BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017799
(365 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8GUN5|PHL1_ARATH Protein PHR1-LIKE 1 OS=Arabidopsis thaliana GN=PHL1 PE=1 SV=1
Length = 413
Score = 256 bits (654), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 166/357 (46%), Positives = 221/357 (61%), Gaps = 28/357 (7%)
Query: 17 NNLGVSGPMSSSLSVLPTPLEDTYSKLPNSQQVYMEQELRTRPLAPAPHIPANSGVVGHI 76
N+ G S MSSS S L T +ED Y KLPNS V QEL P+ NSG G++
Sbjct: 5 NDFGYSTAMSSSYSALHTSVEDRYHKLPNSFWVSSGQELMNNPVPCQSVSGGNSG--GYL 62
Query: 77 FSSSSGLSSDLQYSSASPHEKLPRTTSFISQSSTPIPQTSHSGLP---QSSTSSHYTKES 133
F SSSG + S+ PH + + +S + P + + P QSS +H+ +E
Sbjct: 63 FPSSSGYCN---VSAVLPHGRNLQNQPPVS--TVPRDRLAMQDCPLIAQSSLINHHPQE- 116
Query: 134 SSSWCPESLPGYVDFAANTPVQNSQMEGSSCSGAIV--SEEFSKRNDWHEWADQLITDDD 191
+ L + DF+ + PVQN Q E S G V S E K+++W +WADQLI+ DD
Sbjct: 117 ----FIDPLHEFFDFSDHVPVQNLQAESS---GVRVDSSVELHKKSEWQDWADQLISVDD 169
Query: 192 PLGSSWNEILADTSMTEMEPKMSYQVPKTPTSMPAHRTQVHQQLPASSTEIRTVVTPSAS 251
+W+E+L D+S P + ++P +P +QQ S+E + + ++S
Sbjct: 170 GSEPNWSELLGDSS--SHNP--NSEIPTPFLDVPRLDITANQQQQMVSSEDQ-LSGRNSS 224
Query: 252 ANNAPAKPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYR 311
++ A +K RMRWTPELHEAFVEAVNQLGGSERATPK VLKL+ GLTIYHVKSHLQKYR
Sbjct: 225 SSVATSKQRMRWTPELHEAFVEAVNQLGGSERATPKAVLKLLNNPGLTIYHVKSHLQKYR 284
Query: 312 TARYRPDSSEGSS---EKRLTPLEEISSLDLKTGIEITEALRLQMEVQKRLHEQLEV 365
TARY+P++SE + EK++T +E+I SLD+KT +EIT+ALRLQMEVQKRLHEQLE+
Sbjct: 285 TARYKPETSEVTGEPQEKKMTSIEDIKSLDMKTSVEITQALRLQMEVQKRLHEQLEI 341
>sp|Q9SAK5|APL_ARATH Myb family transcription factor APL OS=Arabidopsis thaliana GN=APL
PE=2 SV=2
Length = 358
Score = 108 bits (269), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 77/114 (67%), Gaps = 9/114 (7%)
Query: 258 KPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRTAR--- 314
KPR+RWT ELHE FV+AV QLGG ++ATPK ++++M V+GLT+YH+KSHLQK+R +
Sbjct: 34 KPRLRWTVELHERFVDAVAQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPH 93
Query: 315 --YRPDSS-EGSSEKRLTPLEEISSLDLKTGIEITEALRLQMEVQKRLHEQLEV 365
Y S+ EGS + ++S +G+ +QMEVQ+RLHEQLEV
Sbjct: 94 KEYGDHSTKEGSRASAMDIQRNVAS---SSGMMSRNMNEMQMEVQRRLHEQLEV 144
>sp|Q700D9|MYBF_ARATH Putative Myb family transcription factor At1g14600 OS=Arabidopsis
thaliana GN=At1g14600 PE=2 SV=2
Length = 255
Score = 88.2 bits (217), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 39/56 (69%), Positives = 46/56 (82%)
Query: 259 PRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRTAR 314
PR+RWTPELH +FV AV+ LGG +ATPK VLK+M V+GLTI HVKSHLQ YR +R
Sbjct: 24 PRLRWTPELHRSFVHAVDLLGGQYKATPKLVLKIMDVKGLTISHVKSHLQMYRGSR 79
>sp|Q93WJ9|KAN1_ARATH Transcription repressor KAN1 OS=Arabidopsis thaliana GN=KAN1 PE=1
SV=1
Length = 403
