Query 017800
Match_columns 365
No_of_seqs 430 out of 3281
Neff 9.7
Searched_HMMs 13730
Date Mon Mar 25 05:09:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017800.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/017800hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ogqa_ c.10.2.8 (A:) Polygala 100.0 3.9E-31 2.9E-35 239.3 12.0 255 8-285 51-313 (313)
2 d1ozna_ c.10.2.7 (A:) Reticulo 99.9 8.7E-24 6.3E-28 187.9 18.9 190 7-242 32-238 (284)
3 d1ogqa_ c.10.2.8 (A:) Polygala 99.9 1E-24 7.4E-29 196.7 10.4 208 5-240 74-302 (313)
4 d1p9ag_ c.10.2.7 (G:) von Will 99.9 1.2E-22 8.8E-27 178.7 19.8 203 5-278 8-211 (266)
5 d1p9ag_ c.10.2.7 (G:) von Will 99.9 5.8E-22 4.2E-26 174.3 17.7 178 7-242 31-208 (266)
6 d1ozna_ c.10.2.7 (A:) Reticulo 99.9 1.9E-21 1.4E-25 172.6 20.3 200 10-242 14-214 (284)
7 d2omza2 c.10.2.1 (A:33-416) In 99.9 4.6E-21 3.4E-25 176.8 19.2 253 5-271 42-382 (384)
8 d2omza2 c.10.2.1 (A:33-416) In 99.9 1.5E-20 1.1E-24 173.3 19.8 225 5-242 64-364 (384)
9 d1xkua_ c.10.2.7 (A:) Decorin 99.8 3.6E-20 2.6E-24 165.9 20.7 197 39-243 55-256 (305)
10 d1xkua_ c.10.2.7 (A:) Decorin 99.8 5.6E-20 4.1E-24 164.6 18.4 192 7-226 31-263 (305)
11 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.8 2.2E-19 1.6E-23 149.7 15.6 133 9-154 10-143 (192)
12 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.8 1.1E-18 8.3E-23 145.3 12.7 110 41-155 10-120 (192)
13 d1h6ta2 c.10.2.1 (A:31-240) In 99.8 4.6E-19 3.3E-23 149.9 8.1 165 6-238 45-209 (210)
14 d1h6ua2 c.10.2.1 (A:36-262) In 99.7 1E-17 7.3E-22 143.3 15.1 126 5-151 39-165 (227)
15 d2omxa2 c.10.2.1 (A:37-235) In 99.7 1.8E-18 1.3E-22 144.9 9.9 99 42-150 43-141 (199)
16 d1h6ua2 c.10.2.1 (A:36-262) In 99.7 1.1E-17 7.8E-22 143.1 10.4 187 8-242 20-208 (227)
17 d1jl5a_ c.10.2.6 (A:) Leucine 99.7 1.1E-15 7.7E-20 138.4 22.0 235 8-257 39-341 (353)
18 d2omxa2 c.10.2.1 (A:37-235) In 99.7 3.4E-16 2.5E-20 130.8 14.8 148 5-165 38-197 (199)
19 d1h6ta2 c.10.2.1 (A:31-240) In 99.7 3.8E-16 2.8E-20 131.6 13.0 141 5-169 66-207 (210)
20 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.6 3.8E-16 2.8E-20 134.4 12.1 113 39-153 53-169 (242)
21 d1dcea3 c.10.2.2 (A:444-567) R 99.6 5.3E-16 3.9E-20 119.2 10.3 104 42-151 1-104 (124)
22 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.6 1.4E-15 1E-19 130.9 11.9 201 10-242 11-214 (242)
23 d1jl5a_ c.10.2.6 (A:) Leucine 99.6 9.2E-14 6.7E-18 125.4 22.2 114 28-151 38-176 (353)
24 d1a9na_ c.10.2.4 (A:) Spliceso 99.6 1.5E-15 1.1E-19 122.3 8.3 87 59-150 14-100 (162)
25 d1dcea3 c.10.2.2 (A:444-567) R 99.6 7E-15 5.1E-19 112.8 10.7 104 10-126 1-105 (124)
26 d2ca6a1 c.10.1.2 (A:2-345) Rna 99.6 6.4E-16 4.7E-20 140.2 4.8 145 5-151 29-229 (344)
27 d1a9na_ c.10.2.4 (A:) Spliceso 99.5 3.8E-15 2.7E-19 119.9 8.1 126 39-168 18-145 (162)
28 d2astb2 c.10.1.3 (B:2136-2419) 99.5 2.5E-15 1.8E-19 132.5 1.2 83 39-121 46-131 (284)
29 d1z7xw1 c.10.1.1 (W:1-460) Rib 99.5 2.9E-15 2.1E-19 140.1 0.8 92 8-99 3-124 (460)
30 d2ca6a1 c.10.1.2 (A:2-345) Rna 99.4 1.5E-14 1.1E-18 131.1 3.6 198 5-242 57-315 (344)
31 d1m9la_ c.10.3.1 (A:) Outer ar 99.4 9.3E-16 6.8E-20 127.8 -5.6 90 55-151 40-129 (198)
32 d2ifga3 c.10.2.7 (A:36-191) Hi 99.4 1.8E-12 1.3E-16 103.3 10.9 106 41-150 10-116 (156)
33 d1z7xw1 c.10.1.1 (W:1-460) Rib 99.3 3.1E-13 2.3E-17 126.0 3.0 90 63-152 226-327 (460)
34 d1m9la_ c.10.3.1 (A:) Outer ar 99.3 2.2E-14 1.6E-18 119.4 -5.3 109 39-154 48-157 (198)
35 d2ifga3 c.10.2.7 (A:36-191) Hi 99.2 1.7E-11 1.2E-15 97.4 10.6 108 7-124 8-116 (156)
36 d2astb2 c.10.1.3 (B:2136-2419) 99.2 4.3E-12 3.1E-16 111.4 5.0 146 5-152 44-216 (284)
37 d1koha1 c.10.2.3 (A:201-362) m 98.5 2.8E-09 2E-13 84.9 -3.3 44 108-151 62-105 (162)
38 d1koha1 c.10.2.3 (A:201-362) m 98.4 1.1E-09 7.7E-14 87.4 -6.3 40 62-101 64-105 (162)
39 d1pgva_ c.10.1.1 (A:) Tropomod 98.0 1.9E-06 1.4E-10 68.2 3.9 109 39-149 15-143 (167)
40 d1pgva_ c.10.1.1 (A:) Tropomod 97.9 1.4E-06 1E-10 69.1 2.1 90 61-150 13-113 (167)
41 d1io0a_ c.10.1.1 (A:) Tropomod 97.3 1.4E-05 1E-09 62.9 -0.4 64 60-123 14-86 (166)
42 d1io0a_ c.10.1.1 (A:) Tropomod 97.2 5.7E-05 4.2E-09 59.2 2.0 115 5-123 15-144 (166)
No 1
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.97 E-value=3.9e-31 Score=239.27 Aligned_cols=255 Identities=25% Similarity=0.396 Sum_probs=191.3
Q ss_pred cccEEEccCCCCCCc--CCCCCCCCcEEECCCCCCCCEEEccC-CcCcccCCcCccCCCCcCEEEccCCcCccCCCccCc
Q 017800 8 TLYYLDLSNNFLTNI--EYFPPTNMTQLNFDSNLTHKVLDMRM-NNFNGKIPRKFVKSCNLTSLNLNGNRLEGPLPPSLV 84 (365)
Q Consensus 8 ~L~~L~Ls~N~l~~~--~~~~~~~L~~L~ls~N~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~ 84 (365)
.++.|||++|.+++. +|..+.+|+.| ++|+|++ |+++|.+|.+|+++++|++|+|++|++.+..+..+.
T Consensus 51 ~v~~L~L~~~~l~g~~~lp~~l~~L~~L--------~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~ 122 (313)
T d1ogqa_ 51 RVNNLDLSGLNLPKPYPIPSSLANLPYL--------NFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLS 122 (313)
T ss_dssp CEEEEEEECCCCSSCEECCGGGGGCTTC--------SEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGG
T ss_pred EEEEEECCCCCCCCCCCCChHHhcCccc--------cccccccccccccccccccccccccchhhhcccccccccccccc
Confidence 589999999999984 44444444443 8889986 889999999999999999999999999998998899
Q ss_pred CCCCCCEEEccCCcCCCCCChhhcCCCCCcEEEeeccccccccCCCCCccCCCCc-cEEEcCCCcccCccchhhhhhhhh
Q 017800 85 NCHHLEVLNVGNNQINDNFPNWLEILPELQVLILRSNRFWGPIGENTTIVPFPSL-RIIDLSHNEFTGVLLTGYLDNFKA 163 (365)
Q Consensus 85 ~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L-~~L~ls~N~l~~~~~~~~~~~l~~ 163 (365)
.+..|+++++++|.+.+.+|..+..++.|+.+++++|.+.+.+|..+ ..+..+ +.+++++|.+++..|.. +..+..
T Consensus 123 ~~~~L~~l~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~ip~~~--~~l~~l~~~l~~~~n~l~~~~~~~-~~~l~~ 199 (313)
T d1ogqa_ 123 QIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSY--GSFSKLFTSMTISRNRLTGKIPPT-FANLNL 199 (313)
T ss_dssp GCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGG--GCCCTTCCEEECCSSEEEEECCGG-GGGCCC
T ss_pred chhhhcccccccccccccCchhhccCcccceeecccccccccccccc--cccccccccccccccccccccccc-cccccc
Confidence 99999999999999999999999999999999999999999998876 666665 88999999999887765 554433
Q ss_pred hcccCCCcccccccC--CCCCCCccceEEEEEeccccchh--hhhhheeeEEcCCCccccCCChhhhcccccccccCcCC
Q 017800 164 MMHGNNISVEVDYMT--PLNSSNYYESIILTIKGIDIKME--RILTIFMTIDLSSNKFQGGIPEVVGKLNLLKGLNISHN 239 (365)
Q Consensus 164 L~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~--~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 239 (365)
.. +........... .......+..+....+.+....+ ..+++|+.|||++|+++|.+|+.++++++|+
T Consensus 200 ~~-l~l~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~~~~~~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~------- 271 (313)
T d1ogqa_ 200 AF-VDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLH------- 271 (313)
T ss_dssp SE-EECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCC-------
T ss_pred cc-cccccccccccccccccccccccccccccccccccccccccccccccccCccCeecccCChHHhCCCCCC-------
Confidence 32 111111000000 00011223333333333332222 2367888888888888888888888888777
Q ss_pred CccEEECccCccccCCCCCCCCCCCCCCccCCCCCCCCcCCCCCCC
Q 017800 240 NLTVLNLSYNQFEGPIPRGSQFNTFPNDSYVGNSGLCGFPLLESCN 285 (365)
Q Consensus 240 ~L~~L~ls~N~l~g~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~c~ 285 (365)
+|||++|+|+|.+|....+..+...++.||+.+||.|++ .|.
T Consensus 272 ---~L~Ls~N~l~g~iP~~~~L~~L~~l~l~~N~~l~g~plp-~c~ 313 (313)
T d1ogqa_ 272 ---SLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSPLP-ACT 313 (313)
T ss_dssp ---EEECCSSEEEEECCCSTTGGGSCGGGTCSSSEEESTTSS-CCC
T ss_pred ---EEECcCCcccccCCCcccCCCCCHHHhCCCccccCCCCC-CCC
Confidence 556677778899998888888999999999999999875 563
No 2
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.91 E-value=8.7e-24 Score=187.91 Aligned_cols=190 Identities=22% Similarity=0.172 Sum_probs=113.5
Q ss_pred CcccEEEccCCCCCCcCC---CCCCCCcEEECCCC-------------CCCCEEEcc-CCcCcccCCcCccCCCCcCEEE
Q 017800 7 ATLYYLDLSNNFLTNIEY---FPPTNMTQLNFDSN-------------LTHKVLDMR-MNNFNGKIPRKFVKSCNLTSLN 69 (365)
Q Consensus 7 ~~L~~L~Ls~N~l~~~~~---~~~~~L~~L~ls~N-------------~~L~~L~Ls-~N~l~~~~p~~~~~l~~L~~L~ 69 (365)
+++++|+|++|+|+++.+ ..+++|++|++++| ..++.++.. .|.++...|.+|.++++|++|+
T Consensus 32 ~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~l~~L~~L~ 111 (284)
T d1ozna_ 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH 111 (284)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEECcCCcCCCCCHHHhhccccccccccccccccccccccccccccccccccccccccccccchhhcccccCCEEe
Confidence 356778888888877666 34455666655555 344444432 3344444455555555555555
Q ss_pred ccCCcCccCCCccCcCCCCCCEEEccCCcCCCCCChhhcCCCCCcEEEeeccccccccCCCCCccCCCCccEEEcCCCcc
Q 017800 70 LNGNRLEGPLPPSLVNCHHLEVLNVGNNQINDNFPNWLEILPELQVLILRSNRFWGPIGENTTIVPFPSLRIIDLSHNEF 149 (365)
Q Consensus 70 L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~ls~N~l 149 (365)
+++|.+....+..+..+++|+.+++++|++++..+..|..+++|+.|++++|++.+..+..+ ..+++|+.+++++|.+
T Consensus 112 l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l~~~~f--~~l~~L~~l~l~~N~l 189 (284)
T d1ozna_ 112 LDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAF--RGLHSLDRLLLHQNRV 189 (284)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTT--TTCTTCCEEECCSSCC
T ss_pred cCCcccccccccccchhcccchhhhccccccccChhHhccccchhhcccccCcccccchhhh--ccccccchhhhhhccc
Confidence 55555554444455555555555555555555444555555555555555555554444433 5555555555555555
Q ss_pred cCccchhhhhhhhhhcccCCCcccccccCCCCCCCccceEEEEEeccccchhhhhhheeeEEcCCCccccCCChhhhccc
Q 017800 150 TGVLLTGYLDNFKAMMHGNNISVEVDYMTPLNSSNYYESIILTIKGIDIKMERILTIFMTIDLSSNKFQGGIPEVVGKLN 229 (365)
Q Consensus 150 ~~~~~~~~~~~l~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~ 229 (365)
++..|.. +. .+++|++||+++|++++..|..|+.++
T Consensus 190 ~~i~~~~-f~-------------------------------------------~l~~L~~L~l~~N~i~~~~~~~~~~~~ 225 (284)
T d1ozna_ 190 AHVHPHA-FR-------------------------------------------DLGRLMTLYLFANNLSALPTEALAPLR 225 (284)
T ss_dssp CEECTTT-TT-------------------------------------------TCTTCCEEECCSSCCSCCCHHHHTTCT
T ss_pred cccChhH-hh-------------------------------------------hhhhccccccccccccccccccccccc
Confidence 5444332 22 256678888888888888888888888
Q ss_pred ccccccCcCCCcc
Q 017800 230 LLKGLNISHNNLT 242 (365)
Q Consensus 230 ~L~~L~Ls~N~L~ 242 (365)
+|++|+|++|.++
T Consensus 226 ~L~~L~l~~N~l~ 238 (284)
T d1ozna_ 226 ALQYLRLNDNPWV 238 (284)
T ss_dssp TCCEEECCSSCEE
T ss_pred ccCEEEecCCCCC
Confidence 8887777777655
No 3
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.91 E-value=1e-24 Score=196.71 Aligned_cols=208 Identities=21% Similarity=0.232 Sum_probs=144.6
Q ss_pred cCCcccEEEccC-CCCCCcCC---CCCCCCcEEECCCC-------------CCCCEEEccCCcCcccCCcCccCCCCcCE
Q 017800 5 GIATLYYLDLSN-NFLTNIEY---FPPTNMTQLNFDSN-------------LTHKVLDMRMNNFNGKIPRKFVKSCNLTS 67 (365)
Q Consensus 5 ~l~~L~~L~Ls~-N~l~~~~~---~~~~~L~~L~ls~N-------------~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 67 (365)
++++|++|||++ |+++|.+| ..+++|++|++++| ..|+++++++|.+.+.+|..++.+++++.
