Query 017795
Match_columns 366
No_of_seqs 325 out of 2171
Neff 8.2
Searched_HMMs 46136
Date Fri Mar 29 03:30:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017795.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017795hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PTZ00207 hypothetical protein; 100.0 7.8E-35 1.7E-39 296.2 19.1 292 1-358 259-563 (591)
2 PRK11273 glpT sn-glycerol-3-ph 99.6 3.3E-14 7.2E-19 142.3 23.7 194 132-360 249-448 (452)
3 PRK09556 uhpT sugar phosphate 99.6 2.8E-14 6E-19 143.4 22.6 188 132-347 254-449 (467)
4 PRK11663 regulatory protein Uh 99.6 1.3E-13 2.7E-18 137.4 23.5 185 132-349 239-426 (434)
5 PRK10504 putative transporter; 99.6 3.5E-14 7.5E-19 142.5 19.0 175 136-349 10-187 (471)
6 COG2814 AraJ Arabinose efflux 99.6 3.1E-14 6.6E-19 138.1 17.7 173 137-348 14-189 (394)
7 TIGR00890 2A0111 Oxalate/Forma 99.6 3.6E-14 7.7E-19 136.4 17.5 174 128-340 197-375 (377)
8 TIGR00892 2A0113 monocarboxyla 99.6 1.5E-13 3.2E-18 137.9 22.3 191 131-355 236-433 (455)
9 KOG2504 Monocarboxylate transp 99.6 3.9E-14 8.4E-19 143.4 18.1 182 130-347 292-476 (509)
10 PRK11663 regulatory protein Uh 99.6 8.4E-14 1.8E-18 138.6 19.3 174 136-348 23-199 (434)
11 TIGR00893 2A0114 d-galactonate 99.6 4.4E-13 9.5E-18 129.1 23.6 187 127-345 206-397 (399)
12 PRK03545 putative arabinose tr 99.6 7.9E-14 1.7E-18 136.5 18.3 172 138-348 11-185 (390)
13 TIGR02332 HpaX 4-hydroxyphenyl 99.6 7.5E-14 1.6E-18 138.2 17.9 180 137-349 9-191 (412)
14 COG2271 UhpC Sugar phosphate p 99.6 1.2E-13 2.6E-18 133.2 18.1 190 131-356 247-443 (448)
15 PRK14995 methyl viologen resis 99.6 1.1E-13 2.4E-18 140.3 18.7 173 138-349 8-184 (495)
16 PRK10213 nepI ribonucleoside t 99.6 1.5E-13 3.3E-18 135.1 18.8 156 148-342 32-190 (394)
17 PRK10091 MFS transport protein 99.6 1.5E-13 3.3E-18 134.3 18.0 173 136-347 3-178 (382)
18 PRK09705 cynX putative cyanate 99.5 2.2E-13 4.8E-18 133.8 18.4 185 129-352 198-386 (393)
19 PRK15403 multidrug efflux syst 99.5 2.7E-13 5.9E-18 134.2 18.2 162 149-349 29-193 (413)
20 TIGR00900 2A0121 H+ Antiporter 99.5 1.7E-13 3.7E-18 131.2 16.3 168 139-345 2-177 (365)
21 TIGR01299 synapt_SV2 synaptic 99.5 2.6E-13 5.5E-18 142.7 18.4 162 154-341 185-349 (742)
22 TIGR00710 efflux_Bcr_CflA drug 99.5 3.1E-13 6.7E-18 131.0 17.9 162 149-349 18-182 (385)
23 PRK11551 putative 3-hydroxyphe 99.5 3.3E-13 7.1E-18 132.5 18.2 172 138-347 222-396 (406)
24 TIGR00711 efflux_EmrB drug res 99.5 1.4E-13 3E-18 138.1 15.7 171 140-349 6-179 (485)
25 PF07690 MFS_1: Major Facilita 99.5 7.1E-14 1.5E-18 133.4 13.0 164 143-345 3-170 (352)
26 PRK10054 putative transporter; 99.5 4.3E-13 9.2E-18 132.0 18.7 173 137-349 8-184 (395)
27 TIGR00893 2A0114 d-galactonate 99.5 1.2E-13 2.6E-18 133.0 13.3 162 148-348 6-170 (399)
28 PRK11551 putative 3-hydroxyphe 99.5 1.1E-12 2.4E-17 128.8 20.2 171 140-349 19-192 (406)
29 PRK10473 multidrug efflux syst 99.5 1.1E-12 2.4E-17 128.4 18.6 168 143-349 10-180 (392)
30 TIGR00903 2A0129 major facilit 99.5 5.7E-13 1.2E-17 130.1 16.5 160 150-349 5-167 (368)
31 TIGR00890 2A0111 Oxalate/Forma 99.5 5.1E-13 1.1E-17 128.4 15.9 164 144-347 11-177 (377)
32 PRK03699 putative transporter; 99.5 2.2E-12 4.8E-17 126.6 20.4 179 135-353 204-386 (394)
33 COG2223 NarK Nitrate/nitrite t 99.5 4.2E-13 9.1E-18 129.4 14.7 184 129-351 211-405 (417)
34 TIGR00924 yjdL_sub1_fam amino 99.5 9.4E-13 2E-17 132.9 17.6 168 137-343 11-188 (475)
35 cd06174 MFS The Major Facilita 99.5 1.9E-12 4E-17 122.9 18.5 169 139-346 2-173 (352)
36 PRK03699 putative transporter; 99.5 2.2E-12 4.9E-17 126.6 19.5 169 136-342 7-178 (394)
37 PRK15402 multidrug efflux syst 99.5 1.8E-12 3.8E-17 127.6 18.8 159 151-348 28-189 (406)
38 TIGR00895 2A0115 benzoate tran 99.5 8.1E-13 1.8E-17 128.1 16.1 167 144-349 25-194 (398)
39 PRK11652 emrD multidrug resist 99.5 1.8E-12 4E-17 126.9 18.7 172 139-349 11-185 (394)
40 PRK12307 putative sialic acid 99.5 2.7E-12 5.9E-17 126.8 19.9 148 138-292 20-170 (426)
41 TIGR00889 2A0110 nucleoside tr 99.5 1.1E-12 2.4E-17 130.2 17.1 189 129-350 201-405 (418)
42 PRK05122 major facilitator sup 99.5 3.6E-12 7.7E-17 125.0 20.1 156 153-347 233-389 (399)
43 TIGR00891 2A0112 putative sial 99.5 3.4E-12 7.4E-17 124.3 19.8 148 138-292 14-164 (405)
44 TIGR00894 2A0114euk Na(+)-depe 99.5 2.3E-12 5E-17 129.2 19.0 193 127-350 252-453 (465)
45 PRK11102 bicyclomycin/multidru 99.5 1.1E-12 2.3E-17 127.4 15.8 159 152-349 7-168 (377)
46 PRK09874 drug efflux system pr 99.5 4.2E-12 9E-17 124.4 20.2 172 137-348 15-194 (408)
47 PRK09584 tppB putative tripept 99.5 3.6E-12 7.7E-17 129.5 19.8 173 132-343 16-197 (500)
48 PRK12382 putative transporter; 99.5 6.4E-12 1.4E-16 123.0 20.8 154 154-346 234-388 (392)
49 TIGR00712 glpT glycerol-3-phos 99.5 2.5E-12 5.4E-17 128.2 18.2 176 135-349 26-208 (438)
50 PRK15034 nitrate/nitrite trans 99.5 1.7E-12 3.7E-17 129.5 16.7 184 128-350 244-457 (462)
51 PRK15462 dipeptide/tripeptide 99.5 3E-12 6.6E-17 128.9 18.0 167 137-342 10-184 (493)
52 TIGR00712 glpT glycerol-3-phos 99.5 3E-12 6.5E-17 127.6 17.9 186 131-351 246-437 (438)
53 PLN00028 nitrate transmembrane 99.5 1.8E-12 3.8E-17 130.9 16.3 184 129-347 245-433 (476)
54 TIGR00892 2A0113 monocarboxyla 99.4 2.8E-12 6E-17 128.7 17.5 153 154-346 37-193 (455)
55 TIGR02332 HpaX 4-hydroxyphenyl 99.4 1.3E-12 2.8E-17 129.4 14.7 154 133-292 239-397 (412)
56 PRK03893 putative sialic acid 99.4 5.2E-12 1.1E-16 127.3 19.4 149 137-292 21-172 (496)
57 TIGR00886 2A0108 nitrite extru 99.4 3.1E-12 6.7E-17 123.4 17.0 146 137-290 2-152 (366)
58 TIGR00881 2A0104 phosphoglycer 99.4 5.7E-13 1.2E-17 128.1 11.6 165 145-348 4-172 (379)
59 TIGR00879 SP MFS transporter, 99.4 2.2E-12 4.7E-17 127.8 16.0 177 136-351 284-474 (481)
60 PRK11646 multidrug resistance 99.4 6.2E-12 1.3E-16 124.0 19.1 169 139-347 13-185 (400)
61 PRK09528 lacY galactoside perm 99.4 2.1E-12 4.5E-17 127.8 15.7 182 129-349 216-405 (420)
62 PRK10207 dipeptide/tripeptide 99.4 3.7E-12 8E-17 129.0 17.8 149 137-292 15-171 (489)
63 PLN00028 nitrate transmembrane 99.4 7.8E-12 1.7E-16 126.2 20.0 173 143-346 43-218 (476)
64 PRK03633 putative MFS family t 99.4 8.5E-12 1.8E-16 121.9 19.6 173 127-340 191-365 (381)
65 PRK09952 shikimate transporter 99.4 1.2E-11 2.6E-16 123.4 21.0 178 132-346 245-432 (438)
66 TIGR01299 synapt_SV2 synaptic 99.4 3.7E-12 8E-17 134.0 18.0 137 175-352 601-738 (742)
67 PRK11043 putative transporter; 99.4 6.1E-12 1.3E-16 123.5 18.5 161 147-346 17-180 (401)
68 TIGR00897 2A0118 polyol permea 99.4 1.2E-11 2.7E-16 121.8 20.7 181 129-346 215-400 (402)
69 TIGR00902 2A0127 phenyl propri 99.4 8.9E-12 1.9E-16 121.9 19.3 157 128-292 197-357 (382)
70 PRK10642 proline/glycine betai 99.4 2.7E-11 5.9E-16 122.6 23.2 158 128-292 240-406 (490)
71 PRK03545 putative arabinose tr 99.4 1.1E-11 2.5E-16 121.3 19.8 179 128-347 197-380 (390)
72 PF06609 TRI12: Fungal trichot 99.4 3.5E-12 7.5E-17 130.3 16.5 176 134-349 38-219 (599)
73 PRK11195 lysophospholipid tran 99.4 5.1E-12 1.1E-16 124.3 17.2 147 135-290 2-150 (393)
74 PRK11273 glpT sn-glycerol-3-ph 99.4 1.1E-11 2.3E-16 124.2 19.6 156 155-349 48-210 (452)
75 PRK09705 cynX putative cyanate 99.4 8E-12 1.7E-16 122.8 18.0 130 154-291 27-159 (393)
76 PRK10489 enterobactin exporter 99.4 5.6E-12 1.2E-16 124.6 16.9 174 132-344 13-194 (417)
77 PRK09556 uhpT sugar phosphate 99.4 3.5E-12 7.6E-17 128.2 15.6 168 143-346 36-211 (467)
78 COG2271 UhpC Sugar phosphate p 99.4 3E-12 6.4E-17 123.6 13.9 177 134-349 27-208 (448)
79 KOG2532 Permease of the major 99.4 4.7E-12 1E-16 126.8 16.0 192 125-347 247-447 (466)
80 PRK12382 putative transporter; 99.4 1.1E-11 2.3E-16 121.4 17.5 152 134-292 13-176 (392)
81 TIGR00903 2A0129 major facilit 99.4 2.2E-11 4.8E-16 119.0 19.2 176 129-344 185-362 (368)
82 TIGR00879 SP MFS transporter, 99.4 1E-11 2.2E-16 123.0 16.9 126 152-284 44-183 (481)
83 TIGR00899 2A0120 sugar efflux 99.4 2.5E-11 5.4E-16 117.4 19.0 176 129-344 192-371 (375)
84 TIGR00883 2A0106 metabolite-pr 99.4 1.7E-11 3.7E-16 118.5 17.8 160 127-292 208-377 (394)
85 TIGR00881 2A0104 phosphoglycer 99.4 2.1E-11 4.6E-16 117.2 18.2 160 129-292 209-374 (379)
86 PRK09874 drug efflux system pr 99.4 1E-11 2.2E-16 121.6 16.0 178 130-346 212-397 (408)
87 PRK10406 alpha-ketoglutarate t 99.4 5.9E-11 1.3E-15 118.1 21.4 180 128-346 234-423 (432)
88 PRK05122 major facilitator sup 99.4 2.4E-11 5.1E-16 119.1 17.7 149 137-292 16-176 (399)
89 PRK15034 nitrate/nitrite trans 99.4 2.4E-11 5.3E-16 121.3 17.9 187 135-348 33-233 (462)
90 TIGR00897 2A0118 polyol permea 99.4 2.4E-11 5.1E-16 119.7 17.2 149 138-292 15-170 (402)
91 cd06174 MFS The Major Facilita 99.4 3.1E-11 6.7E-16 114.5 17.5 170 136-344 175-349 (352)
92 PRK10489 enterobactin exporter 99.4 3.1E-11 6.8E-16 119.2 18.0 183 130-352 218-404 (417)
93 PRK10077 xylE D-xylose transpo 99.4 2.5E-11 5.3E-16 121.8 17.5 162 156-349 32-216 (479)
94 PRK10642 proline/glycine betai 99.4 5.8E-11 1.3E-15 120.2 20.0 144 138-288 18-178 (490)
95 TIGR00898 2A0119 cation transp 99.4 3.2E-11 6.9E-16 122.1 17.9 182 127-351 314-498 (505)
96 TIGR00792 gph sugar (Glycoside 99.4 7.7E-11 1.7E-15 116.7 20.3 157 129-292 215-382 (437)
97 PRK12307 putative sialic acid 99.3 4.4E-11 9.5E-16 118.2 18.4 158 128-292 220-385 (426)
98 TIGR00887 2A0109 phosphate:H+ 99.3 9.2E-12 2E-16 126.4 13.6 173 150-352 302-493 (502)
99 PRK03633 putative MFS family t 99.3 5.8E-11 1.2E-15 116.0 18.3 149 135-290 5-156 (381)
100 TIGR02718 sider_RhtX_FptX side 99.3 8.5E-11 1.8E-15 115.1 19.1 175 128-341 200-385 (390)
101 TIGR00896 CynX cyanate transpo 99.3 4.6E-11 1E-15 115.3 16.6 159 128-292 189-350 (355)
102 PRK10077 xylE D-xylose transpo 99.3 6E-11 1.3E-15 119.0 17.4 159 155-352 290-462 (479)
103 PF11700 ATG22: Vacuole efflux 99.3 1.9E-10 4.1E-15 115.9 20.8 183 129-346 274-467 (477)
104 TIGR00894 2A0114euk Na(+)-depe 99.3 1.8E-11 3.9E-16 122.8 13.2 144 165-347 70-219 (465)
105 TIGR00880 2_A_01_02 Multidrug 99.3 2.8E-11 6.1E-16 99.3 11.9 131 177-346 6-137 (141)
106 KOG1330 Sugar transporter/spin 99.3 2.1E-12 4.5E-17 125.7 5.7 175 139-351 36-213 (493)
107 TIGR00882 2A0105 oligosacchari 99.3 1.6E-10 3.6E-15 113.3 19.2 179 128-345 207-393 (396)
108 TIGR00899 2A0120 sugar efflux 99.3 9.7E-11 2.1E-15 113.2 17.1 165 146-348 7-177 (375)
109 PRK11128 putative 3-phenylprop 99.3 2.1E-10 4.7E-15 112.1 19.6 158 127-292 196-357 (382)
110 PRK10406 alpha-ketoglutarate t 99.3 1.7E-10 3.7E-15 114.8 19.0 137 144-287 30-183 (432)
111 PRK15011 sugar efflux transpor 99.3 2.7E-10 5.9E-15 111.8 20.2 157 148-344 228-388 (393)
112 TIGR01272 gluP glucose/galacto 99.3 1.9E-10 4E-15 109.8 18.3 153 131-292 135-292 (310)
113 PRK09952 shikimate transporter 99.3 4.1E-10 8.8E-15 112.4 21.5 145 138-289 24-186 (438)
114 TIGR00885 fucP L-fucose:H+ sym 99.3 2.5E-10 5.5E-15 113.1 19.2 145 138-289 5-155 (410)
115 TIGR00900 2A0121 H+ Antiporter 99.3 1.6E-10 3.5E-15 110.6 17.1 157 129-292 203-365 (365)
116 PRK15075 citrate-proton sympor 99.3 3E-10 6.5E-15 113.1 19.4 154 132-292 233-396 (434)
117 TIGR00882 2A0105 oligosacchari 99.3 1.3E-10 2.8E-15 114.0 16.6 172 135-345 1-181 (396)
118 PRK10091 MFS transport protein 99.3 2.8E-10 6E-15 111.3 18.7 177 130-346 193-375 (382)
119 PRK09528 lacY galactoside perm 99.3 9.9E-11 2.2E-15 115.8 15.5 173 132-346 6-190 (420)
120 KOG4686 Predicted sugar transp 99.3 1.5E-10 3.2E-15 106.4 14.7 151 135-292 263-416 (459)
121 TIGR00895 2A0115 benzoate tran 99.3 8.6E-11 1.9E-15 113.9 13.9 144 137-287 251-397 (398)
122 PRK03893 putative sialic acid 99.2 1.7E-10 3.6E-15 116.4 16.1 132 154-292 293-430 (496)
123 PRK11010 ampG muropeptide tran 99.2 9.4E-10 2E-14 111.6 21.4 182 129-346 215-402 (491)
124 TIGR00896 CynX cyanate transpo 99.2 1.7E-10 3.7E-15 111.4 15.2 131 154-292 18-150 (355)
125 TIGR00891 2A0112 putative sial 99.2 4.3E-10 9.4E-15 109.5 18.1 132 154-292 256-392 (405)
126 PRK10504 putative transporter; 99.2 5.9E-10 1.3E-14 111.9 19.5 155 131-292 256-417 (471)
127 PRK11010 ampG muropeptide tran 99.2 1E-09 2.2E-14 111.3 21.3 170 137-345 13-193 (491)
128 PTZ00207 hypothetical protein; 99.2 7.4E-10 1.6E-14 113.7 19.7 154 152-347 43-205 (591)
129 TIGR00887 2A0109 phosphate:H+ 99.2 8.7E-10 1.9E-14 111.9 19.7 109 174-289 61-176 (502)
130 PRK15075 citrate-proton sympor 99.2 5.8E-10 1.3E-14 111.0 18.1 144 138-288 17-177 (434)
131 COG2814 AraJ Arabinose efflux 99.2 1.1E-09 2.3E-14 106.6 19.1 180 128-348 203-387 (394)
132 TIGR00898 2A0119 cation transp 99.2 8.6E-11 1.9E-15 118.9 12.0 145 157-343 110-260 (505)
133 TIGR00806 rfc RFC reduced fola 99.2 7E-10 1.5E-14 110.0 17.6 161 155-353 45-209 (511)
134 TIGR00805 oat sodium-independe 99.2 9.6E-11 2.1E-15 122.2 12.2 133 152-291 49-235 (633)
135 PRK10133 L-fucose transporter; 99.2 1.7E-09 3.6E-14 108.2 20.4 145 137-288 27-177 (438)
136 PRK06814 acylglycerophosphoeth 99.2 5.6E-10 1.2E-14 124.0 18.3 159 131-292 6-172 (1140)
137 COG2807 CynX Cyanate permease 99.2 2E-09 4.3E-14 102.4 19.0 180 128-344 200-382 (395)
138 PRK15011 sugar efflux transpor 99.2 1.6E-09 3.5E-14 106.4 19.1 176 135-349 14-196 (393)
139 PRK10213 nepI ribonucleoside t 99.2 3.4E-09 7.3E-14 104.3 20.8 157 128-292 208-368 (394)
140 KOG3764 Vesicular amine transp 99.2 1E-10 2.2E-15 112.1 9.5 139 174-351 111-251 (464)
141 PRK10054 putative transporter; 99.2 5.5E-10 1.2E-14 110.0 14.7 156 129-292 199-361 (395)
142 TIGR00902 2A0127 phenyl propri 99.2 1.6E-09 3.4E-14 106.1 17.6 147 139-292 7-156 (382)
143 PRK08633 2-acyl-glycerophospho 99.2 9.5E-10 2.1E-14 122.0 17.9 152 132-290 5-165 (1146)
144 COG3104 PTR2 Dipeptide/tripept 99.2 4.8E-10 1E-14 110.6 13.7 170 138-346 23-205 (498)
145 PRK15402 multidrug efflux syst 99.2 3E-09 6.4E-14 104.7 19.5 156 129-292 208-372 (406)
146 PRK11902 ampG muropeptide tran 99.1 2.6E-09 5.6E-14 105.2 18.4 153 151-342 14-177 (402)
147 PRK11646 multidrug resistance 99.1 3.2E-09 7E-14 104.7 18.4 158 128-292 200-361 (400)
148 PRK11128 putative 3-phenylprop 99.1 1.7E-09 3.6E-14 105.8 16.2 133 153-292 21-156 (382)
149 PRK10429 melibiose:sodium symp 99.1 4.4E-09 9.6E-14 106.0 19.4 155 131-292 226-395 (473)
150 TIGR00901 2A0125 AmpG-related 99.1 3.2E-09 7E-14 102.4 17.6 167 155-347 7-178 (356)
151 KOG2533 Permease of the major 99.1 2E-09 4.3E-14 108.5 16.3 137 127-264 264-404 (495)
152 PF05977 MFS_3: Transmembrane 99.1 3.1E-09 6.6E-14 108.3 17.5 155 131-292 5-167 (524)
153 PRK06814 acylglycerophosphoeth 99.1 4.1E-09 9E-14 117.1 19.6 156 129-291 218-397 (1140)
154 PRK10133 L-fucose transporter; 99.1 5.4E-09 1.2E-13 104.5 18.3 155 129-292 251-409 (438)
155 COG2223 NarK Nitrate/nitrite t 99.1 1.6E-09 3.5E-14 104.8 13.5 174 137-348 15-194 (417)
156 PRK11902 ampG muropeptide tran 99.1 1.8E-08 3.8E-13 99.3 21.4 176 128-343 201-386 (402)
157 KOG0255 Synaptic vesicle trans 99.1 9.5E-10 2.1E-14 112.1 12.6 127 174-342 123-250 (521)
158 PRK09848 glucuronide transport 99.1 2.8E-09 6.1E-14 106.5 15.8 157 129-292 221-390 (448)
159 TIGR00885 fucP L-fucose:H+ sym 99.1 6.5E-09 1.4E-13 103.0 18.1 156 128-292 224-383 (410)
160 COG2270 Permeases of the major 99.1 2.9E-09 6.3E-14 103.2 14.5 181 129-347 245-429 (438)
161 PRK09669 putative symporter Ya 99.1 6.4E-09 1.4E-13 103.8 17.7 157 129-292 222-390 (444)
162 PRK08633 2-acyl-glycerophospho 99.1 1.2E-08 2.6E-13 113.3 20.9 154 129-289 225-383 (1146)
163 KOG0569 Permease of the major 99.0 1.8E-08 4E-13 100.8 19.5 190 125-354 254-461 (485)
164 TIGR00710 efflux_Bcr_CflA drug 99.0 7.5E-09 1.6E-13 100.3 16.4 152 129-288 199-359 (385)
165 TIGR00711 efflux_EmrB drug res 99.0 6.3E-09 1.4E-13 104.4 16.2 155 130-291 249-411 (485)
166 TIGR00883 2A0106 metabolite-pr 99.0 1.3E-08 2.8E-13 98.3 16.9 103 180-289 46-157 (394)
167 PF03825 Nuc_H_symport: Nucleo 99.0 2.5E-08 5.5E-13 98.4 19.2 159 128-293 199-367 (400)
168 PRK14995 methyl viologen resis 99.0 1.9E-08 4.2E-13 102.0 18.8 155 130-291 253-414 (495)
169 PF01306 LacY_symp: LacY proto 99.0 1.8E-07 3.9E-12 92.0 23.9 183 129-350 213-403 (412)
170 PRK11043 putative transporter; 99.0 3.3E-08 7.3E-13 97.0 19.0 159 128-291 195-358 (401)
171 KOG0254 Predicted transporter 99.0 1.3E-08 2.7E-13 103.8 16.3 137 173-348 93-230 (513)
172 PF13347 MFS_2: MFS/sugar tran 99.0 1.5E-08 3.2E-13 100.7 15.9 159 127-292 216-386 (428)
173 PF07690 MFS_1: Major Facilita 98.9 5.9E-09 1.3E-13 99.3 11.3 149 129-281 199-352 (352)
174 TIGR01301 GPH_sucrose GPH fami 98.9 5.3E-08 1.2E-12 98.0 18.2 176 150-350 18-221 (477)
175 TIGR00886 2A0108 nitrite extru 98.9 2.2E-08 4.8E-13 96.4 14.4 141 129-276 218-366 (366)
176 PRK10473 multidrug efflux syst 98.9 6.5E-08 1.4E-12 94.6 17.7 151 129-292 196-351 (392)
177 KOG2615 Permease of the major 98.9 4.9E-09 1.1E-13 100.2 9.1 108 174-289 73-181 (451)
178 TIGR02718 sider_RhtX_FptX side 98.9 1.1E-07 2.4E-12 93.1 18.0 170 140-347 5-184 (390)
179 KOG2532 Permease of the major 98.9 8.3E-09 1.8E-13 103.6 9.8 144 166-348 68-217 (466)
180 PRK11102 bicyclomycin/multidru 98.9 1.2E-07 2.5E-12 92.0 17.1 149 129-285 187-344 (377)
181 TIGR00792 gph sugar (Glycoside 98.8 4.5E-08 9.7E-13 96.9 13.9 166 157-349 20-196 (437)
182 TIGR00901 2A0125 AmpG-related 98.8 9.2E-08 2E-12 92.2 15.2 138 130-273 200-355 (356)
183 PRK11462 putative transporter; 98.8 2.7E-07 5.9E-12 92.9 19.1 157 130-292 222-389 (460)
184 KOG0253 Synaptic vesicle trans 98.8 7E-08 1.5E-12 92.0 13.6 137 175-352 387-524 (528)
185 COG0738 FucP Fucose permease [ 98.8 3.2E-07 7E-12 88.6 17.8 156 128-292 228-386 (422)
186 PF05977 MFS_3: Transmembrane 98.8 3.9E-07 8.4E-12 93.0 19.2 152 134-292 216-371 (524)
187 KOG2504 Monocarboxylate transp 98.8 4.7E-08 1E-12 99.3 12.1 152 157-348 67-222 (509)
188 PRK11652 emrD multidrug resist 98.8 4.1E-07 8.9E-12 89.0 17.5 155 129-290 200-360 (394)
189 PRK11195 lysophospholipid tran 98.7 6.7E-07 1.5E-11 88.0 18.7 129 155-292 224-357 (393)
190 COG2211 MelB Na+/melibiose sym 98.7 4.5E-07 9.7E-12 90.2 16.5 155 131-292 231-398 (467)
191 COG2807 CynX Cyanate permease 98.7 9.8E-07 2.1E-11 84.2 17.6 154 154-346 30-185 (395)
192 KOG2533 Permease of the major 98.7 1.5E-07 3.3E-12 95.0 12.9 153 164-348 74-228 (495)
193 TIGR00788 fbt folate/biopterin 98.7 8.5E-07 1.8E-11 89.5 16.5 174 138-349 28-210 (468)
194 KOG0252 Inorganic phosphate tr 98.6 3.9E-07 8.5E-12 89.2 11.8 108 174-288 89-204 (538)
195 PRK09669 putative symporter Ya 98.6 1.5E-06 3.3E-11 86.8 14.9 163 157-346 30-203 (444)
196 KOG3764 Vesicular amine transp 98.5 1E-06 2.3E-11 84.9 12.9 183 126-346 260-453 (464)
197 KOG0252 Inorganic phosphate tr 98.5 1.9E-07 4.1E-12 91.4 7.6 176 143-353 311-503 (538)
198 COG0738 FucP Fucose permease [ 98.5 5.3E-06 1.1E-10 80.3 15.9 130 154-290 31-166 (422)
199 TIGR00924 yjdL_sub1_fam amino 98.5 2.6E-05 5.7E-10 78.9 21.4 143 174-349 317-470 (475)
200 KOG0569 Permease of the major 98.4 3.5E-06 7.6E-11 84.5 13.7 101 174-281 65-169 (485)
201 TIGR00889 2A0110 nucleoside tr 98.4 4.8E-06 1E-10 82.7 14.5 121 155-287 21-153 (418)
202 PRK15403 multidrug efflux syst 98.4 3.1E-05 6.7E-10 76.8 20.0 158 129-290 211-373 (413)
203 TIGR00926 2A1704 Peptide:H+ sy 98.4 6.6E-06 1.4E-10 86.1 15.8 150 163-345 15-180 (654)
204 PF00083 Sugar_tr: Sugar (and 98.4 4E-10 8.7E-15 112.2 -15.8 161 155-354 272-443 (451)
205 PF01306 LacY_symp: LacY proto 98.4 4.5E-06 9.7E-11 82.2 12.5 153 133-291 4-165 (412)
206 PF13347 MFS_2: MFS/sugar tran 98.3 2.7E-06 5.8E-11 84.6 10.5 160 159-349 25-200 (428)
207 PRK10429 melibiose:sodium symp 98.3 1.5E-05 3.3E-10 80.4 15.9 131 155-287 25-166 (473)
208 PF03209 PUCC: PUCC protein; 98.3 4.3E-05 9.3E-10 74.5 18.1 190 129-346 201-397 (403)
209 PRK11462 putative transporter; 98.3 2.6E-05 5.6E-10 78.6 17.2 134 157-291 30-173 (460)
210 PF05631 DUF791: Protein of un 98.3 3.6E-05 7.8E-10 73.8 16.9 124 162-292 60-191 (354)
211 PF00083 Sugar_tr: Sugar (and 98.3 6.3E-09 1.4E-13 103.7 -9.4 103 174-283 51-157 (451)
212 TIGR00788 fbt folate/biopterin 98.2 7.1E-06 1.5E-10 82.8 11.1 122 164-292 281-415 (468)
213 TIGR01301 GPH_sucrose GPH fami 98.2 4.7E-05 1E-09 76.8 16.7 184 136-351 258-475 (477)
214 PRK10207 dipeptide/tripeptide 98.2 0.00018 3.8E-09 73.2 20.4 153 174-349 314-478 (489)
215 PRK09848 glucuronide transport 98.2 7.5E-05 1.6E-09 74.6 16.9 112 160-271 33-154 (448)
216 PRK09584 tppB putative tripept 98.2 0.00017 3.6E-09 73.5 19.3 154 174-353 321-485 (500)
217 KOG3762 Predicted transporter 98.1 1.7E-05 3.7E-10 79.2 11.1 176 131-346 366-546 (618)
218 PF06813 Nodulin-like: Nodulin 98.1 0.0001 2.2E-09 68.0 15.2 126 149-282 15-150 (250)
219 PF03825 Nuc_H_symport: Nucleo 98.1 0.00016 3.5E-09 71.5 17.0 117 155-276 21-142 (400)
220 PF03209 PUCC: PUCC protein; 98.1 0.0001 2.2E-09 71.9 14.6 128 163-292 7-153 (403)
221 KOG2563 Permease of the major 98.1 4E-05 8.6E-10 75.3 11.8 159 127-291 257-422 (480)
222 KOG0254 Predicted transporter 98.0 5E-05 1.1E-09 77.5 12.3 181 135-354 294-490 (513)
223 KOG0255 Synaptic vesicle trans 98.0 0.00099 2.1E-08 67.9 21.3 101 181-288 362-466 (521)
224 KOG2816 Predicted transporter 97.9 5.7E-05 1.2E-09 75.9 10.1 131 179-352 72-204 (463)
225 COG0477 ProP Permeases of the 97.9 0.00087 1.9E-08 60.8 17.2 129 155-290 21-158 (338)
226 PF03092 BT1: BT1 family; Int 97.9 0.00027 5.8E-09 70.7 14.8 159 157-349 11-177 (433)
227 COG2211 MelB Na+/melibiose sym 97.9 0.00042 9.2E-09 69.2 15.9 136 156-292 32-177 (467)
228 KOG0253 Synaptic vesicle trans 97.9 0.00036 7.7E-09 67.2 14.0 132 174-346 118-250 (528)
229 PF06609 TRI12: Fungal trichot 97.9 0.00098 2.1E-08 68.8 18.3 155 129-289 302-466 (599)
230 KOG2325 Predicted transporter/ 97.8 0.00017 3.7E-09 72.2 12.1 186 138-350 36-232 (488)
231 KOG1330 Sugar transporter/spin 97.6 0.00016 3.5E-09 71.3 7.7 138 154-292 262-414 (493)
232 TIGR00805 oat sodium-independe 97.6 0.0017 3.7E-08 68.1 15.8 72 128-199 322-397 (633)
233 PF05978 UNC-93: Ion channel r 97.4 0.0055 1.2E-07 52.4 13.1 108 174-288 42-149 (156)
234 PRK03612 spermidine synthase; 97.3 0.033 7.2E-07 57.1 20.2 142 146-292 24-174 (521)
235 PF11700 ATG22: Vacuole efflux 97.2 0.026 5.5E-07 57.3 18.0 145 174-349 75-249 (477)
236 PF12832 MFS_1_like: MFS_1 lik 97.2 0.0018 4E-08 48.5 7.2 53 150-202 14-68 (77)
237 PRK15462 dipeptide/tripeptide 97.2 0.087 1.9E-06 53.6 21.4 119 167-286 305-436 (493)
238 PF00854 PTR2: POT family; In 97.1 0.0026 5.7E-08 62.0 9.9 102 209-343 5-119 (372)
239 KOG2615 Permease of the major 97.1 0.0055 1.2E-07 59.4 11.0 124 164-292 290-416 (451)
240 KOG4686 Predicted sugar transp 97.0 0.00042 9.1E-09 64.5 2.6 148 137-292 42-200 (459)
241 TIGR01272 gluP glucose/galacto 96.6 0.018 3.9E-07 54.8 10.3 64 226-290 9-72 (310)
242 KOG3626 Organic anion transpor 96.5 0.064 1.4E-06 56.5 14.8 69 128-196 384-456 (735)
243 PF03137 OATP: Organic Anion T 96.4 0.0008 1.7E-08 69.1 0.0 72 126-197 295-370 (539)
244 PF03137 OATP: Organic Anion T 96.4 0.00065 1.4E-08 69.8 -1.1 173 155-349 22-252 (539)
245 TIGR00769 AAA ADP/ATP carrier 96.4 0.22 4.8E-06 50.3 17.0 45 244-289 145-190 (472)
246 COG2270 Permeases of the major 96.2 0.058 1.3E-06 53.1 11.4 152 174-349 63-222 (438)
247 PF02487 CLN3: CLN3 protein; 96.1 0.44 9.6E-06 47.0 17.0 103 174-285 286-392 (402)
248 KOG2563 Permease of the major 96.0 0.13 2.7E-06 51.2 12.8 109 174-290 84-202 (480)
249 KOG3098 Uncharacterized conser 96.0 0.86 1.9E-05 45.9 18.9 142 131-277 235-402 (461)
250 PF01770 Folate_carrier: Reduc 95.9 0.94 2E-05 44.9 18.6 94 174-271 290-384 (412)
251 PF06963 FPN1: Ferroportin1 (F 95.8 1.5 3.3E-05 43.8 19.9 189 138-359 4-212 (432)
252 COG3104 PTR2 Dipeptide/tripept 95.8 0.68 1.5E-05 46.7 17.2 120 166-286 320-452 (498)
253 TIGR00939 2a57 Equilibrative N 95.6 0.16 3.4E-06 51.0 11.9 103 174-281 312-425 (437)
254 KOG3626 Organic anion transpor 95.5 0.052 1.1E-06 57.2 8.5 174 154-350 115-346 (735)
255 KOG2816 Predicted transporter 95.3 0.19 4.2E-06 50.7 11.4 120 165-292 271-394 (463)
256 PF07672 MFS_Mycoplasma: Mycop 95.2 1.4 3E-05 40.9 15.6 141 127-268 85-247 (267)
257 PF01770 Folate_carrier: Reduc 94.9 0.95 2.1E-05 44.8 14.7 149 166-352 35-187 (412)
258 KOG2325 Predicted transporter/ 94.8 0.15 3.2E-06 51.5 8.9 83 237-352 398-480 (488)
259 PF03092 BT1: BT1 family; Int 94.7 0.84 1.8E-05 45.6 14.3 116 174-292 256-382 (433)
260 KOG1237 H+/oligopeptide sympor 94.0 0.54 1.2E-05 48.7 11.3 150 157-345 59-243 (571)
261 KOG3574 Acetyl-CoA transporter 93.3 0.69 1.5E-05 45.3 9.8 136 139-281 34-186 (510)
262 KOG0637 Sucrose transporter an 93.0 0.24 5.1E-06 49.4 6.5 125 155-281 51-196 (498)
263 KOG3098 Uncharacterized conser 92.5 0.37 8E-06 48.4 7.1 102 174-282 55-156 (461)
264 PF06963 FPN1: Ferroportin1 (F 90.7 3.8 8.3E-05 41.0 12.1 156 128-289 251-416 (432)
265 PF06779 DUF1228: Protein of u 90.5 1.5 3.2E-05 33.4 7.0 66 152-223 8-75 (85)
266 PF03219 TLC: TLC ATP/ADP tran 90.1 17 0.00037 37.0 16.4 42 247-289 164-205 (491)
267 KOG4332 Predicted sugar transp 89.7 0.64 1.4E-05 43.5 5.3 92 163-260 64-158 (454)
268 PF01733 Nucleoside_tran: Nucl 89.1 0.14 3.1E-06 48.7 0.5 99 174-277 187-298 (309)
269 PF13000 Acatn: Acetyl-coenzym 89.0 29 0.00063 35.4 21.4 99 240-344 418-522 (544)
270 KOG3762 Predicted transporter 88.8 0.47 1E-05 48.3 4.0 48 155-202 30-79 (618)
271 KOG1479 Nucleoside transporter 88.1 25 0.00055 34.8 15.4 127 137-265 19-154 (406)
272 KOG3810 Micronutrient transpor 86.8 13 0.00029 36.1 12.1 91 177-271 279-370 (433)
273 TIGR00806 rfc RFC reduced fola 85.3 16 0.00036 37.1 12.6 94 174-271 303-397 (511)
274 PF05631 DUF791: Protein of un 82.4 51 0.0011 32.1 15.9 66 134-199 117-189 (354)
275 COG4262 Predicted spermidine s 82.2 53 0.0011 32.2 16.3 116 139-254 10-132 (508)
276 PF11947 DUF3464: Protein of u 81.0 5 0.00011 34.1 6.0 33 245-277 112-144 (153)
277 TIGR00939 2a57 Equilibrative N 71.7 69 0.0015 32.1 12.4 43 230-277 109-151 (437)
278 PF02487 CLN3: CLN3 protein; 70.6 46 0.001 33.0 10.6 70 209-284 93-163 (402)
279 PRK10263 DNA translocase FtsK; 67.7 65 0.0014 36.7 11.9 18 274-292 142-159 (1355)
280 COG1079 Uncharacterized ABC-ty 65.4 1.3E+02 0.0028 28.7 12.8 94 183-286 21-116 (304)
281 KOG2601 Iron transporter [Inor 64.4 91 0.002 30.9 10.8 14 279-292 190-203 (503)
282 COG3619 Predicted membrane pro 58.8 1.4E+02 0.0031 27.1 19.3 41 157-197 41-83 (226)
283 PF06813 Nodulin-like: Nodulin 58.1 74 0.0016 29.3 8.9 27 264-292 38-64 (250)
284 PF13000 Acatn: Acetyl-coenzym 56.8 32 0.0007 35.1 6.6 142 140-284 4-174 (544)
285 KOG4332 Predicted sugar transp 53.7 2E+02 0.0044 27.3 10.8 43 229-271 346-388 (454)
286 PF03547 Mem_trans: Membrane t 53.7 1.3E+02 0.0028 29.1 10.5 22 129-150 238-259 (385)
287 KOG1479 Nucleoside transporter 52.7 32 0.00069 34.1 5.8 97 174-275 287-391 (406)
288 PF12832 MFS_1_like: MFS_1 lik 52.3 92 0.002 22.9 8.2 30 262-292 34-63 (77)
289 PF02990 EMP70: Endomembrane p 50.8 1.1E+02 0.0023 31.5 9.6 55 142-196 263-320 (521)
290 COG5336 Uncharacterized protei 48.6 47 0.001 26.4 5.0 19 180-198 53-71 (116)
291 PTZ00370 STEVOR; Provisional 48.5 56 0.0012 30.7 6.3 33 325-357 257-289 (296)
292 COG3202 ATP/ADP translocase [E 47.0 3.4E+02 0.0073 27.8 18.0 42 247-289 168-209 (509)
293 COG4603 ABC-type uncharacteriz 46.1 3E+02 0.0064 26.9 11.6 32 229-260 113-144 (356)
294 COG5336 Uncharacterized protei 43.7 58 0.0013 25.9 4.8 31 261-292 40-70 (116)
295 COG1288 Predicted membrane pro 43.5 3.5E+02 0.0076 27.3 11.2 15 24-38 159-173 (481)
296 PF14851 FAM176: FAM176 family 42.3 55 0.0012 27.8 4.9 29 13-41 19-47 (153)
297 PF06912 DUF1275: Protein of u 36.9 2.9E+02 0.0063 24.2 19.3 20 273-292 171-190 (209)
298 KOG3574 Acetyl-CoA transporter 36.1 3.5E+02 0.0076 27.1 9.9 50 242-292 384-433 (510)
299 KOG3880 Predicted small molecu 36.1 4.2E+02 0.009 25.8 10.6 101 174-283 293-397 (409)
300 TIGR00769 AAA ADP/ATP carrier 35.7 4.9E+02 0.011 26.5 21.8 46 246-292 285-331 (472)
301 PHA03237 envelope glycoprotein 31.2 5.3E+02 0.012 25.8 10.5 40 231-270 255-298 (424)
302 TIGR00880 2_A_01_02 Multidrug 31.0 2.4E+02 0.0052 21.5 7.8 25 174-198 92-116 (141)
303 PF02990 EMP70: Endomembrane p 30.9 1.6E+02 0.0035 30.2 7.2 10 280-289 313-322 (521)
304 COG4298 Uncharacterized protei 28.2 2.4E+02 0.0051 21.4 5.7 37 324-360 42-78 (95)
305 KOG0637 Sucrose transporter an 28.0 2.7E+02 0.0059 28.3 7.8 31 261-292 442-472 (498)
306 PHA02844 putative transmembran 27.9 1.5E+02 0.0033 21.8 4.5 30 317-346 38-67 (75)
307 PHA02819 hypothetical protein; 27.8 1.6E+02 0.0035 21.4 4.6 30 317-346 36-65 (71)
308 PF01102 Glycophorin_A: Glycop 25.9 1E+02 0.0023 25.1 3.8 14 327-340 69-82 (122)
309 PF12805 FUSC-like: FUSC-like 25.1 5.5E+02 0.012 23.8 11.8 25 328-352 76-100 (284)
310 PHA03242 envelope glycoprotein 24.7 6.7E+02 0.015 25.1 9.9 40 232-271 253-296 (428)
311 TIGR01666 YCCS hypothetical me 24.3 9.1E+02 0.02 26.0 12.2 33 209-241 61-95 (704)
312 TIGR01478 STEVOR variant surfa 23.1 1.1E+02 0.0023 28.8 3.8 31 325-355 261-291 (295)
313 PF11947 DUF3464: Protein of u 22.8 2.2E+02 0.0047 24.2 5.3 25 174-198 101-125 (153)
314 PRK14984 high-affinity glucona 22.1 7.8E+02 0.017 24.8 10.0 15 174-188 61-75 (438)
315 KOG3097 Predicted membrane pro 20.9 3.2E+02 0.0069 26.7 6.5 59 184-252 73-135 (390)
316 TIGR01667 YCCS_YHJK integral m 20.4 1.1E+03 0.023 25.4 12.2 33 209-241 61-95 (701)
No 1
>PTZ00207 hypothetical protein; Provisional
Probab=100.00 E-value=7.8e-35 Score=296.23 Aligned_cols=292 Identities=20% Similarity=0.299 Sum_probs=229.3
Q ss_pred CeEEeeeccccccchHHHHHHHHHHH-HHHHhh-hhhhhhcccccCCCCCcccccccccCcCcCCCccchhhhhhhcccc
Q 017795 1 MLAVLLLEDLEVANQNVLTVLAVGLI-IIILLP-VTIPVVLVFFTEPPPPVEETLLAETNKGEASKSEDYQEEVILSEVE 78 (366)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~ll~~p-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (366)
|++.+++++.+.+++..+...+++++ +++++| ++++++. +.+.++++ + ++. + . .+ +
T Consensus 259 l~~~~~~~~~~~~~~~~~~~~~~v~~~lll~~p~l~ip~~~-~~~~~~~~--~-----~~~---~----~-~~------~ 316 (591)
T PTZ00207 259 LPLQGALVAYLKLGSNFKVGFAVTVIVLTVIFPFMAFPLTT-FDGKRPHD--D-----SDG---K----A-KE------H 316 (591)
T ss_pred HHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhhhHHH-hccCCcCC--C-----ccc---c----c-cc------c
Confidence 34567888999999999999999888 888889 8877765 22211100 0 000 0 0 00 0
Q ss_pred CCCCCCCCCCCchhHHHHHHHHHHHHHHHhhhhhhhhhhc-CCCCCCCCCCHHHHhhhhHHHHHHHHHHHhhhhHHHHHh
Q 017795 79 DEKPPEVDSLPASERQKRIAHLQAKLFQAAAEGAVRVKRR-KGPRRGEDFTLPQALMKADFLLLFFSLVLASGSGLTVID 157 (366)
Q Consensus 79 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~ 157 (366)
.+...+. ..++.+ ....+.+ ..|+.++ +++|++++.|||++++.++|+.++++++++
T Consensus 317 ~~~~~~~-~~~~~~-------------------~~~~~~~~~~P~~~~--t~~q~l~~~d~Wll~~~~~cg~g~gl~~~~ 374 (591)
T PTZ00207 317 VEAGEEV-SAAEDK-------------------VVETDVDYIAPQFQE--TFIEGLKTARLWCLLWSIFCCVGAHFVIIF 374 (591)
T ss_pred ccccccc-cccccc-------------------cccccccCCCCCCcc--hHHHHHhchhHHHHHHHHHHhhCchheeee
Confidence 0000000 000000 0000111 2244444 999999999999999999999999999999
Q ss_pred cHHHHHHHh-CC-Chh--HH-HHHHHHHHHhhhhhhhhhhhhhhhhhcc----CchhHHHHHHHHHHHHHHHHHHhcch-
Q 017795 158 NLGQICQSL-GY-ADT--SI-YVSMISIWNFLGRVGGGYFSEAIVRKFA----YPRPVAMAVAQVVMAFALLYYAIGWP- 227 (366)
Q Consensus 158 ~l~~i~~~~-g~-~~~--~~-~~sl~~i~~~~g~~~~G~lsD~~grr~~----~~R~~~~~~~~~~~~~~~~l~~~~~~- 227 (366)
|+.||.+++ |+ .+. .+ ++++.++|+++||++.|+++ .+.+|+. +||+.++++.++ +++++++++...+
T Consensus 375 N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~-~~~~~~~~~~r~prt~~l~~~~~-~~~~~lll~~~~p~ 452 (591)
T PTZ00207 375 NARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFE-IWSQKRRAEDRVPITIALFIPSV-CIITMLTLFLTLPK 452 (591)
T ss_pred cHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHH-HHHHhhccccccchhHHHHHHHH-HHHHHHHHHHHCCc
Confidence 999999999 88 333 34 89999999999999999998 5544444 899999999999 8888888886666
Q ss_pred hHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhhhhhhhhhhhccCCCC
Q 017795 228 GEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNML 307 (366)
Q Consensus 228 ~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~~~~~~~~~~~~~~~~ 307 (366)
..+++..+++|+|+|++|++.+++++|+|+ |++|+.||+..++.++|+++++..++|.+||+++.+
T Consensus 453 ~~L~~~~~lvg~~~G~~~~~~~~i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k------------- 518 (591)
T PTZ00207 453 AALPLPYFIAAFANGFMAATIALVTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADK------------- 518 (591)
T ss_pred cHhHHHHHHHHHHhhHhHHHHHHHHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhh-------------
Confidence 789999999999999999999999999999 999999999999999999999999999999999843
Q ss_pred CcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHh
Q 017795 308 PVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHRTKSVYAQLY 358 (366)
Q Consensus 308 ~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~~r~~~~~~~ 358 (366)
+++.+|+|++||+.+|.+++++|+++++++.++..|+|++|++..
T Consensus 519 ------~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~l~~R~r~~y~~~~ 563 (591)
T PTZ00207 519 ------LGQDVCTERVCVVMPLAFLLGLSFLAFITSTYVHLQYRRLCLKAL 563 (591)
T ss_pred ------CCCCeeCCceeeHhHHHHHHHHHHHHHHHHhheeeehHHHHHHHH
Confidence 345699999999999999999999999999999999999998653
No 2
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.65 E-value=3.3e-14 Score=142.27 Aligned_cols=194 Identities=15% Similarity=0.143 Sum_probs=135.7
Q ss_pred HhhhhHHHHHHHHHHHhhhhHHHHHhcHHHHHHH-hCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHH
Q 017795 132 ALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAM 208 (366)
Q Consensus 132 ~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~-~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~ 208 (366)
.++++.+|.+++..++.....+....++|.+.++ .|++..++ ..+++.++..+++++.|+++||+++++.. ...
T Consensus 249 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~---~~~ 325 (452)
T PRK11273 249 VLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRG---ATG 325 (452)
T ss_pred HHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcc---hHH
Confidence 5678889988888777776667778899999876 68886655 56677788889999999999999543221 111
Q ss_pred HHHHHHHHHHHHHHH---hcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHH
Q 017795 209 AVAQVVMAFALLYYA---IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIAS 285 (366)
Q Consensus 209 ~~~~~~~~~~~~l~~---~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G 285 (366)
.....+..++.+++. ..+....+++.+++|.+..+........+.|.+|++.+|++.|+.+....+|+.+.+|.++|
T Consensus 326 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g 405 (452)
T PRK11273 326 VFFMTLVTIATIVYWLNPAGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVG 405 (452)
T ss_pred HHHHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHH
Confidence 111222222222221 12223333444455554433333444567899999999999999999888887644799999
Q ss_pred HHhhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHhhc
Q 017795 286 GIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHRTKSVYAQLYGN 360 (366)
Q Consensus 286 ~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 360 (366)
++.|..+ |+.+|++++++++++++....+.+.+||.++++..|
T Consensus 406 ~l~~~~g--------------------------------~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (452)
T PRK11273 406 YTVDFFG--------------------------------WDGGFMVMIGGSILAVILLIVVMIGEKRHHEELLQK 448 (452)
T ss_pred HHHHHhc--------------------------------chHHHHHHHHHHHHHHHHHHHHhccccchHHHHHhh
Confidence 9999987 999999999999998888887776666666665444
No 3
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.64 E-value=2.8e-14 Score=143.41 Aligned_cols=188 Identities=14% Similarity=0.058 Sum_probs=130.5
Q ss_pred HhhhhHHHHHHHHHHHhhhhHHHHHhcHHHHHH-HhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHH
Q 017795 132 ALMKADFLLLFFSLVLASGSGLTVIDNLGQICQ-SLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAM 208 (366)
Q Consensus 132 ~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~-~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~ 208 (366)
.++++.+|.+.+..++.......+..|+|.+.+ ++|++..++ ..+.+.++..+|++++|+++||++||+..
T Consensus 254 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~------ 327 (467)
T PRK09556 254 VLKNPVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRAL------ 327 (467)
T ss_pred HHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchH------
Confidence 678999999998888887777778889998875 589987665 67778889999999999999999987543
Q ss_pred HHHHHHHHHH--HHHHHh-cchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhh-hHHHhhhhHH
Q 017795 209 AVAQVVMAFA--LLYYAI-GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPA-GSLIFSGVIA 284 (366)
Q Consensus 209 ~~~~~~~~~~--~~l~~~-~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~-G~~i~gp~i~ 284 (366)
.....+..++ .+.+.. .+...+++..++.|++..+........+.|.+|.+.+|++.|+.+..+.+ |+.+ +|.+.
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~-~~~~~ 406 (467)
T PRK09556 328 VACIALALIIFTLGVYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSF-AKVGL 406 (467)
T ss_pred HHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHH-HhhhH
Confidence 1111111112 122222 23334456666677554444444456777999999999999999999887 6575 99999
Q ss_pred HHHhhhhh-hhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHH
Q 017795 285 SGIYDYYA-EKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVV 347 (366)
Q Consensus 285 G~l~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~ 347 (366)
|++.|.+. .+. ..-+...+|+..|++++++++++++..+.+.
T Consensus 407 G~i~~~~~~g~~---------------------~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 449 (467)
T PRK09556 407 GMIADPTKNGTP---------------------IFGYTLTGWAGTFAALDIAAIGCICLMAIVA 449 (467)
T ss_pred HHHhcccccccc---------------------cccccccChHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999211 000 0000011399999999888888877776654
No 4
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.61 E-value=1.3e-13 Score=137.39 Aligned_cols=185 Identities=18% Similarity=0.152 Sum_probs=125.8
Q ss_pred HhhhhHHHHHHHHHHHhhhhHHHHHhcHHHHH-HHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHH
Q 017795 132 ALMKADFLLLFFSLVLASGSGLTVIDNLGQIC-QSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAM 208 (366)
Q Consensus 132 ~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~-~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~ 208 (366)
.++++.+|.+.+.+++.......+..++|.+. +++|++.... ..+++.++..+|++++|+++||+.++.........
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~ 318 (434)
T PRK11663 239 VLLNPYIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIF 318 (434)
T ss_pred HhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHH
Confidence 56778899888777766666666778899988 4579887665 77888899999999999999999543211111111
Q ss_pred HHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHh
Q 017795 209 AVAQVVMAFALLYYAIGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIY 288 (366)
Q Consensus 209 ~~~~~~~~~~~~l~~~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~ 288 (366)
.++.++..++.+++...+.....+..+..|++..+........++|.++++++|++.|+.+....+|+.+ +|.+.|++.
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~-~p~~~g~l~ 397 (434)
T PRK11663 319 AAGILLSVGSLWLMPFASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAAL-SGYPLAKVL 397 (434)
T ss_pred HHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHH-hcccHHHHH
Confidence 2222222222222222222222233333444333333444567789999999999999999999999996 999999999
Q ss_pred hhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHHhh
Q 017795 289 DYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHR 349 (366)
Q Consensus 289 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~ 349 (366)
|..+ |+.+|++.+++++++++..+...++
T Consensus 398 ~~~g--------------------------------~~~~f~~~~~~~~~~~~~~~~~~~~ 426 (434)
T PRK11663 398 EIWH--------------------------------WTGFFVVISIAAGISALLLLPFLNA 426 (434)
T ss_pred Hhcc--------------------------------cHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9877 9999999998887776655544433
No 5
>PRK10504 putative transporter; Provisional
Probab=99.61 E-value=3.5e-14 Score=142.46 Aligned_cols=175 Identities=17% Similarity=0.236 Sum_probs=143.7
Q ss_pred hHHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHH
Q 017795 136 ADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQV 213 (366)
Q Consensus 136 ~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~ 213 (366)
+.+|++++++++.......+..++|.+.+++|.+.... ..+.+.++..++.+++|+++||+|||+.. ..+.+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~------~~~~~ 83 (471)
T PRK10504 10 WQLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIF------FTAIV 83 (471)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHH------HHHHH
Confidence 35788888888887777778889999999999988765 66777888889999999999999998654 44555
Q ss_pred HHHHHHHHHH-hcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhh
Q 017795 214 VMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYA 292 (366)
Q Consensus 214 ~~~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~ 292 (366)
+.+++.+++. ..+...+++..++.|++.+...+...+++.|.++.++++.++++......+|..+ ||.++|.+.+..+
T Consensus 84 ~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-g~~~~g~l~~~~g 162 (471)
T PRK10504 84 LFTLGSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLL-GPALGGLLVEYAS 162 (471)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHhhcc
Confidence 5555555444 3455677888999999999988899999999999999999999999999999996 9999999998776
Q ss_pred hhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHHhh
Q 017795 293 EKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHR 349 (366)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~ 349 (366)
|++.|++...++.++.++.....++
T Consensus 163 --------------------------------w~~~f~~~~~~~~l~~~~~~~~~~~ 187 (471)
T PRK10504 163 --------------------------------WHWIFLINIPVGIIGAIATLMLMPN 187 (471)
T ss_pred --------------------------------HHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9999999888887777666555443
No 6
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.61 E-value=3.1e-14 Score=138.08 Aligned_cols=173 Identities=14% Similarity=0.178 Sum_probs=155.8
Q ss_pred HHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHH
Q 017795 137 DFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVV 214 (366)
Q Consensus 137 ~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~ 214 (366)
..+.+.++.|+.....+.....+|++.+++|.+...+ .++.+.++..++.++...++||+.||+.+ ...+.+
T Consensus 14 ~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lL------l~~l~l 87 (394)
T COG2814 14 ALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLL------LGLLAL 87 (394)
T ss_pred HHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHH------HHHHHH
Confidence 4566777777877888888999999999999998777 99999999999999999999999887765 777788
Q ss_pred HHHHHHHHH-hcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhhh
Q 017795 215 MAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAE 293 (366)
Q Consensus 215 ~~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~~ 293 (366)
+.++.++.+ ..+...+.+++++.|++.|..|++..++++++.|+++++.+.++++++..++..+ |.+++.++-|..|
T Consensus 88 Fi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~-GvPLGt~ig~~~G- 165 (394)
T COG2814 88 FIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVL-GVPLGTFLGQLFG- 165 (394)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHH-hccHHHHHHHHhh-
Confidence 888888877 5677889999999999999999999999999999999999999999999999996 9999999999998
Q ss_pred hhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHHh
Q 017795 294 KQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVH 348 (366)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~ 348 (366)
||.+|++.+++++++.+..+...+
T Consensus 166 -------------------------------WR~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 166 -------------------------------WRATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred -------------------------------HHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999988877777666
No 7
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.60 E-value=3.6e-14 Score=136.41 Aligned_cols=174 Identities=26% Similarity=0.314 Sum_probs=135.6
Q ss_pred CHHHHhhhhHHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchh
Q 017795 128 TLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRP 205 (366)
Q Consensus 128 ~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~ 205 (366)
+.++.++++.+|.+.+.+++..........+.+++.+++|++.... ..++..+...++++..|+++||++||+..
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~--- 273 (377)
T TIGR00890 197 TVWEMLRTPQFWVLYLSFFLNAVSGLLLIGLYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTM--- 273 (377)
T ss_pred hHHHHHcCccHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh---
Confidence 4567888889998877777666555555666777888888877554 77888899999999999999999987655
Q ss_pred HHHHHHHHHHHHHHHHHHhcc-h--hHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhh
Q 017795 206 VAMAVAQVVMAFALLYYAIGW-P--GEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGV 282 (366)
Q Consensus 206 ~~~~~~~~~~~~~~~l~~~~~-~--~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~ 282 (366)
..+.++++++.+++...+ . ..++...++.|++.|..++..+.+++|.+|.+++++.+|+.+....+|..+ +|.
T Consensus 274 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~-~~~ 349 (377)
T TIGR00890 274 ---SIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIF-GGL 349 (377)
T ss_pred ---hHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHH-HHH
Confidence 455555555555444222 1 223345567788888888888889999999999999999999999999996 999
Q ss_pred HHHHHhhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHH
Q 017795 283 IASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAM 340 (366)
Q Consensus 283 i~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~ 340 (366)
++|.+.|..+ |++.|++.+++++++.
T Consensus 350 ~~g~l~~~~g--------------------------------~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 350 IASHALTEIG--------------------------------FEYTFIVTGAFALTSL 375 (377)
T ss_pred HHHHHHhhhc--------------------------------hhhHHHHHHHHHHHhc
Confidence 9999999877 9999988887766654
No 8
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.60 E-value=1.5e-13 Score=137.90 Aligned_cols=191 Identities=16% Similarity=0.147 Sum_probs=139.6
Q ss_pred HHhhhhHHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHH
Q 017795 131 QALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAM 208 (366)
Q Consensus 131 ~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~ 208 (366)
+.++++.+|...+..++..........++|.+.+++|++...+ ..++..++..++++++|+++||...+. .|...+
T Consensus 236 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~--~~~~~~ 313 (455)
T TIGR00892 236 SLFTHRGFLVYLSGNVIMFLGFFAPIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRP--HVQYLF 313 (455)
T ss_pred HHhcCchHHHHHHHHHHHHHHccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCH--HHHHHH
Confidence 5678888888777766666665666678888888999987665 778888999999999999999742211 111222
Q ss_pred HHHHHHHHHHHHHHH-hcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHH
Q 017795 209 AVAQVVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGI 287 (366)
Q Consensus 209 ~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l 287 (366)
..+.++.+++.++.. ..+...+++..++.|++.+...+...+++.|.++++++++.+|+.+....+|..+ ||.++|++
T Consensus 314 ~~~~~~~~l~~ll~~~~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~i-gp~i~G~l 392 (455)
T TIGR00892 314 SFALLFNGLTHLLCALAGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLI-GPPLAGRL 392 (455)
T ss_pred HHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHc-cccceeee
Confidence 333333333333333 3445566777888999999888889999999999999999999999999999996 99999999
Q ss_pred hhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHH----HHHhhcHHHHH
Q 017795 288 YDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSL----IVVHRTKSVYA 355 (366)
Q Consensus 288 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~----~~~~~~r~~~~ 355 (366)
.|..+ +|++.|++.+++.+++++... +.++++||..|
T Consensus 393 ~~~~g-------------------------------~~~~~f~~~~~~~li~~~~~~~~~~~~~~~~~~~~~ 433 (455)
T TIGR00892 393 VDATK-------------------------------NYKYIFYASGSIVVSAGLFLAIGNYINYRLLAKEQK 433 (455)
T ss_pred ehhcC-------------------------------CcchHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99875 388999888877766655332 23344555444
No 9
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.59 E-value=3.9e-14 Score=143.39 Aligned_cols=182 Identities=22% Similarity=0.289 Sum_probs=156.9
Q ss_pred HHHhhhhHHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHH
Q 017795 130 PQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVA 207 (366)
Q Consensus 130 ~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~ 207 (366)
.+.++++.|+++.+...+...........+|.+.++.|++...+ .+++.++.+.+||++.|+++|+... ++.+.
T Consensus 292 ~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~----~~~~~ 367 (509)
T KOG2504|consen 292 LSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGI----RALVL 367 (509)
T ss_pred HHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCcccc----chHHH
Confidence 47889999999999988888888888889999999999988776 8999999999999999999999863 23345
Q ss_pred HHHHHHHHHHHHHHHH-hcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHH
Q 017795 208 MAVAQVVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASG 286 (366)
Q Consensus 208 ~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~ 286 (366)
..++.++.+++.+.+. ..+...+....+++|++.|...++.+.++.|+.+.+++..++|+..+...++.++ ||+++|+
T Consensus 368 ~~~~ll~~gl~~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~-gpPiag~ 446 (509)
T KOG2504|consen 368 FLLTLLIAGLARLFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALV-GPPIAGL 446 (509)
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHc-Cccccee
Confidence 5667777777765655 3445678889999999999999998899999999999999999999999999997 9999999
Q ss_pred HhhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHH
Q 017795 287 IYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVV 347 (366)
Q Consensus 287 l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~ 347 (366)
++|.++ +|...|+..+++.+++.++.++..
T Consensus 447 ~~d~tg-------------------------------~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 447 LYDITG-------------------------------NYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred eeeccC-------------------------------CeeeehhhcChHHHHHHHHHHHhH
Confidence 999998 599999999988888877776655
No 10
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.58 E-value=8.4e-14 Score=138.65 Aligned_cols=174 Identities=10% Similarity=0.152 Sum_probs=138.1
Q ss_pred hHHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHH
Q 017795 136 ADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQV 213 (366)
Q Consensus 136 ~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~ 213 (366)
..++..++.+++.......+...+|++.+++|++..+. ..+.+.++..++++++|+++||+|||+.+ .++.+
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~------~~~~~ 96 (434)
T PRK11663 23 HILITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFM------GIGLI 96 (434)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhH------HHHHH
Confidence 34455556666666555567778999999999988765 78888899999999999999999998755 66666
Q ss_pred HHHHHHHHHH-hcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhh
Q 017795 214 VMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYA 292 (366)
Q Consensus 214 ~~~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~ 292 (366)
+.+++.++.. ..+...+++..++.|++.|..++....++.+.++.++++.+.++.+.+..+|+.+ +|.+.|++.+..+
T Consensus 97 ~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~-~~~~~~~l~~~~g 175 (434)
T PRK11663 97 ATGIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGAL-IPLVVGAIALHYG 175 (434)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHccc
Confidence 6666666655 3445566677788899888888888899999999999999999999999999996 9999999998776
Q ss_pred hhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHHh
Q 017795 293 EKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVH 348 (366)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~ 348 (366)
|++.|++.++++++.++...+..+
T Consensus 176 --------------------------------w~~~f~~~~i~~~~~~~~~~~~~~ 199 (434)
T PRK11663 176 --------------------------------WRYGMMIAGIIAIVVGLFLCWRLR 199 (434)
T ss_pred --------------------------------HHHHHHHHHHHHHHHHHHHHHHcC
Confidence 999999988776655544444333
No 11
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.58 E-value=4.4e-13 Score=129.11 Aligned_cols=187 Identities=14% Similarity=0.090 Sum_probs=131.1
Q ss_pred CCHHHHhhhhHHHHHHHHHHHhhhhHHHHHhcHHHHHHH-hCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCc
Q 017795 127 FTLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYP 203 (366)
Q Consensus 127 ~~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~-~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~ 203 (366)
.+.++.++++++|.+.+..++.......+..++|.+.++ +|++.... ..+...+++.++++++|+++||++||+...
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 285 (399)
T TIGR00893 206 YQIKELLKDRRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSL 285 (399)
T ss_pred cchHHHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccch
Confidence 356778889999988888888877777888889988754 78876654 677788889999999999999999985220
Q ss_pred --hhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhh
Q 017795 204 --RPVAMAVAQVVMAFALLYYAIGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSG 281 (366)
Q Consensus 204 --R~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp 281 (366)
.........++.++........+.....+...+.+.+..+..+...++++|.+|++++|+++++.+....+|+.+ +|
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~-~~ 364 (399)
T TIGR00893 286 VFARKTAIIAGLVLSLLMFATNYVNIPYAALALVALGFFGLGAGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIV-GP 364 (399)
T ss_pred hHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHhchhhhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhh-hh
Confidence 000111111111111111111112222333333333333367888889999999999999999999999999996 99
Q ss_pred hHHHHHhhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHH
Q 017795 282 VIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLI 345 (366)
Q Consensus 282 ~i~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~ 345 (366)
.+.|++.|..+ +|+..|++.+++++++.++.++
T Consensus 365 ~i~g~l~~~~g-------------------------------~~~~~~~~~~~~~~~~~~~~~~ 397 (399)
T TIGR00893 365 IVIGAIAATTG-------------------------------SFAGALMVVAALALIGALSYLL 397 (399)
T ss_pred HHhhhhccCCC-------------------------------chhHHHHHHHHHHHHHHHHHHH
Confidence 99999999776 3888998888887777665543
No 12
>PRK03545 putative arabinose transporter; Provisional
Probab=99.58 E-value=7.9e-14 Score=136.54 Aligned_cols=172 Identities=10% Similarity=0.121 Sum_probs=135.0
Q ss_pred HHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHH
Q 017795 138 FLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVM 215 (366)
Q Consensus 138 ~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~ 215 (366)
+|.+.++.++...........+|++.+++|.+..+. ..+.+.++..++.+.+|+++||+|||+.+ ..+.++.
T Consensus 11 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~------~~~~~~~ 84 (390)
T PRK03545 11 VVTLALAAFIFNTTEFVPVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLL------IGLFVLF 84 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHH------HHHHHHH
Confidence 444444433332233334456899999999988776 77788888889999999999999998755 6666777
Q ss_pred HHHHHHHH-hcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhhhh
Q 017795 216 AFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEK 294 (366)
Q Consensus 216 ~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~~~ 294 (366)
+++.++.. ..+...+++++++.|++.+..++...++++|.+++++|+.+.|+...+..+|..+ ||.+++.+.+..+
T Consensus 85 ~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~i-g~~l~~~l~~~~g-- 161 (390)
T PRK03545 85 IASHVLSALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVL-GLPLGRVIGQYLG-- 161 (390)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHH-HhhHHHHHHHHhc--
Confidence 77766655 4566778888899999988888888899999999999999999999999999996 9999999988776
Q ss_pred hhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHHh
Q 017795 295 QAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVH 348 (366)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~ 348 (366)
|++.|++.++++++..+......+
T Consensus 162 ------------------------------w~~~f~~~~~~~~l~~~~~~~~~~ 185 (390)
T PRK03545 162 ------------------------------WRTTFLAIGGGALITLLLLIKLLP 185 (390)
T ss_pred ------------------------------HHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999887776655544433
No 13
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.58 E-value=7.5e-14 Score=138.18 Aligned_cols=180 Identities=12% Similarity=0.055 Sum_probs=140.1
Q ss_pred HHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHH
Q 017795 137 DFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVV 214 (366)
Q Consensus 137 ~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~ 214 (366)
.++++++++++............|.+.+++|.+..+. ..+.+.++..++.+..|+++||+|||+.+ ..+.++
T Consensus 9 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~------~~~~~~ 82 (412)
T TIGR02332 9 LIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWI------AGIMVL 82 (412)
T ss_pred HHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHH------HHHHHH
Confidence 3455566666666666666677788889999998776 78888999999999999999999998755 666666
Q ss_pred HHHHHHHHH-hcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhhh
Q 017795 215 MAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAE 293 (366)
Q Consensus 215 ~~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~~ 293 (366)
..++.++.+ ..+...+++.+++.|++.++.++....+++|.+++++|+.+.++.+...++|..+ +|.+++++.+..+
T Consensus 83 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~-~~~~~~~l~~~~~- 160 (412)
T TIGR02332 83 WGIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMAL-GLILSGYILALDG- 160 (412)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCC-
Confidence 666666655 4566778899999999999988888888999999999999999999999999996 9999998875311
Q ss_pred hhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHHhh
Q 017795 294 KQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHR 349 (366)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~ 349 (366)
..+..+||++|++.++.+++.+++..++.++
T Consensus 161 -------------------------~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~ 191 (412)
T TIGR02332 161 -------------------------LMALKGWQWLFLLEGFPSVILGVMTWFWLDD 191 (412)
T ss_pred -------------------------CCCccchhHHHHHHHHHHHHHHHHHhhccCC
Confidence 0000139999999888777665555555444
No 14
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.57 E-value=1.2e-13 Score=133.18 Aligned_cols=190 Identities=14% Similarity=0.126 Sum_probs=147.1
Q ss_pred HHhhhhHHHHHHHHHHHhhhhHHHHHhcHHHHHHH-hCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHH
Q 017795 131 QALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVA 207 (366)
Q Consensus 131 ~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~-~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~ 207 (366)
..++|+..|++.++.+..+..-+++.+|.|.++.+ .|++...+ ..+++-.++..|.+++|++|||+-+.+.. ..
T Consensus 247 YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~---p~ 323 (448)
T COG2271 247 YVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRG---PM 323 (448)
T ss_pred HHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccc---hH
Confidence 36789999999999999999999999999998865 68887766 89999999999999999999998432211 22
Q ss_pred HHHHHHHHHHHHHHHH-hc--chhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhh-hHHHhhhhH
Q 017795 208 MAVAQVVMAFALLYYA-IG--WPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPA-GSLIFSGVI 283 (366)
Q Consensus 208 ~~~~~~~~~~~~~l~~-~~--~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~-G~~i~gp~i 283 (366)
..+.++...++...+. .. +.....++.+++|+...+..-+....+.|..|.+..|++.|+....+.+ |+. ++...
T Consensus 324 ~~i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~-~a~~~ 402 (448)
T COG2271 324 ALIFMLLITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAA-LAGLP 402 (448)
T ss_pred HHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHH-hcCCc
Confidence 2333333333333333 22 2345566777889887777777777888999999999999999999999 666 58899
Q ss_pred HHHHhhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHH
Q 017795 284 ASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHRTKSVYAQ 356 (366)
Q Consensus 284 ~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~~r~~~~~ 356 (366)
.|++.|.+| |...|.++.+.++++.++.+.+..+.++.+++
T Consensus 403 ~g~i~d~~g--------------------------------W~g~Fi~~~~~a~l~~lll~~~~~~~~~~~~~ 443 (448)
T COG2271 403 LGYIADTWG--------------------------------WDGGFIVLSIAALLAILLLLPVWNAEERKIRD 443 (448)
T ss_pred ceeeEecCC--------------------------------CcchHHHHHHHHHHHHHHHHHHHhhcchhhhh
Confidence 999999877 99999999988888888877776665554443
No 15
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.57 E-value=1.1e-13 Score=140.25 Aligned_cols=173 Identities=11% Similarity=0.091 Sum_probs=141.9
Q ss_pred HHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHH
Q 017795 138 FLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVM 215 (366)
Q Consensus 138 ~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~ 215 (366)
+..+.+++++.......+...+|++.+++|.+..+. ..+.+.++..++.+.+|+++||+|||+.+ ..+.++.
T Consensus 8 ~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l------~~~~~~~ 81 (495)
T PRK14995 8 LVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLL------MLGGTLF 81 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH------HHHHHHH
Confidence 445566777777777778888999999999876554 78888888899999999999999998766 6777777
Q ss_pred HHHHHHHH-hcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhh-CCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhhh
Q 017795 216 AFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELF-GLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAE 293 (366)
Q Consensus 216 ~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f-~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~~ 293 (366)
+++.++++ ..+...+++++++.|+|.+...+.....+.+.+ ++++|+.+.|+......+|..+ ||.++|++.+..+
T Consensus 82 ~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~-gp~lgg~l~~~~g- 159 (495)
T PRK14995 82 GLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAF-GPLVGGILLEHFY- 159 (495)
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhhccCC-
Confidence 77777666 456778888999999999887777777777776 5688999999999999999996 9999999998877
Q ss_pred hhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHHhh
Q 017795 294 KQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHR 349 (366)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~ 349 (366)
||+.|++...++++..++..+..++
T Consensus 160 -------------------------------wr~~f~i~~~~~~~~~~l~~~~l~~ 184 (495)
T PRK14995 160 -------------------------------WGSVFLINVPIVLVVMGLTARYVPR 184 (495)
T ss_pred -------------------------------hHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9999999988887776666555443
No 16
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.56 E-value=1.5e-13 Score=135.15 Aligned_cols=156 Identities=12% Similarity=0.154 Sum_probs=129.0
Q ss_pred hhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH-h
Q 017795 148 ASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-I 224 (366)
Q Consensus 148 ~~~~~~~~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~-~ 224 (366)
.....+.....+|++.+++|++..+. .++...++..+++++.|.++||+|||+.+ ..+.++.+++.++.. .
T Consensus 32 ~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~------~~~~~~~~~~~~~~~~~ 105 (394)
T PRK10213 32 LIIVEFLPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVV------ILFAVLLTLSCLLVSFA 105 (394)
T ss_pred HHHHHHHHHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHH------HHHHHHHHHHHHHHHHH
Confidence 33344455567889999999988765 77888899999999999999999998765 666666666666655 4
Q ss_pred cchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhhhhhhhhhhhccC
Q 017795 225 GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNG 304 (366)
Q Consensus 225 ~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~~~~~~~~~~~~~ 304 (366)
.+...+++++++.|++.+..++...++++|.++.++++.+.++...+.++|..+ +|.+++++.+..+
T Consensus 106 ~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~i-g~~l~~~l~~~~g------------ 172 (394)
T PRK10213 106 NSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVI-AAPLGSFLGELIG------------ 172 (394)
T ss_pred ChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhcC------------
Confidence 556788899999999999989999999999999999999999999999999996 9999999998776
Q ss_pred CCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHH
Q 017795 305 NMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVM 342 (366)
Q Consensus 305 ~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~ 342 (366)
|++.|++.+++++++.+.
