Query 017811
Match_columns 365
No_of_seqs 365 out of 3420
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 05:19:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017811.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017811hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2if4_A ATFKBP42; FKBP-like, al 100.0 6.2E-53 2.1E-57 399.6 27.5 335 1-338 1-335 (338)
2 1kt0_A FKBP51, 51 kDa FK506-bi 100.0 2.7E-43 9.3E-48 346.6 29.7 282 50-337 29-421 (457)
3 1p5q_A FKBP52, FK506-binding p 100.0 5.1E-40 1.7E-44 310.6 33.4 271 49-333 22-296 (336)
4 2f4e_A ATFKBP42; FKBP-like, al 100.0 4E-31 1.4E-35 226.3 17.1 180 1-183 1-180 (180)
5 1kt0_A FKBP51, 51 kDa FK506-bi 99.9 2.5E-25 8.5E-30 218.5 19.8 214 51-289 145-407 (457)
6 2lkn_A AH receptor-interacting 99.9 2E-26 6.8E-31 192.6 8.8 116 48-166 6-161 (165)
7 1jvw_A Macrophage infectivity 99.9 3E-25 1E-29 187.0 14.8 125 46-181 31-156 (167)
8 2jwx_A FKBP38NTD, FK506-bindin 99.9 7E-25 2.4E-29 182.7 16.6 138 19-165 10-151 (157)
9 1yat_A FK506 binding protein; 99.9 7.3E-25 2.5E-29 173.8 14.3 111 48-162 2-113 (113)
10 3o5e_A Peptidyl-prolyl CIS-tra 99.9 5.8E-25 2E-29 181.6 14.2 108 51-162 34-142 (144)
11 3oe2_A Peptidyl-prolyl CIS-tra 99.9 1.2E-25 4E-30 196.4 10.5 125 20-162 94-218 (219)
12 3kz7_A FK506-binding protein 3 99.9 7E-25 2.4E-29 175.6 14.0 110 50-162 2-119 (119)
13 3o5q_A Peptidyl-prolyl CIS-tra 99.9 8.9E-25 3E-29 177.0 13.0 110 50-163 17-127 (128)
14 2y78_A Peptidyl-prolyl CIS-tra 99.9 2.2E-24 7.6E-29 175.5 14.5 112 46-161 22-133 (133)
15 3b7x_A FK506-binding protein 6 99.9 6E-25 2.1E-29 179.3 11.1 110 50-162 24-133 (134)
16 2ppn_A FK506-binding protein 1 99.9 2.5E-24 8.4E-29 169.1 12.8 106 53-162 1-107 (107)
17 2awg_A 38 kDa FK-506 binding p 99.9 6.4E-24 2.2E-28 169.6 14.1 112 43-162 3-117 (118)
18 4dip_A Peptidyl-prolyl CIS-tra 99.9 4.5E-24 1.5E-28 172.3 13.2 115 46-164 6-124 (125)
19 1fd9_A Protein (macrophage inf 99.9 4.5E-24 1.5E-28 186.5 13.9 112 46-163 100-211 (213)
20 1r9h_A FKB-6, FK506 binding pr 99.9 5.9E-24 2E-28 173.7 13.2 111 50-164 12-123 (135)
21 2lgo_A FKBP; infectious diseas 99.9 4.8E-24 1.6E-28 172.9 12.5 111 47-161 17-130 (130)
22 2vn1_A 70 kDa peptidylprolyl i 99.9 1.2E-23 4E-28 170.7 14.7 114 46-163 9-127 (129)
23 3uf8_A Ubiquitin-like protein 99.9 1.6E-23 5.4E-28 183.3 14.3 112 46-161 98-209 (209)
24 2d9f_A FK506-binding protein 8 99.9 1.5E-23 5.1E-28 171.3 12.8 118 41-166 5-126 (135)
25 1q6h_A FKBP-type peptidyl-prol 99.9 2E-23 7E-28 183.6 14.4 110 46-162 115-224 (224)
26 1u79_A FKBP-type peptidyl-prol 99.9 8.5E-24 2.9E-28 171.5 10.1 115 45-161 5-128 (129)
27 3rkv_A Putative peptidylprolyl 99.9 1.5E-23 5.2E-28 175.9 11.7 156 175-330 4-161 (162)
28 4gco_A Protein STI-1; structur 99.9 4.8E-21 1.7E-25 154.5 15.5 114 180-310 11-124 (126)
29 1q1c_A FK506-binding protein 4 99.9 2.8E-21 9.7E-26 176.7 15.6 111 50-164 49-160 (280)
30 2pbc_A FK506-binding protein 2 99.9 2.7E-21 9.2E-26 150.3 10.8 97 64-164 3-99 (102)
31 2fbn_A 70 kDa peptidylprolyl i 99.8 4E-20 1.4E-24 160.1 18.1 176 157-336 16-191 (198)
32 2hr2_A Hypothetical protein; a 99.8 1.1E-20 3.8E-25 157.2 11.2 142 174-320 3-155 (159)
33 3jxv_A 70 kDa peptidyl-prolyl 99.8 4.5E-20 1.5E-24 175.0 13.7 111 51-163 243-355 (356)