T Consensus 74 ~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~N~~~~~~p~~l~~l~~L~~ 153 (313)
T d1ogqa_ 74 NLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVG 153 (313)
T ss_dssp GCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCE
T ss_pred cCccccccccccccccccccccccccccccchhhhccccccccccccccchhhhcccccccccccccCchhhccCcccce
Confidence 689999999997 89998888 56677777777766 56777777777777777777777777777
Q ss_pred EEccCCcCccCCCccCcCCCCC-CEEEccCCcCCCCCChhhcCCCCCcEEEeeccccccccCCCCCccCCCCccEEEcCC
Q 017800 68 LNLNGNRLEGPLPPSLVNCHHL-EVLNVGNNQINDNFPNWLEILPELQVLILRSNRFWGPIGENTTIVPFPSLRIIDLSH 146 (365)
Q Consensus 68 L~L~~N~l~~~~p~~l~~l~~L-~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~ls~ 146 (365)
+++++|.+++.+|..+..+..+ +.+++++|++++..|..+..+..+ .++++++.+.+.+|... ..+++++.+++++
T Consensus 154 l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~~~-~l~l~~~~~~~~~~~~~--~~~~~l~~l~~~~ 230 (313)
T d1ogqa_ 154 ITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLA-FVDLSRNMLEGDASVLF--GSDKNTQKIHLAK 230 (313)
T ss_dssp EECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCS-EEECCSSEEEECCGGGC--CTTSCCSEEECCS
T ss_pred eeccccccccccccccccccccccccccccccccccccccccccccc-ccccccccccccccccc--ccccccccccccc
Confidence 7777777777777766666664 667777777776666666555433 56666666666666554 5666677777777
Q ss_pred CcccCccchhhhhhhhhhcccCCCcccccccCCCCCCCccceEEEEEeccc---cchhhhhhheeeEEcCCCccccCCCh
Q 017800 147 NEFTGVLLTGYLDNFKAMMHGNNISVEVDYMTPLNSSNYYESIILTIKGID---IKMERILTIFMTIDLSSNKFQGGIPE 223 (365)
Q Consensus 147 N~l~~~~~~~~~~~l~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~L~~L~Ls~N~l~~~~p~ 223 (365)
|.+++.+|. ++.++.++.++ ++.+.+. +..+..+++|++|||++|+|+|.+|+
T Consensus 231 ~~l~~~~~~--~~~~~~L~~L~----------------------Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP~ 286 (313)
T d1ogqa_ 231 NSLAFDLGK--VGLSKNLNGLD----------------------LRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ 286 (313)
T ss_dssp SEECCBGGG--CCCCTTCCEEE----------------------CCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCC
T ss_pred ccccccccc--ccccccccccc----------------------CccCeecccCChHHhCCCCCCEEECcCCcccccCCC
Confidence 766665442 34444443332 2323332 23344578999999999999999995
Q ss_pred hhhcccccccccCcCCC
Q 017800 224 VVGKLNLLKGLNISHNN 240 (365)
Q Consensus 224 ~l~~l~~L~~L~Ls~N~ 240 (365)
++.+++|+.+++++|+
T Consensus 287 -~~~L~~L~~l~l~~N~ 302 (313)
T d1ogqa_ 287 -GGNLQRFDVSAYANNK 302 (313)
T ss_dssp -STTGGGSCGGGTCSSS
T ss_pred -cccCCCCCHHHhCCCc
Confidence 6888999988888775
No 4
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.90 E-value=1.2e-22 Score=178.71 Aligned_cols=203 Identities=22% Similarity=0.220 Sum_probs=149.1
Q ss_pred cCCcccEEEccCCCCCCcCCCCCCCCcEEECCCCCCCCEEEccCCcCcccCCcCccCCCCcCEEEccCCcCccCCCccCc
Q 017800 5 GIATLYYLDLSNNFLTNIEYFPPTNMTQLNFDSNLTHKVLDMRMNNFNGKIPRKFVKSCNLTSLNLNGNRLEGPLPPSLV 84 (365)
Q Consensus 5 ~l~~L~~L~Ls~N~l~~~~~~~~~~L~~L~ls~N~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~ 84 (365)
..+.+...|.++++++.+++.-.++ +++|+|++|+|++..+.+|.++++|++|+|++|+|+. +| .++
T Consensus 8 ~~~~~~~v~C~~~~L~~iP~~lp~~-----------l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~-l~-~~~ 74 (266)
T d1p9ag_ 8 KVASHLEVNCDKRNLTALPPDLPKD-----------TTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK-LQ-VDG 74 (266)
T ss_dssp CSTTCCEEECTTSCCSSCCSCCCTT-----------CCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCE-EE-CCS
T ss_pred ccCCCeEEEccCCCCCeeCcCcCcC-----------CCEEECcCCcCCCcCHHHhhccccccccccccccccc-cc-ccc
Confidence 4566777899999999754322223 4777888899987666788999999999999999984 44 457
Q ss_pred CCCCCCEEEccCCcCCCCCChhhcCCCCCcEEEeeccccccccCCCCCccCCCCccEEEcCCCcccCccchhhhhhhhhh
Q 017800 85 NCHHLEVLNVGNNQINDNFPNWLEILPELQVLILRSNRFWGPIGENTTIVPFPSLRIIDLSHNEFTGVLLTGYLDNFKAM 164 (365)
Q Consensus 85 ~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~l~~L 164 (365)
.+++|++|++++|++++ .+..+..+++|++|++++|.+.+..+..+ ..+.+++.|++++|.+++..+.. +..
T Consensus 75 ~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~l~~~~~~~~~~~~~--~~l~~l~~L~l~~n~l~~l~~~~-~~~---- 146 (266)
T d1p9ag_ 75 TLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGAL--RGLGELQELYLKGNELKTLPPGL-LTP---- 146 (266)
T ss_dssp CCTTCCEEECCSSCCSS-CCCCTTTCTTCCEEECCSSCCCCCCSSTT--TTCTTCCEEECTTSCCCCCCTTT-TTT----
T ss_pred ccccccccccccccccc-cccccccccccccccccccccceeecccc--ccccccccccccccccceecccc-ccc----
Confidence 88999999999999987 57778889999999999998876655555 78899999999999888654432 322
Q ss_pred cccCCCcccccccCCCCCCCccceEEEEEeccccchhhhhhheeeEEcCCCccccCCChhhhcccccccccCcCCCccEE
Q 017800 165 MHGNNISVEVDYMTPLNSSNYYESIILTIKGIDIKMERILTIFMTIDLSSNKFQGGIPEVVGKLNLLKGLNISHNNLTVL 244 (365)
Q Consensus 165 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~L~~L 244 (365)
++.++.+++++|++++..++.|+.+++|++|+|++|+|+
T Consensus 147 ---------------------------------------l~~l~~l~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~L~-- 185 (266)
T d1p9ag_ 147 ---------------------------------------TPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-- 185 (266)
T ss_dssp ---------------------------------------CTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC--
T ss_pred ---------------------------------------cccchhcccccccccccCccccccccccceeecccCCCc--
Confidence 355677888888888777777888887776666665555
Q ss_pred ECccCccccCCCCCC-CCCCCCCCccCCCCCCCCc
Q 017800 245 NLSYNQFEGPIPRGS-QFNTFPNDSYVGNSGLCGF 278 (365)
Q Consensus 245 ~ls~N~l~g~~p~~~-~~~~~~~~~~~~n~~lc~~ 278 (365)
.+|.+. ....+....+.|||+.|++
T Consensus 186 ---------~lp~~~~~~~~L~~L~L~~Np~~CdC 211 (266)
T d1p9ag_ 186 ---------TIPKGFFGSHLLPFAFLHGNPWLCNC 211 (266)
T ss_dssp ---------CCCTTTTTTCCCSEEECCSCCBCCSG
T ss_pred ---------ccChhHCCCCCCCEEEecCCCCCCCc
Confidence 233321 2334455566777777765
No 5
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.88 E-value=5.8e-22 Score=174.30 Aligned_cols=178 Identities=25% Similarity=0.190 Sum_probs=147.4
Q ss_pred CcccEEEccCCCCCCcCCCCCCCCcEEECCCCCCCCEEEccCCcCcccCCcCccCCCCcCEEEccCCcCccCCCccCcCC
Q 017800 7 ATLYYLDLSNNFLTNIEYFPPTNMTQLNFDSNLTHKVLDMRMNNFNGKIPRKFVKSCNLTSLNLNGNRLEGPLPPSLVNC 86 (365)
Q Consensus 7 ~~L~~L~Ls~N~l~~~~~~~~~~L~~L~ls~N~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l 86 (365)
+++++|||++|+|+++.+..+.++.. |++|+|++|+|+ .+| .++.+++|++|+|++|+++ ..+..+.++
T Consensus 31 ~~l~~L~Ls~N~i~~l~~~~f~~l~~--------L~~L~L~~N~l~-~l~-~~~~l~~L~~L~Ls~N~l~-~~~~~~~~l 99 (266)
T d1p9ag_ 31 KDTTILHLSENLLYTFSLATLMPYTR--------LTQLNLDRAELT-KLQ-VDGTLPVLGTLDLSHNQLQ-SLPLLGQTL 99 (266)
T ss_dssp TTCCEEECTTSCCSEEEGGGGTTCTT--------CCEEECTTSCCC-EEE-CCSCCTTCCEEECCSSCCS-SCCCCTTTC
T ss_pred cCCCEEECcCCcCCCcCHHHhhcccc--------cccccccccccc-ccc-ccccccccccccccccccc-ccccccccc
Confidence 47999999999999877644444443 388888899888 444 4678999999999999999 467789999
Q ss_pred CCCCEEEccCCcCCCCCChhhcCCCCCcEEEeeccccccccCCCCCccCCCCccEEEcCCCcccCccchhhhhhhhhhcc
Q 017800 87 HHLEVLNVGNNQINDNFPNWLEILPELQVLILRSNRFWGPIGENTTIVPFPSLRIIDLSHNEFTGVLLTGYLDNFKAMMH 166 (365)
Q Consensus 87 ~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~l~~L~~ 166 (365)
++|+.|++++|.+.+..+..+..+.++++|++++|.+.+..+..+ ..+++|+.+++++|.+++..+.. +..
T Consensus 100 ~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~~l~~~~~--~~l~~l~~l~l~~N~l~~~~~~~-~~~------ 170 (266)
T d1p9ag_ 100 PALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLL--TPTPKLEKLSLANNNLTELPAGL-LNG------ 170 (266)
T ss_dssp TTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTT--TTCTTCCEEECTTSCCSCCCTTT-TTT------
T ss_pred cccccccccccccceeeccccccccccccccccccccceeccccc--cccccchhcccccccccccCccc-ccc------
Confidence 999999999999999888888999999999999999986665555 78999999999999999765543 332
Q ss_pred cCCCcccccccCCCCCCCccceEEEEEeccccchhhhhhheeeEEcCCCccccCCChhhhcccccccccCcCCCcc
Q 017800 167 GNNISVEVDYMTPLNSSNYYESIILTIKGIDIKMERILTIFMTIDLSSNKFQGGIPEVVGKLNLLKGLNISHNNLT 242 (365)
Q Consensus 167 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~L~ 242 (365)
+++|++|||++|+|+ .+|+.+..+++|+.|+|++|.+.
T Consensus 171 -------------------------------------l~~L~~L~Ls~N~L~-~lp~~~~~~~~L~~L~L~~Np~~ 208 (266)
T d1p9ag_ 171 -------------------------------------LENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (266)
T ss_dssp -------------------------------------CTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred -------------------------------------ccccceeecccCCCc-ccChhHCCCCCCCEEEecCCCCC
Confidence 567889999999999 88998888888887766666543
No 6
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.88 E-value=1.9e-21 Score=172.61 Aligned_cols=200 Identities=19% Similarity=0.107 Sum_probs=128.7
Q ss_pred cEEEccCCCCCCcCCCCCCCCcEEECCCCCCCCEEEccCCcCcccCCcCccCCCCcCEEEccCCcCccCCCccCcCCCCC
Q 017800 10 YYLDLSNNFLTNIEYFPPTNMTQLNFDSNLTHKVLDMRMNNFNGKIPRKFVKSCNLTSLNLNGNRLEGPLPPSLVNCHHL 89 (365)
Q Consensus 10 ~~L~Ls~N~l~~~~~~~~~~L~~L~ls~N~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L 89 (365)
..++.++++++.++..-.++ +++|+|++|+|+...+.+|.++++|++|++++|++.+..+..+..++.+
T Consensus 14 ~~v~c~~~~L~~iP~~ip~~-----------~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~ 82 (284)
T d1ozna_ 14 VTTSCPQQGLQAVPVGIPAA-----------SQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALL 82 (284)
T ss_dssp CEEECCSSCCSSCCTTCCTT-----------CSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTC
T ss_pred eEEEcCCCCCCccCCCCCCC-----------CCEEECcCCcCCCCCHHHhhccccccccccccccccccccccccccccc
Confidence 34678888887653322233 3666777777775555667777777777777777777666677777777
Q ss_pred CEEEcc-CCcCCCCCChhhcCCCCCcEEEeeccccccccCCCCCccCCCCccEEEcCCCcccCccchhhhhhhhhhcccC
Q 017800 90 EVLNVG-NNQINDNFPNWLEILPELQVLILRSNRFWGPIGENTTIVPFPSLRIIDLSHNEFTGVLLTGYLDNFKAMMHGN 168 (365)
Q Consensus 90 ~~L~L~-~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~l~~L~~l~ 168 (365)
+.++.. .|.++...|..|.++++|++|++++|.+....+..+ ....+|+.+++++|.+++..+.. +..++.|+.++
T Consensus 83 ~~l~~~~~~~~~~l~~~~~~~l~~L~~L~l~~n~~~~~~~~~~--~~~~~L~~l~l~~N~l~~i~~~~-f~~~~~L~~L~ 159 (284)
T d1ozna_ 83 EQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLF--RGLAALQYLYLQDNALQALPDDT-FRDLGNLTHLF 159 (284)
T ss_dssp CEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTT--TTCTTCCEEECCSSCCCCCCTTT-TTTCTTCCEEE
T ss_pred cccccccccccccccchhhcccccCCEEecCCccccccccccc--chhcccchhhhccccccccChhH-hccccchhhcc
Confidence 777654 555666556677777777777777777755444444 56677777777777777554432 44444444333
Q ss_pred CCcccccccCCCCCCCccceEEEEEeccccchhhhhhheeeEEcCCCccccCCChhhhcccccccccCcCCCcc
Q 017800 169 NISVEVDYMTPLNSSNYYESIILTIKGIDIKMERILTIFMTIDLSSNKFQGGIPEVVGKLNLLKGLNISHNNLT 242 (365)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~L~ 242 (365)
+... ....+....+..+++|+.+++++|++++..|..|..+++|++|++++|+++
T Consensus 160 l~~N-------------------~l~~l~~~~f~~l~~L~~l~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~i~ 214 (284)
T d1ozna_ 160 LHGN-------------------RISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLS 214 (284)
T ss_dssp CCSS-------------------CCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCS
T ss_pred cccC-------------------cccccchhhhccccccchhhhhhccccccChhHhhhhhhcccccccccccc
Confidence 2110 011122233444677888888888888888888888888887776666655
No 7
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.86 E-value=4.6e-21 Score=176.79 Aligned_cols=253 Identities=22% Similarity=0.227 Sum_probs=163.8
Q ss_pred cCCcccEEEccCCCCCCcCC-CCCCCCcEEECCCC-----------CCCCEEEccCCcCcccCCcCccCCCCcCEEEccC
Q 017800 5 GIATLYYLDLSNNFLTNIEY-FPPTNMTQLNFDSN-----------LTHKVLDMRMNNFNGKIPRKFVKSCNLTSLNLNG 72 (365)
Q Consensus 5 ~l~~L~~L~Ls~N~l~~~~~-~~~~~L~~L~ls~N-----------~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 72 (365)
++.+|++|+++++.++.+.. ..+++|++|++++| ++|++|++++|.+.+.. .++.+++|+.|++++
T Consensus 42 ~l~~l~~L~l~~~~I~~l~gl~~L~nL~~L~Ls~N~l~~l~~l~~L~~L~~L~L~~n~i~~i~--~l~~l~~L~~L~~~~ 119 (384)
T d2omza2 42 DLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADIT--PLANLTNLTGLTLFN 119 (384)
T ss_dssp HHTTCCEEECCSSCCCCCTTGGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCCG--GGTTCTTCCEEECCS
T ss_pred HhCCCCEEECCCCCCCCccccccCCCCCEEeCcCCcCCCCccccCCccccccccccccccccc--ccccccccccccccc
Confidence 45678888888888876543 66788888888887 67888888888887533 277888888888887
Q ss_pred CcCccCC---------------------------------------------------------------CccCcCCCCC
Q 017800 73 NRLEGPL---------------------------------------------------------------PPSLVNCHHL 89 (365)
Q Consensus 73 N~l~~~~---------------------------------------------------------------p~~l~~l~~L 89 (365)
|.+++.. +..+..++++
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 199 (384)
T d2omza2 120 NQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNL 199 (384)
T ss_dssp SCCCCCGGGTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCCGGGGGCTTC
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccchhhhhcccccccccccccccccccccccccccc
Confidence 7765321 1123445677
Q ss_pred CEEEccCCcCCCCCChhhcCCCCCcEEEeeccccccccCCCCCccCCCCccEEEcCCCcccCccchhhhhhhhhhcccCC
Q 017800 90 EVLNVGNNQINDNFPNWLEILPELQVLILRSNRFWGPIGENTTIVPFPSLRIIDLSHNEFTGVLLTGYLDNFKAMMHGNN 169 (365)
Q Consensus 90 ~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~l~~L~~l~~ 169 (365)
+.+++++|.+++..| +..+++|+.|++++|.++.. + .+ ..+++|+.|++++|.+++..+ +..++.|+.+..