T Consensus 173 --------------------w~~~f~~~~~l~~~~~l~ 190 (394)
T PRK10213 173 --------------------WRNVFNAAAVMGVLCIFW 190 (394)
T ss_pred --------------------HHHHHHHHHHHHHHHHHH
Confidence 999999888766554433
No 17
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.56 E-value=1.5e-13 Score=134.33 Aligned_cols=173 Identities=11% Similarity=0.087 Sum_probs=141.4
Q ss_pred hHHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHH
Q 017795 136 ADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQV 213 (366)
Q Consensus 136 ~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~ 213 (366)
+.+|.+.+..++.......+...+|.+.+++|++.... ..+...++..++++.+|+++||+|||+.+ .++.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~------~~~~~ 76 (382)
T PRK10091 3 KVILSLALGTFGLGMAEFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHIL------LFLVA 76 (382)
T ss_pred chHHHHHHHHHHHHhhHHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHH------HHHHH
Confidence 34666666666666666677788999999999987765 88899999999999999999999998765 66666
Q ss_pred HHHHHHHHHH-hcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhh
Q 017795 214 VMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYA 292 (366)
Q Consensus 214 ~~~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~ 292 (366)
+.+++.++.. ..+...+++.+++.|++.+...+....++.+++++++++.+.++...+..+|..+ ||.+++++.+..+
T Consensus 77 ~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-g~~l~~~l~~~~g 155 (382)
T PRK10091 77 LCVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLL-GIPLGTYLSQEFS 155 (382)
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHH-hccHHHHHhhhcc
Confidence 6677766665 4566778889999999999888888888999999999999999999999999996 9999999988766
Q ss_pred hhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHH
Q 017795 293 EKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVV 347 (366)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~ 347 (366)
||++|++.++++++..+......
T Consensus 156 --------------------------------wr~~f~~~~~~~~~~~~~~~~~l 178 (382)
T PRK10091 156 --------------------------------WRYTFLLIAVFNIAVLASIYFWV 178 (382)
T ss_pred --------------------------------HHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999998887776655444333
No 18
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.55 E-value=2.2e-13 Score=133.85 Aligned_cols=185 Identities=11% Similarity=0.051 Sum_probs=137.8
Q ss_pred HHHHhhhhHHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhH
Q 017795 129 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPV 206 (366)
Q Consensus 129 ~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~ 206 (366)
..+.++++++|.+.+.+++..........++|.+.+++|++...+ ..+++.++..+|+++.|+++||++||+..
T Consensus 198 ~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~---- 273 (393)
T PRK09705 198 PVRVVFTPRAWTLGVYFGLINGGYASLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLL---- 273 (393)
T ss_pred CcccccCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHH----
Confidence 345667888888877776666666678889999999899887655 78889999999999999999999886543
Q ss_pred HHHHHHHHHHHHHHHHH-hcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhC-CCchhhHHHHHHhHhhhhHHHhhhhHH
Q 017795 207 AMAVAQVVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFG-LKSFGALYNFLTLASPAGSLIFSGVIA 284 (366)
Q Consensus 207 ~~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~-~~~~g~~~g~~~~~~~~G~~i~gp~i~ 284 (366)
.++..+.+++.+++. ...... .+..++.|++.+..++.......+.++ .+++|+.+|+.+....+++.+ +|.+.
T Consensus 274 --~~~~~l~~~~~~~~~~~~~~~~-~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~-gp~~~ 349 (393)
T PRK09705 274 --MLALVLQLVGFCGFIWLPLQLP-VLWAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGL-APWFS 349 (393)
T ss_pred --HHHHHHHHHHHHHHHHccchHH-HHHHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHH-HHHHH
Confidence 344444444444332 222111 123345677777777777767777775 467899999999999999996 99999
Q ss_pred HHHhhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHHhhcHH
Q 017795 285 SGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHRTKS 352 (366)
Q Consensus 285 G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~~r~ 352 (366)
|++.|..| +|+..|++.+++++++.++.+++.++++.
T Consensus 350 G~l~~~~g-------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (393)
T PRK09705 350 GVLRSISG-------------------------------NYLMDWAFHALCVVGLMIITLRFAPARFP 386 (393)
T ss_pred HHHHHHhC-------------------------------CchHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 99999887 48999999888888777776666655544
No 19
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.54 E-value=2.7e-13 Score=134.24 Aligned_cols=162 Identities=13% Similarity=0.080 Sum_probs=129.8
Q ss_pred hhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH-hc
Q 017795 149 SGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IG 225 (366)
Q Consensus 149 ~~~~~~~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~-~~ 225 (366)
......+...+|++.+++|.+.... .++++.++..++.+.+|+++||+|||+.+ ..+.++.+++.++.. ..
T Consensus 29 ~~~~~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l------~~~~~~~~~~~~~~~~a~ 102 (413)
T PRK15403 29 YLTTDLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVL------ITGALIFTLACAATLFTT 102 (413)
T ss_pred HHHHHhhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHH------HHHHHHHHHHHHHHHHcC
Confidence 3344456677889999999887665 88899999999999999999999998755 555666666666555 44
Q ss_pred chhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhhhhhhhhhhhccCC
Q 017795 226 WPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGN 305 (366)
Q Consensus 226 ~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~~~~~~~~~~~~~~ 305 (366)
+...+++++++.|++.+...+..++++.|.++.++++.++++.+....+|..+ ||.+++.+.+..+
T Consensus 103 ~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~lg~~l~~~~g------------- 168 (413)
T PRK15403 103 SMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPII-GPLSGAALMHFVH------------- 168 (413)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhcC-------------
Confidence 56678889999999887666667788999999999999999999999999996 9999999887665
Q ss_pred CCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHHhh
Q 017795 306 MLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHR 349 (366)
Q Consensus 306 ~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~ 349 (366)
|++.|++.+++.+++.+..++..++
T Consensus 169 -------------------w~~~f~~~~~~~~i~~~~~~~~lp~ 193 (413)
T PRK15403 169 -------------------WKVLFAIIAVMGLIAFVGLLLAMPE 193 (413)
T ss_pred -------------------HHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9999999998877766654444443
No 20
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.54 E-value=1.7e-13 Score=131.20 Aligned_cols=168 Identities=10% Similarity=-0.016 Sum_probs=131.9
Q ss_pred HHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHH
Q 017795 139 LLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMA 216 (366)
Q Consensus 139 ~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~ 216 (366)
|.++++.++...........+|.+..+++.+.... ..++..++..++.+++|+++||+|||+.+ ..+.++.+
T Consensus 2 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~------~~~~~~~~ 75 (365)
T TIGR00900 2 RLLFAAQLISLIGTAITQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVM------IGADLIRA 75 (365)
T ss_pred eehHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHH------HHHHHHHH
Confidence 44555556665555566677888888988887665 77888889999999999999999998655 44444444
Q ss_pred HHHHHHH-hc-----chhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhh
Q 017795 217 FALLYYA-IG-----WPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDY 290 (366)
Q Consensus 217 ~~~~l~~-~~-----~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~ 290 (366)
++.++.. .. +...+++..++.|++.+...+...++++|.+++++++..+++.+....+|..+ ||.+++.+.+.
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-g~~l~~~l~~~ 154 (365)
T TIGR00900 76 VLVAVLPFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIV-GPGIGGLMYAT 154 (365)
T ss_pred HHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 4433332 22 55677888899999999988999999999999999999999999999999996 99999999987
Q ss_pred hhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHH
Q 017795 291 YAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLI 345 (366)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~ 345 (366)
.+ |++.|++.++.++++.+....
T Consensus 155 ~g--------------------------------~~~~~~~~~~~~~~~~~~~~~ 177 (365)
T TIGR00900 155 LG--------------------------------IKWAIWVDAVGFAISALLIVS 177 (365)
T ss_pred hh--------------------------------HHHHHHHHHHHHHHHHHHHHh
Confidence 77 999998887766665544443
No 21
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.54 E-value=2.6e-13 Score=142.75 Aligned_cols=162 Identities=16% Similarity=0.146 Sum_probs=122.8
Q ss_pred HHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH-hcchhHH
Q 017795 154 TVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IGWPGEI 230 (366)
Q Consensus 154 ~~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~-~~~~~~l 230 (366)
.+...+|.+.+++|.+.... +.+++.++.++|.+++|+++||+|||+.+ .++.++.+++.++.+ ..+...+
T Consensus 185 ~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~l------ii~lil~~i~~ll~afa~s~~~l 258 (742)
T TIGR01299 185 VVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCL------LICLSVNGFFAFFSSFVQGYGFF 258 (742)
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH------HHHHHHHHHHHHHHHHHhhHHHH
Confidence 35556888888999987665 78888999999999999999999998665 445555555555544 3456678
Q ss_pred HHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhhhhhhhhhhhccCCCCCcc
Q 017795 231 YVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVS 310 (366)
Q Consensus 231 ~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~~~~~~~~~~~~~~~~~~~ 310 (366)
++++++.|++.|+..+..+++++|.+|.+.||..++++.+...+|.++ ++.+++.+....+...
T Consensus 259 lv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~il-a~~la~~il~~~G~~~--------------- 322 (742)
T TIGR01299 259 LFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIY-AAAMAWAIIPHYGWSF--------------- 322 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhccchh---------------
Confidence 889999999999999999999999999999999999999999999996 8888877765544110
Q ss_pred cCCCCCCcccCCcchHHHHHHHHHHHHHHHH
Q 017795 311 FRDQETPTCLGSICYSITCGIMAGLCIIAMV 341 (366)
Q Consensus 311 ~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~ 341 (366)
.. ...+...+||+.|++.++.++++.+
T Consensus 323 -~~---g~~~~~~gWR~l~~i~~lp~ll~ll 349 (742)
T TIGR01299 323 -QM---GSAYQFHSWRVFVIVCAFPCVFAIG 349 (742)
T ss_pred -cc---ccccccccHHHHHHHHHHHHHHHHH
Confidence 00 0112233599998887766555443
No 22
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.54 E-value=3.1e-13 Score=131.00 Aligned_cols=162 Identities=10% Similarity=0.115 Sum_probs=131.8
Q ss_pred hhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH-hc
Q 017795 149 SGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IG 225 (366)
Q Consensus 149 ~~~~~~~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~-~~ 225 (366)
......+...+|.+.+++|.+..+. ..+.+.++..++.+++|+++||+|||+.. ..+.++.+++.++.. ..
T Consensus 18 ~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~------~~~~~~~~~~~~~~~~~~ 91 (385)
T TIGR00710 18 PLGIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVL------LLGLFIFALSSLGLALSN 91 (385)
T ss_pred HHHHHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHH------HHHHHHHHHHHHHHHHHc
Confidence 3344456667899999999988766 78888899999999999999999987654 556666666666554 44
Q ss_pred chhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhhhhhhhhhhhccCC
Q 017795 226 WPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGN 305 (366)
Q Consensus 226 ~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~~~~~~~~~~~~~~ 305 (366)
+...+++..++.|++.+...+...+++.|.+++++++..+++.+....+|..+ +|.++|.+.+..+
T Consensus 92 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-g~~~~~~l~~~~~------------- 157 (385)
T TIGR00710 92 NIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAV-APLLGGYILVWLS------------- 157 (385)
T ss_pred cHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHcC-------------
Confidence 55677788899999999888999999999999999999999999999999996 9999999988776
Q ss_pred CCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHHhh
Q 017795 306 MLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHR 349 (366)
Q Consensus 306 ~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~ 349 (366)
|++.|++.++++++..+...+..++
T Consensus 158 -------------------~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (385)
T TIGR00710 158 -------------------WHAIFAFLSLAGILLSALIFFILPE 182 (385)
T ss_pred -------------------HHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9999999888777766665554433
No 23
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.54 E-value=3.3e-13 Score=132.51 Aligned_cols=172 Identities=14% Similarity=0.087 Sum_probs=126.8
Q ss_pred HHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHH
Q 017795 138 FLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVM 215 (366)
Q Consensus 138 ~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~ 215 (366)
.+.++..+++.......+..++|.+.++.|++.... ..+...++..+++++.|+++||++||+.. ....+..
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~------~~~~~~~ 295 (406)
T PRK11551 222 TLLLWISYFFTLIVLYFLLNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVV------LLIYAGI 295 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH------HHHHHHH
Confidence 344444444444455566778999999999887654 67778889999999999999999987544 3333444
Q ss_pred HHHHHHHH-hcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhhhh
Q 017795 216 AFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEK 294 (366)
Q Consensus 216 ~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~~~ 294 (366)
+++.+++. ..+...+++..++.|++.++..+..+++++|.+|++++|+..|+.+....+|+.+ ||.++|+++|..+
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~-g~~~~g~l~~~~~-- 372 (406)
T PRK11551 296 LASLAALAAAPSFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMA-GPLLAGQLLALGR-- 372 (406)
T ss_pred HHHHHHHHhcCcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHH-HhhhHhhhhccCC--
Confidence 44444333 3344455666677888877778888899999999999999999999999999996 9999999998755
Q ss_pred hhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHH
Q 017795 295 QAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVV 347 (366)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~ 347 (366)
.|...+++.+.+.+++.++.+.+.
T Consensus 373 -----------------------------~~~~~~~~~~~~~~~~~~~~~~~~ 396 (406)
T PRK11551 373 -----------------------------STVGVIGASIPVILVAALAALLLV 396 (406)
T ss_pred -----------------------------chHHHHHHHHHHHHHHHHHHHHHh
Confidence 277777777766666665555443
No 24
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.53 E-value=1.4e-13 Score=138.09 Aligned_cols=171 Identities=12% Similarity=0.168 Sum_probs=139.8
Q ss_pred HHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHH
Q 017795 140 LLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAF 217 (366)
Q Consensus 140 ll~~~~~~~~~~~~~~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~ 217 (366)
.+.++.++...........+|.+.+++|.+..+. ..+.+.++..++.++.|+++||+|||+.+ ..+.++.++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~------~~~~~~~~~ 79 (485)
T TIGR00711 6 VLMLGTFMAVLDSTIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLF------LISTFAFTL 79 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHH------HHHHHHHHH
Confidence 3444555555555667778999999999987655 78888999999999999999999998655 666666677
Q ss_pred HHHHHH-hcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhhhhhh
Q 017795 218 ALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQA 296 (366)
Q Consensus 218 ~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~~~~~ 296 (366)
+.++.. ..+...+++++++.|++.+...+...+++.|.+++++++.+.++......+|..+ ||.++|++.+..+
T Consensus 80 ~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~-g~~~~~~l~~~~~---- 154 (485)
T TIGR00711 80 GSLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPAL-GPTLGGWIIENYH---- 154 (485)
T ss_pred HHHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhh-hhccHhHhccCcC----
Confidence 766665 4556678889999999999988999999999999999999999999999999996 9999999998776
Q ss_pred hhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHHhh
Q 017795 297 GLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHR 349 (366)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~ 349 (366)
|++.|++.+.+++++.++..++.++
T Consensus 155 ----------------------------w~~~f~~~~~~~~~~~~~~~~~~~~ 179 (485)
T TIGR00711 155 ----------------------------WRWIFLINVPIGIIVVVVAFFILPR 179 (485)
T ss_pred ----------------------------ceehhhhhhHHHHHHHHHHHHHcCC
Confidence 9999999888877776666555443
No 25
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.53 E-value=7.1e-14 Score=133.36 Aligned_cols=164 Identities=18% Similarity=0.246 Sum_probs=132.7
Q ss_pred HHHHHhhhhHHHHHhcHH-HHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHH
Q 017795 143 FSLVLASGSGLTVIDNLG-QICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFAL 219 (366)
Q Consensus 143 ~~~~~~~~~~~~~~~~l~-~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~ 219 (366)
++.++.......+...+| .+.+++|.+..+. ..+...++..++.+.+|+++||+|||+.. ..+.++.+++.
T Consensus 3 l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l------~~~~~~~~~~~ 76 (352)
T PF07690_consen 3 LAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVL------IIGLLLFALGS 76 (352)
T ss_dssp HHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHH------HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeE------eehhhhhhhHH
Confidence 344445555555666777 6778899887765 78888899999999999999999987654 66666666664
Q ss_pred HHHHh-cchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhhhhhhhh
Q 017795 220 LYYAI-GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGL 298 (366)
Q Consensus 220 ~l~~~-~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~~~~~~~ 298 (366)
++... .+...++++.++.|++.+...+...++++|.++.++++..+++......+|..+ +|.+++++.+..+
T Consensus 77 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~-g~~l~~~l~~~~~------ 149 (352)
T PF07690_consen 77 LLLAFASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSIL-GPLLGGFLISYFG------ 149 (352)
T ss_dssp HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHH-HHHHHHHCCCHCH------
T ss_pred HHhhhhhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhc-ccchhhhhhhccc------
Confidence 44333 555578889999999999999999999999999999999999999999999996 9999999998777
Q ss_pred hhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHH
Q 017795 299 LWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLI 345 (366)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~ 345 (366)
|++.|++.+++++++.++...
T Consensus 150 --------------------------~~~~~~~~~~~~~~~~il~~~ 170 (352)
T PF07690_consen 150 --------------------------WRWAFLISAILSLIAAILFIL 170 (352)
T ss_dssp --------------------------HCCHHHHHHHHHHHHHHHHHC
T ss_pred --------------------------cccccccccchhhhhhhhHhh
Confidence 999999999988887764333
No 26
>PRK10054 putative transporter; Provisional
Probab=99.53 E-value=4.3e-13 Score=132.05 Aligned_cols=173 Identities=11% Similarity=0.054 Sum_probs=131.7
Q ss_pred HHHHHHHHHHHhhhhHHHHHhcHHHHH-HHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHH
Q 017795 137 DFLLLFFSLVLASGSGLTVIDNLGQIC-QSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQV 213 (366)
Q Consensus 137 ~~~ll~~~~~~~~~~~~~~~~~l~~i~-~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~ 213 (366)
++|.+.+..++..........++|.+. +++|++..++ ..++..+...++++..|+++||+|||+.. ..+.+
T Consensus 8 ~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~------~~~~~ 81 (395)
T PRK10054 8 STSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYM------LLAIT 81 (395)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhH------HHHHH
Confidence 477777777777777667777777766 5689998776 77777888899999999999999998654 45555
Q ss_pred HHHHHHHHHH-hcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhh
Q 017795 214 VMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYA 292 (366)
Q Consensus 214 ~~~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~ 292 (366)
+.+++.+++. ..+...++++..+.|.+.+...+...++.+|.++++++++++++.+...++|..+ ||.+++++++ .+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~i-gp~l~~~l~~-~g 159 (395)
T PRK10054 82 AFASGFIAIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTV-GPPLGTLLVM-QS 159 (395)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH-hc
Confidence 5555555554 3344445555666676666666777888999999999999999999999999996 9999999874 44
Q ss_pred hhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHHhh
Q 017795 293 EKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHR 349 (366)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~ 349 (366)
|+..|++.+++++++.++..++.+|
T Consensus 160 --------------------------------~~~~f~~~~~~~~i~~i~~~~~~~~ 184 (395)
T PRK10054 160 --------------------------------INLPFWLAAICSAFPLVFIQIWVQR 184 (395)
T ss_pred --------------------------------cCcHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999998888777766555554433
No 27
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.52 E-value=1.2e-13 Score=133.01 Aligned_cols=162 Identities=17% Similarity=0.149 Sum_probs=133.1
Q ss_pred hhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH-h
Q 017795 148 ASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-I 224 (366)
Q Consensus 148 ~~~~~~~~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~-~ 224 (366)
.......+....|++.+++|++.... ..+...++..++.+++|+++||+|||+.. ..+.++.+++..+++ .
T Consensus 6 ~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~------~~~~~~~~~~~~~~~~~ 79 (399)
T TIGR00893 6 NYLDRANLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTL------AVFIVIWGVFTGLQAFA 79 (399)
T ss_pred HHHHHHhhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceee------HHHHHHHHHHHHHHHHH
Confidence 33444556667788889999987765 78888999999999999999999998876 556666666655554 4
Q ss_pred cchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhhhhhhhhhhhccC
Q 017795 225 GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNG 304 (366)
Q Consensus 225 ~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~~~~~~~~~~~~~ 304 (366)
.+...++++.++.|++.+..++....+++|.+++++|+...++......+|..+ +|.+++.+.+..+
T Consensus 80 ~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~-~~~~~~~l~~~~~------------ 146 (399)
T TIGR00893 80 GAYVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGII-GGPLVGWILIHFS------------ 146 (399)
T ss_pred cCHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHH-HHHHHHHHHHhCC------------
Confidence 466778889999999999999999999999999999999999999999999996 9999999988776
Q ss_pred CCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHHh
Q 017795 305 NMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVH 348 (366)
Q Consensus 305 ~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~ 348 (366)
|++.|++.++++++..++..++.+
T Consensus 147 --------------------~~~~~~~~~~~~~~~~~~~~~~~~ 170 (399)
T TIGR00893 147 --------------------WQWAFIIEGVLGIIWGVLWLKFIP 170 (399)
T ss_pred --------------------chHHHHHHHHHHHHHHHHhhheec
Confidence 999999988877776665555443
No 28
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.52 E-value=1.1e-12 Score=128.77 Aligned_cols=171 Identities=17% Similarity=0.113 Sum_probs=130.8
Q ss_pred HHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHH
Q 017795 140 LLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAF 217 (366)
Q Consensus 140 ll~~~~~~~~~~~~~~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~ 217 (366)
+.++..++............|.+.+++|++..+. ..+...++..++.+.+|+++||+|||+.. ..+.++..+
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~------~~~~~~~~~ 92 (406)
T PRK11551 19 LCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRIL------IVSVALFGL 92 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhH------HHHHHHHHH
Confidence 3333444444444445556788999999988765 78888889999999999999999998765 445555555
Q ss_pred HHHHHH-hcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhhhhhh
Q 017795 218 ALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQA 296 (366)
Q Consensus 218 ~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~~~~~ 296 (366)
+.++.. ..+...+++..++.|++.+...+...+++.|.+++++++.+.++.+....+|..+ +|.+++.+.+..+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~---- 167 (406)
T PRK11551 93 FSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGAL-ASVIGVLAAGDAA---- 167 (406)
T ss_pred HHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHccccC----
Confidence 544444 4556677888899999999888888999999999999999999999999999996 8988888777665
Q ss_pred hhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHHhh
Q 017795 297 GLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHR 349 (366)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~ 349 (366)
|++.|++.+++.++..++...+.++
T Consensus 168 ----------------------------~~~~~~~~~~~~~~~~~~~~~~l~~ 192 (406)
T PRK11551 168 ----------------------------WRHIFYVGGVGPLLLVPLLMRWLPE 192 (406)
T ss_pred ----------------------------HHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9999998877666655544444444
No 29
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.50 E-value=1.1e-12 Score=128.39 Aligned_cols=168 Identities=13% Similarity=0.114 Sum_probs=132.7
Q ss_pred HHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHH
Q 017795 143 FSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALL 220 (366)
Q Consensus 143 ~~~~~~~~~~~~~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~ 220 (366)
+..+........+...+|++.+++|.+.... ..+.+.++..++.++.|+++||+|||+.. ..+.++.+++.+
T Consensus 10 ~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l------~~~~~~~~i~~~ 83 (392)
T PRK10473 10 ALVLLYPAGIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVA------IPGAALFIIASL 83 (392)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHH------HHHHHHHHHHHH
Confidence 3334444444556678999999999988765 67788888899999999999999987644 556666666666
Q ss_pred HHH-hcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhhhhhhhhh
Q 017795 221 YYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLL 299 (366)
Q Consensus 221 l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~~~~~~~~ 299 (366)
++. ..+...+++..++.|++.+..++...+++.|.++.++|+...++.+....+|..+ +|.+++.+.+..+
T Consensus 84 ~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~-~~~i~~~l~~~~g------- 155 (392)
T PRK10473 84 LCSLAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVL-APVLGHLIMLKFP------- 155 (392)
T ss_pred HHHHhCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCcC-------
Confidence 555 3445567778889999988888888999999999999999999999999999885 8999998887665
Q ss_pred hhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHHhh
Q 017795 300 WKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHR 349 (366)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~ 349 (366)
|++.|++.++++++..++.+...++
T Consensus 156 -------------------------~~~~~~~~~~~~~i~~~~~~~~~~~ 180 (392)
T PRK10473 156 -------------------------WQSLFYTMAAMGILVLLLSLFILKE 180 (392)
T ss_pred -------------------------hHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999988887777666555444
No 30
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.50 E-value=5.7e-13 Score=130.13 Aligned_cols=160 Identities=10% Similarity=0.014 Sum_probs=124.6
Q ss_pred hhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHh-cc
Q 017795 150 GSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAI-GW 226 (366)
Q Consensus 150 ~~~~~~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~-~~ 226 (366)
.....+...+|++.+++|.+..+. ..+.+.++..++.+..|+++||+|||+.. .........+.+.... .+
T Consensus 5 ~~~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~------~~~~~~~~~~~~~~~~~~~ 78 (368)
T TIGR00903 5 AIWVTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFL------FGSLATFAAAAGRLLDPFN 78 (368)
T ss_pred HHHHHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHH------HHHHHHHHHHHHHHHHhcc
Confidence 344567778999999999998776 78888899999999999999999987543 3333333333222222 45
Q ss_pred hhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhhhhhhhhhhhccCCC
Q 017795 227 PGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNM 306 (366)
Q Consensus 227 ~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~~~~~~~~~~~~~~~ 306 (366)
...+++++++.|++.+. .......++|.+++++|+++.++...+.++|..+ ++.+++++.+..+
T Consensus 79 ~~~l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l-~~~~~~~l~~~~g-------------- 142 (368)
T TIGR00903 79 YEWLLACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIF-ALAAGLKIYTAGG-------------- 142 (368)
T ss_pred HHHHHHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHccc--------------
Confidence 66888999999999886 4455556699999999999999999999999996 8999999987666
Q ss_pred CCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHHhh
Q 017795 307 LPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHR 349 (366)
Q Consensus 307 ~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~ 349 (366)
||+.|++.+++.++..++..+..++
T Consensus 143 ------------------Wr~~f~~~~~l~~~~~~~~~~~lp~ 167 (368)
T TIGR00903 143 ------------------LQLLIIPIAAVAAAGIILVLAALPA 167 (368)
T ss_pred ------------------hHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999888887776666655543
No 31
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.50 E-value=5.1e-13 Score=128.37 Aligned_cols=164 Identities=14% Similarity=0.204 Sum_probs=128.2
Q ss_pred HHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHH
Q 017795 144 SLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLY 221 (366)
Q Consensus 144 ~~~~~~~~~~~~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l 221 (366)
...+..+..+.....+|.+.+++|.+..+. ..+.+.++..++.+.+|+++||+|||+.+ ..+.++.+++.++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~------~~~~~~~~~~~~~ 84 (377)
T TIGR00890 11 IMCFTSGYVYTWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVA------MLGGILYGLGFTF 84 (377)
T ss_pred HHHHHhhHHhhhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchh------HHhHHHHHHHHHH
Confidence 333333444556677899999999988776 88899999999999999999999998776 5666666666666
Q ss_pred HH-hcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhhhhhhhhhh
Q 017795 222 YA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLW 300 (366)
Q Consensus 222 ~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~~~~~~~~~ 300 (366)
.+ ..+...++++.++.|++.+..++.....+.+.++ ++++.+.++...+..+|..+ ++++.+.+.+..+
T Consensus 85 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~-------- 154 (377)
T TIGR00890 85 YAIADSLAALYLTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFI-LSPLITSVINLEG-------- 154 (377)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhH-HHHHHHHHHhccc--------
Confidence 55 4455677788889999988777777777888886 67999999999999999986 5666777766555
Q ss_pred hccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHH
Q 017795 301 KYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVV 347 (366)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~ 347 (366)
||+.|++.++++++.++..+++.
T Consensus 155 ------------------------~~~~f~~~~~~~~~~~~~~~~~~ 177 (377)
T TIGR00890 155 ------------------------VPAAFIYMGIIFLLVIVLGAFLI 177 (377)
T ss_pred ------------------------HHHHHHHHHHHHHHHHHHHHHhe
Confidence 99999999988877766665554
No 32
>PRK03699 putative transporter; Provisional
Probab=99.49 E-value=2.2e-12 Score=126.62 Aligned_cols=179 Identities=16% Similarity=0.155 Sum_probs=132.3
Q ss_pred hhHHHHHHHHHHHhhhhHHHHHhcHHHHHH-HhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHH
Q 017795 135 KADFLLLFFSLVLASGSGLTVIDNLGQICQ-SLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVA 211 (366)
Q Consensus 135 ~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~-~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~ 211 (366)
++.+|++.+..++.......+..|+|.+.+ .+|++..+. ..+.+.++..+|+++.|+++||+++|+.. ...
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l------~~~ 277 (394)
T PRK03699 204 GIGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRIL------TVL 277 (394)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHH------HHH
Confidence 456777777777766666677889999985 479887655 77888889999999999999999887543 333
Q ss_pred HHHHHHHHHHHH-hcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhh
Q 017795 212 QVVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDY 290 (366)
Q Consensus 212 ~~~~~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~ 290 (366)
..+.++..+++. ..+...+.+..++.|++.++.++...+...+..+ ++++...+.......+|+.+ +|.+.|++.|.
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i-~p~~~G~l~~~ 355 (394)
T PRK03699 278 AGLALVLMYLFVNTDDPSHLLYAILGLGFFSSAIYTTIITLGSQQTK-VASPKLVNFILTCGTIGTML-TFVVTSPIVAH 355 (394)
T ss_pred HHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHH-HHHHHHHHHHH
Confidence 333333333333 3344455566777888888878887777777664 55678888888889999996 99999999998
Q ss_pred hhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHHhhcHHH
Q 017795 291 YAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHRTKSV 353 (366)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~~r~~ 353 (366)
.+ ++.++++.+++++++.++++.+.+-.|++
T Consensus 356 ~g--------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (394)
T PRK03699 356 FG--------------------------------LQAALLTANGLYAVVFVMCILLGFVSKHR 386 (394)
T ss_pred hC--------------------------------chhhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 77 88899999888888776666555444443
No 33
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.49 E-value=4.2e-13 Score=129.39 Aligned_cols=184 Identities=16% Similarity=0.129 Sum_probs=139.0
Q ss_pred HHHHhhhhHHHHHHHHHHHhhhhHHHHHhcHHHHHHH-hCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchh
Q 017795 129 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRP 205 (366)
Q Consensus 129 ~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~-~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~ 205 (366)
++...++++.|.+.+.|+...+....+..++|++.++ +|.++..+ ..++..+.+.+.|+++|++|||+|.++..
T Consensus 211 ~~~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~--- 287 (417)
T COG2223 211 LKAVFSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVT--- 287 (417)
T ss_pred HHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHH---
Confidence 4557789999999999999999999999999998865 89888775 88888899999999999999999886654
Q ss_pred HHHHHHHHHHHHHHHHHHhc--------chhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHH
Q 017795 206 VAMAVAQVVMAFALLYYAIG--------WPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSL 277 (366)
Q Consensus 206 ~~~~~~~~~~~~~~~l~~~~--------~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~ 277 (366)
.+.+..++++..+.... +....+...+..+++.|.-....+-+++.+|+ ++.|...|+....+++|++
T Consensus 288 ---~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~-~~~G~v~G~vga~G~lGGf 363 (417)
T COG2223 288 ---LAVFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFP-KETGAVTGIVGAIGGLGGF 363 (417)
T ss_pred ---HHHHHHHHHHHHHHHccccccccCcchHHHHHHHHHHHHHhccCcchheeechHHHH-hhhhHHHHHHHHhcccccc
Confidence 44444444444443321 11222222333344444444445556666673 4889999999999999999
Q ss_pred HhhhhHHHHHhhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHHhhcH
Q 017795 278 IFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHRTK 351 (366)
Q Consensus 278 i~gp~i~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~~r 351 (366)
. =|...|..+|.++ +|...|++...+.+++.+.....+.|.|
T Consensus 364 ~-lp~~~g~~~~~tg-------------------------------~~~~~f~~~~~~~~~a~v~~~~~y~r~~ 405 (417)
T COG2223 364 F-LPLAFGVSLDLTG-------------------------------SYTGAFMLLLAFYLVALVLTWALYARRR 405 (417)
T ss_pred c-hhHHHHHHHHhcc-------------------------------cHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 6 5999999999998 4999999999999988888777766654
No 34
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.49 E-value=9.4e-13 Score=132.86 Aligned_cols=168 Identities=17% Similarity=0.232 Sum_probs=136.3
Q ss_pred HHHHHHHHHHHhhhhHHHHHhcHHHHHHH---hCCChhHH--HHHHHHHHHhhhhhhhhhhhhh-hhhhccCchhHHHHH
Q 017795 137 DFLLLFFSLVLASGSGLTVIDNLGQICQS---LGYADTSI--YVSMISIWNFLGRVGGGYFSEA-IVRKFAYPRPVAMAV 210 (366)
Q Consensus 137 ~~~ll~~~~~~~~~~~~~~~~~l~~i~~~---~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~-~grr~~~~R~~~~~~ 210 (366)
.+|.+++..++...+.+....++|.+.++ +|++..++ ..+.+.+...++++++|+++|| +|||+.. ..
T Consensus 11 ~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l------~~ 84 (475)
T TIGR00924 11 PLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTM------VL 84 (475)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHH------HH
Confidence 35667777777667777778889988765 78887665 7888889999999999999999 7998766 67
Q ss_pred HHHHHHHHHHHHHhc-chhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCc---hhhHHHHHHhHhhhhHHHhhhhHHHH
Q 017795 211 AQVVMAFALLYYAIG-WPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKS---FGALYNFLTLASPAGSLIFSGVIASG 286 (366)
Q Consensus 211 ~~~~~~~~~~l~~~~-~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~---~g~~~g~~~~~~~~G~~i~gp~i~G~ 286 (366)
+.++.++++++++.. +...++++.++.|+|.|...+...+++++.++.++ ++.++++.+.+.++|+.+ ||.++|+
T Consensus 85 ~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~i-g~~l~g~ 163 (475)
T TIGR00924 85 GGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFI-SPLLAGV 163 (475)
T ss_pred HHHHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHH-HHHHHHH
Confidence 777777787776643 44566677888899998888899999999998764 888999999999999996 9999999
Q ss_pred HhhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHH
Q 017795 287 IYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMS 343 (366)
Q Consensus 287 l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~ 343 (366)
+.+..+ |++.|++.++.++++.+..
T Consensus 164 l~~~~g--------------------------------~~~~f~~~~~~~~~~~l~~ 188 (475)
T TIGR00924 164 IAENYG--------------------------------YHVGFNLAAVGMVIGLLTF 188 (475)
T ss_pred HHHhcC--------------------------------hHHHHHHHHHHHHHHHHHH
Confidence 998776 9999998886665554433
No 35
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.49 E-value=1.9e-12 Score=122.91 Aligned_cols=169 Identities=22% Similarity=0.284 Sum_probs=138.0
Q ss_pred HHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHH
Q 017795 139 LLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMA 216 (366)
Q Consensus 139 ~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~ 216 (366)
+.+.+..++...........+|.+.+++|.+..+. ..+...++..++.+++|+++||+|||+.. ..+.++..
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~------~~~~~~~~ 75 (352)
T cd06174 2 LLLFLGFFLSGLDRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVL------LLGLLLFA 75 (352)
T ss_pred HHHHHHHHHHHHhhhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhh------HHHHHHHH
Confidence 34445555555566667777888999999887765 78888899999999999999999998755 66666666
Q ss_pred HHHHHHH-hcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhhhhh
Q 017795 217 FALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQ 295 (366)
Q Consensus 217 ~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~~~~ 295 (366)
++.++.. ..+...+++..++.|++.+..++...+++.|.+++++|++..++......+|..+ +|.+++.+.+..+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~--- 151 (352)
T cd06174 76 LGSLLLAFASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALL-GPLLGGLLAESLG--- 151 (352)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHH-HHHHHHHHHHHhh---
Confidence 6666655 3456677888999999999989999999999999999999999999999999996 9999999998776
Q ss_pred hhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHH
Q 017795 296 AGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIV 346 (366)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~ 346 (366)
|++.|++.+++.+++.+....+
T Consensus 152 -----------------------------~~~~~~~~~~~~~~~~~~~~~~ 173 (352)
T cd06174 152 -----------------------------WRWLFLILAILGLLLALLLLFL 173 (352)
T ss_pred -----------------------------HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999998888777766655443
No 36
>PRK03699 putative transporter; Provisional
Probab=99.48 E-value=2.2e-12 Score=126.59 Aligned_cols=169 Identities=12% Similarity=0.090 Sum_probs=132.5
Q ss_pred hHHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHH
Q 017795 136 ADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQV 213 (366)
Q Consensus 136 ~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~ 213 (366)
+.+|..++.+++.......+...+|++.+++|++..+. ..+...++..++.+++|+++||+|||+.. ..+.+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~------~~~~~ 80 (394)
T PRK03699 7 KLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQL------IFGFA 80 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH------HHHHH
Confidence 34666666666666666667778999999999988765 77788889999999999999999998654 55555
Q ss_pred HHHHHHHHHH-hcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhh
Q 017795 214 VMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYA 292 (366)
Q Consensus 214 ~~~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~ 292 (366)
+.+++.++.. ..+...+++..++.|++.|...+...+.+.|.++.++++...+..+....+|+.+ +|.+.+++.+...
T Consensus 81 ~~~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~-~~~~~~~l~~~~~ 159 (394)
T PRK03699 81 LMILAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMI-FPIIAAYLLARSI 159 (394)
T ss_pred HHHHHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHH-HHHHHHHHHhccc
Confidence 6666655555 3455567788899999988888888889999999899999999988888899886 8999888875432
Q ss_pred hhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHH
Q 017795 293 EKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVM 342 (366)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~ 342 (366)
+||+.|++.+++.++..++
T Consensus 160 -------------------------------gw~~~f~~~~~~~~~~~~~ 178 (394)
T PRK03699 160 -------------------------------EWYWVYACIGLVYVAIFIL 178 (394)
T ss_pred -------------------------------cHHHHHHHHHHHHHHHHHH
Confidence 2999999888776665443
No 37
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.48 E-value=1.8e-12 Score=127.60 Aligned_cols=159 Identities=9% Similarity=0.029 Sum_probs=125.6
Q ss_pred hHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH-hcch
Q 017795 151 SGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IGWP 227 (366)
Q Consensus 151 ~~~~~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~-~~~~ 227 (366)
....+...+|++.+++|.+.... ..+.+.++..++.++.|+++||+|||+.+ ..+.++.+++.++.. ..+.
T Consensus 28 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l------~~~~~~~~~~~~~~~~~~~~ 101 (406)
T PRK15402 28 ANDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVM------LAGVAFFILTCLAILLAQSI 101 (406)
T ss_pred hhhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHH------HHHHHHHHHHHHHHHHHccH
Confidence 34455667888999999987765 77888889999999999999999997654 555555555555544 4455
Q ss_pred hHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhhhhhhhhhhhccCCCC
Q 017795 228 GEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNML 307 (366)
Q Consensus 228 ~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~~~~~~~~~~~~~~~~ 307 (366)
..+++..++.|++.+...+...+.+.|.+++++++...++......+|..+ ||.+++.+.+..+
T Consensus 102 ~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~i~~~l~~~~~--------------- 165 (406)
T PRK15402 102 EQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLL-GPLVGAALIHVLP--------------- 165 (406)
T ss_pred HHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHccC---------------
Confidence 667788889999988877888889999999999999889888888888885 9999999988666
Q ss_pred CcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHHh
Q 017795 308 PVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVH 348 (366)
Q Consensus 308 ~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~ 348 (366)
|++.|++.+++++++.+......+
T Consensus 166 -----------------w~~~~~~~~~~~~~~~~~~~~~~~ 189 (406)
T PRK15402 166 -----------------WRGMFVLFAALAALSFFGLWRAMP 189 (406)
T ss_pred -----------------ccHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999988888776665544433
No 38
>TIGR00895 2A0115 benzoate transport.
Probab=99.48 E-value=8.1e-13 Score=128.05 Aligned_cols=167 Identities=14% Similarity=0.111 Sum_probs=129.9
Q ss_pred HHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHH
Q 017795 144 SLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLY 221 (366)
Q Consensus 144 ~~~~~~~~~~~~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l 221 (366)
.+++...........+|.+.+++|++.... ..++..++..++.++.|+++||+|||+.. ..+.++.+++.++
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~------~~~~~~~~~~~~~ 98 (398)
T TIGR00895 25 IMLMDGYDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVL------LWSILLFSVFTLL 98 (398)
T ss_pred HHHHHHHHHHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHH------HHHHHHHHHHHHH
Confidence 333333334455667888899999987665 67778888899999999999999987654 5555555555555
Q ss_pred HH-hcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhhhhhhhhhh
Q 017795 222 YA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLW 300 (366)
Q Consensus 222 ~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~~~~~~~~~ 300 (366)
.. ..+...+++..++.|++.+..++...++++|.++.++++.+.++......+|..+ +|.++|++.+..+
T Consensus 99 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~-~~~~~~~l~~~~g-------- 169 (398)
T TIGR00895 99 CALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAV-GGFLAGWLIPVFG-------- 169 (398)
T ss_pred HHHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHH-HHHHHHHHhhccc--------
Confidence 44 3455567788889999999989999999999999999999999999999999996 9999999988776
Q ss_pred hccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHHhh
Q 017795 301 KYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHR 349 (366)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~ 349 (366)
|++.|++.++++.+..++...+.++
T Consensus 170 ------------------------~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (398)
T TIGR00895 170 ------------------------WRSLFYVGGIAPLLLLLLLMRFLPE 194 (398)
T ss_pred ------------------------ceeehhhhhhHHHHHHHHHHHhCCC
Confidence 9999988876666655555554443
No 39
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.48 E-value=1.8e-12 Score=126.89 Aligned_cols=172 Identities=9% Similarity=0.102 Sum_probs=132.6
Q ss_pred HHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHH
Q 017795 139 LLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMA 216 (366)
Q Consensus 139 ~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~ 216 (366)
++.....++.......+...+|++.+++|.+.... ..+...++..++.+++|+++||+|||+.+ ..+.++.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~------~~~~~~~~ 84 (394)
T PRK11652 11 FMLVLLVAVGQMAQTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVI------LVGMSIFI 84 (394)
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHH------HHHHHHHH
Confidence 44445555555555666778999999999988766 77888899999999999999999997654 45555555
Q ss_pred HHHHHHH-hcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhhhhh
Q 017795 217 FALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQ 295 (366)
Q Consensus 217 ~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~~~~ 295 (366)
++.++.. ..+...+++.+++.|++.+...+.......|.++.++++.+.+..+++..++..+ +|.++|.+.+..+
T Consensus 85 ~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~i~~~l~~~~g--- 160 (394)
T PRK11652 85 LGTLVALFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLL-APLIGGLLTTLFG--- 160 (394)
T ss_pred HHHHHHHHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhccC---
Confidence 5555544 3455667788889999888777777778899999899999999999999999986 9999999988766
Q ss_pred hhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHHhh
Q 017795 296 AGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHR 349 (366)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~ 349 (366)
|++.|++.+++.++..++..++.++
T Consensus 161 -----------------------------~~~~f~~~~~~~~~~~~~~~~~~~~ 185 (394)
T PRK11652 161 -----------------------------WRACYLFLLLLGAGVTFSMARWMPE 185 (394)
T ss_pred -----------------------------hHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 9999998887766555544444333
No 40
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.48 E-value=2.7e-12 Score=126.79 Aligned_cols=148 Identities=14% Similarity=0.104 Sum_probs=119.3
Q ss_pred HHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHH
Q 017795 138 FLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVM 215 (366)
Q Consensus 138 ~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~ 215 (366)
+...++.+++...........+|.+.+++|.+..+. ..++..++..++.++.|+++||+|||+.. ..+.++.
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l------~~~~~~~ 93 (426)
T PRK12307 20 LFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLM------MWSIVAY 93 (426)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHH------HHHHHHH
Confidence 444455555544555556667788889999987765 77888899999999999999999998765 6666666
Q ss_pred HHHHHHHH-hcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhh
Q 017795 216 AFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYA 292 (366)
Q Consensus 216 ~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~ 292 (366)
+++.++.. ..+...+++++++.|++.+..++....++.|.+++++|+.+.++...+..+|..+ +|.+.+.+.+..+
T Consensus 94 ~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~-~~~l~~~l~~~~~ 170 (426)
T PRK12307 94 SVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNII-AAYFMPSFAEAYG 170 (426)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHH-HHHHHHHHcccCC
Confidence 66666655 4456678889999999999988999999999999999999999999999999996 8888888877666
No 41
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.48 E-value=1.1e-12 Score=130.20 Aligned_cols=189 Identities=12% Similarity=0.115 Sum_probs=138.6
Q ss_pred HHHHhhhhHHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCCh--------h--HHHHHHHHHHHhhhhhhhhhhhhhhhh
Q 017795 129 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYAD--------T--SIYVSMISIWNFLGRVGGGYFSEAIVR 198 (366)
Q Consensus 129 ~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~~~--------~--~~~~sl~~i~~~~g~~~~G~lsD~~gr 198 (366)
..+.+|++.+|.+++..++..........+++.+.++.|++. + ....++..+...++.+..|+++||+|+
T Consensus 201 ~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~ 280 (418)
T TIGR00889 201 AFILFKNKRMAIFFFFSMLLGAPLQITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGI 280 (418)
T ss_pred HHHHhcCCCeeeHHHHHHHHHhHHHHHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 345778888887777666654444445556677777777553 1 226777778888999999999999998
Q ss_pred hccCchhHHHHHHHHHHHHHHHHHHhc--ch---hHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHH-hHh
Q 017795 199 KFAYPRPVAMAVAQVVMAFALLYYAIG--WP---GEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLT-LAS 272 (366)
Q Consensus 199 r~~~~R~~~~~~~~~~~~~~~~l~~~~--~~---~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~-~~~ 272 (366)
|+.+ ..+.++.+++..++... +. ..+++..++.|++.+...+.....++|.+|++.+|+++|+.+ ...
T Consensus 281 r~~l------~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~ 354 (418)
T TIGR00889 281 KKVM------LLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCN 354 (418)
T ss_pred HHHH------HHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
Confidence 7655 55666666655444431 11 234566778888888777777888999999999999999997 567
Q ss_pred hhhHHHhhhhHHHHHhhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHHhhc
Q 017795 273 PAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHRT 350 (366)
Q Consensus 273 ~~G~~i~gp~i~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~~ 350 (366)
.+|+.+ ||.++|+++|..+.... .+|+.+|++.++++++++++..++.++.
T Consensus 355 ~lg~~i-Gp~l~G~l~~~~g~~~~--------------------------~~~~~~f~~~~~~~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 355 GFGSLL-GYILSGVMVEKMFAYGT--------------------------FDWQTMWLFFAGYIAILAVLFMIFFKYS 405 (418)
T ss_pred hhHHHH-HHHHHHHHHHHhccccC--------------------------CchHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 899996 99999999998652110 1399999999988888887777776554
No 42
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.48 E-value=3.6e-12 Score=124.98 Aligned_cols=156 Identities=12% Similarity=0.124 Sum_probs=118.9
Q ss_pred HHHHhcHHHHHHHhCCChhHHHHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH-hcchhHHH
Q 017795 153 LTVIDNLGQICQSLGYADTSIYVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IGWPGEIY 231 (366)
Q Consensus 153 ~~~~~~l~~i~~~~g~~~~~~~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~-~~~~~~l~ 231 (366)
.....+++.+.++.|++......+.+.++..++++..|+++||+++|+.. ..+..+++++.+++. ..+...++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~ 306 (399)
T PRK05122 233 GTIATFITLYYAARGWDGAALALTLFGVAFVGARLLFGNLINRLGGLRVA------IVSLLVEILGLLLLWLAPSPWMAL 306 (399)
T ss_pred HHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHHHHHhccHHHH------HHHHHHHHHHHHHHHHhccHHHHH
Confidence 34455677777777775444466778888899999999999999876543 445555555555544 33445566
Q ss_pred HHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhhhhhhhhhhhccCCCCCccc
Q 017795 232 VTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSF 311 (366)
Q Consensus 232 ~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~~~~~~~~~~~~~~~~~~~~ 311 (366)
+..++.|++.+..++.....+.|.++++++|+++++.+....+|..+ +|.+.|++.|..+
T Consensus 307 ~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~-~~~~~g~l~~~~g------------------- 366 (399)
T PRK05122 307 IGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGI-TGPLAGLVASWFG------------------- 366 (399)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHcC-------------------
Confidence 67788899988877777777889999999999999999999999986 8999999998776
Q ss_pred CCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHH
Q 017795 312 RDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVV 347 (366)
Q Consensus 312 ~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~ 347 (366)
|++.|++.+++++++.++...+.
T Consensus 367 -------------~~~~~~~~~~~~~~~~~~~~~~~ 389 (399)
T PRK05122 367 -------------YPSIFLAAALAALLGLALTWLLY 389 (399)
T ss_pred -------------HHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999998888887766655443
No 43
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.47 E-value=3.4e-12 Score=124.27 Aligned_cols=148 Identities=13% Similarity=0.193 Sum_probs=120.5
Q ss_pred HHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHH
Q 017795 138 FLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVM 215 (366)
Q Consensus 138 ~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~ 215 (366)
+...++.+++............|++.+++|++..+. ..++..++..++.++.|+++||+|||+.+ ..+.++.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~------~~~~~~~ 87 (405)
T TIGR00891 14 FSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPM------VTSIVLF 87 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH------HHHHHHH
Confidence 445556666666666667777889999999987766 78888899999999999999999998655 5555666
Q ss_pred HHHHHHHH-hcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhh
Q 017795 216 AFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYA 292 (366)
Q Consensus 216 ~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~ 292 (366)
+++.++.. ..+...+++..++.|++.+..++...+++.|.+++++++.+.++.+....+|..+ +|.+++.+.+..+
T Consensus 88 ~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~l~~~l~~~~~ 164 (405)
T TIGR00891 88 SAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVV-AAQVYSLVVPVWG 164 (405)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHH-HHHHHHHHHHhcC
Confidence 66655554 4456677888999999999989999999999999999999999999999999996 8999998877554
No 44
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.47 E-value=2.3e-12 Score=129.19 Aligned_cols=193 Identities=13% Similarity=0.083 Sum_probs=132.9
Q ss_pred CCHHHHhhhhHHHHHHHHHHHhhhhHHHHHhcHHHHHHH-hCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCc
Q 017795 127 FTLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYP 203 (366)
Q Consensus 127 ~~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~-~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~ 203 (366)
.++++.++++.+|.+.+..++.......+..++|.+.++ +|++.... ..+++.++..++.++.|+++||+++|+...
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~ 331 (465)
T TIGR00894 252 LPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLS 331 (465)
T ss_pred CCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 358889999999999998888888888888899998755 78887655 677888999999999999999998776554
Q ss_pred hhHH----HHHHHHHHHHHHHHHHh-c-chhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHH
Q 017795 204 RPVA----MAVAQVVMAFALLYYAI-G-WPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSL 277 (366)
Q Consensus 204 R~~~----~~~~~~~~~~~~~l~~~-~-~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~ 277 (366)
|... ..++..+.++..+.... . +....+++..+.+.+.+...+.......|.. ++..|...++.+..+.+|+.
T Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~l~~~ 410 (465)
T TIGR00894 332 LTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVLINSLDLA-PRFLGFIKGITGLPGFIGGL 410 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhhhhchhhcC-hhHHHHHHHHHHHHHHHHHH
Confidence 4322 12221111111111121 1 2222333344444444444444444555655 45899999999999999999
Q ss_pred HhhhhHHHHHhhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHHhhc
Q 017795 278 IFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHRT 350 (366)
Q Consensus 278 i~gp~i~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~~ 350 (366)
+ +|.+.|++.|.... + .|..+|++.+++++++.++..++....
T Consensus 411 i-~p~l~g~~~~~~~~--~---------------------------~~~~~f~~~~~~~~i~~i~~~~~~~~~ 453 (465)
T TIGR00894 411 I-ASTLAGNILSQDSK--N---------------------------VWLIVFLIMAFVNILCVIFYLIFGSAE 453 (465)
T ss_pred H-HHHhhheeeCCCCc--h---------------------------HHHHHHHHHHHHHHHHHHHeeeeecce
Confidence 6 89999998875421 0 399999999988888877766544333
No 45
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.47 E-value=1.1e-12 Score=127.40 Aligned_cols=159 Identities=18% Similarity=0.230 Sum_probs=130.4
Q ss_pred HHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH-hcchh
Q 017795 152 GLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IGWPG 228 (366)
Q Consensus 152 ~~~~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~-~~~~~ 228 (366)
...+...+|.+.+++|.+..+. ..+...++..++++++|+++||+|||+.. ..+.++.+++.+++. ..+..
T Consensus 7 ~~~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~------~~~~~~~~i~~~~~~~~~~~~ 80 (377)
T PRK11102 7 IDMYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVI------LGGTLVFALAAVACALAQTID 80 (377)
T ss_pred HHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHH------HHHHHHHHHHHHHHHHHccHH
Confidence 3445678899999999988766 77888899999999999999999987654 556666666665554 44556
Q ss_pred HHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhhhhhhhhhhhccCCCCC
Q 017795 229 EIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLP 308 (366)
Q Consensus 229 ~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~~~~~~~~~~~~~~~~~ 308 (366)
.+++..++.|++.+...+...+++.|.++.++++.+.++.+....+|..+ +|.+++.+.+..+
T Consensus 81 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~l~~~~~---------------- 143 (377)
T PRK11102 81 QLIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLL-APIIGGWLLVWFS---------------- 143 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHcC----------------
Confidence 77788889999999888888999999999999999999999999999996 9999999998776
Q ss_pred cccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHHhh
Q 017795 309 VSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHR 349 (366)
Q Consensus 309 ~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~ 349 (366)
|++.|++.++++++..++..+..++
T Consensus 144 ----------------~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (377)
T PRK11102 144 ----------------WHAIFWVLALAAILAAALVFFFIPE 168 (377)
T ss_pred ----------------hHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 9999999888887776665554443
No 46
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.47 E-value=4.2e-12 Score=124.44 Aligned_cols=172 Identities=15% Similarity=0.160 Sum_probs=131.5
Q ss_pred HHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhH-------HHHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHH
Q 017795 137 DFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTS-------IYVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMA 209 (366)
Q Consensus 137 ~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~~~~~-------~~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~ 209 (366)
.+..+++..++.......+...+|.+.+++|.+..+ ...++..+...++.+++|+++||++||+.. .
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~------~ 88 (408)
T PRK09874 15 NLTVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIML------L 88 (408)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHH------H
Confidence 455666666666666666777899999999987532 256777788899999999999999987654 4
Q ss_pred HHHHHHHHHHHHHH-hcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHh
Q 017795 210 VAQVVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIY 288 (366)
Q Consensus 210 ~~~~~~~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~ 288 (366)
.+.++.+++.+++. ..+...+++..++.|++.+ ..+.....+.+.+++++++.+.++.+....+|..+ +|.++|.+.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~l~ 166 (408)
T PRK09874 89 RSALGMGIVMVLMGLAQNIWQFLILRALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALL-GPLAGGLLA 166 (408)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 55555555555544 3455567778888888754 45666678889999999999999999999999996 999999998
Q ss_pred hhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHHh
Q 017795 289 DYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVH 348 (366)
Q Consensus 289 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~ 348 (366)
+..+ |+++|++.+++.+++.+...++.+
T Consensus 167 ~~~~--------------------------------~~~~~~~~~~~~~~~~~~~~~~~~ 194 (408)
T PRK09874 167 DSYG--------------------------------LRPVFFITASVLFLCFLVTLFCIR 194 (408)
T ss_pred HHhC--------------------------------HHHHHHHHHHHHHHHHHHHHHHhc
Confidence 8776 999999998887777666655544
No 47
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.46 E-value=3.6e-12 Score=129.47 Aligned_cols=173 Identities=15% Similarity=0.181 Sum_probs=129.8
Q ss_pred Hhhhh-HHHHHHHHHHHhhhhHHHHHhcHHHHH-HHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhh-hhhhccCchhH
Q 017795 132 ALMKA-DFLLLFFSLVLASGSGLTVIDNLGQIC-QSLGYADTSI--YVSMISIWNFLGRVGGGYFSEA-IVRKFAYPRPV 206 (366)
Q Consensus 132 ~l~~~-~~~ll~~~~~~~~~~~~~~~~~l~~i~-~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~-~grr~~~~R~~ 206 (366)
.++++ .+|.+++..++.....+.+..+++.+. +++|++.+++ ..+.+........+++|+++|| +|||+.+
T Consensus 16 ~~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~---- 91 (500)
T PRK09584 16 AFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVI---- 91 (500)
T ss_pred hhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHH----
Confidence 34555 488888887887777777778888876 6789987765 4444444445556789999999 5998755
Q ss_pred HHHHHHHHHHHHHHHHHhc--chhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCc--hhhHHHHHHhHhhhhHHHhhhh
Q 017795 207 AMAVAQVVMAFALLYYAIG--WPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKS--FGALYNFLTLASPAGSLIFSGV 282 (366)
Q Consensus 207 ~~~~~~~~~~~~~~l~~~~--~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~--~g~~~g~~~~~~~~G~~i~gp~ 282 (366)
..+.++++++++++... ....++++.+++|+|.|...+...++++|.|+.++ ++.++++.+++.++|+.+ ||.
T Consensus 92 --~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~-gp~ 168 (500)
T PRK09584 92 --MLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFF-SML 168 (500)
T ss_pred --HHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHH-HHH
Confidence 66667777776666543 23345667788899988888888889999998653 556889999999999996 999
Q ss_pred HHHHHhhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHH
Q 017795 283 IASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMS 343 (366)
Q Consensus 283 i~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~ 343 (366)
+.|++.|..+ |++.|++.++...++.+..
T Consensus 169 i~g~l~~~~g--------------------------------~~~~F~i~~i~~~i~~i~~ 197 (500)
T PRK09584 169 ATPWLAAKYG--------------------------------WSVAFALSVVGMLITVVNF 197 (500)
T ss_pred HHHHHHHhhC--------------------------------HHHHHHHHHHHHHHHHHHH
Confidence 9999998877 9999998876555554433
No 48
>PRK12382 putative transporter; Provisional
Probab=99.46 E-value=6.4e-12 Score=122.95 Aligned_cols=154 Identities=12% Similarity=0.049 Sum_probs=119.9
Q ss_pred HHHhcHHHHHHHhCCChhHHHHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH-hcchhHHHH
Q 017795 154 TVIDNLGQICQSLGYADTSIYVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IGWPGEIYV 232 (366)
Q Consensus 154 ~~~~~l~~i~~~~g~~~~~~~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~-~~~~~~l~~ 232 (366)
....+.+.+.++.|++......+...++..+++++.|+++||+++|+.. ..+..+++++.+++. ..+....++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (392)
T PRK12382 234 VIGTFVSLYFASKGWAMAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVA------IVSLLVETVGLLLLWLAPTAWVALA 307 (392)
T ss_pred HHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeh------HHHHHHHHHHHHHHHHcccHHHHHH
Confidence 3455677777777876554455667777889999999999999987665 445555555555544 334445566
Q ss_pred HHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhhhhhhhhhhhccCCCCCcccC
Q 017795 233 TTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFR 312 (366)
Q Consensus 233 ~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~~~~~~~~~~~~~~~~~~~~~ 312 (366)
+.++.|++.+...+...+.+.+.++++++|+++|+.+....+|..+ ||.++|++.|..+
T Consensus 308 ~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i-g~~~~g~l~~~~g-------------------- 366 (392)
T PRK12382 308 GAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGV-SGPLAGMLATSFG-------------------- 366 (392)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhC--------------------
Confidence 7778888888877777888899999999999999999999999996 9999999999887
Q ss_pred CCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHH
Q 017795 313 DQETPTCLGSICYSITCGIMAGLCIIAMVMSLIV 346 (366)
Q Consensus 313 ~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~ 346 (366)
|++.|++.+++.+++.++.+..
T Consensus 367 ------------~~~~~~~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 367 ------------YPSVFLAGAISAVLGIIVTILS 388 (392)
T ss_pred ------------chHHHHHHHHHHHHHHHHHHhh
Confidence 9999999988877776665543
No 49
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.46 E-value=2.5e-12 Score=128.17 Aligned_cols=176 Identities=14% Similarity=0.134 Sum_probs=128.1
Q ss_pred hhHHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHH
Q 017795 135 KADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQ 212 (366)
Q Consensus 135 ~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~ 212 (366)
+..+|.+.+.+.+.......+....|.+. ++|++..+. ..+++.++..++.+..|+++||+|||+.. ..+.
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~------~~~~ 98 (438)
T TIGR00712 26 WQVFLGIFFGYAAYYLVRKNFALAMPYLV-EQGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFL------PAGL 98 (438)
T ss_pred HHHHHHHHHHHHHHHHHhccHHhhhHHHH-HcCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceeh------HHHH
Confidence 34445444544444444444455667655 468887765 77888899999999999999999998765 5555
Q ss_pred HHHHHHHHHHHh-----cchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHH
Q 017795 213 VVMAFALLYYAI-----GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGI 287 (366)
Q Consensus 213 ~~~~~~~~l~~~-----~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l 287 (366)
++.+++.++... .+...+++..++.|++.|..++.....+.|.++++++|++.++.+.+..+|+.+ +|.+.+.+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~-~~~l~~~~ 177 (438)
T TIGR00712 99 ILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGI-PPLLVLLG 177 (438)
T ss_pred HHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHH-HHHHHHHH
Confidence 555555554432 123345667788899988888888888999999999999999999999999996 78877765
Q ss_pred hhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHHhh
Q 017795 288 YDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHR 349 (366)
Q Consensus 288 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~ 349 (366)
.+... .||++|++.++++++..++.+++.++
T Consensus 178 ~~~~~-------------------------------~w~~~f~~~~~~~~i~~~~~~~~~~~ 208 (438)
T TIGR00712 178 MAWFN-------------------------------DWHAALYFPAICAIIVALFAFAMMRD 208 (438)
T ss_pred HHHhh-------------------------------hhHHHHHHHHHHHHHHHHHHHHhccC
Confidence 55332 29999999998888876666655544
No 50
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.46 E-value=1.7e-12 Score=129.48 Aligned_cols=184 Identities=13% Similarity=0.099 Sum_probs=129.9
Q ss_pred CHHHHhhhhHHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchh
Q 017795 128 TLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRP 205 (366)
Q Consensus 128 ~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~ 205 (366)
...+.+|+++.|++.+.+++.++...++..++|++.++ .++.... ...+..+...++|+++|+++||+|+++..
T Consensus 244 ~~~~vlk~~~~Wllslly~~tFG~fvg~s~~lp~~~~~-~~~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl--- 319 (462)
T PRK15034 244 DQLPVLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKT-QFPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVT--- 319 (462)
T ss_pred HHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH-HcChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHH---
Confidence 35678899999999999999999888888899999876 4443333 34555778889999999999999987654
Q ss_pred HHHHHHHHHHHHHHHH--HHhc-----chhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCC--------------------
Q 017795 206 VAMAVAQVVMAFALLY--YAIG-----WPGEIYVTTVLVGLSYGAHWAIVPAAASELFGL-------------------- 258 (366)
Q Consensus 206 ~~~~~~~~~~~~~~~l--~~~~-----~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~-------------------- 258 (366)
.++.+++.++... +... +.....+..+...++.|......+-+++++|+.
T Consensus 320 ---~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~ 396 (462)
T PRK15034 320 ---LINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREA 396 (462)
T ss_pred ---HHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHH
Confidence 3333333332211 1111 111222222222334444444455566666653
Q ss_pred -CchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHH
Q 017795 259 -KSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCI 337 (366)
Q Consensus 259 -~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~ 337 (366)
++.|...|+....+.+|+++ -|.+.|..++.++ +|...|++..+..+
T Consensus 397 ~~~~g~v~G~v~a~G~~Ggf~-~p~~~g~~~~~~g-------------------------------~~~~~~~~~~~~~~ 444 (462)
T PRK15034 397 VTETAAALGFISAIGAVGGFF-IPQAFGMSLNMTG-------------------------------SPVGAMKVFLIFYI 444 (462)
T ss_pred HHHHHHHHHHHHHHHHcccch-hhHHHHHHHHHcC-------------------------------CcHHHHHHHHHHHH
Confidence 26889999999999999997 6999999999887 48999999999999
Q ss_pred HHHHHHHHHHhhc
Q 017795 338 IAMVMSLIVVHRT 350 (366)
Q Consensus 338 ~~~~~~~~~~~~~ 350 (366)
++.++.++.+.|.
T Consensus 445 ~~~~~~w~~y~r~ 457 (462)
T PRK15034 445 VCVLLTWLVYGRR 457 (462)
T ss_pred HHHHHHHHHhccC
Confidence 9999988877664
No 51
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.45 E-value=3e-12 Score=128.90 Aligned_cols=167 Identities=16% Similarity=0.235 Sum_probs=127.2
Q ss_pred HHHHHHHHHHHhhhhHHHHHhcHHHHHH-HhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhh-hhhccCchhHHHHHHH
Q 017795 137 DFLLLFFSLVLASGSGLTVIDNLGQICQ-SLGYADTSI--YVSMISIWNFLGRVGGGYFSEAI-VRKFAYPRPVAMAVAQ 212 (366)
Q Consensus 137 ~~~ll~~~~~~~~~~~~~~~~~l~~i~~-~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~-grr~~~~R~~~~~~~~ 212 (366)
.+|.+++..++.....+++..++|.+++ ++|++..++ ..+.+.....++.+++|+++||+ |||+.. .++.
T Consensus 10 ~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~i------liG~ 83 (493)
T PRK15462 10 AIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAV------MLGA 83 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHH------HHHH
Confidence 4666666666666677777788888875 479988766 67777788889999999999999 998755 6777
Q ss_pred HHHHHHHHHHHhc--chhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCC--chhhHHHHHHhHhhhhHHHhhhhHHHHHh
Q 017795 213 VVMAFALLYYAIG--WPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLK--SFGALYNFLTLASPAGSLIFSGVIASGIY 288 (366)
Q Consensus 213 ~~~~~~~~l~~~~--~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~--~~g~~~g~~~~~~~~G~~i~gp~i~G~l~ 288 (366)
++++++++++... ....++++..+.++|.|...+...++++|.|+++ +|.+++++.+...++|+.+ +|.+.|++.
T Consensus 84 il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~i-ap~l~g~L~ 162 (493)
T PRK15462 84 LLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSII-APIACGYAQ 162 (493)
T ss_pred HHHHHHHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHH-HHHHHHHHH
Confidence 7777777665532 2233455555666777776677788999999876 6999999999999999996 999999998
Q ss_pred hhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHH
Q 017795 289 DYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVM 342 (366)
Q Consensus 289 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~ 342 (366)
+..+ |++.|.+.++..+++.+.
T Consensus 163 ~~~G--------------------------------w~~~F~iaaigm~l~li~ 184 (493)
T PRK15462 163 EEYS--------------------------------WAMGFGLAAVGMIAGLVI 184 (493)
T ss_pred hhhC--------------------------------hHHHHHHHHHHHHHHHHH
Confidence 8776 999998876544444433
No 52
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.45 E-value=3e-12 Score=127.60 Aligned_cols=186 Identities=16% Similarity=0.152 Sum_probs=126.9
Q ss_pred HHhhhhHHHHHHHHHHHhhhhHHHHHhcHHHHHHH-hCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHH
Q 017795 131 QALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVA 207 (366)
Q Consensus 131 ~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~-~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~ 207 (366)
..++++.+|.+.+..++.....+....++|.+.++ .|++...+ ..+++.+.+.++++++|+++||+++++.. ..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~---~~ 322 (438)
T TIGR00712 246 YVLPNKLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRG---AT 322 (438)
T ss_pred HHccCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCccc---HH
Confidence 35678889988777666666666777899999876 58887655 66778888999999999999999765432 11
Q ss_pred HHHHHHHHHHHHHHHHh---cchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHH
Q 017795 208 MAVAQVVMAFALLYYAI---GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIA 284 (366)
Q Consensus 208 ~~~~~~~~~~~~~l~~~---~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~ 284 (366)
.........++.+++.. .+....++..++.|++..+........+.|.+|++.+|+++|+.+....+|+.+++|.+.
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~ 402 (438)
T TIGR00712 323 GVFFMTLVTIAVIVYWMNPAGNPLVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIV 402 (438)
T ss_pred HHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhH
Confidence 11111111222222221 122223333444555433333333446789999999999999999888887643499999
Q ss_pred HHHhhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHHhhcH
Q 017795 285 SGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHRTK 351 (366)
Q Consensus 285 G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~~r 351 (366)
|.+.|..+ |.++|++++++++++.+..+++.++.|
T Consensus 403 G~l~~~~g--------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (438)
T TIGR00712 403 GYTVDFFG--------------------------------WDGGFMVMIGGSILAVILLIVVMIGEK 437 (438)
T ss_pred HHHHHhcc--------------------------------chHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 99999877 999999999888888888777666543
No 53
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.45 E-value=1.8e-12 Score=130.88 Aligned_cols=184 Identities=14% Similarity=0.193 Sum_probs=123.9
Q ss_pred HHHHhhhhHHHHHHHHHHHhhhhHHHHHhcHHHHHH-HhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCc-h
Q 017795 129 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQ-SLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYP-R 204 (366)
Q Consensus 129 ~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~-~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~-R 204 (366)
+++.++++++|.+++.+++.......+.+++|.+.. ++|++...+ +.+++.+++.+|++++|+++||++||...+ |
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r 324 (476)
T PLN00028 245 LRYGVTNYRTWILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGR 324 (476)
T ss_pred HHHHHcCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchh
Confidence 456678888998888777666666667778888765 469987665 788888999999999999999999876432 4
Q ss_pred hHHHHHHHHHHHHHHHHHHhc-chhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhH
Q 017795 205 PVAMAVAQVVMAFALLYYAIG-WPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVI 283 (366)
Q Consensus 205 ~~~~~~~~~~~~~~~~l~~~~-~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i 283 (366)
.....+.+++.+++.+++... +.....+..++.+++.+...+..+++++++ +++++|+++|+.+.++.+|+.+ +|
T Consensus 325 ~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~g~lg~~i-~~-- 400 (476)
T PLN00028 325 LWALWIVQTLGGVFCIWLGRANSLGAAIVVMILFSIFVQAACGATFGIVPFV-SRRSLGVISGLTGAGGNVGAVL-TQ-- 400 (476)
T ss_pred HHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHhhhhhcccCccc-ChhhchhhhhhhhccccHHHHH-HH--
Confidence 444444555444444443322 223334445555665555455555556665 4678999999987766666664 44
Q ss_pred HHHHhhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHH
Q 017795 284 ASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVV 347 (366)
Q Consensus 284 ~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~ 347 (366)
++++..+. .+|+.+|++.+++.++++++.+++.
T Consensus 401 --~l~~~~~~-----------------------------~~y~~~f~~~~~~~~i~~~~~~~~~ 433 (476)
T PLN00028 401 --LLFFTGSS-----------------------------YSTETGISLMGVMIIACTLPVAFIH 433 (476)
T ss_pred --HHHHhcCC-----------------------------ccHhhHHHHHHHHHHHHHHHHHhee
Confidence 44443220 1399999999988888877776654
No 54
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.45 E-value=2.8e-12 Score=128.69 Aligned_cols=153 Identities=10% Similarity=0.104 Sum_probs=118.3
Q ss_pred HHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHh-cchhHH
Q 017795 154 TVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAI-GWPGEI 230 (366)
Q Consensus 154 ~~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~-~~~~~l 230 (366)
.+...+|++.+++|.+.++. ..+.+.++..++.+++|+++||++||+.+ ..+.++.+++.++++. .+...+
T Consensus 37 ~~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l------~~~~~~~~~~~~~~~~~~~~~~l 110 (455)
T TIGR00892 37 AVTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVV------IAGGLLASLGMILASFSSNVIEL 110 (455)
T ss_pred chhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHH------HhhHHHHHHHHHHHHHhhhHHHH
Confidence 34567888999999987765 67777778888999999999999998654 5556666666666543 334444
Q ss_pred HH-HHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhhhhhhhhhhhccCCCCCc
Q 017795 231 YV-TTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPV 309 (366)
Q Consensus 231 ~~-~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~~~~~~~~~~~~~~~~~~ 309 (366)
++ ..++.|++.+..+....+++.+.|+ ++|+.+.++.+.+..+|..+ +|.+.|.+.+..+
T Consensus 111 ~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~-~~~l~~~l~~~~g----------------- 171 (455)
T TIGR00892 111 YLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLST-LAPLNQYLFESFG----------------- 171 (455)
T ss_pred HHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHH-HHHHHHHHHHHhC-----------------
Confidence 44 3467788887766666678889995 78999999999999999996 8999999998777
Q ss_pred ccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHH
Q 017795 310 SFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIV 346 (366)
Q Consensus 310 ~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~ 346 (366)
||++|++.+++++++.+..+++
T Consensus 172 ---------------wr~~f~~~~~~~~~~~v~~~~~ 193 (455)
T TIGR00892 172 ---------------WRGSFLILGGLLLHCCVCGALM 193 (455)
T ss_pred ---------------hHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999998887765554433
No 55
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.45 E-value=1.3e-12 Score=129.40 Aligned_cols=154 Identities=12% Similarity=0.089 Sum_probs=107.5
Q ss_pred hhhhHHHHHHHHHHHhhhhHHHHHhcHHHHHHHh--CCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHH
Q 017795 133 LMKADFLLLFFSLVLASGSGLTVIDNLGQICQSL--GYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAM 208 (366)
Q Consensus 133 l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~--g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~ 208 (366)
++++.+|...+.+++.......+..++|.+.+++ |++...+ ..++..++..+|++++|+++||+++|+.. .
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~-----~ 313 (412)
T TIGR02332 239 IFTPAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHH-----T 313 (412)
T ss_pred hcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHH-----H
Confidence 3457789888888888777778889999999885 5554443 67888899999999999999999875321 1
Q ss_pred HHHHHHHHHHHHHHH-hcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHH
Q 017795 209 AVAQVVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGI 287 (366)
Q Consensus 209 ~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l 287 (366)
....++.+++..+.. ..+....+.+..+.++|.....+..+....|.+|++++++++|+.+....+|+.+ +|.+.|.+
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~-~p~~~g~i 392 (412)
T TIGR02332 314 ALPYLFAAAGWLLASATDHNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSAL-SPFLIGIL 392 (412)
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhh-hhhhcccc
Confidence 223333333332222 2222222222333344443333444555577899999999999999999999996 99999999
Q ss_pred hhhhh
Q 017795 288 YDYYA 292 (366)
Q Consensus 288 ~d~~~ 292 (366)
.|..+
T Consensus 393 ~~~~g 397 (412)
T TIGR02332 393 KDATG 397 (412)
T ss_pred cccCC
Confidence 99876
No 56
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.45 E-value=5.2e-12 Score=127.34 Aligned_cols=149 Identities=12% Similarity=0.176 Sum_probs=121.4
Q ss_pred HHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHH
Q 017795 137 DFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVV 214 (366)
Q Consensus 137 ~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~ 214 (366)
.+..+++.+++...........+|.+.+++|.+..+. ..+.+.++..++.++.|+++||+|||+.. ..+.++
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~------~~~~~~ 94 (496)
T PRK03893 21 AFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAM------VISIVL 94 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH------HHHHHH
Confidence 4455566666655666666677889999999988765 78888889999999999999999997654 556666
Q ss_pred HHHHHHHHH-hcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhh
Q 017795 215 MAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYA 292 (366)
Q Consensus 215 ~~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~ 292 (366)
.+++.++.. ..+...+++..++.|++.+..++....++.|.++.++++.+.++...+..+|..+ +|.+.+.+.+..+
T Consensus 95 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~-~~~~~~~l~~~~~ 172 (496)
T PRK03893 95 FSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVV-AAQVYSLVVPVWG 172 (496)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhccCC
Confidence 666666555 3455677888999999999888989999999999999999999999999999996 9999999988766
No 57
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.44 E-value=3.1e-12 Score=123.38 Aligned_cols=146 Identities=14% Similarity=0.184 Sum_probs=115.7
Q ss_pred HHHHHHHHHHHhhhhHHHHHhcHHH-HHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHH
Q 017795 137 DFLLLFFSLVLASGSGLTVIDNLGQ-ICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQV 213 (366)
Q Consensus 137 ~~~ll~~~~~~~~~~~~~~~~~l~~-i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~ 213 (366)
.+|..++++++.......+...+|+ +.+++|++.... ..+...++..++.+++|+++||+|||+.. .++.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~------~~~~~ 75 (366)
T TIGR00886 2 NLFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTT------TLSLL 75 (366)
T ss_pred chHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHH------HHHHH
Confidence 4677888888888888888888996 778899998776 77888999999999999999999998655 56666
Q ss_pred HHHHHHHHHH-hc-chhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhh
Q 017795 214 VMAFALLYYA-IG-WPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDY 290 (366)
Q Consensus 214 ~~~~~~~l~~-~~-~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~ 290 (366)
+++++.+++. .. +...+++..++.|++.+ .+....++++|.+++++++.+.++......+|..+ ++.+++.+...