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 57/90 (63%), Gaps = 3/90 (3%)
Query: 242 IRTVVTPSASANNAPAKPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIY 301
IR+ P + PRMRWT LH FV AV LGG ERATPK VL+LM V+ LT+
Sbjct: 203 IRSRFLPKMPTKRSMRAPRMRWTSSLHARFVHAVELLGGHERATPKSVLELMDVKDLTLA 262
Query: 302 HVKSHLQKYRTAR--YRP-DSSEGSSEKRL 328
HVKSHLQ YRT + +P SS+GS E+ +
Sbjct: 263 HVKSHLQMYRTVKTTNKPAASSDGSGEEEM 292
>sp|Q941I2|KAN3_ARATH Probable transcription factor KAN3 OS=Arabidopsis thaliana GN=KAN3
PE=2 SV=1
Length = 322
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 248 PSASANNAPAKPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHL 307
P +A PRMRWT LH FV AV LGG ERATPK VL+LM V+ LT+ HVKSHL
Sbjct: 154 PRFTAKRGVRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMDVQDLTLAHVKSHL 213
Query: 308 QKYRTARY--RPDSSEGSSE 325
Q YRT + +P +S G S+
Sbjct: 214 QMYRTIKSTEKPTTSSGQSD 233
>sp|Q9C616|KAN2_ARATH Probable transcription factor KAN2 OS=Arabidopsis thaliana GN=KAN2
PE=2 SV=1
Length = 388
Score = 85.5 bits (210), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 52/92 (56%), Gaps = 6/92 (6%)
Query: 223 SMPAHRTQVHQQLPASSTEIRTVVTPSASANNAPAKPRMRWTPELHEAFVEAVNQLGGSE 282
S P + HQ L R P A + PRMRWT LH FV AV LGG E
Sbjct: 184 SNPNYHNHHHQTLN------RARFMPRFPAKRSMRAPRMRWTTTLHARFVHAVELLGGHE 237
Query: 283 RATPKGVLKLMKVEGLTIYHVKSHLQKYRTAR 314
RATPK VL+LM V+ LT+ HVKSHLQ YRT +
Sbjct: 238 RATPKSVLELMDVKDLTLAHVKSHLQMYRTVK 269
>sp|Q9FJV5|KAN4_ARATH Probable transcription factor KAN4 OS=Arabidopsis thaliana GN=KAN4
PE=1 SV=1
Length = 276
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/70 (61%), Positives = 47/70 (67%), Gaps = 2/70 (2%)
Query: 259 PRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRTARYRPD 318
PRMRWT LH FV AV LGG ERATPK VL+LM V+ LT+ HVKSHLQ YRT +
Sbjct: 106 PRMRWTSTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKCTDK 165
Query: 319 SS--EGSSEK 326
S EG EK
Sbjct: 166 GSPGEGKVEK 175
>sp|Q0J235|ROLL9_ORYSJ Probable transcription factor RL9 OS=Oryza sativa subsp. japonica
GN=RL9 PE=2 SV=2
Length = 532
Score = 83.2 bits (204), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 49/69 (71%), Gaps = 2/69 (2%)
Query: 259 PRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRTARY--R 316
PRMRWT LH FV AV LGG ERATPK VL+LM V+ LT+ HVKSHLQ YRT + +
Sbjct: 325 PRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKSTDK 384
Query: 317 PDSSEGSSE 325
P +S G ++
Sbjct: 385 PAASSGPAD 393
>sp|Q940D0|ARR1_ARATH Two-component response regulator ARR1 OS=Arabidopsis thaliana
GN=ARR1 PE=1 SV=2
Length = 690
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Query: 258 KPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRTARYR 316
KPR+ W+ ELH+ FV AVNQLG E+A PK +L+LM V GLT +V SHLQKYR R
Sbjct: 237 KPRVVWSVELHQQFVAAVNQLG-VEKAVPKKILELMNVPGLTRENVASHLQKYRIYLRR 294
