ +.++. ...|+|+-
T Consensus 198 ~gktVGIVG~G~IG~~vA~~L~afG~-~V~~~d~~~~~~~~~~~~g~~~~-------~~----l~ell----~~sDvV~l 261 (386)
T PLN03139 198 EGKTVGTVGAGRIGRLLLQRLKPFNC-NLLYHDRLKMDPELEKETGAKFE-------ED----LDAML----PKCDVVVI 261 (386)
T ss_pred CCCEEEEEeecHHHHHHHHHHHHCCC-EEEEECCCCcchhhHhhcCceec-------CC----HHHHH----hhCCEEEE
Confidence 47799999999999999999999999 68888876544445455554211 12 22232 34789887
Q ss_pred cCCChHHH-----HHHHHhhcCCceEEEEccc
Q 017793 263 CVGFDKTM-----STALNATRPGGKVCLIGLA 289 (366)
Q Consensus 263 ~~g~~~~~-----~~~~~~l~~~G~~v~~g~~ 289 (366)
+.+..... ...+..|+++..++-++..
T Consensus 262 ~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG 293 (386)
T PLN03139 262 NTPLTEKTRGMFNKERIAKMKKGVLIVNNARG 293 (386)
T ss_pred eCCCCHHHHHHhCHHHHhhCCCCeEEEECCCC
Confidence 77643211 2356778888877766543
No 272
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=95.33 E-value=0.25 Score=45.48 Aligned_cols=34 Identities=29% Similarity=0.509 Sum_probs=30.4
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCC
Q 017793 184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD 217 (366)
Q Consensus 184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~ 217 (366)
..+|+|.|+|++|..+++.+...|...+..+|.+
T Consensus 24 ~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D 57 (339)
T PRK07688 24 EKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRD 57 (339)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 4789999999999999999999999889999875
No 273
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=95.33 E-value=0.23 Score=41.07 Aligned_cols=33 Identities=27% Similarity=0.377 Sum_probs=28.6
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCCeEEEEcCCh
Q 017793 186 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV 218 (366)
Q Consensus 186 ~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~ 218 (366)
+|+|.|+|++|...++.+.+.|...+..+|.+.
T Consensus 1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~ 33 (174)
T cd01487 1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDV 33 (174)
T ss_pred CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 589999999999988888889998888887664
No 274
>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases. The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....
Probab=95.32 E-value=0.13 Score=43.66 Aligned_cols=104 Identities=24% Similarity=0.296 Sum_probs=67.8
Q ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHHHHhh-C
Q 017793 181 VGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAM-G 254 (366)
Q Consensus 181 ~~~~~~vlI~G~g~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~-~ 254 (366)
.....+||-+|++. |..++.+|+.+.- .+++.++.++++.+.+++ .|...-+.+.. .+..+.+.++.... .
T Consensus 43 ~~~~k~vLEIGt~~-GySal~la~~l~~~g~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~~--gda~~~l~~l~~~~~~ 119 (205)
T PF01596_consen 43 LTRPKRVLEIGTFT-GYSALWLAEALPEDGKITTIEIDPERAEIARENFRKAGLDDRIEVIE--GDALEVLPELANDGEE 119 (205)
T ss_dssp HHT-SEEEEESTTT-SHHHHHHHHTSTTTSEEEEEESSHHHHHHHHHHHHHTTGGGGEEEEE--S-HHHHHHHHHHTTTT
T ss_pred hcCCceEEEecccc-ccHHHHHHHhhcccceEEEecCcHHHHHHHHHHHHhcCCCCcEEEEE--eccHhhHHHHHhccCC
Confidence 34567999999765 8889999987642 389999999998877754 45433222211 34555566555322 2
Q ss_pred CCCcEEEEcCCCh---HHHHHHHHhhcCCceEEEEc
Q 017793 255 SGIDVSFDCVGFD---KTMSTALNATRPGGKVCLIG 287 (366)
Q Consensus 255 ~~~d~vld~~g~~---~~~~~~~~~l~~~G~~v~~g 287 (366)
+.||.||--..-. ..+..++++|++||.++.=.
T Consensus 120 ~~fD~VFiDa~K~~y~~y~~~~~~ll~~ggvii~DN 155 (205)
T PF01596_consen 120 GQFDFVFIDADKRNYLEYFEKALPLLRPGGVIIADN 155 (205)
T ss_dssp TSEEEEEEESTGGGHHHHHHHHHHHEEEEEEEEEET
T ss_pred CceeEEEEcccccchhhHHHHHhhhccCCeEEEEcc
Confidence 5799995433322 35677889999999887643
No 275
>PRK05866 short chain dehydrogenase; Provisional
Probab=95.32 E-value=0.22 Score=44.96 Aligned_cols=81 Identities=20% Similarity=0.321 Sum_probs=49.8
Q ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCce-eeecC-CCCcchHHHHHHHHHhhCCC
Q 017793 184 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR----NLGADE-TAKVS-TDIEDVDTDVGKIQNAMGSG 256 (366)
Q Consensus 184 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~----~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~ 256 (366)
+.++||.| +|++|...++.+...|+ .|+.++++.++.+.+. +.+.+. .+..+ .+..+..+.+.++.+. -+.
T Consensus 40 ~k~vlItGasggIG~~la~~La~~G~-~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~-~g~ 117 (293)
T PRK05866 40 GKRILLTGASSGIGEAAAEQFARRGA-TVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKR-IGG 117 (293)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-cCC
Confidence 57899998 69999998888877898 6788878876654332 223221 11111 1222333333333322 347
Q ss_pred CcEEEEcCCC
Q 017793 257 IDVSFDCVGF 266 (366)
Q Consensus 257 ~d~vld~~g~ 266 (366)
+|+++.+.|.
T Consensus 118 id~li~~AG~ 127 (293)
T PRK05866 118 VDILINNAGR 127 (293)
T ss_pred CCEEEECCCC
Confidence 9999999874
No 276
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=95.32 E-value=0.29 Score=39.58 Aligned_cols=92 Identities=20% Similarity=0.252 Sum_probs=59.6
Q ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcE
Q 017793 180 NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDV 259 (366)
Q Consensus 180 ~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 259 (366)
..-.|.+++|.|=|.+|.-.++.++.+|+ +|++++.++-+.-.+..-|.... . +.+. -...|+
T Consensus 19 ~~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga-~V~V~e~DPi~alqA~~dGf~v~--------~----~~~a----~~~adi 81 (162)
T PF00670_consen 19 LMLAGKRVVVIGYGKVGKGIARALRGLGA-RVTVTEIDPIRALQAAMDGFEVM--------T----LEEA----LRDADI 81 (162)
T ss_dssp S--TTSEEEEE--SHHHHHHHHHHHHTT--EEEEE-SSHHHHHHHHHTT-EEE-------------HHHH----TTT-SE
T ss_pred eeeCCCEEEEeCCCcccHHHHHHHhhCCC-EEEEEECChHHHHHhhhcCcEec--------C----HHHH----HhhCCE
Confidence 34578999999999999999999999999 89999999887766655565321 1 1222 246899
Q ss_pred EEEcCCChHH-HHHHHHhhcCCceEEEEcc
Q 017793 260 SFDCVGFDKT-MSTALNATRPGGKVCLIGL 288 (366)
Q Consensus 260 vld~~g~~~~-~~~~~~~l~~~G~~v~~g~ 288 (366)
++.+.|.... -...++.|+++..+...|.
T Consensus 82 ~vtaTG~~~vi~~e~~~~mkdgail~n~Gh 111 (162)
T PF00670_consen 82 FVTATGNKDVITGEHFRQMKDGAILANAGH 111 (162)
T ss_dssp EEE-SSSSSSB-HHHHHHS-TTEEEEESSS
T ss_pred EEECCCCccccCHHHHHHhcCCeEEeccCc
Confidence 9999997653 3456678888876665553
No 277
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=95.31 E-value=0.3 Score=42.61 Aligned_cols=34 Identities=26% Similarity=0.420 Sum_probs=29.7
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCC
Q 017793 184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD 217 (366)
Q Consensus 184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~ 217 (366)
+.+|+|.|+|++|..+++.+.+.|..++..+|.+
T Consensus 24 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D 57 (240)
T TIGR02355 24 ASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFD 57 (240)
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 4789999999999999999999999888888643
No 278
>PRK14904 16S rRNA methyltransferase B; Provisional
Probab=95.31 E-value=0.34 Score=46.55 Aligned_cols=100 Identities=21% Similarity=0.273 Sum_probs=62.4
Q ss_pred HhCCCCCCCEEEEECCCHHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHH----HcCCceeeecCCCCcchHHHHHHHHH
Q 017793 177 RRANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIAR----NLGADETAKVSTDIEDVDTDVGKIQN 251 (366)
Q Consensus 177 ~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~~~~ 251 (366)
......+|++||=+|+|+ |..+..+++.++ ...|++++.++++.+.++ .+|.+.+.....+..++ .
T Consensus 244 ~~l~~~~g~~VLDlgaG~-G~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~v~~~~~Da~~~-------~- 314 (445)
T PRK14904 244 LLLNPQPGSTVLDLCAAP-GGKSTFMAELMQNRGQITAVDRYPQKLEKIRSHASALGITIIETIEGDARSF-------S- 314 (445)
T ss_pred HhcCCCCCCEEEEECCCC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHhCCCeEEEEeCccccc-------c-
Confidence 445678899999888655 445555555442 237999999999876664 45665332222221111 1
Q ss_pred hhCCCCcEEEE---cCCCh-------------------------HHHHHHHHhhcCCceEEEE
Q 017793 252 AMGSGIDVSFD---CVGFD-------------------------KTMSTALNATRPGGKVCLI 286 (366)
Q Consensus 252 ~~~~~~d~vld---~~g~~-------------------------~~~~~~~~~l~~~G~~v~~ 286 (366)
....||.|+- |+|.. ..+..+.+.|++||+++..
T Consensus 315 -~~~~fD~Vl~D~Pcsg~g~~~r~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~lkpgG~lvys 376 (445)
T PRK14904 315 -PEEQPDAILLDAPCTGTGVLGRRAELRWKLTPEKLAELVGLQAELLDHAASLLKPGGVLVYA 376 (445)
T ss_pred -cCCCCCEEEEcCCCCCcchhhcCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 1346999974 44432 2466778889999998864
No 279
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.28 E-value=0.17 Score=44.40 Aligned_cols=82 Identities=18% Similarity=0.228 Sum_probs=49.6
Q ss_pred CCCEEEEECC---CHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecC---CCCcchHHHHHHHHHhhCCC
Q 017793 183 PETNVMIMGS---GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVS---TDIEDVDTDVGKIQNAMGSG 256 (366)
Q Consensus 183 ~~~~vlI~G~---g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 256 (366)
.+.++||.|+ +++|.+.++.+...|+ +|+.+.++++..+.++++....+..+. ++..+..+.+.++.+. -+.
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~g~ 83 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGA-TVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKER-VGK 83 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHH-hCC
Confidence 4678999984 5899988887777899 577776665444455554322221111 2223334444444332 246
Q ss_pred CcEEEEcCCC
Q 017793 257 IDVSFDCVGF 266 (366)
Q Consensus 257 ~d~vld~~g~ 266 (366)
+|+++.+.|.
T Consensus 84 iD~lv~nAg~ 93 (252)
T PRK06079 84 IDGIVHAIAY 93 (252)
T ss_pred CCEEEEcccc
Confidence 9999998873
No 280
>PRK07774 short chain dehydrogenase; Provisional
Probab=95.27 E-value=0.17 Score=44.15 Aligned_cols=82 Identities=18% Similarity=0.319 Sum_probs=48.4
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHc---CCce-eeecC-CCCcchHHHHHHHHHhhCC
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL---GADE-TAKVS-TDIEDVDTDVGKIQNAMGS 255 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l---g~~~-~~~~~-~~~~~~~~~~~~~~~~~~~ 255 (366)
.+.++||.| +|.+|...++.+...|. .|+.+++++++.+.+ +++ +... .+..+ ++.........++.+. .+
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~ 82 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGA-SVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSA-FG 82 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH-hC
Confidence 467899998 59999998888887898 677787776554322 222 2111 11111 2222223333333322 24
Q ss_pred CCcEEEEcCCC
Q 017793 256 GIDVSFDCVGF 266 (366)
Q Consensus 256 ~~d~vld~~g~ 266 (366)
++|++|.+.|.
T Consensus 83 ~id~vi~~ag~ 93 (250)
T PRK07774 83 GIDYLVNNAAI 93 (250)
T ss_pred CCCEEEECCCC
Confidence 69999999884
No 281
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=95.27 E-value=0.3 Score=45.02 Aligned_cols=35 Identities=31% Similarity=0.500 Sum_probs=30.6
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCCh
Q 017793 184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV 218 (366)
Q Consensus 184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~ 218 (366)
..+|+|.|+|++|..++..+...|...+..+|.+.
T Consensus 24 ~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D~ 58 (338)
T PRK12475 24 EKHVLIVGAGALGAANAEALVRAGIGKLTIADRDY 58 (338)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 46799999999999999999999998888887753
No 282
>PRK06841 short chain dehydrogenase; Provisional
Probab=95.26 E-value=0.17 Score=44.36 Aligned_cols=82 Identities=21% Similarity=0.258 Sum_probs=51.1
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCcee--eecC-CCCcchHHHHHHHHHhhCCCCc
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADET--AKVS-TDIEDVDTDVGKIQNAMGSGID 258 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~d 258 (366)
++.++||.| +|.+|...++.+...|+ .|+.+.++++..+...++....+ +..+ .+..++...+.++... ..++|
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~~d 91 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGA-RVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISA-FGRID 91 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHH-hCCCC
Confidence 367899998 69999988888888898 67788777766555554432221 1111 1222333333333322 24799
Q ss_pred EEEEcCCC
Q 017793 259 VSFDCVGF 266 (366)
Q Consensus 259 ~vld~~g~ 266 (366)
+++.+.|.
T Consensus 92 ~vi~~ag~ 99 (255)
T PRK06841 92 ILVNSAGV 99 (255)
T ss_pred EEEECCCC
Confidence 99999875
No 283
>PRK14902 16S rRNA methyltransferase B; Provisional
Probab=95.24 E-value=0.41 Score=46.00 Aligned_cols=101 Identities=17% Similarity=0.268 Sum_probs=63.0
Q ss_pred hCCCCCCCEEEEECCCHHHHHHHHHHHHC-CCCeEEEEcCChhHHHHHH----HcCCceeeecCCCCcchHHHHHHHHHh
Q 017793 178 RANVGPETNVMIMGSGPIGLVTLLAARAF-GAPRIIITDVDVQRLSIAR----NLGADETAKVSTDIEDVDTDVGKIQNA 252 (366)
Q Consensus 178 ~~~~~~~~~vlI~G~g~vG~~ai~la~~~-g~~~vv~v~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~~~~~ 252 (366)
...++++++||=.|+|+ |..++.+++.. +...|++++.++++.+.++ ++|.+.+.....+..++. ..+
T Consensus 245 ~l~~~~g~~VLDlgaG~-G~~t~~la~~~~~~~~v~avDi~~~~l~~~~~n~~~~g~~~v~~~~~D~~~~~---~~~--- 317 (444)
T PRK14902 245 ALDPKGGDTVLDACAAP-GGKTTHIAELLKNTGKVVALDIHEHKLKLIEENAKRLGLTNIETKALDARKVH---EKF--- 317 (444)
T ss_pred HhCCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCCccccc---chh---
Confidence 35678899988888665 55666777765 2348999999999877664 356554322222211111 111
Q ss_pred hCCCCcEEEE---cCCC-------------------------hHHHHHHHHhhcCCceEEEE
Q 017793 253 MGSGIDVSFD---CVGF-------------------------DKTMSTALNATRPGGKVCLI 286 (366)
Q Consensus 253 ~~~~~d~vld---~~g~-------------------------~~~~~~~~~~l~~~G~~v~~ 286 (366)
...||.|+- |.|. ...+..+++.|++||+++..
T Consensus 318 -~~~fD~Vl~D~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvys 378 (444)
T PRK14902 318 -AEKFDKILVDAPCSGLGVIRRKPDIKYNKTKEDIESLQEIQLEILESVAQYLKKGGILVYS 378 (444)
T ss_pred -cccCCEEEEcCCCCCCeeeccCcchhhcCCHHHHHHHHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 246999964 3332 12466788899999998853
No 284
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=95.23 E-value=0.34 Score=36.96 Aligned_cols=86 Identities=22% Similarity=0.251 Sum_probs=58.8
Q ss_pred EEEEECCCHHHHHHHHHHHHC--CCCeEEEEcCChhHHHH-HHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793 186 NVMIMGSGPIGLVTLLAARAF--GAPRIIITDVDVQRLSI-ARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD 262 (366)
Q Consensus 186 ~vlI~G~g~vG~~ai~la~~~--g~~~vv~v~~~~~~~~~-~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld 262 (366)
+++|+|+|..|..-..-++.. +.+.+.+++.++++.+. .++++.+ . |. ++.+ +.+ ...+|+|+-
T Consensus 2 ~v~iiG~G~~g~~~~~~~~~~~~~~~v~~v~d~~~~~~~~~~~~~~~~-~--~~----~~~~----ll~--~~~~D~V~I 68 (120)
T PF01408_consen 2 RVGIIGAGSIGRRHLRALLRSSPDFEVVAVCDPDPERAEAFAEKYGIP-V--YT----DLEE----LLA--DEDVDAVII 68 (120)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTTSE-E--ES----SHHH----HHH--HTTESEEEE
T ss_pred EEEEECCcHHHHHHHHHHHhcCCCcEEEEEEeCCHHHHHHHHHHhccc-c--hh----HHHH----HHH--hhcCCEEEE
Confidence 688999999998776555544 45445566777776664 5677876 2 22 2222 322 247999999
Q ss_pred cCCChHHHHHHHHhhcCCceEE
Q 017793 263 CVGFDKTMSTALNATRPGGKVC 284 (366)
Q Consensus 263 ~~g~~~~~~~~~~~l~~~G~~v 284 (366)
+++...+...+..++..|-.++
T Consensus 69 ~tp~~~h~~~~~~~l~~g~~v~ 90 (120)
T PF01408_consen 69 ATPPSSHAEIAKKALEAGKHVL 90 (120)
T ss_dssp ESSGGGHHHHHHHHHHTTSEEE
T ss_pred ecCCcchHHHHHHHHHcCCEEE
Confidence 9999888888888888777543
No 285
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=95.21 E-value=0.68 Score=39.25 Aligned_cols=93 Identities=10% Similarity=0.213 Sum_probs=53.3
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCCh-hH-HHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEE
Q 017793 183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV-QR-LSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS 260 (366)
Q Consensus 183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~-~~-~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v 260 (366)
.+.+|||.|+|.+|...+..+...|+ .|.+++... +. .+++.+ +. + .+... .+... .-.++|+|
T Consensus 9 ~~k~vLVIGgG~va~~ka~~Ll~~ga-~V~VIs~~~~~~l~~l~~~-~~--i-~~~~~--~~~~~-------~l~~adlV 74 (202)
T PRK06718 9 SNKRVVIVGGGKVAGRRAITLLKYGA-HIVVISPELTENLVKLVEE-GK--I-RWKQK--EFEPS-------DIVDAFLV 74 (202)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCCCHHHHHHHhC-CC--E-EEEec--CCChh-------hcCCceEE
Confidence 46799999999999998888887898 566664432 11 122222 21 1 11111 11110 12579999
Q ss_pred EEcCCChHHHHHHHHhhcCCceEEEEcccC
Q 017793 261 FDCVGFDKTMSTALNATRPGGKVCLIGLAK 290 (366)
Q Consensus 261 ld~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 290 (366)
|-+.+.++ .+..+...+..+.++.....+
T Consensus 75 iaaT~d~e-lN~~i~~~a~~~~lvn~~d~~ 103 (202)
T PRK06718 75 IAATNDPR-VNEQVKEDLPENALFNVITDA 103 (202)
T ss_pred EEcCCCHH-HHHHHHHHHHhCCcEEECCCC
Confidence 99999774 454444444445555544333
No 286
>PRK09072 short chain dehydrogenase; Provisional
Probab=95.20 E-value=0.18 Score=44.59 Aligned_cols=81 Identities=22% Similarity=0.335 Sum_probs=48.4
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-Hc--CCc-eeeecC-CCCcchHHHHHHHHHhhCCC
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-NL--GAD-ETAKVS-TDIEDVDTDVGKIQNAMGSG 256 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~l--g~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~ 256 (366)
++.++||.| +|.+|...++.+...|+ .|+++++++++.+.+. ++ +.. ..+..+ .+..........+.+ .+.
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~--~~~ 80 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGA-RLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARARE--MGG 80 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHh--cCC
Confidence 467899998 69999988888888898 6777778777655443 22 111 111111 111222222222222 357
Q ss_pred CcEEEEcCCC
Q 017793 257 IDVSFDCVGF 266 (366)
Q Consensus 257 ~d~vld~~g~ 266 (366)
+|.++.+.|.
T Consensus 81 id~lv~~ag~ 90 (263)
T PRK09072 81 INVLINNAGV 90 (263)
T ss_pred CCEEEECCCC
Confidence 9999999875
No 287
>PRK08339 short chain dehydrogenase; Provisional
Probab=95.19 E-value=0.17 Score=44.73 Aligned_cols=81 Identities=22% Similarity=0.229 Sum_probs=50.5
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-Hc----CCce-eeecC-CCCcchHHHHHHHHHhhC
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-NL----GADE-TAKVS-TDIEDVDTDVGKIQNAMG 254 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~l----g~~~-~~~~~-~~~~~~~~~~~~~~~~~~ 254 (366)
.+.++||.| ++++|.+.++.+...|+ +|+.+++++++.+.+. ++ +... .+..+ ++..+..+.+.++.+ -
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~--~ 83 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGA-DVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKN--I 83 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHh--h
Confidence 467899998 68999998888888999 6777778776654332 22 2221 11111 222334444444322 3
Q ss_pred CCCcEEEEcCCC
Q 017793 255 SGIDVSFDCVGF 266 (366)
Q Consensus 255 ~~~d~vld~~g~ 266 (366)
+++|+++.+.|.
T Consensus 84 g~iD~lv~nag~ 95 (263)
T PRK08339 84 GEPDIFFFSTGG 95 (263)
T ss_pred CCCcEEEECCCC
Confidence 569999999874
No 288
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.16 E-value=0.22 Score=44.33 Aligned_cols=81 Identities=25% Similarity=0.291 Sum_probs=48.5
Q ss_pred CCCEEEEECCC---HHHHHHHHHHHHCCCCeEEEEcCChhHHH----HHHHcCCceee--ecCCCCcchHHHHHHHHHhh
Q 017793 183 PETNVMIMGSG---PIGLVTLLAARAFGAPRIIITDVDVQRLS----IARNLGADETA--KVSTDIEDVDTDVGKIQNAM 253 (366)
Q Consensus 183 ~~~~vlI~G~g---~vG~~ai~la~~~g~~~vv~v~~~~~~~~----~~~~lg~~~~~--~~~~~~~~~~~~~~~~~~~~ 253 (366)
.+.++||.|++ ++|.+.++.+...|+ .|+.+.++++..+ ..+++|....+ |. ++..+..+.+.++.+.
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv-~d~~~v~~~~~~~~~~- 82 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGA-ELAFTYQGEALGKRVKPLAESLGSDFVLPCDV-EDIASVDAVFEALEKK- 82 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCC-EEEEecCchHHHHHHHHHHHhcCCceEEeCCC-CCHHHHHHHHHHHHHH-
Confidence 46789999853 899998888888899 5666666543222 22334533222 22 2223344444444332
Q ss_pred CCCCcEEEEcCCC
Q 017793 254 GSGIDVSFDCVGF 266 (366)
Q Consensus 254 ~~~~d~vld~~g~ 266 (366)
-+.+|+++++.|.
T Consensus 83 ~g~iD~lVnnAG~ 95 (271)
T PRK06505 83 WGKLDFVVHAIGF 95 (271)
T ss_pred hCCCCEEEECCcc
Confidence 2579999999874
No 289
>PRK08703 short chain dehydrogenase; Provisional
Probab=95.12 E-value=0.22 Score=43.25 Aligned_cols=83 Identities=19% Similarity=0.332 Sum_probs=51.0
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HH---cCCce----eeecCC-CCcchHHHHHHHHHh
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RN---LGADE----TAKVST-DIEDVDTDVGKIQNA 252 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~---lg~~~----~~~~~~-~~~~~~~~~~~~~~~ 252 (366)
++.+++|.| +|.+|...++.+...|+ .|+.+++++++.+.+ .+ .+... ..|... ...++.....++...
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~ 83 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGA-TVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA 83 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence 357899998 69999998888888899 688888887765433 22 22111 122211 122333334344333
Q ss_pred hCCCCcEEEEcCCC
Q 017793 253 MGSGIDVSFDCVGF 266 (366)
Q Consensus 253 ~~~~~d~vld~~g~ 266 (366)
.+..+|+++.+.|.
T Consensus 84 ~~~~id~vi~~ag~ 97 (239)
T PRK08703 84 TQGKLDGIVHCAGY 97 (239)
T ss_pred hCCCCCEEEEeccc
Confidence 33578999999884
No 290
>PRK07677 short chain dehydrogenase; Provisional
Probab=95.12 E-value=0.22 Score=43.63 Aligned_cols=81 Identities=25% Similarity=0.272 Sum_probs=49.8
Q ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCc-eeeecC-CCCcchHHHHHHHHHhhCCC
Q 017793 184 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR----NLGAD-ETAKVS-TDIEDVDTDVGKIQNAMGSG 256 (366)
Q Consensus 184 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~----~lg~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~ 256 (366)
+.++||.| +|++|...++.+...|+ .|+++++++++.+.+. +.+.. ..+..+ ++..+..+.+.++.+. .++
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~ 78 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGA-NVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEK-FGR 78 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH-hCC
Confidence 46789998 68999999988888899 7888877776554332 22222 122111 2223333444443332 246
Q ss_pred CcEEEEcCCC
Q 017793 257 IDVSFDCVGF 266 (366)
Q Consensus 257 ~d~vld~~g~ 266 (366)
+|+++.+.|.
T Consensus 79 id~lI~~ag~ 88 (252)
T PRK07677 79 IDALINNAAG 88 (252)
T ss_pred ccEEEECCCC
Confidence 9999999874
No 291
>PRK06398 aldose dehydrogenase; Validated
Probab=95.11 E-value=0.13 Score=45.33 Aligned_cols=76 Identities=18% Similarity=0.269 Sum_probs=46.7
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCce-eeecCCCCcchHHHHHHHHHhhCCCCcEE
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE-TAKVSTDIEDVDTDVGKIQNAMGSGIDVS 260 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~v 260 (366)
.+.++||.| +|++|.+.+..+...|+ .|+.+++++++.. .... ..|. ++..+....+.++.+. -+.+|++
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~-~Vi~~~r~~~~~~-----~~~~~~~D~-~~~~~i~~~~~~~~~~-~~~id~l 76 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGS-NVINFDIKEPSYN-----DVDYFKVDV-SNKEQVIKGIDYVISK-YGRIDIL 76 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCccccC-----ceEEEEccC-CCHHHHHHHHHHHHHH-cCCCCEE
Confidence 367899998 68999998888888899 6777766654321 1111 1122 2223333444443322 3469999
Q ss_pred EEcCCC
Q 017793 261 FDCVGF 266 (366)
Q Consensus 261 ld~~g~ 266 (366)
+.+.|.
T Consensus 77 i~~Ag~ 82 (258)
T PRK06398 77 VNNAGI 82 (258)
T ss_pred EECCCC
Confidence 998874
No 292
>PRK12829 short chain dehydrogenase; Provisional
Probab=95.09 E-value=0.19 Score=44.24 Aligned_cols=84 Identities=21% Similarity=0.250 Sum_probs=51.6
Q ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCc--eeeecC-CCCcchHHHHHHHHHhhCCC
Q 017793 182 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-LGAD--ETAKVS-TDIEDVDTDVGKIQNAMGSG 256 (366)
Q Consensus 182 ~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~ 256 (366)
-++.++||.| +|.+|...++.+...|. .|+.+.++++..+.+.+ +... ..+..+ .+.....+.+.+.... -.+
T Consensus 9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~ 86 (264)
T PRK12829 9 LDGLRVLVTGGASGIGRAIAEAFAEAGA-RVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVER-FGG 86 (264)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHH-hCC
Confidence 4678999998 69999999988888899 57788777665544333 2211 111111 1222333333333222 247
Q ss_pred CcEEEEcCCCh
Q 017793 257 IDVSFDCVGFD 267 (366)
Q Consensus 257 ~d~vld~~g~~ 267 (366)
+|.||.+.|..
T Consensus 87 ~d~vi~~ag~~ 97 (264)
T PRK12829 87 LDVLVNNAGIA 97 (264)
T ss_pred CCEEEECCCCC
Confidence 99999988753
No 293
>PRK10901 16S rRNA methyltransferase B; Provisional
Probab=95.09 E-value=0.49 Score=45.21 Aligned_cols=102 Identities=21% Similarity=0.252 Sum_probs=62.9
Q ss_pred HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHHHHh
Q 017793 177 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNA 252 (366)
Q Consensus 177 ~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~ 252 (366)
.....++|++||=.|||+ |..+..+++..+...|++++.++++.+.+++ +|....+ ...+..+... ..
T Consensus 238 ~~l~~~~g~~VLDlgaG~-G~~t~~la~~~~~~~v~a~D~s~~~l~~~~~n~~~~g~~~~~-~~~D~~~~~~----~~-- 309 (427)
T PRK10901 238 TLLAPQNGERVLDACAAP-GGKTAHILELAPQAQVVALDIDAQRLERVRENLQRLGLKATV-IVGDARDPAQ----WW-- 309 (427)
T ss_pred HHcCCCCCCEEEEeCCCC-ChHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEE-EEcCcccchh----hc--
Confidence 345678999999888765 5566677776543489999999998776643 4543211 1111111111 10
Q ss_pred hCCCCcEEEE---cCCC-------------------------hHHHHHHHHhhcCCceEEEE
Q 017793 253 MGSGIDVSFD---CVGF-------------------------DKTMSTALNATRPGGKVCLI 286 (366)
Q Consensus 253 ~~~~~d~vld---~~g~-------------------------~~~~~~~~~~l~~~G~~v~~ 286 (366)
....||.|+- |.+. ...+..+.+.|++||+++..
T Consensus 310 ~~~~fD~Vl~D~Pcs~~G~~~~~p~~~~~~~~~~l~~l~~~q~~iL~~a~~~LkpGG~lvys 371 (427)
T PRK10901 310 DGQPFDRILLDAPCSATGVIRRHPDIKWLRRPEDIAALAALQSEILDALWPLLKPGGTLLYA 371 (427)
T ss_pred ccCCCCEEEECCCCCcccccccCccccccCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 1346999973 3331 13566788899999998754
No 294
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=95.08 E-value=0.28 Score=45.53 Aligned_cols=35 Identities=31% Similarity=0.500 Sum_probs=30.7
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCCh
Q 017793 184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV 218 (366)
Q Consensus 184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~ 218 (366)
..+|||.|+|++|..+++.+...|+.++..+|.+.
T Consensus 28 ~~~VlivG~GGlGs~~a~~La~~Gvg~i~lvD~D~ 62 (355)
T PRK05597 28 DAKVAVIGAGGLGSPALLYLAGAGVGHITIIDDDT 62 (355)
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 47899999999999999999999998888887543
No 295
>PRK06484 short chain dehydrogenase; Validated
Probab=95.08 E-value=0.59 Score=45.89 Aligned_cols=104 Identities=25% Similarity=0.318 Sum_probs=65.4
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcCCcee---eecCCCCcchHHHHHHHHHhhCCCC
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-NLGADET---AKVSTDIEDVDTDVGKIQNAMGSGI 257 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~lg~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (366)
.+.++||.| ++++|...++.+...|+ .|+.+++++++.+.+. +++.... .|. ++..+..+.+.++.+. -+.+
T Consensus 268 ~~k~~lItGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~-~g~i 344 (520)
T PRK06484 268 SPRVVAITGGARGIGRAVADRFAAAGD-RLLIIDRDAEGAKKLAEALGDEHLSVQADI-TDEAAVESAFAQIQAR-WGRL 344 (520)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEccC-CCHHHHHHHHHHHHHH-cCCC
Confidence 467889998 68999998888888898 6888888777665444 3443321 222 2223333444443332 3579
Q ss_pred cEEEEcCCChH--------------------------HHHHHHHhhcCCceEEEEccc
Q 017793 258 DVSFDCVGFDK--------------------------TMSTALNATRPGGKVCLIGLA 289 (366)
Q Consensus 258 d~vld~~g~~~--------------------------~~~~~~~~l~~~G~~v~~g~~ 289 (366)
|+++.+.|... ..+.++..+..+|+++.++..
T Consensus 345 d~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~ 402 (520)
T PRK06484 345 DVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSI 402 (520)
T ss_pred CEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECch
Confidence 99999887420 123344556667899888643
No 296
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.08 E-value=0.25 Score=43.56 Aligned_cols=82 Identities=17% Similarity=0.254 Sum_probs=47.7
Q ss_pred CCCEEEEECCC---HHHHHHHHHHHHCCCCeEEEEcCChhHH----HHHHHcCCceeeecC-CCCcchHHHHHHHHHhhC
Q 017793 183 PETNVMIMGSG---PIGLVTLLAARAFGAPRIIITDVDVQRL----SIARNLGADETAKVS-TDIEDVDTDVGKIQNAMG 254 (366)
Q Consensus 183 ~~~~vlI~G~g---~vG~~ai~la~~~g~~~vv~v~~~~~~~----~~~~~lg~~~~~~~~-~~~~~~~~~~~~~~~~~~ 254 (366)
.+.++||.|++ ++|.+.++.+...|+ .|+.++++++.. +..++++....+..+ ++.++..+.+.++.+. -
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-~ 86 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGA-ELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEE-W 86 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHH-c
Confidence 46789999843 899988887777899 566666665432 222334432222211 2223344444444332 2
Q ss_pred CCCcEEEEcCCC
Q 017793 255 SGIDVSFDCVGF 266 (366)
Q Consensus 255 ~~~d~vld~~g~ 266 (366)
+.+|+++.+.|.
T Consensus 87 g~ld~lv~nAg~ 98 (258)
T PRK07533 87 GRLDFLLHSIAF 98 (258)
T ss_pred CCCCEEEEcCcc
Confidence 579999998863
No 297
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=95.07 E-value=0.72 Score=34.94 Aligned_cols=92 Identities=17% Similarity=0.132 Sum_probs=60.0
Q ss_pred EEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCCC
Q 017793 187 VMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGF 266 (366)
Q Consensus 187 vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~ 266 (366)
|+|.|.|.+|...++.++..+. .|++++.++++.+.+++.|.. ++.-+... ...+++ .+-..++.++-+.+.
T Consensus 1 vvI~G~g~~~~~i~~~L~~~~~-~vvvid~d~~~~~~~~~~~~~-~i~gd~~~---~~~l~~---a~i~~a~~vv~~~~~ 72 (116)
T PF02254_consen 1 VVIIGYGRIGREIAEQLKEGGI-DVVVIDRDPERVEELREEGVE-VIYGDATD---PEVLER---AGIEKADAVVILTDD 72 (116)
T ss_dssp EEEES-SHHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTSE-EEES-TTS---HHHHHH---TTGGCESEEEEESSS
T ss_pred eEEEcCCHHHHHHHHHHHhCCC-EEEEEECCcHHHHHHHhcccc-cccccchh---hhHHhh---cCccccCEEEEccCC
Confidence 5788999999999999998665 799999999999999988854 33322211 222322 234678999988876
Q ss_pred hHHHH---HHHHhhcCCceEEEE
Q 017793 267 DKTMS---TALNATRPGGKVCLI 286 (366)
Q Consensus 267 ~~~~~---~~~~~l~~~G~~v~~ 286 (366)
...-. ...+.+.+..+++..
T Consensus 73 d~~n~~~~~~~r~~~~~~~ii~~ 95 (116)
T PF02254_consen 73 DEENLLIALLARELNPDIRIIAR 95 (116)
T ss_dssp HHHHHHHHHHHHHHTTTSEEEEE
T ss_pred HHHHHHHHHHHHHHCCCCeEEEE
Confidence 53222 233344556666543
No 298
>PRK08628 short chain dehydrogenase; Provisional
Probab=95.05 E-value=0.18 Score=44.35 Aligned_cols=82 Identities=21% Similarity=0.179 Sum_probs=49.0
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc---CCce-eeecC-CCCcchHHHHHHHHHhhCCC
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL---GADE-TAKVS-TDIEDVDTDVGKIQNAMGSG 256 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l---g~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~ 256 (366)
++.++||.| +|.+|...++.+...|+ .++.+.+++++.+..+++ +... .+..+ ++.......+.++... .++
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~ 83 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGA-IPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAK-FGR 83 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCC-cEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh-cCC
Confidence 367899998 68999988877777898 466666766655444433 3221 11111 1222233333333322 357
Q ss_pred CcEEEEcCCC
Q 017793 257 IDVSFDCVGF 266 (366)
Q Consensus 257 ~d~vld~~g~ 266 (366)
+|++|.+.|.
T Consensus 84 id~vi~~ag~ 93 (258)
T PRK08628 84 IDGLVNNAGV 93 (258)
T ss_pred CCEEEECCcc
Confidence 9999999883
No 299
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=95.03 E-value=0.79 Score=40.60 Aligned_cols=35 Identities=23% Similarity=0.393 Sum_probs=30.4
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCC
Q 017793 183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD 217 (366)
Q Consensus 183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~ 217 (366)
.+.+|+|.|+|++|..++..+-+.|..++..+|.+
T Consensus 29 ~~s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D 63 (268)
T PRK15116 29 ADAHICVVGIGGVGSWAAEALARTGIGAITLIDMD 63 (268)
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 35789999999999999999999998888888754
No 300
>PRK06953 short chain dehydrogenase; Provisional
Probab=95.03 E-value=0.18 Score=43.33 Aligned_cols=77 Identities=31% Similarity=0.368 Sum_probs=48.5
Q ss_pred CEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCce-eeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793 185 TNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE-TAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD 262 (366)
Q Consensus 185 ~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld 262 (366)
.++||.| +|.+|...++.+...|+ +++.+++++++.+.++..+... ..|. ++...+.+...++ .+.++|+++.
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~D~-~~~~~v~~~~~~~---~~~~~d~vi~ 76 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGW-RVIATARDAAALAALQALGAEALALDV-ADPASVAGLAWKL---DGEALDAAVY 76 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCC-EEEEEECCHHHHHHHHhccceEEEecC-CCHHHHHHHHHHh---cCCCCCEEEE
Confidence 3688998 69999988887777798 6777878877766666555432 1222 1222222222222 2347999999
Q ss_pred cCCC
Q 017793 263 CVGF 266 (366)
Q Consensus 263 ~~g~ 266 (366)
+.|.
T Consensus 77 ~ag~ 80 (222)
T PRK06953 77 VAGV 80 (222)
T ss_pred CCCc
Confidence 8775
No 301
>PRK07832 short chain dehydrogenase; Provisional
Probab=95.03 E-value=0.69 Score=41.04 Aligned_cols=78 Identities=27% Similarity=0.427 Sum_probs=47.3
Q ss_pred EEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCcee----eecCCCCcchHHHHHHHHHhhCCC
Q 017793 186 NVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADET----AKVSTDIEDVDTDVGKIQNAMGSG 256 (366)
Q Consensus 186 ~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 256 (366)
+++|.| +|++|...++.+...|+ .|+.+++++++.+.+ +..+.... .|. ++.........++.. ..++
T Consensus 2 ~vlItGas~giG~~la~~la~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~-~~~~ 78 (272)
T PRK07832 2 RCFVTGAASGIGRATALRLAAQGA-ELFLTDRDADGLAQTVADARALGGTVPEHRALDI-SDYDAVAAFAADIHA-AHGS 78 (272)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeC-CCHHHHHHHHHHHHH-hcCC
Confidence 689998 69999999988888898 577777776654322 22333221 232 122223333333322 2356
Q ss_pred CcEEEEcCCC
Q 017793 257 IDVSFDCVGF 266 (366)
Q Consensus 257 ~d~vld~~g~ 266 (366)
+|+++.+.|.
T Consensus 79 id~lv~~ag~ 88 (272)
T PRK07832 79 MDVVMNIAGI 88 (272)
T ss_pred CCEEEECCCC
Confidence 9999999974
No 302
>PRK08328 hypothetical protein; Provisional
Probab=95.00 E-value=0.31 Score=42.28 Aligned_cols=33 Identities=27% Similarity=0.431 Sum_probs=29.4
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcC
Q 017793 184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDV 216 (366)
Q Consensus 184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~ 216 (366)
+.+|+|.|+|++|..++..+...|+.++..+|.