T Consensus 200 ~~l~l~~n~i~~~~~--~~~~~~L~~L~l~~n~l~~~-~-~l--~~l~~L~~L~l~~n~l~~~~~---~~~~~~L~~L~l 270 (384)
T d2omza2 200 ESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI-G-TL--ASLTNLTDLDLANNQISNLAP---LSGLTKLTELKL 270 (384)
T ss_dssp SEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC-G-GG--GGCTTCSEEECCSSCCCCCGG---GTTCTTCSEEEC
T ss_pred ceeeccCCccCCCCc--ccccCCCCEEECCCCCCCCc-c-hh--hcccccchhccccCccCCCCc---ccccccCCEeec
Confidence 888888888877433 45567888888888877542 2 23 667888888888888877654 444555554443
Q ss_pred CcccccccCCCCCCCccceEEEEEeccc-cchhhhhhheeeEEcCCCccccCCChhhhcccccccccCcCCCcc------
Q 017800 170 ISVEVDYMTPLNSSNYYESIILTIKGID-IKMERILTIFMTIDLSSNKFQGGIPEVVGKLNLLKGLNISHNNLT------ 242 (365)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~L~------ 242 (365)
.......+...........+....+.+. ......+..++.|++++|++++.. .+..+++|++|++++|+|+
T Consensus 271 ~~~~l~~~~~~~~~~~l~~l~~~~n~l~~~~~~~~~~~l~~L~ls~n~l~~l~--~l~~l~~L~~L~L~~n~l~~l~~l~ 348 (384)
T d2omza2 271 GANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRLFFANNKVSDVSSLA 348 (384)
T ss_dssp CSSCCCCCGGGTTCTTCSEEECCSSCCSCCGGGGGCTTCSEEECCSSCCSCCG--GGGGCTTCCEEECCSSCCCCCGGGG
T ss_pred cCcccCCCCccccccccccccccccccccccccchhcccCeEECCCCCCCCCc--ccccCCCCCEEECCCCCCCCChhHc
Confidence 2211111111111222233333333322 123445788999999999998643 3788999999999999876
Q ss_pred ------EEECccCccccCCCCCCCCCCCCCCccCC
Q 017800 243 ------VLNLSYNQFEGPIPRGSQFNTFPNDSYVG 271 (365)
Q Consensus 243 ------~L~ls~N~l~g~~p~~~~~~~~~~~~~~~ 271 (365)
+|++++|++++..| -..+..+......+
T Consensus 349 ~l~~L~~L~l~~N~l~~l~~-l~~l~~L~~L~L~~ 382 (384)
T d2omza2 349 NLTNINWLSAGHNQISDLTP-LANLTRITQLGLND 382 (384)
T ss_dssp GCTTCCEEECCSSCCCBCGG-GTTCTTCSEEECCC
T ss_pred CCCCCCEEECCCCcCCCChh-hccCCCCCEeeCCC
Confidence 89999999987655 22333444333333
No 8
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.85 E-value=1.5e-20 Score=173.27 Aligned_cols=225 Identities=21% Similarity=0.241 Sum_probs=166.4
Q ss_pred cCCcccEEEccCCCCCCcCC-CCCCCCcEEECCCC-----------CCCCEEEccCCcCcccCC----------------
Q 017800 5 GIATLYYLDLSNNFLTNIEY-FPPTNMTQLNFDSN-----------LTHKVLDMRMNNFNGKIP---------------- 56 (365)
Q Consensus 5 ~l~~L~~L~Ls~N~l~~~~~-~~~~~L~~L~ls~N-----------~~L~~L~Ls~N~l~~~~p---------------- 56 (365)
.+++|++||+++|+|+++.+ ..+++|++|++++| ++|+.|++++|.+++..+
T Consensus 64 ~L~nL~~L~Ls~N~l~~l~~l~~L~~L~~L~L~~n~i~~i~~l~~l~~L~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (384)
T d2omza2 64 YLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNT 143 (384)
T ss_dssp GCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCCGGGTTCTTCSEEEEEEEE
T ss_pred cCCCCCEEeCcCCcCCCCccccCCcccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 57899999999999999877 88999999999998 789999998887763211
Q ss_pred -----------------------------------------------cCccCCCCcCEEEccCCcCccCCCccCcCCCCC
Q 017800 57 -----------------------------------------------RKFVKSCNLTSLNLNGNRLEGPLPPSLVNCHHL 89 (365)
Q Consensus 57 -----------------------------------------------~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L 89 (365)
..+..+++++.+++++|.+++..| +..+++|
T Consensus 144 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~l~~n~i~~~~~--~~~~~~L 221 (384)
T d2omza2 144 ISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITP--LGILTNL 221 (384)
T ss_dssp ECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCCCGG--GGGCTTC
T ss_pred ccccccccccccccccccccccchhhhhccccccccccccccccccccccccccccceeeccCCccCCCCc--ccccCCC
Confidence 224456789999999999996544 4667899
Q ss_pred CEEEccCCcCCCCCChhhcCCCCCcEEEeeccccccccCCCCCccCCCCccEEEcCCCcccCccchhhhhhhhhhcccCC
Q 017800 90 EVLNVGNNQINDNFPNWLEILPELQVLILRSNRFWGPIGENTTIVPFPSLRIIDLSHNEFTGVLLTGYLDNFKAMMHGNN 169 (365)
Q Consensus 90 ~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~l~~L~~l~~ 169 (365)
++|++++|++++ + ..+..+++|+.|++++|.+++..+ + ..+++|+.|++++|.+++..+ +..+..+..+..
T Consensus 222 ~~L~l~~n~l~~-~-~~l~~l~~L~~L~l~~n~l~~~~~--~--~~~~~L~~L~l~~~~l~~~~~---~~~~~~l~~l~~ 292 (384)
T d2omza2 222 DELSLNGNQLKD-I-GTLASLTNLTDLDLANNQISNLAP--L--SGLTKLTELKLGANQISNISP---LAGLTALTNLEL 292 (384)
T ss_dssp CEEECCSSCCCC-C-GGGGGCTTCSEEECCSSCCCCCGG--G--TTCTTCSEEECCSSCCCCCGG---GTTCTTCSEEEC
T ss_pred CEEECCCCCCCC-c-chhhcccccchhccccCccCCCCc--c--cccccCCEeeccCcccCCCCc---cccccccccccc
Confidence 999999999987 3 467889999999999999976544 2 678999999999999987644 344444433332
Q ss_pred CcccccccCCCCCCCccceEEEEEeccccc-hhhhhhheeeEEcCCCccccCCChhhhcccccccccCcCCCcc
Q 017800 170 ISVEVDYMTPLNSSNYYESIILTIKGIDIK-MERILTIFMTIDLSSNKFQGGIPEVVGKLNLLKGLNISHNNLT 242 (365)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~L~ 242 (365)
.......+........+..+.+..+.+... .+..+++|+.|++++|+|++ ++ .++.+++|++|++++|+|+
T Consensus 293 ~~n~l~~~~~~~~~~~l~~L~ls~n~l~~l~~l~~l~~L~~L~L~~n~l~~-l~-~l~~l~~L~~L~l~~N~l~ 364 (384)
T d2omza2 293 NENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFANNKVSD-VS-SLANLTNINWLSAGHNQIS 364 (384)
T ss_dssp CSSCCSCCGGGGGCTTCSEEECCSSCCSCCGGGGGCTTCCEEECCSSCCCC-CG-GGGGCTTCCEEECCSSCCC
T ss_pred cccccccccccchhcccCeEECCCCCCCCCcccccCCCCCEEECCCCCCCC-Ch-hHcCCCCCCEEECCCCcCC
Confidence 111111111122223344555555544432 24568899999999999984 44 6899999999999999987
No 9
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.85 E-value=3.6e-20 Score=165.87 Aligned_cols=197 Identities=18% Similarity=0.225 Sum_probs=100.2
Q ss_pred CCCCEEEccCCcCcccCCcCccCCCCcCEEEccCCcCccCCCccCcCCCCCCEEEccCCcCCCCCChhhcCCCCCcEEEe
Q 017800 39 LTHKVLDMRMNNFNGKIPRKFVKSCNLTSLNLNGNRLEGPLPPSLVNCHHLEVLNVGNNQINDNFPNWLEILPELQVLIL 118 (365)
Q Consensus 39 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L 118 (365)
++|++|++++|.+....|..|..+++|++|++++|+++ .+|..+ ...++.|++.+|.+.+..+..+.....++.++.
T Consensus 55 ~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~n~l~-~l~~~~--~~~l~~L~~~~n~l~~l~~~~~~~~~~~~~l~~ 131 (305)
T d1xkua_ 55 KNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKM--PKTLQELRVHENEITKVRKSVFNGLNQMIVVEL 131 (305)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSC--CTTCCEEECCSSCCCBBCHHHHTTCTTCCEEEC
T ss_pred ccccccccccccccccchhhhhCCCccCEecccCCccC-cCccch--hhhhhhhhccccchhhhhhhhhhcccccccccc
Confidence 34466677777776555666777777777777777766 344332 245666666666666544444445555555555
Q ss_pred eccccccccCCCCCccCCCCccEEEcCCCcccCccchhhhhhhhhhcccCCCccccccc--CCCCCCCccceEEEEEe--
Q 017800 119 RSNRFWGPIGENTTIVPFPSLRIIDLSHNEFTGVLLTGYLDNFKAMMHGNNISVEVDYM--TPLNSSNYYESIILTIK-- 194 (365)
Q Consensus 119 ~~N~l~~~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~l~~L~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~-- 194 (365)
..|...........+..+++|+.+++++|.++.. |.....+++.| +......... ........+..+....+
T Consensus 132 ~~n~~~~~~~~~~~~~~l~~L~~l~l~~n~l~~l-~~~~~~~L~~L---~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l 207 (305)
T d1xkua_ 132 GTNPLKSSGIENGAFQGMKKLSYIRIADTNITTI-PQGLPPSLTEL---HLDGNKITKVDAASLKGLNNLAKLGLSFNSI 207 (305)
T ss_dssp CSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSC-CSSCCTTCSEE---ECTTSCCCEECTGGGTTCTTCCEEECCSSCC
T ss_pred ccccccccCCCccccccccccCccccccCCcccc-CcccCCccCEE---ECCCCcCCCCChhHhhccccccccccccccc
Confidence 5554322221112235556666666666665532 32222222222 1100000000 00000111222222222
Q ss_pred -ccccchhhhhhheeeEEcCCCccccCCChhhhcccccccccCcCCCccE
Q 017800 195 -GIDIKMERILTIFMTIDLSSNKFQGGIPEVVGKLNLLKGLNISHNNLTV 243 (365)
Q Consensus 195 -~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~L~~ 243 (365)
.+....+..+++|++|+|++|+|+ .+|+++..+++|++|+|++|+|+.
T Consensus 208 ~~~~~~~~~~l~~L~~L~L~~N~L~-~lp~~l~~l~~L~~L~Ls~N~i~~ 256 (305)
T d1xkua_ 208 SAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISA 256 (305)
T ss_dssp CEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCC
T ss_pred cccccccccccccceeeeccccccc-ccccccccccCCCEEECCCCccCc
Confidence 222334445667777777777776 556677777777777766666663
No 10
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.83 E-value=5.6e-20 Score=164.59 Aligned_cols=192 Identities=18% Similarity=0.131 Sum_probs=113.1
Q ss_pred CcccEEEccCCCCCCcCC---CCCCCCcEEECCCC-------------CCCCEEEccCCcCcccCCcCccCCCCcCEEEc
Q 017800 7 ATLYYLDLSNNFLTNIEY---FPPTNMTQLNFDSN-------------LTHKVLDMRMNNFNGKIPRKFVKSCNLTSLNL 70 (365)
Q Consensus 7 ~~L~~L~Ls~N~l~~~~~---~~~~~L~~L~ls~N-------------~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 70 (365)
+++++|+|++|+|+.+.+ ..+++|++|++++| +.|++|++++|+++ .+|..+ ...++.|++
T Consensus 31 ~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~n~l~-~l~~~~--~~~l~~L~~ 107 (305)
T d1xkua_ 31 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKM--PKTLQELRV 107 (305)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSC--CTTCCEEEC
T ss_pred CCCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhhhCCCccCEecccCCccC-cCccch--hhhhhhhhc
Confidence 678999999999998876 56789999999988 78899999999998 455543 346778888
Q ss_pred cCCcCccCCCccCcCCCCCCEEEccCCcCCC--CCChhhcCCCC---------------------CcEEEeecccccccc
Q 017800 71 NGNRLEGPLPPSLVNCHHLEVLNVGNNQIND--NFPNWLEILPE---------------------LQVLILRSNRFWGPI 127 (365)
Q Consensus 71 ~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~--~~p~~l~~l~~---------------------L~~L~L~~N~l~~~~ 127 (365)
.+|.+.+..+..+.....++.++...|.... ..+..+..+++ |+.|++++|...+..
T Consensus 108 ~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l~~L~~l~l~~n~l~~l~~~~~~~L~~L~l~~n~~~~~~ 187 (305)
T d1xkua_ 108 HENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGLPPSLTELHLDGNKITKVD 187 (305)
T ss_dssp CSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSCCSSCCTTCSEEECTTSCCCEEC
T ss_pred cccchhhhhhhhhhccccccccccccccccccCCCccccccccccCccccccCCccccCcccCCccCEEECCCCcCCCCC
Confidence 8887775443334444444444444443221 12223344444 444444444444443
Q ss_pred CCCCCccCCCCccEEEcCCCcccCccchhhhhhhhhhcccCCCcccccccCCCCCCCccceEEEEEeccc--cchhhhhh
Q 017800 128 GENTTIVPFPSLRIIDLSHNEFTGVLLTGYLDNFKAMMHGNNISVEVDYMTPLNSSNYYESIILTIKGID--IKMERILT 205 (365)
Q Consensus 128 ~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~l~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~ 205 (365)
+..+ ..++.++.|++++|.+++..+. .+..++.|+.+ .+..+.+. +..+..++
T Consensus 188 ~~~~--~~~~~l~~L~~s~n~l~~~~~~-~~~~l~~L~~L----------------------~L~~N~L~~lp~~l~~l~ 242 (305)
T d1xkua_ 188 AASL--KGLNNLAKLGLSFNSISAVDNG-SLANTPHLREL----------------------HLNNNKLVKVPGGLADHK 242 (305)
T ss_dssp TGGG--TTCTTCCEEECCSSCCCEECTT-TGGGSTTCCEE----------------------ECCSSCCSSCCTTTTTCS
T ss_pred hhHh--hccccccccccccccccccccc-cccccccceee----------------------eccccccccccccccccc
Confidence 3333 4444445555555544443332 23444444333 33322221 12234478
Q ss_pred heeeEEcCCCccccCCChhhh
Q 017800 206 IFMTIDLSSNKFQGGIPEVVG 226 (365)
Q Consensus 206 ~L~~L~Ls~N~l~~~~p~~l~ 226 (365)
+|+.|+|++|+|+......|.