>sp|Q9FFH0|GLK2_ARATH Transcription activator GLK2 OS=Arabidopsis thaliana GN=GLK2 PE=2
SV=1
Length = 386
Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 253 NNAPAKPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRT 312
N+ KP++ WTPELH FV+AV QL G ++A P +L++M V+ LT ++V SHLQKYR+
Sbjct: 142 NDIKKKPKVDWTPELHRKFVQAVEQL-GVDKAVPSRILEIMNVKSLTRHNVASHLQKYRS 200
Query: 313 AR 314
R
Sbjct: 201 HR 202
>sp|Q9FGT7|ARR18_ARATH Two-component response regulator ARR18 OS=Arabidopsis thaliana
GN=ARR18 PE=2 SV=2
Length = 635
Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 48/73 (65%), Gaps = 4/73 (5%)
Query: 258 KPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRTARYRP 317
KPR+ W+ ELH+ FV AV QLG ++A PK +L LM +EGLT +V SHLQKYR +
Sbjct: 194 KPRVVWSQELHQKFVSAVQQLG-LDKAVPKKILDLMSIEGLTRENVASHLQKYRLYLKKI 252
Query: 318 DSSEGSSEKRLTP 330
D + ++ +TP
Sbjct: 253 DEGQ---QQNMTP 262
>sp|Q9LZJ8|ARR20_ARATH Putative two-component response regulator ARR20 OS=Arabidopsis
thaliana GN=ARR20 PE=2 SV=1
Length = 426
Score = 69.3 bits (168), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 48/79 (60%), Gaps = 14/79 (17%)
Query: 258 KPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMK----VEGLTIYHVKSHLQKYRTA 313
KPRM+WTPELH F AV ++G E+A PK +LK M+ V+GLT +V SHLQKYR
Sbjct: 211 KPRMQWTPELHHKFEVAVEKMGSLEKAFPKTILKYMQEELNVQGLTRNNVASHLQKYRQ- 269
Query: 314 RYRPDSSEGSSEKRLTPLE 332
SS+K TP E
Sbjct: 270 ---------SSKKTCTPQE 279
>sp|Q9ZWJ9|ARR2_ARATH Two-component response regulator ARR2 OS=Arabidopsis thaliana
GN=ARR2 PE=1 SV=1
Length = 664
Score = 68.6 bits (166), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Query: 258 KPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRTARYR 316
KPR+ W+ ELH+ FV AVNQLG ++A PK +L++M V GLT +V SHLQKYR R
Sbjct: 216 KPRVVWSVELHQQFVAAVNQLG-VDKAVPKKILEMMNVPGLTRENVASHLQKYRIYLRR 273
>sp|O49397|ARR10_ARATH Two-component response regulator ARR10 OS=Arabidopsis thaliana
GN=ARR10 PE=1 SV=1
Length = 552
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 255 APAKPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRTA 313
A KPR+ WT ELH F+ AV+ LG ERA PK +L LM V+ LT +V SHLQK+R A
Sbjct: 180 AQKKPRVLWTHELHNKFLAAVDHLG-VERAVPKKILDLMNVDKLTRENVASHLQKFRVA 237
>sp|Q9M9B9|ARR19_ARATH Putative two-component response regulator ARR19 OS=Arabidopsis
thaliana GN=ARR19 PE=2 SV=2
Length = 407
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 43/59 (72%), Gaps = 3/59 (5%)
Query: 256 PAKPRMRWTPELHEAFVEAVNQLGGSERATPKGV---LKLMKVEGLTIYHVKSHLQKYR 311
P KPRM WT ELH+ F+EA+ +GG E+A PK + L+ M++EG+T +V SHLQK+R
Sbjct: 213 PRKPRMTWTEELHQKFLEAIEIIGGIEKANPKVLVECLQEMRIEGITRSNVASHLQKHR 271
>sp|Q9SIV3|GLK1_ARATH Transcription activator GLK1 OS=Arabidopsis thaliana GN=GLK1 PE=2
SV=2
Length = 420