T Consensus 27 ~~~VlIiG~GGlGs~ia~~La~~Gvg~i~lvD~ 59 (231)
T PRK08328 27 KAKVAVVGVGGLGSPVAYYLAAAGVGRILLIDE 59 (231)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcC
Confidence 478999999999999999999999988888864
No 303
>PRK08862 short chain dehydrogenase; Provisional
Probab=94.96 E-value=0.28 Score=42.44 Aligned_cols=81 Identities=16% Similarity=0.169 Sum_probs=49.9
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCceeeecC---CCCcchHHHHHHHHHhhC
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADETAKVS---TDIEDVDTDVGKIQNAMG 254 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~~~~~~---~~~~~~~~~~~~~~~~~~ 254 (366)
++.++||.| ++++|.+.+..+...|+ .|+.+.+++++.+.+ ++.+.+. ..+. .+.++..+.+.++.+..+
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~i~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~g 81 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGA-TLILCDQDQSALKDTYEQCSALTDNV-YSFQLKDFSQESIRHLFDAIEQQFN 81 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCCe-EEEEccCCCHHHHHHHHHHHHHHhC
Confidence 367899998 58999887777777899 677777777665432 2334332 1121 222333333444433333
Q ss_pred CCCcEEEEcCC
Q 017793 255 SGIDVSFDCVG 265 (366)
Q Consensus 255 ~~~d~vld~~g 265 (366)
..+|+++.+.|
T Consensus 82 ~~iD~li~nag 92 (227)
T PRK08862 82 RAPDVLVNNWT 92 (227)
T ss_pred CCCCEEEECCc
Confidence 37999999986
No 304
>PRK08589 short chain dehydrogenase; Validated
Probab=94.94 E-value=0.23 Score=44.23 Aligned_cols=81 Identities=21% Similarity=0.321 Sum_probs=49.1
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc---CCce-e--eecCCCCcchHHHHHHHHHhhCC
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL---GADE-T--AKVSTDIEDVDTDVGKIQNAMGS 255 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l---g~~~-~--~~~~~~~~~~~~~~~~~~~~~~~ 255 (366)
++.++||.| ++++|.+.++.+...|+ .|+.++++++..+.+.++ +... . .|. ++..+....+.++.+. -+
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl-~~~~~~~~~~~~~~~~-~g 81 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGA-YVLAVDIAEAVSETVDKIKSNGGKAKAYHVDI-SDEQQVKDFASEIKEQ-FG 81 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHhcCCeEEEEEeec-CCHHHHHHHHHHHHHH-cC
Confidence 467899998 68999998887777898 677777774333333333 3221 1 222 2223333444444332 24
Q ss_pred CCcEEEEcCCC
Q 017793 256 GIDVSFDCVGF 266 (366)
Q Consensus 256 ~~d~vld~~g~ 266 (366)
++|+++.+.|.
T Consensus 82 ~id~li~~Ag~ 92 (272)
T PRK08589 82 RVDVLFNNAGV 92 (272)
T ss_pred CcCEEEECCCC
Confidence 69999998864
No 305
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.
Probab=94.93 E-value=0.15 Score=49.43 Aligned_cols=77 Identities=21% Similarity=0.313 Sum_probs=52.4
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCCh---------------------hHHHHHHHcCCceeeecCCCCcc
Q 017793 183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV---------------------QRLSIARNLGADETAKVSTDIED 241 (366)
Q Consensus 183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~---------------------~~~~~~~~lg~~~~~~~~~~~~~ 241 (366)
.+.+|+|+|+|+.|+.+...++..|. .|+.++..+ ...++++++|.+...+..- ..+
T Consensus 140 ~~~~V~IIG~GpaGl~aA~~l~~~G~-~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v-~~~ 217 (467)
T TIGR01318 140 TGKRVAVIGAGPAGLACADILARAGV-QVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEV-GRD 217 (467)
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEe-CCc
Confidence 57899999999999999999999999 566665543 2456778888765433211 111
Q ss_pred hHHHHHHHHHhhCCCCcEEEEcCCCh
Q 017793 242 VDTDVGKIQNAMGSGIDVSFDCVGFD 267 (366)
Q Consensus 242 ~~~~~~~~~~~~~~~~d~vld~~g~~ 267 (366)
+ .+..+ ..++|.||.++|..
T Consensus 218 ~--~~~~~----~~~~D~vilAtGa~ 237 (467)
T TIGR01318 218 I--SLDDL----LEDYDAVFLGVGTY 237 (467)
T ss_pred c--CHHHH----HhcCCEEEEEeCCC
Confidence 1 11222 13699999999975
No 306
>TIGR01532 E4PD_g-proteo D-erythrose-4-phosphate dehydrogenase. Accordingly, this model is very close to the corresponding models for GAPDH, and those sequences which hit above trusted here invariably hit between trusted and noise to the GAPDH model (TIGR01534). Similarly, it may be found that there are species outside of the gamma proteobacteria which synthesize pyridoxine and have more than one aparrent GAPDH gene of which one may have E4PD activity - this may necessitate a readjustment of these models. Alternatively, some of the GAPDH enzymes may prove to be bifunctional in certain species.
Probab=94.92 E-value=0.27 Score=44.92 Aligned_cols=102 Identities=22% Similarity=0.251 Sum_probs=61.3
Q ss_pred EEEEECCCHHHHHHHHHHHHCC----CCeEEEEcC--ChhHHHHHHHcCCce------------eeecCCCCcchH--HH
Q 017793 186 NVMIMGSGPIGLVTLLAARAFG----APRIIITDV--DVQRLSIARNLGADE------------TAKVSTDIEDVD--TD 245 (366)
Q Consensus 186 ~vlI~G~g~vG~~ai~la~~~g----~~~vv~v~~--~~~~~~~~~~lg~~~------------~~~~~~~~~~~~--~~ 245 (366)
+|.|.|.|.+|....+.+...+ + .++.+.. +.+...++.++.... .+.++...-.+. ..
T Consensus 1 ~IaInGfGrIGR~vlr~l~e~~~~~~~-~vvaInd~~~~~~~ayll~yDS~hg~~~~~v~~~~~~l~v~g~~i~v~~~~~ 79 (325)
T TIGR01532 1 RVAINGFGRIGRNVLRALYESGERLGI-EVVALNELADQASMAHLLRYDTSHGRFPGEVKVDGDCLHVNGDCIRVLHSPT 79 (325)
T ss_pred CEEEECCCHHHHHHHHHHHhcCCCCCe-EEEEEecCCCHHHHHHHHhhCccCCCCCCcEEEeCCEEEECCeEEEEEEcCC
Confidence 4789999999999999887653 5 4555532 334445555543210 000100000000 01
Q ss_pred HHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEccc
Q 017793 246 VGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLA 289 (366)
Q Consensus 246 ~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~ 289 (366)
..++.+ ...++|+||+|.|...+...+..++..|++.+.++.+
T Consensus 80 p~~~~w-~~~gvDiVie~tG~~~s~e~a~~~l~aGa~~V~~SaP 122 (325)
T TIGR01532 80 PEALPW-RALGVDLVLDCTGVYGNREQGERHIRAGAKRVLFSHP 122 (325)
T ss_pred hhhccc-cccCCCEEEEccchhccHHHHHHHHHcCCeEEEecCC
Confidence 112211 2358999999999887788888899999888888754
No 307
>PRK07340 ornithine cyclodeaminase; Validated
Probab=94.92 E-value=0.37 Score=43.70 Aligned_cols=102 Identities=16% Similarity=0.185 Sum_probs=65.2
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHH-CCCCeEEEEcCChhHHH-HHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcE
Q 017793 182 GPETNVMIMGSGPIGLVTLLAARA-FGAPRIIITDVDVQRLS-IARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDV 259 (366)
Q Consensus 182 ~~~~~vlI~G~g~vG~~ai~la~~-~g~~~vv~v~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 259 (366)
+...+++|+|+|..|.+.++.+.. .+.+.+.+.++++++.+ ++.++....+ ... ..+..+.+ ..+|+
T Consensus 123 ~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~-~~~--~~~~~~av--------~~aDi 191 (304)
T PRK07340 123 APPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGP-TAE--PLDGEAIP--------EAVDL 191 (304)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCC-eeE--ECCHHHHh--------hcCCE
Confidence 456789999999999888777764 67778888888887755 4445532110 000 01222222 47999
Q ss_pred EEEcCCChHHHHHHHHhhcCCceEEEEcccCC-Cceee
Q 017793 260 SFDCVGFDKTMSTALNATRPGGKVCLIGLAKT-EMTVA 296 (366)
Q Consensus 260 vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~ 296 (366)
|+.|.+...-+-.. .+++|-++..+|...+ ..+++
T Consensus 192 VitaT~s~~Pl~~~--~~~~g~hi~~iGs~~p~~~El~ 227 (304)
T PRK07340 192 VVTATTSRTPVYPE--AARAGRLVVAVGAFTPDMAELA 227 (304)
T ss_pred EEEccCCCCceeCc--cCCCCCEEEecCCCCCCcccCC
Confidence 99988875432223 3788888989986543 33444
No 308
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=94.90 E-value=0.54 Score=39.79 Aligned_cols=34 Identities=26% Similarity=0.450 Sum_probs=30.0
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCC
Q 017793 184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD 217 (366)
Q Consensus 184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~ 217 (366)
..+|+|.|+|++|...++.+.+.|...+..+|.+
T Consensus 21 ~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 21 QATVAICGLGGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 4779999999999998888888999878888776
No 309
>PRK06483 dihydromonapterin reductase; Provisional
Probab=94.88 E-value=0.29 Score=42.37 Aligned_cols=80 Identities=16% Similarity=0.192 Sum_probs=48.9
Q ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhH-HHHHHHcCCcee-eecCCCCcchHHHHHHHHHhhCCCCcEE
Q 017793 184 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQR-LSIARNLGADET-AKVSTDIEDVDTDVGKIQNAMGSGIDVS 260 (366)
Q Consensus 184 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~-~~~~~~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~v 260 (366)
+.++||.| +|++|...++.+...|+ .|+.++++++. .+.+++.++..+ .|. ++..+....+.++... -+++|++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~-~~~id~l 78 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQ-PVIVSYRTHYPAIDGLRQAGAQCIQADF-STNAGIMAFIDELKQH-TDGLRAI 78 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCEEEEcCC-CCHHHHHHHHHHHHhh-CCCccEE
Confidence 35789998 68999998888888899 56666665543 334444553221 222 2223344444444321 2469999
Q ss_pred EEcCCC
Q 017793 261 FDCVGF 266 (366)
Q Consensus 261 ld~~g~ 266 (366)
+.+.|.
T Consensus 79 v~~ag~ 84 (236)
T PRK06483 79 IHNASD 84 (236)
T ss_pred EECCcc
Confidence 998874
No 310
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=94.88 E-value=0.4 Score=41.78 Aligned_cols=82 Identities=17% Similarity=0.194 Sum_probs=49.1
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChh--HHHHHHHcCCce-eeecC-CCCcchHHHHHHHHHhhCCCC
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQ--RLSIARNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGSGI 257 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~--~~~~~~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~ 257 (366)
.+.++||.| +|.+|...+..+...|+ .|+.+++++. ..+.+++++... .+..+ ++..++...+.++.+. .+++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~~ 81 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGA-DIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEE-FGHI 81 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH-cCCC
Confidence 468899998 58999998888888899 6777766542 223334444321 11111 2223333333433322 3469
Q ss_pred cEEEEcCCC
Q 017793 258 DVSFDCVGF 266 (366)
Q Consensus 258 d~vld~~g~ 266 (366)
|+++.+.|.
T Consensus 82 d~li~~ag~ 90 (248)
T TIGR01832 82 DILVNNAGI 90 (248)
T ss_pred CEEEECCCC
Confidence 999998874
No 311
>PRK13243 glyoxylate reductase; Reviewed
Probab=94.88 E-value=0.54 Score=43.28 Aligned_cols=90 Identities=21% Similarity=0.282 Sum_probs=60.3
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793 183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD 262 (366)
Q Consensus 183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld 262 (366)
.|.+|.|+|.|.+|...++.++..|. .|++.+++.+.. ...+++.. + .++. ++. ...|+|+-
T Consensus 149 ~gktvgIiG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~~-~~~~~~~~----~----~~l~----ell----~~aDiV~l 210 (333)
T PRK13243 149 YGKTIGIIGFGRIGQAVARRAKGFGM-RILYYSRTRKPE-AEKELGAE----Y----RPLE----ELL----RESDFVSL 210 (333)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCChh-hHHHcCCE----e----cCHH----HHH----hhCCEEEE
Confidence 46899999999999999999999999 688888765433 23344431 1 1222 222 34799988
Q ss_pred cCCChHH----H-HHHHHhhcCCceEEEEcccC
Q 017793 263 CVGFDKT----M-STALNATRPGGKVCLIGLAK 290 (366)
Q Consensus 263 ~~g~~~~----~-~~~~~~l~~~G~~v~~g~~~ 290 (366)
+++.... + ...+..|+++..++-++...
T Consensus 211 ~lP~t~~T~~~i~~~~~~~mk~ga~lIN~aRg~ 243 (333)
T PRK13243 211 HVPLTKETYHMINEERLKLMKPTAILVNTARGK 243 (333)
T ss_pred eCCCChHHhhccCHHHHhcCCCCeEEEECcCch
Confidence 8865321 1 24567788888887775433
No 312
>PRK07904 short chain dehydrogenase; Provisional
Probab=94.86 E-value=0.3 Score=42.99 Aligned_cols=83 Identities=18% Similarity=0.320 Sum_probs=48.5
Q ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHHCC-CCeEEEEcCChhH-HH-H---HHHcCCce--eeecC-CCCcchHHHHHHHH
Q 017793 181 VGPETNVMIMG-SGPIGLVTLLAARAFG-APRIIITDVDVQR-LS-I---ARNLGADE--TAKVS-TDIEDVDTDVGKIQ 250 (366)
Q Consensus 181 ~~~~~~vlI~G-~g~vG~~ai~la~~~g-~~~vv~v~~~~~~-~~-~---~~~lg~~~--~~~~~-~~~~~~~~~~~~~~ 250 (366)
+..+.++||.| +|++|...++-+...| + .|+.+.+++++ .+ . +++.+... .+..+ ++..+..+.++++.
T Consensus 5 ~~~~~~vlItGas~giG~~la~~l~~~gg~-~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~ 83 (253)
T PRK07904 5 VGNPQTILLLGGTSEIGLAICERYLKNAPA-RVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAF 83 (253)
T ss_pred cCCCcEEEEEcCCcHHHHHHHHHHHhcCCC-eEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHH
Confidence 55678999998 6899998887665564 7 66666676654 32 2 23334322 22221 22233333444443
Q ss_pred HhhCCCCcEEEEcCCC
Q 017793 251 NAMGSGIDVSFDCVGF 266 (366)
Q Consensus 251 ~~~~~~~d~vld~~g~ 266 (366)
+ .+++|+++.+.|.
T Consensus 84 ~--~g~id~li~~ag~ 97 (253)
T PRK07904 84 A--GGDVDVAIVAFGL 97 (253)
T ss_pred h--cCCCCEEEEeeec
Confidence 3 2579999987765
No 313
>PRK07825 short chain dehydrogenase; Provisional
Probab=94.85 E-value=0.27 Score=43.72 Aligned_cols=80 Identities=30% Similarity=0.312 Sum_probs=50.7
Q ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCCcee--eecCCCCcchHHHHHHHHHhhCCCCcE
Q 017793 184 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGADET--AKVSTDIEDVDTDVGKIQNAMGSGIDV 259 (366)
Q Consensus 184 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~d~ 259 (366)
+.++||.| +|++|...++.+...|+ .|+.+++++++.+.+ ++++.... .|. ++.+++...+.++... -+++|+
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~-~~~id~ 81 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAALGA-RVAIGDLDEALAKETAAELGLVVGGPLDV-TDPASFAAFLDAVEAD-LGPIDV 81 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEccC-CCHHHHHHHHHHHHHH-cCCCCE
Confidence 56899998 69999998887777899 577777777765533 44441122 222 2223343444444332 257999
Q ss_pred EEEcCCC
Q 017793 260 SFDCVGF 266 (366)
Q Consensus 260 vld~~g~ 266 (366)
++.+.|.
T Consensus 82 li~~ag~ 88 (273)
T PRK07825 82 LVNNAGV 88 (273)
T ss_pred EEECCCc
Confidence 9999874
No 314
>PRK05867 short chain dehydrogenase; Provisional
Probab=94.85 E-value=0.31 Score=42.71 Aligned_cols=81 Identities=22% Similarity=0.300 Sum_probs=50.3
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HH---cCCce-e--eecCCCCcchHHHHHHHHHhhC
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RN---LGADE-T--AKVSTDIEDVDTDVGKIQNAMG 254 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~---lg~~~-~--~~~~~~~~~~~~~~~~~~~~~~ 254 (366)
.+.++||.| +|++|...++.+...|+ +|+.+++++++.+.+ .+ .+... . .|. ++..+..+.+.++.+. -
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~-~ 84 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGA-QVAIAARHLDALEKLADEIGTSGGKVVPVCCDV-SQHQQVTSMLDQVTAE-L 84 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccC-CCHHHHHHHHHHHHHH-h
Confidence 367899998 58999998888888899 677777777665433 22 23221 1 222 2223333444443322 2
Q ss_pred CCCcEEEEcCCC
Q 017793 255 SGIDVSFDCVGF 266 (366)
Q Consensus 255 ~~~d~vld~~g~ 266 (366)
+++|+++.+.|.
T Consensus 85 g~id~lv~~ag~ 96 (253)
T PRK05867 85 GGIDIAVCNAGI 96 (253)
T ss_pred CCCCEEEECCCC
Confidence 479999998874
No 315
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=94.82 E-value=0.22 Score=39.20 Aligned_cols=92 Identities=18% Similarity=0.334 Sum_probs=54.2
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCCh-------------------hHHH----HHHHcCCc-eeeecCCCC
Q 017793 184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV-------------------QRLS----IARNLGAD-ETAKVSTDI 239 (366)
Q Consensus 184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~-------------------~~~~----~~~~lg~~-~~~~~~~~~ 239 (366)
..+|+|.|+|++|...+..+-..|+..+..+|.+. .|.+ .++++... .+..+..
T Consensus 2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~-- 79 (135)
T PF00899_consen 2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPE-- 79 (135)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEES--
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeec--
Confidence 46899999999999888888888998888886322 1222 22333322 2222211
Q ss_pred cch-HHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCce
Q 017793 240 EDV-DTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGK 282 (366)
Q Consensus 240 ~~~-~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~ 282 (366)
++ .....++. .++|+|++|.........+.+.+...+.
T Consensus 80 -~~~~~~~~~~~----~~~d~vi~~~d~~~~~~~l~~~~~~~~~ 118 (135)
T PF00899_consen 80 -KIDEENIEELL----KDYDIVIDCVDSLAARLLLNEICREYGI 118 (135)
T ss_dssp -HCSHHHHHHHH----HTSSEEEEESSSHHHHHHHHHHHHHTT-
T ss_pred -ccccccccccc----cCCCEEEEecCCHHHHHHHHHHHHHcCC
Confidence 22 12222222 4789999999986555555555555554
No 316
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=94.80 E-value=0.41 Score=37.04 Aligned_cols=94 Identities=19% Similarity=0.165 Sum_probs=49.2
Q ss_pred EEEEECC-CHHHHHHHHHHHH-CCCCeEEEEcCChh---HHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEE
Q 017793 186 NVMIMGS-GPIGLVTLLAARA-FGAPRIIITDVDVQ---RLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS 260 (366)
Q Consensus 186 ~vlI~G~-g~vG~~ai~la~~-~g~~~vv~v~~~~~---~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v 260 (366)
+|+|+|+ |-+|...++.+.. .+.+.+.+++++++ ..+.-.-.+.... .-.....+.++. ..+|++
T Consensus 2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~------~~~v~~~l~~~~----~~~DVv 71 (124)
T PF01113_consen 2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPL------GVPVTDDLEELL----EEADVV 71 (124)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-------SSBEBS-HHHHT----TH-SEE
T ss_pred EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCc------ccccchhHHHhc----ccCCEE
Confidence 6899996 9999999999997 67755666666551 1111111111100 000111222222 238888
Q ss_pred EEcCCChHHHHHHHHhhcCCceEEEEcccC
Q 017793 261 FDCVGFDKTMSTALNATRPGGKVCLIGLAK 290 (366)
Q Consensus 261 ld~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 290 (366)
||+.. ++.....++.+...|.-+.+|.++
T Consensus 72 IDfT~-p~~~~~~~~~~~~~g~~~ViGTTG 100 (124)
T PF01113_consen 72 IDFTN-PDAVYDNLEYALKHGVPLVIGTTG 100 (124)
T ss_dssp EEES--HHHHHHHHHHHHHHT-EEEEE-SS
T ss_pred EEcCC-hHHhHHHHHHHHhCCCCEEEECCC
Confidence 88885 445555555555556656665544
No 317
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=94.79 E-value=0.24 Score=46.43 Aligned_cols=72 Identities=19% Similarity=0.369 Sum_probs=53.9
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHH-HHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEE
Q 017793 183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF 261 (366)
Q Consensus 183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl 261 (366)
.+.++||+|+|-+|..++..+...|+..+.++.++.+|.+ +++++|+..+ .++ + +... -..+|+||
T Consensus 177 ~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~-~l~----e----l~~~----l~~~DvVi 243 (414)
T COG0373 177 KDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAV-ALE----E----LLEA----LAEADVVI 243 (414)
T ss_pred ccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeee-cHH----H----HHHh----hhhCCEEE
Confidence 6789999999999999999999999878888878777754 7788995432 221 1 1111 24699999
Q ss_pred EcCCCh
Q 017793 262 DCVGFD 267 (366)
Q Consensus 262 d~~g~~ 267 (366)
-+.+.+
T Consensus 244 ssTsa~ 249 (414)
T COG0373 244 SSTSAP 249 (414)
T ss_pred EecCCC
Confidence 998876
No 318
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=94.78 E-value=0.46 Score=41.16 Aligned_cols=34 Identities=24% Similarity=0.394 Sum_probs=29.7
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCC
Q 017793 184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD 217 (366)
Q Consensus 184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~ 217 (366)
..+|+|.|+|++|..++..+-+.|+..+..+|.+
T Consensus 11 ~~~VlVvG~GGvGs~va~~Lar~GVg~i~LvD~D 44 (231)
T cd00755 11 NAHVAVVGLGGVGSWAAEALARSGVGKLTLIDFD 44 (231)
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 4679999999999999999888999888888754
No 319
>PRK06128 oxidoreductase; Provisional
Probab=94.77 E-value=0.92 Score=41.00 Aligned_cols=103 Identities=18% Similarity=0.234 Sum_probs=58.5
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChh--H----HHHHHHcCCcee---eecCCCCcchHHHHHHHHHh
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQ--R----LSIARNLGADET---AKVSTDIEDVDTDVGKIQNA 252 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~--~----~~~~~~lg~~~~---~~~~~~~~~~~~~~~~~~~~ 252 (366)
.+.++||.| +|++|...+..+...|+ .|+.+..+.+ + .+.+++.+.... .|. ++.....+.+.++.+.
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-~~~~~v~~~~~~~~~~ 131 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGA-DIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDL-KDEAFCRQLVERAVKE 131 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCC-CCHHHHHHHHHHHHHH
Confidence 367899998 69999998888888899 4555544322 1 223333443221 121 1222333333333322
Q ss_pred hCCCCcEEEEcCCCh--------------------------HHHHHHHHhhcCCceEEEEcc
Q 017793 253 MGSGIDVSFDCVGFD--------------------------KTMSTALNATRPGGKVCLIGL 288 (366)
Q Consensus 253 ~~~~~d~vld~~g~~--------------------------~~~~~~~~~l~~~G~~v~~g~ 288 (366)
-+++|+++.+.|.. ...+.+...+.++|+++.++.
T Consensus 132 -~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS 192 (300)
T PRK06128 132 -LGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGS 192 (300)
T ss_pred -hCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECC
Confidence 34799999998741 022334445567789888764
No 320
>PRK07024 short chain dehydrogenase; Provisional
Probab=94.75 E-value=0.28 Score=43.13 Aligned_cols=81 Identities=19% Similarity=0.163 Sum_probs=48.7
Q ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCCc-eeeecC---CCCcchHHHHHHHHHhhCCCC
Q 017793 184 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGAD-ETAKVS---TDIEDVDTDVGKIQNAMGSGI 257 (366)
Q Consensus 184 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 257 (366)
+.++||.| +|++|...++.+...|+ .|+.++++.++.+.+ +++... .+..+. ++.+++.+.+.++... .+.+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~-~g~i 79 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGA-TLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAA-HGLP 79 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHh-CCCC
Confidence 35899998 69999998888888899 677787877765543 333211 111111 2222333333333322 2458
Q ss_pred cEEEEcCCC
Q 017793 258 DVSFDCVGF 266 (366)
Q Consensus 258 d~vld~~g~ 266 (366)
|+++.+.|.
T Consensus 80 d~lv~~ag~ 88 (257)
T PRK07024 80 DVVIANAGI 88 (257)
T ss_pred CEEEECCCc
Confidence 999998873
No 321
>PTZ00146 fibrillarin; Provisional
Probab=94.74 E-value=0.45 Score=42.55 Aligned_cols=106 Identities=12% Similarity=0.151 Sum_probs=63.9
Q ss_pred HHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-CeEEEEcCChhHHH-HHHHcCC-ceeeecCCCCcchHHHHHHHH
Q 017793 174 HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLS-IARNLGA-DETAKVSTDIEDVDTDVGKIQ 250 (366)
Q Consensus 174 ~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~-~~vv~v~~~~~~~~-~~~~lg~-~~~~~~~~~~~~~~~~~~~~~ 250 (366)
..+....++++++||=+|||+ |..+..+++..|- ..|++++.+++-.+ +++.... +.+..+..+... ......+
T Consensus 123 ~g~~~l~IkpG~~VLDLGaG~-G~~t~~lAdiVG~~G~VyAVD~s~r~~~dLl~~ak~r~NI~~I~~Da~~-p~~y~~~- 199 (293)
T PTZ00146 123 GGVANIPIKPGSKVLYLGAAS-GTTVSHVSDLVGPEGVVYAVEFSHRSGRDLTNMAKKRPNIVPIIEDARY-PQKYRML- 199 (293)
T ss_pred CCcceeccCCCCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcCCCEEEECCccC-hhhhhcc-
Confidence 445667799999999999876 7788899998863 37999998865332 2221110 111111121111 1111111
Q ss_pred HhhCCCCcEEEEcCCChH----HHHHHHHhhcCCceEEE
Q 017793 251 NAMGSGIDVSFDCVGFDK----TMSTALNATRPGGKVCL 285 (366)
Q Consensus 251 ~~~~~~~d~vld~~g~~~----~~~~~~~~l~~~G~~v~ 285 (366)
...+|+||-.+..+. ....+...|+++|.+++
T Consensus 200 ---~~~vDvV~~Dva~pdq~~il~~na~r~LKpGG~~vI 235 (293)
T PTZ00146 200 ---VPMVDVIFADVAQPDQARIVALNAQYFLKNGGHFII 235 (293)
T ss_pred ---cCCCCEEEEeCCCcchHHHHHHHHHHhccCCCEEEE
Confidence 236999988765443 23356678999999887
No 322
>PRK06198 short chain dehydrogenase; Provisional
Probab=94.74 E-value=0.37 Score=42.34 Aligned_cols=82 Identities=21% Similarity=0.298 Sum_probs=50.3
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHH----HHHHcCCcee---eecCCCCcchHHHHHHHHHhhC
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS----IARNLGADET---AKVSTDIEDVDTDVGKIQNAMG 254 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~----~~~~lg~~~~---~~~~~~~~~~~~~~~~~~~~~~ 254 (366)
.+.+++|.| +|.+|...++.+...|++.|+.++++.++.. .+++.+.... .|. .+...+.+.+..+... -
T Consensus 5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~-~ 82 (260)
T PRK06198 5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADL-SDVEDCRRVVAAADEA-F 82 (260)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccC-CCHHHHHHHHHHHHHH-h
Confidence 467899998 6899999998888889954888877765543 2233443321 122 1222233333333222 2
Q ss_pred CCCcEEEEcCCC
Q 017793 255 SGIDVSFDCVGF 266 (366)
Q Consensus 255 ~~~d~vld~~g~ 266 (366)
+++|++|.+.|.
T Consensus 83 g~id~li~~ag~ 94 (260)
T PRK06198 83 GRLDALVNAAGL 94 (260)
T ss_pred CCCCEEEECCCc
Confidence 469999999874
No 323
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=94.73 E-value=0.16 Score=45.24 Aligned_cols=77 Identities=18% Similarity=0.154 Sum_probs=52.7
Q ss_pred HHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcCCceeeecCCCCcchHHHHHHHHH
Q 017793 173 VHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-NLGADETAKVSTDIEDVDTDVGKIQN 251 (366)
Q Consensus 173 ~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~lg~~~~~~~~~~~~~~~~~~~~~~~ 251 (366)
+.+++......+.+++|+|+|+.+.+++.-++..|+.++.++.++.++.+.+. .++.+ + ... +
T Consensus 111 ~~~L~~~~~~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~----~-------~~~---~-- 174 (272)
T PRK12550 111 AKLLASYQVPPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYE----W-------RPD---L-- 174 (272)
T ss_pred HHHHHhcCCCCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCc----c-------hhh---c--
Confidence 34454444455678999999999999999888899988888888888776543 34311 1 000 1
Q ss_pred hhCCCCcEEEEcCCC
Q 017793 252 AMGSGIDVSFDCVGF 266 (366)
Q Consensus 252 ~~~~~~d~vld~~g~ 266 (366)
....+|+|++|.+.
T Consensus 175 -~~~~~dlvINaTp~ 188 (272)
T PRK12550 175 -GGIEADILVNVTPI 188 (272)
T ss_pred -ccccCCEEEECCcc
Confidence 02358999999863
No 324
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=94.70 E-value=0.24 Score=44.09 Aligned_cols=83 Identities=24% Similarity=0.271 Sum_probs=51.8
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCc--ee----eecCCCCcchHHHHHHHHH
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR----NLGAD--ET----AKVSTDIEDVDTDVGKIQN 251 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~----~lg~~--~~----~~~~~~~~~~~~~~~~~~~ 251 (366)
.|..+||.| +.++|.+.+..+...|+ +|+.+.+++++.+... ..+.. .+ .|. +..++..+.+....+
T Consensus 7 ~gkvalVTG~s~GIG~aia~~la~~Ga-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-~~~~~~~~l~~~~~~ 84 (270)
T KOG0725|consen 7 AGKVALVTGGSSGIGKAIALLLAKAGA-KVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDV-SKEVDVEKLVEFAVE 84 (270)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcC-CCHHHHHHHHHHHHH
Confidence 467888898 68999998888888999 6777778777654332 22222 11 222 222333333333333
Q ss_pred hhCCCCcEEEEcCCCh
Q 017793 252 AMGSGIDVSFDCVGFD 267 (366)
Q Consensus 252 ~~~~~~d~vld~~g~~ 267 (366)
...+++|+.+++.|..
T Consensus 85 ~~~GkidiLvnnag~~ 100 (270)
T KOG0725|consen 85 KFFGKIDILVNNAGAL 100 (270)
T ss_pred HhCCCCCEEEEcCCcC
Confidence 3357899999988754
No 325
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=94.69 E-value=0.45 Score=41.71 Aligned_cols=33 Identities=21% Similarity=0.375 Sum_probs=29.3
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcC
Q 017793 184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDV 216 (366)
Q Consensus 184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~ 216 (366)
..+|+|.|+|++|..++..+.+.|+.++..+|.
T Consensus 32 ~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~ 64 (245)
T PRK05690 32 AARVLVVGLGGLGCAASQYLAAAGVGTLTLVDF 64 (245)
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcC
Confidence 578999999999999999999999988888864
No 326
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=94.68 E-value=0.6 Score=42.52 Aligned_cols=90 Identities=13% Similarity=0.147 Sum_probs=59.1
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793 183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD 262 (366)
Q Consensus 183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld 262 (366)
.|.+|.|+|.|.+|....+.++..|+ +|++.+++.++.. +..... . ..+ +.++. ...|+|+.
T Consensus 135 ~g~tvgIvG~G~IG~~vA~~l~afG~-~V~~~~~~~~~~~-----~~~~~~---~-~~~----l~e~l----~~aDvvv~ 196 (312)
T PRK15469 135 EDFTIGILGAGVLGSKVAQSLQTWGF-PLRCWSRSRKSWP-----GVQSFA---G-REE----LSAFL----SQTRVLIN 196 (312)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCCCCCC-----Cceeec---c-ccc----HHHHH----hcCCEEEE
Confidence 57899999999999999999999999 6888876543321 111111 0 012 22332 35899988
Q ss_pred cCCChHHH-----HHHHHhhcCCceEEEEcccC
Q 017793 263 CVGFDKTM-----STALNATRPGGKVCLIGLAK 290 (366)
Q Consensus 263 ~~g~~~~~-----~~~~~~l~~~G~~v~~g~~~ 290 (366)
+.+..... ...++.|+++..++-++...
T Consensus 197 ~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~ 229 (312)
T PRK15469 197 LLPNTPETVGIINQQLLEQLPDGAYLLNLARGV 229 (312)
T ss_pred CCCCCHHHHHHhHHHHHhcCCCCcEEEECCCcc
Confidence 88753321 23567889998887776443
No 327
>PRK00216 ubiE ubiquinone/menaquinone biosynthesis methyltransferase; Reviewed
Probab=94.68 E-value=0.62 Score=40.30 Aligned_cols=104 Identities=19% Similarity=0.341 Sum_probs=66.1
Q ss_pred HhCCCCCCCEEEEECCCHHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHHHcCCc----eeeecCCCCcchHHHHHHHHH
Q 017793 177 RRANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARNLGAD----ETAKVSTDIEDVDTDVGKIQN 251 (366)
Q Consensus 177 ~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~lg~~----~~~~~~~~~~~~~~~~~~~~~ 251 (366)
.....+++.+||-+|+|. |..+..+++..+ ...+++++.+++..+.+++.-.. ..+.+.. .++... .
T Consensus 45 ~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~--~d~~~~----~- 116 (239)
T PRK00216 45 KWLGVRPGDKVLDLACGT-GDLAIALAKAVGKTGEVVGLDFSEGMLAVGREKLRDLGLSGNVEFVQ--GDAEAL----P- 116 (239)
T ss_pred HHhCCCCCCeEEEeCCCC-CHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHhhcccccccCeEEEe--cccccC----C-
Confidence 444566788999999887 888888888775 23899999999887777664211 1111111 111110 0
Q ss_pred hhCCCCcEEEEcCC------ChHHHHHHHHhhcCCceEEEEcc
Q 017793 252 AMGSGIDVSFDCVG------FDKTMSTALNATRPGGKVCLIGL 288 (366)
Q Consensus 252 ~~~~~~d~vld~~g------~~~~~~~~~~~l~~~G~~v~~g~ 288 (366)
.....+|+|+.... ....+..+.++|+++|.++.+..
T Consensus 117 ~~~~~~D~I~~~~~l~~~~~~~~~l~~~~~~L~~gG~li~~~~ 159 (239)
T PRK00216 117 FPDNSFDAVTIAFGLRNVPDIDKALREMYRVLKPGGRLVILEF 159 (239)
T ss_pred CCCCCccEEEEecccccCCCHHHHHHHHHHhccCCcEEEEEEe
Confidence 11346898874321 13466778889999999987654
No 328
>PRK11188 rrmJ 23S rRNA methyltransferase J; Provisional
Probab=94.67 E-value=0.61 Score=39.79 Aligned_cols=100 Identities=18% Similarity=0.257 Sum_probs=58.5
Q ss_pred hCC-CCCCCEEEEECCCHHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHH-hhC
Q 017793 178 RAN-VGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN-AMG 254 (366)
Q Consensus 178 ~~~-~~~~~~vlI~G~g~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~-~~~ 254 (366)
+.+ ++++++||=+|||+ |..+..+++..+. ..|++++.++.. .+ ..+..+..+..+.. .+.++.. ...
T Consensus 45 ~~~~~~~~~~VLDlG~Gt-G~~t~~l~~~~~~~~~V~aVDi~~~~-----~~--~~v~~i~~D~~~~~-~~~~i~~~~~~ 115 (209)
T PRK11188 45 SDKLFKPGMTVVDLGAAP-GGWSQYAVTQIGDKGRVIACDILPMD-----PI--VGVDFLQGDFRDEL-VLKALLERVGD 115 (209)
T ss_pred HhccCCCCCEEEEEcccC-CHHHHHHHHHcCCCceEEEEeccccc-----CC--CCcEEEecCCCChH-HHHHHHHHhCC
Confidence 344 68899988899776 6677777777653 379999987621 11 11111112212211 1112211 125
Q ss_pred CCCcEEEEcC-----CC------------hHHHHHHHHhhcCCceEEEE
Q 017793 255 SGIDVSFDCV-----GF------------DKTMSTALNATRPGGKVCLI 286 (366)
Q Consensus 255 ~~~d~vld~~-----g~------------~~~~~~~~~~l~~~G~~v~~ 286 (366)
..+|+|+... |. ...+..+.+.|++||.++..
T Consensus 116 ~~~D~V~S~~~~~~~g~~~~d~~~~~~~~~~~L~~~~~~LkpGG~~vi~ 164 (209)
T PRK11188 116 SKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALDMCRDVLAPGGSFVVK 164 (209)
T ss_pred CCCCEEecCCCCccCCChHHHHHHHHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 6799998644 21 12467788899999998874
No 329
>PRK06500 short chain dehydrogenase; Provisional
Probab=94.66 E-value=0.42 Score=41.64 Aligned_cols=82 Identities=24% Similarity=0.284 Sum_probs=50.8
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHH-HHHHcCCcee-eecC-CCCcchHHHHHHHHHhhCCCCc
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADET-AKVS-TDIEDVDTDVGKIQNAMGSGID 258 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~d 258 (366)
++.++||.| +|.+|...++.+...|+ .|+.+++++++.+ ..++++.... +..+ .+..+.......+.+ ..+++|
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~id 82 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGA-RVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAE-AFGRLD 82 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHH-HhCCCC
Confidence 467899998 69999999998888999 6788877766544 3345554321 1111 111222222333322 235799
Q ss_pred EEEEcCCC
Q 017793 259 VSFDCVGF 266 (366)
Q Consensus 259 ~vld~~g~ 266 (366)
+++.+.|.
T Consensus 83 ~vi~~ag~ 90 (249)
T PRK06500 83 AVFINAGV 90 (249)
T ss_pred EEEECCCC
Confidence 99998874
No 330
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.66 E-value=0.32 Score=42.42 Aligned_cols=82 Identities=20% Similarity=0.231 Sum_probs=49.9
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcC--Cce-eeecC-CCCcchHHHHHHHHHhhCCC
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLG--ADE-TAKVS-TDIEDVDTDVGKIQNAMGSG 256 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg--~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~ 256 (366)
++.++||.| +|.+|...++.+...|. .|+.+++++++.+.+ ..+. ... .+..+ .+..++...+.+.... ...
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~ 81 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGA-RVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALER-FGS 81 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-hCC
Confidence 356899998 69999988888888898 588888887665433 3332 111 11111 2223333333333222 346
Q ss_pred CcEEEEcCCC
Q 017793 257 IDVSFDCVGF 266 (366)
Q Consensus 257 ~d~vld~~g~ 266 (366)
+|++|.+.|.
