Query 017808
Match_columns 365
No_of_seqs 267 out of 2046
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 05:16:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017808.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017808hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2z3y_A Lysine-specific histone 100.0 1.4E-40 4.7E-45 333.9 29.7 277 58-337 354-659 (662)
2 2xag_A Lysine-specific histone 100.0 5.8E-40 2E-44 333.7 27.5 276 59-337 526-830 (852)
3 4gut_A Lysine-specific histone 100.0 8.3E-39 2.8E-43 323.4 33.7 332 3-334 426-775 (776)
4 1s3e_A Amine oxidase [flavin-c 100.0 4E-37 1.4E-41 301.5 26.6 291 34-337 144-455 (520)
5 1rsg_A FMS1 protein; FAD bindi 100.0 2.9E-36 9.9E-41 295.1 31.6 304 33-340 136-511 (516)
6 2yg5_A Putrescine oxidase; oxi 100.0 6.1E-37 2.1E-41 295.2 23.9 288 35-336 145-451 (453)
7 1b37_A Protein (polyamine oxid 100.0 2.5E-34 8.6E-39 278.4 34.7 267 72-338 170-460 (472)
8 2vvm_A Monoamine oxidase N; FA 100.0 1.4E-34 4.7E-39 281.9 25.3 285 35-336 185-485 (495)
9 3k7m_X 6-hydroxy-L-nicotine ox 100.0 4.8E-33 1.6E-37 266.2 25.6 305 6-335 103-425 (431)
10 2iid_A L-amino-acid oxidase; f 100.0 3.4E-33 1.2E-37 272.3 21.7 242 93-337 231-485 (498)
11 2jae_A L-amino acid oxidase; o 100.0 7.3E-31 2.5E-35 255.2 20.8 239 94-337 230-486 (489)
12 3i6d_A Protoporphyrinogen oxid 100.0 2.1E-29 7.2E-34 243.3 21.7 278 33-336 147-468 (470)
13 3lov_A Protoporphyrinogen oxid 100.0 1.5E-28 5.1E-33 238.0 18.7 275 33-336 145-465 (475)
14 2ivd_A PPO, PPOX, protoporphyr 100.0 1.2E-27 4.2E-32 231.8 21.2 280 33-337 146-474 (478)
15 3qj4_A Renalase; FAD/NAD(P)-bi 100.0 2.2E-27 7.7E-32 220.1 20.7 228 95-335 104-341 (342)
16 1sez_A Protoporphyrinogen oxid 100.0 1.3E-27 4.4E-32 233.1 17.1 281 34-337 148-494 (504)
17 3ayj_A Pro-enzyme of L-phenyla 99.9 7.5E-28 2.6E-32 238.9 13.3 259 77-337 319-680 (721)
18 3nks_A Protoporphyrinogen oxid 99.9 4.3E-26 1.5E-30 220.8 18.1 276 34-335 142-473 (477)
19 3ka7_A Oxidoreductase; structu 99.9 9.2E-23 3.1E-27 194.4 21.1 274 32-333 132-424 (425)
20 4dsg_A UDP-galactopyranose mut 99.9 4.9E-21 1.7E-25 185.3 17.2 278 32-333 133-452 (484)
21 4dgk_A Phytoene dehydrogenase; 99.8 2.4E-20 8.2E-25 181.5 14.5 262 71-337 188-492 (501)
22 4gde_A UDP-galactopyranose mut 99.8 1.4E-19 4.8E-24 176.5 19.9 278 30-334 137-477 (513)
23 3nrn_A Uncharacterized protein 99.8 2.7E-19 9.3E-24 170.3 20.3 261 35-332 127-403 (421)
24 1yvv_A Amine oxidase, flavin-c 99.8 9.2E-19 3.1E-23 161.3 22.5 220 95-336 102-327 (336)
25 2e1m_C L-glutamate oxidase; L- 99.8 8.9E-20 3E-24 152.6 10.8 112 223-336 37-152 (181)
26 2b9w_A Putative aminooxidase; 99.8 1.4E-17 4.7E-22 158.6 16.1 266 35-333 142-423 (424)
27 2e1m_B L-glutamate oxidase; L- 99.5 3.2E-16 1.1E-20 122.0 -2.9 107 139-260 4-111 (130)
28 1v0j_A UDP-galactopyranose mut 99.4 2.7E-13 9.1E-18 127.9 4.9 126 34-194 137-275 (399)
29 1i8t_A UDP-galactopyranose mut 99.3 1.3E-11 4.5E-16 114.9 11.2 126 33-194 126-261 (367)
30 2bi7_A UDP-galactopyranose mut 99.2 6E-11 2E-15 111.1 13.2 118 33-190 130-260 (384)
31 3hdq_A UDP-galactopyranose mut 99.0 9.4E-09 3.2E-13 96.1 14.8 125 32-194 153-289 (397)
32 2bcg_G Secretory pathway GDP d 98.4 6E-06 2E-10 78.8 14.7 58 95-153 234-299 (453)
33 3p1w_A Rabgdi protein; GDI RAB 98.2 4E-06 1.4E-10 79.9 9.4 110 34-153 188-313 (475)
34 1d5t_A Guanine nucleotide diss 98.2 7.7E-06 2.6E-10 77.6 10.8 60 95-154 226-290 (433)
35 3kkj_A Amine oxidase, flavin-c 98.0 0.0008 2.7E-08 58.2 19.5 219 98-337 105-328 (336)
36 1vg0_A RAB proteins geranylger 97.8 3.1E-05 1.1E-09 76.3 7.1 86 93-194 368-461 (650)
37 2e1m_A L-glutamate oxidase; L- 97.3 0.00037 1.3E-08 64.4 6.7 74 78-151 292-370 (376)
38 3ihg_A RDME; flavoenzyme, anth 96.8 0.0097 3.3E-07 57.7 12.1 42 112-153 134-182 (535)
39 3e1t_A Halogenase; flavoprotei 95.7 0.068 2.3E-06 51.4 11.2 43 112-154 125-172 (512)
40 3dje_A Fructosyl amine: oxygen 95.6 0.018 6.3E-07 54.0 6.7 43 112-154 175-221 (438)
41 3nix_A Flavoprotein/dehydrogen 95.6 0.16 5.6E-06 47.1 13.2 42 112-153 120-165 (421)
42 3i3l_A Alkylhalidase CMLS; fla 95.5 0.2 7E-06 49.0 14.0 42 112-153 142-187 (591)
43 3nyc_A D-arginine dehydrogenas 95.4 0.017 5.8E-07 52.9 5.3 42 112-154 168-209 (381)
44 3ps9_A TRNA 5-methylaminomethy 95.2 0.027 9.3E-07 56.2 6.7 52 103-154 417-473 (676)
45 3v76_A Flavoprotein; structura 94.9 0.049 1.7E-06 51.0 7.2 54 99-153 128-186 (417)
46 3pvc_A TRNA 5-methylaminomethy 94.9 0.034 1.2E-06 55.6 6.4 52 103-154 412-469 (689)
47 3dme_A Conserved exported prot 94.9 0.041 1.4E-06 49.9 6.4 43 112-154 164-209 (369)
48 3rp8_A Flavoprotein monooxygen 94.5 0.053 1.8E-06 50.3 6.2 41 113-153 140-180 (407)
49 2uzz_A N-methyl-L-tryptophan o 94.3 0.06 2.1E-06 49.1 6.2 42 112-154 163-204 (372)
50 2v3a_A Rubredoxin reductase; a 94.2 0.085 2.9E-06 48.6 6.9 49 104-152 192-241 (384)
51 1y56_B Sarcosine oxidase; dehy 94.1 0.076 2.6E-06 48.6 6.4 42 112-154 163-205 (382)
52 3o0h_A Glutathione reductase; 94.1 0.082 2.8E-06 50.4 6.8 41 112-152 246-286 (484)
53 2oln_A NIKD protein; flavoprot 94.1 0.073 2.5E-06 49.1 6.2 50 103-153 157-207 (397)
54 2ywl_A Thioredoxin reductase r 94.0 0.068 2.3E-06 43.3 5.2 39 112-152 70-108 (180)
55 2x3n_A Probable FAD-dependent 94.0 0.061 2.1E-06 49.7 5.5 49 105-153 113-165 (399)
56 1ryi_A Glycine oxidase; flavop 93.9 0.057 2E-06 49.4 5.1 41 112-153 178-218 (382)
57 1xdi_A RV3303C-LPDA; reductase 93.8 0.099 3.4E-06 50.0 6.8 42 112-153 237-278 (499)
58 2i0z_A NAD(FAD)-utilizing dehy 93.8 0.091 3.1E-06 49.5 6.4 51 102-152 133-189 (447)
59 2vou_A 2,6-dihydroxypyridine h 93.8 0.12 4.2E-06 47.7 7.2 52 102-153 98-152 (397)
60 2gf3_A MSOX, monomeric sarcosi 93.7 0.085 2.9E-06 48.3 6.0 42 112-154 164-205 (389)
61 3iwa_A FAD-dependent pyridine 93.7 0.11 3.6E-06 49.4 6.8 41 112-152 216-256 (472)
62 2xdo_A TETX2 protein; tetracyc 93.6 0.12 3.9E-06 47.9 6.6 52 103-154 128-182 (398)
63 3lxd_A FAD-dependent pyridine 93.5 0.14 4.6E-06 47.7 7.0 41 112-152 208-249 (415)
64 3fg2_P Putative rubredoxin red 93.3 0.15 5E-06 47.3 6.9 41 112-152 198-239 (404)
65 3nlc_A Uncharacterized protein 93.3 0.13 4.4E-06 49.9 6.5 51 103-153 220-276 (549)
66 2yqu_A 2-oxoglutarate dehydrog 93.3 0.14 4.9E-06 48.2 6.8 42 112-153 222-263 (455)
67 1m6i_A Programmed cell death p 93.1 0.16 5.5E-06 48.5 6.9 47 106-152 233-280 (493)
68 3ef6_A Toluene 1,2-dioxygenase 92.9 0.16 5.6E-06 47.1 6.5 41 112-152 199-239 (410)
69 2gqf_A Hypothetical protein HI 92.7 0.17 5.8E-06 47.0 6.2 50 102-152 108-166 (401)
70 2r9z_A Glutathione amide reduc 92.6 0.21 7E-06 47.3 6.8 41 112-152 221-262 (463)
71 1mo9_A ORF3; nucleotide bindin 92.6 0.15 5.1E-06 49.1 5.9 48 105-152 261-314 (523)
72 3oc4_A Oxidoreductase, pyridin 92.3 0.2 6.9E-06 47.2 6.4 40 112-152 203-242 (452)
73 3oz2_A Digeranylgeranylglycero 92.3 2.4 8.3E-05 38.2 13.6 37 301-337 277-316 (397)
74 1ges_A Glutathione reductase; 92.2 0.24 8.1E-06 46.7 6.7 41 112-152 222-263 (450)
75 4hb9_A Similarities with proba 92.0 0.29 1E-05 44.9 7.1 51 103-153 112-165 (412)
76 2wpf_A Trypanothione reductase 92.0 0.26 8.8E-06 47.1 6.8 41 112-152 249-290 (495)
77 2hqm_A GR, grase, glutathione 92.0 0.26 8.8E-06 46.9 6.7 41 112-152 240-283 (479)
78 1fec_A Trypanothione reductase 91.9 0.23 8E-06 47.3 6.3 41 112-152 245-286 (490)
79 4a9w_A Monooxygenase; baeyer-v 91.6 0.25 8.4E-06 44.4 5.9 41 112-153 90-131 (357)
80 2gag_B Heterotetrameric sarcos 91.3 0.27 9.2E-06 45.2 5.9 41 112-153 188-229 (405)
81 2zbw_A Thioredoxin reductase; 91.3 0.33 1.1E-05 43.3 6.4 42 112-153 79-120 (335)
82 1q1r_A Putidaredoxin reductase 91.1 0.4 1.4E-05 44.8 6.9 41 112-152 205-248 (431)
83 3ic9_A Dihydrolipoamide dehydr 91.0 0.38 1.3E-05 45.9 6.8 47 106-152 222-272 (492)
84 4dna_A Probable glutathione re 91.0 0.3 1E-05 46.1 6.0 40 112-152 225-266 (463)
85 1onf_A GR, grase, glutathione 90.7 0.4 1.4E-05 45.8 6.7 41 112-152 231-273 (500)
86 2cdu_A NADPH oxidase; flavoenz 90.5 0.45 1.6E-05 44.7 6.8 48 105-152 197-245 (452)
87 2qa2_A CABE, polyketide oxygen 90.4 0.37 1.3E-05 46.0 6.1 42 112-153 121-165 (499)
88 1w4x_A Phenylacetone monooxyge 90.4 0.34 1.2E-05 46.8 5.9 39 114-152 112-152 (542)
89 3axb_A Putative oxidoreductase 90.3 0.35 1.2E-05 45.3 5.8 42 112-154 195-254 (448)
90 3gwf_A Cyclohexanone monooxyge 90.3 0.43 1.5E-05 46.1 6.4 39 114-152 105-145 (540)
91 2eq6_A Pyruvate dehydrogenase 90.3 0.48 1.6E-05 44.8 6.7 41 112-152 224-269 (464)
92 2gv8_A Monooxygenase; FMO, FAD 90.2 0.42 1.4E-05 44.9 6.1 40 113-152 130-175 (447)
93 2qa1_A PGAE, polyketide oxygen 90.0 0.42 1.4E-05 45.7 6.1 42 112-153 120-164 (500)
94 3s5w_A L-ornithine 5-monooxyge 90.0 0.51 1.7E-05 44.4 6.6 42 112-153 330-376 (463)
95 3ntd_A FAD-dependent pyridine 89.9 0.55 1.9E-05 45.5 7.0 41 112-152 206-265 (565)
96 2qae_A Lipoamide, dihydrolipoy 89.9 0.5 1.7E-05 44.6 6.5 49 104-152 220-274 (468)
97 2cul_A Glucose-inhibited divis 89.9 0.42 1.5E-05 40.4 5.4 41 112-153 83-124 (232)
98 1ojt_A Surface protein; redox- 89.6 0.37 1.3E-05 45.7 5.4 41 112-152 240-284 (482)
99 3ab1_A Ferredoxin--NADP reduct 89.6 0.57 2E-05 42.3 6.4 42 112-153 88-130 (360)
100 3lad_A Dihydrolipoamide dehydr 89.4 0.51 1.7E-05 44.7 6.2 41 112-152 235-278 (476)
101 4ap3_A Steroid monooxygenase; 89.4 0.45 1.5E-05 46.1 5.8 39 114-152 117-157 (549)
102 1y56_A Hypothetical protein PH 89.2 0.66 2.3E-05 44.2 6.8 53 100-152 258-311 (493)
103 1pj5_A N,N-dimethylglycine oxi 89.2 0.51 1.7E-05 48.2 6.3 42 112-154 165-207 (830)
104 3d1c_A Flavin-containing putat 89.0 0.54 1.8E-05 42.5 5.8 41 112-153 102-142 (369)
105 2a8x_A Dihydrolipoyl dehydroge 88.9 0.7 2.4E-05 43.5 6.7 41 112-152 226-269 (464)
106 3alj_A 2-methyl-3-hydroxypyrid 88.4 0.62 2.1E-05 42.5 5.8 39 112-153 121-159 (379)
107 1ebd_A E3BD, dihydrolipoamide 88.3 0.56 1.9E-05 44.1 5.6 42 112-153 225-269 (455)
108 1zmd_A Dihydrolipoyl dehydroge 88.3 0.72 2.5E-05 43.6 6.3 41 112-152 234-280 (474)
109 3fmw_A Oxygenase; mithramycin, 88.1 0.4 1.4E-05 46.7 4.4 42 112-153 162-206 (570)
110 2gqw_A Ferredoxin reductase; f 88.1 0.83 2.8E-05 42.3 6.4 44 105-152 193-237 (408)
111 4b1b_A TRXR, thioredoxin reduc 88.0 0.85 2.9E-05 44.0 6.7 40 112-151 277-316 (542)
112 3cgv_A Geranylgeranyl reductas 88.0 0.54 1.9E-05 42.9 5.2 42 112-153 116-161 (397)
113 3fpz_A Thiazole biosynthetic e 87.9 0.33 1.1E-05 43.4 3.5 41 297-337 280-325 (326)
114 3c4n_A Uncharacterized protein 87.9 0.23 8E-06 46.0 2.6 50 103-153 172-235 (405)
115 1k0i_A P-hydroxybenzoate hydro 87.8 0.8 2.7E-05 41.9 6.2 50 105-154 109-163 (394)
116 3f8d_A Thioredoxin reductase ( 87.8 0.94 3.2E-05 39.8 6.4 41 112-153 84-124 (323)
117 1qo8_A Flavocytochrome C3 fuma 87.7 0.92 3.1E-05 44.0 6.8 41 112-152 264-310 (566)
118 1trb_A Thioredoxin reductase; 87.7 0.94 3.2E-05 39.9 6.4 41 112-152 198-245 (320)
119 1zk7_A HGII, reductase, mercur 87.6 0.93 3.2E-05 42.7 6.6 41 112-153 230-270 (467)
120 2e4g_A Tryptophan halogenase; 87.6 0.92 3.2E-05 43.8 6.7 42 112-154 209-252 (550)
121 1dxl_A Dihydrolipoamide dehydr 87.5 0.81 2.8E-05 43.2 6.1 42 112-153 232-278 (470)
122 3lzw_A Ferredoxin--NADP reduct 87.4 0.72 2.5E-05 40.8 5.5 40 112-152 81-121 (332)
123 1y0p_A Fumarate reductase flav 87.3 1 3.4E-05 43.8 6.8 41 112-152 269-315 (571)
124 3atr_A Conserved archaeal prot 87.1 1 3.4E-05 42.3 6.5 43 112-154 114-162 (453)
125 3urh_A Dihydrolipoyl dehydroge 87.0 0.87 3E-05 43.3 6.1 41 112-152 253-298 (491)
126 3uox_A Otemo; baeyer-villiger 87.0 0.72 2.4E-05 44.6 5.5 39 114-152 105-145 (545)
127 3c96_A Flavin-containing monoo 87.0 0.69 2.4E-05 42.7 5.2 49 104-153 112-168 (410)
128 3h8l_A NADH oxidase; membrane 86.8 0.74 2.5E-05 42.5 5.3 44 105-152 224-268 (409)
129 4at0_A 3-ketosteroid-delta4-5a 86.6 0.9 3.1E-05 43.4 6.0 52 101-152 200-262 (510)
130 3itj_A Thioredoxin reductase 1 86.6 0.78 2.7E-05 40.7 5.2 51 102-152 211-269 (338)
131 2q0l_A TRXR, thioredoxin reduc 86.6 1.1 3.9E-05 39.2 6.3 40 112-152 73-112 (311)
132 3vrd_B FCCB subunit, flavocyto 86.5 0.41 1.4E-05 44.1 3.4 40 113-152 217-256 (401)
133 1v59_A Dihydrolipoamide dehydr 86.5 0.87 3E-05 43.0 5.7 41 112-152 238-285 (478)
134 2weu_A Tryptophan 5-halogenase 86.4 1.3 4.3E-05 42.3 6.9 42 112-154 187-230 (511)
135 1d4d_A Flavocytochrome C fumar 86.4 1.2 4.2E-05 43.2 6.8 41 112-152 269-315 (572)
136 3l8k_A Dihydrolipoyl dehydroge 86.3 0.96 3.3E-05 42.6 5.9 49 104-152 215-270 (466)
137 3fbs_A Oxidoreductase; structu 86.1 1.2 4.1E-05 38.6 6.1 35 118-152 76-110 (297)
138 3dgh_A TRXR-1, thioredoxin red 86.1 1.2 4.1E-05 42.1 6.5 41 112-152 241-287 (483)
139 3klj_A NAD(FAD)-dependent dehy 85.9 0.79 2.7E-05 42.1 4.9 39 112-152 76-114 (385)
140 2i0z_A NAD(FAD)-utilizing dehy 85.9 0.69 2.4E-05 43.4 4.6 40 298-337 402-444 (447)
141 2qcu_A Aerobic glycerol-3-phos 85.8 1.3 4.6E-05 42.1 6.7 43 112-154 163-210 (501)
142 2xve_A Flavin-containing monoo 85.8 1.1 3.9E-05 42.2 6.1 41 112-152 115-164 (464)
143 2r0c_A REBC; flavin adenine di 85.6 1 3.4E-05 43.6 5.7 39 115-153 152-195 (549)
144 1fl2_A Alkyl hydroperoxide red 85.5 1.1 3.9E-05 39.2 5.7 42 112-153 70-114 (310)
145 3lzw_A Ferredoxin--NADP reduct 84.9 1.1 3.9E-05 39.5 5.4 50 103-152 193-248 (332)
146 2zxi_A TRNA uridine 5-carboxym 84.6 1.3 4.3E-05 43.5 5.9 41 112-153 138-179 (637)
147 3ics_A Coenzyme A-disulfide re 84.4 1.3 4.6E-05 43.0 6.1 39 112-152 242-280 (588)
148 4gcm_A TRXR, thioredoxin reduc 84.2 1.3 4.4E-05 39.0 5.4 42 296-338 266-307 (312)
149 3dk9_A Grase, GR, glutathione 84.2 1.6 5.4E-05 41.2 6.3 41 112-152 242-291 (478)
150 3f8d_A Thioredoxin reductase ( 83.4 1.8 6.1E-05 38.0 6.0 50 103-152 193-249 (323)
151 2q0l_A TRXR, thioredoxin reduc 83.2 2.1 7.2E-05 37.5 6.4 50 103-152 182-239 (311)
152 1rp0_A ARA6, thiazole biosynth 83.2 1.6 5.6E-05 38.0 5.6 49 104-152 124-189 (284)
153 1vdc_A NTR, NADPH dependent th 83.2 1.2 4.2E-05 39.4 4.9 40 112-153 84-123 (333)
154 2bc0_A NADH oxidase; flavoprot 83.0 2 6.8E-05 40.8 6.5 46 105-152 242-289 (490)
155 3s5w_A L-ornithine 5-monooxyge 82.9 1.8 6.3E-05 40.5 6.2 49 104-152 131-190 (463)
156 2zbw_A Thioredoxin reductase; 82.7 2.7 9.1E-05 37.2 6.9 41 112-152 205-250 (335)
157 3da1_A Glycerol-3-phosphate de 82.1 1.5 5.1E-05 42.5 5.3 43 112-154 184-232 (561)
158 1lvl_A Dihydrolipoamide dehydr 82.0 1.4 4.6E-05 41.5 4.9 39 112-152 226-266 (458)
159 2pyx_A Tryptophan halogenase; 81.9 2.3 7.9E-05 40.7 6.5 42 112-154 190-233 (526)
160 3kd9_A Coenzyme A disulfide re 81.6 1.7 5.8E-05 40.7 5.3 48 104-152 195-242 (449)
161 4a5l_A Thioredoxin reductase; 81.4 1.5 5.2E-05 38.4 4.8 42 296-338 272-313 (314)
162 3d1c_A Flavin-containing putat 81.4 1.6 5.4E-05 39.3 4.9 40 113-152 230-270 (369)
163 2aqj_A Tryptophan halogenase, 81.1 2.3 7.8E-05 40.9 6.2 42 112-154 179-222 (538)
164 1nhp_A NADH peroxidase; oxidor 81.1 2.1 7.3E-05 39.9 5.9 39 112-152 205-244 (447)
165 3ces_A MNMG, tRNA uridine 5-ca 81.1 1.7 5.7E-05 42.9 5.2 41 112-153 139-180 (651)
166 3cty_A Thioredoxin reductase; 80.9 3 0.0001 36.6 6.5 49 103-151 194-249 (319)
167 3cp8_A TRNA uridine 5-carboxym 80.7 1.8 6E-05 42.6 5.2 41 112-153 132-173 (641)
168 3r9u_A Thioredoxin reductase; 80.4 2.1 7.2E-05 37.4 5.3 38 300-338 276-313 (315)
169 2q7v_A Thioredoxin reductase; 80.3 3.2 0.00011 36.6 6.5 49 103-151 191-246 (325)
170 3r9u_A Thioredoxin reductase; 80.2 1.9 6.4E-05 37.7 4.9 38 112-152 76-116 (315)
171 1hyu_A AHPF, alkyl hydroperoxi 80.1 2.2 7.6E-05 40.8 5.7 43 296-339 476-518 (521)
172 3fbs_A Oxidoreductase; structu 79.3 2.1 7.2E-05 37.0 4.9 39 297-337 254-292 (297)
173 2cul_A Glucose-inhibited divis 78.9 1.5 5.2E-05 36.9 3.7 35 299-336 197-231 (232)
174 3itj_A Thioredoxin reductase 1 78.9 2.8 9.4E-05 37.0 5.6 40 112-152 98-140 (338)
175 2a87_A TRXR, TR, thioredoxin r 78.4 3 0.0001 37.0 5.7 42 297-339 277-318 (335)
176 2bry_A NEDD9 interacting prote 78.2 1.6 5.5E-05 41.6 4.0 43 112-154 180-230 (497)
177 3ab1_A Ferredoxin--NADP reduct 77.4 2.8 9.6E-05 37.6 5.3 41 112-152 216-261 (360)
178 2rgh_A Alpha-glycerophosphate 77.3 2.9 9.9E-05 40.6 5.6 43 112-154 202-250 (571)
179 3cgb_A Pyridine nucleotide-dis 77.3 3.9 0.00013 38.6 6.4 39 112-152 241-280 (480)
180 3dgz_A Thioredoxin reductase 2 76.7 3.8 0.00013 38.8 6.1 41 112-152 239-285 (488)
181 1trb_A Thioredoxin reductase; 76.2 3.7 0.00013 36.0 5.6 39 112-152 76-114 (320)
182 4fk1_A Putative thioredoxin re 76.2 2.2 7.4E-05 37.4 4.0 42 296-338 260-301 (304)
183 2q7v_A Thioredoxin reductase; 76.2 3.8 0.00013 36.1 5.7 42 296-338 272-313 (325)
184 1vdc_A NTR, NADPH dependent th 76.0 2.9 9.8E-05 37.0 4.8 42 297-339 284-325 (333)
185 2vdc_G Glutamate synthase [NAD 75.5 3.3 0.00011 38.9 5.3 42 296-339 405-446 (456)
186 4b63_A L-ornithine N5 monooxyg 75.5 3.7 0.00013 39.0 5.7 42 110-151 155-211 (501)
187 1fl2_A Alkyl hydroperoxide red 74.9 3.4 0.00012 36.0 5.0 41 297-338 266-306 (310)
188 2gmh_A Electron transfer flavo 74.9 5.6 0.00019 38.6 6.9 36 301-336 347-385 (584)
189 4g6h_A Rotenone-insensitive NA 74.8 3.2 0.00011 39.5 5.1 46 106-151 279-329 (502)
190 4a9w_A Monooxygenase; baeyer-v 74.1 2.2 7.6E-05 37.9 3.6 42 296-338 310-353 (357)
191 2wdq_A Succinate dehydrogenase 73.9 5.2 0.00018 38.9 6.4 42 112-153 157-205 (588)
192 3cty_A Thioredoxin reductase; 73.4 2.9 9.9E-05 36.8 4.1 41 296-337 276-316 (319)
193 4eqs_A Coenzyme A disulfide re 72.9 6.1 0.00021 36.7 6.4 46 103-152 192-238 (437)
194 2h88_A Succinate dehydrogenase 72.3 5.8 0.0002 38.9 6.3 50 104-153 156-216 (621)
195 3h28_A Sulfide-quinone reducta 72.2 3.3 0.00011 38.4 4.4 46 104-151 205-253 (430)
196 2bs2_A Quinol-fumarate reducta 72.1 7 0.00024 38.6 6.9 50 104-153 159-219 (660)
197 2dkh_A 3-hydroxybenzoate hydro 71.4 5.7 0.0002 39.0 6.1 49 105-153 147-210 (639)
198 2a87_A TRXR, TR, thioredoxin r 71.3 5 0.00017 35.5 5.3 39 112-152 85-124 (335)
199 2gqf_A Hypothetical protein HI 71.2 2.8 9.7E-05 38.6 3.6 36 298-333 361-399 (401)
200 3cgb_A Pyridine nucleotide-dis 71.1 4.9 0.00017 37.9 5.4 41 112-152 107-150 (480)
201 3k30_A Histamine dehydrogenase 71.0 2.9 9.8E-05 41.6 3.8 47 104-152 572-622 (690)
202 1kf6_A Fumarate reductase flav 70.3 5.8 0.0002 38.7 5.8 41 113-153 150-196 (602)
203 3hyw_A Sulfide-quinone reducta 70.2 7 0.00024 36.2 6.2 48 103-152 203-254 (430)
204 1q1r_A Putidaredoxin reductase 69.4 4.2 0.00014 37.8 4.4 39 112-152 74-112 (431)
205 3nlc_A Uncharacterized protein 68.5 4 0.00014 39.4 4.1 38 299-338 507-544 (549)
206 3ef6_A Toluene 1,2-dioxygenase 68.1 5.5 0.00019 36.6 4.9 39 112-152 71-109 (410)
207 1xhc_A NADH oxidase /nitrite r 67.6 4.4 0.00015 36.7 4.1 42 106-152 190-232 (367)
208 1ps9_A 2,4-dienoyl-COA reducta 66.7 6.8 0.00023 38.7 5.5 45 106-153 580-627 (671)
209 2gqw_A Ferredoxin reductase; f 65.9 6.4 0.00022 36.2 4.9 39 112-152 73-111 (408)
210 1m6i_A Programmed cell death p 65.8 4 0.00014 38.7 3.5 39 112-152 104-142 (493)
211 2ywl_A Thioredoxin reductase r 65.6 7.7 0.00026 30.7 4.8 40 297-337 132-171 (180)
212 1hyu_A AHPF, alkyl hydroperoxi 64.7 8.8 0.0003 36.6 5.7 42 112-153 281-325 (521)
213 1n4w_A CHOD, cholesterol oxida 64.6 8 0.00027 36.7 5.4 41 113-153 237-287 (504)
214 3sx6_A Sulfide-quinone reducta 64.4 9.9 0.00034 35.2 5.9 45 105-151 214-266 (437)
215 2bc0_A NADH oxidase; flavoprot 64.3 4.6 0.00016 38.2 3.6 41 112-152 106-147 (490)
216 3ntd_A FAD-dependent pyridine 64.2 6.6 0.00023 37.7 4.8 41 112-152 72-115 (565)
217 3h8l_A NADH oxidase; membrane 63.6 7.9 0.00027 35.4 5.0 38 299-336 298-335 (409)
218 1coy_A Cholesterol oxidase; ox 63.2 8.3 0.00028 36.7 5.2 42 112-153 241-292 (507)
219 1nhp_A NADH peroxidase; oxidor 62.4 9.4 0.00032 35.4 5.4 41 112-152 70-113 (447)
220 3ics_A Coenzyme A-disulfide re 61.8 9.2 0.00031 37.0 5.4 41 112-152 107-150 (588)
221 1chu_A Protein (L-aspartate ox 61.5 7.6 0.00026 37.3 4.7 39 298-336 365-410 (540)
222 3iwa_A FAD-dependent pyridine 61.2 9.7 0.00033 35.6 5.3 41 112-152 80-123 (472)
223 2gjc_A Thiazole biosynthetic e 60.9 6.6 0.00022 35.1 3.8 38 300-337 283-325 (326)
224 3v76_A Flavoprotein; structura 60.5 4.8 0.00016 37.3 2.9 34 298-331 380-416 (417)
225 1jnr_A Adenylylsulfate reducta 59.3 17 0.00058 35.7 6.8 43 297-339 428-470 (643)
226 2e5v_A L-aspartate oxidase; ar 59.1 6 0.00021 37.2 3.4 50 103-154 123-176 (472)
227 1xhc_A NADH oxidase /nitrite r 58.9 7.3 0.00025 35.2 3.8 38 112-152 74-111 (367)
228 3oc4_A Oxidoreductase, pyridin 58.5 6 0.0002 36.9 3.2 41 112-152 72-113 (452)
229 4fk1_A Putative thioredoxin re 57.0 13 0.00045 32.2 5.1 38 115-152 77-115 (304)
230 1kdg_A CDH, cellobiose dehydro 56.2 13 0.00046 35.5 5.4 48 105-152 201-259 (546)
231 3hyw_A Sulfide-quinone reducta 55.1 13 0.00043 34.4 4.8 39 112-153 70-108 (430)
232 2cdu_A NADPH oxidase; flavoenz 55.0 11 0.00039 34.9 4.5 41 112-152 72-115 (452)
233 3cp8_A TRNA uridine 5-carboxym 55.0 12 0.00041 36.7 4.7 36 299-337 377-412 (641)
234 4a5l_A Thioredoxin reductase; 54.0 25 0.00087 30.3 6.5 37 116-152 83-119 (314)
235 3lxd_A FAD-dependent pyridine 53.8 9.6 0.00033 34.9 3.8 39 112-152 79-117 (415)
236 1gte_A Dihydropyrimidine dehyd 53.8 20 0.00068 37.4 6.5 42 296-339 469-510 (1025)
237 3vrd_B FCCB subunit, flavocyto 53.6 15 0.0005 33.4 5.0 42 298-339 284-326 (401)
238 3kd9_A Coenzyme A disulfide re 53.2 15 0.00051 34.1 5.0 39 112-152 73-112 (449)
239 3qfa_A Thioredoxin reductase 1 53.1 21 0.00073 33.8 6.2 41 112-152 264-313 (519)
240 1jnr_A Adenylylsulfate reducta 52.6 18 0.00061 35.5 5.7 50 104-153 156-217 (643)
241 3jsk_A Cypbp37 protein; octame 51.8 9.4 0.00032 34.3 3.2 40 300-339 293-337 (344)
242 3sx6_A Sulfide-quinone reducta 51.4 16 0.00056 33.7 5.0 38 112-152 73-110 (437)
243 3h28_A Sulfide-quinone reducta 51.1 17 0.00059 33.4 5.1 43 296-338 281-334 (430)
244 1chu_A Protein (L-aspartate ox 50.3 15 0.0005 35.3 4.5 49 105-153 144-207 (540)
245 1qo8_A Flavocytochrome C3 fuma 49.1 8.7 0.0003 37.0 2.8 39 298-336 519-563 (566)
246 1y0p_A Fumarate reductase flav 47.6 8.4 0.00029 37.2 2.4 38 298-335 524-567 (571)
247 3uox_A Otemo; baeyer-villiger 47.4 15 0.00051 35.3 4.1 44 106-154 345-391 (545)
248 1d4d_A Flavocytochrome C fumar 47.3 6.4 0.00022 38.1 1.5 38 298-335 525-568 (572)
249 1ebd_A E3BD, dihydrolipoamide 47.0 26 0.00089 32.4 5.7 37 296-334 296-332 (455)
250 3gwf_A Cyclohexanone monooxyge 46.6 12 0.00042 35.8 3.4 39 112-154 344-384 (540)
251 2x8g_A Thioredoxin glutathione 46.6 39 0.0013 32.6 7.0 41 112-152 340-393 (598)
252 3fg2_P Putative rubredoxin red 46.4 18 0.00061 33.0 4.3 38 112-152 71-108 (404)
253 3gyx_A Adenylylsulfate reducta 45.7 28 0.00095 34.3 5.8 44 296-339 448-491 (662)
254 3ces_A MNMG, tRNA uridine 5-ca 45.5 19 0.00065 35.4 4.5 34 300-336 384-417 (651)
255 3jsk_A Cypbp37 protein; octame 45.1 30 0.001 31.0 5.4 51 103-153 164-250 (344)
256 3ic9_A Dihydrolipoamide dehydr 44.8 20 0.00067 33.8 4.4 38 295-334 300-337 (492)
257 2jbv_A Choline oxidase; alcoho 44.6 20 0.00069 34.3 4.5 41 112-152 223-271 (546)
258 4dna_A Probable glutathione re 42.7 21 0.0007 33.3 4.2 37 296-334 294-330 (463)
259 3l8k_A Dihydrolipoyl dehydroge 42.6 21 0.00073 33.2 4.3 37 296-334 296-332 (466)
260 1pn0_A Phenol 2-monooxygenase; 41.9 35 0.0012 33.6 5.9 35 301-335 351-388 (665)
261 3dk9_A Grase, GR, glutathione 41.8 22 0.00074 33.2 4.2 37 296-334 319-355 (478)
262 3pl8_A Pyranose 2-oxidase; sub 41.7 20 0.00068 35.1 4.0 41 112-152 274-322 (623)
263 1o94_A Tmadh, trimethylamine d 41.0 20 0.00068 35.8 4.0 47 104-152 576-644 (729)
264 4eqs_A Coenzyme A disulfide re 40.9 33 0.0011 31.7 5.3 42 112-153 71-115 (437)
265 1y56_A Hypothetical protein PH 40.6 14 0.00048 34.8 2.7 50 103-152 161-217 (493)
266 4at0_A 3-ketosteroid-delta4-5a 40.2 17 0.00058 34.4 3.2 36 298-333 466-507 (510)
267 3lad_A Dihydrolipoamide dehydr 40.2 24 0.00084 32.8 4.3 37 296-334 306-342 (476)
268 3o0h_A Glutathione reductase; 40.2 24 0.00082 33.1 4.2 38 296-335 314-351 (484)
269 2gjc_A Thiazole biosynthetic e 40.0 49 0.0017 29.3 6.0 51 103-153 150-238 (326)
270 2a8x_A Dihydrolipoyl dehydroge 39.8 25 0.00085 32.7 4.3 37 296-334 297-333 (464)
271 3gyx_A Adenylylsulfate reducta 39.3 31 0.0011 34.0 5.0 50 103-152 170-231 (662)
272 3dgh_A TRXR-1, thioredoxin red 39.2 26 0.0009 32.7 4.4 38 296-334 314-351 (483)
273 3urh_A Dihydrolipoyl dehydroge 39.0 22 0.00075 33.4 3.8 37 296-334 326-362 (491)
274 1v59_A Dihydrolipoamide dehydr 38.8 28 0.00096 32.4 4.5 37 296-334 313-349 (478)
275 3dgz_A Thioredoxin reductase 2 38.4 28 0.00096 32.6 4.4 38 296-334 314-351 (488)
276 3qfa_A Thioredoxin reductase 1 38.2 28 0.00097 33.0 4.5 38 296-334 342-379 (519)
277 2zxi_A TRNA uridine 5-carboxym 38.2 27 0.00093 34.2 4.3 34 300-336 389-422 (637)
278 2hqm_A GR, grase, glutathione 37.9 28 0.00094 32.6 4.3 37 296-334 310-346 (479)
279 1ges_A Glutathione reductase; 37.6 28 0.00095 32.3 4.2 36 297-334 292-327 (450)
280 3atr_A Conserved archaeal prot 37.3 39 0.0013 31.2 5.2 37 301-337 282-321 (453)
281 1zmd_A Dihydrolipoyl dehydroge 36.7 25 0.00086 32.8 3.8 37 296-334 308-344 (474)
282 1dxl_A Dihydrolipoamide dehydr 36.3 25 0.00086 32.7 3.7 37 296-334 305-341 (470)
283 3g5s_A Methylenetetrahydrofola 35.4 24 0.00081 32.6 3.1 34 300-336 328-361 (443)
284 2wpf_A Trypanothione reductase 34.5 33 0.0011 32.3 4.2 37 296-334 318-354 (495)
285 2x8g_A Thioredoxin glutathione 34.4 37 0.0013 32.8 4.6 38 296-334 421-458 (598)
286 3klj_A NAD(FAD)-dependent dehy 34.4 23 0.00078 32.2 3.0 39 296-334 253-293 (385)
287 1fec_A Trypanothione reductase 34.3 33 0.0011 32.2 4.2 37 296-334 314-350 (490)
288 2gag_A Heterotetrameric sarcos 33.9 44 0.0015 34.6 5.3 42 111-152 329-381 (965)
289 2qae_A Lipoamide, dihydrolipoy 33.7 30 0.001 32.1 3.8 38 296-334 302-339 (468)
290 2v3a_A Rubredoxin reductase; a 33.5 31 0.0011 31.0 3.7 38 112-152 74-111 (384)
291 2r9z_A Glutathione amide reduc 33.4 36 0.0012 31.6 4.2 36 297-334 291-326 (463)
292 1kf6_A Fumarate reductase flav 33.4 38 0.0013 32.9 4.5 40 297-336 369-415 (602)
293 1ojt_A Surface protein; redox- 33.1 31 0.0011 32.3 3.8 37 296-334 312-348 (482)
294 1zk7_A HGII, reductase, mercur 33.1 31 0.001 32.1 3.7 37 296-334 297-333 (467)
295 2eq6_A Pyruvate dehydrogenase 32.7 32 0.0011 32.0 3.7 37 296-334 297-333 (464)
296 2bs2_A Quinol-fumarate reducta 32.6 39 0.0013 33.2 4.5 40 298-337 383-429 (660)
297 2gmh_A Electron transfer flavo 32.6 45 0.0015 32.2 4.9 42 112-153 158-216 (584)
298 3f7w_A Putative fructosamine-3 32.3 37 0.0013 29.0 3.9 43 101-152 1-48 (288)
299 1xdi_A RV3303C-LPDA; reductase 31.9 32 0.0011 32.3 3.7 37 296-334 305-341 (499)
300 2yqu_A 2-oxoglutarate dehydrog 31.3 44 0.0015 30.8 4.5 37 296-334 290-326 (455)
301 1ju2_A HydroxynitrIle lyase; f 31.2 44 0.0015 31.9 4.5 37 300-336 479-517 (536)
302 1mo9_A ORF3; nucleotide bindin 31.0 35 0.0012 32.3 3.8 36 297-334 342-377 (523)
303 2gv8_A Monooxygenase; FMO, FAD 29.8 33 0.0011 31.7 3.3 36 115-152 254-290 (447)
304 1lvl_A Dihydrolipoamide dehydr 29.3 39 0.0013 31.3 3.7 37 296-334 293-329 (458)
305 4ap3_A Steroid monooxygenase; 28.8 41 0.0014 32.2 3.8 37 113-154 358-396 (549)
306 2wdq_A Succinate dehydrogenase 28.7 27 0.00093 33.8 2.6 39 299-337 379-424 (588)
307 2h88_A Succinate dehydrogenase 27.3 30 0.001 33.8 2.6 39 298-336 387-432 (621)
308 1lqt_A FPRA; NADP+ derivative, 26.7 60 0.0021 30.1 4.5 42 111-152 265-324 (456)
309 1cjc_A Protein (adrenodoxin re 25.6 51 0.0017 30.7 3.8 38 300-338 359-396 (460)
310 1cjc_A Protein (adrenodoxin re 25.4 50 0.0017 30.7 3.7 42 111-152 270-331 (460)
311 3qvp_A Glucose oxidase; oxidor 24.9 62 0.0021 31.2 4.3 37 300-336 541-579 (583)
312 1rp0_A ARA6, thiazole biosynth 24.8 37 0.0013 29.1 2.5 38 300-337 233-275 (284)
313 1lqt_A FPRA; NADP+ derivative, 23.6 57 0.002 30.3 3.7 40 299-339 350-389 (456)
314 4g6h_A Rotenone-insensitive NA 23.5 65 0.0022 30.4 4.1 36 300-335 364-399 (502)
315 3cgv_A Geranylgeranyl reductas 23.3 98 0.0033 27.4 5.2 36 301-336 277-315 (397)
316 3q9t_A Choline dehydrogenase a 23.3 74 0.0025 30.7 4.5 36 300-335 535-572 (577)
317 2xve_A Flavin-containing monoo 22.5 79 0.0027 29.3 4.5 31 119-153 245-275 (464)
318 1gte_A Dihydropyrimidine dehyd 22.2 1.4E+02 0.0048 31.0 6.6 41 111-151 383-439 (1025)
319 4hb9_A Similarities with proba 21.8 88 0.003 27.8 4.6 34 301-334 311-347 (412)
320 2qa2_A CABE, polyketide oxygen 21.8 89 0.003 29.3 4.7 36 301-336 278-316 (499)
321 1gpe_A Protein (glucose oxidas 21.5 60 0.002 31.3 3.5 38 300-337 545-584 (587)
322 3fim_B ARYL-alcohol oxidase; A 21.3 75 0.0026 30.5 4.1 35 300-334 528-564 (566)
323 2qa1_A PGAE, polyketide oxygen 21.2 93 0.0032 29.2 4.7 35 301-335 277-314 (500)
324 2x3n_A Probable FAD-dependent 20.7 87 0.003 28.0 4.3 35 301-335 286-323 (399)
No 1
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=100.00 E-value=1.4e-40 Score=333.88 Aligned_cols=277 Identities=35% Similarity=0.591 Sum_probs=234.3
Q ss_pred HHHHHHHHHHhhhhhcCCCCcccChhccccc--cccCCCceeccCChHHHHHHHhccCCeecCceeEEEEecCCeeEEEE
Q 017808 58 AHKVLQWYLCRMEGWFAADAETISLKSWDKE--ELLPGGHGLMVRGYLPVINTLAKGLDIRLGHRVTKITRHYIGVKVTV 135 (365)
Q Consensus 58 ~~~~~~~~~~~~~~~~g~~~~~~S~~~~~~~--~~~~g~~~~~~gG~~~L~~~L~~~l~I~l~~~V~~I~~~~~~v~V~~ 135 (365)
.+.+++|++..++...+.+.+.+|+..|.++ ..+.|..+.++|||++|+++|+++++|++|++|++|.+++++|.|++
T Consensus 354 ~~~~l~~~~~~~~~~~~~~l~~ls~~~~~~~~~~~~~g~~~~~~gG~~~l~~~La~~l~I~l~~~V~~I~~~~~~v~V~~ 433 (662)
T 2z3y_A 354 DRQILDWHFANLEFANATPLSTLSLKHWDQDDDFEFTGSHLTVRNGYSCVPVALAEGLDIKLNTAVRQVRYTASGCEVIA 433 (662)
T ss_dssp HHHHHHHHHHHHHHHTTSCGGGBBTTTTTTTGGGCCBSCCEEETTCTTHHHHHHTTTCEEETTEEEEEEEEETTEEEEEE
T ss_pred HHHHHHHHHHHHHHhcCCChhhcCHhhcCCCcccccCCceeeecCcHHHHHHHHHhcCceecCCeEEEEEECCCcEEEEE
Confidence 3456666655555556788899999877643 23456788999999999999999999999999999999999999998
Q ss_pred cC------CcEEEcCEEEEecChhhhhc--CCccccCCCcHHHHHHHhhcCCccccEEEEEcCCCCCCC-CCcceeecCC
Q 017808 136 EG------GKTFVADAVVVAVPLGVLKA--RTIKFEPRLPDWKEAAIDDLGVGIENKIIMHFDKVFWPN-VEFLGVVSDT 206 (365)
Q Consensus 136 ~~------g~~~~ad~VI~t~p~~~l~~--~~i~f~p~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~w~~-~~~~g~~~~~ 206 (365)
.+ |+++.||+||+|+|+++|++ ..+.|.|+||+.+.+++++++|+++.||++.|+++||++ ...+|.+.+.
T Consensus 434 ~~~~~~~~~~~~~Ad~VI~tvP~~vL~~l~~~i~f~P~LP~~k~~Ai~~l~~g~~~KV~l~f~~~fW~~~~~~~G~l~~~ 513 (662)
T 2z3y_A 434 VNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGST 513 (662)
T ss_dssp EESSCTTCEEEEEESEEEECCCHHHHHCSSCSSEEESCCCHHHHHHHHHSEECCCEEEEEECSSCCSCTTCSEEEECCSS
T ss_pred eecccCCCCeEEEeCEEEECCCHHHHhcccCceEEcCCCCHHHHHHHHhCCccceeEEEEEcCcccccCCCCceeeecCC
Confidence 76 57899999999999999987 347899999999999999999999999999999999964 4677776443
Q ss_pred CC---ceeEeeeccCCCCCceEEEEecchhhHHHhcCCHHHHHHHHHHHHHHhcCC--CCCccEEEeccCCCCCCCCCcC
Q 017808 207 SY---GCSYFLNLHKATGHCVLVYMPAGQLARDIEKMSDEAAANFAFTQLKKILPD--ASSPIQYLVSHWGTDANSLGSY 281 (365)
Q Consensus 207 ~~---~~~~~~~~~~~~g~~~l~~~~~g~~a~~~~~~~~~e~~~~~~~~L~~~~~~--~~~p~~~~~~~W~~~~~~~g~y 281 (365)
.. ....+++.. +.++|++|+.|+.+..+..++++++++.++++|+++||. .++|..+.+++|.++||++|+|
T Consensus 514 ~~~~~~~~~~~~~~---~~~vL~~~~~G~~a~~~~~lsdee~~~~~l~~L~~~~g~~~~~~p~~~~v~~W~~dp~~~Gsy 590 (662)
T 2z3y_A 514 TASRGELFLFWNLY---KAPILLALVAGEAAGIMENISDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSY 590 (662)
T ss_dssp STTTTEEEEEECCS---SSSEEEEEECTHHHHHHTTSCHHHHHHHHHHHHHHHHCTTSSCCCSEEEECCTTTCTTTSSSC
T ss_pred CCCCCceeEEEeCC---CCCEEEEEeccHhHHHHHhCCHHHHHHHHHHHHHHHhCCcccCCCceeEEEEECCCCCCCccc
Confidence 21 123333332 456899999999999999999999999999999999986 4579999999999999999999
Q ss_pred CCCCCCCCHHHHHHHhCCC-------------CCEEEeccccCCCCcchhHHHHHHHHHHHHHHHHHHH
Q 017808 282 SYDTVGKSHDLYERLRIPV-------------DNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVL 337 (365)
Q Consensus 282 ~~~~~g~~~~~~~~l~~p~-------------~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l~ 337 (365)
++.++|.....++.+++|+ ++||||||+|+..|+|+||||++||+|||++|++.+.
T Consensus 591 s~~~pg~~~~~~~~l~~p~~~~~~~~~~~~~~grl~FAGe~ts~~~~g~v~GAi~SG~raA~~i~~~~~ 659 (662)
T 2z3y_A 591 SYVAAGSSGNDYDLMAQPITPGPSIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQFL 659 (662)
T ss_dssp EECBTTCCTHHHHHHHCCBCC---------CCCCEEECSGGGCTTSTTSHHHHHHHHHHHHHHHHHHHT
T ss_pred ccCCCCCchhhHHHHhCcCccccccccccCCCCcEEEEeccccCCCCcCHHHHHHHHHHHHHHHHHHcc
Confidence 9999998777778887775 6899999999998899999999999999999988753
No 2
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=100.00 E-value=5.8e-40 Score=333.74 Aligned_cols=276 Identities=36% Similarity=0.592 Sum_probs=232.9
Q ss_pred HHHHHHHHHhhhhhcCCCCcccChhccccc--cccCCCceeccCChHHHHHHHhccCCeecCceeEEEEecCCeeEEEEc
Q 017808 59 HKVLQWYLCRMEGWFAADAETISLKSWDKE--ELLPGGHGLMVRGYLPVINTLAKGLDIRLGHRVTKITRHYIGVKVTVE 136 (365)
Q Consensus 59 ~~~~~~~~~~~~~~~g~~~~~~S~~~~~~~--~~~~g~~~~~~gG~~~L~~~L~~~l~I~l~~~V~~I~~~~~~v~V~~~ 136 (365)
+.+++|++..+....+.+++.+|+..|.++ ..+.|..+.++|||++|+++|+++++|+||++|++|.+++++|.|++.
T Consensus 526 ~~~l~~~~~~~e~~~~~~l~~lSl~~~~~~~~~~~~g~~~~~~gG~~~L~~aLa~~l~I~Lnt~V~~I~~~~~gV~V~~~ 605 (852)
T 2xag_A 526 RQILDWHFANLEFANATPLSTLSLKHWDQDDDFEFTGSHLTVRNGYSCVPVALAEGLDIKLNTAVRQVRYTASGCEVIAV 605 (852)
T ss_dssp HHHHHHHHHHHHHHHTSCTTTBBTTTTTGGGGGCCBSCCEEETTCTTHHHHHHTTTCCEECSEEEEEEEEETTEEEEEEE
T ss_pred HHHHHHHHhhhcccccCChHhhhhhhhhhccccccCCceEEecCcHHHHHHHHHhCCCEEeCCeEEEEEEcCCcEEEEEe
Confidence 345555554444455778888998876643 234566888999999999999999999999999999999999999886
Q ss_pred C------CcEEEcCEEEEecChhhhhc--CCccccCCCcHHHHHHHhhcCCccccEEEEEcCCCCCCC-CCcceeecCCC
Q 017808 137 G------GKTFVADAVVVAVPLGVLKA--RTIKFEPRLPDWKEAAIDDLGVGIENKIIMHFDKVFWPN-VEFLGVVSDTS 207 (365)
Q Consensus 137 ~------g~~~~ad~VI~t~p~~~l~~--~~i~f~p~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~w~~-~~~~g~~~~~~ 207 (365)
+ |+++.||+||+|+|+++|++ ..|.|.|+||+.+.++|++++|+++.||+|.|+++||++ ..++|.+.+..
T Consensus 606 ~~~~~~~g~~i~AD~VIvTvPl~vLk~l~~~I~F~P~LP~~k~~AI~~l~~g~v~KV~L~F~~~fW~~~~~~fG~l~~~~ 685 (852)
T 2xag_A 606 NTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTT 685 (852)
T ss_dssp ESSSTTCEEEEEESEEEECCCHHHHHCSSCSSEEESCCCHHHHHHHHHSEECCCEEEEEECSSCCSCTTCCEEEECCSSS
T ss_pred ecccCCCCeEEECCEEEECCCHHHHHhhhcccccCCCCCHHHHHHHHcCCccceEEEEEEcCCcccCCCCCeeeeecccc
Confidence 5 56899999999999999987 347899999999999999999999999999999999964 56778764421
Q ss_pred ---CceeEeeeccCCCCCceEEEEecchhhHHHhcCCHHHHHHHHHHHHHHhcCC--CCCccEEEeccCCCCCCCCCcCC
Q 017808 208 ---YGCSYFLNLHKATGHCVLVYMPAGQLARDIEKMSDEAAANFAFTQLKKILPD--ASSPIQYLVSHWGTDANSLGSYS 282 (365)
Q Consensus 208 ---~~~~~~~~~~~~~g~~~l~~~~~g~~a~~~~~~~~~e~~~~~~~~L~~~~~~--~~~p~~~~~~~W~~~~~~~g~y~ 282 (365)
.....+++.. +.++|++|+.|..+..+..++++++++.++++|+++||. .++|..+.+++|.++||++|+|+
T Consensus 686 ~~~~~l~~~~~~~---~~pvLl~~v~G~~a~~l~~lsdeel~~~~l~~L~~ifG~~~~~~P~~~~vtrW~~dp~s~GsYs 762 (852)
T 2xag_A 686 ASRGELFLFWNLY---KAPILLALVAGEAAGIMENISDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYS 762 (852)
T ss_dssp TTTTTTCEEEECS---SSSEEEEEECHHHHHHGGGSCHHHHHHHHHHHHHHHHCTTTCCCCSEEEECCTTTCTTTSSSCE
T ss_pred CCCCceEEEecCC---CCCEEEEEecCcCHHHHhcCCHHHHHHHHHHHHHHHhCccccCCceEEEEEecCCCCCcCcccc
Confidence 1223334433 356899999999998999999999999999999999986 45799999999999999999999
Q ss_pred CCCCCCCHHHHHHHhCCC-------------CCEEEeccccCCCCcchhHHHHHHHHHHHHHHHHHHH
Q 017808 283 YDTVGKSHDLYERLRIPV-------------DNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVL 337 (365)
Q Consensus 283 ~~~~g~~~~~~~~l~~p~-------------~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l~ 337 (365)
+..+|+....++.+++|+ ++|||||++|+..|+|+||||+.||+|||++|++.+.
T Consensus 763 ~~~pG~~~~~~~~L~~P~~~~~~~p~~~~~~grL~FAGE~Ts~~~~gtveGAi~SG~RAA~~Il~~l~ 830 (852)
T 2xag_A 763 YVAAGSSGNDYDLMAQPITPGPSIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQFL 830 (852)
T ss_dssp ECBTTCCTTHHHHTTSCBCCCCSSTTCCCCCCCEEECSGGGCTTSTTSHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCcchhhHHHHhCccccccccccccCCCCcEEEEehhHhCCCCcCHHHHHHHHHHHHHHHHHHhh
Confidence 999998777778887775 6899999999998899999999999999999998875
No 3
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=100.00 E-value=8.3e-39 Score=323.42 Aligned_cols=332 Identities=28% Similarity=0.503 Sum_probs=260.4
Q ss_pred CcccCHHHHHHHHHHHHHHHHHHHHHHhh--CCCCCCHHHHHHHHHccCc---hhhhhhHHHHHHHHHHHhhhhhcCCCC
Q 017808 3 GNQVPQELVTKVGEAFESILKETDKVREE--HDEDMSIQRAISIVFDRRP---ELRLEGLAHKVLQWYLCRMEGWFAADA 77 (365)
Q Consensus 3 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~d~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~~~ 77 (365)
|..............+..+.+...+.+.. ...+.++.+++.+.+.+.. ........+..+.+....+....|..+
T Consensus 426 g~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~d~sl~~~~~~~~~~~l~~~gv~~~~l~~~~l~~~~~~l~~~~G~~l 505 (776)
T 4gut_A 426 GRITDPTIDKRMDFHFNALLDVVSEWRKDKTQLQDVPLGEKIEEIYKAFIKESGIQFSELEGQVLQFHLSNLEYACGSNL 505 (776)
T ss_dssp SCBCCHHHHHHHHHHHHHHHHHHHHHGGGCCGGGCCBHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHTSCT
T ss_pred CcccchhHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHhcCCCccchhHHHHHHHHHHHHHhcCCCh
Confidence 44555566666666677777666655432 2346677776554321100 011112233344443333555678889
Q ss_pred cccChhcccc---ccccCCCceeccCChHHHHHHHhccCCeecCceeEEEEecCCeeEEEEcCCcEEEcCEEEEecChhh
Q 017808 78 ETISLKSWDK---EELLPGGHGLMVRGYLPVINTLAKGLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGV 154 (365)
Q Consensus 78 ~~~S~~~~~~---~~~~~g~~~~~~gG~~~L~~~L~~~l~I~l~~~V~~I~~~~~~v~V~~~~g~~~~ad~VI~t~p~~~ 154 (365)
.++|+..+.. +....|....+.+|++.|+++|+++++|++|++|++|..++++|+|++.+|+++.||+||+|+|+++
T Consensus 506 ~~ls~~~~~~~~~~~~~~G~~~~~~~G~~~l~~aLa~gl~I~l~t~V~~I~~~~~~v~V~~~~G~~i~Ad~VIvA~P~~v 585 (776)
T 4gut_A 506 HQVSARSWDHNEFFAQFAGDHTLLTPGYSVIIEKLAEGLDIQLKSPVQCIDYSGDEVQVTTTDGTGYSAQKVLVTVPLAL 585 (776)
T ss_dssp TSBBTTTTTGGGGSCCCCSCEEECTTCTHHHHHHHHTTSCEESSCCEEEEECSSSSEEEEETTCCEEEESEEEECCCHHH
T ss_pred HHcChhhhhhhhhHHhcCCCeEEECChHHHHHHHHHhCCcEEcCCeeEEEEEcCCEEEEEECCCcEEEcCEEEECCCHHH
Confidence 9999887653 2234566778899999999999999999999999999999999999999998999999999999999
Q ss_pred hhcCCccccCCCcHHHHHHHhhcCCccccEEEEEcCCCCCCC----CCcceeecCCC---CceeEeeeccCCCCCceEEE
Q 017808 155 LKARTIKFEPRLPDWKEAAIDDLGVGIENKIIMHFDKVFWPN----VEFLGVVSDTS---YGCSYFLNLHKATGHCVLVY 227 (365)
Q Consensus 155 l~~~~i~f~p~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~w~~----~~~~g~~~~~~---~~~~~~~~~~~~~g~~~l~~ 227 (365)
|++..+.|.|+||+.+.+++++++++++.||++.|+++||++ ..++|.+.+.. .....+.+..+.++..+|++
T Consensus 586 L~~~~i~f~P~Lp~~~~~ai~~l~~g~~~KV~l~f~~~FW~~~~~g~~~fG~l~~~~~~~~~~~~~~d~~p~g~~~vL~~ 665 (776)
T 4gut_A 586 LQKGAIQFNPPLSEKKMKAINSLGAGIIEKIALQFPYRFWDSKVQGADFFGHVPPSASKRGLFAVFYDMDPQKKHSVLMS 665 (776)
T ss_dssp HHTTCSEEESCCCHHHHHHHHHEEEECCEEEEEECSSCTTHHHHTTCSEEEECCSSGGGTTEEEEEEESCTTSCSCEEEE
T ss_pred HhhcccccCCCCCHHHHHHHHhCCCeeEEEEEEecCcccccccCCCCceEEeecCCcCCCceEEEEecCCCCCCceEEEE
Confidence 987778899999999999999999999999999999999953 35666665421 12233444444444568999
Q ss_pred EecchhhHHHhcCCHHHHHHHHHHHHHHhcCC--CCCccEEEeccCCCCCCCCCcCCCCCCCCCHHHHHHHhCCC-CCEE
Q 017808 228 MPAGQLARDIEKMSDEAAANFAFTQLKKILPD--ASSPIQYLVSHWGTDANSLGSYSYDTVGKSHDLYERLRIPV-DNLF 304 (365)
Q Consensus 228 ~~~g~~a~~~~~~~~~e~~~~~~~~L~~~~~~--~~~p~~~~~~~W~~~~~~~g~y~~~~~g~~~~~~~~l~~p~-~~l~ 304 (365)
|+.|+.+..+..++++++++.++++|+++||. .+.|..+.+++|.++||++|+|++..+|.....++.+.+|+ ++||
T Consensus 666 ~i~G~~a~~l~~lsdeel~~~~l~~L~~ifg~~~~~~P~~~~vt~W~~dp~s~Gsys~~~~g~~~~~~~~L~~p~~grL~ 745 (776)
T 4gut_A 666 VIAGEAVASVRTLDDKQVLQQCMATLRELFKEQEVPDPTKYFVTRWSTDPWIQMAYSFVKTGGSGEAYDIIAEDIQGTVF 745 (776)
T ss_dssp EECTHHHHHHHTSCHHHHHHHHHHHHHHHTTTSCCCCCSEEEECCGGGCTTTCCSEEEEBTTCCTHHHHHHHCCBTTTEE
T ss_pred EecchhHHHHHcCCHHHHHHHHHHHHHHHhCcccccCcceEEEecCCCCCccCCCCCccCCCCchhHHHHHhCcCCCcEE
Confidence 99998888999999999999999999999985 56889999999999999999999888888767788899986 8999
Q ss_pred EeccccCCCCcchhHHHHHHHHHHHHHHHH
Q 017808 305 FAGEATSMSYPGSVHGAFSTGLMAAEDCRM 334 (365)
Q Consensus 305 ~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~ 334 (365)
||||+|+..++|+||||++||.|||++|++
T Consensus 746 FAGE~Ts~~~~gtveGAi~SG~RaA~~Ila 775 (776)
T 4gut_A 746 FAGEATNRHFPQTVTGAYLSGVREASKIAA 775 (776)
T ss_dssp ECSGGGCSSSCSSHHHHHHHHHHHHHHHHC
T ss_pred EEehhhcCCCCcCHHHHHHHHHHHHHHHHh
Confidence 999999998899999999999999999874
No 4
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=100.00 E-value=4e-37 Score=301.54 Aligned_cols=291 Identities=20% Similarity=0.268 Sum_probs=232.5
Q ss_pred CCCCHHHHHHHHHccCchhhhhhHHHHHHHHHHHh-hhhhcCCCCcccChhccccccc------------cCCCceeccC
Q 017808 34 EDMSIQRAISIVFDRRPELRLEGLAHKVLQWYLCR-MEGWFAADAETISLKSWDKEEL------------LPGGHGLMVR 100 (365)
Q Consensus 34 ~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~S~~~~~~~~~------------~~g~~~~~~g 100 (365)
.++|+.+++.+.+.+ . .++.++.+ ..+.++.+++++|+..+..+.. ..+...++.|
T Consensus 144 ~~~s~~~~l~~~~~~-------~----~~~~~~~~~~~~~~g~~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g 212 (520)
T 1s3e_A 144 DNMTMKELLDKLCWT-------E----SAKQLATLFVNLCVTAETHEVSALWFLWYVKQCGGTTRIISTTNGGQERKFVG 212 (520)
T ss_dssp HTSBHHHHHHHHCSS-------H----HHHHHHHHHHHHHHSSCTTTSBHHHHHHHHHTTTCHHHHHCSTTSTTSEEETT
T ss_pred hccCHHHHHHhhCCC-------H----HHHHHHHHHHhhhcCCChHHhHHHHHHHHHhhcCchhhhcccCCCcceEEEeC
Confidence 357888888765321 1 22333343 4567899999999987542111 1123568899
Q ss_pred ChHHHHHHHhc--cCCeecCceeEEEEecCCeeEEEEcCCcEEEcCEEEEecChhhhhcCCccccCCCcHHHHHHHhhcC
Q 017808 101 GYLPVINTLAK--GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRLPDWKEAAIDDLG 178 (365)
Q Consensus 101 G~~~L~~~L~~--~l~I~l~~~V~~I~~~~~~v~V~~~~g~~~~ad~VI~t~p~~~l~~~~i~f~p~Lp~~~~~ai~~~~ 178 (365)
|+++|+++|++ +.+|++|++|++|..++++|.|++.+|+++.||+||+|+|+.+++ .+.|.|+||+.+.+++++++
T Consensus 213 G~~~l~~~l~~~lg~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~l~--~l~~~p~lp~~~~~~i~~~~ 290 (520)
T 1s3e_A 213 GSGQVSERIMDLLGDRVKLERPVIYIDQTRENVLVETLNHEMYEAKYVISAIPPTLGM--KIHFNPPLPMMRNQMITRVP 290 (520)
T ss_dssp CTHHHHHHHHHHHGGGEESSCCEEEEECSSSSEEEEETTSCEEEESEEEECSCGGGGG--GSEEESCCCHHHHHHTTSCC
T ss_pred CHHHHHHHHHHHcCCcEEcCCeeEEEEECCCeEEEEECCCeEEEeCEEEECCCHHHHc--ceeeCCCCCHHHHHHHHhCC
Confidence 99999999998 558999999999999989999999999999999999999999987 45689999999999999999
Q ss_pred CccccEEEEEcCCCCCCCCCcceeec--CCCC-ceeEeeeccCCCCCceEEEEecchhhHHHhcCCHHHHHHHHHHHHHH
Q 017808 179 VGIENKIIMHFDKVFWPNVEFLGVVS--DTSY-GCSYFLNLHKATGHCVLVYMPAGQLARDIEKMSDEAAANFAFTQLKK 255 (365)
Q Consensus 179 ~~~~~kv~l~~~~~~w~~~~~~g~~~--~~~~-~~~~~~~~~~~~g~~~l~~~~~g~~a~~~~~~~~~e~~~~~~~~L~~ 255 (365)
|+++.|+++.|+++||++..+.|.+. +... ....++...++++.++|++|+.+..+..|..++++++.+.++++|++
T Consensus 291 ~~~~~kv~l~~~~~~w~~~~~~g~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~a~~~~~~~~~e~~~~vl~~L~~ 370 (520)
T 1s3e_A 291 LGSVIKCIVYYKEPFWRKKDYCGTMIIDGEEAPVAYTLDDTKPEGNYAAIMGFILAHKARKLARLTKEERLKKLCELYAK 370 (520)
T ss_dssp BCCEEEEEEECSSCGGGGGTEEEEEEECSTTCSCSEEEECCCTTSCSCEEEEEEETHHHHHHTTSCHHHHHHHHHHHHHH
T ss_pred CcceEEEEEEeCCCcccCCCCCceeeccCCCCceEEEeeCCCCCCCCCEEEEEccchhhhhhhcCCHHHHHHHHHHHHHH
Confidence 99999999999999996555555432 2222 22233333333345789999988888889999999999999999999
Q ss_pred hcCC--CCCccEEEeccCCCCCCCCCcCC-CCCCCCCHHHHHHHhCCCCCEEEeccccCCCCcchhHHHHHHHHHHHHHH
Q 017808 256 ILPD--ASSPIQYLVSHWGTDANSLGSYS-YDTVGKSHDLYERLRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDC 332 (365)
Q Consensus 256 ~~~~--~~~p~~~~~~~W~~~~~~~g~y~-~~~~g~~~~~~~~l~~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i 332 (365)
+||. ...|..+..++|.+++|+.|+|+ +..+|+.....+.+++|++||||||++++..|+|+|+||+.||++||++|
T Consensus 371 ~~~~~~~~~p~~~~~~~W~~~~~~~G~~~~~~~~g~~~~~~~~l~~p~~~L~fAG~~t~~~~~g~v~GAi~SG~~aA~~i 450 (520)
T 1s3e_A 371 VLGSLEALEPVHYEEKNWCEEQYSGGCYTTYFPPGILTQYGRVLRQPVDRIYFAGTETATHWSGYMEGAVEAGERAAREI 450 (520)
T ss_dssp HHTCGGGGCCSEEEEEEGGGCTTTCSSSCBCCCTTHHHHHGGGTTCCBTTEEECSGGGCSSSTTSHHHHHHHHHHHHHHH
T ss_pred HhCccccCCccEEEEEeeCCCCCCCCCCccccCCCccccchHHHhCCCCCEEEeehhhcCcCcEEhHHHHHHHHHHHHHH
Confidence 9985 35789999999999999999998 77787654444567889999999999998878899999999999999999
Q ss_pred HHHHH
Q 017808 333 RMRVL 337 (365)
Q Consensus 333 ~~~l~ 337 (365)
++.+.