T Consensus 76 ~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~-~~~i~~~l~~~ 152 (366)
T TIGR00886 76 LLAIPCLWAGLAVQSYSVLLLLRLFIGIAGG-SFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGV-AQFVMPPIIGS 152 (366)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhch-hhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHH-HHHHHHHHHHH
Confidence 7777666655 34 55667788888998855 45666778999999999999999988777777775 67776666543
No 58
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.44 E-value=5.7e-13 Score=128.11 Aligned_cols=165 Identities=13% Similarity=0.176 Sum_probs=130.4
Q ss_pred HHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHH
Q 017795 145 LVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYY 222 (366)
Q Consensus 145 ~~~~~~~~~~~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~ 222 (366)
+++.......+...+|.+.+++|++..+. ..++..++..++.+++|+++||+|||+.. ..+.++.+++.+++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~------~~~~~~~~~~~~~~ 77 (379)
T TIGR00881 4 YAAYYLVRKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFL------PIGLILCAIVNLFF 77 (379)
T ss_pred hhHHHHhHHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehh------HHHHHHHHHHHHHH
Confidence 34444455556677888899999988765 78888999999999999999999998765 66666666666665
Q ss_pred H-hcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhh-hHHHHHhhhhhhhhhhhhh
Q 017795 223 A-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSG-VIASGIYDYYAEKQAGLLW 300 (366)
Q Consensus 223 ~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp-~i~G~l~d~~~~~~~~~~~ 300 (366)
. ..+...+++..++.|++.+...+...++++|.++.++++.+.++.+....+|..+ +| .+.+.+.+..+
T Consensus 78 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~-------- 148 (379)
T TIGR00881 78 GFSTSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGL-LPPLVLFGIAELYS-------- 148 (379)
T ss_pred HHhhhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHH-HHHHHHHHHHhcCC--------
Confidence 5 4455677788899999999888999999999999999999999999999999996 88 45566555444
Q ss_pred hccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHHh
Q 017795 301 KYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVH 348 (366)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~ 348 (366)
|++.|++.++++++..++.+++.+
T Consensus 149 ------------------------~~~~~~~~~~~~~~~~~~~~~~~~ 172 (379)
T TIGR00881 149 ------------------------WHWVFIVPGIIAIIVSLICFLLLR 172 (379)
T ss_pred ------------------------chhHHHHHHHHHHHHHHHHheeeC
Confidence 999999888777776655555443
No 59
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.44 E-value=2.2e-12 Score=127.76 Aligned_cols=177 Identities=13% Similarity=0.078 Sum_probs=122.6
Q ss_pred hHHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHH
Q 017795 136 ADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQV 213 (366)
Q Consensus 136 ~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~ 213 (366)
+.++..++.++...........+.|.+.+++|++.... ......++.+++++++|+++||++||+.. ..+.+
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~------~~~~~ 357 (481)
T TIGR00879 284 RLFLGVVLQWFQQFTGINAIMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLL------LIGAA 357 (481)
T ss_pred HHHHHHHHHHHHHHhCCeehHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHH------HHHHH
Confidence 33444444444433334445667888888999987544 66777888899999999999999987644 44445
Q ss_pred HHHHHHHHHH---h--cc------hhHHHHHHHHHHHHhhh-hhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhh
Q 017795 214 VMAFALLYYA---I--GW------PGEIYVTTVLVGLSYGA-HWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSG 281 (366)
Q Consensus 214 ~~~~~~~l~~---~--~~------~~~l~~~~~l~G~~~g~-~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp 281 (366)
+++++.+++. . .. .........+++.+.+. ..+....+++|.+|++.++++.++.+....+|+++ +|
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i-~~ 436 (481)
T TIGR00879 358 GMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFI-VG 436 (481)
T ss_pred HHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHH-HH
Confidence 5555444433 1 11 12222233333333332 23556667799999999999999999999999996 89
Q ss_pred hHHHHHhhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHHhhcH
Q 017795 282 VIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHRTK 351 (366)
Q Consensus 282 ~i~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~~r 351 (366)
.+.|.+.+..+ |++.|++.++++++++++.+++.++++
T Consensus 437 ~~~~~~~~~~~--------------------------------~~~~f~~~~~~~~~~~i~~~~~~~~~~ 474 (481)
T TIGR00879 437 FLFPTMLESIG--------------------------------VGGVFIFFGGLNVLGLIFVYFFLPETK 474 (481)
T ss_pred HHHHHHHHhcC--------------------------------ccceehhHHHHHHHHHHHHheecccCC
Confidence 99999998876 888999999888888877766655544
No 60
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.44 E-value=6.2e-12 Score=124.00 Aligned_cols=169 Identities=17% Similarity=0.215 Sum_probs=129.1
Q ss_pred HHHHHHHHHhhhhHHHHHhcHHHH-HHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHH
Q 017795 139 LLLFFSLVLASGSGLTVIDNLGQI-CQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVM 215 (366)
Q Consensus 139 ~ll~~~~~~~~~~~~~~~~~l~~i-~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~ 215 (366)
+.+++..++.......+...++.+ .+++|++.... ..+...+...+.++++|+++||++||+.. ..+.++.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l------~~~~~~~ 86 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMI------VTGMLMR 86 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHH------HHHHHHH
Confidence 444455555555555555556654 57789988766 66677788888899999999999987655 6666666
Q ss_pred HHHHHHHH-hcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhhhh
Q 017795 216 AFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEK 294 (366)
Q Consensus 216 ~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~~~ 294 (366)
+++.+++. ..+...+++..++.|++.+...+...+++.|.+++++++.++++......+|..+ ||.++|++. ..+
T Consensus 87 ~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~i-g~~l~g~l~-~~g-- 162 (400)
T PRK11646 87 AAGFATMAIAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVI-GALLGSWLL-QYD-- 162 (400)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH-Hhh--
Confidence 66666655 3455667788888899888777778888999999999999999999999999996 999999998 455
Q ss_pred hhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHH
Q 017795 295 QAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVV 347 (366)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~ 347 (366)
|++.|++.+.++++++++..+..
T Consensus 163 ------------------------------~~~~f~~~~~~~~~~~i~~~~~~ 185 (400)
T PRK11646 163 ------------------------------FRLVCATGAVLFVLAAAFNAWLL 185 (400)
T ss_pred ------------------------------HHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999998877776655544443
No 61
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.44 E-value=2.1e-12 Score=127.84 Aligned_cols=182 Identities=15% Similarity=0.136 Sum_probs=127.7
Q ss_pred HHHHhhhhHHHHHHHHHHHhhhhHHHHHhcHHHHHHHh----CCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccC
Q 017795 129 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSL----GYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAY 202 (366)
Q Consensus 129 ~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~----g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~ 202 (366)
.++.++++.+|.+.+..++.......+..++|.+..+. +.+.... ..++..+...++.+.+|+++||+++|+..
T Consensus 216 ~~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~ 295 (420)
T PRK09528 216 ALALLKLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNAL 295 (420)
T ss_pred HHHHccCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhh
Confidence 44567888877655544333333333444566655442 3433332 56667778889999999999999997654
Q ss_pred chhHHHHHHHHHHHHHHHHHH-hcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHH-HHhHhhhhHHHhh
Q 017795 203 PRPVAMAVAQVVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNF-LTLASPAGSLIFS 280 (366)
Q Consensus 203 ~R~~~~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~-~~~~~~~G~~i~g 280 (366)
..+.++.+++.+++. ..++..+++..++.|++.+.........+.+.++.+.+++.++. .++...+|..+ +
T Consensus 296 ------~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~i-g 368 (420)
T PRK09528 296 ------LLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVF-L 368 (420)
T ss_pred ------HHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHH-H
Confidence 455555555555554 44556666777788888777666667788999999999988776 56778899996 9
Q ss_pred hhHHHHHhhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHHhh
Q 017795 281 GVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHR 349 (366)
Q Consensus 281 p~i~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~ 349 (366)
|.+.|++.|..| |+.+|++.+++.+++.++.+...++
T Consensus 369 ~~~~G~l~~~~G--------------------------------~~~~f~~~~~~~~i~~~~~~~~~~~ 405 (420)
T PRK09528 369 STLAGNLYDSIG--------------------------------FQGTYLILGGIVLLFTLISVFTLSG 405 (420)
T ss_pred HHHHHHHHHhhC--------------------------------chHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999887 9999999888877766655544433
No 62
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.44 E-value=3.7e-12 Score=128.96 Aligned_cols=149 Identities=18% Similarity=0.264 Sum_probs=119.0
Q ss_pred HHHHHHHHHHHhhhhHHHHHhcHHHHH-HHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhh-hhhhccCchhHHHHHHH
Q 017795 137 DFLLLFFSLVLASGSGLTVIDNLGQIC-QSLGYADTSI--YVSMISIWNFLGRVGGGYFSEA-IVRKFAYPRPVAMAVAQ 212 (366)
Q Consensus 137 ~~~ll~~~~~~~~~~~~~~~~~l~~i~-~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~-~grr~~~~R~~~~~~~~ 212 (366)
.+|.+++..++.-.+.+.....++.+. +++|++.+.+ ..+.+.....+..+++|+++|| +|||+.+ ..+.
T Consensus 15 ~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~------~~g~ 88 (489)
T PRK10207 15 PFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTI------VLGA 88 (489)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHH------HHHH
Confidence 467777777676677776766676665 5689887765 6677777788888899999999 9998876 7777
Q ss_pred HHHHHHHHHHHhc-c-hhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCC--chhhHHHHHHhHhhhhHHHhhhhHHHHHh
Q 017795 213 VVMAFALLYYAIG-W-PGEIYVTTVLVGLSYGAHWAIVPAAASELFGLK--SFGALYNFLTLASPAGSLIFSGVIASGIY 288 (366)
Q Consensus 213 ~~~~~~~~l~~~~-~-~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~--~~g~~~g~~~~~~~~G~~i~gp~i~G~l~ 288 (366)
+++.++++++... + ...++++.++.|+|.|...+...++++|.|+++ +++.++++.+++.++|+.+ ||.++|++.
T Consensus 89 ~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~-g~~l~g~l~ 167 (489)
T PRK10207 89 IVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLI-SLSLAPVIA 167 (489)
T ss_pred HHHHHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHH-HHHHHHHHH
Confidence 8888887776633 2 234557888899999998888999999999877 4588999999999999996 999999998
Q ss_pred hhhh
Q 017795 289 DYYA 292 (366)
Q Consensus 289 d~~~ 292 (366)
+..+
T Consensus 168 ~~~g 171 (489)
T PRK10207 168 DKFG 171 (489)
T ss_pred HhhC
Confidence 8776
No 63
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.44 E-value=7.8e-12 Score=126.15 Aligned_cols=173 Identities=13% Similarity=0.111 Sum_probs=119.8
Q ss_pred HHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHH
Q 017795 143 FSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALL 220 (366)
Q Consensus 143 ~~~~~~~~~~~~~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~ 220 (366)
+.+++...........+|.+.+++|++..+. ..+.+.++..++.+++|+++||+|||+.. ..+.++.+++.+
T Consensus 43 ~~~~~~~~~~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~------~~~~~~~~~~~~ 116 (476)
T PLN00028 43 ISFFTCFVSTFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGS------AFLLMLTAPAVF 116 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHH------HHHHHHHHHHHH
Confidence 3344444444455566788999999987765 56667778888999999999999997654 455556666655
Q ss_pred HHH-hcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhhhhhhhhh
Q 017795 221 YYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLL 299 (366)
Q Consensus 221 l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~~~~~~~~ 299 (366)
+.+ ..+...+++++++.|++.+.. .....+++|.|+.++||.+.|+.+....+|+.+ ++.+.+.+.+.....
T Consensus 117 ~~~~~~s~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~-~~~~~~~i~~~~~~~----- 189 (476)
T PLN00028 117 CMSLVSSATGFIAVRFFIGFSLATF-VSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGV-TQLLMPLVFPLIKDA----- 189 (476)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHhh-HHHHHHHHHhcChhheeHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhc-----
Confidence 554 345566777888889887764 334557899999999999999998877777775 666666554422100
Q ss_pred hhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHH
Q 017795 300 WKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIV 346 (366)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~ 346 (366)
.+.+..+||++|++.++++++.+++.+++
T Consensus 190 ------------------~~~~~~gWr~~f~i~g~l~l~~~l~~~~~ 218 (476)
T PLN00028 190 ------------------GAPSFTAWRIAFFVPGLLHIIMGILVLTL 218 (476)
T ss_pred ------------------CCcchhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 00011139999999998887766655544
No 64
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.44 E-value=8.5e-12 Score=121.87 Aligned_cols=173 Identities=14% Similarity=0.137 Sum_probs=123.7
Q ss_pred CCHHHHhhhhHHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCch
Q 017795 127 FTLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPR 204 (366)
Q Consensus 127 ~~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R 204 (366)
.+.++.++++.+|......+........+..++|.+.++.|++.... ..++..++..++++..|+++||+++|+..
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l-- 268 (381)
T PRK03633 191 TSIWPMLKLRQARLGVNGCIISGIVLGSLYGLMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVL-- 268 (381)
T ss_pred CCHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHH--
Confidence 34667788888876544333333333344567888888889887654 67788888999999999999999987543
Q ss_pred hHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHH
Q 017795 205 PVAMAVAQVVMAFALLYYAIGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIA 284 (366)
Q Consensus 205 ~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~ 284 (366)
..+..+++++.+.+. . ....+...++.|++.+...+...+.+.|..++++++...+..+....+|+.+ ||.++
T Consensus 269 ----~~~~~~~~~~~~~~~-~-~~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~i-gp~~~ 341 (381)
T PRK03633 269 ----RVQVFVVILGSIAML-S-QAAMAPALFILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLL-GPSFT 341 (381)
T ss_pred ----HHHHHHHHHHHHHHh-h-hHHHHHHHHHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHH-HHHHH
Confidence 444444444443332 1 2233345566677666667777777888888888888888888889999996 99999
Q ss_pred HHHhhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHH
Q 017795 285 SGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAM 340 (366)
Q Consensus 285 G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~ 340 (366)
|++.|..+ |++.|++.+.+.+++.
T Consensus 342 G~l~~~~g--------------------------------~~~~f~~~~~~~l~~~ 365 (381)
T PRK03633 342 AMLMQNYS--------------------------------DNLLFIMIASVSFIYL 365 (381)
T ss_pred HHHHHHhC--------------------------------ccHHHHHHHHHHHHHH
Confidence 99999887 8889988777665543
No 65
>PRK09952 shikimate transporter; Provisional
Probab=99.44 E-value=1.2e-11 Score=123.37 Aligned_cols=178 Identities=12% Similarity=0.110 Sum_probs=119.4
Q ss_pred HhhhhHHHHHHH-HHHHhhhhHHHHHhcHHHHHH-HhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHH
Q 017795 132 ALMKADFLLLFF-SLVLASGSGLTVIDNLGQICQ-SLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVA 207 (366)
Q Consensus 132 ~l~~~~~~ll~~-~~~~~~~~~~~~~~~l~~i~~-~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~ 207 (366)
.+++++.|...+ ..++.....+....++|.+.+ .+|++.... ...+..+..+++.+++|+++||++||+..
T Consensus 245 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~----- 319 (438)
T PRK09952 245 LLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVY----- 319 (438)
T ss_pred HHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHH-----
Confidence 556777776543 344444455566677887764 578876543 34455667788899999999999987543
Q ss_pred HHHHHHHHHHHHHHH--H--hcchh-HHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhH-hhhhHHHhhh
Q 017795 208 MAVAQVVMAFALLYY--A--IGWPG-EIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLA-SPAGSLIFSG 281 (366)
Q Consensus 208 ~~~~~~~~~~~~~l~--~--~~~~~-~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~-~~~G~~i~gp 281 (366)
..+.++.+++.+.+ . ..+.. .+++..++.+++.+...+..+++++|.||.+.|+++.++.+.. ..+|+.+ +|
T Consensus 320 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~-~p 397 (438)
T PRK09952 320 -ITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGF-TP 397 (438)
T ss_pred -HHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHH-HH
Confidence 23333333322211 1 11222 2334455567787777888899999999999999999986554 4578885 89
Q ss_pred hHHHHHhhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHH
Q 017795 282 VIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIV 346 (366)
Q Consensus 282 ~i~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~ 346 (366)
.+.|++.|..+. +|...+.+.+++.+++++..+.+
T Consensus 398 ~i~g~l~~~~~~------------------------------~~~~~~~~~~~~~~i~~v~~~~~ 432 (438)
T PRK09952 398 FIAAALVTYFGG------------------------------SWHSVAIYLLAGCLISAMTALLM 432 (438)
T ss_pred HHHHHHHHhcCC------------------------------CchHHHHHHHHHHHHHHHHHHHc
Confidence 999999986540 38888888887777776665543
No 66
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.44 E-value=3.7e-12 Score=134.03 Aligned_cols=137 Identities=12% Similarity=0.131 Sum_probs=106.1
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHh-cchhHHHHHHHHHHHHhhhhhhhHHHHHH
Q 017795 175 VSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAI-GWPGEIYVTTVLVGLSYGAHWAIVPAAAS 253 (366)
Q Consensus 175 ~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~-~~~~~l~~~~~l~G~~~g~~~~~~~~~~s 253 (366)
..+..++.++|.++.|+++||+|||+.+ .+++++.+++.+++.. .+...+++..++.|++.++.++...++++
T Consensus 601 ~~l~~l~~i~G~il~g~L~Dr~GRr~~l------~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~a 674 (742)
T TIGR01299 601 NFLGTLAVLPGNIVSALLMDKIGRLRML------AGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTV 674 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHH------HHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455678889999999999999998655 6666666666655553 33445556666778888888899999999
Q ss_pred HhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHH
Q 017795 254 ELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMA 333 (366)
Q Consensus 254 e~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~ 333 (366)
|+||++.|++++|+.++...+|+++ ||+++|.+.+. . ....|++.+
T Consensus 675 El~Pt~~Rgta~Gi~~~~~rlGaii-gp~i~g~L~~~-~--------------------------------~~~pf~i~a 720 (742)
T TIGR01299 675 ELYPSDKRATAFGFLNALCKAAAVL-GILIFGSFVGI-T--------------------------------KAAPILFAS 720 (742)
T ss_pred HHcCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHh-h--------------------------------hHHHHHHHH
Confidence 9999999999999999999999996 99999988764 2 456777777
Q ss_pred HHHHHHHHHHHHHHhhcHH
Q 017795 334 GLCIIAMVMSLIVVHRTKS 352 (366)
Q Consensus 334 ~~~~~~~~~~~~~~~~~r~ 352 (366)
++.++++++.+++ +++|+
T Consensus 721 ~~lll~~ll~~~L-PET~~ 738 (742)
T TIGR01299 721 AALACGGLLALKL-PDTRG 738 (742)
T ss_pred HHHHHHHHHHHhC-CCCcc
Confidence 7777766665544 56654
No 67
>PRK11043 putative transporter; Provisional
Probab=99.43 E-value=6.1e-12 Score=123.47 Aligned_cols=161 Identities=10% Similarity=0.106 Sum_probs=127.0
Q ss_pred HhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH-
Q 017795 147 LASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA- 223 (366)
Q Consensus 147 ~~~~~~~~~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~- 223 (366)
++......+...+|++.+++|.+..+. ..+++.++..++.+++|+++||+|||+.. ..+.++..++.++..
T Consensus 17 ~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~------~~~~~~~~~~~~~~~~ 90 (401)
T PRK11043 17 LGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVL------LAGLSLFALGSLGMLW 90 (401)
T ss_pred HHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHH------HHHHHHHHHHHHHHHH
Confidence 334444456667788889999988776 78888899999999999999999998654 555555555555544
Q ss_pred hcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhhhhhhhhhhhcc
Q 017795 224 IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYN 303 (366)
Q Consensus 224 ~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~~~~~~~~~~~~ 303 (366)
..+...+++..++.|++.+...+...+.+.|.++.++++...+..+....+|..+ +|.++|++.+..+
T Consensus 91 ~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~i~~~l~~~~g----------- 158 (401)
T PRK11043 91 VESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPAL-APLLGAWLLNHFG----------- 158 (401)
T ss_pred hcCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhcCC-----------
Confidence 3455667778888899888777777788999999998999999988888899996 9999999998776
Q ss_pred CCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHH
Q 017795 304 GNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIV 346 (366)
Q Consensus 304 ~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~ 346 (366)
|++.|++.+++.++..++.+.+
T Consensus 159 ---------------------~~~~~~~~~~~~~~~~~~~~~~ 180 (401)
T PRK11043 159 ---------------------WQAIFATLFAITLLLILPTLRL 180 (401)
T ss_pred ---------------------hHHHHHHHHHHHHHHHHHHHHc
Confidence 9999999888777766555444
No 68
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.43 E-value=1.2e-11 Score=121.76 Aligned_cols=181 Identities=14% Similarity=0.115 Sum_probs=129.8
Q ss_pred HHHHhhhhHHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhH
Q 017795 129 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPV 206 (366)
Q Consensus 129 ~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~ 206 (366)
++..++++.+|...+..++..........++|.+.+++|++..+. ..++..+++.++++..|+++||++||+.. + .
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~-~-~ 292 (402)
T TIGR00897 215 ATILFTNPNVLLGGMVRIINTIGLFGFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTV-R-W 292 (402)
T ss_pred HHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHH-H-H
Confidence 345678899998887777776666777889999999999987765 56777889999999999999999986543 0 0
Q ss_pred HHHHHHHHHHHHHHHHHh---cchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhH
Q 017795 207 AMAVAQVVMAFALLYYAI---GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVI 283 (366)
Q Consensus 207 ~~~~~~~~~~~~~~l~~~---~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i 283 (366)
.......+..+....... .+....+++.++.|++.++..+ ....+++.. ++++|+++|+.+....+|+.+ +|.+
T Consensus 293 ~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~-~~~~g~~~g~~~~~~~lg~~~-gp~i 369 (402)
T TIGR00897 293 FGGVGCGIFTLALYYIPQHFGHSFAVALIIAIALGIFLAGYVP-LAAVFPTLA-PKHKGAAMSVLNLSAGLSAFL-APAI 369 (402)
T ss_pred HHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHH-HHHHHHhhC-cchhHHHHHHHHHHHHHHHHH-HHHH
Confidence 111111121112111111 2233455667778887776544 345566754 568999999999999999996 9999
Q ss_pred HHHHhhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHH
Q 017795 284 ASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIV 346 (366)
Q Consensus 284 ~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~ 346 (366)
+|.++|..+ |..+|++.+++.+++.++..++
T Consensus 370 ~g~l~~~~g--------------------------------~~~~~~~~a~~~~i~~~~~~~~ 400 (402)
T TIGR00897 370 AVLFIGFFG--------------------------------AIGVVWIFAALYVVSAFLTAFI 400 (402)
T ss_pred HHHHHhhcc--------------------------------hHHHHHHHHHHHHHHHHHHHHh
Confidence 999999887 8889999988887777665543
No 69
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.43 E-value=8.9e-12 Score=121.90 Aligned_cols=157 Identities=10% Similarity=-0.018 Sum_probs=124.7
Q ss_pred CHHHHhhhhHHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchh
Q 017795 128 TLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRP 205 (366)
Q Consensus 128 ~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~ 205 (366)
+.++.+|++++|.+.+..++.......+..+.|.+.+++|++...+ ..++..+...++.+++|++.||++.|+..
T Consensus 197 ~~~~~l~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l--- 273 (382)
T TIGR00902 197 AFIALLKNPMNLRFLAAVCLIQGAHAAYYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLL--- 273 (382)
T ss_pred hHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHH---
Confidence 4678889999999888877777777777888999999999988765 55556666777777788888888766543
Q ss_pred HHHHHHHHHHHHHHHHHH-hcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHH-hHhhhhHHHhhhhH
Q 017795 206 VAMAVAQVVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLT-LASPAGSLIFSGVI 283 (366)
Q Consensus 206 ~~~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~-~~~~~G~~i~gp~i 283 (366)
.++.+...+...+++ ..+...++...++.|+++|..++....++.+. +.+++++..++.+ +...+|..+ ||.+
T Consensus 274 ---~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~-g~~~ 348 (382)
T TIGR00902 274 ---LISAIACVGRWAIIGAIEAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAI-FTAF 348 (382)
T ss_pred ---HHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHH-HHHH
Confidence 667777777766666 44556677788899999999888888888887 8888999999976 467788986 9999
Q ss_pred HHHHhhhhh
Q 017795 284 ASGIYDYYA 292 (366)
Q Consensus 284 ~G~l~d~~~ 292 (366)
+|+++|..+
T Consensus 349 ~G~l~~~~g 357 (382)
T TIGR00902 349 AGFIYPTLG 357 (382)
T ss_pred HHHHHHhcc
Confidence 999999887
No 70
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.43 E-value=2.7e-11 Score=122.57 Aligned_cols=158 Identities=11% Similarity=0.064 Sum_probs=104.6
Q ss_pred CHHHHhhh-hHHHHHH-HHHHHhhhhHHHHHhcHHHHHH-HhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccC
Q 017795 128 TLPQALMK-ADFLLLF-FSLVLASGSGLTVIDNLGQICQ-SLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAY 202 (366)
Q Consensus 128 ~~~~~l~~-~~~~ll~-~~~~~~~~~~~~~~~~l~~i~~-~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~ 202 (366)
++++.+++ ++.+++. ...++.....+.+..++|.+.+ .+|++.... ..+...++..++.+++|+++||+|||+.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~ 319 (490)
T PRK10642 240 SFKEIATKHWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFV 319 (490)
T ss_pred CHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH
Confidence 56666653 2333322 2223334455566778999885 578876544 55666778889999999999999997643
Q ss_pred chhHHHHHHHHH-HHHHH--HHHH-hcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHH
Q 017795 203 PRPVAMAVAQVV-MAFAL--LYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLI 278 (366)
Q Consensus 203 ~R~~~~~~~~~~-~~~~~--~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i 278 (366)
..+.++ ...+. +... ..+...++++.++.|++.+...+..+.+++|+||++.||+++++.+....+++.+
T Consensus 320 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~ 393 (490)
T PRK10642 320 ------ILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGL 393 (490)
T ss_pred ------HHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHH
Confidence 232222 11111 1122 2233455666777787777777778888899999999999999865556666674
Q ss_pred hhhhHHHHHhhhhh
Q 017795 279 FSGVIASGIYDYYA 292 (366)
Q Consensus 279 ~gp~i~G~l~d~~~ 292 (366)
+|.+.|++.+..+
T Consensus 394 -~p~i~g~l~~~~~ 406 (490)
T PRK10642 394 -TPTLAAWLVESTQ 406 (490)
T ss_pred -HHHHHHHHHHHhC
Confidence 8999999988654
No 71
>PRK03545 putative arabinose transporter; Provisional
Probab=99.43 E-value=1.1e-11 Score=121.25 Aligned_cols=179 Identities=13% Similarity=0.135 Sum_probs=127.6
Q ss_pred CHHHHhhhhHHHHHHHHHHHhhhhHHHHHhcHHHHHHH-hCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCch
Q 017795 128 TLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPR 204 (366)
Q Consensus 128 ~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~-~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R 204 (366)
+.++.++++.+|..++..++..........+++++.++ .|++.... ..++..++..+++++.|+++||++||..
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~--- 273 (390)
T PRK03545 197 SLPLLFRRPALVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFL--- 273 (390)
T ss_pred HHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHH---
Confidence 45678888888876655555444444445566666655 68876654 6777888999999999999999976532
Q ss_pred hHHHHHHHHHHHHHHHHH-H-hcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhh
Q 017795 205 PVAMAVAQVVMAFALLYY-A-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGV 282 (366)
Q Consensus 205 ~~~~~~~~~~~~~~~~l~-~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~ 282 (366)
..+..+..++..++ . ..+...++++.++.|++.+.........+.+..+ +.++.++++.+....+|..+ ||.
T Consensus 274 ----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~-G~~ 347 (390)
T PRK03545 274 ----LIAIALLLVCLLLLLPAANSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGA-GAL 347 (390)
T ss_pred ----HHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHH-HHH
Confidence 22223333333222 2 3334456667778888877665666667777765 68899999999999999996 999
Q ss_pred HHHHHhhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHH
Q 017795 283 IASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVV 347 (366)
Q Consensus 283 i~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~ 347 (366)
++|.++|..+ ++.+|++.+.+.+++++......
T Consensus 348 ~~G~~~~~~g--------------------------------~~~~~~~~~~~~~~~~~~~~~~~ 380 (390)
T PRK03545 348 LGNQVSLHLG--------------------------------LSSIGYVGAALALAALVWSILIF 380 (390)
T ss_pred HHHHHHhccC--------------------------------hhHHHHHHHHHHHHHHHHHHHHc
Confidence 9999999987 99999999988877776655443
No 72
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.43 E-value=3.5e-12 Score=130.25 Aligned_cols=176 Identities=17% Similarity=0.100 Sum_probs=130.6
Q ss_pred hhhHHHHHHHHHHHhhh----hHHHHHhcHHHHHHHhCCChhHH-HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHH
Q 017795 134 MKADFLLLFFSLVLASG----SGLTVIDNLGQICQSLGYADTSI-YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAM 208 (366)
Q Consensus 134 ~~~~~~ll~~~~~~~~~----~~~~~~~~l~~i~~~~g~~~~~~-~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~ 208 (366)
++++++..+.++.+... ........++++.+++|-++... +.+...+...++.++.|.+||.+|||+..
T Consensus 38 ~s~~~i~~~~~~~~~~~~~~~~~~~~a~~l~~I~~diG~~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~------ 111 (599)
T PF06609_consen 38 RSPRFIASFAAFSLAVIAAYFVLVLPASILPYINADIGGSDNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFF------ 111 (599)
T ss_pred eCHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHhcCCCccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHH------
Confidence 45566655544333332 22233455788999999776655 77778888999999999999999998765
Q ss_pred HHHHHHHHHHHHHHH-hcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHH
Q 017795 209 AVAQVVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGI 287 (366)
Q Consensus 209 ~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l 287 (366)
.++.++..+|.++.+ ..+...+..+..+.|+|.|... +....++|+.+.|.|+..+++......+...+ ||.++..+
T Consensus 112 i~g~~l~vvG~Iv~atA~~~~~~iag~~l~GvgaG~~~-~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~-~~~ia~~~ 189 (599)
T PF06609_consen 112 IIGSLLGVVGSIVCATAQNMNTFIAGMVLYGVGAGVQE-LAALAISELVPNKWRGLGLAIASIPFIITTWI-SPLIAQLF 189 (599)
T ss_pred HHHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHhhHHHH-HHHHHHHHhcccchhhhHhHHHHHHHHhhhcc-cHHHHHHh
Confidence 888999999998877 4566778888999999987765 45666899999999988887776654444443 66666655
Q ss_pred hhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHHhh
Q 017795 288 YDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHR 349 (366)
Q Consensus 288 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~ 349 (366)
.... +|||.|++.+++..+++++..+++++
T Consensus 190 ~~~~--------------------------------~WRw~~~~~~i~~~i~~vl~~~fY~P 219 (599)
T PF06609_consen 190 AAHS--------------------------------GWRWIFYIFIIWSGIALVLIFFFYFP 219 (599)
T ss_pred ccCC--------------------------------CcchHHHHHHHHHHHHHHHHHHHhCC
Confidence 4433 39999999999988888877777654
No 73
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.42 E-value=5.1e-12 Score=124.30 Aligned_cols=147 Identities=14% Similarity=0.101 Sum_probs=116.6
Q ss_pred hhHHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHH
Q 017795 135 KADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQ 212 (366)
Q Consensus 135 ~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~ 212 (366)
+++||.++++.++.......+...++.+.++++.+.... ..+.+.+...++.+++|+++||++||+.+ ..+.
T Consensus 2 ~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl------~~~~ 75 (393)
T PRK11195 2 SKGFYAIMAAQFFSALADNALLFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVM------FIAN 75 (393)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhh------HHHH
Confidence 346788888887777655556666777788888876554 67788889999999999999999998876 5555
Q ss_pred HHHHHHHHHHHhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhh
Q 017795 213 VVMAFALLYYAIGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDY 290 (366)
Q Consensus 213 ~~~~~~~~l~~~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~ 290 (366)
++.+++.+++..... .++.+++.|++.+...+...++++|++++++++.+.++..+...+|..+ ||.++|.+.+.
T Consensus 76 ~~~~~~~~~~~~~~~--~~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~-Gp~lgG~l~~~ 150 (393)
T PRK11195 76 GIKLLGCLLMLFGIH--PLLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILL-GTVLGGALADP 150 (393)
T ss_pred HHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 555554444332211 2667788999999999999999999999999999999999999999996 99999999884
No 74
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.42 E-value=1.1e-11 Score=124.17 Aligned_cols=156 Identities=13% Similarity=0.163 Sum_probs=115.6
Q ss_pred HHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHh-----cch
Q 017795 155 VIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAI-----GWP 227 (366)
Q Consensus 155 ~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~-----~~~ 227 (366)
+...+|.+.++ |++..+. ..+...++..++.+++|+++||+|||+.+ ..+.++.+++.++++. .+.
T Consensus 48 ~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l------~~~~~~~~i~~~~~~~~~~~~~~~ 120 (452)
T PRK11273 48 FALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFL------PAGLILAAAVMLFMGFVPWATSSI 120 (452)
T ss_pred HHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhH------HHHHHHHHHHHHHHHhhhcccccH
Confidence 44567777766 9887766 77888899999999999999999998755 5566666655555442 133
Q ss_pred hHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhhhhhhhhhhhccCCCC
Q 017795 228 GEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNML 307 (366)
Q Consensus 228 ~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~~~~~~~~~~~~~~~~ 307 (366)
..+++..++.|++.+..++.....+.+.+++++++.+.++.+.+..+|+.+.+|.+...+....+
T Consensus 121 ~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~g--------------- 185 (452)
T PRK11273 121 AVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFND--------------- 185 (452)
T ss_pred HHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcc---------------
Confidence 45667778889988887777777889999999999999999999999876445554333332223
Q ss_pred CcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHHhh
Q 017795 308 PVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHR 349 (366)
Q Consensus 308 ~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~ 349 (366)
|++.|++.++++++..++.+++.++
T Consensus 186 -----------------w~~~f~i~~~~~~~~~~l~~~~~~~ 210 (452)
T PRK11273 186 -----------------WHAALYMPAFAAILVALFAFAMMRD 210 (452)
T ss_pred -----------------HHHHHHHHHHHHHHHHHHHHHHccC
Confidence 9999999988777766666555544
No 75
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.42 E-value=8e-12 Score=122.81 Aligned_cols=130 Identities=14% Similarity=0.143 Sum_probs=112.2
Q ss_pred HHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH-hcchhHH
Q 017795 154 TVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IGWPGEI 230 (366)
Q Consensus 154 ~~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~-~~~~~~l 230 (366)
.....+|.+.+++|.+..+. ..+.+.++..++.+..|+++||+|||+.+ ..+..+.+++.++.+ ..+...+
T Consensus 27 ~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l------~~~~~l~~~~~~~~~~a~~~~~l 100 (393)
T PRK09705 27 SVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSV------AISLLLIAVGALMRELYPQSALL 100 (393)
T ss_pred ccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHH------HHHHHHHHHHHHHHHHCcchHHH
Confidence 34567899999999988776 88888899999999999999999998876 788888888888776 4566678
Q ss_pred HHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhh
Q 017795 231 YVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYY 291 (366)
Q Consensus 231 ~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~ 291 (366)
++++++.|++.+...+....++.+.|+ ++++.+.++...+..+|..+ |+.+++++.+..
T Consensus 101 l~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~-g~~~~~~l~~~~ 159 (393)
T PRK09705 101 LSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGL-GAAITPWLVQHS 159 (393)
T ss_pred HHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHH-HHHHHHHHHHhc
Confidence 889999999999988888889999996 78999999999998899996 899999888765
No 76
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.42 E-value=5.6e-12 Score=124.58 Aligned_cols=174 Identities=16% Similarity=0.089 Sum_probs=130.4
Q ss_pred HhhhhHHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHH
Q 017795 132 ALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMA 209 (366)
Q Consensus 132 ~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~ 209 (366)
..++++++.++...++...........+|.+.++++.+..+. ..+...+...++.++.|+++||++||+.. .
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l------~ 86 (417)
T PRK10489 13 LKTHPAFRAVFIARFISIFGLGLLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLI------L 86 (417)
T ss_pred HHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEE------E
Confidence 335666776666666665555566677888888888877655 78888888999999999999999998876 3
Q ss_pred HHHHHHHHHHHHHH------hcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhH
Q 017795 210 VAQVVMAFALLYYA------IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVI 283 (366)
Q Consensus 210 ~~~~~~~~~~~l~~------~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i 283 (366)
.+.++.+++.+.+. ..+...+++..++.|++.+...+...+.+++.+++++++++.++.++...+|..+ ||.+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-g~~l 165 (417)
T PRK10489 87 LARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVI-SPAL 165 (417)
T ss_pred ehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHh-HHHH
Confidence 34443343333221 1233456677788888877777777788999999999999999999999999996 9999
Q ss_pred HHHHhhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHH
Q 017795 284 ASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSL 344 (366)
Q Consensus 284 ~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~ 344 (366)
+|.+.+..+ |++.|++.++..+++.++.+
T Consensus 166 ~g~l~~~~~--------------------------------~~~~~~~~~~~~~~~~~~~~ 194 (417)
T PRK10489 166 GGLLIAAGG--------------------------------VAWNYGLAAAGTFITLLPLL 194 (417)
T ss_pred HHHHHHHHh--------------------------------hHHHHHHHHHHHHHHHHHHH
Confidence 999998776 99999887776666554433
No 77
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.42 E-value=3.5e-12 Score=128.20 Aligned_cols=168 Identities=13% Similarity=0.053 Sum_probs=124.3
Q ss_pred HHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHH
Q 017795 143 FSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALL 220 (366)
Q Consensus 143 ~~~~~~~~~~~~~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~ 220 (366)
+.+++.+..-..+...+|.+.+++|.+..+. ..+.+.++..++.+++|+++||+|+|+.+ .++.++.+++.+
T Consensus 36 ~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l------~~~~~~~~~~~~ 109 (467)
T PRK09556 36 IGYLTMYLIRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFL------PFLLILSAICML 109 (467)
T ss_pred HHHHHHHHHhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchH------HHHHHHHHHHHH
Confidence 3333333334445566889999999988776 78888889999999999999999998765 444444333333
Q ss_pred HHH------hcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhhhh
Q 017795 221 YYA------IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEK 294 (366)
Q Consensus 221 l~~------~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~~~ 294 (366)
+++ ..+...+++.+++.|++.+..++....++++.|+++++|.+.|+...+.++|..+ ++.+..++.+....
T Consensus 110 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l-~~~i~~~~~~~~~~- 187 (467)
T PRK09556 110 GFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAG-AGGVALWGANYFFD- 187 (467)
T ss_pred HHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhH-HHHHHHHHHHhhcc-
Confidence 322 2455677888999999998888888899999999999999999999999999996 88887776654310
Q ss_pred hhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHH
Q 017795 295 QAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIV 346 (366)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~ 346 (366)
.+|+..|.+.+++.++.+++.+++
T Consensus 188 ----------------------------~~~~~~f~~~g~~~~~~~i~~~~~ 211 (467)
T PRK09556 188 ----------------------------GHVIGMFIFPSIIALIIGFIGLRY 211 (467)
T ss_pred ----------------------------CcchhHHHHHHHHHHHHHHHHHHh
Confidence 028888888777766655555444
No 78
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.41 E-value=3e-12 Score=123.59 Aligned_cols=177 Identities=15% Similarity=0.130 Sum_probs=146.5
Q ss_pred hhhHHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHH
Q 017795 134 MKADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVA 211 (366)
Q Consensus 134 ~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~ 211 (366)
+...|..+++.+.+.+..--.+....|.+.++.|++.++. ..+.+++...++..+.|.+|||.+.|+-+ .++
T Consensus 27 r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm------~~g 100 (448)
T COG2271 27 RIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFM------AFG 100 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceee------hHH
Confidence 3334555666666666666677788999999999999887 89999999999999999999999887765 888
Q ss_pred HHHHHHHHHHHHhc-chhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHH--HHHh
Q 017795 212 QVVMAFALLYYAIG-WPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIA--SGIY 288 (366)
Q Consensus 212 ~~~~~~~~~l~~~~-~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~--G~l~ 288 (366)
+++.++..+++.+. +...+.+..++-|+.-|.-|+....++...|+.++||+..++.+++-++|+.+ -|++. |++.
T Consensus 101 Lilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal-~~~~~~la~~~ 179 (448)
T COG2271 101 LILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGAL-APLVALLAFFA 179 (448)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccch-HHHHHHHHHHH
Confidence 88888888888744 44456677778899999889999999999999999999999999999999997 68888 8887
Q ss_pred hhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHHhh
Q 017795 289 DYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHR 349 (366)
Q Consensus 289 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~ 349 (366)
++.+ |+.+|++-++++++..++.+...+.
T Consensus 180 ~~~~--------------------------------w~~~f~~pgiiaiival~~~~~~rd 208 (448)
T COG2271 180 FHGG--------------------------------WRAAFYFPGIIAIIVALILLFLLRD 208 (448)
T ss_pred hccc--------------------------------hhHHHHHHHHHHHHHHHHHHHHhCC
Confidence 7665 9999999998888766666655543
No 79
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.41 E-value=4.7e-12 Score=126.85 Aligned_cols=192 Identities=12% Similarity=0.086 Sum_probs=143.4
Q ss_pred CCCCHHHHhhhhHHHHHHHHHHHhhhhHHHHHhcHHHHHHH-hCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhcc
Q 017795 125 EDFTLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFA 201 (366)
Q Consensus 125 ~~~~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~-~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~ 201 (366)
.+.++++.++++.+|.++++.++.......+..++|.++++ +|++-.+. +.+++.+...+..+++|.++||+-+| .
T Consensus 247 ~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~-~ 325 (466)
T KOG2532|consen 247 PPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFR-I 325 (466)
T ss_pred CCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc-c
Confidence 46689999999999999999999999999999999999976 78876655 88899999999999999999999776 3
Q ss_pred C----chhHHHHHHHHHHHHHHHHHHhcc--hhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhh
Q 017795 202 Y----PRPVAMAVAQVVMAFALLYYAIGW--PGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAG 275 (366)
Q Consensus 202 ~----~R~~~~~~~~~~~~~~~~l~~~~~--~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G 275 (366)
+ .|+.+-.+++...++.++.++... ...+.+..+.++.+..+..............+++.+..+|+.+....+.
T Consensus 326 ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~Gf~~~~~~~apq~a~~l~g~~~~~~~~~ 405 (466)
T KOG2532|consen 326 LSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNISGFYKNHQDIAPQHAGFVMGIINFVGALA 405 (466)
T ss_pred CchHhHHHHHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHcccchhhhHhhhhhccchHHHHHHHHHHHHHHHH
Confidence 3 377788888888888777766322 2212222222223332222222222222227889999999999999999
Q ss_pred HHHhhhhHHHHHhhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHH
Q 017795 276 SLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVV 347 (366)
Q Consensus 276 ~~i~gp~i~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~ 347 (366)
+++ +|.+.|.+..... +. .|+.+|++.+++.+++.+...++.
T Consensus 406 ~~~-~P~~vg~~~~~~t-~~----------------------------eW~~VF~i~a~i~~~~~i~f~~f~ 447 (466)
T KOG2532|consen 406 GFI-APLLVGIIVTDNT-RE----------------------------EWRIVFLIAAGILIVGNIIFLFFG 447 (466)
T ss_pred HHH-HHHheeeEeCCCC-HH----------------------------HHHHHHHHHHHHHHHhchheeEee
Confidence 996 9999999984211 11 299999999999998886665554
No 80
>PRK12382 putative transporter; Provisional
Probab=99.40 E-value=1.1e-11 Score=121.44 Aligned_cols=152 Identities=13% Similarity=0.071 Sum_probs=114.5
Q ss_pred hhhHHHHHHHHHHHhhhhHHHHHhcHHHH-HHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHH
Q 017795 134 MKADFLLLFFSLVLASGSGLTVIDNLGQI-CQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAV 210 (366)
Q Consensus 134 ~~~~~~ll~~~~~~~~~~~~~~~~~l~~i-~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~ 210 (366)
.+..++.++++.++...........+|.+ .+++|.+.... ..+...+...++++.+|+++||+|||+.+ ..
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l------~~ 86 (392)
T PRK12382 13 ANFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSA------LQ 86 (392)
T ss_pred ccccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHH------HH
Confidence 44456666666666655555566677765 56899988776 88899999999999999999999998755 44
Q ss_pred HHHHHHHHHH---HHH------hcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhh
Q 017795 211 AQVVMAFALL---YYA------IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSG 281 (366)
Q Consensus 211 ~~~~~~~~~~---l~~------~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp 281 (366)
+.+...++.+ +.. ..+...+++++++.|++.+...+...+++.|.+++++|+.+.++...+..+|..+ ||
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~-g~ 165 (392)
T PRK12382 87 GMLACGLAGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAA-GA 165 (392)
T ss_pred HHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHH-HH
Confidence 3333333222 111 1233467788899999988877777788899999999999999999988888886 99
Q ss_pred hHHHHHhhhhh
Q 017795 282 VIASGIYDYYA 292 (366)
Q Consensus 282 ~i~G~l~d~~~ 292 (366)
.+++++.+..+
T Consensus 166 ~~~~~l~~~~g 176 (392)
T PRK12382 166 PLGLLLHSHFG 176 (392)
T ss_pred HHHHHHHhccC
Confidence 99999988766
No 81
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.39 E-value=2.2e-11 Score=118.95 Aligned_cols=176 Identities=16% Similarity=0.103 Sum_probs=125.6
Q ss_pred HHHHhhhhHHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH-HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHH
Q 017795 129 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI-YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVA 207 (366)
Q Consensus 129 ~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~~~~~~-~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~ 207 (366)
+++.++++.+|.+.+.+++.....+.+.+|+|++.++.|++.... ..++..+ .|.+..++++||..||.. |...
T Consensus 185 ~~~ll~~~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~~g~s~~~~~~~~l~~~---~g~~g~~~~~d~~~r~~~--r~~~ 259 (368)
T TIGR00903 185 FGALAGRKDLWIIGAILGFGVALFDNLAIWLEAALRPAGLEDIAGDAVALAIL---AGLIGVAVIPDRVARAGL--RSIY 259 (368)
T ss_pred HHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHH---HHHHHHHHhhHHhhhhhh--HHHH
Confidence 567889999999999999998888899999999999888876422 4444444 344556899999977532 2222
Q ss_pred HHHHHHHHHHHHHHHHh-cchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHH
Q 017795 208 MAVAQVVMAFALLYYAI-GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASG 286 (366)
Q Consensus 208 ~~~~~~~~~~~~~l~~~-~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~ 286 (366)
.....++++++..++.. .++....+...+.+++....++..+++.+|.+|++.||++.|+.+..+.+|+.+ +|.+.|.
T Consensus 260 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~-~~~~~~~ 338 (368)
T TIGR00903 260 IRAAALLIAAFFLALAFELNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVA-LALAAML 338 (368)
T ss_pred HHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHH-HHHHHHH
Confidence 23233333444333332 223333445555667677777778889999999999999999999999999986 8988887
Q ss_pred HhhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHH
Q 017795 287 IYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSL 344 (366)
Q Consensus 287 l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~ 344 (366)
+.. + ....|.+.++.++++++..+
T Consensus 339 ~~~--~--------------------------------~~~~f~~~~~~~~i~~~~~~ 362 (368)
T TIGR00903 339 FIS--S--------------------------------AEAYFTFLAILITIAFAIAL 362 (368)
T ss_pred Hhc--C--------------------------------HHHHHHHHHHHHHHHHHHHH
Confidence 773 3 66678888877777666643
No 82
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.39 E-value=1e-11 Score=122.98 Aligned_cols=126 Identities=21% Similarity=0.265 Sum_probs=98.9
Q ss_pred HHHHHhcHHHHHHHhCCC--------hhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHH
Q 017795 152 GLTVIDNLGQICQSLGYA--------DTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLY 221 (366)
Q Consensus 152 ~~~~~~~l~~i~~~~g~~--------~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l 221 (366)
...+...++.+..+++++ .... ..+++.++..++.+++|+++||+|||+.+ .++.++..++.++
T Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~------~~~~~~~~~~~~~ 117 (481)
T TIGR00879 44 TGVIGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSL------LIIALLFVIGAIL 117 (481)
T ss_pred cchhhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHH------HHHHHHHHHHHHH
Confidence 334555667777776665 4443 78888999999999999999999997655 5555555555555
Q ss_pred HH-hcc---hhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHH
Q 017795 222 YA-IGW---PGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIA 284 (366)
Q Consensus 222 ~~-~~~---~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~ 284 (366)
.. ..+ ...+++++++.|++.+..++...++++|.+++++|+.+.++.+....+|..+ +|.+.
T Consensus 118 ~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~-~~~~~ 183 (481)
T TIGR00879 118 MGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILV-AYGFG 183 (481)
T ss_pred HHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHH-HHHHH
Confidence 43 222 2367889999999999999999999999999999999999999999999996 88887
No 83
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.39 E-value=2.5e-11 Score=117.35 Aligned_cols=176 Identities=17% Similarity=0.133 Sum_probs=123.1
Q ss_pred HHHHhhhhHHHHHHHHHHHhhhhHHHHHhcHHHHH-HHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchh
Q 017795 129 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQIC-QSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRP 205 (366)
Q Consensus 129 ~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~-~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~ 205 (366)
.++.+++++++.++...++.......+..++|.+. +++|.+.... ..+...+....++++.|+++||++||+..
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~--- 268 (375)
T TIGR00899 192 VRGLLASRDTRLLFVACTLMWGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLM--- 268 (375)
T ss_pred hhhhhcCcchHHHHHHHHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHH---
Confidence 44466777777666555554444444555677765 5678877655 44455556677889999999999987543
Q ss_pred HHHHHHHHHHHHHHHHHH-hcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHH
Q 017795 206 VAMAVAQVVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIA 284 (366)
Q Consensus 206 ~~~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~ 284 (366)
....++..+....+. ..+...+++..++.|++.|...+.....+.|.++. +++++.++.+....+|..+ +|.++
T Consensus 269 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~-g~~~~ 343 (375)
T TIGR00899 269 ---LLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGILAGIGMLYFQDLMPG-RAGAATTLYTNTGRVGWII-AGSVG 343 (375)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc-hhhHHHHHHHHHHHHHHHH-HHHHH
Confidence 333333333333332 23344455566777888887777777888898865 5679999999999999996 99999
Q ss_pred HHHhhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHH
Q 017795 285 SGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSL 344 (366)
Q Consensus 285 G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~ 344 (366)
|.+.|..+ |+..|++.+++++++.++..
T Consensus 344 g~~~~~~g--------------------------------~~~~~~~~~~~~~~~~~~~~ 371 (375)
T TIGR00899 344 GILAERWS--------------------------------YHAVYWFAIVMLIVALFCLL 371 (375)
T ss_pred HHHHHhcc--------------------------------chhHHHHHHHHHHHHHHHHh
Confidence 99999876 99999988888777766553
No 84
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.39 E-value=1.7e-11 Score=118.46 Aligned_cols=160 Identities=17% Similarity=0.103 Sum_probs=112.4
Q ss_pred CCHHHHhhhhH--HHHHHHHHHHhhhhHHHHHhcHHHHH-HHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhcc
Q 017795 127 FTLPQALMKAD--FLLLFFSLVLASGSGLTVIDNLGQIC-QSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFA 201 (366)
Q Consensus 127 ~~~~~~l~~~~--~~ll~~~~~~~~~~~~~~~~~l~~i~-~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~ 201 (366)
.++++.++++. ++...+..++..........++|.+. +++|++.... ..++..++..++++++|+++||++||+.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~ 287 (394)
T TIGR00883 208 GPIRETLTKHRKPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPV 287 (394)
T ss_pred CCHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHH
Confidence 35667777665 66666666665555566667888888 5578876654 6677788899999999999999998754
Q ss_pred CchhHHHHHHHHHHHHHHH-HH-Hh--cchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHH-HhHhhhhH
Q 017795 202 YPRPVAMAVAQVVMAFALL-YY-AI--GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFL-TLASPAGS 276 (366)
Q Consensus 202 ~~R~~~~~~~~~~~~~~~~-l~-~~--~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~-~~~~~~G~ 276 (366)
. .....+....+.. +. .. .+....+...++.|++.+..++...+.++|.+|.+.+++++++. +....+|+
T Consensus 288 ~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~ 362 (394)
T TIGR00883 288 L-----IIFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFG 362 (394)
T ss_pred H-----HHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHh
Confidence 3 1122222222211 11 11 23334455667778888888888999999999999999999984 45566788
Q ss_pred HHhhhhHHHHHhhhhh
Q 017795 277 LIFSGVIASGIYDYYA 292 (366)
Q Consensus 277 ~i~gp~i~G~l~d~~~ 292 (366)
.+ +|.++|++.|..+
T Consensus 363 ~~-~p~~~g~l~~~~g 377 (394)
T TIGR00883 363 GF-APYIAAALVAMTG 377 (394)
T ss_pred hH-HHHHHHHHHHHcC
Confidence 75 9999999999876
No 85
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.38 E-value=2.1e-11 Score=117.16 Aligned_cols=160 Identities=14% Similarity=0.177 Sum_probs=114.0
Q ss_pred HHHHhhhhHHHHHHHHHHHhhhhHHHHHhcHHHHHH-HhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchh
Q 017795 129 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQ-SLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRP 205 (366)
Q Consensus 129 ~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~-~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~ 205 (366)
.++.++++.+|.+.+..++.......+..++|.+.+ .+|++.... ..++..++..+++++.|+++||..+++..
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~--- 285 (379)
T TIGR00881 209 LQYVLLNKVLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRG--- 285 (379)
T ss_pred HHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcch---
Confidence 456678888998888777777766777778888875 478887655 67778888999999999999987544322
Q ss_pred HHHHHHHHHHHHHHHHHHh---cchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhh
Q 017795 206 VAMAVAQVVMAFALLYYAI---GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGV 282 (366)
Q Consensus 206 ~~~~~~~~~~~~~~~l~~~---~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~ 282 (366)
...........++...+.. .+.....+..++.|++.++........+.|.+|++.+|++.|+.+....+|+.+ +|.
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~-~~~ 364 (379)
T TIGR00881 286 PLAVFFMALIIVSLLVYWLNPAANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGIL-AGL 364 (379)
T ss_pred HHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhh-hhh
Confidence 1111222222222222221 122334455566676665656666778899999999999999999999999996 999
Q ss_pred HHHHHhhhhh
Q 017795 283 IASGIYDYYA 292 (366)
Q Consensus 283 i~G~l~d~~~ 292 (366)
+.|.+.|..+
T Consensus 365 ~~g~l~~~~g 374 (379)
T TIGR00881 365 PLGYLADGFG 374 (379)
T ss_pred hHHHHHHhhc
Confidence 9999999877
No 86
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.38 E-value=1e-11 Score=121.64 Aligned_cols=178 Identities=14% Similarity=0.160 Sum_probs=124.4
Q ss_pred HHHhhhhHHHHHHHH-HHHhhhhHHHHHhcHHHHHHHhCCChhH------HHHHHHHHHHhhhhhhhhhhhhhhhhhccC
Q 017795 130 PQALMKADFLLLFFS-LVLASGSGLTVIDNLGQICQSLGYADTS------IYVSMISIWNFLGRVGGGYFSEAIVRKFAY 202 (366)
Q Consensus 130 ~~~l~~~~~~ll~~~-~~~~~~~~~~~~~~l~~i~~~~g~~~~~------~~~sl~~i~~~~g~~~~G~lsD~~grr~~~ 202 (366)
.+.+++++++...+. .++.......+..+++.+..+.+.+... ...++..++..++++.+|+++||++||+..
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~ 291 (408)
T PRK09874 212 VTSLKNPKLVLSLFVTTLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKIL 291 (408)
T ss_pred HHhCcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhH
Confidence 345566666543322 2222222233445566666665433221 134556677888999999999999987654
Q ss_pred chhHHHHHHHHHHHHHHHHHH-hcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhh
Q 017795 203 PRPVAMAVAQVVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSG 281 (366)
Q Consensus 203 ~R~~~~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp 281 (366)
..+.++.+++.+.+. ..+...+++..++.|++.+...+...+.+.+..+.+++|..+++.+....+|..+ ||
T Consensus 292 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~-gp 364 (408)
T PRK09874 292 ------ITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVT-GP 364 (408)
T ss_pred ------HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHh-hH
Confidence 444444444444433 3344556677778899998888888888888888899999999999999999996 99
Q ss_pred hHHHHHhhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHH
Q 017795 282 VIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIV 346 (366)
Q Consensus 282 ~i~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~ 346 (366)
.++|.+.|..+ |++.|++.+++.+++++.....
T Consensus 365 ~~~G~l~~~~g--------------------------------~~~~f~~~~~~~l~~~~~~~~~ 397 (408)
T PRK09874 365 LMGAAISANYG--------------------------------FRAVFLVTAGVVLFNAVYSWNS 397 (408)
T ss_pred HHHHHHHhhcc--------------------------------hhHHHHHHHHHHHHHHHHHHHH
Confidence 99999998877 9999999998888877666543
No 87
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.38 E-value=5.9e-11 Score=118.10 Aligned_cols=180 Identities=12% Similarity=0.014 Sum_probs=112.9
Q ss_pred CHHHHhhhhHHHHHHHHHHHh-hhhHHHHHhcHHHHHH-HhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCc
Q 017795 128 TLPQALMKADFLLLFFSLVLA-SGSGLTVIDNLGQICQ-SLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYP 203 (366)
Q Consensus 128 ~~~~~l~~~~~~ll~~~~~~~-~~~~~~~~~~l~~i~~-~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~ 203 (366)
++++.++++++|.+.+..++. ....+.+..|+|++.+ .+|++..+. ..++..+...+++++.|+++||++||+..
T Consensus 234 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~- 312 (432)
T PRK10406 234 SLKGLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSM- 312 (432)
T ss_pred cHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHH-
Confidence 577888888888776665543 4555667788999875 478887554 56666777788899999999999987533
Q ss_pred hhHHHHHHHHHHHHH---HHHHHh-c-chhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhh-hHH
Q 017795 204 RPVAMAVAQVVMAFA---LLYYAI-G-WPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPA-GSL 277 (366)
Q Consensus 204 R~~~~~~~~~~~~~~---~~l~~~-~-~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~-G~~ 277 (366)
.+..++.++. .+.... . +....+....+.+++.+...+..+.+++|.||++.|++++|+.+..+.+ ++.
T Consensus 313 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~ 387 (432)
T PRK10406 313 -----LCFGSLAALFTVPILSALQNVSSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGG 387 (432)
T ss_pred -----HHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHh
Confidence 2222211111 111111 1 1222222222222333344456677889999999999999999876664 344
Q ss_pred HhhhhHHHHHhhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHH
Q 017795 278 IFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIV 346 (366)
Q Consensus 278 i~gp~i~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~ 346 (366)
. .|.+.+.+ +.++ .|...+++.+++.+++.+..+++
T Consensus 388 ~-~p~~~~~l-~~~g-------------------------------~~~~~~~~~~~~~~i~~~~~~~l 423 (432)
T PRK10406 388 S-AEYVALSL-KSIG-------------------------------METAFFWYVTLMAVVAFLVSLML 423 (432)
T ss_pred H-HHHHHHHH-HHhC-------------------------------CCcHHHHHHHHHHHHHHHHHHHh
Confidence 3 68878854 5444 26666666666666665555543
No 88
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.37 E-value=2.4e-11 Score=119.14 Aligned_cols=149 Identities=13% Similarity=0.083 Sum_probs=112.5
Q ss_pred HHHHHHHHHHHhhhhHHHHHhcHHHH-HHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHH
Q 017795 137 DFLLLFFSLVLASGSGLTVIDNLGQI-CQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQV 213 (366)
Q Consensus 137 ~~~ll~~~~~~~~~~~~~~~~~l~~i-~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~ 213 (366)
++..+.+..+............+|.+ .+++|.+..+. ..+...++..++.+++|+++||+|||+.+ ..+.+
T Consensus 16 ~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l------~~~~~ 89 (399)
T PRK05122 16 RIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAV------VFGLC 89 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchH------HHHHH
Confidence 45555555555555555566677764 56789887765 78888999999999999999999998876 45544
Q ss_pred HHHHHHHHHH---hc------chhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHH
Q 017795 214 VMAFALLYYA---IG------WPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIA 284 (366)
Q Consensus 214 ~~~~~~~l~~---~~------~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~ 284 (366)
+.+++.+.+. .. +...+++.+++.|++.+...+....++.|.++.++|+.+.++...+..+|..+ ||.++
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~-g~~l~ 168 (399)
T PRK05122 90 GCALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAI-GAPLG 168 (399)
T ss_pred HHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHH-HHHHH
Confidence 4444322221 11 12356778899999998888888888899999999999999988888888885 99999
Q ss_pred HHHhhhhh
Q 017795 285 SGIYDYYA 292 (366)
Q Consensus 285 G~l~d~~~ 292 (366)
+.+.+..+
T Consensus 169 ~~l~~~~g 176 (399)
T PRK05122 169 VLLYHWGG 176 (399)
T ss_pred HHHHHccc
Confidence 99988776
No 89
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.37 E-value=2.4e-11 Score=121.29 Aligned_cols=187 Identities=13% Similarity=0.129 Sum_probs=130.9
Q ss_pred hhHHHHHHHHHHHhhhhHHHHHhcHHHHHH-HhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHH
Q 017795 135 KADFLLLFFSLVLASGSGLTVIDNLGQICQ-SLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVA 211 (366)
Q Consensus 135 ~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~-~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~ 211 (366)
++.+|+.+++++.+....+......+.+.+ ++|++.++. ..+++.+...++|+..|++.||+|.|+.. .++
T Consensus 33 ~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~------~~~ 106 (462)
T PRK15034 33 RRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWT------VFS 106 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHH------HHH
Confidence 346777777777777777777766777766 799998876 78888999999999999999999987655 555
Q ss_pred HHHHHHHHHHHHh------cchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHH
Q 017795 212 QVVMAFALLYYAI------GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIAS 285 (366)
Q Consensus 212 ~~~~~~~~~l~~~------~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G 285 (366)
.++.++..++.+. .+...+++..++.|++ |+.++.....+++.|+++++|++.|+....+++|..+ ++.+..
T Consensus 107 ~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l-~~~l~p 184 (462)
T PRK15034 107 TAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSV-MQLVAP 184 (462)
T ss_pred HHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHH-HHHHHH
Confidence 5555555555443 3556788899999998 7778888889999999999999999996666666653 333332
Q ss_pred H-----HhhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHHh
Q 017795 286 G-----IYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVH 348 (366)
Q Consensus 286 ~-----l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~ 348 (366)
. +++..+... ..... .+...|+.++++...+.++..++.+++..
T Consensus 185 ~~i~~~l~~~~G~~~----------------~~~~~---g~~~~~~~~~~~~~~~~iv~~i~~~~~~~ 233 (462)
T PRK15034 185 LVIFVPVFAFLGVNG----------------VPQAD---GSVMSLANAAWIWVPLLAIATIAAWSGMN 233 (462)
T ss_pred HHHHHHHHHHhcccc----------------ccccc---cchHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 2 333333100 00000 01224888888888878777766665533
No 90
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.36 E-value=2.4e-11 Score=119.74 Aligned_cols=149 Identities=11% Similarity=0.030 Sum_probs=110.0
Q ss_pred HHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHH
Q 017795 138 FLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVM 215 (366)
Q Consensus 138 ~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~ 215 (366)
++..+++.++..........+++.+.+++|.+..+. ..+.+.++..++.+++|+++||+|||+.. ..+.++.
T Consensus 15 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l------~~~~~~~ 88 (402)
T TIGR00897 15 LLWGYIGVVVFMTGDGLEQGWLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTM------MIGLLLW 88 (402)
T ss_pred hhHHHHHHHHHHHhhhhHHHhHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHH------HHHHHHH
Confidence 344444444444444445557788889999987766 78888999999999999999999998755 4555555
Q ss_pred HHHHHHH---Hh--cchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhh
Q 017795 216 AFALLYY---AI--GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDY 290 (366)
Q Consensus 216 ~~~~~l~---~~--~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~ 290 (366)
+++.+++ .. .+...+++..++.|++.+.......+.+.+.+++++++.+.|+.++...+|..++||.++|++.+.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~ 168 (402)
T TIGR00897 89 CVGHAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPA 168 (402)
T ss_pred HHHHHHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 5544332 22 244456677888888887766666677889999999999999999999999743489999999887
Q ss_pred hh
Q 017795 291 YA 292 (366)
Q Consensus 291 ~~ 292 (366)
.+
T Consensus 169 ~g 170 (402)
T TIGR00897 169 FG 170 (402)
T ss_pred cc
Confidence 66
No 91
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.36 E-value=3.1e-11 Score=114.51 Aligned_cols=170 Identities=22% Similarity=0.285 Sum_probs=137.3
Q ss_pred hHHHHHHHHHHHhhhhHHHHHhcHHHHHHHh-CCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhc-cCchhHHHHHH
Q 017795 136 ADFLLLFFSLVLASGSGLTVIDNLGQICQSL-GYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKF-AYPRPVAMAVA 211 (366)
Q Consensus 136 ~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~-g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~-~~~R~~~~~~~ 211 (366)
+.+|.+.+..++.......+..+.|.+.++. |++.... ..+...++..+++++.|+++||++||+ .. ..+
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~------~~~ 248 (352)
T cd06174 175 RLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLL------LIG 248 (352)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHH------HHH
Confidence 4566666666666666667777888888775 8877655 777888899999999999999999876 43 556
Q ss_pred HHHHHHHHHHHH-hcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhh
Q 017795 212 QVVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDY 290 (366)
Q Consensus 212 ~~~~~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~ 290 (366)
..+..++.+++. ..+....++..++.|++.+..++...+.+.|.++++++++.+++.+....+|..+ +|.+.|.++|.
T Consensus 249 ~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~i~g~l~~~ 327 (352)
T cd06174 249 LLLAALGLLLLALAPSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGAL-GPLLAGLLLDT 327 (352)
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcc
Confidence 666666666555 3345567788888999999999999999999999999999999999999999996 99999999986
Q ss_pred hhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHH
Q 017795 291 YAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSL 344 (366)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~ 344 (366)
.+ |+..|++.+++++++.+...
T Consensus 328 ~~--------------------------------~~~~~~~~~~~~~i~~i~~~ 349 (352)
T cd06174 328 GG--------------------------------YGGVFLILAALALLAALLLL 349 (352)
T ss_pred cC--------------------------------cchHHHHHHHHHHHHHHHhe
Confidence 66 99999999888877766543
No 92
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.36 E-value=3.1e-11 Score=119.22 Aligned_cols=183 Identities=11% Similarity=0.036 Sum_probs=129.0
Q ss_pred HHHhhhhHHHHHHHHHHHhhhhHHHHHhcHHHHHHH-hCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhH
Q 017795 130 PQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPV 206 (366)
Q Consensus 130 ~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~-~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~ 206 (366)
+..++++.++.+++..++... ...+..++|.+.++ +|++.... ..+...++..++.++.|+++||.++++.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~----- 291 (417)
T PRK10489 218 RFLLASPVVGGIALLGGLLTM-ASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLL----- 291 (417)
T ss_pred HHHHcChHHHHHHHHHHHHHH-HHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchH-----
Confidence 345566766655544433322 23456678888887 88887654 6677788888999999999987543322
Q ss_pred HHHHHHHHHHHHHHHHHh-cchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHH
Q 017795 207 AMAVAQVVMAFALLYYAI-GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIAS 285 (366)
Q Consensus 207 ~~~~~~~~~~~~~~l~~~-~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G 285 (366)
+..+.++.+++.+++.. .+.....++.++.|++.+...+...+++.+.+|.+.+|+++++.+....+|..+ ||.+.|
T Consensus 292 -l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~-g~~l~G 369 (417)
T PRK10489 292 -MLLSTLGSFLAVGLFGLMPMWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAI-GAALLG 369 (417)
T ss_pred -HHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhH-HHHHHH
Confidence 24445555555555543 333345566777888877766777788899999999999999999999999996 999999
Q ss_pred HHhhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHHhhcHH
Q 017795 286 GIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHRTKS 352 (366)
Q Consensus 286 ~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~~r~ 352 (366)
.+.|..+ ++..+++.+++.++..++.....+++|+
T Consensus 370 ~l~~~~g--------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (417)
T PRK10489 370 GLGAMMT--------------------------------PVASASASGFGLLIIGVLLLLVLGELRR 404 (417)
T ss_pred HHHHHhc--------------------------------hhhHHHHHHHHHHHHHHHHHHhcccccc
Confidence 9999877 7778887777666655555555555544
No 93
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.36 E-value=2.5e-11 Score=121.82 Aligned_cols=162 Identities=17% Similarity=0.144 Sum_probs=115.0
Q ss_pred HhcHHHHHHHh--------CCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHhc
Q 017795 156 IDNLGQICQSL--------GYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAIG 225 (366)
Q Consensus 156 ~~~l~~i~~~~--------g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~~ 225 (366)
....|.+.+.+ +.+.... ..+.+.++..++.+++|+++||+|||+.+ .++.++++++.+..+..
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~------~~~~~l~~i~~~~~~~~ 105 (479)
T PRK10077 32 SGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSL------KIAAVLFFISALGSAWP 105 (479)
T ss_pred hHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH------HHHHHHHHHHHHHHHhh
Confidence 33445565555 6665554 78899999999999999999999998765 55555555554443321
Q ss_pred ----------c---hhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhh
Q 017795 226 ----------W---PGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYA 292 (366)
Q Consensus 226 ----------~---~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~ 292 (366)
+ ...+++++++.|++.|+.++...++++|.+++++||.+.++...+..+|..+ ++.+++.+.....
T Consensus 106 ~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~-~~~~~~~~~~~~~ 184 (479)
T PRK10077 106 EFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLV-VYFVNYFIARSGD 184 (479)
T ss_pred ccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHH-HHHHHHHHhccCc
Confidence 1 2346788999999999999999999999999999999999999999999886 7766655543221
Q ss_pred hhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHHhh
Q 017795 293 EKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHR 349 (366)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~ 349 (366)
... .+...||+.|++.++..++..+.. ++.++
T Consensus 185 ~~~------------------------~~~~gWr~~f~~~~~~~~~~~~~~-~~l~~ 216 (479)
T PRK10077 185 ASW------------------------LNTDGWRYMFASEAIPALLFLMLL-YFVPE 216 (479)
T ss_pred ccc------------------------cccCChHHHHHHHHHHHHHHHHHH-HcCCC
Confidence 000 011139999998877776655443 34444
No 94
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.35 E-value=5.8e-11 Score=120.19 Aligned_cols=144 Identities=13% Similarity=0.028 Sum_probs=106.4
Q ss_pred HHHHHHHHHHhhhhHHHHHhcHHHHHHHhCC--ChhH--H----HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHH
Q 017795 138 FLLLFFSLVLASGSGLTVIDNLGQICQSLGY--ADTS--I----YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMA 209 (366)
Q Consensus 138 ~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~--~~~~--~----~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~ 209 (366)
++...++.++-......+....|.+.+++.. ++.. . ..++..++..+|.++.|+++||+|||+.+ .
T Consensus 18 ~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l------~ 91 (490)
T PRK10642 18 ITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKIL------A 91 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHH------H
Confidence 3444455555555555666677878787743 2221 1 13556677889999999999999998766 7
Q ss_pred HHHHHHHHHHHHHHh-cchh--------HHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhh
Q 017795 210 VAQVVMAFALLYYAI-GWPG--------EIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFS 280 (366)
Q Consensus 210 ~~~~~~~~~~~l~~~-~~~~--------~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~g 280 (366)
.+.++++++.++.+. .+.. .+++++++.|++.|+.++...++++|.+|+++||...++...+..+|..+ |
T Consensus 92 ~~~~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~l-g 170 (490)
T PRK10642 92 ITIVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVL-G 170 (490)
T ss_pred HHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHH-H
Confidence 777777777777663 3322 36788999999999999999999999999999999999988888788775 7
Q ss_pred hhHHHHHh
Q 017795 281 GVIASGIY 288 (366)
Q Consensus 281 p~i~G~l~ 288 (366)
+.+...+.
T Consensus 171 ~~~~~~~~ 178 (490)
T PRK10642 171 AGVVVLIS 178 (490)
T ss_pred HHHHHHHH
Confidence 66554443
No 95
>TIGR00898 2A0119 cation transport protein.
Probab=99.35 E-value=3.2e-11 Score=122.10 Aligned_cols=182 Identities=13% Similarity=0.096 Sum_probs=121.0
Q ss_pred CCHHHHhhhhHHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHHHHHHHHHHHhhhhhhhhhhhhhhhhhccCchhH
Q 017795 127 FTLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSIYVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPV 206 (366)
Q Consensus 127 ~~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~~~~~~~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~ 206 (366)
.++++.++++.++...+..++..+........++.....++.+.. ....+.++....+.++.++++||+|||+..
T Consensus 314 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~l~dr~grr~~~---- 388 (505)
T TIGR00898 314 YSFLDLFRTPNLRKTTLCLMMLWFTTAFSYYGLVLDLGNLGGNIY-LDLFISGLVELPAKLITLLLIDRLGRRYTM---- 388 (505)
T ss_pred CcHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHhccccccCCChH-HHHHHHHHHHHHHHHHHHHHHHHhCCHHHH----
Confidence 467888888888766555444333322222223333344454432 234455677788999999999999987654
Q ss_pred HHHHHHHHHHHHHHHHHh-cch--hHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhH
Q 017795 207 AMAVAQVVMAFALLYYAI-GWP--GEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVI 283 (366)
Q Consensus 207 ~~~~~~~~~~~~~~l~~~-~~~--~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i 283 (366)
.+..++.+++.+++.. .+. ....+..++.+++.++.++..+.+++|++|++.|+++.|+.++...+|+.+ +|.+
T Consensus 389 --~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i-~p~i 465 (505)
T TIGR00898 389 --AASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSII-SPFL 465 (505)
T ss_pred --HHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHH-HhHH
Confidence 5555555555554442 222 334445556667777778888899999999999999999999999999996 9999
Q ss_pred HHHHhhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHHhhcH
Q 017795 284 ASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHRTK 351 (366)
Q Consensus 284 ~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~~r 351 (366)
.+ + +..+ +...+++.+++++++.++.++ .+++|
T Consensus 466 ~~-~-~~~~--------------------------------~~~~~~~~~~~~~~~~~~~~~-lpet~ 498 (505)
T TIGR00898 466 VY-L-GEKW--------------------------------LFLPLVLFGGLALLAGILTLF-LPETK 498 (505)
T ss_pred HH-H-HHHH--------------------------------HhhHHHHHHHHHHHHHHHHHc-CcCCC
Confidence 88 3 3333 566777777777776665544 34544
No 96
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.35 E-value=7.7e-11 Score=116.73 Aligned_cols=157 Identities=15% Similarity=0.140 Sum_probs=110.0
Q ss_pred HHHHhhhhHHHHHHHHHHHhhhhHHHHHhcHHHHHHH-hCCChhHH-HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhH
Q 017795 129 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI-YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPV 206 (366)
Q Consensus 129 ~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~-~g~~~~~~-~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~ 206 (366)
+++.++++.++.+.+..++............+++.+. ++.+.... +.++..++..++.+++|+++||+|+|+..