T Consensus 82 ~d~vi~~ag~ 91 (251)
T PRK07231 82 VDILVNNAGT 91 (251)
T ss_pred CCEEEECCCC
Confidence 9999999875
No 331
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=94.65 E-value=0.71 Score=42.99 Aligned_cols=83 Identities=16% Similarity=0.099 Sum_probs=46.9
Q ss_pred CCCCEEEEEC-CCHHHHH--HHHHHHHCCCCeEEEEcCCh---h-------------HHHHHHHcCCce-eeecC-CCCc
Q 017793 182 GPETNVMIMG-SGPIGLV--TLLAARAFGAPRIIITDVDV---Q-------------RLSIARNLGADE-TAKVS-TDIE 240 (366)
Q Consensus 182 ~~~~~vlI~G-~g~vG~~--ai~la~~~g~~~vv~v~~~~---~-------------~~~~~~~lg~~~-~~~~~-~~~~ 240 (366)
..+.++||.| ++++|++ ..+.+ ..|+ .++++.... + -.+.++++|... .+..+ .+.+
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA-~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E 116 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAGA-DTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDE 116 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcCC-eEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHH
Confidence 3457889998 6899998 34444 7899 455554221 1 123445566532 22221 2223
Q ss_pred chHHHHHHHHHhhCCCCcEEEEcCCCh
Q 017793 241 DVDTDVGKIQNAMGSGIDVSFDCVGFD 267 (366)
Q Consensus 241 ~~~~~~~~~~~~~~~~~d~vld~~g~~ 267 (366)
...+.+.++.+. -+++|+++.+++.+
T Consensus 117 ~v~~lie~I~e~-~G~IDiLVnSaA~~ 142 (398)
T PRK13656 117 IKQKVIELIKQD-LGQVDLVVYSLASP 142 (398)
T ss_pred HHHHHHHHHHHh-cCCCCEEEECCccC
Confidence 344444444432 35799999998866
No 332
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.65 E-value=0.3 Score=42.70 Aligned_cols=81 Identities=23% Similarity=0.259 Sum_probs=46.8
Q ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHH-HHHHcCCce-e--eecCCCCcchHHHHHHHHHhhCCCCc
Q 017793 184 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADE-T--AKVSTDIEDVDTDVGKIQNAMGSGID 258 (366)
Q Consensus 184 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~d 258 (366)
+.++||.| +|.+|...+..+...|++.++...+++++.+ ...+++... . .|. .+..++.+.+.++....+.++|
T Consensus 5 ~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~~g~~id 83 (253)
T PRK08642 5 EQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADV-TDREQVQAMFATATEHFGKPIT 83 (253)
T ss_pred CCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCC-CCHHHHHHHHHHHHHHhCCCCe
Confidence 46899998 6999999888888889843333444444443 333344221 1 122 1223334444444333344599
Q ss_pred EEEEcCC
Q 017793 259 VSFDCVG 265 (366)
Q Consensus 259 ~vld~~g 265 (366)
+++.+.|
T Consensus 84 ~li~~ag 90 (253)
T PRK08642 84 TVVNNAL 90 (253)
T ss_pred EEEECCC
Confidence 9999876
No 333
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=94.64 E-value=1.2 Score=32.45 Aligned_cols=85 Identities=21% Similarity=0.287 Sum_probs=51.6
Q ss_pred EEEEECCCHHHHHHHHHHHHCC---CCeEE-EEcCChhHHHHH-HHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEE
Q 017793 186 NVMIMGSGPIGLVTLLAARAFG---APRII-ITDVDVQRLSIA-RNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS 260 (366)
Q Consensus 186 ~vlI~G~g~vG~~ai~la~~~g---~~~vv-~v~~~~~~~~~~-~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v 260 (366)
+|.|+|+|.+|.+.+.-+...| . .+. +.++++++.+.+ ++++..... .+..+.+ ...|+|
T Consensus 1 kI~iIG~G~mg~al~~~l~~~g~~~~-~v~~~~~r~~~~~~~~~~~~~~~~~~------~~~~~~~--------~~advv 65 (96)
T PF03807_consen 1 KIGIIGAGNMGSALARGLLASGIKPH-EVIIVSSRSPEKAAELAKEYGVQATA------DDNEEAA--------QEADVV 65 (96)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTS-GG-EEEEEEESSHHHHHHHHHHCTTEEES------EEHHHHH--------HHTSEE
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCce-eEEeeccCcHHHHHHHHHhhcccccc------CChHHhh--------ccCCEE
Confidence 5778899999999888888888 5 455 548888877655 566643321 0122222 248999
Q ss_pred EEcCCChHHHHHHHHh---hcCCceEEEE
Q 017793 261 FDCVGFDKTMSTALNA---TRPGGKVCLI 286 (366)
Q Consensus 261 ld~~g~~~~~~~~~~~---l~~~G~~v~~ 286 (366)
|-|+... .+...++. +.++..++.+
T Consensus 66 ilav~p~-~~~~v~~~i~~~~~~~~vis~ 93 (96)
T PF03807_consen 66 ILAVKPQ-QLPEVLSEIPHLLKGKLVISI 93 (96)
T ss_dssp EE-S-GG-GHHHHHHHHHHHHTTSEEEEE
T ss_pred EEEECHH-HHHHHHHHHhhccCCCEEEEe
Confidence 9999865 33333333 4555555543
No 334
>PRK06172 short chain dehydrogenase; Provisional
Probab=94.62 E-value=0.31 Score=42.64 Aligned_cols=82 Identities=23% Similarity=0.302 Sum_probs=49.1
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHH----HHHcCCce-eeecC-CCCcchHHHHHHHHHhhCC
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI----ARNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGS 255 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~----~~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~ 255 (366)
++.++||.| +|.+|...++.+...|+ .|+.+++++++.+. +++.+... .+..+ ++..+....+.+.... -+
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~-~g 83 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGA-KVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAA-YG 83 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH-hC
Confidence 467899998 68999998887777898 67778777765432 23334321 11111 1122333333333322 24
Q ss_pred CCcEEEEcCCC
Q 017793 256 GIDVSFDCVGF 266 (366)
Q Consensus 256 ~~d~vld~~g~ 266 (366)
++|+++.+.|.
T Consensus 84 ~id~li~~ag~ 94 (253)
T PRK06172 84 RLDYAFNNAGI 94 (253)
T ss_pred CCCEEEECCCC
Confidence 68999998874
No 335
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=94.61 E-value=0.63 Score=40.30 Aligned_cols=33 Identities=21% Similarity=0.348 Sum_probs=29.0
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcC
Q 017793 184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDV 216 (366)
Q Consensus 184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~ 216 (366)
..+|+|.|+|++|...+..+.+.|...+..+|.
T Consensus 21 ~~~VlivG~GglGs~va~~La~~Gvg~i~lvD~ 53 (228)
T cd00757 21 NARVLVVGAGGLGSPAAEYLAAAGVGKLGLVDD 53 (228)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcC
Confidence 478999999999999999999999988888853
No 336
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=94.61 E-value=0.19 Score=50.64 Aligned_cols=77 Identities=23% Similarity=0.288 Sum_probs=53.2
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChh---------------------HHHHHHHcCCceeeecCCCCcc
Q 017793 183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQ---------------------RLSIARNLGADETAKVSTDIED 241 (366)
Q Consensus 183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~---------------------~~~~~~~lg~~~~~~~~~~~~~ 241 (366)
.+.+|+|+|+|+.|+.++..++..|. .|++++..+. +.++++++|.+...+..- ..+
T Consensus 309 ~~kkVaIIG~GpaGl~aA~~L~~~G~-~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v-~~~ 386 (639)
T PRK12809 309 RSEKVAVIGAGPAGLGCADILARAGV-QVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEI-GRD 386 (639)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCC-cEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCcc-CCc
Confidence 48999999999999999999999999 5777765542 456778888765443211 111
Q ss_pred hHHHHHHHHHhhCCCCcEEEEcCCCh
Q 017793 242 VDTDVGKIQNAMGSGIDVSFDCVGFD 267 (366)
Q Consensus 242 ~~~~~~~~~~~~~~~~d~vld~~g~~ 267 (366)
+ .+.++ ..++|.||.++|..
T Consensus 387 ~--~~~~l----~~~~DaV~latGa~ 406 (639)
T PRK12809 387 I--TFSDL----TSEYDAVFIGVGTY 406 (639)
T ss_pred C--CHHHH----HhcCCEEEEeCCCC
Confidence 1 12222 24699999999864
No 337
>PRK07062 short chain dehydrogenase; Provisional
Probab=94.58 E-value=0.37 Score=42.54 Aligned_cols=82 Identities=24% Similarity=0.278 Sum_probs=49.7
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-Hc----CCceeeecC---CCCcchHHHHHHHHHhh
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-NL----GADETAKVS---TDIEDVDTDVGKIQNAM 253 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~l----g~~~~~~~~---~~~~~~~~~~~~~~~~~ 253 (366)
.+.++||.| ++++|.+.++.+...|+ .|+.+++++++.+.+. ++ +...+..+. .+..+..+.+.++.+.
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~- 84 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGA-SVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEAR- 84 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHh-
Confidence 367899998 68999998888888899 5777777776554322 21 111221111 2222333333333322
Q ss_pred CCCCcEEEEcCCC
Q 017793 254 GSGIDVSFDCVGF 266 (366)
Q Consensus 254 ~~~~d~vld~~g~ 266 (366)
-+.+|+++.+.|.
T Consensus 85 ~g~id~li~~Ag~ 97 (265)
T PRK07062 85 FGGVDMLVNNAGQ 97 (265)
T ss_pred cCCCCEEEECCCC
Confidence 3569999999874
No 338
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=94.57 E-value=0.58 Score=39.33 Aligned_cols=76 Identities=25% Similarity=0.389 Sum_probs=46.6
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-Hc----CCceeeecCCCCcchHHHHHHHHHhhCCC
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-NL----GADETAKVSTDIEDVDTDVGKIQNAMGSG 256 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~l----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (366)
++.+++|.| +|.+|...+..+...|. .++.+.++.++.+.+. .+ +.. +..... .+.. .+.+. -.+
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~-~V~l~~R~~~~~~~l~~~l~~~~~~~-~~~~~~--~~~~-~~~~~----~~~ 97 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREGA-RVVLVGRDLERAQKAADSLRARFGEG-VGAVET--SDDA-ARAAA----IKG 97 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhhcCCc-EEEeeC--CCHH-HHHHH----Hhc
Confidence 567899998 59999888887777887 6777777777655432 23 222 111111 1111 12222 146
Q ss_pred CcEEEEcCCCh
Q 017793 257 IDVSFDCVGFD 267 (366)
Q Consensus 257 ~d~vld~~g~~ 267 (366)
+|+||.+.+.+
T Consensus 98 ~diVi~at~~g 108 (194)
T cd01078 98 ADVVFAAGAAG 108 (194)
T ss_pred CCEEEECCCCC
Confidence 89999988765
No 339
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=94.57 E-value=1 Score=41.19 Aligned_cols=90 Identities=20% Similarity=0.288 Sum_probs=59.5
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793 183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD 262 (366)
Q Consensus 183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld 262 (366)
.|.++.|+|.|.+|++..+.++..|. +|+.-+++.. .+..+++++..+ + +.++. ...|++.-
T Consensus 145 ~gktvGIiG~GrIG~avA~r~~~Fgm-~v~y~~~~~~-~~~~~~~~~~y~--------~----l~ell----~~sDii~l 206 (324)
T COG1052 145 RGKTLGIIGLGRIGQAVARRLKGFGM-KVLYYDRSPN-PEAEKELGARYV--------D----LDELL----AESDIISL 206 (324)
T ss_pred CCCEEEEECCCHHHHHHHHHHhcCCC-EEEEECCCCC-hHHHhhcCceec--------c----HHHHH----HhCCEEEE
Confidence 38899999999999999999998888 7888877765 444444444321 1 22232 24677744
Q ss_pred -cCCChHHHH----HHHHhhcCCceEEEEcccC
Q 017793 263 -CVGFDKTMS----TALNATRPGGKVCLIGLAK 290 (366)
Q Consensus 263 -~~g~~~~~~----~~~~~l~~~G~~v~~g~~~ 290 (366)
|-.++++.. ..+..|++++.++-++...
T Consensus 207 ~~Plt~~T~hLin~~~l~~mk~ga~lVNtaRG~ 239 (324)
T COG1052 207 HCPLTPETRHLINAEELAKMKPGAILVNTARGG 239 (324)
T ss_pred eCCCChHHhhhcCHHHHHhCCCCeEEEECCCcc
Confidence 444444332 3667889999887765433
No 340
>PRK06196 oxidoreductase; Provisional
Probab=94.57 E-value=0.31 Score=44.40 Aligned_cols=81 Identities=21% Similarity=0.298 Sum_probs=49.2
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCCcee--eecCCCCcchHHHHHHHHHhhCCCCc
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGADET--AKVSTDIEDVDTDVGKIQNAMGSGID 258 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~d 258 (366)
.+.++||.| +|++|.+.+..+...|+ .|+.+.++.++.+.+ .++..-.. .|+ ++..+..+.+.++.+ ..+++|
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~-~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl-~d~~~v~~~~~~~~~-~~~~iD 101 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGA-HVIVPARRPDVAREALAGIDGVEVVMLDL-ADLESVRAFAERFLD-SGRRID 101 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhhCeEEEccC-CCHHHHHHHHHHHHh-cCCCCC
Confidence 467899998 68999998888777898 677777777665432 33321111 122 222233333333332 135799
Q ss_pred EEEEcCCC
Q 017793 259 VSFDCVGF 266 (366)
Q Consensus 259 ~vld~~g~ 266 (366)
+++.+.|.
T Consensus 102 ~li~nAg~ 109 (315)
T PRK06196 102 ILINNAGV 109 (315)
T ss_pred EEEECCCC
Confidence 99999873
No 341
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=94.56 E-value=0.32 Score=43.70 Aligned_cols=45 Identities=11% Similarity=0.145 Sum_probs=32.9
Q ss_pred HHHHhCCCC-CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCCh
Q 017793 174 HACRRANVG-PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV 218 (366)
Q Consensus 174 ~~l~~~~~~-~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~ 218 (366)
.+++...+. .+.++||+|+|+.+.+++..+...|+.++.++.+++
T Consensus 113 ~~l~~~~~~~~~k~vlvlGaGGaarAi~~~l~~~g~~~i~i~nRt~ 158 (288)
T PRK12749 113 RAIKESGFDIKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRD 158 (288)
T ss_pred HHHHhcCCCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence 344443332 567899999999898877766678988888888874
No 342
>PF01564 Spermine_synth: Spermine/spermidine synthase; InterPro: IPR001045 Synonym(s): Spermidine aminopropyltransferase A group of polyamine biosynthetic enzymes involved in the fifth (last) step in the biosynthesis of spermidine from arginine and methionine which includes; spermidine synthase (2.5.1.16 from EC), spermine synthase (2.5.1.22 from EC) and putrescine N-methyltransferase (2.1.1.53 from EC) []. The Thermotoga maritima spermidine synthase monomer consists of two domains: an N-terminal domain composed of six beta-strands, and a Rossmann-like C- terminal domain []. The larger C-terminal catalytic core domain consists of a seven-stranded beta-sheet flanked by nine alpha helices. This domain resembles a topology observed in a number of nucleotide and dinucleotide-binding enzymes, and in S-adenosyl-L-methionine (AdoMet)- dependent methyltransferase (MTases) [].; GO: 0003824 catalytic activity; PDB: 2E5W_C 2ZSU_E 2O0L_B 2O05_B 2O06_B 2O07_B 3RW9_B 2PWP_A 2HTE_B 3RIE_B ....
Probab=94.50 E-value=0.14 Score=44.97 Aligned_cols=98 Identities=16% Similarity=0.191 Sum_probs=63.0
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCc--------eeeecCCCCcchHHHHHHHHHhh
Q 017793 182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD--------ETAKVSTDIEDVDTDVGKIQNAM 253 (366)
Q Consensus 182 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~--------~~~~~~~~~~~~~~~~~~~~~~~ 253 (366)
....+|||+|.|. |..+-.+++......+.+++-+++-.+.++++-.. .+-.+. .|-...+++ .
T Consensus 75 ~~p~~VLiiGgG~-G~~~~ell~~~~~~~i~~VEiD~~Vv~~a~~~f~~~~~~~~d~r~~i~~---~Dg~~~l~~----~ 146 (246)
T PF01564_consen 75 PNPKRVLIIGGGD-GGTARELLKHPPVESITVVEIDPEVVELARKYFPEFSEGLDDPRVRIII---GDGRKFLKE----T 146 (246)
T ss_dssp SST-EEEEEESTT-SHHHHHHTTSTT-SEEEEEES-HHHHHHHHHHTHHHHTTGGSTTEEEEE---STHHHHHHT----S
T ss_pred CCcCceEEEcCCC-hhhhhhhhhcCCcceEEEEecChHHHHHHHHhchhhccccCCCceEEEE---hhhHHHHHh----c
Confidence 3679999998655 66677888877677899999999988888874211 111111 233333332 2
Q ss_pred CC-CCcEEE-EcCC---------ChHHHHHHHHhhcCCceEEEEc
Q 017793 254 GS-GIDVSF-DCVG---------FDKTMSTALNATRPGGKVCLIG 287 (366)
Q Consensus 254 ~~-~~d~vl-d~~g---------~~~~~~~~~~~l~~~G~~v~~g 287 (366)
.. .+|+++ |... +.+.++.+.++|+++|.++.-.
T Consensus 147 ~~~~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~~Gv~v~~~ 191 (246)
T PF01564_consen 147 QEEKYDVIIVDLTDPDGPAPNLFTREFYQLCKRRLKPDGVLVLQA 191 (246)
T ss_dssp SST-EEEEEEESSSTTSCGGGGSSHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCcccEEEEeCCCCCCCcccccCHHHHHHHHhhcCCCcEEEEEc
Confidence 34 899996 5443 2357888999999999988754
No 343
>PRK07890 short chain dehydrogenase; Provisional
Probab=94.48 E-value=0.34 Score=42.48 Aligned_cols=81 Identities=16% Similarity=0.189 Sum_probs=49.8
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHc---CCce---eeecCCCCcchHHHHHHHHHhhC
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL---GADE---TAKVSTDIEDVDTDVGKIQNAMG 254 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l---g~~~---~~~~~~~~~~~~~~~~~~~~~~~ 254 (366)
++.++||.| +|.+|...+..+...|+ .|+.+++++++.+.+ +++ +... ..|. ++...+...+.+.... -
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~-~ 80 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAARAGA-DVVLAARTAERLDEVAAEIDDLGRRALAVPTDI-TDEDQCANLVALALER-F 80 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEecCC-CCHHHHHHHHHHHHHH-c
Confidence 567899998 68999998888888899 677777777655433 222 2221 1222 2223333333333322 2
Q ss_pred CCCcEEEEcCCC
Q 017793 255 SGIDVSFDCVGF 266 (366)
Q Consensus 255 ~~~d~vld~~g~ 266 (366)
+.+|+++.+.|.
T Consensus 81 g~~d~vi~~ag~ 92 (258)
T PRK07890 81 GRVDALVNNAFR 92 (258)
T ss_pred CCccEEEECCcc
Confidence 468999998864
No 344
>PLN02253 xanthoxin dehydrogenase
Probab=94.46 E-value=0.35 Score=43.11 Aligned_cols=80 Identities=20% Similarity=0.279 Sum_probs=48.7
Q ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHH-HHHHcCC-cee----eecCCCCcchHHHHHHHHHhhCCC
Q 017793 184 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGA-DET----AKVSTDIEDVDTDVGKIQNAMGSG 256 (366)
Q Consensus 184 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 256 (366)
+.++||.| +|.+|.+.++.+...|+ .|+.++++++..+ ...+++. ..+ .|. .+.....+.+..+.+. -++
T Consensus 18 ~k~~lItGas~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-~d~~~~~~~~~~~~~~-~g~ 94 (280)
T PLN02253 18 GKVALVTGGATGIGESIVRLFHKHGA-KVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDV-TVEDDVSRAVDFTVDK-FGT 94 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCCceEEEEeec-CCHHHHHHHHHHHHHH-hCC
Confidence 67899998 69999988887777898 6777777665443 3333432 111 222 2223333334433332 247
Q ss_pred CcEEEEcCCC
Q 017793 257 IDVSFDCVGF 266 (366)
Q Consensus 257 ~d~vld~~g~ 266 (366)
+|+++.+.|.
T Consensus 95 id~li~~Ag~ 104 (280)
T PLN02253 95 LDIMVNNAGL 104 (280)
T ss_pred CCEEEECCCc
Confidence 9999998874
No 345
>PRK12747 short chain dehydrogenase; Provisional
Probab=94.46 E-value=1.1 Score=39.10 Aligned_cols=105 Identities=17% Similarity=0.229 Sum_probs=58.2
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEE-cCChhHHH-HHHH---cCCce-e--eecCCCCcchHHHHHHHHHh-
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIIT-DVDVQRLS-IARN---LGADE-T--AKVSTDIEDVDTDVGKIQNA- 252 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v-~~~~~~~~-~~~~---lg~~~-~--~~~~~~~~~~~~~~~~~~~~- 252 (366)
.+.++||.| +|++|.+.++.+...|+ .|+.+ .+++++.+ ...+ .+... . .|. .+..+....+.++.+.
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~~ 80 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGA-LVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANL-ESLHGVEALYSSLDNEL 80 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHHHHHHHhcCCceEEEeccc-CCHHHHHHHHHHHHHHh
Confidence 367899998 68999999988888898 45554 34434332 2222 23221 1 121 1112222233333211
Q ss_pred ----hCCCCcEEEEcCCCh----------H---------------HHHHHHHhhcCCceEEEEccc
Q 017793 253 ----MGSGIDVSFDCVGFD----------K---------------TMSTALNATRPGGKVCLIGLA 289 (366)
Q Consensus 253 ----~~~~~d~vld~~g~~----------~---------------~~~~~~~~l~~~G~~v~~g~~ 289 (366)
+.+++|+++.+.|.. + ..+.+++.+...|+++.++..
T Consensus 81 ~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~ 146 (252)
T PRK12747 81 QNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSA 146 (252)
T ss_pred hhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCc
Confidence 123799999988732 0 122345566677899888754
No 346
>PLN02780 ketoreductase/ oxidoreductase
Probab=94.43 E-value=0.36 Score=44.21 Aligned_cols=41 Identities=12% Similarity=0.168 Sum_probs=31.9
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA 224 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~ 224 (366)
.|.++||.| +|++|.+.++.+...|+ .|+.+++++++.+.+
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~-~Vil~~R~~~~l~~~ 93 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGL-NLVLVARNPDKLKDV 93 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCC-CEEEEECCHHHHHHH
Confidence 478999998 58999887776666799 577788888776543
No 347
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.42 E-value=0.43 Score=42.12 Aligned_cols=81 Identities=16% Similarity=0.185 Sum_probs=47.1
Q ss_pred CCCEEEEECC-C--HHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCcee--eecCCCCcchHHHHHHHHHhh
Q 017793 183 PETNVMIMGS-G--PIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADET--AKVSTDIEDVDTDVGKIQNAM 253 (366)
Q Consensus 183 ~~~~vlI~G~-g--~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~~--~~~~~~~~~~~~~~~~~~~~~ 253 (366)
.+.++||.|+ + ++|.+.++.+...|+ +|+.++++++..+.+ ++++.... .|. ++..+....++++.+.
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~-~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv-~~~~~v~~~~~~~~~~- 83 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGA-ELWFTYQSEVLEKRVKPLAEEIGCNFVSELDV-TNPKSISNLFDDIKEK- 83 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCC-EEEEEeCchHHHHHHHHHHHhcCCceEEEccC-CCHHHHHHHHHHHHHH-
Confidence 4678899985 4 799988777777899 566666654322222 23343222 232 2233444444444332
Q ss_pred CCCCcEEEEcCCC
Q 017793 254 GSGIDVSFDCVGF 266 (366)
Q Consensus 254 ~~~~d~vld~~g~ 266 (366)
-+.+|+++++.|.
T Consensus 84 ~g~iDilVnnag~ 96 (260)
T PRK06603 84 WGSFDFLLHGMAF 96 (260)
T ss_pred cCCccEEEEcccc
Confidence 2469999998863
No 348
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.42 E-value=1 Score=39.63 Aligned_cols=80 Identities=19% Similarity=0.273 Sum_probs=46.8
Q ss_pred CCCEEEEECC---CHHHHHHHHHHHHCCCCeEEEEcCCh---hHHH-HHHHcCCcee----eecCCCCcchHHHHHHHHH
Q 017793 183 PETNVMIMGS---GPIGLVTLLAARAFGAPRIIITDVDV---QRLS-IARNLGADET----AKVSTDIEDVDTDVGKIQN 251 (366)
Q Consensus 183 ~~~~vlI~G~---g~vG~~ai~la~~~g~~~vv~v~~~~---~~~~-~~~~lg~~~~----~~~~~~~~~~~~~~~~~~~ 251 (366)
.+.++||.|+ +++|.+.++.+...|+ +|+.+.++. ++.+ +.+++....+ .|. ++.++..+.+.++.+
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv-~d~~~v~~~~~~~~~ 83 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGA-KLVFTYAGERLEKEVRELADTLEGQESLLLPCDV-TSDEEITACFETIKE 83 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEecCcccchHHHHHHHHHcCCCceEEEecCC-CCHHHHHHHHHHHHH
Confidence 3678999984 5999998887777899 566664432 3333 3333421222 222 233344444444433
Q ss_pred hhCCCCcEEEEcCC
Q 017793 252 AMGSGIDVSFDCVG 265 (366)
Q Consensus 252 ~~~~~~d~vld~~g 265 (366)
. -+++|+++.+.|
T Consensus 84 ~-~g~ld~lv~nag 96 (257)
T PRK08594 84 E-VGVIHGVAHCIA 96 (257)
T ss_pred h-CCCccEEEECcc
Confidence 2 257999999876
No 349
>PRK12937 short chain dehydrogenase; Provisional
Probab=94.40 E-value=1.2 Score=38.54 Aligned_cols=104 Identities=16% Similarity=0.198 Sum_probs=58.6
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcC-ChhHHH-H---HHHcCCce-eeecC-CCCcchHHHHHHHHHhhC
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDV-DVQRLS-I---ARNLGADE-TAKVS-TDIEDVDTDVGKIQNAMG 254 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~-~~~~~~-~---~~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~ 254 (366)
++.++||.| +|.+|...++.+...|.+ ++.+.+ ++++.+ . +++.+... .+..+ ++..+..+.++++... -
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~ 81 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGFA-VAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETA-F 81 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-c
Confidence 467899998 699999988888888994 544433 333222 2 22333221 11111 1223333444443332 3
Q ss_pred CCCcEEEEcCCChH-------------------------HHHHHHHhhcCCceEEEEcc
Q 017793 255 SGIDVSFDCVGFDK-------------------------TMSTALNATRPGGKVCLIGL 288 (366)
Q Consensus 255 ~~~d~vld~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~ 288 (366)
+++|++|.+.|... ..+.+++.+..+|+++.++.
T Consensus 82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss 140 (245)
T PRK12937 82 GRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLST 140 (245)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEee
Confidence 57999999887420 12234455567788888864
No 350
>PRK05884 short chain dehydrogenase; Provisional
Probab=94.39 E-value=0.32 Score=41.88 Aligned_cols=74 Identities=18% Similarity=0.292 Sum_probs=45.8
Q ss_pred EEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCCcee-eecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793 186 NVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGADET-AKVSTDIEDVDTDVGKIQNAMGSGIDVSFD 262 (366)
Q Consensus 186 ~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~vld 262 (366)
+++|.| +|++|...++.+...|+ .|+.+++++++.+.+ ++++...+ .|. .+..++.+..+++ ...+|+++.
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~-~~~~~v~~~~~~~----~~~id~lv~ 75 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGH-KVTLVGARRDDLEVAAKELDVDAIVCDN-TDPASLEEARGLF----PHHLDTIVN 75 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCcEEecCC-CCHHHHHHHHHHH----hhcCcEEEE
Confidence 589998 68999998888888898 677777777766533 44443322 222 1222222222222 236899998
Q ss_pred cCC
Q 017793 263 CVG 265 (366)
Q Consensus 263 ~~g 265 (366)
+.|
T Consensus 76 ~ag 78 (223)
T PRK05884 76 VPA 78 (223)
T ss_pred CCC
Confidence 865
No 351
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=94.38 E-value=0.51 Score=44.25 Aligned_cols=35 Identities=31% Similarity=0.439 Sum_probs=31.2
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCC
Q 017793 183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD 217 (366)
Q Consensus 183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~ 217 (366)
.+.+|+|+|+|++|..++..+...|+..+..++.+
T Consensus 134 ~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d 168 (376)
T PRK08762 134 LEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHD 168 (376)
T ss_pred hcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 45789999999999999999999999889999876
No 352
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.37 E-value=0.51 Score=42.10 Aligned_cols=104 Identities=21% Similarity=0.249 Sum_probs=62.6
Q ss_pred CCCEEEEECC---CHHHHHHHHHHHHCCCCeEEEEcCChh---HHH-HHHHcCCcee--eecCCCCcchHHHHHHHHHhh
Q 017793 183 PETNVMIMGS---GPIGLVTLLAARAFGAPRIIITDVDVQ---RLS-IARNLGADET--AKVSTDIEDVDTDVGKIQNAM 253 (366)
Q Consensus 183 ~~~~vlI~G~---g~vG~~ai~la~~~g~~~vv~v~~~~~---~~~-~~~~lg~~~~--~~~~~~~~~~~~~~~~~~~~~ 253 (366)
.+.++||.|+ +++|.+.++.+...|+ .|+.+.++++ +.+ ..++++.... .|. ++.+...+.+.++.+.
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv-~d~~~v~~~~~~i~~~- 80 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGA-ELAFTYLNEALKKRVEPIAQELGSDYVYELDV-SKPEHFKSLAESLKKD- 80 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCceEEEecC-CCHHHHHHHHHHHHHH-
Confidence 3678999985 5899998888878899 5666666642 222 2244553322 232 2223444444444332
Q ss_pred CCCCcEEEEcCCCh--------------H---------------HHHHHHHhhcCCceEEEEccc
Q 017793 254 GSGIDVSFDCVGFD--------------K---------------TMSTALNATRPGGKVCLIGLA 289 (366)
Q Consensus 254 ~~~~d~vld~~g~~--------------~---------------~~~~~~~~l~~~G~~v~~g~~ 289 (366)
-+.+|+++++.|.. + ..+..+..+..+|+++.++..
T Consensus 81 ~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~ 145 (274)
T PRK08415 81 LGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYL 145 (274)
T ss_pred cCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecC
Confidence 35799999998841 0 223455566777998887643
No 353
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.37 E-value=0.32 Score=43.17 Aligned_cols=81 Identities=22% Similarity=0.402 Sum_probs=48.8
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChh----HHHHHHHcC-Cc-eeeecCCCCcchHHHHHHHHHhhCC
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQ----RLSIARNLG-AD-ETAKVSTDIEDVDTDVGKIQNAMGS 255 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~----~~~~~~~lg-~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (366)
.|+.|||.| ++++|.+.++=....|+ +++..+.+++ ..+.+++.| +. -..|. ++.++......++.+.. +
T Consensus 37 ~g~~vLITGgg~GlGr~ialefa~rg~-~~vl~Din~~~~~etv~~~~~~g~~~~y~cdi-s~~eei~~~a~~Vk~e~-G 113 (300)
T KOG1201|consen 37 SGEIVLITGGGSGLGRLIALEFAKRGA-KLVLWDINKQGNEETVKEIRKIGEAKAYTCDI-SDREEIYRLAKKVKKEV-G 113 (300)
T ss_pred cCCEEEEeCCCchHHHHHHHHHHHhCC-eEEEEeccccchHHHHHHHHhcCceeEEEecC-CCHHHHHHHHHHHHHhc-C
Confidence 589999998 57999764444444687 6777766554 334444444 11 12333 23344544444454433 4
Q ss_pred CCcEEEEcCCC
Q 017793 256 GIDVSFDCVGF 266 (366)
Q Consensus 256 ~~d~vld~~g~ 266 (366)
.+|++++++|.
T Consensus 114 ~V~ILVNNAGI 124 (300)
T KOG1201|consen 114 DVDILVNNAGI 124 (300)
T ss_pred CceEEEecccc
Confidence 79999999875
No 354
>PRK11933 yebU rRNA (cytosine-C(5)-)-methyltransferase RsmF; Reviewed
Probab=94.37 E-value=1.1 Score=43.27 Aligned_cols=99 Identities=20% Similarity=0.329 Sum_probs=64.5
Q ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCC-CCeEEEEcCChhHHHHH----HHcCCceeeecCCCCcchHHHHHHHHHhhC
Q 017793 180 NVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIA----RNLGADETAKVSTDIEDVDTDVGKIQNAMG 254 (366)
Q Consensus 180 ~~~~~~~vlI~G~g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~----~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (366)
..++|++||=.+|++ |-=+.++|..++ -..+++.+.+++|.+.+ +.+|...+...+.+...+... ..
T Consensus 110 ~~~pg~~VLD~CAAP-GgKTt~la~~l~~~g~lvA~D~~~~R~~~L~~nl~r~G~~nv~v~~~D~~~~~~~-------~~ 181 (470)
T PRK11933 110 DDNAPQRVLDMAAAP-GSKTTQIAALMNNQGAIVANEYSASRVKVLHANISRCGVSNVALTHFDGRVFGAA-------LP 181 (470)
T ss_pred CCCCCCEEEEeCCCc-cHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCchhhhhhh-------ch
Confidence 678999998887655 334566666653 33799999999987665 457877654443332222111 13
Q ss_pred CCCcEEE-E--cCCCh-------------------------HHHHHHHHhhcCCceEEEE
Q 017793 255 SGIDVSF-D--CVGFD-------------------------KTMSTALNATRPGGKVCLI 286 (366)
Q Consensus 255 ~~~d~vl-d--~~g~~-------------------------~~~~~~~~~l~~~G~~v~~ 286 (366)
..||.|+ | |+|.. ..+..+++.|++||+++..
T Consensus 182 ~~fD~ILvDaPCSG~G~~rk~p~~~~~~s~~~v~~l~~lQ~~iL~~A~~~LkpGG~LVYS 241 (470)
T PRK11933 182 ETFDAILLDAPCSGEGTVRKDPDALKNWSPESNLEIAATQRELIESAFHALKPGGTLVYS 241 (470)
T ss_pred hhcCeEEEcCCCCCCcccccCHHHhhhCCHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 4688886 4 55542 3566788899999998653
No 355
>PLN02589 caffeoyl-CoA O-methyltransferase
Probab=94.36 E-value=0.92 Score=39.71 Aligned_cols=103 Identities=15% Similarity=0.163 Sum_probs=66.8
Q ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHHHHhh-
Q 017793 180 NVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAM- 253 (366)
Q Consensus 180 ~~~~~~~vlI~G~g~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~- 253 (366)
+.....+||-+|++ +|..++.+|+.++- .+++.++.++++.+.+++ .|...-+.+.. .+..+.+.++...+
T Consensus 76 ~~~~ak~iLEiGT~-~GySal~la~al~~~g~v~tiE~~~~~~~~Ar~~~~~ag~~~~I~~~~--G~a~e~L~~l~~~~~ 152 (247)
T PLN02589 76 KLINAKNTMEIGVY-TGYSLLATALALPEDGKILAMDINRENYELGLPVIQKAGVAHKIDFRE--GPALPVLDQMIEDGK 152 (247)
T ss_pred HHhCCCEEEEEeCh-hhHHHHHHHhhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEe--ccHHHHHHHHHhccc
Confidence 34456789999964 48888888887632 379999999988776654 45433233222 34555555554321
Q ss_pred -CCCCcEEEEcCCCh---HHHHHHHHhhcCCceEEE
Q 017793 254 -GSGIDVSFDCVGFD---KTMSTALNATRPGGKVCL 285 (366)
Q Consensus 254 -~~~~d~vld~~g~~---~~~~~~~~~l~~~G~~v~ 285 (366)
.+.||.||--..-. ..++.++++|++||.++.
T Consensus 153 ~~~~fD~iFiDadK~~Y~~y~~~~l~ll~~GGviv~ 188 (247)
T PLN02589 153 YHGTFDFIFVDADKDNYINYHKRLIDLVKVGGVIGY 188 (247)
T ss_pred cCCcccEEEecCCHHHhHHHHHHHHHhcCCCeEEEE
Confidence 25799996544322 356677889999998765
No 356
>PLN02490 MPBQ/MSBQ methyltransferase
Probab=94.34 E-value=0.25 Score=45.34 Aligned_cols=104 Identities=22% Similarity=0.301 Sum_probs=65.0
Q ss_pred HHhCCC-CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhC
Q 017793 176 CRRANV-GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMG 254 (366)
Q Consensus 176 l~~~~~-~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (366)
++...+ +++.+||-+|+|. |..+..+++..+...+++++.+++-.+.+++.....-+.+.. .+. .++. ...
T Consensus 105 l~~~~l~~~~~~VLDLGcGt-G~~~l~La~~~~~~~VtgVD~S~~mL~~A~~k~~~~~i~~i~--gD~----e~lp-~~~ 176 (340)
T PLN02490 105 LEPADLSDRNLKVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIIE--GDA----EDLP-FPT 176 (340)
T ss_pred HhhcccCCCCCEEEEEecCC-cHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhhhccCCeEEe--ccH----HhCC-CCC
Confidence 343434 4678999999876 777888888775458999999988777776532111011100 111 1110 013
Q ss_pred CCCcEEEEcCC------ChHHHHHHHHhhcCCceEEEEc
Q 017793 255 SGIDVSFDCVG------FDKTMSTALNATRPGGKVCLIG 287 (366)
Q Consensus 255 ~~~d~vld~~g------~~~~~~~~~~~l~~~G~~v~~g 287 (366)
..||+|+.+-. ....+..+.+.|+++|+++..+
T Consensus 177 ~sFDvVIs~~~L~~~~d~~~~L~e~~rvLkPGG~LvIi~ 215 (340)
T PLN02490 177 DYADRYVSAGSIEYWPDPQRGIKEAYRVLKIGGKACLIG 215 (340)
T ss_pred CceeEEEEcChhhhCCCHHHHHHHHHHhcCCCcEEEEEE
Confidence 46998876431 1246778899999999998765
No 357
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=94.34 E-value=1.1 Score=36.47 Aligned_cols=89 Identities=18% Similarity=0.270 Sum_probs=56.4
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCC
Q 017793 186 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVG 265 (366)
Q Consensus 186 ~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g 265 (366)
+|.++|.|.+|...++-+...|. .|.+.++++++.+.+.+.|+... .+.. ++. ...|+||-|+.
T Consensus 3 ~Ig~IGlG~mG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~g~~~~-------~s~~----e~~----~~~dvvi~~v~ 66 (163)
T PF03446_consen 3 KIGFIGLGNMGSAMARNLAKAGY-EVTVYDRSPEKAEALAEAGAEVA-------DSPA----EAA----EQADVVILCVP 66 (163)
T ss_dssp EEEEE--SHHHHHHHHHHHHTTT-EEEEEESSHHHHHHHHHTTEEEE-------SSHH----HHH----HHBSEEEE-SS
T ss_pred EEEEEchHHHHHHHHHHHHhcCC-eEEeeccchhhhhhhHHhhhhhh-------hhhh----hHh----hcccceEeecc
Confidence 68899999999888888888898 68888999999888887774332 1112 222 23699999988
Q ss_pred ChHHHHHH------HHhhcCCceEEEEcccC
Q 017793 266 FDKTMSTA------LNATRPGGKVCLIGLAK 290 (366)
Q Consensus 266 ~~~~~~~~------~~~l~~~G~~v~~g~~~ 290 (366)
........ ...+.++..++..+...
T Consensus 67 ~~~~v~~v~~~~~i~~~l~~g~iiid~sT~~ 97 (163)
T PF03446_consen 67 DDDAVEAVLFGENILAGLRPGKIIIDMSTIS 97 (163)
T ss_dssp SHHHHHHHHHCTTHGGGS-TTEEEEE-SS--
T ss_pred cchhhhhhhhhhHHhhccccceEEEecCCcc
Confidence 76555443 33455666666665444
No 358
>COG1712 Predicted dinucleotide-utilizing enzyme [General function prediction only]
Probab=94.33 E-value=0.47 Score=40.29 Aligned_cols=83 Identities=18% Similarity=0.250 Sum_probs=52.4
Q ss_pred EEEEECCCHHHHHHHHHHHH--CCCCeEEEEcCChhHHHHHHH-cCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793 186 NVMIMGSGPIGLVTLLAARA--FGAPRIIITDVDVQRLSIARN-LGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD 262 (366)
Q Consensus 186 ~vlI~G~g~vG~~ai~la~~--~g~~~vv~v~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld 262 (366)
+|.|.|+|.+|.....+.+. ..++.+++.+++.++...+.+ ++...+. + +.++ -...|++++
T Consensus 2 ~vgiVGcGaIG~~l~e~v~~~~~~~e~v~v~D~~~ek~~~~~~~~~~~~~s-------~----ide~----~~~~DlvVE 66 (255)
T COG1712 2 KVGIVGCGAIGKFLLELVRDGRVDFELVAVYDRDEEKAKELEASVGRRCVS-------D----IDEL----IAEVDLVVE 66 (255)
T ss_pred eEEEEeccHHHHHHHHHHhcCCcceeEEEEecCCHHHHHHHHhhcCCCccc-------c----HHHH----hhccceeee
Confidence 57889999999999999884 357778888999988875544 3332211 1 1111 134666666
Q ss_pred cCCChHHHHHHHHhhcCCceE
Q 017793 263 CVGFDKTMSTALNATRPGGKV 283 (366)
Q Consensus 263 ~~g~~~~~~~~~~~l~~~G~~ 283 (366)
|.+..+..+...+.|..|-.+
T Consensus 67 aAS~~Av~e~~~~~L~~g~d~ 87 (255)
T COG1712 67 AASPEAVREYVPKILKAGIDV 87 (255)
T ss_pred eCCHHHHHHHhHHHHhcCCCE
Confidence 666555555555555554433
No 359
>PRK07478 short chain dehydrogenase; Provisional
Probab=94.33 E-value=0.53 Score=41.25 Aligned_cols=81 Identities=19% Similarity=0.204 Sum_probs=49.4
Q ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-H---HcCCce-eeecC-CCCcchHHHHHHHHHhhCCC
Q 017793 184 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-R---NLGADE-TAKVS-TDIEDVDTDVGKIQNAMGSG 256 (366)
Q Consensus 184 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~---~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~ 256 (366)
+.++||.| +|++|...+..+...|+ +|+.+++++++.+.+ . +.+.+. .+..+ ++.....+.+.++.+. -+.
T Consensus 6 ~k~~lItGas~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~ 83 (254)
T PRK07478 6 GKVAIITGASSGIGRAAAKLFAREGA-KVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVER-FGG 83 (254)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHh-cCC
Confidence 57899998 68999998888888899 677777777665433 2 233322 11111 1222333334333332 247
Q ss_pred CcEEEEcCCC
Q 017793 257 IDVSFDCVGF 266 (366)
Q Consensus 257 ~d~vld~~g~ 266 (366)
+|+++.+.|.
T Consensus 84 id~li~~ag~ 93 (254)
T PRK07478 84 LDIAFNNAGT 93 (254)
T ss_pred CCEEEECCCC
Confidence 9999999874
No 360
>PRK08643 acetoin reductase; Validated
Probab=94.33 E-value=0.51 Score=41.38 Aligned_cols=80 Identities=18% Similarity=0.257 Sum_probs=48.5
Q ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HH---cCCce-ee--ecCCCCcchHHHHHHHHHhhCC
Q 017793 184 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RN---LGADE-TA--KVSTDIEDVDTDVGKIQNAMGS 255 (366)
Q Consensus 184 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~---lg~~~-~~--~~~~~~~~~~~~~~~~~~~~~~ 255 (366)
+.++||.| +|.+|...++.+...|+ .|+.++++.++.+.+ .+ .+... .+ |+ ++.+...+.+.++.+. .+
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl-~~~~~~~~~~~~~~~~-~~ 78 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGF-KVAIVDYNEETAQAAADKLSKDGGKAIAVKADV-SDRDQVFAAVRQVVDT-FG 78 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCC-CCHHHHHHHHHHHHHH-cC
Confidence 46789998 68999998888888898 677777776654332 22 22221 11 21 1222333333333322 35
Q ss_pred CCcEEEEcCCC
Q 017793 256 GIDVSFDCVGF 266 (366)
Q Consensus 256 ~~d~vld~~g~ 266 (366)
++|++|.+.|.