34 3jxv_A 70 kDa peptidyl-prolyl 99.8 5.9E-22 2E-26 187.9 -0.2 117 45-165 4-121 (356)
35 1ihg_A Cyclophilin 40; ppiase 99.8 5.2E-19 1.8E-23 168.8 16.5 157 173-330 214-370 (370)
36 1q1c_A FK506-binding protein 4 99.8 1.4E-18 4.8E-23 158.8 13.5 108 50-166 166-277 (280)
37 4gcn_A Protein STI-1; structur 99.8 4.1E-18 1.4E-22 137.3 13.1 115 178-310 4-125 (127)
38 3upv_A Heat shock protein STI1 99.8 1.1E-17 3.9E-22 133.5 14.2 116 181-313 3-124 (126)
39 3sz7_A HSC70 cochaperone (SGT) 99.7 1.2E-16 4.1E-21 133.8 14.6 121 180-317 9-131 (164)
40 3gyz_A Chaperone protein IPGC; 99.7 2.2E-16 7.4E-21 131.4 14.8 105 180-301 34-138 (151)
41 4ga2_A E3 SUMO-protein ligase 99.7 2.8E-17 9.4E-22 136.3 9.2 133 188-337 3-135 (150)
42 4ga2_A E3 SUMO-protein ligase 99.7 1.7E-16 5.9E-21 131.5 11.0 116 180-312 29-145 (150)
43 2xcb_A PCRH, regulatory protei 99.7 6.2E-16 2.1E-20 126.5 14.2 122 180-318 16-137 (142)
44 2vgx_A Chaperone SYCD; alterna 99.7 5.3E-16 1.8E-20 128.3 13.4 118 180-314 19-136 (148)
45 3q49_B STIP1 homology and U bo 99.7 5.4E-16 1.9E-20 124.9 12.6 122 181-319 8-134 (137)
46 4gyw_A UDP-N-acetylglucosamine 99.7 5E-16 1.7E-20 160.0 15.3 142 179-338 6-147 (723)
47 4dt4_A FKBP-type 16 kDa peptid 99.7 1.2E-16 4.2E-21 133.9 8.4 73 66-140 24-96 (169)
48 3urz_A Uncharacterized protein 99.7 3.5E-15 1.2E-19 130.2 17.2 147 182-329 4-151 (208)
49 4i17_A Hypothetical protein; T 99.6 4.4E-15 1.5E-19 130.6 16.0 134 183-334 8-149 (228)
50 3pr9_A FKBP-type peptidyl-prol 99.6 4.4E-16 1.5E-20 129.3 8.8 71 67-140 2-85 (157)
51 1hxv_A Trigger factor; FKBP fo 99.6 5.9E-16 2E-20 121.8 8.2 86 64-161 27-112 (113)
52 1elw_A TPR1-domain of HOP; HOP 99.6 9.7E-15 3.3E-19 113.3 14.3 114 181-311 3-116 (118)
53 2pl2_A Hypothetical conserved 99.6 3.2E-15 1.1E-19 131.3 12.3 100 235-336 75-185 (217)
54 1a17_A Serine/threonine protei 99.6 4E-14 1.4E-18 117.1 17.9 118 176-310 7-124 (166)
55 3vtx_A MAMA; tetratricopeptide 99.6 1E-14 3.6E-19 123.7 14.4 151 182-333 5-172 (184)
56 2h6f_A Protein farnesyltransfe 99.6 2.5E-15 8.7E-20 143.8 11.5 136 181-334 96-232 (382)
57 2vyi_A SGTA protein; chaperone 99.6 2.9E-14 9.8E-19 112.5 15.3 123 176-315 6-128 (131)
58 2pl2_A Hypothetical conserved 99.6 1.5E-14 5.1E-19 127.0 14.4 139 182-321 39-205 (217)
59 3prb_A FKBP-type peptidyl-prol 99.6 2.8E-15 9.7E-20 131.7 9.2 71 67-140 2-85 (231)
60 2kr7_A FKBP-type peptidyl-prol 99.6 6.6E-15 2.3E-19 121.9 10.5 73 66-140 6-78 (151)
61 2dba_A Smooth muscle cell asso 99.6 2.6E-14 8.8E-19 116.0 13.8 117 181-311 27-143 (148)
62 1hxi_A PEX5, peroxisome target 99.6 9.2E-15 3.2E-19 116.5 10.4 102 184-302 19-120 (121)
63 2lni_A Stress-induced-phosphop 99.6 2E-14 6.8E-19 114.3 12.3 116 181-313 15-130 (133)
64 2xev_A YBGF; tetratricopeptide 99.6 3.8E-14 1.3E-18 112.7 13.8 117 183-313 3-122 (129)
65 2h6f_A Protein farnesyltransfe 99.6 1.1E-14 3.9E-19 139.2 12.5 140 181-337 130-275 (382)
66 2kfw_A FKBP-type peptidyl-prol 99.6 1.3E-14 4.4E-19 124.7 10.8 71 67-140 3-73 (196)
67 1elr_A TPR2A-domain of HOP; HO 99.6 4.9E-14 1.7E-18 111.4 13.4 119 180-316 2-127 (131)
68 2k8i_A SLYD, peptidyl-prolyl C 99.6 1.3E-14 4.6E-19 122.2 10.4 71 67-140 3-73 (171)
69 4gyw_A UDP-N-acetylglucosamine 99.6 2E-14 6.7E-19 148.2 13.3 123 182-321 43-165 (723)
70 1zu2_A Mitochondrial import re 99.5 3.9E-14 1.3E-18 117.5 12.0 108 191-315 11-139 (158)