T Consensus 215 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~---- 290 (437)
T TIGR00792 215 FKALFKNDQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLGDPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILF---- 290 (437)
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHHHHHcchhheeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH----
Confidence 4556678888877766666555444444444444443 33222222 56666788899999999999999987654
Q ss_pred HHHHHHHHHHHHHHHHHh--cchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhC-------CCchhhHHHHHHhHhhhhHH
Q 017795 207 AMAVAQVVMAFALLYYAI--GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFG-------LKSFGALYNFLTLASPAGSL 277 (366)
Q Consensus 207 ~~~~~~~~~~~~~~l~~~--~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~-------~~~~g~~~g~~~~~~~~G~~ 277 (366)
..+.++++++.+++.. .+...+++..++.|++.+..++..+++++|..+ .+..|..+++.+....+|..
T Consensus 291 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~ 368 (437)
T TIGR00792 291 --AGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQA 368 (437)
T ss_pred --HHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHH
Confidence 4555555555544432 233445566677888888888888888888754 56689999999999999999
Q ss_pred HhhhhHHHHHhhhhh
Q 017795 278 IFSGVIASGIYDYYA 292 (366)
Q Consensus 278 i~gp~i~G~l~d~~~ 292 (366)
+ ++.+.|++.|..|
T Consensus 369 l-g~~i~g~ll~~~G 382 (437)
T TIGR00792 369 L-AGFLVGLILGIIG 382 (437)
T ss_pred H-HHHHHHHHHHHcC
Confidence 6 9999999998765
No 97
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.35 E-value=4.4e-11 Score=118.18 Aligned_cols=158 Identities=13% Similarity=0.147 Sum_probs=108.1
Q ss_pred CHHHHhhhhHHHHHHHHH---HHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccC
Q 017795 128 TLPQALMKADFLLLFFSL---VLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAY 202 (366)
Q Consensus 128 ~~~~~l~~~~~~ll~~~~---~~~~~~~~~~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~ 202 (366)
++++.++++.++.....+ ++..+....+..++|.+.++.|++.... ..++..++..++++++|+++||++||+..
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~ 299 (426)
T PRK12307 220 SMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTF 299 (426)
T ss_pred HHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH
Confidence 456777888776543322 2222333345678899998889877654 66778888999999999999999987543
Q ss_pred chhHHHHHHHHHHHHHHHHHH-hcchhHHHHHHHHHHHHh--hhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHh
Q 017795 203 PRPVAMAVAQVVMAFALLYYA-IGWPGEIYVTTVLVGLSY--GAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIF 279 (366)
Q Consensus 203 ~R~~~~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~G~~~--g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~ 279 (366)
..+.++.++..+++. ........+..+++|++. .+..++.+..+.|.+|.+.+|++.|+......+|+.+
T Consensus 300 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~- 372 (426)
T PRK12307 300 ------SIGLLMSFLFIFPLFRIPQDNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTF- 372 (426)
T ss_pred ------HHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHH-
Confidence 344444433333322 222222223333444332 3345667788899999999999999999999999996
Q ss_pred hhhHHHHHhhhhh
Q 017795 280 SGVIASGIYDYYA 292 (366)
Q Consensus 280 gp~i~G~l~d~~~ 292 (366)
+|.+.|++.|..+
T Consensus 373 gp~~~g~l~~~~g 385 (426)
T PRK12307 373 NSMAATWLGITMG 385 (426)
T ss_pred HHHHHHHHHHccc
Confidence 9999999998876
No 98
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.35 E-value=9.2e-12 Score=126.35 Aligned_cols=173 Identities=13% Similarity=0.070 Sum_probs=107.9
Q ss_pred hhHHHHHhcHHHHHHHhCCChhH------------H--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHH
Q 017795 150 GSGLTVIDNLGQICQSLGYADTS------------I--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVM 215 (366)
Q Consensus 150 ~~~~~~~~~l~~i~~~~g~~~~~------------~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~ 215 (366)
...++...+.|.+.++.|++... . ...+..++..++.+++++++||+|||+.. .++.+++
T Consensus 302 ~~~y~~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l------~~~~~~~ 375 (502)
T TIGR00887 302 IAFYGVNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQ------LMGFFIL 375 (502)
T ss_pred HHHHccccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHH------HHHHHHH
Confidence 34445666789999988886431 1 23334456667889999999999998654 3444444
Q ss_pred HHHHHHHHh--c--c-hhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhh
Q 017795 216 AFALLYYAI--G--W-PGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDY 290 (366)
Q Consensus 216 ~~~~~l~~~--~--~-~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~ 290 (366)
+++..++.. . . ...+....+...++..+..++.+.+.+|+||.+.|++++|+.+....+|+++ +|.+.|++.|.
T Consensus 376 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~-~~~~~~~l~~~ 454 (502)
T TIGR00887 376 TVLFFVLGFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAII-GQFGFLYLAQH 454 (502)
T ss_pred HHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHH-HHHHhhhhhcc
Confidence 444333321 1 1 1111112112222222345667778899999999999999999999999996 99999999985
Q ss_pred hhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHHhhcHH
Q 017795 291 YAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHRTKS 352 (366)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~~r~ 352 (366)
.+..++ + +....+...|++.+++++++.+.. ++.++++.
T Consensus 455 ~~~~~~-----~-----------------~~~~~~~~~~~i~~~~~~~~~i~~-~~lpEt~~ 493 (502)
T TIGR00887 455 GDPTKG-----Y-----------------PTGIWMGHVLEIFALFMFLGILFT-LLIPETKG 493 (502)
T ss_pred cccccc-----c-----------------cccccchHHHHHHHHHHHHHHHHh-eEeccCCC
Confidence 431100 0 000015667888888887776654 44466654
No 99
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.34 E-value=5.8e-11 Score=116.01 Aligned_cols=149 Identities=15% Similarity=0.098 Sum_probs=122.3
Q ss_pred hhHHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHH
Q 017795 135 KADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQ 212 (366)
Q Consensus 135 ~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~ 212 (366)
++++|+++.+.++...........+|.+.+++|.+..++ ..+...++..+++++.|+++||+|||+.. ..+.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~------~~~~ 78 (381)
T PRK03633 5 TRPVLLLLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSY------YLAS 78 (381)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH------HHHH
Confidence 445788877777776666677788999999999987766 88888999999999999999999998765 5566
Q ss_pred HHHHHHHHHHH-hcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhh
Q 017795 213 VVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDY 290 (366)
Q Consensus 213 ~~~~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~ 290 (366)
++.+++.++.. ..+...++++.++.|++.+..++...+.+.+..+.++++.+++.......+|..+ ||.+++.+.+.
T Consensus 79 ~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-g~~~~~~l~~~ 156 (381)
T PRK03633 79 LIFAAGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVL-GQLLVSKVSTE 156 (381)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH-HHHHHhccccc
Confidence 66666655554 4556677888999999998887777777788888889999999999999999996 99999988765
No 100
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.33 E-value=8.5e-11 Score=115.10 Aligned_cols=175 Identities=14% Similarity=0.078 Sum_probs=121.5
Q ss_pred CHHHHhhhhHHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHH-HHHhhhhhhhhhhhhhhhhhccCch
Q 017795 128 TLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMIS-IWNFLGRVGGGYFSEAIVRKFAYPR 204 (366)
Q Consensus 128 ~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~~~~~~--~~sl~~-i~~~~g~~~~G~lsD~~grr~~~~R 204 (366)
++++.+|++.+|......++..........+.+.+.++.|++..++ ...... +...++.+++|++.||+++|+..
T Consensus 200 ~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l-- 277 (390)
T TIGR02718 200 SLFRFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTF-- 277 (390)
T ss_pred HHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHH--
Confidence 3567888888887776666665555555567788888999998876 334443 35667889999999999987644
Q ss_pred hHHHHHHHHHHHHHH-HHHHh------cchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCC-CchhhHHHHHHhHhhhhH
Q 017795 205 PVAMAVAQVVMAFAL-LYYAI------GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGL-KSFGALYNFLTLASPAGS 276 (366)
Q Consensus 205 ~~~~~~~~~~~~~~~-~l~~~------~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~-~~~g~~~g~~~~~~~~G~ 276 (366)
..+.++.++.. ..+.. .....++...++.+++.|..++...+.+.+..++ +.+|+.+++.+....+|.
T Consensus 278 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~ 353 (390)
T TIGR02718 278 ----ILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGE 353 (390)
T ss_pred ----HHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHH
Confidence 22333221111 11111 1112223333445666777777777777777776 789999999999999999
Q ss_pred HHhhhhHHHHHhhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHH
Q 017795 277 LIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMV 341 (366)
Q Consensus 277 ~i~gp~i~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~ 341 (366)
.+ ||.++|+++|..| |+..|++.+++.+++.+
T Consensus 354 ~~-g~~~~G~l~~~~G--------------------------------~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 354 LI-ASSIAGYLTDRFG--------------------------------YAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HH-HHHHHHHHHHHHc--------------------------------cHHHHHHHHHHHHHHHH
Confidence 96 9999999999887 88899887776666543
No 101
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.33 E-value=4.6e-11 Score=115.30 Aligned_cols=159 Identities=12% Similarity=0.029 Sum_probs=116.6
Q ss_pred CHHHHhhhhHHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchh
Q 017795 128 TLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRP 205 (366)
Q Consensus 128 ~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~ 205 (366)
..++.++++.+|.+.+..++..........++|.+.++.|++.... ..+++.++..++++++|+++||+++|+..
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~--- 265 (355)
T TIGR00896 189 TPVRIWRSPLAWQVTVFFGLQSGLYYSLIGWLPAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGI--- 265 (355)
T ss_pred CCchhhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHH---
Confidence 4567788898988776666665666667788999999999887655 78888999999999999999999543221
Q ss_pred HHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCC-CchhhHHHHHHhHhhhhHHHhhhhHH
Q 017795 206 VAMAVAQVVMAFALLYYAIGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGL-KSFGALYNFLTLASPAGSLIFSGVIA 284 (366)
Q Consensus 206 ~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~-~~~g~~~g~~~~~~~~G~~i~gp~i~ 284 (366)
+.++.++++++.+.+............++.|++.|..++...+.+.+..+. ++++..+++.+....+|..+ +|.++
T Consensus 266 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-gp~~~ 342 (355)
T TIGR00896 266 --VAVLAVLQLVGLCGLLFAPMHGLWAWALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAAL-GPLFV 342 (355)
T ss_pred --HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHH-HHHHH
Confidence 234444555554443322212222345678999988888877777666554 56788999998888899886 99999
Q ss_pred HHHhhhhh
Q 017795 285 SGIYDYYA 292 (366)
Q Consensus 285 G~l~d~~~ 292 (366)
|++.|.++
T Consensus 343 G~l~~~~g 350 (355)
T TIGR00896 343 GVLHDISG 350 (355)
T ss_pred HHHHHHhc
Confidence 99999887
No 102
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.32 E-value=6e-11 Score=119.04 Aligned_cols=159 Identities=14% Similarity=0.133 Sum_probs=109.9
Q ss_pred HHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHh---cc-hh
Q 017795 155 VIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAI---GW-PG 228 (366)
Q Consensus 155 ~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~---~~-~~ 228 (366)
...+.|.+.++.|++.... ......+.+.++.+++|+++||++||+.. ..+.++++++.+++.. .+ ..
T Consensus 290 ~~~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~------i~~~~~~~v~~~~l~~~~~~~~~~ 363 (479)
T PRK10077 290 VLYYAPEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQ------IIGALGMAIGMFSLGTAFYTQAPG 363 (479)
T ss_pred HHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHH------HHhHHHHHHHHHHHHHHHhcCccc
Confidence 4456788888899876543 55567788899999999999999987654 5555555555554431 11 11
Q ss_pred -HHHHHHHHHHHHhhhhh-hhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHh------hhhhhhhhhhhh
Q 017795 229 -EIYVTTVLVGLSYGAHW-AIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIY------DYYAEKQAGLLW 300 (366)
Q Consensus 229 -~l~~~~~l~G~~~g~~~-~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~------d~~~~~~~~~~~ 300 (366)
....+.++++.+.+..+ +..+.+++|.+|.+.|+++.|+.+....+|..+ ++.+.+.+. |..+
T Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~-~~~~~p~~~~~~~~~~~~~-------- 434 (479)
T PRK10077 364 IVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYF-VSWTFPMMDKNSWLVAHFH-------- 434 (479)
T ss_pred HHHHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHH-HHHHhHHHHhccchhhhcc--------
Confidence 22234444454444333 567889999999999999999999999888886 766665444 3333
Q ss_pred hccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHHhhcHH
Q 017795 301 KYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHRTKS 352 (366)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~~r~ 352 (366)
+++.|++.++++++++++.+.+.+++|+
T Consensus 435 ------------------------~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 462 (479)
T PRK10077 435 ------------------------NGFSYWIYGCMGVLAALFMWKFVPETKG 462 (479)
T ss_pred ------------------------CccHHHHHHHHHHHHHHHHHhccccCCC
Confidence 7778888888888877776666666553
No 103
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.31 E-value=1.9e-10 Score=115.87 Aligned_cols=183 Identities=17% Similarity=0.219 Sum_probs=137.9
Q ss_pred HHHHhhhhHHHHHHHHHHHhhhhHHHHHhcHHHHHH-HhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchh
Q 017795 129 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQ-SLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRP 205 (366)
Q Consensus 129 ~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~-~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~ 205 (366)
++++.+.++.+.+++++++..-+..+++.....+.+ ++|++..+. +..+..+.+++|.+++|++.||+|.|.. |.
T Consensus 274 ~k~~~~~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~--~~ 351 (477)
T PF11700_consen 274 FKEIRKLRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTK--RT 351 (477)
T ss_pred HHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchh--HH
Confidence 344555667777777777665555555555666665 699998876 6667788899999999999999998722 11
Q ss_pred HHHHHHHHHHHHHHHHHH--------hcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHH
Q 017795 206 VAMAVAQVVMAFALLYYA--------IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSL 277 (366)
Q Consensus 206 ~~~~~~~~~~~~~~~l~~--------~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~ 277 (366)
+. ....+...++...+. ..+...+++..++.|++.|+.++..-++.+++.|+.+.+..+|+..+.+-..+.
T Consensus 352 l~-~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~ 430 (477)
T PF11700_consen 352 LL-ISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSW 430 (477)
T ss_pred HH-HHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHH
Confidence 11 211111122222221 455677889999999999999999999999999999999999999999999999
Q ss_pred HhhhhHHHHHhhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHH
Q 017795 278 IFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIV 346 (366)
Q Consensus 278 i~gp~i~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~ 346 (366)
+ ||.+.|.+.|.++ +.|..+..+.++.+++.++...+
T Consensus 431 l-GPll~g~i~~~tg-------------------------------~~r~g~~~l~~lf~~gl~ll~~v 467 (477)
T PF11700_consen 431 L-GPLLFGLITDATG-------------------------------SQRYGFLFLLVLFLIGLILLFFV 467 (477)
T ss_pred H-HHHHHHHHHHHhC-------------------------------CchhHHHHHHHHHHHHHHHHhhc
Confidence 6 9999999999987 48889988888888877766544
No 104
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.31 E-value=1.8e-11 Score=122.78 Aligned_cols=144 Identities=11% Similarity=0.090 Sum_probs=116.0
Q ss_pred HhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH---hcchhHHHHHHHHHHH
Q 017795 165 SLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA---IGWPGEIYVTTVLVGL 239 (366)
Q Consensus 165 ~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~---~~~~~~l~~~~~l~G~ 239 (366)
+++++.... +.+.+.++..++.+.+|+++||+|+|+.. ..+.++.+++.++.. ..+...+++.+++.|+
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l------~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~ 143 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSI------GIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGL 143 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhh------HHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHH
Confidence 567766654 78888899999999999999999998765 555555555544432 2234567888999999
Q ss_pred HhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhh-hhhhhhhhhhccCCCCCcccCCCCCCc
Q 017795 240 SYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYY-AEKQAGLLWKYNGNMLPVSFRDQETPT 318 (366)
Q Consensus 240 ~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (366)
+.+..++....+++|.+++++++.+.++...+..+|..+ +|.+.+++.+.. +
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i-~~~l~~~l~~~~~g-------------------------- 196 (465)
T TIGR00894 144 AQGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFI-FLPISGWLCESWGG-------------------------- 196 (465)
T ss_pred hcccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhccCC--------------------------
Confidence 999999999999999999999999999999999999996 999999998874 5
Q ss_pred ccCCcchHHHHHHHHHHHHHHHHHHHHHH
Q 017795 319 CLGSICYSITCGIMAGLCIIAMVMSLIVV 347 (366)
Q Consensus 319 c~g~~~~~~~f~i~~~~~~~~~~~~~~~~ 347 (366)
|++.|++.+++.++..++.+.+.
T Consensus 197 ------w~~~f~i~~~~~~~~~~~~~~~~ 219 (465)
T TIGR00894 197 ------WPMIFYVFGIVGCAWSLLWFVFP 219 (465)
T ss_pred ------CCeehhhhhHHHHHHHHHHHHHh
Confidence 99999998887766655554443
No 105
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.30 E-value=2.8e-11 Score=99.31 Aligned_cols=131 Identities=11% Similarity=0.169 Sum_probs=104.5
Q ss_pred HHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH-hcchhHHHHHHHHHHHHhhhhhhhHHHHHHHh
Q 017795 177 MISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASEL 255 (366)
Q Consensus 177 l~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~ 255 (366)
...++..++.+..|+++||++||+.. ..+..+..++.++.. ..+...+.+..++.|++.+...+.....+.|.
T Consensus 6 ~~~~~~~~~~~~~g~~~d~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 79 (141)
T TIGR00880 6 GYALGQLIYSPLSGLLTDRFGRKPVL------LVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADI 79 (141)
T ss_pred eehhHHHHHHhhHHHHHhhcchhHHH------HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 45677888999999999999987654 445555555554444 34455667778889999998889999999999
Q ss_pred hCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHH
Q 017795 256 FGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGL 335 (366)
Q Consensus 256 f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~ 335 (366)
++.++++...++.+....+|..+ +|.+.|.+.+..+ |++.|++.+.+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~--------------------------------~~~~~~~~~~~ 126 (141)
T TIGR00880 80 YPPEERGVALGLMSAGIALGPLL-GPPLGGVLAQFLG--------------------------------WRAPFLFLAIL 126 (141)
T ss_pred CChhhhhHHHHHHHHhHHHHHHH-hHHhHHHHhcccc--------------------------------hHHHHHHHHHH
Confidence 99999999999999999999996 9999999987766 99999988877
Q ss_pred HHHHHHHHHHH
Q 017795 336 CIIAMVMSLIV 346 (366)
Q Consensus 336 ~~~~~~~~~~~ 346 (366)
++++.+....+
T Consensus 127 ~~~~~~~~~~~ 137 (141)
T TIGR00880 127 ALAAFILLAFL 137 (141)
T ss_pred HHHHHHHHhhc
Confidence 77766655544
No 106
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.30 E-value=2.1e-12 Score=125.74 Aligned_cols=175 Identities=15% Similarity=0.191 Sum_probs=141.8
Q ss_pred HHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHH
Q 017795 139 LLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMA 216 (366)
Q Consensus 139 ~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~ 216 (366)
.++++........-+++...++.+.+.++.+++.. +.+.+.+...+..|+.|+++||+.||+.+ .++..+-.
T Consensus 36 ~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~------~vG~~iW~ 109 (493)
T KOG1330|consen 36 VILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVI------AVGIFIWT 109 (493)
T ss_pred HHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEE------eeHHHHHH
Confidence 34445555556666667777778888888887765 77788888999999999999999998877 66666666
Q ss_pred HHHHHHHh-cchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhhhhh
Q 017795 217 FALLYYAI-GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQ 295 (366)
Q Consensus 217 ~~~~l~~~-~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~~~~ 295 (366)
++.+...+ ...+.+.+++.++|+|-+...++.+++++|.|+...|++.+++++.+.++|+.+ |-++++.+.+.++
T Consensus 110 ~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsgl-G~vvgs~va~~~~--- 185 (493)
T KOG1330|consen 110 LAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGL-GYVVGSVVASLTF--- 185 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccce-eEEeeeeeccCcc---
Confidence 66555553 445678899999999999999999999999999999999999999999999995 8777777777666
Q ss_pred hhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHHhhcH
Q 017795 296 AGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHRTK 351 (366)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~~r 351 (366)
.|||+|+..+++.++..++..++.++-+
T Consensus 186 ----------------------------~Wr~af~~~avl~vi~~~L~~~f~~eP~ 213 (493)
T KOG1330|consen 186 ----------------------------WWRWAFRGSAVLGVIVGLLVFLFVREPE 213 (493)
T ss_pred ----------------------------ceEEEEEeehHHHHHHHHHHHhhccCcc
Confidence 4999999999999998888877766533
No 107
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.30 E-value=1.6e-10 Score=113.32 Aligned_cols=179 Identities=11% Similarity=0.111 Sum_probs=128.0
Q ss_pred CHHHHhhhhHHHHHHHHHHHhhhhHHHHHhcHHHHHHHh----CCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhcc
Q 017795 128 TLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSL----GYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFA 201 (366)
Q Consensus 128 ~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~----g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~ 201 (366)
+.++.++++++|.+.+..++..........+.+.+.++. +.+.... ..++..+...++.+..|++.||+++|+.
T Consensus 207 ~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~ 286 (396)
T TIGR00882 207 LALELFRQRKFWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNA 286 (396)
T ss_pred HHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchh
Confidence 467788899888766555444444344545677776654 3333222 5666677788888999999999998765
Q ss_pred CchhHHHHHHHHHHHHHHHHHH-hcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHH-HHhHhhhhHHHh
Q 017795 202 YPRPVAMAVAQVVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNF-LTLASPAGSLIF 279 (366)
Q Consensus 202 ~~R~~~~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~-~~~~~~~G~~i~ 279 (366)
. .++.++.+++..++. ..+...+++..++.|++.............+.++.+.+++..+. .+....+|+.+
T Consensus 287 l------~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~- 359 (396)
T TIGR00882 287 L------LIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIF- 359 (396)
T ss_pred H------HHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHH-
Confidence 4 555555665555544 44556666777778887766555556667788888888887776 56788899996
Q ss_pred hhhHHHHHhhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHH
Q 017795 280 SGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLI 345 (366)
Q Consensus 280 gp~i~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~ 345 (366)
+|.++|++.|..| |+.+|++.+++.++..+...+
T Consensus 360 ~~~l~G~l~~~~G--------------------------------~~~~f~~~~~~~~i~~~~~~~ 393 (396)
T TIGR00882 360 LSTLAGNMYDSIG--------------------------------FQGAYLVLGCIVLLFTLISVF 393 (396)
T ss_pred HHHhHHHHHHhcc--------------------------------cHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999887 999999999888777666543
No 108
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.30 E-value=9.7e-11 Score=113.21 Aligned_cols=165 Identities=13% Similarity=-0.004 Sum_probs=115.3
Q ss_pred HHhhhhHHHHHhcHHHHH-HHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHH
Q 017795 146 VLASGSGLTVIDNLGQIC-QSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYY 222 (366)
Q Consensus 146 ~~~~~~~~~~~~~l~~i~-~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~ 222 (366)
++...+.......+|.+. +++|.+.... ..+.+.+...+..++.|+++||+|||+.+ +..+.++..++.+++
T Consensus 7 ~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~-----~~~~~~~~~~~~~~~ 81 (375)
T TIGR00899 7 FLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGL-----ILFCCLLAALACLLF 81 (375)
T ss_pred HHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHH-----HHHHHHHHHHHHHHH
Confidence 333333344555666654 6789987765 67778888899999999999999986543 133344444444444
Q ss_pred H-hcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhH--HHHHHhHhhhhHHHhhhhHHHHHhhhhhhhhhhhh
Q 017795 223 A-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGAL--YNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLL 299 (366)
Q Consensus 223 ~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~--~g~~~~~~~~G~~i~gp~i~G~l~d~~~~~~~~~~ 299 (366)
+ ..+...+++..++.|.+.+...+...+...|..+.+.++.. .+.......+|..+ ||.++|++.+..+
T Consensus 82 ~~~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i-g~~~~~~l~~~~~------- 153 (375)
T TIGR00899 82 AWNRNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVI-GPPLAFWLALGFG------- 153 (375)
T ss_pred HhcchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHH-hhhHHHHHHHhcc-------
Confidence 4 34445566667777766666667667777888776666543 57777788899986 9999999988776
Q ss_pred hhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHHh
Q 017795 300 WKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVH 348 (366)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~ 348 (366)
|++.|++.+.++++..++.+.+.+
T Consensus 154 -------------------------~~~~f~~~~~~~~~~~~~~~~~~~ 177 (375)
T TIGR00899 154 -------------------------FTVMFLTAALAFVLCGVLVWLFLP 177 (375)
T ss_pred -------------------------cHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999998877776666555444
No 109
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.30 E-value=2.1e-10 Score=112.08 Aligned_cols=158 Identities=11% Similarity=-0.003 Sum_probs=114.8
Q ss_pred CCHHHHhhhhHHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCch
Q 017795 127 FTLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPR 204 (366)
Q Consensus 127 ~~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R 204 (366)
.++++.++++.+|.+.+..++.......+...+|.+.++.|++.... ..++..+...++.++.|++.||+++|+..
T Consensus 196 ~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l-- 273 (382)
T PRK11128 196 PAWKALLKEPTVWRFLLCVSLLQGSHAAYYGFSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLL-- 273 (382)
T ss_pred chHHHHHcChhHHHHHHHHHHHHHHhHhHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH--
Confidence 46788999999998777666655555556667788888889887654 55566677777888888888888876544
Q ss_pred hHHHHHHHHHHHHHHHHHH-hcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHH-hHhhhhHHHhhhh
Q 017795 205 PVAMAVAQVVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLT-LASPAGSLIFSGV 282 (366)
Q Consensus 205 ~~~~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~-~~~~~G~~i~gp~ 282 (366)
..+.++.+++.+++. ..++..+++..++.|++.+...+....++.+. +.+++++..+..+ ....+|..+ ||.
T Consensus 274 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~i-g~~ 347 (382)
T PRK11128 274 ----LLSAICGVVRWGLMGSTTALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAI-MTV 347 (382)
T ss_pred ----HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHH-HHH
Confidence 556666666655554 44455667778888988887666666666665 5566788888876 445667675 999
Q ss_pred HHHHHhhhhh
Q 017795 283 IASGIYDYYA 292 (366)
Q Consensus 283 i~G~l~d~~~ 292 (366)
++|.++|..+
T Consensus 348 i~G~l~~~~g 357 (382)
T PRK11128 348 LSGFLYQHLG 357 (382)
T ss_pred HHHHHHHhcc
Confidence 9999999887
No 110
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.29 E-value=1.7e-10 Score=114.79 Aligned_cols=137 Identities=14% Similarity=0.039 Sum_probs=98.2
Q ss_pred HHHHhhhhHHHHHhcHHHHHHHhC---CChhHH-----HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHH
Q 017795 144 SLVLASGSGLTVIDNLGQICQSLG---YADTSI-----YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVM 215 (366)
Q Consensus 144 ~~~~~~~~~~~~~~~l~~i~~~~g---~~~~~~-----~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~ 215 (366)
+.++-......+....|.+.++++ .+..+. ..+...++..+|.+++|+++||+|||+.+ ..+.+++
T Consensus 30 ~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l------~~~~~~~ 103 (432)
T PRK10406 30 GNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSM------LISVCMM 103 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHH------HHHHHHH
Confidence 344444444455566777788874 333321 33444555668899999999999998766 6667777
Q ss_pred HHHHHHHHh-cch--------hHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHH
Q 017795 216 AFALLYYAI-GWP--------GEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASG 286 (366)
Q Consensus 216 ~~~~~l~~~-~~~--------~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~ 286 (366)
+++.++.+. .+. ..+++++++.|++.|+.++...++++|.+++++||...++.......|..+ ++.+.+.
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~-~~~~~~~ 182 (432)
T PRK10406 104 CFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLL-ALLVVVV 182 (432)
T ss_pred HHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHH-HHHHHHH
Confidence 666666543 222 257789999999999999999999999999999999999887777777774 6655444
Q ss_pred H
Q 017795 287 I 287 (366)
Q Consensus 287 l 287 (366)
+
T Consensus 183 ~ 183 (432)
T PRK10406 183 L 183 (432)
T ss_pred H
Confidence 3
No 111
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.29 E-value=2.7e-10 Score=111.85 Aligned_cols=157 Identities=17% Similarity=0.131 Sum_probs=108.2
Q ss_pred hhhhHHHHHhcHHHHHH-HhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH-
Q 017795 148 ASGSGLTVIDNLGQICQ-SLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA- 223 (366)
Q Consensus 148 ~~~~~~~~~~~l~~i~~-~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~- 223 (366)
.......+..++|.+.+ ++|++.... ..+...+...++++++|+++||++||+.. ..+.+...+....+.
T Consensus 228 ~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~------~~~~~~~~~~~~~~~~ 301 (393)
T PRK15011 228 MWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLM------RVAAVAGVCFYAGMLM 301 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHH------HHHHHHHHHHHHHHHH
Confidence 33333445567887764 578887654 55555667788899999999999987533 222222222222222
Q ss_pred hcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhhhhhhhhhhhcc
Q 017795 224 IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYN 303 (366)
Q Consensus 224 ~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~~~~~~~~~~~~ 303 (366)
..++...++..++.+++.|...+..+....|.+|. ++|++.++.+....+|..+ +|.++|.++|..+
T Consensus 302 ~~~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~-g~~l~G~i~~~~g----------- 368 (393)
T PRK15011 302 AHSPAILLGLQLLNAIYIGILGGIGMLYFQDLMPG-QAGSATTLYTNTSRVGWII-AGSLAGIVAEIWN----------- 368 (393)
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHHH-HHHHHHHHHHHhh-----------
Confidence 33344445555666666666666677778898874 5999999998888999996 9999999999877
Q ss_pred CCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHH
Q 017795 304 GNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSL 344 (366)
Q Consensus 304 ~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~ 344 (366)
|+..|++.+++++++.++.+
T Consensus 369 ---------------------~~~~~~~~~~~~~~~~~~~~ 388 (393)
T PRK15011 369 ---------------------YHAVFWFALVMIIATLFCLL 388 (393)
T ss_pred ---------------------hHHHHHHHHHHHHHHHHHHH
Confidence 99999887777766555544
No 112
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.29 E-value=1.9e-10 Score=109.80 Aligned_cols=153 Identities=13% Similarity=0.098 Sum_probs=114.3
Q ss_pred HHhhhhHHHHHHHHHHHhhhhHHHHHhcHHHHHHH---hCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchh
Q 017795 131 QALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS---LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRP 205 (366)
Q Consensus 131 ~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~---~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~ 205 (366)
..++++.+|+..++.++..+...++.+|++.+..+ +|++.... ..+.+..+.++||++.++++||+++|+..
T Consensus 135 ~~~~~~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l--- 211 (310)
T TIGR01272 135 SAFQFTHLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYL--- 211 (310)
T ss_pred hHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHH---
Confidence 46678889988888888888888889999999975 47876655 78888889999999999999999876543
Q ss_pred HHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHH
Q 017795 206 VAMAVAQVVMAFALLYYAIGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIAS 285 (366)
Q Consensus 206 ~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G 285 (366)
.++.++.+++.+++...+.....+..+++|++.+..++...+...+.++.+ .+++.++. ..+.+|+.+ .|.+.|
T Consensus 212 ---~~~~~l~~~~~~l~~~~~~~~~~~~~~l~g~~~s~i~P~~~s~a~~~~~~~-~~~asai~-~~~~~Gg~i-~P~l~G 285 (310)
T TIGR01272 212 ---AFNAFLAVLLSIGAALTHGYVAMWFVLALGLFNSIMFPTIFSLALNALGRH-TSQGSGIL-CLAIVGGAI-VPLLQG 285 (310)
T ss_pred ---HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh-hhhhHHHH-HHHHhcchH-HHHHHH
Confidence 344444444444333322233344666789999999999888888888653 45566665 456688886 899999
Q ss_pred HHhhhhh
Q 017795 286 GIYDYYA 292 (366)
Q Consensus 286 ~l~d~~~ 292 (366)
.+.|..+
T Consensus 286 ~lad~~g 292 (310)
T TIGR01272 286 SLADCLG 292 (310)
T ss_pred HHHHhcc
Confidence 9999877
No 113
>PRK09952 shikimate transporter; Provisional
Probab=99.29 E-value=4.1e-10 Score=112.41 Aligned_cols=145 Identities=16% Similarity=0.040 Sum_probs=100.4
Q ss_pred HHHHHHHHHHhhhhHHHHHhcHHHH-HHHh--CCChhHHHH------HHHHHHHhhhhhhhhhhhhhhhhhccCchhHHH
Q 017795 138 FLLLFFSLVLASGSGLTVIDNLGQI-CQSL--GYADTSIYV------SMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAM 208 (366)
Q Consensus 138 ~~ll~~~~~~~~~~~~~~~~~l~~i-~~~~--g~~~~~~~~------sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~ 208 (366)
++..++..++-......+....|.+ .+++ +.++..... ++..++..+|.++.|+++||+|||+.+
T Consensus 24 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l------ 97 (438)
T PRK09952 24 ALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPAMGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRML------ 97 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHH------
Confidence 4444455555444444444444443 3444 455443211 233455667888899999999998765
Q ss_pred HHHHHHHHHHHHHHHhc-chh--------HHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHh
Q 017795 209 AVAQVVMAFALLYYAIG-WPG--------EIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIF 279 (366)
Q Consensus 209 ~~~~~~~~~~~~l~~~~-~~~--------~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~ 279 (366)
..+.++.+++.++.+.. +.. .+++++++.|++.|+.++....+++|.+|+++||...+....+..+|..+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l- 176 (438)
T PRK09952 98 MLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLL- 176 (438)
T ss_pred HHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHH-
Confidence 66777777776666533 322 36778999999999999988999999999999999999999888888885
Q ss_pred hhhHHHHHhh
Q 017795 280 SGVIASGIYD 289 (366)
Q Consensus 280 gp~i~G~l~d 289 (366)
++.+.+.+..
T Consensus 177 ~~~~~~~l~~ 186 (438)
T PRK09952 177 STGLVSLISM 186 (438)
T ss_pred HHHHHHHHHH
Confidence 7766666553
No 114
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.28 E-value=2.5e-10 Score=113.06 Aligned_cols=145 Identities=13% Similarity=0.006 Sum_probs=115.8
Q ss_pred HHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHH
Q 017795 138 FLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVM 215 (366)
Q Consensus 138 ~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~ 215 (366)
++++...++............+|++.+++|.+..+. ..+...++..++.+..|++.||+|||+.. ..+.+++
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~------~~g~~l~ 78 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGI------LLGLFLY 78 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHH------HHHHHHH
Confidence 455555555444443444567888989999988776 78888899999999999999999998766 7777777
Q ss_pred HHHHHHHHh----cchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhh
Q 017795 216 AFALLYYAI----GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYD 289 (366)
Q Consensus 216 ~~~~~l~~~----~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d 289 (366)
+++.+++.. .+...+++..++.|+|.|...+...+++.+..++++++...++.+....+|+.+ ||.+++.+..
T Consensus 79 ~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~-g~~i~~~l~~ 155 (410)
T TIGR00885 79 ALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSII-GMVVAQQLIL 155 (410)
T ss_pred HHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHh
Confidence 777766432 244567788889999999999888889999998889999999999999999996 9999988764
No 115
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.27 E-value=1.6e-10 Score=110.55 Aligned_cols=157 Identities=15% Similarity=0.093 Sum_probs=117.7
Q ss_pred HHHHhhhhHHHHHHHHHHHhhhhHHHHH-hcHHHHHHH-hCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCch
Q 017795 129 LPQALMKADFLLLFFSLVLASGSGLTVI-DNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPR 204 (366)
Q Consensus 129 ~~~~l~~~~~~ll~~~~~~~~~~~~~~~-~~l~~i~~~-~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R 204 (366)
+++.++++.+|.+.+..++......... .+.|.+.++ +|++..+. ..+...++..+++++.|+++||++||+..
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-- 280 (365)
T TIGR00900 203 IKFVLKNPLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALM-- 280 (365)
T ss_pred HHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHH--
Confidence 3455677777776666555555444444 678888876 78877655 67777888899999999999999876543
Q ss_pred hHHHHHHHHHHHHHHHHHHh-c-chhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhh
Q 017795 205 PVAMAVAQVVMAFALLYYAI-G-WPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGV 282 (366)
Q Consensus 205 ~~~~~~~~~~~~~~~~l~~~-~-~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~ 282 (366)
..+..+.+++.+++.. . +...+++..++.|++.+...+...+++.|.+|++++|+.+++.+....+|..+ +|.
T Consensus 281 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-g~~ 355 (365)
T TIGR00900 281 ----TGAIFVIGLAILVVGLTPPNFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPL-GLI 355 (365)
T ss_pred ----HHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH-HHH
Confidence 4444444544444442 2 24455677788899998888888899999999999999999999999999996 999
Q ss_pred HHHHHhhhhh
Q 017795 283 IASGIYDYYA 292 (366)
Q Consensus 283 i~G~l~d~~~ 292 (366)
++|.+.|..|
T Consensus 356 ~~g~l~~~~g 365 (365)
T TIGR00900 356 LAGPLADHLG 365 (365)
T ss_pred HHHHHHHHcC
Confidence 9999998653
No 116
>PRK15075 citrate-proton symporter; Provisional
Probab=99.27 E-value=3e-10 Score=113.09 Aligned_cols=154 Identities=12% Similarity=0.090 Sum_probs=98.9
Q ss_pred HhhhhHHHHHH-HHHHHhhhhHHHHHhcHHHHHHH-hCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHH
Q 017795 132 ALMKADFLLLF-FSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVA 207 (366)
Q Consensus 132 ~l~~~~~~ll~-~~~~~~~~~~~~~~~~l~~i~~~-~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~ 207 (366)
..++++.|... +..++..........++|.+.++ +|++..+. ...++.+++.++++++|+++||++||+..
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~----- 307 (434)
T PRK15075 233 LAANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVL----- 307 (434)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHH-----
Confidence 34455555443 22333334445567789998876 79987655 55667788899999999999999987543
Q ss_pred HHHHHHHHHH-HHHH--HHhcch--hHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHh-hhhHHHhhh
Q 017795 208 MAVAQVVMAF-ALLY--YAIGWP--GEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLAS-PAGSLIFSG 281 (366)
Q Consensus 208 ~~~~~~~~~~-~~~l--~~~~~~--~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~-~~G~~i~gp 281 (366)
..+.++.++ +... .....+ ..+.+..++.+++.+...+..+.+++|.+|++.++++.++.+... .+++.+ +|
T Consensus 308 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~-~p 385 (434)
T PRK15075 308 -IAFTVLAILTAYPALSWLVAAPSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGF-TP 385 (434)
T ss_pred -HHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhh-HH
Confidence 222222111 1111 111122 223333445566766666667788899999999999999865444 445675 89
Q ss_pred hHHHHHhhhhh
Q 017795 282 VIASGIYDYYA 292 (366)
Q Consensus 282 ~i~G~l~d~~~ 292 (366)
.+.|++.|..+
T Consensus 386 ~~~g~i~~~~g 396 (434)
T PRK15075 386 AISTWLIHVTG 396 (434)
T ss_pred HHHHHHHHhcC
Confidence 99999999876
No 117
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.27 E-value=1.3e-10 Score=114.02 Aligned_cols=172 Identities=15% Similarity=0.125 Sum_probs=117.8
Q ss_pred hhHHHHHHHHHHHhhhhHHHHHhcHHHHHH-HhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHH
Q 017795 135 KADFLLLFFSLVLASGSGLTVIDNLGQICQ-SLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVA 211 (366)
Q Consensus 135 ~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~-~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~ 211 (366)
++++|.+...+++.......+..++|.+.+ ++|++..+. ..++..+...++++.+|+++||+|||+... .....
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~---~~~~~ 77 (396)
T TIGR00882 1 NTNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLL---WIISG 77 (396)
T ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHH---HHHHH
Confidence 468898888888887777777778888765 579988776 899999999999999999999999987651 11111
Q ss_pred HHHHHHHHHHHHhcc------hhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHH
Q 017795 212 QVVMAFALLYYAIGW------PGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIAS 285 (366)
Q Consensus 212 ~~~~~~~~~l~~~~~------~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G 285 (366)
..+.......+.... ....++..++.|++.+...+....+..+.- ++.+..+|.......+|..+ ||.++|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~-g~~~~g 154 (396)
T TIGR00882 78 LLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVS--RNSNFEYGKARMFGCVGWAL-CASIAG 154 (396)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhh--hhcccccchhhhhcccHHHH-HHHHHh
Confidence 111111111111111 112344456677777776666666666642 33456777777888899996 999999
Q ss_pred HHhhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHH
Q 017795 286 GIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLI 345 (366)
Q Consensus 286 ~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~ 345 (366)
.+.+. + |+..|++.+++.++.+++.+.
T Consensus 155 ~l~~~-~--------------------------------~~~~f~~~~~~~~~~~~~~~~ 181 (396)
T TIGR00882 155 ILFSI-D--------------------------------PQIVFWLGSGFALILMLLLMF 181 (396)
T ss_pred hhhcc-C--------------------------------chHHHHHHHHHHHHHHHHHHH
Confidence 88753 4 899999888877776655543
No 118
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.27 E-value=2.8e-10 Score=111.32 Aligned_cols=177 Identities=18% Similarity=0.113 Sum_probs=112.4
Q ss_pred HHHhhhhHHHHHHHHHHHhhhhHHHHHhcHHHHH-HHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhH
Q 017795 130 PQALMKADFLLLFFSLVLASGSGLTVIDNLGQIC-QSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPV 206 (366)
Q Consensus 130 ~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~-~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~ 206 (366)
.+.++++.+|.++...++..........+++.+. +.+|++.... +.++..++..+++++.|+++||+++|+..
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~---- 268 (382)
T PRK10091 193 FHFLRSPAPWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIA---- 268 (382)
T ss_pred HHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHH----
Confidence 3566788888776665554443333334445444 4578887665 67888899999999999999999886544
Q ss_pred HHHHHHHHHHHHHHHHH--hcchhHHHHHHHHHHHHhhhhhhhHH-HHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhH
Q 017795 207 AMAVAQVVMAFALLYYA--IGWPGEIYVTTVLVGLSYGAHWAIVP-AAASELFGLKSFGALYNFLTLASPAGSLIFSGVI 283 (366)
Q Consensus 207 ~~~~~~~~~~~~~~l~~--~~~~~~l~~~~~l~G~~~g~~~~~~~-~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i 283 (366)
..+..+++++.+++. ..+.....+..++.+.+.++..+... ....+..+.+..+.+. .+....+|..+ ||.+
T Consensus 269 --~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~-Gp~~ 343 (382)
T PRK10091 269 --AVTDFIIVLALLMLFFFGGMKTASLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAAG--GQIAFNLGSAI-GAYC 343 (382)
T ss_pred --HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchHHHHHH--HHHHHHHHHHH-HHHH
Confidence 444555555544432 22233334444455555444333333 3444545555565543 35567889996 9999
Q ss_pred HHHHhhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHH
Q 017795 284 ASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIV 346 (366)
Q Consensus 284 ~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~ 346 (366)
+|+++|.++ +|++.+.+.+++++++......+
T Consensus 344 ~G~l~~~~~-------------------------------~~~~~~~~~~~~~~~~~~~~~~~ 375 (382)
T PRK10091 344 GGMMLTLGL-------------------------------AYNYVALPAALLSFAAMSSLLLY 375 (382)
T ss_pred hHHHHHccc-------------------------------CcchHHHHHHHHHHHHHHHHHHH
Confidence 999999764 39999998887776655544443
No 119
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.27 E-value=9.9e-11 Score=115.84 Aligned_cols=173 Identities=14% Similarity=0.093 Sum_probs=112.2
Q ss_pred HhhhhHHHHHHHHHHHhhhhHHHHHhcHHHHHHH-hCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHH
Q 017795 132 ALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAM 208 (366)
Q Consensus 132 ~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~-~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~ 208 (366)
.++++++|.+.+.+++...+...+...+|.+.++ +|++..++ ..+...+...++++++|+++||+|||+..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~------ 79 (420)
T PRK09528 6 YLKNPNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHL------ 79 (420)
T ss_pred hhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHH------
Confidence 4567789998888888777666667777777766 89998776 89999999999999999999999987654
Q ss_pred HHHHHHHHHHHH---HHHhcch-h-HH----HHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHh
Q 017795 209 AVAQVVMAFALL---YYAIGWP-G-EI----YVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIF 279 (366)
Q Consensus 209 ~~~~~~~~~~~~---l~~~~~~-~-~l----~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~ 279 (366)
.++..+.+++.. ....... . .. +++.++.|.+.....+....+..+ + .++++..+|.......+|..+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~g~~~g~~~~~~~~g~~i- 156 (420)
T PRK09528 80 LWIISGLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIER-V-SRRSGFEYGRARMWGSLGWAL- 156 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHH-H-HhhccccchhhHHhhhHHHHH-
Confidence 222222222211 1111100 0 11 122222333332322333333322 2 345677888888888999996
Q ss_pred hhhHHHHHhhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHH
Q 017795 280 SGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIV 346 (366)
Q Consensus 280 gp~i~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~ 346 (366)
+|.++|++.+. + |+..|++.+++++++.++.+..
T Consensus 157 ~~~~~g~l~~~-~--------------------------------~~~~f~~~~~~~~~~~~~~~~~ 190 (420)
T PRK09528 157 CAFIAGILFNI-N--------------------------------PQINFWLGSGSALILLVLLFFA 190 (420)
T ss_pred HHHHHHHHHhc-C--------------------------------chHhHHHHHHHHHHHHHHHhcc
Confidence 99999999863 4 8889988887777665555443
No 120
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.26 E-value=1.5e-10 Score=106.44 Aligned_cols=151 Identities=18% Similarity=0.097 Sum_probs=120.2
Q ss_pred hhHHHHHHHHHHHhhhhHHHHHhcHHHHHH-HhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHH
Q 017795 135 KADFLLLFFSLVLASGSGLTVIDNLGQICQ-SLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVA 211 (366)
Q Consensus 135 ~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~-~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~ 211 (366)
.+.||++++..++.+....-++..-|.+.+ .+|+++.++ ..+.....+.+-.++.|.++|++|++.. +.+.+
T Consensus 263 ~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~-----wv~~a 337 (459)
T KOG4686|consen 263 YPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLW-----WVASA 337 (459)
T ss_pred CccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceeh-----hHHHH
Confidence 567999998888877776666665555554 589998776 7888888888899999999999998653 44666
Q ss_pred HHHHHHHHHHHHhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhh
Q 017795 212 QVVMAFALLYYAIGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYY 291 (366)
Q Consensus 212 ~~~~~~~~~l~~~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~ 291 (366)
.+....++..+.+.. ..-|++..+.|+++...-...|..++.+.|.++.|++||+.....++|-.+ .|+++|.+.|..
T Consensus 338 ~~~tl~~H~~l~Ft~-lsPy~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~-i~Iiag~i~d~~ 415 (459)
T KOG4686|consen 338 CILTLLGHSGLFFTF-LSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAF-IPIIAGFIADGD 415 (459)
T ss_pred HHHHHHHhhhHHhhh-ccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhH-HhhhhheeecCC
Confidence 677777777765432 223567778898888776778888899999999999999999999999996 799999999987
Q ss_pred h
Q 017795 292 A 292 (366)
Q Consensus 292 ~ 292 (366)
+
T Consensus 416 g 416 (459)
T KOG4686|consen 416 G 416 (459)
T ss_pred C
Confidence 6
No 121
>TIGR00895 2A0115 benzoate transport.
Probab=99.25 E-value=8.6e-11 Score=113.85 Aligned_cols=144 Identities=11% Similarity=0.103 Sum_probs=107.7
Q ss_pred HHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHH
Q 017795 137 DFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVV 214 (366)
Q Consensus 137 ~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~ 214 (366)
.++.+++.+++..........++|.+.+++|++.... ..++..++..++++++|+++||+++|. . .....+.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~-----~~~~~~~ 324 (398)
T TIGR00895 251 ITVLLWLLYFMLLVGVYFLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRV-T-----ALLLLLG 324 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHH-H-----HHHHHHH
Confidence 3444555555555555566778888888899887655 777888899999999999999998862 2 1222222
Q ss_pred HHHHHHHHH-hcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHH
Q 017795 215 MAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGI 287 (366)
Q Consensus 215 ~~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l 287 (366)
...+.++.. ..+....++..++.|++.+...+...+.++|.+|++++|+++|+.+....+|..+ ||.++|++
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~-g~~~~G~l 397 (398)
T TIGR00895 325 AVFAVLVGSTLFSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAII-GPILAGYL 397 (398)
T ss_pred HHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHH-HHHhHHhc
Confidence 222222222 3445566777888999999989999999999999999999999999999999996 99999976
No 122
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.24 E-value=1.7e-10 Score=116.43 Aligned_cols=132 Identities=13% Similarity=0.172 Sum_probs=95.2
Q ss_pred HHHhcHHHHHH-HhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH-hcchh-
Q 017795 154 TVIDNLGQICQ-SLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IGWPG- 228 (366)
Q Consensus 154 ~~~~~l~~i~~-~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~-~~~~~- 228 (366)
....++|.+.+ ++|++..++ ..+...++..+|++++|+++||++||+.. .++.++.+++.+++. .....
T Consensus 293 ~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~ 366 (496)
T PRK03893 293 PIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAY------VCSLLISQLLIIPVFAIGGANV 366 (496)
T ss_pred hHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHH------HHHHHHHHHHHHHHhhccccHH
Confidence 45567899885 789988765 78888899999999999999999987543 333333333333222 22222
Q ss_pred -HHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhh
Q 017795 229 -EIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYA 292 (366)
Q Consensus 229 -~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~ 292 (366)
.+.+..++.++...+..++.+++++|.++.+.+|+.+++.+....+|+.+ ||.++|.+.|..+
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~l-gp~l~g~l~~~~g 430 (496)
T PRK03893 367 WVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGAL-APILGALIAQRLD 430 (496)
T ss_pred HHHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHH-HHHHHHHHhccCC
Confidence 22233333333333445677888999999999999999999999999996 9999999999887
No 123
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.24 E-value=9.4e-10 Score=111.56 Aligned_cols=182 Identities=13% Similarity=0.117 Sum_probs=118.5
Q ss_pred HHHHhhhhHHHHHHHHHHHhhhhHHHHHhcHHHHH-HHhCCChhHH--HH-HHHHHHHhhhhhhhhhhhhhhhhhccCch
Q 017795 129 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQIC-QSLGYADTSI--YV-SMISIWNFLGRVGGGYFSEAIVRKFAYPR 204 (366)
Q Consensus 129 ~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~-~~~g~~~~~~--~~-sl~~i~~~~g~~~~G~lsD~~grr~~~~R 204 (366)
+++.++++.+|.+.+..++..........+.+++. +++|++..+. .. .+..++.++|.+++|+++||+++|+..
T Consensus 215 l~~~~~~~~~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l-- 292 (491)
T PRK11010 215 LRDFFGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRAL-- 292 (491)
T ss_pred HHHHHcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH--
Confidence 45566666667555444443333333444555554 5689988776 33 344578889999999999999986432
Q ss_pred hHHHHHHHHHHHHHHHHHHhc--chhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhh
Q 017795 205 PVAMAVAQVVMAFALLYYAIG--WPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGV 282 (366)
Q Consensus 205 ~~~~~~~~~~~~~~~~l~~~~--~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~ 282 (366)
....+...+..+.+.++... +...+....++..++.|...+...+...++.+.+..++.+++.+....+|..+ ++.
T Consensus 293 -~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~-~~~ 370 (491)
T PRK11010 293 -MIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVY-VGP 370 (491)
T ss_pred -HHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHH-HHH
Confidence 11111112222222222222 22223334444444555455666778889998889999999999999999996 778
Q ss_pred HHHHHhhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHH
Q 017795 283 IASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIV 346 (366)
Q Consensus 283 i~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~ 346 (366)
++|+++|..| |+..|.+.+++++++.++...+
T Consensus 371 ~~G~l~~~~G--------------------------------~~~~f~~~~~~~l~~l~~~~~~ 402 (491)
T PRK11010 371 VAGWFVEAHG--------------------------------WPTFYLFSVAAAVPGLLLLLVC 402 (491)
T ss_pred HHHHHHHHhC--------------------------------hHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999877 9999999888888877666554
No 124
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.24 E-value=1.7e-10 Score=111.38 Aligned_cols=131 Identities=13% Similarity=0.146 Sum_probs=105.0
Q ss_pred HHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHhcchhHHH
Q 017795 154 TVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAIGWPGEIY 231 (366)
Q Consensus 154 ~~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~~~~~~l~ 231 (366)
.+...+|.+.+++|++..+. ..+++.++..++.+..|+++||+|||+.. ..+.++.+++.+.....+...++
T Consensus 18 ~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~------~~~~~~~~~~~~~~~~~~~~~l~ 91 (355)
T TIGR00896 18 SVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSV------AAGLLLIAAGILIRSAPGTALLF 91 (355)
T ss_pred cCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHH------HHHHHHHHHHHHHHHhccHHHHH
Confidence 34567899999999998776 78889999999999999999999998655 44554555554444344556677
Q ss_pred HHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhh
Q 017795 232 VTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYA 292 (366)
Q Consensus 232 ~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~ 292 (366)
+.+++.|++.+...+..+..+.|.++ ++++.+.++.+....+|..+ ++.+.+.+.+..+
T Consensus 92 ~~~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i-~~~~~~~l~~~~~ 150 (355)
T TIGR00896 92 AGTALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAAL-AAAATVPLAQHSG 150 (355)
T ss_pred HHHHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHH-HHHHHHHHHHhhh
Confidence 88889999988877778888888885 68999999999999999996 8999998877653
No 125
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.24 E-value=4.3e-10 Score=109.45 Aligned_cols=132 Identities=17% Similarity=0.241 Sum_probs=98.1
Q ss_pred HHHhcHHHHHH-HhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHH-HHHHHhc-chh
Q 017795 154 TVIDNLGQICQ-SLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFA-LLYYAIG-WPG 228 (366)
Q Consensus 154 ~~~~~l~~i~~-~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~-~~l~~~~-~~~ 228 (366)
....++|.+.. ++|++..+. ..+...++..+++++.|+++||++||+.. .++.++.++. ..++... +..
T Consensus 256 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~ 329 (405)
T TIGR00891 256 PIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAY------VCSLLAGQLLIIPVFAIGANVA 329 (405)
T ss_pred hhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhh------HHHHHHHHHHHHHHHHhCCchH
Confidence 44556777664 578887665 67788889999999999999999987654 3333333222 2222222 223
Q ss_pred HHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhh
Q 017795 229 EIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYA 292 (366)
Q Consensus 229 ~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~ 292 (366)
.+.+..++.+++.++.++..++.++|.+|++++|+++|+.+....+|+.+ +|.++|++.|..|
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~-g~~~~g~l~~~~g 392 (405)
T TIGR00891 330 VLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGAL-APIIGALLAQRLD 392 (405)
T ss_pred HHHHHHHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHH-HHHHHHHHHHhcc
Confidence 34445466677777777888899999999999999999999999999996 9999999999877
No 126
>PRK10504 putative transporter; Provisional
Probab=99.24 E-value=5.9e-10 Score=111.85 Aligned_cols=155 Identities=8% Similarity=-0.029 Sum_probs=114.3
Q ss_pred HHhhhhHHHHHHHHHHHhhhhHHHHHhcHHHHHHH-hCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHH
Q 017795 131 QALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVA 207 (366)
Q Consensus 131 ~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~-~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~ 207 (366)
+.++++.++...+..++............|++.+. +|++.... ......++..++.+++|+++||+++|+..
T Consensus 256 ~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~----- 330 (471)
T PRK10504 256 KLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVL----- 330 (471)
T ss_pred HHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHH-----
Confidence 57788888887777776666555566678888875 78887655 45555666777889999999999987654
Q ss_pred HHHHHHHHHHHHHHHHh-c--c-hhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhH
Q 017795 208 MAVAQVVMAFALLYYAI-G--W-PGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVI 283 (366)
Q Consensus 208 ~~~~~~~~~~~~~l~~~-~--~-~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i 283 (366)
..+.++.+++.+++.. . . ...+.+..++.|++.+..++.....+.+.++.+.+|.++++.+....+|..+ |+.+
T Consensus 331 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~i-g~~i 408 (471)
T PRK10504 331 -VATTLGLALVSLLFMLVALLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSI-GVTI 408 (471)
T ss_pred -HHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHH-HHHH
Confidence 4444444444443332 1 1 1223345566778877777888888889999999999999999999999996 9999
Q ss_pred HHHHhhhhh
Q 017795 284 ASGIYDYYA 292 (366)
Q Consensus 284 ~G~l~d~~~ 292 (366)
+|.+.+..+
T Consensus 409 ~g~ll~~~g 417 (471)
T PRK10504 409 AGLLLGLFG 417 (471)
T ss_pred HHHHHHHhh
Confidence 999998776
No 127
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.24 E-value=1e-09 Score=111.27 Aligned_cols=170 Identities=13% Similarity=0.065 Sum_probs=124.3
Q ss_pred HHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH-HHHHHHHHHhhhhhhhhhhhhhh-----hhhccCchhHHHHH
Q 017795 137 DFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI-YVSMISIWNFLGRVGGGYFSEAI-----VRKFAYPRPVAMAV 210 (366)
Q Consensus 137 ~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~~~~~~-~~sl~~i~~~~g~~~~G~lsD~~-----grr~~~~R~~~~~~ 210 (366)
+.+.++..++............+|.+.++.|.+..++ ..+..... .++++++|+++||+ |||+ .++..
T Consensus 13 ~~~~~~~l~~~~gl~~~~~~~~l~~~l~~~g~~~~~ig~~~~~~~~-~~~~~l~gpl~Dr~~~~~~Grrr-----~~ll~ 86 (491)
T PRK11010 13 NSAILLILGFASGLPLALTSGTLQAWMTVENIDLKTIGFFSLVGQA-YVFKFLWSPLMDRYTPPFLGRRR-----GWLLA 86 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-HHHHHHHHHHHHcccccCCCCch-----HHHHH
Confidence 3444444444444445556677899999999988776 44444433 36899999999999 6543 33456
Q ss_pred HHHHHHHHHHHHHhc----chhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHH
Q 017795 211 AQVVMAFALLYYAIG----WPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASG 286 (366)
Q Consensus 211 ~~~~~~~~~~l~~~~----~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~ 286 (366)
+++..+++...++.. +...+++..++.+++.+.......+++.|.++.++|+.+.++...+..+|..+ ++.+.++
T Consensus 87 ~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~ll-g~~l~~~ 165 (491)
T PRK11010 87 TQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLV-SGGLALW 165 (491)
T ss_pred HHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHH-HHHHHHH
Confidence 666666655554422 23356667778888888888888999999999999999999999999999996 8999999
Q ss_pred Hhhh-hhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHH
Q 017795 287 IYDY-YAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLI 345 (366)
Q Consensus 287 l~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~ 345 (366)
+.+. .+ ||..|++.+++.++..+..+.
T Consensus 166 l~~~~~G--------------------------------Wr~~f~i~a~l~ll~~l~~~~ 193 (491)
T PRK11010 166 LADRYLG--------------------------------WQGMYWLMAALLIPCIIATLL 193 (491)
T ss_pred HHhcccC--------------------------------HHHHHHHHHHHHHHHHHHHHh
Confidence 8873 34 999999999877776555443
No 128
>PTZ00207 hypothetical protein; Provisional
Probab=99.22 E-value=7.4e-10 Score=113.70 Aligned_cols=154 Identities=10% Similarity=0.058 Sum_probs=114.6
Q ss_pred HHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHhc----
Q 017795 152 GLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAIG---- 225 (366)
Q Consensus 152 ~~~~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~~---- 225 (366)
.+.+....+++.+++|++..+. ..++ .....++.+..|+++||+|+|+.+ .++.++.+++.++.+..
T Consensus 43 ~y~fsv~s~~L~~~lgls~~~l~~i~sv-g~~~g~~~lp~G~L~Dr~G~R~vl------lig~ll~~iG~ll~ala~~~~ 115 (591)
T PTZ00207 43 MYAFNLISGAMQARYNLTQRDLSTITTV-GIAVGYFLLPYSFIYDYLGPRPIF------VLSMTVFCLGTLLFALTFQEV 115 (591)
T ss_pred HHHHHHHHHHHHHHhCcCHHHHHHHHHH-HHHHHHHHHHHHHHHHHhCcHHHH------HHHHHHHHHHHHHHHHHhccc
Confidence 3455556788889999998775 3333 223334566789999999988765 77777778887776642
Q ss_pred ---chhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhhhhhhhhhhhc
Q 017795 226 ---WPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKY 302 (366)
Q Consensus 226 ---~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~~~~~~~~~~~ 302 (366)
+...++++.++.|+|.+..++....++.+.|+ ++||.+.|+......+|+.+++++..+++. .+
T Consensus 116 i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~--~~---------- 182 (591)
T PTZ00207 116 IEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS--DN---------- 182 (591)
T ss_pred ccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH--Hh----------
Confidence 45567788889999988777777788899995 788999999999999999876666666543 23
Q ss_pred cCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHH
Q 017795 303 NGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVV 347 (366)
Q Consensus 303 ~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~ 347 (366)
|+..|++++++.++.+++.+.+.
T Consensus 183 ----------------------~~~~fl~l~vl~~vv~ll~~~~v 205 (591)
T PTZ00207 183 ----------------------TSAYFFFLMSFALVVGILAIVFM 205 (591)
T ss_pred ----------------------HHHHHHHHHHHHHHHHHHHHhhe
Confidence 77788888887777666666554
No 129
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.22 E-value=8.7e-10 Score=111.92 Aligned_cols=109 Identities=17% Similarity=0.211 Sum_probs=89.6
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHh-cc------hhHHHHHHHHHHHHhhhhhh
Q 017795 174 YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAI-GW------PGEIYVTTVLVGLSYGAHWA 246 (366)
Q Consensus 174 ~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~-~~------~~~l~~~~~l~G~~~g~~~~ 246 (366)
..+...++..++.+++|+++||+|||+.+ ..+.+++.++.++.+. .+ ...+++++++.|++.|+.++
T Consensus 61 ~~~~~~ig~~ig~~~~g~l~d~~Grr~~~------~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~ 134 (502)
T TIGR00887 61 VNGSASIGTLAGQLFFGWLADKLGRKRVY------GMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYP 134 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccHHHH------HHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhH
Confidence 78888889999999999999999998765 4555555555444332 22 34678899999999999999
Q ss_pred hHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhh
Q 017795 247 IVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYD 289 (366)
Q Consensus 247 ~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d 289 (366)
..+.+++|.+|++.||.+.++......+|..+ ++.+...+..
T Consensus 135 ~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~-g~~~~~~~~~ 176 (502)
T TIGR00887 135 LSAIITSEFATKKWRGAMMAAVFAMQGFGILA-GAIVALIVLA 176 (502)
T ss_pred HHHHHHHHhcChhhHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 99999999999999999999999999999985 8888776554
No 130
>PRK15075 citrate-proton symporter; Provisional
Probab=99.21 E-value=5.8e-10 Score=111.01 Aligned_cols=144 Identities=14% Similarity=0.073 Sum_probs=106.5
Q ss_pred HHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH---HHHHH-----HHHHhhhhhhhhhhhhhhhhhccCchhHHHH
Q 017795 138 FLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI---YVSMI-----SIWNFLGRVGGGYFSEAIVRKFAYPRPVAMA 209 (366)
Q Consensus 138 ~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~~~~~~---~~sl~-----~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~ 209 (366)
...++++.++.......+....|++.++++.++.+. ..+.. .+...+|.++.|+++||+|||+.+ .
T Consensus 17 ~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l------~ 90 (434)
T PRK15075 17 ILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGL------I 90 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHH------H
Confidence 344556666777777778888999999998766442 22222 222246788899999999998765 5
Q ss_pred HHHHHHHHHHHHHHhc-chh--------HHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhh
Q 017795 210 VAQVVMAFALLYYAIG-WPG--------EIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFS 280 (366)
Q Consensus 210 ~~~~~~~~~~~l~~~~-~~~--------~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~g 280 (366)
.+.++.+++.++.+.. +.. .+++++++.|++.|..++....+++|.+|+++|+...++......+|..+ +
T Consensus 91 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~-g 169 (434)
T PRK15075 91 VTLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVF-A 169 (434)
T ss_pred HHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHH-H
Confidence 6666666666665533 322 35778999999999888888899999999999999999998888888775 7
Q ss_pred hhHHHHHh
Q 017795 281 GVIASGIY 288 (366)
Q Consensus 281 p~i~G~l~ 288 (366)
+.+++.+.
T Consensus 170 ~~~g~~l~ 177 (434)
T PRK15075 170 ALLGYLLN 177 (434)
T ss_pred HHHHHHHH
Confidence 77766654
No 131
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.21 E-value=1.1e-09 Score=106.56 Aligned_cols=180 Identities=17% Similarity=0.238 Sum_probs=132.7
Q ss_pred CHHHHhhhhHHHHHHHHHHHhhhhHHHHHhcHHHHHHH-hCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCch
Q 017795 128 TLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPR 204 (366)
Q Consensus 128 ~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~-~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R 204 (366)
+..+.++++..|..++..++.....++...++.++.++ .|++.+.. ....++++.++|..++|+++|| +.|+..
T Consensus 203 ~~~~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l-- 279 (394)
T COG2814 203 TLLRLLRRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRAL-- 279 (394)
T ss_pred HHHHHhcCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHH--
Confidence 46788999999999888888877777666666666655 68877665 7888899999999999999999 554333
Q ss_pred hHHHHHHHHHHHHHHHHHH--hcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhh
Q 017795 205 PVAMAVAQVVMAFALLYYA--IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGV 282 (366)
Q Consensus 205 ~~~~~~~~~~~~~~~~l~~--~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~ 282 (366)
.....++++..+.+. ..+.....+..++.|+..+..........++ ..++....+.++...+.++|-.+ |..
T Consensus 280 ----~~~~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~-GA~ 353 (394)
T COG2814 280 ----IAALLLLALALLALTFTGASPALALALLFLWGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIAL-GAA 353 (394)
T ss_pred ----HHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHH-HHH
Confidence 344444444444433 2334444555555666665555555555566 55788999999999999999996 999
Q ss_pred HHHHHhhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHHh
Q 017795 283 IASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVH 348 (366)
Q Consensus 283 i~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~ 348 (366)
++|.++|+.| |....++.+.+.+++.++.++..+
T Consensus 354 lGG~v~~~~g--------------------------------~~~~~~~~a~l~~~a~~~~~~~~~ 387 (394)
T COG2814 354 LGGLVLDALG--------------------------------YAATGWVGAALLLLALLLALLSAR 387 (394)
T ss_pred HHHHHHHhhc--------------------------------hHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999977 999999999888887777665443
No 132
>TIGR00898 2A0119 cation transport protein.
Probab=99.21 E-value=8.6e-11 Score=118.94 Aligned_cols=145 Identities=17% Similarity=0.132 Sum_probs=115.9
Q ss_pred hcHHHHHHHhCCC---hhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH-hcchhHH
Q 017795 157 DNLGQICQSLGYA---DTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IGWPGEI 230 (366)
Q Consensus 157 ~~l~~i~~~~g~~---~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~-~~~~~~l 230 (366)
...+.+.++++.+ .... ..+++.++..+|.+++|+++||+|||+.+ .++.++.+++.++.+ ..+...+
T Consensus 110 ~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~------~~~~~~~~i~~~~~~~~~~~~~~ 183 (505)
T TIGR00898 110 TFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVL------LLSTLVTAVSGVLTAFSPNYTVF 183 (505)
T ss_pred cccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHH------HHHHHHHHHHHHHHHHcccHHHH
Confidence 3456777888886 4443 78889999999999999999999998655 556666666655554 4556678
Q ss_pred HHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhhhhhhhhhhhccCCCCCcc
Q 017795 231 YVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVS 310 (366)
Q Consensus 231 ~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~~~~~~~~~~~~~~~~~~~ 310 (366)
++++++.|++.++.++...++++|.++.++|+.+.++...+..+|..+ +|.+++.+. +
T Consensus 184 ~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~-~~~~~~~~~---~------------------ 241 (505)
T TIGR00898 184 LVFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVL-LPLVAYFIP---D------------------ 241 (505)
T ss_pred HHHHHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHH-HHHHHHHhh---H------------------
Confidence 889999999999999999999999999999999999998888888885 787765542 2
Q ss_pred cCCCCCCcccCCcchHHHHHHHHHHHHHHHHHH
Q 017795 311 FRDQETPTCLGSICYSITCGIMAGLCIIAMVMS 343 (366)
Q Consensus 311 ~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~ 343 (366)
||+.|++.++.+++..+..
T Consensus 242 --------------wr~~~~~~~i~~~~~~~~~ 260 (505)
T TIGR00898 242 --------------WRWLQLAVSLPTFLFFLLS 260 (505)
T ss_pred --------------HHHHHHHHHHHHHHHHHHH
Confidence 9999998887777665555
No 133
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.20 E-value=7e-10 Score=109.99 Aligned_cols=161 Identities=10% Similarity=0.042 Sum_probs=125.5
Q ss_pred HHhcHHHHHHHhCCChhH-H--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH-hcchhHH
Q 017795 155 VIDNLGQICQSLGYADTS-I--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IGWPGEI 230 (366)
Q Consensus 155 ~~~~l~~i~~~~g~~~~~-~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~-~~~~~~l 230 (366)
.....|++.+++|++..+ . ..+.+..+..+..+.+|+++||+|-|+.+ ..+.+.-.+..++.. ..+...+
T Consensus 45 ~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL------~l~~l~Wsl~t~L~~fa~Sl~~L 118 (511)
T TIGR00806 45 ESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVL------VLQALSFVCVWLLLLLGTSVWHM 118 (511)
T ss_pred HHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHH------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 334567788899999888 4 78888889999999999999999987655 555555555555544 3356678
Q ss_pred HHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhhhhhhhhhhhccCCCCCcc
Q 017795 231 YVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVS 310 (366)
Q Consensus 231 ~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~~~~~~~~~~~~~~~~~~~ 310 (366)
.+..++.|++-|+.+ ....++...||+++|+++.++.+.+..+|.++ ++++++++. ..+.+
T Consensus 119 ~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~I-a~~L~qll~-s~gWr---------------- 179 (511)
T TIGR00806 119 QLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFL-SSVLGQLLV-TLGWI---------------- 179 (511)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH-hcCch----------------
Confidence 899999999999998 88889999999999999999999999999997 899988843 34411
Q ss_pred cCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHHhhcHHH
Q 017795 311 FRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHRTKSV 353 (366)
Q Consensus 311 ~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~~r~~ 353 (366)
.|+...+|..+...+++++++++....|..
T Consensus 180 -------------~y~~Ln~Isl~s~~~a~~~a~~LP~~~~sl 209 (511)
T TIGR00806 180 -------------SYSTLNIISLVFMTFSVFLALFLKRPKRSL 209 (511)
T ss_pred -------------hHHHHHHHHHHHHHHHHHHHHhCCCCchhh
Confidence 266667777777777777777776555543
No 134
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.20 E-value=9.6e-11 Score=122.16 Aligned_cols=133 Identities=14% Similarity=0.110 Sum_probs=111.2
Q ss_pred HHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHhcc---
Q 017795 152 GLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAIGW--- 226 (366)
Q Consensus 152 ~~~~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~~~--- 226 (366)
...+...++++.+++++++.+. +.+.+.++..++.++.|++.||++||+.+ .++.++++++.++++..+
T Consensus 49 ~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i------~~g~ll~~lg~ll~alphf~~ 122 (633)
T TIGR00805 49 NGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVI------GIGCAIMGLGSFLLSLPHFLS 122 (633)
T ss_pred HHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEE------EecHHHHHHHHHHHhChHHhc
Confidence 3345566888889999988776 88899999999999999999999998876 667777777766654221
Q ss_pred -------------------------------------------------hhHHHHHHHHHHHHhhhhhhhHHHHHHHhhC
Q 017795 227 -------------------------------------------------PGEIYVTTVLVGLSYGAHWAIVPAAASELFG 257 (366)
Q Consensus 227 -------------------------------------------------~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~ 257 (366)
...++++.++.|+|.+..+++..+++.|.++
T Consensus 123 ~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~ 202 (633)
T TIGR00805 123 GRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAK 202 (633)
T ss_pred CCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCC
Confidence 1245678999999999999999999999999
Q ss_pred CCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhh
Q 017795 258 LKSFGALYNFLTLASPAGSLIFSGVIASGIYDYY 291 (366)
Q Consensus 258 ~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~ 291 (366)
+++++...++.+....+|..+ |+.++|++.+.+
T Consensus 203 ~~~~~~~~~i~~~~~~iG~~l-G~llgg~l~~~~ 235 (633)
T TIGR00805 203 SKNSPLYIGILESIAVFGPAF-GYLLGSFCLQIY 235 (633)
T ss_pred ccccHHHHHHHHHHHHhhhHH-HHHHHHHHHhcc
Confidence 999999999999999999996 999999988654
No 135
>PRK10133 L-fucose transporter; Provisional
Probab=99.20 E-value=1.7e-09 Score=108.17 Aligned_cols=145 Identities=15% Similarity=0.047 Sum_probs=115.0
Q ss_pred HHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHH
Q 017795 137 DFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVV 214 (366)
Q Consensus 137 ~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~ 214 (366)
.++++++.++............+|++.+++|.+..+. ..+.+.++..++.+..|+++||+|||+.. ..+.++
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l------~~g~~~ 100 (438)
T PRK10133 27 PFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGI------ITGLFL 100 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH------HHHHHH
Confidence 4556666666655666667778999988999988776 78888999999999999999999998766 677777
Q ss_pred HHHHHHHH---H-hcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHh
Q 017795 215 MAFALLYY---A-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIY 288 (366)
Q Consensus 215 ~~~~~~l~---~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~ 288 (366)
.+++.+++ . ..+...+++++++.|+|.|...+.....+.|..+.++++...++......+|..+ ||.+++.+.
T Consensus 101 ~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~-g~~~g~~l~ 177 (438)
T PRK10133 101 YALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAII-AVVFGQSLI 177 (438)
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 77776654 2 3455677889999999999999999998888766666666788999999999996 888877654
No 136
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.19 E-value=5.6e-10 Score=123.97 Aligned_cols=159 Identities=9% Similarity=0.056 Sum_probs=108.8
Q ss_pred HHhhhhHHHHHHHHHHHhhhhHHHHHhcHHH-----HHHHhCCChhHH---HHHHHHHHHhhhhhhhhhhhhhhhhhccC
Q 017795 131 QALMKADFLLLFFSLVLASGSGLTVIDNLGQ-----ICQSLGYADTSI---YVSMISIWNFLGRVGGGYFSEAIVRKFAY 202 (366)
Q Consensus 131 ~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~-----i~~~~g~~~~~~---~~sl~~i~~~~g~~~~G~lsD~~grr~~~ 202 (366)
..+++.+|+.+++..+++..........++. +..+.+.+.... ..+++.+...+..+++|+++||++||+.+
T Consensus 6 ~l~~~~~f~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~ 85 (1140)
T PRK06814 6 YLMKSRRFAPLFWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLA 85 (1140)
T ss_pred hhhhccccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHH
Confidence 3556667777666666655443322222221 112222222221 45566777888999999999999998643
Q ss_pred chhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhh
Q 017795 203 PRPVAMAVAQVVMAFALLYYAIGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGV 282 (366)
Q Consensus 203 ~R~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~ 282 (366)
. ....+..+++..+.+.+...+...+++++++.|++.+..++...+++.++++.++++.++++.+++..+|.++ ||.