T Consensus 79 ~id~vi~~ag~ 89 (256)
T PRK08643 79 DLNVVVNNAGV 89 (256)
T ss_pred CCCEEEECCCC
Confidence 79999999864
No 361
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=94.32 E-value=0.2 Score=50.66 Aligned_cols=77 Identities=22% Similarity=0.314 Sum_probs=50.5
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChh---------------------HHHHHHHcCCceeeecCCCCcc
Q 017793 183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQ---------------------RLSIARNLGADETAKVSTDIED 241 (366)
Q Consensus 183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~---------------------~~~~~~~lg~~~~~~~~~~~~~ 241 (366)
.+.+|+|+|+|+.|+.++..+...|. .|++++..+. ..+.++++|.+...+..- ..+
T Consensus 326 ~~~~VaIIGaGpAGLsaA~~L~~~G~-~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v-~~~ 403 (654)
T PRK12769 326 SDKRVAIIGAGPAGLACADVLARNGV-AVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEV-GKD 403 (654)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEe-CCc
Confidence 57899999999999999999999999 5777765432 345667777654322110 011
Q ss_pred hHHHHHHHHHhhCCCCcEEEEcCCCh
Q 017793 242 VDTDVGKIQNAMGSGIDVSFDCVGFD 267 (366)
Q Consensus 242 ~~~~~~~~~~~~~~~~d~vld~~g~~ 267 (366)
. .+.++ ..++|.||.+.|..
T Consensus 404 i--~~~~~----~~~~DavilAtGa~ 423 (654)
T PRK12769 404 I--SLESL----LEDYDAVFVGVGTY 423 (654)
T ss_pred C--CHHHH----HhcCCEEEEeCCCC
Confidence 1 11222 23699999988853
No 362
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.32 E-value=0.5 Score=41.77 Aligned_cols=81 Identities=20% Similarity=0.272 Sum_probs=47.5
Q ss_pred CCCEEEEECC---CHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCcee--eecCCCCcchHHHHHHHHHhh
Q 017793 183 PETNVMIMGS---GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADET--AKVSTDIEDVDTDVGKIQNAM 253 (366)
Q Consensus 183 ~~~~vlI~G~---g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~--~~~~~~~~~~~~~~~~~~~~~ 253 (366)
++.++||.|+ +++|.+.++.+...|+ .|+.+.+.++..+.+++ ++.... .|. ++.++..+.+.++.+.
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-~~~~~v~~~~~~~~~~- 81 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGA-ELAFTYVVDKLEERVRKMAAELDSELVFRCDV-ASDDEINQVFADLGKH- 81 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHhccCCceEEECCC-CCHHHHHHHHHHHHHH-
Confidence 4678999983 4899998887777899 56655444433333333 232222 222 2233444444444332
Q ss_pred CCCCcEEEEcCCC
Q 017793 254 GSGIDVSFDCVGF 266 (366)
Q Consensus 254 ~~~~d~vld~~g~ 266 (366)
-+++|+++++.|.
T Consensus 82 ~g~iD~lVnnAG~ 94 (261)
T PRK08690 82 WDGLDGLVHSIGF 94 (261)
T ss_pred hCCCcEEEECCcc
Confidence 3579999999864
No 363
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=94.27 E-value=0.55 Score=41.34 Aligned_cols=79 Identities=27% Similarity=0.307 Sum_probs=47.5
Q ss_pred EEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHc---CCceeeecC-CCCcchHHHHHHHHHhhCCCCcE
Q 017793 186 NVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL---GADETAKVS-TDIEDVDTDVGKIQNAMGSGIDV 259 (366)
Q Consensus 186 ~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l---g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~ 259 (366)
++||.| ++++|...++.+...|+ .|+.+++++++.+.+ .++ +....+..+ ++.++..+.+.++.+. -+++|+
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~-~g~id~ 79 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGA-RVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWEL-LGGIDA 79 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHh-cCCCCE
Confidence 689998 68999988888777899 677777777654332 222 211111111 2223333344433322 357999
Q ss_pred EEEcCCC
Q 017793 260 SFDCVGF 266 (366)
Q Consensus 260 vld~~g~ 266 (366)
++.+.|.
T Consensus 80 li~naG~ 86 (259)
T PRK08340 80 LVWNAGN 86 (259)
T ss_pred EEECCCC
Confidence 9999874
No 364
>PRK07576 short chain dehydrogenase; Provisional
Probab=94.27 E-value=0.58 Score=41.40 Aligned_cols=80 Identities=23% Similarity=0.306 Sum_probs=48.9
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HH---cCCce-e--eecCCCCcchHHHHHHHHHhhC
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RN---LGADE-T--AKVSTDIEDVDTDVGKIQNAMG 254 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~---lg~~~-~--~~~~~~~~~~~~~~~~~~~~~~ 254 (366)
++.++||.| +|.+|...++.+...|+ .|+.+++++++.+.+ ++ .+... . .|. ++..+....+++.... -
T Consensus 8 ~~k~ilItGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv-~~~~~i~~~~~~~~~~-~ 84 (264)
T PRK07576 8 AGKNVVVVGGTSGINLGIAQAFARAGA-NVAVASRSQEKVDAAVAQLQQAGPEGLGVSADV-RDYAAVEAAFAQIADE-F 84 (264)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEECCC-CCHHHHHHHHHHHHHH-c
Confidence 477999998 69999998888888898 678877776654322 22 23221 1 122 1222333334333322 2
Q ss_pred CCCcEEEEcCC
Q 017793 255 SGIDVSFDCVG 265 (366)
Q Consensus 255 ~~~d~vld~~g 265 (366)
+++|++|.+.|
T Consensus 85 ~~iD~vi~~ag 95 (264)
T PRK07576 85 GPIDVLVSGAA 95 (264)
T ss_pred CCCCEEEECCC
Confidence 46999998876
No 365
>PF08241 Methyltransf_11: Methyltransferase domain; InterPro: IPR013216 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (SAM) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals. The reaction is catalyzed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. This entry represents a methyltransferase domain found in a large variety of SAM-dependent methyltransferases including, but not limited to: Arsenite methyltransferase (2.1.1.137 from EC) which converts arsenical compounds to their methylated forms [] Biotin synthesis protein bioC, which is involved in the early stages of biotin biosyntheis [] Arginine N-methyltransferase 1, an arginine-methylating enzyme which acts on residues present in a glycine and argine-rich domain and can methylate histones [] Hexaprenyldihydroxybenzoate methyltransferase (2.1.1.114 from EC), a mitochodrial enzyme involved in ubiquinone biosynthesis [] A probable cobalt-precorrin-6Y C(15)-methyltransferase thought to be involved in adenosylcobalamin biosynthesis [] Sterol 24-C-methyltransferase (2.1.1.41 from EC), shown to participate in ergosterol biosynthesis [] 3-demethylubiquinone-9 3-methyltransferase (2.1.1.64 from EC) involved in ubiquinone biosynthesis [] Structural studies show that this domain forms the Rossman-like alpha-beta fold typical of SAM-dependent methyltransferases [, , ]. ; GO: 0008168 methyltransferase activity, 0008152 metabolic process; PDB: 3CGG_B 3CCF_B 3BKW_B 2PXX_A 3I9F_A 2YQZ_B 2YR0_A 3BUS_A 3EGE_A 3G5L_B ....
Probab=94.27 E-value=0.29 Score=35.19 Aligned_cols=87 Identities=22% Similarity=0.365 Sum_probs=54.4
Q ss_pred EECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeec-CCCCcchHHHHHHHHHhhCCCCcEEEEcCCC-
Q 017793 189 IMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKV-STDIEDVDTDVGKIQNAMGSGIDVSFDCVGF- 266 (366)
Q Consensus 189 I~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~- 266 (366)
-+|+| .|..+..+++. +...+++++.+++..+.+++........+ ..+..++. + ..+.||+|+....-
T Consensus 2 diG~G-~G~~~~~l~~~-~~~~v~~~D~~~~~~~~~~~~~~~~~~~~~~~d~~~l~-----~---~~~sfD~v~~~~~~~ 71 (95)
T PF08241_consen 2 DIGCG-TGRFAAALAKR-GGASVTGIDISEEMLEQARKRLKNEGVSFRQGDAEDLP-----F---PDNSFDVVFSNSVLH 71 (95)
T ss_dssp EET-T-TSHHHHHHHHT-TTCEEEEEES-HHHHHHHHHHTTTSTEEEEESBTTSSS-----S----TT-EEEEEEESHGG
T ss_pred EecCc-CCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHhcccccCchheeehHHhCc-----c---cccccccccccccee
Confidence 35666 48899999998 44489999999998888887553321111 11111110 1 14679999764322
Q ss_pred -----hHHHHHHHHhhcCCceEEE
Q 017793 267 -----DKTMSTALNATRPGGKVCL 285 (366)
Q Consensus 267 -----~~~~~~~~~~l~~~G~~v~ 285 (366)
...+..+.+.|+++|+++.
T Consensus 72 ~~~~~~~~l~e~~rvLk~gG~l~~ 95 (95)
T PF08241_consen 72 HLEDPEAALREIYRVLKPGGRLVI 95 (95)
T ss_dssp GSSHHHHHHHHHHHHEEEEEEEEE
T ss_pred eccCHHHHHHHHHHHcCcCeEEeC
Confidence 2467889999999999863
No 366
>PRK05717 oxidoreductase; Validated
Probab=94.25 E-value=0.58 Score=41.05 Aligned_cols=81 Identities=22% Similarity=0.272 Sum_probs=49.2
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHH-HHHHcCCce-e--eecCCCCcchHHHHHHHHHhhCCCC
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADE-T--AKVSTDIEDVDTDVGKIQNAMGSGI 257 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (366)
.|.++||.| +|.+|...+..+...|+ .|+.++++.++.+ ..++++... . .|. ++..+....+.++.+. -+.+
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-~~~~~~~~~~~~~~~~-~g~i 85 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAEGW-QVVLADLDRERGSKVAKALGENAWFIAMDV-ADEAQVAAGVAEVLGQ-FGRL 85 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHcCCceEEEEccC-CCHHHHHHHHHHHHHH-hCCC
Confidence 467899998 69999988888887898 6777766655443 334444321 1 121 1222333333333322 2469
Q ss_pred cEEEEcCCC
Q 017793 258 DVSFDCVGF 266 (366)
Q Consensus 258 d~vld~~g~ 266 (366)
|+++.+.|.
T Consensus 86 d~li~~ag~ 94 (255)
T PRK05717 86 DALVCNAAI 94 (255)
T ss_pred CEEEECCCc
Confidence 999998874
No 367
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=94.24 E-value=0.64 Score=42.39 Aligned_cols=101 Identities=16% Similarity=0.132 Sum_probs=68.9
Q ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH------HcC-----CceeeecCCCCcchHHHHHHH
Q 017793 181 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR------NLG-----ADETAKVSTDIEDVDTDVGKI 249 (366)
Q Consensus 181 ~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~------~lg-----~~~~~~~~~~~~~~~~~~~~~ 249 (366)
++.-+++||.|+|. |+++-++.|.=+...|.-++-+++-.++++ +.+ -..+..++. |.-++++.
T Consensus 287 ~~~a~~vLvlGGGD-GLAlRellkyP~~~qI~lVdLDP~miela~~~~vlr~~N~~sf~dpRv~Vv~d---DAf~wlr~- 361 (508)
T COG4262 287 VRGARSVLVLGGGD-GLALRELLKYPQVEQITLVDLDPRMIELASHATVLRALNQGSFSDPRVTVVND---DAFQWLRT- 361 (508)
T ss_pred ccccceEEEEcCCc-hHHHHHHHhCCCcceEEEEecCHHHHHHhhhhhHhhhhccCCccCCeeEEEec---cHHHHHHh-
Confidence 45668999999877 999999999888889999999998777765 222 122222222 33334433
Q ss_pred HHhhCCCCcEEEEcCCCh-----------HHHHHHHHhhcCCceEEEEccc
Q 017793 250 QNAMGSGIDVSFDCVGFD-----------KTMSTALNATRPGGKVCLIGLA 289 (366)
Q Consensus 250 ~~~~~~~~d~vld~~g~~-----------~~~~~~~~~l~~~G~~v~~g~~ 289 (366)
...++|.||--...+ +....+.+.|++.|.++.....
T Consensus 362 ---a~~~fD~vIVDl~DP~tps~~rlYS~eFY~ll~~~l~e~Gl~VvQags 409 (508)
T COG4262 362 ---AADMFDVVIVDLPDPSTPSIGRLYSVEFYRLLSRHLAETGLMVVQAGS 409 (508)
T ss_pred ---hcccccEEEEeCCCCCCcchhhhhhHHHHHHHHHhcCcCceEEEecCC
Confidence 356899986543333 2445677889999999876543
No 368
>PRK06125 short chain dehydrogenase; Provisional
Probab=94.24 E-value=0.56 Score=41.22 Aligned_cols=80 Identities=24% Similarity=0.309 Sum_probs=47.9
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-Hc----CCceeeecCCCCcchHHHHHHHHHhhCCC
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-NL----GADETAKVSTDIEDVDTDVGKIQNAMGSG 256 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~l----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (366)
.+.++||.| +|++|...++.+...|+ .|+.+++++++.+.+. ++ +.. +..+..+-.+. +.+.++.+. -+.
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~-~~~~~~D~~~~-~~~~~~~~~-~g~ 81 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGC-HLHLVARDADALEALAADLRAAHGVD-VAVHALDLSSP-EAREQLAAE-AGD 81 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhcCCc-eEEEEecCCCH-HHHHHHHHH-hCC
Confidence 367899998 58999998888888899 7888877776554322 22 221 11111111121 222222221 247
Q ss_pred CcEEEEcCCC
Q 017793 257 IDVSFDCVGF 266 (366)
Q Consensus 257 ~d~vld~~g~ 266 (366)
+|+++.+.|.
T Consensus 82 id~lv~~ag~ 91 (259)
T PRK06125 82 IDILVNNAGA 91 (259)
T ss_pred CCEEEECCCC
Confidence 9999999874
No 369
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=94.22 E-value=0.57 Score=41.07 Aligned_cols=81 Identities=22% Similarity=0.331 Sum_probs=49.5
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCce-ee--ecCCCCcchHHHHHHHHHhhC
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADE-TA--KVSTDIEDVDTDVGKIQNAMG 254 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~-~~--~~~~~~~~~~~~~~~~~~~~~ 254 (366)
.+.++||.| +|.+|...++.+...|+ .|+.+++++++.+.+ ++.|... .+ |. .+..++...+.++.. .-
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~-~~ 85 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGA-EVILNGRDPAKLAAAAESLKGQGLSAHALAFDV-TDHDAVRAAIDAFEA-EI 85 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEEccC-CCHHHHHHHHHHHHH-hc
Confidence 467999998 69999998888887899 677777776654322 2223221 11 22 122233333333322 23
Q ss_pred CCCcEEEEcCCC
Q 017793 255 SGIDVSFDCVGF 266 (366)
Q Consensus 255 ~~~d~vld~~g~ 266 (366)
+.+|++|.+.|.
T Consensus 86 ~~~d~li~~ag~ 97 (255)
T PRK07523 86 GPIDILVNNAGM 97 (255)
T ss_pred CCCCEEEECCCC
Confidence 579999999875
No 370
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=94.21 E-value=0.52 Score=43.08 Aligned_cols=80 Identities=23% Similarity=0.343 Sum_probs=48.7
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHH-HHHcCC--cee----eecCCCCcchHHHHHHHHHhhC
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARNLGA--DET----AKVSTDIEDVDTDVGKIQNAMG 254 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~lg~--~~~----~~~~~~~~~~~~~~~~~~~~~~ 254 (366)
.+.++||.| +|++|...++.+...|+ .|+.+++++++.+. ++++.. ..+ .|+ .+.....+.+.++.+ ..
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl-~~~~~v~~~~~~~~~-~~ 81 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGW-HVIMACRNLKKAEAAAQELGIPPDSYTIIHIDL-GDLDSVRRFVDDFRA-LG 81 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhccCCceEEEEecC-CCHHHHHHHHHHHHH-hC
Confidence 467899998 69999998888877898 67777777766543 333321 111 122 122223333333322 23
Q ss_pred CCCcEEEEcCC
Q 017793 255 SGIDVSFDCVG 265 (366)
Q Consensus 255 ~~~d~vld~~g 265 (366)
+.+|++|++.|
T Consensus 82 ~~iD~li~nAg 92 (322)
T PRK07453 82 KPLDALVCNAA 92 (322)
T ss_pred CCccEEEECCc
Confidence 56999999987
No 371
>CHL00194 ycf39 Ycf39; Provisional
Probab=94.21 E-value=0.29 Score=44.67 Aligned_cols=72 Identities=15% Similarity=0.221 Sum_probs=46.3
Q ss_pred EEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcC
Q 017793 186 NVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCV 264 (366)
Q Consensus 186 ~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~ 264 (366)
+|||.| +|-+|...++.+...|. .|.++.++.++...+...+.+.+. . +-.+. ..+.... .++|+||.++
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~-~V~~l~R~~~~~~~l~~~~v~~v~-~--Dl~d~-~~l~~al----~g~d~Vi~~~ 72 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGY-QVRCLVRNLRKASFLKEWGAELVY-G--DLSLP-ETLPPSF----KGVTAIIDAS 72 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcChHHhhhHhhcCCEEEE-C--CCCCH-HHHHHHH----CCCCEEEECC
Confidence 699998 69999999988888898 677777776665555555554321 1 11121 1222222 4689999987
Q ss_pred CC
Q 017793 265 GF 266 (366)
Q Consensus 265 g~ 266 (366)
+.
T Consensus 73 ~~ 74 (317)
T CHL00194 73 TS 74 (317)
T ss_pred CC
Confidence 53
No 372
>PLN02396 hexaprenyldihydroxybenzoate methyltransferase
Probab=94.19 E-value=0.42 Score=43.65 Aligned_cols=95 Identities=22% Similarity=0.234 Sum_probs=59.9
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcC----CceeeecCCCCcchHHHHHHHHHhhCCCC
Q 017793 182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLG----ADETAKVSTDIEDVDTDVGKIQNAMGSGI 257 (366)
Q Consensus 182 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (366)
.++.+||=+|||. |..+..+++ .|+ .|+++|.+++..+.+++.. ...-+.+.. .+. .++.. ..+.|
T Consensus 130 ~~g~~ILDIGCG~-G~~s~~La~-~g~-~V~GID~s~~~i~~Ar~~~~~~~~~~~i~~~~--~da----e~l~~-~~~~F 199 (322)
T PLN02396 130 FEGLKFIDIGCGG-GLLSEPLAR-MGA-TVTGVDAVDKNVKIARLHADMDPVTSTIEYLC--TTA----EKLAD-EGRKF 199 (322)
T ss_pred CCCCEEEEeeCCC-CHHHHHHHH-cCC-EEEEEeCCHHHHHHHHHHHHhcCcccceeEEe--cCH----HHhhh-ccCCC
Confidence 4677888899876 666777765 577 7999999999888876431 101111111 111 11111 14579
Q ss_pred cEEEEc-----CCC-hHHHHHHHHhhcCCceEEEE
Q 017793 258 DVSFDC-----VGF-DKTMSTALNATRPGGKVCLI 286 (366)
Q Consensus 258 d~vld~-----~g~-~~~~~~~~~~l~~~G~~v~~ 286 (366)
|+|+.. +.. ...+..+.+.|+|||.++..
T Consensus 200 D~Vi~~~vLeHv~d~~~~L~~l~r~LkPGG~liis 234 (322)
T PLN02396 200 DAVLSLEVIEHVANPAEFCKSLSALTIPNGATVLS 234 (322)
T ss_pred CEEEEhhHHHhcCCHHHHHHHHHHHcCCCcEEEEE
Confidence 999752 222 34677888899999998865
No 373
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=94.18 E-value=0.64 Score=40.81 Aligned_cols=82 Identities=17% Similarity=0.298 Sum_probs=48.7
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHH----HHHcCCcee-eecC-CCCcchHHHHHHHHHhhCC
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI----ARNLGADET-AKVS-TDIEDVDTDVGKIQNAMGS 255 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~----~~~lg~~~~-~~~~-~~~~~~~~~~~~~~~~~~~ 255 (366)
++.++||.| +|.+|...++.+...|. .|+.+.+++++.+. +++.+.... +..+ ++...+...+.++.. ..+
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-~~~ 83 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGA-AVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAE-RFG 83 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHH-HcC
Confidence 367899998 59999998888888899 57777777754432 233443321 1111 112222223332222 134
Q ss_pred CCcEEEEcCCC
Q 017793 256 GIDVSFDCVGF 266 (366)
Q Consensus 256 ~~d~vld~~g~ 266 (366)
++|+++.+.|.
T Consensus 84 ~~d~vi~~ag~ 94 (262)
T PRK13394 84 SVDILVSNAGI 94 (262)
T ss_pred CCCEEEECCcc
Confidence 68999998874
No 374
>KOG1270 consensus Methyltransferases [Coenzyme transport and metabolism]
Probab=94.16 E-value=0.18 Score=43.82 Aligned_cols=95 Identities=20% Similarity=0.265 Sum_probs=60.0
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcC-Cceeee----cCCCCcchHHHHHHHHHhhCCCCc
Q 017793 184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLG-ADETAK----VSTDIEDVDTDVGKIQNAMGSGID 258 (366)
Q Consensus 184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg-~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~d 258 (366)
|.+||=.|||+ |+...-||+ +|+ .|.++|.+++..+.+++-. .+.+.+ |.- +-....++.. ...||
T Consensus 90 g~~ilDvGCGg-GLLSepLAr-lga-~V~GID~s~~~V~vA~~h~~~dP~~~~~~~y~l--~~~~~~~E~~----~~~fD 160 (282)
T KOG1270|consen 90 GMKILDVGCGG-GLLSEPLAR-LGA-QVTGIDASDDMVEVANEHKKMDPVLEGAIAYRL--EYEDTDVEGL----TGKFD 160 (282)
T ss_pred CceEEEeccCc-cccchhhHh-hCC-eeEeecccHHHHHHHHHhhhcCchhccccceee--ehhhcchhhc----ccccc
Confidence 37788889887 889999998 588 7999999999888887642 111111 100 0001111122 34589
Q ss_pred EEEEcC-----C-ChHHHHHHHHhhcCCceEEEEc
Q 017793 259 VSFDCV-----G-FDKTMSTALNATRPGGKVCLIG 287 (366)
Q Consensus 259 ~vld~~-----g-~~~~~~~~~~~l~~~G~~v~~g 287 (366)
.|+..- - -.+..+.+++.|+|+|++++.-
T Consensus 161 aVvcsevleHV~dp~~~l~~l~~~lkP~G~lfitt 195 (282)
T KOG1270|consen 161 AVVCSEVLEHVKDPQEFLNCLSALLKPNGRLFITT 195 (282)
T ss_pred eeeeHHHHHHHhCHHHHHHHHHHHhCCCCceEeee
Confidence 887532 1 1235667888999999987653
No 375
>TIGR00537 hemK_rel_arch HemK-related putative methylase. The gene hemK from E. coli was found to contribute to heme biosynthesis and originally suggested to be protoporphyrinogen oxidase (Medline 95189105). Functional analysis of the nearest homolog in Saccharomyces cerevisiae, YNL063w, finds it is not protoporphyrinogen oxidase and sequence analysis suggests that HemK homologs have S-adenosyl-methionine-dependent methyltransferase activity (Medline 99237242). Homologs are found, usually in a single copy, in nearly all completed genomes, but varying somewhat in apparent domain architecture. This model represents an archaeal and eukaryotic protein family that lacks an N-terminal domain found in HemK and its eubacterial homologs. It is found in a single copy in the first six completed archaeal and eukaryotic genomes.
Probab=94.15 E-value=0.34 Score=40.11 Aligned_cols=93 Identities=24% Similarity=0.304 Sum_probs=57.1
Q ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHHHHhhCCC
Q 017793 181 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAMGSG 256 (366)
Q Consensus 181 ~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (366)
..++++||-+|+|. |..+..+++. +. .+++++.+++..+.+++ .+.... .+.. ++.+. . ...
T Consensus 17 ~~~~~~vLdlG~G~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~-~~~~---d~~~~---~----~~~ 82 (179)
T TIGR00537 17 ELKPDDVLEIGAGT-GLVAIRLKGK-GK-CILTTDINPFAVKELRENAKLNNVGLD-VVMT---DLFKG---V----RGK 82 (179)
T ss_pred hcCCCeEEEeCCCh-hHHHHHHHhc-CC-EEEEEECCHHHHHHHHHHHHHcCCceE-EEEc---ccccc---c----CCc
Confidence 34567888888766 6677777764 44 79999999988776654 232211 1111 11111 1 246
Q ss_pred CcEEEEcCCC---------------------------hHHHHHHHHhhcCCceEEEEc
Q 017793 257 IDVSFDCVGF---------------------------DKTMSTALNATRPGGKVCLIG 287 (366)
Q Consensus 257 ~d~vld~~g~---------------------------~~~~~~~~~~l~~~G~~v~~g 287 (366)
+|+|+-+..- ...+..+.+.|+++|+++.+.
T Consensus 83 fD~Vi~n~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~~~~~~ 140 (179)
T TIGR00537 83 FDVILFNPPYLPLEDDLRRGDWLDVAIDGGKDGRKVIDRFLDELPEILKEGGRVQLIQ 140 (179)
T ss_pred ccEEEECCCCCCCcchhcccchhhhhhhcCCchHHHHHHHHHhHHHhhCCCCEEEEEE
Confidence 8998865321 124666778999999988763
No 376
>PLN02928 oxidoreductase family protein
Probab=94.13 E-value=1.1 Score=41.59 Aligned_cols=100 Identities=18% Similarity=0.275 Sum_probs=59.0
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC--ceeeecCCCCcchHHHHHHHHHhhCCCCcEE
Q 017793 183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA--DETAKVSTDIEDVDTDVGKIQNAMGSGIDVS 260 (366)
Q Consensus 183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v 260 (366)
.|.++.|+|.|.+|...++.++..|+ +|++.+++..+.. ...++. ..+-.+...... ...+.++. ...|+|
T Consensus 158 ~gktvGIiG~G~IG~~vA~~l~afG~-~V~~~dr~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~L~ell----~~aDiV 230 (347)
T PLN02928 158 FGKTVFILGYGAIGIELAKRLRPFGV-KLLATRRSWTSEP-EDGLLIPNGDVDDLVDEKGG-HEDIYEFA----GEADIV 230 (347)
T ss_pred CCCEEEEECCCHHHHHHHHHHhhCCC-EEEEECCCCChhh-hhhhccccccccccccccCc-ccCHHHHH----hhCCEE
Confidence 47899999999999999999999999 7888877633211 111110 000000000000 11233332 358999
Q ss_pred EEcCCChHH-----HHHHHHhhcCCceEEEEccc
Q 017793 261 FDCVGFDKT-----MSTALNATRPGGKVCLIGLA 289 (366)
Q Consensus 261 ld~~g~~~~-----~~~~~~~l~~~G~~v~~g~~ 289 (366)
+.+.+.... -...+..|+++..++-++..
T Consensus 231 vl~lPlt~~T~~li~~~~l~~Mk~ga~lINvaRG 264 (347)
T PLN02928 231 VLCCTLTKETAGIVNDEFLSSMKKGALLVNIARG 264 (347)
T ss_pred EECCCCChHhhcccCHHHHhcCCCCeEEEECCCc
Confidence 888764221 12466788999888877643
No 377
>PRK10258 biotin biosynthesis protein BioC; Provisional
Probab=94.12 E-value=0.73 Score=40.44 Aligned_cols=98 Identities=21% Similarity=0.311 Sum_probs=63.4
Q ss_pred HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCc-eeeecCCCCcchHHHHHHHHHhhCC
Q 017793 177 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD-ETAKVSTDIEDVDTDVGKIQNAMGS 255 (366)
Q Consensus 177 ~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (366)
+.....++.+||-+|||. |..+..+++ .|. .++++|.+++..+.+++.... ..+. .+..+ +. ....
T Consensus 36 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~-~~~-~v~~~D~s~~~l~~a~~~~~~~~~~~--~d~~~-------~~-~~~~ 102 (251)
T PRK10258 36 AMLPQRKFTHVLDAGCGP-GWMSRYWRE-RGS-QVTALDLSPPMLAQARQKDAADHYLA--GDIES-------LP-LATA 102 (251)
T ss_pred HhcCccCCCeEEEeeCCC-CHHHHHHHH-cCC-eEEEEECCHHHHHHHHhhCCCCCEEE--cCccc-------Cc-CCCC
Confidence 334445678899999876 766666665 466 799999999988888775421 1111 11111 10 1134
Q ss_pred CCcEEEEcCCC------hHHHHHHHHhhcCCceEEEEc
Q 017793 256 GIDVSFDCVGF------DKTMSTALNATRPGGKVCLIG 287 (366)
Q Consensus 256 ~~d~vld~~g~------~~~~~~~~~~l~~~G~~v~~g 287 (366)
.||+|+....- ...+..+.+.|+++|.++...
T Consensus 103 ~fD~V~s~~~l~~~~d~~~~l~~~~~~Lk~gG~l~~~~ 140 (251)
T PRK10258 103 TFDLAWSNLAVQWCGNLSTALRELYRVVRPGGVVAFTT 140 (251)
T ss_pred cEEEEEECchhhhcCCHHHHHHHHHHHcCCCeEEEEEe
Confidence 69999875421 245777888999999988764
No 378
>PRK12743 oxidoreductase; Provisional
Probab=94.11 E-value=0.44 Score=41.84 Aligned_cols=80 Identities=20% Similarity=0.212 Sum_probs=46.9
Q ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEE-cCChhHHH----HHHHcCCce-e--eecCCCCcchHHHHHHHHHhhC
Q 017793 184 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIIT-DVDVQRLS----IARNLGADE-T--AKVSTDIEDVDTDVGKIQNAMG 254 (366)
Q Consensus 184 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v-~~~~~~~~----~~~~lg~~~-~--~~~~~~~~~~~~~~~~~~~~~~ 254 (366)
+.++||.| +|.+|...++.+...|++ |+.+ .++.++.+ .+++.+... . .|. ++.......+.++.+. -
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~-V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-~~~~~~~~~~~~~~~~-~ 78 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFD-IGITWHSDEEGAKETAEEVRSHGVRAEIRQLDL-SDLPEGAQALDKLIQR-L 78 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCCChHHHHHHHHHHHhcCCceEEEEccC-CCHHHHHHHHHHHHHH-c
Confidence 46899998 689999999988889994 5544 44444432 223344322 1 122 2222333334444332 2
Q ss_pred CCCcEEEEcCCC
Q 017793 255 SGIDVSFDCVGF 266 (366)
Q Consensus 255 ~~~d~vld~~g~ 266 (366)
+++|+++.+.|.
T Consensus 79 ~~id~li~~ag~ 90 (256)
T PRK12743 79 GRIDVLVNNAGA 90 (256)
T ss_pred CCCCEEEECCCC
Confidence 469999998874
No 379
>PRK06194 hypothetical protein; Provisional
Probab=94.11 E-value=0.62 Score=41.65 Aligned_cols=81 Identities=20% Similarity=0.336 Sum_probs=48.3
Q ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHH-HHHc---CCce-eeecC-CCCcchHHHHHHHHHhhCCC
Q 017793 184 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARNL---GADE-TAKVS-TDIEDVDTDVGKIQNAMGSG 256 (366)
Q Consensus 184 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~l---g~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~ 256 (366)
+.++||.| +|.+|...++.+...|+ .|+.++++.++.+. ..++ +... .+..+ ++..++.+.+..+.+ ..++
T Consensus 6 ~k~vlVtGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~-~~g~ 83 (287)
T PRK06194 6 GKVAVITGAASGFGLAFARIGAALGM-KLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALE-RFGA 83 (287)
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH-HcCC
Confidence 57899998 69999998888888898 67777777655432 2222 3221 11111 122233333333322 2356
Q ss_pred CcEEEEcCCC
Q 017793 257 IDVSFDCVGF 266 (366)
Q Consensus 257 ~d~vld~~g~ 266 (366)
+|+++.+.|.
T Consensus 84 id~vi~~Ag~ 93 (287)
T PRK06194 84 VHLLFNNAGV 93 (287)
T ss_pred CCEEEECCCC
Confidence 8999999875
No 380
>PRK05134 bifunctional 3-demethylubiquinone-9 3-methyltransferase/ 2-octaprenyl-6-hydroxy phenol methylase; Provisional
Probab=94.09 E-value=0.36 Score=41.81 Aligned_cols=98 Identities=20% Similarity=0.194 Sum_probs=61.3
Q ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc----CCceeeecCCCCcchHHHHHHHHHhhC
Q 017793 179 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GADETAKVSTDIEDVDTDVGKIQNAMG 254 (366)
Q Consensus 179 ~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (366)
....++.+||-+|+|. |..+..+++. ++ .+++++.+++..+.+++. +... .+.. .++.... ...+
T Consensus 44 ~~~~~~~~vLdiG~G~-G~~~~~l~~~-~~-~v~~iD~s~~~~~~a~~~~~~~~~~~--~~~~--~~~~~~~----~~~~ 112 (233)
T PRK05134 44 AGGLFGKRVLDVGCGG-GILSESMARL-GA-DVTGIDASEENIEVARLHALESGLKI--DYRQ--TTAEELA----AEHP 112 (233)
T ss_pred ccCCCCCeEEEeCCCC-CHHHHHHHHc-CC-eEEEEcCCHHHHHHHHHHHHHcCCce--EEEe--cCHHHhh----hhcC
Confidence 3356788899999875 7777777774 66 699999998877766542 2211 1111 1222211 1124
Q ss_pred CCCcEEEE-----cCCCh-HHHHHHHHhhcCCceEEEEc
Q 017793 255 SGIDVSFD-----CVGFD-KTMSTALNATRPGGKVCLIG 287 (366)
Q Consensus 255 ~~~d~vld-----~~g~~-~~~~~~~~~l~~~G~~v~~g 287 (366)
+.+|+|+. +.+.. ..+..+.+.|+++|.++...
T Consensus 113 ~~fD~Ii~~~~l~~~~~~~~~l~~~~~~L~~gG~l~v~~ 151 (233)
T PRK05134 113 GQFDVVTCMEMLEHVPDPASFVRACAKLVKPGGLVFFST 151 (233)
T ss_pred CCccEEEEhhHhhccCCHHHHHHHHHHHcCCCcEEEEEe
Confidence 67999964 33332 35677888999999987653
No 381
>PF13847 Methyltransf_31: Methyltransferase domain; PDB: 3T0I_B 3SVZ_B 3SXJ_A 3F4K_A 3GU3_B 2GH1_A 1R8Y_E 1R8X_B 2B3T_A 1T43_A ....
Probab=94.09 E-value=0.4 Score=38.49 Aligned_cols=98 Identities=20% Similarity=0.392 Sum_probs=63.2
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHHHHhhCCC
Q 017793 182 GPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAMGSG 256 (366)
Q Consensus 182 ~~~~~vlI~G~g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (366)
+.+.+||=+|||. |.....+++..+ ...++++|.+++..+.+++ ++.+.+.-+..+..++... + ...
T Consensus 2 ~~~~~iLDlGcG~-G~~~~~l~~~~~~~~~i~gvD~s~~~i~~a~~~~~~~~~~ni~~~~~d~~~l~~~---~----~~~ 73 (152)
T PF13847_consen 2 KSNKKILDLGCGT-GRLLIQLAKELNPGAKIIGVDISEEMIEYAKKRAKELGLDNIEFIQGDIEDLPQE---L----EEK 73 (152)
T ss_dssp TTTSEEEEET-TT-SHHHHHHHHHSTTTSEEEEEESSHHHHHHHHHHHHHTTSTTEEEEESBTTCGCGC---S----STT
T ss_pred CCCCEEEEecCcC-cHHHHHHHHhcCCCCEEEEEECcHHHHHHhhcccccccccccceEEeehhccccc---c----CCC
Confidence 4677888888876 777788885442 2379999999998777765 5665322222221221110 0 157
Q ss_pred CcEEEEcC-----CCh-HHHHHHHHhhcCCceEEEEc
Q 017793 257 IDVSFDCV-----GFD-KTMSTALNATRPGGKVCLIG 287 (366)
Q Consensus 257 ~d~vld~~-----g~~-~~~~~~~~~l~~~G~~v~~g 287 (366)
||+|+... ... ..+..+.+.|+++|.++...
T Consensus 74 ~D~I~~~~~l~~~~~~~~~l~~~~~~lk~~G~~i~~~ 110 (152)
T PF13847_consen 74 FDIIISNGVLHHFPDPEKVLKNIIRLLKPGGILIISD 110 (152)
T ss_dssp EEEEEEESTGGGTSHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eeEEEEcCchhhccCHHHHHHHHHHHcCCCcEEEEEE
Confidence 99999863 222 46778889999999988653
No 382
>PRK07454 short chain dehydrogenase; Provisional
Probab=94.08 E-value=0.74 Score=39.93 Aligned_cols=82 Identities=18% Similarity=0.241 Sum_probs=50.0
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCce-eeecC-CCCcchHHHHHHHHHhhCC
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR----NLGADE-TAKVS-TDIEDVDTDVGKIQNAMGS 255 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~----~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~ 255 (366)
...++||.| +|.+|...+..+...|. +|+++++++++.+.+. +.+... .+..+ ++.+++...+.++.+. -+
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~ 82 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGW-DLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQ-FG 82 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHH-cC
Confidence 456899998 69999998888888898 6888878776554332 222221 11111 2222333333333321 34
Q ss_pred CCcEEEEcCCC
Q 017793 256 GIDVSFDCVGF 266 (366)
Q Consensus 256 ~~d~vld~~g~ 266 (366)
++|+++.+.|.
T Consensus 83 ~id~lv~~ag~ 93 (241)
T PRK07454 83 CPDVLINNAGM 93 (241)
T ss_pred CCCEEEECCCc
Confidence 69999999874
No 383
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.07 E-value=0.76 Score=41.05 Aligned_cols=85 Identities=15% Similarity=0.221 Sum_probs=58.2
Q ss_pred HHHHhCCCC-CCCEEEEECCCH-HHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHH
Q 017793 174 HACRRANVG-PETNVMIMGSGP-IGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN 251 (366)
Q Consensus 174 ~~l~~~~~~-~~~~vlI~G~g~-vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~ 251 (366)
..++..++. .|.+++|+|.|. +|.-+.+++...|+ .|.++.+.. .+ +.+.
T Consensus 147 ~ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~ga-tVtv~~s~t---------------------~~----l~~~-- 198 (286)
T PRK14175 147 EILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNA-SVTILHSRS---------------------KD----MASY-- 198 (286)
T ss_pred HHHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCc---------------------hh----HHHH--
Confidence 344555433 689999999765 99999999999999 455554321 11 1111
Q ss_pred hhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccC
Q 017793 252 AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK 290 (366)
Q Consensus 252 ~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 290 (366)
-+.+|+|+-++|.+..+.. +.++++..++.+|...
T Consensus 199 --~~~ADIVIsAvg~p~~i~~--~~vk~gavVIDvGi~~ 233 (286)
T PRK14175 199 --LKDADVIVSAVGKPGLVTK--DVVKEGAVIIDVGNTP 233 (286)
T ss_pred --HhhCCEEEECCCCCcccCH--HHcCCCcEEEEcCCCc
Confidence 1468999999998755444 4688888888887644
No 384
>PRK06701 short chain dehydrogenase; Provisional
Probab=94.07 E-value=1.8 Score=38.87 Aligned_cols=82 Identities=17% Similarity=0.143 Sum_probs=45.9
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChh-HH----HHHHHcCCce-eeecC-CCCcchHHHHHHHHHhhC
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQ-RL----SIARNLGADE-TAKVS-TDIEDVDTDVGKIQNAMG 254 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~-~~----~~~~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~ 254 (366)
++.++||.| +|.+|...+..+...|+ .|+.+.++++ .. +.++..+... .+..+ .+...+...+.++.+. .
T Consensus 45 ~~k~iLItGasggIG~~la~~l~~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~-~ 122 (290)
T PRK06701 45 KGKVALITGGDSGIGRAVAVLFAKEGA-DIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRE-L 122 (290)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH-c
Confidence 467899998 68999988887777898 5666655432 21 1222223322 11111 1222333333333322 2
Q ss_pred CCCcEEEEcCCC
Q 017793 255 SGIDVSFDCVGF 266 (366)
Q Consensus 255 ~~~d~vld~~g~ 266 (366)
+++|++|.+.|.
T Consensus 123 ~~iD~lI~~Ag~ 134 (290)
T PRK06701 123 GRLDILVNNAAF 134 (290)
T ss_pred CCCCEEEECCcc
Confidence 468999998874
No 385
>PRK06138 short chain dehydrogenase; Provisional
Probab=94.06 E-value=0.63 Score=40.57 Aligned_cols=82 Identities=22% Similarity=0.274 Sum_probs=48.4
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHH-HHHc--CCc-eeeecC-CCCcchHHHHHHHHHhhCCC
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARNL--GAD-ETAKVS-TDIEDVDTDVGKIQNAMGSG 256 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~l--g~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~ 256 (366)
++.++||.| +|.+|...++.+...|+ +|+.+.++.++.+. ..++ +.. ..+..+ ++.....+.+.++.+. .++
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~-~~~ 81 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGA-RVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAAR-WGR 81 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCC-eEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH-cCC
Confidence 356899998 69999988887777898 67777777655432 2222 221 111111 1222333333333322 357
Q ss_pred CcEEEEcCCC
Q 017793 257 IDVSFDCVGF 266 (366)
Q Consensus 257 ~d~vld~~g~ 266 (366)
+|+++.+.|.