T Consensus 243 ~L~~L~Ls~N~i~~i~~~~f~ 263 (305)
T d1xkua_ 243 YIQVVYLHNNNISAIGSNDFC 263 (305)
T ss_dssp SCCEEECCSSCCCCCCTTSSS
T ss_pred CCCEEECCCCccCccChhhcc
Confidence 999999999999955444443
No 11
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.81 E-value=2.2e-19 Score=149.68 Aligned_cols=133 Identities=22% Similarity=0.204 Sum_probs=112.3
Q ss_pred ccEEEccCCCCCCcCCCCCCCCcEEECCCCCCCCEEEccCCcCcccC-CcCccCCCCcCEEEccCCcCccCCCccCcCCC
Q 017800 9 LYYLDLSNNFLTNIEYFPPTNMTQLNFDSNLTHKVLDMRMNNFNGKI-PRKFVKSCNLTSLNLNGNRLEGPLPPSLVNCH 87 (365)
Q Consensus 9 L~~L~Ls~N~l~~~~~~~~~~L~~L~ls~N~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 87 (365)
.+.++.++++++.++..-.+ ++++|+|++|+|++.+ +..|..+++|+.|+|++|++.+..+..+..++
T Consensus 10 ~~~v~Cs~~~L~~iP~~lp~-----------~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~ 78 (192)
T d1w8aa_ 10 GTTVDCTGRGLKEIPRDIPL-----------HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGAS 78 (192)
T ss_dssp TTEEECTTSCCSSCCSCCCT-----------TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCT
T ss_pred CCEEEEeCCCcCccCCCCCC-----------CCCEEEeCCCCCcccccccccCCCceEeeeecccccccccccccccccc
Confidence 46789999999876543222 3477899999998644 56788999999999999999988899999999
Q ss_pred CCCEEEccCCcCCCCCChhhcCCCCCcEEEeeccccccccCCCCCccCCCCccEEEcCCCcccCccc
Q 017800 88 HLEVLNVGNNQINDNFPNWLEILPELQVLILRSNRFWGPIGENTTIVPFPSLRIIDLSHNEFTGVLL 154 (365)
Q Consensus 88 ~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~ls~N~l~~~~~ 154 (365)
+|++|+|++|+++...|.+|.++++|++|+|++|+|++..+..+ ..+++|++|+|++|.+.....
T Consensus 79 ~L~~L~Ls~N~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f--~~l~~L~~l~L~~N~~~~~~~ 143 (192)
T d1w8aa_ 79 HIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSF--EHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp TCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSS--TTCTTCCEEECTTCCBCCSGG
T ss_pred ccceeeeccccccccCHHHHhCCCcccccccCCccccccCHHHh--cCCcccccccccccccccccc
Confidence 99999999999999888889999999999999999987777766 889999999999999876543
No 12
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.77 E-value=1.1e-18 Score=145.31 Aligned_cols=110 Identities=24% Similarity=0.237 Sum_probs=92.2
Q ss_pred CCEEEccCCcCcccCCcCccCCCCcCEEEccCCcCccCC-CccCcCCCCCCEEEccCCcCCCCCChhhcCCCCCcEEEee
Q 017800 41 HKVLDMRMNNFNGKIPRKFVKSCNLTSLNLNGNRLEGPL-PPSLVNCHHLEVLNVGNNQINDNFPNWLEILPELQVLILR 119 (365)
Q Consensus 41 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~ 119 (365)
.+.++.++++++ .+|..+. +++++|+|++|+|++.+ +..|.++++|++|++++|.+....+..+..+++|++|+++
T Consensus 10 ~~~v~Cs~~~L~-~iP~~lp--~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls 86 (192)
T d1w8aa_ 10 GTTVDCTGRGLK-EIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLG 86 (192)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CCEEEEeCCCcC-ccCCCCC--CCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeec
Confidence 367889999998 6777653 68999999999998644 5667889999999999999998888889999999999999
Q ss_pred ccccccccCCCCCccCCCCccEEEcCCCcccCccch
Q 017800 120 SNRFWGPIGENTTIVPFPSLRIIDLSHNEFTGVLLT 155 (365)
Q Consensus 120 ~N~l~~~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~ 155 (365)
+|++++..+..| .++++|++|+|++|.|++..+.
T Consensus 87 ~N~l~~l~~~~F--~~l~~L~~L~L~~N~l~~i~~~ 120 (192)
T d1w8aa_ 87 ENKIKEISNKMF--LGLHQLKTLNLYDNQISCVMPG 120 (192)
T ss_dssp SCCCCEECSSSS--TTCTTCCEEECCSSCCCEECTT
T ss_pred cccccccCHHHH--hCCCcccccccCCccccccCHH
Confidence 999987766665 8899999999999999876554
No 13
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.76 E-value=4.6e-19 Score=149.91 Aligned_cols=165 Identities=22% Similarity=0.266 Sum_probs=107.4
Q ss_pred CCcccEEEccCCCCCCcCCCCCCCCcEEECCCCCCCCEEEccCCcCcccCCcCccCCCCcCEEEccCCcCccCCCccCcC
Q 017800 6 IATLYYLDLSNNFLTNIEYFPPTNMTQLNFDSNLTHKVLDMRMNNFNGKIPRKFVKSCNLTSLNLNGNRLEGPLPPSLVN 85 (365)
Q Consensus 6 l~~L~~L~Ls~N~l~~~~~~~~~~L~~L~ls~N~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~ 85 (365)
+.+|+.|++++|.++...+ ++ +.++|++|++++|++++. + .++.+++|++|++++|++++ +| .+.+
T Consensus 45 L~~L~~L~l~~~~i~~l~~-----l~-----~l~~L~~L~L~~n~i~~l-~-~~~~l~~L~~L~l~~n~i~~-l~-~l~~ 110 (210)
T d1h6ta2 45 LNSIDQIIANNSDIKSVQG-----IQ-----YLPNVTKLFLNGNKLTDI-K-PLANLKNLGWLFLDENKVKD-LS-SLKD 110 (210)
T ss_dssp HHTCCEEECTTSCCCCCTT-----GG-----GCTTCCEEECCSSCCCCC-G-GGTTCTTCCEEECCSSCCCC-GG-GGTT
T ss_pred hcCccEEECcCCCCCCchh-----Hh-----hCCCCCEEeCCCccccCc-c-ccccCccccccccccccccc-cc-cccc
Confidence 3455566666665554322 11 114456677777777743 3 25677778888888777773 44 4677
Q ss_pred CCCCCEEEccCCcCCCCCChhhcCCCCCcEEEeeccccccccCCCCCccCCCCccEEEcCCCcccCccchhhhhhhhhhc
Q 017800 86 CHHLEVLNVGNNQINDNFPNWLEILPELQVLILRSNRFWGPIGENTTIVPFPSLRIIDLSHNEFTGVLLTGYLDNFKAMM 165 (365)
Q Consensus 86 l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~l~~L~ 165 (365)
+++|+.|++++|.+.. + ..+..+++++.+++++|.+++.. .. ..+++|+++++++|++++..+ +.+
T Consensus 111 l~~L~~L~l~~~~~~~-~-~~l~~l~~l~~l~~~~n~l~~~~--~~--~~l~~L~~l~l~~n~l~~i~~---l~~----- 176 (210)
T d1h6ta2 111 LKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDIT--VL--SRLTKLDTLSLEDNQISDIVP---LAG----- 176 (210)
T ss_dssp CTTCCEEECTTSCCCC-C-GGGGGCTTCCEEECCSSCCCCCG--GG--GGCTTCSEEECCSSCCCCCGG---GTT-----
T ss_pred cccccccccccccccc-c-ccccccccccccccccccccccc--cc--ccccccccccccccccccccc---ccC-----
Confidence 7778888887777754 2 35667777788887777775422 12 567777788887777765322 211
Q ss_pred ccCCCcccccccCCCCCCCccceEEEEEeccccchhhhhhheeeEEcCCCccccCCChhhhcccccccccCcC
Q 017800 166 HGNNISVEVDYMTPLNSSNYYESIILTIKGIDIKMERILTIFMTIDLSSNKFQGGIPEVVGKLNLLKGLNISH 238 (365)
Q Consensus 166 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~ 238 (365)
+++|+.|+|++|+|+ .+| .+.++++|++|+|++
T Consensus 177 --------------------------------------l~~L~~L~Ls~N~i~-~l~-~l~~l~~L~~L~Ls~ 209 (210)
T d1h6ta2 177 --------------------------------------LTKLQNLYLSKNHIS-DLR-ALAGLKNLDVLELFS 209 (210)
T ss_dssp --------------------------------------CTTCCEEECCSSCCC-BCG-GGTTCTTCSEEEEEE
T ss_pred --------------------------------------CCCCCEEECCCCCCC-CCh-hhcCCCCCCEEEccC
Confidence 466788899999888 455 588888888888763
No 14
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.75 E-value=1e-17 Score=143.27 Aligned_cols=126 Identities=21% Similarity=0.263 Sum_probs=74.8
Q ss_pred cCCcccEEEccCCCCCCcCC-CCCCCCcEEECCCCCCCCEEEccCCcCcccCCcCccCCCCcCEEEccCCcCccCCCccC
Q 017800 5 GIATLYYLDLSNNFLTNIEY-FPPTNMTQLNFDSNLTHKVLDMRMNNFNGKIPRKFVKSCNLTSLNLNGNRLEGPLPPSL 83 (365)
Q Consensus 5 ~l~~L~~L~Ls~N~l~~~~~-~~~~~L~~L~ls~N~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l 83 (365)
++++|+.|++++|.++...+ ..+++ |++|++++|.+++..| +..+++|+++++++|.++ .++ .+
T Consensus 39 ~l~~L~~L~l~~~~i~~l~~l~~l~~-----------L~~L~ls~n~i~~~~~--l~~l~~l~~l~~~~n~~~-~i~-~l 103 (227)
T d1h6ua2 39 DLDGITTLSAFGTGVTTIEGVQYLNN-----------LIGLELKDNQITDLAP--LKNLTKITELELSGNPLK-NVS-AI 103 (227)
T ss_dssp HHHTCCEEECTTSCCCCCTTGGGCTT-----------CCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCS-CCG-GG
T ss_pred HcCCcCEEECCCCCCCcchhHhcCCC-----------CcEeecCCceeecccc--cccccccccccccccccc-ccc-cc
Confidence 45677888888887776533 33444 4566666666664332 566666777777766666 232 45
Q ss_pred cCCCCCCEEEccCCcCCCCCChhhcCCCCCcEEEeeccccccccCCCCCccCCCCccEEEcCCCcccC
Q 017800 84 VNCHHLEVLNVGNNQINDNFPNWLEILPELQVLILRSNRFWGPIGENTTIVPFPSLRIIDLSHNEFTG 151 (365)
Q Consensus 84 ~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~ls~N~l~~ 151 (365)
.++++|+.++++++...+. ..+...+.++.+.++++.+....+ + ..+++|+.|++++|.+++
T Consensus 104 ~~l~~L~~l~l~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~--~--~~~~~L~~L~l~~n~~~~ 165 (227)
T d1h6ua2 104 AGLQSIKTLDLTSTQITDV--TPLAGLSNLQVLYLDLNQITNISP--L--AGLTNLQYLSIGNAQVSD 165 (227)
T ss_dssp TTCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECCSSCCCCCGG--G--GGCTTCCEEECCSSCCCC
T ss_pred ccccccccccccccccccc--chhccccchhhhhchhhhhchhhh--h--cccccccccccccccccc
Confidence 6666677777766666542 234455666666666666543222 1 455666666666666554
No 15
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.74 E-value=1.8e-18 Score=144.91 Aligned_cols=99 Identities=26% Similarity=0.238 Sum_probs=47.1
Q ss_pred CEEEccCCcCcccCCcCccCCCCcCEEEccCCcCccCCCccCcCCCCCCEEEccCCcCCCCCChhhcCCCCCcEEEeecc
Q 017800 42 KVLDMRMNNFNGKIPRKFVKSCNLTSLNLNGNRLEGPLPPSLVNCHHLEVLNVGNNQINDNFPNWLEILPELQVLILRSN 121 (365)
Q Consensus 42 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N 121 (365)
++|++++|.++. ++ .+..+++|++|++++|++++. + .+.++++|++|++++|.+.. ++ .+..+++|+.|++++|
T Consensus 43 ~~L~l~~~~i~~-l~-~l~~l~nL~~L~Ls~N~l~~~-~-~l~~l~~L~~L~l~~n~~~~-~~-~l~~l~~L~~L~l~~~ 116 (199)
T d2omxa2 43 TTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTDI-T-PLKNLTKLVDILMNNNQIAD-IT-PLANLTNLTGLTLFNN 116 (199)
T ss_dssp CEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCC-G-GGTTCTTCCEEECCSSCCCC-CG-GGTTCTTCSEEECCSS
T ss_pred CEEECCCCCCCC-cc-ccccCCCcCcCccccccccCc-c-cccCCccccccccccccccc-cc-cccccccccccccccc
Confidence 444444444442 21 244455555555555555532 2 14555555555555555543 22 2445555555555555
Q ss_pred ccccccCCCCCccCCCCccEEEcCCCccc
Q 017800 122 RFWGPIGENTTIVPFPSLRIIDLSHNEFT 150 (365)
Q Consensus 122 ~l~~~~~~~~~~~~l~~L~~L~ls~N~l~ 150 (365)
.+....+ + ..+++|+.|++++|.+.
T Consensus 117 ~~~~~~~--~--~~l~~L~~L~l~~n~l~ 141 (199)
T d2omxa2 117 QITDIDP--L--KNLTNLNRLELSSNTIS 141 (199)
T ss_dssp CCCCCGG--G--TTCTTCSEEECCSSCCC
T ss_pred ccccccc--c--chhhhhHHhhhhhhhhc
Confidence 5432211 1 44555555555555544
No 16
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.71 E-value=1.1e-17 Score=143.07 Aligned_cols=187 Identities=16% Similarity=0.148 Sum_probs=132.5
Q ss_pred cccEEEccCCCCCCcCC-CCCCCCcEEECCCCCCCCEEEccCCcCcccCCcCccCCCCcCEEEccCCcCccCCCccCcCC
Q 017800 8 TLYYLDLSNNFLTNIEY-FPPTNMTQLNFDSNLTHKVLDMRMNNFNGKIPRKFVKSCNLTSLNLNGNRLEGPLPPSLVNC 86 (365)
Q Consensus 8 ~L~~L~Ls~N~l~~~~~-~~~~~L~~L~ls~N~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l 86 (365)
++..++++.+++++... ..+ .+|+.|++.+|.++. ++ .+..+++|++|++++|++++.. .+..+
T Consensus 20 ~~~~~~l~~~~~~d~~~~~~l-----------~~L~~L~l~~~~i~~-l~-~l~~l~~L~~L~ls~n~i~~~~--~l~~l 84 (227)
T d1h6ua2 20 NAIKIAAGKSNVTDTVTQADL-----------DGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLA--PLKNL 84 (227)
T ss_dssp HHHHHHTTCSSTTSEECHHHH-----------HTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCG--GGTTC
T ss_pred HHHHHHhCCCCcCCcCCHHHc-----------CCcCEEECCCCCCCc-ch-hHhcCCCCcEeecCCceeeccc--ccccc
Confidence 34445666666666543 222 345788899999984 54 5899999999999999999643 38999
Q ss_pred CCCCEEEccCCcCCCCCChhhcCCCCCcEEEeeccccccccCCCCCccCCCCccEEEcCCCcccCccchhhhhhhhhhcc
Q 017800 87 HHLEVLNVGNNQINDNFPNWLEILPELQVLILRSNRFWGPIGENTTIVPFPSLRIIDLSHNEFTGVLLTGYLDNFKAMMH 166 (365)
Q Consensus 87 ~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~l~~L~~ 166 (365)
++|+++++++|.++. ++ .+..+++|++++++++...+..+ + ...+.++.++++.+.+....+ +...+.++.