T Consensus 86 ~--~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~i-gp~ 162 (1140)
T PRK06814 86 K--ILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILL-GTI 162 (1140)
T ss_pred H--HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHH-HHH
Confidence 1 1111222222222222233566788899999999999989999999999999999999999999999999996 999
Q ss_pred HHHHHhhhhh
Q 017795 283 IASGIYDYYA 292 (366)
Q Consensus 283 i~G~l~d~~~ 292 (366)
++|++.+..+
T Consensus 163 l~g~l~~~~~ 172 (1140)
T PRK06814 163 IGGLATISGN 172 (1140)
T ss_pred HHHHHHhccc
Confidence 9999998766
No 137
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.19 E-value=2e-09 Score=102.37 Aligned_cols=180 Identities=13% Similarity=0.051 Sum_probs=132.0
Q ss_pred CHHHHhhhhHHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchh
Q 017795 128 TLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRP 205 (366)
Q Consensus 128 ~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~ 205 (366)
+-...++++.-|.+.+.+.......+....|+|+|..|.|++..++ .+++..+......++.-.+.+|... .|+
T Consensus 200 ~~~~vw~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n----~r~ 275 (395)
T COG2807 200 SVRKVWRSPLAWQVTLFMGLQSLLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKN----QRP 275 (395)
T ss_pred cccccccCchhHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcc----cch
Confidence 3345789999999988888888889999999999999999998877 8999999999999999989887422 222
Q ss_pred HHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCC-CchhhHHHHHHhHhhhhHHHhhhhHH
Q 017795 206 VAMAVAQVVMAFALLYYAIGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGL-KSFGALYNFLTLASPAGSLIFSGVIA 284 (366)
Q Consensus 206 ~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~-~~~g~~~g~~~~~~~~G~~i~gp~i~ 284 (366)
.. .....++.+|.+-+........+...++.|+|.|+.+++.-..+.+.... +..+...|+....+.+=+.+ ||.+.
T Consensus 276 ~~-~~~~~~~l~G~~G~~~~P~~~~~lw~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~-GP~l~ 353 (395)
T COG2807 276 LV-VLALLLMLVGLVGLLLAPGQLPILWALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAF-GPWLF 353 (395)
T ss_pred HH-HHHHHHHHHHHHHHHHhhhhHHHHHHHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhh-hhhhH
Confidence 22 33333333333332221112222336899999999999999988887654 44667777777777777774 99999
Q ss_pred HHHhhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHH
Q 017795 285 SGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSL 344 (366)
Q Consensus 285 G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~ 344 (366)
|++.|.+| +|...++..+.+.++..+..+
T Consensus 354 G~lhDa~g-------------------------------sw~~~~~~l~~~~i~m~i~Gl 382 (395)
T COG2807 354 GFLHDATG-------------------------------SWSAPLVLLALATLLMLIFGL 382 (395)
T ss_pred hHHHHhcC-------------------------------ChHHHHHHHHHHHHHHHHHHh
Confidence 99999998 599998877766555444443
No 138
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.18 E-value=1.6e-09 Score=106.39 Aligned_cols=176 Identities=11% Similarity=0.028 Sum_probs=110.9
Q ss_pred hhHHHHHHHHHHHhhhhHHHHHhcHHHH-HHHhCCChhHH--HHHHHHH-HHhhhhhhhhhhhhhhhhhccCchhHHHHH
Q 017795 135 KADFLLLFFSLVLASGSGLTVIDNLGQI-CQSLGYADTSI--YVSMISI-WNFLGRVGGGYFSEAIVRKFAYPRPVAMAV 210 (366)
Q Consensus 135 ~~~~~ll~~~~~~~~~~~~~~~~~l~~i-~~~~g~~~~~~--~~sl~~i-~~~~g~~~~G~lsD~~grr~~~~R~~~~~~ 210 (366)
+...|.+++..++...........+|.+ .+++|.+.++. ..+...+ +..++.+.+|+ +||+|||+.. +..
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~-----~~~ 87 (393)
T PRK15011 14 DLTSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSL-----IVF 87 (393)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHH-----HHH
Confidence 4456666666666666555556666665 46789988776 3344444 44455555666 9999987643 133
Q ss_pred HHHHHHHHHHHHHh-cchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCch--hhHHHHHHhHhhhhHHHhhhhHHHHH
Q 017795 211 AQVVMAFALLYYAI-GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSF--GALYNFLTLASPAGSLIFSGVIASGI 287 (366)
Q Consensus 211 ~~~~~~~~~~l~~~-~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~--g~~~g~~~~~~~~G~~i~gp~i~G~l 287 (366)
+.++.+++..+++. .+...+++...+.+...+...+....++.+..+.+.+ +...++.+.+..+|..+ ||.++|++
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~-g~~i~~~l 166 (393)
T PRK15011 88 CCLLGVLACTLFAWNRNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVI-GPPLAYAL 166 (393)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHH-hhHHHHHH
Confidence 33444444444443 2333333343344333344556666677776665544 33447788889999996 99999999
Q ss_pred hhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHHhh
Q 017795 288 YDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHR 349 (366)
Q Consensus 288 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~ 349 (366)
.+..+ ||..|++.++++++.++..++..++
T Consensus 167 ~~~~g--------------------------------w~~~f~~~~~~~~~~~~~~~~~~~~ 196 (393)
T PRK15011 167 AMGFS--------------------------------FTVMYLSAAVAFIVCGVMVWLFLPS 196 (393)
T ss_pred HHhcC--------------------------------hHHHHHHHHHHHHHHHHHHHhhcCc
Confidence 98777 9999999988777766665554443
No 139
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.17 E-value=3.4e-09 Score=104.35 Aligned_cols=157 Identities=8% Similarity=0.030 Sum_probs=106.1
Q ss_pred CHHHHhhhhHHHHHHHHHHHhhhhHHHHHhcH-HHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCch
Q 017795 128 TLPQALMKADFLLLFFSLVLASGSGLTVIDNL-GQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPR 204 (366)
Q Consensus 128 ~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l-~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R 204 (366)
+.++.++++.+|...+..++..........++ |.+.+++|++.... ..+...++..+|+++.|++.||.+++
T Consensus 208 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~~----- 282 (394)
T PRK10213 208 NTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVKL----- 282 (394)
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccchh-----
Confidence 35678889999887666555554444444454 66777889887654 56667778888888888888874322
Q ss_pred hHHHHHHHHHHHHHHHHHH-hcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhH
Q 017795 205 PVAMAVAQVVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVI 283 (366)
Q Consensus 205 ~~~~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i 283 (366)
.......+..+.+.++.. ..+...+++..++.|++.+...+...+.+.+..+ ++.+...++......+|..+ ||.+
T Consensus 283 -~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~-G~~l 359 (394)
T PRK10213 283 -ALAGAPLVLAVSALVLTLWGSDKIVATGVAIIWGLTFALVPVGWSTWITRSLA-DQAEKAGSIQVAVIQLANTC-GAAI 359 (394)
T ss_pred -HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHH-HHHH
Confidence 111222222333333322 3344556667778898888877777777777775 55667777777777889886 9999
Q ss_pred HHHHhhhhh
Q 017795 284 ASGIYDYYA 292 (366)
Q Consensus 284 ~G~l~d~~~ 292 (366)
+|+++|..+
T Consensus 360 ~G~l~~~~g 368 (394)
T PRK10213 360 GGYALDNIG 368 (394)
T ss_pred HHHHHhccC
Confidence 999999877
No 140
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.17 E-value=1e-10 Score=112.09 Aligned_cols=139 Identities=16% Similarity=0.170 Sum_probs=124.5
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHhcc-hhHHHHHHHHHHHHhhhhhhhHHHHH
Q 017795 174 YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAIGW-PGEIYVTTVLVGLSYGAHWAIVPAAA 252 (366)
Q Consensus 174 ~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~~~-~~~l~~~~~l~G~~~g~~~~~~~~~~ 252 (366)
+.+...+.+.+..++.|.+.||+|+|..+ .+++.++....+++++.+ ...+++++.+.|+|.+..++...+++
T Consensus 111 LFaskA~~qllvnp~~G~l~~~iGy~ipm------~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~tsglaml 184 (464)
T KOG3764|consen 111 LFASKALVQLLVNPFFGNLIDRIGYKIPM------VAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTSGLAML 184 (464)
T ss_pred HHHHHHHHHHHhcccchhhHHHhccccHH------HHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhhhHHHH
Confidence 77888899999999999999999998655 899999999999998654 45788999999999999999999999
Q ss_pred HHhhCCCc-hhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHH
Q 017795 253 SELFGLKS-FGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGI 331 (366)
Q Consensus 253 se~f~~~~-~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i 331 (366)
+|.|+.++ ||.++|+...+..+|-.+ ||+.+|.+||..| +...|++
T Consensus 185 Ad~f~~d~er~~vmGialgfislG~lv-gPpfGGilYe~~G--------------------------------k~aPFlV 231 (464)
T KOG3764|consen 185 ADVFPEDNERGSVMGIALGFISLGVLV-GPPFGGILYEFAG--------------------------------KSAPFLV 231 (464)
T ss_pred HHHcccchhhhHHHHHHHHHHhcccee-cCCcccchHhhcC--------------------------------CcCcHHH
Confidence 99999876 799999999999999997 9999999999888 8999999
Q ss_pred HHHHHHHHHHHHHHHHhhcH
Q 017795 332 MAGLCIIAMVMSLIVVHRTK 351 (366)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~r 351 (366)
+++++++..++-+++...++
T Consensus 232 L~~v~Lld~~L~l~vi~p~~ 251 (464)
T KOG3764|consen 232 LAIVLLLDGALQLLVIEPTE 251 (464)
T ss_pred HHHHHHHHHHHHHheeCccc
Confidence 99999998888887766543
No 141
>PRK10054 putative transporter; Provisional
Probab=99.16 E-value=5.5e-10 Score=109.98 Aligned_cols=156 Identities=9% Similarity=-0.050 Sum_probs=105.4
Q ss_pred HHHHhhhhHHHHHHHHHHHhhhhHHHHHhcHHHHHHH---hCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCc
Q 017795 129 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS---LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYP 203 (366)
Q Consensus 129 ~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~---~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~ 203 (366)
.++.++++.+|.+.+..++.......+..+++.+... .+.+.... ..+...+.....++..|.++||.++|+..
T Consensus 199 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l- 277 (395)
T PRK10054 199 PSVLLQDKALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLM- 277 (395)
T ss_pred hhhhccCceehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHH-
Confidence 3567788888877766666555544454566666543 23333322 44444445555667778888988776543
Q ss_pred hhHHHHHHHHHHHHHHHHHHh--cchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhh
Q 017795 204 RPVAMAVAQVVMAFALLYYAI--GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSG 281 (366)
Q Consensus 204 R~~~~~~~~~~~~~~~~l~~~--~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp 281 (366)
..+.++.+++...+.. .+...+++..++.|+|.+...+...+.+.+..+++.+++.++..+ ...+|..+ ||
T Consensus 278 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~-Gp 350 (395)
T PRK10054 278 -----TAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAI-NP 350 (395)
T ss_pred -----HHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCcccceehHhHHH-HHHHHHHH-HH
Confidence 5555666666555543 233345567778888887777777788889999889999988765 45588886 99
Q ss_pred hHHHHHhhhhh
Q 017795 282 VIASGIYDYYA 292 (366)
Q Consensus 282 ~i~G~l~d~~~ 292 (366)
.++|.++|..+
T Consensus 351 ~~~G~l~~~~g 361 (395)
T PRK10054 351 LVSGVILTTLP 361 (395)
T ss_pred HHHHHHHHHcC
Confidence 99999999887
No 142
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.16 E-value=1.6e-09 Score=106.07 Aligned_cols=147 Identities=16% Similarity=0.147 Sum_probs=105.1
Q ss_pred HHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHH
Q 017795 139 LLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMA 216 (366)
Q Consensus 139 ~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~ 216 (366)
+.+.+.+++.......+...+|.+.+++|++..++ ..+...+...++.+++|+++||++|+... ++.. ..+..+..
T Consensus 7 ~~l~~~~~~~~~~~~~~~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~-~~~~-~~~~~l~~ 84 (382)
T TIGR00902 7 RWLALGFFGYFCAYGIFLPFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIA-LRLL-ALASAIFA 84 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHH-HHHH-HHHHHHHH
Confidence 33445555555555556778999999999998877 77888899999999999999999875432 1111 11222222
Q ss_pred HHHHHHH-hcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhh
Q 017795 217 FALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYA 292 (366)
Q Consensus 217 ~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~ 292 (366)
+ .+.. ..+.+.+++..++.+.+.+...+...+++.+ + .++++..+|.......+|..+ +|.++|++.+..+
T Consensus 85 ~--~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~-~-~~~~~~~~g~~~~~~slG~~~-g~~l~g~l~~~~g 156 (382)
T TIGR00902 85 A--AFSAGAHNAWLLFIAIGLFALFFSAGMPIGDALANT-W-QKQFGLDYGKVRLIGSAAFII-GSALFGGLIGMFD 156 (382)
T ss_pred H--HHHHhhhhHHHHHHHHHHHHHHHccchhHHHHHHHH-H-HHHcCCCccHHHHHHHHHHHH-HHHHHHHHHHHcC
Confidence 1 1222 3445566677777888877777777776655 3 577899999999999999996 9999999999887
No 143
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.15 E-value=9.5e-10 Score=121.96 Aligned_cols=152 Identities=14% Similarity=0.135 Sum_probs=110.3
Q ss_pred HhhhhHHHHHHHHHHHhhhhHHHHHhc-HHHHHHHhCCChhHH----HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhH
Q 017795 132 ALMKADFLLLFFSLVLASGSGLTVIDN-LGQICQSLGYADTSI----YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPV 206 (366)
Q Consensus 132 ~l~~~~~~ll~~~~~~~~~~~~~~~~~-l~~i~~~~g~~~~~~----~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~ 206 (366)
.+++..|+.++++.++.......+... .+.+..+++.+.... ..+++.+...++.+++|+++||+|||+.+
T Consensus 5 ~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l---- 80 (1146)
T PRK08633 5 LLKIIGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVI---- 80 (1146)
T ss_pred hhhhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHH----
Confidence 456677777777766655444333333 333445566554332 56777888889999999999999998755
Q ss_pred HHHHHHHHHHHHHH---HH-HhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhh
Q 017795 207 AMAVAQVVMAFALL---YY-AIGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGV 282 (366)
Q Consensus 207 ~~~~~~~~~~~~~~---l~-~~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~ 282 (366)
..+.++.++..+ +. ...+...++++.++.|++.+...+...++++|+++.++++.++++..++..+|..+ ||.
T Consensus 81 --~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~l-g~~ 157 (1146)
T PRK08633 81 --RIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILA-GTA 157 (1146)
T ss_pred --HHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHH-HHH
Confidence 333322222211 11 13455678888999999999988999999999999999999999999999999996 999
Q ss_pred HHHHHhhh
Q 017795 283 IASGIYDY 290 (366)
Q Consensus 283 i~G~l~d~ 290 (366)
++|++.+.
T Consensus 158 l~~~l~~~ 165 (1146)
T PRK08633 158 LFSFLFES 165 (1146)
T ss_pred HHHHHHHh
Confidence 99999876
No 144
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.15 E-value=4.8e-10 Score=110.65 Aligned_cols=170 Identities=21% Similarity=0.303 Sum_probs=132.5
Q ss_pred HHHHHHHHHHhhhhHHHHHhcHHHHH-HH----hCCChhHH--HHHHHHHHHhhhhhhhhhhhhhh-hhhccCchhHHHH
Q 017795 138 FLLLFFSLVLASGSGLTVIDNLGQIC-QS----LGYADTSI--YVSMISIWNFLGRVGGGYFSEAI-VRKFAYPRPVAMA 209 (366)
Q Consensus 138 ~~ll~~~~~~~~~~~~~~~~~l~~i~-~~----~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~-grr~~~~R~~~~~ 209 (366)
+|+++..=++=-++.+++-..+-.++ .+ +|++++++ ..+.+...-.+..+++||++||+ |+|+.+ +
T Consensus 23 l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI------~ 96 (498)
T COG3104 23 LYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTI------V 96 (498)
T ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHH------H
Confidence 45555554444444444433333333 23 45888776 77888888888999999999996 887776 8
Q ss_pred HHHHHHHHHHHHHHhc---chhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCc--hhhHHHHHHhHhhhhHHHhhhhHH
Q 017795 210 VAQVVMAFALLYYAIG---WPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKS--FGALYNFLTLASPAGSLIFSGVIA 284 (366)
Q Consensus 210 ~~~~~~~~~~~l~~~~---~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~--~g~~~g~~~~~~~~G~~i~gp~i~ 284 (366)
.+.+++.+|+++++.. .+..++++.+++++|.|..-+...+++.|.++++. +-..+++..++.++|+++ +|++.
T Consensus 97 lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~-~p~i~ 175 (498)
T COG3104 97 LGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLI-APIIT 175 (498)
T ss_pred HHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHH-HHHHH
Confidence 8999999999998854 46789999999999999999999999999999764 778889999999999996 99999
Q ss_pred HHHhhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHH
Q 017795 285 SGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIV 346 (366)
Q Consensus 285 G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~ 346 (366)
+++.+.++ |...|.+.++-..++.+..++.
T Consensus 176 ~~~~~~~g--------------------------------~~~gF~~aavGm~~gl~~f~~~ 205 (498)
T COG3104 176 GLLAINYG--------------------------------WHVGFGLAAVGMIIGLVIFLLG 205 (498)
T ss_pred HHHHHhhC--------------------------------HHHHHHHHHHHHHHHHHHHHHc
Confidence 99999887 9999988877666665555443
No 145
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.15 E-value=3e-09 Score=104.69 Aligned_cols=156 Identities=13% Similarity=-0.106 Sum_probs=107.5
Q ss_pred HHHHhhhhHHHHHHHHHHHhhhhHHHHHhcHHHHH-HHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchh
Q 017795 129 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQIC-QSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRP 205 (366)
Q Consensus 129 ~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~-~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~ 205 (366)
+++.++++.+|...+..++............|.+. +++|++..+. ......++..+|+++.|+++||+++|+..
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~--- 284 (406)
T PRK15402 208 YKLVLKNRRFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLI--- 284 (406)
T ss_pred HHHHHcCcHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHH---
Confidence 35567888888877666555444444555567765 4578887654 34445567788999999999999886544
Q ss_pred HHHHHHHHHHHHHHHHHHh------cchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHh
Q 017795 206 VAMAVAQVVMAFALLYYAI------GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIF 279 (366)
Q Consensus 206 ~~~~~~~~~~~~~~~l~~~------~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~ 279 (366)
.++.++++++.+++.. .+...+++..++.|++.+...+........ -.++++|+..+..++...+|..+
T Consensus 285 ---~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~- 359 (406)
T PRK15402 285 ---RMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAFGIGLANAGLYRLTLF-SSDVSKGTVSAAMGMLSMLIFTV- 359 (406)
T ss_pred ---HHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHhhhHHHHHhh-hccccccHHHHHHHHHHHHHHHH-
Confidence 4455555554444331 122345566777888887766655544433 33478999999999999999986
Q ss_pred hhhHHHHHhhhhh
Q 017795 280 SGVIASGIYDYYA 292 (366)
Q Consensus 280 gp~i~G~l~d~~~ 292 (366)
|+.++|.+++..+
T Consensus 360 g~~~~~~l~~~~~ 372 (406)
T PRK15402 360 GIELSKHAYLGGG 372 (406)
T ss_pred HHHHHHhcccCCc
Confidence 9999999998776
No 146
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.14 E-value=2.6e-09 Score=105.19 Aligned_cols=153 Identities=17% Similarity=0.100 Sum_probs=112.9
Q ss_pred hHHHHHhcHHHHHHHhCCChhHH-HHHHHHHHHhhhhhhhhhhhhhh-----hhhccCchhHHHHHHHHHHHHHHHHHHh
Q 017795 151 SGLTVIDNLGQICQSLGYADTSI-YVSMISIWNFLGRVGGGYFSEAI-----VRKFAYPRPVAMAVAQVVMAFALLYYAI 224 (366)
Q Consensus 151 ~~~~~~~~l~~i~~~~g~~~~~~-~~sl~~i~~~~g~~~~G~lsD~~-----grr~~~~R~~~~~~~~~~~~~~~~l~~~ 224 (366)
........+|.+.++.|++.+++ ..+....- .+..+++|+++||+ |||+. ++.++.++++++...+..
T Consensus 14 ~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~-~~~~~l~g~~~Dr~~~~~~g~rr~-----~l~~~~~~~~l~~~~l~~ 87 (402)
T PRK11902 14 PLALTSGTLQAWMTVEGLDIQTIGFFSLVGQA-YIFKFLWAPLMDRYTPPLLGRRRG-----WLLLTQVGLAASIAAMAF 87 (402)
T ss_pred hHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH-HHHHHHHHHHHHcccccCCCcchh-----HHHHHHHHHHHHHHHHHh
Confidence 33345567899999999999888 44444333 68899999999999 66432 335556666555555443
Q ss_pred c----chhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhh-hhhhhhhh
Q 017795 225 G----WPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYY-AEKQAGLL 299 (366)
Q Consensus 225 ~----~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~-~~~~~~~~ 299 (366)
. +...+++..++.+++.+...+...++++|.+++++++.+.++...+..+|..+ ++.+++.+.+.. +
T Consensus 88 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~-g~~l~~~l~~~~~g------- 159 (402)
T PRK11902 88 CPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLV-SGGLALWLADRVLG------- 159 (402)
T ss_pred cCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHH-HhHHHHHHHhcccC-------
Confidence 2 12334555556677777777888899999999999999999999999999996 888899888754 4
Q ss_pred hhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHH
Q 017795 300 WKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVM 342 (366)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~ 342 (366)
|+..|++.+++.++..+.
T Consensus 160 -------------------------w~~~f~i~a~~~l~~~l~ 177 (402)
T PRK11902 160 -------------------------WGNTYLLMAGLMLAGALT 177 (402)
T ss_pred -------------------------HHHHHHHHHHHHHHHHHH
Confidence 999999988877665544
No 147
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.13 E-value=3.2e-09 Score=104.67 Aligned_cols=158 Identities=10% Similarity=0.097 Sum_probs=102.5
Q ss_pred CHHHHhhhhHHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhh-hhhhccCch
Q 017795 128 TLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEA-IVRKFAYPR 204 (366)
Q Consensus 128 ~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~-~grr~~~~R 204 (366)
++++.++++.++...+..+...........++|.+.++.+.++... ..++..+...++....+.+.|+ ++.++
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~---- 275 (400)
T PRK11646 200 GMTRVLRDKRFVTYVLTLTGYYMLAVQVMLMLPIMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEH---- 275 (400)
T ss_pred HHHHHHcCchHHHHHHHHHHHHHHHHHHHHhhhhhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhH----
Confidence 4566778888876555444333333334567888888876555443 3444444444444334444443 33221
Q ss_pred hHHHHHHHHHHHHHHHHHH-hcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhH
Q 017795 205 PVAMAVAQVVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVI 283 (366)
Q Consensus 205 ~~~~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i 283 (366)
.+..+.++.+++.+++. ..+...+.+..++.+++.+...+...+++.+..|++.+|+.+|+.+....+|..+ ||.+
T Consensus 276 --~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~i-g~~l 352 (400)
T PRK11646 276 --RLMAGLLIMSLSMFPIGMVSNLQQLFTLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAI-GYIG 352 (400)
T ss_pred --HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHh-cccc
Confidence 12445555555555544 3333444455567778877777778889999999999999999999999999996 9999
Q ss_pred HHHHhhhhh
Q 017795 284 ASGIYDYYA 292 (366)
Q Consensus 284 ~G~l~d~~~ 292 (366)
+|+++|..+
T Consensus 353 ~G~l~~~~~ 361 (400)
T PRK11646 353 GGWLFDLGK 361 (400)
T ss_pred hHHHHHHHh
Confidence 999999865
No 148
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.12 E-value=1.7e-09 Score=105.79 Aligned_cols=133 Identities=14% Similarity=0.134 Sum_probs=97.6
Q ss_pred HHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH-hcchhH
Q 017795 153 LTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IGWPGE 229 (366)
Q Consensus 153 ~~~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~-~~~~~~ 229 (366)
..+...+|.+.+++|.+...+ .+++..+...++.+++|+++||++|+....|.. .. ...+.. ..... ..+.+.
T Consensus 21 g~~~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~-~~-~~~~~~--~~~~~~~~~~~~ 96 (382)
T PRK11128 21 GVFLPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLL-AL-LTLLFA--VAFWFGAHSFWL 96 (382)
T ss_pred HHHhhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHH-HH-HHHHHH--HHHHHhcccHHH
Confidence 446677889999999988776 888889999999999999999999854332221 11 111111 11222 244556
Q ss_pred HHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhh
Q 017795 230 IYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYA 292 (366)
Q Consensus 230 l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~ 292 (366)
+++..++.|++.+...+...+++.+. .++++.+++.......+|..+ ||.++|++.+..+
T Consensus 97 l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~i-gp~lgg~l~~~~g 156 (382)
T PRK11128 97 LFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVI-GSALTGKLVSWFG 156 (382)
T ss_pred HHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHH-HHHHHHHHHHHcC
Confidence 66778888888888778777776665 456788888888888999996 9999999999887
No 149
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.12 E-value=4.4e-09 Score=106.04 Aligned_cols=155 Identities=10% Similarity=0.059 Sum_probs=103.5
Q ss_pred HHhhhhHHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHH
Q 017795 131 QALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAM 208 (366)
Q Consensus 131 ~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~ 208 (366)
..++++.++.+++..++............+++.+....+.... +.++..+...++.+++++++||+|+|+.+
T Consensus 226 ~~~~n~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~------ 299 (473)
T PRK10429 226 LIYKNDQLSCLLGMALAYNIASNIINGFAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILW------ 299 (473)
T ss_pred HHhcCHHHHHHHHHHHHHHHHHHHHhhheeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHH------
Confidence 3457777776666666555444444444444444432232222 45555577888999999999999997654
Q ss_pred HHHHHHHHHHHHHHH------hcchhHHHHHHHHHHHHhhhhhhhHHHHHHHh-------hCCCchhhHHHHHHhHhhhh
Q 017795 209 AVAQVVMAFALLYYA------IGWPGEIYVTTVLVGLSYGAHWAIVPAAASEL-------FGLKSFGALYNFLTLASPAG 275 (366)
Q Consensus 209 ~~~~~~~~~~~~l~~------~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~-------f~~~~~g~~~g~~~~~~~~G 275 (366)
.++.++.+++.+.+. ..+...+++..++.|++.+..++..+++++|. .|.+.-|..++..+...-+|
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~ 379 (473)
T PRK10429 300 AGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGG 379 (473)
T ss_pred HHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHH
Confidence 333333333322211 12233455666778899998888889999988 44566788999999999999
Q ss_pred HHHhhhhHHHHHhhhhh
Q 017795 276 SLIFSGVIASGIYDYYA 292 (366)
Q Consensus 276 ~~i~gp~i~G~l~d~~~ 292 (366)
..+ |+.+.|++.+..|
T Consensus 380 ~al-~~~i~g~~l~~~G 395 (473)
T PRK10429 380 SAF-AAFFIGVVLGLIG 395 (473)
T ss_pred HHH-HHHHHHHHHHHcC
Confidence 996 9999999998765
No 150
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.12 E-value=3.2e-09 Score=102.39 Aligned_cols=167 Identities=14% Similarity=0.040 Sum_probs=112.2
Q ss_pred HHhcHHHHHHHhCCChhHH-HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHhc----chhH
Q 017795 155 VIDNLGQICQSLGYADTSI-YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAIG----WPGE 229 (366)
Q Consensus 155 ~~~~l~~i~~~~g~~~~~~-~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~~----~~~~ 229 (366)
+...+|.+.+++|++.+++ ..+...+... ..+++|+++||+..|+.-+|+.++..+.++.++....++.. +...
T Consensus 7 ~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~-~~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l~~ 85 (356)
T TIGR00901 7 VGNTLPYWLRSKNVSLKTIGFFSLVGLPYS-LKFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDLPL 85 (356)
T ss_pred HHhHHHHHHHHcCCCHHHHHHHHHHHHHHH-HHHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhHHH
Confidence 4456888999999998876 4443333333 38999999999832211123333455555555554444322 2223
Q ss_pred HHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhhhhhhhhhhhccCCCCCc
Q 017795 230 IYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPV 309 (366)
Q Consensus 230 l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~~~~~~~~~~~~~~~~~~ 309 (366)
++...++.+++.+...+...++++|.+++++|+.+.++...+..+|..+ ++.+++.+.+..+.++
T Consensus 86 l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~-~~~l~~~l~~~~g~~~-------------- 150 (356)
T TIGR00901 86 LAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLL-SGSLALVLASPEFANT-------------- 150 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHH-HHHHHHHHhhhccccc--------------
Confidence 4445556677777777777889999999999999999999999999996 8999998887665110
Q ss_pred ccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHH
Q 017795 310 SFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVV 347 (366)
Q Consensus 310 ~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~ 347 (366)
.....||..|++.+++.+++.+..+++.
T Consensus 151 ----------~~~~~wr~~f~i~ai~~l~~~~~~~~~~ 178 (356)
T TIGR00901 151 ----------GLITLWGYIFFWTALLILPGLLVTLFLA 178 (356)
T ss_pred ----------ccccccHHHHHHHHHHHHHHHHHHHHhc
Confidence 0123499999988877766555444333
No 151
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.11 E-value=2e-09 Score=108.52 Aligned_cols=137 Identities=11% Similarity=0.020 Sum_probs=93.6
Q ss_pred CCHHHHhhhhHHHHHHHHHHHhhhhHHHHHhcHHHHHHH-hCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCc
Q 017795 127 FTLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYP 203 (366)
Q Consensus 127 ~~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~-~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~ 203 (366)
..+++++++|..|.+.++++|.....+++.+|+|.+.++ .|++..++ +...+.++++++.+++|++|||+.. ....
T Consensus 264 ~~~~~a~~dp~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~-~~~~ 342 (495)
T KOG2533|consen 264 KGFKEALKDPGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKT-IFAR 342 (495)
T ss_pred HHHHHHHhchhHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhh-hHHH
Confidence 457789999999999999999999999999999999998 56887766 7788889999999999999999530 0001
Q ss_pred hhHHHHHHHHHHHHHHHHHH-hcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhH
Q 017795 204 RPVAMAVAQVVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGAL 264 (366)
Q Consensus 204 R~~~~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~ 264 (366)
|..+.....+...++...+. .......+.+.+....+.+...+.....+++....+.+...
T Consensus 343 ~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~ 404 (495)
T KOG2533|consen 343 RLLFIVFLCLYAIIGAISLLAAAVLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNTKALT 404 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccchHHhHHHHhcchhhHHHHHHHHhhccccccchHHhHH
Confidence 22333444555555644443 32234444444444445555556666666666655543333
No 152
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.10 E-value=3.1e-09 Score=108.31 Aligned_cols=155 Identities=14% Similarity=0.145 Sum_probs=118.1
Q ss_pred HHhhhhHHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHH
Q 017795 131 QALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAM 208 (366)
Q Consensus 131 ~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~ 208 (366)
..++++.|..++++.+....+.......++.++.++.-++... ......+-.++..+++|.+.||+.||+.+
T Consensus 5 aplr~~~Fr~lw~a~~iS~lG~~~~~va~~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrril------ 78 (524)
T PF05977_consen 5 APLRNRNFRRLWIAQLISNLGDWMQTVALAWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRIL------ 78 (524)
T ss_pred ccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHH------
Confidence 3468888998988888887777777666777776665444333 33444455567888999999999988765
Q ss_pred HHHHHHHHHHHHHH---H---hcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhh
Q 017795 209 AVAQVVMAFALLYY---A---IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGV 282 (366)
Q Consensus 209 ~~~~~~~~~~~~l~---~---~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~ 282 (366)
..+.++.++..+++ . ..+++.+++..++.|++.....+...++++|+.+.++...+.++.++..++...+ ||.
T Consensus 79 i~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~i-GPa 157 (524)
T PF05977_consen 79 ILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARII-GPA 157 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhc-cch
Confidence 44544443332221 1 2345677888899999998888999999999999999999999999999999996 999
Q ss_pred HHHHHhhhhh
Q 017795 283 IASGIYDYYA 292 (366)
Q Consensus 283 i~G~l~d~~~ 292 (366)
++|.++...|
T Consensus 158 lgG~Lva~~G 167 (524)
T PF05977_consen 158 LGGILVAFFG 167 (524)
T ss_pred HHHHHHHHHH
Confidence 9999998887
No 153
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.09 E-value=4.1e-09 Score=117.08 Aligned_cols=156 Identities=13% Similarity=0.065 Sum_probs=116.1
Q ss_pred HHHHhhhhHHHHHHHHHHHhhhhHHHHHhcHHHHHHH-hCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchh
Q 017795 129 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRP 205 (366)
Q Consensus 129 ~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~-~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~ 205 (366)
++.+.+++.+|.+.+.+++..+....+..++|.+.++ +|.+.... +.+.+.++..+|.++.|+++|+..+++..
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~--- 294 (1140)
T PRK06814 218 LKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYV--- 294 (1140)
T ss_pred HHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeee---
Confidence 4556677888888877777766666677788998876 68876654 77888899999999999999877665433
Q ss_pred HHHHHHHHHHHHHHHHHHh---------------------cchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhH
Q 017795 206 VAMAVAQVVMAFALLYYAI---------------------GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGAL 264 (366)
Q Consensus 206 ~~~~~~~~~~~~~~~l~~~---------------------~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~ 264 (366)
..+.++.+++.+.+.. .+...++++.+++|++.+...+...+++.+.++.+.+|++
T Consensus 295 ---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v 371 (1140)
T PRK06814 295 ---PIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARV 371 (1140)
T ss_pred ---hHHHHHHHHHHHHHHhcccccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceee
Confidence 1222222222111111 3344556777888999888888889999999999999999
Q ss_pred HHHHHhHhhhhHHHhhhhHHHHHhhhh
Q 017795 265 YNFLTLASPAGSLIFSGVIASGIYDYY 291 (366)
Q Consensus 265 ~g~~~~~~~~G~~i~gp~i~G~l~d~~ 291 (366)
+|+.++...+|..+ ++.++|.+++..
T Consensus 372 ~g~~~~~~~~~~~i-g~~~~g~l~~~~ 397 (1140)
T PRK06814 372 IAANNVLNAAFMVA-GTIILALLQALG 397 (1140)
T ss_pred eHHHHHHHHHHHHH-HHHHHHHHHHhc
Confidence 99999999999996 899999988644
No 154
>PRK10133 L-fucose transporter; Provisional
Probab=99.09 E-value=5.4e-09 Score=104.46 Aligned_cols=155 Identities=12% Similarity=0.075 Sum_probs=109.7
Q ss_pred HHHHhhhhHHHHHHHHHHHhhhhHHHHHhcHHHHH-H-HhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCch
Q 017795 129 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQIC-Q-SLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPR 204 (366)
Q Consensus 129 ~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~-~-~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R 204 (366)
.++.++++.+|...+..++..+.......+++.+. + .+|++.... ....+.++.++|++++|+++||+++|+..
T Consensus 251 ~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l-- 328 (438)
T PRK10133 251 LSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVL-- 328 (438)
T ss_pred HHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHH--
Confidence 45677889888776666666655555566777664 4 468888765 77888889999999999999999987654
Q ss_pred hHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHH
Q 017795 205 PVAMAVAQVVMAFALLYYAIGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIA 284 (366)
Q Consensus 205 ~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~ 284 (366)
..+.++.++++++.........+....+.|+|.+..++...+...+.++. +.+++.++..+. .+|+.+ +|.+.
T Consensus 329 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~glg~~~i~P~~~s~a~~~~~~-~~~~as~l~~~~-~~g~~~-~~~i~ 401 (438)
T PRK10133 329 ----AAYALIAMALCLISAFAGGHVGLIALTLCSAFMSIQYPTIFSLGIKNLGQ-DTKYGSSFIVMT-IIGGGI-VTPVM 401 (438)
T ss_pred ----HHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHcccch-hhccchhHHhHH-hccchH-HHHHH
Confidence 33333333333333222112334566788999999999999998888865 466777777643 467775 78999
Q ss_pred HHHhhhhh
Q 017795 285 SGIYDYYA 292 (366)
Q Consensus 285 G~l~d~~~ 292 (366)
|++.|..+
T Consensus 402 G~l~~~~g 409 (438)
T PRK10133 402 GFVSDAAG 409 (438)
T ss_pred HHHHHhcc
Confidence 99998765
No 155
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.08 E-value=1.6e-09 Score=104.81 Aligned_cols=174 Identities=17% Similarity=0.174 Sum_probs=131.5
Q ss_pred HHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHH
Q 017795 137 DFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVV 214 (366)
Q Consensus 137 ~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~ 214 (366)
..|+-++++..+....+......+++.+++|+|..+. +++++.+.+.+.|+..|++.||+|-|+.. ...+++
T Consensus 15 ~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~------~~s~~l 88 (417)
T COG2223 15 NLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWT------ILSMLL 88 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHH------HHHHHH
Confidence 4565666666666666666666677778999998887 89999999999999999999999987665 666666
Q ss_pred HHHHHHHHH--hcch--hHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhh
Q 017795 215 MAFALLYYA--IGWP--GEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDY 290 (366)
Q Consensus 215 ~~~~~~l~~--~~~~--~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~ 290 (366)
+.+..+.++ ..++ +.++++.++.|++ |+.++...+.++..||+++.|.+.|+.. .+++|..+ ...++..+...
T Consensus 89 ~~IP~~~~~~a~~~~~~~~ll~~gll~G~~-GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av-~q~~~P~v~~~ 165 (417)
T COG2223 89 LLIPCLGLAFAVTYPSTWQLLVIGLLLGLA-GASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAV-AQLVAPLVAVA 165 (417)
T ss_pred HHHHHHHHHHHccCCchHHHHHHHHHHhcc-cceehcccccccccCChhhhhHHHHHhc-cccccHHH-HHHHHHHHHHH
Confidence 666655544 2222 3788888888887 5568888899999999999999999998 88888886 66666666655
Q ss_pred hhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHHh
Q 017795 291 YAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVH 348 (366)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~ 348 (366)
.+.. .|+.+..+.....++.+++.++...
T Consensus 166 ~g~~-----------------------------~w~~~~~i~~~~l~v~~v~~~~~~~ 194 (417)
T COG2223 166 FGFL-----------------------------AWRNVAGIYVVALAIAAVLAWLGMN 194 (417)
T ss_pred HhhH-----------------------------HHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 5410 1888888888777777766665543
No 156
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.08 E-value=1.8e-08 Score=99.26 Aligned_cols=176 Identities=13% Similarity=0.147 Sum_probs=104.8
Q ss_pred CHHHHhhhhHHHHHHHHHHHhhhhHHHH-HhcHHHHHHHhCCChhHH--HHHHHH-HHHhhhhhhhhhhhhhhhhhccCc
Q 017795 128 TLPQALMKADFLLLFFSLVLASGSGLTV-IDNLGQICQSLGYADTSI--YVSMIS-IWNFLGRVGGGYFSEAIVRKFAYP 203 (366)
Q Consensus 128 ~~~~~l~~~~~~ll~~~~~~~~~~~~~~-~~~l~~i~~~~g~~~~~~--~~sl~~-i~~~~g~~~~G~lsD~~grr~~~~ 203 (366)
++++.++++.+|.+++..++........ ....+.+.+++|++.... ..+..+ ++..+|.+++|+++||+++|+..
T Consensus 201 ~~~~l~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l- 279 (402)
T PRK11902 201 PLRDFFSRRGAWALLLLIVLYKLGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSL- 279 (402)
T ss_pred HHHHHHhCcCHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHH-
Confidence 3566778888887665544443322222 233344556689987765 333333 45788999999999999986543
Q ss_pred hhHHHHHHHHHHHHHHHHHHh--cchhHHHHHHH----HHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHH
Q 017795 204 RPVAMAVAQVVMAFALLYYAI--GWPGEIYVTTV----LVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSL 277 (366)
Q Consensus 204 R~~~~~~~~~~~~~~~~l~~~--~~~~~l~~~~~----l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~ 277 (366)
........+..+.+.+++. .+...+++..+ +.|++.+...+....++.+.++.+. +++.+....+|..
T Consensus 280 --~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~ 353 (402)
T PRK11902 280 --MLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSATQ----YALLSALASVGRV 353 (402)
T ss_pred --HHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHH----HHHHHHHHHHHHH
Confidence 1111122222222222232 22233333333 3455555556666666666666544 4555555667777
Q ss_pred HhhhhHHHHHhhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHH
Q 017795 278 IFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMS 343 (366)
Q Consensus 278 i~gp~i~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~ 343 (366)
+ ++.++|.++|..| |+..|.+.+++++++.++.
T Consensus 354 ~-~~~~~G~l~~~~G--------------------------------~~~~f~~~~~~~~~~~~~~ 386 (402)
T PRK11902 354 Y-VGPTSGYLVEAYG--------------------------------WPGFYLMTVVIALPGLALL 386 (402)
T ss_pred H-HHHHHHHHHHHhC--------------------------------hHHHHHHHHHHHHHHHHHH
Confidence 5 5568999999988 9999998887777765544
No 157
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.08 E-value=9.5e-10 Score=112.06 Aligned_cols=127 Identities=14% Similarity=0.012 Sum_probs=108.2
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH-hcchhHHHHHHHHHHHHhhhhhhhHHHHH
Q 017795 174 YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAA 252 (366)
Q Consensus 174 ~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~ 252 (366)
..+++.++..+|.+++|++||++|||+.+ ..++++..++.+..+ ..+...+++.+++.|++.++..+..+.++
T Consensus 123 ~~s~~~~G~~vG~~i~g~lsD~~GRk~~~------~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~~~~~~~ 196 (521)
T KOG0255|consen 123 GQSLFFLGVLVGSLIFGPLSDRFGRKPVL------LVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLTVGFGLV 196 (521)
T ss_pred HHHHHHHHHHHHHhhheehHhhcccHHHH------HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhHHhHhhh
Confidence 78888899999999999999999998776 667766666666655 56777889999999999999999999999
Q ss_pred HHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHH
Q 017795 253 SELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIM 332 (366)
Q Consensus 253 se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~ 332 (366)
+|++++++|+.+..+ ......++.+ +|.+++++.. + ||+.+++.
T Consensus 197 ~E~~~~~~R~~~~~~-~~~~~~~~~~-~~~~~a~~~~--~--------------------------------Wr~~~~~~ 240 (521)
T KOG0255|consen 197 AEIVSPKQRGLALTL-GGFFFVGGLM-LPAGAAYITR--D--------------------------------WRWLFWII 240 (521)
T ss_pred eeecCcchhhHHHHH-HHHHHHHHHH-HHHHHHHHHh--h--------------------------------HHHHHHHH
Confidence 999999999999999 6776777775 7888888776 3 99999999
Q ss_pred HHHHHHHHHH
Q 017795 333 AGLCIIAMVM 342 (366)
Q Consensus 333 ~~~~~~~~~~ 342 (366)
...+++..+.
T Consensus 241 ~~~~~~~~~~ 250 (521)
T KOG0255|consen 241 SIPSGLFLLL 250 (521)
T ss_pred HHHHHHHHHH
Confidence 8888776655
No 158
>PRK09848 glucuronide transporter; Provisional
Probab=99.08 E-value=2.8e-09 Score=106.51 Aligned_cols=157 Identities=12% Similarity=0.074 Sum_probs=110.4
Q ss_pred HHHHhhhhHHHHHHHHHHHhhhhHHHHHhcHHHHHHH-hCCChhHH-HHHHH-HHHHhhhhhhhhhhhhhhhhhccCchh
Q 017795 129 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI-YVSMI-SIWNFLGRVGGGYFSEAIVRKFAYPRP 205 (366)
Q Consensus 129 ~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~-~g~~~~~~-~~sl~-~i~~~~g~~~~G~lsD~~grr~~~~R~ 205 (366)
+++.++++.++.+.+..++............|++.++ +|.+.... +.... .++.+++.+++++++||+++|+.+
T Consensus 221 ~~~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~--- 297 (448)
T PRK09848 221 LQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTF--- 297 (448)
T ss_pred HHHHhCCchHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH---
Confidence 4567889999888777777666555555566666654 56554433 32232 455677889999999999887654
Q ss_pred HHHHHHHHHHHHHHHHHHhc---chhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCC-------CchhhHHHHHHhHhhhh
Q 017795 206 VAMAVAQVVMAFALLYYAIG---WPGEIYVTTVLVGLSYGAHWAIVPAAASELFGL-------KSFGALYNFLTLASPAG 275 (366)
Q Consensus 206 ~~~~~~~~~~~~~~~l~~~~---~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~-------~~~g~~~g~~~~~~~~G 275 (366)
.++.++.+++.+++... +...+++..++.|+|.+...+...++.+|..+. ++.|..+++.+....+|
T Consensus 298 ---~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg 374 (448)
T PRK09848 298 ---LIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCG 374 (448)
T ss_pred ---HHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHH
Confidence 55555655555554322 223445566778889888888888888877643 45699999999999999
Q ss_pred HHHhhhhHHHHHhhhhh
Q 017795 276 SLIFSGVIASGIYDYYA 292 (366)
Q Consensus 276 ~~i~gp~i~G~l~d~~~ 292 (366)
..+ |+.+.|.+.+..|
T Consensus 375 ~ai-g~~i~g~~l~~~G 390 (448)
T PRK09848 375 QAI-GGSIPAFILGLSG 390 (448)
T ss_pred HHH-HHHHHHHHHHHcC
Confidence 996 9999999987665
No 159
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.07 E-value=6.5e-09 Score=103.02 Aligned_cols=156 Identities=10% Similarity=-0.033 Sum_probs=110.3
Q ss_pred CHHHHhhhhHHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCC--ChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCc
Q 017795 128 TLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLGY--ADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYP 203 (366)
Q Consensus 128 ~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~--~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~ 203 (366)
++++.++++.++...++.++..+...+..++++.+.++.+. +.... +.+.......+||+++|++.||+++|+..
T Consensus 224 ~~~~~~~~~~~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l- 302 (410)
T TIGR00885 224 SLSRLARIRHYREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVL- 302 (410)
T ss_pred hHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHH-
Confidence 34577888989887777777766666677788888876543 33222 56666677889999999999999776533
Q ss_pred hhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhH
Q 017795 204 RPVAMAVAQVVMAFALLYYAIGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVI 283 (366)
Q Consensus 204 R~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i 283 (366)
.+..++.++.+++..........++.++.|++.+..|+...+...+..+++......++.... +|+.+ .|.+
T Consensus 303 -----~i~~~~~~~~~ll~~~~~~~~~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~~--~Gga~-~p~l 374 (410)
T TIGR00885 303 -----MAYAIIGMALCLGSIFAGGHVGLYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVMAI--IGGGI-VPPL 374 (410)
T ss_pred -----HHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHH--hccch-HHHH
Confidence 444444444444444333334466777888888899999999999999876654444444433 88886 7999
Q ss_pred HHHHhhhhh
Q 017795 284 ASGIYDYYA 292 (366)
Q Consensus 284 ~G~l~d~~~ 292 (366)
.|++.|..+
T Consensus 375 ~G~~~d~~~ 383 (410)
T TIGR00885 375 QGFIIDMKE 383 (410)
T ss_pred HHHHHHHhc
Confidence 999999653
No 160
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.07 E-value=2.9e-09 Score=103.16 Aligned_cols=181 Identities=17% Similarity=0.208 Sum_probs=134.2
Q ss_pred HHHHhhhhHHHHHHHHHHHhhhhHHHHHhcHHHHHH-HhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchh
Q 017795 129 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQ-SLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRP 205 (366)
Q Consensus 129 ~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~-~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~ 205 (366)
++++.+.++...+.++.+...=...+.......+.. ++|++..+. +....++..++|.+++|++.||++.|...
T Consensus 245 ~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl--- 321 (438)
T COG2270 245 FKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVL--- 321 (438)
T ss_pred HHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceee---
Confidence 445555555555555554443333344444555665 799998887 66677888999999999999999988655
Q ss_pred HHHHHHHHHH-HHHHHHHHhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHH
Q 017795 206 VAMAVAQVVM-AFALLYYAIGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIA 284 (366)
Q Consensus 206 ~~~~~~~~~~-~~~~~l~~~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~ 284 (366)
.++.++. .++...+....+....++..++|++.|+.++..-++.+++.|+++-+..+|+.++.+..++.+ ||.+.
T Consensus 322 ---~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~-gp~lv 397 (438)
T COG2270 322 ---MIGLVILSIAALYLIFLEGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFL-GPFLV 397 (438)
T ss_pred ---hHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHH-HHHHH
Confidence 3443333 333333444445667778889999999999999999999999999999999999999999995 99999
Q ss_pred HHHhhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHH
Q 017795 285 SGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVV 347 (366)
Q Consensus 285 G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~ 347 (366)
+.+.+.++ +-|..+..+..+.+++.++.+.+.
T Consensus 398 ~v~t~iTg-------------------------------~~r~g~~~i~vll~iGl~~L~~v~ 429 (438)
T COG2270 398 AVITQITG-------------------------------SSRAGVLSIIVLLLIGLLLLLRVK 429 (438)
T ss_pred HHHHHHhc-------------------------------chhhHHHHHHHHHHhhHhhEEeec
Confidence 99999988 367777777777777666554443
No 161
>PRK09669 putative symporter YagG; Provisional
Probab=99.06 E-value=6.4e-09 Score=103.83 Aligned_cols=157 Identities=14% Similarity=0.093 Sum_probs=103.6
Q ss_pred HHHHhhhhHHHHHHHHHHHhhhhHHHHHhcHHHHHHHh-CCChhHH-HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhH
Q 017795 129 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSL-GYADTSI-YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPV 206 (366)
Q Consensus 129 ~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~-g~~~~~~-~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~ 206 (366)
+++.++++.+|.+++..++.............++.+.. +...... +.....+...++.+++++++||+|+|+..
T Consensus 222 ~~~~~~n~~~~~l~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~---- 297 (444)
T PRK09669 222 LKLLLGNSQWRIMFIFNVVLLTAVVTRGGATLYYVNYVLLRPDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAF---- 297 (444)
T ss_pred HHHHhCCchHHHHHHHHHHHHHHHHHHhhhhheeeeeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHH----
Confidence 55677889888877666554443332223233333322 2222222 44444566778889999999999987654
Q ss_pred HHHHHHHHHHH-HHHHHH--hcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhh-------CCCchhhHHHHHHhHhhhhH
Q 017795 207 AMAVAQVVMAF-ALLYYA--IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELF-------GLKSFGALYNFLTLASPAGS 276 (366)
Q Consensus 207 ~~~~~~~~~~~-~~~l~~--~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f-------~~~~~g~~~g~~~~~~~~G~ 276 (366)
..+.++.++ +..++. ..+...+++..++.|++.++..++.+++++|.. |.+.-|..++..+....+|.
T Consensus 298 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~ 375 (444)
T PRK09669 298 --KWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGL 375 (444)
T ss_pred --HHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHH
Confidence 333333332 222222 233445667778889999999999999999887 44557788899999999999
Q ss_pred HHhhhhHHHHHhhhhh
Q 017795 277 LIFSGVIASGIYDYYA 292 (366)
Q Consensus 277 ~i~gp~i~G~l~d~~~ 292 (366)
.+ |+.++|.+.|..|
T Consensus 376 al-g~~i~g~ll~~~G 390 (444)
T PRK09669 376 AI-GGAVVGWILAWVD 390 (444)
T ss_pred HH-HHHHHHHHHHHcC
Confidence 96 9999999999776
No 162
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.05 E-value=1.2e-08 Score=113.27 Aligned_cols=154 Identities=15% Similarity=0.079 Sum_probs=112.7
Q ss_pred HHHHhhhhHHHHHHHHHHHhhhhHHHHHhcHHHHHH-HhCCChh-HH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCch
Q 017795 129 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQ-SLGYADT-SI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPR 204 (366)
Q Consensus 129 ~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~-~~g~~~~-~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R 204 (366)
++..++++.+|.+.+..++.......+..++|.+.+ .+|++.. .. +.++..++.++|.+++|+++||++++...
T Consensus 225 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~-- 302 (1146)
T PRK08633 225 LKLLRSDRVLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLV-- 302 (1146)
T ss_pred HHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccch--
Confidence 445667777787766666655555556667777765 4788766 44 67777888889999999999999876544
Q ss_pred hHHHHHHHHHHHHHHHHHH-hcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhH
Q 017795 205 PVAMAVAQVVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVI 283 (366)
Q Consensus 205 ~~~~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i 283 (366)
.++.++++++.+++. ..+...++++.+++|++.+...+...+++.+.++.+.+|+++++.++...+|..+ ++.+
T Consensus 303 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~-~~~~ 377 (1146)
T PRK08633 303 ----PLGALGLALSLFLLPTAPSLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLL-FLAL 377 (1146)
T ss_pred ----hHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHH-HHHH
Confidence 444555555554444 3344456677788899988888888889999999999999999999999999875 6766
Q ss_pred HHHHhh
Q 017795 284 ASGIYD 289 (366)
Q Consensus 284 ~G~l~d 289 (366)
++.+..
T Consensus 378 ~~~l~~ 383 (1146)
T PRK08633 378 TTLFSG 383 (1146)
T ss_pred HHHHHH
Confidence 665543
No 163
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.04 E-value=1.8e-08 Score=100.75 Aligned_cols=190 Identities=16% Similarity=0.103 Sum_probs=122.8
Q ss_pred CCCCHHHHhhhhHH----HHHHHHHHHhhhhHHH-HHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhh
Q 017795 125 EDFTLPQALMKADF----LLLFFSLVLASGSGLT-VIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIV 197 (366)
Q Consensus 125 ~~~~~~~~l~~~~~----~ll~~~~~~~~~~~~~-~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~g 197 (366)
++.+++|.++++.. ++.+...++....+.. ...+--.+.++-|++...+ .....++.+.+..+.+.++.||+|
T Consensus 254 ~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~g 333 (485)
T KOG0569|consen 254 KQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLG 333 (485)
T ss_pred cCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 55678888876532 2333333444444333 3333445778889987765 677778889999999999999999
Q ss_pred hhccCchhHHHHHHHHHHHHHHHHHH-------hcchhHH---HHHHHHHHHHhh-hhhhhHHHHHHHhhCCCchhhHHH
Q 017795 198 RKFAYPRPVAMAVAQVVMAFALLYYA-------IGWPGEI---YVTTVLVGLSYG-AHWAIVPAAASELFGLKSFGALYN 266 (366)
Q Consensus 198 rr~~~~R~~~~~~~~~~~~~~~~l~~-------~~~~~~l---~~~~~l~G~~~g-~~~~~~~~~~se~f~~~~~g~~~g 266 (366)
||+.. ..+..++++..+++. ...++.. +++.+++.++++ +..++.+-+.+|+|+++.|+.+..
T Consensus 334 RRpLl------l~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s 407 (485)
T KOG0569|consen 334 RRPLL------LISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQS 407 (485)
T ss_pred CcHHH------HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHH
Confidence 98655 444444443333322 1111222 233333443333 224667779999999999999999
Q ss_pred HHHhHhhhhHHHhhhhHHHHHhhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHH
Q 017795 267 FLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIV 346 (366)
Q Consensus 267 ~~~~~~~~G~~i~gp~i~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~ 346 (366)
+.....-+..++ -....-.+.+..| ...|.+..+.+.+..+..+..
T Consensus 408 ~~~~~~w~~~fi-v~~~fp~l~~~~g---------------------------------~~~filF~i~~~~~~i~~~~~ 453 (485)
T KOG0569|consen 408 VATAVNWLSNFI-VGFAFPPLQNVIG---------------------------------PYVFILFVIPLAIFLIYLYRY 453 (485)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHhc---------------------------------chhhHHHHHHHHHHHHHHHHh
Confidence 999988888886 3455555555555 146777777788878788788
Q ss_pred HhhcHHHH
Q 017795 347 VHRTKSVY 354 (366)
Q Consensus 347 ~~~~r~~~ 354 (366)
.++||.+.
T Consensus 454 lPETkgr~ 461 (485)
T KOG0569|consen 454 LPETKGRT 461 (485)
T ss_pred CcccCCCC
Confidence 88888533
No 164
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.04 E-value=7.5e-09 Score=100.26 Aligned_cols=152 Identities=16% Similarity=0.071 Sum_probs=101.7
Q ss_pred HHHHhhhhHHHHHHHHHHHhhhhHHHHHhcHHHHHH-HhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchh
Q 017795 129 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQ-SLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRP 205 (366)
Q Consensus 129 ~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~-~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~ 205 (366)
+++.++++.+|...+...+.......+..+.|.+.+ ++|+++... ..+...++..+++++.|+++||+++|+..
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~--- 275 (385)
T TIGR00710 199 FLLLLKSKMFWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLL--- 275 (385)
T ss_pred HHHHHcCchhHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHH---
Confidence 345677888887776665555555566667777765 688887665 66677888899999999999999887544
Q ss_pred HHHHHHHHHHHHHHHHHHh----c-c-hhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHh
Q 017795 206 VAMAVAQVVMAFALLYYAI----G-W-PGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIF 279 (366)
Q Consensus 206 ~~~~~~~~~~~~~~~l~~~----~-~-~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~ 279 (366)
..+.+++.++.+++.. . . ...++...++.|++.+...+.......|.++ +.++++.++.+.....++.+.
T Consensus 276 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~ 351 (385)
T TIGR00710 276 ---RMGLILFAVSAVLLEITAILGLGSWAMIIGPMMFVGIGNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIV 351 (385)
T ss_pred ---HHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHH
Confidence 3333333333333221 1 1 1233445567788888878888888888876 678999999888776655543
Q ss_pred hhhHHHHHh
Q 017795 280 SGVIASGIY 288 (366)
Q Consensus 280 gp~i~G~l~ 288 (366)
+| +.|.+.
T Consensus 352 ~~-~~~~~~ 359 (385)
T TIGR00710 352 GY-LVSLIH 359 (385)
T ss_pred HH-HHHhcc
Confidence 44 455443
No 165
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.03 E-value=6.3e-09 Score=104.35 Aligned_cols=155 Identities=12% Similarity=0.091 Sum_probs=119.0
Q ss_pred HHHhhhhHHHHHHHHHHHhhhhHHHHHhcHHHHHHH-hCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhH
Q 017795 130 PQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPV 206 (366)
Q Consensus 130 ~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~-~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~ 206 (366)
.+.++++.++...+..++..........++|.+.++ +|++..+. ......++..+++++.|+++||++||+..
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~---- 324 (485)
T TIGR00711 249 LRLFKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLV---- 324 (485)
T ss_pred HHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHH----
Confidence 457788888887777666666666667788988876 78887665 66667788899999999999999886543
Q ss_pred HHHHHHHHHHHHHHHHH--h-c--chhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhh
Q 017795 207 AMAVAQVVMAFALLYYA--I-G--WPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSG 281 (366)
Q Consensus 207 ~~~~~~~~~~~~~~l~~--~-~--~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp 281 (366)
.++..+++++.+++. . . +...+++..++.|++.+..++.....+.+.+|++++|++.++.+....+|+.+ |+
T Consensus 325 --~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~i-g~ 401 (485)
T TIGR00711 325 --TIGLILYAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSI-GT 401 (485)
T ss_pred --HHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHH-HH
Confidence 556666666655544 1 1 22345566778899888877766777778889999999999999999999996 99
Q ss_pred hHHHHHhhhh
Q 017795 282 VIASGIYDYY 291 (366)
Q Consensus 282 ~i~G~l~d~~ 291 (366)
.+.|.+++..
T Consensus 402 ~i~g~~~~~~ 411 (485)
T TIGR00711 402 ALITTILTNR 411 (485)
T ss_pred HHHHHHHHHH
Confidence 9999998854
No 166
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.01 E-value=1.3e-08 Score=98.29 Aligned_cols=103 Identities=18% Similarity=0.251 Sum_probs=81.8
Q ss_pred HHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHh-cchh--------HHHHHHHHHHHHhhhhhhhHHH
Q 017795 180 IWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAI-GWPG--------EIYVTTVLVGLSYGAHWAIVPA 250 (366)
Q Consensus 180 i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~-~~~~--------~l~~~~~l~G~~~g~~~~~~~~ 250 (366)
+...++.++.|+++||+|||+.+ ..+.++.+++.++... .+.. .+++.+++.|++.+..++....
T Consensus 46 ~~~~i~~~~~G~l~dr~g~r~~l------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~ 119 (394)
T TIGR00883 46 LARPLGAIVFGHFGDRIGRKKTL------VITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAAL 119 (394)
T ss_pred HHhhhHHHHhhhhhhhhhhHHHH------HHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHH
Confidence 33456889999999999998765 5666666666666553 2221 3667788999999988888999
Q ss_pred HHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhh
Q 017795 251 AASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYD 289 (366)
Q Consensus 251 ~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d 289 (366)
+++|.++.++|+...++...+..+|..+ ++.+.+.+..
T Consensus 120 ~~~~~~~~~~r~~~~~~~~~~~~~G~~i-~~~~~~~~~~ 157 (394)
T TIGR00883 120 YLAEYAPPGKRGFYGSFQQVGAPVGLLL-AALTVLLLSY 157 (394)
T ss_pred HhhhcCCcccchHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 9999999999999999999999999996 8887776654
No 167
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.01 E-value=2.5e-08 Score=98.44 Aligned_cols=159 Identities=19% Similarity=0.195 Sum_probs=109.9
Q ss_pred CHHHHhhhhHHHHHHHHHHHhhhhHHHHHhcHHHHHHHhC-CChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCch
Q 017795 128 TLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLG-YADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPR 204 (366)
Q Consensus 128 ~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g-~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R 204 (366)
+..+.+|+++++.+++..++...+...+..+.+.+.++.| ++.... ..++-.+...+.-...+++-.|+|.|+
T Consensus 199 ~~~~llk~~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~---- 274 (400)
T PF03825_consen 199 DALKLLKNPRFLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKW---- 274 (400)
T ss_pred HHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH----
Confidence 3457889999888777777766666667778888999998 665443 334444444444445555545554432
Q ss_pred hHHHHHHHHHHHHHHHHHHhc-ch-hHHHHH----HHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHh-HhhhhHH
Q 017795 205 PVAMAVAQVVMAFALLYYAIG-WP-GEIYVT----TVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTL-ASPAGSL 277 (366)
Q Consensus 205 ~~~~~~~~~~~~~~~~l~~~~-~~-~~l~~~----~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~-~~~~G~~ 277 (366)
.+.++.+..++=..+++.. ++ ...++. ..+-|++++..+.....++.+..|++.++++.++.+. ...+|..
T Consensus 275 --ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~ 352 (400)
T PF03825_consen 275 --LLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGA 352 (400)
T ss_pred --HHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHH
Confidence 2355555555545555533 33 222222 3457999999999899999999999999999999876 4678999
Q ss_pred HhhhhHHHHHhhhhhh
Q 017795 278 IFSGVIASGIYDYYAE 293 (366)
Q Consensus 278 i~gp~i~G~l~d~~~~ 293 (366)
+ |..++|+++|..+.
T Consensus 353 i-G~~igG~l~~~~g~ 367 (400)
T PF03825_consen 353 I-GSLIGGWLYDAFGA 367 (400)
T ss_pred H-HHHHHHHHHHHhcc
Confidence 6 99999999999873
No 168
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.01 E-value=1.9e-08 Score=101.97 Aligned_cols=155 Identities=11% Similarity=-0.039 Sum_probs=118.4
Q ss_pred HHHhhhhHHHHHHHHHHHhhhhHHHHHhcHHHHHHH-hCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhH
Q 017795 130 PQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPV 206 (366)
Q Consensus 130 ~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~-~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~ 206 (366)
.+.++++.++...+..++..........++|.+.+. +|++..++ ......++..++.++.|+++||+++|+..
T Consensus 253 ~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~---- 328 (495)
T PRK14995 253 MRLFTHRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVA---- 328 (495)
T ss_pred HHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHH----
Confidence 467788888877776666666666666778887765 79988766 66667788899999999999999876533
Q ss_pred HHHHHHHHHHHHHHHHH-h---cchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhh
Q 017795 207 AMAVAQVVMAFALLYYA-I---GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGV 282 (366)
Q Consensus 207 ~~~~~~~~~~~~~~l~~-~---~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~ 282 (366)
..+.++.+++.+++. . .+....+...++.|+|.|...+.....+.+..+.+++|.+.++.++...+|+.+ |+.
T Consensus 329 --~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~-G~a 405 (495)
T PRK14995 329 --TGGMALSALSFYGLAMTDFSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGL-GIA 405 (495)
T ss_pred --HHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHH-HHH
Confidence 455555555554433 1 223345567778899998887777777888899999999999999999999996 999
Q ss_pred HHHHHhhhh
Q 017795 283 IASGIYDYY 291 (366)
Q Consensus 283 i~G~l~d~~ 291 (366)
+.|.+++..
T Consensus 406 i~g~i~~~~ 414 (495)
T PRK14995 406 IFGLLLSRS 414 (495)
T ss_pred HHHHHHHHH
Confidence 999998753
No 169
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.99 E-value=1.8e-07 Score=91.96 Aligned_cols=183 Identities=15% Similarity=0.097 Sum_probs=129.7
Q ss_pred HHHHhhhhHHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCCh----hHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccC
Q 017795 129 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYAD----TSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAY 202 (366)
Q Consensus 129 ~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~~~----~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~ 202 (366)
..+.+|+++||.+.+...........+....+.+.+++--+. ... ..++-.+..++.-.+..++-+|+|.|+.+
T Consensus 213 ~~~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~L 292 (412)
T PF01306_consen 213 VLSLFKMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLL 292 (412)
T ss_dssp HHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH
T ss_pred HHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHH
Confidence 456788999998766544443444444444566665543332 212 56666677777888888899999887765
Q ss_pred chhHHHHHHHHHHHHHHHHHH-hcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHH-HhHhhhhHHHhh
Q 017795 203 PRPVAMAVAQVVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFL-TLASPAGSLIFS 280 (366)
Q Consensus 203 ~R~~~~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~-~~~~~~G~~i~g 280 (366)
.++.+++++=....+ ..++..+.+.-.+-|+-.+.......-++++.|++|-.++.+.+. +.+..+|..+ .
T Consensus 293 ------llag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i-~ 365 (412)
T PF01306_consen 293 ------LLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIII-L 365 (412)
T ss_dssp ------HHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHH-H
T ss_pred ------HHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHH-H
Confidence 666666666555555 456667777778888887777777777999999999999999985 6788899997 5
Q ss_pred hhHHHHHhhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHHhhc
Q 017795 281 GVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHRT 350 (366)
Q Consensus 281 p~i~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~~ 350 (366)
+.++|++||+.| |+.+|++++++.+...+++.+..++.
T Consensus 366 s~~~G~lyd~~G--------------------------------~~~tylimg~iv~~~~li~~f~l~~~ 403 (412)
T PF01306_consen 366 SPLAGYLYDRIG--------------------------------FQHTYLIMGLIVLPFTLISAFTLKKD 403 (412)
T ss_dssp HHHHHHHHHHHH--------------------------------HHHHHHHHHHHHHHHHHHHHHHS--S
T ss_pred hhhHHhhHhhcC--------------------------------cHHHHHHHHHHHHHHHHHheeeecCC
Confidence 788999999998 99999999988777777777665543
No 170
>PRK11043 putative transporter; Provisional
Probab=98.99 E-value=3.3e-08 Score=96.96 Aligned_cols=159 Identities=15% Similarity=0.111 Sum_probs=105.4
Q ss_pred CHHHHhhhhHHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchh
Q 017795 128 TLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRP 205 (366)
Q Consensus 128 ~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~ 205 (366)
++++.++++++|...+.+.+.......+..+.|.+.++.|++.... ......++..+|++..+++.||+++|+..
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~--- 271 (401)
T PRK11043 195 TFKQLLKSKTYLGNVLIFAACSAAFFAWLTGSPFILEQMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLL--- 271 (401)
T ss_pred HHHHHHcChhHHHHHHHHHHHHHHHHHHHHHhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHH---
Confidence 4667788888886665555555555566677888888899987655 34445567778888899999999876543
Q ss_pred HHHHHHHHHHHHHHHHHHh---cchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhh
Q 017795 206 VAMAVAQVVMAFALLYYAI---GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGV 282 (366)
Q Consensus 206 ~~~~~~~~~~~~~~~l~~~---~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~ 282 (366)
....+...+..+...+... .+...+.+...+.|++.+..++...+...+.++ +++|++.++.+.....++.+ ++.
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~-~~~ 349 (401)
T PRK11043 272 PWLLVLFAVSVIAIWLASLLSHPSLVPLLIPFCVMAAANGAIYPIVVAQALRPFP-QATGKAAALQNTLQLGLCFL-ASL 349 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHH-HHH
Confidence 1122222222222222221 222334445566777777777777766667665 67999999999988878885 888
Q ss_pred HHHHHhhhh
Q 017795 283 IASGIYDYY 291 (366)
Q Consensus 283 i~G~l~d~~ 291 (366)
+.|.+.|..
T Consensus 350 ~~g~l~~~~ 358 (401)
T PRK11043 350 LVSALISTP 358 (401)
T ss_pred HHHHccCCC
Confidence 888887744
No 171
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.98 E-value=1.3e-08 Score=103.84 Aligned_cols=137 Identities=18% Similarity=0.206 Sum_probs=111.2
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH-hcchhHHHHHHHHHHHHhhhhhhhHHHH
Q 017795 173 IYVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAA 251 (366)
Q Consensus 173 ~~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~ 251 (366)
.+.+...++..+|.+.+|+++|++|||+.+ .++.++..++.++.+ ..+...+++++++.|+|.|+...+.+.+
T Consensus 93 ~~~s~~~lga~~g~l~~g~l~d~~GRk~~l------~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy 166 (513)
T KOG0254|consen 93 LLTSILNLGALVGSLLAGRLGDRIGRKKTL------LLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVY 166 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhHHHH------HHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhh
Confidence 489999999999999999999999998776 777778888877766 4567789999999999999999999999
Q ss_pred HHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHH
Q 017795 252 ASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGI 331 (366)
Q Consensus 252 ~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i 331 (366)
++|+-|++.||...+.......+|..+ + .+.|....... ..||..+.+
T Consensus 167 ~sEiap~~~RG~l~~~~~l~~~~Gi~~-~-~~~~~~~~~~~------------------------------~~Wr~~~~~ 214 (513)
T KOG0254|consen 167 ISEIAPAHIRGTLVSLYQLFITIGILL-G-YCINYGTSKVY------------------------------AGWRIPLGL 214 (513)
T ss_pred HhhcCChhhhHHHHHHHHHHHHHHHHH-H-HHHhhhhccCC------------------------------ccHHHHHHH
Confidence 999999999999999999998877774 5 55555544320 139988887
Q ss_pred HHHHHHHHHHHHHHHHh
Q 017795 332 MAGLCIIAMVMSLIVVH 348 (366)
Q Consensus 332 ~~~~~~~~~~~~~~~~~ 348 (366)
..+.+++-.+. +++.+
T Consensus 215 ~~i~~~~~~~~-~~~~p 230 (513)
T KOG0254|consen 215 ALIPAVILALG-MLFLP 230 (513)
T ss_pred HHHHHHHHHHH-HHhCC
Confidence 77777666555 44444
No 172
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.97 E-value=1.5e-08 Score=100.75 Aligned_cols=159 Identities=17% Similarity=0.231 Sum_probs=124.6
Q ss_pred CCHHHHhhhhHHHHHHHHHHHhhhhHHHHHhcHHHHHHH-hCCChhHH-HHHHHHHHHhhhhhhhhhhhhhhhhhccCch
Q 017795 127 FTLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI-YVSMISIWNFLGRVGGGYFSEAIVRKFAYPR 204 (366)
Q Consensus 127 ~~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~-~g~~~~~~-~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R 204 (366)
..+++.++++.++.++++.++............+++.++ +|.+.... +..+..+...++.+++++++||+|+|+.+
T Consensus 216 ~~~~~~~~nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~-- 293 (428)
T PF13347_consen 216 DSLRSLFRNRPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNEGLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVY-- 293 (428)
T ss_pred cchhhhcccchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHHccceeeh--
Confidence 346778889998888888887766666666667777766 45553333 66778888899999999999999998877
Q ss_pred hHHHHHHHHHHHHHHHHHH-h--cchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhC-------CCchhhHHHHHHhHhhh
Q 017795 205 PVAMAVAQVVMAFALLYYA-I--GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFG-------LKSFGALYNFLTLASPA 274 (366)
Q Consensus 205 ~~~~~~~~~~~~~~~~l~~-~--~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~-------~~~~g~~~g~~~~~~~~ 274 (366)
..+.++.+++.+++. . .+...+++..++.|++.+..+.+.+++.+|..+ .+.-|..+++.+....+
T Consensus 294 ----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~ 369 (428)
T PF13347_consen 294 ----IIGLLLAALGFLLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKI 369 (428)
T ss_pred ----hhhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHH
Confidence 666666666655543 2 466778888999999999999999999988765 45579999999999999
Q ss_pred hHHHhhhhHHHHHhhhhh
Q 017795 275 GSLIFSGVIASGIYDYYA 292 (366)
Q Consensus 275 G~~i~gp~i~G~l~d~~~ 292 (366)
|..+ ++.+.|.+.+..|
T Consensus 370 ~~~l-a~~i~g~~l~~~G 386 (428)
T PF13347_consen 370 GQGL-AGAIVGLLLALVG 386 (428)
T ss_pred HHHH-HHHHHHHHHHHhC
Confidence 9996 8999999988765
No 173
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.94 E-value=5.9e-09 Score=99.32 Aligned_cols=149 Identities=16% Similarity=0.233 Sum_probs=107.7
Q ss_pred HHHHhhhhHHHHHHHHHHHhhhhHHHHHhcHHHH-HHHhCCC-hhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCch
Q 017795 129 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQI-CQSLGYA-DTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPR 204 (366)
Q Consensus 129 ~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i-~~~~g~~-~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R 204 (366)
+++.++++.+|.+....++..........++|.+ .+.+|++ .... ..++..+...+++++.|+++||+++|+..
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-- 276 (352)
T PF07690_consen 199 FKSLFKNPVLWILLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRL-- 276 (352)
T ss_dssp CTHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHH--
T ss_pred cccccccchhhhhhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHH--
Confidence 4566677777755555555555555677888887 6778888 4544 58888888889999999999999875433
Q ss_pred hHHHHHHHHHHHHHHHHHHh-cchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhh
Q 017795 205 PVAMAVAQVVMAFALLYYAI-GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSG 281 (366)
Q Consensus 205 ~~~~~~~~~~~~~~~~l~~~-~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp 281 (366)
........+..++..+... .+....++..++.|++.+..++...+.+.+.+|++++|+++|+.+....+|+.+ ||
T Consensus 277 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~i-gP 352 (352)
T PF07690_consen 277 -LIAILLLILGALGLLLLPFSSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGII-GP 352 (352)
T ss_dssp -HHHHHHHHHHHHHHCCSHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHH-HH
T ss_pred -HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH-CC
Confidence 2222222222222222222 234456667788899999889999999999999999999999999999999996 76
No 174
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.93 E-value=5.3e-08 Score=97.95 Aligned_cols=176 Identities=14% Similarity=0.086 Sum_probs=116.3
Q ss_pred hhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhh----hhhhccCchhHHHHHHHHHHHHHHHHHH
Q 017795 150 GSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEA----IVRKFAYPRPVAMAVAQVVMAFALLYYA 223 (366)
Q Consensus 150 ~~~~~~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~----~grr~~~~R~~~~~~~~~~~~~~~~l~~ 223 (366)
........+++++.+++|.+.... ...+..+...+..|++|++||| +|||+.+ +..+.+..+++++++.