T Consensus 82 id~vi~~ag~ 91 (252)
T PRK06138 82 LDVLVNNAGF 91 (252)
T ss_pred CCEEEECCCC
Confidence 9999999884
No 386
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=94.05 E-value=0.51 Score=38.23 Aligned_cols=80 Identities=20% Similarity=0.254 Sum_probs=48.9
Q ss_pred EEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCC--hhHHH-HH---HHcCCceeeecC---CCCcchHHHHHHHHHhhCC
Q 017793 186 NVMIMG-SGPIGLVTLLAARAFGAPRIIITDVD--VQRLS-IA---RNLGADETAKVS---TDIEDVDTDVGKIQNAMGS 255 (366)
Q Consensus 186 ~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~--~~~~~-~~---~~lg~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 255 (366)
++||.| ++++|...++.+-..|..+++.+.++ .++.+ +. +..+ ..+..+. ++.++....+.++. ....
T Consensus 2 ~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~-~~~~~~~~D~~~~~~~~~~~~~~~-~~~~ 79 (167)
T PF00106_consen 2 TVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPG-AKITFIECDLSDPESIRALIEEVI-KRFG 79 (167)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTT-SEEEEEESETTSHHHHHHHHHHHH-HHHS
T ss_pred EEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccccc-cccccccccccccccccccccccc-cccc
Confidence 688998 69999887777776677678888777 33333 32 3334 3322221 22334444444443 2346
Q ss_pred CCcEEEEcCCCh
Q 017793 256 GIDVSFDCVGFD 267 (366)
Q Consensus 256 ~~d~vld~~g~~ 267 (366)
.+|++|.+.|..
T Consensus 80 ~ld~li~~ag~~ 91 (167)
T PF00106_consen 80 PLDILINNAGIF 91 (167)
T ss_dssp SESEEEEECSCT
T ss_pred cccccccccccc
Confidence 799999998864
No 387
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=94.03 E-value=0.67 Score=40.71 Aligned_cols=81 Identities=23% Similarity=0.318 Sum_probs=50.0
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCce-e--eecCCCCcchHHHHHHHHHhhC
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR----NLGADE-T--AKVSTDIEDVDTDVGKIQNAMG 254 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~----~lg~~~-~--~~~~~~~~~~~~~~~~~~~~~~ 254 (366)
++.++||.| +|.+|...++.+...|+ .|+.++++.++.+.+. +.+... . .|. ++...+...+.++... .
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl-~d~~~i~~~~~~~~~~-~ 87 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGA-RVVLSARKAEELEEAAAHLEALGIDALWIAADV-ADEADIERLAEETLER-F 87 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccC-CCHHHHHHHHHHHHHH-h
Confidence 468899998 69999998888888899 6777877776654433 222221 1 122 1222333333333321 2
Q ss_pred CCCcEEEEcCCC
Q 017793 255 SGIDVSFDCVGF 266 (366)
Q Consensus 255 ~~~d~vld~~g~ 266 (366)
+++|.++.+.|.
T Consensus 88 ~~id~vi~~ag~ 99 (259)
T PRK08213 88 GHVDILVNNAGA 99 (259)
T ss_pred CCCCEEEECCCC
Confidence 479999999874
No 388
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=94.00 E-value=0.56 Score=41.21 Aligned_cols=81 Identities=27% Similarity=0.318 Sum_probs=49.6
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc---CCce---eeecCCCCcchHHHHHHHHHhhCC
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL---GADE---TAKVSTDIEDVDTDVGKIQNAMGS 255 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l---g~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 255 (366)
.+.++||.| +|.+|.+.++.+...|+ .|+.+++++...+..+++ +.+. ..|+ ++..+..+.+.++.+. -+
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~-~~ 83 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGA-RVVLVDRSELVHEVAAELRAAGGEALALTADL-ETYAGAQAAMAAAVEA-FG 83 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCchHHHHHHHHHHhcCCeEEEEEEeC-CCHHHHHHHHHHHHHH-cC
Confidence 357899998 69999998888888898 677777765433333333 3321 1232 2222333444443332 34
Q ss_pred CCcEEEEcCCC
Q 017793 256 GIDVSFDCVGF 266 (366)
Q Consensus 256 ~~d~vld~~g~ 266 (366)
++|+++.+.|.
T Consensus 84 ~id~lv~nAg~ 94 (260)
T PRK12823 84 RIDVLINNVGG 94 (260)
T ss_pred CCeEEEECCcc
Confidence 79999999873
No 389
>PRK12335 tellurite resistance protein TehB; Provisional
Probab=93.99 E-value=0.14 Score=46.06 Aligned_cols=91 Identities=18% Similarity=0.254 Sum_probs=57.1
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHHHHhhCCCCc
Q 017793 183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAMGSGID 258 (366)
Q Consensus 183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 258 (366)
++.+||-+|||. |..++.+++. |. .|+++|.+++..+.+++ .+...-.. . .+... .. ....+|
T Consensus 120 ~~~~vLDlGcG~-G~~~~~la~~-g~-~V~avD~s~~ai~~~~~~~~~~~l~v~~~-~---~D~~~----~~--~~~~fD 186 (287)
T PRK12335 120 KPGKALDLGCGQ-GRNSLYLALL-GF-DVTAVDINQQSLENLQEIAEKENLNIRTG-L---YDINS----AS--IQEEYD 186 (287)
T ss_pred CCCCEEEeCCCC-CHHHHHHHHC-CC-EEEEEECCHHHHHHHHHHHHHcCCceEEE-E---echhc----cc--ccCCcc
Confidence 345899999876 7777777774 77 79999999987776654 23311110 0 11111 00 135799
Q ss_pred EEEEcCC--------ChHHHHHHHHhhcCCceEEEE
Q 017793 259 VSFDCVG--------FDKTMSTALNATRPGGKVCLI 286 (366)
Q Consensus 259 ~vld~~g--------~~~~~~~~~~~l~~~G~~v~~ 286 (366)
+|+.+.- -...+..+.+.|+++|.++.+
T Consensus 187 ~I~~~~vl~~l~~~~~~~~l~~~~~~LkpgG~~l~v 222 (287)
T PRK12335 187 FILSTVVLMFLNRERIPAIIKNMQEHTNPGGYNLIV 222 (287)
T ss_pred EEEEcchhhhCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 9987532 123566778889999996654
No 390
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]
Probab=93.99 E-value=0.46 Score=40.84 Aligned_cols=33 Identities=27% Similarity=0.436 Sum_probs=29.3
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcC
Q 017793 184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDV 216 (366)
Q Consensus 184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~ 216 (366)
.+.|+|.|.|++|.+++..+.+.|+.++..++-
T Consensus 30 ~~~V~VvGiGGVGSw~veALaRsGig~itlID~ 62 (263)
T COG1179 30 QAHVCVVGIGGVGSWAVEALARSGIGRITLIDM 62 (263)
T ss_pred hCcEEEEecCchhHHHHHHHHHcCCCeEEEEec
Confidence 578999999999999999999999988887763
No 391
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=93.99 E-value=0.74 Score=40.36 Aligned_cols=81 Identities=20% Similarity=0.231 Sum_probs=49.6
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChh--HHHHHHHcCCce-e--eecCCCCcchHHHHHHHHHhhCCC
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQ--RLSIARNLGADE-T--AKVSTDIEDVDTDVGKIQNAMGSG 256 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~--~~~~~~~lg~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~ 256 (366)
.+.++||.| ++++|.+.++.+...|+ +|+.+.+++. ..+.+++.+.+. . .|. ++.++..+.+.++.+. -++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-~~~~~~~~~~~~~~~~-~g~ 83 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGA-DIVGVGVAEAPETQAQVEALGRKFHFITADL-IQQKDIDSIVSQAVEV-MGH 83 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHcCCeEEEEEeCC-CCHHHHHHHHHHHHHH-cCC
Confidence 467899998 68999998888888999 5666655432 223344455332 1 222 2233444444444332 346
Q ss_pred CcEEEEcCCC
Q 017793 257 IDVSFDCVGF 266 (366)
Q Consensus 257 ~d~vld~~g~ 266 (366)
+|+++.+.|.
T Consensus 84 iD~lv~~ag~ 93 (251)
T PRK12481 84 IDILINNAGI 93 (251)
T ss_pred CCEEEECCCc
Confidence 9999999874
No 392
>PRK05875 short chain dehydrogenase; Provisional
Probab=93.99 E-value=0.67 Score=41.16 Aligned_cols=81 Identities=21% Similarity=0.296 Sum_probs=48.9
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHH-HHHcC----Ccee--e--ecCCCCcchHHHHHHHHHh
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARNLG----ADET--A--KVSTDIEDVDTDVGKIQNA 252 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~lg----~~~~--~--~~~~~~~~~~~~~~~~~~~ 252 (366)
++.++||.| +|.+|...++.+...|+ .|+.+.+++++.+. .+++. ...+ + |. .+..+....+++..+
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl-~~~~~~~~~~~~~~~- 82 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGA-AVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADV-TDEDQVARAVDAATA- 82 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCC-CCHHHHHHHHHHHHH-
Confidence 367899999 69999999998888899 67777777655432 22221 1111 1 22 122233333333322
Q ss_pred hCCCCcEEEEcCCC
Q 017793 253 MGSGIDVSFDCVGF 266 (366)
Q Consensus 253 ~~~~~d~vld~~g~ 266 (366)
..+++|++|.+.|.
T Consensus 83 ~~~~~d~li~~ag~ 96 (276)
T PRK05875 83 WHGRLHGVVHCAGG 96 (276)
T ss_pred HcCCCCEEEECCCc
Confidence 13478999998873
No 393
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=93.98 E-value=0.54 Score=41.21 Aligned_cols=81 Identities=20% Similarity=0.338 Sum_probs=50.2
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCce-ee--ecCCCCcchHHHHHHHHHhhC
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADE-TA--KVSTDIEDVDTDVGKIQNAMG 254 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~-~~--~~~~~~~~~~~~~~~~~~~~~ 254 (366)
++.++||.| +|.+|...+..+...|+ .|+.+++++++.+.+ ++.+... .+ |. ++..++...+.++... -
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl-~~~~~~~~~~~~~~~~-~ 86 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGA-HVLVNGRNAATLEAAVAALRAAGGAAEALAFDI-ADEEAVAAAFARIDAE-H 86 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEccC-CCHHHHHHHHHHHHHh-c
Confidence 478899998 68999988887777899 678887776654322 2333221 11 22 2223344444444332 2
Q ss_pred CCCcEEEEcCCC
Q 017793 255 SGIDVSFDCVGF 266 (366)
Q Consensus 255 ~~~d~vld~~g~ 266 (366)
+.+|.++.+.|.
T Consensus 87 ~~id~vi~~ag~ 98 (256)
T PRK06124 87 GRLDILVNNVGA 98 (256)
T ss_pred CCCCEEEECCCC
Confidence 468999998874
No 394
>PLN02336 phosphoethanolamine N-methyltransferase
Probab=93.97 E-value=0.23 Score=48.23 Aligned_cols=102 Identities=20% Similarity=0.284 Sum_probs=65.2
Q ss_pred HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc--CCceeeecCCCCcchHHHHHHHHHhhC
Q 017793 177 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL--GADETAKVSTDIEDVDTDVGKIQNAMG 254 (366)
Q Consensus 177 ~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l--g~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (366)
+...++++.+||-+|+|. |..++.+++..+. .+++++.+++..+.+++. +....+.+.. .++.. .. ...
T Consensus 260 ~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvDiS~~~l~~A~~~~~~~~~~v~~~~--~d~~~----~~-~~~ 330 (475)
T PLN02336 260 DKLDLKPGQKVLDVGCGI-GGGDFYMAENFDV-HVVGIDLSVNMISFALERAIGRKCSVEFEV--ADCTK----KT-YPD 330 (475)
T ss_pred HhcCCCCCCEEEEEeccC-CHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHhhcCCCceEEEE--cCccc----CC-CCC
Confidence 344567889999999876 6677888887787 799999998887777552 2111011100 11110 00 013
Q ss_pred CCCcEEEEcCC-----C-hHHHHHHHHhhcCCceEEEEc
Q 017793 255 SGIDVSFDCVG-----F-DKTMSTALNATRPGGKVCLIG 287 (366)
Q Consensus 255 ~~~d~vld~~g-----~-~~~~~~~~~~l~~~G~~v~~g 287 (366)
..||+|+..-. . ...+..+.+.|++||+++...
T Consensus 331 ~~fD~I~s~~~l~h~~d~~~~l~~~~r~LkpgG~l~i~~ 369 (475)
T PLN02336 331 NSFDVIYSRDTILHIQDKPALFRSFFKWLKPGGKVLISD 369 (475)
T ss_pred CCEEEEEECCcccccCCHHHHHHHHHHHcCCCeEEEEEE
Confidence 46999986321 1 346788899999999988754
No 395
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=93.97 E-value=0.53 Score=41.13 Aligned_cols=78 Identities=19% Similarity=0.278 Sum_probs=48.8
Q ss_pred EEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCce-e--eecCCCCcchHHHHHHHHHhhCCCCcEE
Q 017793 186 NVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-LGADE-T--AKVSTDIEDVDTDVGKIQNAMGSGIDVS 260 (366)
Q Consensus 186 ~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~d~v 260 (366)
+++|.| +|.+|.+.+..+...|+ +|+.+++++++.+.+.. ++... . .|. ++..++.+.+.++.+. .+++|.+
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl-~~~~~i~~~~~~~~~~-~~~id~v 78 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDV-RNRAAIEEMLASLPAE-WRNIDVL 78 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEEecC-CCHHHHHHHHHHHHHH-cCCCCEE
Confidence 689998 69999998888888898 67888888776654433 34321 1 122 1222333333333221 3479999
Q ss_pred EEcCCC
Q 017793 261 FDCVGF 266 (366)
Q Consensus 261 ld~~g~ 266 (366)
+.+.|.
T Consensus 79 i~~ag~ 84 (248)
T PRK10538 79 VNNAGL 84 (248)
T ss_pred EECCCc
Confidence 998864
No 396
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=93.95 E-value=2.5 Score=36.29 Aligned_cols=115 Identities=10% Similarity=-0.013 Sum_probs=61.2
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCC--hhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEE
Q 017793 183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD--VQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS 260 (366)
Q Consensus 183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~--~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v 260 (366)
.+.+|||.|+|.++.-=+..+...|+ .|.++... ++=.+++ +.+.-..+ . ..+... . -.++++|
T Consensus 24 ~~~~VLVVGGG~VA~RK~~~Ll~~gA-~VtVVap~i~~el~~l~-~~~~i~~~---~--r~~~~~--d-----l~g~~LV 89 (223)
T PRK05562 24 NKIKVLIIGGGKAAFIKGKTFLKKGC-YVYILSKKFSKEFLDLK-KYGNLKLI---K--GNYDKE--F-----IKDKHLI 89 (223)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCCCHHHHHHH-hCCCEEEE---e--CCCChH--H-----hCCCcEE
Confidence 46799999999999887777777898 55555332 2222222 22221111 1 122111 1 2479999
Q ss_pred EEcCCChHHHHHHHHhhcCCceEEEEcccCCCceeechHhhhc-CcEEEEee
Q 017793 261 FDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAR-EVDVIGIF 311 (366)
Q Consensus 261 ld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~~~ 311 (366)
|.|.+.++.-.......+..+.++.....+....+....+..+ .+.+.-+.
T Consensus 90 iaATdD~~vN~~I~~~a~~~~~lvn~vd~p~~~dFi~PAiv~rg~l~IaIST 141 (223)
T PRK05562 90 VIATDDEKLNNKIRKHCDRLYKLYIDCSDYKKGLCIIPYQRSTKNFVFALNT 141 (223)
T ss_pred EECCCCHHHHHHHHHHHHHcCCeEEEcCCcccCeEEeeeEEecCCEEEEEEC
Confidence 9999977544444444455566655443333333333333222 34444443
No 397
>PRK05854 short chain dehydrogenase; Provisional
Probab=93.95 E-value=0.69 Score=42.15 Aligned_cols=81 Identities=15% Similarity=0.204 Sum_probs=47.8
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHH-HHHc----CCcee----eecCCCCcchHHHHHHHHHh
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARNL----GADET----AKVSTDIEDVDTDVGKIQNA 252 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~l----g~~~~----~~~~~~~~~~~~~~~~~~~~ 252 (366)
.+.+++|.| ++++|.+.++.+...|+ +|+.+.+++++.+. ++++ +...+ .|+ .+..+..+...++.+
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~-~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl-~d~~sv~~~~~~~~~- 89 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGA-EVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDL-SSLASVAALGEQLRA- 89 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecC-CCHHHHHHHHHHHHH-
Confidence 367899998 68999998887777898 67777677665432 2222 11111 222 122223333333322
Q ss_pred hCCCCcEEEEcCCC
Q 017793 253 MGSGIDVSFDCVGF 266 (366)
Q Consensus 253 ~~~~~d~vld~~g~ 266 (366)
..+.+|+++.+.|.
T Consensus 90 ~~~~iD~li~nAG~ 103 (313)
T PRK05854 90 EGRPIHLLINNAGV 103 (313)
T ss_pred hCCCccEEEECCcc
Confidence 23579999998874
No 398
>PF13659 Methyltransf_26: Methyltransferase domain; PDB: 3GJY_A 3LPM_B 2NP6_D 1AQI_B 2ADM_B 2IH2_A 2JG3_A 2IBS_D 2NP7_A 2IBT_A ....
Probab=93.94 E-value=0.16 Score=38.55 Aligned_cols=95 Identities=23% Similarity=0.311 Sum_probs=57.8
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc-eeeecCCCCcchHHHHHHHHHhhCCCCc
Q 017793 184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGAD-ETAKVSTDIEDVDTDVGKIQNAMGSGID 258 (366)
Q Consensus 184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d 258 (366)
|.+||-.|+|. |..++.+++.. ...+++++.+++..+.++. .+.+ .+..+. .++.+.... .....+|
T Consensus 1 g~~vlD~~~G~-G~~~~~~~~~~-~~~~~gvdi~~~~~~~a~~~~~~~~~~~~~~~~~---~D~~~~~~~---~~~~~~D 72 (117)
T PF13659_consen 1 GDRVLDPGCGS-GTFLLAALRRG-AARVTGVDIDPEAVELARRNLPRNGLDDRVEVIV---GDARDLPEP---LPDGKFD 72 (117)
T ss_dssp TEEEEEETSTT-CHHHHHHHHHC-TCEEEEEESSHHHHHHHHHHCHHCTTTTTEEEEE---SHHHHHHHT---CTTT-EE
T ss_pred CCEEEEcCcch-HHHHHHHHHHC-CCeEEEEEECHHHHHHHHHHHHHccCCceEEEEE---Cchhhchhh---ccCceeE
Confidence 56788887654 66666666665 4589999999998887765 2321 111111 233222211 1257899
Q ss_pred EEEEcCCCh--------------HHHHHHHHhhcCCceEEEE
Q 017793 259 VSFDCVGFD--------------KTMSTALNATRPGGKVCLI 286 (366)
Q Consensus 259 ~vld~~g~~--------------~~~~~~~~~l~~~G~~v~~ 286 (366)
+|+-+..-. ..+..+.+.|+++|.++.+
T Consensus 73 ~Iv~npP~~~~~~~~~~~~~~~~~~~~~~~~~L~~gG~~~~~ 114 (117)
T PF13659_consen 73 LIVTNPPYGPRSGDKAALRRLYSRFLEAAARLLKPGGVLVFI 114 (117)
T ss_dssp EEEE--STTSBTT----GGCHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEECCCCccccccchhhHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 998754321 3467888999999998765
No 399
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=93.93 E-value=0.68 Score=40.05 Aligned_cols=81 Identities=22% Similarity=0.298 Sum_probs=50.4
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCcee---eecCCCCcchHHHHHHHHHhhC
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADET---AKVSTDIEDVDTDVGKIQNAMG 254 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~~---~~~~~~~~~~~~~~~~~~~~~~ 254 (366)
++.++||.| +|.+|...++.+...|. .|+.+.+++++.+.+ ++.+.... .|. .+...+...+.++... -
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~-~ 80 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGA-KVVIYDSNEEAAEALAAELRAAGGEARVLVFDV-SDEAAVRALIEAAVEA-F 80 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCceEEEEccC-CCHHHHHHHHHHHHHH-h
Confidence 356899998 69999999988888899 578887877664432 23343221 122 2223334444443321 2
Q ss_pred CCCcEEEEcCCC
Q 017793 255 SGIDVSFDCVGF 266 (366)
Q Consensus 255 ~~~d~vld~~g~ 266 (366)
..+|.++.+.|.
T Consensus 81 ~~id~vi~~ag~ 92 (246)
T PRK05653 81 GALDILVNNAGI 92 (246)
T ss_pred CCCCEEEECCCc
Confidence 468999998865
No 400
>PRK08264 short chain dehydrogenase; Validated
Probab=93.93 E-value=0.52 Score=40.78 Aligned_cols=78 Identities=21% Similarity=0.290 Sum_probs=46.6
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEE
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF 261 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl 261 (366)
.+.++||.| +|.+|...++.+...|.++|+.+.++.++.+. .+... .....+-.+.. .+.++.+. -..+|++|
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~-~~~~~D~~~~~-~~~~~~~~-~~~id~vi 78 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRV-VPLQLDVTDPA-SVAAAAEA-ASDVTILV 78 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCce-EEEEecCCCHH-HHHHHHHh-cCCCCEEE
Confidence 457899998 69999998888888898567777777665432 22221 11111111111 22222221 24589999
Q ss_pred EcCCC
Q 017793 262 DCVGF 266 (366)
Q Consensus 262 d~~g~ 266 (366)
.+.|.
T Consensus 79 ~~ag~ 83 (238)
T PRK08264 79 NNAGI 83 (238)
T ss_pred ECCCc
Confidence 99886
No 401
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.92 E-value=0.67 Score=41.26 Aligned_cols=82 Identities=24% Similarity=0.327 Sum_probs=47.6
Q ss_pred CCCEEEEECC---CHHHHHHHHHHHHCCCCeEEEEcCCh---hHHH-HHHHcCCceeeecC-CCCcchHHHHHHHHHhhC
Q 017793 183 PETNVMIMGS---GPIGLVTLLAARAFGAPRIIITDVDV---QRLS-IARNLGADETAKVS-TDIEDVDTDVGKIQNAMG 254 (366)
Q Consensus 183 ~~~~vlI~G~---g~vG~~ai~la~~~g~~~vv~v~~~~---~~~~-~~~~lg~~~~~~~~-~~~~~~~~~~~~~~~~~~ 254 (366)
.+.++||.|+ +++|.+.++.+...|+ +|+.+.+++ ++.+ +.++++....+..+ ++.++..+.+.++.+. -
T Consensus 9 ~~k~~lItGas~~~GIG~aia~~la~~G~-~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~ 86 (272)
T PRK08159 9 AGKRGLILGVANNRSIAWGIAKACRAAGA-ELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKK-W 86 (272)
T ss_pred cCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHh-c
Confidence 4678999985 5899998888878899 566665553 2322 22344532222111 2223344444443322 3
Q ss_pred CCCcEEEEcCCC
Q 017793 255 SGIDVSFDCVGF 266 (366)
Q Consensus 255 ~~~d~vld~~g~ 266 (366)
+.+|+++.+.|.
T Consensus 87 g~iD~lv~nAG~ 98 (272)
T PRK08159 87 GKLDFVVHAIGF 98 (272)
T ss_pred CCCcEEEECCcc
Confidence 479999999863
No 402
>KOG3010 consensus Methyltransferase [General function prediction only]
Probab=93.92 E-value=0.11 Score=44.53 Aligned_cols=102 Identities=16% Similarity=0.167 Sum_probs=61.4
Q ss_pred CCCCCCCEEEE-ECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCC
Q 017793 179 ANVGPETNVMI-MGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGI 257 (366)
Q Consensus 179 ~~~~~~~~vlI-~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (366)
+...++.++++ .|+|. |++++-++-. .+.||++|.+++-++.+++.......+ +...-....+..+.. +...+
T Consensus 28 a~~~~~h~~a~DvG~G~-Gqa~~~iae~--~k~VIatD~s~~mL~~a~k~~~~~y~~--t~~~ms~~~~v~L~g-~e~SV 101 (261)
T KOG3010|consen 28 ASRTEGHRLAWDVGTGN-GQAARGIAEH--YKEVIATDVSEAMLKVAKKHPPVTYCH--TPSTMSSDEMVDLLG-GEESV 101 (261)
T ss_pred HhhCCCcceEEEeccCC-CcchHHHHHh--hhhheeecCCHHHHHHhhcCCCccccc--CCccccccccccccC-CCcce
Confidence 55677777544 47776 7888888876 457999999999999988754333221 111111111122221 24567
Q ss_pred cEEEEcCC-----ChHHHHHHHHhhcCCceEEEE
Q 017793 258 DVSFDCVG-----FDKTMSTALNATRPGGKVCLI 286 (366)
Q Consensus 258 d~vld~~g-----~~~~~~~~~~~l~~~G~~v~~ 286 (366)
|+|+.+-. -+...+.+-+.|++.|.++.+
T Consensus 102 DlI~~Aqa~HWFdle~fy~~~~rvLRk~Gg~iav 135 (261)
T KOG3010|consen 102 DLITAAQAVHWFDLERFYKEAYRVLRKDGGLIAV 135 (261)
T ss_pred eeehhhhhHHhhchHHHHHHHHHHcCCCCCEEEE
Confidence 88765322 134667788899888855543
No 403
>PRK13304 L-aspartate dehydrogenase; Reviewed
Probab=93.91 E-value=0.82 Score=40.59 Aligned_cols=86 Identities=15% Similarity=0.259 Sum_probs=54.0
Q ss_pred EEEEECCCHHHHHHHHHHHHC--CCCeEEEEcCChhHHHHH-HHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793 186 NVMIMGSGPIGLVTLLAARAF--GAPRIIITDVDVQRLSIA-RNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD 262 (366)
Q Consensus 186 ~vlI~G~g~vG~~ai~la~~~--g~~~vv~v~~~~~~~~~~-~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld 262 (366)
+|.|+|+|.+|...++..... +.+.+.+++++.++.+.+ ++++... + .++ .++. ..+|+|++
T Consensus 3 rIgIIG~G~iG~~ia~~l~~~~~~~elv~v~d~~~~~a~~~a~~~~~~~---~----~~~----~ell----~~~DvVvi 67 (265)
T PRK13304 3 KIGIVGCGAIASLITKAILSGRINAELYAFYDRNLEKAENLASKTGAKA---C----LSI----DELV----EDVDLVVE 67 (265)
T ss_pred EEEEECccHHHHHHHHHHHcCCCCeEEEEEECCCHHHHHHHHHhcCCee---E----CCH----HHHh----cCCCEEEE
Confidence 688999999998776665544 454455677777665543 4444321 1 122 2221 35899999
Q ss_pred cCCChHHHHHHHHhhcCCceEEEE
Q 017793 263 CVGFDKTMSTALNATRPGGKVCLI 286 (366)
Q Consensus 263 ~~g~~~~~~~~~~~l~~~G~~v~~ 286 (366)
|.+...+.+.....|..+-.++..
T Consensus 68 ~a~~~~~~~~~~~al~~Gk~Vvv~ 91 (265)
T PRK13304 68 CASVNAVEEVVPKSLENGKDVIIM 91 (265)
T ss_pred cCChHHHHHHHHHHHHcCCCEEEE
Confidence 988776667777777765555443
No 404
>PRK09291 short chain dehydrogenase; Provisional
Probab=93.91 E-value=0.39 Score=42.10 Aligned_cols=77 Identities=18% Similarity=0.222 Sum_probs=46.1
Q ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCceeeecCCCCcchHHHHHHHHHhhCCCCc
Q 017793 184 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR----NLGADETAKVSTDIEDVDTDVGKIQNAMGSGID 258 (366)
Q Consensus 184 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 258 (366)
+.++||.| +|.+|...++.+...|+ .|+++.+++++.+.+. ..+..... +..+-.+.. .+.... ..++|
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~D~~~~~-~~~~~~---~~~id 75 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGH-NVIAGVQIAPQVTALRAEAARRGLALRV-EKLDLTDAI-DRAQAA---EWDVD 75 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceE-EEeeCCCHH-HHHHHh---cCCCC
Confidence 35799998 69999999999888998 6777767665544332 22322111 111112221 222221 34799
Q ss_pred EEEEcCCC
Q 017793 259 VSFDCVGF 266 (366)
Q Consensus 259 ~vld~~g~ 266 (366)
++|.+.|.
T Consensus 76 ~vi~~ag~ 83 (257)
T PRK09291 76 VLLNNAGI 83 (257)
T ss_pred EEEECCCc
Confidence 99999873
No 405
>PRK13303 L-aspartate dehydrogenase; Provisional
Probab=93.90 E-value=0.7 Score=41.02 Aligned_cols=88 Identities=18% Similarity=0.229 Sum_probs=52.0
Q ss_pred EEEEECCCHHHHHHHHHHHHC-CCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcC
Q 017793 186 NVMIMGSGPIGLVTLLAARAF-GAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCV 264 (366)
Q Consensus 186 ~vlI~G~g~vG~~ai~la~~~-g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~ 264 (366)
+|.|+|+|.+|...++..... +.+.+.++............++.. +..+ .+ +.++ ...+|+|++|.
T Consensus 3 rVgIiG~G~iG~~~~~~l~~~~~~~l~~v~~~~~~~~~~~~~~~~~-~~~~----~d----~~~l----~~~~DvVve~t 69 (265)
T PRK13303 3 KVAMIGFGAIGAAVLELLEHDPDLRVDWVIVPEHSIDAVRRALGEA-VRVV----SS----VDAL----PQRPDLVVECA 69 (265)
T ss_pred EEEEECCCHHHHHHHHHHhhCCCceEEEEEEcCCCHHHHhhhhccC-Ceee----CC----HHHh----ccCCCEEEECC
Confidence 689999999998877766654 453333333322222222223211 1111 11 1122 24689999999
Q ss_pred CChHHHHHHHHhhcCCceEEEE
Q 017793 265 GFDKTMSTALNATRPGGKVCLI 286 (366)
Q Consensus 265 g~~~~~~~~~~~l~~~G~~v~~ 286 (366)
+...+.+....+|..|-.++..
T Consensus 70 ~~~~~~e~~~~aL~aGk~Vvi~ 91 (265)
T PRK13303 70 GHAALKEHVVPILKAGIDCAVI 91 (265)
T ss_pred CHHHHHHHHHHHHHcCCCEEEe
Confidence 9887878888888887666653
No 406
>PRK12746 short chain dehydrogenase; Provisional
Probab=93.90 E-value=1.8 Score=37.70 Aligned_cols=82 Identities=22% Similarity=0.289 Sum_probs=46.1
Q ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHH-HHHHc---CCce-ee--ecCCCCcchHHHHHHHHHhh--
Q 017793 184 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNL---GADE-TA--KVSTDIEDVDTDVGKIQNAM-- 253 (366)
Q Consensus 184 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~l---g~~~-~~--~~~~~~~~~~~~~~~~~~~~-- 253 (366)
+.+++|.| +|.+|...++.+...|...++...++.++.+ .+.++ +... .+ |. ++..++...+.++....
T Consensus 6 ~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-~d~~~i~~~~~~~~~~~~~ 84 (254)
T PRK12746 6 GKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADL-NSIDGVKKLVEQLKNELQI 84 (254)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCc-CCHHHHHHHHHHHHHHhcc
Confidence 57899998 6999999888887789843333455555433 22222 2211 11 22 12223333333332211
Q ss_pred ---CCCCcEEEEcCCC
Q 017793 254 ---GSGIDVSFDCVGF 266 (366)
Q Consensus 254 ---~~~~d~vld~~g~ 266 (366)
..++|++|.+.|.
T Consensus 85 ~~~~~~id~vi~~ag~ 100 (254)
T PRK12746 85 RVGTSEIDILVNNAGI 100 (254)
T ss_pred ccCCCCccEEEECCCC
Confidence 1469999998875
No 407
>PRK13302 putative L-aspartate dehydrogenase; Provisional
Probab=93.89 E-value=0.72 Score=41.11 Aligned_cols=88 Identities=17% Similarity=0.154 Sum_probs=56.8
Q ss_pred CEEEEECCCHHHHHHHHHHHH--CCCCeEEEEcCChhHHH-HHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEE
Q 017793 185 TNVMIMGSGPIGLVTLLAARA--FGAPRIIITDVDVQRLS-IARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF 261 (366)
Q Consensus 185 ~~vlI~G~g~vG~~ai~la~~--~g~~~vv~v~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl 261 (366)
-+|.|+|+|.+|....+.+.. -+.+.+.+.++++++.+ ++++++..... .++ .++. ...|+|+
T Consensus 7 irIGIIG~G~IG~~~a~~L~~~~~~~el~aV~dr~~~~a~~~a~~~g~~~~~------~~~----eell----~~~D~Vv 72 (271)
T PRK13302 7 LRVAIAGLGAIGKAIAQALDRGLPGLTLSAVAVRDPQRHADFIWGLRRPPPV------VPL----DQLA----THADIVV 72 (271)
T ss_pred eEEEEECccHHHHHHHHHHHhcCCCeEEEEEECCCHHHHHHHHHhcCCCccc------CCH----HHHh----cCCCEEE
Confidence 578999999999876666554 36644445667766654 45556632211 122 2222 2479999
Q ss_pred EcCCChHHHHHHHHhhcCCceEEEE
Q 017793 262 DCVGFDKTMSTALNATRPGGKVCLI 286 (366)
Q Consensus 262 d~~g~~~~~~~~~~~l~~~G~~v~~ 286 (366)
.|.+...+.+.....|+.+-.++..
T Consensus 73 i~tp~~~h~e~~~~aL~aGk~Vi~~ 97 (271)
T PRK13302 73 EAAPASVLRAIVEPVLAAGKKAIVL 97 (271)
T ss_pred ECCCcHHHHHHHHHHHHcCCcEEEe
Confidence 9999887777777788777666543
No 408
>PRK08263 short chain dehydrogenase; Provisional
Probab=93.88 E-value=0.6 Score=41.52 Aligned_cols=81 Identities=23% Similarity=0.218 Sum_probs=48.3
Q ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCce-eeecC-CCCcchHHHHHHHHHhhCCCCcE
Q 017793 184 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-LGADE-TAKVS-TDIEDVDTDVGKIQNAMGSGIDV 259 (366)
Q Consensus 184 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~d~ 259 (366)
+.++||.| +|.+|...++.+...|. .|+.+++++++.+.+.+ ++... .+..+ ++..++...+.++.. .-+++|.
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~~d~ 80 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGD-RVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVE-HFGRLDI 80 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHH-HcCCCCE
Confidence 35799998 69999988888777898 67777777766554433 32211 11111 122233333333322 1347899
Q ss_pred EEEcCCC
Q 017793 260 SFDCVGF 266 (366)
Q Consensus 260 vld~~g~ 266 (366)
++.+.|.
T Consensus 81 vi~~ag~ 87 (275)
T PRK08263 81 VVNNAGY 87 (275)
T ss_pred EEECCCC
Confidence 9999875
No 409
>COG0334 GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism]
Probab=93.87 E-value=1.1 Score=41.78 Aligned_cols=45 Identities=16% Similarity=0.197 Sum_probs=34.6
Q ss_pred HHHHhCCC-CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChh
Q 017793 174 HACRRANV-GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQ 219 (366)
Q Consensus 174 ~~l~~~~~-~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~ 219 (366)
.+++.... -+|.+|.|.|.|.+|+.+++.+...|+ ++++++-++.
T Consensus 196 ~a~~~~g~~l~G~rVaVQG~GNVg~~aa~~l~~~GA-kvva~sds~g 241 (411)
T COG0334 196 EALKALGDDLEGARVAVQGFGNVGQYAAEKLHELGA-KVVAVSDSKG 241 (411)
T ss_pred HHHHHcCCCcCCCEEEEECccHHHHHHHHHHHHcCC-EEEEEEcCCC
Confidence 44444443 379999999999999999999998899 5666654444
No 410
>TIGR02992 ectoine_eutC ectoine utilization protein EutC. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).
Probab=93.86 E-value=1.3 Score=40.71 Aligned_cols=94 Identities=21% Similarity=0.238 Sum_probs=60.1
Q ss_pred CCCCEEEEECCCHHHHHHHHHHH-HCCCCeEEEEcCChhHHH-HHHHc----CCceeeecCCCCcchHHHHHHHHHhhCC
Q 017793 182 GPETNVMIMGSGPIGLVTLLAAR-AFGAPRIIITDVDVQRLS-IARNL----GADETAKVSTDIEDVDTDVGKIQNAMGS 255 (366)
Q Consensus 182 ~~~~~vlI~G~g~vG~~ai~la~-~~g~~~vv~v~~~~~~~~-~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (366)
+...+++|+|+|..|.+.+..+. ..+++++.+..++.++.+ +++++ +.+ +..+ .+..+.+ .
T Consensus 127 ~~~~~v~iiGaG~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~-v~~~----~~~~~av--------~ 193 (326)
T TIGR02992 127 EDSSVVAIFGAGMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGID-VTAA----TDPRAAM--------S 193 (326)
T ss_pred CCCcEEEEECCCHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCce-EEEe----CCHHHHh--------c
Confidence 45578999999999977766665 578778888888887765 44444 322 1111 1222221 4
Q ss_pred CCcEEEEcCCChHHHHHHHHhhcCCceEEEEccc
Q 017793 256 GIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLA 289 (366)
Q Consensus 256 ~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~ 289 (366)
.+|+|+.|.+....+ ...+.++++-.+..+|..
T Consensus 194 ~aDiVvtaT~s~~p~-i~~~~l~~g~~i~~vg~~ 226 (326)
T TIGR02992 194 GADIIVTTTPSETPI-LHAEWLEPGQHVTAMGSD 226 (326)
T ss_pred cCCEEEEecCCCCcE-ecHHHcCCCcEEEeeCCC
Confidence 699999998764311 122467888888778744
No 411
>PRK07074 short chain dehydrogenase; Provisional
Probab=93.85 E-value=0.64 Score=40.78 Aligned_cols=81 Identities=22% Similarity=0.322 Sum_probs=47.7
Q ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHH-HHHcCCcee--eecC-CCCcchHHHHHHHHHhhCCCCc
Q 017793 184 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARNLGADET--AKVS-TDIEDVDTDVGKIQNAMGSGID 258 (366)
Q Consensus 184 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~lg~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~d 258 (366)
+.++||.| +|.+|...+..+...|+ .|+.++++.++.+. .+++....+ +..+ .+...+...+.+... .-+++|
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~~d 79 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGD-RVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAA-ERGPVD 79 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH-HcCCCC
Confidence 45799998 58999988887777898 67777777766543 333321111 1111 111222233333322 124699
Q ss_pred EEEEcCCC
Q 017793 259 VSFDCVGF 266 (366)
Q Consensus 259 ~vld~~g~ 266 (366)
+++.+.|.
T Consensus 80 ~vi~~ag~ 87 (257)
T PRK07074 80 VLVANAGA 87 (257)
T ss_pred EEEECCCC
Confidence 99999874
No 412
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=93.84 E-value=1.8 Score=33.66 Aligned_cols=95 Identities=17% Similarity=0.262 Sum_probs=55.6
Q ss_pred EEEEC-CCHHHHHHHHHHHHCC--CCeEEEEcCCh--hH-HHHHHHcCCceeeecCCCCcchHHHHHHHH----------
Q 017793 187 VMIMG-SGPIGLVTLLAARAFG--APRIIITDVDV--QR-LSIARNLGADETAKVSTDIEDVDTDVGKIQ---------- 250 (366)
Q Consensus 187 vlI~G-~g~vG~~ai~la~~~g--~~~vv~v~~~~--~~-~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~---------- 250 (366)
|.|.| +|++|..++.+.+... + +|++..... +. .+++++|.+..+...+. .....+++..