T Consensus 85 ~~l~~l~~~~n~~~~-i~-~l~~l~~L~~l~l~~~~~~~~~~--~--~~~~~~~~l~~~~~~~~~~~~---~~~~~~L~~ 155 (227)
T d1h6ua2 85 TKITELELSGNPLKN-VS-AIAGLQSIKTLDLTSTQITDVTP--L--AGLSNLQVLYLDLNQITNISP---LAGLTNLQY 155 (227)
T ss_dssp CSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTTSCCCCCGG--G--TTCTTCCEEECCSSCCCCCGG---GGGCTTCCE
T ss_pred ccccccccccccccc-cc-cccccccccccccccccccccch--h--ccccchhhhhchhhhhchhhh---hcccccccc
Confidence 999999999999986 43 58899999999999998765433 2 567899999999998876543 444444444
Q ss_pred cCCCcccccccCCCCCCCccceEEEEEeccc-cchhhhhhheeeEEcCCCccccCCChhhhcccccccccCcCCCcc
Q 017800 167 GNNISVEVDYMTPLNSSNYYESIILTIKGID-IKMERILTIFMTIDLSSNKFQGGIPEVVGKLNLLKGLNISHNNLT 242 (365)
Q Consensus 167 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~L~ 242 (365)
+.... +.+. ...+..+++|++|||++|++++ ++ .++.+++|++|+|++|+|+
T Consensus 156 L~l~~----------------------n~~~~~~~l~~l~~L~~L~Ls~n~l~~-l~-~l~~l~~L~~L~Ls~N~lt 208 (227)
T d1h6ua2 156 LSIGN----------------------AQVSDLTPLANLSKLTTLKADDNKISD-IS-PLASLPNLIEVHLKNNQIS 208 (227)
T ss_dssp EECCS----------------------SCCCCCGGGTTCTTCCEEECCSSCCCC-CG-GGGGCTTCCEEECTTSCCC
T ss_pred ccccc----------------------cccccchhhcccccceecccCCCccCC-Ch-hhcCCCCCCEEECcCCcCC
Confidence 33311 1110 1112346788899999998884 44 3778888887777777666
No 17
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.70 E-value=1.1e-15 Score=138.37 Aligned_cols=235 Identities=21% Similarity=0.218 Sum_probs=142.3
Q ss_pred cccEEEccCCCCCCcCCCCCCCCcEEECCCC---------CCCCEEEccCCcCcccCCcCccCCCCcCEEEccCCcCccC
Q 017800 8 TLYYLDLSNNFLTNIEYFPPTNMTQLNFDSN---------LTHKVLDMRMNNFNGKIPRKFVKSCNLTSLNLNGNRLEGP 78 (365)
Q Consensus 8 ~L~~L~Ls~N~l~~~~~~~~~~L~~L~ls~N---------~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 78 (365)
++++|||++|.++.+ |..+++|++|++++| .+|+.|++++|.++ .++.. .+.|++|++++|.++ .
T Consensus 39 ~l~~LdLs~~~L~~l-p~~~~~L~~L~Ls~N~l~~lp~~~~~L~~L~l~~n~l~-~l~~l---p~~L~~L~L~~n~l~-~ 112 (353)
T d1jl5a_ 39 QAHELELNNLGLSSL-PELPPHLESLVASCNSLTELPELPQSLKSLLVDNNNLK-ALSDL---PPLLEYLGVSNNQLE-K 112 (353)
T ss_dssp TCSEEECTTSCCSCC-CSCCTTCSEEECCSSCCSSCCCCCTTCCEEECCSSCCS-CCCSC---CTTCCEEECCSSCCS-S
T ss_pred CCCEEEeCCCCCCCC-CCCCCCCCEEECCCCCCcccccchhhhhhhhhhhcccc-hhhhh---ccccccccccccccc-c
Confidence 578889999988864 455678889999888 57888888888887 34431 145888899988888 4
Q ss_pred CCccCcCCCCCCEEEccCCcCCCCCC------------------hhhcCCCCCcEEEeeccccccccCC-----------
Q 017800 79 LPPSLVNCHHLEVLNVGNNQINDNFP------------------NWLEILPELQVLILRSNRFWGPIGE----------- 129 (365)
Q Consensus 79 ~p~~l~~l~~L~~L~L~~N~l~~~~p------------------~~l~~l~~L~~L~L~~N~l~~~~~~----------- 129 (365)
+|. ++.+++|++|++++|.+....+ ..+..++.++.+++++|.+......
T Consensus 113 lp~-~~~l~~L~~L~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~l~~l~~l~~L~l~~n~~~~~~~~~~~~~~l~~~~ 191 (353)
T d1jl5a_ 113 LPE-LQNSSFLKIIDVDNNSLKKLPDLPPSLEFIAAGNNQLEELPELQNLPFLTAIYADNNSLKKLPDLPLSLESIVAGN 191 (353)
T ss_dssp CCC-CTTCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSSCCCCTTCTTCCEEECCSSCCSSCCCCCTTCCEEECCS
T ss_pred ccc-hhhhccceeeccccccccccccccccccchhhccccccccccccccccceeccccccccccccccccccccccccc
Confidence 564 5778888888888887764221 2344567788888888765431110
Q ss_pred -----CCCccCCCCccEEEcCCCcccCccchhhhhhhhhhcccCCCcccccc-cCCC-------------CCC-CccceE
Q 017800 130 -----NTTIVPFPSLRIIDLSHNEFTGVLLTGYLDNFKAMMHGNNISVEVDY-MTPL-------------NSS-NYYESI 189 (365)
Q Consensus 130 -----~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~l~~L~~l~~~~~~~~~-~~~~-------------~~~-~~~~~~ 189 (365)
...+..++.|+.+++++|..... +.. ...+..+............ .... ... ......
T Consensus 192 ~~~~~~~~~~~l~~L~~l~l~~n~~~~~-~~~-~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~~ 269 (353)
T d1jl5a_ 192 NILEELPELQNLPFLTTIYADNNLLKTL-PDL-PPSLEALNVRDNYLTDLPELPQSLTFLDVSENIFSGLSELPPNLYYL 269 (353)
T ss_dssp SCCSSCCCCTTCTTCCEEECCSSCCSSC-CSC-CTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSEESCCCTTCCEE
T ss_pred cccccccccccccccccccccccccccc-ccc-cccccccccccccccccccccccccccccccccccccccccchhccc
Confidence 01135678999999999887643 222 3333322221110000000 0000 000 000001
Q ss_pred EEEEeccccchhhhhhheeeEEcCCCccccCCChhhhcccccccccCcCCCcc----------EEECccCccccCCCC
Q 017800 190 ILTIKGIDIKMERILTIFMTIDLSSNKFQGGIPEVVGKLNLLKGLNISHNNLT----------VLNLSYNQFEGPIPR 257 (365)
Q Consensus 190 ~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~L~----------~L~ls~N~l~g~~p~ 257 (365)
......+ ..++..+++|++|+|++|+|+ .+|. .+++|+.|+|++|+|+ .|++++|+++ .+|.
T Consensus 270 ~~~~~~~-~~~~~~~~~L~~L~Ls~N~l~-~lp~---~~~~L~~L~L~~N~L~~l~~~~~~L~~L~L~~N~L~-~lp~ 341 (353)
T d1jl5a_ 270 NASSNEI-RSLCDLPPSLEELNVSNNKLI-ELPA---LPPRLERLIASFNHLAEVPELPQNLKQLHVEYNPLR-EFPD 341 (353)
T ss_dssp ECCSSCC-SEECCCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCS-SCCC
T ss_pred ccccCcc-ccccccCCCCCEEECCCCccC-cccc---ccCCCCEEECCCCcCCccccccCCCCEEECcCCcCC-CCCc
Confidence 1111111 122233578999999999998 6675 3578888888888766 6777777766 3443
No 18
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.68 E-value=3.4e-16 Score=130.80 Aligned_cols=148 Identities=24% Similarity=0.262 Sum_probs=115.7
Q ss_pred cCCcccEEEccCCCCCCcCC-CCCCCCcEEECCCC-----------CCCCEEEccCCcCcccCCcCccCCCCcCEEEccC
Q 017800 5 GIATLYYLDLSNNFLTNIEY-FPPTNMTQLNFDSN-----------LTHKVLDMRMNNFNGKIPRKFVKSCNLTSLNLNG 72 (365)
Q Consensus 5 ~l~~L~~L~Ls~N~l~~~~~-~~~~~L~~L~ls~N-----------~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 72 (365)
+++++++|++++|.++.+.. ..+++|++|++++| ++|++|++++|.+. .++ .+..+++|+.|++++
T Consensus 38 ~l~~l~~L~l~~~~i~~l~~l~~l~nL~~L~Ls~N~l~~~~~l~~l~~L~~L~l~~n~~~-~~~-~l~~l~~L~~L~l~~ 115 (199)
T d2omxa2 38 DLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIA-DIT-PLANLTNLTGLTLFN 115 (199)
T ss_dssp HHTTCCEEECTTSCCCCCTTGGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCC-CCG-GGTTCTTCSEEECCS
T ss_pred HhcCCCEEECCCCCCCCccccccCCCcCcCccccccccCcccccCCcccccccccccccc-ccc-ccccccccccccccc
Confidence 46789999999999987655 67889999999888 68899999998887 344 378888999999998
Q ss_pred CcCccCCCccCcCCCCCCEEEccCCcCCCCCChhhcCCCCCcEEEeeccccccccCCCCCccCCCCccEEEcCCCcccCc
Q 017800 73 NRLEGPLPPSLVNCHHLEVLNVGNNQINDNFPNWLEILPELQVLILRSNRFWGPIGENTTIVPFPSLRIIDLSHNEFTGV 152 (365)
Q Consensus 73 N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~ls~N~l~~~ 152 (365)
|.+... ..+..+++|+.|++++|++.. + +.+..+++|+.|++.+|++++..+ + .++++|+.|++++|++++.
T Consensus 116 ~~~~~~--~~~~~l~~L~~L~l~~n~l~~-~-~~l~~~~~L~~L~l~~n~l~~l~~--l--~~l~~L~~L~ls~N~i~~i 187 (199)
T d2omxa2 116 NQITDI--DPLKNLTNLNRLELSSNTISD-I-SALSGLTSLQQLNFSSNQVTDLKP--L--ANLTTLERLDISSNKVSDI 187 (199)
T ss_dssp SCCCCC--GGGTTCTTCSEEECCSSCCCC-C-GGGTTCTTCSEEECCSSCCCCCGG--G--TTCTTCCEEECCSSCCCCC
T ss_pred cccccc--cccchhhhhHHhhhhhhhhcc-c-ccccccccccccccccccccCCcc--c--cCCCCCCEEECCCCCCCCC
Confidence 888743 357788899999999998875 3 357888899999999998865432 3 7889999999999988864
Q ss_pred cchhhhhhhhhhc
Q 017800 153 LLTGYLDNFKAMM 165 (365)
Q Consensus 153 ~~~~~~~~l~~L~ 165 (365)
+ . +..+++|+
T Consensus 188 -~-~-l~~L~~L~ 197 (199)
T d2omxa2 188 -S-V-LAKLTNLE 197 (199)
T ss_dssp -G-G-GGGCTTCS
T ss_pred -c-c-ccCCCCCC
Confidence 2 1 45555543
No 19
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.66 E-value=3.8e-16 Score=131.62 Aligned_cols=141 Identities=25% Similarity=0.255 Sum_probs=110.7
Q ss_pred cCCcccEEEccCCCCCCcCC-CCCCCCcEEECCCCCCCCEEEccCCcCcccCCcCccCCCCcCEEEccCCcCccCCCccC
Q 017800 5 GIATLYYLDLSNNFLTNIEY-FPPTNMTQLNFDSNLTHKVLDMRMNNFNGKIPRKFVKSCNLTSLNLNGNRLEGPLPPSL 83 (365)
Q Consensus 5 ~l~~L~~L~Ls~N~l~~~~~-~~~~~L~~L~ls~N~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l 83 (365)
.+++|++|++++|+++++.+ ..++ +|++|++++|++++ +| .+..+++|+.|++++|.+.. + ..+
T Consensus 66 ~l~~L~~L~L~~n~i~~l~~~~~l~-----------~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~l~~~~~~~-~-~~l 130 (210)
T d1h6ta2 66 YLPNVTKLFLNGNKLTDIKPLANLK-----------NLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGL 130 (210)
T ss_dssp GCTTCCEEECCSSCCCCCGGGTTCT-----------TCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCC-C-GGG
T ss_pred hCCCCCEEeCCCccccCccccccCc-----------cccccccccccccc-cc-cccccccccccccccccccc-c-ccc
Confidence 57899999999999998665 3333 34777888888874 44 58889999999999999873 3 468
Q ss_pred cCCCCCCEEEccCCcCCCCCChhhcCCCCCcEEEeeccccccccCCCCCccCCCCccEEEcCCCcccCccchhhhhhhhh
Q 017800 84 VNCHHLEVLNVGNNQINDNFPNWLEILPELQVLILRSNRFWGPIGENTTIVPFPSLRIIDLSHNEFTGVLLTGYLDNFKA 163 (365)
Q Consensus 84 ~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~l~~ 163 (365)
..++.++.+++++|.+++ +..+..+++|+++++++|++++..+ + ..+++|+.|++++|.+++. + . +..+++
T Consensus 131 ~~l~~l~~l~~~~n~l~~--~~~~~~l~~L~~l~l~~n~l~~i~~--l--~~l~~L~~L~Ls~N~i~~l-~-~-l~~l~~ 201 (210)
T d1h6ta2 131 VHLPQLESLYLGNNKITD--ITVLSRLTKLDTLSLEDNQISDIVP--L--AGLTKLQNLYLSKNHISDL-R-A-LAGLKN 201 (210)
T ss_dssp GGCTTCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCCCGG--G--TTCTTCCEEECCSSCCCBC-G-G-GTTCTT
T ss_pred cccccccccccccccccc--ccccccccccccccccccccccccc--c--cCCCCCCEEECCCCCCCCC-h-h-hcCCCC
Confidence 889999999999999976 3457789999999999999875432 3 7899999999999999854 3 2 666666
Q ss_pred hcccCC
Q 017800 164 MMHGNN 169 (365)
Q Consensus 164 L~~l~~ 169 (365)
|+.+++
T Consensus 202 L~~L~L 207 (210)
T d1h6ta2 202 LDVLEL 207 (210)
T ss_dssp CSEEEE
T ss_pred CCEEEc
Confidence 665543
No 20
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.65 E-value=3.8e-16 Score=134.42 Aligned_cols=113 Identities=16% Similarity=0.098 Sum_probs=85.5
Q ss_pred CCCCEEEccCCcCcccC-CcCccCCCCcCEEEcc-CCcCccCCCccCcCCCCCCEEEccCCcCCCCCCh-hhcCCCCCcE
Q 017800 39 LTHKVLDMRMNNFNGKI-PRKFVKSCNLTSLNLN-GNRLEGPLPPSLVNCHHLEVLNVGNNQINDNFPN-WLEILPELQV 115 (365)
Q Consensus 39 ~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~L~-~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~-~l~~l~~L~~ 115 (365)
++|++|++++|.+...+ +.+|..++.++++.+. .|++....+..|.++++|++|++++|.+....+. .+..+..+..
T Consensus 53 ~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~n~l~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~~~~~l~~l~~ 132 (242)
T d1xwdc1 53 GDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLL 132 (242)
T ss_dssp TTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECCTTCCEECTTSEECCTTCCEEEEESCCCCSCCCCTTTCBSSCEEE
T ss_pred chhhhhhhccccccceeeccccccccccccccccccccccccccccccccccccccccchhhhccccccccccccccccc
Confidence 56699999999987654 4578899999999976 4778878888899999999999999999764332 3345566766
Q ss_pred EEeeccccccccCCCCCccCC-CCccEEEcCCCcccCcc
Q 017800 116 LILRSNRFWGPIGENTTIVPF-PSLRIIDLSHNEFTGVL 153 (365)
Q Consensus 116 L~L~~N~l~~~~~~~~~~~~l-~~L~~L~ls~N~l~~~~ 153 (365)
+...++.+....+..+ ..+ ..++.|++++|.++...