T Consensus 451 ~~~l~ 455 (520)
T 1s3e_A 451 LHAMG 455 (520)
T ss_dssp HHHTT
T ss_pred HHHHh
Confidence 98764
No 5
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=100.00 E-value=2.9e-36 Score=295.10 Aligned_cols=304 Identities=25% Similarity=0.362 Sum_probs=222.4
Q ss_pred CCCCCHHHHHHHHHccCchhhhhhHHHHHHHHHHHhhhhhcCCCCcccChhccccccccCCCceeccCChHHHHHHHhcc
Q 017808 33 DEDMSIQRAISIVFDRRPELRLEGLAHKVLQWYLCRMEGWFAADAETISLKSWDKEELLPGGHGLMVRGYLPVINTLAKG 112 (365)
Q Consensus 33 ~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~S~~~~~~~~~~~g~~~~~~gG~~~L~~~L~~~ 112 (365)
..|+|+.+++.+++.+... .........+..++..+..++|.+++++|+.++... ..+...++.+ +++|+++|++.
T Consensus 136 ~~d~s~~~~l~~~l~~~~~-~l~~~~~~~~~~~~~~~~~~~g~~~~~~s~~~~~~~--~~~~~~~~~g-~~~l~~~l~~~ 211 (516)
T 1rsg_A 136 VSDCSFFQLVMKYLLQRRQ-FLTNDQIRYLPQLCRYLELWHGLDWKLLSAKDTYFG--HQGRNAFALN-YDSVVQRIAQS 211 (516)
T ss_dssp --CCBHHHHHHHHHHHHGG-GSCHHHHHHHHHHHGGGHHHHTBCTTTSBHHHHCCC--CSSCCEEESC-HHHHHHHHHTT
T ss_pred CCCCCHHHHHHHHHHHhhc-ccCHHHHHHHHHHHHHHHHHhCCChHHCChHHHHhh--ccCcchhhhC-HHHHHHHHHHh
Confidence 3578999998876533110 000111122222333344557888999998775422 3344556666 99999999998
Q ss_pred C---CeecCceeEEEEec-CCeeEEEEcCCcEEEcCEEEEecChhhhhcC---------CccccCCCcHHHHHHHhhcCC
Q 017808 113 L---DIRLGHRVTKITRH-YIGVKVTVEGGKTFVADAVVVAVPLGVLKAR---------TIKFEPRLPDWKEAAIDDLGV 179 (365)
Q Consensus 113 l---~I~l~~~V~~I~~~-~~~v~V~~~~g~~~~ad~VI~t~p~~~l~~~---------~i~f~p~Lp~~~~~ai~~~~~ 179 (365)
+ +|++|++|++|.++ +++|.|++.+|+++.||+||+|+|+++|+.. .+.|.|+||+.+.+++++++|
T Consensus 212 l~~~~i~~~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~p~~~l~~~~~~~~~~~~~i~f~P~Lp~~~~~ai~~~~~ 291 (516)
T 1rsg_A 212 FPQNWLKLSCEVKSITREPSKNVTVNCEDGTVYNADYVIITVPQSVLNLSVQPEKNLRGRIEFQPPLKPVIQDAFDKIHF 291 (516)
T ss_dssp SCGGGEETTCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCCHHHHHGGGSSCSCSTTCCEEESCCCHHHHHHTTSSCC
T ss_pred CCCCEEEECCEEEEEEEcCCCeEEEEECCCcEEECCEEEECCCHHHhhhccccccccccceEecCCCCHHHHHHHHhCCC
Confidence 7 49999999999986 6779999999988999999999999999753 478999999999999999999
Q ss_pred ccccEEEEEcCCCCCCCC-CcceeecCCC-------------------------------Cc---eeEeeeccCCCCCce
Q 017808 180 GIENKIIMHFDKVFWPNV-EFLGVVSDTS-------------------------------YG---CSYFLNLHKATGHCV 224 (365)
Q Consensus 180 ~~~~kv~l~~~~~~w~~~-~~~g~~~~~~-------------------------------~~---~~~~~~~~~~~g~~~ 224 (365)
+++.||++.|+++||++. ..+..+.... .. ...+.+.....+.++
T Consensus 292 ~~~~Kv~l~f~~~fW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (516)
T 1rsg_A 292 GALGKVIFEFEECCWSNESSKIVTLANSTNEFVEIVRNAENLDELDSMLEREDSQKHTSVTCWSQPLFFVNLSKSTGVAS 371 (516)
T ss_dssp CCCEEEEEEESSCCSCCSCSEEEECCCCCHHHHHHHHHCCSHHHHHHHC---------CCCTTSSCEEEEEHHHHTSCSE
T ss_pred CcceEEEEEeCCCCCCCCCCcEEEeCCCCccchhhcccCcccchhhhcccccccccccccccccCceeEEEeeecCCCcE
Confidence 999999999999999643 2222222100 00 011223233446678
Q ss_pred EEEEecchhhHHHhcC--CHHHHHHH---HHHHHHHhcC------CCC---------Ccc--EEEeccCCCCCCCCCcCC
Q 017808 225 LVYMPAGQLARDIEKM--SDEAAANF---AFTQLKKILP------DAS---------SPI--QYLVSHWGTDANSLGSYS 282 (365)
Q Consensus 225 l~~~~~g~~a~~~~~~--~~~e~~~~---~~~~L~~~~~------~~~---------~p~--~~~~~~W~~~~~~~g~y~ 282 (365)
|++|+.|+.+..++.+ +++++.+. ++++|.++|| +.. .|. .+..++|.+|||++|+|+
T Consensus 372 L~~~~~g~~a~~~~~l~~~~~~~~~~~~~~l~~l~~~~g~~~~~~~~~~~~~~~~a~~p~~~~~~~~~W~~dp~~~Gsys 451 (516)
T 1rsg_A 372 FMMLMQAPLTNHIESIREDKERLFSFFQPVLNKIMKCLDSEDVIDGMRPIENIANANKPVLRNIIVSNWTRDPYSRGAYS 451 (516)
T ss_dssp EEEEECBTHHHHHHHTTTCHHHHHHHHHHHHHHHHHHTTCCCCEECCC-------CCSCEEEEEEECCTTTCTTTTTCCC
T ss_pred EEEEecchHHHHHHhcCCCHHHHHHHHHHHHHHHHhhccccccccCCCCcccccccCCCccceEEEecCCCCCCCCccCC
Confidence 9999999999889888 88887654 6666666665 222 254 888999999999999999
Q ss_pred CCCCCCCH-HHHHHHh-CCCCCEEEeccccCCCCcchhHHHHHHHHHHHHHHHHHHHHHh
Q 017808 283 YDTVGKSH-DLYERLR-IPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVLERY 340 (365)
Q Consensus 283 ~~~~g~~~-~~~~~l~-~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l~~~~ 340 (365)
+..||... ...+.+. .|.++||||||+|+..++||||||++||+|||++|++.+..+.
T Consensus 452 ~~~~g~~~~~~~~~l~~~~~~rl~FAGe~ts~~~~g~v~GA~~SG~raA~~i~~~~~~~~ 511 (516)
T 1rsg_A 452 ACFPGDDPVDMVVAMSNGQDSRIRFAGEHTIMDGAGCAYGAWESGRREATRISDLLKLEH 511 (516)
T ss_dssp CCBC----CHHHHHHHHCSSSSEEECSTTSCSTTBTSHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred CcCCCCCHHHHHHHhccCCCCcEEEeccccccCCCccchhHHHHHHHHHHHHHHHhhhhh
Confidence 98888743 3456665 4678999999999998899999999999999999999886553
No 6
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=100.00 E-value=6.1e-37 Score=295.20 Aligned_cols=288 Identities=20% Similarity=0.234 Sum_probs=226.1
Q ss_pred CCCHHHHHHHHHccCchhhhhhHHHHHHHHHHHh-hhhhcCCCCc-ccChhcccccccc-----------CCCceeccCC
Q 017808 35 DMSIQRAISIVFDRRPELRLEGLAHKVLQWYLCR-MEGWFAADAE-TISLKSWDKEELL-----------PGGHGLMVRG 101 (365)
Q Consensus 35 d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~-~~S~~~~~~~~~~-----------~g~~~~~~gG 101 (365)
++|+.+++.+.+.+ . .+..++.+ +.+.++.+++ ++|+..+...... .+..++++||
T Consensus 145 ~~s~~~~l~~~~~~-------~----~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gG 213 (453)
T 2yg5_A 145 TVSFKQWLINQSDD-------A----EARDNIGLFIAGGMLTKPAHSFSALQAVLMAASAGSFSHLVDEDFILDKRVIGG 213 (453)
T ss_dssp SSBHHHHHHHHCSC-------H----HHHHHHHHHHCCCCCCSCTTSSBHHHHHHHHHHTTCHHHHHCHHHHTCEEETTC
T ss_pred hccHHHHHHhhcCC-------H----HHHHHHHHHHHhhcccCCcccccHHHHHHHhccCCcHhhhccCCCcceEEEcCC
Confidence 67888888765421 1 22223343 4567888998 9999875421111 1124678999
Q ss_pred hHHHHHHHhccC--CeecCceeEEEEecCCe-eEEEEcCCcEEEcCEEEEecChhhhhcCCccccCCCcHHHHHHHhhcC
Q 017808 102 YLPVINTLAKGL--DIRLGHRVTKITRHYIG-VKVTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRLPDWKEAAIDDLG 178 (365)
Q Consensus 102 ~~~L~~~L~~~l--~I~l~~~V~~I~~~~~~-v~V~~~~g~~~~ad~VI~t~p~~~l~~~~i~f~p~Lp~~~~~ai~~~~ 178 (365)
+++|+++|++.+ +|++|++|++|..++++ |.|++ +|+++.||+||+|+|+.+++ .+.|.|+||+.+.+++++++
T Consensus 214 ~~~l~~~l~~~lg~~i~~~~~V~~i~~~~~~~v~v~~-~~~~~~ad~VI~a~p~~~~~--~l~~~p~lp~~~~~~i~~~~ 290 (453)
T 2yg5_A 214 MQQVSIRMAEALGDDVFLNAPVRTVKWNESGATVLAD-GDIRVEASRVILAVPPNLYS--RISYDPPLPRRQHQMHQHQS 290 (453)
T ss_dssp THHHHHHHHHHHGGGEECSCCEEEEEEETTEEEEEET-TTEEEEEEEEEECSCGGGGG--GSEEESCCCHHHHHHGGGEE
T ss_pred hHHHHHHHHHhcCCcEEcCCceEEEEEeCCceEEEEE-CCeEEEcCEEEEcCCHHHHh--cCEeCCCCCHHHHHHHhcCC
Confidence 999999999855 89999999999999888 98887 67789999999999999987 45688999999999999999
Q ss_pred CccccEEEEEcCCCCCCCCCcceeecCCCC-ceeEeeeccCCCCCceEEEEecchhhHHHhcCCHHHHHHHHHHHHHHhc
Q 017808 179 VGIENKIIMHFDKVFWPNVEFLGVVSDTSY-GCSYFLNLHKATGHCVLVYMPAGQLARDIEKMSDEAAANFAFTQLKKIL 257 (365)
Q Consensus 179 ~~~~~kv~l~~~~~~w~~~~~~g~~~~~~~-~~~~~~~~~~~~g~~~l~~~~~g~~a~~~~~~~~~e~~~~~~~~L~~~~ 257 (365)
++++.|+++.|+++||++..+.|.+..... ....+++..+..+.++|++++.++.+..|..++++++++.++++|+++|
T Consensus 291 ~~~~~kv~l~~~~~~w~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~~ 370 (453)
T 2yg5_A 291 LGLVIKVHAVYETPFWREDGLSGTGFGASEVVQEVYDNTNHEDDRGTLVAFVSDEKADAMFELSAEERKATILASLARYL 370 (453)
T ss_dssp ECCEEEEEEEESSCGGGGGTEEEEEECTTSSSCEEEECCCTTCSSEEEEEEEEHHHHHHHHHSCHHHHHHHHHHHHHHHH
T ss_pred CcceEEEEEEECCCCCCCCCCCceeecCCCCeEEEEeCCCCCCCCCEEEEEeccHHHHHHhcCCHHHHHHHHHHHHHHHh
Confidence 999999999999999965444555432222 2223333322223568889998888888989999999999999999999
Q ss_pred CC-CCCccEEEeccCCCCCCCCCcCC-CCCCCCCHHHHHHHhCCCCCEEEeccccCCCCcchhHHHHHHHHHHHHHHHHH
Q 017808 258 PD-ASSPIQYLVSHWGTDANSLGSYS-YDTVGKSHDLYERLRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMR 335 (365)
Q Consensus 258 ~~-~~~p~~~~~~~W~~~~~~~g~y~-~~~~g~~~~~~~~l~~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~~ 335 (365)
|. ..+|..+..++|.+++|++|+|+ ...+|......+.+.+|++||||||++++..++|+|+||+.||++||++|++.
T Consensus 371 ~~~~~~p~~~~~~~W~~~~~~~G~~~~~~~~g~~~~~~~~~~~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~~ 450 (453)
T 2yg5_A 371 GPKAEEPVVYYESDWGSEEWTRGCYAASFDLGGLHRYGADSRTPVGPIHFSCSDIAAEGYQHVDGAVRMGQRTAADIIAR 450 (453)
T ss_dssp CGGGGCCSEEEECCTTTCTTTCSSSCEEECTTHHHHHGGGTTCCBTTEEECCGGGCSTTTTSHHHHHHHHHHHHHHHHHH
T ss_pred CccCCCccEEEEeecCCCCCCCCCCcCcCCCCccccchHHHhCCcCceEEeecccccccccchHHHHHHHHHHHHHHHHH
Confidence 85 45788999999999999999986 55677543344467889999999999999878899999999999999999875
Q ss_pred H
Q 017808 336 V 336 (365)
Q Consensus 336 l 336 (365)
+
T Consensus 451 l 451 (453)
T 2yg5_A 451 S 451 (453)
T ss_dssp C
T ss_pred h
Confidence 4
No 7
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=100.00 E-value=2.5e-34 Score=278.38 Aligned_cols=267 Identities=29% Similarity=0.428 Sum_probs=213.1
Q ss_pred hcCCCCcccChhccccc---cccCCCcee--ccCChHHHHHHHhccC-------------CeecCceeEEEEecCCeeEE
Q 017808 72 WFAADAETISLKSWDKE---ELLPGGHGL--MVRGYLPVINTLAKGL-------------DIRLGHRVTKITRHYIGVKV 133 (365)
Q Consensus 72 ~~g~~~~~~S~~~~~~~---~~~~g~~~~--~~gG~~~L~~~L~~~l-------------~I~l~~~V~~I~~~~~~v~V 133 (365)
.++.+++.+|+..+... ....+..++ +.||+++|+++|++.+ +|++|++|++|..++++|.|
T Consensus 170 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~~~v~v 249 (472)
T 1b37_A 170 EFAEPPRVTSLQNTVPLATFSDFGDDVYFVADQRGYEAVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSPGGVTV 249 (472)
T ss_dssp HHSSCGGGBBSTTTSSCHHHHHHCSEEEEECCTTCTTHHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEECSSCEEE
T ss_pred hhcccccccchhhccccccccccCCceeeeecCCcHHHHHHHHHHhccccccccccccccEEEcCCEEEEEEEcCCcEEE
Confidence 35677777777554311 111222233 3799999999998753 69999999999999999999
Q ss_pred EEcCCcEEEcCEEEEecChhhhhcCCccccCCCcHHHHHHHhhcCCccccEEEEEcCCCCCCCCCcceeec--CCCC-ce
Q 017808 134 TVEGGKTFVADAVVVAVPLGVLKARTIKFEPRLPDWKEAAIDDLGVGIENKIIMHFDKVFWPNVEFLGVVS--DTSY-GC 210 (365)
Q Consensus 134 ~~~~g~~~~ad~VI~t~p~~~l~~~~i~f~p~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~w~~~~~~g~~~--~~~~-~~ 210 (365)
++.+|+++.||+||+|+|+.+++...+.|.|+||+.+.+++++++|+++.||++.|+++||++....+++. +... ..
T Consensus 250 ~~~~g~~~~ad~vI~a~~~~~l~~~~~~~~p~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~w~~~~~~~~~~~~~~~~~~~ 329 (472)
T 1b37_A 250 KTEDNSVYSADYVMVSASLGVLQSDLIQFKPKLPTWKVRAIYQFDMAVYTKIFLKFPRKFWPEGKGREFFLYASSRRGYY 329 (472)
T ss_dssp EETTSCEEEESEEEECSCHHHHHTTSSEEESCCCHHHHHHHHHSEEECEEEEEEECSSCCSCCSTTCSEEEECCSSTTSS
T ss_pred EECCCCEEEcCEEEEecCHHHhccCCeeECCCCCHHHHHHHHhcCCcceeEEEEECCCcCCCCCCCcceEEecccCCccc
Confidence 99999899999999999999998776779999999999999999999999999999999996522222221 1111 11
Q ss_pred eEeeecc-CCCCCceEEEEecchhhHHHhcCCHHHHHHHHHHHHHHhcCC--CCCccEEEeccCCCCCCCCCcCCCCCCC
Q 017808 211 SYFLNLH-KATGHCVLVYMPAGQLARDIEKMSDEAAANFAFTQLKKILPD--ASSPIQYLVSHWGTDANSLGSYSYDTVG 287 (365)
Q Consensus 211 ~~~~~~~-~~~g~~~l~~~~~g~~a~~~~~~~~~e~~~~~~~~L~~~~~~--~~~p~~~~~~~W~~~~~~~g~y~~~~~g 287 (365)
..+.... ...+.++|++++.++.+..|..++++++.+.++++|++++|+ .++|+.+.+++|.+++|+.|+|+...+|
T Consensus 330 ~~~~~~~~~~p~~~~l~~~~~~~~a~~~~~~~~~e~~~~~l~~L~~~~Pg~~~~~~~~~~~~~W~~~~~~~G~~~~~~~g 409 (472)
T 1b37_A 330 GVWQEFEKQYPDANVLLVTVTDEESRRIEQQSDEQTKAEIMQVLRKMFPGKDVPDATDILVPRWWSDRFYKGTFSNWPVG 409 (472)
T ss_dssp CEEEECTTTSTTCCEEEEEEEHHHHHHHHTSCHHHHHHHHHHHHHHHCTTSCCCCCSEEECCCTTTCTTTSSSEEECBTT
T ss_pred eeeecccCCCCCCCEEEEEechHHHHHHHhCCHHHHHHHHHHHHHHHcCCCCCCCCceEEecccCCCCCCCcccCCCCCC
Confidence 2222211 122456788888776677788899999999999999999964 4678888899999999999999987888
Q ss_pred CCHHHHHHHhCCCCCEEEeccccCCCCcchhHHHHHHHHHHHHHHHHHHHH
Q 017808 288 KSHDLYERLRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVLE 338 (365)
Q Consensus 288 ~~~~~~~~l~~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l~~ 338 (365)
+....++.+++|++||||||++|++.++|+|+||+.||++||++|++.+..
T Consensus 410 ~~~~~~~~l~~p~~~l~fAG~~t~~~~~g~v~GA~~SG~~aA~~i~~~l~~ 460 (472)
T 1b37_A 410 VNRYEYDQLRAPVGRVYFTGEHTSEHYNGYVHGAYLSGIDSAEILINCAQK 460 (472)
T ss_dssp CCHHHHHHHHCCBTTEEECSGGGCTTTTTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CChhHHHHHhccCCcEEEeecccCCCCCCchhHHHHHHHHHHHHHHHHHHh
Confidence 876667889999999999999999888899999999999999999988754
No 8
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=100.00 E-value=1.4e-34 Score=281.86 Aligned_cols=285 Identities=18% Similarity=0.219 Sum_probs=221.6
Q ss_pred CCCHHHHHHHHHccCchhhhhhHHHHHHHHHHHhhhhhcCCCCcccChhcccccccc----------CCCceeccCChHH
Q 017808 35 DMSIQRAISIVFDRRPELRLEGLAHKVLQWYLCRMEGWFAADAETISLKSWDKEELL----------PGGHGLMVRGYLP 104 (365)
Q Consensus 35 d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~S~~~~~~~~~~----------~g~~~~~~gG~~~ 104 (365)
++|+.+++.+.... .....+++++.+ +...++.+++++|+..+..+... ..+.+.++||++.
T Consensus 185 ~~s~~~~l~~~~~~-----~~~~~~~~~~~~---~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~ 256 (495)
T 2vvm_A 185 EMSYSERIDQIRDE-----LSLNERSSLEAF---ILLCSGGTLENSSFGEFLHWWAMSGYTYQGCMDCLMSYKFKDGQSA 256 (495)
T ss_dssp TSBHHHHHHHHGGG-----CCHHHHHHHHHH---HHHHHSSCTTTSBHHHHHHHHHHTTSSHHHHHHHHHSEEETTCHHH
T ss_pred hhhHHHHHHHhhcc-----CCHHHHHHHHHH---HHHhcCCCcchhhHHHHHHHHHHcCCCHHHHHhhhceEEeCCCHHH
Confidence 56888887754210 011222333322 45678899999999775422110 1235678999999
Q ss_pred HHHHHhcc------CCeecCceeEEEEecCCeeEEEEcCCcEEEcCEEEEecChhhhhcCCccccCCCcHHHHHHHhhcC
Q 017808 105 VINTLAKG------LDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRLPDWKEAAIDDLG 178 (365)
Q Consensus 105 L~~~L~~~------l~I~l~~~V~~I~~~~~~v~V~~~~g~~~~ad~VI~t~p~~~l~~~~i~f~p~Lp~~~~~ai~~~~ 178 (365)
|+++|++. ++|++|++|++|..++++|.|++.+|+++.||+||+|+|++++++ +.|.|+||+.+.++++.+.
T Consensus 257 l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~~~l~~--i~~~p~lp~~~~~ai~~~~ 334 (495)
T 2vvm_A 257 FARRFWEEAAGTGRLGYVFGCPVRSVVNERDAARVTARDGREFVAKRVVCTIPLNVLST--IQFSPALSTERISAMQAGH 334 (495)
T ss_dssp HHHHHHHHHHTTTCEEEESSCCEEEEEECSSSEEEEETTCCEEEEEEEEECCCGGGGGG--SEEESCCCHHHHHHHHHCC
T ss_pred HHHHHHHHhhhcCceEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCCHHHHhh--eeeCCCCCHHHHHHHHhcC
Confidence 99999874 459999999999998889999999998899999999999999974 5689999999999999999
Q ss_pred CccccEEEEEcCCCCCCCCCcceeecCCCCceeEeeeccCCCCCceEEEEecchhhHHHhcCCHHHHHHHHHHHHHHhcC
Q 017808 179 VGIENKIIMHFDKVFWPNVEFLGVVSDTSYGCSYFLNLHKATGHCVLVYMPAGQLARDIEKMSDEAAANFAFTQLKKILP 258 (365)
Q Consensus 179 ~~~~~kv~l~~~~~~w~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~l~~~~~g~~a~~~~~~~~~e~~~~~~~~L~~~~~ 258 (365)
|+++.||++.|++++|. .+.|...+.......+.+...+.+..+|++|+... + . +++++..+.++++|+++++
T Consensus 335 ~~~~~kv~l~~~~~~~~--~~~g~~~~~~~~~~~~~~~~~~~~~~vl~~~~~~~-~-~---~~~~e~~~~~~~~L~~~~~ 407 (495)
T 2vvm_A 335 VSMCTKVHAEVDNKDMR--SWTGIAYPFNKLCYAIGDGTTPAGNTHLVCFGNSA-N-H---IQPDEDVRETLKAVGQLAP 407 (495)
T ss_dssp CCCCEEEEEEESCGGGG--GEEEEECSSCSSCEEEEEEECTTSCEEEEEEECST-T-C---CCTTTCHHHHHHHHHTTST
T ss_pred CCceeEEEEEECCccCC--CceeEecCCCCcEEEecCCCCCCCCeEEEEEeCcc-c-c---CCCHHHHHHHHHHHHHhcC
Confidence 99999999999999984 44555443333333343434455667888876432 2 1 4556677889999999988
Q ss_pred CCCCccEEEeccCCCCCCCCCcCCCCCCCCCHHHHHHHhCCCCCEEEeccccCCCCcchhHHHHHHHHHHHHHHHHHH
Q 017808 259 DASSPIQYLVSHWGTDANSLGSYSYDTVGKSHDLYERLRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRV 336 (365)
Q Consensus 259 ~~~~p~~~~~~~W~~~~~~~g~y~~~~~g~~~~~~~~l~~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l 336 (365)
...+|..+..++|.++||++|+|++..+|......+.+.+|.++|||||++++..++|+||||++||++||++|++.+
T Consensus 408 ~~~~~~~~~~~~W~~dp~~~g~y~~~~~g~~~~~~~~l~~p~~~l~fAGe~t~~~~~g~veGAi~SG~raA~~i~~~l 485 (495)
T 2vvm_A 408 GTFGVKRLVFHNWVKDEFAKGAWFFSRPGMVSECLQGLREKHGGVVFANSDWALGWRSFIDGAIEEGTRAARVVLEEL 485 (495)
T ss_dssp TSCCEEEEEECCTTTCTTTSSSSCCCCTTHHHHHHHHHHCCBTTEEECCGGGCSSSTTSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCceEEEEeEcCCCCCCCCCccCcCCCcchhhHHHHhCcCCCEEEechhhhcCCceEEEhHHHHHHHHHHHHHHHh
Confidence 766788999999999999999999888987656678889999999999999998788999999999999999998776
No 9
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=100.00 E-value=4.8e-33 Score=266.23 Aligned_cols=305 Identities=19% Similarity=0.248 Sum_probs=227.0
Q ss_pred cCHHHHHHHHHHHHHHHHHHHHHHhhC--------CCCCCHHHHHHHHHccCchhhhhhHHHHHHHHHHHhhhhhcCCCC
Q 017808 6 VPQELVTKVGEAFESILKETDKVREEH--------DEDMSIQRAISIVFDRRPELRLEGLAHKVLQWYLCRMEGWFAADA 77 (365)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 77 (365)
++.+....+...+..+.....++.... ..|.|+.+++.+... ....+.++..+ ....++.++
T Consensus 103 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d~s~~~~l~~~~~-------~~~~~~~~~~~---~~~~~~~~~ 172 (431)
T 3k7m_X 103 IPGSEAVAVEAATYTLLRDAHRIDLEKGLENQDLEDLDIPLNEYVDKLDL-------PPVSRQFLLAW---AWNMLGQPA 172 (431)
T ss_dssp CCGGGHHHHHHHHHHHHHHHTTCCTTTCTTSSSCGGGCSBHHHHHHHHTC-------CHHHHHHHHHH---HHHHHSSCT
T ss_pred CCHHHHHHHHHHHHHHHHHHHhcCCCCCccCcchhhhcCCHHHHHHhcCC-------CHHHHHHHHHH---HHHhcCCCh
Confidence 456677777777777776654432111 124778887765321 12222233222 456688899
Q ss_pred cccChhccccccccC---------CCceeccCChHHHHHHHhccC-CeecCceeEEEEecCCeeEEEEcCCcEEEcCEEE
Q 017808 78 ETISLKSWDKEELLP---------GGHGLMVRGYLPVINTLAKGL-DIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVV 147 (365)
Q Consensus 78 ~~~S~~~~~~~~~~~---------g~~~~~~gG~~~L~~~L~~~l-~I~l~~~V~~I~~~~~~v~V~~~~g~~~~ad~VI 147 (365)
.++|+..+....... +....+.+|++.+++++++.+ +|++|++|++|+.++++|.|++.+|+++.||+||
T Consensus 173 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~g~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vi 252 (431)
T 3k7m_X 173 DQASALWMLQLVAAHHYSILGVVLSLDEVFSNGSADLVDAMSQEIPEIRLQTVVTGIDQSGDVVNVTVKDGHAFQAHSVI 252 (431)
T ss_dssp TTSBHHHHHHHHHHTTSCHHHHHHTCCEEETTCTHHHHHHHHTTCSCEESSCCEEEEECSSSSEEEEETTSCCEEEEEEE
T ss_pred hhhhHHHHHHHHHhcCCccceeecchhhhcCCcHHHHHHHHHhhCCceEeCCEEEEEEEcCCeEEEEECCCCEEEeCEEE
Confidence 999987654211111 112257999999999998855 8999999999999999999999999889999999
Q ss_pred EecChhhhhcCCccccCCCcHHHHHHHhhcCCccccEEEEEcCCCCCCCCCcceeecCCCCceeEeeeccCCCCCceEEE
Q 017808 148 VAVPLGVLKARTIKFEPRLPDWKEAAIDDLGVGIENKIIMHFDKVFWPNVEFLGVVSDTSYGCSYFLNLHKATGHCVLVY 227 (365)
Q Consensus 148 ~t~p~~~l~~~~i~f~p~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~w~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~l~~ 227 (365)
+|+|+++++ .+.|.|+||..+.++++.+.++...||.+.|+++|| ++++ ..+......+.......+..+|++
T Consensus 253 ~a~~~~~l~--~i~~~p~l~~~~~~~~~~~~~~~~~kv~~~~~~~~~---~i~~--~~d~~~~~~~~~~~~~~~~~~l~~ 325 (431)
T 3k7m_X 253 VATPMNTWR--RIVFTPALPERRRSVIEEGHGGQGLKILIHVRGAEA---GIEC--VGDGIFPTLYDYCEVSESERLLVA 325 (431)
T ss_dssp ECSCGGGGG--GSEEESCCCHHHHHHHHHCCCCCEEEEEEEEESCCT---TEEE--EBSSSSSEEEEEEECSSSEEEEEE
T ss_pred EecCcchHh--heeeCCCCCHHHHHHHHhCCCcceEEEEEEECCCCc---CceE--cCCCCEEEEEeCcCCCCCCeEEEE
Confidence 999999997 467999999999999999999999999999999975 2333 122112222322222244568888
Q ss_pred EecchhhHHHhcCCHHHHHHHHHHHHHHhcCCCCCccEEEeccCCCCCCCCCcCCCCCCCCCHHHHHHHhCCCCCEEEec
Q 017808 228 MPAGQLARDIEKMSDEAAANFAFTQLKKILPDASSPIQYLVSHWGTDANSLGSYSYDTVGKSHDLYERLRIPVDNLFFAG 307 (365)
Q Consensus 228 ~~~g~~a~~~~~~~~~e~~~~~~~~L~~~~~~~~~p~~~~~~~W~~~~~~~g~y~~~~~g~~~~~~~~l~~p~~~l~~aG 307 (365)
++.++. +...+. +.+.+.|+++++.. .|..+..++|.++||++|+|++..||+....++.+++|.++|||||
T Consensus 326 ~~~g~~---~~~~~~----~~~~~~l~~~~~~~-~~~~~~~~~W~~d~~~~G~~~~~~~g~~~~~~~~l~~p~g~~~fAG 397 (431)
T 3k7m_X 326 FTDSGS---FDPTDI----GAVKDAVLYYLPEV-EVLGIDYHDWIADPLFEGPWVAPRVGQFSRVHKELGEPAGRIHFVG 397 (431)
T ss_dssp EEETTT---CCTTCH----HHHHHHHHHHCTTC-EEEEEECCCTTTCTTTSSSSCCCCTTTTTTSSGGGGSCBTTEEECS
T ss_pred Eecccc---CCCCCH----HHHHHHHHHhcCCC-CccEeEecccCCCCCCCCCCCCcCCCCCcccHHHHhCCCCcEEEEe
Confidence 887754 333333 24667888888875 3888889999999999999999999987777888999999999999
Q ss_pred cccCCCCcchhHHHHHHHHHHHHHHHHH
Q 017808 308 EATSMSYPGSVHGAFSTGLMAAEDCRMR 335 (365)
Q Consensus 308 ~~~~~~~~g~v~gA~~SG~~aA~~i~~~ 335 (365)
++|+..|+|+||||++||+|||++|+..
T Consensus 398 e~t~~~~~g~~~GA~~sg~raa~~i~~~ 425 (431)
T 3k7m_X 398 SDVSLEFPGYIEGALETAECAVNAILHS 425 (431)
T ss_dssp GGGCSSSTTSHHHHHHHHHHHHHHHHHC
T ss_pred hhhhccCCeEehHHHHHHHHHHHHHHhh
Confidence 9999989999999999999999999864
No 10
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=100.00 E-value=3.4e-33 Score=272.28 Aligned_cols=242 Identities=21% Similarity=0.293 Sum_probs=198.3
Q ss_pred CCceeccCChHHHHHHHhccC--CeecCceeEEEEecCCeeEEEEcCCc----EEEcCEEEEecChhhhhcCCccccCCC
Q 017808 93 GGHGLMVRGYLPVINTLAKGL--DIRLGHRVTKITRHYIGVKVTVEGGK----TFVADAVVVAVPLGVLKARTIKFEPRL 166 (365)
Q Consensus 93 g~~~~~~gG~~~L~~~L~~~l--~I~l~~~V~~I~~~~~~v~V~~~~g~----~~~ad~VI~t~p~~~l~~~~i~f~p~L 166 (365)
...+++.||+++|+++|++.+ +|++|++|++|.+++++|.|++.+|+ ++.||+||+|+|+..+. .+.|.|+|
T Consensus 231 ~~~~~~~gG~~~l~~~l~~~l~~~i~~~~~V~~I~~~~~~v~v~~~~~~~~~~~~~ad~vI~t~p~~~~~--~i~f~p~L 308 (498)
T 2iid_A 231 KRFDEIVDGMDKLPTAMYRDIQDKVHFNAQVIKIQQNDQKVTVVYETLSKETPSVTADYVIVCTTSRAVR--LIKFNPPL 308 (498)
T ss_dssp CCEEEETTCTTHHHHHHHHHTGGGEESSCEEEEEEECSSCEEEEEECSSSCCCEEEESEEEECSCHHHHT--TSEEESCC
T ss_pred cceEEeCCcHHHHHHHHHHhcccccccCCEEEEEEECCCeEEEEEecCCcccceEEeCEEEECCChHHHh--heecCCCC
Confidence 345678999999999999987 79999999999999999999988775 48999999999999886 57789999
Q ss_pred cHHHHHHHhhcCCccccEEEEEcCCCCCCCCCcceee-c-CCCCceeEeeeccCCCCCceEEEEecchhhHHHhcCCHHH
Q 017808 167 PDWKEAAIDDLGVGIENKIIMHFDKVFWPNVEFLGVV-S-DTSYGCSYFLNLHKATGHCVLVYMPAGQLARDIEKMSDEA 244 (365)
Q Consensus 167 p~~~~~ai~~~~~~~~~kv~l~~~~~~w~~~~~~g~~-~-~~~~~~~~~~~~~~~~g~~~l~~~~~g~~a~~~~~~~~~e 244 (365)
|+.+.+++++++|+++.||++.|+++||++..+++.. . +......++.+...+.+.++|++|+.++.+..+..+++++
T Consensus 309 p~~~~~ai~~l~~~~~~kv~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~s~~~p~g~~~L~~~~~g~~a~~~~~~~~~~ 388 (498)
T 2iid_A 309 LPKKAHALRSVHYRSGTKIFLTCTTKFWEDDGIHGGKSTTDLPSRFIYYPNHNFTNGVGVIIAYGIGDDANFFQALDFKD 388 (498)
T ss_dssp CHHHHHHHHHCCEECEEEEEEEESSCGGGGGTCCSSEEEESSTTCEEECCSSCCTTSCEEEEEEEEHHHHHTTTTSCHHH
T ss_pred CHHHHHHHHhCCCcceeEEEEEeCCCCccCCCccCCcccCCCCcceEEECCCCCCCCCcEEEEEeCCccHhhhhcCCHHH
Confidence 9999999999999999999999999999653333322 1 1111222232322355677888898888888888999999
Q ss_pred HHHHHHHHHHHhcCCCCC-----ccEEEeccCCCCCCCCCcCCCCCCCCCHHHHHHHhCCCCCEEEeccccCCCCcchhH
Q 017808 245 AANFAFTQLKKILPDASS-----PIQYLVSHWGTDANSLGSYSYDTVGKSHDLYERLRIPVDNLFFAGEATSMSYPGSVH 319 (365)
Q Consensus 245 ~~~~~~~~L~~~~~~~~~-----p~~~~~~~W~~~~~~~g~y~~~~~g~~~~~~~~l~~p~~~l~~aG~~~~~~~~g~v~ 319 (365)
+.+.++++|+++++.... +..+..++|.++||+.|+|++..++......+.+.+|.+||||||++++.. .|+|+
T Consensus 389 ~~~~~l~~L~~~~g~~~~~~~~~~~~~~~~~W~~~p~~~G~~~~~~~~~~~~~~~~l~~p~~~l~fAGe~t~~~-~g~~~ 467 (498)
T 2iid_A 389 CADIVFNDLSLIHQLPKKDIQSFCYPSVIQKWSLDKYAMGGITTFTPYQFQHFSDPLTASQGRIYFAGEYTAQA-HGWID 467 (498)
T ss_dssp HHHHHHHHHHHHHTCCHHHHHHHEEEEEEEEGGGCTTTCSSEECCCTTHHHHHHHHHHCCBTTEEECSGGGSSS-SSCHH
T ss_pred HHHHHHHHHHHHcCCChhhhhhhcCccEEEecCCCCCCCceeeecCCcchHHHHHHHhCCCCcEEEEEcccccC-CcCHH
Confidence 999999999999973111 123677999999999999998888876556778899999999999999865 48999
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 017808 320 GAFSTGLMAAEDCRMRVL 337 (365)
Q Consensus 320 gA~~SG~~aA~~i~~~l~ 337 (365)
||+.||++||++|++.+.
T Consensus 468 GAi~SG~raA~~i~~~l~ 485 (498)
T 2iid_A 468 STIKSGLRAARDVNLASE 485 (498)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhc
Confidence 999999999999998874
No 11
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=99.97 E-value=7.3e-31 Score=255.18 Aligned_cols=239 Identities=19% Similarity=0.272 Sum_probs=191.7
Q ss_pred CceeccCChHHHHHHHhccC---CeecCceeEEEEecCCeeEEEEcCC---cEEEcCEEEEecChhhhhcCCccccCCCc
Q 017808 94 GHGLMVRGYLPVINTLAKGL---DIRLGHRVTKITRHYIGVKVTVEGG---KTFVADAVVVAVPLGVLKARTIKFEPRLP 167 (365)
Q Consensus 94 ~~~~~~gG~~~L~~~L~~~l---~I~l~~~V~~I~~~~~~v~V~~~~g---~~~~ad~VI~t~p~~~l~~~~i~f~p~Lp 167 (365)
+.++++||+++|+++|++.+ +|++|++|++|..++++|.|++.+| +++.||+||+|+|+.+++. +.+ +||
T Consensus 230 ~~~~~~gG~~~l~~~l~~~l~~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~~~~ad~vI~a~p~~~l~~--l~~--~l~ 305 (489)
T 2jae_A 230 MMFTPVGGMDRIYYAFQDRIGTDNIVFGAEVTSMKNVSEGVTVEYTAGGSKKSITADYAICTIPPHLVGR--LQN--NLP 305 (489)
T ss_dssp SEEEETTCTTHHHHHHHHHHCGGGEETTCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCHHHHTT--SEE--CCC
T ss_pred cEEeecCCHHHHHHHHHHhcCCCeEEECCEEEEEEEcCCeEEEEEecCCeEEEEECCEEEECCCHHHHHh--Ccc--CCC
Confidence 46678999999999999876 4999999999999999999998887 6899999999999999874 444 689
Q ss_pred HHHHHHHhhcCCccccEEEEEcCCCCCCCC-Ccceeec-CCCCceeEeeeccC-CCCCceEE-EEecchhhHHHhcCCHH
Q 017808 168 DWKEAAIDDLGVGIENKIIMHFDKVFWPNV-EFLGVVS-DTSYGCSYFLNLHK-ATGHCVLV-YMPAGQLARDIEKMSDE 243 (365)
Q Consensus 168 ~~~~~ai~~~~~~~~~kv~l~~~~~~w~~~-~~~g~~~-~~~~~~~~~~~~~~-~~g~~~l~-~~~~g~~a~~~~~~~~~ 243 (365)
+.+.+++++++|+++.|+++.|+++||++. .++|.+. +.......+++... +...++|+ .|+.++.+..|..++++
T Consensus 306 ~~~~~~l~~~~~~~~~kv~l~~~~~~w~~~~~~~g~~~~~~~~~~~~~~~s~~~~~~~~~l~~~~~~g~~~~~~~~~~~~ 385 (489)
T 2jae_A 306 GDVLTALKAAKPSSSGKLGIEYSRRWWETEDRIYGGASNTDKDISQIMFPYDHYNSDRGVVVAYYSSGKRQEAFESLTHR 385 (489)
T ss_dssp HHHHHHHHTEECCCEEEEEEEESSCHHHHTTCCCSCEEEESSTTCEEECCSSSTTSSCEEEEEEEEETHHHHHHHTSCHH
T ss_pred HHHHHHHHhCCCccceEEEEEeCCCCccCCCCcccccccCCCCceEEEeCCCCCCCCCCEEEEEeeCCchhhhhhcCCHH
Confidence 999999999999999999999999999533 5554332 22112222222211 11234554 58888888889999999
Q ss_pred HHHHHHHHHHHHhcCC--CCCccEEEeccCCCCCCCCCcCCCCC------CCCCHHHHHHHhCCCCCEEEeccccCCCCc
Q 017808 244 AAANFAFTQLKKILPD--ASSPIQYLVSHWGTDANSLGSYSYDT------VGKSHDLYERLRIPVDNLFFAGEATSMSYP 315 (365)
Q Consensus 244 e~~~~~~~~L~~~~~~--~~~p~~~~~~~W~~~~~~~g~y~~~~------~g~~~~~~~~l~~p~~~l~~aG~~~~~~~~ 315 (365)
++.+.++++|++++|. ..++.....++|.+++|+.|+|+... ++.....++.+.+|.+||||||++++. ++
T Consensus 386 ~~~~~~l~~L~~~~~~~~~~~~~~~~~~~W~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~faG~~~~~-~~ 464 (489)
T 2jae_A 386 QRLAKAIAEGSEIHGEKYTRDISSSFSGSWRRTKYSESAWANWAGSGGSHGGAATPEYEKLLEPVDKIYFAGDHLSN-AI 464 (489)
T ss_dssp HHHHHHHHHHHHHHCGGGGSSEEEEEEEEGGGSTTTSCSSCEETTC-------CCHHHHHHTSCBTTEEECSGGGBS-ST
T ss_pred HHHHHHHHHHHHHcCcchhhhccccEEEEcCCCCCCCCcchhcccccCCCcccchhhHHHHhCCCCcEEEeEHHhcc-Cc
Confidence 9999999999999986 35677777889999999999998665 776556678888999999999999975 57
Q ss_pred chhHHHHHHHHHHHHHHHHHHH
Q 017808 316 GSVHGAFSTGLMAAEDCRMRVL 337 (365)
Q Consensus 316 g~v~gA~~SG~~aA~~i~~~l~ 337 (365)
++++||+.||+++|++|++.+.
T Consensus 465 ~~v~gAi~sg~~aA~~i~~~l~ 486 (489)
T 2jae_A 465 AWQHGALTSARDVVTHIHERVA 486 (489)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHh
Confidence 8999999999999999998765
No 12
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.97 E-value=2.1e-29 Score=243.34 Aligned_cols=278 Identities=19% Similarity=0.249 Sum_probs=210.7
Q ss_pred CCCCCHHHHHHHHHccCchhhhhhHHHHHHHHHHHh-hhhhcCCCCcccChhcccccc-c--------c-----------
Q 017808 33 DEDMSIQRAISIVFDRRPELRLEGLAHKVLQWYLCR-MEGWFAADAETISLKSWDKEE-L--------L----------- 91 (365)
Q Consensus 33 ~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~S~~~~~~~~-~--------~----------- 91 (365)
..+.|+.+++.+. ++.++.+.++.+ +.++|+.+++++|+....... . .
T Consensus 147 ~~~~s~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (470)
T 3i6d_A 147 KDDQSLGEFFRRR-----------VGDEVVENLIEPLLSGIYAGDIDKLSLMSTFPQFYQTEQKHRSLILGMKKTRPQGS 215 (470)
T ss_dssp SSCCBHHHHHHHH-----------SCHHHHHHTHHHHHHHTTCSCTTTBBHHHHCGGGCC--------------------
T ss_pred CCCcCHHHHHHHh-----------cCHHHHHHhccchhcEEecCCHHHhhHHHHHHHHHHHHHhcCcHHHHHHhhccccc
Confidence 3578899988763 334555556665 678899999999986533110 0 0
Q ss_pred --------CCCceeccCChHHHHHHHhccC---CeecCceeEEEEecCCeeEEEEcCCcEEEcCEEEEecChhhhhcCCc
Q 017808 92 --------PGGHGLMVRGYLPVINTLAKGL---DIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGVLKARTI 160 (365)
Q Consensus 92 --------~g~~~~~~gG~~~L~~~L~~~l---~I~l~~~V~~I~~~~~~v~V~~~~g~~~~ad~VI~t~p~~~l~~~~i 160 (365)
.+...++++|++.|+++|++.+ +|++|++|++|..++++|.|++.+|+++.||+||+|+|++++++ +
T Consensus 216 ~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vi~a~p~~~~~~--l 293 (470)
T 3i6d_A 216 GQQLTAKKQGQFQTLSTGLQTLVEEIEKQLKLTKVYKGTKVTKLSHSGSCYSLELDNGVTLDADSVIVTAPHKAAAG--M 293 (470)
T ss_dssp -----------EEEETTCTHHHHHHHHHTCCSEEEECSCCEEEEEECSSSEEEEESSSCEEEESEEEECSCHHHHHH--H
T ss_pred cccccccCCceEEEeCChHHHHHHHHHHhcCCCEEEeCCceEEEEEcCCeEEEEECCCCEEECCEEEECCCHHHHHH--H
Confidence 1235578999999999999988 69999999999999999999999998899999999999999875 3
Q ss_pred cccCCCcHHHHHHHhhcCCccccEEEEEcCCCCCCC-CCcceeecCCCCc---e-eEee----eccCCCCCceEEEEecc
Q 017808 161 KFEPRLPDWKEAAIDDLGVGIENKIIMHFDKVFWPN-VEFLGVVSDTSYG---C-SYFL----NLHKATGHCVLVYMPAG 231 (365)
Q Consensus 161 ~f~p~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~w~~-~~~~g~~~~~~~~---~-~~~~----~~~~~~g~~~l~~~~~g 231 (365)
.+.|++ .+++++++|+++.|+++.|++++|+. ...+|++.+.... . ..+. +...+.+..+|++++.+
T Consensus 294 ~~~~~~----~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~s~~~~~~~p~~~~~l~~~~~~ 369 (470)
T 3i6d_A 294 LSELPA----ISHLKNMHSTSVANVALGFPEGSVQMEHEGTGFVISRNSDFAITACTWTNKKWPHAAPEGKTLLRAYVGK 369 (470)
T ss_dssp TTTSTT----HHHHHTCEEEEEEEEEEEESSTTCCCSSCSSEEEECSTTCCSEEEEEEHHHHCGGGSCTTCEEEEEEECC
T ss_pred cCCchh----hHHHhcCCCCceEEEEEEECchhcCCCCCCeEEEccCCCCCCceEEEEEcCcCCCcCCCCCEEEEEEECC
Confidence 344433 57889999999999999999999953 4567777554321 1 1121 12235566788888887
Q ss_pred hhhHHHhcCCHHHHHHHHHHHHHHhcCCCCCccEEEeccCCCCCCCCCcCCCCCCCCC---HHHHHHHhCCCCCEEEecc
Q 017808 232 QLARDIEKMSDEAAANFAFTQLKKILPDASSPIQYLVSHWGTDANSLGSYSYDTVGKS---HDLYERLRIPVDNLFFAGE 308 (365)
Q Consensus 232 ~~a~~~~~~~~~e~~~~~~~~L~~~~~~~~~p~~~~~~~W~~~~~~~g~y~~~~~g~~---~~~~~~l~~p~~~l~~aG~ 308 (365)
..+..+..++++++++.++++|+++||...+|....+++|.. +.+.| .+|+. ....+.+.+|.+||||||+
T Consensus 370 ~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~p~~~~~~~w~~---a~p~~---~~g~~~~~~~~~~~l~~~~~~l~~aG~ 443 (470)
T 3i6d_A 370 AGDESIVDLSDNDIINIVLEDLKKVMNINGEPEMTCVTRWHE---SMPQY---HVGHKQRIKELREALASAYPGVYMTGA 443 (470)
T ss_dssp SSCCGGGTSCHHHHHHHHHHHHGGGSCCCSCCSEEEEEEEEE---EEEEC---BTTHHHHHHHHHHHHHHHSTTEEECST
T ss_pred CCCccccCCCHHHHHHHHHHHHHHHhCCCCCceEEEEEEcCC---ccCCC---CCCHHHHHHHHHHHHHhhCCCEEEEee
Confidence 777778889999999999999999998767888899999954 22333 34432 2234456677889999999
Q ss_pred ccCCCCcchhHHHHHHHHHHHHHHHHHH
Q 017808 309 ATSMSYPGSVHGAFSTGLMAAEDCRMRV 336 (365)
Q Consensus 309 ~~~~~~~g~v~gA~~SG~~aA~~i~~~l 336 (365)
++.. .++++|+.||+++|++|++.+
T Consensus 444 ~~~g---~gv~~a~~sG~~aA~~i~~~l 468 (470)
T 3i6d_A 444 SFEG---VGIPDCIDQGKAAVSDALTYL 468 (470)
T ss_dssp TTSC---CSHHHHHHHHHHHHHHHHHHH
T ss_pred cCCC---CCHHHHHHHHHHHHHHHHHHh
Confidence 9864 369999999999999998875
No 13
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=99.96 E-value=1.5e-28 Score=238.05 Aligned_cols=275 Identities=18% Similarity=0.222 Sum_probs=208.7
Q ss_pred CCCCCHHHHHHHHHccCchhhhhhHHHHHHHHHHHh-hhhhcCCCCcccChhcccccc--------c-------------
Q 017808 33 DEDMSIQRAISIVFDRRPELRLEGLAHKVLQWYLCR-MEGWFAADAETISLKSWDKEE--------L------------- 90 (365)
Q Consensus 33 ~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~S~~~~~~~~--------~------------- 90 (365)
..+.|+.+++.+. ++.++.+.++.+ +.++++.+++++|+....... .
T Consensus 145 ~~~~s~~~~l~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 213 (475)
T 3lov_A 145 EQDIPLGEYLRPR-----------LGDALVEKLIEPLLSGIYAGNIDQMSTFATYPQFVANEQKAGSLFEGMRLMRPLDQ 213 (475)
T ss_dssp SSCCBHHHHHHHH-----------HCHHHHHHTHHHHHHGGGCCCTTTSBSTTTCHHHHHHHHHHSSHHHHHHHTCC---
T ss_pred CCCcCHHHHHHHH-----------hCHHHHHHHHHHHhceeecCChHHcCHHHHHHHHHHHHHhcCcHHHHHHHhccccc
Confidence 3578999998763 345566666666 678999999999987532100 0
Q ss_pred ----------cCCCceeccCChHHHHHHHhccC---CeecCceeEEEEecCCeeEEEEcCCcEEEcCEEEEecChhhhhc
Q 017808 91 ----------LPGGHGLMVRGYLPVINTLAKGL---DIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGVLKA 157 (365)
Q Consensus 91 ----------~~g~~~~~~gG~~~L~~~L~~~l---~I~l~~~V~~I~~~~~~v~V~~~~g~~~~ad~VI~t~p~~~l~~ 157 (365)
..+...++++|++.|+++|++.+ +|++|++|++|..++++|.|++.+| ++.||+||+|+|+.++++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~l~~~~i~~~~~V~~i~~~~~~~~v~~~~g-~~~ad~vV~a~p~~~~~~ 292 (475)
T 3lov_A 214 LPQTPQTTIKATGQFLSLETGLESLIERLEEVLERSEIRLETPLLAISREDGRYRLKTDHG-PEYADYVLLTIPHPQVVQ 292 (475)
T ss_dssp -----------CCSEEEETTCHHHHHHHHHHHCSSCEEESSCCCCEEEEETTEEEEECTTC-CEEESEEEECSCHHHHHH
T ss_pred ccccccccccCCCcEEeeCChHHHHHHHHHhhccCCEEEcCCeeeEEEEeCCEEEEEECCC-eEECCEEEECCCHHHHHH
Confidence 02335678999999999999977 6999999999999999999999999 899999999999999875
Q ss_pred CCccccCCCcHHHHHHHhhcCCccccEEEEEcCCCCCCCCCcceeecCCCCce---e-Eeee----ccCCCCCceEEEEe
Q 017808 158 RTIKFEPRLPDWKEAAIDDLGVGIENKIIMHFDKVFWPNVEFLGVVSDTSYGC---S-YFLN----LHKATGHCVLVYMP 229 (365)
Q Consensus 158 ~~i~f~p~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~w~~~~~~g~~~~~~~~~---~-~~~~----~~~~~g~~~l~~~~ 229 (365)
+.+.|++ +++++++|+++.|+++.|+++++.+...+|++.+..... . .+.+ ...+. ..++.+++
T Consensus 293 --ll~~~~~-----~~~~~~~~~~~~~v~l~~~~~~~~~~~g~g~l~~~~~~~~~~~~~~~s~~~~~~~p~-~~~l~~~~ 364 (475)
T 3lov_A 293 --LLPDAHL-----PELEQLTTHSTATVTMIFDQQQSLPIEGTGFVVNRRAPYSITACTAIDQKWNHSAPD-HTVLRAFV 364 (475)
T ss_dssp --HCTTSCC-----HHHHTCCEEEEEEEEEEEECCSSCSSSSSEEEECTTSSCSEEEEEEHHHHCTTTCTT-EEEEEEEE
T ss_pred --HcCccCH-----HHHhcCCCCeEEEEEEEECCcCCCCCCCEEEEecCCCCCceEEEEEEcccCCCCCCC-cEEEEEEe
Confidence 3344443 678999999999999999999854445677775543211 1 1211 11233 45778888
Q ss_pred cchhhHHHhcCCHHHHHHHHHHHHHHhcCCCCCccEEEeccCCCCCCCCCcCCCCCCCCC---HHHHHHHhCCCCCEEEe
Q 017808 230 AGQLARDIEKMSDEAAANFAFTQLKKILPDASSPIQYLVSHWGTDANSLGSYSYDTVGKS---HDLYERLRIPVDNLFFA 306 (365)
Q Consensus 230 ~g~~a~~~~~~~~~e~~~~~~~~L~~~~~~~~~p~~~~~~~W~~~~~~~g~y~~~~~g~~---~~~~~~l~~p~~~l~~a 306 (365)
.++.+..+..++++++++.++++|+++||...+|....+++|... .+.| .+|+. ....+.+.+|.+|||||
T Consensus 365 ~~~~~~~~~~~~~e~~~~~~~~~L~~~~g~~~~p~~~~v~~w~~a---~p~~---~~g~~~~~~~~~~~l~~~~~~l~~a 438 (475)
T 3lov_A 365 GRPGNDHLVHESDEVLQQAVLQDLEKICGRTLEPKQVIISRLMDG---LPAY---TVGHADRIQRVREEVLAQYPGIYLA 438 (475)
T ss_dssp CBTTBCGGGGSCHHHHHHHHHHHHHHHHSSCCCCSEEEEEEEEEE---EECC---CTTHHHHHHHHHHHHHHHSTTEEEC
T ss_pred CCCCCCcccCCCHHHHHHHHHHHHHHHhCCCCCCeEEEEEEcccC---CCCC---CCChHHHHHHHHHHHHhhCCCEEEE
Confidence 877777788899999999999999999987668889999999653 2222 34442 22334566778899999
Q ss_pred ccccCCCCcchhHHHHHHHHHHHHHHHHHH
Q 017808 307 GEATSMSYPGSVHGAFSTGLMAAEDCRMRV 336 (365)
Q Consensus 307 G~~~~~~~~g~v~gA~~SG~~aA~~i~~~l 336 (365)
|+++.. .++++|+.||+++|++|++.+
T Consensus 439 G~~~~g---~g~~~a~~sG~~aA~~i~~~l 465 (475)
T 3lov_A 439 GLAYDG---VGLPDCVASAKTMIESIELEQ 465 (475)
T ss_dssp STTTSC---SSHHHHHHHHHHHHHHHHHTC
T ss_pred ccCCCC---CCHHHHHHHHHHHHHHHHHHh
Confidence 999875 369999999999999998765
No 14
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=99.96 E-value=1.2e-27 Score=231.77 Aligned_cols=280 Identities=18% Similarity=0.166 Sum_probs=204.8
Q ss_pred CCCCCHHHHHHHHHccCchhhhhhHHHHHHHHHHHh-hhhhcCCCCcccChhccccc-----------------------
Q 017808 33 DEDMSIQRAISIVFDRRPELRLEGLAHKVLQWYLCR-MEGWFAADAETISLKSWDKE----------------------- 88 (365)
Q Consensus 33 ~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~S~~~~~~~----------------------- 88 (365)
..++|+.+++++.+ ++.+++.++.+ +.++++.+++++|+..+...
T Consensus 146 ~~~~s~~~~l~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (478)
T 2ivd_A 146 GVDESLAAFGRRHL-----------GHRATQVLLDAVQTGIYAGDVEQLSVAATFPMLVKMEREHRSLILGAIRAQKAQR 214 (478)
T ss_dssp TCCCBHHHHHHHHT-----------CHHHHHHTHHHHHHHHHCCCTTTBBHHHHCHHHHHHHHHHSSHHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHhh-----------CHHHHHHHHHHHhceeecCCHHHhhHHHHhHHHHHHHHhcCcHHHHHHHhhhccc
Confidence 35789999988643 34455555555 56788999999998653210
Q ss_pred -----cccC----CCceeccCChHHHHHHHhccC--CeecCceeEEEEecCCeeEEEE---cCCcEEEcCEEEEecChhh
Q 017808 89 -----ELLP----GGHGLMVRGYLPVINTLAKGL--DIRLGHRVTKITRHYIGVKVTV---EGGKTFVADAVVVAVPLGV 154 (365)
Q Consensus 89 -----~~~~----g~~~~~~gG~~~L~~~L~~~l--~I~l~~~V~~I~~~~~~v~V~~---~~g~~~~ad~VI~t~p~~~ 154 (365)
.... ++.++++||+++|+++|++.+ +|++|++|++|..++++|.|++ .+|+++.||+||+|+|+..
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~lg~~i~~~~~V~~i~~~~~~~~v~~~~~~~g~~~~ad~vV~a~~~~~ 294 (478)
T 2ivd_A 215 QAALPAGTAPKLSGALSTFDGGLQVLIDALAASLGDAAHVGARVEGLAREDGGWRLIIEEHGRRAELSVAQVVLAAPAHA 294 (478)
T ss_dssp CC----CCSCCCCCCEEEETTCTHHHHHHHHHHHGGGEESSEEEEEEECC--CCEEEEEETTEEEEEECSEEEECSCHHH
T ss_pred cccCcccccccccccEEEECCCHHHHHHHHHHHhhhhEEcCCEEEEEEecCCeEEEEEeecCCCceEEcCEEEECCCHHH
Confidence 0011 456788999999999999866 8999999999999888899988 7788899999999999999
Q ss_pred hhcCCccccCCCcHHHHHHHhhcCCccccEEEEEcCCCCCCCCCcceeecCC--C-Cc-eeEeeec----cCCCCCceEE
Q 017808 155 LKARTIKFEPRLPDWKEAAIDDLGVGIENKIIMHFDKVFWPNVEFLGVVSDT--S-YG-CSYFLNL----HKATGHCVLV 226 (365)
Q Consensus 155 l~~~~i~f~p~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~w~~~~~~g~~~~~--~-~~-~~~~~~~----~~~~g~~~l~ 226 (365)
+++. .|++|+.+.+++++++++++.|+++.|++++|+....++++.+. . .. ...+.+. ..+.+..+|+
T Consensus 295 ~~~l----l~~l~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~g~~~l~ 370 (478)
T 2ivd_A 295 TAKL----LRPLDDALAALVAGIAYAPIAVVHLGFDAGTLPAPDGFGFLVPAEEQRRMLGAIHASTTFPFRAEGGRVLYS 370 (478)
T ss_dssp HHHH----HTTTCHHHHHHHHTCCBCCEEEEEEEECTTSSCCCCSSEEECCGGGCCSCCEEEEHHHHCGGGBSTTCEEEE
T ss_pred HHHH----hhccCHHHHHHHhcCCCCcEEEEEEEEccccCCCCCceEEEecCCCCCceEEEEEEcccCCCcCCCCCEEEE
Confidence 8742 27799988899999999999999999999999643345555432 1 11 1222221 1245666888
Q ss_pred EEecchhhHHHhcCCHHHHHHHHHHHHHHhcCCCCCccEEEeccCCCCCCCCCcCCCCCCCCCHHH---HHHHhCCCCCE
Q 017808 227 YMPAGQLARDIEKMSDEAAANFAFTQLKKILPDASSPIQYLVSHWGTDANSLGSYSYDTVGKSHDL---YERLRIPVDNL 303 (365)
Q Consensus 227 ~~~~g~~a~~~~~~~~~e~~~~~~~~L~~~~~~~~~p~~~~~~~W~~~~~~~g~y~~~~~g~~~~~---~~~l~~p~~~l 303 (365)
+++.+..+..+..++++++.+.++++|++++|....|.....++|.. +++.+.+++.... .+.+.. ++||
T Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~w~~------~~p~~~~g~~~~~~~~~~~~~~-~~~l 443 (478)
T 2ivd_A 371 CMVGGARQPGLVEQDEDALAALAREELKALAGVTARPSFTRVFRWPL------GIPQYNLGHLERVAAIDAALQR-LPGL 443 (478)
T ss_dssp EEEECTTCGGGGGSCHHHHHHHHHHHHHHHHCCCSCCSEEEEEEESS------CCBCCBTTHHHHHHHHHHHHHT-STTE
T ss_pred EEeCCcCCccccCCCHHHHHHHHHHHHHHHhCCCCCCcEEEEEECCC------cccCCCcCHHHHHHHHHHHHhh-CCCE
Confidence 88888777778889999999999999999998756788888899954 2333345542211 122333 6899
Q ss_pred EEeccccCCCCcchhHHHHHHHHHHHHHHHHHHH
Q 017808 304 FFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVL 337 (365)
Q Consensus 304 ~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l~ 337 (365)
||||+++.. ++|+||+.||+++|++|++.+.