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f-~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~---~~~~~l~~~~~~~~~~~~v~ 76 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKF-EVVALSAGSNIEKLAEQAREFKPKYVVIADE---EAYEELKKALPSKGPGIEVL 76 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTE-EEEEEEESSTHHHHHHHHHHHT-SEEEESSH---HHHHHHHHHHHHTTSSSEEE
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCce-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCH---HHHHHHHHHhhhcCCCCEEE
Confidence 57889 6999999999999886 5 455553332 22 34667788776655332 1122222211
Q ss_pred -------Hhh-CCCCcEEEEcCCChHHHHHHHHhhcCCceEEE
Q 017793 251 -------NAM-GSGIDVSFDCVGFDKTMSTALNATRPGGKVCL 285 (366)
Q Consensus 251 -------~~~-~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~ 285 (366)
+.. ...+|+|+.++.+-..+...+..++.+=++.+
T Consensus 77 ~G~~~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~gk~iaL 119 (129)
T PF02670_consen 77 SGPEGLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAGKDIAL 119 (129)
T ss_dssp ESHHHHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTTSEEEE
T ss_pred eChHHHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCCCeEEE
Confidence 111 25688888887777677777777776655443
No 413
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=93.84 E-value=0.2 Score=45.03 Aligned_cols=42 Identities=29% Similarity=0.381 Sum_probs=36.6
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH
Q 017793 183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA 224 (366)
Q Consensus 183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~ 224 (366)
.+.+++|+|+|++|.+++..+...|+.++..++++.+|.+.+
T Consensus 126 ~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~l 167 (284)
T PRK12549 126 SLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAAL 167 (284)
T ss_pred cCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH
Confidence 467899999999999999999999998899999988877644
No 414
>PTZ00079 NADP-specific glutamate dehydrogenase; Provisional
Probab=93.83 E-value=1.8 Score=41.25 Aligned_cols=34 Identities=24% Similarity=0.481 Sum_probs=29.4
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCeEE-EEcCC
Q 017793 183 PETNVMIMGSGPIGLVTLLAARAFGAPRII-ITDVD 217 (366)
Q Consensus 183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv-~v~~~ 217 (366)
.|.+|+|.|.|.+|..+++.+...|+ +|+ +.|++
T Consensus 236 ~Gk~VaVqG~GnVg~~aa~~L~e~Ga-kVVavSD~~ 270 (454)
T PTZ00079 236 EGKTVVVSGSGNVAQYAVEKLLQLGA-KVLTMSDSD 270 (454)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEEcCC
Confidence 68899999999999999999999999 566 55555
No 415
>PRK07035 short chain dehydrogenase; Provisional
Probab=93.79 E-value=0.79 Score=40.04 Aligned_cols=80 Identities=15% Similarity=0.254 Sum_probs=49.2
Q ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HH---cCCce-ee--ecCCCCcchHHHHHHHHHhhCC
Q 017793 184 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RN---LGADE-TA--KVSTDIEDVDTDVGKIQNAMGS 255 (366)
Q Consensus 184 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~---lg~~~-~~--~~~~~~~~~~~~~~~~~~~~~~ 255 (366)
+.++||.| +|.+|...++.+...|+ .|+.++++.++.+.+ ++ .+... .+ |+ .+..+....+.+..+. -+
T Consensus 8 ~k~vlItGas~gIG~~l~~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~-~~ 84 (252)
T PRK07035 8 GKIALVTGASRGIGEAIAKLLAQQGA-HVIVSSRKLDGCQAVADAIVAAGGKAEALACHI-GEMEQIDALFAHIRER-HG 84 (252)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCC-CCHHHHHHHHHHHHHH-cC
Confidence 56899998 69999999988888898 688887776654433 22 23211 11 22 2222333333333322 24
Q ss_pred CCcEEEEcCCC
Q 017793 256 GIDVSFDCVGF 266 (366)
Q Consensus 256 ~~d~vld~~g~ 266 (366)
.+|+++.+.|.
T Consensus 85 ~id~li~~ag~ 95 (252)
T PRK07035 85 RLDILVNNAAA 95 (252)
T ss_pred CCCEEEECCCc
Confidence 69999998873
No 416
>PRK07063 short chain dehydrogenase; Provisional
Probab=93.78 E-value=0.73 Score=40.50 Aligned_cols=81 Identities=23% Similarity=0.278 Sum_probs=49.9
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCC----cee----eecCCCCcchHHHHHHHHHh
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGA----DET----AKVSTDIEDVDTDVGKIQNA 252 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~----~~~----~~~~~~~~~~~~~~~~~~~~ 252 (366)
.+.++||.| +|++|...++.+...|+ .|+.+++++++.+.+ +++.. ..+ .|. ++..++...+.++.+.
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-~~~~~~~~~~~~~~~~ 83 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGA-AVALADLDAALAERAAAAIARDVAGARVLAVPADV-TDAASVAAAVAAAEEA 83 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccC-CCHHHHHHHHHHHHHH
Confidence 367899998 68999998888888899 677777777655433 22211 111 122 2223333444443332
Q ss_pred hCCCCcEEEEcCCC
Q 017793 253 MGSGIDVSFDCVGF 266 (366)
Q Consensus 253 ~~~~~d~vld~~g~ 266 (366)
-+.+|+++.+.|.
T Consensus 84 -~g~id~li~~ag~ 96 (260)
T PRK07063 84 -FGPLDVLVNNAGI 96 (260)
T ss_pred -hCCCcEEEECCCc
Confidence 3479999999874
No 417
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=93.77 E-value=0.76 Score=40.90 Aligned_cols=81 Identities=19% Similarity=0.262 Sum_probs=48.3
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHH-HHH---cCCce-eeecC-CCCcchHHHHHHHHHhhCC
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARN---LGADE-TAKVS-TDIEDVDTDVGKIQNAMGS 255 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~---lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~ 255 (366)
.+.+++|.| +|++|.+.++.+...|+ .|+.+++++++.+. .++ .+... .+..+ .+..+....+.++... -+
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~g 86 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGA-KVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILED-FG 86 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-cC
Confidence 367899998 69999998888888899 67777777655432 222 23221 11111 1122233333333221 25
Q ss_pred CCcEEEEcCC
Q 017793 256 GIDVSFDCVG 265 (366)
Q Consensus 256 ~~d~vld~~g 265 (366)
.+|+++.+.|
T Consensus 87 ~id~li~~ag 96 (278)
T PRK08277 87 PCDILINGAG 96 (278)
T ss_pred CCCEEEECCC
Confidence 7999999987
No 418
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=93.75 E-value=0.88 Score=42.49 Aligned_cols=34 Identities=24% Similarity=0.484 Sum_probs=30.4
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCC
Q 017793 184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD 217 (366)
Q Consensus 184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~ 217 (366)
..+|||.|+|++|..+++.+.+.|+..+..+|.+
T Consensus 41 ~~~VliiG~GglG~~v~~~La~~Gvg~i~ivD~D 74 (370)
T PRK05600 41 NARVLVIGAGGLGCPAMQSLASAGVGTITLIDDD 74 (370)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 5789999999999999999999999888888754
No 419
>KOG3201 consensus Uncharacterized conserved protein [Function unknown]
Probab=93.75 E-value=0.27 Score=39.42 Aligned_cols=113 Identities=17% Similarity=0.201 Sum_probs=73.0
Q ss_pred HHHHHHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc-------CCceeeecCCCCcchH
Q 017793 171 VGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL-------GADETAKVSTDIEDVD 243 (366)
Q Consensus 171 ~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l-------g~~~~~~~~~~~~~~~ 243 (366)
.||..++.-+.=.|.+|+-.|+|-.|++.+.+|...--..|..++.+++..+-+++. +.+.+.... +.
T Consensus 17 la~~~l~~~n~~rg~~ilelgggft~laglmia~~a~~~~v~ltdgne~svrnv~ki~~~n~~s~~tsc~vlr-----w~ 91 (201)
T KOG3201|consen 17 LAWTILRDPNKIRGRRILELGGGFTGLAGLMIACKAPDSSVWLTDGNEESVRNVEKIRNSNMASSLTSCCVLR-----WL 91 (201)
T ss_pred HHHHHHhchhHHhHHHHHHhcCchhhhhhhheeeecCCceEEEecCCHHHHHHHHHHHhcccccccceehhhH-----HH
Confidence 466667654444567888899999999999999988777899999999877766553 222221110 10
Q ss_pred HHHHHHHHhhCCCCcEEEE--cCCCh----HHHHHHHHhhcCCceEEEEccc
Q 017793 244 TDVGKIQNAMGSGIDVSFD--CVGFD----KTMSTALNATRPGGKVCLIGLA 289 (366)
Q Consensus 244 ~~~~~~~~~~~~~~d~vld--~~g~~----~~~~~~~~~l~~~G~~v~~g~~ 289 (366)
..-.+. ......||+++. |.-.. +.+..++.+|+|.|+-+.+...
T Consensus 92 ~~~aqs-q~eq~tFDiIlaADClFfdE~h~sLvdtIk~lL~p~g~Al~fsPR 142 (201)
T KOG3201|consen 92 IWGAQS-QQEQHTFDIILAADCLFFDEHHESLVDTIKSLLRPSGRALLFSPR 142 (201)
T ss_pred HhhhHH-HHhhCcccEEEeccchhHHHHHHHHHHHHHHHhCcccceeEecCc
Confidence 000011 112468999975 44333 3566677889999997666433
No 420
>PRK07985 oxidoreductase; Provisional
Probab=93.74 E-value=1.8 Score=38.97 Aligned_cols=104 Identities=15% Similarity=0.166 Sum_probs=59.2
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCC--hhHHHHH----HHcCCce-e--eecCCCCcchHHHHHHHHHh
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVD--VQRLSIA----RNLGADE-T--AKVSTDIEDVDTDVGKIQNA 252 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~--~~~~~~~----~~lg~~~-~--~~~~~~~~~~~~~~~~~~~~ 252 (366)
.+.++||.| +|++|.+.++.+...|+ .|+.+.++ .++.+.+ ++.+... . .|. ++.++..+.+.++.+.
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~G~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-~~~~~~~~~~~~~~~~ 125 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYAREGA-DVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDL-SDEKFARSLVHEAHKA 125 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccC-CCHHHHHHHHHHHHHH
Confidence 457899998 68999998888888899 56665433 2222222 2333321 1 122 2223333444443332
Q ss_pred hCCCCcEEEEcCCCh--------------------------HHHHHHHHhhcCCceEEEEccc
Q 017793 253 MGSGIDVSFDCVGFD--------------------------KTMSTALNATRPGGKVCLIGLA 289 (366)
Q Consensus 253 ~~~~~d~vld~~g~~--------------------------~~~~~~~~~l~~~G~~v~~g~~ 289 (366)
-+++|+++.+.|.. ...+.+...+..+|+++.++..
T Consensus 126 -~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~ 187 (294)
T PRK07985 126 -LGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSI 187 (294)
T ss_pred -hCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCc
Confidence 35799999987631 0222344455677888887643
No 421
>PRK14968 putative methyltransferase; Provisional
Probab=93.74 E-value=1 Score=37.37 Aligned_cols=42 Identities=24% Similarity=0.499 Sum_probs=32.8
Q ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH
Q 017793 181 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR 225 (366)
Q Consensus 181 ~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~ 225 (366)
..+++++|..|+|. |..+..+++. +. .+++++.+++..+.++
T Consensus 21 ~~~~~~vLd~G~G~-G~~~~~l~~~-~~-~v~~~D~s~~~~~~a~ 62 (188)
T PRK14968 21 DKKGDRVLEVGTGS-GIVAIVAAKN-GK-KVVGVDINPYAVECAK 62 (188)
T ss_pred ccCCCEEEEEcccc-CHHHHHHHhh-cc-eEEEEECCHHHHHHHH
Confidence 36788999998765 6677788876 65 7999999988776654
No 422
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=93.74 E-value=0.75 Score=40.38 Aligned_cols=81 Identities=12% Similarity=0.189 Sum_probs=47.9
Q ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HH----cCCceeeecC---CCCcchHHHHHHHHHhhC
Q 017793 184 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RN----LGADETAKVS---TDIEDVDTDVGKIQNAMG 254 (366)
Q Consensus 184 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~----lg~~~~~~~~---~~~~~~~~~~~~~~~~~~ 254 (366)
+.++||.| +|.+|...+..+...|+ .++.++++.++.+.+ .+ .+...+..+. ++..+....+.++... -
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~-~ 79 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGY-RVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEI-F 79 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHH-c
Confidence 46799998 68999988888888898 677777776554322 22 2212222111 1222333333333322 2
Q ss_pred CCCcEEEEcCCC
Q 017793 255 SGIDVSFDCVGF 266 (366)
Q Consensus 255 ~~~d~vld~~g~ 266 (366)
+++|+++.+.|.
T Consensus 80 ~~id~vv~~ag~ 91 (259)
T PRK12384 80 GRVDLLVYNAGI 91 (259)
T ss_pred CCCCEEEECCCc
Confidence 579999999874
No 423
>PRK06179 short chain dehydrogenase; Provisional
Probab=93.74 E-value=0.36 Score=42.74 Aligned_cols=78 Identities=24% Similarity=0.271 Sum_probs=48.4
Q ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCce-eeecCCCCcchHHHHHHHHHhhCCCCcEEE
Q 017793 184 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE-TAKVSTDIEDVDTDVGKIQNAMGSGIDVSF 261 (366)
Q Consensus 184 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl 261 (366)
+.+++|.| +|.+|...++.+...|+ .|++++++.++.+... +... ..|+ ++..++...+..+.+. -+.+|++|
T Consensus 4 ~~~vlVtGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~--~~~~~~~D~-~d~~~~~~~~~~~~~~-~g~~d~li 78 (270)
T PRK06179 4 SKVALVTGASSGIGRATAEKLARAGY-RVFGTSRNPARAAPIP--GVELLELDV-TDDASVQAAVDEVIAR-AGRIDVLV 78 (270)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCChhhccccC--CCeeEEeec-CCHHHHHHHHHHHHHh-CCCCCEEE
Confidence 46799998 69999988888777898 6777777665543211 2221 1222 2333444444444332 34699999
Q ss_pred EcCCC
Q 017793 262 DCVGF 266 (366)
Q Consensus 262 d~~g~ 266 (366)
.+.|.
T Consensus 79 ~~ag~ 83 (270)
T PRK06179 79 NNAGV 83 (270)
T ss_pred ECCCC
Confidence 99985
No 424
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.73 E-value=0.75 Score=40.70 Aligned_cols=80 Identities=15% Similarity=0.203 Sum_probs=46.3
Q ss_pred CCCEEEEECCC---HHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc----CCcee--eecCCCCcchHHHHHHHHHhh
Q 017793 183 PETNVMIMGSG---PIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GADET--AKVSTDIEDVDTDVGKIQNAM 253 (366)
Q Consensus 183 ~~~~vlI~G~g---~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~~~--~~~~~~~~~~~~~~~~~~~~~ 253 (366)
.+.++||.|++ ++|.+.++.+...|+ .|+.++++++..+.++++ +.... .|. ++..+..+.+.++.+.
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~-~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl-~~~~~v~~~~~~~~~~- 81 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDV-AEDASIDAMFAELGKV- 81 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCC-EEEEEecchhHHHHHHHHHhccCCceEeecCC-CCHHHHHHHHHHHHhh-
Confidence 46789999853 799987777777898 566666653222233332 21111 222 2233444444444332
Q ss_pred CCCCcEEEEcCC
Q 017793 254 GSGIDVSFDCVG 265 (366)
Q Consensus 254 ~~~~d~vld~~g 265 (366)
-+.+|+++++.|
T Consensus 82 ~g~iD~linnAg 93 (262)
T PRK07984 82 WPKFDGFVHSIG 93 (262)
T ss_pred cCCCCEEEECCc
Confidence 246999999987
No 425
>COG0623 FabI Enoyl-[acyl-carrier-protein]
Probab=93.73 E-value=2.1 Score=36.66 Aligned_cols=107 Identities=20% Similarity=0.216 Sum_probs=66.8
Q ss_pred CCCCEEEEEC-C--CHHHHHHHHHHHHCCCCeEEEEcCChh---H-HHHHHHcCCceeeecCC-CCcchHHHHHHHHHhh
Q 017793 182 GPETNVMIMG-S--GPIGLVTLLAARAFGAPRIIITDVDVQ---R-LSIARNLGADETAKVST-DIEDVDTDVGKIQNAM 253 (366)
Q Consensus 182 ~~~~~vlI~G-~--g~vG~~ai~la~~~g~~~vv~v~~~~~---~-~~~~~~lg~~~~~~~~~-~~~~~~~~~~~~~~~~ 253 (366)
-.|.+.||.| + -+++.-..+.++..|++ .+.+--.++ | .+++++++.+.++..+- +.+...+.-.++. ..
T Consensus 4 L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAe-L~fTy~~e~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~-~~ 81 (259)
T COG0623 4 LEGKRILIMGVANNRSIAWGIAKALAEQGAE-LAFTYQGERLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIK-KK 81 (259)
T ss_pred cCCceEEEEEecccccHHHHHHHHHHHcCCE-EEEEeccHHHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHH-Hh
Confidence 3689999998 5 47888888999999995 444433332 2 35667788766544332 2233333322332 23
Q ss_pred CCCCcEEEEcCCCh-----------------------------HHHHHHHHhhcCCceEEEEcccC
Q 017793 254 GSGIDVSFDCVGFD-----------------------------KTMSTALNATRPGGKVCLIGLAK 290 (366)
Q Consensus 254 ~~~~d~vld~~g~~-----------------------------~~~~~~~~~l~~~G~~v~~g~~~ 290 (366)
.+++|.++.|++.. +....+...|.+||-++.+...+
T Consensus 82 ~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtYlg 147 (259)
T COG0623 82 WGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTYLG 147 (259)
T ss_pred hCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEecc
Confidence 56899999888653 13344556778889888765433
No 426
>PRK06141 ornithine cyclodeaminase; Validated
Probab=93.72 E-value=2.3 Score=38.76 Aligned_cols=97 Identities=15% Similarity=0.183 Sum_probs=59.4
Q ss_pred CCCCCEEEEECCCHHHHHHHHHHH-HCCCCeEEEEcCChhHHH-HHHHcCCc--eeeecCCCCcchHHHHHHHHHhhCCC
Q 017793 181 VGPETNVMIMGSGPIGLVTLLAAR-AFGAPRIIITDVDVQRLS-IARNLGAD--ETAKVSTDIEDVDTDVGKIQNAMGSG 256 (366)
Q Consensus 181 ~~~~~~vlI~G~g~vG~~ai~la~-~~g~~~vv~v~~~~~~~~-~~~~lg~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (366)
-+...+++|+|+|..|...+..+. ..+...|.+.++++++.+ +++++... .+... .+. .+. -..
T Consensus 122 ~~~~~~v~iiG~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~~~~~----~~~----~~a----v~~ 189 (314)
T PRK06141 122 RKDASRLLVVGTGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFDAEVV----TDL----EAA----VRQ 189 (314)
T ss_pred CCCCceEEEECCcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEe----CCH----HHH----Hhc
Confidence 356788999999999988875444 467778888888888755 44444211 11111 111 111 146
Q ss_pred CcEEEEcCCChHHHHHHHHhhcCCceEEEEcccC
Q 017793 257 IDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK 290 (366)
Q Consensus 257 ~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 290 (366)
+|+|+.+.+....+ .-.+.++++-.+..+|...
T Consensus 190 aDIVi~aT~s~~pv-l~~~~l~~g~~i~~ig~~~ 222 (314)
T PRK06141 190 ADIISCATLSTEPL-VRGEWLKPGTHLDLVGNFT 222 (314)
T ss_pred CCEEEEeeCCCCCE-ecHHHcCCCCEEEeeCCCC
Confidence 99999988765221 1125678887766676443
No 427
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=93.71 E-value=0.56 Score=47.11 Aligned_cols=93 Identities=15% Similarity=0.185 Sum_probs=64.1
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEc
Q 017793 184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDC 263 (366)
Q Consensus 184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~ 263 (366)
.++|+|.|.|.+|+...+.++..|. .+++++.++++.+.+++.|...++- +..++ +. +.+.+-..+|.++-+
T Consensus 400 ~~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~G-Dat~~---~~---L~~agi~~A~~vvv~ 471 (621)
T PRK03562 400 QPRVIIAGFGRFGQIVGRLLLSSGV-KMTVLDHDPDHIETLRKFGMKVFYG-DATRM---DL---LESAGAAKAEVLINA 471 (621)
T ss_pred cCcEEEEecChHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhcCCeEEEE-eCCCH---HH---HHhcCCCcCCEEEEE
Confidence 3679999999999999999999998 6999999999999999988654322 22111 12 222245679999999
Q ss_pred CCChHHHHH---HHHhhcCCceEE
Q 017793 264 VGFDKTMST---ALNATRPGGKVC 284 (366)
Q Consensus 264 ~g~~~~~~~---~~~~l~~~G~~v 284 (366)
.+.++.-.. ..+.+.|+-+++
T Consensus 472 ~~d~~~n~~i~~~ar~~~p~~~ii 495 (621)
T PRK03562 472 IDDPQTSLQLVELVKEHFPHLQII 495 (621)
T ss_pred eCCHHHHHHHHHHHHHhCCCCeEE
Confidence 987543222 233344554443
No 428
>PRK11579 putative oxidoreductase; Provisional
Probab=93.71 E-value=2.7 Score=38.88 Aligned_cols=130 Identities=15% Similarity=0.111 Sum_probs=73.9
Q ss_pred CEEEEECCCHHHH-HHHH-HHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793 185 TNVMIMGSGPIGL-VTLL-AARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD 262 (366)
Q Consensus 185 ~~vlI~G~g~vG~-~ai~-la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld 262 (366)
=+|.|+|+|.+|. .... +.+.-+++.+.+++.++++.. ++++.... | .++. ++.+ ...+|+|+.
T Consensus 5 irvgiiG~G~i~~~~~~~~~~~~~~~~l~av~d~~~~~~~--~~~~~~~~--~----~~~~----ell~--~~~vD~V~I 70 (346)
T PRK11579 5 IRVGLIGYGYASKTFHAPLIAGTPGLELAAVSSSDATKVK--ADWPTVTV--V----SEPQ----HLFN--DPNIDLIVI 70 (346)
T ss_pred ceEEEECCCHHHHHHHHHHHhhCCCCEEEEEECCCHHHHH--hhCCCCce--e----CCHH----HHhc--CCCCCEEEE
Confidence 3789999999986 3344 444446744455565555432 33432211 1 1332 2332 357999999
Q ss_pred cCCChHHHHHHHHhhcCCceEEEEcccCCCceeech----HhhhcCcEEEEe--eccCCChHHHHHHHHCCCC
Q 017793 263 CVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALT----PAAAREVDVIGI--FRYRSTWPLCIEFLRSGKI 329 (366)
Q Consensus 263 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~----~~~~~~~~~~~~--~~~~~~~~~~~~~l~~g~~ 329 (366)
|++...+...+..+|..|=. +++.-+.....-... ..-..++.+.-. ..+...++.+-+++++|.+
T Consensus 71 ~tp~~~H~~~~~~al~aGkh-Vl~EKPla~t~~ea~~l~~~a~~~g~~l~v~~~~R~~p~~~~~k~~i~~g~i 142 (346)
T PRK11579 71 PTPNDTHFPLAKAALEAGKH-VVVDKPFTVTLSQARELDALAKSAGRVLSVFHNRRWDSDFLTLKALLAEGVL 142 (346)
T ss_pred cCCcHHHHHHHHHHHHCCCe-EEEeCCCCCCHHHHHHHHHHHHHhCCEEEEEeeccCCHHHHHHHHHHhcCCC
Confidence 99998888899888877544 455422211111111 112233333322 2335678889999999887
No 429
>PRK08226 short chain dehydrogenase; Provisional
Probab=93.69 E-value=0.85 Score=40.14 Aligned_cols=81 Identities=22% Similarity=0.299 Sum_probs=49.4
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc---CCce-e--eecCCCCcchHHHHHHHHHhhCC
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL---GADE-T--AKVSTDIEDVDTDVGKIQNAMGS 255 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l---g~~~-~--~~~~~~~~~~~~~~~~~~~~~~~ 255 (366)
.+.++||.| +|.+|...++.+...|+ .|+.++++++..+.++++ +... . .|+ ++..+....+.++... .+
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl-~~~~~v~~~~~~~~~~-~~ 81 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGA-NLILLDISPEIEKLADELCGRGHRCTAVVADV-RDPASVAAAIKRAKEK-EG 81 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhCCceEEEECCC-CCHHHHHHHHHHHHHH-cC
Confidence 367899998 69999998888888899 678887776544433332 3221 1 122 1222333333333322 35
Q ss_pred CCcEEEEcCCC
Q 017793 256 GIDVSFDCVGF 266 (366)
Q Consensus 256 ~~d~vld~~g~ 266 (366)
.+|++|.+.|.
T Consensus 82 ~id~vi~~ag~ 92 (263)
T PRK08226 82 RIDILVNNAGV 92 (263)
T ss_pred CCCEEEECCCc
Confidence 69999998884
No 430
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=93.69 E-value=0.85 Score=39.91 Aligned_cols=82 Identities=27% Similarity=0.471 Sum_probs=49.4
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHH-HHHc---CCce-eeecC-CCCcchHHHHHHHHHhhCC
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARNL---GADE-TAKVS-TDIEDVDTDVGKIQNAMGS 255 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~l---g~~~-~~~~~-~~~~~~~~~~~~~~~~~~~ 255 (366)
.+.++||.| +|++|...++.+...|+ .++.+++++++.+. ..++ +... .+..+ .+...+.+.+.++.+ ..+
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~-~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-~~~ 85 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGA-EIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEK-DIG 85 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHH-hcC
Confidence 367899998 68999998888888898 67777777665432 2222 3221 11111 222233333333332 235
Q ss_pred CCcEEEEcCCC
Q 017793 256 GIDVSFDCVGF 266 (366)
Q Consensus 256 ~~d~vld~~g~ 266 (366)
++|+++.+.|.
T Consensus 86 ~id~vi~~ag~ 96 (254)
T PRK08085 86 PIDVLINNAGI 96 (254)
T ss_pred CCCEEEECCCc
Confidence 79999999874
No 431
>PRK11761 cysM cysteine synthase B; Provisional
Probab=93.67 E-value=2.8 Score=37.84 Aligned_cols=60 Identities=22% Similarity=0.283 Sum_probs=45.4
Q ss_pred HHHhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEc--CChhHHHHHHHcCCceeee
Q 017793 175 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITD--VDVQRLSIARNLGADETAK 234 (366)
Q Consensus 175 ~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~--~~~~~~~~~~~lg~~~~~~ 234 (366)
+.+...++++++|+...+|..|++....|+.+|.+.++.+. .+++|.+.++.+|++.+..
T Consensus 54 a~~~g~~~~g~~vv~aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~~ 115 (296)
T PRK11761 54 AEKRGEIKPGDTLIEATSGNTGIALAMIAAIKGYRMKLIMPENMSQERRAAMRAYGAELILV 115 (296)
T ss_pred HHHcCCCCCCCEEEEeCCChHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEe
Confidence 33456667788776666899999999999999997666664 3457888999999876543
No 432
>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated
Probab=93.67 E-value=0.69 Score=43.62 Aligned_cols=34 Identities=32% Similarity=0.521 Sum_probs=29.7
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCC
Q 017793 184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD 217 (366)
Q Consensus 184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~ 217 (366)
..+|||+|+|++|..++..+.+.|...+..+|.+
T Consensus 42 ~~~VlviG~GGlGs~va~~La~~Gvg~i~lvD~D 75 (392)
T PRK07878 42 NARVLVIGAGGLGSPTLLYLAAAGVGTLGIVEFD 75 (392)
T ss_pred cCCEEEECCCHHHHHHHHHHHHcCCCeEEEECCC
Confidence 5689999999999999999999999888888643
No 433
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=93.65 E-value=0.63 Score=40.46 Aligned_cols=81 Identities=20% Similarity=0.220 Sum_probs=46.7
Q ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChh-HHHHHH---HcCCcee---eecCCCCcchHHHHHHHHHhhCC
Q 017793 184 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQ-RLSIAR---NLGADET---AKVSTDIEDVDTDVGKIQNAMGS 255 (366)
Q Consensus 184 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~-~~~~~~---~lg~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 255 (366)
+.++||.| +|.+|...++.+...|++.++...+++. +.+.++ +.+.... .|. .+..+..+.+.++.+. .+
T Consensus 3 ~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~-~~ 80 (246)
T PRK12938 3 QRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNV-GDWDSTKAAFDKVKAE-VG 80 (246)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCC-CCHHHHHHHHHHHHHH-hC
Confidence 56789998 6999999888888889953433433332 323333 3343322 122 2223333334443332 35
Q ss_pred CCcEEEEcCCC
Q 017793 256 GIDVSFDCVGF 266 (366)
Q Consensus 256 ~~d~vld~~g~ 266 (366)
++|+++.+.|.
T Consensus 81 ~id~li~~ag~ 91 (246)
T PRK12938 81 EIDVLVNNAGI 91 (246)
T ss_pred CCCEEEECCCC
Confidence 79999999875
No 434
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=93.65 E-value=0.86 Score=39.84 Aligned_cols=81 Identities=25% Similarity=0.401 Sum_probs=49.1
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHc---CCce-e--eecCCCCcchHHHHHHHHHhhC
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL---GADE-T--AKVSTDIEDVDTDVGKIQNAMG 254 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l---g~~~-~--~~~~~~~~~~~~~~~~~~~~~~ 254 (366)
++.++||.| +|.+|...++.+...|. .|+.+++++++.+.+ .++ +... . .|. .+..+..+.+..+... .
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl-~~~~~~~~~~~~~~~~-~ 79 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGA-KVVIADLNDEAAAAAAEALQKAGGKAIGVAMDV-TDEEAINAGIDYAVET-F 79 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCC-CCHHHHHHHHHHHHHH-c
Confidence 357899998 69999998888777898 677777777654432 222 3221 1 122 2223333333333322 3
Q ss_pred CCCcEEEEcCCC
Q 017793 255 SGIDVSFDCVGF 266 (366)
Q Consensus 255 ~~~d~vld~~g~ 266 (366)
+++|++|.+.+.
T Consensus 80 ~~~d~vi~~a~~ 91 (258)
T PRK12429 80 GGVDILVNNAGI 91 (258)
T ss_pred CCCCEEEECCCC
Confidence 479999998863
No 435
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=93.65 E-value=0.86 Score=40.02 Aligned_cols=82 Identities=21% Similarity=0.195 Sum_probs=48.1
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHH---HHHHcCCce-eeecC-CCCcchHHHHHHHHHhhCCC
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS---IARNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGSG 256 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~---~~~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~ 256 (366)
.+.++||.| +|++|...++.+...|+ .++.+.++++..+ .+.+.+... .+..+ ++.......+.++.+. .++
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~-~g~ 91 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGA-DIIITTHGTNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEE-FGK 91 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH-cCC
Confidence 468999998 68999998888888899 5666655532112 223334321 11111 2223333344444332 357
Q ss_pred CcEEEEcCCC
Q 017793 257 IDVSFDCVGF 266 (366)
Q Consensus 257 ~d~vld~~g~ 266 (366)
+|+++.+.|.
T Consensus 92 id~li~~ag~ 101 (258)
T PRK06935 92 IDILVNNAGT 101 (258)
T ss_pred CCEEEECCCC
Confidence 9999998874
No 436
>smart00846 Gp_dh_N Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain. GAPDH is a tetrameric NAD-binding enzyme involved in glycolysis and glyconeogenesis. N-terminal domain is a Rossmann NAD(P) binding fold.
Probab=93.64 E-value=0.64 Score=37.28 Aligned_cols=105 Identities=25% Similarity=0.283 Sum_probs=58.3
Q ss_pred EEEEECCCHHHHHHHHHHHH-CCCCeEEEEc-CChhHHHHHHH----cCCc-eeeecCCC----Cc---ch--HHHHHHH
Q 017793 186 NVMIMGSGPIGLVTLLAARA-FGAPRIIITD-VDVQRLSIARN----LGAD-ETAKVSTD----IE---DV--DTDVGKI 249 (366)
Q Consensus 186 ~vlI~G~g~vG~~ai~la~~-~g~~~vv~v~-~~~~~~~~~~~----lg~~-~~~~~~~~----~~---~~--~~~~~~~ 249 (366)
+|.|+|.|.+|...++.+.. .+++.+.+.+ .+.+...++-+ .|.- ..+..... +. .+ .....++
T Consensus 2 kv~I~G~GriGr~v~~~~~~~~~~~lvai~d~~~~~~~a~ll~~Ds~hg~~~~~v~~~~~~l~i~g~~i~~~~~~~p~~~ 81 (149)
T smart00846 2 KVGINGFGRIGRLVLRALLERPDIEVVAINDLTDPETLAHLLKYDSVHGRFPGEVEVDEDGLIVNGKKIKVLAERDPANL 81 (149)
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCEEEEeecCCCHHHHHHHhcccCCCCCCCCcEEEeCCEEEECCEEEEEEecCChHHC
Confidence 58899999999988887774 4664444455 34555555543 2210 00000000 00 00 0111112
Q ss_pred HHhhCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccCC
Q 017793 250 QNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT 291 (366)
Q Consensus 250 ~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 291 (366)
.+ ...++|+|+||.|.-...+.+..+|..|.+-+.++.+..
T Consensus 82 ~w-~~~gvDiVie~tG~f~~~~~~~~hl~~GakkViisap~~ 122 (149)
T smart00846 82 PW-KELGVDIVVECTGKFTTREKASAHLKAGAKKVIISAPAK 122 (149)
T ss_pred cc-cccCCeEEEeccccccchHHHHHHHHcCCCEEEeCCCCC
Confidence 11 245899999998864455666678888877777765543
No 437
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=93.64 E-value=0.88 Score=39.57 Aligned_cols=82 Identities=22% Similarity=0.322 Sum_probs=48.9
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCce-eeecCC-CCcchHHHHHHHHHhhCC
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR----NLGADE-TAKVST-DIEDVDTDVGKIQNAMGS 255 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~----~lg~~~-~~~~~~-~~~~~~~~~~~~~~~~~~ 255 (366)
++.++||.| +|.+|...++.+...|. .|+.++++.++...+. +.+... .+..+- +.....+.+..+.+. -+
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~-~~ 79 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGA-KVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQA-LG 79 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH-cC
Confidence 367899998 69999998888888898 6777777766544332 222221 112111 122333333333321 34
Q ss_pred CCcEEEEcCCC
Q 017793 256 GIDVSFDCVGF 266 (366)
Q Consensus 256 ~~d~vld~~g~ 266 (366)
++|++|.+.|.
T Consensus 80 ~~d~vi~~ag~ 90 (250)
T TIGR03206 80 PVDVLVNNAGW 90 (250)
T ss_pred CCCEEEECCCC
Confidence 78999999873
No 438
>PRK06482 short chain dehydrogenase; Provisional
Probab=93.63 E-value=0.85 Score=40.50 Aligned_cols=79 Identities=24% Similarity=0.186 Sum_probs=48.3
Q ss_pred CEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCce-e--eecCCCCcchHHHHHHHHHhhCCCCcE
Q 017793 185 TNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-LGADE-T--AKVSTDIEDVDTDVGKIQNAMGSGIDV 259 (366)
Q Consensus 185 ~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~d~ 259 (366)
.++||.| +|.+|...++.+...|. .|+++.+++++.+.+++ ++... . .|. ++.....+.+.++.+ ...++|+
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~-~~~~id~ 79 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGD-RVAATVRRPDALDDLKARYGDRLWVLQLDV-TDSAAVRAVVDRAFA-ALGRIDV 79 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCceEEEEccC-CCHHHHHHHHHHHHH-HcCCCCE
Confidence 4789998 69999998887777898 67777788776655543 22211 1 121 112223333333222 1357899
Q ss_pred EEEcCCC
Q 017793 260 SFDCVGF 266 (366)
Q Consensus 260 vld~~g~ 266 (366)
+|.+.|.
T Consensus 80 vi~~ag~ 86 (276)
T PRK06482 80 VVSNAGY 86 (276)
T ss_pred EEECCCC
Confidence 9999874
No 439
>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates. This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C.
Probab=93.63 E-value=1.2 Score=36.06 Aligned_cols=88 Identities=17% Similarity=0.189 Sum_probs=55.7
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793 183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD 262 (366)
Q Consensus 183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld 262 (366)
++.+|.|+|-|.-|.+-.+-+|-.|.+.+++........+.+++-|.... +..+.+ ...|+|+-
T Consensus 3 ~~k~IAViGyGsQG~a~AlNLrDSG~~V~Vglr~~s~s~~~A~~~Gf~v~--------~~~eAv--------~~aDvV~~ 66 (165)
T PF07991_consen 3 KGKTIAVIGYGSQGHAHALNLRDSGVNVIVGLREGSASWEKAKADGFEVM--------SVAEAV--------KKADVVML 66 (165)
T ss_dssp CTSEEEEES-SHHHHHHHHHHHHCC-EEEEEE-TTCHHHHHHHHTT-ECC--------EHHHHH--------HC-SEEEE
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCCCEEEEecCCCcCHHHHHHCCCeec--------cHHHHH--------hhCCEEEE
Confidence 46899999988889999999999999777777666668888898887531 222222 25899998
Q ss_pred cCCChH---HH-HHHHHhhcCCceEEEE
Q 017793 263 CVGFDK---TM-STALNATRPGGKVCLI 286 (366)
Q Consensus 263 ~~g~~~---~~-~~~~~~l~~~G~~v~~ 286 (366)
.++... .+ +.....|+++-.+++.
T Consensus 67 L~PD~~q~~vy~~~I~p~l~~G~~L~fa 94 (165)
T PF07991_consen 67 LLPDEVQPEVYEEEIAPNLKPGATLVFA 94 (165)
T ss_dssp -S-HHHHHHHHHHHHHHHS-TT-EEEES
T ss_pred eCChHHHHHHHHHHHHhhCCCCCEEEeC
Confidence 887431 22 3444577888776653
No 440
>PRK05876 short chain dehydrogenase; Provisional
Probab=93.63 E-value=0.59 Score=41.67 Aligned_cols=81 Identities=28% Similarity=0.349 Sum_probs=49.2
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHH-HHH---cCCce-e--eecCCCCcchHHHHHHHHHhhC
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARN---LGADE-T--AKVSTDIEDVDTDVGKIQNAMG 254 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~---lg~~~-~--~~~~~~~~~~~~~~~~~~~~~~ 254 (366)
.+.++||.| +|++|.+.+..+...|+ .|+.+++++++.+. .++ .+... . .|. ++..++.+.+.+..+. -
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv-~d~~~v~~~~~~~~~~-~ 81 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGA-RVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDV-RHREEVTHLADEAFRL-L 81 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCC-CCHHHHHHHHHHHHHH-c
Confidence 367899998 69999998888888899 57777777655442 222 23321 1 122 2223333333333322 3
Q ss_pred CCCcEEEEcCCC
Q 017793 255 SGIDVSFDCVGF 266 (366)
Q Consensus 255 ~~~d~vld~~g~ 266 (366)
+.+|+++.+.|.
T Consensus 82 g~id~li~nAg~ 93 (275)
T PRK05876 82 GHVDVVFSNAGI 93 (275)
T ss_pred CCCCEEEECCCc
Confidence 469999999874
No 441
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=93.61 E-value=2 Score=39.53 Aligned_cols=88 Identities=19% Similarity=0.171 Sum_probs=57.9
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793 183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD 262 (366)
Q Consensus 183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld 262 (366)
.|.+|.|+|.|.+|....+.++..|. +|++.+++.+..... . .+. .+ +.++. ...|+|+.
T Consensus 145 ~g~~VgIIG~G~IG~~vA~~L~~~G~-~V~~~d~~~~~~~~~----~----~~~---~~----l~ell----~~aDiVil 204 (330)
T PRK12480 145 KNMTVAIIGTGRIGAATAKIYAGFGA-TITAYDAYPNKDLDF----L----TYK---DS----VKEAI----KDADIISL 204 (330)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCChhHhhhh----h----hcc---CC----HHHHH----hcCCEEEE
Confidence 46789999999999999999999999 788888776542210 0 010 12 22222 36899998
Q ss_pred cCCChHH-----HHHHHHhhcCCceEEEEcccC
Q 017793 263 CVGFDKT-----MSTALNATRPGGKVCLIGLAK 290 (366)
Q Consensus 263 ~~g~~~~-----~~~~~~~l~~~G~~v~~g~~~ 290 (366)
+++.... -...+..|+++..++.++...
T Consensus 205 ~lP~t~~t~~li~~~~l~~mk~gavlIN~aRG~ 237 (330)
T PRK12480 205 HVPANKESYHLFDKAMFDHVKKGAILVNAARGA 237 (330)
T ss_pred eCCCcHHHHHHHhHHHHhcCCCCcEEEEcCCcc
Confidence 8876431 223556778888777765433
No 442
>PLN03013 cysteine synthase
Probab=93.59 E-value=2.7 Score=39.94 Aligned_cols=57 Identities=19% Similarity=0.336 Sum_probs=44.3
Q ss_pred HhCCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEc--CChhHHHHHHHcCCceee
Q 017793 177 RRANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITD--VDVQRLSIARNLGADETA 233 (366)
Q Consensus 177 ~~~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~--~~~~~~~~~~~lg~~~~~ 233 (366)
+++.+++|.+.+|.. +|..|++....++.+|.+.++++. .++++.+.++.+|++.+.
T Consensus 167 ~~G~l~pG~~~VVeaSSGN~G~ALA~~a~~~G~~~~VvvP~~~s~~K~~~ira~GAeVi~ 226 (429)
T PLN03013 167 QKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVL 226 (429)
T ss_pred HcCCcCCCCcEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHcCCEEEE
Confidence 556778886666665 799999999999999996555553 356788899999987654
No 443
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.59 E-value=0.45 Score=42.56 Aligned_cols=84 Identities=14% Similarity=0.202 Sum_probs=56.9
Q ss_pred HHHhCCC-CCCCEEEEECCCH-HHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHh
Q 017793 175 ACRRANV-GPETNVMIMGSGP-IGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNA 252 (366)
Q Consensus 175 ~l~~~~~-~~~~~vlI~G~g~-vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~ 252 (366)
.++..++ -.|.+++|+|+|. +|....+++...|+ .|..+.+..+ + +.+.