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 251 SANNAPAKPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKY 310
S N K ++ WTPELH FVEAV QL G ++A P +L+LM V LT ++V SHLQKY
Sbjct: 146 SNNEGKRKVKVDWTPELHRRFVEAVEQL-GVDKAVPSRILELMGVHCLTRHNVASHLQKY 204
Query: 311 RTAR 314
R+ R
Sbjct: 205 RSHR 208
>sp|P62598|ARR12_ARATH Two-component response regulator ARR12 OS=Arabidopsis thaliana
GN=ARR12 PE=2 SV=2
Length = 596
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 255 APAKPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRTAR 314
A K R+ WT ELH+ FV AVNQLG E+A PK +L LM VE LT +V SHLQK+R
Sbjct: 192 AQKKQRVVWTVELHKKFVAAVNQLG-YEKAMPKKILDLMNVEKLTRENVASHLQKFRLYL 250
Query: 315 YR 316
R
Sbjct: 251 KR 252
>sp|Q6LA43|APRR2_ARATH Two-component response regulator-like APRR2 OS=Arabidopsis thaliana
GN=APRR2 PE=2 SV=2
Length = 535
Score = 65.1 bits (157), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 252 ANNAPAKPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYR 311
+ N ++ ++ WTPELH+ FV+AV QLG ++A P +L+LMKV LT ++V SHLQK+R
Sbjct: 290 SGNKTSRKKVDWTPELHKKFVQAVEQLG-VDQAIPSRILELMKVGTLTRHNVASHLQKFR 348
Query: 312 TAR 314
R
Sbjct: 349 QHR 351
>sp|Q5NAN5|GLK2_ORYSJ Probable transcription factor GLK2 OS=Oryza sativa subsp. japonica
GN=GLK2 PE=2 SV=1
Length = 539
Score = 65.1 bits (157), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 258 KPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRTAR 314
K ++ WTPELH FV+AV QLG ++A P +L+LM +E LT +++ SHLQKYR+ R
Sbjct: 215 KVKVDWTPELHRRFVQAVEQLG-IDKAVPSRILELMGIECLTRHNIASHLQKYRSHR 270
>sp|Q7Y0W5|EHD1_ORYSJ Two-component response regulator EHD1 OS=Oryza sativa subsp.
japonica GN=EHD1 PE=1 SV=1
Length = 341
Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 257 AKPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYR 311
K R+ WT +LH F+ AVN LG ++A PK +L +MKV+ LT V SHLQKYR
Sbjct: 197 GKSRLTWTTQLHRQFIAAVNHLG-EDKAVPKKILGIMKVKHLTREQVASHLQKYR 250
>sp|Q7Y0W3|EHD1_ORYSI Two-component response regulator EHD1 OS=Oryza sativa subsp. indica
PE=2 SV=1
Length = 341
Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 257 AKPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYR 311
K R+ WT +LH F+ AVN LG ++A PK +L +MKV+ LT V SHLQKYR
Sbjct: 197 GKSRLTWTTQLHRQFIAAVNHLG-EDKAVPKKILGIMKVKHLTREQVASHLQKYR 250
>sp|Q5Z5I4|GLK1_ORYSJ Probable transcription factor GLK1 OS=Oryza sativa subsp. japonica
GN=GLK1 PE=2 SV=1
Length = 455
Score = 62.0 bits (149), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 263 WTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRTAR 314
WTPELH FV+AV QL G ++A P +L++M ++ LT +++ SHLQKYR+ R
Sbjct: 185 WTPELHRRFVQAVEQL-GIDKAVPSRILEIMGIDSLTRHNIASHLQKYRSHR 235
>sp|Q8L9Y3|ARR14_ARATH Two-component response regulator ARR14 OS=Arabidopsis thaliana
GN=ARR14 PE=1 SV=2
Length = 382