T Consensus 444 ~~aG~~~~g---~gv~gA~~SG~~aA~~i~~~l~ 474 (478)
T 2ivd_A 444 HLIGNAYKG---VGLNDCIRNAAQLADALVAGNT 474 (478)
T ss_dssp EECSTTTSC---CSHHHHHHHHHHHHHHHCC---
T ss_pred EEEccCCCC---CCHHHHHHHHHHHHHHHHHhhc
Confidence 999999843 3699999999999999987653
No 15
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.95 E-value=2.2e-27 Score=220.09 Aligned_cols=228 Identities=16% Similarity=0.203 Sum_probs=182.8
Q ss_pred ceeccCChHHHHHHHhc--cCCeecCceeEEEEecCCeeEEEEcCCcEEEcCEEEEecChhhhhcCCccccCCCcHHHHH
Q 017808 95 HGLMVRGYLPVINTLAK--GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRLPDWKEA 172 (365)
Q Consensus 95 ~~~~~gG~~~L~~~L~~--~l~I~l~~~V~~I~~~~~~v~V~~~~g~~~~ad~VI~t~p~~~l~~~~i~f~p~Lp~~~~~ 172 (365)
.+...+|++.++++|++ +++|+++++|++|..++++|+|++.+|+++.||+||+|+|++.+.++.-.+.|.||+...+
T Consensus 104 ~~~~~~g~~~l~~~l~~~~g~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vV~A~p~~~~~~ll~~~~~~l~~~~~~ 183 (342)
T 3qj4_A 104 NFVAPQGISSIIKHYLKESGAEVYFRHRVTQINLRDDKWEVSKQTGSPEQFDLIVLTMPVPEILQLQGDITTLISECQRQ 183 (342)
T ss_dssp EEECTTCTTHHHHHHHHHHTCEEESSCCEEEEEECSSSEEEEESSSCCEEESEEEECSCHHHHTTCBSTHHHHSCHHHHH
T ss_pred ceecCCCHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCCHHHHHHHhcccccccCHHHHH
Confidence 45678999999999998 7789999999999999999999999998899999999999999876543456778888899
Q ss_pred HHhhcCCccccEEEEEcCCCCCCCCCcceeecCCCCceeE-eeeccCCC-----CCceEEEEecchhhHHHhcCCHHHHH
Q 017808 173 AIDDLGVGIENKIIMHFDKVFWPNVEFLGVVSDTSYGCSY-FLNLHKAT-----GHCVLVYMPAGQLARDIEKMSDEAAA 246 (365)
Q Consensus 173 ai~~~~~~~~~kv~l~~~~~~w~~~~~~g~~~~~~~~~~~-~~~~~~~~-----g~~~l~~~~~g~~a~~~~~~~~~e~~ 246 (365)
++++++|+++.+|++.|+++||.+.++.|.+.+......+ +.+..++. +..+++++.++.++.++.+++++++.
T Consensus 184 ~l~~~~~~~~~~v~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~k~~r~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 263 (342)
T 3qj4_A 184 QLEAVSYSSRYALGLFYEAGTKIDVPWAGQYITSNPCIRFVSIDNKKRNIESSEIGPSLVIHTTVPFGVTYLEHSIEDVQ 263 (342)
T ss_dssp HHHTCCBCCEEEEEEECSSCC--CCSCSEEECSSCSSEEEEEEHHHHTTCCCC-CCCEEEEEECHHHHHHTTTSCHHHHH
T ss_pred HHhcCCccccEEEEEEECCCCccCCceeeEEccCCcceEEEEccccCCCCCCCCCCceEEEECCHHHHHHhhcCCHHHHH
Confidence 9999999999999999999999777788887664432332 22322221 23478888888888888899999999
Q ss_pred HHHHHHHHHhcCCCCCccEEEeccCCCCCCCCCcCCCC-CCCCCHHHHHHHh-CCCCCEEEeccccCCCCcchhHHHHHH
Q 017808 247 NFAFTQLKKILPDASSPIQYLVSHWGTDANSLGSYSYD-TVGKSHDLYERLR-IPVDNLFFAGEATSMSYPGSVHGAFST 324 (365)
Q Consensus 247 ~~~~~~L~~~~~~~~~p~~~~~~~W~~~~~~~g~y~~~-~~g~~~~~~~~l~-~p~~~l~~aG~~~~~~~~g~v~gA~~S 324 (365)
+.++++|++++|...+|..+.++||. |+...|... .+++ +. .+.++|++||+++.+ +++++|+.|
T Consensus 264 ~~~~~~l~~~~g~~~~p~~~~v~rW~---~a~p~~~~~~~~~~-------~~~~~~~~l~laGd~~~g---~~v~~ai~s 330 (342)
T 3qj4_A 264 ELVFQQLENILPGLPQPIATKCQKWR---HSQVTNAAANCPGQ-------MTLHHKPFLACGGDGFTQ---SNFDGCITS 330 (342)
T ss_dssp HHHHHHHHHHSCSCCCCSEEEEEEET---TCSBSSCCSSSCSC-------EEEETTTEEEECSGGGSC---SSHHHHHHH
T ss_pred HHHHHHHHHhccCCCCCceeeecccc---ccccccccCCCcce-------eEecCCccEEEEccccCC---CCccHHHHH
Confidence 99999999999977789999999994 555555431 1222 12 345799999999976 599999999
Q ss_pred HHHHHHHHHHH
Q 017808 325 GLMAAEDCRMR 335 (365)
Q Consensus 325 G~~aA~~i~~~ 335 (365)
|++||++|+..
T Consensus 331 g~~aa~~i~~~ 341 (342)
T 3qj4_A 331 ALCVLEALKNY 341 (342)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHHHhh
Confidence 99999998754
No 16
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=99.95 E-value=1.3e-27 Score=233.13 Aligned_cols=281 Identities=17% Similarity=0.184 Sum_probs=203.6
Q ss_pred CCCCHHHHHHHHHccCchhhhhhHHHHHHHHHHHh-hhhhcCCCCcccChhcccc---c--------------cc-----
Q 017808 34 EDMSIQRAISIVFDRRPELRLEGLAHKVLQWYLCR-MEGWFAADAETISLKSWDK---E--------------EL----- 90 (365)
Q Consensus 34 ~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~S~~~~~~---~--------------~~----- 90 (365)
.+.|+.+++++. +++++++.++.+ +.++++.+++++|+.++.. . ..
T Consensus 148 ~~~s~~~~l~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 216 (504)
T 1sez_A 148 SHESVSGFFQRH-----------FGKEVVDYLIDPFVAGTCGGDPDSLSMHHSFPELWNLEKRFGSVILGAIRSKLSPKN 216 (504)
T ss_dssp CCCBHHHHHHHH-----------HCHHHHHTTHHHHHHHHHSCCGGGSBHHHHCHHHHHHHHHTSCHHHHHHHHTTC---
T ss_pred CCccHHHHHHHH-----------cCHHHHHHHHHHHHccccCCChHHhhHHHHhHHHHHHHHHhCCHHHHHHHhhhcccc
Confidence 568999998864 345566666665 5678999999999864210 0 00
Q ss_pred --------------cCCCceeccCChHHHHHHHhccC---CeecCceeEEEEecCCe------eEEEEc--CC---cEEE
Q 017808 91 --------------LPGGHGLMVRGYLPVINTLAKGL---DIRLGHRVTKITRHYIG------VKVTVE--GG---KTFV 142 (365)
Q Consensus 91 --------------~~g~~~~~~gG~~~L~~~L~~~l---~I~l~~~V~~I~~~~~~------v~V~~~--~g---~~~~ 142 (365)
...+.++++||+++|+++|++.+ +|++|++|++|..++++ |.|++. +| +++.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~GG~~~l~~~l~~~l~~~~i~~~~~V~~I~~~~~~~~~~~~~~v~~~~~~g~~~~~~~ 296 (504)
T 1sez_A 217 EKKQGPPKTSANKKRQRGSFSFLGGMQTLTDAICKDLREDELRLNSRVLELSCSCTEDSAIDSWSIISASPHKRQSEEES 296 (504)
T ss_dssp -------CCCSCCSTTCSCBEETTCTHHHHHHHHTTSCTTTEETTCCEEEEEEECSSSSSSCEEEEEEBCSSSSCBCCCE
T ss_pred cccccccchhhccccCCceEeeCcHHHHHHHHHHhhcccceEEcCCeEEEEEecCCCCcccceEEEEEcCCCCccceeEE
Confidence 11246778999999999999876 59999999999988877 777654 45 5789
Q ss_pred cCEEEEecChhhhhcCCcc-ccCCCcHHHHHHHhhcCCccccEEEEEcCCCCCC-CCCcceeecCCCC------cee-Ee
Q 017808 143 ADAVVVAVPLGVLKARTIK-FEPRLPDWKEAAIDDLGVGIENKIIMHFDKVFWP-NVEFLGVVSDTSY------GCS-YF 213 (365)
Q Consensus 143 ad~VI~t~p~~~l~~~~i~-f~p~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~w~-~~~~~g~~~~~~~------~~~-~~ 213 (365)
||+||+|+|+.++++.... ..+++++. .++++.++++.++++.|++++|+ ....++++.+... ... .+
T Consensus 297 ad~VI~a~p~~~l~~ll~~~~~~~~~~~---~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~ 373 (504)
T 1sez_A 297 FDAVIMTAPLCDVKSMKIAKRGNPFLLN---FIPEVDYVPLSVVITTFKRENVKYPLEGFGVLVPSKEQQHGLKTLGTLF 373 (504)
T ss_dssp ESEEEECSCHHHHHTSEEESSSSBCCCT---TSCCCCEEEEEEEEEEEEGGGBSSCCCSSEEECCGGGGGGTCCSSEEEE
T ss_pred CCEEEECCCHHHHHHHhhcccCCcccHH---HHhcCCCCceEEEEEEEchhhcCCCCCceEEEcCCCCCCCCCccceEEe
Confidence 9999999999999854311 11234432 26778889999999999999995 3345666554211 111 12
Q ss_pred e----eccCCCCCceEEEEecchhhHHHhcCCHHHHHHHHHHHHHHhcCCCCCccEEEeccCCCCCCCCCcCCCCCCCCC
Q 017808 214 L----NLHKATGHCVLVYMPAGQLARDIEKMSDEAAANFAFTQLKKILPDASSPIQYLVSHWGTDANSLGSYSYDTVGKS 289 (365)
Q Consensus 214 ~----~~~~~~g~~~l~~~~~g~~a~~~~~~~~~e~~~~~~~~L~~~~~~~~~p~~~~~~~W~~~~~~~g~y~~~~~g~~ 289 (365)
. +...+.+..+|++|+++..+..+..++++++++.++++|++++|...+|..+.+++|.+. |+.+.+|+.
T Consensus 374 ~s~~~~~~~p~g~~~l~~~~~g~~~~~~~~~~~ee~~~~v~~~L~~~~g~~~~p~~~~~~~w~~~------~p~~~~g~~ 447 (504)
T 1sez_A 374 SSMMFPDRAPNNVYLYTTFVGGSRNRELAKASRTELKEIVTSDLKQLLGAEGEPTYVNHLYWSKA------FPLYGHNYD 447 (504)
T ss_dssp HHHHCGGGSCTTEEEEEEEEESTTCGGGTTCCHHHHHHHHHHHHHHHHCBCSCCSSEEEEEEEEE------EECCCTTHH
T ss_pred eccccCCcCCCCCEEEEEEeCCCCcccccCCCHHHHHHHHHHHHHHHhCCCCCCeEEEEeECCCC------CCccCcCHH
Confidence 1 122355666888999888777888899999999999999999987557888889999652 222334432
Q ss_pred HH--HHHHHhCCCCCEEEeccccCCCCcchhHHHHHHHHHHHHHHHHHHH
Q 017808 290 HD--LYERLRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVL 337 (365)
Q Consensus 290 ~~--~~~~l~~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l~ 337 (365)
.. ......+|++||||||+++++ ++++||+.||++||++|++.+.
T Consensus 448 ~~~~~~~~~~~~~~~l~~aG~~~~g---~~v~gai~sG~~aA~~il~~l~ 494 (504)
T 1sez_A 448 SVLDAIDKMEKNLPGLFYAGNHRGG---LSVGKALSSGCNAADLVISYLE 494 (504)
T ss_dssp HHHHHHHHHHHHSTTEEECCSSSSC---SSHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhCCCEEEEeecCCC---CCHHHHHHHHHHHHHHHHHHHh
Confidence 11 123345678999999999873 5899999999999999998764
No 17
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=99.95 E-value=7.5e-28 Score=238.90 Aligned_cols=259 Identities=18% Similarity=0.153 Sum_probs=186.6
Q ss_pred CcccChhccccc--cccCCCceeccCChHHHHHHHhccC----CeecCceeE--EEEecCCe-------eEE-EEcCCc-
Q 017808 77 AETISLKSWDKE--ELLPGGHGLMVRGYLPVINTLAKGL----DIRLGHRVT--KITRHYIG-------VKV-TVEGGK- 139 (365)
Q Consensus 77 ~~~~S~~~~~~~--~~~~g~~~~~~gG~~~L~~~L~~~l----~I~l~~~V~--~I~~~~~~-------v~V-~~~~g~- 139 (365)
....|+..++.. ....+..+.+.||+++|+++|++.+ .|++|++|+ +|.+++++ |+| .+.+|+
T Consensus 319 ~~~~S~le~L~~~~~~~~~~~~~i~GG~~~L~~aLa~~l~~g~~I~l~~~V~~~~I~~~~~g~~~~~~~V~V~~~~~G~~ 398 (721)
T 3ayj_A 319 LYNISLVEMMRLILWDYSNEYTLPVTENVEFIRNLFLKAQNVGAGKLVVQVRQERVANACHSGTASARAQLLSYDSHNAV 398 (721)
T ss_dssp GTTBBHHHHHHHHHTTTTCEECCSSSSTHHHHHHHHHHHHHHTTTSEEEEEECEEEEEEEECSSSSCCEEEEEEETTCCE
T ss_pred ccchhHHHHHHHHhcCCccceeEECCcHHHHHHHHHHhcccCCceEeCCEEEeeeEEECCCCCccccceEEEEEecCCce
Confidence 456666543311 1123345678999999999998865 599999999 99987655 888 456776
Q ss_pred -EEEcCEEEEecChhhhhc----CCcc-------c--------------cCC-C-c-------HHHHHHHhhcCCccccE
Q 017808 140 -TFVADAVVVAVPLGVLKA----RTIK-------F--------------EPR-L-P-------DWKEAAIDDLGVGIENK 184 (365)
Q Consensus 140 -~~~ad~VI~t~p~~~l~~----~~i~-------f--------------~p~-L-p-------~~~~~ai~~~~~~~~~k 184 (365)
++.||+||+|+|+++|.. ..|. + .|+ | | ..+++++++++|++..|
T Consensus 399 ~~~~aD~VIvTvP~~~L~~~~~r~~i~~~~~~~~~~~~~~~~~~~~~~~~pplLlp~~~~~~~~~~~~Ai~~l~~~~s~K 478 (721)
T 3ayj_A 399 HSEAYDFVILAVPHDQLTPIVSRSGFEHAASQNLGDAGLGLETHTYNQVYPPLLLSDSSPAANARIVTAIGQLHMARSSK 478 (721)
T ss_dssp EEEEESEEEECSCHHHHHHHHSSSCSSCEEEEEESCGGGTCCCEEEEEEBCSSCCCSSCHHHHHHHHHHHHTCCEECEEE
T ss_pred EEEEcCEEEECCCHHHHhhccccccccccccccccccccccccccccccCCcccCCcccccccHHHHHHHHhcCcccceE
Confidence 799999999999999853 2343 2 344 6 8 89999999999999999
Q ss_pred EEEEc-----CCCCCCCC-C-cceee-cCCCCc-eeEee-----eccCCCCCceEEEEecchhhHHH------hcCCHHH
Q 017808 185 IIMHF-----DKVFWPNV-E-FLGVV-SDTSYG-CSYFL-----NLHKATGHCVLVYMPAGQLARDI------EKMSDEA 244 (365)
Q Consensus 185 v~l~~-----~~~~w~~~-~-~~g~~-~~~~~~-~~~~~-----~~~~~~g~~~l~~~~~g~~a~~~------~~~~~~e 244 (365)
|++.| +++||++. + ..+.. .+.... +.+++ +..++....+|..|++++.+..+ ..+++++
T Consensus 479 v~l~~~~~~~~~~fW~~~~g~~i~~s~TD~~~r~~~~~p~p~~~d~~~~~~gvlL~sYtwg~dA~~~~~~~g~~~~~~~e 558 (721)
T 3ayj_A 479 VFATVKTAALDQPWVPQWRGEPIKAVVSDSGLAASYVVPSPIVEDGQAPEYSSLLASYTWEDDSTRLRHDFGLYPQNPAT 558 (721)
T ss_dssp EEEEEEGGGGGSTTSCEETTEECCEEEETTTTEEEEEEECSCC----CCSEEEEEEEEEETHHHHHHHTTCCSSSEESSS
T ss_pred EEEEEccccCCCCcccccCCCCceeeecCCCcceEEEeccCcccccCCCCCcEEEEEEeCccchhhhhccccccCCChHH
Confidence 99999 99999653 1 12222 222221 12221 11122222367789999888888 5555555
Q ss_pred H-------HHHHHHHHH--HhcCCCC--------------CccEEEeccCCCCCCCCCcCCCCCCCCCH--HHH-HH---
Q 017808 245 A-------ANFAFTQLK--KILPDAS--------------SPIQYLVSHWGTDANSLGSYSYDTVGKSH--DLY-ER--- 295 (365)
Q Consensus 245 ~-------~~~~~~~L~--~~~~~~~--------------~p~~~~~~~W~~~~~~~g~y~~~~~g~~~--~~~-~~--- 295 (365)
. ++.++++|+ +++|+.. .+.++..++|.++| +.|+|....||+.. ... +.
T Consensus 559 r~~~~~~~~~~~l~~la~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~dW~~dp-s~Gaf~~~~pgq~~~~~l~~~~~~~ 637 (721)
T 3ayj_A 559 ETGTADGMYRTMVNRAYRYVKYAGASNAQPWWFYQLLAEARTADRFVFDWTTNK-TAGGFKLDMTGDHHQSNLCFRYHTH 637 (721)
T ss_dssp SSCCCHHHHHHHHHHTCCEECCTTCSSCEECHHHHHHHTSCSTTCEEEEGGGST-TSSSEECCBTTTHHHHHHHHHGGGG
T ss_pred hhhhhhHHHHHHHHHHhhhccCccccccccchhhhhhhhcccCceEEEeCCCCC-CCCccccCCCccchhhhhhhhhhhh
Confidence 5 999999999 8887633 13456788999999 99999988898821 111 11
Q ss_pred --HhCCCCCEEEeccccCCCCcchhHHHHHHHHHHHHHHHHHHH
Q 017808 296 --LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVL 337 (365)
Q Consensus 296 --l~~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l~ 337 (365)
+.+|.+++|||||+++. +.||++||++||.+||..|+.++.
T Consensus 638 ~~~~~~~gri~fAGe~~S~-~~GWieGAl~Sa~~Aa~~i~~~~~ 680 (721)
T 3ayj_A 638 ALAASLDNRFFIASDSYSH-LGGWLEGAFMSALNAVAGLIVRAN 680 (721)
T ss_dssp GGCTTTCCCEEECSGGGSS-CTTSHHHHHHHHHHHHHHHHHHHT
T ss_pred ccccCCCCCEEEeehhhcc-CCceehHHHHHHHHHHHHHHHHhc
Confidence 23567899999999985 689999999999999999998764
No 18
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.94 E-value=4.3e-26 Score=220.75 Aligned_cols=276 Identities=17% Similarity=0.134 Sum_probs=202.0
Q ss_pred CCCCHHHHHHHHHccCchhhhhhHHHHHHHHHHHh-hhhhcCCCCcccChhccccc--c---------------------
Q 017808 34 EDMSIQRAISIVFDRRPELRLEGLAHKVLQWYLCR-MEGWFAADAETISLKSWDKE--E--------------------- 89 (365)
Q Consensus 34 ~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~S~~~~~~~--~--------------------- 89 (365)
.+.|+.+++.+. +++++.+.++.+ +.++|+.+++++|+..+... .
T Consensus 142 ~~~s~~~~~~~~-----------~g~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~l~~~e~~~gsl~~~~~~~~~~~~~ 210 (477)
T 3nks_A 142 PDETVHSFAQRR-----------LGPEVASLAMDSLCRGVFAGNSRELSIRSCFPSLFQAEQTHRSILLGLLLGAGRTPQ 210 (477)
T ss_dssp SCCBHHHHHHHH-----------HCHHHHHHTHHHHHHHHHSSCTTTBBHHHHCHHHHHHHHHHSCHHHHHHHC-----C
T ss_pred CCcCHHHHHHHh-----------hCHHHHHHHHHHHhcccccCCHHHhhHHHHHHHHHHHHHHcCCHHHHHHHhcccccC
Confidence 467888887753 445666767766 67899999999999775311 0
Q ss_pred ----------ccCCCceeccCChHHHHHHHhcc-----CCeecCceeEEEEecCCe-eEEEEcCCcEEEcCEEEEecChh
Q 017808 90 ----------LLPGGHGLMVRGYLPVINTLAKG-----LDIRLGHRVTKITRHYIG-VKVTVEGGKTFVADAVVVAVPLG 153 (365)
Q Consensus 90 ----------~~~g~~~~~~gG~~~L~~~L~~~-----l~I~l~~~V~~I~~~~~~-v~V~~~~g~~~~ad~VI~t~p~~ 153 (365)
....+.++++||++.|+++|++. ++|++|++|++|..++++ |.|++. |.++.||+||+|+|+.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~~~~v~~~-~~~~~ad~vv~a~p~~ 289 (477)
T 3nks_A 211 PDSALIRQALAERWSQWSLRGGLEMLPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSLR-DSSLEADHVISAIPAS 289 (477)
T ss_dssp CCCHHHHHHHHTTCSEEEETTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEECGGGCEEEECS-SCEEEESEEEECSCHH
T ss_pred CchhhhhhhcccCccEEEECCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCceEEEEEC-CeEEEcCEEEECCCHH
Confidence 00123578899999999999874 489999999999998877 888774 5589999999999999
Q ss_pred hhhcCCccccCCCcHHHHHHHhhcCCccccEEEEEcCCCCCCCCCcceeecCCCC---cee-Eeeec-c----CCCCCce
Q 017808 154 VLKARTIKFEPRLPDWKEAAIDDLGVGIENKIIMHFDKVFWPNVEFLGVVSDTSY---GCS-YFLNL-H----KATGHCV 224 (365)
Q Consensus 154 ~l~~~~i~f~p~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~w~~~~~~g~~~~~~~---~~~-~~~~~-~----~~~g~~~ 224 (365)
.++++. |++++...+++++++|+++.++++.|++++|+. ..+|++.+... ... .|++. . .+.+..+
T Consensus 290 ~~~~ll----~~~~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~-~~~g~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 364 (477)
T 3nks_A 290 VLSELL----PAEAAPLARALSAITAVSVAVVNLQYQGAHLPV-QGFGHLVPSSEDPGVLGIVYDSVAFPEQDGSPPGLR 364 (477)
T ss_dssp HHHHHS----CGGGHHHHHHHHTCCEEEEEEEEEEETTCCCSS-CSSEEECCTTTCSSEEEEECHHHHCGGGSTTTTCEE
T ss_pred HHHHhc----cccCHHHHHHHhcCCCCcEEEEEEEECCCCCCC-CCceEEccCCCCCCceEEEEeccccCCCCCCCCceE
Confidence 987532 445566778899999999999999999999964 34577765321 112 22221 1 1225678
Q ss_pred EEEEecchhhHHHh----cCCHHHHHHHHHHHHHHhcCCCCCccEEEeccCCCCCCCCCcCCCCCCCCCHH---HHHHHh
Q 017808 225 LVYMPAGQLARDIE----KMSDEAAANFAFTQLKKILPDASSPIQYLVSHWGTDANSLGSYSYDTVGKSHD---LYERLR 297 (365)
Q Consensus 225 l~~~~~g~~a~~~~----~~~~~e~~~~~~~~L~~~~~~~~~p~~~~~~~W~~~~~~~g~y~~~~~g~~~~---~~~~l~ 297 (365)
|++++++.++..+. .++++++.+.++++|++++|...+|....+++|.. + ++.+.+|+... ..+.+.
T Consensus 365 l~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~v~rw~~---a---~p~~~~g~~~~~~~~~~~l~ 438 (477)
T 3nks_A 365 VTVMLGGSWLQTLEASGCVLSQELFQQRAQEAAATQLGLKEMPSHCLVHLHKN---C---IPQYTLGHWQKLESARQFLT 438 (477)
T ss_dssp EEEEECHHHHHHHHHSSCCCCHHHHHHHHHHHHHHHHCCCSCCSEEEEEEEEE---E---EECCBTTHHHHHHHHHHHHH
T ss_pred EEEEECCccccccccccCCCCHHHHHHHHHHHHHHHhCCCCCCcEEEEEEcCC---c---cCCCCCCHHHHHHHHHHHHH
Confidence 88999887766553 46899999999999999998766788888999943 3 33334554322 122333
Q ss_pred CCCCCEEEeccccCCCCcchhHHHHHHHHHHHHHHHHH
Q 017808 298 IPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMR 335 (365)
Q Consensus 298 ~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~~ 335 (365)
...++|++||+++.+ .+|++|+.||+++|++|+..
T Consensus 439 ~~~~~l~l~G~~~~G---~gv~~a~~sg~~aA~~il~~ 473 (477)
T 3nks_A 439 AHRLPLTLAGASYEG---VAVNDCIESGRQAAVSVLGT 473 (477)
T ss_dssp HTTCSEEECSTTTSC---CSHHHHHHHHHHHHHHHHHC
T ss_pred hcCCCEEEEccCCCC---CcHHHHHHHHHHHHHHHHhc
Confidence 334689999999854 47999999999999998753
No 19
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.90 E-value=9.2e-23 Score=194.42 Aligned_cols=274 Identities=14% Similarity=0.075 Sum_probs=187.6
Q ss_pred CCCCCCHHHHHHHHHccCchhhhhhHHHHHHHHHHHh-hhhhcCCCCcccChhcccc---ccccCCCceeccCChHHHHH
Q 017808 32 HDEDMSIQRAISIVFDRRPELRLEGLAHKVLQWYLCR-MEGWFAADAETISLKSWDK---EELLPGGHGLMVRGYLPVIN 107 (365)
Q Consensus 32 ~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~S~~~~~~---~~~~~g~~~~~~gG~~~L~~ 107 (365)
...+.|+.+++.+++. .+.++.++.+ ..+.++.+++++|+..+.. .....++..++.||++.|++
T Consensus 132 ~~~~~s~~~~l~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~gG~~~l~~ 200 (425)
T 3ka7_A 132 RPSGSSLQAWIKSQVS-----------DEWLIKFADSFCGWALSLKSDEVPVEEVFEIIENMYRFGGTGIPEGGCKGIID 200 (425)
T ss_dssp CCCSSBHHHHHHHHCC-----------CHHHHHHHHHHHHHHHSSCGGGSBHHHHHHHHHHHHHHCSCEEETTSHHHHHH
T ss_pred CCCCCCHHHHHHHhcC-----------CHHHHHHHHHHHHHHhCCCcccchHHHHHHHHHHHHhcCCccccCCCHHHHHH
Confidence 3457899999887542 2233334444 4466889999999965331 11234567789999999999
Q ss_pred HHhc-----cCCeecCceeEEEEecCCeeE-EEEcCCcEEEcCEEEEecChhhhhcCCccccCCC--cHHHHHHHhhcCC
Q 017808 108 TLAK-----GLDIRLGHRVTKITRHYIGVK-VTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRL--PDWKEAAIDDLGV 179 (365)
Q Consensus 108 ~L~~-----~l~I~l~~~V~~I~~~~~~v~-V~~~~g~~~~ad~VI~t~p~~~l~~~~i~f~p~L--p~~~~~ai~~~~~ 179 (365)
+|++ +++|++|++|++|..++++|. |++. |+++.||+||+|+|+..+.++ +...+.+ |+...+.++++.+
T Consensus 201 ~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~gv~~~-g~~~~ad~VV~a~~~~~~~~l-l~~~~~~~~~~~~~~~~~~~~~ 278 (425)
T 3ka7_A 201 ALETVISANGGKIHTGQEVSKILIENGKAAGIIAD-DRIHDADLVISNLGHAATAVL-CSEALSKEADAAYFKMVGTLQP 278 (425)
T ss_dssp HHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEET-TEEEECSEEEECSCHHHHHHH-TTTTCCTTTTHHHHHHHHHCCC
T ss_pred HHHHHHHHcCCEEEECCceeEEEEECCEEEEEEEC-CEEEECCEEEECCCHHHHHHh-cCCcccccCCHHHHHHhhCcCC
Confidence 9987 458999999999999988887 7664 778999999999999998752 2222334 7777888999999
Q ss_pred ccccEEEEEcCCCCCCCCCcceeecCCCC-ce--eEe----eeccCCCCCceEEEEecchhhHHHhcCCHHHHHHHHHHH
Q 017808 180 GIENKIIMHFDKVFWPNVEFLGVVSDTSY-GC--SYF----LNLHKATGHCVLVYMPAGQLARDIEKMSDEAAANFAFTQ 252 (365)
Q Consensus 180 ~~~~kv~l~~~~~~w~~~~~~g~~~~~~~-~~--~~~----~~~~~~~g~~~l~~~~~g~~a~~~~~~~~~e~~~~~~~~ 252 (365)
++..++++.|+++.+. .++.+.+.+. .. ..+ +....|.|+.++.++....+ +.... +++.++.++++
T Consensus 279 ~~~~~v~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~s~~~p~~ap~G~~~l~~~~~~~~--~~~~~-~~~~~~~~~~~ 352 (425)
T 3ka7_A 279 SAGIKICLAADEPLVG---HTGVLLTPYTRRINGVNEVTQADPELAPPGKHLTMCHQYVAP--ENVKN-LESEIEMGLED 352 (425)
T ss_dssp BEEEEEEEEESSCSSC---SSSEEECCSSSSEEEEECGGGTCGGGSCTTCEEEEEEEEECG--GGGGG-HHHHHHHHHHH
T ss_pred CceEEEEeecCCCccC---cCEEEECCChhhcceEEeccCCCCCcCCCCCeEEEEEecccc--ccccc-hHHHHHHHHHH
Confidence 9888999999998763 2333322221 11 111 11234567777766554322 11112 24567999999
Q ss_pred HHHhcCCCCCccEEEeccCCCCCCCCCcCCCCCCCCCHHHHHHHhCCCCCEEEeccccCCCCcchhHHHHHHHHHHHHHH
Q 017808 253 LKKILPDASSPIQYLVSHWGTDANSLGSYSYDTVGKSHDLYERLRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDC 332 (365)
Q Consensus 253 L~~~~~~~~~p~~~~~~~W~~~~~~~g~y~~~~~g~~~~~~~~l~~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i 332 (365)
|++++|. ..+....+++|.. +.+.| .++.. .+.....|++|||+||+++.+.++-+|++|+.||++||++|
T Consensus 353 l~~~~p~-~~~~~~~v~~~~~---~~P~~---~~~~~--~~~~~~~p~~gL~laG~~~~~~gg~gv~~~~~s~~~~~~~i 423 (425)
T 3ka7_A 353 LKEIFPG-KRYEVLLIQSYHD---EWPVN---RAASG--TDPGNETPFSGLYVVGDGAKGKGGIEVEGVALGVMSVMEKV 423 (425)
T ss_dssp HHHHSTT-CCEEEEEEEEEBT---TBCSB---SSCTT--CCCCSBCSSBTEEECSTTSCCTTCCHHHHHHHHHHHHHHC-
T ss_pred HHHhCCC-CceEEEEEEEECC---Ccccc---ccccC--CCCCCCCCcCCeEEeCCccCCCCCCccHHHHHHHHHHHHHh
Confidence 9999986 3455556778854 22222 33321 22334677889999999999977789999999999999988
Q ss_pred H
Q 017808 333 R 333 (365)
Q Consensus 333 ~ 333 (365)
+
T Consensus 424 ~ 424 (425)
T 3ka7_A 424 L 424 (425)
T ss_dssp -
T ss_pred h
Confidence 6
No 20
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=99.86 E-value=4.9e-21 Score=185.35 Aligned_cols=278 Identities=11% Similarity=0.059 Sum_probs=192.0
Q ss_pred CCCCCCHHHHHHHHHccCchhhhhhHHHHHHHHHHHh-hhhhcCCCCcccChhccccccc---------------c----
Q 017808 32 HDEDMSIQRAISIVFDRRPELRLEGLAHKVLQWYLCR-MEGWFAADAETISLKSWDKEEL---------------L---- 91 (365)
Q Consensus 32 ~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~S~~~~~~~~~---------------~---- 91 (365)
...+.|+.+++.+ .+++++++.++.+ +.++|+.+++++|+.+...... .
T Consensus 133 ~~~~~s~~e~~~~-----------~~g~~~~~~~~~p~~~~v~~~~~~~ls~~~~~~r~~~~~l~~~~~~~~~~~~~~~~ 201 (484)
T 4dsg_A 133 TEPPNNFEESFTR-----------QFGEGIADIFMRPYNFKVWAVPPCLMSTEWVEERVAPVDLERIRRNIQENRDDLGW 201 (484)
T ss_dssp SSCCSSHHHHHHH-----------HHHHHHCCCCCHHHHHHHHSSCGGGBCSSSCTTTSCCCCHHHHHHHHHHTCCCCCC
T ss_pred CCCCCCHHHHHHH-----------HhHHHHHHHHHHHHHhhhcCCCHHHhcHHHHhccccCCCHHHHHHHHhhcccccCC
Confidence 4568899999886 3567777777776 6789999999999976432100 0
Q ss_pred --CCCcee-ccCChHHHHHHHhccC---CeecC--ceeEEEEecCCeeEEEEcCCcEEEcCEEEEecChhhhhcCCcccc
Q 017808 92 --PGGHGL-MVRGYLPVINTLAKGL---DIRLG--HRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGVLKARTIKFE 163 (365)
Q Consensus 92 --~g~~~~-~~gG~~~L~~~L~~~l---~I~l~--~~V~~I~~~~~~v~V~~~~g~~~~ad~VI~t~p~~~l~~~~i~f~ 163 (365)
.+...+ +.||+++|+++|++.+ +|+++ ++|++|..++++|+ +.+|+++.||+||+|+|+..+.+......
T Consensus 202 ~~~~~f~yp~~gG~~~l~~~la~~l~~~~i~~~~~~~V~~I~~~~~~v~--~~~G~~~~ad~VI~a~p~~~~~~ll~~~~ 279 (484)
T 4dsg_A 202 GPNATFRFPQRGGTGIIYQAIKEKLPSEKLTFNSGFQAIAIDADAKTIT--FSNGEVVSYDYLISTVPFDNLLRMTKGTG 279 (484)
T ss_dssp STTSEEEEESSSCTHHHHHHHHHHSCGGGEEECGGGCEEEEETTTTEEE--ETTSCEEECSEEEECSCHHHHHHHEECSS
T ss_pred CccceEEeecCCCHHHHHHHHHhhhhhCeEEECCCceeEEEEecCCEEE--ECCCCEEECCEEEECCCHHHHHHHhhccC
Confidence 001122 4699999999999988 69999 56999998888754 57888999999999999999875332223
Q ss_pred CCCcHHHHHHHhhcCCccccEEEEEcCCCCCCC-CCcceeecCCCCc----eeEeeecc---CCCCCceEEEEecchhhH
Q 017808 164 PRLPDWKEAAIDDLGVGIENKIIMHFDKVFWPN-VEFLGVVSDTSYG----CSYFLNLH---KATGHCVLVYMPAGQLAR 235 (365)
Q Consensus 164 p~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~w~~-~~~~g~~~~~~~~----~~~~~~~~---~~~g~~~l~~~~~g~~a~ 235 (365)
|++|+...+++++++|.++.++.+.|+.+.-.+ .+.++++.++... ...+.+.. .+.++.+++..++..
T Consensus 280 ~~~~~~~~~~l~~l~y~s~~~v~l~~~~~~~~~~~~~~~i~vp~~~~~~~ri~~~s~~~p~~ap~g~~~l~~e~~~~--- 356 (484)
T 4dsg_A 280 FKGYDEWPAIADKMVYSSTNVIGIGVKGTPPPHLKTACWLYFPEDTSPFYRATVFSNYSKYNVPEGHWSLMLEVSES--- 356 (484)
T ss_dssp CTTGGGHHHHHHHCCEEEEEEEEEEEESCCCGGGTTCCEEECCSTTCSCSEEECGGGTCGGGSCTTEEEEEEEEEEB---
T ss_pred CCCCHHHHHHHhCCCcCceEEEEEEEcCCCcccCCCCeEEEEEcCCCeEEEEEeecCCCcccCCCCeEEEEEEEecC---
Confidence 568888889999999999999999998863211 2345665443221 11122221 245555666555432
Q ss_pred HHhcCCHHHHHHHHHHHHHHhcCCCC-Ccc-EEEeccCCCCCCCCCcCCCCCCCCCHH---HHHHHhCCCCCEEEecccc
Q 017808 236 DIEKMSDEAAANFAFTQLKKILPDAS-SPI-QYLVSHWGTDANSLGSYSYDTVGKSHD---LYERLRIPVDNLFFAGEAT 310 (365)
Q Consensus 236 ~~~~~~~~e~~~~~~~~L~~~~~~~~-~p~-~~~~~~W~~~~~~~g~y~~~~~g~~~~---~~~~l~~p~~~l~~aG~~~ 310 (365)
.....+++++++.++++|.++.+..+ +++ ...+++|. .+|+.+.+|+... ..+.+.. . ||+++|...
T Consensus 357 ~~~~~~d~~l~~~a~~~L~~~~~~~~~~~~~~~~v~r~~------~~yP~y~~~~~~~~~~~~~~l~~-~-~l~~~Gr~g 428 (484)
T 4dsg_A 357 KYKPVNHSTLIEDCIVGCLASNLLLPEDLLVSKWHYRIE------KGYPTPFIGRNNLLEKAQPELMS-R-CIYSRGRFG 428 (484)
T ss_dssp TTBCCCTTSHHHHHHHHHHHTTSCCTTCCEEEEEEEEEE------EEEECCBTTHHHHHHHHHHHHHH-T-TEEECSTTT
T ss_pred cCCcCCHHHHHHHHHHHHHHcCCCCccceEEEEEEEEeC------ccccCCCccHHHHHHHHHHHHHh-C-CcEeecCCc
Confidence 34567899999999999999864322 333 34567883 3455455664322 2333433 3 999999965
Q ss_pred CCCCc-chhHHHHHHHHHHHHHHH
Q 017808 311 SMSYP-GSVHGAFSTGLMAAEDCR 333 (365)
Q Consensus 311 ~~~~~-g~v~gA~~SG~~aA~~i~ 333 (365)
...|. +.++.|+.||.+||++|+
T Consensus 429 ~~~y~v~~~d~~i~sg~~aa~~i~ 452 (484)
T 4dsg_A 429 AWRYEVGNQDHSFMQGVEAIDHVL 452 (484)
T ss_dssp TCCGGGCSHHHHHHHHHHHHHHHT
T ss_pred ccccCCCChHHHHHHHHHHHHHHH
Confidence 55442 479999999999999988
No 21
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.83 E-value=2.4e-20 Score=181.53 Aligned_cols=262 Identities=13% Similarity=0.077 Sum_probs=133.7
Q ss_pred hhcCCCCcccChhccc-cccccCCCceeccCChHHHHHHHhc-----cCCeecCceeEEEEecCCeeE-EEEcCCcEEEc
Q 017808 71 GWFAADAETISLKSWD-KEELLPGGHGLMVRGYLPVINTLAK-----GLDIRLGHRVTKITRHYIGVK-VTVEGGKTFVA 143 (365)
Q Consensus 71 ~~~g~~~~~~S~~~~~-~~~~~~g~~~~~~gG~~~L~~~L~~-----~l~I~l~~~V~~I~~~~~~v~-V~~~~g~~~~a 143 (365)
.+++.++.+.+..... .......+.++++||+++|+++|++ +.+|++|++|++|..++++++ |++.||+++.|
T Consensus 188 ~~~g~~p~~~~~~~~~~~~~~~~~G~~~p~GG~~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~~~~~gV~~~~g~~~~a 267 (501)
T 4dgk_A 188 LLVGGNPFATSSIYTLIHALEREWGVWFPRGGTGALVQGMIKLFQDLGGEVVLNARVSHMETTGNKIEAVHLEDGRRFLT 267 (501)
T ss_dssp HHHHSCC--CCCTHHHHHHHHSCCCEEEETTHHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEEC
T ss_pred cccCCCcchhhhhhhhhhhhhccCCeEEeCCCCcchHHHHHHHHHHhCCceeeecceeEEEeeCCeEEEEEecCCcEEEc
Confidence 3456666666654432 2223455678899999999999987 457999999999999999976 99999999999
Q ss_pred CEEEEecChhhhhcCCccccCCCcHHHHHHHhhcCCc-cccEEEEEcCCCCCCCCCcceee-cCC--------------C
Q 017808 144 DAVVVAVPLGVLKARTIKFEPRLPDWKEAAIDDLGVG-IENKIIMHFDKVFWPNVEFLGVV-SDT--------------S 207 (365)
Q Consensus 144 d~VI~t~p~~~l~~~~i~f~p~Lp~~~~~ai~~~~~~-~~~kv~l~~~~~~w~~~~~~g~~-~~~--------------~ 207 (365)
|+||+|+++..+...++.- .+++....+.+++..++ +..++++.++.+... ....... .++ +
T Consensus 268 d~VV~~a~~~~~~~~Ll~~-~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~-l~~~~i~~~~~~~~~~~~~~~~~~~~ 345 (501)
T 4dgk_A 268 QAVASNADVVHTYRDLLSQ-HPAAVKQSNKLQTKRMSNSLFVLYFGLNHHHDQ-LAHHTVCFGPRYRELIDEIFNHDGLA 345 (501)
T ss_dssp SCEEECCC----------------------------CCEEEEEEEEESSCCTT-SCSEEEEEECC-------------CC
T ss_pred CEEEECCCHHHHHHHhccc-cccchhhhhhhhccccCCceeEEEecccCCccc-cccceeccccchhhhccccccccccc
Confidence 9999999988765433322 22444455667777664 456688888876421 1111110 000 0
Q ss_pred CceeEe-------eeccCCCCCceEEEEecchhh----HHHhcCCHHHHHHHHHHHHHHhc-CCCCCccEEE-e---ccC
Q 017808 208 YGCSYF-------LNLHKATGHCVLVYMPAGQLA----RDIEKMSDEAAANFAFTQLKKIL-PDASSPIQYL-V---SHW 271 (365)
Q Consensus 208 ~~~~~~-------~~~~~~~g~~~l~~~~~g~~a----~~~~~~~~~e~~~~~~~~L~~~~-~~~~~p~~~~-~---~~W 271 (365)
.....+ +....|.|+..+.+++..+.. ..|+. .++++.+.+++.|++.+ |+..+.+... + .+|
T Consensus 346 ~~~~~~v~~~s~~dp~~ap~G~~~~~~~~~~p~~~~~~~~~~~-~~~~~~~~vl~~l~~~~~P~~~~~i~~~~~~tP~~~ 424 (501)
T 4dgk_A 346 EDFSLYLHAPCVTDSSLAPEGCGSYYVLAPVPHLGTANLDWTV-EGPKLRDRIFAYLEQHYMPGLRSQLVTHRMFTPFDF 424 (501)
T ss_dssp CEEEEEEECGGGTCGGGSSTTCEEEEEEEEECCTTTSCCCHHH-HHHHHHHHHHHHHHHHTCTTHHHHEEEEEEECTTTT
T ss_pred cCCceecccCCCCCCCcCCCCCceEEEEEecCccccccccHHH-HHHHHHHHHHHHHHHhhCCChHHceEEEEECCHHHH
Confidence 001111 112346677677666543211 11222 24678888999998755 6533222211 1 134
Q ss_pred CCCCC-CCCc-CCCCC-CCCCHHHHHH-HhCCCCCEEEeccccCCCCcchhHHHHHHHHHHHHHHHHHHH
Q 017808 272 GTDAN-SLGS-YSYDT-VGKSHDLYER-LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVL 337 (365)
Q Consensus 272 ~~~~~-~~g~-y~~~~-~g~~~~~~~~-l~~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l~ 337 (365)
.+... ..|+ |...+ ..+....++. ..+|++|||+||++|+++ ++|+||+.||+.||+.|++.|+
T Consensus 425 ~~~~~~~~G~~~g~~~~~~q~~~~RP~~~~t~i~gLyl~G~~t~pG--~Gv~ga~~SG~~aA~~il~dL~ 492 (501)
T 4dgk_A 425 RDQLNAYHGSAFSVEPVLTQSAWFRPHNRDKTITNLYLVGAGTHPG--AGIPGVIGSAKATAGLMLEDLI 492 (501)
T ss_dssp C------------------------------CCTTEEECCCH--------HHHHHHHHHHHHHHHHHHHC
T ss_pred HHHcCCCCccccChhcchhhccccCCCCCCCCCCCEEEECCCCCCc--ccHHHHHHHHHHHHHHHHHHhc
Confidence 33211 1233 22211 1121112332 347899999999999984 6899999999999999999885
No 22
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=99.83 E-value=1.4e-19 Score=176.50 Aligned_cols=278 Identities=10% Similarity=0.024 Sum_probs=184.8
Q ss_pred hhCCCCCCHHHHHHHHHccCchhhhhhHHHHHHHHHHHh-hhhhcCCCCcccChhccccccc---------------cCC
Q 017808 30 EEHDEDMSIQRAISIVFDRRPELRLEGLAHKVLQWYLCR-MEGWFAADAETISLKSWDKEEL---------------LPG 93 (365)
Q Consensus 30 ~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~S~~~~~~~~~---------------~~g 93 (365)
.....+.|+.+++.+ .+++.+.+.++.+ +.++++.+++++|+.+...... ..+
T Consensus 137 ~~~~~~~s~~~~~~~-----------~~g~~l~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (513)
T 4gde_A 137 VANTKPKTFDEWIVR-----------MMGTGIADLFMRPYNFKVWAVPTTKMQCAWLGERVAAPNLKAVTTNVILGKTAG 205 (513)
T ss_dssp TCCSCCCSHHHHHHH-----------HHHHHHHHHTHHHHHHHHHSSCGGGBCSGGGCSSCCCCCHHHHHHHHHHTCCCC
T ss_pred cccccccCHHHHHHH-----------hhhhhhhhhhcchhhhhhccCChHHhhHHHHHHhhcccchhhhhhhhhhccccc
Confidence 334567899998875 4677788888776 6789999999999876432100 000
Q ss_pred ------C-ceeccCChHHHHHHHhccC-----CeecCceeEEEEecCCeeEEEEcCCcEEEcCEEEEecChhhhhcCCcc
Q 017808 94 ------G-HGLMVRGYLPVINTLAKGL-----DIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGVLKARTIK 161 (365)
Q Consensus 94 ------~-~~~~~gG~~~L~~~L~~~l-----~I~l~~~V~~I~~~~~~v~V~~~~g~~~~ad~VI~t~p~~~l~~~~i~ 161 (365)
. .+.++||+++|+++|++.+ +|++|++|++|..++++ |++.+|+++.||+||+|+|++.|....
T Consensus 206 ~~~~~~~~~~~~~gG~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~~--v~~~~G~~~~ad~vI~t~P~~~l~~~l-- 281 (513)
T 4gde_A 206 NWGPNATFRFPARGGTGGIWIAVANTLPKEKTRFGEKGKVTKVNANNKT--VTLQDGTTIGYKKLVSTMAVDFLAEAM-- 281 (513)
T ss_dssp SCBTTBEEEEESSSHHHHHHHHHHHTSCGGGEEESGGGCEEEEETTTTE--EEETTSCEEEEEEEEECSCHHHHHHHT--
T ss_pred ccccccceeecccCCHHHHHHHHHHHHHhcCeeeecceEEEEEEccCCE--EEEcCCCEEECCEEEECCCHHHHHHhc--
Confidence 0 2235799999999998866 59999999999987765 557899999999999999999987532
Q ss_pred ccCCCcHHHHHHHhhcCCccccEEEEEcCCCCCCC-CCcceeecCC---------------------CCc---eeEeeec
Q 017808 162 FEPRLPDWKEAAIDDLGVGIENKIIMHFDKVFWPN-VEFLGVVSDT---------------------SYG---CSYFLNL 216 (365)
Q Consensus 162 f~p~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~w~~-~~~~g~~~~~---------------------~~~---~~~~~~~ 216 (365)
+ ++....+...++|.++..|.+.++...... .+......+. ... ...+.+.
T Consensus 282 --~--~~~~~~~~~~l~y~~~~~v~l~~~~~~~~~~~~~~~~y~~~~~~~f~Ri~~~~n~sp~~~p~~~~~~~~~~~~~~ 357 (513)
T 4gde_A 282 --N--DQELVGLTKQLFYSSTHVIGVGVRGSRPERIGDKCWLYFPEDNCPFYRATIFSNYSPYNQPEASAALPTMQLADG 357 (513)
T ss_dssp --T--CHHHHHHHTTCCEEEEEEEEEEEESSCCTTTTTCCEEECCSTTCSCSEEECGGGTCGGGSCCTTCCEECCEETTS
T ss_pred --C--chhhHhhhhcccCCceEEEEEEEeccccccccccceeeccCCCCceeEEEecCCCCcccCCCCCceEEEEEeccC
Confidence 1 234456778899999888888887653311 1111111110 000 0011111
Q ss_pred -c---CCCCCceEEEEecchhhHHHhcCCHHHHHHHHHHHHHHhcCCC--CCccEEEeccCCCCCCCCCcCCCCCCCCCH
Q 017808 217 -H---KATGHCVLVYMPAGQLARDIEKMSDEAAANFAFTQLKKILPDA--SSPIQYLVSHWGTDANSLGSYSYDTVGKSH 290 (365)
Q Consensus 217 -~---~~~g~~~l~~~~~g~~a~~~~~~~~~e~~~~~~~~L~~~~~~~--~~p~~~~~~~W~~~~~~~g~y~~~~~g~~~ 290 (365)
. .+.+...+..++.+.....+..++++++++.++++|.++.+.. ++++...+.+| +++.+.| ..|+..
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~de~l~~~~~~~L~~~~~i~~~~~i~~~~v~r~---~~ayP~y---~~~~~~ 431 (513)
T 4gde_A 358 SRPQSTEAKEGPYWSIMLEVSESSMKPVNQETILADCIQGLVNTEMLKPTDEIVSTYHRRF---DHGYPTP---TLEREG 431 (513)
T ss_dssp CCCSCCSEECCCEEEEEEEEEEBTTBCCCTTTHHHHHHHHHHHTTSSCTTCEEEEEEEEEE---EEEEECC---BTTHHH
T ss_pred CCcccccCCcceEEEEEecccchhccCCCHHHHHHHHHHHHHHhcCCCCccceEEEEEEEC---CCeeccc---CHhHHH
Confidence 0 1112223444544444456778899999999999999997642 34466777888 4444443 344422
Q ss_pred ---HHHHHHhCCCCCEEEeccccCCCCc-chhHHHHHHHHHHHHHHHH
Q 017808 291 ---DLYERLRIPVDNLFFAGEATSMSYP-GSVHGAFSTGLMAAEDCRM 334 (365)
Q Consensus 291 ---~~~~~l~~p~~~l~~aG~~~~~~~~-g~v~gA~~SG~~aA~~i~~ 334 (365)
...+.+.. +|||++|-.-...|. +.|++|+.||..||++|+.
T Consensus 432 ~~~~~~~~l~~--~~l~~~GR~g~~~Y~~~n~D~a~~~g~~aa~~I~~ 477 (513)
T 4gde_A 432 TLTQILPKLQD--KDIWSRGRFGSWRYEVGNQDHSFMLGVEAVDNIVN 477 (513)
T ss_dssp HHHHHHHHHHH--TTEEECSTTTTCCGGGCSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhh--cCcEEecCCcccCcCCCCHHHHHHHHHHHHHHHHc
Confidence 22344444 499999965444443 5899999999999999986
No 23
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.83 E-value=2.7e-19 Score=170.29 Aligned_cols=261 Identities=14% Similarity=0.030 Sum_probs=171.2
Q ss_pred CCCHHHHHHHH-HccCchhhhhhHHHHHHHHHHHh-hhhhcCCCCcccChhcccc---ccccCCCceeccCChHHHHHHH
Q 017808 35 DMSIQRAISIV-FDRRPELRLEGLAHKVLQWYLCR-MEGWFAADAETISLKSWDK---EELLPGGHGLMVRGYLPVINTL 109 (365)
Q Consensus 35 d~s~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~S~~~~~~---~~~~~g~~~~~~gG~~~L~~~L 109 (365)
+.|+.+++.++ + ..+.++.++.+ ..++++.++.++|+..+.. .....++.+++.+|++.|+++|
T Consensus 127 ~~s~~~~l~~~g~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~gG~~~l~~~l 195 (421)
T 3nrn_A 127 EIPADEWIKEKIG-----------ENEFLLSVLESFAGWADSVSLSDLTALELAKEIRAALRWGGPGLIRGGCKAVIDEL 195 (421)
T ss_dssp CSBHHHHHHHHTC-----------CCHHHHHHHHHHHHHHHSSCGGGSBHHHHHHHHHHHHHHCSCEEETTCHHHHHHHH
T ss_pred CCCHHHHHHHhcC-----------CcHHHHHHHHHHHHHhcCCCcccCCHHHHHHHHHHHhhcCCcceecCCHHHHHHHH
Confidence 47888887764 3 22333334444 4566899999999865431 1112355678999999999999
Q ss_pred hc-----cCCeecCceeEEEEecCCeeEEEEcCCcEEEcCEEEEecChhhhhcCCccccCCCcHHHHHHHhhcCCccccE
Q 017808 110 AK-----GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRLPDWKEAAIDDLGVGIENK 184 (365)
Q Consensus 110 ~~-----~l~I~l~~~V~~I~~~~~~v~V~~~~g~~~~ad~VI~t~p~~~l~~~~i~f~p~Lp~~~~~ai~~~~~~~~~k 184 (365)
++ +++|++|++|++|..++++| | +.+|+++.||+||+|+|+..+.++ +. .+.+|+...+.++++.+++..+
T Consensus 196 ~~~~~~~G~~i~~~~~V~~i~~~~~~v-V-~~~g~~~~ad~Vv~a~~~~~~~~l-l~-~~~~~~~~~~~~~~~~~~~~~~ 271 (421)
T 3nrn_A 196 ERIIMENKGKILTRKEVVEINIEEKKV-Y-TRDNEEYSFDVAISNVGVRETVKL-IG-RDYFDRDYLKQVDSIEPSEGIK 271 (421)
T ss_dssp HHHHHTTTCEEESSCCEEEEETTTTEE-E-ETTCCEEECSEEEECSCHHHHHHH-HC-GGGSCHHHHHHHHTCCCCCEEE
T ss_pred HHHHHHCCCEEEcCCeEEEEEEECCEE-E-EeCCcEEEeCEEEECCCHHHHHHh-cC-cccCCHHHHHHHhCCCCCceEE
Confidence 86 45899999999999998898 6 457779999999999999988742 11 2457877778899999988889
Q ss_pred EEEEcCCCCCCCCCcceeec-CCCCce-eEe----eeccCCCCCceEEEEecchhhHHHhcCCHHHHHHHHHHHHHHhcC
Q 017808 185 IIMHFDKVFWPNVEFLGVVS-DTSYGC-SYF----LNLHKATGHCVLVYMPAGQLARDIEKMSDEAAANFAFTQLKKILP 258 (365)
Q Consensus 185 v~l~~~~~~w~~~~~~g~~~-~~~~~~-~~~----~~~~~~~g~~~l~~~~~g~~a~~~~~~~~~e~~~~~~~~L~~~~~ 258 (365)
+++.++++.... .+++. ++.... ..+ +....|.|+.++.+....+ ..++++..+.++++|++++|
T Consensus 272 v~l~~~~~~~~~---~~~~~~~~~~~~~i~~~s~~~p~~ap~G~~~~~~~~~~~------~~~~~~~~~~~~~~L~~~~p 342 (421)
T 3nrn_A 272 FNLAVPGEPRIG---NTIVFTPGLMINGFNEPSALDKSLAREGYTLIMAHMALK------NGNVKKAIEKGWEELLEIFP 342 (421)
T ss_dssp EEEEEESSCSSC---SSEEECTTSSSCEEECGGGTCGGGSCTTEEEEEEEEECT------TCCHHHHHHHHHHHHHHHCT
T ss_pred EEEEEcCCcccC---CeEEEcCCcceeeEeccCCCCCCcCCCCceEEEEEEeec------cccHHHHHHHHHHHHHHHcC
Confidence 999999875422 22222 221110 111 1112355665655544321 23344668999999999999
Q ss_pred CCCCccEEEeccCCCCCCCCCcCCCCCCCCCHHHHHHHhCCCCCEEEeccccCCCCcchhHHHHHHHHHHHHHH
Q 017808 259 DASSPIQYLVSHWGTDANSLGSYSYDTVGKSHDLYERLRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDC 332 (365)
Q Consensus 259 ~~~~p~~~~~~~W~~~~~~~g~y~~~~~g~~~~~~~~l~~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i 332 (365)
..+ ...+++|.. ..+.|. ..++.. .+ ..| +|||+||+++.+.++-+|+||+.||++||+.|
T Consensus 343 -~~~--~~~~~~~~~---~~p~~~-~~~~~~---~~--~~~-~gl~laGd~~~~~~g~~~~ga~~sg~~aA~~l 403 (421)
T 3nrn_A 343 -EGE--PLLAQVYRD---GNPVNR-TRAGLH---IE--WPL-NEVLVVGDGYRPPGGIEVDGIALGVMKALEKL 403 (421)
T ss_dssp -TCE--EEEEEEC-----------------C---CC--CCC-SSEEECSTTCCCTTCCHHHHHHHHHHHHHHHT
T ss_pred -CCe--EEEeeeccC---CCCccc-ccCCCC---CC--CCC-CcEEEECCcccCCCceeeehHHHHHHHHHHHh
Confidence 233 334566753 222221 111111 12 567 89999999999854446799999999999987
No 24
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.83 E-value=9.2e-19 Score=161.34 Aligned_cols=220 Identities=14% Similarity=0.156 Sum_probs=163.8
Q ss_pred ceeccCChHHHHHHHhccCCeecCceeEEEEecCCeeEEEEcCCcEEE-cCEEEEecChhhhhcCCccccCCCcHHHHHH
Q 017808 95 HGLMVRGYLPVINTLAKGLDIRLGHRVTKITRHYIGVKVTVEGGKTFV-ADAVVVAVPLGVLKARTIKFEPRLPDWKEAA 173 (365)
Q Consensus 95 ~~~~~gG~~~L~~~L~~~l~I~l~~~V~~I~~~~~~v~V~~~~g~~~~-ad~VI~t~p~~~l~~~~i~f~p~Lp~~~~~a 173 (365)
.+....|++.|.++|+++++|+++++|++|..++++|.|++.+|+.+. ||+||+|+|+..+.+. +.+ .| .....
T Consensus 102 ~~~~~~~~~~l~~~l~~g~~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~a~~vV~a~g~~~~~~~-~~~---~~-~l~~~ 176 (336)
T 1yvv_A 102 RWVGKPGMSAITRAMRGDMPVSFSCRITEVFRGEEHWNLLDAEGQNHGPFSHVIIATPAPQASTL-LAA---AP-KLASV 176 (336)
T ss_dssp EEEESSCTHHHHHHHHTTCCEECSCCEEEEEECSSCEEEEETTSCEEEEESEEEECSCHHHHGGG-GTT---CH-HHHHH
T ss_pred cEEcCccHHHHHHHHHccCcEEecCEEEEEEEeCCEEEEEeCCCcCccccCEEEEcCCHHHHHHh-hcc---CH-HHHHH
Confidence 344568999999999999999999999999999999999999997764 9999999999987653 223 22 34577
Q ss_pred HhhcCCccccEEEEEcCCCCCCCCCcceeecCCCCceeEe-eeccCCC--CC-ceEEEEecchhhHHHhcCCHHHHHHHH
Q 017808 174 IDDLGVGIENKIIMHFDKVFWPNVEFLGVVSDTSYGCSYF-LNLHKAT--GH-CVLVYMPAGQLARDIEKMSDEAAANFA 249 (365)
Q Consensus 174 i~~~~~~~~~kv~l~~~~~~w~~~~~~g~~~~~~~~~~~~-~~~~~~~--g~-~~l~~~~~g~~a~~~~~~~~~e~~~~~ 249 (365)
+..+.|+++.++.+.|++++|.....+ ..+.. ...++ .+...+. +. ..++.+..++.+..+..++++++.+.+
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~l~~~~~~p~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~l 253 (336)
T 1yvv_A 177 VAGVKMDPTWAVALAFETPLQTPMQGC--FVQDS-PLDWLARNRSKPERDDTLDTWILHATSQWSRQNLDASREQVIEHL 253 (336)
T ss_dssp HTTCCEEEEEEEEEEESSCCSCCCCEE--EECSS-SEEEEEEGGGSTTCCCSSEEEEEEECHHHHHHTTTSCHHHHHHHH
T ss_pred HhhcCccceeEEEEEecCCCCCCCCeE--EeCCC-ceeEEEecCcCCCCCCCCcEEEEEeCHHHHHHHHhCCHHHHHHHH
Confidence 889999999999999999988543322 22222 22222 2222222 21 356667777777888889999999999
Q ss_pred HHHHHHhcCC-CCCccEEEeccCCCCCCCCCcCCCCCCCCCHHHHHHHhCCCCCEEEeccccCCCCcchhHHHHHHHHHH
Q 017808 250 FTQLKKILPD-ASSPIQYLVSHWGTDANSLGSYSYDTVGKSHDLYERLRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMA 328 (365)
Q Consensus 250 ~~~L~~~~~~-~~~p~~~~~~~W~~~~~~~g~y~~~~~g~~~~~~~~l~~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~a 328 (365)
++.|.+++|. ...|.....++|. |+.+.|.... . .+..+.++|+||||+++. +++++|+.||.++
T Consensus 254 ~~~l~~~lg~~~~~p~~~~~~rw~---~a~~~~~~~~-~-------~~~~~~~rl~laGDa~~g---~gv~~a~~sg~~l 319 (336)
T 1yvv_A 254 HGAFAELIDCTMPAPVFSLAHRWL---YARPAGAHEW-G-------ALSDADLGIYVCGDWCLS---GRVEGAWLSGQEA 319 (336)
T ss_dssp HHHHHTTCSSCCCCCSEEEEEEEE---EEEESSCCCC-S-------CEEETTTTEEECCGGGTT---SSHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCCcEEEccccC---ccCCCCCCCC-C-------eeecCCCCEEEEecCCCC---CCHHHHHHHHHHH
Confidence 9999999985 4567778889995 3444443211 1 112345799999999975 5999999999999
Q ss_pred HHHHHHHH
Q 017808 329 AEDCRMRV 336 (365)
Q Consensus 329 A~~i~~~l 336 (365)
|+.|.+.+
T Consensus 320 A~~l~~~~ 327 (336)
T 1yvv_A 320 ARRLLEHL 327 (336)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHh
Confidence 99988764
No 25
>2e1m_C L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=99.81 E-value=8.9e-20 Score=152.59 Aligned_cols=112 Identities=19% Similarity=0.195 Sum_probs=100.8
Q ss_pred ceEEEEecchhhHHHhcCCHHHHHHHHHHHHHHhcCC-CCCcc-EE--EeccCCCCCCCCCcCCCCCCCCCHHHHHHHhC
Q 017808 223 CVLVYMPAGQLARDIEKMSDEAAANFAFTQLKKILPD-ASSPI-QY--LVSHWGTDANSLGSYSYDTVGKSHDLYERLRI 298 (365)
Q Consensus 223 ~~l~~~~~g~~a~~~~~~~~~e~~~~~~~~L~~~~~~-~~~p~-~~--~~~~W~~~~~~~g~y~~~~~g~~~~~~~~l~~ 298 (365)
.+|++|+.++.+..+..++++++++.++++|+++|+. . .+. .+ ..++|.++||++|+|++..+|......+.+.+
T Consensus 37 ~~L~~~~~g~~A~~~~~l~~~e~~~~~l~~L~~~~g~~~-~~~~~~~~~~~~W~~dp~~~Ga~s~~~pg~~~~~~~~l~~ 115 (181)
T 2e1m_C 37 VVLAAYSWSDDAARWDSFDDAERYGYALENLQSVHGRRI-EVFYTGAGQTQSWLRDPYACGEAAVYTPHQMTAFHLDVVR 115 (181)
T ss_dssp EEEEEEEEHHHHHHHTTSCTTTTHHHHHHHHHHHHCGGG-GGTEEEEEEEEESSSCTTTSSSEECCCTTHHHHHHHHHHS
T ss_pred EEEEEEcCChHHHHHHcCCHHHHHHHHHHHHHHHhCCCc-HhhccCcceecccCCCCCCCCcccCcCCCchHHHHHHHhC
Confidence 5888999999899999999999999999999999964 4 555 57 88999999999999998889886667788999
Q ss_pred CCCCEEEeccccCCCCcchhHHHHHHHHHHHHHHHHHH
Q 017808 299 PVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRV 336 (365)
Q Consensus 299 p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l 336 (365)
|.++||||||+|+. +.|+|+||++||++||++|++.+
T Consensus 116 p~grl~FAGe~ts~-~~g~~eGAl~SG~raA~~i~~~l 152 (181)
T 2e1m_C 116 PEGPVYFAGEHVSL-KHAWIEGAVETAVRAAIAVNEAP 152 (181)
T ss_dssp CBTTEEECSGGGTT-STTSHHHHHHHHHHHHHHHHTCC
T ss_pred CCCcEEEEEHHHcC-CccCHHHHHHHHHHHHHHHHHHh
Confidence 99999999999996 89999999999999999998765
No 26
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=99.75 E-value=1.4e-17 Score=158.59 Aligned_cols=266 Identities=13% Similarity=0.075 Sum_probs=162.0
Q ss_pred CCCHHHHHHHHHccCchhhhhhHHHHHHHHHHHh-hhhhcCCCCcccChhccccccc-------cCCCceeccCChHHHH
Q 017808 35 DMSIQRAISIVFDRRPELRLEGLAHKVLQWYLCR-MEGWFAADAETISLKSWDKEEL-------LPGGHGLMVRGYLPVI 106 (365)
Q Consensus 35 d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~S~~~~~~~~~-------~~g~~~~~~gG~~~L~ 106 (365)
++|+.+++.+.. .. .+.+.+..+ +...++ ++.++|+.++..+.. ..++.+.+.+|+++++
T Consensus 142 ~~s~~~~l~~~~----------~~-~~~~~~~~~~~~~~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~ 209 (424)
T 2b9w_A 142 MLPFDEFLALNG----------CE-AARDLWINPFTAFGYG-HFDNVPAAYVLKYLDFVTMMSFAKGDLWTWADGTQAMF 209 (424)
T ss_dssp GSBHHHHHHHTT----------CG-GGHHHHTTTTCCCCCC-CTTTSBHHHHHHHSCHHHHHHHHHTCCBCCTTCHHHHH
T ss_pred ccCHHHHHHhhC----------cH-HHHHHHHHHHHhhccC-ChHhcCHHHHHHhhhHhhhhcccCCceEEeCChHHHHH
Confidence 468888877532 11 122334344 334444 678888866432111 2345667899999999
Q ss_pred HHHhccC--CeecCceeEEEEecCCeeEEEEcCCcEEEcCEEEEecChhhhhcCCccccCCCcHHHHHHHhhcCCccccE
Q 017808 107 NTLAKGL--DIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRLPDWKEAAIDDLGVGIENK 184 (365)
Q Consensus 107 ~~L~~~l--~I~l~~~V~~I~~~~~~v~V~~~~g~~~~ad~VI~t~p~~~l~~~~i~f~p~Lp~~~~~ai~~~~~~~~~k 184 (365)
++|.+.+ +|++|++|++|..++++|.|++.+|+ +.||+||+|+|+..+.+ +.|++|+.+ +.+.++.+.++.