T Consensus 18 ~~~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~-----il~g~~~~~~~l~ll~ 92 (477)
T TIGR01301 18 FGWALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPF-----IAAGAALVAFAVILIG 92 (477)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHH-----HHHHHHHHHHHHHHHH
Confidence 333445567778899999987665 6777788899999999999995 7875443 2334444444544443
Q ss_pred hcch------------------hHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCch--hhHHHHHHhHhhhhHHHhhhhH
Q 017795 224 IGWP------------------GEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSF--GALYNFLTLASPAGSLIFSGVI 283 (366)
Q Consensus 224 ~~~~------------------~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~--g~~~g~~~~~~~~G~~i~gp~i 283 (366)
.... ....++..+..++.....+..-++++|+++.+++ +.++++.+...++|+.+ |+.+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~il-g~~~ 171 (477)
T TIGR01301 93 FAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVL-GYAA 171 (477)
T ss_pred hCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHH-HHHH
Confidence 2111 0112223334456666667778899999998754 67899999999999996 8887
Q ss_pred HHHH--hhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHHhhc
Q 017795 284 ASGI--YDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHRT 350 (366)
Q Consensus 284 ~G~l--~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~~ 350 (366)
+|+. .+..+ ....+..+.-+.+++..|++.+++.+++.++.++..+|.
T Consensus 172 g~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~ 221 (477)
T TIGR01301 172 GAYSGLYKIFP-------------------FTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKEN 221 (477)
T ss_pred HHHHhHHHhcc-------------------cccccccccccchHHHHHHHHHHHHHHHHHHHeeeeecc
Confidence 7764 22211 001112233445699999998888888887777766653
No 175
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.91 E-value=2.2e-08 Score=96.45 Aligned_cols=141 Identities=16% Similarity=0.145 Sum_probs=96.0
Q ss_pred HHHHhhhhHHHHHHHHHHHhhhhHHHHHhcHHHHHHH-hCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchh
Q 017795 129 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRP 205 (366)
Q Consensus 129 ~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~-~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~ 205 (366)
.++.++++++|.+.+.+++.......+..++|++.++ +|++..++ +.++..+...++++++|+++||+++|+..
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~--- 294 (366)
T TIGR00886 218 QLKVFRDRHTWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKL--- 294 (366)
T ss_pred HHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhH---
Confidence 4456677888888777777666666777888888865 68877655 67777888999999999999999987543
Q ss_pred HHHHHHHHHHHHHHHHH--Hhc---chhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhH
Q 017795 206 VAMAVAQVVMAFALLYY--AIG---WPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGS 276 (366)
Q Consensus 206 ~~~~~~~~~~~~~~~l~--~~~---~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~ 276 (366)
.......+.+..++ ... +.....+...+.+++.|...+..++.++++++ +++|+.+|+.+....+|+
T Consensus 295 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~ 366 (366)
T TIGR00886 295 ---LMSFLGVAMGAFLVVLGLVSPLSLAVFIVLFVALFFFSGAGNGSTFALVPHIFR-RATGAVSGLVGAIGNLGG 366 (366)
T ss_pred ---HHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHhccccchhhhcchhhch-hhcccHHHHHHHhccCCC
Confidence 22233333333222 222 22333344444555556556667777888885 799999999988877653
No 176
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.91 E-value=6.5e-08 Score=94.60 Aligned_cols=151 Identities=11% Similarity=0.071 Sum_probs=87.4
Q ss_pred HHHHhhhhHHHHHHHHHHHhhhhHHHHHhcHHHHH-HHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchh
Q 017795 129 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQIC-QSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRP 205 (366)
Q Consensus 129 ~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~-~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~ 205 (366)
.++.++++.++...+...+.......+..+.|.+. +++|++.... ..+...++..+++++.|+++||++||+..
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~--- 272 (392)
T PRK10473 196 NSESLLNRFFLSRLVITTLSVTVILTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLM--- 272 (392)
T ss_pred HHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHH---
Confidence 34567788777655554444444444555566655 4578887654 66777888899999999999999987544
Q ss_pred HHHHHHHHHHHHHHHHHHh-cchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCc-hhhHHHHHHhHhhhhHHHhhhhH
Q 017795 206 VAMAVAQVVMAFALLYYAI-GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKS-FGALYNFLTLASPAGSLIFSGVI 283 (366)
Q Consensus 206 ~~~~~~~~~~~~~~~l~~~-~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~-~g~~~g~~~~~~~~G~~i~gp~i 283 (366)
..+.++..++.+++.. ......+....+.+.|.+..++. ....++.+.++ -|.+.++. .++..+ |+.+
T Consensus 273 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~--~~~~~~~~~~~~~g~~~~~~----~~~~~~-g~~~ 342 (392)
T PRK10473 273 ---LTSQVLFLAAGITLALSPSHAVSLFGITLICAGFSVGFGV--AMSQALGPFSLRAGVASSTL----GIAQVC-GSSL 342 (392)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH--HHHHHhccCcccccHHHHHH----HHHHHH-HHHH
Confidence 4455555555444332 22233344444444444443333 23334444333 34444443 445553 5666
Q ss_pred HHHHhhhhh
Q 017795 284 ASGIYDYYA 292 (366)
Q Consensus 284 ~G~l~d~~~ 292 (366)
++++.+..+
T Consensus 343 ~~~l~~~~g 351 (392)
T PRK10473 343 WIWLAAVLG 351 (392)
T ss_pred HHHHHHHhc
Confidence 777777665
No 177
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.91 E-value=4.9e-09 Score=100.16 Aligned_cols=108 Identities=19% Similarity=0.172 Sum_probs=91.6
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHhc-chhHHHHHHHHHHHHhhhhhhhHHHHH
Q 017795 174 YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAIG-WPGEIYVTTVLVGLSYGAHWAIVPAAA 252 (366)
Q Consensus 174 ~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~~-~~~~l~~~~~l~G~~~g~~~~~~~~~~ 252 (366)
+.|.+++..++..+.+|.+||++|||..+ .++.+..++.+.+++.. +...+.+++++.|+.-|- .++.-+++
T Consensus 73 lGSsF~ilQ~~sS~~~G~~SD~yGRkpvl------l~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgn-l~v~rAii 145 (451)
T KOG2615|consen 73 LGSSFSILQFISSPLWGCLSDRYGRKPVL------LACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGN-LSVIRAII 145 (451)
T ss_pred HhhHHHHHHHHhhhhhhhhhhhhCchHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCc-hHHHHHHH
Confidence 78899999999999999999999998765 66666666666666643 343555669999988765 57888999
Q ss_pred HHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhh
Q 017795 253 SELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYD 289 (366)
Q Consensus 253 se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d 289 (366)
+|++++|+++.+++.++++..+|-.+ ||.++|++..
T Consensus 146 sdV~sek~r~l~ms~v~~a~~lGfil-GPmIGgyla~ 181 (451)
T KOG2615|consen 146 SDVVSEKYRPLGMSLVGTAFGLGFIL-GPMIGGYLAQ 181 (451)
T ss_pred HhhcChhhccceeeeeehhhhcchhh-cchhhhHHHh
Confidence 99999999999999999999999996 9999999987
No 178
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.88 E-value=1.1e-07 Score=93.05 Aligned_cols=170 Identities=13% Similarity=0.033 Sum_probs=108.2
Q ss_pred HHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH-H---HHHHHHHHhhhhhhh-hhhhhhhhhhccCchhHHHHHHHHH
Q 017795 140 LLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI-Y---VSMISIWNFLGRVGG-GYFSEAIVRKFAYPRPVAMAVAQVV 214 (366)
Q Consensus 140 ll~~~~~~~~~~~~~~~~~l~~i~~~~g~~~~~~-~---~sl~~i~~~~g~~~~-G~lsD~~grr~~~~R~~~~~~~~~~ 214 (366)
.++..++............+|.+.++.|++.+++ + .+++.+..++..|++ ++.+||+|||+.+ . ...+++
T Consensus 5 ~~~~ly~~~g~~~~~~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~----i-~~~~~~ 79 (390)
T TIGR02718 5 TLGLLYLSQGIPIGLAMDALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSW----V-LPMQCL 79 (390)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhH----H-HHHHHH
Confidence 3444444444444556678999999999998887 3 355566676666666 4467777775442 2 222222
Q ss_pred HHHHHHHHH---hc-chh-HHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhh
Q 017795 215 MAFALLYYA---IG-WPG-EIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYD 289 (366)
Q Consensus 215 ~~~~~~l~~---~~-~~~-~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d 289 (366)
.+.....+. .. ... .+.....+.+++...+....-++..|..+.++++...+....+..+|..+ |+.+.+++.+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~-g~~~~~~l~~ 158 (390)
T TIGR02718 80 VSACLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFG-GGAGTLVLFG 158 (390)
T ss_pred HHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 221111111 11 111 22333333445555555666667788888888888777777777888886 8888889998
Q ss_pred hhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHH
Q 017795 290 YYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVV 347 (366)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~ 347 (366)
..+ |+..|++.+++.++..+..+++.
T Consensus 159 ~~g--------------------------------w~~~f~~~a~l~~~~~~~~~~~~ 184 (390)
T TIGR02718 159 KFG--------------------------------QRPAFLLVACVPLASLVCVLWLK 184 (390)
T ss_pred HhC--------------------------------HHHHHHHHHHHHHHHHHHHHHcC
Confidence 887 99999999988877666654443
No 179
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.87 E-value=8.3e-09 Score=103.58 Aligned_cols=144 Identities=14% Similarity=0.197 Sum_probs=120.4
Q ss_pred hCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHh---cchhHHHHHHHHHHHH
Q 017795 166 LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAI---GWPGEIYVTTVLVGLS 240 (366)
Q Consensus 166 ~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~---~~~~~l~~~~~l~G~~ 240 (366)
+.+++.+- +.+.+..+..++.+.+|++.||+|-|+.+ ..+.++.+++.++... .....+++.++++|++
T Consensus 68 ~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~------~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~ 141 (466)
T KOG2532|consen 68 YDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVF------FISGLISALLTLLTPLAASIGFYLLLVLRFLQGLG 141 (466)
T ss_pred ecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHH------HHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHH
Confidence 45555443 88888999999999999999999988765 6666666666666442 2234678899999999
Q ss_pred hhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhh-hhhhhhhhhhhccCCCCCcccCCCCCCcc
Q 017795 241 YGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDY-YAEKQAGLLWKYNGNMLPVSFRDQETPTC 319 (366)
Q Consensus 241 ~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~c 319 (366)
.|..++.+..+.+...|++++++..+++..+..+|.++ +-+++|++.+. .|
T Consensus 142 ~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~-~mp~sg~lc~s~~G--------------------------- 193 (466)
T KOG2532|consen 142 QGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTII-TMPVSGLLCESSLG--------------------------- 193 (466)
T ss_pred HhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHH-HHHhHHHHhccCCC---------------------------
Confidence 99999999999999999999999999999999999996 78899999988 45
Q ss_pred cCCcchHHHHHHHHHHHHHHHHHHHHHHh
Q 017795 320 LGSICYSITCGIMAGLCIIAMVMSLIVVH 348 (366)
Q Consensus 320 ~g~~~~~~~f~i~~~~~~~~~~~~~~~~~ 348 (366)
|+.+|++.++++++-.++..++..
T Consensus 194 -----W~sifY~~g~~g~i~~~~w~~~~~ 217 (466)
T KOG2532|consen 194 -----WPSIFYVFGIVGLIWFILWFLFYS 217 (466)
T ss_pred -----CchHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999887777776655
No 180
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.85 E-value=1.2e-07 Score=91.98 Aligned_cols=149 Identities=9% Similarity=0.040 Sum_probs=87.0
Q ss_pred HHHHhhhhHHHHHHHHHHHhhhhHHHHHhcHHHHH-HHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchh
Q 017795 129 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQIC-QSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRP 205 (366)
Q Consensus 129 ~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~-~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~ 205 (366)
+++.++++.+|...+..++.......+..+.|.+. +.+|++..+. ..+...++..+++++.|+++||+++|+..
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~--- 263 (377)
T PRK11102 187 FASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNML--- 263 (377)
T ss_pred HHHHHcChHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHH---
Confidence 34566777777766665555555555556666655 4578887665 67777888899999999999999987644
Q ss_pred HHHHHHHHH---HHHHHHHHHh-c-chhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHh-hhhHHHh
Q 017795 206 VAMAVAQVV---MAFALLYYAI-G-WPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLAS-PAGSLIF 279 (366)
Q Consensus 206 ~~~~~~~~~---~~~~~~l~~~-~-~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~-~~G~~i~ 279 (366)
..+.++ .++..+.... . ......++..+.+.+.+.........+.|..| +.+|...++.+... .+|+.+
T Consensus 264 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~- 338 (377)
T PRK11102 264 ---RFGLWIQFIMGIWLVVSALLDLGFWALVVGVAAFVGCVSMISSNAMAVILDEFP-HMAGTASSLAGTLRFGIGAIV- 338 (377)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhcccc-ccchHHHHHHHHHHHHHHHHH-
Confidence 222222 2222222211 1 11222333333443444434444455667665 77888888876543 345553
Q ss_pred hhhHHH
Q 017795 280 SGVIAS 285 (366)
Q Consensus 280 gp~i~G 285 (366)
|+++++
T Consensus 339 g~~~~~ 344 (377)
T PRK11102 339 GALLSL 344 (377)
T ss_pred HHHHHh
Confidence 555443
No 181
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.84 E-value=4.5e-08 Score=96.95 Aligned_cols=166 Identities=13% Similarity=0.152 Sum_probs=107.9
Q ss_pred hcHHH-HHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH-hcch-----
Q 017795 157 DNLGQ-ICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IGWP----- 227 (366)
Q Consensus 157 ~~l~~-i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~-~~~~----- 227 (366)
.++++ +.+++|.+...+ ..++..++..+..|+.|+++||.++|+..+|+++ ..+.+..+++.+++. ..+.
T Consensus 20 ~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i-~~~~~~~~i~~~~~~~~~~~~~~~~ 98 (437)
T TIGR00792 20 TYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWL-LIGAIPFSIVLVLLFTTPDFSATGK 98 (437)
T ss_pred HHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhH-HHhHHHHHHHHHHHHhCCCCCcchH
Confidence 33444 455689988766 7888889999999999999999776655444444 444444454444433 2211
Q ss_pred -hHHHHHHHHHHHHhhhhhhhHHHHHHHhhC-CCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhhhhhhhhhhhccCC
Q 017795 228 -GEIYVTTVLVGLSYGAHWAIVPAAASELFG-LKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGN 305 (366)
Q Consensus 228 -~~l~~~~~l~G~~~g~~~~~~~~~~se~f~-~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~~~~~~~~~~~~~~ 305 (366)
...++..++.+++++.......+..+|+.. .++|+...++......+|+.+ ++.+.+.+....+..
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l-~~~~~~~l~~~~~~~----------- 166 (437)
T TIGR00792 99 LVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLL-VAVIVLPLVSYFGGG----------- 166 (437)
T ss_pred HHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCC-----------
Confidence 123344455677766655666677788864 578999999988888888886 666666665433200
Q ss_pred CCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHHhh
Q 017795 306 MLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHR 349 (366)
Q Consensus 306 ~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~ 349 (366)
....+|++.+.+.++++++..++..+..++
T Consensus 167 --------------~~~~g~~~~~~i~~~l~~~~~~~~~~~~~e 196 (437)
T TIGR00792 167 --------------DDKFGWFMFALVLALIGVVSLIICFFGTKE 196 (437)
T ss_pred --------------cccccHHHHHHHHHHHHHHHHHHHHcCCEe
Confidence 001139999998888877766655544443
No 182
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.83 E-value=9.2e-08 Score=92.22 Aligned_cols=138 Identities=17% Similarity=0.148 Sum_probs=95.3
Q ss_pred HHHhhhhH---HHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHH-HHHhhhhhhhhhhhhhhhhhccCc
Q 017795 130 PQALMKAD---FLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMIS-IWNFLGRVGGGYFSEAIVRKFAYP 203 (366)
Q Consensus 130 ~~~l~~~~---~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~~~~~~--~~sl~~-i~~~~g~~~~G~lsD~~grr~~~~ 203 (366)
++.++++. +|.+.+..++..........++|.+.+++|++..+. ..+... +...+|.+++|+++||+++|+..
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l- 278 (356)
T TIGR00901 200 REFFQRKNMIQALLLLLLIVLYKLGDSAATVLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYAL- 278 (356)
T ss_pred HHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHH-
Confidence 34445543 666655555555555566778899888899988765 343333 56778999999999999987654
Q ss_pred hhHHHHHHHHHHHHHHHHHH-h-----------cchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhH
Q 017795 204 RPVAMAVAQVVMAFALLYYA-I-----------GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLA 271 (366)
Q Consensus 204 R~~~~~~~~~~~~~~~~l~~-~-----------~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~ 271 (366)
..+.++.+++..++. . .+...+..+.++.+++.+..++...+++.|.+|++++|+.+|+.+..
T Consensus 279 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~ 353 (356)
T TIGR00901 279 -----LLFGIVQALTNAGFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSL 353 (356)
T ss_pred -----HHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHH
Confidence 333344444333322 1 11233455566778888988999999999999999999999998776
Q ss_pred hh
Q 017795 272 SP 273 (366)
Q Consensus 272 ~~ 273 (366)
.+
T Consensus 354 ~~ 355 (356)
T TIGR00901 354 SA 355 (356)
T ss_pred Hh
Confidence 54
No 183
>PRK11462 putative transporter; Provisional
Probab=98.83 E-value=2.7e-07 Score=92.85 Aligned_cols=157 Identities=8% Similarity=0.054 Sum_probs=94.2
Q ss_pred HHHhhhhHHHHHHHHHHHhhhhHHHHHhcHHHHHHHh-CCChhH-HHHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHH
Q 017795 130 PQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSL-GYADTS-IYVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVA 207 (366)
Q Consensus 130 ~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~-g~~~~~-~~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~ 207 (366)
+..++++.++.+....++.............++.+.. |..... .+.....+.+++|.+++++++||+++|+.. +
T Consensus 222 ~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~g~~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~----~ 297 (460)
T PRK11462 222 RDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWILGTPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIF----W 297 (460)
T ss_pred HHHhCChHHHHHHHHHHHHHHHHHHHHhHhhhhhhhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHH----H
Confidence 3455677776665554444443333333334444432 322222 256667788888999999999999887543 1
Q ss_pred HHHHHHHHHHHHHHHHhcc--hhHHHHHHHHHHHHhhhhhhhHHHHHHHhhC-------CCchhhHHHHHHhHhhhhHHH
Q 017795 208 MAVAQVVMAFALLYYAIGW--PGEIYVTTVLVGLSYGAHWAIVPAAASELFG-------LKSFGALYNFLTLASPAGSLI 278 (366)
Q Consensus 208 ~~~~~~~~~~~~~l~~~~~--~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~-------~~~~g~~~g~~~~~~~~G~~i 278 (366)
.........+.+++..+. ...+++..++.|++.+...++.+++++|... .+.-|..++..+...-+|..+
T Consensus 298 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~al 376 (460)
T PRK11462 298 -WTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAF 376 (460)
T ss_pred -HHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHH
Confidence 111112221222222222 2234455566777777767777777777644 555677778878888899996
Q ss_pred hhhhHHHHHhhhhh
Q 017795 279 FSGVIASGIYDYYA 292 (366)
Q Consensus 279 ~gp~i~G~l~d~~~ 292 (366)
|+.++|.+.+..|
T Consensus 377 -g~~i~g~iL~~~G 389 (460)
T PRK11462 377 -GGALIGWMLAYGG 389 (460)
T ss_pred -HHHHHHHHHHHcC
Confidence 8999999888655
No 184
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.82 E-value=7e-08 Score=92.02 Aligned_cols=137 Identities=15% Similarity=0.095 Sum_probs=99.9
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHh-cchhHHHHHHHHHHHHhhhhhhhHHHHHH
Q 017795 175 VSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAI-GWPGEIYVTTVLVGLSYGAHWAIVPAAAS 253 (366)
Q Consensus 175 ~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~-~~~~~l~~~~~l~G~~~g~~~~~~~~~~s 253 (366)
+-+.++..+-|-++.+++.||+|||+.+ +..++++++..+++.. .......+..+..-++..+.+...+.+.+
T Consensus 387 llitslaefPGlLIt~~iverlGRKkTM------al~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtP 460 (528)
T KOG0253|consen 387 LLITSLAEFPGLLITGVIVERLGRKKTM------ALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTP 460 (528)
T ss_pred HHHHHHhhCCchhHHHHHHHHhcchhHH------HHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecC
Confidence 4455677888999999999999999877 7777777776655442 33333333333344555566777888999
Q ss_pred HhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHH
Q 017795 254 ELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMA 333 (366)
Q Consensus 254 e~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~ 333 (366)
|.||++.|+++.|..+....+|+++ .|.++ ...+..- +-.. .+.+
T Consensus 461 EVyPTavRatgvGtcSsmaRIggI~-~p~iA-~~~e~s~--------------------------------sl~i-~vy~ 505 (528)
T KOG0253|consen 461 EVYPTAVRATGVGTCSSMARIGGIF-SPVIA-MRAELST--------------------------------SLPI-FVYG 505 (528)
T ss_pred cccchhhhhcchhhhhhHHhhhhhh-hhHHH-HHhccce--------------------------------eehH-HHHH
Confidence 9999999999999999999999996 89988 3333221 3333 4667
Q ss_pred HHHHHHHHHHHHHHhhcHH
Q 017795 334 GLCIIAMVMSLIVVHRTKS 352 (366)
Q Consensus 334 ~~~~~~~~~~~~~~~~~r~ 352 (366)
++++++.+++.++..++|.
T Consensus 506 ~~~ilagIavcffPiEtkG 524 (528)
T KOG0253|consen 506 ALFILAGIAVCFFPIETKG 524 (528)
T ss_pred HHHHHHHHHheeeeeccCC
Confidence 7888888888888777654
No 185
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.80 E-value=3.2e-07 Score=88.59 Aligned_cols=156 Identities=17% Similarity=0.179 Sum_probs=113.7
Q ss_pred CHHHHhhhhHHHHHHHHHHHhhhhHHHHHhcHHHHHHH-hCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCch
Q 017795 128 TLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPR 204 (366)
Q Consensus 128 ~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~-~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R 204 (366)
...++++++++++-.++.|+..+.-.+.-++++.+..+ .|.+..++ +++.+..+.++||.++-++-.|+-..+.+
T Consensus 228 ~~~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~L-- 305 (422)
T COG0738 228 GLSSLFQNKHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYL-- 305 (422)
T ss_pred hHHHHHhChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHH--
Confidence 57889999999999999999999999999999999988 78777665 88999999999998777766676433222
Q ss_pred hHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHH
Q 017795 205 PVAMAVAQVVMAFALLYYAIGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIA 284 (366)
Q Consensus 205 ~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~ 284 (366)
....++..+-++.....+....+.+.++.|+..+..|+...+...+..| ++-....+++.+ ..+|+.+ -|++.
T Consensus 306 ----af~a~~~ill~~~~~l~~g~v~~~~l~~ig~F~simfPTIfslal~~l~-~~ts~~s~~l~m-aivGGAi-iP~l~ 378 (422)
T COG0738 306 ----AFYALIAILLLLAVALIGGVVALYALFLIGLFNSIMFPTIFSLALKNLG-EHTSVGSGLLVM-AIVGGAI-IPPLQ 378 (422)
T ss_pred ----HHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHhHHHHHHHHHHHHhccC-ccccccceeeee-heecchH-HHHHH
Confidence 2222222222222223333445567778899999999999999999998 544444444444 4566665 59999
Q ss_pred HHHhhhhh
Q 017795 285 SGIYDYYA 292 (366)
Q Consensus 285 G~l~d~~~ 292 (366)
|++.|..+
T Consensus 379 G~i~d~~g 386 (422)
T COG0738 379 GVIADMFG 386 (422)
T ss_pred HHHHHhhh
Confidence 99999987
No 186
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.79 E-value=3.9e-07 Score=92.99 Aligned_cols=152 Identities=12% Similarity=0.073 Sum_probs=104.6
Q ss_pred hhhHHHHHHHHHHHhhhhHHHHHhcHHHHHHH-hCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHH
Q 017795 134 MKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAV 210 (366)
Q Consensus 134 ~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~-~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~ 210 (366)
.++....+.+..++.......+...+|.+.++ +|.+.... +.+.++++..+|.++.+++.+++.+++.+ ..
T Consensus 216 ~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv------~~ 289 (524)
T PF05977_consen 216 SSPPLRSVLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLV------LL 289 (524)
T ss_pred cchHHHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhh------HH
Confidence 34444433333333333333444567887754 67766543 67777777777777777776666554333 55
Q ss_pred HHHHHHHHHHHHHh-cchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhh
Q 017795 211 AQVVMAFALLYYAI-GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYD 289 (366)
Q Consensus 211 ~~~~~~~~~~l~~~-~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d 289 (366)
+.++.+++.+.++. .+.....+..++.|++.....+...+.+-+..|.+.+|..+++..+....+..+ |..+.|.+.|
T Consensus 290 ~~~~~a~~~~~lal~~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~l-Gsll~G~la~ 368 (524)
T PF05977_consen 290 ASLLFALALLLLALSPSFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPL-GSLLWGFLAD 368 (524)
T ss_pred HHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 56666666666664 344555667778888888877777888888899999999999999888877775 9999999999
Q ss_pred hhh
Q 017795 290 YYA 292 (366)
Q Consensus 290 ~~~ 292 (366)
..+
T Consensus 369 ~~g 371 (524)
T PF05977_consen 369 HFG 371 (524)
T ss_pred HhC
Confidence 887
No 187
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.78 E-value=4.7e-08 Score=99.27 Aligned_cols=152 Identities=13% Similarity=0.122 Sum_probs=122.1
Q ss_pred hcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHhc-chhH-HHH
Q 017795 157 DNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAIG-WPGE-IYV 232 (366)
Q Consensus 157 ~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~~-~~~~-l~~ 232 (366)
...+.+.++++.+..++ ..++......+..|+.+.+.||+|.|... .++.++.++|+++-.+. +.+. .+.
T Consensus 67 v~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~------i~G~~v~~~g~~lssF~~~i~~l~lt 140 (509)
T KOG2504|consen 67 LLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVM------IAGGLVAALGLLLSSFATSLWQLYLT 140 (509)
T ss_pred hhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHH------HHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 44667778888776644 78888888888999999999999988765 77888888888776643 3333 445
Q ss_pred HHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhhhhhhhhhhhccCCCCCcccC
Q 017795 233 TTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFR 312 (366)
Q Consensus 233 ~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~~~~~~~~~~~~~~~~~~~~~ 312 (366)
..++.|+|.|..+.....++..+| .|+|+.+.|+...+.++|.+++ |.+.-++.+..|
T Consensus 141 ~gvi~G~G~~~~~~paiviv~~YF-~kkR~lA~Gia~~GsG~G~~~~-~~l~~~l~~~~G-------------------- 198 (509)
T KOG2504|consen 141 FGVIGGLGLGLIYLPAVVILGTYF-EKKRALATGIAVSGTGVGTVVF-PPLLKYLLSKYG-------------------- 198 (509)
T ss_pred HHHHhhccchhhhcchhhhhhhHh-HHHHHHHHhhhhccCCcceeeH-HHHHHHHHHHhC--------------------
Confidence 677889999998888888888777 7889999999999999999986 888999999998
Q ss_pred CCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHHh
Q 017795 313 DQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVH 348 (366)
Q Consensus 313 ~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~ 348 (366)
||+++++.+.+++-.++......+
T Consensus 199 ------------~r~~~l~~~~~~l~~~~~~~~~rp 222 (509)
T KOG2504|consen 199 ------------WRGALLIFGGISLNVLVAGALLRP 222 (509)
T ss_pred ------------cHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999888666655555433
No 188
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.76 E-value=4.1e-07 Score=89.04 Aligned_cols=155 Identities=12% Similarity=0.074 Sum_probs=96.3
Q ss_pred HHHHhhhhHHHHHHHHHHHhhhhHHHHHhcHHHHHHH-hCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchh
Q 017795 129 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRP 205 (366)
Q Consensus 129 ~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~-~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~ 205 (366)
+++.++++.+|...+..++.......+....+.+.++ +|++.... ......++..++.++.+++.||++++.
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~----- 274 (394)
T PRK11652 200 YRTLLSNRRFNCYLLMLIGTLAGIAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLM----- 274 (394)
T ss_pred HHHHHcChHHHHHHHHHHHHHHHHHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----
Confidence 4556778888765555444433333344455666665 78887654 344445555566666677777665321
Q ss_pred HHHHHHHHHHHHHHHHHHh---cchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhh
Q 017795 206 VAMAVAQVVMAFALLYYAI---GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGV 282 (366)
Q Consensus 206 ~~~~~~~~~~~~~~~l~~~---~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~ 282 (366)
.......++..+....... .+...++...++.|++.+...+...+...|.++ +++|+..++.+....+|+.+ ++.
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~-~~~ 352 (394)
T PRK11652 275 WQSVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGL-AAL 352 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHH-HHH
Confidence 1112222222222222221 233445666778888888888888888888885 67899999999999999996 899
Q ss_pred HHHHHhhh
Q 017795 283 IASGIYDY 290 (366)
Q Consensus 283 i~G~l~d~ 290 (366)
++|++.+.
T Consensus 353 ~~~~~~~~ 360 (394)
T PRK11652 353 LSAMLPQT 360 (394)
T ss_pred HHHHccCC
Confidence 88887654
No 189
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.75 E-value=6.7e-07 Score=87.97 Aligned_cols=129 Identities=12% Similarity=-0.024 Sum_probs=82.9
Q ss_pred HHhcHHHHHH-HhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHhc-chhHH
Q 017795 155 VIDNLGQICQ-SLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAIG-WPGEI 230 (366)
Q Consensus 155 ~~~~l~~i~~-~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~~-~~~~l 230 (366)
....+|.+.+ .+|++..+. ..+...++..+|.+..+++.|+.++++.. ..+.+ +++..+++... +....
T Consensus 224 ~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~------~~g~~-~~~~~~~~~~~~~~~~~ 296 (393)
T PRK11195 224 LRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVL------PAGIL-MGLVVLLMALQHSLLPA 296 (393)
T ss_pred HHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchH------HHHHH-HHHHHHHHHHHhHHHHH
Confidence 3344555554 468877665 66777778888888888888876654322 33332 23333333322 23334
Q ss_pred HHHHHHHHHHhhhhhhhHHHHHHHhhCCCc-hhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhh
Q 017795 231 YVTTVLVGLSYGAHWAIVPAAASELFGLKS-FGALYNFLTLASPAGSLIFSGVIASGIYDYYA 292 (366)
Q Consensus 231 ~~~~~l~G~~~g~~~~~~~~~~se~f~~~~-~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~ 292 (366)
.+..++.|++.+...+...+.+.+.-+.+. +|.+.++.++...+|..+ +..+.+.+ +..+
T Consensus 297 ~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~-~~~~~~~~-~~~~ 357 (393)
T PRK11195 297 YPLLILIGALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLL-MLGLYSLL-VKLG 357 (393)
T ss_pred HHHHHHHHHhhhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHH-HHHHHHHH-HHcC
Confidence 456667888877766666777777544433 699999999999999996 88888855 5555
No 190
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.73 E-value=4.5e-07 Score=90.22 Aligned_cols=155 Identities=16% Similarity=0.133 Sum_probs=106.9
Q ss_pred HHhhhhHHHHHHHHHHHhhhhHHHHHhcHHHHHHH-hCCChhHH-HHHHHHHHH-hhhhhhhhhhhhhhhhhccCchhHH
Q 017795 131 QALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI-YVSMISIWN-FLGRVGGGYFSEAIVRKFAYPRPVA 207 (366)
Q Consensus 131 ~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~-~g~~~~~~-~~sl~~i~~-~~g~~~~G~lsD~~grr~~~~R~~~ 207 (366)
..++|+.+..+.+++++...........+.++.+. +|.++... .....+.+. ..+.+++..+++|+|+|+.+
T Consensus 231 ~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~----- 305 (467)
T COG2211 231 LIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLF----- 305 (467)
T ss_pred HHHccchHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHH-----
Confidence 45677777766666666555444444444444443 45555444 333334444 44588999999999998776
Q ss_pred HHHHHHHHHHHHHHHH-h--cchhHHHHHHHHHHHHhhhhhhhHHHHHHHhh-------CCCchhhHHHHHHhHhhhhHH
Q 017795 208 MAVAQVVMAFALLYYA-I--GWPGEIYVTTVLVGLSYGAHWAIVPAAASELF-------GLKSFGALYNFLTLASPAGSL 277 (366)
Q Consensus 208 ~~~~~~~~~~~~~l~~-~--~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f-------~~~~~g~~~g~~~~~~~~G~~ 277 (366)
..+.++.+++.+++. . .+...+++..++.+++.+...++.+++++|.. |.+.-|..++.+....=+|..
T Consensus 306 -~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~a 384 (467)
T COG2211 306 -LIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLA 384 (467)
T ss_pred -HHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHH
Confidence 555666666555543 2 23445667778889999999999999998764 455688999999999999999
Q ss_pred HhhhhHHHHHhhhhh
Q 017795 278 IFSGVIASGIYDYYA 292 (366)
Q Consensus 278 i~gp~i~G~l~d~~~ 292 (366)
+ +..+.|++.+..|
T Consensus 385 l-a~~~~g~~L~~~G 398 (467)
T COG2211 385 L-AGFIPGWILGAIG 398 (467)
T ss_pred H-HHHHHHHHHHHcC
Confidence 6 8888999988776
No 191
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.71 E-value=9.8e-07 Score=84.23 Aligned_cols=154 Identities=17% Similarity=0.177 Sum_probs=125.9
Q ss_pred HHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHhcchhHHH
Q 017795 154 TVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAIGWPGEIY 231 (366)
Q Consensus 154 ~~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~~~~~~l~ 231 (366)
.+-..++++-+++|.+.+.+ ..+++.++..+..++..++..|+|.++.+ ..++++.++|.++=.......++
T Consensus 30 svgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l------~~~Llli~~G~~iR~~~~~~~L~ 103 (395)
T COG2807 30 SVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSL------FLALLLIAAGILIRSLGGLPLLF 103 (395)
T ss_pred hhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHH------HHHHHHHHHHHHHHhcccHHHHH
Confidence 34456778888899988776 88999999999999999999999987655 77777777777765545667789
Q ss_pred HHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhhhhhhhhhhhccCCCCCccc
Q 017795 232 VTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSF 311 (366)
Q Consensus 232 ~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~~~~~~~~~~~~~~~~~~~~ 311 (366)
.+..+.|+|.+....+.|+.+-+.|| |+.+..+|++.+...+|+.+ ++.++-.+.+..+
T Consensus 104 ~gt~l~G~gIav~nVLLPslIK~~Fp-k~~~~mtglYs~sl~~~aaL-aa~lavpla~~~~------------------- 162 (395)
T COG2807 104 LGTLLAGAGIAVINVLLPSLIKRDFP-KRVGLMTGLYSTSLGAGAAL-AAALAVPLAQHSG------------------- 162 (395)
T ss_pred HHHHHHHhhHHHHHHhhhHHHHhhcc-cchhhHHhHHHHHHHHHHHH-HhhhhhHHHHhhc-------------------
Confidence 99999999999999999999999995 67788999999998888885 7776666666553
Q ss_pred CCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHH
Q 017795 312 RDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIV 346 (366)
Q Consensus 312 ~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~ 346 (366)
+|+.+..+.+..++++.++.+.-
T Consensus 163 ------------gW~~aL~~WAl~allAl~~WlPq 185 (395)
T COG2807 163 ------------GWRGALGFWALLALLALLIWLPQ 185 (395)
T ss_pred ------------cHHHHHHHHHHHHHHHHHHHhhh
Confidence 39999999999988877766554
No 192
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.71 E-value=1.5e-07 Score=94.96 Aligned_cols=153 Identities=14% Similarity=0.196 Sum_probs=115.4
Q ss_pred HHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHh
Q 017795 164 QSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAIGWPGEIYVTTVLVGLSY 241 (366)
Q Consensus 164 ~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~l~G~~~ 241 (366)
++.++..... ..+++.++.++|.+.+|.+.||+.- .......+.+...++.+-....+...+++.+++.|+.-
T Consensus 74 edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~l-----s~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~e 148 (495)
T KOG2533|consen 74 EDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPL-----SKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFE 148 (495)
T ss_pred cccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCCh-----HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh
Confidence 4444443333 8889999999999999999999972 22222333333333333333556678889999999999
Q ss_pred hhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhhhhhhhhhhhccCCCCCcccCCCCCCcccC
Q 017795 242 GAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLG 321 (366)
Q Consensus 242 g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g 321 (366)
++.|+....+++..|+.+++|...++.+....+|+.+ |++++..++...+. .+
T Consensus 149 s~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~-ggliA~g~~~~~~~--------------------------~~ 201 (495)
T KOG2533|consen 149 SGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIF-GGLIAYGVFKLNGS--------------------------GG 201 (495)
T ss_pred cccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHH-HHHHHHHhhhhcCC--------------------------CC
Confidence 9999999999999999999999999999999999995 88888887654331 01
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHh
Q 017795 322 SICYSITCGIMAGLCIIAMVMSLIVVH 348 (366)
Q Consensus 322 ~~~~~~~f~i~~~~~~~~~~~~~~~~~ 348 (366)
..+|+|.|.+.++++++..++.+++.+
T Consensus 202 ~~gW~~~FiI~G~i~~~~gi~~f~~lp 228 (495)
T KOG2533|consen 202 LAGWRWLFIIEGVITLVLGIVVFFFLP 228 (495)
T ss_pred cCCceeehhHHHHHHHHHHheEEEEec
Confidence 124999999999999887777766544
No 193
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.65 E-value=8.5e-07 Score=89.48 Aligned_cols=174 Identities=18% Similarity=0.149 Sum_probs=110.4
Q ss_pred HHHHHHHHHHhhhhHHHHHhcHHHHHH-HhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHH
Q 017795 138 FLLLFFSLVLASGSGLTVIDNLGQICQ-SLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVV 214 (366)
Q Consensus 138 ~~ll~~~~~~~~~~~~~~~~~l~~i~~-~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~ 214 (366)
..++...++..... ......++.+.+ ++|.+.+++ +.++..+.-.+ .+++|.++|+++. ...+|++++.++.++
T Consensus 28 ~~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~-K~l~g~l~D~~~i-~G~rRr~~l~~~~~l 104 (468)
T TIGR00788 28 LAIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWAL-KPFAGVMSDTFPL-FGYTKRWYLVLSGLL 104 (468)
T ss_pred HHHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHhcCC-CCccchHHHHHHHHH
Confidence 34444455555555 334444555554 689998876 55666655554 6669999999962 233455565666655
Q ss_pred H-HHHHHHHHhc-chhHH-HHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhh---HHHHHHhHhhhhHHHhhhhHHHHHh
Q 017795 215 M-AFALLYYAIG-WPGEI-YVTTVLVGLSYGAHWAIVPAAASELFGLKSFGA---LYNFLTLASPAGSLIFSGVIASGIY 288 (366)
Q Consensus 215 ~-~~~~~l~~~~-~~~~l-~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~---~~g~~~~~~~~G~~i~gp~i~G~l~ 288 (366)
. ++++..++.. +.... .+..++.+++.+.+....-++..|..+ ++.+. ..+.......+|..+ |+.++|.+.
T Consensus 105 ~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~v-g~~l~G~l~ 182 (468)
T TIGR00788 105 GSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLI-SSLLGGPLL 182 (468)
T ss_pred HHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHH-HHHHHHHHH
Confidence 5 3333333322 22223 336677888888888888889999987 44333 334444445578886 999999999
Q ss_pred hhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHHhh
Q 017795 289 DYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHR 349 (366)
Q Consensus 289 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~ 349 (366)
+..+ |+..|++.+++.++..+.. .+.++
T Consensus 183 ~~~~--------------------------------~~~~f~~~a~l~ll~~~~~-~~~~E 210 (468)
T TIGR00788 183 DKTL--------------------------------TRILFLITAALLLLQLFVS-NLSKE 210 (468)
T ss_pred HhcC--------------------------------cchHHHHHHHHHHHHHHHH-Hhccc
Confidence 8877 9999999988877764333 33344
No 194
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.60 E-value=3.9e-07 Score=89.24 Aligned_cols=108 Identities=18% Similarity=0.240 Sum_probs=85.0
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHh----cch----hHHHHHHHHHHHHhhhhh
Q 017795 174 YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAI----GWP----GEIYVTTVLVGLSYGAHW 245 (366)
Q Consensus 174 ~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~----~~~----~~l~~~~~l~G~~~g~~~ 245 (366)
......+++++|+++.|++.|++|||+.+ ...++++.++.++.+. ..+ ..+...+++.|+|.|+-+
T Consensus 89 Vn~~A~vGti~GQl~FG~lgD~~GRK~vY------G~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDY 162 (538)
T KOG0252|consen 89 VNAAALVGTIFGQLFFGWLGDKFGRKKVY------GKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDY 162 (538)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcchhhh------hHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCC
Confidence 66677789999999999999999999988 5566666666554432 112 356678999999999999
Q ss_pred hhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHh
Q 017795 246 AIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIY 288 (366)
Q Consensus 246 ~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~ 288 (366)
++..++++|.--.+.||+..+.+.....+|... |.+++-.+.
T Consensus 163 PlSAtI~SE~an~~~RGa~iaavFa~Qg~Gila-G~ivt~Iv~ 204 (538)
T KOG0252|consen 163 PLSATIMSESANKKTRGAFIAAVFAMQGFGILA-GGIVALIVS 204 (538)
T ss_pred cchHHHhhhhhhhccccceeEEEEEecchhHhh-ccHHHHHHH
Confidence 999999999998899999999888887777773 665554443
No 195
>PRK09669 putative symporter YagG; Provisional
Probab=98.55 E-value=1.5e-06 Score=86.79 Aligned_cols=163 Identities=15% Similarity=0.112 Sum_probs=100.4
Q ss_pred hcHHH-HHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHH-HHhcc----h-
Q 017795 157 DNLGQ-ICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLY-YAIGW----P- 227 (366)
Q Consensus 157 ~~l~~-i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l-~~~~~----~- 227 (366)
.+++. +.+.+|.+...+ ..++.-++..+..|+.|+++||...|...+|++++.. .+..+++..+ +..++ .
T Consensus 30 ~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~-~~~~~i~~~l~f~~p~~~~~~~ 108 (444)
T PRK09669 30 LFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWF-AIPFGVVCLLTFYTPDFGATGK 108 (444)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHH-HHHHHHHHHHHHhCCCCCcchH
Confidence 33444 456689988766 7788888999999999999999776666556655443 3333333332 32221 1
Q ss_pred -hHHHHHHHHHHHHhhhhhhhHHHHHHHhh-CCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhhhhhhhhhhhccCC
Q 017795 228 -GEIYVTTVLVGLSYGAHWAIVPAAASELF-GLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGN 305 (366)
Q Consensus 228 -~~l~~~~~l~G~~~g~~~~~~~~~~se~f-~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~~~~~~~~~~~~~~ 305 (366)
...++..++.+.++........++.+|+. ..++|+...+.-.....+|+.+ ++.+...+....+...
T Consensus 109 ~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i-~~~~~~pl~~~~~~~~---------- 177 (444)
T PRK09669 109 IIYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLI-VSVIALPLVDILGKGD---------- 177 (444)
T ss_pred HHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCCc----------
Confidence 12223334556666666666677888987 4467888888877777777775 5555444443332100
Q ss_pred CCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHH
Q 017795 306 MLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIV 346 (366)
Q Consensus 306 ~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~ 346 (366)
...+|+..+.+.++++.+..+++++.
T Consensus 178 ---------------~~~g~~~~~~i~~ii~~v~~~~~~~~ 203 (444)
T PRK09669 178 ---------------EQKGYFYAMMVMGLLGVVLFFCCFFM 203 (444)
T ss_pred ---------------hhhhHHHHHHHHHHHHHHHHHHHhCC
Confidence 00138888888887777666555443
No 196
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.55 E-value=1e-06 Score=84.89 Aligned_cols=183 Identities=13% Similarity=0.077 Sum_probs=115.7
Q ss_pred CCCHHHHhhhhHHHHHHHHHHHhhhhHHHHHhcHHHHH-HHhCCChh-HH--HHHHHHHHHhhhhhhhhhhhhhhhhhcc
Q 017795 126 DFTLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQIC-QSLGYADT-SI--YVSMISIWNFLGRVGGGYFSEAIVRKFA 201 (366)
Q Consensus 126 ~~~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~-~~~g~~~~-~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~ 201 (366)
+.++++++++|..|+..++......+....-..++.++ +.+. ++. +. ..-..++...+|..+.|.++||++.-
T Consensus 260 ~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~-~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~-- 336 (464)
T KOG3764|consen 260 GTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMF-TPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHL-- 336 (464)
T ss_pred CccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHhcc-CCCcceeeeecccccchhccCchHHHHHHhcCch--
Confidence 34578888999888776665444444444555566644 3344 322 22 22234556778999999999999731
Q ss_pred CchhHHHHHHHHHHHHHHHHHH-hcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCC------chhhHHHHHHhHhhh
Q 017795 202 YPRPVAMAVAQVVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLK------SFGALYNFLTLASPA 274 (366)
Q Consensus 202 ~~R~~~~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~------~~g~~~g~~~~~~~~ 274 (366)
|-...+.+++..++...... ..+...+++-.+..+++.+...+.+..+...+...+ .+|..|++...+..+
T Consensus 337 --~wl~~~~gl~~~G~~~~~iP~~~~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sl 414 (464)
T KOG3764|consen 337 --RWLLSLGGLATVGVSSGPIPFATSIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSL 414 (464)
T ss_pred --hHHHHHHHHHHHHHHhchhHhhhhHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHH
Confidence 21122333333333222222 233344555555555665555555554555444433 589999999999999
Q ss_pred hHHHhhhhHHHHHhhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHH
Q 017795 275 GSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIV 346 (366)
Q Consensus 275 G~~i~gp~i~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~ 346 (366)
|.++ ||.++|.+++..| |+|...+.+...++-+-+...+
T Consensus 415 a~a~-GP~~gg~iv~~iG--------------------------------F~wl~~iig~~n~iyapvl~ll 453 (464)
T KOG3764|consen 415 AYAI-GPTFGGSLVEAIG--------------------------------FEWLMTIIGILNLIYAPVLLLL 453 (464)
T ss_pred hhhc-cccccchheeehh--------------------------------HHHHHHHHHHHHHHHHHHHHHH
Confidence 9996 9999999999888 9999988888887766554443
No 197
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.54 E-value=1.9e-07 Score=91.39 Aligned_cols=176 Identities=14% Similarity=0.067 Sum_probs=116.5
Q ss_pred HHHHHhhhhHHHHHhcHHHHHHHhCCChhHH----------HHHHHHHHHhh-hhhhhhhhhhhhhhhccCchhHHHHHH
Q 017795 143 FSLVLASGSGLTVIDNLGQICQSLGYADTSI----------YVSMISIWNFL-GRVGGGYFSEAIVRKFAYPRPVAMAVA 211 (366)
Q Consensus 143 ~~~~~~~~~~~~~~~~l~~i~~~~g~~~~~~----------~~sl~~i~~~~-g~~~~G~lsD~~grr~~~~R~~~~~~~ 211 (366)
...|..-.+.+...-+...+.+..|+.+... ...+...+..+ |-.+..+++|++|||+.. ..+
T Consensus 311 ~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq------~~G 384 (538)
T KOG0252|consen 311 GTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQ------LMG 384 (538)
T ss_pred HHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHH------Hhh
Confidence 3344444455555666777888888754321 23333444444 777888999999998766 777
Q ss_pred HHHHHHHHHHHHhcch------hHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHH
Q 017795 212 QVVMAFALLYYAIGWP------GEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIAS 285 (366)
Q Consensus 212 ~~~~~~~~~l~~~~~~------~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G 285 (366)
++++.+.++.++.... ..+....+..-++.-+..+....+.+|.||.+.||+.+|+....+-.|+.+ |...++
T Consensus 385 F~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAiv-g~~~F~ 463 (538)
T KOG0252|consen 385 FFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIV-GAFGFL 463 (538)
T ss_pred HHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHH-HHHHhh
Confidence 7777777666653322 112222222233333445556667899999999999999999999999996 877666
Q ss_pred HHhhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHHhhcHHH
Q 017795 286 GIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHRTKSV 353 (366)
Q Consensus 286 ~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~~r~~ 353 (366)
++.++.- +.+. .++++|++.++++.++.+..+++. +++++
T Consensus 464 ~~t~~~y-------p~~~--------------------g~~~v~~i~~~~~~~gi~~T~l~p-Etk~~ 503 (538)
T KOG0252|consen 464 YLTDHNY-------PPNI--------------------GVRNVFIILAGCMLLGILFTLLIP-ETKGK 503 (538)
T ss_pred HhhhccC-------Cccc--------------------cchHHHHHHHHHHHHhHheeEEee-ccccc
Confidence 6666321 1111 289999999999999888887766 65543
No 198
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.48 E-value=5.3e-06 Score=80.34 Aligned_cols=130 Identities=9% Similarity=-0.022 Sum_probs=107.0
Q ss_pred HHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH----hcch
Q 017795 154 TVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA----IGWP 227 (366)
Q Consensus 154 ~~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~----~~~~ 227 (366)
.....+|++.+.++.+..++ .-..+..+.+++.+-.|++.+|+|.|..+ ..++.+++++..++. ..+.
T Consensus 31 l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi------~lgL~l~avg~~lF~pAa~~~~y 104 (422)
T COG0738 31 LNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGI------VLGLLLYAVGAALFWPAASSKSY 104 (422)
T ss_pred cchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHH------HHHHHHHHHHHHHHhhhhhhhhH
Confidence 34456788888898887766 45555566778888999999999999887 889999999988874 2233
Q ss_pred hHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhh
Q 017795 228 GEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDY 290 (366)
Q Consensus 228 ~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~ 290 (366)
..++.+.++.|.|.|..-+...++++.+.+++.-....++.....++|+.+ +|.+++++.++
T Consensus 105 ~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~-gp~~g~~lils 166 (422)
T COG0738 105 GFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAIL-GPLLGSSLILS 166 (422)
T ss_pred HHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHH-HHHHHHHHHHh
Confidence 456677788899999888888999999998888888999999999999997 99999999884
No 199
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.47 E-value=2.6e-05 Score=78.85 Aligned_cols=143 Identities=15% Similarity=0.124 Sum_probs=101.1
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhhcc-CchhHHHHHHHHHHHHHHHHHHh----------cchhHHHHHHHHHHHHhh
Q 017795 174 YVSMISIWNFLGRVGGGYFSEAIVRKFA-YPRPVAMAVAQVVMAFALLYYAI----------GWPGEIYVTTVLVGLSYG 242 (366)
Q Consensus 174 ~~sl~~i~~~~g~~~~G~lsD~~grr~~-~~R~~~~~~~~~~~~~~~~l~~~----------~~~~~l~~~~~l~G~~~g 242 (366)
+.++-.+.-.+..++..++-.++.||.. .....-+.+++++.+++++..+. .+...+.+..++.++|-.
T Consensus 317 ~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~ 396 (475)
T TIGR00924 317 FQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGEL 396 (475)
T ss_pred HHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHH
Confidence 5555566666666655544445555422 12222246677777777665442 245567788889999999
Q ss_pred hhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCC
Q 017795 243 AHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGS 322 (366)
Q Consensus 243 ~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~ 322 (366)
...+...+.+++..|++.+|+.+|+..+...+|..+ ++.+.+...+..+
T Consensus 397 ~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l-~~~~~~~~~~~~~------------------------------ 445 (475)
T TIGR00924 397 MISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLL-GGYLATFGAVPQG------------------------------ 445 (475)
T ss_pred HHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcccc------------------------------
Confidence 999999999999999999999999999999999996 8888887766554
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHhh
Q 017795 323 ICYSITCGIMAGLCIIAMVMSLIVVHR 349 (366)
Q Consensus 323 ~~~~~~f~i~~~~~~~~~~~~~~~~~~ 349 (366)
|...|...++++++..++.+++.++
T Consensus 446 --~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (475)
T TIGR00924 446 --VTGVFGKIGLVTLLVGVVMALMVPW 470 (475)
T ss_pred --hhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777877777777666665555443
No 200
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.43 E-value=3.5e-06 Score=84.54 Aligned_cols=101 Identities=23% Similarity=0.307 Sum_probs=81.3
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHH--HH--hcchhHHHHHHHHHHHHhhhhhhhHH
Q 017795 174 YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLY--YA--IGWPGEIYVTTVLVGLSYGAHWAIVP 249 (366)
Q Consensus 174 ~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l--~~--~~~~~~l~~~~~l~G~~~g~~~~~~~ 249 (366)
.++.+.+++++|....|+++|++|||..+ .+..++..++.++ +. ......+.+++++.|+..|......+
T Consensus 65 ~vs~f~iG~~~Gs~~~~~la~~~GRK~~l------~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~p 138 (485)
T KOG0569|consen 65 IVSIFFIGGMIGSFSSGLLADRFGRKNAL------LLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVP 138 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcchHHH------HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHH
Confidence 79999999999999999999999999655 3333333332222 22 34556788999999999999999999
Q ss_pred HHHHHhhCCCchhhHHHHHHhHhhhhHHHhhh
Q 017795 250 AAASELFGLKSFGALYNFLTLASPAGSLIFSG 281 (366)
Q Consensus 250 ~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp 281 (366)
-++.|.-|.+.||..-.+..++..+|..+ |.
T Consensus 139 myl~E~sP~~~RG~~g~~~~~~~~~g~ll-~~ 169 (485)
T KOG0569|consen 139 MYLTEISPKNLRGALGTLLQIGVVIGILL-GQ 169 (485)
T ss_pred HHHhhcChhhhccHHHHHHHHHHHHHHHH-HH
Confidence 99999999999999998888888888885 53
No 201
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=98.42 E-value=4.8e-06 Score=82.69 Aligned_cols=121 Identities=16% Similarity=0.126 Sum_probs=72.6
Q ss_pred HHhcHHHHH-HHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH-hcchhHH
Q 017795 155 VIDNLGQIC-QSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IGWPGEI 230 (366)
Q Consensus 155 ~~~~l~~i~-~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~-~~~~~~l 230 (366)
....++.+. +++|++..++ +.+...++..++.+.+|+++||+|||+.. +.++.++..++..+.. ..+...+
T Consensus 21 ~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 95 (418)
T TIGR00889 21 WLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKV-----YAVCHFAGALLLFFAAQVTTPAGM 95 (418)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHH-----HHHHHHHHHHHHHHHHHhcCHHHH
Confidence 334444544 5589998776 78999999999999999999999763321 2344444444444433 3445556
Q ss_pred HHHHHHHHHHhhhhhhhHHHHHHHh--------hCCCchhhHHHHHHhHhhhhHHHhhhhHHHHH
Q 017795 231 YVTTVLVGLSYGAHWAIVPAAASEL--------FGLKSFGALYNFLTLASPAGSLIFSGVIASGI 287 (366)
Q Consensus 231 ~~~~~l~G~~~g~~~~~~~~~~se~--------f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l 287 (366)
++..++.|++.+...++.-++.... .....+.+.+| .+|..+ ||.++|.+
T Consensus 96 ~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~i-g~~l~g~l 153 (418)
T TIGR00889 96 FPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIA-AMWAVSLL 153 (418)
T ss_pred HHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHH-HHHHHHHh
Confidence 6666777777665555444432222 11112333333 356664 78888876
No 202
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.41 E-value=3.1e-05 Score=76.75 Aligned_cols=158 Identities=12% Similarity=-0.025 Sum_probs=88.4
Q ss_pred HHHHhhhhHHHHHHHHHHHhhhhHHHHHhcHHHHHHH-hCCChhHH--HHHHHHHHHhhhhhhhhhhh-hhhhhhccCch
Q 017795 129 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFS-EAIVRKFAYPR 204 (366)
Q Consensus 129 ~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~-~g~~~~~~--~~sl~~i~~~~g~~~~G~ls-D~~grr~~~~R 204 (366)
+++.++++.+|...+.+++.......+....|.+.++ +|++..+. .......+..++..+.+.+. |+.++|.....
T Consensus 211 ~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~ 290 (413)
T PRK15403 211 FRNVFRNRLFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRA 290 (413)
T ss_pred HHHHHcCHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHH
Confidence 4567889999988777777666666677778888876 48887765 22233444455555555433 33322211000
Q ss_pred hHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhC-CCchhhHHHHHHhHhhhhHHHhhhhH
Q 017795 205 PVAMAVAQVVMAFALLYYAIGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFG-LKSFGALYNFLTLASPAGSLIFSGVI 283 (366)
Q Consensus 205 ~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~-~~~~g~~~g~~~~~~~~G~~i~gp~i 283 (366)
.....++.+++.++... ...+....++..+++++|.+...+...... +.+ ....|++.++.+.....+..+ ++.+
T Consensus 291 ~~~~~ig~~l~~~~~~~-~~~~~~~~~~~~~l~~~G~~~~~p~~~~~a--l~~~~~~~G~a~a~~~~~~~~~~~~-~~~~ 366 (413)
T PRK15403 291 VPIQLVGLALLIVGNLL-WPHVWLWSVLGTSLYAFGIGLIFPTLFRFT--LFSNNLPKGTVSASLNMVILMVMAV-SVEI 366 (413)
T ss_pred HHHHHHHHHHHHHHHHH-ccccHHHHHHHHHHHHHHHHHHhHHHHHHH--hccCCCCCcHHHHHHHHHHHHHHHH-HHHH
Confidence 00111122222111111 111112245666777888777665555322 222 224788888888887777775 8888
Q ss_pred HHHHhhh
Q 017795 284 ASGIYDY 290 (366)
Q Consensus 284 ~G~l~d~ 290 (366)
.|++++.
T Consensus 367 ~g~~~~~ 373 (413)
T PRK15403 367 GRWLWFN 373 (413)
T ss_pred HHHHHHc
Confidence 8888776
No 203
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.41 E-value=6.6e-06 Score=86.05 Aligned_cols=150 Identities=20% Similarity=0.301 Sum_probs=109.7
Q ss_pred HHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhh-hhhccCchhHHHHHHHHHHHHHHHHHHhcc---------hhHH
Q 017795 163 CQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAI-VRKFAYPRPVAMAVAQVVMAFALLYYAIGW---------PGEI 230 (366)
Q Consensus 163 ~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~-grr~~~~R~~~~~~~~~~~~~~~~l~~~~~---------~~~l 230 (366)
...+|++.+.+ ....+.....+..+++|+++|++ |+++.+ ..+.++..+|+.+++... ....
T Consensus 15 ~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tI------l~~~ii~~lG~~llai~a~~~~~~~~~~~~~ 88 (654)
T TIGR00926 15 LNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTI------LYLSIVYVVGHALLSFGAIPSSGHPLHDLLD 88 (654)
T ss_pred HHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH------HHHHHHHHHHHHHHHhccCcccccchHHHHH
Confidence 44578877655 55666666677888999999996 665444 666677777777765321 1235
Q ss_pred HHHHHHHHHHhhhhhhhHHHHHHHhhCCC---chhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhhhhhhhhhhhccCCCC
Q 017795 231 YVTTVLVGLSYGAHWAIVPAAASELFGLK---SFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNML 307 (366)
Q Consensus 231 ~~~~~l~G~~~g~~~~~~~~~~se~f~~~---~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~~~~~~~~~~~~~~~~ 307 (366)
+++..+..+|.|+.-+...+...|.|..+ .+-..+++...+.++|+++ ++++.+++.+..+
T Consensus 89 l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSli-s~~i~~~l~~~~~--------------- 152 (654)
T TIGR00926 89 LLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLI-STIITPILRGDVG--------------- 152 (654)
T ss_pred HHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhc---------------
Confidence 66777888899998899999999999754 3778899999999999996 8999988865432
Q ss_pred CcccCCCCCCcccC-CcchHHHHHHHHHHHHHHHHHHHH
Q 017795 308 PVSFRDQETPTCLG-SICYSITCGIMAGLCIIAMVMSLI 345 (366)
Q Consensus 308 ~~~~~~~~~~~c~g-~~~~~~~f~i~~~~~~~~~~~~~~ 345 (366)
|.| ..||..+|.+.+++.+++.++...
T Consensus 153 -----------~fg~~~~~~~aF~i~~i~m~ia~lvf~~ 180 (654)
T TIGR00926 153 -----------CFGCQDCYPLAFGVPAILMILALIVFMA 180 (654)
T ss_pred -----------ccccCcchHHHHHHHHHHHHHHHHHHHH
Confidence 222 235999999988888777665544
No 204
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.38 E-value=4e-10 Score=112.24 Aligned_cols=161 Identities=16% Similarity=0.171 Sum_probs=106.3
Q ss_pred HHhcHHHHHHHhCCChhHHHHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH------hcc--
Q 017795 155 VIDNLGQICQSLGYADTSIYVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA------IGW-- 226 (366)
Q Consensus 155 ~~~~l~~i~~~~g~~~~~~~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~------~~~-- 226 (366)
...+.+.+.+..|.+.......+..+...++.+++.++.||+|||+.. ..+..+++++.+.+. ...
T Consensus 272 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~------i~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (451)
T PF00083_consen 272 IFYYSPSIFENAGISNSFLATLILGLVNFLGTLLAIFLIDRFGRRKLL------IIGLLLMAICSLILGIIFFLGVSSSS 345 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccc------cccccccccccccccccccccccccc
Confidence 344567777778877663344455567777888888999999999766 444444444333321 111
Q ss_pred --hhHHHHHHHHHHHHhh-hhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhhhhhhhhhhhcc
Q 017795 227 --PGEIYVTTVLVGLSYG-AHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYN 303 (366)
Q Consensus 227 --~~~l~~~~~l~G~~~g-~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~~~~~~~~~~~~ 303 (366)
....++...+...+++ +..++.+.+++|+||++.|+++.++....+.+++++ +|.+...+.+..+
T Consensus 346 ~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i-~~~~~~~~~~~~~----------- 413 (451)
T PF00083_consen 346 WWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFI-IPFLFPYLFNNLG----------- 413 (451)
T ss_pred ccccccceeeeeccccccccccccccccccccccccccccccccccccccccccc-ccccccccccccc-----------
Confidence 1112222222222333 334555678899999999999999999999999986 7888777776554
Q ss_pred CCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHHhhcHHHH
Q 017795 304 GNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHRTKSVY 354 (366)
Q Consensus 304 ~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~~r~~~ 354 (366)
....|++.+++++++.+...++.++||.+.
T Consensus 414 ---------------------~~~~~~i~~~~~~i~~i~~~~~lpET~g~~ 443 (451)
T PF00083_consen 414 ---------------------GWGVFLIFAGVCLIAIIFVYFFLPETKGKT 443 (451)
T ss_pred ---------------------ccccchhhHHHHHHHHhheeEEEeeCCCCC
Confidence 244667777777887877777888887644
No 205
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.36 E-value=4.5e-06 Score=82.18 Aligned_cols=153 Identities=14% Similarity=0.123 Sum_probs=84.8
Q ss_pred hhhhHHHHHHHHHHHhhhhHHHHHhcHHHHHHH-hCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHH
Q 017795 133 LMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMA 209 (366)
Q Consensus 133 l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~-~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~ 209 (366)
.|++.+|.+...+++..+.........+..+++ .|++.+++ ..+..++...+.+|+.|.++||++.|+.. ++..
T Consensus 4 ~~~~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~L---l~~i 80 (412)
T PF01306_consen 4 FKNKNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHL---LWFI 80 (412)
T ss_dssp CHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHH---HHHH
T ss_pred ccCchHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHH---HHHH
Confidence 367788877766666666655566667777765 89998887 88888899999999999999999976543 1222
Q ss_pred HHHHHHHHHHHHHHh-----cchh-HHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhH
Q 017795 210 VAQVVMAFALLYYAI-----GWPG-EIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVI 283 (366)
Q Consensus 210 ~~~~~~~~~~~l~~~-----~~~~-~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i 283 (366)
....+....++.+.. .+.. ..+++.+..|+++.+..++.=+++.. +. +..+--||=.=+.+.+|-++ +..+
T Consensus 81 ~~l~~l~~pff~~v~~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er-~s-r~~~feYG~~R~wGSig~ai-~s~~ 157 (412)
T PF01306_consen 81 AILLLLFGPFFIYVFGPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEAYAER-VS-RRNGFEYGRARMWGSIGFAI-ASLL 157 (412)
T ss_dssp HHHHHTCHHHHHHTHHHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHHHHHH-HH-HHHSS-HHHHHHHHHHHHHH-HHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHH-HH-HHhcCCcchHHHHhhHHHHH-HHHH
Confidence 222222222222211 1111 12222233344444444444333322 21 23344455555555666665 6677
Q ss_pred HHHHhhhh
Q 017795 284 ASGIYDYY 291 (366)
Q Consensus 284 ~G~l~d~~ 291 (366)
+|.+++..
T Consensus 158 ~G~L~~i~ 165 (412)
T PF01306_consen 158 AGILFNIN 165 (412)
T ss_dssp HHHHHHHH
T ss_pred hheeeeeC
Confidence 88888754
No 206
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.34 E-value=2.7e-06 Score=84.56 Aligned_cols=160 Identities=17% Similarity=0.217 Sum_probs=110.6
Q ss_pred HHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhh----hhhhhccCchhHHHHHHHHHHHHHHHHHHhcch-----
Q 017795 159 LGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSE----AIVRKFAYPRPVAMAVAQVVMAFALLYYAIGWP----- 227 (366)
Q Consensus 159 l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD----~~grr~~~~R~~~~~~~~~~~~~~~~l~~~~~~----- 227 (366)
.+.+.+.+|.++... ...+..+++.+..|+.|++|| |+|||+. + +.++.++.++++.++....+
T Consensus 25 ~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp----~-~l~g~i~~~~~~~llf~~~p~~~~~ 99 (428)
T PF13347_consen 25 LYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRP----W-ILIGAILLALSFFLLFSPPPAGLSF 99 (428)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccce----E-eehhhHHHHHHHHHhhccccchhhh
Confidence 334455579988765 677778899999999999999 5565433 3 35566666666555442211
Q ss_pred --h--HHHHHHHHHHHHhhhhhhhHHHHHHHhhCC-CchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhhhhhhhhhhhc
Q 017795 228 --G--EIYVTTVLVGLSYGAHWAIVPAAASELFGL-KSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKY 302 (366)
Q Consensus 228 --~--~l~~~~~l~G~~~g~~~~~~~~~~se~f~~-~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~~~~~~~~~~~ 302 (366)
. .+.+..+++.+++........++.+|+.+. ++|....+.-.....+|+.+ ...+.+.+.+..++...
T Consensus 100 ~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l-~~~~~~~l~~~~g~~~~------ 172 (428)
T PF13347_consen 100 TAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLL-ASFLAPILVSWFGGGDT------ 172 (428)
T ss_pred hhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHH-HHHHhhhhhhhhccCcc------
Confidence 1 134445556777777777777888999874 57999999998888888875 56777777765552210
Q ss_pred cCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHHhh
Q 017795 303 NGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHR 349 (366)
Q Consensus 303 ~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~ 349 (366)
...|++..++.+++.+++.++.....++
T Consensus 173 -------------------~~~~~~~~~v~~iv~~v~~~i~~~~~ke 200 (428)
T PF13347_consen 173 -------------------SNGYRWMALVLAIVGLVFFLITFFFVKE 200 (428)
T ss_pred -------------------chHHHHHHHHHHHHHHHHhhhhhheeee
Confidence 0139999999998888888777777666
No 207
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.33 E-value=1.5e-05 Score=80.37 Aligned_cols=131 Identities=11% Similarity=0.110 Sum_probs=82.5
Q ss_pred HHhcHHHHH-HHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH-hc--chh
Q 017795 155 VIDNLGQIC-QSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IG--WPG 228 (366)
Q Consensus 155 ~~~~l~~i~-~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~-~~--~~~ 228 (366)
+..+++.+. +.+|.+...+ ...+.-++..+..|++|++|||...|+..+|+++ ..+.+.+++++.++. .. ...
T Consensus 25 ~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~i-l~g~i~~~i~~~llf~~p~~~~~ 103 (473)
T PRK10429 25 VYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWI-LIGTLANSVVLFLLFSAHLFEGT 103 (473)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhH-hhhhHHHHHHHHHHHcCCCCCcc
Confidence 334445544 4569988765 7778889999999999999997644433345554 444455555544332 21 111
Q ss_pred ----HHHHHHHHHHHHhhhhhhhHHHHHHHhh-CCCchhhHHHHHHhHhhhhHHHhhhhHHHHH
Q 017795 229 ----EIYVTTVLVGLSYGAHWAIVPAAASELF-GLKSFGALYNFLTLASPAGSLIFSGVIASGI 287 (366)
Q Consensus 229 ----~l~~~~~l~G~~~g~~~~~~~~~~se~f-~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l 287 (366)
.+++..++.++++........++.+|+. ..++|....+.-.....+|+.+ .+.+...+
T Consensus 104 ~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~-~~~~~~~~ 166 (473)
T PRK10429 104 AQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFV-TAGFTLPF 166 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 1223334556677666677778889987 4778999888877777777665 44444433
No 208
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.33 E-value=4.3e-05 Score=74.48 Aligned_cols=190 Identities=16% Similarity=0.130 Sum_probs=124.5
Q ss_pred HHHHhhhhHHHHHHHHHHHhhhhHHHHHhcHHHHH-HHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchh
Q 017795 129 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQIC-QSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRP 205 (366)
Q Consensus 129 ~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~-~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~ 205 (366)
+++...+++...++...+.+.....+-...+-+|. +-+|++..++ +..+...+..+|-.+.|++..+-..+ .|.
T Consensus 201 ~~~~~~~~~a~~f~~fl~l~t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~---~~~ 277 (403)
T PF03209_consen 201 WRQVWASPQARRFFVFLFLGTLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGK---KRT 277 (403)
T ss_pred HHHHHhCCChhHHHHHHHHHHHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCc---hHH
Confidence 34455566655555554444444443333444444 4589987665 88888888889999999876642221 121
Q ss_pred HHHHHHHHHHHHHHHH--HH--hcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhh
Q 017795 206 VAMAVAQVVMAFALLY--YA--IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSG 281 (366)
Q Consensus 206 ~~~~~~~~~~~~~~~l--~~--~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp 281 (366)
. ..++.+.++++.+ ++ ..+...+....+++|++.|....-.-+.+.++-..++-|+..|....+..++..+ |.
T Consensus 278 a--~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Gl-g~ 354 (403)
T PF03209_consen 278 A--ALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGL-GT 354 (403)
T ss_pred H--HHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHH-HH
Confidence 1 3344444433333 22 3456678889999999999877777778889888899999999999999999996 88
Q ss_pred hHHHHHhhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHH
Q 017795 282 VIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIV 346 (366)
Q Consensus 282 ~i~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~ 346 (366)
.++|.+.|....-.+ + .....|..+|.+-++..+++..+...+
T Consensus 355 ~~GG~~~D~~~~~~~--------~--------------~~~~aY~~VF~lEa~ll~~a~~ll~~l 397 (403)
T PF03209_consen 355 FLGGALRDLVRALFG--------N--------------SPALAYGVVFALEAVLLLAALVLLGRL 397 (403)
T ss_pred HHHHHHHHHHHHhcc--------C--------------CcchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999986531100 0 011139999988887766665554433
No 209
>PRK11462 putative transporter; Provisional
Probab=98.32 E-value=2.6e-05 Score=78.56 Aligned_cols=134 Identities=13% Similarity=0.075 Sum_probs=89.4
Q ss_pred hcHHH-HHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHhcc---hh-H
Q 017795 157 DNLGQ-ICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAIGW---PG-E 229 (366)
Q Consensus 157 ~~l~~-i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~~~---~~-~ 229 (366)
.++.. +....|.+...+ ...+.-++..+.-|+.|++|||...|...+||+++..+........+++..+. .. .
T Consensus 30 ~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~ 109 (460)
T PRK11462 30 LYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKM 109 (460)
T ss_pred HHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHH
Confidence 33444 445579987765 67777889999999999999998766666677765544443333333332221 11 2
Q ss_pred --HHHHHHHHHHHhhhhhhhHHHHHHHhhC-CCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhh
Q 017795 230 --IYVTTVLVGLSYGAHWAIVPAAASELFG-LKSFGALYNFLTLASPAGSLIFSGVIASGIYDYY 291 (366)
Q Consensus 230 --l~~~~~l~G~~~g~~~~~~~~~~se~f~-~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~ 291 (366)
+++..+++.+++........++.+|+.. .++|+...++-..+..+|+.+ ++.+...+....
T Consensus 110 ~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~-~~~~~~plv~~~ 173 (460)
T PRK11462 110 IYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGML-STVLMMPLVNLI 173 (460)
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHh
Confidence 2334445677777777777788888876 567999999999988888875 666655554433
No 210
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.31 E-value=3.6e-05 Score=73.84 Aligned_cols=124 Identities=14% Similarity=0.135 Sum_probs=79.5
Q ss_pred HHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHH
Q 017795 162 ICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAIGWPGEIYVTTVLVGL 239 (366)
Q Consensus 162 i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~l~G~ 239 (366)
+.+++|++..++ +...-...+.+.+++.|.++||+|||+.. .+..++..++++.-...+...+++++++-|+
T Consensus 60 LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~c------l~~cily~~scl~k~~~~~~~L~~GRvlgGi 133 (354)
T PF05631_consen 60 LYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKAC------LLFCILYSLSCLTKHSSNYPVLLLGRVLGGI 133 (354)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHH------HHHHHHHHHHHHHHhccccHHHHHHHHHHHH
Confidence 446789988776 33334445667788889999999998765 4555555555555556777889999999999
Q ss_pred HhhhhhhhHHH-HHHHhh----CCCchhhHHHHHH-hHhhhhHHHhhhhHHHHHhhhhh
Q 017795 240 SYGAHWAIVPA-AASELF----GLKSFGALYNFLT-LASPAGSLIFSGVIASGIYDYYA 292 (366)
Q Consensus 240 ~~g~~~~~~~~-~~se~f----~~~~~g~~~g~~~-~~~~~G~~i~gp~i~G~l~d~~~ 292 (366)
+....++..-+ ++.|.- +.+..+..++.+. ..+.+-++ .+++++-++.|..+
T Consensus 134 aTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI-~aGv~a~~l~~~~~ 191 (354)
T PF05631_consen 134 ATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAI-GAGVVANVLADWFG 191 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHH-HHhHHHHHHHHHhC
Confidence 98888877766 555653 3333444444443 22223333 24555555555544
No 211
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.30 E-value=6.3e-09 Score=103.66 Aligned_cols=103 Identities=21% Similarity=0.273 Sum_probs=88.0
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH-hc---chhHHHHHHHHHHHHhhhhhhhHH
Q 017795 174 YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IG---WPGEIYVTTVLVGLSYGAHWAIVP 249 (366)
Q Consensus 174 ~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~-~~---~~~~l~~~~~l~G~~~g~~~~~~~ 249 (366)
..+...++..+|.++.|+++||+|||+.+ .++.+++.++.++.. .. +...+.+++++.|++.|+.....+
T Consensus 51 ~~~~~~~g~~~G~~~~g~~~d~~GRk~~~------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~ 124 (451)
T PF00083_consen 51 LTSSFFIGAIVGALIFGFLADRYGRKPAL------IISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSP 124 (451)
T ss_pred HHHHHHhhhcccccccccccccccccccc------ccccccccccccccccccccccccccccccccccccccccccccc
Confidence 67888899999999999999999999877 667777777766655 33 466788899999999999999999
Q ss_pred HHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhH
Q 017795 250 AAASELFGLKSFGALYNFLTLASPAGSLIFSGVI 283 (366)
Q Consensus 250 ~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i 283 (366)
.++.|..++++|+....+......+|..+ +..+
T Consensus 125 ~~~~E~~~~~~R~~~~~~~~~~~~~G~~~-~~~~ 157 (451)
T PF00083_consen 125 IYISEIAPPKHRGFLSSLFQLFWALGILL-ASLI 157 (451)
T ss_pred ccccccccccccccccccccccccccccc-cccc
Confidence 99999999999999999999988888875 5443
No 212
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.24 E-value=7.1e-06 Score=82.81 Aligned_cols=122 Identities=11% Similarity=0.077 Sum_probs=85.9
Q ss_pred HHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH---------h--cchhHH
Q 017795 164 QSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA---------I--GWPGEI 230 (366)
Q Consensus 164 ~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~---------~--~~~~~l 230 (366)
..+|+++... .....+++..+|..+.+.+.+|++.|+. +.++.++.+++.+... . .+...+
T Consensus 281 ~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~------l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~ 354 (468)
T TIGR00788 281 QCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLL------FGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFV 354 (468)
T ss_pred ccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHH------HHHHHHHHHHHHhCceeeeeccccccCCCCeeee
Confidence 3578887765 4555566666666666666555544332 2555555555443321 0 111233
Q ss_pred HHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhh
Q 017795 231 YVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYA 292 (366)
Q Consensus 231 ~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~ 292 (366)
....++.+++.+..+......+++..+++..|+.+++.+...++|..+ ++.++|.+.+..|
T Consensus 355 ~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v-~~~~gg~l~~~~g 415 (468)
T TIGR00788 355 LGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSV-SGFLGVLLMETIG 415 (468)
T ss_pred eehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHH-HHHHHHHHHHHcC
Confidence 455677788888888888889999999999999999999999999996 9999999998876
No 213
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.23 E-value=4.7e-05 Score=76.83 Aligned_cols=184 Identities=13% Similarity=0.065 Sum_probs=114.1
Q ss_pred hHHHHHHHHHHHhhhhHHHHHhcHHHH-HHH-hCCChh-------HH-HHHHHHHHHhhhhhhhhhhhhhhhhhccCchh
Q 017795 136 ADFLLLFFSLVLASGSGLTVIDNLGQI-CQS-LGYADT-------SI-YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRP 205 (366)
Q Consensus 136 ~~~~ll~~~~~~~~~~~~~~~~~l~~i-~~~-~g~~~~-------~~-~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~ 205 (366)
+.+|.+++..++.+.+.+.+..+...+ .++ ++.++. .. +.+...+.+.+...+.+.+-+++.||..- |+
T Consensus 258 ~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~-~k 336 (477)
T TIGR01301 258 RPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGA-GK 336 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ch
Confidence 467888888888877766555544444 333 332211 10 12222233333333434444444333221 12
Q ss_pred HHHHHHHHHHHHHHHHHH-hcc---------------------hhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCC--Cch
Q 017795 206 VAMAVAQVVMAFALLYYA-IGW---------------------PGEIYVTTVLVGLSYGAHWAIVPAAASELFGL--KSF 261 (366)
Q Consensus 206 ~~~~~~~~~~~~~~~l~~-~~~---------------------~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~--~~~ 261 (366)
..-.++.++.+++++... ..+ ....++...++|+..+...++-++++++..+. ++.