71 1wao_1 Serine/threonine protei 99.5 4.4E-14 1.5E-18 139.1 13.6 130 179-326 3-134 (477)
72 2c2l_A CHIP, carboxy terminus 99.5 8.8E-14 3E-18 127.3 14.2 102 182-300 4-105 (281)
73 4i17_A Hypothetical protein; T 99.5 1.5E-13 5.3E-18 120.6 15.1 118 183-317 43-169 (228)
74 1ix5_A FKBP; ppiase, isomerase 99.5 9.2E-15 3.1E-19 121.0 6.0 73 67-141 2-87 (151)
75 3gyz_A Chaperone protein IPGC; 99.5 1.9E-14 6.5E-19 119.6 7.3 120 199-336 19-138 (151)
76 3vtx_A MAMA; tetratricopeptide 99.5 2.9E-13 9.8E-18 114.7 14.3 121 182-302 39-176 (184)
77 4gco_A Protein STI-1; structur 99.5 5E-14 1.7E-18 113.1 8.9 104 234-338 14-117 (126)
78 1na0_A Designed protein CTPR3; 99.5 9.9E-13 3.4E-17 102.6 15.8 114 182-312 9-122 (125)
79 3k9i_A BH0479 protein; putativ 99.5 5.4E-14 1.8E-18 110.9 8.1 98 194-308 2-102 (117)
80 1hh8_A P67PHOX, NCF-2, neutrop 99.5 4.7E-13 1.6E-17 115.8 14.8 137 180-337 4-156 (213)
81 3urz_A Uncharacterized protein 99.5 6.5E-13 2.2E-17 115.7 14.7 130 188-336 60-191 (208)
82 3qky_A Outer membrane assembly 99.5 3E-13 1E-17 121.5 12.9 140 182-336 15-182 (261)
83 3cgm_A SLYD, peptidyl-prolyl C 99.5 1E-13 3.5E-18 115.3 8.1 66 67-140 3-68 (158)
84 2yhc_A BAMD, UPF0169 lipoprote 99.5 4.6E-13 1.6E-17 118.0 12.5 140 182-336 4-181 (225)
85 2kck_A TPR repeat; tetratricop 99.5 6E-13 2E-17 102.1 11.5 102 182-300 6-110 (112)
86 2vgx_A Chaperone SYCD; alterna 99.5 1.2E-13 4E-18 114.1 7.8 121 203-341 8-128 (148)
87 2e2e_A Formate-dependent nitri 99.4 1.9E-12 6.4E-17 109.1 14.4 112 182-310 44-158 (177)
88 2pzi_A Probable serine/threoni 99.4 3.1E-13 1.1E-17 138.8 11.2 136 184-338 435-570 (681)
89 2fo7_A Synthetic consensus TPR 99.4 1.6E-12 5.5E-17 102.5 12.8 131 184-332 3-133 (136)
90 2e2e_A Formate-dependent nitri 99.4 5.7E-13 1.9E-17 112.3 10.5 137 184-338 12-151 (177)
91 3qky_A Outer membrane assembly 99.4 3.1E-12 1.1E-16 114.8 15.8 142 182-337 52-230 (261)
92 3u4t_A TPR repeat-containing p 99.4 1.8E-12 6E-17 116.2 14.1 150 184-335 5-175 (272)
93 3ieg_A DNAJ homolog subfamily 99.4 3.5E-12 1.2E-16 118.0 16.1 122 183-317 235-356 (359)
94 4abn_A Tetratricopeptide repea 99.4 1.1E-12 3.7E-17 129.0 13.2 153 182-335 102-291 (474)
95 2vsy_A XCC0866; transferase, g 99.4 1.2E-12 4E-17 131.3 13.2 137 181-335 22-161 (568)
96 4abn_A Tetratricopeptide repea 99.4 6.7E-13 2.3E-17 130.5 10.8 146 182-328 137-318 (474)
97 1xnf_A Lipoprotein NLPI; TPR, 99.4 4.5E-12 1.5E-16 113.4 15.3 134 180-332 41-174 (275)
98 3uq3_A Heat shock protein STI1 99.4 3E-12 1E-16 113.1 13.9 133 180-330 103-235 (258)
99 2xcb_A PCRH, regulatory protei 99.4 5.6E-13 1.9E-17 108.7 8.2 109 235-344 20-128 (142)
100 3as5_A MAMA; tetratricopeptide 99.4 4E-12 1.4E-16 106.2 13.6 133 183-333 43-175 (186)
101 2y4t_A DNAJ homolog subfamily 99.4 5.4E-12 1.9E-16 121.4 16.4 136 184-335 259-394 (450)
102 4eqf_A PEX5-related protein; a 99.4 2.3E-12 8E-17 120.9 13.2 129 188-334 183-313 (365)
103 1w3b_A UDP-N-acetylglucosamine 99.4 3.3E-12 1.1E-16 120.9 14.3 98 236-334 274-371 (388)
104 4eqf_A PEX5-related protein; a 99.4 9.4E-13 3.2E-17 123.6 10.1 135 182-334 65-209 (365)
105 3as5_A MAMA; tetratricopeptide 99.4 3.2E-12 1.1E-16 106.8 12.1 137 181-335 7-143 (186)
106 3ieg_A DNAJ homolog subfamily 99.4 3.8E-12 1.3E-16 117.8 13.7 109 182-307 3-114 (359)