T Consensus 210 ~~l~~~l~~~v~~~~~V~~i~~~~~~v~v~~~~g~-~~ad~Vv~a~~~~~~~~----~l~~~~~~~-~~~~~~~~~~~~- 282 (424)
T 2b9w_A 210 EHLNATLEHPAERNVDITRITREDGKVHIHTTDWD-RESDVLVLTVPLEKFLD----YSDADDDER-EYFSKIIHQQYM- 282 (424)
T ss_dssp HHHHHHSSSCCBCSCCEEEEECCTTCEEEEESSCE-EEESEEEECSCHHHHTT----SBCCCHHHH-HHHTTCEEEEEE-
T ss_pred HHHHHhhcceEEcCCEEEEEEEECCEEEEEECCCe-EEcCEEEECCCHHHHhh----ccCCCHHHH-HHHhcCCcceeE-
Confidence 9999876 69999999999998889999998884 89999999999998743 235556544 356777665543
Q ss_pred EEEEcCCCCCCCCCcceeecCC----CC-ceeEeeeccCCCCCceEEEEecchhhHHHhcCCHHHHHHHHHHHHHHhcCC
Q 017808 185 IIMHFDKVFWPNVEFLGVVSDT----SY-GCSYFLNLHKATGHCVLVYMPAGQLARDIEKMSDEAAANFAFTQLKKILPD 259 (365)
Q Consensus 185 v~l~~~~~~w~~~~~~g~~~~~----~~-~~~~~~~~~~~~g~~~l~~~~~g~~a~~~~~~~~~e~~~~~~~~L~~~~~~ 259 (365)
+.+.+...++ .+.++.+.. .. ...++....+.+...++++|+.+. ...+...+++++++.+++.|++ ++.
T Consensus 283 ~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~v~~~l~~-l~~ 357 (424)
T 2b9w_A 283 VDACLVKEYP---TISGYVPDNMRPERLGHVMVYYHRWADDPHQIITTYLLRN-HPDYADKTQEECRQMVLDDMET-FGH 357 (424)
T ss_dssp EEEEEESSCC---SSEEECGGGGSGGGTTSCCEEEECCTTCTTSCEEEEEECC-BTTBCCCCHHHHHHHHHHHHHH-TTC
T ss_pred EEEEEeccCC---cccccccCCCCCcCCCcceEEeeecCCCCceEEEEEeccC-CCcccccChHHHHHHHHHHHHH-cCC
Confidence 2222222222 122333221 00 112222222223345777777653 3456678899999999999998 443
Q ss_pred CCCccEEEeccCCCCCC-CCCcCCCCCCCCCHHHHHHHhCCCCCEEEeccccCCCCcchhHHHHHHHHHHHHHHH
Q 017808 260 ASSPIQYLVSHWGTDAN-SLGSYSYDTVGKSHDLYERLRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCR 333 (365)
Q Consensus 260 ~~~p~~~~~~~W~~~~~-~~g~y~~~~~g~~~~~~~~l~~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~ 333 (365)
..+......+|...|. +...| ..|.. . ...-.++.+|+||||++++. |++|+|+.||.++|++|+
T Consensus 358 -~~~~~~~~~~w~~~p~~~~~~~---~~G~~-~-~~~~~~~~~~l~~aG~~~~~---g~~e~a~~Sg~~aA~~~l 423 (424)
T 2b9w_A 358 -PVEKIIEEQTWYYFPHVSSEDY---KAGWY-E-KVEGMQGRRNTFYAGEIMSF---GNFDEVCHYSKDLVTRFF 423 (424)
T ss_dssp -CEEEEEEEEEEEEEEECCHHHH---HTTHH-H-HHHHTTTGGGEEECSGGGSC---SSHHHHHHHHHHHHHHHT
T ss_pred -cccccccccceeeeeccCHHHH---hccHH-H-HHHHHhCCCCceEecccccc---ccHHHHHHHHHHHHHHhc
Confidence 1111222346643221 00000 11111 1 11123445799999999874 689999999999999875
No 27
>2e1m_B L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=99.52 E-value=3.2e-16 Score=122.03 Aligned_cols=107 Identities=18% Similarity=0.224 Sum_probs=69.0
Q ss_pred cEEEcCEEEEecChhhhhcCCccccCCCcHHHHHHHhhcCCccccEEEEEcCCCCCCCCCcceeecCCCCceeEeeeccC
Q 017808 139 KTFVADAVVVAVPLGVLKARTIKFEPRLPDWKEAAIDDLGVGIENKIIMHFDKVFWPNVEFLGVVSDTSYGCSYFLNLHK 218 (365)
Q Consensus 139 ~~~~ad~VI~t~p~~~l~~~~i~f~p~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~w~~~~~~g~~~~~~~~~~~~~~~~~ 218 (365)
++++||+||+|+|+++|+ .|.|.|+||+.+.+++++++||...|+++.|+++||++....| .+...
T Consensus 4 ~~~~Ad~VIvTvP~~vL~--~I~F~P~LP~~k~~Ai~~l~~g~~~Kv~l~f~~~FW~~~~~~g------------d~s~~ 69 (130)
T 2e1m_B 4 QTWTGDLAIVTIPFSSLR--FVKVTPPFSYKKRRAVIETHYDQATKVLLEFSRRWWEFTEADW------------KRELD 69 (130)
T ss_dssp EEEEESEEEECSCHHHHT--TSEEESCCCHHHHHHHHHCCEECEEEEEEEESSCGGGCCHHHH------------HHHHH
T ss_pred eEEEcCEEEEcCCHHHHh--cCcCCCCCCHHHHHHHHhCCCcceeEEEEEECCCCCCCCCccc------------cccCC
Confidence 478999999999999998 6899999999999999999999999999999999997543222 11111
Q ss_pred CCCCceEEEEe-cchhhHHHhcCCHHHHHHHHHHHHHHhcCCC
Q 017808 219 ATGHCVLVYMP-AGQLARDIEKMSDEAAANFAFTQLKKILPDA 260 (365)
Q Consensus 219 ~~g~~~l~~~~-~g~~a~~~~~~~~~e~~~~~~~~L~~~~~~~ 260 (365)
+.+.+++++|+ +|+.+..|..+++ +-++.++..|.+++|++
T Consensus 70 ~~~pg~l~~f~~wg~~A~~~~~l~~-~~r~~~~~~l~~~~p~~ 111 (130)
T 2e1m_B 70 AIAPGLYDYYQQWGEDDAEAALALP-QSVRNLPTGLLGAHPSV 111 (130)
T ss_dssp HHSTTHHHHHHHHCCCSCCCC----------------------
T ss_pred CCCCeEEEEecccCHHHHHHhcCCH-HHHHHHHHHHHHhCCCC
Confidence 12234788888 4888888888875 67788999999999864
No 28
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=99.36 E-value=2.7e-13 Score=127.91 Aligned_cols=126 Identities=13% Similarity=0.128 Sum_probs=88.0
Q ss_pred CCCCHHHHHHHHHccCchhhhhhHHHHHHHHHHHh-hhhhcCCCCcccChhccc--c-ccc-----cCCCc-eeccCChH
Q 017808 34 EDMSIQRAISIVFDRRPELRLEGLAHKVLQWYLCR-MEGWFAADAETISLKSWD--K-EEL-----LPGGH-GLMVRGYL 103 (365)
Q Consensus 34 ~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~S~~~~~--~-~~~-----~~g~~-~~~~gG~~ 103 (365)
.+.|+.+++.+. +++.+++.++.+ ..++++.+++++|+..+. . ... +.... .+++||++
T Consensus 137 ~~~s~~e~l~~~-----------~g~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~p~gG~~ 205 (399)
T 1v0j_A 137 DAQNLEEKAISL-----------IGRPLYEAFVKGYTAKQWQTDPKELPAANITRLPVRYTFDNRYFSDTYEGLPTDGYT 205 (399)
T ss_dssp C----CCHHHHH-----------HCHHHHHHHTHHHHHHHHTSCGGGSCGGGCSCCCCCSSSCCCSCCCSEEECBTTHHH
T ss_pred CcccHHHHHHHH-----------HhHHHHHHHHHHHHHhhcCCChhhcChHhhhcceeEeccccchhhhhhcccccccHH
Confidence 467888887753 455677777776 568899999999987752 1 111 11112 27899999
Q ss_pred HHHHHHhccC--CeecCceeEEEEecCCeeEEEEcCCcEE-EcCEEEEecChhhhhcCCccccCCCcHHHHHHHhhcCCc
Q 017808 104 PVINTLAKGL--DIRLGHRVTKITRHYIGVKVTVEGGKTF-VADAVVVAVPLGVLKARTIKFEPRLPDWKEAAIDDLGVG 180 (365)
Q Consensus 104 ~L~~~L~~~l--~I~l~~~V~~I~~~~~~v~V~~~~g~~~-~ad~VI~t~p~~~l~~~~i~f~p~Lp~~~~~ai~~~~~~ 180 (365)
+|+++|++.+ +|++|++|++|... | + ++ .||+||+|+|+..+... .+.+++|.
T Consensus 206 ~l~~~l~~~~g~~I~l~~~V~~I~~~---v-----~--~~~~aD~VI~t~p~~~l~~~--------------~l~~l~y~ 261 (399)
T 1v0j_A 206 AWLQNMAADHRIEVRLNTDWFDVRGQ---L-----R--PGSPAAPVVYTGPLDRYFDY--------------AEGRLGWR 261 (399)
T ss_dssp HHHHHHTCSTTEEEECSCCHHHHHHH---H-----T--TTSTTCCEEECSCHHHHTTT--------------TTCCCCEE
T ss_pred HHHHHHHhcCCeEEEECCchhhhhhh---h-----h--hcccCCEEEECCcHHHHHhh--------------hhCCCCcc
Confidence 9999999854 69999999999753 2 1 34 69999999999987632 23467888
Q ss_pred cccEEEEEcCCCCC
Q 017808 181 IENKIIMHFDKVFW 194 (365)
Q Consensus 181 ~~~kv~l~~~~~~w 194 (365)
++..+.+.++.+.+
T Consensus 262 s~~~~~~~~~~~~~ 275 (399)
T 1v0j_A 262 TLDFEVEVLPIGDF 275 (399)
T ss_dssp EEEEEEEEESSSCS
T ss_pred eEEEEEEEEccccC
Confidence 87778888887543
No 29
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=99.28 E-value=1.3e-11 Score=114.93 Aligned_cols=126 Identities=13% Similarity=0.129 Sum_probs=94.2
Q ss_pred CCCCCHHHHHHHHHccCchhhhhhHHHHHHHHHHHh-hhhhcCCCCcccChhccc--cccc------cCCCc-eeccCCh
Q 017808 33 DEDMSIQRAISIVFDRRPELRLEGLAHKVLQWYLCR-MEGWFAADAETISLKSWD--KEEL------LPGGH-GLMVRGY 102 (365)
Q Consensus 33 ~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~S~~~~~--~~~~------~~g~~-~~~~gG~ 102 (365)
..+.|+.+++.+ .+++.+.+.++.+ ..+++|.+++++|+..+. .... +.+.. .+++||+
T Consensus 126 ~~~~s~~~~~~~-----------~~g~~~~~~~~~p~~~~~~~~~~~~lsa~~~~~l~~~~~~~~~~~~~~~~~~p~gG~ 194 (367)
T 1i8t_A 126 KVPENLEEQAIS-----------LVGEDLYQALIKGYTEKQWGRSAKELPAFIIKRIPVRFTFDNNYFSDRYQGIPVGGY 194 (367)
T ss_dssp CCCCSHHHHHHH-----------HHHHHHHHHHTHHHHHHHHSSCGGGSCTTSSCCCCBCSSSCCCSCCCSEEECBTTCH
T ss_pred CCCccHHHHHHH-----------HHhHHHHHHHHHHHHhhhhCCChHHcCHHHHhhceeeeccccccccchhhcccCCCH
Confidence 357899998876 3677788888877 678999999999987652 1111 12222 2789999
Q ss_pred HHHHHHHhccCCeecCceeEEEEecCCeeEEEEcCCcEEEcCEEEEecChhhhhcCCccccCCCcHHHHHHHhhcCCccc
Q 017808 103 LPVINTLAKGLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRLPDWKEAAIDDLGVGIE 182 (365)
Q Consensus 103 ~~L~~~L~~~l~I~l~~~V~~I~~~~~~v~V~~~~g~~~~ad~VI~t~p~~~l~~~~i~f~p~Lp~~~~~ai~~~~~~~~ 182 (365)
++|+++|+++++|++|++|++|.. +| ...||+||+|+|+..+... .+.+++|.++
T Consensus 195 ~~l~~~l~~g~~i~l~~~V~~i~~---~v--------~~~~D~VV~a~p~~~~~~~--------------~l~~l~y~s~ 249 (367)
T 1i8t_A 195 TKLIEKMLEGVDVKLGIDFLKDKD---SL--------ASKAHRIIYTGPIDQYFDY--------------RFGALEYRSL 249 (367)
T ss_dssp HHHHHHHHTTSEEECSCCGGGSHH---HH--------HTTEEEEEECSCHHHHTTT--------------TTCCCCEEEE
T ss_pred HHHHHHHhcCCEEEeCCceeeech---hh--------hccCCEEEEeccHHHHHHH--------------hhCCCCCceE
Confidence 999999999989999999998863 12 1358999999999987531 2446788888
Q ss_pred cEEEEEcCCCCC
Q 017808 183 NKIIMHFDKVFW 194 (365)
Q Consensus 183 ~kv~l~~~~~~w 194 (365)
..+.+.++.+..
T Consensus 250 ~~v~~~~d~~~~ 261 (367)
T 1i8t_A 250 KFETERHEFPNF 261 (367)
T ss_dssp EEEEEEESSSCS
T ss_pred EEEEEEeccccC
Confidence 878888887643
No 30
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=99.24 E-value=6e-11 Score=111.15 Aligned_cols=118 Identities=9% Similarity=0.162 Sum_probs=87.8
Q ss_pred CCCCCHHHHHHHHHccCchhhhhhHHHHHHHHHHHh-hhhhcCCCCcccChhccc--c------ccccCCCc-eeccCCh
Q 017808 33 DEDMSIQRAISIVFDRRPELRLEGLAHKVLQWYLCR-MEGWFAADAETISLKSWD--K------EELLPGGH-GLMVRGY 102 (365)
Q Consensus 33 ~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~S~~~~~--~------~~~~~g~~-~~~~gG~ 102 (365)
..+.|+.+++.+. +++.+++.++.+ ..++|+.+++++|+..+. . ...+.+.. .+++||+
T Consensus 130 ~~~~sl~e~~~~~-----------~g~~~~~~~~~p~~~~~~~~~~~~ls~~~~~r~~~~~~~~~~~~~~~~~~~p~gG~ 198 (384)
T 2bi7_A 130 ADPQTFEEEALRF-----------IGKELYEAFFKGYTIKQWGMQPSELPASILKRLPVRFNYDDNYFNHKFQGMPKCGY 198 (384)
T ss_dssp SSCCBHHHHHHHH-----------HCHHHHHHHTHHHHHHHHSSCGGGSBGGGCCSCCCCSSSCCCSCCCSEEEEETTHH
T ss_pred CCCcCHHHHHHHh-----------hcHHHHHHHHHHHHHHHhCCCHHHhCHHHHhccccccccccccccccccEEECcCH
Confidence 3578999988763 456777778776 678999999999987642 0 01122222 2889999
Q ss_pred HHHHHHHhcc--CCeecCceeE-EEEecCCeeEEEEcCCcEEEcCEEEEecChhhhhcCCccccCCCcHHHHHHHhhcCC
Q 017808 103 LPVINTLAKG--LDIRLGHRVT-KITRHYIGVKVTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRLPDWKEAAIDDLGV 179 (365)
Q Consensus 103 ~~L~~~L~~~--l~I~l~~~V~-~I~~~~~~v~V~~~~g~~~~ad~VI~t~p~~~l~~~~i~f~p~Lp~~~~~ai~~~~~ 179 (365)
++|+++|++. .+|++|++|+ +|.. .||+||+|+|+..+... .+.+++|
T Consensus 199 ~~l~~~l~~~~g~~I~l~~~V~~~i~~---------------~~d~VI~a~p~~~~~~~--------------~lg~l~y 249 (384)
T 2bi7_A 199 TQMIKSILNHENIKVDLQREFIVEERT---------------HYDHVFYSGPLDAFYGY--------------QYGRLGY 249 (384)
T ss_dssp HHHHHHHHCSTTEEEEESCCCCGGGGG---------------GSSEEEECSCHHHHTTT--------------TTCCCCE
T ss_pred HHHHHHHHhcCCCEEEECCeeehhhhc---------------cCCEEEEcCCHHHHHHh--------------hcCCCCc
Confidence 9999999984 4799999999 8853 29999999999997642 1345788
Q ss_pred ccccEEEEEcC
Q 017808 180 GIENKIIMHFD 190 (365)
Q Consensus 180 ~~~~kv~l~~~ 190 (365)
.+...+.+.++
T Consensus 250 ~s~~~v~~~~d 260 (384)
T 2bi7_A 250 RTLDFKKFTYQ 260 (384)
T ss_dssp EEEEEEEEEEE
T ss_pred ceEEEEEEEeC
Confidence 88777788886
No 31
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.96 E-value=9.4e-09 Score=96.11 Aligned_cols=125 Identities=6% Similarity=0.081 Sum_probs=93.2
Q ss_pred CCCCCCHHHHHHHHHccCchhhhhhHHHHHHHHHHHh-hhhhcCCCCcccChhcccc---cc-----ccCCCc-eeccCC
Q 017808 32 HDEDMSIQRAISIVFDRRPELRLEGLAHKVLQWYLCR-MEGWFAADAETISLKSWDK---EE-----LLPGGH-GLMVRG 101 (365)
Q Consensus 32 ~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~S~~~~~~---~~-----~~~g~~-~~~~gG 101 (365)
...+.|+.+++.+ .+++++.+.++.+ +.+.||.+++++|+.++.. .. .+.+.. .++++|
T Consensus 153 ~~~~~s~~e~~~~-----------~~G~~~~e~~~~py~~k~~~~~~~~Lsa~~~~Rvp~~~~~d~~yf~~~~qg~P~gG 221 (397)
T 3hdq_A 153 VEQVRTSEDVVVS-----------KVGRDLYNKFFRGYTRKQWGLDPSELDASVTARVPTRTNRDNRYFADTYQAMPLHG 221 (397)
T ss_dssp CSSCCBHHHHHHH-----------HHHHHHHHHHTHHHHHHHHSSCGGGSBTTTGGGSCCCSSCCCBSCCCSEEEEETTC
T ss_pred CCCCcCHHHHHHH-----------hcCHHHHHHHHHHHhCchhCCCHHHHHHHHHHhcCcccccCccchhhhheeccCCC
Confidence 3467899999876 4678889988887 7899999999999875431 00 112222 368999
Q ss_pred hHHHHHHHhc--cCCeecCceeEEEEecCCeeEEEEcCCcEEEcCEEEEecChhhhhcCCccccCCCcHHHHHHHhhcCC
Q 017808 102 YLPVINTLAK--GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRLPDWKEAAIDDLGV 179 (365)
Q Consensus 102 ~~~L~~~L~~--~l~I~l~~~V~~I~~~~~~v~V~~~~g~~~~ad~VI~t~p~~~l~~~~i~f~p~Lp~~~~~ai~~~~~ 179 (365)
+.+|+++|++ +++|+||++|+++ +.++.+|+||+|+|+..+... ...+++|
T Consensus 222 y~~l~e~l~~~~g~~V~l~~~v~~~-------------~~~~~~d~vI~T~P~d~~~~~--------------~~g~L~y 274 (397)
T 3hdq_A 222 YTRMFQNMLSSPNIKVMLNTDYREI-------------ADFIPFQHMIYTGPVDAFFDF--------------CYGKLPY 274 (397)
T ss_dssp HHHHHHHHTCSTTEEEEESCCGGGT-------------TTTSCEEEEEECSCHHHHTTT--------------TTCCCCE
T ss_pred HHHHHHHHHhccCCEEEECCeEEec-------------cccccCCEEEEcCCHHHHHHH--------------hcCCCCC
Confidence 9999999998 5579999999733 345679999999999887421 2446778
Q ss_pred ccccEEEEEcCCCCC
Q 017808 180 GIENKIIMHFDKVFW 194 (365)
Q Consensus 180 ~~~~kv~l~~~~~~w 194 (365)
.++..+.+.++...+
T Consensus 275 rsl~~~~~~~~~~~~ 289 (397)
T 3hdq_A 275 RSLEFRHETHDTEQL 289 (397)
T ss_dssp EEEEEEEEEESSSCS
T ss_pred ceEEEEEEEeccccC
Confidence 888778888886644
No 32
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.36 E-value=6e-06 Score=78.82 Aligned_cols=58 Identities=16% Similarity=0.014 Sum_probs=48.7
Q ss_pred ceeccCChHHHHHHHhc-----cCCeecCceeEEEEec--CCee-EEEEcCCcEEEcCEEEEecChh
Q 017808 95 HGLMVRGYLPVINTLAK-----GLDIRLGHRVTKITRH--YIGV-KVTVEGGKTFVADAVVVAVPLG 153 (365)
Q Consensus 95 ~~~~~gG~~~L~~~L~~-----~l~I~l~~~V~~I~~~--~~~v-~V~~~~g~~~~ad~VI~t~p~~ 153 (365)
..++.||++.|+++|++ +.+|++|++|++|..+ ++++ .|++ +|+++.||+||+|+++.
T Consensus 234 ~~~p~gG~~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~-~g~~~~ad~VV~a~~~~ 299 (453)
T 2bcg_G 234 YLYPMYGLGELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKT-KLGTFKAPLVIADPTYF 299 (453)
T ss_dssp EEEETTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEE-TTEEEECSCEEECGGGC
T ss_pred eEeeCCCHHHHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEE-CCeEEECCEEEECCCcc
Confidence 33889999999999976 4579999999999987 6765 4666 58889999999999875
No 33
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.20 E-value=4e-06 Score=79.92 Aligned_cols=110 Identities=9% Similarity=0.025 Sum_probs=71.9
Q ss_pred CCCCHHHHHHHHHccCchhhhhhHHHHHHHHHHHhhhhhcCCCCcccChhcccc----c----ccc-CCCceeccCChHH
Q 017808 34 EDMSIQRAISIVFDRRPELRLEGLAHKVLQWYLCRMEGWFAADAETISLKSWDK----E----ELL-PGGHGLMVRGYLP 104 (365)
Q Consensus 34 ~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~S~~~~~~----~----~~~-~g~~~~~~gG~~~ 104 (365)
.+.|+.++++++ ++.+.+.+.++..+......++.+.|+...+. + ..+ .....+++||++.
T Consensus 188 ~~~s~~e~l~~~----------gls~~l~~fl~~alaL~~~~~~~~~~a~~~l~ri~~y~~Sl~~yg~s~~~yp~gG~~~ 257 (475)
T 3p1w_A 188 YKLTMLEIYKHF----------NLCQLTIDFLGHAVALYLNDDYLKQPAYLTLERIKLYMQSISAFGKSPFIYPLYGLGG 257 (475)
T ss_dssp TTSBHHHHHHHT----------TCCHHHHHHHHHHTSCCSSSGGGGSBHHHHHHHHHHHHHHHHHHSSCSEEEETTCTTH
T ss_pred cCCCHHHHHHHc----------CCCHHHHHHHHHHHHhhcCCCcccCCHHHHHHHHHHHHHHHhhcCCCceEEECCCHHH
Confidence 467899987753 34445555443333222222344455533221 1 012 2345688999999
Q ss_pred HHHHHhc-----cCCeecCceeEEEEe-cCCee-EEEEcCCcEEEcCEEEEecChh
Q 017808 105 VINTLAK-----GLDIRLGHRVTKITR-HYIGV-KVTVEGGKTFVADAVVVAVPLG 153 (365)
Q Consensus 105 L~~~L~~-----~l~I~l~~~V~~I~~-~~~~v-~V~~~~g~~~~ad~VI~t~p~~ 153 (365)
|+++|++ +++|+++++|++|.. .++++ .|++.+|+++.||+||++....
T Consensus 258 L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 258 IPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDPSYV 313 (475)
T ss_dssp HHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECGGGC
T ss_pred HHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECCCcc
Confidence 9999976 568999999999998 55554 5889999899999999998653
No 34
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=98.18 E-value=7.7e-06 Score=77.58 Aligned_cols=60 Identities=13% Similarity=0.003 Sum_probs=51.1
Q ss_pred ceeccCChHHHHHHHhc-----cCCeecCceeEEEEecCCeeEEEEcCCcEEEcCEEEEecChhh
Q 017808 95 HGLMVRGYLPVINTLAK-----GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGV 154 (365)
Q Consensus 95 ~~~~~gG~~~L~~~L~~-----~l~I~l~~~V~~I~~~~~~v~V~~~~g~~~~ad~VI~t~p~~~ 154 (365)
.+++.||++.|+++|++ +.+|++|++|++|..+++++.+...+|+++.||+||+|+|+..
T Consensus 226 ~~~p~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~v~~v~~~g~~~~ad~VV~a~~~~~ 290 (433)
T 1d5t_A 226 YLYPLYGLGELPQGFARLSAIYGGTYMLNKPVDDIIMENGKVVGVKSEGEVARCKQLICDPSYVP 290 (433)
T ss_dssp EEEETTCTTHHHHHHHHHHHHHTCCCBCSCCCCEEEEETTEEEEEEETTEEEECSEEEECGGGCG
T ss_pred EEEeCcCHHHHHHHHHHHHHHcCCEEECCCEEEEEEEeCCEEEEEEECCeEEECCEEEECCCCCc
Confidence 55889999999999976 5689999999999998888774345788999999999998764
No 35
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.00 E-value=0.0008 Score=58.19 Aligned_cols=219 Identities=13% Similarity=0.118 Sum_probs=112.0
Q ss_pred ccCChHHHHHHHhccCCeecCceeEEEEecCCeeEEEEcCCcEE-EcCEEEEecChhhhhcCCccccCCCcHHHHHHHhh
Q 017808 98 MVRGYLPVINTLAKGLDIRLGHRVTKITRHYIGVKVTVEGGKTF-VADAVVVAVPLGVLKARTIKFEPRLPDWKEAAIDD 176 (365)
Q Consensus 98 ~~gG~~~L~~~L~~~l~I~l~~~V~~I~~~~~~v~V~~~~g~~~-~ad~VI~t~p~~~l~~~~i~f~p~Lp~~~~~ai~~ 176 (365)
...+.............+.............+...+....+... ....++.+........ .. . ...........
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~-~~~~~~~~~~~ 179 (336)
T 3kkj_A 105 GKPGMSAITRAMRGDMPVSFSCRITEVFRGEEHWNLLDAEGQNHGPFSHVIIATPAPQAST-LL---A-AAPKLASVVAG 179 (336)
T ss_dssp ESSSTHHHHHHHHTTCCEECSCCEEEEEECSSCEEEEETTSCEEEEESCEEECSCHHHHGG-GG---T-TCHHHHHHHTT
T ss_pred cccccccchhcccccceeecceeecccccccccccccccccccccccccceeccccchhhh-hh---c-ccccccccccc
Confidence 34566666666666667777777777777777766666665443 3444555554443321 11 1 11111222222
Q ss_pred cCCccccEEEEEcCCCCCCCCCcceeecCCCCceeEeeeccC--C-CCCceEEEEecchhhHHHhcCCHHHHHHHHHHHH
Q 017808 177 LGVGIENKIIMHFDKVFWPNVEFLGVVSDTSYGCSYFLNLHK--A-TGHCVLVYMPAGQLARDIEKMSDEAAANFAFTQL 253 (365)
Q Consensus 177 ~~~~~~~kv~l~~~~~~w~~~~~~g~~~~~~~~~~~~~~~~~--~-~g~~~l~~~~~g~~a~~~~~~~~~e~~~~~~~~L 253 (365)
............+....+..... .. ............... . ........................+..+.....+
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (336)
T 3kkj_A 180 VKMDPTWAVALAFETPLQTPMQG-CF-VQDSPLDWLARNRSKPERDDTLDTWILHATSQWSRQNLDASREQVIEHLHGAF 257 (336)
T ss_dssp CCEEEEEEEEEEESSCCSCCCCE-EE-ECSSSEEEEEEGGGSTTCCCSSEEEEEEECHHHHHHTTTSCHHHHHHHHHHHH
T ss_pred cccccchhhhhcccccccccccc-cc-ccccccccccccccccccccccccceeccccccccccccccchhhhhhhhhhh
Confidence 22223333334444333211111 11 111110111111111 1 1111222233333333344455666777777777
Q ss_pred HHhcCC-CCCccEEEeccCCCCCCCCCcCCCCCCCCCHHHHHHHhCCCCCEEEeccccCCCCcchhHHHHHHHHHHHHHH
Q 017808 254 KKILPD-ASSPIQYLVSHWGTDANSLGSYSYDTVGKSHDLYERLRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDC 332 (365)
Q Consensus 254 ~~~~~~-~~~p~~~~~~~W~~~~~~~g~y~~~~~g~~~~~~~~l~~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i 332 (365)
...++. ...+.....++|. |+.+..... ... ...+.+|||+|||++.+ +++++|+.||+.||+.|
T Consensus 258 ~~~~~~~~~~~~~~~~~~w~---~a~~~~~~~-~~~-------~~~~~~~v~l~GDa~~g---~gv~~A~~sG~~aA~~I 323 (336)
T 3kkj_A 258 AELIDCTMPAPVFSLAHRWL---YARPAGAHE-WGA-------LSDADLGIYVCGDWCLS---GRVEGAWLSGQEAARRL 323 (336)
T ss_dssp HTTCSSCCCCCSEEEEEEEE---EEEESSCCC-CSS-------EEETTTTEEECCGGGTT---SSHHHHHHHHHHHHHHH
T ss_pred hhhccCCcCcchheecccee---ecccccccC-ccc-------eeeCCCCEEEEecccCC---cCHHHHHHHHHHHHHHH
Confidence 777654 5567777788883 332222111 111 12345799999999875 57999999999999999
Q ss_pred HHHHH
Q 017808 333 RMRVL 337 (365)
Q Consensus 333 ~~~l~ 337 (365)
++.|.
T Consensus 324 ~~~L~ 328 (336)
T 3kkj_A 324 LEHLQ 328 (336)
T ss_dssp HHHTT
T ss_pred HHHhh
Confidence 98875
No 36
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=97.79 E-value=3.1e-05 Score=76.28 Aligned_cols=86 Identities=12% Similarity=0.057 Sum_probs=63.9
Q ss_pred CCceeccCChHHHHHHHhc-----cCCeecCceeEEEEecC--CeeE-EEEcCCcEEEcCEEEEecChhhhhcCCccccC
Q 017808 93 GGHGLMVRGYLPVINTLAK-----GLDIRLGHRVTKITRHY--IGVK-VTVEGGKTFVADAVVVAVPLGVLKARTIKFEP 164 (365)
Q Consensus 93 g~~~~~~gG~~~L~~~L~~-----~l~I~l~~~V~~I~~~~--~~v~-V~~~~g~~~~ad~VI~t~p~~~l~~~~i~f~p 164 (365)
++..++.||++.|+++|++ +..|+++++|++|..++ +++. |++.+|+++.||+||++. ..+ |
T Consensus 368 sg~~yp~GG~g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~~--~~l--------p 437 (650)
T 1vg0_A 368 TPFLFPLYGQGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIED--SYL--------S 437 (650)
T ss_dssp SSEEEETTCTTHHHHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEEG--GGB--------C
T ss_pred CceEEeCCchhHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEECh--hhc--------C
Confidence 4677899999999999976 55799999999999876 5554 666789999999999932 222 2
Q ss_pred CCcHHHHHHHhhcCCccccEEEEEcCCCCC
Q 017808 165 RLPDWKEAAIDDLGVGIENKIIMHFDKVFW 194 (365)
Q Consensus 165 ~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~w 194 (365)
.. . .+++.++.+.++++.++++.-
T Consensus 438 ~~---~---~~~~~~~~v~R~i~i~~~pi~ 461 (650)
T 1vg0_A 438 EN---T---CSRVQYRQISRAVLITDGSVL 461 (650)
T ss_dssp TT---T---TTTCCCEEEEEEEEEESSCSS
T ss_pred Hh---H---hccccccceEEEEEEecCCCC
Confidence 11 1 123356778888888888754
No 37
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.28 E-value=0.00037 Score=64.44 Aligned_cols=74 Identities=16% Similarity=0.008 Sum_probs=45.6
Q ss_pred cccChhcccccc-cc--CCCceeccCChHHHHHHHhccC--CeecCceeEEEEecCCeeEEEEcCCcEEEcCEEEEecC
Q 017808 78 ETISLKSWDKEE-LL--PGGHGLMVRGYLPVINTLAKGL--DIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVP 151 (365)
Q Consensus 78 ~~~S~~~~~~~~-~~--~g~~~~~~gG~~~L~~~L~~~l--~I~l~~~V~~I~~~~~~v~V~~~~g~~~~ad~VI~t~p 151 (365)
.++|+..++... .+ ....+.+.||+++|+++|++.+ +|++|++|++|...+++|.|.+.+......-+|++.+-
T Consensus 292 ~~~s~l~~l~~~~~~~~~~~~~~i~GG~~~l~~~l~~~l~~~i~l~~~V~~I~~~~~gv~v~~~~~~~~~g~~~~~~~~ 370 (376)
T 2e1m_A 292 LHLAFFHSFLGRSDIDPRATYWEIEGGSRMLPETLAKDLRDQIVMGQRMVRLEYYDPGRDGHHGELTGPGGPAVAIQTV 370 (376)
T ss_dssp TTSBHHHHHHHCSCSCTTCCEEEETTCTTHHHHHHHHHGGGTEECSEEEEEEEECCCC-------------CCEEEEEE
T ss_pred chhhHHHHHHHhhhhccCCceEEECCcHHHHHHHHHHhcCCcEEecCeEEEEEECCCceEEEeCCCcCCCCCeeEEEec
Confidence 366665544221 12 2346678999999999999977 59999999999999999887765554456667776654
No 38
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=96.81 E-value=0.0097 Score=57.68 Aligned_cols=42 Identities=29% Similarity=0.293 Sum_probs=36.7
Q ss_pred cCCeecCceeEEEEecCC----eeEEEEcCC---cEEEcCEEEEecChh
Q 017808 112 GLDIRLGHRVTKITRHYI----GVKVTVEGG---KTFVADAVVVAVPLG 153 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~----~v~V~~~~g---~~~~ad~VI~t~p~~ 153 (365)
+++|+++++|++|..+++ +|+|++.++ .+++||.||.|.-..
T Consensus 134 gv~i~~~~~v~~i~~~~~~~~~~v~v~~~~~~~~~~i~a~~vV~AdG~~ 182 (535)
T 3ihg_A 134 GGAIRFGTRLLSFRQHDDDAGAGVTARLAGPDGEYDLRAGYLVGADGNR 182 (535)
T ss_dssp TCEEESSCEEEEEEEECGGGCSEEEEEEEETTEEEEEEEEEEEECCCTT
T ss_pred CCEEEeCCEEEEEEECCCCccccEEEEEEcCCCeEEEEeCEEEECCCCc
Confidence 578999999999999988 888888776 689999999998764
No 39
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=95.70 E-value=0.068 Score=51.38 Aligned_cols=43 Identities=23% Similarity=0.149 Sum_probs=34.9
Q ss_pred cCCeecCceeEEEEecCCe---eEEEEcCCc--EEEcCEEEEecChhh
Q 017808 112 GLDIRLGHRVTKITRHYIG---VKVTVEGGK--TFVADAVVVAVPLGV 154 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~---v~V~~~~g~--~~~ad~VI~t~p~~~ 154 (365)
+++|+++++|++|..++++ |.+.+.+|+ ++.||.||.|.-..-
T Consensus 125 Gv~i~~~~~V~~v~~~~~~v~gv~~~~~dG~~~~i~ad~VI~AdG~~S 172 (512)
T 3e1t_A 125 GVDVRERHEVIDVLFEGERAVGVRYRNTEGVELMAHARFIVDASGNRT 172 (512)
T ss_dssp TCEEESSCEEEEEEEETTEEEEEEEECSSSCEEEEEEEEEEECCCTTC
T ss_pred CCEEEcCCEEEEEEEECCEEEEEEEEeCCCCEEEEEcCEEEECCCcch
Confidence 6789999999999998875 445556784 799999999997643
No 40
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=95.62 E-value=0.018 Score=54.03 Aligned_cols=43 Identities=21% Similarity=0.302 Sum_probs=39.2
Q ss_pred cCCeecCc---eeEEEEecCCeeE-EEEcCCcEEEcCEEEEecChhh
Q 017808 112 GLDIRLGH---RVTKITRHYIGVK-VTVEGGKTFVADAVVVAVPLGV 154 (365)
Q Consensus 112 ~l~I~l~~---~V~~I~~~~~~v~-V~~~~g~~~~ad~VI~t~p~~~ 154 (365)
+++|++++ +|++|..++++|. |++.+|+++.||+||+|+-...
T Consensus 175 Gv~i~~~t~~~~V~~i~~~~~~v~gV~t~~G~~i~Ad~VV~AtG~~s 221 (438)
T 3dje_A 175 GVKFVTGTPQGRVVTLIFENNDVKGAVTADGKIWRAERTFLCAGASA 221 (438)
T ss_dssp TCEEEESTTTTCEEEEEEETTEEEEEEETTTEEEECSEEEECCGGGG
T ss_pred CCEEEeCCcCceEEEEEecCCeEEEEEECCCCEEECCEEEECCCCCh
Confidence 67899999 9999999888888 9999998899999999998764
No 41
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=95.62 E-value=0.16 Score=47.05 Aligned_cols=42 Identities=21% Similarity=0.226 Sum_probs=35.6
Q ss_pred cCCeecCceeEEEEecCCee--EEEEcCCc--EEEcCEEEEecChh
Q 017808 112 GLDIRLGHRVTKITRHYIGV--KVTVEGGK--TFVADAVVVAVPLG 153 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~v--~V~~~~g~--~~~ad~VI~t~p~~ 153 (365)
+++|+++++|++|..+++++ .|.+.+|+ ++.||.||.|.-..
T Consensus 120 gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~A~G~~ 165 (421)
T 3nix_A 120 GVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIIDASGYG 165 (421)
T ss_dssp TCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEECCGGG
T ss_pred CCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEECCCCc
Confidence 67899999999999887774 56778887 69999999998754
No 42
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=95.53 E-value=0.2 Score=49.00 Aligned_cols=42 Identities=31% Similarity=0.308 Sum_probs=34.5
Q ss_pred cCCeecCceeEEEEec-CCeeEEEEc-CC--cEEEcCEEEEecChh
Q 017808 112 GLDIRLGHRVTKITRH-YIGVKVTVE-GG--KTFVADAVVVAVPLG 153 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~-~~~v~V~~~-~g--~~~~ad~VI~t~p~~ 153 (365)
+++|+++++|++|..+ ++.+.|++. +| .++.||.||.|.-..
T Consensus 142 Gv~i~~g~~V~~v~~~~g~~~~V~~~~~G~~~~i~AdlVV~AdG~~ 187 (591)
T 3i3l_A 142 GITVHEETPVTDVDLSDPDRVVLTVRRGGESVTVESDFVIDAGGSG 187 (591)
T ss_dssp TCEEETTCCEEEEECCSTTCEEEEEEETTEEEEEEESEEEECCGGG
T ss_pred CCEEEeCCEEEEEEEcCCCEEEEEEecCCceEEEEcCEEEECCCCc
Confidence 6789999999999976 455778776 67 579999999999654
No 43
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=95.35 E-value=0.017 Score=52.92 Aligned_cols=42 Identities=19% Similarity=0.149 Sum_probs=37.8
Q ss_pred cCCeecCceeEEEEecCCeeEEEEcCCcEEEcCEEEEecChhh
Q 017808 112 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGV 154 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~v~V~~~~g~~~~ad~VI~t~p~~~ 154 (365)
+++|+++++|++|..+++++.|++.+| ++.||+||+|+-...
T Consensus 168 Gv~i~~~~~V~~i~~~~~~~~V~t~~g-~i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 168 QGQVLCNHEALEIRRVDGAWEVRCDAG-SYRAAVLVNAAGAWC 209 (381)
T ss_dssp TCEEESSCCCCEEEEETTEEEEECSSE-EEEESEEEECCGGGH
T ss_pred CCEEEcCCEEEEEEEeCCeEEEEeCCC-EEEcCEEEECCChhH
Confidence 678999999999999988999999888 899999999998754
No 44
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=95.22 E-value=0.027 Score=56.24 Aligned_cols=52 Identities=15% Similarity=0.173 Sum_probs=43.4
Q ss_pred HHHHHHHhc-----cCCeecCceeEEEEecCCeeEEEEcCCcEEEcCEEEEecChhh
Q 017808 103 LPVINTLAK-----GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGV 154 (365)
Q Consensus 103 ~~L~~~L~~-----~l~I~l~~~V~~I~~~~~~v~V~~~~g~~~~ad~VI~t~p~~~ 154 (365)
..+++.|.+ +++|+++++|++|..++++|.|++.+|.++.||+||+|+....
T Consensus 417 ~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~i~Ad~VVlAtG~~s 473 (676)
T 3ps9_A 417 AELTRNVLELAQQQGLQIYYQYQLQNFSRKDDCWLLNFAGDQQATHSVVVLANGHQI 473 (676)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCGGGG
T ss_pred HHHHHHHHHHHHhCCCEEEeCCeeeEEEEeCCeEEEEECCCCEEECCEEEECCCcch
Confidence 444454432 6789999999999999999999998888899999999998764
No 45
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=94.93 E-value=0.049 Score=50.98 Aligned_cols=54 Identities=28% Similarity=0.355 Sum_probs=44.1
Q ss_pred cCChHHHHHHHhc-----cCCeecCceeEEEEecCCeeEEEEcCCcEEEcCEEEEecChh
Q 017808 99 VRGYLPVINTLAK-----GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLG 153 (365)
Q Consensus 99 ~gG~~~L~~~L~~-----~l~I~l~~~V~~I~~~~~~v~V~~~~g~~~~ad~VI~t~p~~ 153 (365)
......+.+.|.+ +++|+++++|++|..+++++.|++.+| ++.||+||+|+-..
T Consensus 128 ~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~~~V~~~~g-~i~ad~VIlAtG~~ 186 (417)
T 3v76_A 128 DHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASGFRVTTSAG-TVDAASLVVASGGK 186 (417)
T ss_dssp SSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTE-EEEESEEEECCCCS
T ss_pred CCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCc-EEEeeEEEECCCCc
Confidence 3444566666644 678999999999999888999999888 89999999998754
No 46
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=94.89 E-value=0.034 Score=55.62 Aligned_cols=52 Identities=13% Similarity=0.174 Sum_probs=42.4
Q ss_pred HHHHHHHhc-----cCCeecCceeEEEEecCCeeEEEEcCCc-EEEcCEEEEecChhh
Q 017808 103 LPVINTLAK-----GLDIRLGHRVTKITRHYIGVKVTVEGGK-TFVADAVVVAVPLGV 154 (365)
Q Consensus 103 ~~L~~~L~~-----~l~I~l~~~V~~I~~~~~~v~V~~~~g~-~~~ad~VI~t~p~~~ 154 (365)
..++++|.+ +++|+++++|++|..++++|.|++.+|+ ++.||+||+|+....
T Consensus 412 ~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~~i~Ad~VVlAtG~~s 469 (689)
T 3pvc_A 412 SDLTHALMMLAQQNGMTCHYQHELQRLKRIDSQWQLTFGQSQAAKHHATVILATGHRL 469 (689)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEECSSSEEEEEC-CCCCEEESEEEECCGGGT
T ss_pred HHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCCeEEEEeCCCcEEEECCEEEECCCcch
Confidence 445555543 6789999999999999999999999887 899999999998763
No 47
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=94.85 E-value=0.041 Score=49.90 Aligned_cols=43 Identities=14% Similarity=0.159 Sum_probs=37.3
Q ss_pred cCCeecCceeEEEEecCCe-eEEEEcCC--cEEEcCEEEEecChhh
Q 017808 112 GLDIRLGHRVTKITRHYIG-VKVTVEGG--KTFVADAVVVAVPLGV 154 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~-v~V~~~~g--~~~~ad~VI~t~p~~~ 154 (365)
+++|+++++|++|..++++ +.|++.+| .++.||+||+|+-...
T Consensus 164 Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~a~~VV~A~G~~s 209 (369)
T 3dme_A 164 GAQLVFHTPLIAGRVRPEGGFELDFGGAEPMTLSCRVLINAAGLHA 209 (369)
T ss_dssp TCEEECSCCEEEEEECTTSSEEEEECTTSCEEEEEEEEEECCGGGH
T ss_pred CCEEECCCEEEEEEEcCCceEEEEECCCceeEEEeCEEEECCCcch
Confidence 5789999999999998776 88999888 4799999999998753
No 48
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=94.47 E-value=0.053 Score=50.28 Aligned_cols=41 Identities=24% Similarity=0.291 Sum_probs=37.9
Q ss_pred CCeecCceeEEEEecCCeeEEEEcCCcEEEcCEEEEecChh
Q 017808 113 LDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLG 153 (365)
Q Consensus 113 l~I~l~~~V~~I~~~~~~v~V~~~~g~~~~ad~VI~t~p~~ 153 (365)
++|+++++|++|..++++|+|++.+|+++.||.||.|.-..
T Consensus 140 ~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~a~~vV~AdG~~ 180 (407)
T 3rp8_A 140 DSVQFGKRVTRCEEDADGVTVWFTDGSSASGDLLIAADGSH 180 (407)
T ss_dssp GGEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCCTT
T ss_pred CEEEECCEEEEEEecCCcEEEEEcCCCEEeeCEEEECCCcC
Confidence 68999999999999999999999999999999999998754
No 49
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=94.33 E-value=0.06 Score=49.08 Aligned_cols=42 Identities=24% Similarity=0.272 Sum_probs=37.3
Q ss_pred cCCeecCceeEEEEecCCeeEEEEcCCcEEEcCEEEEecChhh
Q 017808 112 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGV 154 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~v~V~~~~g~~~~ad~VI~t~p~~~ 154 (365)
+++|+++++|++|..++++|.|++.+| ++.||+||+|+....
T Consensus 163 G~~i~~~~~V~~i~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s 204 (372)
T 2uzz_A 163 GCAQLFNCPVTAIRHDDDGVTIETADG-EYQAKKAIVCAGTWV 204 (372)
T ss_dssp TCEEECSCCEEEEEECSSSEEEEESSC-EEEEEEEEECCGGGG
T ss_pred CCEEEcCCEEEEEEEcCCEEEEEECCC-eEEcCEEEEcCCccH
Confidence 578999999999999888899999888 599999999998764
No 50
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=94.18 E-value=0.085 Score=48.56 Aligned_cols=49 Identities=27% Similarity=0.393 Sum_probs=40.5
Q ss_pred HHHHHHhc-cCCeecCceeEEEEecCCeeEEEEcCCcEEEcCEEEEecCh
Q 017808 104 PVINTLAK-GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 152 (365)
Q Consensus 104 ~L~~~L~~-~l~I~l~~~V~~I~~~~~~v~V~~~~g~~~~ad~VI~t~p~ 152 (365)
.+.+.|.+ +++|+++++|++|..+++++.|++.+|+++.||.||+++..
T Consensus 192 ~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vv~a~G~ 241 (384)
T 2v3a_A 192 AVQAGLEGLGVRFHLGPVLASLKKAGEGLEAHLSDGEVIPCDLVVSAVGL 241 (384)
T ss_dssp HHHHHHHTTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECSCE
T ss_pred HHHHHHHHcCCEEEeCCEEEEEEecCCEEEEEECCCCEEECCEEEECcCC
Confidence 34444433 67899999999999888888899999989999999999874
No 51
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=94.12 E-value=0.076 Score=48.63 Aligned_cols=42 Identities=19% Similarity=0.087 Sum_probs=37.0
Q ss_pred cCCeecCceeEEEEecCCeeE-EEEcCCcEEEcCEEEEecChhh
Q 017808 112 GLDIRLGHRVTKITRHYIGVK-VTVEGGKTFVADAVVVAVPLGV 154 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~v~-V~~~~g~~~~ad~VI~t~p~~~ 154 (365)
+++|+++++|++|..++++|. |++.+| ++.||+||+|+-...
T Consensus 163 Gv~i~~~~~v~~i~~~~~~v~gv~~~~g-~i~a~~VV~A~G~~s 205 (382)
T 1y56_B 163 GAKLLEYTEVKGFLIENNEIKGVKTNKG-IIKTGIVVNATNAWA 205 (382)
T ss_dssp TCEEECSCCEEEEEESSSBEEEEEETTE-EEECSEEEECCGGGH
T ss_pred CCEEECCceEEEEEEECCEEEEEEECCc-EEECCEEEECcchhH
Confidence 578999999999999888887 888888 899999999998653
No 52
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=94.09 E-value=0.082 Score=50.39 Aligned_cols=41 Identities=24% Similarity=0.326 Sum_probs=37.7
Q ss_pred cCCeecCceeEEEEecCCeeEEEEcCCcEEEcCEEEEecCh
Q 017808 112 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 152 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~v~V~~~~g~~~~ad~VI~t~p~ 152 (365)
+++|+++++|++|..+++++.|++.+|+++.||.||+++..
T Consensus 246 Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vi~A~G~ 286 (484)
T 3o0h_A 246 GISIIYEATVSQVQSTENCYNVVLTNGQTICADRVMLATGR 286 (484)
T ss_dssp TCEEESSCCEEEEEECSSSEEEEETTSCEEEESEEEECCCE
T ss_pred CCEEEeCCEEEEEEeeCCEEEEEECCCcEEEcCEEEEeeCC
Confidence 67899999999999988889999999989999999999975
No 53
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=94.08 E-value=0.073 Score=49.09 Aligned_cols=50 Identities=30% Similarity=0.377 Sum_probs=39.7
Q ss_pred HHHHHHHhc-cCCeecCceeEEEEecCCeeEEEEcCCcEEEcCEEEEecChh
Q 017808 103 LPVINTLAK-GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLG 153 (365)
Q Consensus 103 ~~L~~~L~~-~l~I~l~~~V~~I~~~~~~v~V~~~~g~~~~ad~VI~t~p~~ 153 (365)
..|.+.+.+ +++|+++++|++|..++++|.|++.+| ++.||.||+|+-..
T Consensus 157 ~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~v~v~t~~g-~i~a~~VV~A~G~~ 207 (397)
T 2oln_A 157 AALFTLAQAAGATLRAGETVTELVPDADGVSVTTDRG-TYRAGKVVLACGPY 207 (397)
T ss_dssp HHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEESSC-EEEEEEEEECCGGG
T ss_pred HHHHHHHHHcCCEEECCCEEEEEEEcCCeEEEEECCC-EEEcCEEEEcCCcC
Confidence 334444333 678999999999999888899988776 79999999999754
No 54
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=93.97 E-value=0.068 Score=43.29 Aligned_cols=39 Identities=21% Similarity=0.221 Sum_probs=34.9
Q ss_pred cCCeecCceeEEEEecCCeeEEEEcCCcEEEcCEEEEecCh
Q 017808 112 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 152 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~v~V~~~~g~~~~ad~VI~t~p~ 152 (365)
+++++++ +|++|..+++++.|++.+| ++.||.||+|+..
T Consensus 70 gv~v~~~-~v~~i~~~~~~~~v~~~~g-~i~ad~vI~A~G~ 108 (180)
T 2ywl_A 70 GAEVRPG-VVKGVRDMGGVFEVETEEG-VEKAERLLLCTHK 108 (180)
T ss_dssp TCEEEEC-CCCEEEECSSSEEEECSSC-EEEEEEEEECCTT
T ss_pred CCEEEeC-EEEEEEEcCCEEEEEECCC-EEEECEEEECCCC
Confidence 5789999 9999998888888999888 8999999999874
No 55
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=93.97 E-value=0.061 Score=49.68 Aligned_cols=49 Identities=16% Similarity=0.300 Sum_probs=40.6
Q ss_pred HHHHHhc--cCCeecCceeEEEEecCCee--EEEEcCCcEEEcCEEEEecChh
Q 017808 105 VINTLAK--GLDIRLGHRVTKITRHYIGV--KVTVEGGKTFVADAVVVAVPLG 153 (365)
Q Consensus 105 L~~~L~~--~l~I~l~~~V~~I~~~~~~v--~V~~~~g~~~~ad~VI~t~p~~ 153 (365)
|.+.+.+ +++|+++++|++|..++++| .|++.+|+++.||.||.|.-..
T Consensus 113 L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~~~ad~vV~AdG~~ 165 (399)
T 2x3n_A 113 VLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRVLRPRVVVGADGIA 165 (399)
T ss_dssp HHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECCCTT
T ss_pred HHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECCCCEEECCEEEECCCCC
Confidence 3444443 46899999999999998889 8999999899999999998754
No 56
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=93.88 E-value=0.057 Score=49.41 Aligned_cols=41 Identities=24% Similarity=0.208 Sum_probs=36.6
Q ss_pred cCCeecCceeEEEEecCCeeEEEEcCCcEEEcCEEEEecChh
Q 017808 112 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLG 153 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~v~V~~~~g~~~~ad~VI~t~p~~ 153 (365)
+++|+++++|++|..++++|.|++.+| ++.||.||+|+...
T Consensus 178 g~~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~ 218 (382)
T 1ryi_A 178 GAEIFEHTPVLHVERDGEALFIKTPSG-DVWANHVVVASGVW 218 (382)
T ss_dssp TCEEETTCCCCEEECSSSSEEEEETTE-EEEEEEEEECCGGG
T ss_pred CCEEEcCCcEEEEEEECCEEEEEcCCc-eEEcCEEEECCChh
Confidence 578999999999999888888888877 89999999999874
No 57
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=93.85 E-value=0.099 Score=50.04 Aligned_cols=42 Identities=24% Similarity=0.332 Sum_probs=37.1
Q ss_pred cCCeecCceeEEEEecCCeeEEEEcCCcEEEcCEEEEecChh
Q 017808 112 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLG 153 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~v~V~~~~g~~~~ad~VI~t~p~~ 153 (365)
+++|+++++|++|..+++++.|++.+|+++.||.||+++...
T Consensus 237 GV~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~ 278 (499)
T 1xdi_A 237 GVRLFKNARAASVTRTGAGVLVTMTDGRTVEGSHALMTIGSV 278 (499)
T ss_dssp TCEEETTCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEE
T ss_pred CCEEEeCCEEEEEEEeCCEEEEEECCCcEEEcCEEEECCCCC
Confidence 678999999999998877788888899899999999998643
No 58
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=93.83 E-value=0.091 Score=49.55 Aligned_cols=51 Identities=25% Similarity=0.302 Sum_probs=40.9
Q ss_pred hHHHHHHHhc-----cCCeecCceeEEEEecCCe-eEEEEcCCcEEEcCEEEEecCh
Q 017808 102 YLPVINTLAK-----GLDIRLGHRVTKITRHYIG-VKVTVEGGKTFVADAVVVAVPL 152 (365)
Q Consensus 102 ~~~L~~~L~~-----~l~I~l~~~V~~I~~~~~~-v~V~~~~g~~~~ad~VI~t~p~ 152 (365)
...+.+.|.+ +++|+++++|++|..++++ +.|++.+|+++.||.||+|+-.
T Consensus 133 ~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~~G~~i~Ad~VVlAtGg 189 (447)
T 2i0z_A 133 AQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQTGEVLETNHVVIAVGG 189 (447)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTCCEEECSCEEECCCC
T ss_pred HHHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEECCCCEEECCEEEECCCC
Confidence 3555555543 5789999999999987777 6788889977999999999864
No 59
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=93.78 E-value=0.12 Score=47.67 Aligned_cols=52 Identities=13% Similarity=0.068 Sum_probs=43.7
Q ss_pred hHHHHHHHhc---cCCeecCceeEEEEecCCeeEEEEcCCcEEEcCEEEEecChh
Q 017808 102 YLPVINTLAK---GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLG 153 (365)
Q Consensus 102 ~~~L~~~L~~---~l~I~l~~~V~~I~~~~~~v~V~~~~g~~~~ad~VI~t~p~~ 153 (365)
...|.+.|.+ +++|+++++|++|..++++|.|++.+|+++.||.||.|.-..
T Consensus 98 ~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~ 152 (397)
T 2vou_A 98 YDSIYGGLYELFGPERYHTSKCLVGLSQDSETVQMRFSDGTKAEANWVIGADGGA 152 (397)
T ss_dssp HHHHHHHHHHHHCSTTEETTCCEEEEEECSSCEEEEETTSCEEEESEEEECCCTT
T ss_pred HHHHHHHHHHhCCCcEEEcCCEEEEEEecCCEEEEEECCCCEEECCEEEECCCcc
Confidence 3455555544 678999999999999999999999999999999999998754
No 60
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=93.73 E-value=0.085 Score=48.35 Aligned_cols=42 Identities=21% Similarity=0.288 Sum_probs=36.9
Q ss_pred cCCeecCceeEEEEecCCeeEEEEcCCcEEEcCEEEEecChhh
Q 017808 112 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGV 154 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~v~V~~~~g~~~~ad~VI~t~p~~~ 154 (365)
+++|+++++|++|..+++++.|++.+| ++.||.||+|+....
T Consensus 164 Gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~~ 205 (389)
T 2gf3_A 164 GAKVLTHTRVEDFDISPDSVKIETANG-SYTADKLIVSMGAWN 205 (389)
T ss_dssp TCEEECSCCEEEEEECSSCEEEEETTE-EEEEEEEEECCGGGH
T ss_pred CCEEEcCcEEEEEEecCCeEEEEeCCC-EEEeCEEEEecCccH
Confidence 578999999999999888888988777 799999999998753
No 61
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=93.72 E-value=0.11 Score=49.39 Aligned_cols=41 Identities=20% Similarity=0.298 Sum_probs=37.0
Q ss_pred cCCeecCceeEEEEecCCeeEEEEcCCcEEEcCEEEEecCh
Q 017808 112 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 152 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~v~V~~~~g~~~~ad~VI~t~p~ 152 (365)
+++|+++++|++|..+++++.|++.+|+++.||.||+++..
T Consensus 216 GV~i~~~~~v~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~ 256 (472)
T 3iwa_A 216 DVVVHTGEKVVRLEGENGKVARVITDKRTLDADLVILAAGV 256 (472)
T ss_dssp TCEEECSCCEEEEEESSSBEEEEEESSCEEECSEEEECSCE
T ss_pred CCEEEeCCEEEEEEccCCeEEEEEeCCCEEEcCEEEECCCC
Confidence 67899999999999877888888889999999999999875
No 62
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=93.57 E-value=0.12 Score=47.88 Aligned_cols=52 Identities=13% Similarity=-0.001 Sum_probs=43.1
Q ss_pred HHHHHHHhcc---CCeecCceeEEEEecCCeeEEEEcCCcEEEcCEEEEecChhh
Q 017808 103 LPVINTLAKG---LDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGV 154 (365)
Q Consensus 103 ~~L~~~L~~~---l~I~l~~~V~~I~~~~~~v~V~~~~g~~~~ad~VI~t~p~~~ 154 (365)
..|.+.|.+. .+|+++++|++|..++++|.|++.+|++++||.||.|.-..-
T Consensus 128 ~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S 182 (398)
T 2xdo_A 128 NDLRAILLNSLENDTVIWDRKLVMLEPGKKKWTLTFENKPSETADLVILANGGMS 182 (398)
T ss_dssp HHHHHHHHHTSCTTSEEESCCEEEEEECSSSEEEEETTSCCEEESEEEECSCTTC
T ss_pred HHHHHHHHhhcCCCEEEECCEEEEEEECCCEEEEEECCCcEEecCEEEECCCcch
Confidence 4455555554 479999999999998888999999998899999999987654
No 63
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=93.53 E-value=0.14 Score=47.74 Aligned_cols=41 Identities=29% Similarity=0.462 Sum_probs=36.5
Q ss_pred cCCeecCceeEEEEecCCee-EEEEcCCcEEEcCEEEEecCh
Q 017808 112 GLDIRLGHRVTKITRHYIGV-KVTVEGGKTFVADAVVVAVPL 152 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~v-~V~~~~g~~~~ad~VI~t~p~ 152 (365)
+++|+++++|++|..+++++ .|++.+|+++.||.||+++..
T Consensus 208 GV~i~~~~~v~~i~~~~~~v~~v~l~dG~~i~aD~Vv~a~G~ 249 (415)
T 3lxd_A 208 GVDLRTGAAMDCIEGDGTKVTGVRMQDGSVIPADIVIVGIGI 249 (415)
T ss_dssp TCEEEETCCEEEEEESSSBEEEEEESSSCEEECSEEEECSCC
T ss_pred CCEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECCCC
Confidence 67899999999999877776 588999999999999999874
No 64
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=93.34 E-value=0.15 Score=47.33 Aligned_cols=41 Identities=34% Similarity=0.475 Sum_probs=36.3
Q ss_pred cCCeecCceeEEEEecCCeeE-EEEcCCcEEEcCEEEEecCh
Q 017808 112 GLDIRLGHRVTKITRHYIGVK-VTVEGGKTFVADAVVVAVPL 152 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~v~-V~~~~g~~~~ad~VI~t~p~ 152 (365)
+++|+++++|++|..+++++. |++.+|+++.||.||+++..
T Consensus 198 GV~i~~~~~v~~i~~~~~~v~~V~~~dG~~i~aD~Vv~a~G~ 239 (404)
T 3fg2_P 198 GIRMHYGVRATEIAAEGDRVTGVVLSDGNTLPCDLVVVGVGV 239 (404)
T ss_dssp TCEEECSCCEEEEEEETTEEEEEEETTSCEEECSEEEECCCE
T ss_pred CcEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECcCC
Confidence 678999999999998777764 88999999999999999875
No 65
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=93.28 E-value=0.13 Score=49.90 Aligned_cols=51 Identities=25% Similarity=0.376 Sum_probs=41.1
Q ss_pred HHHHHHHhc-----cCCeecCceeEEEEecCCeeE-EEEcCCcEEEcCEEEEecChh
Q 017808 103 LPVINTLAK-----GLDIRLGHRVTKITRHYIGVK-VTVEGGKTFVADAVVVAVPLG 153 (365)
Q Consensus 103 ~~L~~~L~~-----~l~I~l~~~V~~I~~~~~~v~-V~~~~g~~~~ad~VI~t~p~~ 153 (365)
..+.+.|.+ +++|+++++|++|..+++++. |++.+|+++.||.||+|+-..
T Consensus 220 ~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v~gV~l~~G~~i~Ad~VVlA~G~~ 276 (549)
T 3nlc_A 220 VTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEIKSRHVVLAVGHS 276 (549)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEEESSSBEEEEEETTSCEEECSCEEECCCTT
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCC
Confidence 445555533 578999999999998887765 889999899999999998754
No 66
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=93.27 E-value=0.14 Score=48.23 Aligned_cols=42 Identities=45% Similarity=0.634 Sum_probs=37.2
Q ss_pred cCCeecCceeEEEEecCCeeEEEEcCCcEEEcCEEEEecChh
Q 017808 112 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLG 153 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~v~V~~~~g~~~~ad~VI~t~p~~ 153 (365)
+++|+++++|++|..+++++.|++.+|+++.||.||+++...
T Consensus 222 Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~~D~vv~A~G~~ 263 (455)
T 2yqu_A 222 GLTIRTGVRVTAVVPEAKGARVELEGGEVLEADRVLVAVGRR 263 (455)
T ss_dssp TCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEE
T ss_pred CCEEEECCEEEEEEEeCCEEEEEECCCeEEEcCEEEECcCCC
Confidence 678999999999998888888888888899999999998753
No 67
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=93.10 E-value=0.16 Score=48.53 Aligned_cols=47 Identities=17% Similarity=0.294 Sum_probs=39.2
Q ss_pred HHHHhc-cCCeecCceeEEEEecCCeeEEEEcCCcEEEcCEEEEecCh
Q 017808 106 INTLAK-GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 152 (365)
Q Consensus 106 ~~~L~~-~l~I~l~~~V~~I~~~~~~v~V~~~~g~~~~ad~VI~t~p~ 152 (365)
.+.|.+ +++|++++.|++|..+++++.|++.+|+++.||.||+++..