T Consensus 133 ~~~~n~~l~~i~~~~~--~~~~~~l~~L~l~~n~l~~i~ 169 (242)
T d1xwdc1 133 DIQDNINIHTIERNSF--VGLSFESVILWLNKNGIQEIH 169 (242)
T ss_dssp EEESCTTCCEECTTSS--TTSBSSCEEEECCSSCCCEEC
T ss_pred cccccccccccccccc--ccccccceeeecccccccccc
Confidence 6777777755444444 444 47889999999998543
No 21
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.63 E-value=5.3e-16 Score=119.17 Aligned_cols=104 Identities=29% Similarity=0.460 Sum_probs=72.5
Q ss_pred CEEEccCCcCcccCCcCccCCCCcCEEEccCCcCccCCCccCcCCCCCCEEEccCCcCCCCCChhhcCCCCCcEEEeecc
Q 017800 42 KVLDMRMNNFNGKIPRKFVKSCNLTSLNLNGNRLEGPLPPSLVNCHHLEVLNVGNNQINDNFPNWLEILPELQVLILRSN 121 (365)
Q Consensus 42 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N 121 (365)
++|||++|+++ .++ .+..+++|++|++++|+|+ .+|+.++.+++|++|++++|++++ +| .++.+++|+.|++++|
T Consensus 1 R~L~Ls~n~l~-~l~-~l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~~-l~-~~~~l~~L~~L~l~~N 75 (124)
T d1dcea3 1 RVLHLAHKDLT-VLC-HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNN 75 (124)
T ss_dssp SEEECTTSCCS-SCC-CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSS
T ss_pred CEEEcCCCCCC-CCc-ccccCCCCCEEECCCCccC-cchhhhhhhhcccccccccccccc-cC-ccccccccCeEECCCC
Confidence 46777777776 444 3677777777888877777 566677777778888888887776 44 4777777888888887
Q ss_pred ccccccCCCCCccCCCCccEEEcCCCcccC
Q 017800 122 RFWGPIGENTTIVPFPSLRIIDLSHNEFTG 151 (365)
Q Consensus 122 ~l~~~~~~~~~~~~l~~L~~L~ls~N~l~~ 151 (365)
++... +....+..+++|+.|++++|+++.
T Consensus 76 ~i~~~-~~~~~l~~~~~L~~L~l~~N~i~~ 104 (124)
T d1dcea3 76 RLQQS-AAIQPLVSCPRLVLLNLQGNSLCQ 104 (124)
T ss_dssp CCCSS-STTGGGGGCTTCCEEECTTSGGGG
T ss_pred ccCCC-CCchhhcCCCCCCEEECCCCcCCc
Confidence 77543 221123667788888888887764
No 22
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.61 E-value=1.4e-15 Score=130.88 Aligned_cols=201 Identities=12% Similarity=0.014 Sum_probs=129.8
Q ss_pred cEEEccCCCCCCcCCCCCCCCcEEECCCCCCCCEEEccCCcCcccCCcCccCCCCcCEEEccCCcCccCC-CccCcCCCC
Q 017800 10 YYLDLSNNFLTNIEYFPPTNMTQLNFDSNLTHKVLDMRMNNFNGKIPRKFVKSCNLTSLNLNGNRLEGPL-PPSLVNCHH 88 (365)
Q Consensus 10 ~~L~Ls~N~l~~~~~~~~~~L~~L~ls~N~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-p~~l~~l~~ 88 (365)
+.++.++..++.+++.-.+ ++++|++++|+++...+.+|.++++|++|++++|.+...+ +..|.+++.
T Consensus 11 ~~i~c~~~~l~~iP~~l~~-----------~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~ 79 (242)
T d1xwdc1 11 RVFLCQESKVTEIPSDLPR-----------NAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPK 79 (242)
T ss_dssp SEEEEESCSCSSCCSCSCS-----------CCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTT
T ss_pred CEEEEeCCCCCCcCCCCCC-----------CCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeeccccccccc
Confidence 5778888888855432222 2477889999998656668999999999999999987644 456888999
Q ss_pred CCEEEccC-CcCCCCCChhhcCCCCCcEEEeeccccccccCCCCCccCCCCccEEEcCCCcccCccchhhhhhhh-hhcc
Q 017800 89 LEVLNVGN-NQINDNFPNWLEILPELQVLILRSNRFWGPIGENTTIVPFPSLRIIDLSHNEFTGVLLTGYLDNFK-AMMH 166 (365)
Q Consensus 89 L~~L~L~~-N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~l~-~L~~ 166 (365)
++++++.. |.+....+..|..+++|+.+++++|.+....+. .....+..+..+..+++.+....+.. +..+. .+..
T Consensus 80 l~~l~~~~~n~l~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~-~~~~~l~~l~~~~~~n~~l~~i~~~~-~~~~~~~l~~ 157 (242)
T d1xwdc1 80 LHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDV-HKIHSLQKVLLDIQDNINIHTIERNS-FVGLSFESVI 157 (242)
T ss_dssp CCEEEEECCTTCCEECTTSEECCTTCCEEEEESCCCCSCCCC-TTTCBSSCEEEEEESCTTCCEECTTS-STTSBSSCEE
T ss_pred cccccccccccccccccccccccccccccccchhhhcccccc-cccccccccccccccccccccccccc-ccccccccee
Confidence 99998764 778887778889999999999999988643322 22245667777777777776443322 33222 1221
Q ss_pred cCCCcccccccCCCCCCCccceEEEEEeccccchhhhhhheeeEEcCCCccccCCChhhhcccccccccCcCCCcc
Q 017800 167 GNNISVEVDYMTPLNSSNYYESIILTIKGIDIKMERILTIFMTIDLSSNKFQGGIPEVVGKLNLLKGLNISHNNLT 242 (365)
Q Consensus 167 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~L~ 242 (365)
+.... .. ...+....+......+.+++++|+++...+..|.++++|++|+|++|+|+
T Consensus 158 L~l~~---n~----------------l~~i~~~~~~~~~l~~~~~l~~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~ 214 (242)
T d1xwdc1 158 LWLNK---NG----------------IQEIHNCAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIH 214 (242)
T ss_dssp EECCS---SC----------------CCEECTTTTTTCCEEEEECTTCTTCCCCCTTTTTTSCCCSEEECTTSCCC
T ss_pred eeccc---cc----------------ccccccccccchhhhccccccccccccccHHHhcCCCCCCEEECCCCcCC
Confidence 11100 00 11111222222222344567788888555556788888887777776665
No 23
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.59 E-value=9.2e-14 Score=125.36 Aligned_cols=114 Identities=23% Similarity=0.277 Sum_probs=86.7
Q ss_pred CCCcEEECCCC---------CCCCEEEccCCcCcccCCcCccCCCCcCEEEccCCcCccCCCccCcCCCCCCEEEccCCc
Q 017800 28 TNMTQLNFDSN---------LTHKVLDMRMNNFNGKIPRKFVKSCNLTSLNLNGNRLEGPLPPSLVNCHHLEVLNVGNNQ 98 (365)
Q Consensus 28 ~~L~~L~ls~N---------~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~ 98 (365)
.++++||++++ ++|++|+|++|+|+ .+|..+ .+|+.|++++|+++ .++. + .+.|++|++++|.
T Consensus 38 ~~l~~LdLs~~~L~~lp~~~~~L~~L~Ls~N~l~-~lp~~~---~~L~~L~l~~n~l~-~l~~-l--p~~L~~L~L~~n~ 109 (353)
T d1jl5a_ 38 RQAHELELNNLGLSSLPELPPHLESLVASCNSLT-ELPELP---QSLKSLLVDNNNLK-ALSD-L--PPLLEYLGVSNNQ 109 (353)
T ss_dssp HTCSEEECTTSCCSCCCSCCTTCSEEECCSSCCS-SCCCCC---TTCCEEECCSSCCS-CCCS-C--CTTCCEEECCSSC
T ss_pred cCCCEEEeCCCCCCCCCCCCCCCCEEECCCCCCc-ccccch---hhhhhhhhhhcccc-hhhh-h--ccccccccccccc
Confidence 46889999988 68999999999999 778654 57999999999998 4443 2 2469999999999
Q ss_pred CCCCCChhhcCCCCCcEEEeeccccccccCCC----------------CCccCCCCccEEEcCCCcccC
Q 017800 99 INDNFPNWLEILPELQVLILRSNRFWGPIGEN----------------TTIVPFPSLRIIDLSHNEFTG 151 (365)
Q Consensus 99 l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~----------------~~~~~l~~L~~L~ls~N~l~~ 151 (365)
++. +|. ++.+++|+.|++++|.+....... ..+..++.++.+++++|.+..
T Consensus 110 l~~-lp~-~~~l~~L~~L~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~l~~l~~l~~L~l~~n~~~~ 176 (353)
T d1jl5a_ 110 LEK-LPE-LQNSSFLKIIDVDNNSLKKLPDLPPSLEFIAAGNNQLEELPELQNLPFLTAIYADNNSLKK 176 (353)
T ss_dssp CSS-CCC-CTTCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSSCCCCTTCTTCCEEECCSSCCSS
T ss_pred ccc-ccc-hhhhccceeeccccccccccccccccccchhhccccccccccccccccceecccccccccc
Confidence 987 664 678999999999999875332210 012456677777777776654
No 24
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=1.5e-15 Score=122.25 Aligned_cols=87 Identities=16% Similarity=0.302 Sum_probs=42.8
Q ss_pred ccCCCCcCEEEccCCcCccCCCccCcCCCCCCEEEccCCcCCCCCChhhcCCCCCcEEEeeccccccccCCCCCccCCCC
Q 017800 59 FVKSCNLTSLNLNGNRLEGPLPPSLVNCHHLEVLNVGNNQINDNFPNWLEILPELQVLILRSNRFWGPIGENTTIVPFPS 138 (365)
Q Consensus 59 ~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~ 138 (365)
|.+..++++|+|++|+|+ .++..+..+++|++|++++|+++. ++ .+..+++|++|++++|+++...+..+ ..+++
T Consensus 14 ~~n~~~lr~L~L~~n~I~-~i~~~~~~l~~L~~L~Ls~N~i~~-l~-~~~~l~~L~~L~ls~N~i~~l~~~~~--~~l~~ 88 (162)
T d1a9na_ 14 YTNAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIRK-LD-GFPLLRRLKTLLVNNNRICRIGEGLD--QALPD 88 (162)
T ss_dssp EECTTSCEEEECTTSCCC-SCCCGGGGTTCCSEEECCSSCCCE-EC-CCCCCSSCCEEECCSSCCCEECSCHH--HHCTT
T ss_pred ccCcCcCcEEECCCCCCC-ccCccccccccCCEEECCCCCCCc-cC-CcccCcchhhhhcccccccCCCcccc--ccccc
Confidence 334445555555555555 334444445555555555555554 22 24455555555555555543222211 34555
Q ss_pred ccEEEcCCCccc
Q 017800 139 LRIIDLSHNEFT 150 (365)
Q Consensus 139 L~~L~ls~N~l~ 150 (365)
|+.|++++|.++
T Consensus 89 L~~L~L~~N~i~ 100 (162)
T d1a9na_ 89 LTELILTNNSLV 100 (162)
T ss_dssp CCEEECCSCCCC
T ss_pred cccceecccccc
Confidence 555555555554
No 25
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.57 E-value=7e-15 Score=112.78 Aligned_cols=104 Identities=24% Similarity=0.263 Sum_probs=86.9
Q ss_pred cEEEccCCCCCCcCCCCCCCCcEEECCCCCCCCEEEccCCcCcccCCcCccCCCCcCEEEccCCcCccCCCccCcCCCCC
Q 017800 10 YYLDLSNNFLTNIEYFPPTNMTQLNFDSNLTHKVLDMRMNNFNGKIPRKFVKSCNLTSLNLNGNRLEGPLPPSLVNCHHL 89 (365)
Q Consensus 10 ~~L~Ls~N~l~~~~~~~~~~L~~L~ls~N~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L 89 (365)
++|||++|+++.... +.++ ++|++|++++|.++ .+|+.++.+++|+.|++++|+|++ +| .+..+++|
T Consensus 1 R~L~Ls~n~l~~l~~--l~~l--------~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~~-l~-~~~~l~~L 67 (124)
T d1dcea3 1 RVLHLAHKDLTVLCH--LEQL--------LLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRL 67 (124)
T ss_dssp SEEECTTSCCSSCCC--GGGG--------TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSC
T ss_pred CEEEcCCCCCCCCcc--cccC--------CCCCEEECCCCccC-cchhhhhhhhcccccccccccccc-cC-cccccccc
Confidence 589999999986532 2233 34588899999998 678889999999999999999994 55 58999999
Q ss_pred CEEEccCCcCCCCC-ChhhcCCCCCcEEEeeccccccc
Q 017800 90 EVLNVGNNQINDNF-PNWLEILPELQVLILRSNRFWGP 126 (365)
Q Consensus 90 ~~L~L~~N~l~~~~-p~~l~~l~~L~~L~L~~N~l~~~ 126 (365)
++|++++|++++.. ...+..+++|++|++++|+++..
T Consensus 68 ~~L~l~~N~i~~~~~~~~l~~~~~L~~L~l~~N~i~~~ 105 (124)
T d1dcea3 68 QELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQE 105 (124)
T ss_dssp CEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGS
T ss_pred CeEECCCCccCCCCCchhhcCCCCCCEEECCCCcCCcC
Confidence 99999999998743 25688999999999999999643
No 26
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=99.56 E-value=6.4e-16 Score=140.22 Aligned_cols=145 Identities=17% Similarity=0.173 Sum_probs=88.8
Q ss_pred cCCcccEEEccCCCCCCcCC-------CCCCCCcEEECCCC-----------------------CCCCEEEccCCcCccc
Q 017800 5 GIATLYYLDLSNNFLTNIEY-------FPPTNMTQLNFDSN-----------------------LTHKVLDMRMNNFNGK 54 (365)
Q Consensus 5 ~l~~L~~L~Ls~N~l~~~~~-------~~~~~L~~L~ls~N-----------------------~~L~~L~Ls~N~l~~~ 54 (365)
..++|+.|+|++|.++.... ...++|+.++++++ ++|+.|+|++|.++..
T Consensus 29 ~~~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~ 108 (344)
T d2ca6a1 29 EDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPT 108 (344)
T ss_dssp HCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTT
T ss_pred hCCCCCEEECcCCcCCHHHHHHHHHHHHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCcccccccccccccc
Confidence 35678889999988765322 45677777777654 5677777777777643
Q ss_pred ----CCcCccCCCCcCEEEccCCcCccCCCc----c---------CcCCCCCCEEEccCCcCCCCC----ChhhcCCCCC
Q 017800 55 ----IPRKFVKSCNLTSLNLNGNRLEGPLPP----S---------LVNCHHLEVLNVGNNQINDNF----PNWLEILPEL 113 (365)
Q Consensus 55 ----~p~~~~~l~~L~~L~L~~N~l~~~~p~----~---------l~~l~~L~~L~L~~N~l~~~~----p~~l~~l~~L 113 (365)
+...+...++|++|++++|.++..-.. . ....+.|+.+++++|.++... ...+...+.|
T Consensus 109 ~~~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~l~~~l~~~~~L 188 (344)
T d2ca6a1 109 AQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLL 188 (344)
T ss_dssp THHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTC
T ss_pred cccchhhhhcccccchheecccccccccccccccccccccccccccccCcccceeecccccccccccccccchhhhhhhh
Confidence 222334567777777777776421100 0 124566777777777765422 2234456677
Q ss_pred cEEEeeccccccc-----cCCCCCccCCCCccEEEcCCCcccC
Q 017800 114 QVLILRSNRFWGP-----IGENTTIVPFPSLRIIDLSHNEFTG 151 (365)
Q Consensus 114 ~~L~L~~N~l~~~-----~~~~~~~~~l~~L~~L~ls~N~l~~ 151 (365)
+.|++++|.++.. +...+ ...++|+.|++++|.++.