107 2q7f_A YRRB protein; TPR, prot 99.4 7E-12 2.4E-16 110.0 14.7 135 182-334 57-191 (243)
108 1w3b_A UDP-N-acetylglucosamine 99.4 6.7E-12 2.3E-16 118.8 15.4 154 182-336 169-339 (388)
109 3uq3_A Heat shock protein STI1 99.4 2.3E-12 7.7E-17 113.9 11.3 153 181-335 4-206 (258)
110 3u4t_A TPR repeat-containing p 99.4 2.5E-12 8.7E-17 115.1 11.7 128 188-332 80-209 (272)
111 3fp2_A TPR repeat-containing p 99.4 6.3E-12 2.2E-16 123.6 15.3 115 170-302 13-127 (537)
112 2l6j_A TPR repeat-containing p 99.4 3.1E-13 1.1E-17 104.3 4.4 95 181-292 3-103 (111)
113 2vq2_A PILW, putative fimbrial 99.4 1.3E-11 4.4E-16 106.7 15.2 151 182-333 8-178 (225)
114 2ho1_A Type 4 fimbrial biogene 99.4 1.5E-11 5.1E-16 108.9 15.9 133 185-335 74-208 (252)
115 2q7f_A YRRB protein; TPR, prot 99.4 5.1E-12 1.7E-16 110.9 12.6 138 182-337 91-228 (243)
116 3hym_B Cell division cycle pro 99.4 5.8E-12 2E-16 115.5 13.5 161 183-344 126-312 (330)
117 1hh8_A P67PHOX, NCF-2, neutrop 99.4 7.1E-12 2.4E-16 108.3 13.0 103 182-301 37-155 (213)
118 3mkr_A Coatomer subunit epsilo 99.3 8.3E-12 2.8E-16 114.7 13.7 138 182-338 130-271 (291)
119 2pzi_A Probable serine/threoni 99.3 2.9E-12 9.8E-17 131.6 11.6 112 184-313 469-580 (681)
120 2y4t_A DNAJ homolog subfamily 99.3 1.6E-11 5.5E-16 118.1 15.5 138 180-335 24-176 (450)
121 1hxi_A PEX5, peroxisome target 99.3 1.7E-11 5.6E-16 97.4 12.9 100 235-335 19-118 (121)
122 2vq2_A PILW, putative fimbrial 99.3 2.4E-11 8.1E-16 105.0 14.2 152 184-336 44-216 (225)
123 2ho1_A Type 4 fimbrial biogene 99.3 1.3E-11 4.4E-16 109.3 12.8 137 181-335 36-174 (252)
124 1fch_A Peroxisomal targeting s 99.3 1E-11 3.4E-16 116.1 12.7 133 186-335 186-318 (368)
125 1qqe_A Vesicular transport pro 99.3 1.2E-11 4.3E-16 113.3 12.9 145 181-337 76-234 (292)
126 2kat_A Uncharacterized protein 99.3 2.2E-11 7.4E-16 95.1 12.5 99 200-315 3-103 (115)
127 1fch_A Peroxisomal targeting s 99.3 1.2E-11 4E-16 115.7 12.8 134 183-335 65-214 (368)
128 1xnf_A Lipoprotein NLPI; TPR, 99.3 1.2E-11 3.9E-16 110.7 12.2 137 187-337 10-146 (275)
129 3qou_A Protein YBBN; thioredox 99.3 1E-11 3.4E-16 113.8 12.0 139 182-338 117-255 (287)
130 2yhc_A BAMD, UPF0169 lipoprote 99.3 2E-11 6.8E-16 107.4 13.5 139 183-336 42-218 (225)
131 3upv_A Heat shock protein STI1 99.3 7.1E-12 2.4E-16 99.4 9.6 98 234-332 5-102 (126)
132 2r5s_A Uncharacterized protein 99.3 1E-11 3.5E-16 104.9 10.9 140 183-341 7-147 (176)
133 4gcn_A Protein STI-1; structur 99.3 4.5E-12 1.5E-16 101.6 8.0 100 234-334 9-115 (127)
134 3sz7_A HSC70 cochaperone (SGT) 99.3 2.8E-11 9.5E-16 100.8 13.0 120 233-355 11-130 (164)
135 1qqe_A Vesicular transport pro 99.3 2E-11 6.8E-16 111.9 13.1 148 178-337 33-193 (292)
136 2gw1_A Mitochondrial precursor 99.3 2.5E-11 8.7E-16 118.3 14.5 107 178-302 2-108 (514)
137 3hym_B Cell division cycle pro 99.3 3.3E-11 1.1E-15 110.4 14.0 152 184-336 24-193 (330)
138 3cv0_A Peroxisome targeting si 99.3 6.8E-11 2.3E-15 108.1 14.2 119 184-319 174-304 (327)
139 1w26_A Trigger factor, TF; cha 99.3 1.5E-11 5E-16 119.0 10.0 89 64-164 155-243 (432)
140 2vsy_A XCC0866; transferase, g 99.2 2.3E-11 7.9E-16 121.8 11.6 125 195-337 2-126 (568)
141 1p5q_A FKBP52, FK506-binding p 99.2 3.8E-12 1.3E-16 119.5 5.1 127 194-338 125-266 (336)