T Consensus 233 ~~~l~~~GV~v~~~~~V~~i~~~~~~~~v~l~dG~~i~aD~Vv~a~G~ 280 (493)
T 1m6i_A 233 MEKVRREGVKVMPNAIVQSVGVSSGKLLIKLKDGRKVETDHIVAAVGL 280 (493)
T ss_dssp HHHHHTTTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECCCE
T ss_pred HHHHHhcCCEEEeCCEEEEEEecCCeEEEEECCCCEEECCEEEECCCC
Confidence 334433 67899999999998877778888999999999999999875
No 68
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=92.90 E-value=0.16 Score=47.13 Aligned_cols=41 Identities=27% Similarity=0.443 Sum_probs=36.0
Q ss_pred cCCeecCceeEEEEecCCeeEEEEcCCcEEEcCEEEEecCh
Q 017808 112 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 152 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~v~V~~~~g~~~~ad~VI~t~p~ 152 (365)
+++|+++++|++|..++....|++.+|+++.||.||+++..
T Consensus 199 GV~i~~~~~v~~i~~~~~~~~v~~~dg~~i~aD~Vv~a~G~ 239 (410)
T 3ef6_A 199 GVQVELGTGVVGFSGEGQLEQVMASDGRSFVADSALICVGA 239 (410)
T ss_dssp TCEEECSCCEEEEECSSSCCEEEETTSCEEECSEEEECSCE
T ss_pred CCEEEeCCEEEEEeccCcEEEEEECCCCEEEcCEEEEeeCC
Confidence 67899999999998866555788999999999999999875
No 69
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=92.66 E-value=0.17 Score=46.97 Aligned_cols=50 Identities=18% Similarity=0.262 Sum_probs=39.1
Q ss_pred hHHHHHHHhc-----cCCeecCceeEEEEec----CCeeEEEEcCCcEEEcCEEEEecCh
Q 017808 102 YLPVINTLAK-----GLDIRLGHRVTKITRH----YIGVKVTVEGGKTFVADAVVVAVPL 152 (365)
Q Consensus 102 ~~~L~~~L~~-----~l~I~l~~~V~~I~~~----~~~v~V~~~~g~~~~ad~VI~t~p~ 152 (365)
...+.+.|.+ +++|+++++|++|..+ ++++.|++.+| ++.||+||+|+-.
T Consensus 108 ~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~~~g-~i~ad~VVlAtG~ 166 (401)
T 2gqf_A 108 AEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRFVLQVNST-QWQCKNLIVATGG 166 (401)
T ss_dssp THHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCEEEEETTE-EEEESEEEECCCC
T ss_pred HHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeEEEEECCC-EEECCEEEECCCC
Confidence 3445555533 6789999999999977 56788988877 7999999999854
No 70
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=92.61 E-value=0.21 Score=47.32 Aligned_cols=41 Identities=24% Similarity=0.326 Sum_probs=36.6
Q ss_pred cCCeecCceeEEEEecCCeeEEEEcCCc-EEEcCEEEEecCh
Q 017808 112 GLDIRLGHRVTKITRHYIGVKVTVEGGK-TFVADAVVVAVPL 152 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~v~V~~~~g~-~~~ad~VI~t~p~ 152 (365)
+++|+++++|++|..+++++.|++.+|+ ++.||.||+++..
T Consensus 221 gv~i~~~~~v~~i~~~~~~~~v~~~~G~~~i~~D~vv~a~G~ 262 (463)
T 2r9z_A 221 GIETHLEFAVAALERDAQGTTLVAQDGTRLEGFDSVIWAVGR 262 (463)
T ss_dssp TCEEESSCCEEEEEEETTEEEEEETTCCEEEEESEEEECSCE
T ss_pred CCEEEeCCEEEEEEEeCCeEEEEEeCCcEEEEcCEEEECCCC
Confidence 6789999999999987777889999998 8999999999864
No 71
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=92.58 E-value=0.15 Score=49.11 Aligned_cols=48 Identities=25% Similarity=0.411 Sum_probs=38.1
Q ss_pred HHHHHhc-cCCeecCceeEEEEecCCe----eEEEEcCCc-EEEcCEEEEecCh
Q 017808 105 VINTLAK-GLDIRLGHRVTKITRHYIG----VKVTVEGGK-TFVADAVVVAVPL 152 (365)
Q Consensus 105 L~~~L~~-~l~I~l~~~V~~I~~~~~~----v~V~~~~g~-~~~ad~VI~t~p~ 152 (365)
+.+.|.+ +++|+++++|++|..++++ +.|++.+|+ ++.||.||+++..
T Consensus 261 l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~ 314 (523)
T 1mo9_A 261 VLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGE 314 (523)
T ss_dssp HHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCC
T ss_pred HHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCC
Confidence 3344433 6789999999999986665 778888887 8999999999864
No 72
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=92.35 E-value=0.2 Score=47.15 Aligned_cols=40 Identities=15% Similarity=0.194 Sum_probs=35.4
Q ss_pred cCCeecCceeEEEEecCCeeEEEEcCCcEEEcCEEEEecCh
Q 017808 112 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 152 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~v~V~~~~g~~~~ad~VI~t~p~ 152 (365)
+++|+++++|++|...++++.|++.+| ++.||.||+++..
T Consensus 203 GV~i~~~~~v~~i~~~~~~v~v~~~~g-~i~aD~Vv~A~G~ 242 (452)
T 3oc4_A 203 AVIFHFEETVLGIEETANGIVLETSEQ-EISCDSGIFALNL 242 (452)
T ss_dssp TEEEEETCCEEEEEECSSCEEEEESSC-EEEESEEEECSCC
T ss_pred CCEEEeCCEEEEEEccCCeEEEEECCC-EEEeCEEEECcCC
Confidence 568999999999998888888888777 8999999999875
No 73
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=92.30 E-value=2.4 Score=38.25 Aligned_cols=37 Identities=22% Similarity=0.391 Sum_probs=29.7
Q ss_pred CCEEEeccccCC---CCcchhHHHHHHHHHHHHHHHHHHH
Q 017808 301 DNLFFAGEATSM---SYPGSVHGAFSTGLMAAEDCRMRVL 337 (365)
Q Consensus 301 ~~l~~aG~~~~~---~~~g~v~gA~~SG~~aA~~i~~~l~ 337 (365)
+|++++||+.+. ..+.+++-|+.+|..+|+.|.+.+.
T Consensus 277 ~~v~lvGDAA~~~~P~~G~Gi~~A~~~g~~~A~~i~~~l~ 316 (397)
T 3oz2_A 277 PGLMLVGDAARLIDPITGGGIANAIVSGMYAAQVTKEAIE 316 (397)
T ss_dssp TTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred eeEEEcccccccCCCCcchhHHHHHHHHHHHHHHHHHHHH
Confidence 689999999663 3345899999999999998876553
No 74
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=92.21 E-value=0.24 Score=46.70 Aligned_cols=41 Identities=15% Similarity=0.291 Sum_probs=35.7
Q ss_pred cCCeecCceeEEEEecCCe-eEEEEcCCcEEEcCEEEEecCh
Q 017808 112 GLDIRLGHRVTKITRHYIG-VKVTVEGGKTFVADAVVVAVPL 152 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~-v~V~~~~g~~~~ad~VI~t~p~ 152 (365)
+++|+++++|++|..++++ +.|++.+|+++.||.||+++..
T Consensus 222 Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~i~~D~vv~a~G~ 263 (450)
T 1ges_A 222 GPQLHTNAIPKAVVKNTDGSLTLELEDGRSETVDCLIWAIGR 263 (450)
T ss_dssp SCEEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCE
T ss_pred CCEEEeCCEEEEEEEeCCcEEEEEECCCcEEEcCEEEECCCC
Confidence 6789999999999987654 7888889989999999999864
No 75
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=92.05 E-value=0.29 Score=44.88 Aligned_cols=51 Identities=22% Similarity=0.221 Sum_probs=41.2
Q ss_pred HHHHHHHhccC--CeecCceeEEEEecCC-eeEEEEcCCcEEEcCEEEEecChh
Q 017808 103 LPVINTLAKGL--DIRLGHRVTKITRHYI-GVKVTVEGGKTFVADAVVVAVPLG 153 (365)
Q Consensus 103 ~~L~~~L~~~l--~I~l~~~V~~I~~~~~-~v~V~~~~g~~~~ad~VI~t~p~~ 153 (365)
..|-+.|.+.+ .|+++++|++++..++ +|+|++.||++++||.||-|=-..
T Consensus 112 ~~L~~~L~~~~~~~v~~~~~v~~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~ 165 (412)
T 4hb9_A 112 TELKEILNKGLANTIQWNKTFVRYEHIENGGIKIFFADGSHENVDVLVGADGSN 165 (412)
T ss_dssp HHHHHHHHTTCTTTEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECCCTT
T ss_pred HHHHHHHHhhccceEEEEEEEEeeeEcCCCeEEEEECCCCEEEeeEEEECCCCC
Confidence 45666677765 5999999999987655 589999999999999999886543
No 76
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=92.02 E-value=0.26 Score=47.10 Aligned_cols=41 Identities=32% Similarity=0.442 Sum_probs=35.4
Q ss_pred cCCeecCceeEEEEecCCe-eEEEEcCCcEEEcCEEEEecCh
Q 017808 112 GLDIRLGHRVTKITRHYIG-VKVTVEGGKTFVADAVVVAVPL 152 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~-v~V~~~~g~~~~ad~VI~t~p~ 152 (365)
+++|+++++|++|..++++ +.|++.+|+++.||.||+++..
T Consensus 249 GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~ 290 (495)
T 2wpf_A 249 GIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGR 290 (495)
T ss_dssp TCEEEESCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCE
T ss_pred CCEEEeCCEEEEEEEcCCceEEEEECCCcEEEcCEEEECCCC
Confidence 6789999999999987654 7788889989999999999864
No 77
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=91.95 E-value=0.26 Score=46.86 Aligned_cols=41 Identities=10% Similarity=0.242 Sum_probs=35.0
Q ss_pred cCCeecCceeEEEEecCCe--eEEEEcCC-cEEEcCEEEEecCh
Q 017808 112 GLDIRLGHRVTKITRHYIG--VKVTVEGG-KTFVADAVVVAVPL 152 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~--v~V~~~~g-~~~~ad~VI~t~p~ 152 (365)
+++|+++++|++|...+++ +.|++.+| +++.||.||+++..
T Consensus 240 Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~ 283 (479)
T 2hqm_A 240 GINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGR 283 (479)
T ss_dssp TCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCE
T ss_pred CeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCC
Confidence 6789999999999986655 77888899 78999999999874
No 78
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=91.89 E-value=0.23 Score=47.33 Aligned_cols=41 Identities=27% Similarity=0.388 Sum_probs=35.5
Q ss_pred cCCeecCceeEEEEecCCe-eEEEEcCCcEEEcCEEEEecCh
Q 017808 112 GLDIRLGHRVTKITRHYIG-VKVTVEGGKTFVADAVVVAVPL 152 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~-v~V~~~~g~~~~ad~VI~t~p~ 152 (365)
+++|+++++|++|..++++ +.|++.+|+++.||.||+++..
T Consensus 245 GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~ 286 (490)
T 1fec_A 245 GINVRTHENPAKVTKNADGTRHVVFESGAEADYDVVMLAIGR 286 (490)
T ss_dssp TEEEEETCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCE
T ss_pred CCEEEeCCEEEEEEEcCCCEEEEEECCCcEEEcCEEEEccCC
Confidence 5689999999999987654 7888889988999999999874
No 79
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=91.64 E-value=0.25 Score=44.37 Aligned_cols=41 Identities=22% Similarity=0.267 Sum_probs=37.0
Q ss_pred cCCeecCceeEEEEecCCeeE-EEEcCCcEEEcCEEEEecChh
Q 017808 112 GLDIRLGHRVTKITRHYIGVK-VTVEGGKTFVADAVVVAVPLG 153 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~v~-V~~~~g~~~~ad~VI~t~p~~ 153 (365)
+++++++++|++|...++++. |++.+| ++.||+||+|+-..
T Consensus 90 ~~~~~~~~~v~~i~~~~~~~~~v~~~~g-~~~~d~vV~AtG~~ 131 (357)
T 4a9w_A 90 ALPVLRPIRVQRVSHFGERLRVVARDGR-QWLARAVISATGTW 131 (357)
T ss_dssp TCCEECSCCEEEEEEETTEEEEEETTSC-EEEEEEEEECCCSG
T ss_pred CCEEEcCCEEEEEEECCCcEEEEEeCCC-EEEeCEEEECCCCC
Confidence 568999999999999999999 998888 89999999999853
No 80
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=91.35 E-value=0.27 Score=45.21 Aligned_cols=41 Identities=27% Similarity=0.193 Sum_probs=35.2
Q ss_pred cCCeecCceeEEEEecCCe-eEEEEcCCcEEEcCEEEEecChh
Q 017808 112 GLDIRLGHRVTKITRHYIG-VKVTVEGGKTFVADAVVVAVPLG 153 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~-v~V~~~~g~~~~ad~VI~t~p~~ 153 (365)
+++|+++++|++|..++++ +.|++.+| ++.||.||+|+...
T Consensus 188 g~~i~~~~~v~~i~~~~~~~~~v~~~~g-~~~a~~vV~a~G~~ 229 (405)
T 2gag_B 188 GVDIIQNCEVTGFIKDGEKVTGVKTTRG-TIHAGKVALAGAGH 229 (405)
T ss_dssp TCEEECSCCEEEEEESSSBEEEEEETTC-CEEEEEEEECCGGG
T ss_pred CCEEEcCCeEEEEEEeCCEEEEEEeCCc-eEECCEEEECCchh
Confidence 5789999999999988776 45888888 79999999999864
No 81
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=91.34 E-value=0.33 Score=43.28 Aligned_cols=42 Identities=31% Similarity=0.409 Sum_probs=36.9
Q ss_pred cCCeecCceeEEEEecCCeeEEEEcCCcEEEcCEEEEecChh
Q 017808 112 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLG 153 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~v~V~~~~g~~~~ad~VI~t~p~~ 153 (365)
+++++++++|++|...++.+.|++.+|+++.+|+||+|+-..
T Consensus 79 ~~~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~~lv~AtG~~ 120 (335)
T 2zbw_A 79 NPVYSLGERAETLEREGDLFKVTTSQGNAYTAKAVIIAAGVG 120 (335)
T ss_dssp CCEEEESCCEEEEEEETTEEEEEETTSCEEEEEEEEECCTTS
T ss_pred CCEEEeCCEEEEEEECCCEEEEEECCCCEEEeCEEEECCCCC
Confidence 457889999999998877888999888889999999999763
No 82
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=91.10 E-value=0.4 Score=44.83 Aligned_cols=41 Identities=34% Similarity=0.481 Sum_probs=35.3
Q ss_pred cCCeecCceeEEEEe--cCCee-EEEEcCCcEEEcCEEEEecCh
Q 017808 112 GLDIRLGHRVTKITR--HYIGV-KVTVEGGKTFVADAVVVAVPL 152 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~--~~~~v-~V~~~~g~~~~ad~VI~t~p~ 152 (365)
+++|+++++|++|.. .++++ .|++.+|+++.||.||+++..
T Consensus 205 GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G~ 248 (431)
T 1q1r_A 205 GVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIGL 248 (431)
T ss_dssp TCEEECSCCEEEEEECTTTCCEEEEEETTSCEEECSEEEECCCE
T ss_pred CeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCEEEECCCC
Confidence 688999999999987 55565 588889989999999999874
No 83
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=91.04 E-value=0.38 Score=45.86 Aligned_cols=47 Identities=19% Similarity=0.061 Sum_probs=38.0
Q ss_pred HHHHhccCCeecCceeEEEEecCCeeEEEEc--CC--cEEEcCEEEEecCh
Q 017808 106 INTLAKGLDIRLGHRVTKITRHYIGVKVTVE--GG--KTFVADAVVVAVPL 152 (365)
Q Consensus 106 ~~~L~~~l~I~l~~~V~~I~~~~~~v~V~~~--~g--~~~~ad~VI~t~p~ 152 (365)
.+.|.+.++|+++++|++|..+++++.|++. +| +++.||.||+++..
T Consensus 222 ~~~l~~~V~i~~~~~v~~i~~~~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~ 272 (492)
T 3ic9_A 222 EKTFNEEFYFDAKARVISTIEKEDAVEVIYFDKSGQKTTESFQYVLAATGR 272 (492)
T ss_dssp HHHHHTTSEEETTCEEEEEEECSSSEEEEEECTTCCEEEEEESEEEECSCC
T ss_pred HHHHhhCcEEEECCEEEEEEEcCCEEEEEEEeCCCceEEEECCEEEEeeCC
Confidence 3444445789999999999998888888775 67 67999999999874
No 84
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=91.01 E-value=0.3 Score=46.09 Aligned_cols=40 Identities=25% Similarity=0.346 Sum_probs=34.9
Q ss_pred cCCeecCceeEEEEecCCe-eEEE-EcCCcEEEcCEEEEecCh
Q 017808 112 GLDIRLGHRVTKITRHYIG-VKVT-VEGGKTFVADAVVVAVPL 152 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~-v~V~-~~~g~~~~ad~VI~t~p~ 152 (365)
+++|+++++|++|..++++ +.|+ +.+|+ +.||.||+++..
T Consensus 225 Gv~i~~~~~v~~i~~~~~~~~~v~~~~~g~-i~aD~Vv~a~G~ 266 (463)
T 4dna_A 225 GIRILCEDIIQSVSADADGRRVATTMKHGE-IVADQVMLALGR 266 (463)
T ss_dssp TCEEECSCCEEEEEECTTSCEEEEESSSCE-EEESEEEECSCE
T ss_pred CCEEECCCEEEEEEEcCCCEEEEEEcCCCe-EEeCEEEEeeCc
Confidence 5789999999999987666 6788 88897 999999999875
No 85
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=90.74 E-value=0.4 Score=45.79 Aligned_cols=41 Identities=17% Similarity=0.157 Sum_probs=35.1
Q ss_pred cCCeecCceeEEEEecCCe-eEEEEcCCcE-EEcCEEEEecCh
Q 017808 112 GLDIRLGHRVTKITRHYIG-VKVTVEGGKT-FVADAVVVAVPL 152 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~-v~V~~~~g~~-~~ad~VI~t~p~ 152 (365)
+++|+++++|++|..++++ +.|++.+|++ +.||.||+++..
T Consensus 231 gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~D~vi~a~G~ 273 (500)
T 1onf_A 231 NINIVTFADVVEIKKVSDKNLSIHLSDGRIYEHFDHVIYCVGR 273 (500)
T ss_dssp TCEEECSCCEEEEEESSTTCEEEEETTSCEEEEESEEEECCCB
T ss_pred CCEEEECCEEEEEEEcCCceEEEEECCCcEEEECCEEEECCCC
Confidence 5789999999999976544 7788889987 999999999874
No 86
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=90.54 E-value=0.45 Score=44.68 Aligned_cols=48 Identities=15% Similarity=0.299 Sum_probs=36.2
Q ss_pred HHHHHhc-cCCeecCceeEEEEecCCeeEEEEcCCcEEEcCEEEEecCh
Q 017808 105 VINTLAK-GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 152 (365)
Q Consensus 105 L~~~L~~-~l~I~l~~~V~~I~~~~~~v~V~~~~g~~~~ad~VI~t~p~ 152 (365)
+.+.|.+ +++|+++++|++|...++++.....+|+++.||.||+++..
T Consensus 197 l~~~l~~~Gv~i~~~~~v~~i~~~~~~v~~v~~~g~~i~~D~vv~a~G~ 245 (452)
T 2cdu_A 197 LAKDYEAHGVNLVLGSKVAAFEEVDDEIITKTLDGKEIKSDIAILCIGF 245 (452)
T ss_dssp HHHHHHHTTCEEEESSCEEEEEEETTEEEEEETTSCEEEESEEEECCCE
T ss_pred HHHHHHHCCCEEEcCCeeEEEEcCCCeEEEEEeCCCEEECCEEEECcCC
Confidence 3344433 67899999999999766667533347889999999999874
No 87
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=90.42 E-value=0.37 Score=46.03 Aligned_cols=42 Identities=29% Similarity=0.249 Sum_probs=36.8
Q ss_pred cCCeecCceeEEEEecCCeeEEEEcCCc---EEEcCEEEEecChh
Q 017808 112 GLDIRLGHRVTKITRHYIGVKVTVEGGK---TFVADAVVVAVPLG 153 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~v~V~~~~g~---~~~ad~VI~t~p~~ 153 (365)
+++|+++++|++|+.++++|+|++.+|. +++||.||.|.-..
T Consensus 121 gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~ 165 (499)
T 2qa2_A 121 GAELLRGHTVRALTDEGDHVVVEVEGPDGPRSLTTRYVVGCDGGR 165 (499)
T ss_dssp TCEEEESCEEEEEEECSSCEEEEEECSSCEEEEEEEEEEECCCTT
T ss_pred CCEEEcCCEEEEEEEeCCEEEEEEEcCCCcEEEEeCEEEEccCcc
Confidence 5789999999999999999999888775 79999999988754
No 88
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=90.40 E-value=0.34 Score=46.81 Aligned_cols=39 Identities=18% Similarity=0.112 Sum_probs=34.4
Q ss_pred CeecCceeEEEEecCC--eeEEEEcCCcEEEcCEEEEecCh
Q 017808 114 DIRLGHRVTKITRHYI--GVKVTVEGGKTFVADAVVVAVPL 152 (365)
Q Consensus 114 ~I~l~~~V~~I~~~~~--~v~V~~~~g~~~~ad~VI~t~p~ 152 (365)
.|+++++|+++.++++ .|.|++.+|+++.||+||+|+-.
T Consensus 112 ~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~ 152 (542)
T 1w4x_A 112 GITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQ 152 (542)
T ss_dssp GEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCS
T ss_pred eEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCC
Confidence 5999999999998654 68899999989999999999974
No 89
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=90.29 E-value=0.35 Score=45.26 Aligned_cols=42 Identities=24% Similarity=0.348 Sum_probs=35.0
Q ss_pred cCCeecCceeEEEEe---------------cCCee-EEEEcCCcEE--EcCEEEEecChhh
Q 017808 112 GLDIRLGHRVTKITR---------------HYIGV-KVTVEGGKTF--VADAVVVAVPLGV 154 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~---------------~~~~v-~V~~~~g~~~--~ad~VI~t~p~~~ 154 (365)
+++|+++++|++|.. +++++ .|.+.+| ++ .||.||+|+-...
T Consensus 195 Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG~~s 254 (448)
T 3axb_A 195 GVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAGVWS 254 (448)
T ss_dssp TCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCGGGH
T ss_pred CCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCCcCH
Confidence 678999999999998 56665 5888888 68 9999999998653
No 90
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=90.27 E-value=0.43 Score=46.12 Aligned_cols=39 Identities=31% Similarity=0.277 Sum_probs=35.2
Q ss_pred CeecCceeEEEEecCC--eeEEEEcCCcEEEcCEEEEecCh
Q 017808 114 DIRLGHRVTKITRHYI--GVKVTVEGGKTFVADAVVVAVPL 152 (365)
Q Consensus 114 ~I~l~~~V~~I~~~~~--~v~V~~~~g~~~~ad~VI~t~p~ 152 (365)
.|+++++|+++.++++ +|.|++.+|+++.||+||+|+-.
T Consensus 105 ~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~ 145 (540)
T 3gwf_A 105 HFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGL 145 (540)
T ss_dssp GEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCS
T ss_pred eeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcc
Confidence 6899999999998766 78999999988999999999974
No 91
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=90.26 E-value=0.48 Score=44.76 Aligned_cols=41 Identities=29% Similarity=0.463 Sum_probs=35.0
Q ss_pred cCCeecCceeEEEEecCCeeEEEEc-C--Cc--EEEcCEEEEecCh
Q 017808 112 GLDIRLGHRVTKITRHYIGVKVTVE-G--GK--TFVADAVVVAVPL 152 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~v~V~~~-~--g~--~~~ad~VI~t~p~ 152 (365)
+++|+++++|++|..+++++.|++. + |+ ++.||.||+++..
T Consensus 224 gV~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vv~a~G~ 269 (464)
T 2eq6_A 224 GIRVRTKTKAVGYEKKKDGLHVRLEPAEGGEGEEVVVDKVLVAVGR 269 (464)
T ss_dssp TCEEECSEEEEEEEEETTEEEEEEEETTCCSCEEEEESEEEECSCE
T ss_pred CCEEEcCCEEEEEEEeCCEEEEEEeecCCCceeEEEcCEEEECCCc
Confidence 6789999999999988777877765 6 76 8999999999864
No 92
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=90.16 E-value=0.42 Score=44.89 Aligned_cols=40 Identities=28% Similarity=0.214 Sum_probs=34.7
Q ss_pred CCeecCceeEEEEecCCeeEEEEcC---Cc---EEEcCEEEEecCh
Q 017808 113 LDIRLGHRVTKITRHYIGVKVTVEG---GK---TFVADAVVVAVPL 152 (365)
Q Consensus 113 l~I~l~~~V~~I~~~~~~v~V~~~~---g~---~~~ad~VI~t~p~ 152 (365)
..|+++++|++|...+++|.|++.+ |+ ++.||+||+|+-.
T Consensus 130 ~~i~~~t~V~~v~~~~~~~~V~~~~~~~G~~~~~~~~d~VVvAtG~ 175 (447)
T 2gv8_A 130 PFIKLATDVLDIEKKDGSWVVTYKGTKAGSPISKDIFDAVSICNGH 175 (447)
T ss_dssp GGEECSEEEEEEEEETTEEEEEEEESSTTCCEEEEEESEEEECCCS
T ss_pred CeEEeCCEEEEEEeCCCeEEEEEeecCCCCeeEEEEeCEEEECCCC
Confidence 3599999999999988888888765 76 7999999999976
No 93
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=89.98 E-value=0.42 Score=45.68 Aligned_cols=42 Identities=38% Similarity=0.404 Sum_probs=36.6
Q ss_pred cCCeecCceeEEEEecCCeeEEEEcCCc---EEEcCEEEEecChh
Q 017808 112 GLDIRLGHRVTKITRHYIGVKVTVEGGK---TFVADAVVVAVPLG 153 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~v~V~~~~g~---~~~ad~VI~t~p~~ 153 (365)
+++|+++++|++|+.++++|+|++.+|. +++||.||.|.-..
T Consensus 120 gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~ 164 (500)
T 2qa1_A 120 GADIRRGHEVLSLTDDGAGVTVEVRGPEGKHTLRAAYLVGCDGGR 164 (500)
T ss_dssp TCEEEETCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECCCTT
T ss_pred CCEEECCcEEEEEEEcCCeEEEEEEcCCCCEEEEeCEEEECCCcc
Confidence 5789999999999999999998887774 79999999988754
No 94
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=89.96 E-value=0.51 Score=44.37 Aligned_cols=42 Identities=21% Similarity=0.251 Sum_probs=35.5
Q ss_pred cCCeecCceeEEEEecCCeeEEEEc---CCcE--EEcCEEEEecChh
Q 017808 112 GLDIRLGHRVTKITRHYIGVKVTVE---GGKT--FVADAVVVAVPLG 153 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~v~V~~~---~g~~--~~ad~VI~t~p~~ 153 (365)
+++|+++++|++|...++++.|++. +|+. +.||.||+|+-..
T Consensus 330 ~v~i~~~~~v~~v~~~~~~~~v~~~~~~~g~~~~~~~D~Vv~AtG~~ 376 (463)
T 3s5w_A 330 RHAFRCMTTVERATATAQGIELALRDAGSGELSVETYDAVILATGYE 376 (463)
T ss_dssp CSEEETTEEEEEEEEETTEEEEEEEETTTCCEEEEEESEEEECCCEE
T ss_pred CeEEEeCCEEEEEEecCCEEEEEEEEcCCCCeEEEECCEEEEeeCCC
Confidence 6689999999999998888888776 6754 8999999999753
No 95
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=89.94 E-value=0.55 Score=45.45 Aligned_cols=41 Identities=22% Similarity=0.480 Sum_probs=35.5
Q ss_pred cCCeecCceeEEEEe-------------------cCCeeEEEEcCCcEEEcCEEEEecCh
Q 017808 112 GLDIRLGHRVTKITR-------------------HYIGVKVTVEGGKTFVADAVVVAVPL 152 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~-------------------~~~~v~V~~~~g~~~~ad~VI~t~p~ 152 (365)
++++++++.|++|.. .++++.+++.+|+++.||.||+++..
T Consensus 206 GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~ 265 (565)
T 3ntd_A 206 GVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELLETDLLIMAIGV 265 (565)
T ss_dssp TCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEETTSCEEEESEEEECSCE
T ss_pred CCEEEeCCeEEEEeccccccccccccccccccccCCCcEEEEEcCCCEEEcCEEEECcCC
Confidence 678999999999987 46678888889999999999999853
No 96
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=89.93 E-value=0.5 Score=44.60 Aligned_cols=49 Identities=22% Similarity=0.306 Sum_probs=36.9
Q ss_pred HHHHHH-h-ccCCeecCceeEEEEecCCeeEEEEc--CC--cEEEcCEEEEecCh
Q 017808 104 PVINTL-A-KGLDIRLGHRVTKITRHYIGVKVTVE--GG--KTFVADAVVVAVPL 152 (365)
Q Consensus 104 ~L~~~L-~-~~l~I~l~~~V~~I~~~~~~v~V~~~--~g--~~~~ad~VI~t~p~ 152 (365)
.+.+.| . .+++|+++++|++|..+++++.|++. +| +++.||.||+++..
T Consensus 220 ~l~~~l~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~i~~D~vv~a~G~ 274 (468)
T 2qae_A 220 ALVGALAKNEKMKFMTSTKVVGGTNNGDSVSLEVEGKNGKRETVTCEALLVSVGR 274 (468)
T ss_dssp HHHHHHHHHTCCEEECSCEEEEEEECSSSEEEEEECC---EEEEEESEEEECSCE
T ss_pred HHHHHHhhcCCcEEEeCCEEEEEEEcCCeEEEEEEcCCCceEEEECCEEEECCCc
Confidence 344455 3 36789999999999987777777765 66 67999999999874
No 97
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=89.89 E-value=0.42 Score=40.40 Aligned_cols=41 Identities=22% Similarity=0.037 Sum_probs=33.7
Q ss_pred cCCeecCceeEEEEecCCee-EEEEcCCcEEEcCEEEEecChh
Q 017808 112 GLDIRLGHRVTKITRHYIGV-KVTVEGGKTFVADAVVVAVPLG 153 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~v-~V~~~~g~~~~ad~VI~t~p~~ 153 (365)
+++++ +++|++|..+++++ .|.+.+|+++.||.||+|+-..
T Consensus 83 gv~i~-~~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~~ 124 (232)
T 2cul_A 83 PLHLF-QATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSF 124 (232)
T ss_dssp TEEEE-ECCEEEEEEETTEEEEEEETTSCCEECSEEEECCTTC
T ss_pred CcEEE-EeEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCC
Confidence 45677 67999999887775 5888889889999999998763
No 98
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=89.65 E-value=0.37 Score=45.75 Aligned_cols=41 Identities=29% Similarity=0.226 Sum_probs=34.9
Q ss_pred cCCeecCceeEEEEecCCeeEEEEcC----CcEEEcCEEEEecCh
Q 017808 112 GLDIRLGHRVTKITRHYIGVKVTVEG----GKTFVADAVVVAVPL 152 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~v~V~~~~----g~~~~ad~VI~t~p~ 152 (365)
+++|+++++|++|..+++++.|++.+ |+++.||.||+++..
T Consensus 240 gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~~D~vv~a~G~ 284 (482)
T 1ojt_A 240 FDNIMVNTKTVAVEPKEDGVYVTFEGANAPKEPQRYDAVLVAAGR 284 (482)
T ss_dssp EEEEECSCEEEEEEEETTEEEEEEESSSCCSSCEEESCEEECCCE
T ss_pred CCEEEECCEEEEEEEcCCeEEEEEeccCCCceEEEcCEEEECcCC
Confidence 46799999999999887777787776 778999999999864
No 99
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=89.59 E-value=0.57 Score=42.30 Aligned_cols=42 Identities=29% Similarity=0.374 Sum_probs=36.3
Q ss_pred cCCeecCceeEEEEecCC-eeEEEEcCCcEEEcCEEEEecChh
Q 017808 112 GLDIRLGHRVTKITRHYI-GVKVTVEGGKTFVADAVVVAVPLG 153 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~-~v~V~~~~g~~~~ad~VI~t~p~~ 153 (365)
+++++++++|++|...++ .+.|++.+|+++.+|+||+|+-..
T Consensus 88 ~~~~~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~li~AtG~~ 130 (360)
T 3ab1_A 88 NPDVVLNETVTKYTKLDDGTFETRTNTGNVYRSRAVLIAAGLG 130 (360)
T ss_dssp CCEEECSCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCTTC
T ss_pred CCEEEcCCEEEEEEECCCceEEEEECCCcEEEeeEEEEccCCC
Confidence 457899999999998765 688999999899999999999763
No 100
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=89.45 E-value=0.51 Score=44.66 Aligned_cols=41 Identities=37% Similarity=0.374 Sum_probs=34.7
Q ss_pred cCCeecCceeEEEEecCCeeEEEEcCC---cEEEcCEEEEecCh
Q 017808 112 GLDIRLGHRVTKITRHYIGVKVTVEGG---KTFVADAVVVAVPL 152 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~v~V~~~~g---~~~~ad~VI~t~p~ 152 (365)
+++|+++++|++|..+++++.|+..++ +++.||.||+++..
T Consensus 235 Gv~v~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~D~vi~a~G~ 278 (476)
T 3lad_A 235 GLKILLGARVTGTEVKNKQVTVKFVDAEGEKSQAFDKLIVAVGR 278 (476)
T ss_dssp TEEEEETCEEEEEEECSSCEEEEEESSSEEEEEEESEEEECSCE
T ss_pred CCEEEECCEEEEEEEcCCEEEEEEEeCCCcEEEECCEEEEeeCC
Confidence 467999999999998888887777654 67999999999975
No 101
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=89.38 E-value=0.45 Score=46.10 Aligned_cols=39 Identities=31% Similarity=0.279 Sum_probs=35.1
Q ss_pred CeecCceeEEEEecCC--eeEEEEcCCcEEEcCEEEEecCh
Q 017808 114 DIRLGHRVTKITRHYI--GVKVTVEGGKTFVADAVVVAVPL 152 (365)
Q Consensus 114 ~I~l~~~V~~I~~~~~--~v~V~~~~g~~~~ad~VI~t~p~ 152 (365)
.|+++++|+++.++++ .|.|++.+|+++.||+||+|+-.
T Consensus 117 ~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~ 157 (549)
T 4ap3_A 117 DIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGP 157 (549)
T ss_dssp GEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCS
T ss_pred cEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCC
Confidence 6899999999998766 68899999999999999999984
No 102
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=89.23 E-value=0.66 Score=44.19 Aligned_cols=53 Identities=19% Similarity=0.150 Sum_probs=41.5
Q ss_pred CChHHHHHHHhc-cCCeecCceeEEEEecCCeeEEEEcCCcEEEcCEEEEecCh
Q 017808 100 RGYLPVINTLAK-GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 152 (365)
Q Consensus 100 gG~~~L~~~L~~-~l~I~l~~~V~~I~~~~~~v~V~~~~g~~~~ad~VI~t~p~ 152 (365)
+|...+-+.|.+ +++|++++.|++|..+++...|++.+|+++.||.||+++..
T Consensus 258 gG~~gle~~l~~~GV~v~~~~~v~~i~~~~~v~~v~~~~g~~i~aD~Vv~a~G~ 311 (493)
T 1y56_A 258 SKADEVIQELERWGIDYVHIPNVKRVEGNEKVERVIDMNNHEYKVDALIFADGR 311 (493)
T ss_dssp TTHHHHHHHHHHHTCEEEECSSEEEEECSSSCCEEEETTCCEEECSEEEECCCE
T ss_pred CCHHHHHHHHHhCCcEEEeCCeeEEEecCCceEEEEeCCCeEEEeCEEEECCCc
Confidence 455555555544 78999999999998765444577888989999999999875
No 103
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=89.19 E-value=0.51 Score=48.20 Aligned_cols=42 Identities=29% Similarity=0.207 Sum_probs=36.2
Q ss_pred cCCeecCceeEEEEecCCee-EEEEcCCcEEEcCEEEEecChhh
Q 017808 112 GLDIRLGHRVTKITRHYIGV-KVTVEGGKTFVADAVVVAVPLGV 154 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~v-~V~~~~g~~~~ad~VI~t~p~~~ 154 (365)
+++|+++++|++|..+++++ .|++.+| ++.||+||+|+-...
T Consensus 165 Gv~i~~~t~V~~i~~~~~~v~~V~t~~G-~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 165 GVTYRGSTTVTGIEQSGGRVTGVQTADG-VIPADIVVSCAGFWG 207 (830)
T ss_dssp TCEEECSCCEEEEEEETTEEEEEEETTE-EEECSEEEECCGGGH
T ss_pred CCEEECCceEEEEEEeCCEEEEEEECCc-EEECCEEEECCccch
Confidence 57899999999999888876 4888877 899999999998754
No 104
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=89.04 E-value=0.54 Score=42.51 Aligned_cols=41 Identities=24% Similarity=0.136 Sum_probs=35.9
Q ss_pred cCCeecCceeEEEEecCCeeEEEEcCCcEEEcCEEEEecChh
Q 017808 112 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLG 153 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~v~V~~~~g~~~~ad~VI~t~p~~ 153 (365)
+++|+++++|++|...++++.|++.+| ++.||+||+|+-..
T Consensus 102 gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~~d~vVlAtG~~ 142 (369)
T 3d1c_A 102 ELNIFENTVVTNISADDAYYTIATTTE-TYHADYIFVATGDY 142 (369)
T ss_dssp TCEEECSCCEEEEEECSSSEEEEESSC-CEEEEEEEECCCST
T ss_pred CCeEEeCCEEEEEEECCCeEEEEeCCC-EEEeCEEEECCCCC
Confidence 567999999999999888889988887 68999999999864
No 105
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=88.88 E-value=0.7 Score=43.54 Aligned_cols=41 Identities=29% Similarity=0.381 Sum_probs=34.3
Q ss_pred cCCeecCceeEEEEecCCeeEEEEc-CC--cEEEcCEEEEecCh
Q 017808 112 GLDIRLGHRVTKITRHYIGVKVTVE-GG--KTFVADAVVVAVPL 152 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~v~V~~~-~g--~~~~ad~VI~t~p~ 152 (365)
+++|+++++|++|..+++++.|++. +| +++.||.||+++..
T Consensus 226 gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~ 269 (464)
T 2a8x_A 226 GVTILTATKVESIADGGSQVTVTVTKDGVAQELKAEKVLQAIGF 269 (464)
T ss_dssp TCEEECSCEEEEEEECSSCEEEEEESSSCEEEEEESEEEECSCE
T ss_pred CCEEEeCcEEEEEEEcCCeEEEEEEcCCceEEEEcCEEEECCCC
Confidence 6789999999999987777777764 56 67999999999864
No 106
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=88.44 E-value=0.62 Score=42.48 Aligned_cols=39 Identities=28% Similarity=0.511 Sum_probs=33.7
Q ss_pred cCCeecCceeEEEEecCCeeEEEEcCCcEEEcCEEEEecChh
Q 017808 112 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLG 153 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~v~V~~~~g~~~~ad~VI~t~p~~ 153 (365)
+++|+++++|++|.. ++ .|++.+|+++.||.||.|.-..
T Consensus 121 gv~i~~~~~v~~i~~--~~-~v~~~~g~~~~ad~vV~AdG~~ 159 (379)
T 3alj_A 121 GVDISVNSEAVAADP--VG-RLTLQTGEVLEADLIVGADGVG 159 (379)
T ss_dssp TCEEESSCCEEEEET--TT-EEEETTSCEEECSEEEECCCTT
T ss_pred CCEEEeCCEEEEEEe--CC-EEEECCCCEEEcCEEEECCCcc
Confidence 568999999999988 44 7888899899999999998754
No 107
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=88.34 E-value=0.56 Score=44.10 Aligned_cols=42 Identities=31% Similarity=0.272 Sum_probs=34.4
Q ss_pred cCCeecCceeEEEEecCCeeEEEEc---CCcEEEcCEEEEecChh
Q 017808 112 GLDIRLGHRVTKITRHYIGVKVTVE---GGKTFVADAVVVAVPLG 153 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~v~V~~~---~g~~~~ad~VI~t~p~~ 153 (365)
+++|+++++|++|..+++++.|++. +++++.||.||+++...
T Consensus 225 gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~ 269 (455)
T 1ebd_A 225 GVEVVTNALAKGAEEREDGVTVTYEANGETKTIDADYVLVTVGRR 269 (455)
T ss_dssp TCEEEESEEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCEE
T ss_pred CCEEEeCCEEEEEEEeCCeEEEEEEeCCceeEEEcCEEEECcCCC
Confidence 5789999999999987777777654 45679999999998753
No 108
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=88.31 E-value=0.72 Score=43.58 Aligned_cols=41 Identities=22% Similarity=0.447 Sum_probs=34.1
Q ss_pred cCCeecCceeEEEEecCCe-eEEEE-----cCCcEEEcCEEEEecCh
Q 017808 112 GLDIRLGHRVTKITRHYIG-VKVTV-----EGGKTFVADAVVVAVPL 152 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~-v~V~~-----~~g~~~~ad~VI~t~p~ 152 (365)
+++|+++++|++|..++++ +.|+. .+++++.||.||+++..
T Consensus 234 Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~ 280 (474)
T 1zmd_A 234 GFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGR 280 (474)
T ss_dssp TCEEECSEEEEEEEECTTSCEEEEEEETTSCCCEEEEESEEEECSCE
T ss_pred CCEEEeCceEEEEEEcCCceEEEEEEecCCCCceEEEcCEEEECcCC
Confidence 6789999999999987766 77763 46678999999999875
No 109
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=88.07 E-value=0.4 Score=46.72 Aligned_cols=42 Identities=31% Similarity=0.275 Sum_probs=36.6
Q ss_pred cCCeecCceeEEEEecCCeeEEEE--cCC-cEEEcCEEEEecChh
Q 017808 112 GLDIRLGHRVTKITRHYIGVKVTV--EGG-KTFVADAVVVAVPLG 153 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~v~V~~--~~g-~~~~ad~VI~t~p~~ 153 (365)
+++|+++++|++|+.++++|.|++ .+| ++++||.||.|.-..
T Consensus 162 gv~i~~~~~v~~l~~~~~~v~v~~~~~~G~~~~~a~~vV~ADG~~ 206 (570)
T 3fmw_A 162 GAEIPRGHEVTRLRQDAEAVEVTVAGPSGPYPVRARYGVGCDGGR 206 (570)
T ss_dssp TEECCBSCEEEECCBCSSCEEEEEEETTEEEEEEESEEEECSCSS
T ss_pred CCEEEeCCEEEEEEEcCCeEEEEEEeCCCcEEEEeCEEEEcCCCC
Confidence 568999999999999999988877 678 789999999998754
No 110
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=88.05 E-value=0.83 Score=42.29 Aligned_cols=44 Identities=32% Similarity=0.419 Sum_probs=34.7
Q ss_pred HHHHHhc-cCCeecCceeEEEEecCCeeEEEEcCCcEEEcCEEEEecCh
Q 017808 105 VINTLAK-GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 152 (365)
Q Consensus 105 L~~~L~~-~l~I~l~~~V~~I~~~~~~v~V~~~~g~~~~ad~VI~t~p~ 152 (365)
+.+.|.+ +++|+++++|++|. + + .|++.+|+++.||.||+++..
T Consensus 193 l~~~l~~~GV~i~~~~~v~~i~-~-~--~v~~~~g~~i~~D~vi~a~G~ 237 (408)
T 2gqw_A 193 VARYHAAQGVDLRFERSVTGSV-D-G--VVLLDDGTRIAADMVVVGIGV 237 (408)
T ss_dssp HHHHHHHTTCEEEESCCEEEEE-T-T--EEEETTSCEEECSEEEECSCE
T ss_pred HHHHHHHcCcEEEeCCEEEEEE-C-C--EEEECCCCEEEcCEEEECcCC
Confidence 3344433 67899999999998 3 3 577789989999999999874
No 111
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=88.05 E-value=0.85 Score=44.04 Aligned_cols=40 Identities=20% Similarity=0.194 Sum_probs=36.8
Q ss_pred cCCeecCceeEEEEecCCeeEEEEcCCcEEEcCEEEEecC
Q 017808 112 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVP 151 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~v~V~~~~g~~~~ad~VI~t~p 151 (365)
++++++++.|+++...++++.|++.++.++.+|.|++++-
T Consensus 277 gi~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~D~vLvAvG 316 (542)
T 4b1b_A 277 GVMFKNGILPKKLTKMDDKILVEFSDKTSELYDTVLYAIG 316 (542)
T ss_dssp TCEEEETCCEEEEEEETTEEEEEETTSCEEEESEEEECSC
T ss_pred cceeecceEEEEEEecCCeEEEEEcCCCeEEEEEEEEccc
Confidence 5679999999999999999999999998999999999985
No 112
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=88.02 E-value=0.54 Score=42.92 Aligned_cols=42 Identities=14% Similarity=0.111 Sum_probs=34.9
Q ss_pred cCCeecCceeEEEEecCCeeE-EEE---cCCcEEEcCEEEEecChh
Q 017808 112 GLDIRLGHRVTKITRHYIGVK-VTV---EGGKTFVADAVVVAVPLG 153 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~v~-V~~---~~g~~~~ad~VI~t~p~~ 153 (365)
+++|+++++|++|..++++|. |++ .++.++.||.||.|.-..
T Consensus 116 gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~a~~vV~A~G~~ 161 (397)
T 3cgv_A 116 GADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADGFE 161 (397)
T ss_dssp TCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCCTT
T ss_pred CCEEEECCEEEEEEEeCCEEEEEEEEECCeEEEEEcCEEEECCCcc
Confidence 678999999999999888876 766 345689999999998654
No 113
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=87.93 E-value=0.33 Score=43.41 Aligned_cols=41 Identities=24% Similarity=0.273 Sum_probs=30.3
Q ss_pred hCCCCCEEEeccccCC-----CCcchhHHHHHHHHHHHHHHHHHHH
Q 017808 297 RIPVDNLFFAGEATSM-----SYPGSVHGAFSTGLMAAEDCRMRVL 337 (365)
Q Consensus 297 ~~p~~~l~~aG~~~~~-----~~~g~v~gA~~SG~~aA~~i~~~l~ 337 (365)
.+.++++|.|||+... ..+.+.-+++.||++||+.|++.|.
T Consensus 280 ~t~vpGv~aaGDaa~~v~g~~rmGp~~g~mi~SG~~AAe~I~~~la 325 (326)
T 3fpz_A 280 YAGVDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILKHFA 325 (326)
T ss_dssp CTTSBTEEECTHHHHHHHTCCBCCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred EECCCCEEEEchHhccccCCCcCchHHHHHHHHHHHHHHHHHHHhc
Confidence 3457899999997541 1112556678999999999999874
No 114
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=87.87 E-value=0.23 Score=45.95 Aligned_cols=50 Identities=20% Similarity=0.157 Sum_probs=33.6
Q ss_pred HHHHHHHhc-----cCCeecCceeE---------EEEecCCeeEEEEcCCcEEEcCEEEEecChh
Q 017808 103 LPVINTLAK-----GLDIRLGHRVT---------KITRHYIGVKVTVEGGKTFVADAVVVAVPLG 153 (365)
Q Consensus 103 ~~L~~~L~~-----~l~I~l~~~V~---------~I~~~~~~v~V~~~~g~~~~ad~VI~t~p~~ 153 (365)
..+.+.|.+ +++|+++++|+ +|..++++|.|++.+| ++.||.||+|+-..
T Consensus 172 ~~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~~~v~v~~~~g-~i~a~~VV~A~G~~ 235 (405)
T 3c4n_A 172 GSLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTNTHQIVVHETR-QIRAGVIIVAAGAA 235 (405)
T ss_dssp HHHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC-------CBCCE-EEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEeeCCeEEEEECCc-EEECCEEEECCCcc
Confidence 345555543 56799999999 8888777888877777 89999999999875
No 115
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=87.82 E-value=0.8 Score=41.92 Aligned_cols=50 Identities=10% Similarity=0.034 Sum_probs=38.1
Q ss_pred HHHHHhc-cCCeecCceeEEEEecC-CeeEEEE-cCCc--EEEcCEEEEecChhh
Q 017808 105 VINTLAK-GLDIRLGHRVTKITRHY-IGVKVTV-EGGK--TFVADAVVVAVPLGV 154 (365)
Q Consensus 105 L~~~L~~-~l~I~l~~~V~~I~~~~-~~v~V~~-~~g~--~~~ad~VI~t~p~~~ 154 (365)
|.+.+.+ +++|+++++|++|..++ +++.|++ .+|+ +++||.||.|.-..-
T Consensus 109 L~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~~~~~a~~vV~AdG~~S 163 (394)
T 1k0i_A 109 LMEAREACGATTVYQAAEVRLHDLQGERPYVTFERDGERLRLDCDYIAGCDGFHG 163 (394)
T ss_dssp HHHHHHHTTCEEESSCEEEEEECTTSSSCEEEEEETTEEEEEECSEEEECCCTTC
T ss_pred HHHHHHhcCCeEEeceeEEEEEEecCCceEEEEecCCcEEEEEeCEEEECCCCCc
Confidence 3443333 57899999999999864 5678877 7887 799999999987643
No 116
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=87.75 E-value=0.94 Score=39.82 Aligned_cols=41 Identities=22% Similarity=0.247 Sum_probs=34.4
Q ss_pred cCCeecCceeEEEEecCCeeEEEEcCCcEEEcCEEEEecChh
Q 017808 112 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLG 153 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~v~V~~~~g~~~~ad~VI~t~p~~ 153 (365)
++++++ ++|.+|..+++.+.|++.+|+++.+|+||+|+-..
T Consensus 84 ~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~d~lvlAtG~~ 124 (323)
T 3f8d_A 84 EVPVLL-DIVEKIENRGDEFVVKTKRKGEFKADSVILGIGVK 124 (323)
T ss_dssp TCCEEE-SCEEEEEEC--CEEEEESSSCEEEEEEEEECCCCE
T ss_pred CCEEEE-EEEEEEEecCCEEEEEECCCCEEEcCEEEECcCCC
Confidence 568888 99999999888899999998899999999998654
No 117
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=87.73 E-value=0.92 Score=44.02 Aligned_cols=41 Identities=32% Similarity=0.297 Sum_probs=32.3
Q ss_pred cCCeecCceeEEEEecC-Cee---EEEEcCCc--EEEcCEEEEecCh
Q 017808 112 GLDIRLGHRVTKITRHY-IGV---KVTVEGGK--TFVADAVVVAVPL 152 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~-~~v---~V~~~~g~--~~~ad~VI~t~p~ 152 (365)
+++|+++++|++|..++ ++| .+.+.+|+ ++.||.||+|+-.
T Consensus 264 gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg 310 (566)
T 1qo8_A 264 GIDTRLNSRVVKLVVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGG 310 (566)
T ss_dssp TCCEECSEEEEEEEECTTSBEEEEEEEETTTEEEEEEEEEEEECCCC
T ss_pred CCEEEeCCEEEEEEECCCCcEEEEEEEeCCCcEEEEEcCEEEEecCC
Confidence 67899999999999877 654 34444775 6899999999865
No 118
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=87.72 E-value=0.94 Score=39.92 Aligned_cols=41 Identities=15% Similarity=0.295 Sum_probs=31.8
Q ss_pred cCCeecCceeEEEEecCCeeE-EEEcC----C--cEEEcCEEEEecCh
Q 017808 112 GLDIRLGHRVTKITRHYIGVK-VTVEG----G--KTFVADAVVVAVPL 152 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~v~-V~~~~----g--~~~~ad~VI~t~p~ 152 (365)
+++|+++++|++|..+++++. |++.+ | +++.||.||+++..
T Consensus 198 gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~ 245 (320)
T 1trb_A 198 NIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGH 245 (320)
T ss_dssp SEEEECSCEEEEEEECSSSEEEEEEECCTTCCCCEEEECSEEEECSCE
T ss_pred CeEEEcCceeEEEEcCCCceEEEEEEeccCCCceEEEEcCEEEEEeCC
Confidence 678999999999998765543 55443 4 57899999999874
No 119
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=87.64 E-value=0.93 Score=42.71 Aligned_cols=41 Identities=15% Similarity=0.158 Sum_probs=34.4
Q ss_pred cCCeecCceeEEEEecCCeeEEEEcCCcEEEcCEEEEecChh
Q 017808 112 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLG 153 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~v~V~~~~g~~~~ad~VI~t~p~~ 153 (365)
+++|+++++|++|..+++.+.|++. +.++.||.||+++...
T Consensus 230 Gv~i~~~~~v~~i~~~~~~~~v~~~-~~~i~aD~Vv~a~G~~ 270 (467)
T 1zk7_A 230 GIEVLEHTQASQVAHMDGEFVLTTT-HGELRADKLLVATGRT 270 (467)
T ss_dssp TCEEETTCCEEEEEEETTEEEEEET-TEEEEESEEEECSCEE
T ss_pred CCEEEcCCEEEEEEEeCCEEEEEEC-CcEEEcCEEEECCCCC
Confidence 6789999999999987777777776 4589999999998753
No 120
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=87.63 E-value=0.92 Score=43.83 Aligned_cols=42 Identities=26% Similarity=0.283 Sum_probs=35.5
Q ss_pred cCCeecCceeEEEEecCCe--eEEEEcCCcEEEcCEEEEecChhh
Q 017808 112 GLDIRLGHRVTKITRHYIG--VKVTVEGGKTFVADAVVVAVPLGV 154 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~--v~V~~~~g~~~~ad~VI~t~p~~~ 154 (365)
+++|+++ +|++|..++++ +.|++.+|+++.||.||.|.-..-
T Consensus 209 Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S 252 (550)
T 2e4g_A 209 GVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRG 252 (550)
T ss_dssp CCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGC
T ss_pred CcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCch
Confidence 6789999 99999986655 568888998899999999997654
No 121
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=87.51 E-value=0.81 Score=43.15 Aligned_cols=42 Identities=36% Similarity=0.513 Sum_probs=34.0
Q ss_pred cCCeecCceeEEEEecCCeeEEEEc---CC--cEEEcCEEEEecChh
Q 017808 112 GLDIRLGHRVTKITRHYIGVKVTVE---GG--KTFVADAVVVAVPLG 153 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~v~V~~~---~g--~~~~ad~VI~t~p~~ 153 (365)
+++|+++++|++|..+++++.|++. +| +++.||.||+++...
T Consensus 232 gv~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~ 278 (470)
T 1dxl_A 232 GMKFKLKTKVVGVDTSGDGVKLTVEPSAGGEQTIIEADVVLVSAGRT 278 (470)
T ss_dssp SCCEECSEEEEEEECSSSSEEEEEEESSSCCCEEEEESEEECCCCEE
T ss_pred CCEEEeCCEEEEEEEcCCeEEEEEEecCCCcceEEECCEEEECCCCC
Confidence 6789999999999987777776654 44 679999999998753
No 122
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=87.42 E-value=0.72 Score=40.82 Aligned_cols=40 Identities=13% Similarity=0.138 Sum_probs=35.0
Q ss_pred cCCeecCceeEEEEecCC-eeEEEEcCCcEEEcCEEEEecCh
Q 017808 112 GLDIRLGHRVTKITRHYI-GVKVTVEGGKTFVADAVVVAVPL 152 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~-~v~V~~~~g~~~~ad~VI~t~p~ 152 (365)
+++++++++|.+|...++ .+.|++.+|+ +.+|+||+|+-.
T Consensus 81 ~~~~~~~~~v~~i~~~~~~~~~v~~~~g~-~~~d~vVlAtG~ 121 (332)
T 3lzw_A 81 DQTICLEQAVESVEKQADGVFKLVTNEET-HYSKTVIITAGN 121 (332)
T ss_dssp CCEEECSCCEEEEEECTTSCEEEEESSEE-EEEEEEEECCTT
T ss_pred CCcEEccCEEEEEEECCCCcEEEEECCCE-EEeCEEEECCCC
Confidence 457899999999998877 6889998885 999999999976
No 123
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=87.26 E-value=1 Score=43.79 Aligned_cols=41 Identities=24% Similarity=0.158 Sum_probs=32.1
Q ss_pred cCCeecCceeEEEEecC-Cee---EEEEcCCc--EEEcCEEEEecCh
Q 017808 112 GLDIRLGHRVTKITRHY-IGV---KVTVEGGK--TFVADAVVVAVPL 152 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~-~~v---~V~~~~g~--~~~ad~VI~t~p~ 152 (365)
+++|+++++|++|..++ ++| .+...+|+ ++.||.||+|+-.
T Consensus 269 gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg 315 (571)
T 1y0p_A 269 NIDLRMNTRGIEVLKDDKGTVKGILVKGMYKGYYWVKADAVILATGG 315 (571)
T ss_dssp TCEEESSEEEEEEEECTTSCEEEEEEEETTTEEEEEECSEEEECCCC
T ss_pred CCEEEeCCEeeEeEEcCCCeEEEEEEEeCCCcEEEEECCeEEEeCCC
Confidence 57899999999999876 544 34443675 6899999999865
No 124
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=87.10 E-value=1 Score=42.29 Aligned_cols=43 Identities=21% Similarity=0.021 Sum_probs=34.7
Q ss_pred cCCeecCceeEEEEecCCeeE-EEEc---CCc--EEEcCEEEEecChhh
Q 017808 112 GLDIRLGHRVTKITRHYIGVK-VTVE---GGK--TFVADAVVVAVPLGV 154 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~v~-V~~~---~g~--~~~ad~VI~t~p~~~ 154 (365)
+++|+++++|++|..++++|. |++. +|+ ++.||.||.|.-..-
T Consensus 114 gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s 162 (453)
T 3atr_A 114 GVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELTVYSKVVVEATGYSR 162 (453)
T ss_dssp TCEEESSEEEEEEEEETTEEEEEEEEETTTTEEEEEECSEEEECCGGGC
T ss_pred CCEEEeCcEEEEEEEECCEEEEEEEEEcCCCceEEEEcCEEEECcCCch
Confidence 578999999999998888764 5443 676 789999999987654
No 125
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=87.05 E-value=0.87 Score=43.27 Aligned_cols=41 Identities=39% Similarity=0.548 Sum_probs=34.2
Q ss_pred cCCeecCceeEEEEecCCeeEEEEcC---C--cEEEcCEEEEecCh
Q 017808 112 GLDIRLGHRVTKITRHYIGVKVTVEG---G--KTFVADAVVVAVPL 152 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~v~V~~~~---g--~~~~ad~VI~t~p~ 152 (365)
+++|+++++|++|..+++++.|++.+ | +++.||.||+++..
T Consensus 253 gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G~ 298 (491)
T 3urh_A 253 GIDFKLGAKVTGAVKSGDGAKVTFEPVKGGEATTLDAEVVLIATGR 298 (491)
T ss_dssp TCEEECSEEEEEEEEETTEEEEEEEETTSCCCEEEEESEEEECCCC
T ss_pred CCEEEECCeEEEEEEeCCEEEEEEEecCCCceEEEEcCEEEEeeCC
Confidence 57899999999999988887776653 5 57999999999874
No 126
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=86.99 E-value=0.72 Score=44.62 Aligned_cols=39 Identities=18% Similarity=0.106 Sum_probs=34.6
Q ss_pred CeecCceeEEEEecCC--eeEEEEcCCcEEEcCEEEEecCh
Q 017808 114 DIRLGHRVTKITRHYI--GVKVTVEGGKTFVADAVVVAVPL 152 (365)
Q Consensus 114 ~I~l~~~V~~I~~~~~--~v~V~~~~g~~~~ad~VI~t~p~ 152 (365)
.|+++++|+++.++++ .|.|++.+|+++.||+||+|+-.
T Consensus 105 ~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~ 145 (545)
T 3uox_A 105 HYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGP 145 (545)
T ss_dssp GEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCS
T ss_pred cEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCC
Confidence 6899999999998654 68899999999999999999984
No 127
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=86.95 E-value=0.69 Score=42.72 Aligned_cols=49 Identities=22% Similarity=0.273 Sum_probs=38.0
Q ss_pred HHHHHHhc--c-CCeecCceeEEEEecCCeeEEEEcC---C--cEEEcCEEEEecChh
Q 017808 104 PVINTLAK--G-LDIRLGHRVTKITRHYIGVKVTVEG---G--KTFVADAVVVAVPLG 153 (365)
Q Consensus 104 ~L~~~L~~--~-l~I~l~~~V~~I~~~~~~v~V~~~~---g--~~~~ad~VI~t~p~~ 153 (365)
.|.+.+.+ + ++|+++++|++|.. +++|.|++.+ | .++.||.||.|.-..
T Consensus 112 ~L~~~~~~~~g~~~v~~~~~v~~i~~-~~~v~v~~~~~~~g~~~~~~ad~vV~AdG~~ 168 (410)
T 3c96_A 112 ILLAAVRERLGQQAVRTGLGVERIEE-RDGRVLIGARDGHGKPQALGADVLVGADGIH 168 (410)
T ss_dssp HHHHHHHHHHCTTSEEESEEEEEEEE-ETTEEEEEEEETTSCEEEEEESEEEECCCTT
T ss_pred HHHHHHHhhCCCcEEEECCEEEEEec-CCccEEEEecCCCCCceEEecCEEEECCCcc
Confidence 44455543 3 47999999999998 7788887765 7 578999999998764
No 128
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=86.81 E-value=0.74 Score=42.48 Aligned_cols=44 Identities=23% Similarity=0.435 Sum_probs=34.1
Q ss_pred HHHHHhc-cCCeecCceeEEEEecCCeeEEEEcCCcEEEcCEEEEecCh
Q 017808 105 VINTLAK-GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 152 (365)
Q Consensus 105 L~~~L~~-~l~I~l~~~V~~I~~~~~~v~V~~~~g~~~~ad~VI~t~p~ 152 (365)
+.+.|.+ +++++++++|++|..+ + |++.+|+++.||.||++++.
T Consensus 224 ~~~~l~~~gV~~~~~~~v~~i~~~--~--v~~~~g~~~~~D~vi~a~G~ 268 (409)
T 3h8l_A 224 VASIYNQLGIKLVHNFKIKEIREH--E--IVDEKGNTIPADITILLPPY 268 (409)
T ss_dssp HHHHHHHHTCEEECSCCEEEECSS--E--EEETTSCEEECSEEEEECCE
T ss_pred HHHHHHHCCCEEEcCCceEEECCC--e--EEECCCCEEeeeEEEECCCC
Confidence 3333433 6899999999999743 3 67789999999999999874
No 129
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=86.65 E-value=0.9 Score=43.43 Aligned_cols=52 Identities=23% Similarity=0.268 Sum_probs=35.6
Q ss_pred ChHHHHHHHhc-----cCCeecCceeEEEEec-CCeeE-EEEc-CCc--EEEcC-EEEEecCh
Q 017808 101 GYLPVINTLAK-----GLDIRLGHRVTKITRH-YIGVK-VTVE-GGK--TFVAD-AVVVAVPL 152 (365)
Q Consensus 101 G~~~L~~~L~~-----~l~I~l~~~V~~I~~~-~~~v~-V~~~-~g~--~~~ad-~VI~t~p~ 152 (365)
|...+.+.|.+ +++|+++++|++|..+ +++|. |.+. +|+ ++.|| .||+|+-.
T Consensus 200 g~~~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG 262 (510)
T 4at0_A 200 GGYMLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGS 262 (510)
T ss_dssp TTHHHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCC
T ss_pred CHHHHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCC
Confidence 43356665543 5789999999999987 45443 4433 342 58996 99999864
No 130
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=86.60 E-value=0.78 Score=40.69 Aligned_cols=51 Identities=6% Similarity=0.011 Sum_probs=38.4
Q ss_pred hHHHHHHHhc--cCCeecCceeEEEEecCCeeE-EEEcC-----CcEEEcCEEEEecCh
Q 017808 102 YLPVINTLAK--GLDIRLGHRVTKITRHYIGVK-VTVEG-----GKTFVADAVVVAVPL 152 (365)
Q Consensus 102 ~~~L~~~L~~--~l~I~l~~~V~~I~~~~~~v~-V~~~~-----g~~~~ad~VI~t~p~ 152 (365)
...+.+.|.+ +++|+++++|.+|..+++++. |++.+ ++++.||.||+++..
T Consensus 211 ~~~~~~~l~~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~ 269 (338)
T 3itj_A 211 STIMQKRAEKNEKIEILYNTVALEAKGDGKLLNALRIKNTKKNEETDLPVSGLFYAIGH 269 (338)
T ss_dssp CHHHHHHHHHCTTEEEECSEEEEEEEESSSSEEEEEEEETTTTEEEEEECSEEEECSCE
T ss_pred CHHHHHHHHhcCCeEEeecceeEEEEcccCcEEEEEEEECCCCceEEEEeCEEEEEeCC
Confidence 4556666643 678999999999998877543 55544 457899999999874
No 131
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=86.56 E-value=1.1 Score=39.19 Aligned_cols=40 Identities=28% Similarity=0.423 Sum_probs=34.6
Q ss_pred cCCeecCceeEEEEecCCeeEEEEcCCcEEEcCEEEEecCh
Q 017808 112 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 152 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~v~V~~~~g~~~~ad~VI~t~p~ 152 (365)
++++++ ++|.+|...++++.|++.+|+++.+|+||+|+-.