T Consensus 337 ~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~~~~ 416 (477)
T TIGR01301 337 RLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSNLGAGQ 416 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccccCCCC
Confidence 222566566665555433 111 14456667788999999889999999999884 567
Q ss_pred hhHHHHHHhHhhhhHHHhhhhHHHHHhhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHH
Q 017795 262 GALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMV 341 (366)
Q Consensus 262 g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~ 341 (366)
|..+|+.|.+..+...+ .....|.+.+..++ .-.+++.+.++..+++++
T Consensus 417 G~~mgilN~~I~lpQii-~sl~~g~~~~~~g~------------------------------~~~~~~~~~gv~~~~aa~ 465 (477)
T TIGR01301 417 GLSMGVLNLAIVIPQII-VSLGSGPWDQLFGG------------------------------GNLPAFVVGAVAAFVSGL 465 (477)
T ss_pred cchhhHHHHHHHHHHHH-HHHHHHHHHHHcCC------------------------------CCeeHHHHHHHHHHHHHH
Confidence 99999999999999997 56777876665551 145678888888888888
Q ss_pred HHHHHHhhcH
Q 017795 342 MSLIVVHRTK 351 (366)
Q Consensus 342 ~~~~~~~~~r 351 (366)
+++++.+|.+
T Consensus 466 ~~~~~~~~~~ 475 (477)
T TIGR01301 466 LALILLPRPR 475 (477)
T ss_pred HHHHhCCCCC
Confidence 8888777654
No 214
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.21 E-value=0.00018 Score=73.16 Aligned_cols=153 Identities=14% Similarity=0.069 Sum_probs=99.7
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhhccC-chhHHHHHHHHHHHHHHHHH-------Hhc----chhHHHHHHHHHHHHh
Q 017795 174 YVSMISIWNFLGRVGGGYFSEAIVRKFAY-PRPVAMAVAQVVMAFALLYY-------AIG----WPGEIYVTTVLVGLSY 241 (366)
Q Consensus 174 ~~sl~~i~~~~g~~~~G~lsD~~grr~~~-~R~~~~~~~~~~~~~~~~l~-------~~~----~~~~l~~~~~l~G~~~ 241 (366)
+.++..++..+..++.|++.||+++|+.- ..+.-+.+++++.+++++.+ ... +...+....++.|+|.
T Consensus 314 ~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge 393 (489)
T PRK10207 314 FQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGE 393 (489)
T ss_pred HHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHH
Confidence 55555566667788889999999988632 22223355666666565422 111 1234556677889999
Q ss_pred hhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhhhhhhhhhhhccCCCCCcccCCCCCCcccC
Q 017795 242 GAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLG 321 (366)
Q Consensus 242 g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g 321 (366)
+...+...+.+.+..|++..|.++|+.++...+|+.+ |..+++........ . ++.+ .
T Consensus 394 ~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~l-g~~l~~~~~~~~~~-~----------------~~~~-----~ 450 (489)
T PRK10207 394 LFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLL-GGYVATFTAVPDNI-T----------------DPLE-----T 450 (489)
T ss_pred HHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhcccccc-c----------------cchh-----h
Confidence 9888888899999999999999999999999999996 77766654211110 0 0000 0
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHhh
Q 017795 322 SICYSITCGIMAGLCIIAMVMSLIVVHR 349 (366)
Q Consensus 322 ~~~~~~~f~i~~~~~~~~~~~~~~~~~~ 349 (366)
...|.+.|...++.++++.++.+++.++
T Consensus 451 ~~~~~~~f~~~~~~~~~~~v~~~~~~~~ 478 (489)
T PRK10207 451 LPVYTNVFGKIGLVTLGVAVVMALMVPW 478 (489)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0127788888887777766665554433
No 215
>PRK09848 glucuronide transporter; Provisional
Probab=98.18 E-value=7.5e-05 Score=74.60 Aligned_cols=112 Identities=15% Similarity=0.196 Sum_probs=70.4
Q ss_pred HHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHhc----c-hhH--H
Q 017795 160 GQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAIG----W-PGE--I 230 (366)
Q Consensus 160 ~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~~----~-~~~--l 230 (366)
.++.+.+|++...+ ..++..++..+..+++|+++||.++|+..+|+++...+...+..+.+++... . ... .
T Consensus 33 ~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (448)
T PRK09848 33 SYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKVVYA 112 (448)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchHHHHH
Confidence 34445579987766 7778889999999999999999988776666666555554444444433221 1 111 2
Q ss_pred HHHHHHHHHHhhhhhhhHHHHHHHhhCC-CchhhHHHHHHhH
Q 017795 231 YVTTVLVGLSYGAHWAIVPAAASELFGL-KSFGALYNFLTLA 271 (366)
Q Consensus 231 ~~~~~l~G~~~g~~~~~~~~~~se~f~~-~~~g~~~g~~~~~ 271 (366)
++..++.+++++...+...++..++... ++|....+.-..+
T Consensus 113 ~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~ 154 (448)
T PRK09848 113 YLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIA 154 (448)
T ss_pred HHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHH
Confidence 2334556777776666666666666544 4577665554433
No 216
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.17 E-value=0.00017 Score=73.49 Aligned_cols=154 Identities=15% Similarity=0.133 Sum_probs=101.6
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHhcc----------hhHHHHHHHHHHHHhhh
Q 017795 174 YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAIGW----------PGEIYVTTVLVGLSYGA 243 (366)
Q Consensus 174 ~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~~~----------~~~l~~~~~l~G~~~g~ 243 (366)
+.++-.+...+..++.+++-.|.++|.. .+..+.+++++++++++.+.... ...+....++.|+|-+.
T Consensus 321 ~~s~n~i~iil~~p~~~~~~~~l~~r~~--~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~ 398 (500)
T PRK09584 321 YQALNPFWIMIGSPILAAIYNKMGDRLP--MPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELM 398 (500)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHhCcCCC--cHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHH
Confidence 5556666666666766666666666543 34455778888888877754221 23566778889999999
Q ss_pred hhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCC-
Q 017795 244 HWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGS- 322 (366)
Q Consensus 244 ~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~- 322 (366)
..+...+++.+..|++.+|..+|+..++..+|+.+ ++.+.+........ ......
T Consensus 399 ~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~-~g~~~~~~~~~~~~-----------------------~~~~~~~ 454 (500)
T PRK09584 399 ISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALI-AGYVANLMAVPDNV-----------------------TDPLMSL 454 (500)
T ss_pred HhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhcccccc-----------------------ccchhhh
Confidence 99999999999999999999999888888777774 55555433211000 000000
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHhhcHHH
Q 017795 323 ICYSITCGIMAGLCIIAMVMSLIVVHRTKSV 353 (366)
Q Consensus 323 ~~~~~~f~i~~~~~~~~~~~~~~~~~~~r~~ 353 (366)
..|.+.|...++++++.+++.+++.++.+|.
T Consensus 455 ~~~~~~f~~~~~~~~~~a~~~~~~~~~~~k~ 485 (500)
T PRK09584 455 EVYGRVFLQIGIATAVIAVLMLLTAPKLNRM 485 (500)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1278899888887776666655555554443
No 217
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.14 E-value=1.7e-05 Score=79.24 Aligned_cols=176 Identities=19% Similarity=0.208 Sum_probs=119.9
Q ss_pred HHhhhhHHHHHH-HHHHHhhhhHHHHHhcHHHHHHHhCCChhHH-HHH-HHHHHHhhhhhhhhhhhhhhhhhccCchhHH
Q 017795 131 QALMKADFLLLF-FSLVLASGSGLTVIDNLGQICQSLGYADTSI-YVS-MISIWNFLGRVGGGYFSEAIVRKFAYPRPVA 207 (366)
Q Consensus 131 ~~l~~~~~~ll~-~~~~~~~~~~~~~~~~l~~i~~~~g~~~~~~-~~s-l~~i~~~~g~~~~G~lsD~~grr~~~~R~~~ 207 (366)
+.+.+++..+++ .+.+.+.+.++ +.+++=..+++.|-.+.-. .++ +...+-++.-++.+++-+|+|+-+.+
T Consensus 366 ~~~~s~~~llff~~av~mG~g~~l-v~tFLfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~----- 439 (618)
T KOG3762|consen 366 KVFASPHILLFFFVAVVMGAGVGL-VFTFLFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVM----- 439 (618)
T ss_pred HHhcCCCEEehhHHHHHHHHHHHH-HHHHHHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhccccee-----
Confidence 344455444333 33333333333 3344555678877433321 222 22334455556778888888886655
Q ss_pred HHHHHHHHHHHHHHHH-hcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHh-HhhhhHHHhhhhHHH
Q 017795 208 MAVAQVVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTL-ASPAGSLIFSGVIAS 285 (366)
Q Consensus 208 ~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~-~~~~G~~i~gp~i~G 285 (366)
..++....+=++.+. ..+++.++..-++.|+..+..|..+.++++..-|++-++++.+++.. .-.+|-.+ |.+|+|
T Consensus 440 -~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~-GslIGG 517 (618)
T KOG3762|consen 440 -YLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGL-GSLIGG 517 (618)
T ss_pred -eehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcch-hhhhhh
Confidence 555555555555555 57788888888999999999999999999999999999999998755 46678885 889999
Q ss_pred HHhhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHH
Q 017795 286 GIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIV 346 (366)
Q Consensus 286 ~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~ 346 (366)
.+..+.+ -+..|.+.++.|++.++..+.+
T Consensus 518 ~~v~~fg--------------------------------~~ttf~~~giAcl~~l~~~~~i 546 (618)
T KOG3762|consen 518 FVVERFG--------------------------------ARTTFRIFGIACLVTLALFISI 546 (618)
T ss_pred hhheeeh--------------------------------hHHHHHHHHHHHHHHHHHHHHh
Confidence 9998887 6788888888777765554443
No 218
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.13 E-value=0.0001 Score=68.00 Aligned_cols=126 Identities=15% Similarity=0.098 Sum_probs=82.6
Q ss_pred hhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH--h
Q 017795 149 SGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA--I 224 (366)
Q Consensus 149 ~~~~~~~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~--~ 224 (366)
.+..+.+..+-|++.+.+|++.++. ....-.++..+ .+..|.+.|++|.+... .++.+...+|+.++. .
T Consensus 15 ~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l------~iG~~~~~~GY~~~~l~~ 87 (250)
T PF06813_consen 15 SGTTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVL------LIGAVLGFVGYGLLWLAV 87 (250)
T ss_pred cCcccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHH------HHHHHHHHHHHHHHHHHH
Confidence 4455677778889999999998876 44444566665 48889999999865433 667777777766543 2
Q ss_pred cc----hh--HHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhh
Q 017795 225 GW----PG--EIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGV 282 (366)
Q Consensus 225 ~~----~~--~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~ 282 (366)
.. +. .+.+..++.|.+.....+....+..+.|| ++||++.|+.-....+++.+++.+
T Consensus 88 ~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i 150 (250)
T PF06813_consen 88 SGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQI 150 (250)
T ss_pred hCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHH
Confidence 11 12 22233333334333323344445568896 689999999999988888876543
No 219
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.09 E-value=0.00016 Score=71.49 Aligned_cols=117 Identities=15% Similarity=0.177 Sum_probs=76.3
Q ss_pred HHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH-hcchhHHH
Q 017795 155 VIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IGWPGEIY 231 (366)
Q Consensus 155 ~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~-~~~~~~l~ 231 (366)
+...++.+.++.|++..++ ..++..+..+++.+++|+++||.++++.. +.+..++.++..+... ..+...++
T Consensus 21 ~~p~~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~-----l~~~~l~~~~~~~~~~~~~~f~~~~ 95 (400)
T PF03825_consen 21 FLPYLPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRI-----LALLSLLSALALLLLAFSSSFWWLF 95 (400)
T ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHH-----HHHHHHHHHHHHHHHHHhccHHHHH
Confidence 4456788999999998887 88889999999999999999998664332 2333444444333333 34445566
Q ss_pred HHHHHHHHHhhhhhhhHHHHHHHhhCC--CchhhHHHHHHhHhhhhH
Q 017795 232 VTTVLVGLSYGAHWAIVPAAASELFGL--KSFGALYNFLTLASPAGS 276 (366)
Q Consensus 232 ~~~~l~G~~~g~~~~~~~~~~se~f~~--~~~g~~~g~~~~~~~~G~ 276 (366)
+..++..+.+....++.-++..+.... +++|..--..+.+..+++
T Consensus 96 ~~~~l~~~~~~p~~pl~dsi~~~~~~~~~~~YG~iRlwGSiGf~~~~ 142 (400)
T PF03825_consen 96 VIMLLFSFFFSPTMPLSDSIALSYLGDRGKDYGRIRLWGSIGFIVAA 142 (400)
T ss_pred HHHHHHHHHHccHHHHHHHHHHHHcccccCCCCcchhhhhHHHHHHH
Confidence 666677777777777777777776542 234444444344443333
No 220
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.07 E-value=0.0001 Score=71.93 Aligned_cols=128 Identities=15% Similarity=0.043 Sum_probs=91.0
Q ss_pred HHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH-----hcc--------h
Q 017795 163 CQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-----IGW--------P 227 (366)
Q Consensus 163 ~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~-----~~~--------~ 227 (366)
..|++.+..-. .+++..+... .|+.+|+.||+...-..++|..++..+.++.+.+..+.. ... .
T Consensus 7 IvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~ 85 (403)
T PF03209_consen 7 IVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPF 85 (403)
T ss_pred HHHhccHHHHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHccccccccccc
Confidence 45666654432 6666666555 699999999999833444455555666655555443321 111 1
Q ss_pred h----HHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhh
Q 017795 228 G----EIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYA 292 (366)
Q Consensus 228 ~----~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~ 292 (366)
. ...+...++|+|.+...+...+.++|..++++|+.+.+++....-+|..+ +.++.|.+.|.+.
T Consensus 86 ~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv-~ai~~g~lL~~~s 153 (403)
T PF03209_consen 86 WLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIV-SAIVFGRLLDPFS 153 (403)
T ss_pred HHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHH-HHHHHHHHccccC
Confidence 1 22345567788888888888899999999999999999999998899986 8999999888765
No 221
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.07 E-value=4e-05 Score=75.27 Aligned_cols=159 Identities=14% Similarity=0.108 Sum_probs=105.7
Q ss_pred CCHHHHhhhhHHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCch
Q 017795 127 FTLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPR 204 (366)
Q Consensus 127 ~~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R 204 (366)
.++++.+++.+|.++.+++..+.+........+-..+...||+...+ ...+..+++++|..+.|.+.||..+-+..
T Consensus 257 ~si~~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~-- 334 (480)
T KOG2563|consen 257 KSIKSCFKNRQFIILAICYGIGLGLFNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLT-- 334 (480)
T ss_pred HHHHHHHcCccHHHHHHHHhhhHHHHHHHHHHhhhccccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHH--
Confidence 35778899999999999888887777666666665666678875333 66666778899999999999998543322
Q ss_pred hHHHHHHHHHHHHH-HHHHH----hcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHh
Q 017795 205 PVAMAVAQVVMAFA-LLYYA----IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIF 279 (366)
Q Consensus 205 ~~~~~~~~~~~~~~-~~l~~----~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~ 279 (366)
. .+......++ +.++. ......++....+.|++..+..++..-+..|.--+..=++..|+.++.+.+-+.++
T Consensus 335 --~-~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~ 411 (480)
T KOG2563|consen 335 --T-LVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVIL 411 (480)
T ss_pred --H-HHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHH
Confidence 1 1222222222 22221 12234567777888888888888777777777556666777888888777666653
Q ss_pred hhhHHHHHhhhh
Q 017795 280 SGVIASGIYDYY 291 (366)
Q Consensus 280 gp~i~G~l~d~~ 291 (366)
..+.+...+..
T Consensus 412 -~~~~~~~~~~~ 422 (480)
T KOG2563|consen 412 -VFIMGILAEDL 422 (480)
T ss_pred -HHHHHHHhhcc
Confidence 55556555443
No 222
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.03 E-value=5e-05 Score=77.52 Aligned_cols=181 Identities=17% Similarity=0.157 Sum_probs=108.3
Q ss_pred hhHHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChh-HHHHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHH
Q 017795 135 KADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADT-SIYVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQV 213 (366)
Q Consensus 135 ~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~~~~-~~~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~ 213 (366)
++.++...+..+..........+..+++.+..|.+.. .....+.++.+.++..+.+++.||+|||+.. ..+..
T Consensus 294 ~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~~~~~~~~~~v~~~~t~~~~~lvd~~gRr~ll------l~s~~ 367 (513)
T KOG0254|consen 294 KRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDTFLASIILGVVNFLGTLVATYLVDRFGRRKLL------LFGAA 367 (513)
T ss_pred HHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH------HHhHH
Confidence 3334444444444444444566778889999888755 3356666777788888889999999998765 55556
Q ss_pred HHHHHHHHHHh-----cc--------hhHHHHHHHHH-HHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHh
Q 017795 214 VMAFALLYYAI-----GW--------PGEIYVTTVLV-GLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIF 279 (366)
Q Consensus 214 ~~~~~~~l~~~-----~~--------~~~l~~~~~l~-G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~ 279 (366)
.+.++.++++. .. .....++..++ .....+..++.+.+.+|+||.+.|+.+.++......+.+++.
T Consensus 368 ~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v 447 (513)
T KOG0254|consen 368 GMSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLI 447 (513)
T ss_pred HHHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHH
Confidence 66555555431 11 01112222222 222223345556688999999999999999888776666642
Q ss_pred hhhHHHHHhhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHH-HHHHHHhhcHHHH
Q 017795 280 SGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMV-MSLIVVHRTKSVY 354 (366)
Q Consensus 280 gp~i~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~-~~~~~~~~~r~~~ 354 (366)
...+....... .....|...++++.+..+ ...++.+++|.+.
T Consensus 448 -----~~~~~~~~~~~----------------------------~~~~~f~~f~~~~~~~~~~fv~~~~pETkg~s 490 (513)
T KOG0254|consen 448 -----SFFFPFITEAL----------------------------GIGGTFGYFGGICLLSLIIFVFFFVPETKGLT 490 (513)
T ss_pred -----HHHHHHHHHhc----------------------------cccchHHHHHHHHHHHHHHHheEEcccCCCCc
Confidence 22222211000 024566777777777666 5666677776544
No 223
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.00 E-value=0.00099 Score=67.92 Aligned_cols=101 Identities=12% Similarity=0.139 Sum_probs=71.4
Q ss_pred HHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHh-cch-h--HHHHHHHHHHHHhhhhhhhHHHHHHHhh
Q 017795 181 WNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAI-GWP-G--EIYVTTVLVGLSYGAHWAIVPAAASELF 256 (366)
Q Consensus 181 ~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~-~~~-~--~l~~~~~l~G~~~g~~~~~~~~~~se~f 256 (366)
....+....+...|++|||... .....+.++++++.+. ... . ...+...+..++.+..+.+.+...+|++
T Consensus 362 ~~~p~~~~~~~~~~~~gR~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~ 435 (521)
T KOG0255|consen 362 VELPAYFRNGLLLPEFGRRPPL------FLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIGSAFNLIFLYSAELI 435 (521)
T ss_pred HHhhHHHHHHHHHHHhCcHHHH------HHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 4444555568888999887654 7777777777776552 222 2 2333344444556666777788999999
Q ss_pred CCCchhhHHHHHHhHhhhhHHHhhhhHHHHHh
Q 017795 257 GLKSFGALYNFLTLASPAGSLIFSGVIASGIY 288 (366)
Q Consensus 257 ~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~ 288 (366)
|+..|..+.+..++...+|+++ +|.+.-...
T Consensus 436 pt~~r~~~~~~~~~~~~~~~i~-ap~~~~~~~ 466 (521)
T KOG0255|consen 436 PTVVRNTAVGAISAAARLGSIL-APLFPLLLR 466 (521)
T ss_pred cHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHh
Confidence 9999999999999999999996 787665443
No 224
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.91 E-value=5.7e-05 Score=75.90 Aligned_cols=131 Identities=15% Similarity=0.175 Sum_probs=94.0
Q ss_pred HHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHH--HhhhhhhhHHHHHHHhh
Q 017795 179 SIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAIGWPGEIYVTTVLVGL--SYGAHWAIVPAAASELF 256 (366)
Q Consensus 179 ~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~l~G~--~~g~~~~~~~~~~se~f 256 (366)
.+..++-.++.|.+||++|||... ........+.-....... ++..++.++ ++++.++...+.++|..
T Consensus 72 ~~~~~i~s~~iG~lSD~~grk~~L------~~~~~~~~l~~~~~~~~~----~~~~~~~~l~g~~~~~~s~~~a~vadis 141 (463)
T KOG2816|consen 72 GLLTLISSPLIGALSDRYGRKVVL------LLPLFGTILPALCLLFQG----YWFFLLLGLSGGFSAIFSVGFAYVADIS 141 (463)
T ss_pred HHHHHHHHhhhHHhhhhhhhhhhH------HHHHHHHHHhHHHHHHHH----HHHhhhcccccchhhhhhhhhhheeecc
Confidence 566778889999999999998655 333333333322222222 222224333 34456677788899999
Q ss_pred CCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHH
Q 017795 257 GLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLC 336 (366)
Q Consensus 257 ~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~ 336 (366)
..++|...+|+++.....+..+ +|.+++++....+ +..+|++.++..
T Consensus 142 ~~~~R~~~~gll~~~~~~~~~~-~p~~~~~~~~~~~--------------------------------~a~~f~ia~~~~ 188 (463)
T KOG2816|consen 142 SEEERSSSIGLLSGTFGAGLVI-GPALGGYLVKFLG--------------------------------IALVFLIAAASG 188 (463)
T ss_pred chhHHHHHHHHHHHHHHHHHhH-HHHHHHHHHHhcC--------------------------------chHHHHHHHHHH
Confidence 9999999999999988888886 9999999988766 888999999888
Q ss_pred HHHHHHHHHHHhhcHH
Q 017795 337 IIAMVMSLIVVHRTKS 352 (366)
Q Consensus 337 ~~~~~~~~~~~~~~r~ 352 (366)
+++.+-.+++.+++..
T Consensus 189 ~~~~~y~~~~l~Esl~ 204 (463)
T KOG2816|consen 189 ILSLLYMLLFLPESLQ 204 (463)
T ss_pred HHHHHHHhhccccccC
Confidence 8877777777766443
No 225
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=97.91 E-value=0.00087 Score=60.77 Aligned_cols=129 Identities=17% Similarity=0.202 Sum_probs=88.7
Q ss_pred HHhcHHHHHHHhCCCh----hHHHHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH-hcc--h
Q 017795 155 VIDNLGQICQSLGYAD----TSIYVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IGW--P 227 (366)
Q Consensus 155 ~~~~l~~i~~~~g~~~----~~~~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~-~~~--~ 227 (366)
.....+.+..+.+.+. .....+...+...++.+..|.++||+|||+.. ..+.....++.++.. ..+ .
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~ 94 (338)
T COG0477 21 LSPALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVL------IIGLLLFLLGTLLLALAPNVGL 94 (338)
T ss_pred HHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHH------HHHHHHHHHHHHHHHhCccchH
Confidence 4445666667666554 22377777788888889999999999887322 333322233323322 222 4
Q ss_pred hHHHHHHHHHHHHhhhhhhhHHHHHHHhhCC-CchhhHHHHHHh-HhhhhHHHhhhhHHHHHhhh
Q 017795 228 GEIYVTTVLVGLSYGAHWAIVPAAASELFGL-KSFGALYNFLTL-ASPAGSLIFSGVIASGIYDY 290 (366)
Q Consensus 228 ~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~-~~~g~~~g~~~~-~~~~G~~i~gp~i~G~l~d~ 290 (366)
..+++..++.|++.+...+...++++|.++. ++++...+.... ...+|..+ +|.+++.+.+.
T Consensus 95 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 158 (338)
T COG0477 95 ALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLAL-GPLLAGLLLGA 158 (338)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 4566667778888888888899999999987 678888888888 56777775 88888877766
No 226
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.90 E-value=0.00027 Score=70.69 Aligned_cols=159 Identities=19% Similarity=0.213 Sum_probs=107.1
Q ss_pred hcHHHHHHHhCCChhHH-HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH-hc----chhHH
Q 017795 157 DNLGQICQSLGYADTSI-YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IG----WPGEI 230 (366)
Q Consensus 157 ~~l~~i~~~~g~~~~~~-~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~-~~----~~~~l 230 (366)
...+.+.+++|.++++. ......-......++.|.+||-+-- ..++|+..+.++.++.+++.+.++ .. +....
T Consensus 11 ~~~~~l~~~l~ls~~~~~~~~~~~~lPw~~Kp~~g~lsD~~pi-~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~ 89 (433)
T PF03092_consen 11 AIYPFLKDDLGLSPAQLQRLSSLASLPWSIKPLYGLLSDSFPI-FGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIA 89 (433)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHhCchHHhhhHHhhcccccc-cCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhH
Confidence 34556677899998775 3333333445678999999999732 123455555666666654444433 11 22344
Q ss_pred HHHHHHHHHHhhhhhhhHHHHHHHhhCCC--chhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhhhhhhhhhhhccCCCCC
Q 017795 231 YVTTVLVGLSYGAHWAIVPAAASELFGLK--SFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLP 308 (366)
Q Consensus 231 ~~~~~l~G~~~g~~~~~~~~~~se~f~~~--~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~~~~~~~~~~~~~~~~~ 308 (366)
.+..++..+|+...-.+.=+.+.|.-..+ .+|...+.......+|+++ +..+.|.+.+..+
T Consensus 90 ~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv-~~~l~G~l~~~~~---------------- 152 (433)
T PF03092_consen 90 VVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLV-GSLLSGPLLDSFG---------------- 152 (433)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHH-HHHhhhhhhhcCC----------------
Confidence 45566667777777777778888876332 3778888888888899996 8889999988776
Q ss_pred cccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHHhh
Q 017795 309 VSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHR 349 (366)
Q Consensus 309 ~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~ 349 (366)
++..|.+.+.+..+..+..+.+..+
T Consensus 153 ----------------~~~~f~i~~~~~~l~~~~~~~~~~e 177 (433)
T PF03092_consen 153 ----------------PQGVFLISAALPLLMLIVALFLLEE 177 (433)
T ss_pred ----------------CeEEehHHHHHHHHHHHHHHHhhhh
Confidence 7778888887777766666666554
No 227
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=97.90 E-value=0.00042 Score=69.22 Aligned_cols=136 Identities=15% Similarity=0.133 Sum_probs=98.7
Q ss_pred HhcHHHHH-HHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHhcc----hh
Q 017795 156 IDNLGQIC-QSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAIGW----PG 228 (366)
Q Consensus 156 ~~~l~~i~-~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~~~----~~ 228 (366)
..++..+. ...|.+...+ ...+.-++.++.-|+.|.++||..+|+...||+++..+..+..+..+++...+ ..
T Consensus 32 ~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k 111 (467)
T COG2211 32 VLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGK 111 (467)
T ss_pred HHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcc
Confidence 34444444 4578888765 66666788999999999999999888888888887777766666666654332 12
Q ss_pred --HHHHHHHHHHHHhhhhhhhHHHHHHHhhC-CCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhh
Q 017795 229 --EIYVTTVLVGLSYGAHWAIVPAAASELFG-LKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYA 292 (366)
Q Consensus 229 --~l~~~~~l~G~~~g~~~~~~~~~~se~f~-~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~ 292 (366)
..++.-.+.++++........++.+++-. +++|....+.=.....+|+.+ ...+.+.+....+
T Consensus 112 ~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l-~~~~~~plv~~~g 177 (467)
T COG2211 112 LIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLL-VAVLFPPLVKLFG 177 (467)
T ss_pred hHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhC
Confidence 23445567788888888888888888864 467999999988888888776 4566666665554
No 228
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=97.87 E-value=0.00036 Score=67.22 Aligned_cols=132 Identities=13% Similarity=0.092 Sum_probs=92.8
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH-hcchhHHHHHHHHHHHHhhhhhhhHHHHH
Q 017795 174 YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAA 252 (366)
Q Consensus 174 ~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~ 252 (366)
+..-...+..+|...||.++|++|||+.. ...+.+.++...+-. ..+...+.+...+.|+|.|+ .+...++-
T Consensus 118 lt~~v~~gmllga~~w~l~~d~~grr~~f------~~T~l~t~v~~~is~~spnf~~L~~f~~l~~~g~gg-~pv~~~~y 190 (528)
T KOG0253|consen 118 LTLSVFLGMLVGAMVWGLSADTIGRRKGF------NLTFLVTGVFGVISGASPNFASLCVFRALWGFGVGG-LPVDSAIY 190 (528)
T ss_pred HHHHHHhhhhhhhhhhheehhhhhcchhh------hhhHHHHHHHHHhhcCCCCeehhhHHHHHHhccCCC-ccHhHHHH
Confidence 44445566678999999999999999877 444444444333322 44556788889999999998 77777788
Q ss_pred HHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHH
Q 017795 253 SELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIM 332 (366)
Q Consensus 253 se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~ 332 (366)
.|..|..+++...-.. ..+.+|... ...++=......| |||-+..+
T Consensus 191 le~lp~~~r~~~~V~~-~~waig~v~-ea~law~vm~~~g--------------------------------wr~~l~~~ 236 (528)
T KOG0253|consen 191 LEFLPSSHRWLLTVMS-FFWAIGQVF-EALLAWGVMSNFG--------------------------------WRYLLFTS 236 (528)
T ss_pred HHhccCcCCCcchhHH-HHHHHHHHH-HHHHHHHHHHhhh--------------------------------HHHHHHHH
Confidence 8888878887766655 778888884 5555555555555 99887777
Q ss_pred HHHHHHHHHHHHHH
Q 017795 333 AGLCIIAMVMSLIV 346 (366)
Q Consensus 333 ~~~~~~~~~~~~~~ 346 (366)
..-..+.+..+.++
T Consensus 237 ~~pl~~~a~f~~w~ 250 (528)
T KOG0253|consen 237 STPLMFAARFLVWV 250 (528)
T ss_pred HhHHHHHHHHHhhc
Confidence 75555555555554
No 229
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=97.87 E-value=0.00098 Score=68.81 Aligned_cols=155 Identities=15% Similarity=0.073 Sum_probs=98.9
Q ss_pred HHHHhhh-hHHHHHHHHHHHhhhhHHHHHhcHHHHHHH-hCCChh---HH--HHHHHHHHHhhhhhhhhhhhhhhhhhcc
Q 017795 129 LPQALMK-ADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADT---SI--YVSMISIWNFLGRVGGGYFSEAIVRKFA 201 (366)
Q Consensus 129 ~~~~l~~-~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~-~g~~~~---~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~ 201 (366)
..+++++ +.|+...+..++.....+......|+.... ++-+.. .. .....+++..+|.++.|.+.-+++|-
T Consensus 302 P~~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~-- 379 (599)
T PF06609_consen 302 PHRLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHI-- 379 (599)
T ss_pred CHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccch--
Confidence 4567776 456665555555555555565666766554 444332 12 45566777788888888888666432
Q ss_pred CchhHHHHHHHHHHHHHHHHHH---hcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHH
Q 017795 202 YPRPVAMAVAQVVMAFALLYYA---IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLI 278 (366)
Q Consensus 202 ~~R~~~~~~~~~~~~~~~~l~~---~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i 278 (366)
| +.+.++.+++.+++.+++ ..+....+...++.|++.|....+...++.-..+.++.|++.++....-.+|+.+
T Consensus 380 --K-w~li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsI 456 (599)
T PF06609_consen 380 --K-WQLIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSI 456 (599)
T ss_pred --h-HHHHHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHH
Confidence 2 334445555554434443 2344556677788888888766655555555677788999999999998888886
Q ss_pred hhhhHHHHHhh
Q 017795 279 FSGVIASGIYD 289 (366)
Q Consensus 279 ~gp~i~G~l~d 289 (366)
|.-+...++.
T Consensus 457 -g~aIy~~I~~ 466 (599)
T PF06609_consen 457 -GYAIYNAIFT 466 (599)
T ss_pred -HHHHHHHHHH
Confidence 7666655554
No 230
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=97.85 E-value=0.00017 Score=72.21 Aligned_cols=186 Identities=18% Similarity=0.153 Sum_probs=116.6
Q ss_pred HHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChh--H--HHHHHHHHHHhhhhhhhhhhhhhhhh-hccCchhHHHHHHH
Q 017795 138 FLLLFFSLVLASGSGLTVIDNLGQICQSLGYADT--S--IYVSMISIWNFLGRVGGGYFSEAIVR-KFAYPRPVAMAVAQ 212 (366)
Q Consensus 138 ~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~~~~--~--~~~sl~~i~~~~g~~~~G~lsD~~gr-r~~~~R~~~~~~~~ 212 (366)
.|+..+..+........+....-++.++++-+.+ - ..++..+++..++.+..|+.+.|.++ |+.+ .++.
T Consensus 36 i~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pl------i~s~ 109 (488)
T KOG2325|consen 36 IYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPL------IVSF 109 (488)
T ss_pred HHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCH------HHHH
Confidence 3444444444433333333334456666443332 2 27888999999999999999999875 3333 6788
Q ss_pred HHHHHHHHHHH-h----c-chhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHH
Q 017795 213 VVMAFALLYYA-I----G-WPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASG 286 (366)
Q Consensus 213 ~~~~~~~~l~~-~----~-~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~ 286 (366)
+++++|.+++. . . ..+.+++++++.|+|.|. .+..=+++++..-.+.|.++++..+.+..+|..+ ||.+...
T Consensus 110 ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n-~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~il-Gp~~q~~ 187 (488)
T KOG2325|consen 110 LIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGN-FAVLRAYIADASTVEDRPRAFAATSGGFVLGIIL-GPTIQLA 187 (488)
T ss_pred HHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCccc-HHHHHHHHHhccCccchHHHHHHhhhHHHHHHHH-hHHHHHH
Confidence 88888888762 1 2 345778899999999876 5777788888776777777777777766666664 6654433
Q ss_pred HhhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHHhhc
Q 017795 287 IYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHRT 350 (366)
Q Consensus 287 l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~~ 350 (366)
+.. -+.+.-- ..+ -.-=+-|...-|+++.++++.++...++.++.
T Consensus 188 f~~-Lg~~G~~--------i~~----------~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~ 232 (488)
T KOG2325|consen 188 FTP-LGEKGFM--------ILP----------GLIFNMYTAPAWLMAILWIIYIVIILFFFKEV 232 (488)
T ss_pred Hhh-hcCCceE--------EcC----------cceEEecchHHHHHHHHHHHHHHHHHhheeec
Confidence 221 1100000 000 00001377888899999999888877776664
No 231
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=97.62 E-value=0.00016 Score=71.32 Aligned_cols=138 Identities=15% Similarity=0.107 Sum_probs=79.3
Q ss_pred HHHhcHHHHHH----HhCCChh--HHHHHHHHHHHhhhhhhhhhhhhhhhhhccC-chh----HHHHHHHHHHHHHHHHH
Q 017795 154 TVIDNLGQICQ----SLGYADT--SIYVSMISIWNFLGRVGGGYFSEAIVRKFAY-PRP----VAMAVAQVVMAFALLYY 222 (366)
Q Consensus 154 ~~~~~l~~i~~----~~g~~~~--~~~~sl~~i~~~~g~~~~G~lsD~~grr~~~-~R~----~~~~~~~~~~~~~~~l~ 222 (366)
++..|.|.+.. -.|++.. .++..+...++.+|.+.+|.++|++.|+..- .|. .....+..+.+....++
T Consensus 262 s~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~ 341 (493)
T KOG1330|consen 262 SLSWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLF 341 (493)
T ss_pred ccchhhhhHHHHHHHHhCCccccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHH
Confidence 34455555443 2344432 2388888899999999999999998763321 011 11111222222222222
Q ss_pred HhcchhHHHHHHHHHHHH---hhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhh-hHHHhhhhHHHHHhhhhh
Q 017795 223 AIGWPGEIYVTTVLVGLS---YGAHWAIVPAAASELFGLKSFGALYNFLTLASPA-GSLIFSGVIASGIYDYYA 292 (366)
Q Consensus 223 ~~~~~~~l~~~~~l~G~~---~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~-G~~i~gp~i~G~l~d~~~ 292 (366)
........+.+.+++.+| .-..|+....+..+..++++|.+++++..+..-+ |.+ -+|++.|.+.|+--
T Consensus 342 ~~~~~~s~~~~~il~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~-~~p~ivGilsd~l~ 414 (493)
T KOG1330|consen 342 PAFTSSSMIFGLILFLVGETISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEHIFGDA-ASPYIVGILSDKLR 414 (493)
T ss_pred HhhhhHHHHHHHHHHHHHHHHHhcccccccceeeEecCcccccHHHHHHHHHHHHhccC-CCcceehhHHHHhh
Confidence 221222333333333333 2233555566778889999999999998776554 555 36779999998753
No 232
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=97.61 E-value=0.0017 Score=68.15 Aligned_cols=72 Identities=15% Similarity=0.238 Sum_probs=58.2
Q ss_pred CHHHHhhhhHHHHHHHHHHHhhhhHHHHHhcHHHHHHH-hCCChhHH--HHHHHHH-HHhhhhhhhhhhhhhhhhh
Q 017795 128 TLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISI-WNFLGRVGGGYFSEAIVRK 199 (366)
Q Consensus 128 ~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~-~g~~~~~~--~~sl~~i-~~~~g~~~~G~lsD~~grr 199 (366)
.++++++++.+|...+..++.......+..++|.+.++ +|++...+ +.++..+ +..+|.+++|+++||++.+
T Consensus 322 ~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~ 397 (633)
T TIGR00805 322 IIKRLLCNPIYMLVILAQVIDSLAFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLN 397 (633)
T ss_pred HHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeeccc
Confidence 35678899999999999888888888899999999875 89987766 4444454 5578999999999999754
No 233
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.37 E-value=0.0055 Score=52.44 Aligned_cols=108 Identities=7% Similarity=0.055 Sum_probs=77.7
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHhhhhhhhHHHHHH
Q 017795 174 YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAIGWPGEIYVTTVLVGLSYGAHWAIVPAAAS 253 (366)
Q Consensus 174 ~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~l~G~~~g~~~~~~~~~~s 253 (366)
-.++......+..++.+.+.+++|.|+.+ .++.+..++-.......+...++.+.++.|++.+..|+....++.
T Consensus 42 slai~Y~~~~~s~l~~P~iv~~lg~K~sm------~lg~~~y~~y~~~~~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt 115 (156)
T PF05978_consen 42 SLAILYGSFAISCLFAPSIVNKLGPKWSM------ILGSLGYAIYIASFFYPNSYTLYPASALLGFGAALLWTAQGTYLT 115 (156)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHhhHHHH------HHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhhhHHhhHhhhHHHH
Confidence 45555556667777788888999887654 555444443333333455677889999999999999999999999
Q ss_pred HhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHh
Q 017795 254 ELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIY 288 (366)
Q Consensus 254 e~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~ 288 (366)
+....+.+++..++.......+.++ |.++.-.++
T Consensus 116 ~~s~~~~~~~~~~ifw~i~~~s~i~-G~~~~~~~~ 149 (156)
T PF05978_consen 116 SYSTEETIGRNTGIFWAIFQSSLIF-GNLFLFFIF 149 (156)
T ss_pred HcCCHHHHhhHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 9888888999888887777776664 655544443
No 234
>PRK03612 spermidine synthase; Provisional
Probab=97.30 E-value=0.033 Score=57.06 Aligned_cols=142 Identities=19% Similarity=0.216 Sum_probs=69.1
Q ss_pred HHhhhhHHHHHhcHHHHH-HHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHH
Q 017795 146 VLASGSGLTVIDNLGQIC-QSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYY 222 (366)
Q Consensus 146 ~~~~~~~~~~~~~l~~i~-~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~ 222 (366)
++..++++.+-.....+. .-+|.+.... .++++.++..+|..++|++.++..++... .-+.++.+......++.
T Consensus 24 f~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~~---~e~~i~l~~~~~~~ll~ 100 (521)
T PRK03612 24 FVCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFVA---VELLLALLGGLSALILY 100 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHH---HHHHHHHHHHHHHHHHH
Confidence 333444444433333333 2345554333 67777777778887777765333222211 00011111111111111
Q ss_pred H-hcc--h--hHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhh-hhh
Q 017795 223 A-IGW--P--GEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYD-YYA 292 (366)
Q Consensus 223 ~-~~~--~--~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d-~~~ 292 (366)
. ... . ...+...++.++..|+.+++..-+..+.. .++.|...|-++.+..+|+.+ |.++.|++.- ..|
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~~-~~~~g~~~g~ly~~ntlGa~~-G~l~~~~vLlp~lG 174 (521)
T PRK03612 101 AAFAFQGLSRLLLYVLVLLIGLLIGMEIPLLMRILQRIR-DQHLGHNVATVLAADYLGALV-GGLAFPFLLLPRLG 174 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccchhhhhhhhHhHHhHHHHH-HHHHHHHHHHHhcc
Confidence 1 111 1 12234445567777877766655544422 223556667777777778885 7777776654 444
No 235
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=97.20 E-value=0.026 Score=57.26 Aligned_cols=145 Identities=11% Similarity=0.015 Sum_probs=89.8
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHh--cchhHH-HHHHHHHHHHhhhhhhhHHH
Q 017795 174 YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAI--GWPGEI-YVTTVLVGLSYGAHWAIVPA 250 (366)
Q Consensus 174 ~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~--~~~~~l-~~~~~l~G~~~g~~~~~~~~ 250 (366)
..++..+...+-.|+.|.++|+-++|+.+ +.+..++..++..++.. .....+ .+..++.-++++.......+
T Consensus 75 ~~sis~l~~all~P~lGa~aD~~~~Rk~~-----l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna 149 (477)
T PF11700_consen 75 ANSISGLLQALLAPFLGAIADYGGRRKRF-----LLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNA 149 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHcccccchHH-----HHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46666777788889999999988876543 33333333333333332 222222 22333334577777888889
Q ss_pred HHHHhhCCCch--------------------------hhHHHHHHhHhhhhHHHhhhhHHHHHh-hhhhhhhhhhhhhcc
Q 017795 251 AASELFGLKSF--------------------------GALYNFLTLASPAGSLIFSGVIASGIY-DYYAEKQAGLLWKYN 303 (366)
Q Consensus 251 ~~se~f~~~~~--------------------------g~~~g~~~~~~~~G~~i~gp~i~G~l~-d~~~~~~~~~~~~~~ 303 (366)
+.+|+-..+.. +...|.....+.+|+.+ . ++...+. ...+..
T Consensus 150 ~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v-~-l~i~l~~~~~~~~~--------- 218 (477)
T PF11700_consen 150 YLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLV-A-LLISLLLVISPGST--------- 218 (477)
T ss_pred HhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHH-H-HHHHHHHHHcCCCc---------
Confidence 99999988888 89999988888899886 2 3333222 222100
Q ss_pred CCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHHhh
Q 017795 304 GNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHR 349 (366)
Q Consensus 304 ~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~ 349 (366)
-.+..+.|.++.+.++..++-.+..++..++
T Consensus 219 ---------------~~~~~~~r~~~~~~a~ww~vfsiP~~~~~~~ 249 (477)
T PF11700_consen 219 ---------------ASNTWAIRVAFLIVALWWLVFSIPLFLWLPD 249 (477)
T ss_pred ---------------cccchhhhHHHHHHHHHHHHHHHHHHHhCCC
Confidence 0111247889888888777666666555443
No 236
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.18 E-value=0.0018 Score=48.49 Aligned_cols=53 Identities=13% Similarity=0.160 Sum_probs=43.4
Q ss_pred hhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccC
Q 017795 150 GSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAY 202 (366)
Q Consensus 150 ~~~~~~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~ 202 (366)
++...+...+|.+.++.|++..++ ..++..+...++.+++|.++||+++++..
T Consensus 14 ~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~ 68 (77)
T PF12832_consen 14 AALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVI 68 (77)
T ss_pred HHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHH
Confidence 333345667888899999999887 78888899999999999999999986544
No 237
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=97.17 E-value=0.087 Score=53.59 Aligned_cols=119 Identities=14% Similarity=0.069 Sum_probs=77.4
Q ss_pred CCChhHH-HHHHHHHHHhhhhhhhhhhhhhhhhh-ccCchhHHHHHHHHHHHHHHHHHHh----------cchhHHHHHH
Q 017795 167 GYADTSI-YVSMISIWNFLGRVGGGYFSEAIVRK-FAYPRPVAMAVAQVVMAFALLYYAI----------GWPGEIYVTT 234 (366)
Q Consensus 167 g~~~~~~-~~sl~~i~~~~g~~~~G~lsD~~grr-~~~~R~~~~~~~~~~~~~~~~l~~~----------~~~~~l~~~~ 234 (366)
|++-... +.++-.++-.+..|+.+++=.|..|| +..+.+.=+.+++++++++++++.. .++..+.+..
T Consensus 305 g~~ip~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~ 384 (493)
T PRK15462 305 GYTVPTAMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGL 384 (493)
T ss_pred ceeeCHHHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHH
Confidence 5443233 66777777777777777765666432 2112233357788888888766531 1223456667
Q ss_pred HHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHh-hhhHHHhhhhHHHH
Q 017795 235 VLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLAS-PAGSLIFSGVIASG 286 (366)
Q Consensus 235 ~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~-~~G~~i~gp~i~G~ 286 (366)
++.++|--...++..+.++++.|.+.+|..+|...+.. .+|..+ +..+++.
T Consensus 385 ~~~t~gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~~~~-~g~~~~~ 436 (493)
T PRK15462 385 AVMGFAELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANYL-AGVIADQ 436 (493)
T ss_pred HHHHHHHHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH
Confidence 77788877778888999999999999999999986643 555554 4444443
No 238
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=97.14 E-value=0.0026 Score=62.04 Aligned_cols=102 Identities=16% Similarity=0.253 Sum_probs=81.4
Q ss_pred HHHHHHHHHHHHHHH--h-c-ch------hHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCC---chhhHHHHHHhHhhhh
Q 017795 209 AVAQVVMAFALLYYA--I-G-WP------GEIYVTTVLVGLSYGAHWAIVPAAASELFGLK---SFGALYNFLTLASPAG 275 (366)
Q Consensus 209 ~~~~~~~~~~~~l~~--~-~-~~------~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~---~~g~~~g~~~~~~~~G 275 (366)
..+.++.++|++++. . . .. ..++++..++++|.|+.=+...+..+|.|..+ ++...++....+.++|
T Consensus 5 ~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G 84 (372)
T PF00854_consen 5 LLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINIG 84 (372)
T ss_dssp HHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhhh
Confidence 567777788887743 1 1 11 36889999999999999999999999999876 3788889999999999
Q ss_pred HHHhhhhHHHHHhhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHH
Q 017795 276 SLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMS 343 (366)
Q Consensus 276 ~~i~gp~i~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~ 343 (366)
+++ ++.+.+++-+..+ |.+.|.+.++..+++.+..
T Consensus 85 ~~~-~~~~~~~i~~~~~--------------------------------~~~~f~i~~~~~~~~~~~f 119 (372)
T PF00854_consen 85 SLF-SPTLVPYIQQNYG--------------------------------WFLGFGIPAIGMLLALIVF 119 (372)
T ss_dssp HHH-HHHCCCHHHHCS---------------------------------HHHHHHHHHHHHHHHHHHH
T ss_pred hHh-hcccchhhccccc--------------------------------hhhhhhHHHHHHHHHHHHH
Confidence 996 8999999998877 9999998887776655543
No 239
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.08 E-value=0.0055 Score=59.40 Aligned_cols=124 Identities=10% Similarity=0.113 Sum_probs=85.2
Q ss_pred HHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH-hcchhHHHHHHHHHHHH
Q 017795 164 QSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IGWPGEIYVTTVLVGLS 240 (366)
Q Consensus 164 ~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~G~~ 240 (366)
..+||++.+. +.+..++...+.+....+..|+... .-...+...+.++...++++. ...+..++.+..+..++
T Consensus 290 ~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~----~~~a~l~~~l~~~vP~~llls~~~~~~~l~~~s~l~sf~ 365 (451)
T KOG2615|consen 290 GRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKG----NIKAVLLFSLLLIVPAFLLLSLARTPVVLYLGSTLKSFS 365 (451)
T ss_pred CccCCChhhheeeeehhhHHHHHHHHhcccccccccc----chhhHHHHHHHHHHHHHHHHhccccchhhhHHHHHHHHH
Confidence 4578887665 5555555555555544444454421 111223445555555555555 44566788888888888
Q ss_pred hhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhh
Q 017795 241 YGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYA 292 (366)
Q Consensus 241 ~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~ 292 (366)
.....+-...++....|.+.+|++.|+....+.++-++ ||.++|.+.....
T Consensus 366 ~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRai-GPlv~g~i~~Ws~ 416 (451)
T KOG2615|consen 366 TASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAI-GPLVSGVIFSWSQ 416 (451)
T ss_pred HHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHh-hhhhhheeEEEec
Confidence 77766667778888888899999999999999999996 9999998876543
No 240
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=97.00 E-value=0.00042 Score=64.52 Aligned_cols=148 Identities=16% Similarity=0.139 Sum_probs=100.1
Q ss_pred HHHHHHHHHHHhhhhHHHHHhcHHHHHHH----hCCChhHH--HHHHHHHHHhhhhhhhhhhhhhh-hhhccCchhHHHH
Q 017795 137 DFLLLFFSLVLASGSGLTVIDNLGQICQS----LGYADTSI--YVSMISIWNFLGRVGGGYFSEAI-VRKFAYPRPVAMA 209 (366)
Q Consensus 137 ~~~ll~~~~~~~~~~~~~~~~~l~~i~~~----~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~-grr~~~~R~~~~~ 209 (366)
+|..+.++.+.+.++...+. +-..+-.+ ...+.++. .-+.++.-|.+-.+++|++.||. |-|... .
T Consensus 42 r~m~lv~mc~lgfgsyfcyd-~p~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gt------i 114 (459)
T KOG4686|consen 42 RFMALVFMCLLGFGSYFCYD-APGALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGT------I 114 (459)
T ss_pred HHHHHHHHHHhcccceeecC-CchhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHH------H
Confidence 45555555556655544443 22222222 23333332 66777877888999999999984 554433 3
Q ss_pred HHHHHHHHHHHHHHhc----chhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHH
Q 017795 210 VAQVVMAFALLYYAIG----WPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIAS 285 (366)
Q Consensus 210 ~~~~~~~~~~~l~~~~----~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G 285 (366)
+...+.++|.++++.+ ..+.+..+++++|+|.-..-.....++.-.|-.|+.+..+|+......+|+.+ .=.+.+
T Consensus 115 i~~~fv~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~Gstv-Nf~lm~ 193 (459)
T KOG4686|consen 115 ILCIFVFLGQLIFAAGGISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTV-NFLLMP 193 (459)
T ss_pred HHHHHHHHHHHHHHhchHHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhcee-eeeecH
Confidence 4445555666666532 23567788999998865544555667778899999999999999999999996 788899
Q ss_pred HHhhhhh
Q 017795 286 GIYDYYA 292 (366)
Q Consensus 286 ~l~d~~~ 292 (366)
++||+.+
T Consensus 194 ~ly~~~~ 200 (459)
T KOG4686|consen 194 FLYDTMG 200 (459)
T ss_pred HHHHHHH
Confidence 9999876
No 241
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=96.55 E-value=0.018 Score=54.82 Aligned_cols=64 Identities=5% Similarity=-0.052 Sum_probs=57.2
Q ss_pred chhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhh
Q 017795 226 WPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDY 290 (366)
Q Consensus 226 ~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~ 290 (366)
+...++++.++.|.|.+...+...++++++.++++.+...|+......+|+.+ ||.+++.+...
T Consensus 9 ~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~-gP~i~~~~i~~ 72 (310)
T TIGR01272 9 YYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTV-APLFGGSLILS 72 (310)
T ss_pred HHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHH-HHHHHHHHHhc
Confidence 34567788889999999999999999999999999999999999999999996 99999988854
No 242
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.55 E-value=0.064 Score=56.50 Aligned_cols=69 Identities=17% Similarity=0.229 Sum_probs=54.4
Q ss_pred CHHHHhhhhHHHHHHHHHHHhhhhHHHHHhcHHHHHHH-hCCChhHH--HHHHHHH-HHhhhhhhhhhhhhhh
Q 017795 128 TLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISI-WNFLGRVGGGYFSEAI 196 (366)
Q Consensus 128 ~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~-~g~~~~~~--~~sl~~i-~~~~g~~~~G~lsD~~ 196 (366)
+++++++++.|.+..++..+-.....++..++|-+++. +|.+.+.+ +.+...+ +..+|-+++|++.-|+
T Consensus 384 s~~~ll~N~if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkf 456 (735)
T KOG3626|consen 384 SIKRLLSNPIFMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKF 456 (735)
T ss_pred HHHHHhcCchHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeee
Confidence 57788999999988888888888888899999998864 79887766 4544444 4457888899988776
No 243
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=96.41 E-value=0.0008 Score=69.11 Aligned_cols=72 Identities=22% Similarity=0.244 Sum_probs=0.0
Q ss_pred CCCHHHHhhhhHHHHHHHHHHHhhhhHHHHHhcHHHHHHH-hCCChhHH--HHHHHHH-HHhhhhhhhhhhhhhhh
Q 017795 126 DFTLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISI-WNFLGRVGGGYFSEAIV 197 (366)
Q Consensus 126 ~~~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~-~g~~~~~~--~~sl~~i-~~~~g~~~~G~lsD~~g 197 (366)
...++++++|+.|....++..+-.....++..++|.+++. ++.+.+.+ +.....+ +.++|.+++|++..|+.
T Consensus 295 ~~~l~~Ll~Np~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~k 370 (539)
T PF03137_consen 295 PKALKRLLTNPVFMCLILAGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFK 370 (539)
T ss_dssp ----------------------------------------------------------------------------
T ss_pred HHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEec
Confidence 3467889999999888888877777777888999998865 78876655 4444443 56788999999988873
No 244
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=96.36 E-value=0.00065 Score=69.80 Aligned_cols=173 Identities=14% Similarity=0.106 Sum_probs=2.6
Q ss_pred HHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHhcc------
Q 017795 155 VIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAIGW------ 226 (366)
Q Consensus 155 ~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~~~------ 226 (366)
+...+.++-+.++++++++ +.+.+-+++.+..++..+..+|- .|+.++.++.+++++|.++++.++
T Consensus 22 ~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~------hrprwig~g~~~~~~g~~l~~lPhf~~~~y 95 (539)
T PF03137_consen 22 VNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRG------HRPRWIGIGALLMGLGSLLFALPHFLSGPY 95 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhc------CCcceeeecHHHHHHHHHHHhccHhhcCCC
Confidence 4455777888899988776 77777788887777777665553 355566788888888777653110
Q ss_pred ---------------------------------------------hhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCch
Q 017795 227 ---------------------------------------------PGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSF 261 (366)
Q Consensus 227 ---------------------------------------------~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~ 261 (366)
...++++-++.|+|....+++..+++-|...+++.
T Consensus 96 ~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~s 175 (539)
T PF03137_consen 96 SYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNS 175 (539)
T ss_dssp --------------------------------------------------------SSS---------------------
T ss_pred ccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccC
Confidence 01234556778888888899999999999999999
Q ss_pred hhHHHHHHhHhhhhHHHhhhhHHHHHhhhhhhhhhhhhhhccCCCCCcccCCC--CCCcccCCc---chHHHHHHHHHHH
Q 017795 262 GALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQ--ETPTCLGSI---CYSITCGIMAGLC 336 (366)
Q Consensus 262 g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~c~g~~---~~~~~f~i~~~~~ 336 (366)
+...|++.....+|..+ |=.++|.....+... ...+. -+.+=..++ .|-..|.+.+.+.
T Consensus 176 plYiGi~~~~~~lGPa~-Gf~lg~~~L~~yvD~---------------~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~ 239 (539)
T PF03137_consen 176 PLYIGILYAMSILGPAL-GFLLGSFCLRIYVDF---------------PKVPPDGVGITPSDPRWVGAWWLGFLICGILL 239 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccchhhhhHHhhccHHH-HHHHHHHHHhceeCC---------------ccccccCCCCCCCCccHHHHHHHHHHHHHHHH
Confidence 99999999988888885 766666655443200 00000 011111111 3666777788777
Q ss_pred HHHHHHHHHHHhh
Q 017795 337 IIAMVMSLIVVHR 349 (366)
Q Consensus 337 ~~~~~~~~~~~~~ 349 (366)
++.++..+.+.++
T Consensus 240 ~l~aipl~~FPk~ 252 (539)
T PF03137_consen 240 FLSAIPLFFFPKK 252 (539)
T ss_dssp -------------
T ss_pred HHHHHHHHcCCcc
Confidence 7777666666544
No 245
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=96.35 E-value=0.22 Score=50.31 Aligned_cols=45 Identities=11% Similarity=0.143 Sum_probs=39.6
Q ss_pred hhh-hHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhh
Q 017795 244 HWA-IVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYD 289 (366)
Q Consensus 244 ~~~-~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d 289 (366)
..+ +.|+.+.|++..++..+.|++...++++|.++ ||.+..++.+
T Consensus 145 vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~-sg~~~~~~~~ 190 (472)
T TIGR00769 145 VLSLLFWGFANQITTIDEAKRFYALFGLGANVALIF-SGRTIKYFSK 190 (472)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 344 78899999999999999999999999999996 8888888764
No 246
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=96.19 E-value=0.058 Score=53.09 Aligned_cols=152 Identities=9% Similarity=-0.066 Sum_probs=91.4
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH--hc-chh-HHHHHHHHHHHHhhhhhhhHH
Q 017795 174 YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA--IG-WPG-EIYVTTVLVGLSYGAHWAIVP 249 (366)
Q Consensus 174 ~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~--~~-~~~-~l~~~~~l~G~~~g~~~~~~~ 249 (366)
..++..+..++-.|..|.++|+.|+|+.. +.....+..+..+++. .. ++. ...+...+...++........
T Consensus 63 ~~aia~llia~LapiLG~iaD~~g~Rk~~-----~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfyd 137 (438)
T COG2270 63 ASAIAGLLIALLAPILGTIADYPGPRKKF-----FGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFYD 137 (438)
T ss_pred HHHHHHHHHHHHHHHhhhhhccCCCcchH-----HHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheehh
Confidence 45566666677788889999999987654 2333333333333333 22 222 334445566777777778888
Q ss_pred HHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHH---HHhh-hhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcch
Q 017795 250 AAASELFGLKSFGALYNFLTLASPAGSLIFSGVIAS---GIYD-YYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICY 325 (366)
Q Consensus 250 ~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G---~l~d-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~ 325 (366)
++.+++..+++.+...|+....+.+|+.+ +.+.. .+.. ..+..+. .. .+.-.....-
T Consensus 138 s~L~~~~~k~~~~riS~lg~~~gylgs~i--~li~~~~~~~~~~~~~~~~~-----l~------------~l~~~~~~~~ 198 (438)
T COG2270 138 SMLPRLTTKDNMGRISGLGWALGYLGSVI--LLIFVVLGFALGQQTGITII-----LL------------GLPPADGEDV 198 (438)
T ss_pred hHhhhhcCccccCcccccccccccccchH--HHHHHHHHHhcccccceeEE-----ee------------ccCccccccc
Confidence 99999999988888888887778888875 44443 1111 1111110 00 0000111235
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhh
Q 017795 326 SITCGIMAGLCIIAMVMSLIVVHR 349 (366)
Q Consensus 326 ~~~f~i~~~~~~~~~~~~~~~~~~ 349 (366)
|.++.+.++..++-.+..+...++
T Consensus 199 ri~~~l~A~W~li~~iPm~~~v~~ 222 (438)
T COG2270 199 RITGLLAALWWLLFALPMILNVHD 222 (438)
T ss_pred hhHHHHHHHHHHHHHhHHHhcccc
Confidence 888888888888877777766543
No 247
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=96.06 E-value=0.44 Score=47.04 Aligned_cols=103 Identities=20% Similarity=0.212 Sum_probs=71.0
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH----hcchhHHHHHHHHHHHHhhhhhhhHH
Q 017795 174 YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA----IGWPGEIYVTTVLVGLSYGAHWAIVP 249 (366)
Q Consensus 174 ~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~----~~~~~~l~~~~~l~G~~~g~~~~~~~ 249 (366)
+..++.++.+++|--.-.+ | .+|.+.+.+.+.+..+.+++-+ ..+.+.+++..+..|+..|+.+...+
T Consensus 286 Y~~~YQ~GVFISRSS~~~~-----r---ir~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YVNtF 357 (402)
T PF02487_consen 286 YQLLYQLGVFISRSSLPFF-----R---IRRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYVNTF 357 (402)
T ss_pred HHHHHHHHHhhhhcceeee-----e---hhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 6667777777777543222 2 2344555665555544433322 23445556677778999999999999
Q ss_pred HHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHH
Q 017795 250 AAASELFGLKSFGALYNFLTLASPAGSLIFSGVIAS 285 (366)
Q Consensus 250 ~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G 285 (366)
..++|-.++++|--++|....+-.+|-.+ +..++-
T Consensus 358 ~~I~~~~~~~~REFslg~vsvsds~GI~l-Agll~l 392 (402)
T PF02487_consen 358 YRISEEVPPEDREFSLGAVSVSDSLGILL-AGLLGL 392 (402)
T ss_pred HHHHhcCCHHHHHHHHHHHHHHhhHHHHH-HHHHHH
Confidence 99999899999999999999999988885 555443
No 248
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=96.00 E-value=0.13 Score=51.19 Aligned_cols=109 Identities=7% Similarity=-0.012 Sum_probs=70.7
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH-hcch---h-----HHHHHHHHHHHHhhhh
Q 017795 174 YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IGWP---G-----EIYVTTVLVGLSYGAH 244 (366)
Q Consensus 174 ~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~-~~~~---~-----~l~~~~~l~G~~~g~~ 244 (366)
...++.+......+.+-|+-|++|-|... .++..+.++|..+=. ...+ . ....+..+.+...-..
T Consensus 84 lsmIym~v~vp~gf~~mw~ldk~GLR~a~------llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fi 157 (480)
T KOG2563|consen 84 LSMIYMVVSVPFGFAAMWILDKFGLRTAL------LLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFI 157 (480)
T ss_pred HHHHHHHHHHHHhhHHHHhhcccchHHHH------HHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHh
Confidence 66667777788888888999999887655 677777787766622 2112 1 2234444444333222
Q ss_pred hhhHHH-HHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhh
Q 017795 245 WAIVPA-AASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDY 290 (366)
Q Consensus 245 ~~~~~~-~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~ 290 (366)
-..|+ +.+-.|++++|+++..+..++.++|..+ |-++...+..+
T Consensus 158 -m~lPskiA~~WF~~~qra~A~~~~v~~n~LGvav-g~llppilV~~ 202 (480)
T KOG2563|consen 158 -LGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAV-GFLLPPILVPS 202 (480)
T ss_pred -hccccHHHHhhCCcchhhhhhhHHHhcchHHHHH-HhhccceecCC
Confidence 22233 5566799999999999999988888885 65555555443
No 249
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.99 E-value=0.86 Score=45.85 Aligned_cols=142 Identities=13% Similarity=0.098 Sum_probs=77.0
Q ss_pred HHhhhhHHHHHHHHHHHhhhhHHHHHhcHHHHHH---HhCCChhHHHHHHH----HHHHhhhhhhhhhhhhhhhhhccCc
Q 017795 131 QALMKADFLLLFFSLVLASGSGLTVIDNLGQICQ---SLGYADTSIYVSMI----SIWNFLGRVGGGYFSEAIVRKFAYP 203 (366)
Q Consensus 131 ~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~---~~g~~~~~~~~sl~----~i~~~~g~~~~G~lsD~~grr~~~~ 203 (366)
++++++.+.+++..++.............|.-.. ..+.+... +..+. .++..++....+.+++|+.+..
T Consensus 235 ~l~~~~~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~-~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg--- 310 (461)
T KOG3098|consen 235 KLLKTPKMLLLFPFFFYTGLETSFWISIYPTCISFTRKLGSNTTY-LIAIYSIGIGLGEVIGGLDFSILSKRIRGFG--- 310 (461)
T ss_pred HHhcCHhHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccCcchh-HHHHHHHHHhHHHHHHHHHHHHHhhhhhhcc---
Confidence 4556677766665555544333333333333221 22332222 33333 3444555566677776653321
Q ss_pred hhHHHHHHHHHHHHHHHHHH--hc--c---------------hhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhH
Q 017795 204 RPVAMAVAQVVMAFALLYYA--IG--W---------------PGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGAL 264 (366)
Q Consensus 204 R~~~~~~~~~~~~~~~~l~~--~~--~---------------~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~ 264 (366)
|...+.++.++-.+++++.. .+ . .....+..++.|++-....+..+.++...+ ++.+..+
T Consensus 311 ~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~-~~~~~~~ 389 (461)
T KOG3098|consen 311 RKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLY-PDDRAQA 389 (461)
T ss_pred cCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHh-cCchHHH
Confidence 11222444444333333322 11 1 124556778889998888888889999999 6777777
Q ss_pred HHHHHhHhhhhHH
Q 017795 265 YNFLTLASPAGSL 277 (366)
Q Consensus 265 ~g~~~~~~~~G~~ 277 (366)
.++.-.-..+++.
T Consensus 390 fsi~kfyq~~~s~ 402 (461)
T KOG3098|consen 390 FSLFKFYQSVASC 402 (461)
T ss_pred HHHHHHHHHHHHH
Confidence 7777666655555
No 250
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=95.91 E-value=0.94 Score=44.87 Aligned_cols=94 Identities=13% Similarity=0.117 Sum_probs=58.2
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH-hcchhHHHHHHHHHHHHhhhhhhhHHHHH
Q 017795 174 YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAA 252 (366)
Q Consensus 174 ~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~ 252 (366)
.-+...+.+.++.+..|++..++.+. ..+.+.+..++.+..+++.. ..+.+..|++-++++..+-...++...-+
T Consensus 290 VeA~~tllgA~~al~~g~v~~~w~~~----~~l~l~~~S~l~a~~L~lm~~t~~Iwv~Y~~yIif~~~y~fliTiA~~qI 365 (412)
T PF01770_consen 290 VEAASTLLGAIAALLAGYVKVNWDRW----GELALGVFSLLQAGLLFLMSFTGNIWVCYAGYIIFRSLYMFLITIASFQI 365 (412)
T ss_pred HHHHHHHHHHHHHHHHhHhhcchHHH----HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555566677777888875444431 12233333344443344444 34556777888888877777777777767
Q ss_pred HHhhCCCchhhHHHHHHhH
Q 017795 253 SELFGLKSFGALYNFLTLA 271 (366)
Q Consensus 253 se~f~~~~~g~~~g~~~~~ 271 (366)
+.....+.+|..+|+-+..
T Consensus 366 A~~l~~e~yaLVFGiNtf~ 384 (412)
T PF01770_consen 366 AKNLSEERYALVFGINTFV 384 (412)
T ss_pred HHhccccceeeeeeeHHHH
Confidence 7777778888888875543
No 251
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=95.83 E-value=1.5 Score=43.84 Aligned_cols=189 Identities=12% Similarity=0.056 Sum_probs=94.9
Q ss_pred HHHHHHHHHHhhhhHHHHHhcHHHHHHHhCC-C--hhHHHHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHH-HHHH
Q 017795 138 FLLLFFSLVLASGSGLTVIDNLGQICQSLGY-A--DTSIYVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMA-VAQV 213 (366)
Q Consensus 138 ~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~-~--~~~~~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~-~~~~ 213 (366)
.|.++...++.....-+..+..|-++.+..- + ....+.-.-.+..++..+..|...||..|.+..+...+.- ....
T Consensus 4 ~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~ 83 (432)
T PF06963_consen 4 LWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVA 83 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHH
Confidence 4566677777766666676777777766521 1 1222333334455666677788889988876653222211 1222
Q ss_pred HHHHHHHHHH-hcch----hHHHHHH--HHHHHHhhhh-hhhHHHH------HHHhhC--CCchhhHHHHHHhHhhhhHH
Q 017795 214 VMAFALLYYA-IGWP----GEIYVTT--VLVGLSYGAH-WAIVPAA------ASELFG--LKSFGALYNFLTLASPAGSL 277 (366)
Q Consensus 214 ~~~~~~~l~~-~~~~----~~l~~~~--~l~G~~~g~~-~~~~~~~------~se~f~--~~~~g~~~g~~~~~~~~G~~ 277 (366)
+.++.++.+. .... ....... ++..+|.-.. .+....+ +..+.+ +.......+.+--.=-+..+
T Consensus 84 ~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckl 163 (432)
T PF06963_consen 84 ASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKL 163 (432)
T ss_pred HHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHH
Confidence 2222222222 1111 1222211 1122221111 1111111 112221 11232223333323334455
Q ss_pred HhhhhHHHHHhhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHH
Q 017795 278 IFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHRTKSVYAQL 357 (366)
Q Consensus 278 i~gp~i~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~~r~~~~~~ 357 (366)
++|++.|.+.+..+ +..+..+.++..+++..+=.++..+..+....+
T Consensus 164 -laPl~vG~l~t~~s--------------------------------~~~~~~~i~~~N~~S~~vEy~~l~~VY~~~P~L 210 (432)
T PF06963_consen 164 -LAPLFVGLLMTFAS--------------------------------PVIAAIFIAGWNLASVFVEYFLLARVYNSVPAL 210 (432)
T ss_pred -HHHHHHHHHhhccC--------------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHh
Confidence 59999999998776 777888888888888888777766654444444
Q ss_pred hh
Q 017795 358 YG 359 (366)
Q Consensus 358 ~~ 359 (366)
..
T Consensus 211 ~~ 212 (432)
T PF06963_consen 211 AV 212 (432)
T ss_pred cC
Confidence 33
No 252
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=95.82 E-value=0.68 Score=46.67 Aligned_cols=120 Identities=14% Similarity=0.117 Sum_probs=80.9
Q ss_pred hCCChhHH-HHHHHHHHHhhhhhhhhhhhhhhhhhccCch-hHHHHHHHHHHHHHHHHHHh-----cc------hhHHHH
Q 017795 166 LGYADTSI-YVSMISIWNFLGRVGGGYFSEAIVRKFAYPR-PVAMAVAQVVMAFALLYYAI-----GW------PGEIYV 232 (366)
Q Consensus 166 ~g~~~~~~-~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R-~~~~~~~~~~~~~~~~l~~~-----~~------~~~l~~ 232 (366)
+|++-... +-++-.++-.+..|+..++--+.++++.-+| +.-+.+++.+++.+++++.. .+ ...++.
T Consensus 320 ~g~~vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil 399 (498)
T COG3104 320 FGFEVPPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVL 399 (498)
T ss_pred cceecCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHH
Confidence 34443333 7777777778888877777777666644443 33456677777777666431 11 234566
Q ss_pred HHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHH
Q 017795 233 TTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASG 286 (366)
Q Consensus 233 ~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~ 286 (366)
..++.++|--...++.-+.+..+-|++-.+..++...+....|..+ +..+++.
T Consensus 400 ~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l-~g~va~~ 452 (498)
T COG3104 400 SYVLQSFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTL-GGQVAGL 452 (498)
T ss_pred HHHHHHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHh-hceeccc
Confidence 6777888876667777788888888877888888888887777775 6666663
No 253
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=95.55 E-value=0.16 Score=50.96 Aligned_cols=103 Identities=13% Similarity=0.120 Sum_probs=61.1
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHH-HHHHHHHHHHHHHHHHh----------cchhHHHHHHHHHHHHhh
Q 017795 174 YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVA-MAVAQVVMAFALLYYAI----------GWPGEIYVTTVLVGLSYG 242 (366)
Q Consensus 174 ~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~-~~~~~~~~~~~~~l~~~----------~~~~~l~~~~~l~G~~~g 242 (366)
...+++++..+||.+..+.. .-.+| +|.++ ..+.=++....++++.. .+....++..+++|+..|
T Consensus 312 ~~~~fNvgD~vGR~~~~~~~-~p~~~---~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltnG 387 (437)
T TIGR00939 312 CFLLFNLFDWLGRSLTSKFM-WPDED---SRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSNG 387 (437)
T ss_pred HHHHHHHHHHHHhhhhheeE-eeCCC---ccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhhh
Confidence 78888999999999665431 11111 11111 22222333333333322 233445667888898888
Q ss_pred hhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhh
Q 017795 243 AHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSG 281 (366)
Q Consensus 243 ~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp 281 (366)
-..++.....++...++++-.+-++++.+-.+|-.+ |.
T Consensus 388 y~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~-Gs 425 (437)
T TIGR00939 388 YLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLAL-GA 425 (437)
T ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHH-HH
Confidence 776766666777777777877777777776666664 44
No 254
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.53 E-value=0.052 Score=57.16 Aligned_cols=174 Identities=15% Similarity=0.113 Sum_probs=113.9
Q ss_pred HHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHhcc-----
Q 017795 154 TVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAIGW----- 226 (366)
Q Consensus 154 ~~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~~~----- 226 (366)
.+...+.++-+-++.+++.. +.+.+-+++.+.-.+..+..-|..| +.++.++.++++++.++.+..+
T Consensus 115 y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~Hr------Pr~Ig~G~~~m~lgsll~alPHf~~~~ 188 (735)
T KOG3626|consen 115 YFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHR------PRWIGIGLVLMGLGSLLFALPHFFSGP 188 (735)
T ss_pred hhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCc------cceeeechhHHHHHHHHHhChHHhcCc
Confidence 34455666777788877655 5677777777777777766555533 3344667777777666643210
Q ss_pred --------------h---------------------------------h-HHHHHHHHHHHHhhhhhhhHHHHHHHhhCC
Q 017795 227 --------------P---------------------------------G-EIYVTTVLVGLSYGAHWAIVPAAASELFGL 258 (366)
Q Consensus 227 --------------~---------------------------------~-~l~~~~~l~G~~~g~~~~~~~~~~se~f~~ 258 (366)
+ . .++++-++.|+|....+++..+++-|....