142 2fo7_A Synthetic consensus TPR 99.2 1.6E-10 5.3E-15 90.9 12.6 101 183-300 36-136 (136)
143 3cv0_A Peroxisome targeting si 99.2 7.8E-11 2.7E-15 107.7 12.4 126 191-334 147-272 (327)
144 3q49_B STIP1 homology and U bo 99.2 7.2E-11 2.5E-15 94.4 10.2 100 234-334 10-109 (137)
145 3edt_B KLC 2, kinesin light ch 99.2 1.1E-10 3.9E-15 104.0 12.2 141 180-330 41-197 (283)
146 2l6j_A TPR repeat-containing p 99.2 1.6E-10 5.4E-15 88.7 11.2 81 234-314 5-91 (111)
147 3mkr_A Coatomer subunit epsilo 99.2 2.1E-10 7.4E-15 105.2 14.0 97 193-306 177-274 (291)
148 3fp2_A TPR repeat-containing p 99.2 1.2E-10 4.2E-15 114.4 13.1 158 178-337 239-413 (537)
149 1na3_A Designed protein CTPR2; 99.2 2.5E-10 8.7E-15 84.3 11.5 80 234-313 10-89 (91)
150 2hr2_A Hypothetical protein; a 99.2 9.4E-11 3.2E-15 97.3 9.9 102 233-335 11-135 (159)
151 4g1t_A Interferon-induced prot 99.2 9.9E-11 3.4E-15 113.5 11.4 148 182-337 51-210 (472)
152 2kck_A TPR repeat; tetratricop 99.1 1.5E-10 5E-15 88.5 9.2 101 234-335 7-110 (112)
153 2r5s_A Uncharacterized protein 99.1 1.1E-10 3.7E-15 98.5 8.9 132 178-328 36-170 (176)
154 2kc7_A BFR218_protein; tetratr 99.1 4.5E-11 1.6E-15 90.5 5.8 69 236-304 3-72 (99)
155 3qou_A Protein YBBN; thioredox 99.1 1.2E-10 4.2E-15 106.5 9.5 120 184-320 153-274 (287)
156 3rkv_A Putative peptidylprolyl 99.1 1.1E-10 3.8E-15 96.9 8.3 103 233-336 11-131 (162)
157 2xpi_A Anaphase-promoting comp 99.1 6.3E-10 2.2E-14 111.0 15.4 130 184-331 375-504 (597)
158 1elw_A TPR1-domain of HOP; HOP 99.1 7.3E-10 2.5E-14 85.2 12.1 102 234-336 5-106 (118)
159 3ma5_A Tetratricopeptide repea 99.1 2.7E-10 9.2E-15 87.0 9.4 76 235-310 9-86 (100)
160 1na3_A Designed protein CTPR2; 99.1 5.1E-10 1.7E-14 82.7 10.6 84 181-281 8-91 (91)
161 2lni_A Stress-induced-phosphop 99.1 3.4E-10 1.2E-14 89.4 10.0 101 234-335 17-117 (133)
162 3edt_B KLC 2, kinesin light ch 99.1 4.2E-10 1.4E-14 100.3 11.6 109 179-296 82-198 (283)
163 3ro3_A PINS homolog, G-protein 99.1 6.5E-10 2.2E-14 90.2 11.8 131 179-320 6-148 (164)
164 1t11_A Trigger factor, TF; hel 99.1 3.9E-11 1.3E-15 114.5 5.0 87 66-164 160-246 (392)
165 2fbn_A 70 kDa peptidylprolyl i 99.1 1.2E-10 4.1E-15 100.0 7.4 105 233-338 38-158 (198)
166 3ulq_A Response regulator aspa 99.1 5.2E-10 1.8E-14 105.9 12.4 139 180-329 141-291 (383)
167 2xev_A YBGF; tetratricopeptide 99.1 4.1E-10 1.4E-14 88.9 9.8 101 235-336 4-110 (129)
168 2xpi_A Anaphase-promoting comp 99.1 1.7E-09 5.8E-14 107.8 16.5 151 183-334 306-473 (597)
169 2ifu_A Gamma-SNAP; membrane fu 99.1 2.4E-10 8.2E-15 105.4 9.4 142 181-336 75-228 (307)
170 3u3w_A Transcriptional activat 99.1 3E-10 1E-14 103.8 9.8 136 182-328 115-263 (293)
171 1a17_A Serine/threonine protei 99.1 9.3E-10 3.2E-14 90.4 11.3 105 233-338 13-117 (166)
172 2gw1_A Mitochondrial precursor 99.1 1.3E-09 4.6E-14 106.0 14.2 129 183-311 339-493 (514)
173 4a1s_A PINS, partner of inscut 99.1 8.6E-10 2.9E-14 104.7 12.3 125 179-316 45-181 (411)
174 2kc7_A BFR218_protein; tetratr 99.1 1E-09 3.5E-14 82.8 10.4 59 235-301 37-95 (99)
175 3n71_A Histone lysine methyltr 99.1 1.9E-09 6.5E-14 106.0 15.0 144 175-328 302-461 (490)
176 2vyi_A SGTA protein; chaperone 99.0 1.6E-09 5.4E-14 84.8 11.3 102 233-335 12-113 (131)
177 1na0_A Designed protein CTPR3; 99.0 2.2E-09 7.5E-14 83.2 11.3 102 234-336 10-111 (125)