T Consensus 73 ~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~~~vv~AtG~ 112 (311)
T 2q0l_A 73 GLKHEM-TAVQRVSKKDSHFVILAEDGKTFEAKSVIIATGG 112 (311)
T ss_dssp SCEEEC-SCEEEEEEETTEEEEEETTSCEEEEEEEEECCCE
T ss_pred CCEEEE-EEEEEEEEcCCEEEEEEcCCCEEECCEEEECCCC
Confidence 456777 7899999888888888888889999999999974
No 132
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=86.52 E-value=0.41 Score=44.07 Aligned_cols=40 Identities=18% Similarity=0.247 Sum_probs=35.9
Q ss_pred CCeecCceeEEEEecCCeeEEEEcCCcEEEcCEEEEecCh
Q 017808 113 LDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 152 (365)
Q Consensus 113 l~I~l~~~V~~I~~~~~~v~V~~~~g~~~~ad~VI~t~p~ 152 (365)
++|++++.|..++.++++..|++.+|+++.||.||+++|.
T Consensus 217 i~v~~~~~v~~v~~~~~~~~v~~~~g~~i~~D~vi~~~g~ 256 (401)
T 3vrd_B 217 IEWHPGPDAAVVKTDTEAMTVETSFGETFKAAVINLIPPQ 256 (401)
T ss_dssp EEEECTTTTCEEEEETTTTEEEETTSCEEECSEEEECCCE
T ss_pred cEEEeCceEEEEEecccceEEEcCCCcEEEeeEEEEecCc
Confidence 4699999999999888888899999999999999998764
No 133
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=86.50 E-value=0.87 Score=43.05 Aligned_cols=41 Identities=32% Similarity=0.436 Sum_probs=33.2
Q ss_pred cCCeecCceeEEEEe--cCCeeEEEEc-----CCcEEEcCEEEEecCh
Q 017808 112 GLDIRLGHRVTKITR--HYIGVKVTVE-----GGKTFVADAVVVAVPL 152 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~--~~~~v~V~~~-----~g~~~~ad~VI~t~p~ 152 (365)
+++|+++++|++|.. +++.+.|++. +++++.||.||+++..
T Consensus 238 gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~ 285 (478)
T 1v59_A 238 GLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGR 285 (478)
T ss_dssp TCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECSCE
T ss_pred CCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEECCCC
Confidence 578999999999997 5666777665 4567999999999864
No 134
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=86.45 E-value=1.3 Score=42.30 Aligned_cols=42 Identities=14% Similarity=0.119 Sum_probs=35.5
Q ss_pred cCCeecCceeEEEEecCCe--eEEEEcCCcEEEcCEEEEecChhh
Q 017808 112 GLDIRLGHRVTKITRHYIG--VKVTVEGGKTFVADAVVVAVPLGV 154 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~--v~V~~~~g~~~~ad~VI~t~p~~~ 154 (365)
+++|+++ +|++|..++++ +.|++.+|+++.||.||.|.-..-
T Consensus 187 gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S 230 (511)
T 2weu_A 187 GVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRG 230 (511)
T ss_dssp TCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGC
T ss_pred CCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcch
Confidence 6789999 99999986655 678888998899999999997753
No 135
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=86.41 E-value=1.2 Score=43.24 Aligned_cols=41 Identities=41% Similarity=0.355 Sum_probs=30.9
Q ss_pred cCCeecCceeEEEEecC-Cee---EEEEcCCc--EEEcCEEEEecCh
Q 017808 112 GLDIRLGHRVTKITRHY-IGV---KVTVEGGK--TFVADAVVVAVPL 152 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~-~~v---~V~~~~g~--~~~ad~VI~t~p~ 152 (365)
+++|+++++|++|..++ ++| .+.+.+|+ ++.||.||+|+-.
T Consensus 269 gv~i~~~t~v~~l~~~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg 315 (572)
T 1d4d_A 269 GTDIRLNSRVVRILEDASGKVTGVLVKGEYTGYYVIKADAVVIAAGG 315 (572)
T ss_dssp TCEEESSEEEEEEEEC--CCEEEEEEEETTTEEEEEECSEEEECCCC
T ss_pred CCeEEecCEEEEEEECCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCC
Confidence 67899999999998776 543 34444674 6899999999864
No 136
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=86.32 E-value=0.96 Score=42.64 Aligned_cols=49 Identities=24% Similarity=0.349 Sum_probs=38.2
Q ss_pred HHHHHHhcc--CCeecCceeEEEEecC-CeeEEEEc--CCc--EEEcCEEEEecCh
Q 017808 104 PVINTLAKG--LDIRLGHRVTKITRHY-IGVKVTVE--GGK--TFVADAVVVAVPL 152 (365)
Q Consensus 104 ~L~~~L~~~--l~I~l~~~V~~I~~~~-~~v~V~~~--~g~--~~~ad~VI~t~p~ 152 (365)
.+.+.+.+. ++|+++++|++|..++ +++.|++. +|+ ++.||.||+++..
T Consensus 215 ~~~~~l~~~l~v~i~~~~~v~~i~~~~~~~v~v~~~~~~G~~~~i~~D~vi~a~G~ 270 (466)
T 3l8k_A 215 DIVNTLLSILKLNIKFNSPVTEVKKIKDDEYEVIYSTKDGSKKSIFTNSVVLAAGR 270 (466)
T ss_dssp HHHHHHHHHHCCCEECSCCEEEEEEEETTEEEEEECCTTSCCEEEEESCEEECCCE
T ss_pred HHHHHHHhcCEEEEEECCEEEEEEEcCCCcEEEEEEecCCceEEEEcCEEEECcCC
Confidence 344444332 7899999999999877 78888877 676 7999999999975
No 137
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=86.13 E-value=1.2 Score=38.62 Aligned_cols=35 Identities=23% Similarity=0.368 Sum_probs=32.0
Q ss_pred CceeEEEEecCCeeEEEEcCCcEEEcCEEEEecCh
Q 017808 118 GHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 152 (365)
Q Consensus 118 ~~~V~~I~~~~~~v~V~~~~g~~~~ad~VI~t~p~ 152 (365)
+.+|+.|..+++++.|++.+|+++.+|+||+|+-.
T Consensus 76 ~~~v~~i~~~~~~~~v~~~~g~~~~~d~vviAtG~ 110 (297)
T 3fbs_A 76 EGRVTDAKGSFGEFIVEIDGGRRETAGRLILAMGV 110 (297)
T ss_dssp ESCEEEEEEETTEEEEEETTSCEEEEEEEEECCCC
T ss_pred EeEEEEEEEcCCeEEEEECCCCEEEcCEEEECCCC
Confidence 66999999998889999999989999999999976
No 138
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=86.10 E-value=1.2 Score=42.14 Aligned_cols=41 Identities=15% Similarity=0.050 Sum_probs=32.9
Q ss_pred cCCeecCceeEEEEecCC-eeEEEEcCCc-----EEEcCEEEEecCh
Q 017808 112 GLDIRLGHRVTKITRHYI-GVKVTVEGGK-----TFVADAVVVAVPL 152 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~-~v~V~~~~g~-----~~~ad~VI~t~p~ 152 (365)
+++|+++++|.+|...++ .+.|++.+++ ++.||.||+++..
T Consensus 241 Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~ 287 (483)
T 3dgh_A 241 GIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGR 287 (483)
T ss_dssp TCCEEETEEEEEEEECTTSCEEEEEEETTTCCEEEEEESEEEECSCE
T ss_pred CCEEEeCCEEEEEEEcCCCcEEEEEecCCCCceeEEEcCEEEECccc
Confidence 678999999999998655 4667766553 7899999999864
No 139
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=85.90 E-value=0.79 Score=42.13 Aligned_cols=39 Identities=15% Similarity=0.210 Sum_probs=33.7
Q ss_pred cCCeecCceeEEEEecCCeeEEEEcCCcEEEcCEEEEecCh
Q 017808 112 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 152 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~v~V~~~~g~~~~ad~VI~t~p~ 152 (365)
+++++++++|++|...+. +|++.+|+++.+|++|+|+-.
T Consensus 76 ~i~~~~~~~V~~id~~~~--~v~~~~g~~~~yd~lvlAtG~ 114 (385)
T 3klj_A 76 NIKVITSEFATSIDPNNK--LVTLKSGEKIKYEKLIIASGS 114 (385)
T ss_dssp TCEEECSCCEEEEETTTT--EEEETTSCEEECSEEEECCCE
T ss_pred CCEEEeCCEEEEEECCCC--EEEECCCCEEECCEEEEecCC
Confidence 678999999999987765 467789999999999999975
No 140
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=85.87 E-value=0.69 Score=43.41 Aligned_cols=40 Identities=25% Similarity=0.465 Sum_probs=30.9
Q ss_pred CCCCCEEEeccccCC-CCcc--hhHHHHHHHHHHHHHHHHHHH
Q 017808 298 IPVDNLFFAGEATSM-SYPG--SVHGAFSTGLMAAEDCRMRVL 337 (365)
Q Consensus 298 ~p~~~l~~aG~~~~~-~~~g--~v~gA~~SG~~aA~~i~~~l~ 337 (365)
+++++||+|||-+.. ++.| .+..|+.+|+.|++.+.+...
T Consensus 402 ~~i~GLy~aGEv~~v~g~~GG~~l~~a~~~G~~Ag~~aa~~~~ 444 (447)
T 2i0z_A 402 KFTNGLYFCGEVLDIHGYTGGYNITSALVTGRIAGTTAGENAK 444 (447)
T ss_dssp SSSBTEEECGGGBSCBCCTTTHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CcCCCEEEEEeeccCccCCCcHHHHHHHHHHHHHHHHHHHhhh
Confidence 578999999998774 2222 567799999999998876543
No 141
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=85.82 E-value=1.3 Score=42.12 Aligned_cols=43 Identities=26% Similarity=0.169 Sum_probs=35.4
Q ss_pred cCCeecCceeEEEEecCCeeEEEE---cCCc--EEEcCEEEEecChhh
Q 017808 112 GLDIRLGHRVTKITRHYIGVKVTV---EGGK--TFVADAVVVAVPLGV 154 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~v~V~~---~~g~--~~~ad~VI~t~p~~~ 154 (365)
+++|+++++|++|..+++.+.|++ .+|+ ++.||.||.|+-+..
T Consensus 163 Gv~i~~~~~V~~l~~~~~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s 210 (501)
T 2qcu_A 163 GGEVLTRTRATSARRENGLWIVEAEDIDTGKKYSWQARGLVNATGPWV 210 (501)
T ss_dssp TCEEECSEEEEEEEEETTEEEEEEEETTTCCEEEEEESCEEECCGGGH
T ss_pred CCEEEcCcEEEEEEEeCCEEEEEEEECCCCCEEEEECCEEEECCChhH
Confidence 578999999999998876666776 3575 789999999998764
No 142
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=85.81 E-value=1.1 Score=42.17 Aligned_cols=41 Identities=24% Similarity=0.201 Sum_probs=33.2
Q ss_pred cCC--eecCceeEEEEecCC--eeEEEEcC---C--cEEEcCEEEEecCh
Q 017808 112 GLD--IRLGHRVTKITRHYI--GVKVTVEG---G--KTFVADAVVVAVPL 152 (365)
Q Consensus 112 ~l~--I~l~~~V~~I~~~~~--~v~V~~~~---g--~~~~ad~VI~t~p~ 152 (365)
+++ |+++++|+.|...++ +|.|++.+ | .++.||+||+|+..
T Consensus 115 gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d~VVvAtG~ 164 (464)
T 2xve_A 115 GVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYVVCCTGH 164 (464)
T ss_dssp TCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECCCS
T ss_pred CCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcCEEEECCCC
Confidence 555 899999999998766 67777654 4 57899999999984
No 143
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=85.59 E-value=1 Score=43.59 Aligned_cols=39 Identities=18% Similarity=0.231 Sum_probs=33.6
Q ss_pred eecCceeEEEEecCCeeEEEEcC---C--cEEEcCEEEEecChh
Q 017808 115 IRLGHRVTKITRHYIGVKVTVEG---G--KTFVADAVVVAVPLG 153 (365)
Q Consensus 115 I~l~~~V~~I~~~~~~v~V~~~~---g--~~~~ad~VI~t~p~~ 153 (365)
|+++++|++|..++++|+|++.+ | .+++||.||.|.-..
T Consensus 152 v~~~~~v~~~~~~~~~v~v~~~~~~~G~~~~i~a~~vVgADG~~ 195 (549)
T 2r0c_A 152 LRTRSRLDSFEQRDDHVRATITDLRTGATRAVHARYLVACDGAS 195 (549)
T ss_dssp EECSEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEEEECCCTT
T ss_pred cccCcEEEEEEEeCCEEEEEEEECCCCCEEEEEeCEEEECCCCC
Confidence 99999999999999998887665 6 478999999998754
No 144
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=85.53 E-value=1.1 Score=39.20 Aligned_cols=42 Identities=14% Similarity=0.158 Sum_probs=34.9
Q ss_pred cCCeecCceeEEEEecC---CeeEEEEcCCcEEEcCEEEEecChh
Q 017808 112 GLDIRLGHRVTKITRHY---IGVKVTVEGGKTFVADAVVVAVPLG 153 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~---~~v~V~~~~g~~~~ad~VI~t~p~~ 153 (365)
+++++++++|+.|.... +.+.|++.+|+++.+|+||+|+-..
T Consensus 70 ~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~ 114 (310)
T 1fl2_A 70 DVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAK 114 (310)
T ss_dssp CEEEECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEE
T ss_pred CCeEEccCEEEEEEecccCCceEEEEECCCCEEEeCEEEECcCCC
Confidence 45799999999998653 3688989899889999999998753
No 145
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=84.89 E-value=1.1 Score=39.50 Aligned_cols=50 Identities=8% Similarity=0.072 Sum_probs=36.1
Q ss_pred HHHHHHHh-ccCCeecCceeEEEEecCCeeEEEEcC-----CcEEEcCEEEEecCh
Q 017808 103 LPVINTLA-KGLDIRLGHRVTKITRHYIGVKVTVEG-----GKTFVADAVVVAVPL 152 (365)
Q Consensus 103 ~~L~~~L~-~~l~I~l~~~V~~I~~~~~~v~V~~~~-----g~~~~ad~VI~t~p~ 152 (365)
....+.|. .+++++++++|.+|..+++.+.|++.+ ++++.||.||+++..
T Consensus 193 ~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~ 248 (332)
T 3lzw_A 193 EHSVENLHASKVNVLTPFVPAELIGEDKIEQLVLEEVKGDRKEILEIDDLIVNYGF 248 (332)
T ss_dssp HHHHHHHHHSSCEEETTEEEEEEECSSSCCEEEEEETTSCCEEEEECSEEEECCCE
T ss_pred HHHHHHHhcCCeEEEeCceeeEEecCCceEEEEEEecCCCceEEEECCEEEEeecc
Confidence 34444453 367899999999999876655565544 457899999998874
No 146
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=84.60 E-value=1.3 Score=43.54 Aligned_cols=41 Identities=27% Similarity=0.163 Sum_probs=34.5
Q ss_pred cCCeecCceeEEEEecCCeeE-EEEcCCcEEEcCEEEEecChh
Q 017808 112 GLDIRLGHRVTKITRHYIGVK-VTVEGGKTFVADAVVVAVPLG 153 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~v~-V~~~~g~~~~ad~VI~t~p~~ 153 (365)
+++| ++++|+.|..++++|. |.+.+|.++.||+||+|+-..
T Consensus 138 GVeI-~~~~Vt~L~~e~g~V~GV~t~dG~~i~AdaVVLATG~~ 179 (637)
T 2zxi_A 138 NLYI-KQEEVVDIIVKNNQVVGVRTNLGVEYKTKAVVVTTGTF 179 (637)
T ss_dssp TEEE-EESCEEEEEESSSBEEEEEETTSCEEECSEEEECCTTC
T ss_pred CCEE-EEeEEEEEEecCCEEEEEEECCCcEEEeCEEEEccCCC
Confidence 4567 6789999998877764 889999999999999999753
No 147
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=84.37 E-value=1.3 Score=43.00 Aligned_cols=39 Identities=13% Similarity=0.301 Sum_probs=32.8
Q ss_pred cCCeecCceeEEEEecCCeeEEEEcCCcEEEcCEEEEecCh
Q 017808 112 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 152 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~v~V~~~~g~~~~ad~VI~t~p~ 152 (365)
+++|+++++|++|..++++ |++.+|+++.||.||+++..
T Consensus 242 GV~i~~~~~v~~i~~~~~~--v~~~~g~~i~~D~Vi~a~G~ 280 (588)
T 3ics_A 242 DVELVFEDGVDALEENGAV--VRLKSGSVIQTDMLILAIGV 280 (588)
T ss_dssp TCEEECSCCEEEEEGGGTE--EEETTSCEEECSEEEECSCE
T ss_pred CCEEEECCeEEEEecCCCE--EEECCCCEEEcCEEEEccCC
Confidence 6789999999999876554 56678889999999999863
No 148
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=84.25 E-value=1.3 Score=39.01 Aligned_cols=42 Identities=19% Similarity=0.259 Sum_probs=33.9
Q ss_pred HhCCCCCEEEeccccCCCCcchhHHHHHHHHHHHHHHHHHHHH
Q 017808 296 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVLE 338 (365)
Q Consensus 296 l~~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l~~ 338 (365)
+++.++++|-+||-+..+ ...++-|+..|+.||..|.+.|..
T Consensus 266 ~~Ts~pgIyA~GDv~~~~-~~~~~~A~~~G~~AA~~i~~~L~~ 307 (312)
T 4gcm_A 266 MTTSVPGIFAAGDVRDKG-LRQIVTATGDGSIAAQSAAEYIEH 307 (312)
T ss_dssp SBCSSTTEEECSTTBSCS-CCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccCCCCEEEEeecCCCc-chHHHHHHHHHHHHHHHHHHHHHh
Confidence 456788999999987643 236888999999999999877653
No 149
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=84.20 E-value=1.6 Score=41.24 Aligned_cols=41 Identities=15% Similarity=0.147 Sum_probs=33.4
Q ss_pred cCCeecCceeEEEEecCCe--eEEEEcC---C----cEEEcCEEEEecCh
Q 017808 112 GLDIRLGHRVTKITRHYIG--VKVTVEG---G----KTFVADAVVVAVPL 152 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~--v~V~~~~---g----~~~~ad~VI~t~p~ 152 (365)
+++|+++++|++|...+++ +.|++.+ | +++.||.||+++..
T Consensus 242 gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~ 291 (478)
T 3dk9_A 242 GVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGR 291 (478)
T ss_dssp TCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCE
T ss_pred CCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeecc
Confidence 6789999999999987665 6677765 2 57899999999874
No 150
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=83.44 E-value=1.8 Score=37.95 Aligned_cols=50 Identities=20% Similarity=0.322 Sum_probs=36.5
Q ss_pred HHHHHHHhc--cCCeecCceeEEEEecCCeeEEEEcC---Cc--EEEcCEEEEecCh
Q 017808 103 LPVINTLAK--GLDIRLGHRVTKITRHYIGVKVTVEG---GK--TFVADAVVVAVPL 152 (365)
Q Consensus 103 ~~L~~~L~~--~l~I~l~~~V~~I~~~~~~v~V~~~~---g~--~~~ad~VI~t~p~ 152 (365)
..+.+.+.+ +++++++++|++|..++....|++.+ |+ ++.+|.||+++..
T Consensus 193 ~~~~~~~~~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~ 249 (323)
T 3f8d_A 193 PIYVETVKKKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGF 249 (323)
T ss_dssp HHHHHHHHTCTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred HHHHHHHHhCCCcEEEeCCEEEEEeccCceeEEEEEECCCCceEEEEcCEEEEEECC
Confidence 345555543 66899999999999875544466554 75 7899999999874
No 151
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=83.25 E-value=2.1 Score=37.45 Aligned_cols=50 Identities=12% Similarity=0.162 Sum_probs=37.0
Q ss_pred HHHHHHHhc--cCCeecCceeEEEEecCCee-EEEEc---CCc--EEEcCEEEEecCh
Q 017808 103 LPVINTLAK--GLDIRLGHRVTKITRHYIGV-KVTVE---GGK--TFVADAVVVAVPL 152 (365)
Q Consensus 103 ~~L~~~L~~--~l~I~l~~~V~~I~~~~~~v-~V~~~---~g~--~~~ad~VI~t~p~ 152 (365)
..+.+.|.+ +++|+++++|++|..+++++ .|++. +|+ ++.||.||+++..
T Consensus 182 ~~~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 239 (311)
T 2q0l_A 182 PITLEHAKNNDKIEFLTPYVVEEIKGDASGVSSLSIKNTATNEKRELVVPGFFIFVGY 239 (311)
T ss_dssp HHHHHHHHTCTTEEEETTEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred HHHHHHHhhCCCeEEEeCCEEEEEECCCCcEeEEEEEecCCCceEEEecCEEEEEecC
Confidence 456667753 67899999999998875654 34443 665 6899999998863
No 152
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=83.24 E-value=1.6 Score=38.00 Aligned_cols=49 Identities=12% Similarity=0.072 Sum_probs=34.8
Q ss_pred HHHHHHhc--cCCeecCceeEEEEecCCee-EEEEc---------CC-----cEEEcCEEEEecCh
Q 017808 104 PVINTLAK--GLDIRLGHRVTKITRHYIGV-KVTVE---------GG-----KTFVADAVVVAVPL 152 (365)
Q Consensus 104 ~L~~~L~~--~l~I~l~~~V~~I~~~~~~v-~V~~~---------~g-----~~~~ad~VI~t~p~ 152 (365)
.|.+.+.+ +++|+++++|++|..+++++ .|.+. +| .++.||.||+|+-.
T Consensus 124 ~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~ 189 (284)
T 1rp0_A 124 TIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGH 189 (284)
T ss_dssp HHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCS
T ss_pred HHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEECCEEEECCCC
Confidence 44555543 56899999999999877765 24332 32 57899999998864
No 153
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=83.16 E-value=1.2 Score=39.43 Aligned_cols=40 Identities=30% Similarity=0.286 Sum_probs=34.2
Q ss_pred cCCeecCceeEEEEecCCeeEEEEcCCcEEEcCEEEEecChh
Q 017808 112 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLG 153 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~v~V~~~~g~~~~ad~VI~t~p~~ 153 (365)
++++++++ |..|...++++.|++ +|+++.+|+||+|+-..
T Consensus 84 gv~~~~~~-v~~i~~~~~~~~v~~-~~~~~~~~~vv~A~G~~ 123 (333)
T 1vdc_A 84 GTTIFTET-VTKVDFSSKPFKLFT-DSKAILADAVILAIGAV 123 (333)
T ss_dssp TCEEECCC-CCEEECSSSSEEEEC-SSEEEEEEEEEECCCEE
T ss_pred CCEEEEeE-EEEEEEcCCEEEEEE-CCcEEEcCEEEECCCCC
Confidence 56788887 999998888888888 78889999999998754
No 154
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=83.03 E-value=2 Score=40.75 Aligned_cols=46 Identities=20% Similarity=0.417 Sum_probs=34.3
Q ss_pred HHHHHhc-cCCeecCceeEEEEecCCee-EEEEcCCcEEEcCEEEEecCh
Q 017808 105 VINTLAK-GLDIRLGHRVTKITRHYIGV-KVTVEGGKTFVADAVVVAVPL 152 (365)
Q Consensus 105 L~~~L~~-~l~I~l~~~V~~I~~~~~~v-~V~~~~g~~~~ad~VI~t~p~ 152 (365)
+.+.|.+ +++|+++++|++|.. ++++ .|.+ +|+++.||.||+++..
T Consensus 242 l~~~l~~~GV~i~~~~~v~~i~~-~~~v~~v~~-~g~~i~~D~Vi~a~G~ 289 (490)
T 2bc0_A 242 MAKNMEEHGIQLAFGETVKEVAG-NGKVEKIIT-DKNEYDVDMVILAVGF 289 (490)
T ss_dssp HHHHHHTTTCEEEETCCEEEEEC-SSSCCEEEE-SSCEEECSEEEECCCE
T ss_pred HHHHHHhCCeEEEeCCEEEEEEc-CCcEEEEEE-CCcEEECCEEEECCCC
Confidence 3344433 678999999999986 4444 3555 7778999999999864
No 155
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=82.90 E-value=1.8 Score=40.49 Aligned_cols=49 Identities=18% Similarity=0.110 Sum_probs=36.2
Q ss_pred HHHHHHhcc--CCeecCceeEEEEec---CCe--eEEEEcCCc----EEEcCEEEEecCh
Q 017808 104 PVINTLAKG--LDIRLGHRVTKITRH---YIG--VKVTVEGGK----TFVADAVVVAVPL 152 (365)
Q Consensus 104 ~L~~~L~~~--l~I~l~~~V~~I~~~---~~~--v~V~~~~g~----~~~ad~VI~t~p~ 152 (365)
...+..++. ++|+++++|++|... ++. +.|++.+|+ ++.||+||+|+-.
T Consensus 131 ~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVlAtG~ 190 (463)
T 3s5w_A 131 DYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVVSPGG 190 (463)
T ss_dssp HHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEECCCC
T ss_pred HHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEECCCC
Confidence 333344443 479999999999986 333 478777775 8999999999874
No 156
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=82.71 E-value=2.7 Score=37.21 Aligned_cols=41 Identities=12% Similarity=0.032 Sum_probs=31.1
Q ss_pred cCCeecCceeEEEEecCCeeEEEEc---CC--cEEEcCEEEEecCh
Q 017808 112 GLDIRLGHRVTKITRHYIGVKVTVE---GG--KTFVADAVVVAVPL 152 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~v~V~~~---~g--~~~~ad~VI~t~p~ 152 (365)
++++++++.|.+|..+++...|++. +| +++.+|.||+++..
T Consensus 205 gv~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~ 250 (335)
T 2zbw_A 205 RLEVLTPYELRRVEGDERVRWAVVFHNQTQEELALEVDAVLILAGY 250 (335)
T ss_dssp SSEEETTEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred CeEEecCCcceeEccCCCeeEEEEEECCCCceEEEecCEEEEeecC
Confidence 6789999999999985432235444 67 57899999999874
No 157
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=82.13 E-value=1.5 Score=42.49 Aligned_cols=43 Identities=23% Similarity=0.031 Sum_probs=34.5
Q ss_pred cCCeecCceeEEEEecCCeeE-EEEcC---C--cEEEcCEEEEecChhh
Q 017808 112 GLDIRLGHRVTKITRHYIGVK-VTVEG---G--KTFVADAVVVAVPLGV 154 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~v~-V~~~~---g--~~~~ad~VI~t~p~~~ 154 (365)
+++|+++++|++|..++++|. |++.+ | .++.||.||.|+-+..
T Consensus 184 G~~i~~~~~V~~l~~~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s 232 (561)
T 3da1_A 184 GAVALNYMKVESFIYDQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWV 232 (561)
T ss_dssp TCEEEESEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCGGGH
T ss_pred CCEEEcCCEEEEEEEcCCeEEEEEEEEcCCCceEEEECCEEEECCCcch
Confidence 678999999999999888753 66543 3 4789999999998754
No 158
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=82.03 E-value=1.4 Score=41.51 Aligned_cols=39 Identities=31% Similarity=0.357 Sum_probs=31.8
Q ss_pred cCCeecCceeEEEEecCCeeEEEEcCC--cEEEcCEEEEecCh
Q 017808 112 GLDIRLGHRVTKITRHYIGVKVTVEGG--KTFVADAVVVAVPL 152 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~v~V~~~~g--~~~~ad~VI~t~p~ 152 (365)
+++|+++++|++|.. + ++.|++.+| +++.||.||+++..
T Consensus 226 gv~i~~~~~v~~i~~-~-~v~v~~~~G~~~~i~~D~vv~a~G~ 266 (458)
T 1lvl_A 226 GIALHLGHSVEGYEN-G-CLLANDGKGGQLRLEADRVLVAVGR 266 (458)
T ss_dssp TCEEETTCEEEEEET-T-EEEEECSSSCCCEECCSCEEECCCE
T ss_pred CCEEEECCEEEEEEe-C-CEEEEECCCceEEEECCEEEECcCC
Confidence 678999999999987 4 376765456 68999999999875
No 159
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=81.87 E-value=2.3 Score=40.71 Aligned_cols=42 Identities=12% Similarity=0.116 Sum_probs=34.2
Q ss_pred cCCeecCceeEEEEecCCe--eEEEEcCCcEEEcCEEEEecChhh
Q 017808 112 GLDIRLGHRVTKITRHYIG--VKVTVEGGKTFVADAVVVAVPLGV 154 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~--v~V~~~~g~~~~ad~VI~t~p~~~ 154 (365)
+++|+++ .|++|..++++ +.|++.+|+++.||.||.|.-..-
T Consensus 190 Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S 233 (526)
T 2pyx_A 190 GVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKS 233 (526)
T ss_dssp CCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGC
T ss_pred CCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcch
Confidence 6789999 59999887655 367888877899999999997653
No 160
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=81.57 E-value=1.7 Score=40.66 Aligned_cols=48 Identities=23% Similarity=0.296 Sum_probs=35.1
Q ss_pred HHHHHHhccCCeecCceeEEEEecCCeeEEEEcCCcEEEcCEEEEecCh
Q 017808 104 PVINTLAKGLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 152 (365)
Q Consensus 104 ~L~~~L~~~l~I~l~~~V~~I~~~~~~v~V~~~~g~~~~ad~VI~t~p~ 152 (365)
.+.+.|.+.+++++++.|.+|..++ ++.+...+|+++.||.||+++..
T Consensus 195 ~l~~~l~~~v~i~~~~~v~~i~~~~-~v~~v~~~g~~i~~D~Vv~a~G~ 242 (449)
T 3kd9_A 195 ILEEKLKKHVNLRLQEITMKIEGEE-RVEKVVTDAGEYKAELVILATGI 242 (449)
T ss_dssp HHHHHHTTTSEEEESCCEEEEECSS-SCCEEEETTEEEECSEEEECSCE
T ss_pred HHHHHHHhCcEEEeCCeEEEEeccC-cEEEEEeCCCEEECCEEEEeeCC
Confidence 3444454457789999999998665 55433457778999999999864
No 161
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=81.43 E-value=1.5 Score=38.39 Aligned_cols=42 Identities=26% Similarity=0.374 Sum_probs=33.3
Q ss_pred HhCCCCCEEEeccccCCCCcchhHHHHHHHHHHHHHHHHHHHH
Q 017808 296 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVLE 338 (365)
Q Consensus 296 l~~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l~~ 338 (365)
+++.++++|-|||-+...+ ..+.-|+.+|..||..+.+.|.+
T Consensus 272 ~~Ts~pgIyA~GDv~~~~~-~~~~~A~~~G~~AA~~~~~yL~~ 313 (314)
T 4a5l_A 272 PKTSVDGVFACGDVCDRVY-RQAIVAAGSGCMAALSCEKWLQT 313 (314)
T ss_dssp TBCSSTTEEECSTTTCSSC-CCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CccCCCCEEEEEeccCCcc-hHHHHHHHHHHHHHHHHHHHHhc
Confidence 4677899999999876532 25677899999999999887753
No 162
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=81.36 E-value=1.6 Score=39.32 Aligned_cols=40 Identities=10% Similarity=0.227 Sum_probs=33.5
Q ss_pred CCeecCceeEEEEecCCeeEEEEcCCcEEE-cCEEEEecCh
Q 017808 113 LDIRLGHRVTKITRHYIGVKVTVEGGKTFV-ADAVVVAVPL 152 (365)
Q Consensus 113 l~I~l~~~V~~I~~~~~~v~V~~~~g~~~~-ad~VI~t~p~ 152 (365)
++|+++++|.+|...++++.|++.+|+++. +|.||+++..
T Consensus 230 v~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~d~vi~a~G~ 270 (369)
T 3d1c_A 230 IEMNVHYTVKDIDFNNGQYHISFDSGQSVHTPHEPILATGF 270 (369)
T ss_dssp EEEECSCCEEEEEEETTEEEEEESSSCCEEESSCCEECCCB
T ss_pred EEEecCcEEEEEEecCCceEEEecCCeEeccCCceEEeecc
Confidence 889999999999877777888888997665 5999998764
No 163
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=81.12 E-value=2.3 Score=40.87 Aligned_cols=42 Identities=17% Similarity=0.258 Sum_probs=34.9
Q ss_pred cCCeecCceeEEEEecCCe--eEEEEcCCcEEEcCEEEEecChhh
Q 017808 112 GLDIRLGHRVTKITRHYIG--VKVTVEGGKTFVADAVVVAVPLGV 154 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~--v~V~~~~g~~~~ad~VI~t~p~~~ 154 (365)
+++++.+ +|++|..++++ +.|++.+|+++.||.||.|.-..-
T Consensus 179 gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s 222 (538)
T 2aqj_A 179 GVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRG 222 (538)
T ss_dssp TCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGC
T ss_pred CCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCch
Confidence 6789999 89999986554 568888898899999999997653
No 164
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=81.11 E-value=2.1 Score=39.93 Aligned_cols=39 Identities=33% Similarity=0.394 Sum_probs=31.4
Q ss_pred cCCeecCceeEEEEecCCee-EEEEcCCcEEEcCEEEEecCh
Q 017808 112 GLDIRLGHRVTKITRHYIGV-KVTVEGGKTFVADAVVVAVPL 152 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~v-~V~~~~g~~~~ad~VI~t~p~ 152 (365)
+++|+++++|++|..+ +++ .|++ +|+++.||.||+++..
T Consensus 205 gv~i~~~~~v~~i~~~-~~v~~v~~-~~~~i~~d~vi~a~G~ 244 (447)
T 1nhp_A 205 NITIATGETVERYEGD-GRVQKVVT-DKNAYDADLVVVAVGV 244 (447)
T ss_dssp TEEEEESCCEEEEECS-SBCCEEEE-SSCEEECSEEEECSCE
T ss_pred CCEEEcCCEEEEEEcc-CcEEEEEE-CCCEEECCEEEECcCC
Confidence 5689999999999876 444 4666 5668999999999874
No 165
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=81.10 E-value=1.7 Score=42.86 Aligned_cols=41 Identities=27% Similarity=0.207 Sum_probs=34.2
Q ss_pred cCCeecCceeEEEEecCCee-EEEEcCCcEEEcCEEEEecChh
Q 017808 112 GLDIRLGHRVTKITRHYIGV-KVTVEGGKTFVADAVVVAVPLG 153 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~v-~V~~~~g~~~~ad~VI~t~p~~ 153 (365)
+++| ++++|+.|..++++| .|.+.+|.++.||.||+|+-..
T Consensus 139 GV~I-~~~~V~~L~~e~g~V~GV~t~dG~~I~Ad~VVLATGt~ 180 (651)
T 3ces_A 139 NLMI-FQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTF 180 (651)
T ss_dssp TEEE-EECCEEEEEESSSBEEEEEETTSEEEEEEEEEECCSTT
T ss_pred CCEE-EEEEEEEEEecCCEEEEEEECCCCEEECCEEEEcCCCC
Confidence 4567 678999998877776 5888899889999999999864
No 166
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=80.93 E-value=3 Score=36.65 Aligned_cols=49 Identities=20% Similarity=0.236 Sum_probs=34.6
Q ss_pred HHHHHHHhc-cCCeecCceeEEEEecCCee-EEEEc---CCc--EEEcCEEEEecC
Q 017808 103 LPVINTLAK-GLDIRLGHRVTKITRHYIGV-KVTVE---GGK--TFVADAVVVAVP 151 (365)
Q Consensus 103 ~~L~~~L~~-~l~I~l~~~V~~I~~~~~~v-~V~~~---~g~--~~~ad~VI~t~p 151 (365)
..+.+.|.+ +++|+++++|++|..+++++ .|+.. +|+ ++.||.||+++.
T Consensus 194 ~~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G 249 (319)
T 3cty_A 194 NAYVQEIKKRNIPYIMNAQVTEIVGDGKKVTGVKYKDRTTGEEKLIETDGVFIYVG 249 (319)
T ss_dssp HHHHHHHHHTTCCEECSEEEEEEEESSSSEEEEEEEETTTCCEEEECCSEEEECCC
T ss_pred HHHHHHHhcCCcEEEcCCeEEEEecCCceEEEEEEEEcCCCceEEEecCEEEEeeC
Confidence 345555543 77899999999998776533 24433 664 689999999885
No 167
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=80.66 E-value=1.8 Score=42.60 Aligned_cols=41 Identities=24% Similarity=0.307 Sum_probs=34.1
Q ss_pred cCCeecCceeEEEEecCCeeE-EEEcCCcEEEcCEEEEecChh
Q 017808 112 GLDIRLGHRVTKITRHYIGVK-VTVEGGKTFVADAVVVAVPLG 153 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~v~-V~~~~g~~~~ad~VI~t~p~~ 153 (365)
+++| ++..|+.|..++++|. |.+.+|+++.||.||+|+-..
T Consensus 132 GV~I-~~~~V~~L~~d~g~V~GV~t~~G~~i~Ad~VVLATG~~ 173 (641)
T 3cp8_A 132 NIDL-LQDTVIGVSANSGKFSSVTVRSGRAIQAKAAILACGTF 173 (641)
T ss_dssp TEEE-EECCEEEEEEETTEEEEEEETTSCEEEEEEEEECCTTC
T ss_pred CCEE-EeeEEEEEEecCCEEEEEEECCCcEEEeCEEEECcCCC
Confidence 4567 4668999988888876 889999999999999998754
No 168
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=80.43 E-value=2.1 Score=37.36 Aligned_cols=38 Identities=29% Similarity=0.295 Sum_probs=30.4
Q ss_pred CCCEEEeccccCCCCcchhHHHHHHHHHHHHHHHHHHHH
Q 017808 300 VDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVLE 338 (365)
Q Consensus 300 ~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l~~ 338 (365)
.+++|.+||..... +..+..|+..|..||..|.+.+.+
T Consensus 276 ~~~v~a~GD~~~~~-~~~~~~A~~~g~~aa~~i~~~l~~ 313 (315)
T 3r9u_A 276 VAGLFAAGDLRKDA-PKQVICAAGDGAVAALSAMAYIES 313 (315)
T ss_dssp STTEEECGGGBTTC-CCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEeecccCCc-hhhhhhHHhhHHHHHHHHHHHHHh
Confidence 46899999987532 457888999999999999888754
No 169
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=80.32 E-value=3.2 Score=36.57 Aligned_cols=49 Identities=12% Similarity=0.083 Sum_probs=34.8
Q ss_pred HHHHHHHhc--cCCeecCceeEEEEecCCeeEEEEc---CCc--EEEcCEEEEecC
Q 017808 103 LPVINTLAK--GLDIRLGHRVTKITRHYIGVKVTVE---GGK--TFVADAVVVAVP 151 (365)
Q Consensus 103 ~~L~~~L~~--~l~I~l~~~V~~I~~~~~~v~V~~~---~g~--~~~ad~VI~t~p 151 (365)
..+.+.+.+ +++|+++++|++|..++....|++. +|+ ++.||.||+++.
T Consensus 191 ~~~~~~l~~~~gv~i~~~~~v~~i~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G 246 (325)
T 2q7v_A 191 KVAQARAFANPKMKFIWDTAVEEIQGADSVSGVKLRNLKTGEVSELATDGVFIFIG 246 (325)
T ss_dssp HHHHHHHHTCTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECSC
T ss_pred hHHHHHHHhcCCceEecCCceEEEccCCcEEEEEEEECCCCcEEEEEcCEEEEccC
Confidence 455666643 6789999999999875432234443 664 689999999885
No 170
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=80.17 E-value=1.9 Score=37.70 Aligned_cols=38 Identities=26% Similarity=0.236 Sum_probs=28.9
Q ss_pred cCCeecCceeEEEEecC--CeeEE-EEcCCcEEEcCEEEEecCh
Q 017808 112 GLDIRLGHRVTKITRHY--IGVKV-TVEGGKTFVADAVVVAVPL 152 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~--~~v~V-~~~~g~~~~ad~VI~t~p~ 152 (365)
+++++++ +|.+| .++ +.+.| ...++ ++.+|+||+++-.
T Consensus 76 ~v~~~~~-~v~~i-~~~~~~~~~v~~~~~~-~~~~d~lvlAtG~ 116 (315)
T 3r9u_A 76 GLKHEMV-GVEQI-LKNSDGSFTIKLEGGK-TELAKAVIVCTGS 116 (315)
T ss_dssp CCEEECC-CEEEE-EECTTSCEEEEETTSC-EEEEEEEEECCCE
T ss_pred CcEEEEE-EEEEE-ecCCCCcEEEEEecCC-EEEeCEEEEeeCC
Confidence 4578888 89999 766 67874 23344 8999999999875
No 171
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=80.10 E-value=2.2 Score=40.84 Aligned_cols=43 Identities=21% Similarity=0.265 Sum_probs=35.1
Q ss_pred HhCCCCCEEEeccccCCCCcchhHHHHHHHHHHHHHHHHHHHHH
Q 017808 296 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVLER 339 (365)
Q Consensus 296 l~~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l~~~ 339 (365)
+++.++++|.+||.+...+ ..+..|+..|..||..|.+.|..+
T Consensus 476 ~~ts~p~VfA~GD~~~~~~-~~~~~A~~~g~~aa~~i~~~L~~~ 518 (521)
T 1hyu_A 476 CETSVKGVFAAGDCTTVPY-KQIIIATGEGAKASLSAFDYLIRT 518 (521)
T ss_dssp CBCSSTTEEECSTTBCCSS-CCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCEEEeecccCCCc-ceeeehHHhHHHHHHHHHHHHHhh
Confidence 3456789999999987643 478889999999999999888654
No 172
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=79.29 E-value=2.1 Score=36.99 Aligned_cols=39 Identities=26% Similarity=0.389 Sum_probs=33.1
Q ss_pred hCCCCCEEEeccccCCCCcchhHHHHHHHHHHHHHHHHHHH
Q 017808 297 RIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVL 337 (365)
Q Consensus 297 ~~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l~ 337 (365)
++..+++|.+||.+.. +..++.|+..|..||..|.+.+.
T Consensus 254 ~t~~~~vya~GD~~~~--~~~~~~A~~~g~~aa~~i~~~l~ 292 (297)
T 3fbs_A 254 QTTARGIFACGDVARP--AGSVALAVGDGAMAGAAAHRSIL 292 (297)
T ss_dssp BCSSTTEEECSGGGCT--TCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCEEEEeecCCc--hHHHHHHHHhHHHHHHHHHHHHh
Confidence 3456899999999874 46899999999999999998875
No 173
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=78.86 E-value=1.5 Score=36.89 Aligned_cols=35 Identities=17% Similarity=0.183 Sum_probs=30.1
Q ss_pred CCCCEEEeccccCCCCcchhHHHHHHHHHHHHHHHHHH
Q 017808 299 PVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRV 336 (365)
Q Consensus 299 p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l 336 (365)
.+++||.+|+.. . .|....|+.+|+.+|+.|++.+
T Consensus 197 ~~p~iya~G~~a-~--~g~~~~~~~~g~~~a~~i~~~l 231 (232)
T 2cul_A 197 RLEGLYAVGLCV-R--EGDYARMSEEGKRLAEHLLHEL 231 (232)
T ss_dssp TSBSEEECGGGT-S--CCCHHHHHHHHHHHHHHHHHHC
T ss_pred ccccceeeeecc-c--CccHHHHHHHHHHHHHHHHhhc
Confidence 578999999999 3 4588889999999999998764
No 174
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=78.85 E-value=2.8 Score=37.02 Aligned_cols=40 Identities=23% Similarity=0.276 Sum_probs=34.4
Q ss_pred cCCeecCceeEEEEecCCeeEEEE---cCCcEEEcCEEEEecCh
Q 017808 112 GLDIRLGHRVTKITRHYIGVKVTV---EGGKTFVADAVVVAVPL 152 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~v~V~~---~~g~~~~ad~VI~t~p~ 152 (365)
++++++++ |.+|...++.+.+++ .++.++.+|+||+|+-.
T Consensus 98 gv~i~~~~-v~~i~~~~~~~~v~~~~~~~~~~~~~d~vvlAtG~ 140 (338)
T 3itj_A 98 GTEIITET-VSKVDLSSKPFKLWTEFNEDAEPVTTDAIILATGA 140 (338)
T ss_dssp TCEEECSC-EEEEECSSSSEEEEETTCSSSCCEEEEEEEECCCE
T ss_pred CCEEEEeE-EEEEEEcCCEEEEEEEecCCCcEEEeCEEEECcCC
Confidence 56799998 999999888898887 36778999999999875
No 175
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=78.45 E-value=3 Score=37.03 Aligned_cols=42 Identities=21% Similarity=0.217 Sum_probs=34.2
Q ss_pred hCCCCCEEEeccccCCCCcchhHHHHHHHHHHHHHHHHHHHHH
Q 017808 297 RIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVLER 339 (365)
Q Consensus 297 ~~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l~~~ 339 (365)
.+..+++|.+||.+... ......|+..|..||..|.+.+.+.
T Consensus 277 ~t~~~~iya~GD~~~~~-~~~~~~A~~~g~~aA~~i~~~l~~~ 318 (335)
T 2a87_A 277 STSLPGVFAAGDLVDRT-YRQAVTAAGSGCAAAIDAERWLAEH 318 (335)
T ss_dssp BCSSTTEEECGGGTCCS-CCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCEEEeeecCCcc-HHHHHHHHHhHHHHHHHHHHHhhcC
Confidence 45578999999998763 3467889999999999999888654
No 176
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=78.16 E-value=1.6 Score=41.56 Aligned_cols=43 Identities=16% Similarity=0.261 Sum_probs=33.9
Q ss_pred cCCeecCceeEEEEec---CCeeEEEE--c-CC--cEEEcCEEEEecChhh
Q 017808 112 GLDIRLGHRVTKITRH---YIGVKVTV--E-GG--KTFVADAVVVAVPLGV 154 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~---~~~v~V~~--~-~g--~~~~ad~VI~t~p~~~ 154 (365)
+++|+++++|++|..+ ++++.|++ . +| .++.||.||.|+-..-
T Consensus 180 gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S 230 (497)
T 2bry_A 180 GVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKF 230 (497)
T ss_dssp TCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTC
T ss_pred CCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCc
Confidence 5789999999999874 34577776 4 66 5789999999997643
No 177
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=77.41 E-value=2.8 Score=37.61 Aligned_cols=41 Identities=22% Similarity=0.319 Sum_probs=31.7
Q ss_pred cCCeecCceeEEEEecCCee-EEEE--cCC--cEEEcCEEEEecCh
Q 017808 112 GLDIRLGHRVTKITRHYIGV-KVTV--EGG--KTFVADAVVVAVPL 152 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~v-~V~~--~~g--~~~~ad~VI~t~p~ 152 (365)
+++|+++++|++|..+++++ .|++ .+| +++.+|.||+++..
T Consensus 216 gv~i~~~~~v~~i~~~~~~v~~v~~~~~~g~~~~i~~D~vi~a~G~ 261 (360)
T 3ab1_A 216 TIDVYLETEVASIEESNGVLTRVHLRSSDGSKWTVEADRLLILIGF 261 (360)
T ss_dssp SEEEESSEEEEEEEEETTEEEEEEEEETTCCEEEEECSEEEECCCB
T ss_pred ceEEEcCcCHHHhccCCCceEEEEEEecCCCeEEEeCCEEEECCCC
Confidence 36799999999999876653 3443 477 57899999999873
No 178
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=77.34 E-value=2.9 Score=40.57 Aligned_cols=43 Identities=12% Similarity=-0.024 Sum_probs=33.5
Q ss_pred cCCeecCceeEEEEecCCee-EEEEc---CCc--EEEcCEEEEecChhh
Q 017808 112 GLDIRLGHRVTKITRHYIGV-KVTVE---GGK--TFVADAVVVAVPLGV 154 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~v-~V~~~---~g~--~~~ad~VI~t~p~~~ 154 (365)
+++|+++++|++|..++++| .|++. +|+ ++.||.||.|+-+..
T Consensus 202 Ga~i~~~t~V~~l~~~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws 250 (571)
T 2rgh_A 202 GAYLVSKMKAVGFLYEGDQIVGVKARDLLTDEVIEIKAKLVINTSGPWV 250 (571)
T ss_dssp TCEEESSEEEEEEEEETTEEEEEEEEETTTCCEEEEEBSCEEECCGGGH
T ss_pred CCeEEeccEEEEEEEeCCEEEEEEEEEcCCCCEEEEEcCEEEECCChhH
Confidence 67899999999999887764 35532 343 689999999998764
No 179
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=77.31 E-value=3.9 Score=38.55 Aligned_cols=39 Identities=26% Similarity=0.329 Sum_probs=30.8
Q ss_pred cCCeecCceeEEEEecCCee-EEEEcCCcEEEcCEEEEecCh
Q 017808 112 GLDIRLGHRVTKITRHYIGV-KVTVEGGKTFVADAVVVAVPL 152 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~v-~V~~~~g~~~~ad~VI~t~p~ 152 (365)
+++|+++++|++|..+ +++ .|.+. +.++.||.||+++..
T Consensus 241 Gv~i~~~~~v~~i~~~-~~v~~v~~~-~~~i~~D~vi~a~G~ 280 (480)
T 3cgb_A 241 HIEILTNENVKAFKGN-ERVEAVETD-KGTYKADLVLVSVGV 280 (480)
T ss_dssp TCEEECSCCEEEEEES-SBEEEEEET-TEEEECSEEEECSCE
T ss_pred CcEEEcCCEEEEEEcC-CcEEEEEEC-CCEEEcCEEEECcCC
Confidence 6789999999999875 344 46554 458999999999864
No 180
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=76.67 E-value=3.8 Score=38.76 Aligned_cols=41 Identities=29% Similarity=0.239 Sum_probs=31.2
Q ss_pred cCCeecCceeEEEEecC-CeeEEEEcC---Cc--EEEcCEEEEecCh
Q 017808 112 GLDIRLGHRVTKITRHY-IGVKVTVEG---GK--TFVADAVVVAVPL 152 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~-~~v~V~~~~---g~--~~~ad~VI~t~p~ 152 (365)
+++|++++.|++|...+ +.+.|++.+ |+ ++.||.||+++..
T Consensus 239 gv~~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~ 285 (488)
T 3dgz_A 239 GTQFLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIGR 285 (488)
T ss_dssp TCEEEETEEEEEEEECTTSCEEEEEEETTTTEEEEEEESEEEECSCE
T ss_pred CCEEEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECCEEEEcccC
Confidence 57899999999998754 446666544 54 4789999999874
No 181
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=76.21 E-value=3.7 Score=35.95 Aligned_cols=39 Identities=15% Similarity=0.301 Sum_probs=33.0
Q ss_pred cCCeecCceeEEEEecCCeeEEEEcCCcEEEcCEEEEecCh
Q 017808 112 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 152 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~v~V~~~~g~~~~ad~VI~t~p~ 152 (365)
++++++++ |+.|...++.+.| +.+|.++.+|+||+|+-.
T Consensus 76 ~~~~~~~~-v~~i~~~~~~~~v-~~~~~~~~~~~lv~AtG~ 114 (320)
T 1trb_A 76 ETEIIFDH-INKVDLQNRPFRL-NGDNGEYTCDALIIATGA 114 (320)
T ss_dssp TCEEECCC-EEEEECSSSSEEE-EESSCEEEEEEEEECCCE
T ss_pred CCEEEEee-eeEEEecCCEEEE-EeCCCEEEcCEEEECCCC
Confidence 56788886 9999988888888 667888999999999875
No 182
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=76.18 E-value=2.2 Score=37.42 Aligned_cols=42 Identities=29% Similarity=0.255 Sum_probs=33.1
Q ss_pred HhCCCCCEEEeccccCCCCcchhHHHHHHHHHHHHHHHHHHHH
Q 017808 296 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVLE 338 (365)
Q Consensus 296 l~~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l~~ 338 (365)
+++.++++|-|||-+...+ ..+.-|+.+|..||..|.+.|.+
T Consensus 260 ~~Ts~p~IyA~GDv~~~~~-~~~~~A~~~G~~AA~~i~~~L~~ 301 (304)
T 4fk1_A 260 GRTSEKNIYLAGETTTQGP-SSLIIAASQGNKAAIAINSDITD 301 (304)
T ss_dssp CBCSSTTEEECSHHHHTSC-CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccCCCCEEEEeccCCCcc-hHHHHHHHHHHHHHHHHHHHHhh
Confidence 4566789999999876432 24667899999999999988864
No 183
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=76.16 E-value=3.8 Score=36.09 Aligned_cols=42 Identities=17% Similarity=0.177 Sum_probs=34.1
Q ss_pred HhCCCCCEEEeccccCCCCcchhHHHHHHHHHHHHHHHHHHHH
Q 017808 296 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVLE 338 (365)
Q Consensus 296 l~~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l~~ 338 (365)
+++..+++|.+||.+... +...+.|+..|..||..|...+.+
T Consensus 272 ~~t~~~~vya~GD~~~~~-~~~~~~A~~~g~~aa~~i~~~l~~ 313 (325)
T 2q7v_A 272 IYTNIPMLFAAGDVSDYI-YRQLATSVGAGTRAAMMTERQLAA 313 (325)
T ss_dssp TBCSSTTEEECSTTTCSS-CCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccCCCCEEEeecccCcc-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345678999999998642 357888999999999999988764
No 184
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=75.96 E-value=2.9 Score=36.97 Aligned_cols=42 Identities=29% Similarity=0.264 Sum_probs=33.9
Q ss_pred hCCCCCEEEeccccCCCCcchhHHHHHHHHHHHHHHHHHHHHH
Q 017808 297 RIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVLER 339 (365)
Q Consensus 297 ~~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l~~~ 339 (365)
.+..+++|.+||..... ......|+..|..||..|.+.+.++
T Consensus 284 ~t~~~~vya~GD~~~~~-~~~~~~A~~~g~~aa~~i~~~l~~~ 325 (333)
T 1vdc_A 284 QTSVPGVFAAGDVQDKK-YRQAITAAGTGCMAALDAEHYLQEI 325 (333)
T ss_dssp BCSSTTEEECGGGGCSS-CCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred ccCCCCEEEeeeccCCC-chhHHHHHHhHHHHHHHHHHHHHhc
Confidence 34568999999998753 3467889999999999999888644
No 185
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=75.52 E-value=3.3 Score=38.94 Aligned_cols=42 Identities=24% Similarity=0.176 Sum_probs=34.8
Q ss_pred HhCCCCCEEEeccccCCCCcchhHHHHHHHHHHHHHHHHHHHHH
Q 017808 296 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVLER 339 (365)
Q Consensus 296 l~~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l~~~ 339 (365)
+++..+++|.+||.... +..+..|+..|+.||..|...|..+
T Consensus 405 ~~Ts~~~VfA~GD~~~g--~~~v~~A~~~G~~aA~~i~~~L~~~ 446 (456)
T 2vdc_G 405 KMTNMDGVFAAGDIVRG--ASLVVWAIRDGRDAAEGIHAYAKAK 446 (456)
T ss_dssp CBCSSTTEEECGGGGSS--CCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCCCCEEEeccccCC--chHHHHHHHHHHHHHHHHHHHhhcC
Confidence 34557899999998765 4689999999999999999988654
No 186
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=75.50 E-value=3.7 Score=39.03 Aligned_cols=42 Identities=17% Similarity=0.135 Sum_probs=32.6
Q ss_pred hccC--CeecCceeEEEEecCC--------eeEEEEcCC-----cEEEcCEEEEecC
Q 017808 110 AKGL--DIRLGHRVTKITRHYI--------GVKVTVEGG-----KTFVADAVVVAVP 151 (365)
Q Consensus 110 ~~~l--~I~l~~~V~~I~~~~~--------~v~V~~~~g-----~~~~ad~VI~t~p 151 (365)
++.+ .|++|++|++|.+.++ .|+|++.++ +++.|++||+++.
T Consensus 155 A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG 211 (501)
T 4b63_A 155 AQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIG 211 (501)
T ss_dssp HHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCC
T ss_pred HHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECcC
Confidence 4555 4999999999987542 378887654 3689999999997
No 187
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=74.89 E-value=3.4 Score=36.03 Aligned_cols=41 Identities=20% Similarity=0.193 Sum_probs=33.4
Q ss_pred hCCCCCEEEeccccCCCCcchhHHHHHHHHHHHHHHHHHHHH
Q 017808 297 RIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVLE 338 (365)
Q Consensus 297 ~~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l~~ 338 (365)
++..+++|.+||.+... ...+..|+..|..||..|.+.+..
T Consensus 266 ~t~~~~vya~GD~~~~~-~~~~~~A~~~g~~aa~~i~~~l~~ 306 (310)
T 1fl2_A 266 ETNVKGVFAAGDCTTVP-YKQIIIATGEGAKASLSAFDYLIR 306 (310)
T ss_dssp BCSSTTEEECSTTBSCS-SCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCEEEeecccCCc-chhhhhhHhhHHHHHHHHHHHHHH
Confidence 45578999999998763 246788999999999999988754
No 188
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=74.88 E-value=5.6 Score=38.64 Aligned_cols=36 Identities=19% Similarity=0.230 Sum_probs=29.8
Q ss_pred CCEEEeccccCC---CCcchhHHHHHHHHHHHHHHHHHH
Q 017808 301 DNLFFAGEATSM---SYPGSVHGAFSTGLMAAEDCRMRV 336 (365)
Q Consensus 301 ~~l~~aG~~~~~---~~~g~v~gA~~SG~~aA~~i~~~l 336 (365)
+|++++||+.+. ..+.+++-|+.+|..+|+.|...+
T Consensus 347 ~rv~LvGDAAh~~~P~~GqG~~~Ai~da~~LA~~L~~~~ 385 (584)
T 2gmh_A 347 PGGLLIGCSPGFMNVPKIKGTHTAMKSGTLAAESIFNQL 385 (584)
T ss_dssp TTEEECTTTTCCCBTTTTBCHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEcccccccCccccccHHHHHHHHHHHHHHHHHHH
Confidence 689999999764 234589999999999999988765
No 189
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=74.78 E-value=3.2 Score=39.51 Aligned_cols=46 Identities=20% Similarity=0.270 Sum_probs=32.2
Q ss_pred HHHHhc-cCCeecCceeEEEEecCCeeEEEEcCC----cEEEcCEEEEecC
Q 017808 106 INTLAK-GLDIRLGHRVTKITRHYIGVKVTVEGG----KTFVADAVVVAVP 151 (365)
Q Consensus 106 ~~~L~~-~l~I~l~~~V~~I~~~~~~v~V~~~~g----~~~~ad~VI~t~p 151 (365)
.+.|.+ +++|++|++|++|+.++-.+.+...|| +++.||.||.|+.
T Consensus 279 ~~~L~~~GV~v~~~~~v~~v~~~~~~~~~~~~dg~~~~~~i~ad~viwa~G 329 (502)
T 4g6h_A 279 QSHLENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATG 329 (502)
T ss_dssp HHHHHHTTCEEETTEEEEEECSSEEEEEEECTTSCEEEEEEECSEEEECCC
T ss_pred HHHHHhcceeeecCceEEEEeCCceEEEEEecCcccceeeeccCEEEEccC
Confidence 344433 689999999999974332233455666 3689999999875
No 190
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=74.12 E-value=2.2 Score=37.91 Aligned_cols=42 Identities=12% Similarity=0.177 Sum_probs=32.6
Q ss_pred HhCCCCCEEEec--cccCCCCcchhHHHHHHHHHHHHHHHHHHHH
Q 017808 296 LRIPVDNLFFAG--EATSMSYPGSVHGAFSTGLMAAEDCRMRVLE 338 (365)
Q Consensus 296 l~~p~~~l~~aG--~~~~~~~~g~v~gA~~SG~~aA~~i~~~l~~ 338 (365)
+.+..+++|.+| |.+.+ ....+.+|+..|..+|..|.+.|.+
T Consensus 310 ~~t~~~~vya~Gd~d~~~~-~~~~~~~A~~~g~~~a~~i~~~l~g 353 (357)
T 4a9w_A 310 RALAVPSVWLLGYGDWNGM-ASATLIGVTRYAREAVRQVTAYCAD 353 (357)
T ss_dssp BBSSCTTEEECSSCGGGST-TCSSTTTHHHHHHHHHHHHHHHTC-
T ss_pred cCCCCCCeEEecccccccc-chhhhhhhHHHHHHHHHHHHHHHHh
Confidence 345678999999 55553 2468889999999999999987753
No 191
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=73.92 E-value=5.2 Score=38.91 Aligned_cols=42 Identities=24% Similarity=0.131 Sum_probs=31.5
Q ss_pred cCCeecCceeEEEEec-CCeeE-EE--E-cCCc--EEEcCEEEEecChh
Q 017808 112 GLDIRLGHRVTKITRH-YIGVK-VT--V-EGGK--TFVADAVVVAVPLG 153 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~-~~~v~-V~--~-~~g~--~~~ad~VI~t~p~~ 153 (365)
+++|+++++|++|..+ +++|. |. . .+|+ ++.|++||+|+-..
T Consensus 157 gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~ 205 (588)
T 2wdq_A 157 HTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGA 205 (588)
T ss_dssp TCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCC
T ss_pred CCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCC
Confidence 6789999999999985 55442 33 2 4665 58999999999753
No 192
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=73.39 E-value=2.9 Score=36.75 Aligned_cols=41 Identities=24% Similarity=0.246 Sum_probs=33.2
Q ss_pred HhCCCCCEEEeccccCCCCcchhHHHHHHHHHHHHHHHHHHH
Q 017808 296 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVL 337 (365)
Q Consensus 296 l~~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l~ 337 (365)
+++..+++|.+||..... ...++.|+..|..||..|.+.+.
T Consensus 276 ~~t~~~~vya~GD~~~~~-~~~~~~A~~~g~~aa~~i~~~l~ 316 (319)
T 3cty_A 276 QRTSVPGVYAAGDVTSGN-FAQIASAVGDGCKAALSLYSDSI 316 (319)
T ss_dssp CBCSSTTEEECSTTBTTC-CCCHHHHHHHHHHHHHHHHHHHT
T ss_pred CccCCCCEEEeecccCcc-hhhHHHHHHHHHHHHHHHHHHhh
Confidence 345578999999998753 34788899999999999988774
No 193
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=72.86 E-value=6.1 Score=36.74 Aligned_cols=46 Identities=24% Similarity=0.398 Sum_probs=35.2
Q ss_pred HHHHHHHhc-cCCeecCceeEEEEecCCeeEEEEcCCcEEEcCEEEEecCh
Q 017808 103 LPVINTLAK-GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 152 (365)
Q Consensus 103 ~~L~~~L~~-~l~I~l~~~V~~I~~~~~~v~V~~~~g~~~~ad~VI~t~p~ 152 (365)
..+.+.|.+ ++++++++.|++++. + .|++.+|+++.||.||+++..
T Consensus 192 ~~~~~~l~~~gV~i~~~~~v~~~~~--~--~v~~~~g~~~~~D~vl~a~G~ 238 (437)
T 4eqs_A 192 QPILDELDKREIPYRLNEEINAING--N--EITFKSGKVEHYDMIIEGVGT 238 (437)
T ss_dssp HHHHHHHHHTTCCEEESCCEEEEET--T--EEEETTSCEEECSEEEECCCE
T ss_pred HHHHHHhhccceEEEeccEEEEecC--C--eeeecCCeEEeeeeEEEEece
Confidence 444555544 678999999998863 2 467789999999999999863
No 194
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=72.29 E-value=5.8 Score=38.88 Aligned_cols=50 Identities=18% Similarity=0.105 Sum_probs=36.0
Q ss_pred HHHHHHhc-----cCCeecCceeEEEEecCCeeE-EE--E-cCCc--EEEcCEEEEecChh
Q 017808 104 PVINTLAK-----GLDIRLGHRVTKITRHYIGVK-VT--V-EGGK--TFVADAVVVAVPLG 153 (365)
Q Consensus 104 ~L~~~L~~-----~l~I~l~~~V~~I~~~~~~v~-V~--~-~~g~--~~~ad~VI~t~p~~ 153 (365)
.|.+.|.+ +++|+++++|.+|..++++|. |. . .+|+ .+.|++||+|+-..
T Consensus 156 ~l~~~L~~~~~~~gv~i~~~~~v~~Li~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~ 216 (621)
T 2h88_A 156 SLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIEDGTIHRFRAKNTVIATGGY 216 (621)
T ss_dssp HHHHHHHHHHTTSCCEEEETEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCCCC
T ss_pred HHHHHHHHHHHhCCCEEEEceEEEEEEEECCEEEEEEEEEcCCCcEEEEEcCeEEECCCcc
Confidence 45555543 568999999999987766543 33 3 4675 68999999998753
No 195
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=72.22 E-value=3.3 Score=38.39 Aligned_cols=46 Identities=15% Similarity=-0.004 Sum_probs=32.8
Q ss_pred HHHHHHhc-cCCeecCceeEEEEecCCeeEEEEc--CCcEEEcCEEEEecC
Q 017808 104 PVINTLAK-GLDIRLGHRVTKITRHYIGVKVTVE--GGKTFVADAVVVAVP 151 (365)
Q Consensus 104 ~L~~~L~~-~l~I~l~~~V~~I~~~~~~v~V~~~--~g~~~~ad~VI~t~p 151 (365)
.+.+.|.+ +++|+++++|++|+. +++.+... +|+++.||.||++++
T Consensus 205 ~l~~~l~~~GV~i~~~~~v~~v~~--~~v~~~~~~~~g~~i~~D~vv~a~G 253 (430)
T 3h28_A 205 LVEDLFAERNIDWIANVAVKAIEP--DKVIYEDLNGNTHEVPAKFTMFMPS 253 (430)
T ss_dssp HHHHHHHHTTCEEECSCEEEEECS--SEEEEECTTSCEEEEECSEEEEECE
T ss_pred HHHHHHHHCCCEEEeCCEEEEEeC--CeEEEEecCCCceEEeeeEEEECCC
Confidence 34445544 689999999999964 45555432 267899999999865
No 196
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=72.12 E-value=7 Score=38.60 Aligned_cols=50 Identities=16% Similarity=0.166 Sum_probs=35.6
Q ss_pred HHHHHHhc-----cCCeecCceeEEEEecCCee---EEEE-cCCc--EEEcCEEEEecChh
Q 017808 104 PVINTLAK-----GLDIRLGHRVTKITRHYIGV---KVTV-EGGK--TFVADAVVVAVPLG 153 (365)
Q Consensus 104 ~L~~~L~~-----~l~I~l~~~V~~I~~~~~~v---~V~~-~~g~--~~~ad~VI~t~p~~ 153 (365)
.|.+.|.+ +++|+.+++|.+|..++++| .+.. .+|+ .+.|++||+|+-..