Score = 61.6 bits (148), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 51/84 (60%), Gaps = 6/84 (7%)
Query: 258 KPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRTARYR- 316
K R+ W+ ELH+ FV AVN+LG ++A PK +L+LM V GL+ +V SHLQK+R R
Sbjct: 200 KSRVVWSIELHQQFVNAVNKLG-IDKAVPKRILELMNVPGLSRENVASHLQKFRLYLKRL 258
Query: 317 ----PDSSEGSSEKRLTPLEEISS 336
S++ S KR ++ + S
Sbjct: 259 SGEASQSNDSESTKRYENIQALVS 282
>sp|Q9FXD6|ARR11_ARATH Two-component response regulator ARR11 OS=Arabidopsis thaliana
GN=ARR11 PE=1 SV=1
Length = 521
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 35/52 (67%)
Query: 260 RMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYR 311
R+ W+ ELH FV AVNQ+G +A PK +L LM V LT +V SHLQKYR
Sbjct: 195 RVVWSFELHHKFVNAVNQIGCDHKAGPKKILDLMNVPWLTRENVASHLQKYR 246
>sp|Q9LYP5|ARR21_ARATH Putative two-component response regulator ARR21 OS=Arabidopsis
thaliana GN=ARR21 PE=2 SV=3
Length = 613
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 258 KPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRTARYR 316
K +++WT LH+ F++A+ +G ++A PK +L M V LT +V SHLQKYR R
Sbjct: 222 KKKIQWTDSLHDLFLQAIRHIG-LDKAVPKKILAFMSVPYLTRENVASHLQKYRIFLRR 279
>sp|Q9FJ16|APRR4_ARATH Putative two-component response regulator-like APRR4 OS=Arabidopsis
thaliana GN=APRR4 PE=3 SV=1
Length = 292
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 258 KPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQ 308
K R+ W ELH+ F+ AV+ LG ERA PK +L +MKV+ ++ +V SHLQ
Sbjct: 223 KRRVVWDEELHQNFLNAVDFLG-LERAVPKKILDVMKVDYISRENVASHLQ 272
>sp|Q9ZVD3|ARR13_ARATH Putative two-component response regulator ARR13 OS=Arabidopsis
thaliana GN=ARR13 PE=2 SV=2
Length = 572
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 256 PAKPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYR 311
P K ++ WT L + F++A+ +G ++ PK +L +M V LT +V SHLQKYR
Sbjct: 223 PKKKKIWWTNPLQDLFLQAIQHIG-YDKVVPKKILAIMNVPYLTRENVASHLQKYR 277
>sp|Q9C9F6|APRR6_ARATH Putative two-component response regulator-like APRR6 OS=Arabidopsis
thaliana GN=APRR6 PE=3 SV=2
Length = 755
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 263 WTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYR 311
W E H F+ A++ LG E PK +L++M LT V SHLQKY+
Sbjct: 227 WNSERHMKFIAAISILG-EEDFRPKSILEIMNDPNLTHRQVGSHLQKYK 274
>sp|Q9XH58|ETR1_PELHO Ethylene receptor 1 OS=Pelargonium hortorum GN=ETR1 PE=2 SV=1
Length = 740
Score = 36.6 bits (83), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 6/94 (6%)
Query: 96 EKLPRTTSFISQSSTPIPQTSHSGLPQSSTSSHY----TKESSSSWCPESLPG-YVDFAA 150
E + T+F+++S + + P SS + Y K+S S P+ +P + FA
Sbjct: 477 EGIISVTAFVAKSESVRDPRAPDFFPVSSDNQFYMRVQVKDSGSGINPQDMPKLFTKFAQ 536
Query: 151 NTPVQNSQMEGSSCSGAIVSEEFSKRNDWHEWAD 184
+ PV G S G +S+ F D H W D
Sbjct: 537 SQPVATKN-SGGSGLGLAISKRFVNLMDGHIWID 569