178 3u3w_A Transcriptional activat 99.0 8.5E-10 2.9E-14 100.8 10.1 107 181-297 154-267 (293)
179 2qfc_A PLCR protein; TPR, HTH, 99.0 1.5E-09 5.2E-14 99.1 11.7 133 185-328 118-263 (293)
180 3ulq_A Response regulator aspa 99.0 1.9E-09 6.6E-14 102.0 12.8 109 179-298 181-295 (383)
181 2ifu_A Gamma-SNAP; membrane fu 99.0 1.2E-09 4.3E-14 100.6 11.2 109 180-301 114-228 (307)
182 3nf1_A KLC 1, kinesin light ch 99.0 9.2E-10 3.1E-14 99.8 10.1 108 180-296 109-224 (311)
183 1pc2_A Mitochondria fission pr 99.0 1.7E-09 6E-14 88.6 10.6 104 194-314 10-118 (152)
184 3nf1_A KLC 1, kinesin light ch 99.0 1.3E-09 4.4E-14 98.8 11.0 141 180-330 67-223 (311)
185 3q15_A PSP28, response regulat 99.0 2.1E-09 7.2E-14 101.7 12.8 141 180-331 139-290 (378)
186 3q15_A PSP28, response regulat 99.0 3.1E-09 1.1E-13 100.5 13.8 109 180-299 180-293 (378)
187 1dce_A Protein (RAB geranylger 99.0 4.6E-09 1.6E-13 105.4 15.7 138 182-336 63-226 (567)
188 2dba_A Smooth muscle cell asso 99.0 1.9E-09 6.6E-14 86.7 10.7 102 234-336 29-133 (148)
189 2ond_A Cleavage stimulation fa 99.0 4E-09 1.4E-13 97.1 13.4 132 183-331 100-232 (308)
190 3ro2_A PINS homolog, G-protein 99.0 1.9E-09 6.6E-14 98.1 11.2 122 182-316 5-138 (338)
191 1ouv_A Conserved hypothetical 99.0 1.1E-08 3.8E-13 91.8 15.5 126 182-313 6-158 (273)
192 1dce_A Protein (RAB geranylger 99.0 1E-08 3.4E-13 102.9 16.3 144 178-338 24-180 (567)
193 3sf4_A G-protein-signaling mod 99.0 2E-09 6.8E-14 101.3 10.5 122 182-316 9-142 (406)
194 2ond_A Cleavage stimulation fa 99.0 1.4E-08 4.9E-13 93.3 15.6 119 199-335 33-167 (308)
195 2if4_A ATFKBP42; FKBP-like, al 98.9 5.6E-10 1.9E-14 104.7 5.9 103 184-303 232-335 (338)
196 1elr_A TPR2A-domain of HOP; HO 98.9 2.6E-09 8.9E-14 83.7 8.8 99 234-333 5-110 (131)
197 3sf4_A G-protein-signaling mod 98.9 4.4E-09 1.5E-13 99.0 11.8 138 181-330 186-335 (406)
198 2c2l_A CHIP, carboxy terminus 98.9 4.8E-09 1.6E-13 95.6 11.6 100 235-335 6-105 (281)
199 4g1t_A Interferon-induced prot 98.9 7.3E-09 2.5E-13 100.2 12.9 123 183-305 248-410 (472)
200 3gw4_A Uncharacterized protein 98.9 4.2E-09 1.4E-13 89.6 9.7 137 181-329 25-174 (203)
201 3k9i_A BH0479 protein; putativ 98.9 6.9E-10 2.4E-14 86.9 4.2 96 245-341 2-100 (117)
202 2qfc_A PLCR protein; TPR, HTH, 98.9 4.1E-08 1.4E-12 89.5 16.7 139 179-329 72-223 (293)
203 3ro3_A PINS homolog, G-protein 98.9 7.2E-09 2.4E-13 83.9 10.3 107 182-299 49-161 (164)
204 3dss_A Geranylgeranyl transfer 98.9 7.3E-08 2.5E-12 89.7 18.2 136 184-336 66-227 (331)
205 3ro2_A PINS homolog, G-protein 98.9 6E-09 2.1E-13 94.8 10.6 138 181-330 182-331 (338)
206 1ihg_A Cyclophilin 40; ppiase 98.9 3.5E-09 1.2E-13 100.6 8.9 103 235-338 225-343 (370)
207 3dra_A Protein farnesyltransfe 98.9 1.7E-08 5.9E-13 93.2 13.1 115 182-313 67-192 (306)
208 4a1s_A PINS, partner of inscut 98.9 4.1E-09 1.4E-13 100.0 8.9 140 182-333 223-374 (411)
209 1wao_1 Serine/threonine protei 98.9 2.7E-09 9.3E-14 104.8 7.4 106 233-339 6-111 (477)
210 3qww_A SET and MYND domain-con 98.8 3.1E-08 1E-12 95.9 14.0 124 178-310 294-430 (433)
211 1zu2_A Mitochondrial import re 98.8 6.5E-09 2.2E-13 86.0 7.9 94 243-336 12-125 (158)
212 1ouv_A Conserved hypothetical 98.8 6E-08 2.1E-12 86.9 15.0 95 234-333 111-217 (273)