T Consensus 159 ~l~~~L~~~a~~~gv~i~~~~~v~~L~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~ 219 (660)
T 2bs2_A 159 TMLFAVANECLKLGVSIQDRKEAIALIHQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGY 219 (660)
T ss_dssp HHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECCCCC
T ss_pred HHHHHHHHHHHhCCCEEEECcEEEEEEecCCEEEEEEEEECCCCcEEEEEcCEEEEccCcc
Confidence 45555543 67899999999998766643 3332 5675 48999999998653
No 197
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=71.43 E-value=5.7 Score=39.03 Aligned_cols=49 Identities=22% Similarity=0.175 Sum_probs=35.9
Q ss_pred HHHHHhc-cC--CeecCceeEEEEecCC----eeEEEEc------CC--cEEEcCEEEEecChh
Q 017808 105 VINTLAK-GL--DIRLGHRVTKITRHYI----GVKVTVE------GG--KTFVADAVVVAVPLG 153 (365)
Q Consensus 105 L~~~L~~-~l--~I~l~~~V~~I~~~~~----~v~V~~~------~g--~~~~ad~VI~t~p~~ 153 (365)
|.+.+.+ ++ +|+++++|++|..+++ +|.|++. +| ++++||.||.|.-..
T Consensus 147 L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~~G~~~~i~a~~vVgADG~~ 210 (639)
T 2dkh_A 147 YLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAAHAGQIETVQARYVVGCDGAR 210 (639)
T ss_dssp HHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGGTTCEEEEEEEEEEECCCTT
T ss_pred HHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEeccccCCCCeEEEEeCEEEECCCcc
Confidence 3444443 33 8999999999998763 5777654 46 578999999998764
No 198
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=71.33 E-value=5 Score=35.51 Aligned_cols=39 Identities=28% Similarity=0.378 Sum_probs=32.7
Q ss_pred cCCeecCceeEEEEecCCeeEE-EEcCCcEEEcCEEEEecCh
Q 017808 112 GLDIRLGHRVTKITRHYIGVKV-TVEGGKTFVADAVVVAVPL 152 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~v~V-~~~~g~~~~ad~VI~t~p~ 152 (365)
++++++++ |.+|.. ++.+.| .+.+|+++.+|+||+|+-.
T Consensus 85 ~v~~~~~~-v~~i~~-~~~~~v~~~~~g~~~~~d~lviAtG~ 124 (335)
T 2a87_A 85 GADLRMED-VESVSL-HGPLKSVVTADGQTHRARAVILAMGA 124 (335)
T ss_dssp TCEEECCC-EEEEEC-SSSSEEEEETTSCEEEEEEEEECCCE
T ss_pred CCEEEEee-EEEEEe-CCcEEEEEeCCCCEEEeCEEEECCCC
Confidence 56788887 999988 566778 7888889999999999875
No 199
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=71.17 E-value=2.8 Score=38.59 Aligned_cols=36 Identities=25% Similarity=0.404 Sum_probs=27.7
Q ss_pred CCCCCEEEeccccCC-CCcc--hhHHHHHHHHHHHHHHH
Q 017808 298 IPVDNLFFAGEATSM-SYPG--SVHGAFSTGLMAAEDCR 333 (365)
Q Consensus 298 ~p~~~l~~aG~~~~~-~~~g--~v~gA~~SG~~aA~~i~ 333 (365)
+.+++||||||-+.- ++.| .+..|+.||+.|++.+.
T Consensus 361 ~~~~gly~~GE~ldv~g~~GGynlq~a~~sg~~ag~~~~ 399 (401)
T 2gqf_A 361 NQVSGLYFIGEVLDVTGWLGGYNFQWAWSSAYACALSIS 399 (401)
T ss_dssp SSSTTEEECGGGBSCEECTTTHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEEEeEEeccCCCCHHHHHHHHHHHHHHHHHh
Confidence 457899999998775 2222 56789999999998763
No 200
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=71.11 E-value=4.9 Score=37.90 Aligned_cols=41 Identities=24% Similarity=0.349 Sum_probs=34.7
Q ss_pred cCCeecCceeEEEEecCCeeEEEE-cCCc--EEEcCEEEEecCh
Q 017808 112 GLDIRLGHRVTKITRHYIGVKVTV-EGGK--TFVADAVVVAVPL 152 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~v~V~~-~~g~--~~~ad~VI~t~p~ 152 (365)
++++++++.|..|...++.|.+.. .+|+ ++.+|++|+|+-.
T Consensus 107 gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtG~ 150 (480)
T 3cgb_A 107 GIDAKVRHEVTKVDTEKKIVYAEHTKTKDVFEFSYDRLLIATGV 150 (480)
T ss_dssp CCEEESSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred CCEEEeCCEEEEEECCCCEEEEEEcCCCceEEEEcCEEEECCCC
Confidence 578999999999998888888876 4576 7999999999874
No 201
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=71.01 E-value=2.9 Score=41.63 Aligned_cols=47 Identities=23% Similarity=0.249 Sum_probs=33.8
Q ss_pred HHHHHHhc-cCCeecCceeEEEEecCCeeEEEE---cCCcEEEcCEEEEecCh
Q 017808 104 PVINTLAK-GLDIRLGHRVTKITRHYIGVKVTV---EGGKTFVADAVVVAVPL 152 (365)
Q Consensus 104 ~L~~~L~~-~l~I~l~~~V~~I~~~~~~v~V~~---~~g~~~~ad~VI~t~p~ 152 (365)
.+.+.|.+ +++|+++++|++|.. +++.+.. .+++++.||.||+++..
T Consensus 572 ~l~~~l~~~GV~i~~~~~V~~i~~--~~~~v~~~~~~~~~~i~aD~VV~A~G~ 622 (690)
T 3k30_A 572 RIQRRLIENGVARVTDHAVVAVGA--GGVTVRDTYASIERELECDAVVMVTAR 622 (690)
T ss_dssp HHHHHHHHTTCEEEESEEEEEEET--TEEEEEETTTCCEEEEECSEEEEESCE
T ss_pred HHHHHHHHCCCEEEcCcEEEEEEC--CeEEEEEccCCeEEEEECCEEEECCCC
Confidence 34445543 678999999999974 3455543 35568999999999874
No 202
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=70.27 E-value=5.8 Score=38.71 Aligned_cols=41 Identities=24% Similarity=0.045 Sum_probs=31.8
Q ss_pred CCeecCceeEEEEecCCee---EEEE-cCCc--EEEcCEEEEecChh
Q 017808 113 LDIRLGHRVTKITRHYIGV---KVTV-EGGK--TFVADAVVVAVPLG 153 (365)
Q Consensus 113 l~I~l~~~V~~I~~~~~~v---~V~~-~~g~--~~~ad~VI~t~p~~ 153 (365)
++|+++++|++|..++++| .+.. .+|+ .+.|+.||+|+-..
T Consensus 150 v~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~ 196 (602)
T 1kf6_A 150 IQRFDEHFVLDILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGA 196 (602)
T ss_dssp EEEEETEEEEEEEEETTEEEEEEEEETTTTEEEEEECSCEEECCCCC
T ss_pred cEEEeCCEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCC
Confidence 6799999999999877753 3332 5776 68999999999753
No 203
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=70.20 E-value=7 Score=36.17 Aligned_cols=48 Identities=15% Similarity=0.072 Sum_probs=34.8
Q ss_pred HHHHHH-Hhc-cCCeecCceeEEEEecCCeeEEEEcCC--cEEEcCEEEEecCh
Q 017808 103 LPVINT-LAK-GLDIRLGHRVTKITRHYIGVKVTVEGG--KTFVADAVVVAVPL 152 (365)
Q Consensus 103 ~~L~~~-L~~-~l~I~l~~~V~~I~~~~~~v~V~~~~g--~~~~ad~VI~t~p~ 152 (365)
..+++. |.+ ++++++|+.|++|+ ++++.+...+| +++.||.||++++.
T Consensus 203 ~~~l~~~l~~~GV~~~~~~~v~~v~--~~~~~~~~~~g~~~~i~~d~vi~~~G~ 254 (430)
T 3hyw_A 203 KRLVEDLFAERNIDWIANVAVKAIE--PDKVIYEDLNGNTHEVPAKFTMFMPSF 254 (430)
T ss_dssp HHHHHHHHHHTTCEEECSCEEEEEC--SSEEEEECTTSCEEEEECSEEEEECEE
T ss_pred HHHHHHHHHhCCeEEEeCceEEEEe--CCceEEEeeCCCceEeecceEEEeccC
Confidence 334443 333 78999999999985 45666666555 57899999999864
No 204
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=69.39 E-value=4.2 Score=37.75 Aligned_cols=39 Identities=26% Similarity=0.345 Sum_probs=32.9
Q ss_pred cCCeecCceeEEEEecCCeeEEEEcCCcEEEcCEEEEecCh
Q 017808 112 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 152 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~v~V~~~~g~~~~ad~VI~t~p~ 152 (365)
+++++++++|+.|...+. .|++.+|+++.+|+||+|+-.
T Consensus 74 gv~~~~~~~v~~i~~~~~--~v~~~~g~~~~~d~lviAtG~ 112 (431)
T 1q1r_A 74 NIQLLGGTQVTAINRDRQ--QVILSDGRALDYDRLVLATGG 112 (431)
T ss_dssp TEEEECSCCEEEEETTTT--EEEETTSCEEECSEEEECCCE
T ss_pred CCEEEeCCEEEEEECCCC--EEEECCCCEEECCEEEEcCCC
Confidence 678999999999987655 466678888999999999975
No 205
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=68.48 E-value=4 Score=39.37 Aligned_cols=38 Identities=24% Similarity=0.417 Sum_probs=32.9
Q ss_pred CCCCEEEeccccCCCCcchhHHHHHHHHHHHHHHHHHHHH
Q 017808 299 PVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVLE 338 (365)
Q Consensus 299 p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l~~ 338 (365)
.+++||-|||... |.|++-.|-.+|.++|+.|++.+..
T Consensus 507 ~~~gly~~GegaG--~a~gi~~Aa~~G~~~a~~i~~~~~~ 544 (549)
T 3nlc_A 507 NLKGFYPAGEGAG--YAGGILSAGIDGIKVAEAVARDIVA 544 (549)
T ss_dssp TCBTEEECHHHHT--SCCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCEEEccccCC--hhhHHHHHHHHHHHHHHHHHHHhhh
Confidence 4789999999974 5788999999999999999988753
No 206
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=68.14 E-value=5.5 Score=36.62 Aligned_cols=39 Identities=28% Similarity=0.445 Sum_probs=33.2
Q ss_pred cCCeecCceeEEEEecCCeeEEEEcCCcEEEcCEEEEecCh
Q 017808 112 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 152 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~v~V~~~~g~~~~ad~VI~t~p~ 152 (365)
+++++++++|+.|..... .|++.+|+++.+|++|+|+-.
T Consensus 71 ~i~~~~~~~v~~id~~~~--~v~~~~g~~~~~d~lvlAtG~ 109 (410)
T 3ef6_A 71 RIDMLTGPEVTALDVQTR--TISLDDGTTLSADAIVIATGS 109 (410)
T ss_dssp TCEEEESCCEEEEETTTT--EEEETTSCEEECSEEEECCCE
T ss_pred CCEEEeCCEEEEEECCCC--EEEECCCCEEECCEEEEccCC
Confidence 678999999999987654 467788989999999999874
No 207
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=67.62 E-value=4.4 Score=36.70 Aligned_cols=42 Identities=14% Similarity=0.207 Sum_probs=31.8
Q ss_pred HHHHhc-cCCeecCceeEEEEecCCeeEEEEcCCcEEEcCEEEEecCh
Q 017808 106 INTLAK-GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 152 (365)
Q Consensus 106 ~~~L~~-~l~I~l~~~V~~I~~~~~~v~V~~~~g~~~~ad~VI~t~p~ 152 (365)
.+.|.+ +++|+++++|++|. .+ .|++.+|+ +.||.||+++..
T Consensus 190 ~~~l~~~gV~i~~~~~v~~i~--~~--~v~~~~g~-i~~D~vi~a~G~ 232 (367)
T 1xhc_A 190 KDMLEETGVKFFLNSELLEAN--EE--GVLTNSGF-IEGKVKICAIGI 232 (367)
T ss_dssp HHHHHHTTEEEECSCCEEEEC--SS--EEEETTEE-EECSCEEEECCE
T ss_pred HHHHHHCCCEEEcCCEEEEEE--ee--EEEECCCE-EEcCEEEECcCC
Confidence 344433 67899999999997 23 36667887 999999999864
No 208
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=66.73 E-value=6.8 Score=38.74 Aligned_cols=45 Identities=27% Similarity=0.338 Sum_probs=34.3
Q ss_pred HHHHhc-cCCeecCceeEEEEecCCeeEEEEcCC--cEEEcCEEEEecChh
Q 017808 106 INTLAK-GLDIRLGHRVTKITRHYIGVKVTVEGG--KTFVADAVVVAVPLG 153 (365)
Q Consensus 106 ~~~L~~-~l~I~l~~~V~~I~~~~~~v~V~~~~g--~~~~ad~VI~t~p~~ 153 (365)
.+.|.+ +++|+++++|++|. ++++.++ .+| +++.||.||+++...
T Consensus 580 ~~~l~~~GV~v~~~~~v~~i~--~~~v~~~-~~G~~~~i~~D~Vi~a~G~~ 627 (671)
T 1ps9_A 580 RTTLLSRGVKMIPGVSYQKID--DDGLHVV-INGETQVLAVDNVVICAGQE 627 (671)
T ss_dssp HHHHHHTTCEEECSCEEEEEE--TTEEEEE-ETTEEEEECCSEEEECCCEE
T ss_pred HHHHHhcCCEEEeCcEEEEEe--CCeEEEe-cCCeEEEEeCCEEEECCCcc
Confidence 444543 78999999999997 4566665 577 578999999998753
No 209
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=65.86 E-value=6.4 Score=36.17 Aligned_cols=39 Identities=18% Similarity=0.245 Sum_probs=32.3
Q ss_pred cCCeecCceeEEEEecCCeeEEEEcCCcEEEcCEEEEecCh
Q 017808 112 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 152 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~v~V~~~~g~~~~ad~VI~t~p~ 152 (365)
+++++++++|+.|..... +|++.+|+++.+|++|+|+-.
T Consensus 73 ~v~~~~~~~v~~i~~~~~--~v~~~~g~~~~~d~lviAtG~ 111 (408)
T 2gqw_A 73 EVEWLLGVTAQSFDPQAH--TVALSDGRTLPYGTLVLATGA 111 (408)
T ss_dssp SCEEEETCCEEEEETTTT--EEEETTSCEEECSEEEECCCE
T ss_pred CCEEEcCCEEEEEECCCC--EEEECCCCEEECCEEEECCCC
Confidence 567899999999987654 466678889999999999975
No 210
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=65.83 E-value=4 Score=38.72 Aligned_cols=39 Identities=15% Similarity=0.278 Sum_probs=32.5
Q ss_pred cCCeecCceeEEEEecCCeeEEEEcCCcEEEcCEEEEecCh
Q 017808 112 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 152 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~v~V~~~~g~~~~ad~VI~t~p~ 152 (365)
+++++++++|.+|..... +|++.+|+++.+|++|+|+-.
T Consensus 104 gv~~~~g~~v~~id~~~~--~V~~~~g~~i~yd~lviATGs 142 (493)
T 1m6i_A 104 GVAVLTGKKVVQLDVRDN--MVKLNDGSQITYEKCLIATGG 142 (493)
T ss_dssp EEEEEETCCEEEEEGGGT--EEEETTSCEEEEEEEEECCCE
T ss_pred CeEEEcCCEEEEEECCCC--EEEECCCCEEECCEEEECCCC
Confidence 567899999999987654 466788989999999999864
No 211
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=65.60 E-value=7.7 Score=30.66 Aligned_cols=40 Identities=18% Similarity=0.097 Sum_probs=31.9
Q ss_pred hCCCCCEEEeccccCCCCcchhHHHHHHHHHHHHHHHHHHH
Q 017808 297 RIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVL 337 (365)
Q Consensus 297 ~~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l~ 337 (365)
++..+++|.+||...... ...+-|+..|..+|..|...+.
T Consensus 132 ~t~~~~i~a~GD~~~~~~-~~~~~A~~~g~~aa~~i~~~~~ 171 (180)
T 2ywl_A 132 RTSYPRVYAAGVARGKVP-GHAIISAGDGAYVAVHLVSDLR 171 (180)
T ss_dssp BCSSTTEEECGGGGTCCS-CCHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCCCEEEeecccCcch-hhHHHHHHhHHHHHHHHHHHhh
Confidence 344679999999987632 2678899999999999987765
No 212
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=64.66 E-value=8.8 Score=36.60 Aligned_cols=42 Identities=12% Similarity=0.160 Sum_probs=35.0
Q ss_pred cCCeecCceeEEEEecC---CeeEEEEcCCcEEEcCEEEEecChh
Q 017808 112 GLDIRLGHRVTKITRHY---IGVKVTVEGGKTFVADAVVVAVPLG 153 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~---~~v~V~~~~g~~~~ad~VI~t~p~~ 153 (365)
+++++++++|+.|.... +.+.|++.+|+++.+|+||+|+-..
T Consensus 281 gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~ 325 (521)
T 1hyu_A 281 DVDVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIIIATGAK 325 (521)
T ss_dssp CEEEECSCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEE
T ss_pred CCEEEcCCEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCCC
Confidence 45799999999998642 3688999999899999999999853
No 213
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=64.62 E-value=8 Score=36.72 Aligned_cols=41 Identities=17% Similarity=0.108 Sum_probs=31.1
Q ss_pred CCeecCceeEEEEecC-C-ee-EEEE--cCC-----cEEEcCEEEEecChh
Q 017808 113 LDIRLGHRVTKITRHY-I-GV-KVTV--EGG-----KTFVADAVVVAVPLG 153 (365)
Q Consensus 113 l~I~l~~~V~~I~~~~-~-~v-~V~~--~~g-----~~~~ad~VI~t~p~~ 153 (365)
++|++++.|++|..++ + .+ .|++ .+| .++.|+.||+++..-
T Consensus 237 ~~i~~~~~V~~i~~~~~g~~~~gV~~~~~~g~~~~~~~v~A~~VIlaaG~~ 287 (504)
T 1n4w_A 237 VTIQTLHQVKTIRQTKDGGYALTVEQKDTDGKLLATKEISCRYLFLGAGSL 287 (504)
T ss_dssp EEEEESEEEEEEEECTTSSEEEEEEEECTTCCEEEEEEEEEEEEEECSHHH
T ss_pred cEEEeCCEEEEEEECCCCCEEEEEEEeCCCCccceeEEEeeCEEEEccCCC
Confidence 7899999999999875 2 33 3555 356 368899999998754
No 214
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=64.40 E-value=9.9 Score=35.18 Aligned_cols=45 Identities=18% Similarity=0.179 Sum_probs=32.1
Q ss_pred HHHHHhc-cCCeecCceeEEEEecCCeeEEEE--cC-----CcEEEcCEEEEecC
Q 017808 105 VINTLAK-GLDIRLGHRVTKITRHYIGVKVTV--EG-----GKTFVADAVVVAVP 151 (365)
Q Consensus 105 L~~~L~~-~l~I~l~~~V~~I~~~~~~v~V~~--~~-----g~~~~ad~VI~t~p 151 (365)
+.+.|.+ +++++++++|++|.. +++.+.. .+ ++++.||.||++++
T Consensus 214 ~~~~l~~~gI~~~~~~~v~~v~~--~~v~~~~~~~~g~~~~~~~i~~D~vv~~~g 266 (437)
T 3sx6_A 214 LTKGLKEEGIEAYTNCKVTKVED--NKMYVTQVDEKGETIKEMVLPVKFGMMIPA 266 (437)
T ss_dssp HHHHHHHTTCEEECSEEEEEEET--TEEEEEEECTTSCEEEEEEEECSEEEEECC
T ss_pred HHHHHHHCCCEEEcCCEEEEEEC--CeEEEEecccCCccccceEEEEeEEEEcCC
Confidence 3344444 689999999999964 4555543 23 56789999999865
No 215
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=64.28 E-value=4.6 Score=38.19 Aligned_cols=41 Identities=17% Similarity=0.128 Sum_probs=32.9
Q ss_pred cCCeecCceeEEEEecCCeeEEEE-cCCcEEEcCEEEEecCh
Q 017808 112 GLDIRLGHRVTKITRHYIGVKVTV-EGGKTFVADAVVVAVPL 152 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~v~V~~-~~g~~~~ad~VI~t~p~ 152 (365)
+++++++++|..|...++.|.|.+ .+++++.+|+||+|+-.
T Consensus 106 gv~v~~~~~v~~i~~~~~~v~v~~~g~~~~~~~d~lviAtG~ 147 (490)
T 2bc0_A 106 GAKVYMESPVQSIDYDAKTVTALVDGKNHVETYDKLIFATGS 147 (490)
T ss_dssp TCEEETTCCEEEEETTTTEEEEEETTEEEEEECSEEEECCCE
T ss_pred CCEEEeCCEEEEEECCCCEEEEEeCCcEEEEECCEEEECCCC
Confidence 678899999999998888777752 22457999999999974
No 216
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=64.24 E-value=6.6 Score=37.71 Aligned_cols=41 Identities=22% Similarity=0.252 Sum_probs=33.7
Q ss_pred cCCeecCceeEEEEecCCeeEEEE-cCCc--EEEcCEEEEecCh
Q 017808 112 GLDIRLGHRVTKITRHYIGVKVTV-EGGK--TFVADAVVVAVPL 152 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~v~V~~-~~g~--~~~ad~VI~t~p~ 152 (365)
+++++++++|++|...++.+.+.. .+|+ ++.+|+||+|+-.
T Consensus 72 ~i~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~ 115 (565)
T 3ntd_A 72 NVEVRVKHEVVAIDRAAKLVTVRRLLDGSEYQESYDTLLLSPGA 115 (565)
T ss_dssp CCEEETTEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred CcEEEECCEEEEEECCCCEEEEEecCCCCeEEEECCEEEECCCC
Confidence 678999999999999888888775 2343 7899999999865
No 217
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=63.57 E-value=7.9 Score=35.40 Aligned_cols=38 Identities=34% Similarity=0.393 Sum_probs=32.2
Q ss_pred CCCCEEEeccccCCCCcchhHHHHHHHHHHHHHHHHHH
Q 017808 299 PVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRV 336 (365)
Q Consensus 299 p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l 336 (365)
..+|+|.+||.+....+...+.|...|..+|+.|...+
T Consensus 298 ~~~~vfa~GD~~~~~~~~~~~~A~~q~~~aa~~i~~~l 335 (409)
T 3h8l_A 298 KYDNVYAVGDANSMTVPKLGYLAVMTGRIAAQHLANRL 335 (409)
T ss_dssp SCTTEEECGGGBTTCCSCCHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCEEEeehhccCCCCcHHHHHHHHHHHHHHHHHHHh
Confidence 46899999999875445678899999999999998877
No 218
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=63.25 E-value=8.3 Score=36.65 Aligned_cols=42 Identities=31% Similarity=0.208 Sum_probs=31.3
Q ss_pred cCCeecCceeEEEEecC-C-ee-EEEEc--CC-----cEEEcCEEEEecChh
Q 017808 112 GLDIRLGHRVTKITRHY-I-GV-KVTVE--GG-----KTFVADAVVVAVPLG 153 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~-~-~v-~V~~~--~g-----~~~~ad~VI~t~p~~ 153 (365)
.++|++++.|++|..++ + .+ .|.+. +| .++.|+.||+++..-
T Consensus 241 n~~i~~~~~v~~i~~~~~g~~~~gV~~~~~~g~~~~~~~~~A~~VIlaaGa~ 292 (507)
T 1coy_A 241 KLTITTLHRVTKVAPATGSGYSVTMEQIDEQGNVVATKVVTADRVFFAAGSV 292 (507)
T ss_dssp CEEEECSEEEEEEEECSSSSEEEEEEEECTTSCEEEEEEEEEEEEEECSHHH
T ss_pred CcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCcccccEEEEeCEEEEccCcc
Confidence 37899999999999876 3 33 35543 56 367899999998754
No 219
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=62.36 E-value=9.4 Score=35.44 Aligned_cols=41 Identities=17% Similarity=0.187 Sum_probs=33.5
Q ss_pred cCCeecCceeEEEEecCCeeEEEE-cCCc--EEEcCEEEEecCh
Q 017808 112 GLDIRLGHRVTKITRHYIGVKVTV-EGGK--TFVADAVVVAVPL 152 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~v~V~~-~~g~--~~~ad~VI~t~p~ 152 (365)
++++++++.|..|...++.|.+.. .+|+ ++.+|++|+|+-.
T Consensus 70 gv~~~~~~~v~~i~~~~~~v~~~~~~~g~~~~~~~d~lviAtG~ 113 (447)
T 1nhp_A 70 GVNVFSNTEITAIQPKEHQVTVKDLVSGEERVENYDKLIISPGA 113 (447)
T ss_dssp TCEEEETEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred CCEEEECCEEEEEeCCCCEEEEEecCCCceEEEeCCEEEEcCCC
Confidence 678889999999998888887765 4465 3899999999864
No 220
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=61.83 E-value=9.2 Score=37.01 Aligned_cols=41 Identities=20% Similarity=0.252 Sum_probs=34.2
Q ss_pred cCCeecCceeEEEEecCCeeEEEE-cCCc--EEEcCEEEEecCh
Q 017808 112 GLDIRLGHRVTKITRHYIGVKVTV-EGGK--TFVADAVVVAVPL 152 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~v~V~~-~~g~--~~~ad~VI~t~p~ 152 (365)
+++++++++|++|...++.+.+.. .+|+ ++.+|+||+|+-.
T Consensus 107 gi~v~~~~~V~~id~~~~~v~v~~~~~g~~~~~~~d~lviAtG~ 150 (588)
T 3ics_A 107 NLDIRVLSEVVKINKEEKTITIKNVTTNETYNEAYDVLILSPGA 150 (588)
T ss_dssp TCEEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred CcEEEECCEEEEEECCCCEEEEeecCCCCEEEEeCCEEEECCCC
Confidence 567899999999999888888775 3565 6899999999864
No 221
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=61.53 E-value=7.6 Score=37.27 Aligned_cols=39 Identities=28% Similarity=0.373 Sum_probs=29.1
Q ss_pred CCCCCEEEeccccCCCC-------cchhHHHHHHHHHHHHHHHHHH
Q 017808 298 IPVDNLFFAGEATSMSY-------PGSVHGAFSTGLMAAEDCRMRV 336 (365)
Q Consensus 298 ~p~~~l~~aG~~~~~~~-------~g~v~gA~~SG~~aA~~i~~~l 336 (365)
+++++||.|||..+.+. ..++-.|+..|++|++.+.+.+
T Consensus 365 t~I~GLyAaGE~a~~g~hGanrl~gnsl~~~~vfG~~Ag~~aa~~~ 410 (540)
T 1chu_A 365 TDVEGLYAIGEVSYTGLHGANRMASNSLLECLVYGWSAAEDITRRM 410 (540)
T ss_dssp CSSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHHHHHHHHHC
T ss_pred CccCCEEeccccccccccCCCcCcchhHHHHHHHHHHHHHHHHHhc
Confidence 78999999999873221 1256668899999999876543
No 222
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=61.24 E-value=9.7 Score=35.63 Aligned_cols=41 Identities=22% Similarity=0.276 Sum_probs=33.1
Q ss_pred cCCeecCceeEEEEecCCeeEEEE-cCCc--EEEcCEEEEecCh
Q 017808 112 GLDIRLGHRVTKITRHYIGVKVTV-EGGK--TFVADAVVVAVPL 152 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~v~V~~-~~g~--~~~ad~VI~t~p~ 152 (365)
+++++++++|++|...++.+.+.. .+|+ .+.+|++|+++-.
T Consensus 80 gi~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~ 123 (472)
T 3iwa_A 80 DVEALVETRAHAIDRAAHTVEIENLRTGERRTLKYDKLVLALGS 123 (472)
T ss_dssp -CEEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred CcEEEECCEEEEEECCCCEEEEeecCCCCEEEEECCEEEEeCCC
Confidence 567889999999999888888775 3354 7899999999864
No 223
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=60.88 E-value=6.6 Score=35.05 Aligned_cols=38 Identities=26% Similarity=0.329 Sum_probs=29.3
Q ss_pred CCCEEEeccccC-----CCCcchhHHHHHHHHHHHHHHHHHHH
Q 017808 300 VDNLFFAGEATS-----MSYPGSVHGAFSTGLMAAEDCRMRVL 337 (365)
Q Consensus 300 ~~~l~~aG~~~~-----~~~~g~v~gA~~SG~~aA~~i~~~l~ 337 (365)
+++||++|.... +......-|-+.||++||+.|++.+.
T Consensus 283 ~~~~~~~g~~~~~~~~~~r~g~~fg~m~~sg~~~a~~~~~~~~ 325 (326)
T 2gjc_A 283 VDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILKHFA 325 (326)
T ss_dssp STTEEECTHHHHHHHTCCBCCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred cCCEEECChHHHHhcCCCCCChhhhhhhhhhHHHHHHHHHHhh
Confidence 589999998863 22223566778999999999998875
No 224
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=60.55 E-value=4.8 Score=37.27 Aligned_cols=34 Identities=29% Similarity=0.634 Sum_probs=24.6
Q ss_pred CCCCCEEEeccccCC-CCcc--hhHHHHHHHHHHHHH
Q 017808 298 IPVDNLFFAGEATSM-SYPG--SVHGAFSTGLMAAED 331 (365)
Q Consensus 298 ~p~~~l~~aG~~~~~-~~~g--~v~gA~~SG~~aA~~ 331 (365)
+-++|||||||-+.- ++.| .+.-|+.||..|++.
T Consensus 380 k~~~gLy~aGE~lD~~~~~GGynlq~a~stG~~ag~~ 416 (417)
T 3v76_A 380 KEVPGLYFVGECVDVTGWLGGYNFQWAWASGFVAGQD 416 (417)
T ss_dssp TTSTTEEECGGGBSEEECSSSHHHHHHHHHHHHHHHH
T ss_pred cCCCCeEEEEEeEecccCCCCHHHHHHHHHHHHHhCc
Confidence 346899999977653 2222 578899999988764
No 225
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=59.33 E-value=17 Score=35.66 Aligned_cols=43 Identities=26% Similarity=0.359 Sum_probs=31.4
Q ss_pred hCCCCCEEEeccccCCCCcchhHHHHHHHHHHHHHHHHHHHHH
Q 017808 297 RIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVLER 339 (365)
Q Consensus 297 ~~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l~~~ 339 (365)
.+++++||-|||..........-+++..|+.|++.+.+.+...
T Consensus 428 ~t~I~GLyAaGe~a~~~~~r~~~~sl~~G~~ag~~aa~~~~~~ 470 (643)
T 1jnr_A 428 MTTVKGLFAIGDCAGANPHKFSSGSFTEGRIAAKAAVRFILEQ 470 (643)
T ss_dssp BCSSBTEEECGGGBCSCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CceeCCEEeeeccccccccccchhHHHHHHHHHHHHHHHHhcc
Confidence 4789999999998765333344467888888888877766543
No 226
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=59.08 E-value=6 Score=37.23 Aligned_cols=50 Identities=18% Similarity=0.014 Sum_probs=34.0
Q ss_pred HHHHHHHhc-cCCeecCceeEEEEecCCeeE-EE--EcCCcEEEcCEEEEecChhh
Q 017808 103 LPVINTLAK-GLDIRLGHRVTKITRHYIGVK-VT--VEGGKTFVADAVVVAVPLGV 154 (365)
Q Consensus 103 ~~L~~~L~~-~l~I~l~~~V~~I~~~~~~v~-V~--~~~g~~~~ad~VI~t~p~~~ 154 (365)
..|.+.+.+ +++|+++++| +|..+++.+. |. +.+| ++.||.||+|+-...
T Consensus 123 ~~L~~~~~~~gv~i~~~~~v-~l~~~~~~v~Gv~v~~~~g-~~~a~~VVlAtGg~~ 176 (472)
T 2e5v_A 123 NFLLKLAREEGIPIIEDRLV-EIRVKDGKVTGFVTEKRGL-VEDVDKLVLATGGYS 176 (472)
T ss_dssp HHHHHHHHHTTCCEECCCEE-EEEEETTEEEEEEETTTEE-ECCCSEEEECCCCCG
T ss_pred HHHHHHHHhCCCEEEECcEE-EEEEeCCEEEEEEEEeCCC-eEEeeeEEECCCCCc
Confidence 334444432 6789999999 9987777653 33 3344 578999999987543
No 227
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=58.94 E-value=7.3 Score=35.23 Aligned_cols=38 Identities=26% Similarity=0.295 Sum_probs=30.8
Q ss_pred cCCeecCceeEEEEecCCeeEEEEcCCcEEEcCEEEEecCh
Q 017808 112 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 152 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~v~V~~~~g~~~~ad~VI~t~p~ 152 (365)
+++++++++|+.|..... .|+ .+|+++.+|++|+|+-.
T Consensus 74 ~v~~~~g~~v~~id~~~~--~V~-~~g~~~~~d~lViATGs 111 (367)
T 1xhc_A 74 GIEIRLAEEAKLIDRGRK--VVI-TEKGEVPYDTLVLATGA 111 (367)
T ss_dssp TEEEECSCCEEEEETTTT--EEE-ESSCEEECSEEEECCCE
T ss_pred CcEEEECCEEEEEECCCC--EEE-ECCcEEECCEEEECCCC
Confidence 578999999999987643 455 57788999999999874
No 228
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=58.48 E-value=6 Score=36.90 Aligned_cols=41 Identities=15% Similarity=0.148 Sum_probs=33.4
Q ss_pred cCCeecCceeEEEEecCCeeEEE-EcCCcEEEcCEEEEecCh
Q 017808 112 GLDIRLGHRVTKITRHYIGVKVT-VEGGKTFVADAVVVAVPL 152 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~v~V~-~~~g~~~~ad~VI~t~p~ 152 (365)
+++++++++|++|....+.|.+. ..+++++.+|++|+|+-.
T Consensus 72 gi~~~~~~~V~~id~~~~~v~v~~~~~~~~~~~d~lviAtG~ 113 (452)
T 3oc4_A 72 KIQLLLNREVVAMDVENQLIAWTRKEEQQWYSYDKLILATGA 113 (452)
T ss_dssp TEEEECSCEEEEEETTTTEEEEEETTEEEEEECSEEEECCCC
T ss_pred CCEEEECCEEEEEECCCCEEEEEecCceEEEEcCEEEECCCc
Confidence 45788999999999988888775 234567999999999865
No 229
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=57.03 E-value=13 Score=32.23 Aligned_cols=38 Identities=16% Similarity=0.210 Sum_probs=28.5
Q ss_pred eecCceeEEEEecC-CeeEEEEcCCcEEEcCEEEEecCh
Q 017808 115 IRLGHRVTKITRHY-IGVKVTVEGGKTFVADAVVVAVPL 152 (365)
Q Consensus 115 I~l~~~V~~I~~~~-~~v~V~~~~g~~~~ad~VI~t~p~ 152 (365)
..++..|..+...+ +.+.|.+.+|+++.+|+||+|+-.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~v~~~~g~~~~a~~liiATGs 115 (304)
T 4fk1_A 77 HYYEKTVVMITKQSTGLFEIVTKDHTKYLAERVLLATGM 115 (304)
T ss_dssp EEEECCEEEEEECTTSCEEEEETTCCEEEEEEEEECCCC
T ss_pred EEEeeEEEEeeecCCCcEEEEECCCCEEEeCEEEEccCC
Confidence 34455566666544 457799999999999999999975
No 230
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=56.17 E-value=13 Score=35.50 Aligned_cols=48 Identities=13% Similarity=0.180 Sum_probs=34.9
Q ss_pred HHHHHhc--cCCeecCceeEEEEecCCeeE-EEEcC---Cc--EE---EcCEEEEecCh
Q 017808 105 VINTLAK--GLDIRLGHRVTKITRHYIGVK-VTVEG---GK--TF---VADAVVVAVPL 152 (365)
Q Consensus 105 L~~~L~~--~l~I~l~~~V~~I~~~~~~v~-V~~~~---g~--~~---~ad~VI~t~p~ 152 (365)
+.+.+.+ +++|++++.|++|..+++++. |++.+ |+ ++ .++.||+++-.
T Consensus 201 ~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~ 259 (546)
T 1kdg_A 201 YLQTALARPNFTFKTNVMVSNVVRNGSQILGVQTNDPTLGPNGFIPVTPKGRVILSAGA 259 (546)
T ss_dssp HHHHHHTCTTEEEECSCCEEEEEEETTEEEEEEESCTTSSGGGEEEEEEEEEEEECSHH
T ss_pred HHHHHhhCCCcEEEeCCEEEEEEEeCCEEEEEEEEecCCCceeEEEEEeCCEEEEcCCh
Confidence 5555543 578999999999998776543 66544 63 33 78999999865
No 231
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=55.08 E-value=13 Score=34.41 Aligned_cols=39 Identities=21% Similarity=0.206 Sum_probs=30.1
Q ss_pred cCCeecCceeEEEEecCCeeEEEEcCCcEEEcCEEEEecChh
Q 017808 112 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLG 153 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~v~V~~~~g~~~~ad~VI~t~p~~ 153 (365)
+++++.+ +|++|..+... |++.+|+++.+|++|+|+-..
T Consensus 70 gv~~i~~-~v~~Id~~~~~--V~~~~g~~i~YD~LViAtG~~ 108 (430)
T 3hyw_A 70 NIEFINE-KAESIDPDANT--VTTQSGKKIEYDYLVIATGPK 108 (430)
T ss_dssp TEEEECS-CEEEEETTTTE--EEETTCCEEECSEEEECCCCE
T ss_pred CcEEEEe-EEEEEECCCCE--EEECCCCEEECCEEEEeCCCC
Confidence 3455544 78999876664 677899999999999999753
No 232
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=54.99 E-value=11 Score=34.95 Aligned_cols=41 Identities=22% Similarity=0.289 Sum_probs=33.3
Q ss_pred cCCeecCceeEEEEecCCeeEEEEc-C--CcEEEcCEEEEecCh
Q 017808 112 GLDIRLGHRVTKITRHYIGVKVTVE-G--GKTFVADAVVVAVPL 152 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~v~V~~~-~--g~~~~ad~VI~t~p~ 152 (365)
+++++++++|..|...++.|.+... + ++++.+|++|+|+-.
T Consensus 72 gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtGs 115 (452)
T 2cdu_A 72 GANVQMRHQVTNVDPETKTIKVKDLITNEEKTEAYDKLIMTTGS 115 (452)
T ss_dssp TCEEEESEEEEEEEGGGTEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred CCEEEeCCEEEEEEcCCCEEEEEecCCCceEEEECCEEEEccCC
Confidence 6788999999999988888877652 2 457999999999874
No 233
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=54.97 E-value=12 Score=36.74 Aligned_cols=36 Identities=44% Similarity=0.723 Sum_probs=27.9
Q ss_pred CCCCEEEeccccCCCCcchhHHHHHHHHHHHHHHHHHHH
Q 017808 299 PVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVL 337 (365)
Q Consensus 299 p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l~ 337 (365)
.++||||||+-+... | .+-|..+|..|+..+...+.
T Consensus 377 ~~~gLf~AGqi~g~~--G-y~eA~a~G~~AG~naa~~~~ 412 (641)
T 3cp8_A 377 PVENLFFAGQINGTS--G-YEEAAAQGLMAGINAVRKIL 412 (641)
T ss_dssp SSBTEEECSGGGTBC--C-HHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCEEEEEeecCCc--c-HHHHHHHHHHHHHHHHHHhc
Confidence 368999999998763 3 44788999999988766554
No 234
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=54.02 E-value=25 Score=30.26 Aligned_cols=37 Identities=16% Similarity=0.238 Sum_probs=29.7
Q ss_pred ecCceeEEEEecCCeeEEEEcCCcEEEcCEEEEecCh
Q 017808 116 RLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 152 (365)
Q Consensus 116 ~l~~~V~~I~~~~~~v~V~~~~g~~~~ad~VI~t~p~ 152 (365)
.....|..+....+...+.+.++.++.+|+||+|+-.
T Consensus 83 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~liiATG~ 119 (314)
T 4a5l_A 83 IITETIDHVDFSTQPFKLFTEEGKEVLTKSVIIATGA 119 (314)
T ss_dssp EECCCEEEEECSSSSEEEEETTCCEEEEEEEEECCCE
T ss_pred EEEeEEEEeecCCCceEEEECCCeEEEEeEEEEcccc
Confidence 3445577777777777788888999999999999975
No 235
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=53.81 E-value=9.6 Score=34.94 Aligned_cols=39 Identities=15% Similarity=0.240 Sum_probs=32.5
Q ss_pred cCCeecCceeEEEEecCCeeEEEEcCCcEEEcCEEEEecCh
Q 017808 112 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 152 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~v~V~~~~g~~~~ad~VI~t~p~ 152 (365)
+++++++++|+.|..... .|++.+|+.+.+|++|+|+-.
T Consensus 79 ~i~~~~~~~v~~id~~~~--~v~~~~g~~~~~d~lvlAtG~ 117 (415)
T 3lxd_A 79 AVEMKLGAEVVSLDPAAH--TVKLGDGSAIEYGKLIWATGG 117 (415)
T ss_dssp TEEEEETCCEEEEETTTT--EEEETTSCEEEEEEEEECCCE
T ss_pred CcEEEeCCEEEEEECCCC--EEEECCCCEEEeeEEEEccCC
Confidence 567999999999987654 466788989999999999863
No 236
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=53.81 E-value=20 Score=37.42 Aligned_cols=42 Identities=12% Similarity=0.151 Sum_probs=34.3
Q ss_pred HhCCCCCEEEeccccCCCCcchhHHHHHHHHHHHHHHHHHHHHH
Q 017808 296 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVLER 339 (365)
Q Consensus 296 l~~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l~~~ 339 (365)
+++..+++|.+||.... +..+..|+..|+.||..|...|...
T Consensus 469 ~~Ts~~~VfA~GD~~~~--~~~~~~A~~~G~~aA~~i~~~L~~~ 510 (1025)
T 1gte_A 469 MQTSEPWVFAGGDIVGM--ANTTVESVNDGKQASWYIHKYIQAQ 510 (1025)
T ss_dssp CBCSSTTEEECSGGGCS--CCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccCCCCEEEeCCCCCC--chHHHHHHHHHHHHHHHHHHHHHhc
Confidence 34556899999999864 4578899999999999999887643
No 237
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=53.63 E-value=15 Score=33.39 Aligned_cols=42 Identities=19% Similarity=0.122 Sum_probs=33.9
Q ss_pred CCCCCEEEeccccCC-CCcchhHHHHHHHHHHHHHHHHHHHHH
Q 017808 298 IPVDNLFFAGEATSM-SYPGSVHGAFSTGLMAAEDCRMRVLER 339 (365)
Q Consensus 298 ~p~~~l~~aG~~~~~-~~~g~v~gA~~SG~~aA~~i~~~l~~~ 339 (365)
+..+|+|-+||.+.. ..+-+.+-|...|..+|+.|++.+..+
T Consensus 284 t~~p~VfAiGDva~~~~~pk~a~~A~~qa~v~A~ni~~~l~G~ 326 (401)
T 3vrd_B 284 SLQPGIHVIGDACNAAPMPKSAYSANSQAKVAAAAVVALLKGE 326 (401)
T ss_dssp SSSTTEEECGGGBCCTTSCBSHHHHHHHHHHHHHHHHHHHHTC
T ss_pred cCCCCEEEecccccCCCCCchHHHHHHHHHHHHHHHHHHhcCC
Confidence 346799999998753 345678899999999999999988643
No 238
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=53.20 E-value=15 Score=34.07 Aligned_cols=39 Identities=31% Similarity=0.463 Sum_probs=31.1
Q ss_pred cCCeecCceeEEEEecCCeeEEEEcCC-cEEEcCEEEEecCh
Q 017808 112 GLDIRLGHRVTKITRHYIGVKVTVEGG-KTFVADAVVVAVPL 152 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~v~V~~~~g-~~~~ad~VI~t~p~ 152 (365)
+++++++++|+.|... ...|.+.+| .++.+|+||+|+-.
T Consensus 73 gi~v~~~~~v~~i~~~--~~~v~~~~g~~~~~~d~lviAtG~ 112 (449)
T 3kd9_A 73 GIDLHLNAEVIEVDTG--YVRVRENGGEKSYEWDYLVFANGA 112 (449)
T ss_dssp TCEEETTCEEEEECSS--EEEEECSSSEEEEECSEEEECCCE
T ss_pred CcEEEecCEEEEEecC--CCEEEECCceEEEEcCEEEECCCC
Confidence 5689999999999643 466777777 47999999999864
No 239
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=53.13 E-value=21 Score=33.83 Aligned_cols=41 Identities=12% Similarity=0.074 Sum_probs=29.2
Q ss_pred cCCeecCceeEEEEecC----CeeEEE--EcCCc---EEEcCEEEEecCh
Q 017808 112 GLDIRLGHRVTKITRHY----IGVKVT--VEGGK---TFVADAVVVAVPL 152 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~----~~v~V~--~~~g~---~~~ad~VI~t~p~ 152 (365)
+++|++++.|++|...+ +++.|+ ..+|+ ++.||.||+++..
T Consensus 264 GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~ 313 (519)
T 3qfa_A 264 GIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGR 313 (519)
T ss_dssp TCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEECSCE
T ss_pred CCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCEEEEecCC
Confidence 57899999988887533 344443 45552 5689999999874
No 240
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=52.65 E-value=18 Score=35.50 Aligned_cols=50 Identities=18% Similarity=0.132 Sum_probs=35.2
Q ss_pred HHHHHHhc--cC-CeecCceeEEEEecCC---eeE-EE--E-cCCc--EEEcCEEEEecChh
Q 017808 104 PVINTLAK--GL-DIRLGHRVTKITRHYI---GVK-VT--V-EGGK--TFVADAVVVAVPLG 153 (365)
Q Consensus 104 ~L~~~L~~--~l-~I~l~~~V~~I~~~~~---~v~-V~--~-~~g~--~~~ad~VI~t~p~~ 153 (365)
.|.+.+.+ ++ +|+++++|.+|..+++ +|. |. . .+|+ .+.|+.||+|+-..
T Consensus 156 ~l~~~~~~~~gv~~i~~~~~v~~L~~~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~ 217 (643)
T 1jnr_A 156 IIAEAAKMAVGEENIYERVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGA 217 (643)
T ss_dssp HHHHHHHHHHCGGGEECSEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCB
T ss_pred HHHHHHHhcCCCcEEEecCEEEEEEEcCCccceeEEEEEEEecCCcEEEEEcCEEEECCCcc
Confidence 33444433 68 8999999999988766 543 33 2 4665 58999999998653
No 241
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=51.75 E-value=9.4 Score=34.30 Aligned_cols=40 Identities=20% Similarity=0.111 Sum_probs=30.0
Q ss_pred CCCEEEeccccCC-----CCcchhHHHHHHHHHHHHHHHHHHHHH
Q 017808 300 VDNLFFAGEATSM-----SYPGSVHGAFSTGLMAAEDCRMRVLER 339 (365)
Q Consensus 300 ~~~l~~aG~~~~~-----~~~g~v~gA~~SG~~aA~~i~~~l~~~ 339 (365)
+++||.+|-+..- ..+...-|-+.||++||+.|++.|..+
T Consensus 293 ~~gl~~~gm~~~~~~g~~rmgp~fg~m~~sg~~~a~~~~~~~~~~ 337 (344)
T 3jsk_A 293 VPGLIVGGMELSEIDGANRMGPTFGAMALSGVKAAHEAIRVFDLR 337 (344)
T ss_dssp ETTEEECGGGHHHHHTCEECCSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCEEEechhhHhhcCCCCCCcccceeeecCHHHHHHHHHHHHhh
Confidence 5799999988651 222355566899999999999988654
No 242
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=51.44 E-value=16 Score=33.69 Aligned_cols=38 Identities=18% Similarity=0.288 Sum_probs=30.3
Q ss_pred cCCeecCceeEEEEecCCeeEEEEcCCcEEEcCEEEEecCh
Q 017808 112 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 152 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~v~V~~~~g~~~~ad~VI~t~p~ 152 (365)
+++++ ...|+.|..+++ .|++.+|+++.+|+||+|+-.
T Consensus 73 gv~~~-~~~v~~id~~~~--~V~~~~g~~i~~d~lviAtG~ 110 (437)
T 3sx6_A 73 GIHFI-AQSAEQIDAEAQ--NITLADGNTVHYDYLMIATGP 110 (437)
T ss_dssp TCEEE-CSCEEEEETTTT--EEEETTSCEEECSEEEECCCC
T ss_pred CCEEE-EeEEEEEEcCCC--EEEECCCCEEECCEEEECCCC
Confidence 56665 468999987665 567788888999999999865
No 243
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=51.08 E-value=17 Score=33.42 Aligned_cols=43 Identities=14% Similarity=0.138 Sum_probs=34.0
Q ss_pred HhC-CCCCEEEeccccCCC----------CcchhHHHHHHHHHHHHHHHHHHHH
Q 017808 296 LRI-PVDNLFFAGEATSMS----------YPGSVHGAFSTGLMAAEDCRMRVLE 338 (365)
Q Consensus 296 l~~-p~~~l~~aG~~~~~~----------~~g~v~gA~~SG~~aA~~i~~~l~~ 338 (365)
++. ..+|+|.+||.+... .+-+.+.|+..|..+|+.|.+.+..
T Consensus 281 l~t~~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~~g~~aa~ni~~~l~g 334 (430)
T 3h28_A 281 FQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRN 334 (430)
T ss_dssp SBCSSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred ccCCCCCCEEEEEeeeccCCccCCCCCCCCCchHHHHHHHHHHHHHHHHHHhcC
Confidence 344 478999999998742 2347888999999999999998853
No 244
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=50.26 E-value=15 Score=35.29 Aligned_cols=49 Identities=18% Similarity=0.087 Sum_probs=33.9
Q ss_pred HHHHHhc--cCCeecCceeEEEEe-cCC------eeE-EEEc---CCc--EEEcCEEEEecChh
Q 017808 105 VINTLAK--GLDIRLGHRVTKITR-HYI------GVK-VTVE---GGK--TFVADAVVVAVPLG 153 (365)
Q Consensus 105 L~~~L~~--~l~I~l~~~V~~I~~-~~~------~v~-V~~~---~g~--~~~ad~VI~t~p~~ 153 (365)
|.+.+.+ +++|+++++|++|.. +++ +|. |.+. +|+ ++.|+.||+|+-..
T Consensus 144 L~~~~~~~~gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~ 207 (540)
T 1chu_A 144 LVSKALNHPNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGA 207 (540)
T ss_dssp CHHHHHHCTTEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCCC
T ss_pred HHHHHHcCCCCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCc
Confidence 3444443 578999999999987 434 443 4433 565 68999999998753
No 245
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=49.11 E-value=8.7 Score=37.05 Aligned_cols=39 Identities=26% Similarity=0.386 Sum_probs=29.4
Q ss_pred CCCCCEEEeccccCCCCc------chhHHHHHHHHHHHHHHHHHH
Q 017808 298 IPVDNLFFAGEATSMSYP------GSVHGAFSTGLMAAEDCRMRV 336 (365)
Q Consensus 298 ~p~~~l~~aG~~~~~~~~------g~v~gA~~SG~~aA~~i~~~l 336 (365)
+|+++||-||+.+...++ .++-.|+..|++|++.+.+..
T Consensus 519 ~~I~GLyAaGe~~~g~~g~~~~~g~sl~~~~v~Gr~Ag~~aa~~~ 563 (566)
T 1qo8_A 519 KPIDGLFAAGEVTGGVHGYNRLGGNAIADTVVFGRIAGDNAAKHA 563 (566)
T ss_dssp CEEEEEEECSTTBCSSSTTCCCTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEeCCEEecccccCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHh
Confidence 689999999998754221 146678999999999886543
No 246
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=47.55 E-value=8.4 Score=37.17 Aligned_cols=38 Identities=21% Similarity=0.242 Sum_probs=28.7
Q ss_pred CCCCCEEEeccccCCCCc------chhHHHHHHHHHHHHHHHHH
Q 017808 298 IPVDNLFFAGEATSMSYP------GSVHGAFSTGLMAAEDCRMR 335 (365)
Q Consensus 298 ~p~~~l~~aG~~~~~~~~------g~v~gA~~SG~~aA~~i~~~ 335 (365)
+|+++||-||+.+...++ .++-.|+..|++|++.+.+.
T Consensus 524 ~~I~GLyAaGe~~~g~~g~~~l~g~sl~~~~~fGr~Ag~~aa~~ 567 (571)
T 1y0p_A 524 QVIPGLYGAGEVTGGVHGANRLGGNAISDIITFGRLAGEEAAKY 567 (571)
T ss_dssp CEEEEEEECSTTEESSSTTSCCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcCCcEeceEcCCCCcCCCCCchHhHHHHHHHHHHHHHHHHHH
Confidence 689999999998653221 14666899999999987654
No 247
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=47.41 E-value=15 Score=35.29 Aligned_cols=44 Identities=11% Similarity=0.253 Sum_probs=32.8
Q ss_pred HHHHhc-cCCeec--CceeEEEEecCCeeEEEEcCCcEEEcCEEEEecChhh
Q 017808 106 INTLAK-GLDIRL--GHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGV 154 (365)
Q Consensus 106 ~~~L~~-~l~I~l--~~~V~~I~~~~~~v~V~~~~g~~~~ad~VI~t~p~~~ 154 (365)
.++|.+ .+++.. +++|++|.. ++ |.+.|| ++.+|.||+|+-...
T Consensus 345 ~~al~~~nV~lv~~~~~~I~~it~--~g--v~~~dG-~~~~D~IV~ATGf~~ 391 (545)
T 3uox_A 345 YETYNRDNVHLVDIREAPIQEVTP--EG--IKTADA-AYDLDVIIYATGFDA 391 (545)
T ss_dssp HHHTTSTTEEEEETTTSCEEEEET--TE--EEESSC-EEECSEEEECCCCBS
T ss_pred HHHhcCCCEEEEecCCCCceEEcc--Ce--EEeCCC-eeecCEEEECCcccc
Confidence 455554 455654 789999864 34 677899 999999999998764
No 248
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=47.31 E-value=6.4 Score=38.10 Aligned_cols=38 Identities=24% Similarity=0.331 Sum_probs=28.8
Q ss_pred CCCCCEEEeccccCCCC----cc--hhHHHHHHHHHHHHHHHHH
Q 017808 298 IPVDNLFFAGEATSMSY----PG--SVHGAFSTGLMAAEDCRMR 335 (365)
Q Consensus 298 ~p~~~l~~aG~~~~~~~----~g--~v~gA~~SG~~aA~~i~~~ 335 (365)
+|+++||-||+.+...+ .| ++-.|+..|++|++.+.+.
T Consensus 525 ~~I~GLyAaGe~~~g~~g~~~l~g~sl~~~~vfGr~Ag~~aa~~ 568 (572)
T 1d4d_A 525 KPITGLYAAGEVTGGVHGANRLGGNAISDIVTYGRIAGASAAKF 568 (572)
T ss_dssp SEEEEEEECSTTEESTTTTSCCTTHHHHHHHHHHHHHHHHHHHT
T ss_pred cccCCeeECeecccCCCCCCCCchHhHHHHHHHHHHHHHHHHHH
Confidence 68999999999865322 11 5667899999999987653
No 249
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=47.04 E-value=26 Score=32.43 Aligned_cols=37 Identities=32% Similarity=0.354 Sum_probs=29.8
Q ss_pred HhCCCCCEEEeccccCCCCcchhHHHHHHHHHHHHHHHH
Q 017808 296 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 334 (365)
Q Consensus 296 l~~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~ 334 (365)
+++..+++|.+||.+.. +...+-|+..|+.+|+.|+.
T Consensus 296 ~~t~~~~Iya~GD~~~~--~~~~~~A~~~g~~aa~~i~~ 332 (455)
T 1ebd_A 296 CRTSVPNIFAIGDIVPG--PALAHKASYEGKVAAEAIAG 332 (455)
T ss_dssp CBCSSTTEEECGGGSSS--CCCHHHHHHHHHHHHHHHTS
T ss_pred cccCCCCEEEEeccCCC--cccHHHHHHHHHHHHHHHcC
Confidence 45567899999999865 34678899999999998863
No 250
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=46.64 E-value=12 Score=35.82 Aligned_cols=39 Identities=21% Similarity=0.297 Sum_probs=29.7
Q ss_pred cCCeec--CceeEEEEecCCeeEEEEcCCcEEEcCEEEEecChhh
Q 017808 112 GLDIRL--GHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGV 154 (365)
Q Consensus 112 ~l~I~l--~~~V~~I~~~~~~v~V~~~~g~~~~ad~VI~t~p~~~ 154 (365)
.+++.. +++|++|.. ++ |.+.||+++.+|.||+|+-...
T Consensus 344 nV~lv~~~~~~I~~it~--~g--v~~~dG~~~~~DvIV~ATGf~~ 384 (540)
T 3gwf_A 344 NVEAVAIKENPIREVTA--KG--VVTEDGVLHELDVLVFATGFDA 384 (540)
T ss_dssp TEEEEETTTSCEEEECS--SE--EEETTCCEEECSEEEECCCBSC
T ss_pred CEEEEeCCCCCccEEec--Ce--EEcCCCCEEECCEEEECCccCc
Confidence 344554 688888864 34 7789999999999999998654
No 251
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=46.63 E-value=39 Score=32.61 Aligned_cols=41 Identities=22% Similarity=0.156 Sum_probs=29.6
Q ss_pred cCCeecCceeEEEEec------C---CeeEEE--EcCCcEEE--cCEEEEecCh
Q 017808 112 GLDIRLGHRVTKITRH------Y---IGVKVT--VEGGKTFV--ADAVVVAVPL 152 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~------~---~~v~V~--~~~g~~~~--ad~VI~t~p~ 152 (365)
++++++++.|++|... + +++.|+ ..+|+++. ||.||+++..
T Consensus 340 gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~D~vi~a~G~ 393 (598)
T 2x8g_A 340 GVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGR 393 (598)
T ss_dssp TCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSCEEEEEESEEEECSCE
T ss_pred CCEEEECCeEEEEEeccccccccCCCceEEEEEEeCCCcEEeccCCEEEEEeCC
Confidence 6789999988888642 2 445443 46786665 9999999864
No 252
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=46.43 E-value=18 Score=32.99 Aligned_cols=38 Identities=18% Similarity=0.263 Sum_probs=31.3
Q ss_pred cCCeecCceeEEEEecCCeeEEEEcCCcEEEcCEEEEecCh
Q 017808 112 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 152 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~v~V~~~~g~~~~ad~VI~t~p~ 152 (365)
++++++ ++|++|..... .|++.+|+++.+|++|+|+-.
T Consensus 71 ~i~~~~-~~v~~id~~~~--~v~~~~g~~~~~d~lvlAtG~ 108 (404)
T 3fg2_P 71 AIELIS-DRMVSIDREGR--KLLLASGTAIEYGHLVLATGA 108 (404)
T ss_dssp TEEEEC-CCEEEEETTTT--EEEESSSCEEECSEEEECCCE
T ss_pred CCEEEE-EEEEEEECCCC--EEEECCCCEEECCEEEEeeCC
Confidence 567888 99999987665 466788889999999999864
No 253
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=45.68 E-value=28 Score=34.33 Aligned_cols=44 Identities=14% Similarity=0.166 Sum_probs=32.8
Q ss_pred HhCCCCCEEEeccccCCCCcchhHHHHHHHHHHHHHHHHHHHHH
Q 017808 296 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVLER 339 (365)
Q Consensus 296 l~~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l~~~ 339 (365)
..+.+++||-|||....+..|...+++..|+.++..+.+.+.+.
T Consensus 448 ~~t~v~gl~a~Ge~~~~~~hg~~~~sl~~g~~ag~~a~~~~~~~ 491 (662)
T 3gyx_A 448 RMTTVEGLWTCADGVGASGHKFSSGSHAEGRIVGKQMVRWYLDH 491 (662)
T ss_dssp TBCSSBTEECCSSSBCSCCCCHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCccCCeEeCccccccccCccHhHHHHHHHHHHHHHHHHHhhC
Confidence 46779999999998764334446667778888888888776654
No 254
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=45.52 E-value=19 Score=35.37 Aligned_cols=34 Identities=29% Similarity=0.472 Sum_probs=25.9
Q ss_pred CCCEEEeccccCCCCcchhHHHHHHHHHHHHHHHHHH
Q 017808 300 VDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRV 336 (365)
Q Consensus 300 ~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l 336 (365)
++||||||+-+... |+. .|..+|..|+......+
T Consensus 384 ~~gLf~AGqinGtt--GYe-EAaaqGl~AG~nAa~~~ 417 (651)
T 3ces_A 384 IQGLFFAGQINGTT--GYE-EAAAQGLLAGLNAARLS 417 (651)
T ss_dssp SBTEEECSGGGTCC--CHH-HHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEEecCCc--ChH-HHHHHHHHHHHHHHHHh
Confidence 67999999998773 444 68888999887766443
No 255
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=45.08 E-value=30 Score=31.00 Aligned_cols=51 Identities=10% Similarity=0.111 Sum_probs=33.4
Q ss_pred HHHHHHHhc--cCCeecCceeEEEEecCC-------------------eeE-EEE------c--------CCcEEEcCEE
Q 017808 103 LPVINTLAK--GLDIRLGHRVTKITRHYI-------------------GVK-VTV------E--------GGKTFVADAV 146 (365)
Q Consensus 103 ~~L~~~L~~--~l~I~l~~~V~~I~~~~~-------------------~v~-V~~------~--------~g~~~~ad~V 146 (365)
..|.+.+.+ +++|+.++.|..+..+++ .|. |.+ . +..++.|++|
T Consensus 164 ~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i~Ak~V 243 (344)
T 3jsk_A 164 STVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTINAPVI 243 (344)
T ss_dssp HHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSSSSSCCBCEEEECSEE
T ss_pred HHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCcccccCceEEEcCEE
Confidence 444444443 567999999999987652 222 222 1 2347999999
Q ss_pred EEecChh
Q 017808 147 VVAVPLG 153 (365)
Q Consensus 147 I~t~p~~ 153 (365)
|.|+-..
T Consensus 244 V~ATG~~ 250 (344)
T 3jsk_A 244 ISTTGHD 250 (344)
T ss_dssp EECCCSS
T ss_pred EECCCCC
Confidence 9999754
No 256
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=44.83 E-value=20 Score=33.83 Aligned_cols=38 Identities=29% Similarity=0.450 Sum_probs=31.1
Q ss_pred HHhCCCCCEEEeccccCCCCcchhHHHHHHHHHHHHHHHH
Q 017808 295 RLRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 334 (365)
Q Consensus 295 ~l~~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~ 334 (365)
.+++..+++|.+||.+.. +...+.|+..|+.||+.|+.
T Consensus 300 ~~~t~~~~IyA~GD~~~~--~~~~~~A~~~g~~aa~~i~~ 337 (492)
T 3ic9_A 300 TLQTSVDHIFVAGDANNT--LTLLHEAADDGKVAGTNAGA 337 (492)
T ss_dssp TCBCSSTTEEECGGGGTS--SCSHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCCEEEEEecCCC--CccHHHHHHHHHHHHHHHcC
Confidence 345667899999999875 35788999999999998874
No 257
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=44.58 E-value=20 Score=34.33 Aligned_cols=41 Identities=17% Similarity=0.243 Sum_probs=30.4
Q ss_pred cCCeecCceeEEEEecC-CeeE-EEEcC---Cc--EEEcC-EEEEecCh
Q 017808 112 GLDIRLGHRVTKITRHY-IGVK-VTVEG---GK--TFVAD-AVVVAVPL 152 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~-~~v~-V~~~~---g~--~~~ad-~VI~t~p~ 152 (365)
+++|++++.|++|..++ +++. |.+.+ |+ ++.|+ .||+++-.
T Consensus 223 ~~~i~~~~~V~~i~~~~~~~~~GV~~~~~~~g~~~~i~A~k~VIlaaG~ 271 (546)
T 2jbv_A 223 NFTLLTGLRARQLVFDADRRCTGVDIVDSAFGHTHRLTARNEVVLSTGA 271 (546)
T ss_dssp TEEEECSCEEEEEEECTTSBEEEEEEESSTTSCEEEEEEEEEEEECSHH
T ss_pred CcEEEeCCEEEEEEECCCCeEEEEEEEECCCCcEEEEEeCccEEEecCc
Confidence 56799999999999876 5432 55433 53 68898 89998765
No 258
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=42.71 E-value=21 Score=33.27 Aligned_cols=37 Identities=14% Similarity=0.072 Sum_probs=30.2
Q ss_pred HhCCCCCEEEeccccCCCCcchhHHHHHHHHHHHHHHHH
Q 017808 296 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 334 (365)
Q Consensus 296 l~~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~ 334 (365)
+++..+++|.+||.+.. +...+.|+..|+.+|+.|+.
T Consensus 294 ~~t~~~~iya~GD~~~~--~~~~~~A~~~g~~aa~~i~g 330 (463)
T 4dna_A 294 SRTSTPGIYALGDVTDR--VQLTPVAIHEAMCFIETEYK 330 (463)
T ss_dssp CBCSSTTEEECSGGGSS--CCCHHHHHHHHHHHHHHHHS
T ss_pred CCCCCCCEEEEEecCCC--CCChHHHHHHHHHHHHHHcC
Confidence 45667899999998874 45788899999999998863
No 259
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=42.56 E-value=21 Score=33.23 Aligned_cols=37 Identities=22% Similarity=0.393 Sum_probs=30.4
Q ss_pred HhCCCCCEEEeccccCCCCcchhHHHHHHHHHHHHHHHH
Q 017808 296 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 334 (365)
Q Consensus 296 l~~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~ 334 (365)
+++..+++|.+||.+.. +...+.|+..|+.||+.|+.