T Consensus 149 ~L~~~~i~l~Gk~vvViG~gg~vGkpia~~L~~~ga-tVtv~~~~t~---------------------~----L~~~--- 199 (283)
T PRK14192 149 LLKAYNIELAGKHAVVVGRSAILGKPMAMMLLNANA-TVTICHSRTQ---------------------N----LPEL--- 199 (283)
T ss_pred HHHHcCCCCCCCEEEEECCcHHHHHHHHHHHHhCCC-EEEEEeCCch---------------------h----HHHH---
Confidence 3444443 4688999999876 99999999999999 6666643111 1 1111
Q ss_pred hCCCCcEEEEcCCChHHHHHHHHhhcCCceEEEEcccC
Q 017793 253 MGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK 290 (366)
Q Consensus 253 ~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 290 (366)
-..+|+++.++|.+..+. .+.++++..++.+|...
T Consensus 200 -~~~aDIvI~AtG~~~~v~--~~~lk~gavViDvg~n~ 234 (283)
T PRK14192 200 -VKQADIIVGAVGKPELIK--KDWIKQGAVVVDAGFHP 234 (283)
T ss_pred -hccCCEEEEccCCCCcCC--HHHcCCCCEEEEEEEee
Confidence 146899999998665332 35688888888887544
No 444
>KOG0069 consensus Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily) [Energy production and conversion]
Probab=93.59 E-value=1.1 Score=40.79 Aligned_cols=88 Identities=19% Similarity=0.197 Sum_probs=61.2
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEE-E
Q 017793 183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS-F 261 (366)
Q Consensus 183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v-l 261 (366)
.|.+|.|+|.|.+|+...+-++..| ..+....+...+.+...+.++.. .++.+.+ ...|++ +
T Consensus 161 ~gK~vgilG~G~IG~~ia~rL~~Fg-~~i~y~~r~~~~~~~~~~~~~~~--------~d~~~~~--------~~sD~ivv 223 (336)
T KOG0069|consen 161 EGKTVGILGLGRIGKAIAKRLKPFG-CVILYHSRTQLPPEEAYEYYAEF--------VDIEELL--------ANSDVIVV 223 (336)
T ss_pred cCCEEEEecCcHHHHHHHHhhhhcc-ceeeeecccCCchhhHHHhcccc--------cCHHHHH--------hhCCEEEE
Confidence 5789999999999999999999988 57777777777777766666641 1222222 245665 5
Q ss_pred EcCCChHHHH----HHHHhhcCCceEEEEc
Q 017793 262 DCVGFDKTMS----TALNATRPGGKVCLIG 287 (366)
Q Consensus 262 d~~g~~~~~~----~~~~~l~~~G~~v~~g 287 (366)
+|..++.+.+ ..+..|++++.++-++
T Consensus 224 ~~pLt~~T~~liNk~~~~~mk~g~vlVN~a 253 (336)
T KOG0069|consen 224 NCPLTKETRHLINKKFIEKMKDGAVLVNTA 253 (336)
T ss_pred ecCCCHHHHHHhhHHHHHhcCCCeEEEecc
Confidence 5655554332 3667889998877654
No 445
>TIGR00452 methyltransferase, putative. Known examples to date are restricted to the proteobacteria.
Probab=93.58 E-value=0.96 Score=41.15 Aligned_cols=100 Identities=16% Similarity=0.148 Sum_probs=61.0
Q ss_pred HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHH---HHHHc-CCceeeecCCCCcchHHHHHHHHHh
Q 017793 177 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLS---IARNL-GADETAKVSTDIEDVDTDVGKIQNA 252 (366)
Q Consensus 177 ~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~---~~~~l-g~~~~~~~~~~~~~~~~~~~~~~~~ 252 (366)
......+|++||-+|||. |..+..+++. |+..|++++.++.-.. .++++ +....+.+.. .+ +.++..
T Consensus 115 ~~l~~~~g~~VLDvGCG~-G~~~~~~~~~-g~~~v~GiDpS~~ml~q~~~~~~~~~~~~~v~~~~--~~----ie~lp~- 185 (314)
T TIGR00452 115 PHLSPLKGRTILDVGCGS-GYHMWRMLGH-GAKSLVGIDPTVLFLCQFEAVRKLLDNDKRAILEP--LG----IEQLHE- 185 (314)
T ss_pred HhcCCCCCCEEEEeccCC-cHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHHHHHhccCCCeEEEE--CC----HHHCCC-
Confidence 344567789999999887 7777777764 7767999999886433 23332 2111111101 11 112211
Q ss_pred hCCCCcEEEEcC-----CC-hHHHHHHHHhhcCCceEEEE
Q 017793 253 MGSGIDVSFDCV-----GF-DKTMSTALNATRPGGKVCLI 286 (366)
Q Consensus 253 ~~~~~d~vld~~-----g~-~~~~~~~~~~l~~~G~~v~~ 286 (366)
...||+|+..- .. ...+..+.+.|++||++++.
T Consensus 186 -~~~FD~V~s~gvL~H~~dp~~~L~el~r~LkpGG~Lvle 224 (314)
T TIGR00452 186 -LYAFDTVFSMGVLYHRKSPLEHLKQLKHQLVIKGELVLE 224 (314)
T ss_pred -CCCcCEEEEcchhhccCCHHHHHHHHHHhcCCCCEEEEE
Confidence 23699997542 12 25788888999999999864
No 446
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=93.56 E-value=1 Score=38.05 Aligned_cols=92 Identities=20% Similarity=0.180 Sum_probs=55.2
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCCh-------------------hH----HHHHHHcCCceeeecCCCCc
Q 017793 184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV-------------------QR----LSIARNLGADETAKVSTDIE 240 (366)
Q Consensus 184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~-------------------~~----~~~~~~lg~~~~~~~~~~~~ 240 (366)
..+|+|.|+|++|...+..+-..|+..+..+|.+. .| .+.++++..+..+.....
T Consensus 21 ~s~VlIiG~gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~~~-- 98 (197)
T cd01492 21 SARILLIGLKGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVDTD-- 98 (197)
T ss_pred hCcEEEEcCCHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEEec--
Confidence 57899999999999999999999998888886442 01 223455555443322111
Q ss_pred chHHHHHHHHHhhCCCCcEEEEcCCChHHHHHHHHhhcCCc
Q 017793 241 DVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGG 281 (366)
Q Consensus 241 ~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G 281 (366)
.+.+...+. -.++|+|++|..........-+.+...+
T Consensus 99 ~~~~~~~~~----~~~~dvVi~~~~~~~~~~~ln~~c~~~~ 135 (197)
T cd01492 99 DISEKPEEF----FSQFDVVVATELSRAELVKINELCRKLG 135 (197)
T ss_pred CccccHHHH----HhCCCEEEECCCCHHHHHHHHHHHHHcC
Confidence 111111112 2579999999876544333334444333
No 447
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....
Probab=93.56 E-value=0.79 Score=38.26 Aligned_cols=75 Identities=24% Similarity=0.279 Sum_probs=43.5
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhh-----------C
Q 017793 186 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM-----------G 254 (366)
Q Consensus 186 ~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~-----------~ 254 (366)
+|-|+|.|=+|+.....+...|. .|++++.++++.+.+.+ |-..+ .++...+.+++....+ -
T Consensus 2 ~I~ViGlGyvGl~~A~~lA~~G~-~V~g~D~~~~~v~~l~~-g~~p~-----~E~~l~~ll~~~~~~~~l~~t~~~~~ai 74 (185)
T PF03721_consen 2 KIAVIGLGYVGLPLAAALAEKGH-QVIGVDIDEEKVEALNN-GELPI-----YEPGLDELLKENVSAGRLRATTDIEEAI 74 (185)
T ss_dssp EEEEE--STTHHHHHHHHHHTTS-EEEEE-S-HHHHHHHHT-TSSSS------CTTHHHHHHHHHHTTSEEEESEHHHHH
T ss_pred EEEEECCCcchHHHHHHHHhCCC-EEEEEeCChHHHHHHhh-ccccc-----cccchhhhhccccccccchhhhhhhhhh
Confidence 68899999999887777777898 89999999999888765 32111 1244444444433100 1
Q ss_pred CCCcEEEEcCCCh
Q 017793 255 SGIDVSFDCVGFD 267 (366)
Q Consensus 255 ~~~d~vld~~g~~ 267 (366)
...|++|-|++++
T Consensus 75 ~~adv~~I~VpTP 87 (185)
T PF03721_consen 75 KDADVVFICVPTP 87 (185)
T ss_dssp HH-SEEEE----E
T ss_pred hccceEEEecCCC
Confidence 3589999999876
No 448
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=93.56 E-value=0.071 Score=42.80 Aligned_cols=94 Identities=15% Similarity=0.179 Sum_probs=53.9
Q ss_pred EEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeec----CCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793 187 VMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKV----STDIEDVDTDVGKIQNAMGSGIDVSFD 262 (366)
Q Consensus 187 vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~d~vld 262 (366)
|+|+|+|++|......++..|. .|..+.+.+ +.+.+++-|......- .......... ......+|++|-
T Consensus 1 I~I~G~GaiG~~~a~~L~~~g~-~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~D~viv 73 (151)
T PF02558_consen 1 ILIIGAGAIGSLYAARLAQAGH-DVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAP-----SADAGPYDLVIV 73 (151)
T ss_dssp EEEESTSHHHHHHHHHHHHTTC-EEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSH-----GHHHSTESEEEE
T ss_pred CEEECcCHHHHHHHHHHHHCCC-ceEEEEccc-cHHhhhheeEEEEecccceecccccccCcc-----hhccCCCcEEEE
Confidence 6899999999887777766888 677776766 7777776554221110 0000000000 012468999999
Q ss_pred cCCChH---HHHHHHHhhcCCceEEEEc
Q 017793 263 CVGFDK---TMSTALNATRPGGKVCLIG 287 (366)
Q Consensus 263 ~~g~~~---~~~~~~~~l~~~G~~v~~g 287 (366)
|+-... .++.+...+.++..++.+.
T Consensus 74 ~vKa~~~~~~l~~l~~~~~~~t~iv~~q 101 (151)
T PF02558_consen 74 AVKAYQLEQALQSLKPYLDPNTTIVSLQ 101 (151)
T ss_dssp -SSGGGHHHHHHHHCTGEETTEEEEEES
T ss_pred EecccchHHHHHHHhhccCCCcEEEEEe
Confidence 986543 3333444455666676664
No 449
>PRK09242 tropinone reductase; Provisional
Probab=93.55 E-value=0.97 Score=39.63 Aligned_cols=81 Identities=25% Similarity=0.312 Sum_probs=50.1
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHc-----CCce-e--eecCCCCcchHHHHHHHHHh
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL-----GADE-T--AKVSTDIEDVDTDVGKIQNA 252 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l-----g~~~-~--~~~~~~~~~~~~~~~~~~~~ 252 (366)
.+.++||.| +|.+|...++.+...|+ .|+.++++.++.+.+ .++ +... . .|+ .+..+....+.++...
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl-~~~~~~~~~~~~~~~~ 85 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGA-DVLIVARDADALAQARDELAEEFPEREVHGLAADV-SDDEDRRAILDWVEDH 85 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCC-CCHHHHHHHHHHHHHH
Confidence 367899998 68999999888888899 677777777655433 222 2211 1 122 1222333333333332
Q ss_pred hCCCCcEEEEcCCC
Q 017793 253 MGSGIDVSFDCVGF 266 (366)
Q Consensus 253 ~~~~~d~vld~~g~ 266 (366)
-+++|+++.+.|.
T Consensus 86 -~g~id~li~~ag~ 98 (257)
T PRK09242 86 -WDGLHILVNNAGG 98 (257)
T ss_pred -cCCCCEEEECCCC
Confidence 3579999999985
No 450
>PRK07411 hypothetical protein; Validated
Probab=93.54 E-value=0.67 Score=43.65 Aligned_cols=34 Identities=38% Similarity=0.515 Sum_probs=30.0
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCC
Q 017793 184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD 217 (366)
Q Consensus 184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~ 217 (366)
..+|||.|+|++|..+++.+.+.|+.++..+|.+
T Consensus 38 ~~~VlivG~GGlG~~va~~La~~Gvg~l~lvD~D 71 (390)
T PRK07411 38 AASVLCIGTGGLGSPLLLYLAAAGIGRIGIVDFD 71 (390)
T ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 4689999999999999999999999888888643
No 451
>TIGR00091 tRNA (guanine-N(7)-)-methyltransferase. In E. coli, this protein flanks the DNA repair protein MutY, also called micA.
Probab=93.53 E-value=0.87 Score=38.30 Aligned_cols=98 Identities=14% Similarity=0.146 Sum_probs=61.9
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCceeeecCCCCcchHHHHHHHHHhhCCCCc
Q 017793 183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAMGSGID 258 (366)
Q Consensus 183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 258 (366)
...++|-+|+|. |..+..+++......+++++.+++..+.+++ .+...+.... .+......... ....+|
T Consensus 16 ~~~~ilDiGcG~-G~~~~~la~~~p~~~v~gvD~~~~~l~~a~~~~~~~~l~ni~~i~---~d~~~~~~~~~--~~~~~d 89 (194)
T TIGR00091 16 KAPLHLEIGCGK-GRFLIDMAKQNPDKNFLGIEIHTPIVLAANNKANKLGLKNLHVLC---GDANELLDKFF--PDGSLS 89 (194)
T ss_pred CCceEEEeCCCc-cHHHHHHHHhCCCCCEEEEEeeHHHHHHHHHHHHHhCCCCEEEEc---cCHHHHHHhhC--CCCcee
Confidence 345677789887 8889999987654479999999987665533 3333222111 22222222111 123588
Q ss_pred EEEEcCCC--------------hHHHHHHHHhhcCCceEEEE
Q 017793 259 VSFDCVGF--------------DKTMSTALNATRPGGKVCLI 286 (366)
Q Consensus 259 ~vld~~g~--------------~~~~~~~~~~l~~~G~~v~~ 286 (366)
.++-..+. ...+..+.+.|+++|.+...
T Consensus 90 ~v~~~~pdpw~k~~h~~~r~~~~~~l~~~~r~LkpgG~l~~~ 131 (194)
T TIGR00091 90 KVFLNFPDPWPKKRHNKRRITQPHFLKEYANVLKKGGVIHFK 131 (194)
T ss_pred EEEEECCCcCCCCCccccccCCHHHHHHHHHHhCCCCEEEEE
Confidence 88765443 24678889999999998765
No 452
>PRK06720 hypothetical protein; Provisional
Probab=93.52 E-value=1.5 Score=36.06 Aligned_cols=82 Identities=27% Similarity=0.320 Sum_probs=47.8
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHH-HH---HcCCce-eeecC-CCCcchHHHHHHHHHhhCC
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-AR---NLGADE-TAKVS-TDIEDVDTDVGKIQNAMGS 255 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~---~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~ 255 (366)
++..++|.| ++++|...+..+...|+ .|+.+++++++.+. ++ +.+... .+..+ ++..++.+.+.+..+. -+
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~-~G 92 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGA-KVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNA-FS 92 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-cC
Confidence 467889998 57899988887777898 67777777654432 22 234322 12211 1122333333333221 34
Q ss_pred CCcEEEEcCCC
Q 017793 256 GIDVSFDCVGF 266 (366)
Q Consensus 256 ~~d~vld~~g~ 266 (366)
.+|+++.+.|.
T Consensus 93 ~iDilVnnAG~ 103 (169)
T PRK06720 93 RIDMLFQNAGL 103 (169)
T ss_pred CCCEEEECCCc
Confidence 68999998874
No 453
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=93.52 E-value=0.66 Score=43.85 Aligned_cols=38 Identities=21% Similarity=0.417 Sum_probs=30.3
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHH
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRL 221 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~ 221 (366)
.+.+++|.| +|++|.+.++.+...|+ +|+++++++++.
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~-~Vi~l~r~~~~l 215 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGA-KVVALTSNSDKI 215 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHH
Confidence 367999998 69999998888777898 677777766654
No 454
>PRK13301 putative L-aspartate dehydrogenase; Provisional
Probab=93.51 E-value=0.87 Score=40.02 Aligned_cols=88 Identities=10% Similarity=0.046 Sum_probs=53.7
Q ss_pred CEEEEECCCHHHHHHHHHHHHC---CCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEE
Q 017793 185 TNVMIMGSGPIGLVTLLAARAF---GAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF 261 (366)
Q Consensus 185 ~~vlI~G~g~vG~~ai~la~~~---g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl 261 (366)
.+|.|+|+|.+|...++....- +++.+.+.++..++.+.+.+. +.. + .+ +.++. ....|+|+
T Consensus 3 ~rvgiIG~GaIG~~va~~l~~~~~~~~~l~~V~~~~~~~~~~~~~~-~~~---~----~~----l~~ll---~~~~DlVV 67 (267)
T PRK13301 3 HRIAFIGLGAIASDVAAGLLADAAQPCQLAALTRNAADLPPALAGR-VAL---L----DG----LPGLL---AWRPDLVV 67 (267)
T ss_pred eEEEEECccHHHHHHHHHHhcCCCCceEEEEEecCCHHHHHHhhcc-Ccc---c----CC----HHHHh---hcCCCEEE
Confidence 4788999999999887766542 254444555555454433221 111 1 11 22221 35688999
Q ss_pred EcCCChHHHHHHHHhhcCCceEEEEc
Q 017793 262 DCVGFDKTMSTALNATRPGGKVCLIG 287 (366)
Q Consensus 262 d~~g~~~~~~~~~~~l~~~G~~v~~g 287 (366)
||.+.....+.....|..+-.++..+
T Consensus 68 E~A~~~av~e~~~~iL~~g~dlvv~S 93 (267)
T PRK13301 68 EAAGQQAIAEHAEGCLTAGLDMIICS 93 (267)
T ss_pred ECCCHHHHHHHHHHHHhcCCCEEEEC
Confidence 99887777777777777776666554
No 455
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=93.51 E-value=1.2 Score=44.26 Aligned_cols=75 Identities=12% Similarity=0.122 Sum_probs=55.7
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcC
Q 017793 185 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCV 264 (366)
Q Consensus 185 ~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~ 264 (366)
+.++|.|.|.+|+..++.++..|. .++++|.++++.+.+++.|...+.- +.. + .+.+++ .+-..+|.++-++
T Consensus 418 ~hiiI~G~G~~G~~la~~L~~~g~-~vvvId~d~~~~~~~~~~g~~~i~G-D~~--~-~~~L~~---a~i~~a~~viv~~ 489 (558)
T PRK10669 418 NHALLVGYGRVGSLLGEKLLAAGI-PLVVIETSRTRVDELRERGIRAVLG-NAA--N-EEIMQL---AHLDCARWLLLTI 489 (558)
T ss_pred CCEEEECCChHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHCCCeEEEc-CCC--C-HHHHHh---cCccccCEEEEEc
Confidence 678999999999999999999998 6999999999999999887655432 111 1 222322 2345789888777
Q ss_pred CCh
Q 017793 265 GFD 267 (366)
Q Consensus 265 g~~ 267 (366)
+.+
T Consensus 490 ~~~ 492 (558)
T PRK10669 490 PNG 492 (558)
T ss_pred CCh
Confidence 654
No 456
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=93.49 E-value=0.62 Score=40.65 Aligned_cols=79 Identities=23% Similarity=0.374 Sum_probs=48.7
Q ss_pred CEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCce-e--eecCCCCcchHHHHHHHHHhhCCC
Q 017793 185 TNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADE-T--AKVSTDIEDVDTDVGKIQNAMGSG 256 (366)
Q Consensus 185 ~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~ 256 (366)
.++||.| +|.+|...+..+...|. .|+++++++++.+.+.+ .+... . .|. .+.+++...+.++.+. ..+
T Consensus 2 ~~vlItGa~g~lG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~-~~~ 78 (255)
T TIGR01963 2 KTALVTGAASGIGLAIALALAAAGA-NVVVNDLGEAGAEAAAKVATDAGGSVIYLVADV-TKEDEIADMIAAAAAE-FGG 78 (255)
T ss_pred CEEEEcCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCC-CCHHHHHHHHHHHHHh-cCC
Confidence 4799998 69999998888888898 68888787766554432 22221 1 122 2223333434344322 346
Q ss_pred CcEEEEcCCC
Q 017793 257 IDVSFDCVGF 266 (366)
Q Consensus 257 ~d~vld~~g~ 266 (366)
+|++|.+.+.
T Consensus 79 ~d~vi~~a~~ 88 (255)
T TIGR01963 79 LDILVNNAGI 88 (255)
T ss_pred CCEEEECCCC
Confidence 8999988764
No 457
>PRK13256 thiopurine S-methyltransferase; Reviewed
Probab=93.47 E-value=0.91 Score=39.12 Aligned_cols=100 Identities=11% Similarity=0.122 Sum_probs=62.1
Q ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCc---------------eeeecCCCCcch
Q 017793 179 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-LGAD---------------ETAKVSTDIEDV 242 (366)
Q Consensus 179 ~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~---------------~~~~~~~~~~~~ 242 (366)
....++.+|||-|||. |.-++-||. .|. .|++++-++...+.+.+ .+.. .+-.+. .|+
T Consensus 39 l~~~~~~rvLvPgCGk-g~D~~~LA~-~G~-~V~GvDlS~~Ai~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~---gD~ 112 (226)
T PRK13256 39 LNINDSSVCLIPMCGC-SIDMLFFLS-KGV-KVIGIELSEKAVLSFFSQNTINYEVIHGNDYKLYKGDDIEIYV---ADI 112 (226)
T ss_pred cCCCCCCeEEEeCCCC-hHHHHHHHh-CCC-cEEEEecCHHHHHHHHHHcCCCcceecccccceeccCceEEEE---ccC
Confidence 4445678999999987 777777777 598 69999999988776533 2211 110000 111
Q ss_pred HHHHHHHHH--hhCCCCcEEEEcCCC----h----HHHHHHHHhhcCCceEEEEcc
Q 017793 243 DTDVGKIQN--AMGSGIDVSFDCVGF----D----KTMSTALNATRPGGKVCLIGL 288 (366)
Q Consensus 243 ~~~~~~~~~--~~~~~~d~vld~~g~----~----~~~~~~~~~l~~~G~~v~~g~ 288 (366)
-+ +.. ...+.+|.|+|..-- + .-...+.+.|+++|+++++..
T Consensus 113 f~----l~~~~~~~~~fD~VyDra~~~Alpp~~R~~Y~~~l~~lL~pgg~llll~~ 164 (226)
T PRK13256 113 FN----LPKIANNLPVFDIWYDRGAYIALPNDLRTNYAKMMLEVCSNNTQILLLVM 164 (226)
T ss_pred cC----CCccccccCCcCeeeeehhHhcCCHHHHHHHHHHHHHHhCCCcEEEEEEE
Confidence 11 100 012469999995421 1 245567778999999887653
No 458
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=93.46 E-value=2.1 Score=38.70 Aligned_cols=43 Identities=14% Similarity=0.158 Sum_probs=34.1
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC
Q 017793 186 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA 229 (366)
Q Consensus 186 ~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~ 229 (366)
+|.|+|.|.+|.....-+...|. .|++.++++++.+.+.+.+.
T Consensus 2 ~Ig~IGlG~mG~~la~~L~~~g~-~V~~~dr~~~~~~~l~~~g~ 44 (298)
T TIGR00872 2 QLGLIGLGRMGANIVRRLAKRGH-DCVGYDHDQDAVKAMKEDRT 44 (298)
T ss_pred EEEEEcchHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCC
Confidence 58889999999877776666787 67778899988887776554
No 459
>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]
Probab=93.46 E-value=1.1 Score=35.89 Aligned_cols=96 Identities=20% Similarity=0.260 Sum_probs=60.4
Q ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHH-----hhCCCC
Q 017793 184 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN-----AMGSGI 257 (366)
Q Consensus 184 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 257 (366)
..+|+|+| -|++|.+.++.-|..+. -|..++.++... +|.-|.. ..+.+|.++-..+.+ ..+.++
T Consensus 3 agrVivYGGkGALGSacv~~Fkanny-wV~siDl~eNe~-------Ad~sI~V-~~~~swtEQe~~v~~~vg~sL~gekv 73 (236)
T KOG4022|consen 3 AGRVIVYGGKGALGSACVEFFKANNY-WVLSIDLSENEQ-------ADSSILV-DGNKSWTEQEQSVLEQVGSSLQGEKV 73 (236)
T ss_pred CceEEEEcCcchHhHHHHHHHHhcCe-EEEEEeeccccc-------ccceEEe-cCCcchhHHHHHHHHHHHHhhccccc
Confidence 35799997 59999999999999988 677776654321 2222211 122344333332221 236789
Q ss_pred cEEEEcCCChH--------------------------HHHHHHHhhcCCceEEEEcc
Q 017793 258 DVSFDCVGFDK--------------------------TMSTALNATRPGGKVCLIGL 288 (366)
Q Consensus 258 d~vld~~g~~~--------------------------~~~~~~~~l~~~G~~v~~g~ 288 (366)
|.||+-.|+-+ ....+-.+|++||-+-+.|.
T Consensus 74 Dav~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~GGLL~LtGA 130 (236)
T KOG4022|consen 74 DAVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPGGLLQLTGA 130 (236)
T ss_pred ceEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCCceeeeccc
Confidence 99999877631 12234457899998888764
No 460
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=93.43 E-value=0.99 Score=39.54 Aligned_cols=82 Identities=13% Similarity=0.183 Sum_probs=49.0
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChh--HHHHHHHcCCce-eeecC-CCCcchHHHHHHHHHhhCCCC
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQ--RLSIARNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGSGI 257 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~--~~~~~~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~ 257 (366)
.+.++||.| +|++|.+.++.+...|+ .|+.++.++. ..+.+++++... .+..+ .+.++..+.+.++.+. .+++
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~~ 86 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEAGC-DIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAE-FGHI 86 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-hCCC
Confidence 367899998 68999999998888899 5676655432 223334444221 11111 2223344444444332 3479
Q ss_pred cEEEEcCCC
Q 017793 258 DVSFDCVGF 266 (366)
Q Consensus 258 d~vld~~g~ 266 (366)
|+++.+.|.
T Consensus 87 D~li~~Ag~ 95 (253)
T PRK08993 87 DILVNNAGL 95 (253)
T ss_pred CEEEECCCC
Confidence 999999874
No 461
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=93.43 E-value=0.99 Score=39.56 Aligned_cols=81 Identities=23% Similarity=0.366 Sum_probs=50.3
Q ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcCCce-eeecC-CCCcchHHHHHHHHHhhCCCCcE
Q 017793 184 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-NLGADE-TAKVS-TDIEDVDTDVGKIQNAMGSGIDV 259 (366)
Q Consensus 184 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~d~ 259 (366)
+.++||.| +|.+|...++.+...|+ .|+.++++.++.+.+. +++... .+..+ .+..+....+.++.+. .+.+|+
T Consensus 6 ~~~vlItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id~ 83 (257)
T PRK07067 6 GKVALLTGAASGIGEAVAERYLAEGA-RVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVER-FGGIDI 83 (257)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHH-cCCCCE
Confidence 56899998 69999998888888899 6788878777654433 343221 11111 2223333444443332 346999
Q ss_pred EEEcCCC
Q 017793 260 SFDCVGF 266 (366)
Q Consensus 260 vld~~g~ 266 (366)
++.+.|.
T Consensus 84 li~~ag~ 90 (257)
T PRK07067 84 LFNNAAL 90 (257)
T ss_pred EEECCCc
Confidence 9998763
No 462
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=93.42 E-value=0.8 Score=37.70 Aligned_cols=94 Identities=19% Similarity=0.256 Sum_probs=58.4
Q ss_pred EEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcC
Q 017793 186 NVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCV 264 (366)
Q Consensus 186 ~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~ 264 (366)
+|.|+| +|-+|...++=|+..|- .|.++.++++|....+..-.- ..+--+..+. .. .-.|+|+||++.
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGH-eVTAivRn~~K~~~~~~~~i~-----q~Difd~~~~-a~----~l~g~DaVIsA~ 70 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGH-EVTAIVRNASKLAARQGVTIL-----QKDIFDLTSL-AS----DLAGHDAVISAF 70 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCC-eeEEEEeChHhccccccceee-----cccccChhhh-Hh----hhcCCceEEEec
Confidence 578888 69999999999999998 577777888887543222111 1111111111 11 136899999999
Q ss_pred CCh--H-------HHHHHHHhhcCC--ceEEEEcccC
Q 017793 265 GFD--K-------TMSTALNATRPG--GKVCLIGLAK 290 (366)
Q Consensus 265 g~~--~-------~~~~~~~~l~~~--G~~v~~g~~~ 290 (366)
+.. + ..+.++..|+.. -|+..+|..+
T Consensus 71 ~~~~~~~~~~~~k~~~~li~~l~~agv~RllVVGGAG 107 (211)
T COG2910 71 GAGASDNDELHSKSIEALIEALKGAGVPRLLVVGGAG 107 (211)
T ss_pred cCCCCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCcc
Confidence 875 1 233355566653 3777777544
No 463
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=93.42 E-value=0.96 Score=39.08 Aligned_cols=83 Identities=17% Similarity=0.250 Sum_probs=56.5
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH--HcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEc
Q 017793 186 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR--NLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDC 263 (366)
Q Consensus 186 ~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~--~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~ 263 (366)
+++|.|+|.+|...++.+...|. .|+.++.++++.+... ++....+.- +... .+. +.+.+-..+|+++-+
T Consensus 2 ~iiIiG~G~vG~~va~~L~~~g~-~Vv~Id~d~~~~~~~~~~~~~~~~v~g-d~t~---~~~---L~~agi~~aD~vva~ 73 (225)
T COG0569 2 KIIIIGAGRVGRSVARELSEEGH-NVVLIDRDEERVEEFLADELDTHVVIG-DATD---EDV---LEEAGIDDADAVVAA 73 (225)
T ss_pred EEEEECCcHHHHHHHHHHHhCCC-ceEEEEcCHHHHHHHhhhhcceEEEEe-cCCC---HHH---HHhcCCCcCCEEEEe
Confidence 57899999999999999999998 6888889998876633 355443322 2211 223 333456789999999
Q ss_pred CCChHHHHHHHHhh
Q 017793 264 VGFDKTMSTALNAT 277 (366)
Q Consensus 264 ~g~~~~~~~~~~~l 277 (366)
.|.. -.+..+-.+
T Consensus 74 t~~d-~~N~i~~~l 86 (225)
T COG0569 74 TGND-EVNSVLALL 86 (225)
T ss_pred eCCC-HHHHHHHHH
Confidence 9975 344433333
No 464
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=93.41 E-value=0.4 Score=43.01 Aligned_cols=43 Identities=21% Similarity=0.362 Sum_probs=36.1
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH
Q 017793 183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR 225 (366)
Q Consensus 183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~ 225 (366)
.+.++||+|+|+.+.+++.-+...|+.++.+++++.+|.+.+.
T Consensus 126 ~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La 168 (283)
T PRK14027 126 KLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALA 168 (283)
T ss_pred CCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHH
Confidence 4678999999999999888888899988888888888766543
No 465
>COG0144 Sun tRNA and rRNA cytosine-C5-methylases [Translation, ribosomal structure and biogenesis]
Probab=93.41 E-value=1.3 Score=41.17 Aligned_cols=104 Identities=21% Similarity=0.273 Sum_probs=63.1
Q ss_pred HhCCCCCCCEEEEECC--CHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCceeeecCCCCcchHHHHHHHH
Q 017793 177 RRANVGPETNVMIMGS--GPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADETAKVSTDIEDVDTDVGKIQ 250 (366)
Q Consensus 177 ~~~~~~~~~~vlI~G~--g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~~~~~~~~~~~~~~~~~~~~ 250 (366)
...+.++|++||=.-| |+--....|++...|. .|++++.+++|.+.+ +.+|...+.....+...+.....
T Consensus 150 ~~L~p~pge~VlD~cAAPGGKTthla~~~~~~~~-iV~A~D~~~~Rl~~l~~nl~RlG~~nv~~~~~d~~~~~~~~~--- 225 (355)
T COG0144 150 LVLDPKPGERVLDLCAAPGGKTTHLAELMENEGA-IVVAVDVSPKRLKRLRENLKRLGVRNVIVVNKDARRLAELLP--- 225 (355)
T ss_pred HHcCCCCcCEEEEECCCCCCHHHHHHHhcCCCCc-eEEEEcCCHHHHHHHHHHHHHcCCCceEEEeccccccccccc---
Confidence 4567899999998743 4433333333333344 579999999987765 45888754333333222221110
Q ss_pred HhhCCCCcEEEE---cCCCh-------------------------HHHHHHHHhhcCCceEEEE
Q 017793 251 NAMGSGIDVSFD---CVGFD-------------------------KTMSTALNATRPGGKVCLI 286 (366)
Q Consensus 251 ~~~~~~~d~vld---~~g~~-------------------------~~~~~~~~~l~~~G~~v~~ 286 (366)
.+..||-|+- |+|.. ..+..++..|++||+++..
T Consensus 226 --~~~~fD~iLlDaPCSg~G~irr~Pd~~~~~~~~~i~~l~~lQ~~iL~~a~~~lk~GG~LVYS 287 (355)
T COG0144 226 --GGEKFDRILLDAPCSGTGVIRRDPDVKWRRTPEDIAELAKLQKEILAAALKLLKPGGVLVYS 287 (355)
T ss_pred --ccCcCcEEEECCCCCCCcccccCccccccCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 1224888854 55543 3667788999999998763
No 466
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=93.37 E-value=0.76 Score=41.13 Aligned_cols=87 Identities=20% Similarity=0.203 Sum_probs=54.8
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCC
Q 017793 186 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVG 265 (366)
Q Consensus 186 ~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g 265 (366)
+|.|+|.|.+|......++..|. .|.+.++++++.+.+.+.|.-... . .+. + . -..+|+||-|+.
T Consensus 2 ~I~IIG~G~mG~sla~~L~~~g~-~V~~~d~~~~~~~~a~~~g~~~~~---~--~~~-~----~----~~~aDlVilavp 66 (279)
T PRK07417 2 KIGIVGLGLIGGSLGLDLRSLGH-TVYGVSRRESTCERAIERGLVDEA---S--TDL-S----L----LKDCDLVILALP 66 (279)
T ss_pred eEEEEeecHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCCcccc---c--CCH-h----H----hcCCCEEEEcCC
Confidence 58899999999877777777787 789999999888888777642110 1 111 1 1 145899999988
Q ss_pred ChHHH---HHHHHhhcCCceEEEEc
Q 017793 266 FDKTM---STALNATRPGGKVCLIG 287 (366)
Q Consensus 266 ~~~~~---~~~~~~l~~~G~~v~~g 287 (366)
..... ......+.++..+..++
T Consensus 67 ~~~~~~~~~~l~~~l~~~~ii~d~~ 91 (279)
T PRK07417 67 IGLLLPPSEQLIPALPPEAIVTDVG 91 (279)
T ss_pred HHHHHHHHHHHHHhCCCCcEEEeCc
Confidence 54322 22333344444444443
No 467
>PRK07856 short chain dehydrogenase; Provisional
Probab=93.35 E-value=0.77 Score=40.16 Aligned_cols=78 Identities=22% Similarity=0.201 Sum_probs=47.0
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCc-eeeecC-CCCcchHHHHHHHHHhhCCCCcE
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD-ETAKVS-TDIEDVDTDVGKIQNAMGSGIDV 259 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~ 259 (366)
.+.++||.| +|++|...++.+...|+ .|+.+++++++ ...+.. ..+..+ .+..+....+.++.+. -+.+|+
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~-~v~~~~r~~~~----~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id~ 78 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGA-TVVVCGRRAPE----TVDGRPAEFHAADVRDPDQVAALVDAIVER-HGRLDV 78 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCChhh----hhcCCceEEEEccCCCHHHHHHHHHHHHHH-cCCCCE
Confidence 468899998 68999998888888898 67777776654 112211 111111 1222333333333322 346899
Q ss_pred EEEcCCC
Q 017793 260 SFDCVGF 266 (366)
Q Consensus 260 vld~~g~ 266 (366)
+|.+.|.
T Consensus 79 vi~~ag~ 85 (252)
T PRK07856 79 LVNNAGG 85 (252)
T ss_pred EEECCCC
Confidence 9998874
No 468
>PRK06181 short chain dehydrogenase; Provisional
Probab=93.31 E-value=1.1 Score=39.34 Aligned_cols=80 Identities=21% Similarity=0.312 Sum_probs=47.9
Q ss_pred CEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCcee-eecC-CCCcchHHHHHHHHHhhCCCC
Q 017793 185 TNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADET-AKVS-TDIEDVDTDVGKIQNAMGSGI 257 (366)
Q Consensus 185 ~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~ 257 (366)
.++||.| +|.+|...++.+...|. .|+.+++++++.+.+ +..+.... +..+ .+...+...+.+.... -+++
T Consensus 2 ~~vlVtGasg~iG~~la~~l~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~i 79 (263)
T PRK06181 2 KVVIITGASEGIGRALAVRLARAGA-QLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVAR-FGGI 79 (263)
T ss_pred CEEEEecCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-cCCC
Confidence 5789998 59999999988888898 688887776654322 22333211 1111 1222333333333221 2469
Q ss_pred cEEEEcCCC
Q 017793 258 DVSFDCVGF 266 (366)
Q Consensus 258 d~vld~~g~ 266 (366)
|+++.+.|.
T Consensus 80 d~vi~~ag~ 88 (263)
T PRK06181 80 DILVNNAGI 88 (263)
T ss_pred CEEEECCCc
Confidence 999999864
No 469
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=93.29 E-value=0.86 Score=39.48 Aligned_cols=82 Identities=22% Similarity=0.281 Sum_probs=48.9
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCCce-eeecC-CCCcchHHHHHHHHHhhCCCCc
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGSGID 258 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~d 258 (366)
++.++||.| +|.+|...++.+...|. .|+..+++.++.+.+ ..++... .+..+ ++...+...+.++.. .-+++|
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~id 82 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGA-IVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEA-DLEGVD 82 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHH-HcCCCC
Confidence 367899998 69999998888887898 677776666655433 3344321 11111 122233333333322 135799
Q ss_pred EEEEcCCC
Q 017793 259 VSFDCVGF 266 (366)
Q Consensus 259 ~vld~~g~ 266 (366)
.++.+.|.
T Consensus 83 ~vi~~ag~ 90 (245)
T PRK12936 83 ILVNNAGI 90 (245)
T ss_pred EEEECCCC
Confidence 99999874
No 470
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.28 E-value=2.9 Score=36.28 Aligned_cols=105 Identities=14% Similarity=0.202 Sum_probs=58.1
Q ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHH-H---HHHHcCCce-eeecC-CCCcchHHHHHHHHHhhCCC
Q 017793 184 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRL-S---IARNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGSG 256 (366)
Q Consensus 184 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~-~---~~~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~ 256 (366)
+.++||.| +|.+|...++-+...|++.++...++.+.. + .+++.+... .+..+ ++..+....+.++... -.+
T Consensus 6 ~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~ 84 (252)
T PRK06077 6 DKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDR-YGV 84 (252)
T ss_pred CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHH-cCC
Confidence 57899998 689999888877788985334343333322 2 223333321 11111 1222333333333322 247
Q ss_pred CcEEEEcCCCh----------H---------------HHHHHHHhhcCCceEEEEccc
Q 017793 257 IDVSFDCVGFD----------K---------------TMSTALNATRPGGKVCLIGLA 289 (366)
Q Consensus 257 ~d~vld~~g~~----------~---------------~~~~~~~~l~~~G~~v~~g~~ 289 (366)
+|.+|.+.|.. + ..+.+.+.++..|+++.++..
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~ 142 (252)
T PRK06077 85 ADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASV 142 (252)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcch
Confidence 99999999731 1 123345556677899888753
No 471
>PRK06153 hypothetical protein; Provisional
Probab=93.25 E-value=0.38 Score=44.60 Aligned_cols=34 Identities=24% Similarity=0.220 Sum_probs=29.7
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCC
Q 017793 184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD 217 (366)
Q Consensus 184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~ 217 (366)
+.+|+|.|+|++|...+..+-+.|..+++.+|.+
T Consensus 176 ~~~VaIVG~GG~GS~Va~~LAR~GVgeI~LVD~D 209 (393)
T PRK06153 176 GQRIAIIGLGGTGSYILDLVAKTPVREIHLFDGD 209 (393)
T ss_pred hCcEEEEcCCccHHHHHHHHHHcCCCEEEEECCC
Confidence 5789999999999999888888999888888643
No 472
>PRK06101 short chain dehydrogenase; Provisional
Probab=93.24 E-value=0.66 Score=40.28 Aligned_cols=42 Identities=24% Similarity=0.228 Sum_probs=32.1
Q ss_pred CEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc
Q 017793 185 TNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL 227 (366)
Q Consensus 185 ~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l 227 (366)
.++||.| +|++|...+..+...|+ .|+.+++++++.+.+.+.
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~ 44 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGW-QVIACGRNQSVLDELHTQ 44 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHh
Confidence 4689998 69999887777777898 688888888777655543
No 473
>PRK07577 short chain dehydrogenase; Provisional
Probab=93.24 E-value=0.54 Score=40.52 Aligned_cols=74 Identities=20% Similarity=0.343 Sum_probs=45.9
Q ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCce-eeecCCCCcchHHHHHHHHHhhCCCCcEEE
Q 017793 184 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE-TAKVSTDIEDVDTDVGKIQNAMGSGIDVSF 261 (366)
Q Consensus 184 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl 261 (366)
+.++||.| +|.+|...++.+...|. .|+.+.++.++ .+.... ..|. .+...+...+.++.+ ..++|++|
T Consensus 3 ~k~vlItG~s~~iG~~ia~~l~~~G~-~v~~~~r~~~~-----~~~~~~~~~D~-~~~~~~~~~~~~~~~--~~~~d~vi 73 (234)
T PRK07577 3 SRTVLVTGATKGIGLALSLRLANLGH-QVIGIARSAID-----DFPGELFACDL-ADIEQTAATLAQINE--IHPVDAIV 73 (234)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCccc-----ccCceEEEeeC-CCHHHHHHHHHHHHH--hCCCcEEE
Confidence 56899998 69999998888888898 67777666544 111111 1222 222333344444433 23689999
Q ss_pred EcCCC
Q 017793 262 DCVGF 266 (366)
Q Consensus 262 d~~g~ 266 (366)
.+.|.