213 4f3v_A ESX-1 secretion system 98.8 1.8E-08 6.1E-13 91.5 11.1 108 184-307 137-247 (282)
214 3rjv_A Putative SEL1 repeat pr 98.8 1.3E-08 4.5E-13 88.5 9.9 111 181-313 17-137 (212)
215 3q7a_A Farnesyltransferase alp 98.8 6.1E-08 2.1E-12 90.8 14.8 130 192-338 64-203 (349)
216 3dra_A Protein farnesyltransfe 98.8 1.7E-08 6E-13 93.1 10.2 132 184-332 105-251 (306)
217 3dss_A Geranylgeranyl transfer 98.8 4.9E-08 1.7E-12 90.9 13.0 130 192-338 39-181 (331)
218 3rjv_A Putative SEL1 repeat pr 98.8 2.7E-08 9.2E-13 86.5 10.3 111 182-313 50-174 (212)
219 3q7a_A Farnesyltransferase alp 98.8 5.3E-08 1.8E-12 91.2 12.2 137 183-336 89-242 (349)
220 3qwp_A SET and MYND domain-con 98.8 1E-07 3.5E-12 92.2 14.6 125 181-314 286-423 (429)
221 2v5f_A Prolyl 4-hydroxylase su 98.7 8.5E-08 2.9E-12 73.7 10.0 78 236-313 8-92 (104)
222 4f3v_A ESX-1 secretion system 98.7 4.3E-08 1.5E-12 89.0 8.7 131 185-334 105-240 (282)
223 3ma5_A Tetratricopeptide repea 98.7 6.7E-08 2.3E-12 73.4 8.0 84 181-281 6-91 (100)
224 3bee_A Putative YFRE protein; 98.7 1.7E-07 5.8E-12 70.6 9.9 67 235-301 8-77 (93)
225 2ooe_A Cleavage stimulation fa 98.6 3.3E-07 1.1E-11 90.6 14.1 135 184-335 323-458 (530)
226 2v5f_A Prolyl 4-hydroxylase su 98.6 9.9E-08 3.4E-12 73.3 8.0 83 182-274 5-87 (104)
227 3gw4_A Uncharacterized protein 98.6 1.6E-07 5.4E-12 79.6 10.1 109 180-298 64-178 (203)
228 1hz4_A MALT regulatory protein 98.6 4.3E-07 1.5E-11 85.1 13.7 127 181-318 52-191 (373)
229 1nzn_A CGI-135 protein, fissio 98.6 8.4E-07 2.9E-11 70.1 12.4 105 193-314 12-121 (126)
230 2kat_A Uncharacterized protein 98.6 1.4E-07 4.9E-12 73.0 7.5 83 251-334 3-85 (115)
231 2ooe_A Cleavage stimulation fa 98.5 1.4E-06 4.9E-11 86.0 15.6 118 199-334 255-388 (530)
232 1klx_A Cysteine rich protein B 98.5 1E-06 3.5E-11 71.2 12.0 97 188-307 31-135 (138)
233 2xm6_A Protein corresponding t 98.4 2.9E-06 9.8E-11 83.0 13.9 77 234-312 364-451 (490)
234 1hz4_A MALT regulatory protein 98.4 1.6E-06 5.3E-11 81.2 11.2 141 178-331 10-164 (373)
235 1xi4_A Clathrin heavy chain; a 98.4 4.2E-06 1.4E-10 89.9 14.5 140 184-349 1197-1366(1630)
236 1b89_A Protein (clathrin heavy 98.3 2.3E-06 7.9E-11 82.2 11.1 138 184-349 124-293 (449)
237 3n71_A Histone lysine methyltr 98.3 9.8E-07 3.3E-11 86.7 8.5 114 179-301 348-469 (490)
238 3e4b_A ALGK; tetratricopeptide 98.3 7.7E-06 2.6E-10 79.4 13.8 107 184-312 178-294 (452)
239 1klx_A Cysteine rich protein B 98.3 7.5E-06 2.6E-10 66.0 11.4 94 195-313 8-105 (138)
240 4b4t_Q 26S proteasome regulato 98.3 2.2E-06 7.6E-11 81.6 9.0 143 185-328 7-201 (434)
241 2xm6_A Protein corresponding t 98.3 1.4E-05 4.8E-10 78.0 14.9 108 182-312 39-158 (490)
242 3u64_A Protein TP_0956; tetrat 98.2 5.3E-06 1.8E-10 74.9 9.6 92 194-300 175-273 (301)
243 4b4t_Q 26S proteasome regulato 98.1 1.5E-05 5.2E-10 75.8 11.9 119 180-298 53-206 (434)
244 1pc2_A Mitochondria fission pr 98.1 1.1E-05 3.9E-10 65.9 8.6 78 183-276 33-114 (152)
245 3ly7_A Transcriptional activat 98.1 5.1E-05 1.7E-09 71.1 14.1 117 184-301 198-344 (372)
246 3o48_A Mitochondria fission 1 98.1 2E-05 6.8E-10 62.4 9.4 83 234-316 41-127 (134)
247 3e4b_A ALGK; tetratricopeptide 98.1 2.3E-05 7.9E-10 76.0 12.0 101 186-312 217-329 (452)
248 1y8m_A FIS1; mitochondria, unk 98.1 3.9E-05 1.3E-09 61.5 10.8 81 234-314 40-124 (144)