T Consensus 296 ~~t~~~~Iya~GD~~~~--~~~~~~A~~~g~~aa~~i~~ 332 (466)
T 3l8k_A 296 MKTNIPNVFATGDANGL--APYYHAAVRMSIAAANNIMA 332 (466)
T ss_dssp CBCSSTTEEECGGGTCS--CCSHHHHHHHHHHHHHHHHT
T ss_pred ccCCCCCEEEEEecCCC--CccHhHHHHHHHHHHHHHhC
Confidence 45567899999998875 45788899999999998873
No 260
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=41.90 E-value=35 Score=33.58 Aligned_cols=35 Identities=11% Similarity=0.143 Sum_probs=26.5
Q ss_pred CCEEEeccccCC---CCcchhHHHHHHHHHHHHHHHHH
Q 017808 301 DNLFFAGEATSM---SYPGSVHGAFSTGLMAAEDCRMR 335 (365)
Q Consensus 301 ~~l~~aG~~~~~---~~~g~v~gA~~SG~~aA~~i~~~ 335 (365)
+|++++||+.|. ..+.+++-+++.+...|.++...
T Consensus 351 gRV~L~GDAAH~~~P~~GqG~N~gi~DA~nLawkLa~v 388 (665)
T 1pn0_A 351 ERVFIAGDACHTHSPKAGQGMNTSMMDTYNLGWKLGLV 388 (665)
T ss_dssp TTEEECGGGTEECCSTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECccccCCCcccCCcchhHHHHHHHHHHHHHH
Confidence 689999999763 33348888999888887776543
No 261
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=41.78 E-value=22 Score=33.25 Aligned_cols=37 Identities=14% Similarity=0.067 Sum_probs=29.9
Q ss_pred HhCCCCCEEEeccccCCCCcchhHHHHHHHHHHHHHHHH
Q 017808 296 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 334 (365)
Q Consensus 296 l~~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~ 334 (365)
+++..+++|.+||.+.. +...+.|+..|+.+|+.|+.
T Consensus 319 ~~t~~~~IyA~GD~~~~--~~~~~~A~~~g~~aa~~i~~ 355 (478)
T 3dk9_A 319 QNTNVKGIYAVGDVCGK--ALLTPVAIAAGRKLAHRLFE 355 (478)
T ss_dssp CBCSSTTEEECGGGGCS--SCCHHHHHHHHHHHHHHHHS
T ss_pred cccCCCCEEEEEecCCC--CccHhHHHHHHHHHHHHHcC
Confidence 34567899999998843 45788899999999998764
No 262
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=41.67 E-value=20 Score=35.05 Aligned_cols=41 Identities=12% Similarity=0.208 Sum_probs=30.1
Q ss_pred cCCeecCceeEEEEecCC--e---eEEEE-cCCc--EEEcCEEEEecCh
Q 017808 112 GLDIRLGHRVTKITRHYI--G---VKVTV-EGGK--TFVADAVVVAVPL 152 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~--~---v~V~~-~~g~--~~~ad~VI~t~p~ 152 (365)
+++|++++.|++|..+++ + |.+.. .+|+ ++.||.||+++-.
T Consensus 274 nv~v~~~~~V~~i~~~~~~~~v~GV~~~~~~~g~~~~i~A~~VIlaaG~ 322 (623)
T 3pl8_A 274 RFNLFPAVACERVVRNALNSEIESLHIHDLISGDRFEIKADVYVLTAGA 322 (623)
T ss_dssp EEEEECSEEEEEEEECTTSSCEEEEEEEETTTCCEEEECEEEEEECSCT
T ss_pred CEEEEeCCEEEEEEEECCCCEEEEEEEEEcCCCcEEEEECCEEEEcCCC
Confidence 578999999999998653 3 33433 3454 5789999999864
No 263
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=41.02 E-value=20 Score=35.77 Aligned_cols=47 Identities=15% Similarity=0.140 Sum_probs=32.5
Q ss_pred HHHHHHh-ccCCeecCceeEEEEecCCeeEEEE--cCC-cE------------------EEcCEEEEecCh
Q 017808 104 PVINTLA-KGLDIRLGHRVTKITRHYIGVKVTV--EGG-KT------------------FVADAVVVAVPL 152 (365)
Q Consensus 104 ~L~~~L~-~~l~I~l~~~V~~I~~~~~~v~V~~--~~g-~~------------------~~ad~VI~t~p~ 152 (365)
.+.+.|. ++++|++++.|++|.. +++.+.. .++ ++ +.||.||+++..
T Consensus 576 ~~~~~l~~~GV~i~~~~~v~~i~~--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~ 644 (729)
T 1o94_A 576 NMMRRLHELHVEELGDHFCSRIEP--GRMEIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGR 644 (729)
T ss_dssp HHHHHHHHTTCEEECSEEEEEEET--TEEEEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCE
T ss_pred HHHHHHHhCCCEEEcCcEEEEEEC--CeEEEEEecCCceEEecccccccccccCCcceeeeCCEEEECCCC
Confidence 3444553 3788999999999974 4555543 233 33 899999999874
No 264
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=40.91 E-value=33 Score=31.68 Aligned_cols=42 Identities=14% Similarity=0.082 Sum_probs=33.3
Q ss_pred cCCeecCceeEEEEecCCeeEEEEcC---CcEEEcCEEEEecChh
Q 017808 112 GLDIRLGHRVTKITRHYIGVKVTVEG---GKTFVADAVVVAVPLG 153 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~v~V~~~~---g~~~~ad~VI~t~p~~ 153 (365)
+++++++++|++|......+.+.... +.++.+|++|+|+-..
T Consensus 71 ~i~~~~~~~V~~id~~~~~~~~~~~~~~~~~~~~yd~lVIATGs~ 115 (437)
T 4eqs_A 71 QITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGAS 115 (437)
T ss_dssp CCEEEETEEEEEEETTTTEEEEEETTTTEEEEEECSEEEECCCEE
T ss_pred CCEEEeCCeEEEEEccCcEEEEEeccCCceEEEEcCEEEECCCCc
Confidence 67889999999999888877766432 3468899999998753
No 265
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=40.57 E-value=14 Score=34.84 Aligned_cols=50 Identities=24% Similarity=0.193 Sum_probs=35.7
Q ss_pred HHHHHHHhc----cCCeecCceeEEEEecCCeeEEEE-cCCc--EEEcCEEEEecCh
Q 017808 103 LPVINTLAK----GLDIRLGHRVTKITRHYIGVKVTV-EGGK--TFVADAVVVAVPL 152 (365)
Q Consensus 103 ~~L~~~L~~----~l~I~l~~~V~~I~~~~~~v~V~~-~~g~--~~~ad~VI~t~p~ 152 (365)
..+.+.+.+ ++++++++.|.+|...++.+.+.+ .+++ .+.+|++|+++-.
T Consensus 161 ~~~~~~l~~~l~~~v~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~d~lvlAtGa 217 (493)
T 1y56_A 161 RKVVEELVGKLNENTKIYLETSALGVFDKGEYFLVPVVRGDKLIEILAKRVVLATGA 217 (493)
T ss_dssp HHHHHHHHHTCCTTEEEETTEEECCCEECSSSEEEEEEETTEEEEEEESCEEECCCE
T ss_pred HHHHHHHHHHHhcCCEEEcCCEEEEEEcCCcEEEEEEecCCeEEEEECCEEEECCCC
Confidence 344455543 446889999999988877766554 4554 6899999999864
No 266
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=40.19 E-value=17 Score=34.41 Aligned_cols=36 Identities=28% Similarity=0.240 Sum_probs=27.4
Q ss_pred CCCCCEEEeccccCCCC----cc--hhHHHHHHHHHHHHHHH
Q 017808 298 IPVDNLFFAGEATSMSY----PG--SVHGAFSTGLMAAEDCR 333 (365)
Q Consensus 298 ~p~~~l~~aG~~~~~~~----~g--~v~gA~~SG~~aA~~i~ 333 (365)
+|+++||-||+.+...+ .+ ++-.|+..|++|++.+.
T Consensus 466 ~~I~GLyAaGe~~gg~~g~~y~~G~sl~~~~~fGr~Ag~~aa 507 (510)
T 4at0_A 466 EPIPGLFAAGRCTSGVCAGGYASGTSLGDGSFYGRRAGISAA 507 (510)
T ss_dssp SEEEEEEECGGGBCCSCSSSCCTTHHHHHHHHHHHHHHHHHH
T ss_pred CCcCCeeeceecccCCCcCCCCcHHhHHHHHHHHHHHHHHHH
Confidence 68999999999765322 21 56678999999998764
No 267
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=40.18 E-value=24 Score=32.84 Aligned_cols=37 Identities=19% Similarity=0.185 Sum_probs=30.2
Q ss_pred HhCCCCCEEEeccccCCCCcchhHHHHHHHHHHHHHHHH
Q 017808 296 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 334 (365)
Q Consensus 296 l~~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~ 334 (365)
+++..+++|.+||.+.. +...+.|+..|+.+|+.|+.
T Consensus 306 ~~t~~~~Iya~GD~~~~--~~~~~~A~~~g~~aa~~i~g 342 (476)
T 3lad_A 306 CATSVPGVYAIGDVVRG--AMLAHKASEEGVVVAERIAG 342 (476)
T ss_dssp SBCSSTTEEECGGGSSS--CCCHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCEEEEEccCCC--cccHHHHHHHHHHHHHHhcC
Confidence 45667899999999854 34788999999999998864
No 268
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=40.16 E-value=24 Score=33.06 Aligned_cols=38 Identities=11% Similarity=0.122 Sum_probs=30.2
Q ss_pred HhCCCCCEEEeccccCCCCcchhHHHHHHHHHHHHHHHHH
Q 017808 296 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMR 335 (365)
Q Consensus 296 l~~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~~ 335 (365)
+++..+++|.+||.+.. +...+.|+..|+.+|+.|+..
T Consensus 314 ~~t~~~~Iya~GD~~~~--~~~~~~A~~~g~~aa~~i~~~ 351 (484)
T 3o0h_A 314 MTTNVSHIWAVGDVTGH--IQLTPVAIHDAMCFVKNAFEN 351 (484)
T ss_dssp SBCSSTTEEECGGGGTS--CCCHHHHHHHHHHHHHHHHC-
T ss_pred CCCCCCCEEEEEecCCC--CcCHHHHHHHHHHHHHHHcCC
Confidence 34567899999998864 357888999999999988753
No 269
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=40.01 E-value=49 Score=29.29 Aligned_cols=51 Identities=8% Similarity=0.040 Sum_probs=33.2
Q ss_pred HHHHHHHhc--cCCeecCceeEEEEecC----C--eeE-EEE--------------cCCcEEEc---------------C
Q 017808 103 LPVINTLAK--GLDIRLGHRVTKITRHY----I--GVK-VTV--------------EGGKTFVA---------------D 144 (365)
Q Consensus 103 ~~L~~~L~~--~l~I~l~~~V~~I~~~~----~--~v~-V~~--------------~~g~~~~a---------------d 144 (365)
..|.+.+.+ +++|+.+++|+.+..++ + +|. |.+ .++.++.| |
T Consensus 150 ~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~~~~~~ 229 (326)
T 2gjc_A 150 STVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRDLSQKHG 229 (326)
T ss_dssp HHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CCCCCCEEEEESCCCSSSCCCSSTTCC
T ss_pred HHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecceeecccccceeccCceEEEEeeccccccccccccCC
Confidence 344444443 56799999999998763 3 332 322 14467899 9
Q ss_pred EEEEecChh
Q 017808 145 AVVVAVPLG 153 (365)
Q Consensus 145 ~VI~t~p~~ 153 (365)
.||.|+-..
T Consensus 230 ~VV~ATG~~ 238 (326)
T 2gjc_A 230 VILSTTGHD 238 (326)
T ss_dssp EEEECCCCC
T ss_pred EEEECcCCC
Confidence 999998743
No 270
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=39.84 E-value=25 Score=32.68 Aligned_cols=37 Identities=24% Similarity=0.351 Sum_probs=29.6
Q ss_pred HhCCCCCEEEeccccCCCCcchhHHHHHHHHHHHHHHHH
Q 017808 296 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 334 (365)
Q Consensus 296 l~~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~ 334 (365)
+++..+++|.+||.+.. +...+-|+..|+.+|+.|+.
T Consensus 297 ~~t~~~~IyA~GD~~~~--~~~~~~A~~~g~~aa~~i~g 333 (464)
T 2a8x_A 297 MRTNVGHIYAIGDVNGL--LQLAHVAEAQGVVAAETIAG 333 (464)
T ss_dssp SBCSSTTEEECGGGGCS--SCSHHHHHHHHHHHHHHHHT
T ss_pred CccCCCCEEEeECcCCC--ccCHHHHHHHHHHHHHHhcC
Confidence 34557899999998864 35678899999999998863
No 271
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=39.30 E-value=31 Score=33.96 Aligned_cols=50 Identities=18% Similarity=0.064 Sum_probs=35.3
Q ss_pred HHHHHHHhc---cCCeecCceeEEEEecCC---eeE-EE--E-cCCc--EEEcCEEEEecCh
Q 017808 103 LPVINTLAK---GLDIRLGHRVTKITRHYI---GVK-VT--V-EGGK--TFVADAVVVAVPL 152 (365)
Q Consensus 103 ~~L~~~L~~---~l~I~l~~~V~~I~~~~~---~v~-V~--~-~~g~--~~~ad~VI~t~p~ 152 (365)
..|.+++.+ +++|+.++.|..|..+++ +|. |. . .+|+ .+.|++||+|+--
T Consensus 170 ~~L~~~a~~~~~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG 231 (662)
T 3gyx_A 170 VIVAEAAKNALGQDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANAMVVACGG 231 (662)
T ss_dssp HHHHHHHHHHHCTTTEECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEECSEEEECCCC
T ss_pred HHHHHHHHhcCCCcEEEEceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEeCEEEECCCc
Confidence 345555544 689999999999888766 443 32 2 3553 5899999999964
No 272
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=39.25 E-value=26 Score=32.74 Aligned_cols=38 Identities=18% Similarity=0.119 Sum_probs=29.9
Q ss_pred HhCCCCCEEEeccccCCCCcchhHHHHHHHHHHHHHHHH
Q 017808 296 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 334 (365)
Q Consensus 296 l~~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~ 334 (365)
+++..+++|.+||.+... +...+.|+..|+.+|+.|+.
T Consensus 314 ~~t~~~~IyA~GD~~~~~-~~~~~~A~~~g~~aa~~i~g 351 (483)
T 3dgh_A 314 EATNVANIYAVGDIIYGK-PELTPVAVLAGRLLARRLYG 351 (483)
T ss_dssp CBCSSTTEEECSTTBTTS-CCCHHHHHHHHHHHHHHHHS
T ss_pred CccCCCCEEEEEcccCCC-CccHHHHHHHHHHHHHHHcC
Confidence 456678999999987432 35788899999999998863
No 273
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=38.96 E-value=22 Score=33.38 Aligned_cols=37 Identities=19% Similarity=0.242 Sum_probs=30.0
Q ss_pred HhCCCCCEEEeccccCCCCcchhHHHHHHHHHHHHHHHH
Q 017808 296 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 334 (365)
Q Consensus 296 l~~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~ 334 (365)
+++..+++|.+||.+.. +...+.|+..|+.+|+.|+.
T Consensus 326 ~~t~~~~IyA~GD~~~~--~~~~~~A~~~g~~aa~~i~g 362 (491)
T 3urh_A 326 FQTSIAGVYAIGDVVRG--PMLAHKAEDEGVAVAEIIAG 362 (491)
T ss_dssp CBCSSTTEEECGGGSSS--CCCHHHHHHHHHHHHHHHTT
T ss_pred CCCCCCCEEEEEecCCC--ccchhHHHHHHHHHHHHHcC
Confidence 44567899999998854 35788999999999998763
No 274
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=38.81 E-value=28 Score=32.45 Aligned_cols=37 Identities=22% Similarity=0.216 Sum_probs=30.3
Q ss_pred HhCCCCCEEEeccccCCCCcchhHHHHHHHHHHHHHHHH
Q 017808 296 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 334 (365)
Q Consensus 296 l~~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~ 334 (365)
+++..+++|.+||.+.. +...+.|+..|+.+|+.|+.
T Consensus 313 ~~t~~~~IyA~GD~~~~--~~~~~~A~~~g~~aa~~i~~ 349 (478)
T 1v59_A 313 FNSKFPHIKVVGDVTFG--PMLAHKAEEEGIAAVEMLKT 349 (478)
T ss_dssp SBCSSTTEEECGGGSSS--CCCHHHHHHHHHHHHHHHHH
T ss_pred CccCCCCEEEeeccCCC--cccHHHHHHHHHHHHHHHcC
Confidence 45667899999999874 35678899999999998874
No 275
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=38.39 E-value=28 Score=32.60 Aligned_cols=38 Identities=16% Similarity=0.176 Sum_probs=29.8
Q ss_pred HhCCCCCEEEeccccCCCCcchhHHHHHHHHHHHHHHHH
Q 017808 296 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 334 (365)
Q Consensus 296 l~~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~ 334 (365)
+++..+++|.+||.+... +...+.|+..|+.+|+.|+.
T Consensus 314 ~~t~~~~IyA~GD~~~~~-~~~~~~A~~~g~~aa~~i~g 351 (488)
T 3dgz_A 314 EATSVPHIYAIGDVAEGR-PELTPTAIKAGKLLAQRLFG 351 (488)
T ss_dssp SBCSSTTEEECGGGBTTC-CCCHHHHHHHHHHHHHHHHS
T ss_pred CccCCCCEEEeEEecCCC-CcchhHHHHHHHHHHHHHcC
Confidence 455678999999987432 34778899999999998763
No 276
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=38.20 E-value=28 Score=32.95 Aligned_cols=38 Identities=13% Similarity=0.079 Sum_probs=30.2
Q ss_pred HhCCCCCEEEeccccCCCCcchhHHHHHHHHHHHHHHHH
Q 017808 296 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 334 (365)
Q Consensus 296 l~~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~ 334 (365)
+++..+++|.+||.+... +...+.|+..|+.+|+.|+.
T Consensus 342 ~~Ts~~~IyA~GD~~~g~-~~~~~~A~~~g~~aa~~i~g 379 (519)
T 3qfa_A 342 EQTNVPYIYAIGDILEDK-VELTPVAIQAGRLLAQRLYA 379 (519)
T ss_dssp SBCSSTTEEECGGGBSSS-CCCHHHHHHHHHHHHHHHHS
T ss_pred CccCCCCEEEEEeccCCC-CccHHHHHHHHHHHHHHHcC
Confidence 456678999999998432 45788999999999998763
No 277
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=38.19 E-value=27 Score=34.15 Aligned_cols=34 Identities=26% Similarity=0.461 Sum_probs=25.0
Q ss_pred CCCEEEeccccCCCCcchhHHHHHHHHHHHHHHHHHH
Q 017808 300 VDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRV 336 (365)
Q Consensus 300 ~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l 336 (365)
++||||||+-+... |+. .|..+|..|+......+
T Consensus 389 ~~gLf~AGqinGt~--Gye-EAaaqGl~AG~nAa~~~ 422 (637)
T 2zxi_A 389 IRGLFHAGNFNGTT--GYE-EAAGQGIVAGINAALRA 422 (637)
T ss_dssp SBTEEECGGGGTBC--SHH-HHHHHHHHHHHHHHHHH
T ss_pred CCCEEEeeecCCcc--hHH-HHHHHHHHHHHHHHHHh
Confidence 67999999998762 455 56678888887665443
No 278
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=37.86 E-value=28 Score=32.60 Aligned_cols=37 Identities=14% Similarity=0.068 Sum_probs=29.8
Q ss_pred HhCCCCCEEEeccccCCCCcchhHHHHHHHHHHHHHHHH
Q 017808 296 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 334 (365)
Q Consensus 296 l~~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~ 334 (365)
+++..+++|.+||.+.. +...+-|+..|+.+|+.|+.
T Consensus 310 ~~t~~~~IyA~GD~~~~--~~~~~~A~~~g~~aa~~i~~ 346 (479)
T 2hqm_A 310 QNTNVPNIYSLGDVVGK--VELTPVAIAAGRKLSNRLFG 346 (479)
T ss_dssp CBCSSTTEEECGGGTTS--SCCHHHHHHHHHHHHHHHHS
T ss_pred CccCCCCEEEEEecCCC--cccHHHHHHHHHHHHHHhcC
Confidence 34567899999999754 35788999999999998864
No 279
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=37.57 E-value=28 Score=32.25 Aligned_cols=36 Identities=14% Similarity=0.150 Sum_probs=29.1
Q ss_pred hCCCCCEEEeccccCCCCcchhHHHHHHHHHHHHHHHH
Q 017808 297 RIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 334 (365)
Q Consensus 297 ~~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~ 334 (365)
++..+++|.+||.+.. +...+.|+..|+.+|+.|+.
T Consensus 292 ~t~~~~IyA~GD~~~~--~~~~~~A~~~g~~aa~~i~~ 327 (450)
T 1ges_A 292 NTNIEGIYAVGDNTGA--VELTPVAVAAGRRLSERLFN 327 (450)
T ss_dssp BCSSTTEEECSGGGTS--CCCHHHHHHHHHHHHHHHHT
T ss_pred ccCCCCEEEEeccCCC--CccHHHHHHHHHHHHHHHcC
Confidence 4557899999998764 34788899999999998864
No 280
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=37.33 E-value=39 Score=31.19 Aligned_cols=37 Identities=16% Similarity=0.166 Sum_probs=30.3
Q ss_pred CCEEEeccccCC---CCcchhHHHHHHHHHHHHHHHHHHH
Q 017808 301 DNLFFAGEATSM---SYPGSVHGAFSTGLMAAEDCRMRVL 337 (365)
Q Consensus 301 ~~l~~aG~~~~~---~~~g~v~gA~~SG~~aA~~i~~~l~ 337 (365)
+|+.++||+.+. ..+.+++.|+++|..+|+.+.+.+.
T Consensus 282 ~~v~lvGDAAh~~~P~~G~G~~~Ai~da~~la~~l~~~l~ 321 (453)
T 3atr_A 282 NGIIVIGDSGFTVNPVHGGGKGSAMISGYCAAKAILSAFE 321 (453)
T ss_dssp TTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCcccCCCCCccccHHHHHHHHHHHHHHHHHHHH
Confidence 689999999764 3445899999999999998877654
No 281
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=36.69 E-value=25 Score=32.76 Aligned_cols=37 Identities=19% Similarity=0.338 Sum_probs=29.8
Q ss_pred HhCCCCCEEEeccccCCCCcchhHHHHHHHHHHHHHHHH
Q 017808 296 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 334 (365)
Q Consensus 296 l~~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~ 334 (365)
+++..+++|.+||.+.. +...+.|+..|+.+|+.|+.
T Consensus 308 ~~t~~~~IyA~GD~~~~--~~~~~~A~~~g~~aa~~i~~ 344 (474)
T 1zmd_A 308 FQTKIPNIYAIGDVVAG--PMLAHKAEDEGIICVEGMAG 344 (474)
T ss_dssp CBCSSTTEEECGGGSSS--CCCHHHHHHHHHHHHHHHTT
T ss_pred CccCCCCEEEeeecCCC--CccHHHHHHHHHHHHHHhcC
Confidence 34557899999998864 35678899999999998864
No 282
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=36.26 E-value=25 Score=32.65 Aligned_cols=37 Identities=19% Similarity=0.212 Sum_probs=29.8
Q ss_pred HhCCCCCEEEeccccCCCCcchhHHHHHHHHHHHHHHHH
Q 017808 296 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 334 (365)
Q Consensus 296 l~~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~ 334 (365)
+++..+++|.+||.+.. +...+-|+..|+.||+.|+.
T Consensus 305 ~~t~~~~Iya~GD~~~~--~~~~~~A~~~g~~aa~~i~g 341 (470)
T 1dxl_A 305 FSTNVSGVYAIGDVIPG--PMLAHKAEEDGVACVEYLAG 341 (470)
T ss_dssp CBCSSTTEEECSTTSSS--CCCHHHHHHHHHHHHHHHTT
T ss_pred CccCCCCEEEEeccCCC--CccHHHHHHHHHHHHHHHcC
Confidence 45567899999998764 34678899999999998863
No 283
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=35.44 E-value=24 Score=32.63 Aligned_cols=34 Identities=21% Similarity=0.401 Sum_probs=25.1
Q ss_pred CCCEEEeccccCCCCcchhHHHHHHHHHHHHHHHHHH
Q 017808 300 VDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRV 336 (365)
Q Consensus 300 ~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l 336 (365)
++||||||+-+.. -|+. .|..+|..|+..+...+
T Consensus 328 ~~~Lf~AGqi~G~--~Gy~-eAaa~Gl~AG~naa~~~ 361 (443)
T 3g5s_A 328 AEGLYAAGVLAGV--EGYL-ESAATGFLAGLNAARKA 361 (443)
T ss_dssp EEEEEECGGGGTB--CSHH-HHHHHHHHHHHHHHHHH
T ss_pred CCCEEECcccccc--HHHH-HHHHhHHHHHHHHHHHh
Confidence 5799999999876 3444 56678888887666544
No 284
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=34.49 E-value=33 Score=32.26 Aligned_cols=37 Identities=19% Similarity=0.126 Sum_probs=29.8
Q ss_pred HhCCCCCEEEeccccCCCCcchhHHHHHHHHHHHHHHHH
Q 017808 296 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 334 (365)
Q Consensus 296 l~~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~ 334 (365)
+++..+++|.+||.+.. +...+.|+..|+.+|+.|+.
T Consensus 318 ~~t~~~~IyA~GD~~~~--~~l~~~A~~~g~~aa~~i~g 354 (495)
T 2wpf_A 318 SRTNVPNIYAIGDITDR--LMLTPVAINEGAALVDTVFG 354 (495)
T ss_dssp CBCSSTTEEECGGGGCS--CCCHHHHHHHHHHHHHHHHS
T ss_pred CccCCCCEEEEeccCCC--ccCHHHHHHHHHHHHHHhcC
Confidence 34567899999999864 35788899999999998763
No 285
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=34.43 E-value=37 Score=32.78 Aligned_cols=38 Identities=18% Similarity=0.184 Sum_probs=29.8
Q ss_pred HhCCCCCEEEeccccCCCCcchhHHHHHHHHHHHHHHHH
Q 017808 296 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 334 (365)
Q Consensus 296 l~~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~ 334 (365)
+++..+++|.+||..... +..++.|+..|+.+|+.|+.
T Consensus 421 ~~ts~~~VyA~GD~~~~~-~~~~~~A~~~g~~aa~~i~~ 458 (598)
T 2x8g_A 421 EQTTVSNVYAIGDINAGK-PQLTPVAIQAGRYLARRLFA 458 (598)
T ss_dssp SBCSSTTEEECGGGBTTS-CCCHHHHHHHHHHHHHHHHH
T ss_pred CcCCCCCEEEEeeecCCC-CccHHHHHHhHHHHHHHHhc
Confidence 445678999999985432 34788899999999998864
No 286
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=34.37 E-value=23 Score=32.16 Aligned_cols=39 Identities=15% Similarity=0.319 Sum_probs=30.4
Q ss_pred HhCCCCCEEEeccccCCC--CcchhHHHHHHHHHHHHHHHH
Q 017808 296 LRIPVDNLFFAGEATSMS--YPGSVHGAFSTGLMAAEDCRM 334 (365)
Q Consensus 296 l~~p~~~l~~aG~~~~~~--~~g~v~gA~~SG~~aA~~i~~ 334 (365)
+++..+++|.+||.+... ..+..+-|+..|+.||..|+.
T Consensus 253 ~~t~~~~IyA~GD~a~~~~~~~~~~~~A~~qg~~aa~~i~g 293 (385)
T 3klj_A 253 METSIKDIYACGDVAEFYGKNPGLINIANKQGEVAGLNACG 293 (385)
T ss_dssp CBCSSTTEEECGGGEEETTBCCCCHHHHHHHHHHHHHHHTT
T ss_pred cccCCCCEEEEEeeEecCCCcccHHHHHHHHHHHHHHHhcC
Confidence 455678999999987631 245788899999999998864
No 287
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=34.28 E-value=33 Score=32.15 Aligned_cols=37 Identities=19% Similarity=0.184 Sum_probs=30.0
Q ss_pred HhCCCCCEEEeccccCCCCcchhHHHHHHHHHHHHHHHH
Q 017808 296 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 334 (365)
Q Consensus 296 l~~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~ 334 (365)
+++..+++|.+||.+.. +...+.|+..|+.+|+.|+.
T Consensus 314 ~~t~~~~IyA~GD~~~~--~~l~~~A~~~g~~aa~~i~g 350 (490)
T 1fec_A 314 SKTNVDNIYAIGDVTDR--VMLTPVAINEGAAFVDTVFA 350 (490)
T ss_dssp CBCSSTTEEECGGGGCS--CCCHHHHHHHHHHHHHHHHS
T ss_pred CccCCCCEEEEeccCCC--ccCHHHHHHHHHHHHHHhcC
Confidence 44567899999999864 35788999999999998763
No 288
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=33.89 E-value=44 Score=34.57 Aligned_cols=42 Identities=24% Similarity=0.328 Sum_probs=30.6
Q ss_pred ccCCeecCceeEEEEec-CCee-EEEEcC-------C--cEEEcCEEEEecCh
Q 017808 111 KGLDIRLGHRVTKITRH-YIGV-KVTVEG-------G--KTFVADAVVVAVPL 152 (365)
Q Consensus 111 ~~l~I~l~~~V~~I~~~-~~~v-~V~~~~-------g--~~~~ad~VI~t~p~ 152 (365)
.+++|++++.|++|... ++++ .|+..+ | +++.||.||+++..
T Consensus 329 ~GV~v~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~ 381 (965)
T 2gag_A 329 DGVQVISGSVVVDTEADENGELSAIVVAELDEARELGGTQRFEADVLAVAGGF 381 (965)
T ss_dssp TTCCEEETEEEEEEEECTTSCEEEEEEEEECTTCCEEEEEEEECSEEEEECCE
T ss_pred CCeEEEeCCEeEEEeccCCCCEEEEEEEeccccCCCCceEEEEcCEEEECCCc
Confidence 37889999999999874 3433 243332 4 67999999999863
No 289
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=33.74 E-value=30 Score=32.13 Aligned_cols=38 Identities=18% Similarity=0.228 Sum_probs=29.8
Q ss_pred HhCCCCCEEEeccccCCCCcchhHHHHHHHHHHHHHHHH
Q 017808 296 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 334 (365)
Q Consensus 296 l~~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~ 334 (365)
+++..+++|.+||.... .+...+-|+..|+.+|+.|+.
T Consensus 302 ~~t~~~~IyA~GD~~~~-~~~~~~~A~~~g~~aa~~i~~ 339 (468)
T 2qae_A 302 FETSIPDVYAIGDVVDK-GPMLAHKAEDEGVACAEILAG 339 (468)
T ss_dssp SBCSSTTEEECGGGBSS-SCSCHHHHHHHHHHHHHHHTT
T ss_pred cccCCCCEEEeeccCCC-CCccHhHHHHHHHHHHHHHcC
Confidence 34557899999999872 235788899999999998763
No 290
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=33.55 E-value=31 Score=31.05 Aligned_cols=38 Identities=18% Similarity=0.049 Sum_probs=29.5
Q ss_pred cCCeecCceeEEEEecCCeeEEEEcCCcEEEcCEEEEecCh
Q 017808 112 GLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPL 152 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~~v~V~~~~g~~~~ad~VI~t~p~ 152 (365)
+++++++++|+.|...+.. |++.+ .++.+|++|+|+-.
T Consensus 74 ~v~~~~~~~v~~i~~~~~~--v~~~~-~~~~~d~lviAtG~ 111 (384)
T 2v3a_A 74 NARILTHTRVTGIDPGHQR--IWIGE-EEVRYRDLVLAWGA 111 (384)
T ss_dssp TCEEECSCCCCEEEGGGTE--EEETT-EEEECSEEEECCCE
T ss_pred CcEEEeCCEEEEEECCCCE--EEECC-cEEECCEEEEeCCC
Confidence 5678889999999876554 44444 47999999999875
No 291
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=33.41 E-value=36 Score=31.64 Aligned_cols=36 Identities=19% Similarity=0.108 Sum_probs=28.9
Q ss_pred hCCCCCEEEeccccCCCCcchhHHHHHHHHHHHHHHHH
Q 017808 297 RIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 334 (365)
Q Consensus 297 ~~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~ 334 (365)
++..+++|.+||.+.. +...+.|+..|+.+|+.|+.
T Consensus 291 ~t~~~~Iya~GD~~~~--~~~~~~A~~~g~~aa~~i~g 326 (463)
T 2r9z_A 291 NTNVPGVYALGDITGR--DQLTPVAIAAGRRLAERLFD 326 (463)
T ss_dssp BCSSTTEEECGGGGTS--CCCHHHHHHHHHHHHHHHHS
T ss_pred ccCCCCEEEEeecCCC--cccHHHHHHHHHHHHHHHcC
Confidence 4456899999999764 35788899999999998763
No 292
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=33.37 E-value=38 Score=32.87 Aligned_cols=40 Identities=25% Similarity=0.335 Sum_probs=29.1
Q ss_pred hCCCCCEEEeccccCC-CC------cchhHHHHHHHHHHHHHHHHHH
Q 017808 297 RIPVDNLFFAGEATSM-SY------PGSVHGAFSTGLMAAEDCRMRV 336 (365)
Q Consensus 297 ~~p~~~l~~aG~~~~~-~~------~g~v~gA~~SG~~aA~~i~~~l 336 (365)
+.|+++||-|||.... .+ ..++-.|+..|++|++.+.+.+
T Consensus 369 ~~~IpGLyAaGe~a~~g~hGanrl~gnsl~~~~vfGr~Ag~~aa~~~ 415 (602)
T 1kf6_A 369 ETRIKGLFAVGECSSVGLHGANRLGSNSLAELVVFGRLAGEQATERA 415 (602)
T ss_dssp BCSSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCEEEccccccccccCCCCCccHHHHHHHHHHHHHHHHHHHhh
Confidence 3489999999997532 11 1246678889999999887665
No 293
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=33.12 E-value=31 Score=32.25 Aligned_cols=37 Identities=30% Similarity=0.506 Sum_probs=29.7
Q ss_pred HhCCCCCEEEeccccCCCCcchhHHHHHHHHHHHHHHHH
Q 017808 296 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 334 (365)
Q Consensus 296 l~~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~ 334 (365)
+++..+++|.+||.+.. +...+-|+..|+.+|+.|+.
T Consensus 312 ~~t~~~~IyA~GD~~~~--~~l~~~A~~~g~~aa~~i~g 348 (482)
T 1ojt_A 312 MRTNVPHIYAIGDIVGQ--PMLAHKAVHEGHVAAENCAG 348 (482)
T ss_dssp SBCSSTTEEECGGGTCS--SCCHHHHHHHHHHHHHHHTT
T ss_pred cccCCCCEEEEEcccCC--CccHHHHHHHHHHHHHHHcC
Confidence 44567899999999864 35678899999999998763
No 294
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=33.11 E-value=31 Score=32.09 Aligned_cols=37 Identities=30% Similarity=0.315 Sum_probs=29.7
Q ss_pred HhCCCCCEEEeccccCCCCcchhHHHHHHHHHHHHHHHH
Q 017808 296 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 334 (365)
Q Consensus 296 l~~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~ 334 (365)
+++..+++|.+||.+.. +...+.|+..|+.+|..|+.
T Consensus 297 ~~t~~~~iya~GD~~~~--~~~~~~A~~~g~~aa~~i~~ 333 (467)
T 1zk7_A 297 MRTSNPNIYAAGDCTDQ--PQFVYVAAAAGTRAAINMTG 333 (467)
T ss_dssp CBCSSTTEEECSTTBSS--CCCHHHHHHHHHHHHHHHTT
T ss_pred cccCCCCEEEEeccCCC--cccHHHHHHHHHHHHHHHcC
Confidence 44567899999998875 34688899999999998763
No 295
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=32.69 E-value=32 Score=32.02 Aligned_cols=37 Identities=30% Similarity=0.447 Sum_probs=29.4
Q ss_pred HhCCCCCEEEeccccCCCCcchhHHHHHHHHHHHHHHHH
Q 017808 296 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 334 (365)
Q Consensus 296 l~~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~ 334 (365)
+++..+++|.+||.+.. +...+-|+..|+.+|+.|+.
T Consensus 297 ~~t~~~~Iya~GD~~~~--~~l~~~A~~~g~~aa~~i~g 333 (464)
T 2eq6_A 297 METSVPGVYAIGDAARP--PLLAHKAMREGLIAAENAAG 333 (464)
T ss_dssp CBCSSTTEEECGGGTCS--SCCHHHHHHHHHHHHHHHTT
T ss_pred cccCCCCEEEEeccCCC--cccHHHHHHHHHHHHHHhcC
Confidence 34556899999999865 35678899999999998763
No 296
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=32.63 E-value=39 Score=33.21 Aligned_cols=40 Identities=28% Similarity=0.280 Sum_probs=28.6
Q ss_pred CCCCCEEEeccccC-CCC------cchhHHHHHHHHHHHHHHHHHHH
Q 017808 298 IPVDNLFFAGEATS-MSY------PGSVHGAFSTGLMAAEDCRMRVL 337 (365)
Q Consensus 298 ~p~~~l~~aG~~~~-~~~------~g~v~gA~~SG~~aA~~i~~~l~ 337 (365)
.|+++||-|||... ..+ ..++-.|+..|++|++.+.+...
T Consensus 383 v~IpGLYAaGE~a~~g~hGanrlggnsL~~~~vfGr~Ag~~aa~~~~ 429 (660)
T 2bs2_A 383 AKLKGLFSAGEAACWDMHGFNRLGGNSVSEAVVAGMIVGEYFAEHCA 429 (660)
T ss_dssp CSSBTEEECGGGEECCSSTTCCCTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eecCCEEeccccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHhh
Confidence 48999999999642 111 12466688999999998876543
No 297
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=32.59 E-value=45 Score=32.18 Aligned_cols=42 Identities=21% Similarity=0.264 Sum_probs=33.5
Q ss_pred cCCeecCceeEEEEecCC-eeE-EEEc------CC---------cEEEcCEEEEecChh
Q 017808 112 GLDIRLGHRVTKITRHYI-GVK-VTVE------GG---------KTFVADAVVVAVPLG 153 (365)
Q Consensus 112 ~l~I~l~~~V~~I~~~~~-~v~-V~~~------~g---------~~~~ad~VI~t~p~~ 153 (365)
+++|+++++|++|..+++ .|. |++. +| .++.||.||.|.-..
T Consensus 158 Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~ 216 (584)
T 2gmh_A 158 GVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCH 216 (584)
T ss_dssp TCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTT
T ss_pred CCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCC
Confidence 578999999999998765 454 7765 33 579999999998764
No 298
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=32.27 E-value=37 Score=29.05 Aligned_cols=43 Identities=16% Similarity=0.228 Sum_probs=29.1
Q ss_pred ChHHHHHHHhccCCeecCceeEEEEecCCe-----eEEEEcCCcEEEcCEEEEecCh
Q 017808 101 GYLPVINTLAKGLDIRLGHRVTKITRHYIG-----VKVTVEGGKTFVADAVVVAVPL 152 (365)
Q Consensus 101 G~~~L~~~L~~~l~I~l~~~V~~I~~~~~~-----v~V~~~~g~~~~ad~VI~t~p~ 152 (365)
||++|...+.+ .++.+|.+|+.-+++ ++|++.||+. ||+=+++
T Consensus 1 g~~~v~a~~~~----l~G~~v~~v~~~g~G~~~~vyrv~l~DG~~-----~~vK~~~ 48 (288)
T 3f7w_A 1 GVNSVAARVTE----LTGREVAAVAERGHSHRWHLYRVELADGTP-----LFVKALP 48 (288)
T ss_dssp CCHHHHHHHHH----HHCCCEEEEEEEEEETTEEEEEEEETTSCE-----EEEEECC
T ss_pred ChHHHHHHHHH----hcCCCeEEEEecCCCCCeEEEEEEECCCCE-----EEEEEeC
Confidence 67888877775 566778888765433 6798999953 4555544
No 299
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=31.91 E-value=32 Score=32.29 Aligned_cols=37 Identities=19% Similarity=0.129 Sum_probs=29.6
Q ss_pred HhCCCCCEEEeccccCCCCcchhHHHHHHHHHHHHHHHH
Q 017808 296 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 334 (365)
Q Consensus 296 l~~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~ 334 (365)
+++..+++|.+||.+.. +...+-|+..|+.+|+.|+.
T Consensus 305 ~~t~~~~IyA~GD~~~~--~~l~~~A~~~g~~aa~~i~g 341 (499)
T 1xdi_A 305 SRTLATGIYAAGDCTGL--LPLASVAAMQGRIAMYHALG 341 (499)
T ss_dssp SBCSSTTEEECSGGGTS--CSCHHHHHHHHHHHHHHHTT
T ss_pred cccCCCCEEEEeccCCC--cccHHHHHHHHHHHHHHhcC
Confidence 44567899999999865 34678899999999998763
No 300
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=31.31 E-value=44 Score=30.84 Aligned_cols=37 Identities=27% Similarity=0.352 Sum_probs=29.8
Q ss_pred HhCCCCCEEEeccccCCCCcchhHHHHHHHHHHHHHHHH
Q 017808 296 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 334 (365)
Q Consensus 296 l~~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~ 334 (365)
+++..+++|.+||.+.. +...+.|...|+.+|+.|+.
T Consensus 290 ~~t~~~~iya~GD~~~~--~~~~~~A~~~g~~aa~~i~~ 326 (455)
T 2yqu_A 290 LRTRVPHIYAIGDVVRG--PMLAHKASEEGIAAVEHMVR 326 (455)
T ss_dssp SBCSSTTEEECGGGSSS--CCCHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCEEEEecCCCC--ccCHHHHHHhHHHHHHHHcC
Confidence 34556899999998865 35678899999999998874
No 301
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=31.19 E-value=44 Score=31.86 Aligned_cols=37 Identities=11% Similarity=-0.050 Sum_probs=26.4
Q ss_pred CCCEEEeccccCCCCcc--hhHHHHHHHHHHHHHHHHHH
Q 017808 300 VDNLFFAGEATSMSYPG--SVHGAFSTGLMAAEDCRMRV 336 (365)
Q Consensus 300 ~~~l~~aG~~~~~~~~g--~v~gA~~SG~~aA~~i~~~l 336 (365)
+.||+.+..++.|.-.+ ..-.++.=|.++|+.|++..
T Consensus 479 v~nLrVvDaSv~P~~~~~np~~t~~aiAer~A~~ii~~~ 517 (536)
T 1ju2_A 479 INALRVVDGSTFPYTPASHPQGFYLMLGRYVGIKILQER 517 (536)
T ss_dssp CBTEEECSGGGCSSCSSSSCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEeecccCCCCCCcchHHHHHHHHHHHHHHHHHhh
Confidence 56999999999884333 34446667888888877653
No 302
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=31.01 E-value=35 Score=32.34 Aligned_cols=36 Identities=22% Similarity=0.275 Sum_probs=29.0
Q ss_pred hCCCCCEEEeccccCCCCcchhHHHHHHHHHHHHHHHH
Q 017808 297 RIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 334 (365)
Q Consensus 297 ~~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~ 334 (365)
++..+++|.+||.+.. +...+.|+..|+.+|+.|+.
T Consensus 342 ~t~~~~IyA~GD~~~~--~~~~~~A~~~g~~aa~~i~g 377 (523)
T 1mo9_A 342 QTSVPNVYAVGDLIGG--PMEMFKARKSGCYAARNVMG 377 (523)
T ss_dssp BCSSTTEEECGGGGCS--SCSHHHHHHHHHHHHHHHTT
T ss_pred ccCCCCEEEEeecCCC--cccHHHHHHHHHHHHHHHcC
Confidence 3456799999999865 35788899999999998763
No 303
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=29.85 E-value=33 Score=31.67 Aligned_cols=36 Identities=19% Similarity=0.255 Sum_probs=25.2
Q ss_pred eecCceeEEEEecCCeeEEEEcCCcE-EEcCEEEEecCh
Q 017808 115 IRLGHRVTKITRHYIGVKVTVEGGKT-FVADAVVVAVPL 152 (365)
Q Consensus 115 I~l~~~V~~I~~~~~~v~V~~~~g~~-~~ad~VI~t~p~ 152 (365)
|.++..|++|..+++ .|++.||+. +.+|.||+++..
T Consensus 254 i~~~~~v~~~~~~~~--~v~~~dG~~~~~~D~vi~atG~ 290 (447)
T 2gv8_A 254 LQQVPEITKFDPTTR--EIYLKGGKVLSNIDRVIYCTGY 290 (447)
T ss_dssp EEEECCEEEEETTTT--EEEETTTEEECCCSEEEECCCB
T ss_pred eEEecCeEEEecCCC--EEEECCCCEeccCCEEEECCCC
Confidence 445566777754433 466778976 689999999864
No 304
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=29.30 E-value=39 Score=31.33 Aligned_cols=37 Identities=24% Similarity=0.305 Sum_probs=29.6
Q ss_pred HhCCCCCEEEeccccCCCCcchhHHHHHHHHHHHHHHHH
Q 017808 296 LRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRM 334 (365)
Q Consensus 296 l~~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~ 334 (365)
+++..+++|.+||.+.. +...+.|...|+.+|+.|+.
T Consensus 293 ~~t~~~~Iya~GD~~~~--~~~~~~A~~~g~~aa~~i~g 329 (458)
T 1lvl_A 293 CQTSMHNVWAIGDVAGE--PMLAHRAMAQGEMVAEIIAG 329 (458)
T ss_dssp CBCSSTTEEECGGGGCS--SCCHHHHHHHHHHHHHHHTT
T ss_pred CcCCCCCEEEeeccCCC--cccHHHHHHHHHHHHHHhcC
Confidence 44556899999999875 35678899999999998763
No 305
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=28.77 E-value=41 Score=32.17 Aligned_cols=37 Identities=14% Similarity=0.355 Sum_probs=28.2
Q ss_pred CCee--cCceeEEEEecCCeeEEEEcCCcEEEcCEEEEecChhh
Q 017808 113 LDIR--LGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGV 154 (365)
Q Consensus 113 l~I~--l~~~V~~I~~~~~~v~V~~~~g~~~~ad~VI~t~p~~~ 154 (365)
+++. ...+|++|.. ++ |.+.+| ++.+|.||+|+-...
T Consensus 358 V~lvd~~~~~I~~it~--~g--v~~~dG-~~~~D~iI~ATGf~~ 396 (549)
T 4ap3_A 358 VELVDLRSTPIVGMDE--TG--IVTTGA-HYDLDMIVLATGFDA 396 (549)
T ss_dssp EEEEETTTSCEEEEET--TE--EEESSC-EEECSEEEECCCEEE
T ss_pred EEEEeCCCCCceEEeC--Cc--EEeCCC-ceecCEEEECCcccc
Confidence 4444 3578888874 34 667899 999999999998764
No 306
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=28.65 E-value=27 Score=33.78 Aligned_cols=39 Identities=21% Similarity=0.141 Sum_probs=28.5
Q ss_pred CCCCEEEeccccC-CCC------cchhHHHHHHHHHHHHHHHHHHH
Q 017808 299 PVDNLFFAGEATS-MSY------PGSVHGAFSTGLMAAEDCRMRVL 337 (365)
Q Consensus 299 p~~~l~~aG~~~~-~~~------~g~v~gA~~SG~~aA~~i~~~l~ 337 (365)
|+++||-|||... ..+ ..++-.|+..|++|++.+.+...
T Consensus 379 ~I~GLyAaGe~a~~g~hG~nrl~gnsl~~~~vfG~~Ag~~aa~~~~ 424 (588)
T 2wdq_A 379 VVPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGLHLQESIA 424 (588)
T ss_dssp EEEEEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHHHHTHHHHHH
T ss_pred eeCCceeCccccccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhh
Confidence 7999999999643 111 12466789999999998876654
No 307
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=27.32 E-value=30 Score=33.76 Aligned_cols=39 Identities=23% Similarity=0.137 Sum_probs=28.5
Q ss_pred CCCCCEEEeccccC-CCC------cchhHHHHHHHHHHHHHHHHHH
Q 017808 298 IPVDNLFFAGEATS-MSY------PGSVHGAFSTGLMAAEDCRMRV 336 (365)
Q Consensus 298 ~p~~~l~~aG~~~~-~~~------~g~v~gA~~SG~~aA~~i~~~l 336 (365)
+|+++||-|||... ..+ ..++-.|+..|++|++.+.+..
T Consensus 387 t~IpGLyAaGE~a~~g~hGanrlggnsL~~~~vfGr~Ag~~aa~~~ 432 (621)
T 2h88_A 387 KVVPGLYACGEAASASVHGANRLGANSLLDLVVFGRACALTIAETC 432 (621)
T ss_dssp EEEEEEEECGGGEECSSSTTSCCTTSHHHHHHHHHHHHHHHHHHHC
T ss_pred cccCceEEccccccccccCCCCCchHhHHHHHHHHHHHHHHHHHhh
Confidence 67999999999743 111 1256778999999999876543
No 308
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=26.72 E-value=60 Score=30.12 Aligned_cols=42 Identities=17% Similarity=0.172 Sum_probs=29.2
Q ss_pred ccCCeecCceeEEEEecCC--eeEEEE--------------cCC--cEEEcCEEEEecCh
Q 017808 111 KGLDIRLGHRVTKITRHYI--GVKVTV--------------EGG--KTFVADAVVVAVPL 152 (365)
Q Consensus 111 ~~l~I~l~~~V~~I~~~~~--~v~V~~--------------~~g--~~~~ad~VI~t~p~ 152 (365)
++++|++++.|.+|..++. ++.+.. .+| +++.||.||+++..
T Consensus 265 ~gv~i~~~~~~~~i~~~~~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~ 324 (456)
T 1lqt_A 265 RRMVFRFLTSPIEIKGKRKVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGY 324 (456)
T ss_dssp EEEEEECSEEEEEEECSSSCCEEEEEEEEEEECSSSSEEEEEEEEEEEEECSEEEECSCE
T ss_pred ceEEEEeCCCCeEEecCCcEeEEEEEEEEecCCCcccccccCCCceEEEEcCEEEEcccc
Confidence 3578999999999986532 233321 134 46899999999874
No 309
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=25.56 E-value=51 Score=30.67 Aligned_cols=38 Identities=11% Similarity=0.162 Sum_probs=30.8
Q ss_pred CCCEEEeccccCCCCcchhHHHHHHHHHHHHHHHHHHHH
Q 017808 300 VDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVLE 338 (365)
Q Consensus 300 ~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l~~ 338 (365)
++++|.+|+-... ..+.+..|+..|..+|+.|+..+..
T Consensus 359 ~p~vya~Gd~~~g-~~~~i~~a~~~g~~aa~~i~~~l~~ 396 (460)
T 1cjc_A 359 VPGLYCSGWVKRG-PTGVITTTMTDSFLTGQILLQDLKA 396 (460)
T ss_dssp CTTEEECTHHHHC-TTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCcC-CCccHHHHHHHHHHHHHHHHHHHHh
Confidence 5799999998753 2345778999999999999988764
No 310
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=25.44 E-value=50 Score=30.75 Aligned_cols=42 Identities=7% Similarity=0.134 Sum_probs=29.3
Q ss_pred ccCCeecCceeEEEEecC-C-eeE-EEEc---------------CC--cEEEcCEEEEecCh
Q 017808 111 KGLDIRLGHRVTKITRHY-I-GVK-VTVE---------------GG--KTFVADAVVVAVPL 152 (365)
Q Consensus 111 ~~l~I~l~~~V~~I~~~~-~-~v~-V~~~---------------~g--~~~~ad~VI~t~p~ 152 (365)
.+++|++++.+.+|..++ + .+. |++. +| +++.||.||+++..
T Consensus 270 ~gv~~~~~~~~~~i~~~~~~~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~ 331 (460)
T 1cjc_A 270 RAWGLRFFRSPQQVLPSPDGRRAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGY 331 (460)
T ss_dssp EEEEEECSEEEEEEEECTTSSSEEEEEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCCE
T ss_pred ceEEEECCCChheEEcCCCCceEEEEEEEEEEEccccCCCcccCCCceEEEEcCEEEECCCC
Confidence 457899999999998763 3 332 3221 34 57899999999864
No 311
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=24.85 E-value=62 Score=31.23 Aligned_cols=37 Identities=8% Similarity=0.001 Sum_probs=27.1
Q ss_pred CCCEEEeccccCCCCcc--hhHHHHHHHHHHHHHHHHHH
Q 017808 300 VDNLFFAGEATSMSYPG--SVHGAFSTGLMAAEDCRMRV 336 (365)
Q Consensus 300 ~~~l~~aG~~~~~~~~g--~v~gA~~SG~~aA~~i~~~l 336 (365)
+.||+.+..++.|...+ +.--++.-|.+||+.|++..
T Consensus 541 v~~LrVvDaSv~P~~~~~n~~~t~~aiaeraAd~I~~~~ 579 (583)
T 3qvp_A 541 VQGLRVIDGSIPPTQMSSHVMTVFYAMALKISDAILEDY 579 (583)
T ss_dssp CBSEEECSTTCCSSCCSSCSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEeecccCCCCCCcCcHHHHHHHHHHHHHHHHHhh
Confidence 57999999998884332 34445677889999887754
No 312
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=24.81 E-value=37 Score=29.10 Aligned_cols=38 Identities=11% Similarity=0.063 Sum_probs=29.1
Q ss_pred CCCEEEeccccCC-----CCcchhHHHHHHHHHHHHHHHHHHH
Q 017808 300 VDNLFFAGEATSM-----SYPGSVHGAFSTGLMAAEDCRMRVL 337 (365)
Q Consensus 300 ~~~l~~aG~~~~~-----~~~g~v~gA~~SG~~aA~~i~~~l~ 337 (365)
.+++|.+|+.+.. ....+..+++.||..+|..|.+.|.
T Consensus 233 ~p~i~a~G~~~~~~~g~~~~gp~~~~~~~sG~~~a~~i~~~l~ 275 (284)
T 1rp0_A 233 VPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAGQLALKALG 275 (284)
T ss_dssp ETTEEECTHHHHHHHTCEECCSCCHHHHHHHHHHHHHHHHHTT
T ss_pred cCCEEEEeeehhhhcCCCCcChHHHHHHHhHHHHHHHHHHHhh
Confidence 4799999987531 1223678899999999999998764
No 313
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=23.62 E-value=57 Score=30.27 Aligned_cols=40 Identities=8% Similarity=-0.030 Sum_probs=31.2
Q ss_pred CCCCEEEeccccCCCCcchhHHHHHHHHHHHHHHHHHHHHH
Q 017808 299 PVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVLER 339 (365)
Q Consensus 299 p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l~~~ 339 (365)
.++++|.+|+..... .+.+..|+..|..+|+.|+..+...
T Consensus 350 ~~pgvya~GD~~~gp-~~~i~~a~~~g~~~a~~i~~~l~~~ 389 (456)
T 1lqt_A 350 GSPNEYVVGWIKRGP-TGVIGTNKKDAQDTVDTLIKNLGNA 389 (456)
T ss_dssp TCSSEEECTHHHHCS-CSCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeccCCCC-chhHHHHHHHHHHHHHHHHHHHHhC
Confidence 467999999987542 3456678999999999999887654
No 314
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=23.52 E-value=65 Score=30.36 Aligned_cols=36 Identities=17% Similarity=0.224 Sum_probs=31.1
Q ss_pred CCCEEEeccccCCCCcchhHHHHHHHHHHHHHHHHH
Q 017808 300 VDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMR 335 (365)
Q Consensus 300 ~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~~ 335 (365)
.+++|-+||......+.+.+-|...|..+|+.|.+.
T Consensus 364 ~~~IfAiGD~a~~~~p~~a~~A~qqg~~~A~ni~~~ 399 (502)
T 4g6h_A 364 SNNIFAIGDNAFAGLPPTAQVAHQEAEYLAKNFDKM 399 (502)
T ss_dssp CSSEEECGGGEESSSCCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEcccCCCCCCchHHHHHHHHHHHHHHHHH
Confidence 579999999877667788999999999999998753
No 315
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=23.34 E-value=98 Score=27.42 Aligned_cols=36 Identities=22% Similarity=0.428 Sum_probs=28.3
Q ss_pred CCEEEeccccCC---CCcchhHHHHHHHHHHHHHHHHHH
Q 017808 301 DNLFFAGEATSM---SYPGSVHGAFSTGLMAAEDCRMRV 336 (365)
Q Consensus 301 ~~l~~aG~~~~~---~~~g~v~gA~~SG~~aA~~i~~~l 336 (365)
+|+.++||+.+. ..+.+++-|+.+|..+|+.|.+.+
T Consensus 277 ~~v~liGDAa~~~~P~~G~G~~~a~~~a~~la~~l~~~~ 315 (397)
T 3cgv_A 277 PGLMLVGDAARLIDPITGGGIANAIVSGMYAAQVTKEAI 315 (397)
T ss_dssp TTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEccccCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 689999999764 233588899999999998877644
No 316
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=23.28 E-value=74 Score=30.66 Aligned_cols=36 Identities=14% Similarity=0.194 Sum_probs=26.0
Q ss_pred CCCEEEeccccCCCCcc--hhHHHHHHHHHHHHHHHHH
Q 017808 300 VDNLFFAGEATSMSYPG--SVHGAFSTGLMAAEDCRMR 335 (365)
Q Consensus 300 ~~~l~~aG~~~~~~~~g--~v~gA~~SG~~aA~~i~~~ 335 (365)
+.||+.+..++.|...+ +.--++.-|.+||+.|++.
T Consensus 535 v~~LrVvDaSv~P~~~~~n~~a~~~~iaekaAd~I~~~ 572 (577)
T 3q9t_A 535 IKKLRVADASVIPIIPDCRIQNSVYAVGEKCADMIKAE 572 (577)
T ss_dssp CBSEEECSGGGCSSCCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEeecccccCCCCCccHHHHHHHHHHHHHHHHhh
Confidence 57999999998874333 3444667788888887754
No 317
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=22.54 E-value=79 Score=29.28 Aligned_cols=31 Identities=10% Similarity=0.144 Sum_probs=22.7
Q ss_pred ceeEEEEecCCeeEEEEcCCcEEEcCEEEEecChh
Q 017808 119 HRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLG 153 (365)
Q Consensus 119 ~~V~~I~~~~~~v~V~~~~g~~~~ad~VI~t~p~~ 153 (365)
..|++|. +++ |+..||+++.+|.||+++...
T Consensus 245 ~~V~~i~--~~~--V~~~dG~~i~~D~Vi~atG~~ 275 (464)
T 2xve_A 245 PNLVRVD--TEN--AYFADGSSEKVDAIILCTGYI 275 (464)
T ss_dssp SCEEEEC--SSE--EEETTSCEEECSEEEECCCBC
T ss_pred CCeEEEe--CCE--EEECCCCEEeCCEEEECCCCC
Confidence 4566663 333 667799999999999999753
No 318
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=22.24 E-value=1.4e+02 Score=31.02 Aligned_cols=41 Identities=17% Similarity=0.032 Sum_probs=29.3
Q ss_pred ccCCeecCceeEEEEecCCeeE-EEEc------CC---------cEEEcCEEEEecC
Q 017808 111 KGLDIRLGHRVTKITRHYIGVK-VTVE------GG---------KTFVADAVVVAVP 151 (365)
Q Consensus 111 ~~l~I~l~~~V~~I~~~~~~v~-V~~~------~g---------~~~~ad~VI~t~p 151 (365)
+++++++++.|.+|...+++|. |++. +| .++.||.||+++.
T Consensus 383 ~Gv~~~~~~~~~~i~~~~g~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G 439 (1025)
T 1gte_A 383 EKCEFLPFLSPRKVIVKGGRIVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFG 439 (1025)
T ss_dssp TTCEEECSEEEEEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSC
T ss_pred cCCEEEeCCCceEEEccCCeEEEEEEEEeEEcCCCCcccCCCceEEEECCEEEECCC
Confidence 4778999999999986555543 4331 22 3689999999974
No 319
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=21.83 E-value=88 Score=27.79 Aligned_cols=34 Identities=12% Similarity=0.157 Sum_probs=26.8
Q ss_pred CCEEEeccccCC---CCcchhHHHHHHHHHHHHHHHH
Q 017808 301 DNLFFAGEATSM---SYPGSVHGAFSTGLMAAEDCRM 334 (365)
Q Consensus 301 ~~l~~aG~~~~~---~~~g~v~gA~~SG~~aA~~i~~ 334 (365)
++++++||+.|. ..+.+++-|++.+...|+.|..
T Consensus 311 grv~LiGDAAH~~~P~~GqG~n~ai~DA~~La~~L~~ 347 (412)
T 4hb9_A 311 STVTLLGDAIHNMTPMTGSGANTALRDALLLTQKLAS 347 (412)
T ss_dssp CSEEECTHHHHCSSCCSSSHHHHHHHHHHHHHHHHHH
T ss_pred cCEEEEEcccccCCCchhhHHHHHHHHHHHHHHHHHH
Confidence 689999999653 3344899999999988887754
No 320
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=21.79 E-value=89 Score=29.31 Aligned_cols=36 Identities=8% Similarity=0.103 Sum_probs=27.5
Q ss_pred CCEEEeccccCC---CCcchhHHHHHHHHHHHHHHHHHH
Q 017808 301 DNLFFAGEATSM---SYPGSVHGAFSTGLMAAEDCRMRV 336 (365)
Q Consensus 301 ~~l~~aG~~~~~---~~~g~v~gA~~SG~~aA~~i~~~l 336 (365)
+|++++||+.|. ..+.+++.|++.+...|.++...+
T Consensus 278 grv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~l 316 (499)
T 2qa2_A 278 GRVLLAGDSAHVHLPAGGQGMNVSVQDSVNLGWKLAAVV 316 (499)
T ss_dssp TTEEECGGGTEEECCCSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEecccccCCCccccchhhhHHHHHHHHHHHHHHH
Confidence 689999999663 333488889999998888776543
No 321
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=21.51 E-value=60 Score=31.32 Aligned_cols=38 Identities=8% Similarity=-0.040 Sum_probs=27.7
Q ss_pred CCCEEEeccccCCCCcc--hhHHHHHHHHHHHHHHHHHHH
Q 017808 300 VDNLFFAGEATSMSYPG--SVHGAFSTGLMAAEDCRMRVL 337 (365)
Q Consensus 300 ~~~l~~aG~~~~~~~~g--~v~gA~~SG~~aA~~i~~~l~ 337 (365)
++||+.++.++.|...+ ..--++.-|.++|+.|++...
T Consensus 545 v~nLrVvDaSv~P~~~~~Np~~ti~aiAeraAd~I~~~~~ 584 (587)
T 1gpe_A 545 TQGLRVIDGSIPPTQVSSHVMTIFYGMALKVADAILDDYA 584 (587)
T ss_dssp CBSEEECSTTCCSSCCSSCSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEeeeccCCCCCCcchHHHHHHHHHHHHHHHHhhhh
Confidence 57999999998874332 344456778899998887653
No 322
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=21.26 E-value=75 Score=30.53 Aligned_cols=35 Identities=17% Similarity=0.134 Sum_probs=25.2
Q ss_pred CCCEEEeccccCCCCcc--hhHHHHHHHHHHHHHHHH
Q 017808 300 VDNLFFAGEATSMSYPG--SVHGAFSTGLMAAEDCRM 334 (365)
Q Consensus 300 ~~~l~~aG~~~~~~~~g--~v~gA~~SG~~aA~~i~~ 334 (365)
+.||+.+..++.|...+ ..--++.-|.+||+.|+.
T Consensus 528 v~~LrVvDaSv~P~~~~~n~~~~~~~iaekaAd~I~~ 564 (566)
T 3fim_B 528 VDGLRIVDGSILPFAPNAHTQGPIYLVGKQGADLIKA 564 (566)
T ss_dssp CBSEEECSGGGCCSCCSSCTHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEcccccCCCCCCcCcHHHHHHHHHHHHHHHhh
Confidence 57999999999884333 344456778888887764
No 323
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=21.21 E-value=93 Score=29.18 Aligned_cols=35 Identities=6% Similarity=0.099 Sum_probs=26.8
Q ss_pred CCEEEeccccCC---CCcchhHHHHHHHHHHHHHHHHH
Q 017808 301 DNLFFAGEATSM---SYPGSVHGAFSTGLMAAEDCRMR 335 (365)
Q Consensus 301 ~~l~~aG~~~~~---~~~g~v~gA~~SG~~aA~~i~~~ 335 (365)
+|++++||+.|. ..+.+++.+++.+...|.++...
T Consensus 277 grv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~ 314 (500)
T 2qa1_A 277 GRVILAGDSAHIHLPAGGQGMNTSIQDAVNLGWKLGAV 314 (500)
T ss_dssp TTEEECGGGTEECCCCSSCHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEccccCCCCccccchhhhHHHHHHHHHHHHHH
Confidence 689999999663 23348888999998888777654
No 324
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=20.73 E-value=87 Score=28.01 Aligned_cols=35 Identities=17% Similarity=0.144 Sum_probs=28.1
Q ss_pred CCEEEeccccCC---CCcchhHHHHHHHHHHHHHHHHH
Q 017808 301 DNLFFAGEATSM---SYPGSVHGAFSTGLMAAEDCRMR 335 (365)
Q Consensus 301 ~~l~~aG~~~~~---~~~g~v~gA~~SG~~aA~~i~~~ 335 (365)
+|++++||+.+. ..+.+++-|+++|..+|+.|...
T Consensus 286 ~rv~lvGDAAh~~~P~~GqG~~~al~da~~La~~L~~~ 323 (399)
T 2x3n_A 286 DNVAMLGDAIHNVHPITGQGMNLAIEDASALADALDLA 323 (399)
T ss_dssp TTEEECGGGTEECCGGGCCHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEechhccCCCcccccHHHHHHHHHHHHHHHHhh
Confidence 689999999764 23348899999999999888654
Done!