T Consensus 74 ~~ag~ 78 (234)
T PRK07577 74 NNVGI 78 (234)
T ss_pred ECCCC
Confidence 98874
No 474
>PRK06197 short chain dehydrogenase; Provisional
Probab=93.24 E-value=0.92 Score=41.06 Aligned_cols=82 Identities=17% Similarity=0.277 Sum_probs=47.6
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHH-HHHc----CCcee--eecC-CCCcchHHHHHHHHHhh
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARNL----GADET--AKVS-TDIEDVDTDVGKIQNAM 253 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~l----g~~~~--~~~~-~~~~~~~~~~~~~~~~~ 253 (366)
.+.++||.| +|++|...++.+...|+ .|+.+.++.++.+. .+++ +...+ +..+ .+.++..+.+.++.+.
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~- 92 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGA-HVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAA- 92 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhh-
Confidence 467899998 69999988887777898 67777677665432 2222 11111 1111 1222333333333321
Q ss_pred CCCCcEEEEcCCC
Q 017793 254 GSGIDVSFDCVGF 266 (366)
Q Consensus 254 ~~~~d~vld~~g~ 266 (366)
-+++|++|.+.|.
T Consensus 93 ~~~iD~li~nAg~ 105 (306)
T PRK06197 93 YPRIDLLINNAGV 105 (306)
T ss_pred CCCCCEEEECCcc
Confidence 3469999999873
No 475
>PRK06114 short chain dehydrogenase; Provisional
Probab=93.17 E-value=1.2 Score=39.03 Aligned_cols=82 Identities=15% Similarity=0.248 Sum_probs=48.2
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChh-H-HHHHH---HcCCce-eeecC-CCCcchHHHHHHHHHhhC
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQ-R-LSIAR---NLGADE-TAKVS-TDIEDVDTDVGKIQNAMG 254 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~-~-~~~~~---~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~ 254 (366)
.+.++||.| ++++|.+.++.+...|+ .++.++++++ . .+.++ +.+... .+..+ .+..+....+.++... -
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~-~ 84 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGA-DVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAE-L 84 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH-c
Confidence 367899998 68999999888888899 5666665543 2 22222 233221 11111 2223334444443332 3
Q ss_pred CCCcEEEEcCCC
Q 017793 255 SGIDVSFDCVGF 266 (366)
Q Consensus 255 ~~~d~vld~~g~ 266 (366)
+.+|+++.+.|.
T Consensus 85 g~id~li~~ag~ 96 (254)
T PRK06114 85 GALTLAVNAAGI 96 (254)
T ss_pred CCCCEEEECCCC
Confidence 569999999874
No 476
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=93.16 E-value=2.2 Score=37.12 Aligned_cols=77 Identities=21% Similarity=0.210 Sum_probs=45.6
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCce-eeecC-CCCcchHHHHHHHHHhhCCCCcE
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGSGIDV 259 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~d~ 259 (366)
++.++||.| +|.+|...++.+...|. +++.++++. +...+... .+..+ .+...+.+.+.++.. ..+.+|+
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~-~v~~~~~~~-----~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~id~ 79 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGA-KVIGFDQAF-----LTQEDYPFATFVLDVSDAAAVAQVCQRLLA-ETGPLDV 79 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecch-----hhhcCCceEEEEecCCCHHHHHHHHHHHHH-HcCCCCE
Confidence 357899998 68999998888887898 677776654 22222211 11111 122233333333332 1356999
Q ss_pred EEEcCCC
Q 017793 260 SFDCVGF 266 (366)
Q Consensus 260 vld~~g~ 266 (366)
+|.+.|.
T Consensus 80 vi~~ag~ 86 (252)
T PRK08220 80 LVNAAGI 86 (252)
T ss_pred EEECCCc
Confidence 9999875
No 477
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.16 E-value=0.99 Score=39.29 Aligned_cols=83 Identities=17% Similarity=0.164 Sum_probs=47.6
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHH----HHHcCCce-eeecC-CCCcchHHHHHHHHHhhCC
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI----ARNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGS 255 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~----~~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~ 255 (366)
++.++||.| +|.+|...+..+...|++.++...++.++.+. +++.+... .+..+ ++..+....+.+.... -+
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~ 81 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEE-FG 81 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH-cC
Confidence 457899998 69999998888888898544434555544322 22234322 11111 2223333334344332 24
Q ss_pred CCcEEEEcCCC
Q 017793 256 GIDVSFDCVGF 266 (366)
Q Consensus 256 ~~d~vld~~g~ 266 (366)
++|++|.+.|.
T Consensus 82 ~id~vi~~ag~ 92 (250)
T PRK08063 82 RLDVFVNNAAS 92 (250)
T ss_pred CCCEEEECCCC
Confidence 69999998874
No 478
>PRK09134 short chain dehydrogenase; Provisional
Probab=93.16 E-value=0.83 Score=40.12 Aligned_cols=82 Identities=18% Similarity=0.225 Sum_probs=45.7
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHH-HHHH---cCCce-e--eecCCCCcchHHHHHHHHHhhC
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARN---LGADE-T--AKVSTDIEDVDTDVGKIQNAMG 254 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~---lg~~~-~--~~~~~~~~~~~~~~~~~~~~~~ 254 (366)
.+.++||.| +|.+|...++.+...|++.++...++.++.+ ..++ .+... . .|. ++.....+.+.+..+. .
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-~d~~~~~~~~~~~~~~-~ 85 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADL-ADEAEVRALVARASAA-L 85 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCC-CCHHHHHHHHHHHHHH-c
Confidence 456899998 6899998888887889844444444444332 2222 23321 1 122 1222333333333222 3
Q ss_pred CCCcEEEEcCCC
Q 017793 255 SGIDVSFDCVGF 266 (366)
Q Consensus 255 ~~~d~vld~~g~ 266 (366)
+++|+++.+.|.
T Consensus 86 ~~iD~vi~~ag~ 97 (258)
T PRK09134 86 GPITLLVNNASL 97 (258)
T ss_pred CCCCEEEECCcC
Confidence 479999999874
No 479
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=93.16 E-value=2.9 Score=36.05 Aligned_cols=82 Identities=22% Similarity=0.286 Sum_probs=45.0
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHH-HH---HHcCCce-ee--ecCCCCcchHHHHHHHHHhhC
Q 017793 183 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IA---RNLGADE-TA--KVSTDIEDVDTDVGKIQNAMG 254 (366)
Q Consensus 183 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~---~~lg~~~-~~--~~~~~~~~~~~~~~~~~~~~~ 254 (366)
.+.++||.| +|.+|...+..+...|++.++...+.+++.+ .. +..+... .+ |. .+...+.+.++++.+. -
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-~~~~~~~~~~~~~~~~-~ 81 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDV-SDAESVERAVDEAKAE-F 81 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCC-CCHHHHHHHHHHHHHH-c
Confidence 356899998 6999999999888889953344443333222 22 2223221 11 22 1122233333333221 2
Q ss_pred CCCcEEEEcCCC
Q 017793 255 SGIDVSFDCVGF 266 (366)
Q Consensus 255 ~~~d~vld~~g~ 266 (366)
.++|.++.+.|.
T Consensus 82 ~~id~vi~~ag~ 93 (248)
T PRK05557 82 GGVDILVNNAGI 93 (248)
T ss_pred CCCCEEEECCCc
Confidence 468999998874
No 480
>PLN02256 arogenate dehydrogenase
Probab=93.12 E-value=1.6 Score=39.60 Aligned_cols=90 Identities=18% Similarity=0.158 Sum_probs=54.1
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEE
Q 017793 182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF 261 (366)
Q Consensus 182 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl 261 (366)
..+.+|.|+|.|.+|...+..++..|. .|++++.++. .+.++++|... + .+..+ +. ....|+|+
T Consensus 34 ~~~~kI~IIG~G~mG~slA~~L~~~G~-~V~~~d~~~~-~~~a~~~gv~~---~----~~~~e----~~---~~~aDvVi 97 (304)
T PLN02256 34 SRKLKIGIVGFGNFGQFLAKTFVKQGH-TVLATSRSDY-SDIAAELGVSF---F----RDPDD----FC---EEHPDVVL 97 (304)
T ss_pred CCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECccH-HHHHHHcCCee---e----CCHHH----Hh---hCCCCEEE
Confidence 355789999999999988888887787 6778877764 35556666531 1 11111 11 13478888
Q ss_pred EcCCChHHHHHHHHh-----hcCCceEEEEcc
Q 017793 262 DCVGFDKTMSTALNA-----TRPGGKVCLIGL 288 (366)
Q Consensus 262 d~~g~~~~~~~~~~~-----l~~~G~~v~~g~ 288 (366)
-|+.... ....+.. +.++..++.++.
T Consensus 98 lavp~~~-~~~vl~~l~~~~l~~~~iviDv~S 128 (304)
T PLN02256 98 LCTSILS-TEAVLRSLPLQRLKRSTLFVDVLS 128 (304)
T ss_pred EecCHHH-HHHHHHhhhhhccCCCCEEEecCC
Confidence 8877542 2332222 345555555543
No 481
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=93.11 E-value=1.4 Score=39.18 Aligned_cols=96 Identities=15% Similarity=0.217 Sum_probs=57.7
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHH-HHHHcCCc-eeeecCCCCcchHHHHHHHHHhhCCCCcE
Q 017793 182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGAD-ETAKVSTDIEDVDTDVGKIQNAMGSGIDV 259 (366)
Q Consensus 182 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 259 (366)
..+.+++|+|+|++|.+++..+...|. .+.++++++++.+ +++++... ..... . . .+. ....+|+
T Consensus 115 ~~~k~vliiGaGg~g~aia~~L~~~g~-~v~v~~R~~~~~~~la~~~~~~~~~~~~-~----~----~~~---~~~~~Di 181 (270)
T TIGR00507 115 RPNQRVLIIGAGGAARAVALPLLKADC-NVIIANRTVSKAEELAERFQRYGEIQAF-S----M----DEL---PLHRVDL 181 (270)
T ss_pred ccCCEEEEEcCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhcCceEEe-c----h----hhh---cccCccE
Confidence 457889999999999988888877887 7777778777654 44443321 01111 0 0 011 1246899
Q ss_pred EEEcCCChH--HH---HHHHHhhcCCceEEEEcccC
Q 017793 260 SFDCVGFDK--TM---STALNATRPGGKVCLIGLAK 290 (366)
Q Consensus 260 vld~~g~~~--~~---~~~~~~l~~~G~~v~~g~~~ 290 (366)
|++|++..- .. ......++++..++.+...+
T Consensus 182 vInatp~gm~~~~~~~~~~~~~l~~~~~v~D~~y~p 217 (270)
T TIGR00507 182 IINATSAGMSGNIDEPPVPAEKLKEGMVVYDMVYNP 217 (270)
T ss_pred EEECCCCCCCCCCCCCCCCHHHcCCCCEEEEeccCC
Confidence 999998531 01 11234567777776665443
No 482
>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
Probab=93.11 E-value=0.94 Score=42.11 Aligned_cols=97 Identities=20% Similarity=0.256 Sum_probs=62.3
Q ss_pred CEEEEEC-CCHHHHHHHHHHHHC--CCCeEEEEc--CChhH-HHHHHHcCCceeeecCCCCcchHHHHHHHH--------
Q 017793 185 TNVMIMG-SGPIGLVTLLAARAF--GAPRIIITD--VDVQR-LSIARNLGADETAKVSTDIEDVDTDVGKIQ-------- 250 (366)
Q Consensus 185 ~~vlI~G-~g~vG~~ai~la~~~--g~~~vv~v~--~~~~~-~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~-------- 250 (366)
.+|.|+| +|++|..++.+.+.. .+ +++++. ++.++ .+++++++...+...+. .....++...
T Consensus 2 k~VaILGsTGSIG~~tL~vi~~~p~~f-~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~---~~~~~l~~~l~~~~~~v~ 77 (385)
T PRK05447 2 KRITILGSTGSIGTQTLDVIRRNPDRF-RVVALSAGKNVELLAEQAREFRPKYVVVADE---EAAKELKEALAAAGIEVL 77 (385)
T ss_pred ceEEEEcCChHHHHHHHHHHHhCcccc-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCH---HHHHHHHHhhccCCceEE
Confidence 4789999 799999999988765 45 455553 34443 35667788876654321 1111122110
Q ss_pred -------Hh-hCCCCcEEEEcCCChHHHHHHHHhhcCCceEEE
Q 017793 251 -------NA-MGSGIDVSFDCVGFDKTMSTALNATRPGGKVCL 285 (366)
Q Consensus 251 -------~~-~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~ 285 (366)
+. ....+|+|+.++++...+...+..++.|-++.+
T Consensus 78 ~G~~~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aGK~VaL 120 (385)
T PRK05447 78 AGEEGLCELAALPEADVVVAAIVGAAGLLPTLAAIRAGKRIAL 120 (385)
T ss_pred EChhHHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCCCcEEE
Confidence 00 123589999999987777888888887777665
No 483
>PRK04207 glyceraldehyde-3-phosphate dehydrogenase; Provisional
Probab=93.11 E-value=1.2 Score=41.24 Aligned_cols=99 Identities=15% Similarity=0.017 Sum_probs=55.6
Q ss_pred EEEEECCCHHHHHHHHHHHH-CCCCeEEEEcCChhHHHH-HHHcCCceeee-------cCCCCcchHHHHHHHHHhhCCC
Q 017793 186 NVMIMGSGPIGLVTLLAARA-FGAPRIIITDVDVQRLSI-ARNLGADETAK-------VSTDIEDVDTDVGKIQNAMGSG 256 (366)
Q Consensus 186 ~vlI~G~g~vG~~ai~la~~-~g~~~vv~v~~~~~~~~~-~~~lg~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~ 256 (366)
+|.|.|+|.+|+..++.+.. -+++.+.+.+.+++.... ++..|.+.... +....-.......++ -.+
T Consensus 3 kVaI~G~GrIGr~va~al~~~~d~eLvav~d~~~~~~~~la~~~G~~~~~~~~~~~~~~~~~~i~V~~~~~el----~~~ 78 (341)
T PRK04207 3 KVGVNGYGTIGKRVADAVAAQPDMELVGVAKTKPDYEARVAVEKGYPLYVADPEREKAFEEAGIPVAGTIEDL----LEK 78 (341)
T ss_pred EEEEECCCHHHHHHHHHHhcCCCcEEEEEECCChHHHHHHHHhcCCCccccCccccccccCCceEEcCChhHh----hcc
Confidence 68899999999988887764 356445555545444443 44444331100 000000000111222 146
Q ss_pred CcEEEEcCCChHHHHHHHHhhcCCceEEEEcc
Q 017793 257 IDVSFDCVGFDKTMSTALNATRPGGKVCLIGL 288 (366)
Q Consensus 257 ~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~ 288 (366)
+|+|+||.+...+....-.+++.|-+++..+.
T Consensus 79 vDVVIdaT~~~~~~e~a~~~~~aGk~VI~~~~ 110 (341)
T PRK04207 79 ADIVVDATPGGVGAKNKELYEKAGVKAIFQGG 110 (341)
T ss_pred CCEEEECCCchhhHHHHHHHHHCCCEEEEcCC
Confidence 99999999987666666666776655555543
No 484
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=93.11 E-value=0.69 Score=40.21 Aligned_cols=95 Identities=24% Similarity=0.343 Sum_probs=62.3
Q ss_pred CHHHHHHHHHHHHCCCCeEEEEcCChhH-----HHHHHHcCCceeeecCC-CCcchHHHHHHHHHhhCCCCcEEEEcCCC
Q 017793 193 GPIGLVTLLAARAFGAPRIIITDVDVQR-----LSIARNLGADETAKVST-DIEDVDTDVGKIQNAMGSGIDVSFDCVGF 266 (366)
Q Consensus 193 g~vG~~ai~la~~~g~~~vv~v~~~~~~-----~~~~~~lg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~vld~~g~ 266 (366)
+++|.+.++-+...|+ +|+.++++.++ .++.++.+.+ ++..+- +.++....+.++.+..++.+|+++.+.+.
T Consensus 6 ~GiG~aia~~l~~~Ga-~V~~~~~~~~~~~~~~~~l~~~~~~~-~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~a~~ 83 (241)
T PF13561_consen 6 SGIGRAIARALAEEGA-NVILTDRNEEKLADALEELAKEYGAE-VIQCDLSDEESVEALFDEAVERFGGRIDILVNNAGI 83 (241)
T ss_dssp SHHHHHHHHHHHHTTE-EEEEEESSHHHHHHHHHHHHHHTTSE-EEESCTTSHHHHHHHHHHHHHHHCSSESEEEEEEES
T ss_pred CChHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHHHcCCc-eEeecCcchHHHHHHHHHHHhhcCCCeEEEEecccc
Confidence 7999999999889999 78888888876 2344556654 433332 33444444455554444789999887643
Q ss_pred h-----------------------------HHHHHHHHhhcCCceEEEEccc
Q 017793 267 D-----------------------------KTMSTALNATRPGGKVCLIGLA 289 (366)
Q Consensus 267 ~-----------------------------~~~~~~~~~l~~~G~~v~~g~~ 289 (366)
. ...+.+.+.++++|.++.++..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~ 135 (241)
T PF13561_consen 84 SPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSI 135 (241)
T ss_dssp CTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEG
T ss_pred cccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccch
Confidence 2 1334455677888998887643
No 485
>PRK08223 hypothetical protein; Validated
Probab=93.06 E-value=0.92 Score=40.53 Aligned_cols=34 Identities=32% Similarity=0.549 Sum_probs=30.0
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCC
Q 017793 184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD 217 (366)
Q Consensus 184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~ 217 (366)
..+|||.|+|++|..+++.+.+.|+..+..+|.+
T Consensus 27 ~s~VlIvG~GGLGs~va~~LA~aGVG~i~lvD~D 60 (287)
T PRK08223 27 NSRVAIAGLGGVGGIHLLTLARLGIGKFTIADFD 60 (287)
T ss_pred cCCEEEECCCHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 5789999999999999999999999888888643
No 486
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=93.05 E-value=0.84 Score=45.69 Aligned_cols=93 Identities=15% Similarity=0.093 Sum_probs=65.6
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcC
Q 017793 185 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCV 264 (366)
Q Consensus 185 ~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~ 264 (366)
+.|+|.|.|.+|+..++.++..|. .+++++.++++.+.+++.|...++- +..+ .+. +.+.+-..+|.++-+.
T Consensus 401 ~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~G-Dat~---~~~---L~~agi~~A~~vv~~~ 472 (601)
T PRK03659 401 PQVIIVGFGRFGQVIGRLLMANKM-RITVLERDISAVNLMRKYGYKVYYG-DATQ---LEL---LRAAGAEKAEAIVITC 472 (601)
T ss_pred CCEEEecCchHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhCCCeEEEe-eCCC---HHH---HHhcCCccCCEEEEEe
Confidence 579999999999999999999998 7999999999999999988654322 2211 122 2223456799999999
Q ss_pred CChHHHHH---HHHhhcCCceEEE
Q 017793 265 GFDKTMST---ALNATRPGGKVCL 285 (366)
Q Consensus 265 g~~~~~~~---~~~~l~~~G~~v~ 285 (366)
+.++.-.. ..+.+.|.-+++.
T Consensus 473 ~d~~~n~~i~~~~r~~~p~~~Iia 496 (601)
T PRK03659 473 NEPEDTMKIVELCQQHFPHLHILA 496 (601)
T ss_pred CCHHHHHHHHHHHHHHCCCCeEEE
Confidence 87643222 2344556666654
No 487
>TIGR01934 MenG_MenH_UbiE ubiquinone/menaquinone biosynthesis methyltransferases. Note that a number of non-orthologous genes which are members of pfam03737 have been erroneously annotated as MenG methyltransferases.
Probab=93.05 E-value=1.1 Score=38.27 Aligned_cols=104 Identities=14% Similarity=0.250 Sum_probs=65.0
Q ss_pred HhCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHHHcCC--ceeeecCCCCcchHHHHHHHHHhh
Q 017793 177 RRANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARNLGA--DETAKVSTDIEDVDTDVGKIQNAM 253 (366)
Q Consensus 177 ~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~lg~--~~~~~~~~~~~~~~~~~~~~~~~~ 253 (366)
......++.+||-+|+|. |..+..+++..+. ..+++++.+++..+.+++... +.+..... +..+ .. ..
T Consensus 33 ~~~~~~~~~~vldiG~G~-G~~~~~~~~~~~~~~~~~~iD~~~~~~~~~~~~~~~~~~i~~~~~---d~~~----~~-~~ 103 (223)
T TIGR01934 33 KLIGVFKGQKVLDVACGT-GDLAIELAKSAPDRGKVTGVDFSSEMLEVAKKKSELPLNIEFIQA---DAEA----LP-FE 103 (223)
T ss_pred HHhccCCCCeEEEeCCCC-ChhHHHHHHhcCCCceEEEEECCHHHHHHHHHHhccCCCceEEec---chhc----CC-CC
Confidence 334455788999999876 7777788887653 379999999887777665332 11111111 1111 10 01
Q ss_pred CCCCcEEEEcCC-----C-hHHHHHHHHhhcCCceEEEEccc
Q 017793 254 GSGIDVSFDCVG-----F-DKTMSTALNATRPGGKVCLIGLA 289 (366)
Q Consensus 254 ~~~~d~vld~~g-----~-~~~~~~~~~~l~~~G~~v~~g~~ 289 (366)
...+|+++.+.+ . ...+..+.+.|+++|+++.++..
T Consensus 104 ~~~~D~i~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 145 (223)
T TIGR01934 104 DNSFDAVTIAFGLRNVTDIQKALREMYRVLKPGGRLVILEFS 145 (223)
T ss_pred CCcEEEEEEeeeeCCcccHHHHHHHHHHHcCCCcEEEEEEec
Confidence 346898875432 1 24577788899999999987643
No 488
>PRK13403 ketol-acid reductoisomerase; Provisional
Probab=93.05 E-value=1.6 Score=39.67 Aligned_cols=86 Identities=14% Similarity=0.170 Sum_probs=57.5
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793 183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD 262 (366)
Q Consensus 183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld 262 (366)
.+.+|.|+|-|.+|.+.++.++..|. .|++..+.....+.+++.|+.. . + +.++. ...|+|+-
T Consensus 15 kgKtVGIIG~GsIG~amA~nL~d~G~-~ViV~~r~~~s~~~A~~~G~~v-~-------s----l~Eaa----k~ADVV~l 77 (335)
T PRK13403 15 QGKTVAVIGYGSQGHAQAQNLRDSGV-EVVVGVRPGKSFEVAKADGFEV-M-------S----VSEAV----RTAQVVQM 77 (335)
T ss_pred CcCEEEEEeEcHHHHHHHHHHHHCcC-EEEEEECcchhhHHHHHcCCEE-C-------C----HHHHH----hcCCEEEE
Confidence 57899999999999999999999999 5555544445555666666531 1 1 22222 35899998
Q ss_pred cCCChHH---H-HHHHHhhcCCceEEE
Q 017793 263 CVGFDKT---M-STALNATRPGGKVCL 285 (366)
Q Consensus 263 ~~g~~~~---~-~~~~~~l~~~G~~v~ 285 (366)
+++.+.. + ...+..|+++..++.
T Consensus 78 lLPd~~t~~V~~~eil~~MK~GaiL~f 104 (335)
T PRK13403 78 LLPDEQQAHVYKAEVEENLREGQMLLF 104 (335)
T ss_pred eCCChHHHHHHHHHHHhcCCCCCEEEE
Confidence 8876433 2 234566777765554
No 489
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=93.04 E-value=0.47 Score=36.51 Aligned_cols=90 Identities=18% Similarity=0.211 Sum_probs=52.1
Q ss_pred EEEEEC-CCHHHHHHHHHHHHC-CCCeEEEEcCCh-hHHHHHHHcC----CceeeecCCCCcchHHHHHHHHHhhCCCCc
Q 017793 186 NVMIMG-SGPIGLVTLLAARAF-GAPRIIITDVDV-QRLSIARNLG----ADETAKVSTDIEDVDTDVGKIQNAMGSGID 258 (366)
Q Consensus 186 ~vlI~G-~g~vG~~ai~la~~~-g~~~vv~v~~~~-~~~~~~~~lg----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 258 (366)
+|.|+| +|.+|...++++... .++.+..+.++. ....+...++ ..... ... .+ ...+ ..+|
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~--~~----~~~~-----~~~D 68 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLS-VED--AD----PEEL-----SDVD 68 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEB-EEE--TS----GHHH-----TTES
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhcccccccccee-Eee--cc----hhHh-----hcCC
Confidence 689999 799999998888864 454444444444 2222222222 11111 111 01 1111 5799
Q ss_pred EEEEcCCChHHHHHHHHhhcCCceEEEEc
Q 017793 259 VSFDCVGFDKTMSTALNATRPGGKVCLIG 287 (366)
Q Consensus 259 ~vld~~g~~~~~~~~~~~l~~~G~~v~~g 287 (366)
+||.|.+.....+..-..+..+-+++..+
T Consensus 69 vvf~a~~~~~~~~~~~~~~~~g~~ViD~s 97 (121)
T PF01118_consen 69 VVFLALPHGASKELAPKLLKAGIKVIDLS 97 (121)
T ss_dssp EEEE-SCHHHHHHHHHHHHHTTSEEEESS
T ss_pred EEEecCchhHHHHHHHHHhhCCcEEEeCC
Confidence 99999997756556656667777787765
No 490
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=93.04 E-value=0.25 Score=38.41 Aligned_cols=80 Identities=18% Similarity=0.181 Sum_probs=47.1
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEc-CChhHHHHHHH-cCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEE
Q 017793 184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITD-VDVQRLSIARN-LGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF 261 (366)
Q Consensus 184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~-~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl 261 (366)
.-+|-|+|+|.+|......++..|. .|..+. ++.++.+.+.. ++...+.++ .+ + -..+|++|
T Consensus 10 ~l~I~iIGaGrVG~~La~aL~~ag~-~v~~v~srs~~sa~~a~~~~~~~~~~~~-------~~----~----~~~aDlv~ 73 (127)
T PF10727_consen 10 RLKIGIIGAGRVGTALARALARAGH-EVVGVYSRSPASAERAAAFIGAGAILDL-------EE----I----LRDADLVF 73 (127)
T ss_dssp --EEEEECTSCCCCHHHHHHHHTTS-EEEEESSCHH-HHHHHHC--TT-----T-------TG----G----GCC-SEEE
T ss_pred ccEEEEECCCHHHHHHHHHHHHCCC-eEEEEEeCCccccccccccccccccccc-------cc----c----cccCCEEE
Confidence 4578999999999999999999998 677764 44444444443 333222221 01 1 24689999
Q ss_pred EcCCChHHHHHHHHhhcCC
Q 017793 262 DCVGFDKTMSTALNATRPG 280 (366)
Q Consensus 262 d~~g~~~~~~~~~~~l~~~ 280 (366)
-++... .+...++.|...
T Consensus 74 iavpDd-aI~~va~~La~~ 91 (127)
T PF10727_consen 74 IAVPDD-AIAEVAEQLAQY 91 (127)
T ss_dssp E-S-CC-HHHHHHHHHHCC
T ss_pred EEechH-HHHHHHHHHHHh
Confidence 999966 666666766544
No 491
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=93.03 E-value=1.2 Score=40.21 Aligned_cols=69 Identities=19% Similarity=0.206 Sum_probs=47.0
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCC
Q 017793 186 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVG 265 (366)
Q Consensus 186 ~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g 265 (366)
+|.|+|.|.+|......+...|. .|++.++++++.+.+.+.|.... .+.. +.. ...|+||.|+.
T Consensus 1 ~IgvIG~G~mG~~iA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~-------~~~~----~~~----~~aDivi~~vp 64 (291)
T TIGR01505 1 KVGFIGLGIMGSPMSINLAKAGY-QLHVTTIGPEVADELLAAGAVTA-------ETAR----QVT----EQADVIFTMVP 64 (291)
T ss_pred CEEEEEecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCccc-------CCHH----HHH----hcCCEEEEecC
Confidence 47789999999877777777788 68888999988888777665321 1111 111 24788888877
Q ss_pred ChHHH
Q 017793 266 FDKTM 270 (366)
Q Consensus 266 ~~~~~ 270 (366)
.....
T Consensus 65 ~~~~~ 69 (291)
T TIGR01505 65 DSPQV 69 (291)
T ss_pred CHHHH
Confidence 65333
No 492
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.00 E-value=0.89 Score=39.35 Aligned_cols=81 Identities=21% Similarity=0.323 Sum_probs=48.0
Q ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HH---cCCce-eeecC-CCCcchHHHHHHHHHhhCCC
Q 017793 184 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RN---LGADE-TAKVS-TDIEDVDTDVGKIQNAMGSG 256 (366)
Q Consensus 184 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~---lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~ 256 (366)
+.++||.| +|.+|...+..+...|+ .|+.+++++++.+.+ .+ .+... .+..+ ++..++.+.++++.. .-++
T Consensus 7 ~~~vlVtG~sg~iG~~l~~~L~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~ 84 (239)
T PRK07666 7 GKNALITGAGRGIGRAVAIALAKEGV-NVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKN-ELGS 84 (239)
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHH-HcCC
Confidence 57899998 68999998888778899 677787776654322 22 23221 11111 122233333333322 2357
Q ss_pred CcEEEEcCCC
Q 017793 257 IDVSFDCVGF 266 (366)
Q Consensus 257 ~d~vld~~g~ 266 (366)
+|.+|.+.|.
T Consensus 85 id~vi~~ag~ 94 (239)
T PRK07666 85 IDILINNAGI 94 (239)
T ss_pred ccEEEEcCcc
Confidence 9999998864
No 493
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=92.97 E-value=1.8 Score=39.55 Aligned_cols=38 Identities=24% Similarity=0.205 Sum_probs=31.1
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHH
Q 017793 185 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSI 223 (366)
Q Consensus 185 ~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~ 223 (366)
.+|.|+|+|.+|.-.++.+...|. .|...+.+++..+.
T Consensus 8 ~~VaVIGaG~MG~giA~~~a~aG~-~V~l~D~~~~~~~~ 45 (321)
T PRK07066 8 KTFAAIGSGVIGSGWVARALAHGL-DVVAWDPAPGAEAA 45 (321)
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHH
Confidence 579999999999887777778899 78888888775543
No 494
>PRK08251 short chain dehydrogenase; Provisional
Probab=92.97 E-value=1.4 Score=38.39 Aligned_cols=79 Identities=20% Similarity=0.260 Sum_probs=47.2
Q ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-c-----CCce-e--eecCCCCcchHHHHHHHHHhh
Q 017793 184 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-L-----GADE-T--AKVSTDIEDVDTDVGKIQNAM 253 (366)
Q Consensus 184 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-l-----g~~~-~--~~~~~~~~~~~~~~~~~~~~~ 253 (366)
+.++||.| +|++|...++.+...|. .|+.+++++++.+.+.+ + +... . .|+ ++..++...+.++...
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~- 78 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGR-DLALCARRTDRLEELKAELLARYPGIKVAVAALDV-NDHDQVFEVFAEFRDE- 78 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCC-CCHHHHHHHHHHHHHH-
Confidence 46799998 69999887777777788 67777777766543321 1 1111 1 122 2223333444433322
Q ss_pred CCCCcEEEEcCC
Q 017793 254 GSGIDVSFDCVG 265 (366)
Q Consensus 254 ~~~~d~vld~~g 265 (366)
-+++|+++.+.|
T Consensus 79 ~~~id~vi~~ag 90 (248)
T PRK08251 79 LGGLDRVIVNAG 90 (248)
T ss_pred cCCCCEEEECCC
Confidence 357999999886
No 495
>PRK12367 short chain dehydrogenase; Provisional
Probab=92.96 E-value=0.76 Score=40.25 Aligned_cols=74 Identities=23% Similarity=0.200 Sum_probs=43.5
Q ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCCCeEEEEcCCh-hHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEE
Q 017793 184 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDV-QRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF 261 (366)
Q Consensus 184 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~-~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl 261 (366)
+.++||.| +|++|...++.+...|+ .|+.+++++ +..+... .+....+.. +-.+.. .+.+. -+.+|+++
T Consensus 14 ~k~~lITGas~gIG~ala~~l~~~G~-~Vi~~~r~~~~~~~~~~-~~~~~~~~~--D~~~~~-~~~~~----~~~iDilV 84 (245)
T PRK12367 14 GKRIGITGASGALGKALTKAFRAKGA-KVIGLTHSKINNSESND-ESPNEWIKW--ECGKEE-SLDKQ----LASLDVLI 84 (245)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEECCchhhhhhhc-cCCCeEEEe--eCCCHH-HHHHh----cCCCCEEE
Confidence 57899998 68999998888888898 677776665 2222211 111112111 111221 22222 24699999
Q ss_pred EcCCC
Q 017793 262 DCVGF 266 (366)
Q Consensus 262 d~~g~ 266 (366)
++.|.
T Consensus 85 nnAG~ 89 (245)
T PRK12367 85 LNHGI 89 (245)
T ss_pred ECCcc
Confidence 99875
No 496
>cd02440 AdoMet_MTases S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). There are at least five structurally distinct families of AdoMet-MTases, class I being the largest and most diverse. Within this class enzymes can be classified by different substrate specificities (small molecules, lipids, nucleic acids, etc.) and different target atoms for methylation (nitrogen, oxygen, carbon, sulfur, etc.).
Probab=92.96 E-value=1.2 Score=32.02 Aligned_cols=91 Identities=23% Similarity=0.296 Sum_probs=54.7
Q ss_pred EEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH---cC-CceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793 187 VMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN---LG-ADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD 262 (366)
Q Consensus 187 vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~---lg-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld 262 (366)
++-.|+|. |....++++ .....+++++.+++..+.+++ .. ......+. .++..... ....++|+++.
T Consensus 2 ildig~G~-G~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~----~~~~~~d~i~~ 72 (107)
T cd02440 2 VLDLGCGT-GALALALAS-GPGARVTGVDISPVALELARKAAAALLADNVEVLK---GDAEELPP----EADESFDVIIS 72 (107)
T ss_pred eEEEcCCc-cHHHHHHhc-CCCCEEEEEeCCHHHHHHHHHHHhcccccceEEEE---cChhhhcc----ccCCceEEEEE
Confidence 45567765 777777777 444589999999887777662 11 11111111 12222111 12467999987
Q ss_pred cCCC-------hHHHHHHHHhhcCCceEEEE
Q 017793 263 CVGF-------DKTMSTALNATRPGGKVCLI 286 (366)
Q Consensus 263 ~~g~-------~~~~~~~~~~l~~~G~~v~~ 286 (366)
.... ...+....+.++++|.++..
T Consensus 73 ~~~~~~~~~~~~~~l~~~~~~l~~~g~~~~~ 103 (107)
T cd02440 73 DPPLHHLVEDLARFLEEARRLLKPGGVLVLT 103 (107)
T ss_pred ccceeehhhHHHHHHHHHHHHcCCCCEEEEE
Confidence 6543 33556677888999988754
No 497
>TIGR02072 BioC biotin biosynthesis protein BioC. This enzyme, which is found in biotin biosynthetic gene clusters in proteobacteria, firmicutes, green-sulfur bacteria, fusobacterium and bacteroides, is believed to carry out an enzymatic step prior to the formation of pimeloyl-CoA (although attribution of this annotation is not traceable). The enzyme appears related to methyltransferases by homology.
Probab=92.95 E-value=1.3 Score=38.17 Aligned_cols=96 Identities=19% Similarity=0.323 Sum_probs=60.2
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793 183 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD 262 (366)
Q Consensus 183 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld 262 (366)
.+.+||-+|+|. |.....+++......+++++.+++..+.+++...+.+..... +.. ... .....+|+|+.
T Consensus 34 ~~~~vLDlG~G~-G~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~---d~~----~~~-~~~~~fD~vi~ 104 (240)
T TIGR02072 34 IPASVLDIGCGT-GYLTRALLKRFPQAEFIALDISAGMLAQAKTKLSENVQFICG---DAE----KLP-LEDSSFDLIVS 104 (240)
T ss_pred CCCeEEEECCCc-cHHHHHHHHhCCCCcEEEEeChHHHHHHHHHhcCCCCeEEec---chh----hCC-CCCCceeEEEE
Confidence 346788888766 667777777654446899999988877776643321111111 111 110 01356999987
Q ss_pred cCC------ChHHHHHHHHhhcCCceEEEEc
Q 017793 263 CVG------FDKTMSTALNATRPGGKVCLIG 287 (366)
Q Consensus 263 ~~g------~~~~~~~~~~~l~~~G~~v~~g 287 (366)
... ....+..+.+.|+++|.++...
T Consensus 105 ~~~l~~~~~~~~~l~~~~~~L~~~G~l~~~~ 135 (240)
T TIGR02072 105 NLALQWCDDLSQALSELARVLKPGGLLAFST 135 (240)
T ss_pred hhhhhhccCHHHHHHHHHHHcCCCcEEEEEe
Confidence 542 2346677888999999988764
No 498
>PLN00203 glutamyl-tRNA reductase
Probab=92.94 E-value=0.7 Score=45.10 Aligned_cols=74 Identities=15% Similarity=0.325 Sum_probs=50.4
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEE
Q 017793 184 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD 262 (366)
Q Consensus 184 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld 262 (366)
+.+|+|+|+|.+|.+++..+...|+..|+++.++.++.+.+ .+++...+. + ..+. .+.+. -..+|+||.
T Consensus 266 ~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~-~----~~~~-dl~~a----l~~aDVVIs 335 (519)
T PLN00203 266 SARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEII-Y----KPLD-EMLAC----AAEADVVFT 335 (519)
T ss_pred CCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceE-e----ecHh-hHHHH----HhcCCEEEE
Confidence 67899999999999999999989987788888888876544 445421111 1 0111 11111 246899999
Q ss_pred cCCCh
Q 017793 263 CVGFD 267 (366)
Q Consensus 263 ~~g~~ 267 (366)
|.+.+
T Consensus 336 AT~s~ 340 (519)
T PLN00203 336 STSSE 340 (519)
T ss_pred ccCCC
Confidence 98764
No 499
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=92.94 E-value=0.33 Score=43.48 Aligned_cols=95 Identities=19% Similarity=0.246 Sum_probs=59.2
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEE
Q 017793 182 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS 260 (366)
Q Consensus 182 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v 260 (366)
..+.++||+|+|++|.+++..+...|+..|.++.++.++.+.+ ++++....+.+ . .+. .+ .-..+|+|
T Consensus 121 ~~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~--~~~----~~----~~~~~Div 189 (278)
T PRK00258 121 LKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-D--LEL----QE----ELADFDLI 189 (278)
T ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-c--ccc----hh----ccccCCEE
Confidence 3567899999999999999999999966888888888876544 34432110111 0 000 01 12569999
Q ss_pred EEcCCChHHH-----HHHHHhhcCCceEEEEc
Q 017793 261 FDCVGFDKTM-----STALNATRPGGKVCLIG 287 (366)
Q Consensus 261 ld~~g~~~~~-----~~~~~~l~~~G~~v~~g 287 (366)
++|.+..-.- ....+.+.++..++.+-
T Consensus 190 InaTp~g~~~~~~~~~~~~~~l~~~~~v~Div 221 (278)
T PRK00258 190 INATSAGMSGELPLPPLPLSLLRPGTIVYDMI 221 (278)
T ss_pred EECCcCCCCCCCCCCCCCHHHcCCCCEEEEee
Confidence 9998754110 11234566666666553
No 500
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=92.93 E-value=1.5 Score=39.54 Aligned_cols=94 Identities=17% Similarity=0.146 Sum_probs=53.6
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceeeecCCCCcchHHHHHHHHHhhCCCCcEEEEcCC
Q 017793 186 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVG 265 (366)
Q Consensus 186 ~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g 265 (366)
+|+|+|+|.+|.+....+...|. .|..+++++++.+.+++.|... . ................ ...+|++|-|+.
T Consensus 2 ~I~IiG~G~~G~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~g~~~--~-~~~~~~~~~~~~~~~~--~~~~d~vila~k 75 (304)
T PRK06522 2 KIAILGAGAIGGLFGAALAQAGH-DVTLVARRGAHLDALNENGLRL--E-DGEITVPVLAADDPAE--LGPQDLVILAVK 75 (304)
T ss_pred EEEEECCCHHHHHHHHHHHhCCC-eEEEEECChHHHHHHHHcCCcc--c-CCceeecccCCCChhH--cCCCCEEEEecc
Confidence 58999999999887777777787 5777777777777776655421 0 0000000000000111 257999999987
Q ss_pred ChHHHHHHHH----hhcCCceEEEE
Q 017793 266 FDKTMSTALN----ATRPGGKVCLI 286 (366)
Q Consensus 266 ~~~~~~~~~~----~l~~~G~~v~~ 286 (366)
... ....+. .+.++..++.+
T Consensus 76 ~~~-~~~~~~~l~~~l~~~~~iv~~ 99 (304)
T PRK06522 76 AYQ-LPAALPSLAPLLGPDTPVLFL 99 (304)
T ss_pred ccc-HHHHHHHHhhhcCCCCEEEEe
Confidence 543 233333 34444556554
Done!