T Consensus 189 y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~ 268 (735)
T KOG3626|consen 189 YEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKK 268 (735)
T ss_pred chhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccc
Confidence 0 1 233455677888888889999999999999
Q ss_pred CchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCc---chHHHHHHHHHH
Q 017795 259 KSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSI---CYSITCGIMAGL 335 (366)
Q Consensus 259 ~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~---~~~~~f~i~~~~ 335 (366)
++-....|++.....+|.++ |=.+++++...+... + ......+-..|+ .|...|++.+.+
T Consensus 269 ~~SplYlgi~~~~~~lGPai-GfllgS~~l~lYvD~--------------~--~~~~~it~~DPrWIGAWWlGFLi~g~~ 331 (735)
T KOG3626|consen 269 KNSPLYLGILYSMAILGPAI-GFLLGSFCLKLYVDF--------------G--LSPIGITPTDPRWIGAWWLGFLICGAL 331 (735)
T ss_pred cCCcHHHHHHHHHHHhhhHH-HHHHHHHHHHeeecc--------------c--cCCCCCCCCCcchhhHHHHHHHHHHHH
Confidence 99999999999988888885 777777766554311 0 000111112222 478888888888
Q ss_pred HHHHHHHHHHHHhhc
Q 017795 336 CIIAMVMSLIVVHRT 350 (366)
Q Consensus 336 ~~~~~~~~~~~~~~~ 350 (366)
.++.++..+.+.++.
T Consensus 332 ~~~~a~p~f~fPk~l 346 (735)
T KOG3626|consen 332 LLFSAVPLFFFPKEL 346 (735)
T ss_pred HHHHHHHHHhCcccC
Confidence 888887777765543
No 255
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=95.26 E-value=0.19 Score=50.67 Aligned_cols=120 Identities=16% Similarity=0.237 Sum_probs=92.0
Q ss_pred HhCCChhHH--HHHHHHHHHhhhhhhhh-hhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHhcchh-HHHHHHHHHHHH
Q 017795 165 SLGYADTSI--YVSMISIWNFLGRVGGG-YFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAIGWPG-EIYVTTVLVGLS 240 (366)
Q Consensus 165 ~~g~~~~~~--~~sl~~i~~~~g~~~~G-~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~~~~~-~l~~~~~l~G~~ 240 (366)
.+|++..+. +.++.++...++.++.. .++-.++.|+.. ..++....+..+++++.+.. ..+...++.+ .
T Consensus 271 ~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i------~lGl~~~~~~~~~~af~~~~w~~~~~~v~~~-~ 343 (463)
T KOG2816|consen 271 KFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLI------SLGLLSEFLQLLLFAFATETWMMFAAGVVVA-L 343 (463)
T ss_pred ecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHh------hHHHHHHHHHHHHHHHhccchhhhHHHHHHH-h
Confidence 468887765 77888888888887765 677777776533 77777788888888865544 4455544444 4
Q ss_pred hhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhh
Q 017795 241 YGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYA 292 (366)
Q Consensus 241 ~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~ 292 (366)
.+...+.+-+.++-+.+++++|.++++......+.+.+ +|.+.+.++..+.
T Consensus 344 ~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~-~~~~~~~i~~~t~ 394 (463)
T KOG2816|consen 344 AGIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVV-SPALYGNIFALTL 394 (463)
T ss_pred hcchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhh-hHHHHHHHHHHHH
Confidence 45667888889999999999999999999999999996 8999999987765
No 256
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=95.18 E-value=1.4 Score=40.89 Aligned_cols=141 Identities=10% Similarity=0.096 Sum_probs=64.2
Q ss_pred CCHHHHhhhhHHHHHHHHHHHhhhhHHHH-HhcHHH-HHHHhC-----------CChh-HHHHHHHHHHHhhhhhhhhhh
Q 017795 127 FTLPQALMKADFLLLFFSLVLASGSGLTV-IDNLGQ-ICQSLG-----------YADT-SIYVSMISIWNFLGRVGGGYF 192 (366)
Q Consensus 127 ~~~~~~l~~~~~~ll~~~~~~~~~~~~~~-~~~l~~-i~~~~g-----------~~~~-~~~~sl~~i~~~~g~~~~G~l 192 (366)
.+..+.+|+.+.|...+.+.+........ ...... +....+ ++.. ..+.-++..+.++|....|..
T Consensus 85 ~s~~~~LK~K~tw~w~~~Yg~wLv~~V~p~t~~~~~~~~~~s~~ni~~~~~~~~~~~~~~~~~I~fv~g~~~G~~~ig~~ 164 (267)
T PF07672_consen 85 PSYKSILKEKETWKWILIYGIWLVVVVFPFTPSWFNILIWISPANIKSVVSGGGFNWIIPIFQILFVAGYFLGPFTIGLW 164 (267)
T ss_pred chHHHHHccchHHHHHHHHHHHheeEEEeccchhHhHhhhcCcccccccccccccchhhHHHHHHHHHHHhhhceeeccc
Confidence 46778888888887666554433221110 011111 111111 1111 114445555556777777777
Q ss_pred hhhhhhhccCchhHHHHHHHHHHHHHHHHHH---hcc---hhHHHHHHHHHHHHhhhhhhhHHHHHHHh--hCCCchhhH
Q 017795 193 SEAIVRKFAYPRPVAMAVAQVVMAFALLYYA---IGW---PGEIYVTTVLVGLSYGAHWAIVPAAASEL--FGLKSFGAL 264 (366)
Q Consensus 193 sD~~grr~~~~R~~~~~~~~~~~~~~~~l~~---~~~---~~~l~~~~~l~G~~~g~~~~~~~~~~se~--f~~~~~g~~ 264 (366)
+-..-+|+.+- ...+..+.++..+..++.. ..+ ...+++..++.|++.=+..++.--...|. ..+++.|..
T Consensus 165 nkt~~kRk~fi-~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~ViL~lPhEyK~~~pk~ig~~ 243 (267)
T PF07672_consen 165 NKTNYKRKPFI-HFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQGVILNLPHEYKGYNPKKIGIQ 243 (267)
T ss_pred hhhhhhhhhHH-HHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhHHHhcChhhhcCCCcceehhH
Confidence 65544433220 0011122333333333311 112 23467777788877644444444444554 345555555
Q ss_pred HHHH
Q 017795 265 YNFL 268 (366)
Q Consensus 265 ~g~~ 268 (366)
+|+.
T Consensus 244 Fg~i 247 (267)
T PF07672_consen 244 FGLI 247 (267)
T ss_pred HHHH
Confidence 5543
No 257
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=94.86 E-value=0.95 Score=44.83 Aligned_cols=149 Identities=10% Similarity=0.116 Sum_probs=91.7
Q ss_pred hCCChhHHHHHHHHHH---HhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH-hcchhHHHHHHHHHHHHh
Q 017795 166 LGYADTSIYVSMISIW---NFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IGWPGEIYVTTVLVGLSY 241 (366)
Q Consensus 166 ~g~~~~~~~~sl~~i~---~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~G~~~ 241 (366)
.|++..+..--++.++ ....-+....++|.++-|+.+ .+..+...+...++. ..+...+-+.-++.|++.
T Consensus 35 kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpvi------il~~~~~i~t~~lll~~~sv~~mq~~q~~yg~~~ 108 (412)
T PF01770_consen 35 KNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVI------ILQALSYIITWLLLLFGTSVLAMQLMQFFYGLAT 108 (412)
T ss_pred cCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHH------HHHHHHHHHHHHHHHHHCcHHHHHHHHHHHHHHH
Confidence 6787766522222222 233455678899999877544 333333233333333 344455666777788777
Q ss_pred hhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhhhhhhhhhhhccCCCCCcccCCCCCCcccC
Q 017795 242 GAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLG 321 (366)
Q Consensus 242 g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g 321 (366)
++ -...++++=...+++++..+.+....+.-+|..+ |..++-.+....+
T Consensus 109 a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~-s~~lgQllvs~~~----------------------------- 157 (412)
T PF01770_consen 109 AA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFI-SSLLGQLLVSFGG----------------------------- 157 (412)
T ss_pred HH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhcC-----------------------------
Confidence 66 3555666666678888999988888887777775 6555444444332
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHhhcHH
Q 017795 322 SICYSITCGIMAGLCIIAMVMSLIVVHRTKS 352 (366)
Q Consensus 322 ~~~~~~~f~i~~~~~~~~~~~~~~~~~~~r~ 352 (366)
.+|...+++..+...++++.++++....|.
T Consensus 158 -~sy~~L~~isl~~~~~a~~~~~fLP~~~~S 187 (412)
T PF01770_consen 158 -VSYFQLNYISLASVSLALLIALFLPMPKRS 187 (412)
T ss_pred -CCHHHHHHHHHHHHHHHHHHHHHcCCCCcc
Confidence 148888888887777777777776554443
No 258
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=94.77 E-value=0.15 Score=51.54 Aligned_cols=83 Identities=10% Similarity=0.253 Sum_probs=63.3
Q ss_pred HHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhhhhhhhhhhhccCCCCCcccCCCCC
Q 017795 237 VGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQET 316 (366)
Q Consensus 237 ~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (366)
+|.+.-.......+.-++..++++.++..+++.....++..+ +|++...++...|
T Consensus 398 ~g~~~P~~~~~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~-~~~~~t~~~~~~g------------------------ 452 (488)
T KOG2325|consen 398 FGIAFPFISTALDTLYSKILGPRDQGTMQGVFSISGSIARVV-GPIFSTAIFTLSG------------------------ 452 (488)
T ss_pred eccccccccchHHHHHHHHhCCccccceeEEEEeccchhhhh-hHHHHhhhHHhcC------------------------
Confidence 444444334455667899999999999999999999999996 9999999998887
Q ss_pred CcccCCcchHHHHHHHHHHHHHHHHHHHHHHhhcHH
Q 017795 317 PTCLGSICYSITCGIMAGLCIIAMVMSLIVVHRTKS 352 (366)
Q Consensus 317 ~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~~r~ 352 (366)
+++.+.+.++..++...+..++.+|.++
T Consensus 453 --------~~~v~~~~~~~~l~~~~l~~~~~~r~~~ 480 (488)
T KOG2325|consen 453 --------PRPVWIILLCLLLVVAALWIVFLKRLVP 480 (488)
T ss_pred --------ccHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 8888777776666666666666555443
No 259
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=94.71 E-value=0.84 Score=45.64 Aligned_cols=116 Identities=16% Similarity=0.167 Sum_probs=69.5
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHH---HHh--------cchhHHHHHHHHHHHHhh
Q 017795 174 YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLY---YAI--------GWPGEIYVTTVLVGLSYG 242 (366)
Q Consensus 174 ~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l---~~~--------~~~~~l~~~~~l~G~~~g 242 (366)
+.+...+.+.++.+++..+-.++.++..+ |..+.... ++.++..+. +.. .+....+.-.++..+..+
T Consensus 256 f~~~~~~vg~~~~l~g~~~y~~~~~~~~~-R~~~~~t~-~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~~~ 333 (433)
T PF03092_consen 256 FYGTLSIVGSIASLLGILLYRKYFSNWSW-RRIFVVTT-LVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVIGM 333 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCH-HHHHHHHH-HHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHHHH
Confidence 44444455556666666666667666655 44433333 222222221 100 111112223445555555
Q ss_pred hhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhh
Q 017795 243 AHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYA 292 (366)
Q Consensus 243 ~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~ 292 (366)
..+-.....++++-|+..=|+.|+++....++|..+ +..++..+.+..+
T Consensus 334 i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~-s~~lg~~l~~~~~ 382 (433)
T PF03092_consen 334 IAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSV-SSTLGAFLMELFG 382 (433)
T ss_pred HHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHH-HHHHHHHHHHHcC
Confidence 555555568899999999999999999999999995 8888888777665
No 260
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=93.98 E-value=0.54 Score=48.75 Aligned_cols=150 Identities=17% Similarity=0.256 Sum_probs=97.7
Q ss_pred hcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhh-hhhccCchhHHHHHHHHHHHHHHHHHH-----h---c
Q 017795 157 DNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAI-VRKFAYPRPVAMAVAQVVMAFALLYYA-----I---G 225 (366)
Q Consensus 157 ~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~-grr~~~~R~~~~~~~~~~~~~~~~l~~-----~---~ 225 (366)
+.+.++...++.....+ .+..++-..+...+++++++|.+ ||-+.+ .++.++..+|..++. . .
T Consensus 59 nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI------~~~s~i~~~G~~~lt~~a~~~~l~p 132 (571)
T KOG1237|consen 59 NLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTI------NIGSLISLLGLFGLTLSAMIPALLP 132 (571)
T ss_pred HHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHH------HHHHHHHHHHHHHHHHHHHhhhcCC
Confidence 44445566777766544 77777777788889999999997 554333 444444444433221 0 0
Q ss_pred -------c------h-----hHHHHHHHHHHHHhhhhhhhHHHHHHHhhC---CC---chhhHHHHHHhHhhhhHHHhhh
Q 017795 226 -------W------P-----GEIYVTTVLVGLSYGAHWAIVPAAASELFG---LK---SFGALYNFLTLASPAGSLIFSG 281 (366)
Q Consensus 226 -------~------~-----~~l~~~~~l~G~~~g~~~~~~~~~~se~f~---~~---~~g~~~g~~~~~~~~G~~i~gp 281 (366)
. + ..++.+..+..+|.|+.-+...+.-+|-|+ ++ ....-++......++|..+ +.
T Consensus 133 ~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~-a~ 211 (571)
T KOG1237|consen 133 FMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALL-AQ 211 (571)
T ss_pred ccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHH-HH
Confidence 0 0 145566667777888888888888888887 22 2447788888888888886 65
Q ss_pred hHHHHHhhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHH
Q 017795 282 VIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLI 345 (366)
Q Consensus 282 ~i~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~ 345 (366)
.+.-++-|..+ |.+.|.+..++.+++.++.+.
T Consensus 212 t~~vyiq~~~~--------------------------------w~lgf~i~~~~~~lai~iF~~ 243 (571)
T KOG1237|consen 212 TVLVYIQDNVG--------------------------------WKLGFGIPTVLNALAILIFLP 243 (571)
T ss_pred HHHHhhhhccc--------------------------------ceeeccHHHHHHHHHHHHHHc
Confidence 55555444443 999999988877776655443
No 261
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=93.31 E-value=0.69 Score=45.28 Aligned_cols=136 Identities=18% Similarity=0.255 Sum_probs=77.6
Q ss_pred HHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHHHHHHHHHHHhhhhhhhhhhhh-----hhhhhccCchhHHHHHHHH
Q 017795 139 LLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSIYVSMISIWNFLGRVGGGYFSE-----AIVRKFAYPRPVAMAVAQV 213 (366)
Q Consensus 139 ~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~~~~~~~~sl~~i~~~~g~~~~G~lsD-----~~grr~~~~R~~~~~~~~~ 213 (366)
.++.+.+.. .+.-++....+|.+.+.-|.+-+.....-+.-+.+.-.++|.++.| |+|||+.+- .-++.
T Consensus 34 llLl~LYll-QGiP~GL~~~iP~lL~ak~vSyt~~a~fS~ay~P~sLKllWaPiVDs~y~k~~GrrksWv-----vp~q~ 107 (510)
T KOG3574|consen 34 LLLLFLYLL-QGIPLGLIGAIPLLLQAKGVSYTSQAIFSFAYWPFSLKLLWAPIVDSVYSKRFGRRKSWV-----VPCQY 107 (510)
T ss_pred HHHHHHHHH-cCCchhHhhhhHHHhcCCCcchhhhhhhhhhhhHHHHHHHHHhhhHHHHHHhhcccccee-----eehHH
Confidence 333333333 3444455568999998776654433222333467777889999999 888876552 33444
Q ss_pred HHHHHHHHHHh------c-c---hhH--HHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhh
Q 017795 214 VMAFALLYYAI------G-W---PGE--IYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSG 281 (366)
Q Consensus 214 ~~~~~~~l~~~------~-~---~~~--l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp 281 (366)
+.+..+++++. + + +.. +-+..++.-+..+.+-..+=++.-.+..+++.|-+......+...|-++ |.
T Consensus 108 llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL-~~ 186 (510)
T KOG3574|consen 108 LLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFL-GN 186 (510)
T ss_pred HHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHh-hc
Confidence 43433333331 1 1 121 1123344455555555555566667777788777777767777777775 53
No 262
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=93.04 E-value=0.24 Score=49.37 Aligned_cols=125 Identities=14% Similarity=0.096 Sum_probs=75.2
Q ss_pred HHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHh-c------
Q 017795 155 VIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAI-G------ 225 (366)
Q Consensus 155 ~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~-~------ 225 (366)
=...++++.+++|.+..-. ..-.-.+.+++.+|+.|..|||.-.|+.-+||.+.+. .....++.+++.. .
T Consensus 51 elsy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~-s~~i~~~l~Lig~aaDig~~l 129 (498)
T KOG0637|consen 51 ELSYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAG-SLLIAVSLFLIGYAADIGLLL 129 (498)
T ss_pred HhccccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHh-hHHHHHHHhhhhhHhhhhHHh
Confidence 3456788999999875432 3333345567788999999998766555555544443 3333444444321 1
Q ss_pred --ch----hHHHHHHHHHHHH-----hhhhhhhHHHHHHHhhCCCchhh-HHHHHHhHhhhhHHHhhh
Q 017795 226 --WP----GEIYVTTVLVGLS-----YGAHWAIVPAAASELFGLKSFGA-LYNFLTLASPAGSLIFSG 281 (366)
Q Consensus 226 --~~----~~l~~~~~l~G~~-----~g~~~~~~~~~~se~f~~~~~g~-~~g~~~~~~~~G~~i~gp 281 (366)
+. ...-+..++.|+. .-......-+...|+...++..+ +++.......+|+.+ |-
T Consensus 130 gd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvL-GY 196 (498)
T KOG0637|consen 130 GDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVL-GY 196 (498)
T ss_pred cCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhccee-ee
Confidence 11 1122333333433 22334445568899988777666 888888888888885 53
No 263
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=92.48 E-value=0.37 Score=48.44 Aligned_cols=102 Identities=11% Similarity=0.081 Sum_probs=78.8
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHhhhhhhhHHHHHH
Q 017795 174 YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAIGWPGEIYVTTVLVGLSYGAHWAIVPAAAS 253 (366)
Q Consensus 174 ~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~l~G~~~g~~~~~~~~~~s 253 (366)
..++......+..++++.+.|+++.|+.+ .++......-.+.+...|.+.+|+...+.|+|.+..|.-...+.+
T Consensus 55 ~~aiiY~~ftv~~l~~psiv~~i~~K~~l------v~ga~~y~~f~~gfl~~N~y~~yfssallG~Gaallw~GqG~ylt 128 (461)
T KOG3098|consen 55 GQAIIYAFFTVSCLFAPSIVNFLGPKWAL------VIGATCYAAFPLGFLFPNSYYLYFSSALLGFGAALLWTGQGGYLT 128 (461)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHhhHHHHH------HHHhHHHHHHHHHHHhcchHHHHHHHHHhhhhHHheecccceehh
Confidence 46677777888899999999999887554 555544444444444567788999999999999998999999999
Q ss_pred HhhCCCchhhHHHHHHhHhhhhHHHhhhh
Q 017795 254 ELFGLKSFGALYNFLTLASPAGSLIFSGV 282 (366)
Q Consensus 254 e~f~~~~~g~~~g~~~~~~~~G~~i~gp~ 282 (366)
+....+...+..++.......+.++ |..
T Consensus 129 ~~st~~tie~Nisi~Wai~~~~li~-Ggi 156 (461)
T KOG3098|consen 129 SNSTRETIERNISIFWAIGQSSLII-GGI 156 (461)
T ss_pred hcCChhhHHHHHHHHHHHHHHHHHh-hhH
Confidence 9999888888888877777666664 543
No 264
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=90.70 E-value=3.8 Score=41.00 Aligned_cols=156 Identities=17% Similarity=0.141 Sum_probs=88.3
Q ss_pred CHHHHhhhhHHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchh
Q 017795 128 TLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRP 205 (366)
Q Consensus 128 ~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~ 205 (366)
.|+..++++.|+ -.+++.+.+...+.+...+-.++.+.|+++..+ +=++-.+.+..|.+...++-+|+|-.+.-
T Consensus 251 ~w~~Y~~q~vfl-as~alalLY~TVLsf~~lmt~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G--- 326 (432)
T PF06963_consen 251 GWRTYFRQPVFL-ASFALALLYFTVLSFGGLMTAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAG--- 326 (432)
T ss_pred cHHHHHhCHHHH-HHHHHHHHHHHHhcCcHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhH---
Confidence 466666776544 334444444444555566667888889998865 66666777788888888888888754322
Q ss_pred HHHHHHHH-HHHHHHHHHH-hcch-hHHHHHHHHHHHH--hhhhhhhHH---HHHHHhhCCCchhhHHHHHHhHhhhhHH
Q 017795 206 VAMAVAQV-VMAFALLYYA-IGWP-GEIYVTTVLVGLS--YGAHWAIVP---AAASELFGLKSFGALYNFLTLASPAGSL 277 (366)
Q Consensus 206 ~~~~~~~~-~~~~~~~l~~-~~~~-~~l~~~~~l~G~~--~g~~~~~~~---~~~se~f~~~~~g~~~g~~~~~~~~G~~ 277 (366)
.+....+. ...++...+. ..++ .......++.|+. --+.|+.-. -++-|..+.++||+..|.-+...++-..
T Consensus 327 ~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~l 406 (432)
T PF06963_consen 327 LWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFEL 406 (432)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHH
Confidence 12222222 2222222222 2322 2222233333322 223343332 2556778888999999998888887777
Q ss_pred HhhhhHHHHHhh
Q 017795 278 IFSGVIASGIYD 289 (366)
Q Consensus 278 i~gp~i~G~l~d 289 (366)
+ -.+.+.+..
T Consensus 407 l--~~~~~ii~~ 416 (432)
T PF06963_consen 407 L--SFVLTIIFP 416 (432)
T ss_pred H--HHHHHhccC
Confidence 4 344454443
No 265
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=90.50 E-value=1.5 Score=33.44 Aligned_cols=66 Identities=8% Similarity=-0.004 Sum_probs=43.7
Q ss_pred HHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH
Q 017795 152 GLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA 223 (366)
Q Consensus 152 ~~~~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~ 223 (366)
-+.+...+|.+.++.+++.++. ..+.-.++..+|.+...++.++..++. ++..+.++..+..+.++
T Consensus 8 RFayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~------~~~~~l~~~~~~~~~ma 75 (85)
T PF06779_consen 8 RFAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRR------LLRAGLLLTVLSTAAMA 75 (85)
T ss_pred HHHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHH------HHHHHHHHHHHHHHHHH
Confidence 3457778999999999998766 666777777788888877776643322 22445555555444444
No 266
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=90.12 E-value=17 Score=37.03 Aligned_cols=42 Identities=19% Similarity=0.273 Sum_probs=36.0
Q ss_pred hHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhh
Q 017795 247 IVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYD 289 (366)
Q Consensus 247 ~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d 289 (366)
+.|..+.|++..++..+.|+++.+++++|.++ |+.+..++..
T Consensus 164 LFW~fAN~itt~~eAKRfYpl~g~ganigli~-sG~~~~~~~~ 205 (491)
T PF03219_consen 164 LFWGFANEITTVEEAKRFYPLFGLGANIGLIF-SGQLTSYFSS 205 (491)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 46888999999999999999999999999996 7777766665
No 267
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=89.74 E-value=0.64 Score=43.46 Aligned_cols=92 Identities=14% Similarity=0.119 Sum_probs=53.8
Q ss_pred HHHhCCChhHH-HHHHHHH-HHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHH
Q 017795 163 CQSLGYADTSI-YVSMISI-WNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAIGWPGEIYVTTVLVGLS 240 (366)
Q Consensus 163 ~~~~g~~~~~~-~~sl~~i-~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~l~G~~ 240 (366)
.+.+|+...++ ..-+.++ ..++.+.+.|.+.|+.|||+.. ....+..++.++. =-.+....+++++++-|+.
T Consensus 64 YstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKrac---vtycitYiLsCiT---KhSpqYkVLmVGR~LGGia 137 (454)
T KOG4332|consen 64 YSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRAC---VTYCITYILSCIT---KHSPQYKVLMVGRVLGGIA 137 (454)
T ss_pred ehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccce---eeehHHHHHHHHh---hcCCceEEEeehhhhhhHH
Confidence 45667766554 2222222 2345566778899999998754 2223333333332 1123344678999999998
Q ss_pred hhhhhhhHHH-HHHHhhCCCc
Q 017795 241 YGAHWAIVPA-AASELFGLKS 260 (366)
Q Consensus 241 ~g~~~~~~~~-~~se~f~~~~ 260 (366)
....++..-+ +++|.-..+.
T Consensus 138 TsLLFSaFEsWliaEHnekr~ 158 (454)
T KOG4332|consen 138 TSLLFSAFESWLIAEHNEKRG 158 (454)
T ss_pred HHHHHHHHHHHHHHHhhhccC
Confidence 8777776655 5667654443
No 268
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=89.07 E-value=0.14 Score=48.74 Aligned_cols=99 Identities=11% Similarity=0.126 Sum_probs=2.8
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhh-hhccCchhHHH-HHHHHHHHHHHHHHH-----------hcchhHHHHHHHHHHHH
Q 017795 174 YVSMISIWNFLGRVGGGYFSEAIV-RKFAYPRPVAM-AVAQVVMAFALLYYA-----------IGWPGEIYVTTVLVGLS 240 (366)
Q Consensus 174 ~~sl~~i~~~~g~~~~G~lsD~~g-rr~~~~R~~~~-~~~~~~~~~~~~l~~-----------~~~~~~l~~~~~l~G~~ 240 (366)
...+++++..+||.+.++.- +. ++ +|.++. .+.=+++...++++. ..+....++..+++|+.
T Consensus 187 ~fl~Fn~gD~iGR~l~~~~~--~~~~~---~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~T 261 (309)
T PF01733_consen 187 LFLLFNLGDFIGRFLASWPR--WPGPS---PRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFT 261 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcchhcceeE--ecccc---cccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHc
Confidence 56678999999999888742 22 11 111111 111122222222221 22334445667788888
Q ss_pred hhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHH
Q 017795 241 YGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSL 277 (366)
Q Consensus 241 ~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~ 277 (366)
.|-..++.....++...++++..+-.++...-.+|-.
T Consensus 262 NGyl~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~ 298 (309)
T PF01733_consen 262 NGYLSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLF 298 (309)
T ss_dssp -----HHHH----------------------------
T ss_pred cchhhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHH
Confidence 7776677777777877777777766666666555555
No 269
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=89.00 E-value=29 Score=35.44 Aligned_cols=99 Identities=16% Similarity=0.188 Sum_probs=57.5
Q ss_pred HhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhhhhhhhhhhhccCCCCCcc-cCCCCCCc
Q 017795 240 SYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVS-FRDQETPT 318 (366)
Q Consensus 240 ~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 318 (366)
..-.++....+.-+.+..+..=|+.+-++|+.+++|+- .-..+.=++.|....+.=. ........ ....+...
T Consensus 418 ~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGt-WP~~~vL~lVD~fT~~~C~-----~~~t~~~~c~~~~~k~~ 491 (544)
T PF13000_consen 418 MSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGT-WPRTFVLWLVDYFTVATCT-----VPGTNSFSCSSDAEKEQ 491 (544)
T ss_pred HHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCC-chHHHHHHHhhhccccccC-----CCCCCCceeccHHHHHH
Confidence 33444555555667778888999999999999999998 4455666777765421100 00000000 01112234
Q ss_pred c---cCCcch--HHHHHHHHHHHHHHHHHHH
Q 017795 319 C---LGSICY--SITCGIMAGLCIIAMVMSL 344 (366)
Q Consensus 319 c---~g~~~~--~~~f~i~~~~~~~~~~~~~ 344 (366)
| .|-.|- |=.+++..++|++..++.+
T Consensus 492 Ct~~~GG~C~i~rDGYYi~~~lCvviGi~~~ 522 (544)
T PF13000_consen 492 CTKAGGGTCVIIRDGYYITNILCVVIGIVLW 522 (544)
T ss_pred HhhCCCCeEEEEeccchhhhHHHHHHHHHHH
Confidence 6 355564 6677887777776555443
No 270
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=88.83 E-value=0.47 Score=48.28 Aligned_cols=48 Identities=13% Similarity=0.252 Sum_probs=39.8
Q ss_pred HHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccC
Q 017795 155 VIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAY 202 (366)
Q Consensus 155 ~~~~l~~i~~~~g~~~~~~--~~sl~~i~~~~g~~~~G~lsD~~grr~~~ 202 (366)
+...++.+.+.+|+++... ++.+--+..+++.|++|+++||+-+|+..
T Consensus 30 l~pll~vy~kQLGl~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~r~~r~l 79 (618)
T KOG3762|consen 30 LFPLLAVYFKQLGLNPAVVGTLTGTLPLVEFLAAPLWGFLADRYRKRRPL 79 (618)
T ss_pred cchHHHHHHHHcCCCHHHhhhhhhHHHHHHHHhHHHHHHHHHHHHhcCch
Confidence 3456778889999998876 77777888999999999999999876554
No 271
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=88.14 E-value=25 Score=34.78 Aligned_cols=127 Identities=11% Similarity=0.026 Sum_probs=55.4
Q ss_pred HHHHHHHHHHHhhhhHHHHHhcHHHHHHHh-CCChhHHHHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHH
Q 017795 137 DFLLLFFSLVLASGSGLTVIDNLGQICQSL-GYADTSIYVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVM 215 (366)
Q Consensus 137 ~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~-g~~~~~~~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~ 215 (366)
.++..++...-.....-.+++.-+++.+.+ +.+.+..+.+.+.+.+.+..++.-.+=-+...|... |-........+.
T Consensus 19 v~~i~~llGiG~LlpWN~fiTa~~y~~~~~~~~~~~~~F~~~~~~~a~i~~ll~~~~n~~~~~~~~~-~~~~~l~~~~il 97 (406)
T KOG1479|consen 19 VYLIFLLLGIGTLLPWNMFITASDYYYYRFPGYHNSKNFTSSYTLAAQIPLLLFNLLNAFLNTRLRT-RVGYLLSLIAIL 97 (406)
T ss_pred HHHHHHHHhcccccchHhhhccHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 344433333333344556666677777665 344433355555555555555544444444333111 111111111111
Q ss_pred HHHHHHHHh--cc--h----hHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHH
Q 017795 216 AFALLYYAI--GW--P----GEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALY 265 (366)
Q Consensus 216 ~~~~~l~~~--~~--~----~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~ 265 (366)
.+..+.++. .. . ...++..++.+++.|.....+++..++ +|.+.-...+
T Consensus 98 ~i~~l~~~~v~~~~~~~~ff~vt~~~vv~~~~a~a~~qgs~~G~a~~-~P~~ytqavm 154 (406)
T KOG1479|consen 98 FIVTLDLALVKTDTWTNGFFLVTLIIVVLLNLANAVVQGSLYGLAGL-FPSEYTQAVM 154 (406)
T ss_pred HHHHHHHHhhccCCccchhHHHHHHHHHHHhhhhhhhccchhhhhhc-CCHHHHHHHH
Confidence 111111221 11 1 123445556666666666666665544 6666543333
No 272
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=86.76 E-value=13 Score=36.15 Aligned_cols=91 Identities=19% Similarity=0.212 Sum_probs=58.7
Q ss_pred HHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH-hcchhHHHHHHHHHHHHhhhhhhhHHHHHHHh
Q 017795 177 MISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASEL 255 (366)
Q Consensus 177 l~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~ 255 (366)
+..+.++++.+..|++.-.+.|. +...+.++.+..+...+++. ..+.+..|++-+++...+....++....++..
T Consensus 279 v~tlLGa~~~~~~g~l~i~w~r~----g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~n 354 (433)
T KOG3810|consen 279 VSTLLGAIAALAAGYLNINWNRW----GDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIARN 354 (433)
T ss_pred HHHHHHHHHHHHHHheeeccchh----hHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHHHh
Confidence 33445566677778875554442 23344555444443334444 44556778888888888877777777778888
Q ss_pred hCCCchhhHHHHHHhH
Q 017795 256 FGLKSFGALYNFLTLA 271 (366)
Q Consensus 256 f~~~~~g~~~g~~~~~ 271 (366)
...+.+|..+|+-...
T Consensus 355 L~~e~~gLvFGiNTFv 370 (433)
T KOG3810|consen 355 LSSELFGLVFGINTFV 370 (433)
T ss_pred hhhhhheeeeehHHHH
Confidence 8888889888875543
No 273
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=85.27 E-value=16 Score=37.13 Aligned_cols=94 Identities=14% Similarity=0.118 Sum_probs=60.2
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH-hcchhHHHHHHHHHHHHhhhhhhhHHHHH
Q 017795 174 YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAA 252 (366)
Q Consensus 174 ~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~ 252 (366)
.-++..+.+.+..+..|++-.++.+ .. .+.+.+..++.+..++++. ..+.+..|++-++++..+....++...-+
T Consensus 303 veA~~tllga~~a~~ag~~~~~w~~-~~---~l~l~v~s~~~~gll~~m~~t~~Iw~~Y~~yvlf~~~y~flitia~~~i 378 (511)
T TIGR00806 303 VDAASTLLGAITSFIAGFVNIRWAR-WS---KLLIAVVSAIQAGLVFWMSQSHDIWVLYVTYVLFRGIYQFLVPIATFQI 378 (511)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCchh-hH---HHHHHHHHHHHHHHhhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344445556677788887444321 11 1233333333333333333 45667788999999999988888888888
Q ss_pred HHhhCCCchhhHHHHHHhH
Q 017795 253 SELFGLKSFGALYNFLTLA 271 (366)
Q Consensus 253 se~f~~~~~g~~~g~~~~~ 271 (366)
+.....+.+|..+|+-+..
T Consensus 379 A~~L~~~~~aLvFGiNtfv 397 (511)
T TIGR00806 379 ASSLSKELCALVFGINTFV 397 (511)
T ss_pred HHHhcccceEEEEecHHHH
Confidence 8888888899999886654
No 274
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=82.36 E-value=51 Score=32.09 Aligned_cols=66 Identities=12% Similarity=0.179 Sum_probs=35.7
Q ss_pred hhhHHHHHHHHHHHhhhhHHHHHh----cHHHHHHHhCCChhHH--HHHHHH-HHHhhhhhhhhhhhhhhhhh
Q 017795 134 MKADFLLLFFSLVLASGSGLTVID----NLGQICQSLGYADTSI--YVSMIS-IWNFLGRVGGGYFSEAIVRK 199 (366)
Q Consensus 134 ~~~~~~ll~~~~~~~~~~~~~~~~----~l~~i~~~~g~~~~~~--~~sl~~-i~~~~g~~~~G~lsD~~grr 199 (366)
+.++++.+++.-+++..+...... |+-.=-...|++.... ..+... ++|.+..++.|.+++...+.
T Consensus 117 ~~~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~ 189 (354)
T PF05631_consen 117 HSSNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADW 189 (354)
T ss_pred hccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHH
Confidence 345677887776666554433322 3332223457765533 333333 55666667777777665443
No 275
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=82.24 E-value=53 Score=32.18 Aligned_cols=116 Identities=20% Similarity=0.232 Sum_probs=55.9
Q ss_pred HHHHHHHHHhhhhHHHHHhcHHHHHHHh-CCCh--hHHHHHHHHHHHhhhhhhhhhhhhhh-hhhccCchhHHHHHHHHH
Q 017795 139 LLLFFSLVLASGSGLTVIDNLGQICQSL-GYAD--TSIYVSMISIWNFLGRVGGGYFSEAI-VRKFAYPRPVAMAVAQVV 214 (366)
Q Consensus 139 ~ll~~~~~~~~~~~~~~~~~l~~i~~~~-g~~~--~~~~~sl~~i~~~~g~~~~G~lsD~~-grr~~~~R~~~~~~~~~~ 214 (366)
|++.++.+....++..+-..+..+...+ |-.. .+..++.+.....+|..+.-++.|.- -.|....-...-.++-+-
T Consensus 10 alL~laVf~~aa~GlvyElal~tLatyLlG~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~S 89 (508)
T COG4262 10 ALLLLAVFVCAACGLVYELALGTLATYLLGGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVS 89 (508)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccch
Confidence 4455555555566666666666666664 3222 12244444444445555444433321 111110000011111111
Q ss_pred HHHHHHHHHhc---chhHHHHHHHHHHHHhhhhhhhHHHHHHH
Q 017795 215 MAFALLYYAIG---WPGEIYVTTVLVGLSYGAHWAIVPAAASE 254 (366)
Q Consensus 215 ~~~~~~l~~~~---~~~~l~~~~~l~G~~~g~~~~~~~~~~se 254 (366)
.++.++.++.. ....++...+++|.-.|+-.++...+...
T Consensus 90 a~~ly~~FA~~~~~~~~Vly~lt~vIG~LVG~EiPL~mrml~~ 132 (508)
T COG4262 90 AAALYLLFALESAPSRLVLYALTAVIGVLVGAEIPLLMRMLQR 132 (508)
T ss_pred HHHHHHHHHhccchHHHHHHHHHHHHHHHHhcchHHHHHHHHH
Confidence 12222234422 23467788888998888888887776655
No 276
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=81.00 E-value=5 Score=34.07 Aligned_cols=33 Identities=15% Similarity=0.161 Sum_probs=26.3
Q ss_pred hhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHH
Q 017795 245 WAIVPAAASELFGLKSFGALYNFLTLASPAGSL 277 (366)
Q Consensus 245 ~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~ 277 (366)
..+.|.++|.-+.++.-|..+|+-..-.+++-+
T Consensus 112 lGisYGilSaSWD~~r~GSllG~~e~~~N~~r~ 144 (153)
T PF11947_consen 112 LGISYGILSASWDPEREGSLLGWEEFKRNWGRM 144 (153)
T ss_pred HhhhhhhcccccCCCCCCCcccHHHHHHhHHHH
Confidence 466778888889899899999988877776655
No 277
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=71.69 E-value=69 Score=32.12 Aligned_cols=43 Identities=7% Similarity=0.016 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHH
Q 017795 230 IYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSL 277 (366)
Q Consensus 230 l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~ 277 (366)
.++..++.|++.+...+...++++ .||++. .+.+..+.++++.
T Consensus 109 ~~~~v~~~g~~~~~~q~s~~gla~-~fp~~~----~~a~~~G~g~aGv 151 (437)
T TIGR00939 109 TMASVVIINSGMALLQGSLFGLAG-VFPSTY----SSAVMSGQGLAGV 151 (437)
T ss_pred HHHHHHHHHhhhhhhcccchhhcc-cCCHHH----HHHHHhcchhHHH
Confidence 344555667776666655565544 576543 3333334444444
No 278
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=70.57 E-value=46 Score=33.00 Aligned_cols=70 Identities=16% Similarity=0.134 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHHHh-cchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHH
Q 017795 209 AVAQVVMAFALLYYAI-GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIA 284 (366)
Q Consensus 209 ~~~~~~~~~~~~l~~~-~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~ 284 (366)
.+..+++++++++.+. .+...-+++.++.+++.|..=...-++ +..|+... .+-...+.+.++++ |+...
T Consensus 93 ~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~l-t~~y~~~~----l~~wssGTG~aGl~-Ga~~y 163 (402)
T PF02487_consen 93 LICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSL-THFYGKSS----LSAWSSGTGGAGLV-GALYY 163 (402)
T ss_pred HHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHH-HHhcCccc----cccccCCcChhhHH-HHHHH
Confidence 4445566667666664 444555677777777776644444444 44676532 33333444444443 44333
No 279
>PRK10263 DNA translocase FtsK; Provisional
Probab=67.67 E-value=65 Score=36.72 Aligned_cols=18 Identities=11% Similarity=0.379 Sum_probs=10.2
Q ss_pred hhHHHhhhhHHHHHhhhhh
Q 017795 274 AGSLIFSGVIASGIYDYYA 292 (366)
Q Consensus 274 ~G~~i~gp~i~G~l~d~~~ 292 (366)
.|+++ |-.+...+....|
T Consensus 142 gGGII-G~lLs~lL~~LfG 159 (1355)
T PRK10263 142 SGGVI-GSLLSTTLQPLLH 159 (1355)
T ss_pred ccchH-HHHHHHHHHHHHh
Confidence 35554 6666666666555
No 280
>COG1079 Uncharacterized ABC-type transport system, permease component [General function prediction only]
Probab=65.40 E-value=1.3e+02 Score=28.69 Aligned_cols=94 Identities=20% Similarity=0.106 Sum_probs=52.2
Q ss_pred hhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH--hcchhHHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCc
Q 017795 183 FLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA--IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKS 260 (366)
Q Consensus 183 ~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~--~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~ 260 (366)
.+-.-++|.+|||-|.-+.-. =..+++.+....+.. ..++ +..++.+...|..+++..+..+.....++
T Consensus 21 LllaaLG~l~sERsGVlNIgl-----EG~M~~gAf~~~~~~~~t~sp----w~gl~~a~l~g~l~~ll~a~~ti~l~~nq 91 (304)
T COG1079 21 LLLAALGGLFSERSGVLNIGL-----EGIMLLGAFSGALFAYGTGSP----WLGLLAAALVGALFGLLHAFLTIKLRANQ 91 (304)
T ss_pred HHHHHHHHHHHHHhceeeech-----hhHHHHHHHHHHHHHHccccH----HHHHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 334446688899988754321 111222222211212 2222 33444555556667788888888888888
Q ss_pred hhhHHHHHHhHhhhhHHHhhhhHHHH
Q 017795 261 FGALYNFLTLASPAGSLIFSGVIASG 286 (366)
Q Consensus 261 ~g~~~g~~~~~~~~G~~i~gp~i~G~ 286 (366)
.-+..++...+..+..++ +-.+.|.
T Consensus 92 iisG~alnl~a~Glt~fl-~~~~~~~ 116 (304)
T COG1079 92 IISGLALNLLASGLTAFL-GQSIFGQ 116 (304)
T ss_pred chhHHHHHHHHHHHHHHH-HHHHhcc
Confidence 766666666666666664 4444443
No 281
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=64.42 E-value=91 Score=30.94 Aligned_cols=14 Identities=21% Similarity=0.332 Sum_probs=10.9
Q ss_pred hhhhHHHHHhhhhh
Q 017795 279 FSGVIASGIYDYYA 292 (366)
Q Consensus 279 ~gp~i~G~l~d~~~ 292 (366)
++|.+.|.+....+
T Consensus 190 Lapv~tg~Iitfvs 203 (503)
T KOG2601|consen 190 LAPVITGLIITFVS 203 (503)
T ss_pred hhhhhhcccceeec
Confidence 48888898887665
No 282
>COG3619 Predicted membrane protein [Function unknown]
Probab=58.82 E-value=1.4e+02 Score=27.07 Aligned_cols=41 Identities=17% Similarity=0.101 Sum_probs=18.7
Q ss_pred hcHHHHHHHhCCCh-hHH-HHHHHHHHHhhhhhhhhhhhhhhh
Q 017795 157 DNLGQICQSLGYAD-TSI-YVSMISIWNFLGRVGGGYFSEAIV 197 (366)
Q Consensus 157 ~~l~~i~~~~g~~~-~~~-~~sl~~i~~~~g~~~~G~lsD~~g 197 (366)
.|+-+..-++.-++ ... ...++.+..++|......++.+..
T Consensus 41 GN~v~~gi~l~~~~~~~a~~~~~pii~Fv~Gv~~~~~~~r~~~ 83 (226)
T COG3619 41 GNLVLLGIELAEGDAALAVLLLLPILAFVLGVAAAELISRRAT 83 (226)
T ss_pred ccHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 34555554443222 223 444444555556444444444443
No 283
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=58.12 E-value=74 Score=29.33 Aligned_cols=27 Identities=30% Similarity=0.484 Sum_probs=17.2
Q ss_pred HHHHHHhHhhhhHHHhhhhHHHHHhhhhh
Q 017795 264 LYNFLTLASPAGSLIFSGVIASGIYDYYA 292 (366)
Q Consensus 264 ~~g~~~~~~~~G~~i~gp~i~G~l~d~~~ 292 (366)
-.+....+..+|..+ | ++.|.++|+.+
T Consensus 38 ~l~~l~~~~~~G~~~-G-~~~G~l~d~~g 64 (250)
T PF06813_consen 38 QLNTLSTAGDIGSYF-G-ILAGLLYDRFG 64 (250)
T ss_pred HHHHHHHHHHHHhhc-c-HHHHHHHHhcc
Confidence 345566666777763 4 56677777665
No 284
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=56.79 E-value=32 Score=35.11 Aligned_cols=142 Identities=14% Similarity=0.075 Sum_probs=68.5
Q ss_pred HHHHHHHHhhhhHHHHH-hcHHHHHHH--hCCChhHH-HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHH
Q 017795 140 LLFFSLVLASGSGLTVI-DNLGQICQS--LGYADTSI-YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVM 215 (366)
Q Consensus 140 ll~~~~~~~~~~~~~~~-~~l~~i~~~--~g~~~~~~-~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~ 215 (366)
++.+.++..... .+.. ...|.++++ .+.+-++. ..|+ ..+.+--.++|.++.|-+--|+.-+|+-++...+.+.
T Consensus 4 lL~~LY~lQGiP-~GL~~gsiPflL~~~~~~~sy~q~~~fSl-a~~PfSlKlLWaPiVDs~y~~~~GRRKSWiiP~Q~l~ 81 (544)
T PF13000_consen 4 LLVLLYFLQGIP-LGLAFGSIPFLLQSMAKKVSYSQQAIFSL-ASYPFSLKLLWAPIVDSVYSKRIGRRKSWIIPIQYLS 81 (544)
T ss_pred HHHHHHHHcCcc-cccccccchhhhccccCCCChhHheeeee-eechhHHHHhhhhhhhhhcccccCCcchhhhHHHHHH
Confidence 344444443332 2333 568888887 44443332 1111 1233445667777777542222223444556667776
Q ss_pred HHHHHHHHhcc--------------------hh-----HHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHh
Q 017795 216 AFALLYYAIGW--------------------PG-----EIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTL 270 (366)
Q Consensus 216 ~~~~~l~~~~~--------------------~~-----~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~ 270 (366)
++.++.++... .. .+.+..++.-+-++.+--.+=.++-.+..+++.+-+......
T Consensus 82 g~~m~~l~~~i~~~~~~~~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWALT~Ls~~n~~~ASTcqtv 161 (544)
T PF13000_consen 82 GILMLYLSYNISQWLLFDGVDDALLGQGESTVNNITIKFLTWFFFILVFLCATQDIAVDGWALTMLSPENVGYASTCQTV 161 (544)
T ss_pred HHHHHHHHhccchhhcccccchhhhcCCCCcccccchhHHHHHHHHHHHHHccCCceeehhhhhhcChhhcchHHHHHHh
Confidence 66655544211 00 011122122222333333333455566677777777666666
Q ss_pred HhhhhHHHhhhhHH
Q 017795 271 ASPAGSLIFSGVIA 284 (366)
Q Consensus 271 ~~~~G~~i~gp~i~ 284 (366)
+.+.|-++ |-.++
T Consensus 162 G~~~Gyfl-s~tvF 174 (544)
T PF13000_consen 162 GQTAGYFL-SFTVF 174 (544)
T ss_pred HhhhhHHH-HHHHH
Confidence 66777664 54333
No 285
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=53.72 E-value=2e+02 Score=27.33 Aligned_cols=43 Identities=16% Similarity=0.293 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCchhhHHHHHHhH
Q 017795 229 EIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLA 271 (366)
Q Consensus 229 ~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~ 271 (366)
.-+++..++-.|.|..|+.+.-+=++..|.+.+++.+|++-.-
T Consensus 346 ~s~i~F~~~E~cvGlfwPSimkmRsqyIPEearstimNfFRvP 388 (454)
T KOG4332|consen 346 ESLIGFCLFEACVGLFWPSIMKMRSQYIPEEARSTIMNFFRVP 388 (454)
T ss_pred HHHHHHHHHHHHHhhcchHHHHHHHhhCCHHHHhhhhhheech
Confidence 3456666777888999998888889999999999999987554
No 286
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=53.68 E-value=1.3e+02 Score=29.12 Aligned_cols=22 Identities=5% Similarity=0.235 Sum_probs=13.2
Q ss_pred HHHHhhhhHHHHHHHHHHHhhh
Q 017795 129 LPQALMKADFLLLFFSLVLASG 150 (366)
Q Consensus 129 ~~~~l~~~~~~ll~~~~~~~~~ 150 (366)
+++.+++|..+..+++..++..
T Consensus 238 ~~~~~~nP~~~a~~lgli~~~~ 259 (385)
T PF03547_consen 238 ILKLFKNPPLIAIILGLIIGLI 259 (385)
T ss_pred HHHHHhCcHHHHHHHHHHHHHH
Confidence 3456677777766666555443
No 287
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=52.66 E-value=32 Score=34.12 Aligned_cols=97 Identities=13% Similarity=0.132 Sum_probs=53.4
Q ss_pred HHHH-HHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH-------hcchhHHHHHHHHHHHHhhhhh
Q 017795 174 YVSM-ISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-------IGWPGEIYVTTVLVGLSYGAHW 245 (366)
Q Consensus 174 ~~sl-~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~-------~~~~~~l~~~~~l~G~~~g~~~ 245 (366)
.+.+ ++++..+|++.+.++-+.- ||+.. +..+.-.+....+.++- ..+.+...+...++|+..|=..
T Consensus 287 ~~~l~fN~~d~vG~~~a~~~~~~~-~r~l~----i~v~lR~lfiPlF~~cn~~~~~v~~~~~~~~~~l~~~lglsnGYlt 361 (406)
T KOG1479|consen 287 LVFLSFNVFDLIGSILAALLTWPD-PRKLT----IPVLLRLLFIPLFLLCNYPPLPVVFESDGWFIFLMSLLGLSNGYLT 361 (406)
T ss_pred HHHHHhHHHHHhhhhhhhcccCCC-Cceeh----HHHHHHHHHHHHHHHhccCCCCceecCchHHHHHHHHHHhccchHh
Confidence 5555 8899999988877764443 22221 11122222222222111 3445566777888888877666
Q ss_pred hhHHHHHHHhhCCCchhhHHHHHHhHhhhh
Q 017795 246 AIVPAAASELFGLKSFGALYNFLTLASPAG 275 (366)
Q Consensus 246 ~~~~~~~se~f~~~~~g~~~g~~~~~~~~G 275 (366)
++...++++..++++.-.+-+++...-..|
T Consensus 362 sl~m~~aPk~v~~~e~e~aG~~m~~fl~~G 391 (406)
T KOG1479|consen 362 SLIMMYAPKQVKPSEKEAAGNLMVFFLVGG 391 (406)
T ss_pred hheehhcCCCCChHHHHHHHHHHHHHHHHH
Confidence 666666677766665554444444443333
No 288
>PF12832 MFS_1_like: MFS_1 like family
Probab=52.31 E-value=92 Score=22.89 Aligned_cols=30 Identities=10% Similarity=0.105 Sum_probs=24.1
Q ss_pred hhHHHHHHhHhhhhHHHhhhhHHHHHhhhhh
Q 017795 262 GALYNFLTLASPAGSLIFSGVIASGIYDYYA 292 (366)
Q Consensus 262 g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~ 292 (366)
..-.|+.....++-..+ ++++.|.+.|+.+
T Consensus 34 ~~~iGil~~i~~~~~~~-~~pl~g~laDk~~ 63 (77)
T PF12832_consen 34 PSQIGILSAIRPLIRFL-APPLWGFLADKFG 63 (77)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHC
Confidence 34567777777888886 8999999999997
No 289
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=50.81 E-value=1.1e+02 Score=31.52 Aligned_cols=55 Identities=18% Similarity=0.295 Sum_probs=25.1
Q ss_pred HHHHHHhhhhHHHHHhcHHHHHHHhCC-Ch--hHHHHHHHHHHHhhhhhhhhhhhhhh
Q 017795 142 FFSLVLASGSGLTVIDNLGQICQSLGY-AD--TSIYVSMISIWNFLGRVGGGYFSEAI 196 (366)
Q Consensus 142 ~~~~~~~~~~~~~~~~~l~~i~~~~g~-~~--~~~~~sl~~i~~~~g~~~~G~lsD~~ 196 (366)
.++.+++.+.........-.+...+|. ++ ...+++...+.-.++..++|+.|-|+
T Consensus 263 lls~lvG~G~Qll~~~~~~~~~a~~g~~~~~~rg~l~t~~i~~y~~~~~iaGy~S~~~ 320 (521)
T PF02990_consen 263 LLSALVGTGIQLLFMALVTLFFAALGFLSPNNRGSLLTAAIILYALTSFIAGYVSARL 320 (521)
T ss_pred HHHhHhcchhhhhHHHHHHHHHHHhhhccccCcchHHHHHHHHHHHHhhHHHHHHHHH
Confidence 334445555544444333334444443 11 12244444444455556666666554
No 290
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=48.65 E-value=47 Score=26.42 Aligned_cols=19 Identities=21% Similarity=0.300 Sum_probs=12.9
Q ss_pred HHHhhhhhhhhhhhhhhhh
Q 017795 180 IWNFLGRVGGGYFSEAIVR 198 (366)
Q Consensus 180 i~~~~g~~~~G~lsD~~gr 198 (366)
+.+.+...+.||+-|++-.
T Consensus 53 IsGilVGa~iG~llD~~ag 71 (116)
T COG5336 53 ISGILVGAGIGWLLDKFAG 71 (116)
T ss_pred HHHHHHHHHHHHHHHHhcC
Confidence 4455556677899999843
No 291
>PTZ00370 STEVOR; Provisional
Probab=48.46 E-value=56 Score=30.68 Aligned_cols=33 Identities=15% Similarity=0.376 Sum_probs=24.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHH
Q 017795 325 YSITCGIMAGLCIIAMVMSLIVVHRTKSVYAQL 357 (366)
Q Consensus 325 ~~~~f~i~~~~~~~~~~~~~~~~~~~r~~~~~~ 357 (366)
|..+-+++.++.++-.++.+|+++|+++.++.-
T Consensus 257 ygiaalvllil~vvliilYiwlyrrRK~swkhe 289 (296)
T PTZ00370 257 YGIAALVLLILAVVLIILYIWLYRRRKNSWKHE 289 (296)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHH
Confidence 666767777777777788888888877777643
No 292
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=46.97 E-value=3.4e+02 Score=27.84 Aligned_cols=42 Identities=19% Similarity=0.263 Sum_probs=35.3
Q ss_pred hHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhh
Q 017795 247 IVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYD 289 (366)
Q Consensus 247 ~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d 289 (366)
+.+..+-|+...++..+-|++.++..+++.++ ++.+.+++..
T Consensus 168 lFw~faNeitt~~eakRFy~lf~l~~ni~lll-sg~~~~~~~k 209 (509)
T COG3202 168 LFWQFANEITTIEEAKRFYPLFGLGANISLLL-SGEVTSWLSK 209 (509)
T ss_pred HHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHH-HHHHHHHHhh
Confidence 55677889999999999999999999999996 7777777655
No 293
>COG4603 ABC-type uncharacterized transport system, permease component [General function prediction only]
Probab=46.05 E-value=3e+02 Score=26.92 Aligned_cols=32 Identities=25% Similarity=0.522 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHhhhhhhhHHHHHHHhhCCCc
Q 017795 229 EIYVTTVLVGLSYGAHWAIVPAAASELFGLKS 260 (366)
Q Consensus 229 ~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~ 260 (366)
......++.|...|+.|+..+++..-.|+.++
T Consensus 113 l~~p~a~l~g~~~G~~wa~ipg~Lka~f~~nE 144 (356)
T COG4603 113 LALPLALLAGAAGGGLWALIPGLLKARFGVNE 144 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCccH
Confidence 34556677888889999999999999999887
No 294
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=43.72 E-value=58 Score=25.94 Aligned_cols=31 Identities=16% Similarity=0.145 Sum_probs=21.2
Q ss_pred hhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhh
Q 017795 261 FGALYNFLTLASPAGSLIFSGVIASGIYDYYA 292 (366)
Q Consensus 261 ~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~ 292 (366)
.+.+.++-...-.+++.+. +...||+.|++.
T Consensus 40 k~~~~a~klssefIsGilV-Ga~iG~llD~~a 70 (116)
T COG5336 40 KGYAQAFKLSSEFISGILV-GAGIGWLLDKFA 70 (116)
T ss_pred hhhhhhHHHHHHHHHHHHH-HHHHHHHHHHhc
Confidence 4555555555666677754 567899999986
No 295
>COG1288 Predicted membrane protein [Function unknown]
Probab=43.54 E-value=3.5e+02 Score=27.29 Aligned_cols=15 Identities=20% Similarity=0.301 Sum_probs=8.3
Q ss_pred HHHHHHHhhhhhhhh
Q 017795 24 GLIIIILLPVTIPVV 38 (366)
Q Consensus 24 ~~~~ll~~pi~~~~~ 38 (366)
+.+..+++|+.+...
T Consensus 159 iaFypIliPv~ialG 173 (481)
T COG1288 159 IAFYPILIPLMVALG 173 (481)
T ss_pred HHHHHHHHHHHHHhC
Confidence 445556666665543
No 296
>PF14851 FAM176: FAM176 family
Probab=42.32 E-value=55 Score=27.83 Aligned_cols=29 Identities=7% Similarity=-0.007 Sum_probs=23.6
Q ss_pred cchHHHHHHHHHHHHHHHhhhhhhhhccc
Q 017795 13 ANQNVLTVLAVGLIIIILLPVTIPVVLVF 41 (366)
Q Consensus 13 ~~~~~~~~~~~~~~~ll~~pi~~~~~~~~ 41 (366)
-.+.+.|++..|.++|++.-++++++...
T Consensus 19 PE~~aLYFv~gVC~GLlLtLcllV~risc 47 (153)
T PF14851_consen 19 PERFALYFVSGVCAGLLLTLCLLVIRISC 47 (153)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhhee
Confidence 36778899999999999988888877644
No 297
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=36.92 E-value=2.9e+02 Score=24.22 Aligned_cols=20 Identities=10% Similarity=0.192 Sum_probs=10.6
Q ss_pred hhhHHHhhhhHHHHHhhhhh
Q 017795 273 PAGSLIFSGVIASGIYDYYA 292 (366)
Q Consensus 273 ~~G~~i~gp~i~G~l~d~~~ 292 (366)
.+.+++.|..+++.+++..+
T Consensus 171 ~i~~f~~Ga~~ga~l~~~~~ 190 (209)
T PF06912_consen 171 IILSFFIGAILGALLYRRLG 190 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 33444445555666666655
No 298
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=36.14 E-value=3.5e+02 Score=27.13 Aligned_cols=50 Identities=16% Similarity=0.066 Sum_probs=40.3
Q ss_pred hhhhhhHHHHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhh
Q 017795 242 GAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYA 292 (366)
Q Consensus 242 g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~ 292 (366)
..++....+..+++.++..-|+.+.+.|...++|+.- -..+++++.|...
T Consensus 384 ts~fv~~maf~aqisdp~iggTymTlLNTLsnLGg~w-p~tv~l~l~D~lt 433 (510)
T KOG3574|consen 384 TSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLGGNW-PGTVALWLADGLT 433 (510)
T ss_pred HHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhcCCc-HHHHHHHhcccCc
Confidence 3344445566788888999999999999999999995 5788899998765
No 299
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=36.13 E-value=4.2e+02 Score=25.80 Aligned_cols=101 Identities=15% Similarity=0.169 Sum_probs=58.9
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHH---H-hcchhHHHHHHHHHHHHhhhhhhhHH
Q 017795 174 YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYY---A-IGWPGEIYVTTVLVGLSYGAHWAIVP 249 (366)
Q Consensus 174 ~~sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~---~-~~~~~~l~~~~~l~G~~~g~~~~~~~ 249 (366)
+-.++.++-++.|-- -++ ..+|-.+.+.+.+.+..+-+++- . ..+.+.+.+..+.=|+-.|+.+...+
T Consensus 293 yqvlYQlGVFiSRSS-----~~~---~~~p~l~~LailQ~vNl~ff~~~a~~~ftpsi~ivf~lI~~EGLlGGasYVNTf 364 (409)
T KOG3880|consen 293 YQVLYQLGVFISRSS-----INL---FTMPYLWLLAILQFVNLLFFLLQAWYWFTPSIWIVFALILFEGLLGGASYVNTF 364 (409)
T ss_pred hheeeeeeEEEEecc-----ceE---EechHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhcCchHHHHHH
Confidence 555666665554432 222 22333345555555554433331 1 22233333444445887788888887
Q ss_pred HHHHHhhCCCchhhHHHHHHhHhhhhHHHhhhhH
Q 017795 250 AAASELFGLKSFGALYNFLTLASPAGSLIFSGVI 283 (366)
Q Consensus 250 ~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~i 283 (366)
--+.+-..+++|--+++...+.-.+|-.+ +..+
T Consensus 365 ~~i~~e~~pd~rEfamsavs~sDS~Gi~l-A~~l 397 (409)
T KOG3880|consen 365 HNIHKETEPDVREFAMSAVSISDSIGIFL-AGLL 397 (409)
T ss_pred HHHhhcCCchHHHHhHhhheecchhhHHH-HHHH
Confidence 77777777888888999888888877774 4433
No 300
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=35.70 E-value=4.9e+02 Score=26.45 Aligned_cols=46 Identities=7% Similarity=0.071 Sum_probs=33.0
Q ss_pred hhHHHHHHHhhCCC-chhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhh
Q 017795 246 AIVPAAASELFGLK-SFGALYNFLTLASPAGSLIFSGVIASGIYDYYA 292 (366)
Q Consensus 246 ~~~~~~~se~f~~~-~~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~ 292 (366)
...-..+.+.+|.+ .++..+|-+....++.+.+ -..+.+.+..+.|
T Consensus 285 ~~~k~~v~~~~p~~~~~~~f~g~~~~~~gi~tl~-~~l~~~~l~~~~G 331 (472)
T TIGR00769 285 VTWKSKLKAQYPSPNEYSAFMGDFSTWTGVVSVT-MMLLSGNVIRKYG 331 (472)
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhh
Confidence 33345667888754 4888888888887877765 3555688888887
No 301
>PHA03237 envelope glycoprotein M; Provisional
Probab=31.19 E-value=5.3e+02 Score=25.80 Aligned_cols=40 Identities=13% Similarity=0.056 Sum_probs=22.3
Q ss_pred HHHHHHHHHHhhhhhhhHHHHHHHhhCCCc----hhhHHHHHHh
Q 017795 231 YVTTVLVGLSYGAHWAIVPAAASELFGLKS----FGALYNFLTL 270 (366)
Q Consensus 231 ~~~~~l~G~~~g~~~~~~~~~~se~f~~~~----~g~~~g~~~~ 270 (366)
..-.++.++..-...++.+-++.|.+=.+. +|...|.+..
T Consensus 255 ~~~~v~~ai~~F~vl~iiyliv~E~vL~rYv~vl~G~~lG~lia 298 (424)
T PHA03237 255 LWQTITVAIGVFVALTLMYLLIVEFVVSRYVHVLPGPALGLLIA 298 (424)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHH
Confidence 334444455555566777777777764443 4555554433
No 302
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=31.02 E-value=2.4e+02 Score=21.48 Aligned_cols=25 Identities=20% Similarity=0.234 Sum_probs=14.6
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhh
Q 017795 174 YVSMISIWNFLGRVGGGYFSEAIVR 198 (366)
Q Consensus 174 ~~sl~~i~~~~g~~~~G~lsD~~gr 198 (366)
......++..++..+.|.+.|..+.
T Consensus 92 ~~~~~~~g~~~~~~~~~~~~~~~~~ 116 (141)
T TIGR00880 92 MSAGIALGPLLGPPLGGVLAQFLGW 116 (141)
T ss_pred HHHhHHHHHHHhHHhHHHHhcccch
Confidence 3444455666666666776665543
No 303
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=30.89 E-value=1.6e+02 Score=30.24 Aligned_cols=10 Identities=20% Similarity=0.733 Sum_probs=3.8
Q ss_pred hhhHHHHHhh
Q 017795 280 SGVIASGIYD 289 (366)
Q Consensus 280 gp~i~G~l~d 289 (366)
++.+++.+|.
T Consensus 313 aGy~S~~~yk 322 (521)
T PF02990_consen 313 AGYVSARLYK 322 (521)
T ss_pred HHHHHHHHHH
Confidence 3333333333
No 304
>COG4298 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=28.23 E-value=2.4e+02 Score=21.42 Aligned_cols=37 Identities=16% Similarity=0.156 Sum_probs=28.0
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHhhc
Q 017795 324 CYSITCGIMAGLCIIAMVMSLIVVHRTKSVYAQLYGN 360 (366)
Q Consensus 324 ~~~~~f~i~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 360 (366)
.|.-.|+.++.+.+.+..+.+.-..|.++.++++-.+
T Consensus 42 ~w~KGy~~MG~lfltgSt~tL~K~~rD~he~~rl~ar 78 (95)
T COG4298 42 LWTKGYWAMGILFLTGSTVTLVKYRRDEHESARLSAR 78 (95)
T ss_pred HHHHHHHHHHHHHHhcchhhhhHHhhhHHHHHHHHHH
Confidence 3888999999988888888877777766666665443
No 305
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=27.98 E-value=2.7e+02 Score=28.33 Aligned_cols=31 Identities=10% Similarity=0.049 Sum_probs=20.3
Q ss_pred hhhHHHHHHhHhhhhHHHhhhhHHHHHhhhhh
Q 017795 261 FGALYNFLTLASPAGSLIFSGVIASGIYDYYA 292 (366)
Q Consensus 261 ~g~~~g~~~~~~~~G~~i~gp~i~G~l~d~~~ 292 (366)
.|...|+.+....+...+ .....|-+.|..|
T Consensus 442 ~G~~~gvln~~I~ipQvi-vs~~~Gp~~~~~G 472 (498)
T KOG0637|consen 442 QGLDLGVLNCAIVIPQVL-VSLGLGPLDQLFG 472 (498)
T ss_pred CCceeeeeeeeeeehhhe-eeccccchhhhcC
Confidence 466677777777777775 4444566666665
No 306
>PHA02844 putative transmembrane protein; Provisional
Probab=27.89 E-value=1.5e+02 Score=21.83 Aligned_cols=30 Identities=7% Similarity=-0.052 Sum_probs=15.9
Q ss_pred CcccCCcchHHHHHHHHHHHHHHHHHHHHH
Q 017795 317 PTCLGSICYSITCGIMAGLCIIAMVMSLIV 346 (366)
Q Consensus 317 ~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~ 346 (366)
..|....++.|..+++..+.++.+++..++
T Consensus 38 ~~~~~~~~~~~~~~ii~i~~v~~~~~~~fl 67 (75)
T PHA02844 38 VNKNNVCSSSTKIWILTIIFVVFATFLTFL 67 (75)
T ss_pred ccccccCChhHHHHHHHHHHHHHHHHHHHH
Confidence 455444456666666665555444444443
No 307
>PHA02819 hypothetical protein; Provisional
Probab=27.84 E-value=1.6e+02 Score=21.43 Aligned_cols=30 Identities=10% Similarity=0.039 Sum_probs=15.9
Q ss_pred CcccCCcchHHHHHHHHHHHHHHHHHHHHH
Q 017795 317 PTCLGSICYSITCGIMAGLCIIAMVMSLIV 346 (366)
Q Consensus 317 ~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~ 346 (366)
+.|....++.|..+++..+.++.+++..++
T Consensus 36 ~~~~~~~~~~~~~~ii~l~~~~~~~~~~fl 65 (71)
T PHA02819 36 YNKKTKKSFLRYYLIIGLVTIVFVIIFIIF 65 (71)
T ss_pred CcccccCChhHHHHHHHHHHHHHHHHHHHH
Confidence 455444466776666665554444443333
No 308
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=25.90 E-value=1e+02 Score=25.11 Aligned_cols=14 Identities=43% Similarity=0.662 Sum_probs=6.1
Q ss_pred HHHHHHHHHHHHHH
Q 017795 327 ITCGIMAGLCIIAM 340 (366)
Q Consensus 327 ~~f~i~~~~~~~~~ 340 (366)
.+|.+++++.++.+
T Consensus 69 Ii~gv~aGvIg~Il 82 (122)
T PF01102_consen 69 IIFGVMAGVIGIIL 82 (122)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHH
Confidence 34444444444333
No 309
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=25.14 E-value=5.5e+02 Score=23.77 Aligned_cols=25 Identities=8% Similarity=0.082 Sum_probs=10.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcHH
Q 017795 328 TCGIMAGLCIIAMVMSLIVVHRTKS 352 (366)
Q Consensus 328 ~f~i~~~~~~~~~~~~~~~~~~~r~ 352 (366)
.+.+.|++.-....+.++...+.|+
T Consensus 76 ~l~~~Gglwy~~lsl~~~~l~p~r~ 100 (284)
T PF12805_consen 76 LLFLAGGLWYLLLSLLWWPLRPYRP 100 (284)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 4444444444433333333444443
No 310
>PHA03242 envelope glycoprotein M; Provisional
Probab=24.70 E-value=6.7e+02 Score=25.13 Aligned_cols=40 Identities=15% Similarity=-0.091 Sum_probs=21.9
Q ss_pred HHHHHHHHHhhhhhhhHHHHHHHhhCCCc----hhhHHHHHHhH
Q 017795 232 VTTVLVGLSYGAHWAIVPAAASELFGLKS----FGALYNFLTLA 271 (366)
Q Consensus 232 ~~~~l~G~~~g~~~~~~~~~~se~f~~~~----~g~~~g~~~~~ 271 (366)
.-.++..+..-...++.+-++.|.+=.+. +|...|.+...
T Consensus 253 ~~~v~~ai~~F~vL~ii~liv~E~vL~~Yv~vl~G~~lG~lia~ 296 (428)
T PHA03242 253 PGTLVCLTAVFALLVVLLLVVVEGVLSHYVRVLPGPHLGALVAA 296 (428)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccchHHHHHHH
Confidence 33444445555556777777777764443 55555554433
No 311
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=24.32 E-value=9.1e+02 Score=25.97 Aligned_cols=33 Identities=12% Similarity=0.167 Sum_probs=14.6
Q ss_pred HHHHHHHHHHHHHHH--hcchhHHHHHHHHHHHHh
Q 017795 209 AVAQVVMAFALLYYA--IGWPGEIYVTTVLVGLSY 241 (366)
Q Consensus 209 ~~~~~~~~~~~~l~~--~~~~~~l~~~~~l~G~~~ 241 (366)
.++.++++++.+... ...++.+..+.++.+++.
T Consensus 61 ~~t~~~f~i~sl~v~ll~~~p~lf~~~l~~~tf~~ 95 (704)
T TIGR01666 61 IFTLICFSIASFSVELLFGKPWLFAVGLTVSTFGF 95 (704)
T ss_pred HHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHH
Confidence 344444444444322 444554444444444443
No 312
>TIGR01478 STEVOR variant surface antigen, stevor family. This model represents the stevor branch of the rifin/stevor family (pfam02009) of predicted variant surface antigens as found in Plasmodium falciparum. This model is based on a set of stevor sequences kindly provided by Matt Berriman from the Sanger Center. This is a global model and assesses a penalty for incomplete sequence. Additional fragmentary sequences may be found with the fragment model and a cutoff of 8 bits.
Probab=23.08 E-value=1.1e+02 Score=28.77 Aligned_cols=31 Identities=16% Similarity=0.402 Sum_probs=20.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhcHHHHH
Q 017795 325 YSITCGIMAGLCIIAMVMSLIVVHRTKSVYA 355 (366)
Q Consensus 325 ~~~~f~i~~~~~~~~~~~~~~~~~~~r~~~~ 355 (366)
|..+-+++.++.++-.++.+|+++|+++.++
T Consensus 261 cgiaalvllil~vvliiLYiWlyrrRK~swk 291 (295)
T TIGR01478 261 YGIAALVLIILTVVLIILYIWLYRRRKKSWK 291 (295)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Confidence 6666666666666666777777766655443
No 313
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=22.82 E-value=2.2e+02 Score=24.24 Aligned_cols=25 Identities=20% Similarity=0.018 Sum_probs=16.3
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhh
Q 017795 174 YVSMISIWNFLGRVGGGYFSEAIVR 198 (366)
Q Consensus 174 ~~sl~~i~~~~g~~~~G~lsD~~gr 198 (366)
++++..++..+.++-.|.+|-.+-.
T Consensus 101 ~~S~~~Fg~gllGisYGilSaSWD~ 125 (153)
T PF11947_consen 101 LVSLVFFGLGLLGISYGILSASWDP 125 (153)
T ss_pred HHHHHHHHHHHHhhhhhhcccccCC
Confidence 5555556666666667888877644
No 314
>PRK14984 high-affinity gluconate transporter; Provisional
Probab=22.09 E-value=7.8e+02 Score=24.79 Aligned_cols=15 Identities=13% Similarity=0.273 Sum_probs=8.2
Q ss_pred HHHHHHHHHhhhhhh
Q 017795 174 YVSMISIWNFLGRVG 188 (366)
Q Consensus 174 ~~sl~~i~~~~g~~~ 188 (366)
+.-++.++..+|+++
T Consensus 61 i~iii~lGai~G~~l 75 (438)
T PRK14984 61 LALIMGFGAMLGKML 75 (438)
T ss_pred HHHHHHHHHHHHHHH
Confidence 344555566666553
No 315
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=20.91 E-value=3.2e+02 Score=26.72 Aligned_cols=59 Identities=12% Similarity=0.145 Sum_probs=31.9
Q ss_pred hhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHhcc----hhHHHHHHHHHHHHhhhhhhhHHHHH
Q 017795 184 LGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAIGW----PGEIYVTTVLVGLSYGAHWAIVPAAA 252 (366)
Q Consensus 184 ~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~~~----~~~l~~~~~l~G~~~g~~~~~~~~~~ 252 (366)
...++.+.+..++|-|+.+ . ++...+.++...+ ...++-...+.|++.+..|+...+++
T Consensus 73 ~s~m~~~~~Ir~~g~K~tm------~----lav~~Y~lyiA~Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYl 135 (390)
T KOG3097|consen 73 DSSMFMPLLIRFLGTKWTM------V----LAVFPYALYIAANLEPRYETLVPAGLVLGMAAGPIWASKGTYL 135 (390)
T ss_pred HHHHHHHHHHHHHhhHHHH------H----HHHHHHHHHHHhhcchhHHhhccHHHhhccccccccccCccee
Confidence 3444444666677766433 2 2222333332222 22455677788888888877655544
No 316
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=20.35 E-value=1.1e+03 Score=25.37 Aligned_cols=33 Identities=9% Similarity=0.096 Sum_probs=14.6
Q ss_pred HHHHHHHHHHHHHHH--hcchhHHHHHHHHHHHHh
Q 017795 209 AVAQVVMAFALLYYA--IGWPGEIYVTTVLVGLSY 241 (366)
Q Consensus 209 ~~~~~~~~~~~~l~~--~~~~~~l~~~~~l~G~~~ 241 (366)
.++.++++++.+... ...+..+....++.+++.
T Consensus 61 ~it~~~f~i~sl~v~ll~~~p~~~~~~l~~~tf~~ 95 (701)
T TIGR01667 61 IITLSCFSIASFLVQLLFPKPWLFPFLLTLLTFGF 95 (701)
T ss_pred HHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 444444444444432 344444444444444443
Done!