T Consensus 189 ~~L~L~~n~i~~~g~~~~l~~~l--~~~~~L~~L~Ls~N~i~~ 229 (344)
T d2ca6a1 189 HTVKMVQNGIRPEGIEHLLLEGL--AYCQELKVLDLQDNTFTH 229 (344)
T ss_dssp CEEECCSSCCCHHHHHHHHHTTG--GGCTTCCEEECCSSCCHH
T ss_pred cccccccccccccccccchhhhh--cchhhhcccccccccccc
Confidence 7777777776431 22222 556777777777777653
No 27
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.55 E-value=3.8e-15 Score=119.93 Aligned_cols=126 Identities=19% Similarity=0.184 Sum_probs=79.5
Q ss_pred CCCCEEEccCCcCcccCCcCccCCCCcCEEEccCCcCccCCCccCcCCCCCCEEEccCCcCCCCCChhhcCCCCCcEEEe
Q 017800 39 LTHKVLDMRMNNFNGKIPRKFVKSCNLTSLNLNGNRLEGPLPPSLVNCHHLEVLNVGNNQINDNFPNWLEILPELQVLIL 118 (365)
Q Consensus 39 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L 118 (365)
.+++.|||++|+|+ .++..+..+++|+.|+|++|+|+. ++ .+..+++|++|++++|+++...+..+..+++|+.|++
T Consensus 18 ~~lr~L~L~~n~I~-~i~~~~~~l~~L~~L~Ls~N~i~~-l~-~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L~~L~L 94 (162)
T d1a9na_ 18 VRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIRK-LD-GFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELIL 94 (162)
T ss_dssp TSCEEEECTTSCCC-SCCCGGGGTTCCSEEECCSSCCCE-EC-CCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEEC
T ss_pred CcCcEEECCCCCCC-ccCccccccccCCEEECCCCCCCc-cC-CcccCcchhhhhcccccccCCCcccccccccccccee
Confidence 34567777777776 455556667777777777777773 33 4677777777777777777754555566777777777
Q ss_pred eccccccccCCCCCccCCCCccEEEcCCCcccCccc--hhhhhhhhhhcccC
Q 017800 119 RSNRFWGPIGENTTIVPFPSLRIIDLSHNEFTGVLL--TGYLDNFKAMMHGN 168 (365)
Q Consensus 119 ~~N~l~~~~~~~~~~~~l~~L~~L~ls~N~l~~~~~--~~~~~~l~~L~~l~ 168 (365)
++|++... ++...+..+++|+.|++++|+++.... ...+..++.|+.++
T Consensus 95 ~~N~i~~~-~~l~~l~~l~~L~~L~l~~N~i~~~~~~r~~~i~~lp~L~~LD 145 (162)
T d1a9na_ 95 TNNSLVEL-GDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLD 145 (162)
T ss_dssp CSCCCCCG-GGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEET
T ss_pred cccccccc-ccccccccccccchhhcCCCccccccchHHHHHHHCCCcCeeC
Confidence 77777532 211122667777777777777764321 11244455554443
No 28
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.47 E-value=2.5e-15 Score=132.52 Aligned_cols=83 Identities=19% Similarity=0.253 Sum_probs=48.6
Q ss_pred CCCCEEEccCCcCccc-CCcCccCCCCcCEEEccCCcCccCCCccCcCCCCCCEEEccCC-cCCCC-CChhhcCCCCCcE
Q 017800 39 LTHKVLDMRMNNFNGK-IPRKFVKSCNLTSLNLNGNRLEGPLPPSLVNCHHLEVLNVGNN-QINDN-FPNWLEILPELQV 115 (365)
Q Consensus 39 ~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N-~l~~~-~p~~l~~l~~L~~ 115 (365)
.+|++||++++.++.. ++..+..+++|++|+++++.+++..+..++.+++|++|+++++ .+++. +......+++|++
T Consensus 46 ~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L~~ 125 (284)
T d2astb2 46 FRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDE 125 (284)
T ss_dssp BCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCE
T ss_pred CCCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHhccc
Confidence 4566677776666532 2334556667777777777666555566666667777777663 44421 1112335666777
Q ss_pred EEeecc
Q 017800 116 LILRSN 121 (365)
Q Consensus 116 L~L~~N 121 (365)
|+++++
T Consensus 126 L~ls~c 131 (284)
T d2astb2 126 LNLSWC 131 (284)
T ss_dssp EECCCC
T ss_pred cccccc
Confidence 777664
No 29
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.46 E-value=2.9e-15 Score=140.10 Aligned_cols=92 Identities=20% Similarity=0.314 Sum_probs=52.2
Q ss_pred cccEEEccCCCCCCcCC----CCCCCCcEEECCCC-----------------CCCCEEEccCCcCccc----CCcCcc-C
Q 017800 8 TLYYLDLSNNFLTNIEY----FPPTNMTQLNFDSN-----------------LTHKVLDMRMNNFNGK----IPRKFV-K 61 (365)
Q Consensus 8 ~L~~L~Ls~N~l~~~~~----~~~~~L~~L~ls~N-----------------~~L~~L~Ls~N~l~~~----~p~~~~-~ 61 (365)
+|+.||+++|++++..- ..+++++.|+|++| ++|+.|||++|.|+.. +...+. .
T Consensus 3 ~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~~ 82 (460)
T d1z7xw1 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTP 82 (460)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCST
T ss_pred CCCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhcC
Confidence 46666666666665321 44556666666666 5566666666666421 122222 1
Q ss_pred CCCcCEEEccCCcCccC----CCccCcCCCCCCEEEccCCcC
Q 017800 62 SCNLTSLNLNGNRLEGP----LPPSLVNCHHLEVLNVGNNQI 99 (365)
Q Consensus 62 l~~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L~L~~N~l 99 (365)
..+|++|+|++|+++.. ++..+..+++|++|++++|.+
T Consensus 83 ~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~i 124 (460)
T d1z7xw1 83 SCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLL 124 (460)
T ss_dssp TCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBC
T ss_pred CCCCCEEECCCCCccccccccccchhhccccccccccccccc
Confidence 23566666666666532 334555666666666666655
No 30
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=99.44 E-value=1.5e-14 Score=131.08 Aligned_cols=198 Identities=18% Similarity=0.179 Sum_probs=136.7
Q ss_pred cCCcccEEEccCCCCCCcC---C----------CCCCCCcEEECCCC-----------------CCCCEEEccCCcCccc
Q 017800 5 GIATLYYLDLSNNFLTNIE---Y----------FPPTNMTQLNFDSN-----------------LTHKVLDMRMNNFNGK 54 (365)
Q Consensus 5 ~l~~L~~L~Ls~N~l~~~~---~----------~~~~~L~~L~ls~N-----------------~~L~~L~Ls~N~l~~~ 54 (365)
..++|+.|+++++...... + ..+++|++|++++| ++|+.|++++|.++..
T Consensus 57 ~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~n~l~~~ 136 (344)
T d2ca6a1 57 SKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQ 136 (344)
T ss_dssp TCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHH
T ss_pred hCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCcccccccccccccccccchhhhhcccccchheeccccccccc
Confidence 5689999999988665332 1 45788999999998 7899999999988532
Q ss_pred CCcC-------------ccCCCCcCEEEccCCcCccC----CCccCcCCCCCCEEEccCCcCCCC-----CChhhcCCCC
Q 017800 55 IPRK-------------FVKSCNLTSLNLNGNRLEGP----LPPSLVNCHHLEVLNVGNNQINDN-----FPNWLEILPE 112 (365)
Q Consensus 55 ~p~~-------------~~~l~~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L~L~~N~l~~~-----~p~~l~~l~~ 112 (365)
.... ....+.|+.+++++|+++.. +...+..++.|++|++++|+++.. +...+..+++
T Consensus 137 ~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~ 216 (344)
T d2ca6a1 137 AGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQE 216 (344)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTT
T ss_pred ccccccccccccccccccccCcccceeecccccccccccccccchhhhhhhhcccccccccccccccccchhhhhcchhh
Confidence 1111 13467899999999998733 333456788999999999998752 2234667899
Q ss_pred CcEEEeeccccccc----cCCCCCccCCCCccEEEcCCCcccCccchhhhhhhhhhcccCCCcccccccCCCCCCCccce
Q 017800 113 LQVLILRSNRFWGP----IGENTTIVPFPSLRIIDLSHNEFTGVLLTGYLDNFKAMMHGNNISVEVDYMTPLNSSNYYES 188 (365)
Q Consensus 113 L~~L~L~~N~l~~~----~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~l~~L~~l~~~~~~~~~~~~~~~~~~~~~ 188 (365)
|+.|++++|.++.. +...+ ...++|++|++++|.+++.....+... +....
T Consensus 217 L~~L~Ls~N~i~~~g~~~L~~~l--~~~~~L~~L~Ls~n~i~~~g~~~l~~~---l~~~~-------------------- 271 (344)
T d2ca6a1 217 LKVLDLQDNTFTHLGSSALAIAL--KSWPNLRELGLNDCLLSARGAAAVVDA---FSKLE-------------------- 271 (344)
T ss_dssp CCEEECCSSCCHHHHHHHHHHHG--GGCTTCCEEECTTCCCCHHHHHHHHHH---HHTCS--------------------
T ss_pred hcccccccccccccccccccccc--cccccchhhhhhcCccCchhhHHHHHH---hhhcc--------------------
Confidence 99999999998532 22223 678999999999999876533222221 21111
Q ss_pred EEEEEeccccchhhhhhheeeEEcCCCccccCCChhhh-----cccccccccCcCCCcc
Q 017800 189 IILTIKGIDIKMERILTIFMTIDLSSNKFQGGIPEVVG-----KLNLLKGLNISHNNLT 242 (365)
Q Consensus 189 ~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~-----~l~~L~~L~Ls~N~L~ 242 (365)
...|++||+++|+|+......+. ..+.|+.|+|++|++.
T Consensus 272 ---------------~~~L~~L~ls~N~i~~~~~~~l~~~l~~~~~~L~~L~l~~N~~~ 315 (344)
T d2ca6a1 272 ---------------NIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFS 315 (344)
T ss_dssp ---------------SCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSC
T ss_pred ---------------CCCCCEEECCCCcCChHHHHHHHHHHHccCCCCCEEECCCCcCC
Confidence 24688999999998854333332 3556666666655553
No 31
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.41 E-value=9.3e-16 Score=127.82 Aligned_cols=90 Identities=22% Similarity=0.316 Sum_probs=51.0
Q ss_pred CCcCccCCCCcCEEEccCCcCccCCCccCcCCCCCCEEEccCCcCCCCCChhhcCCCCCcEEEeeccccccccCCCCCcc
Q 017800 55 IPRKFVKSCNLTSLNLNGNRLEGPLPPSLVNCHHLEVLNVGNNQINDNFPNWLEILPELQVLILRSNRFWGPIGENTTIV 134 (365)
Q Consensus 55 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~ 134 (365)
+|.++..+++|++|+|++|+|+ .++ .+.++++|++|++++|.++. +|..+..+++|+.|++++|+++.. + .+ .
T Consensus 40 l~~sl~~L~~L~~L~Ls~n~I~-~i~-~l~~l~~L~~L~Ls~N~i~~-i~~~~~~~~~L~~L~l~~N~i~~l-~-~~--~ 112 (198)
T d1m9la_ 40 MDATLSTLKACKHLALSTNNIE-KIS-SLSGMENLRILSLGRNLIKK-IENLDAVADTLEELWISYNQIASL-S-GI--E 112 (198)
T ss_dssp CHHHHHHTTTCCEEECSEEEES-CCC-CHHHHTTCCEEECCEEEECS-CSSHHHHHHHCCEEECSEEECCCH-H-HH--H
T ss_pred hhhHHhcccccceeECcccCCC-Ccc-cccCCccccChhhccccccc-cccccccccccccccccccccccc-c-cc--c
Confidence 3445556666666666666666 333 35666666666666666654 444444445566666666665432 1 12 4
Q ss_pred CCCCccEEEcCCCcccC
Q 017800 135 PFPSLRIIDLSHNEFTG 151 (365)
Q Consensus 135 ~l~~L~~L~ls~N~l~~ 151 (365)
.+++|+.|++++|.++.
T Consensus 113 ~l~~L~~L~L~~N~i~~ 129 (198)
T d1m9la_ 113 KLVNLRVLYMSNNKITN 129 (198)
T ss_dssp HHHHSSEEEESEEECCC
T ss_pred ccccccccccccchhcc
Confidence 55666666666666553
No 32
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.36 E-value=1.8e-12 Score=103.26 Aligned_cols=106 Identities=21% Similarity=0.129 Sum_probs=86.2
Q ss_pred CCEEEccCCcCcccCCcCccCCCCcCEEEccCC-cCccCCCccCcCCCCCCEEEccCCcCCCCCChhhcCCCCCcEEEee
Q 017800 41 HKVLDMRMNNFNGKIPRKFVKSCNLTSLNLNGN-RLEGPLPPSLVNCHHLEVLNVGNNQINDNFPNWLEILPELQVLILR 119 (365)
Q Consensus 41 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~ 119 (365)
.+.++.+++.+. ..|..+..+++|++|++++| .++...+..|.++++|+.|++++|+|+...|.+|..+++|++|+|+
T Consensus 10 ~~~l~c~~~~~~-~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls 88 (156)
T d2ifga3 10 SSGLRCTRDGAL-DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (156)
T ss_dssp SSCEECCSSCCC-TTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CCeEEecCCCCc-cCcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceecc
Confidence 356788888887 56777888899999999766 4886667789999999999999999998778889999999999999
Q ss_pred ccccccccCCCCCccCCCCccEEEcCCCccc
Q 017800 120 SNRFWGPIGENTTIVPFPSLRIIDLSHNEFT 150 (365)
Q Consensus 120 ~N~l~~~~~~~~~~~~l~~L~~L~ls~N~l~ 150 (365)
+|+++. +|... ....+|+.|+|++|++.
T Consensus 89 ~N~l~~-l~~~~--~~~~~l~~L~L~~Np~~ 116 (156)
T d2ifga3 89 FNALES-LSWKT--VQGLSLQELVLSGNPLH 116 (156)
T ss_dssp SSCCSC-CCSTT--TCSCCCCEEECCSSCCC
T ss_pred CCCCcc-cChhh--hccccccccccCCCccc
Confidence 999974 44433 34457999999999885
No 33
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.29 E-value=3.1e-13 Score=126.00 Aligned_cols=90 Identities=21% Similarity=0.135 Sum_probs=57.9
Q ss_pred CCcCEEEccCCcCcc-----CCCccCcCCCCCCEEEccCCcCCCCC----ChhhcCCCCCcEEEeeccccccccCCCC--
Q 017800 63 CNLTSLNLNGNRLEG-----PLPPSLVNCHHLEVLNVGNNQINDNF----PNWLEILPELQVLILRSNRFWGPIGENT-- 131 (365)
Q Consensus 63 ~~L~~L~L~~N~l~~-----~~p~~l~~l~~L~~L~L~~N~l~~~~----p~~l~~l~~L~~L~L~~N~l~~~~~~~~-- 131 (365)
..++.+++++|++.. ..+........++.+++++|.+.... ...+...+.++.+++++|.++......+
T Consensus 226 ~~~~~l~~~~n~~~~~~~~~~~~~~~~~~~~l~~l~l~~n~i~~~~~~~~~~~l~~~~~l~~l~l~~n~i~~~~~~~l~~ 305 (460)
T d1z7xw1 226 ASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCE 305 (460)
T ss_dssp TTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHH
T ss_pred ccccccchhhccccccccchhhcccccccccccccccccccccccccccccccccccccccccccccccccccccchhhc
Confidence 455666666665532 12233455778999999999887532 2345567899999999998853211110
Q ss_pred -CccCCCCccEEEcCCCcccCc
Q 017800 132 -TIVPFPSLRIIDLSHNEFTGV 152 (365)
Q Consensus 132 -~~~~l~~L~~L~ls~N~l~~~ 152 (365)
.......|+.+++++|.++..