>sp|B0JY97|LEUC_MICAN 3-isopropylmalate dehydratase large subunit OS=Microcystis
aeruginosa (strain NIES-843) GN=leuC PE=3 SV=1
Length = 466
Score = 35.4 bits (80), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 52/122 (42%), Gaps = 13/122 (10%)
Query: 31 VLPTPLEDTYSKLPNSQQVYMEQELRTRPLAPAPHIPANSGVVGHIFSSSSGLSSDLQYS 90
V+PTP LP S++ E+ + L P I V + S ++G SDL+ +
Sbjct: 302 VIPTP-----ESLPASERAIAEEAYQYMKLTPGAPIKGTKIDVCFVGSCTNGRISDLREA 356
Query: 91 S--ASPHEKLPRTTSFISQSSTPI-PQTSHSGLPQSSTSSHYT-KESSSSWC----PESL 142
+ A H P +FI S + Q GL Q +S + +E+ S C P+ L
Sbjct: 357 AKFAQGHRVAPHVKAFIVPGSERVKKQAEAEGLDQIFLASGFEWREAGCSMCLAMNPDKL 416
Query: 143 PG 144
G
Sbjct: 417 QG 418
>sp|A1R6X5|SYL_ARTAT Leucine--tRNA ligase OS=Arthrobacter aurescens (strain TC1) GN=leuS
PE=3 SV=2
Length = 842
Score = 33.1 bits (74), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 13/75 (17%)
Query: 129 YTKESSSSWCPESLPGYVDFAANTPVQNSQMEGSSCSGAIVSEEFSKRNDWH----EWAD 184
Y K+S +WCP+ L T + N Q+ +C N W+ ++AD
Sbjct: 170 YRKDSPVNWCPKDL---------TVLANEQVVNGACERCGTPVTKKSLNQWYFKITDYAD 220
Query: 185 QLITDDDPLGSSWNE 199
+L+ D D L W E
Sbjct: 221 RLLEDMDQLQGHWPE 235
>sp|A0JX57|SYL_ARTS2 Leucine--tRNA ligase OS=Arthrobacter sp. (strain FB24) GN=leuS PE=3
SV=1
Length = 843
Score = 32.7 bits (73), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 13/75 (17%)
Query: 129 YTKESSSSWCPESLPGYVDFAANTPVQNSQMEGSSCSGAIVSEEFSKRNDWH----EWAD 184
Y K+S +WCP+ T + N Q+ +C + N W+ ++AD
Sbjct: 169 YRKDSPVNWCPKD---------QTVLANEQVVNGACERCGTAVTKKSLNQWYFKITDYAD 219
Query: 185 QLITDDDPLGSSWNE 199
+L+ D D L W E
Sbjct: 220 RLLDDMDELRGHWPE 234
>sp|Q9QY61|IRX4_MOUSE Iroquois-class homeodomain protein IRX-4 OS=Mus musculus GN=Irx4
PE=2 SV=1
Length = 515
Score = 31.6 bits (70), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query: 71 GVVGHIFSSSSGLSSDLQYSS-ASPHEKLPRTTSFISQSSTPIPQTSHSGLPQSSTSSHY 129
GV G + SS G + + Y S AS L SF S+ T +SH+GLP ++ +++Y
Sbjct: 71 GVYGSPYGSSQGYGNYVTYGSEASAFYSL---NSFESKDGT---GSSHAGLPPTAAAAYY 124
Query: 130 TKESSSSWCPESLPGYVD 147
E + S P G VD
Sbjct: 125 PYEPALSQYPYDRYGTVD 142
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.308 0.123 0.347
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 134,146,360
Number of Sequences: 539616
Number of extensions: 5660522
Number of successful extensions: 16463
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 206
Number of HSP's that attempted gapping in prelim test: 15308
Number of HSP's gapped (non-prelim): 872
length of query: 365
length of database: 191,569,459
effective HSP length: 119
effective length of query: 246
effective length of database: 127,355,155
effective search space: 31329368130
effective search space used: 31329368130
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 62 (28.5 bits)