T Consensus 306 ~l~~~~~~L~~l~l~~~~l~~~ 327 (460)
T d1z7xw1 306 TLLEPGCQLESLWVKSCSFTAA 327 (460)
T ss_dssp HHTSTTCCCCEEECTTSCCBGG
T ss_pred cccccccccccccccccchhhh
Confidence 002346789999999988754
No 34
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.28 E-value=2.2e-14 Score=119.37 Aligned_cols=109 Identities=24% Similarity=0.218 Sum_probs=84.2
Q ss_pred CCCCEEEccCCcCcccCCcCccCCCCcCEEEccCCcCccCCCccCcCCCCCCEEEccCCcCCCCCChhhcCCCCCcEEEe
Q 017800 39 LTHKVLDMRMNNFNGKIPRKFVKSCNLTSLNLNGNRLEGPLPPSLVNCHHLEVLNVGNNQINDNFPNWLEILPELQVLIL 118 (365)
Q Consensus 39 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L 118 (365)
++|++|+|++|+|+ .++ .+..+++|+.|+|++|+|+ .+|.....+++|++|++++|+++. + +.+..+++|++|++
T Consensus 48 ~~L~~L~Ls~n~I~-~i~-~l~~l~~L~~L~Ls~N~i~-~i~~~~~~~~~L~~L~l~~N~i~~-l-~~~~~l~~L~~L~L 122 (198)
T d1m9la_ 48 KACKHLALSTNNIE-KIS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-L-SGIEKLVNLRVLYM 122 (198)
T ss_dssp TTCCEEECSEEEES-CCC-CHHHHTTCCEEECCEEEEC-SCSSHHHHHHHCCEEECSEEECCC-H-HHHHHHHHSSEEEE
T ss_pred cccceeECcccCCC-Ccc-cccCCccccChhhcccccc-cccccccccccccccccccccccc-c-cccccccccccccc
Confidence 56688899999988 454 4888899999999999988 566555556789999999999986 3 35778889999999
Q ss_pred eccccccccC-CCCCccCCCCccEEEcCCCcccCccc
Q 017800 119 RSNRFWGPIG-ENTTIVPFPSLRIIDLSHNEFTGVLL 154 (365)
Q Consensus 119 ~~N~l~~~~~-~~~~~~~l~~L~~L~ls~N~l~~~~~ 154 (365)
++|+++.... ..+ ..+++|+.|++++|++....+
T Consensus 123 ~~N~i~~~~~~~~l--~~l~~L~~L~L~~N~l~~~~~ 157 (198)
T d1m9la_ 123 SNNKITNWGEIDKL--AALDKLEDLLLAGNPLYNDYK 157 (198)
T ss_dssp SEEECCCHHHHHHH--TTTTTCSEEEECSSHHHHHHC
T ss_pred ccchhccccccccc--cCCCccceeecCCCccccCcc
Confidence 9998864321 223 778999999999998865543
No 35
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.25 E-value=1.7e-11 Score=97.44 Aligned_cols=108 Identities=15% Similarity=0.025 Sum_probs=84.9
Q ss_pred CcccEEEccCCCCCCcCCCCCCCCcEEECCCCCCCCEEEccCC-cCcccCCcCccCCCCcCEEEccCCcCccCCCccCcC
Q 017800 7 ATLYYLDLSNNFLTNIEYFPPTNMTQLNFDSNLTHKVLDMRMN-NFNGKIPRKFVKSCNLTSLNLNGNRLEGPLPPSLVN 85 (365)
Q Consensus 7 ~~L~~L~Ls~N~l~~~~~~~~~~L~~L~ls~N~~L~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~ 85 (365)
...+.++.+++.++..+ ..++.++ +|+.|++++| .++...+.+|.++++|+.|+|++|+|+...|.+|.+
T Consensus 8 ~~~~~l~c~~~~~~~~p-~~l~~l~--------~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~ 78 (156)
T d2ifga3 8 HGSSGLRCTRDGALDSL-HHLPGAE--------NLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHF 78 (156)
T ss_dssp SSSSCEECCSSCCCTTT-TTSCSCS--------CCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGS
T ss_pred CCCCeEEecCCCCccCc-ccccCcc--------ccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccc
Confidence 34567888888887653 3333333 3477788655 477666778999999999999999999888889999
Q ss_pred CCCCCEEEccCCcCCCCCChhhcCCCCCcEEEeeccccc
Q 017800 86 CHHLEVLNVGNNQINDNFPNWLEILPELQVLILRSNRFW 124 (365)
Q Consensus 86 l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 124 (365)
+++|++|+|++|+|+...+..+. ..+|+.|+|++|.+.
T Consensus 79 l~~L~~L~Ls~N~l~~l~~~~~~-~~~l~~L~L~~Np~~ 116 (156)
T d2ifga3 79 TPRLSRLNLSFNALESLSWKTVQ-GLSLQELVLSGNPLH 116 (156)
T ss_dssp CSCCCEEECCSSCCSCCCSTTTC-SCCCCEEECCSSCCC
T ss_pred cccccceeccCCCCcccChhhhc-cccccccccCCCccc
Confidence 99999999999999975555554 447999999999873
No 36
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.20 E-value=4.3e-12 Score=111.41 Aligned_cols=146 Identities=14% Similarity=0.145 Sum_probs=106.0
Q ss_pred cCCcccEEEccCCCCCCcCC----CCCCCCcEEECCCC-------------CCCCEEEccCC-cCccc-CCcCccCCCCc
Q 017800 5 GIATLYYLDLSNNFLTNIEY----FPPTNMTQLNFDSN-------------LTHKVLDMRMN-NFNGK-IPRKFVKSCNL 65 (365)
Q Consensus 5 ~l~~L~~L~Ls~N~l~~~~~----~~~~~L~~L~ls~N-------------~~L~~L~Ls~N-~l~~~-~p~~~~~l~~L 65 (365)
...+|++||++++.++.... ..+++|++|+++++ ++|++|+++++ .++.. +..-+..+++|
T Consensus 44 ~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L 123 (284)
T d2astb2 44 SPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRL 123 (284)
T ss_dssp CCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTC
T ss_pred cCCCCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHhc
Confidence 56789999999999876432 77899999999998 78999999995 56532 22224568999
Q ss_pred CEEEccCC-cCccC-CCccCc-CCCCCCEEEccCC--cCCCC-CChhhcCCCCCcEEEeeccc-cccccCCCCCccCCCC
Q 017800 66 TSLNLNGN-RLEGP-LPPSLV-NCHHLEVLNVGNN--QINDN-FPNWLEILPELQVLILRSNR-FWGPIGENTTIVPFPS 138 (365)
Q Consensus 66 ~~L~L~~N-~l~~~-~p~~l~-~l~~L~~L~L~~N--~l~~~-~p~~l~~l~~L~~L~L~~N~-l~~~~~~~~~~~~l~~ 138 (365)
++|+++++ .++.. +...+. .++.|+.|+++++ .+++. +......+++|++|++++|. +++.....+ .++++
T Consensus 124 ~~L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~i~~~~l~~l~~~~~~L~~L~L~~~~~itd~~~~~l--~~~~~ 201 (284)
T d2astb2 124 DELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEF--FQLNY 201 (284)
T ss_dssp CEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGG--GGCTT
T ss_pred cccccccccccccccchhhhcccccccchhhhcccccccccccccccccccccccccccccccCCCchhhhhh--cccCc
Confidence 99999996 45422 122232 3578999999975 34432 22334578999999999864 665555555 78999
Q ss_pred ccEEEcCCC-cccCc
Q 017800 139 LRIIDLSHN-EFTGV 152 (365)
Q Consensus 139 L~~L~ls~N-~l~~~ 152 (365)
|++|+++++ .+++.
T Consensus 202 L~~L~L~~C~~i~~~ 216 (284)
T d2astb2 202 LQHLSLSRCYDIIPE 216 (284)
T ss_dssp CCEEECTTCTTCCGG
T ss_pred CCEEECCCCCCCChH
Confidence 999999995 55543
No 37
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.45 E-value=2.8e-09 Score=84.89 Aligned_cols=44 Identities=34% Similarity=0.509 Sum_probs=20.3
Q ss_pred cCCCCCcEEEeeccccccccCCCCCccCCCCccEEEcCCCcccC
Q 017800 108 EILPELQVLILRSNRFWGPIGENTTIVPFPSLRIIDLSHNEFTG 151 (365)
Q Consensus 108 ~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~ls~N~l~~ 151 (365)
..+++|++|+|++|+++...+....+..+++|+.|++++|.++.
T Consensus 62 ~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~ 105 (162)
T d1koha1 62 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKS 105 (162)
T ss_dssp HHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCC
T ss_pred HhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCcccc
Confidence 34455555555555554321111111345556666666665553
No 38
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.43 E-value=1.1e-09 Score=87.37 Aligned_cols=40 Identities=30% Similarity=0.380 Sum_probs=16.1
Q ss_pred CCCcCEEEccCCcCccCC--CccCcCCCCCCEEEccCCcCCC
Q 017800 62 SCNLTSLNLNGNRLEGPL--PPSLVNCHHLEVLNVGNNQIND 101 (365)
Q Consensus 62 l~~L~~L~L~~N~l~~~~--p~~l~~l~~L~~L~L~~N~l~~ 101 (365)
+++|++|+|++|+|+..- +..+..+++|+.|++++|.++.
T Consensus 64 ~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~ 105 (162)
T d1koha1 64 IPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKS 105 (162)
T ss_dssp CTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCC
T ss_pred CCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCcccc
Confidence 444444444444444211 1223334444444444444443
No 39
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=97.98 E-value=1.9e-06 Score=68.21 Aligned_cols=109 Identities=13% Similarity=0.080 Sum_probs=62.0
Q ss_pred CCCCEEEccCC-cCccc----CCcCccCCCCcCEEEccCCcCccC----CCccCcCCCCCCEEEccCCcCCCCCC----h
Q 017800 39 LTHKVLDMRMN-NFNGK----IPRKFVKSCNLTSLNLNGNRLEGP----LPPSLVNCHHLEVLNVGNNQINDNFP----N 105 (365)
Q Consensus 39 ~~L~~L~Ls~N-~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L~L~~N~l~~~~p----~ 105 (365)
+.|+.|+|+++ .++.. +-..+...+.|++|+|++|.++.. +...+...+.|++|++++|.++.... .
T Consensus 15 ~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~l~~ 94 (167)
T d1pgva_ 15 TDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLR 94 (167)
T ss_dssp SSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHH
T ss_pred CCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHHHHH
Confidence 45566666653 34421 223455566677777777776532 22334456677777777777765322 2
Q ss_pred hhcCCCCCcEEEeeccccccc-------cCCCCCccCCCCccEEEcCCCcc
Q 017800 106 WLEILPELQVLILRSNRFWGP-------IGENTTIVPFPSLRIIDLSHNEF 149 (365)
Q Consensus 106 ~l~~l~~L~~L~L~~N~l~~~-------~~~~~~~~~l~~L~~L~ls~N~l 149 (365)
.+...++|+.|++++|.+... +...+ ...++|+.|+++.+..
T Consensus 95 aL~~n~sL~~L~l~~n~~~~~g~~~~~~l~~~L--~~n~sL~~l~l~~~~~ 143 (167)
T d1pgva_ 95 STLVTQSIVEFKADNQRQSVLGNQVEMDMMMAI--EENESLLRVGISFASM 143 (167)
T ss_dssp HTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHH--HHCSSCCEEECCCCCH
T ss_pred HHHhCCcCCEEECCCCcCCCccHHHHHHHHHHH--HhCCCccEeeCcCCCc
Confidence 344556777777777654211 11111 4467888888877654
No 40
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=97.92 E-value=1.4e-06 Score=69.08 Aligned_cols=90 Identities=21% Similarity=0.273 Sum_probs=51.6
Q ss_pred CCCCcCEEEccCC-cCccC----CCccCcCCCCCCEEEccCCcCCCCC----ChhhcCCCCCcEEEeeccccccccCCCC
Q 017800 61 KSCNLTSLNLNGN-RLEGP----LPPSLVNCHHLEVLNVGNNQINDNF----PNWLEILPELQVLILRSNRFWGPIGENT 131 (365)
Q Consensus 61 ~l~~L~~L~L~~N-~l~~~----~p~~l~~l~~L~~L~L~~N~l~~~~----p~~l~~l~~L~~L~L~~N~l~~~~~~~~ 131 (365)
+.+.|++|+|+++ .++.. +...+...+.|++|++++|.++... ...+...+.|+.|++++|.++......+
T Consensus 13 n~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~l 92 (167)
T d1pgva_ 13 DDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARL 92 (167)
T ss_dssp TCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHH
T ss_pred CCCCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHHH
Confidence 4567888888764 45422 2334556677888888887776422 2234445667777777776653211100
Q ss_pred --CccCCCCccEEEcCCCccc
Q 017800 132 --TIVPFPSLRIIDLSHNEFT 150 (365)
Q Consensus 132 --~~~~l~~L~~L~ls~N~l~ 150 (365)
.+...++|+.|++++|.+.
T Consensus 93 ~~aL~~n~sL~~L~l~~n~~~ 113 (167)
T d1pgva_ 93 LRSTLVTQSIVEFKADNQRQS 113 (167)
T ss_dssp HHHTTTTCCCSEEECCCCSSC
T ss_pred HHHHHhCCcCCEEECCCCcCC
Confidence 1244566777777666544
No 41
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=97.30 E-value=1.4e-05 Score=62.95 Aligned_cols=64 Identities=20% Similarity=0.227 Sum_probs=33.3
Q ss_pred cCCCCcCEEEccC-CcCccC----CCccCcCCCCCCEEEccCCcCCCCCCh----hhcCCCCCcEEEeecccc
Q 017800 60 VKSCNLTSLNLNG-NRLEGP----LPPSLVNCHHLEVLNVGNNQINDNFPN----WLEILPELQVLILRSNRF 123 (365)
Q Consensus 60 ~~l~~L~~L~L~~-N~l~~~----~p~~l~~l~~L~~L~L~~N~l~~~~p~----~l~~l~~L~~L~L~~N~l 123 (365)
.+.+.|++|+|++ +.++.. +...+...+.|++|++++|.++..... .+...++++.+++++|.+
T Consensus 14 ~~~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~ 86 (166)
T d1io0a_ 14 NNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFI 86 (166)
T ss_dssp TTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCC
T ss_pred hcCCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccc
Confidence 3456677777766 345421 223344566677777777666542222 223344555555555544
No 42
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=97.18 E-value=5.7e-05 Score=59.25 Aligned_cols=115 Identities=18% Similarity=0.146 Sum_probs=72.4
Q ss_pred cCCcccEEEccC-CCCCCcCCCCCCCCcEEECCCCCCCCEEEccCCcCccc----CCcCccCCCCcCEEEccCCcCccC-
Q 017800 5 GIATLYYLDLSN-NFLTNIEYFPPTNMTQLNFDSNLTHKVLDMRMNNFNGK----IPRKFVKSCNLTSLNLNGNRLEGP- 78 (365)
Q Consensus 5 ~l~~L~~L~Ls~-N~l~~~~~~~~~~L~~L~ls~N~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~- 78 (365)
+.++|++|++++ +.++...-.. +- -.+..|++|+.|++++|.++.. +...+...+.++.+++++|.++..
T Consensus 15 ~~~~L~~L~L~~~~~i~~~~~~~---l~-~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g 90 (166)
T d1io0a_ 15 NDPDLEEVNLNNIMNIPVPTLKA---CA-EALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSG 90 (166)
T ss_dssp TCTTCCEEECTTCTTCCHHHHHH---HH-HHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHH
T ss_pred cCCCCcEEEcCCCCCCCHHHHHH---HH-HHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchh
Confidence 456777787776 4454322100 00 0012335668888888888743 223455678899999999988633
Q ss_pred ---CCccCcCCCCCCEEEc--cCCcCCCC----CChhhcCCCCCcEEEeecccc
Q 017800 79 ---LPPSLVNCHHLEVLNV--GNNQINDN----FPNWLEILPELQVLILRSNRF 123 (365)
Q Consensus 79 ---~p~~l~~l~~L~~L~L--~~N~l~~~----~p~~l~~l~~L~~L~L~~N~l 123 (365)
+...+...++|+.++| ++|.+... +...+...++|+.|+++.+..
T Consensus 91 ~~~l~~~l~~~~~L~~l~L~l~~n~i~~~~~~~La~~L~~n~~L~~L~l~~~~~ 144 (166)
T d1io0a_ 91 ILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQ 144 (166)
T ss_dssp HHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSH
T ss_pred HHHHHHHHHhCccccEEeeccCCCcCcHHHHHHHHHHHHhCCCcCEEeCcCCCC
Confidence 3356677888987665 46677542 334555788999999987654
Done!