249 1xi4_A Clathrin heavy chain; a 97.9 4.6E-05 1.6E-09 82.0 12.0 108 186-299 1053-1166(1630)
250 3mv2_B Coatomer subunit epsilo 97.9 8.3E-05 2.9E-09 68.2 10.7 145 186-336 104-287 (310)
251 3mv2_B Coatomer subunit epsilo 97.8 0.00012 4.1E-09 67.2 11.3 117 201-334 85-210 (310)
252 3bee_A Putative YFRE protein; 97.8 0.00017 5.8E-09 53.9 9.8 71 263-334 2-75 (93)
253 3u64_A Protein TP_0956; tetrat 97.8 0.00036 1.2E-08 63.0 12.9 110 248-357 178-299 (301)
254 3ffl_A Anaphase-promoting comp 97.7 0.00029 9.9E-09 58.0 11.2 119 184-311 22-165 (167)
255 3qwp_A SET and MYND domain-con 97.5 0.00021 7.2E-09 68.9 8.5 94 178-280 325-426 (429)
256 3gty_X Trigger factor, TF; cha 97.5 0.00019 6.5E-09 69.1 7.8 75 67-165 155-229 (433)
257 3qww_A SET and MYND domain-con 97.5 0.00023 7.8E-09 68.7 8.2 81 179-268 337-422 (433)
258 2ff4_A Probable regulatory pro 97.5 0.0019 6.5E-08 61.3 14.3 115 181-295 114-233 (388)
259 1b89_A Protein (clathrin heavy 97.3 0.00027 9.2E-09 67.9 5.7 149 176-326 142-307 (449)
260 1nzn_A CGI-135 protein, fissio 97.2 0.0011 3.7E-08 52.2 7.6 43 233-275 74-116 (126)
261 3o48_A Mitochondria fission 1 97.2 0.0022 7.4E-08 50.7 9.0 64 197-276 58-121 (134)
262 1y8m_A FIS1; mitochondria, unk 97.0 0.0028 9.6E-08 50.7 8.6 63 197-275 57-119 (144)
263 4e6h_A MRNA 3'-END-processing 97.0 0.014 4.9E-07 59.3 15.2 99 235-334 436-536 (679)
264 4e6h_A MRNA 3'-END-processing 96.7 0.0086 2.9E-07 61.0 11.0 136 185-337 437-576 (679)
265 3ffl_A Anaphase-promoting comp 96.5 0.0085 2.9E-07 49.2 8.1 96 181-277 62-165 (167)
266 4h7y_A Dual specificity protei 96.1 0.1 3.4E-06 42.1 11.9 115 179-304 17-131 (161)
267 3ly7_A Transcriptional activat 95.9 0.021 7.2E-07 53.4 8.3 69 187-274 282-350 (372)
268 4gns_B Protein CSD3, chitin bi 95.3 0.071 2.4E-06 54.6 10.2 58 236-293 340-397 (754)
269 1zbp_A Hypothetical protein VP 95.2 0.14 4.8E-06 45.5 10.5 69 242-310 6-74 (273)
270 2uy1_A Cleavage stimulation fa 95.0 0.77 2.6E-05 44.6 16.5 141 185-328 216-380 (493)
271 1ya0_A SMG-7 transcript varian 95.0 0.31 1.1E-05 47.5 13.3 79 234-312 153-231 (497)
272 2uy1_A Cleavage stimulation fa 94.6 0.44 1.5E-05 46.3 13.3 57 198-272 195-251 (493)
273 3kae_A CDC27, possible protein 94.5 0.39 1.3E-05 39.6 10.4 69 236-304 65-151 (242)
274 3txn_A 26S proteasome regulato 94.3 0.28 9.6E-06 46.3 10.7 99 187-296 104-210 (394)
275 4b4t_R RPN7, 26S proteasome re 93.6 0.16 5.4E-06 48.6 7.7 99 185-297 134-238 (429)
276 4gns_B Protein CSD3, chitin bi 93.4 0.15 5.2E-06 52.2 7.6 59 184-259 339-397 (754)
277 1zbp_A Hypothetical protein VP 92.8 0.83 2.8E-05 40.5 10.5 63 189-268 4-66 (273)
278 2v6y_A AAA family ATPase, P60 92.0 0.28 9.5E-06 35.3 5.3 42 173-214 1-43 (83)
279 4g26_A Pentatricopeptide repea 90.9 2.9 9.9E-05 40.6 13.1 99 185-301 108-211 (501)
280 4b4t_P 26S proteasome regulato 90.9 3.1 0.00011 39.7 13.1 105 181-296 136-247 (445)
281 2ff4_A Probable regulatory pro 90.3 1.7 6E-05 40.6 10.6 80 238-317 120-221 (388)
282 2cpt_A SKD1 protein, vacuolar 89.9 0.74 2.5E-05 35.4 6.3 43 172-214 7-50 (117)
283 4g26_A Pentatricopeptide repea 89.9 5.9 0.0002 38.4 14.3 115 194-328 82-201 (501)
284 3mv2_A Coatomer subunit alpha; 88.5 5.3 0.00018 36.2 11.7 119 184-304 116-244 (325)
285 2w2u_A Hypothetical P60 katani 88.2 0.61 2.1E-05 33.5 4.4 42 173-214 9-51 (83)
286 2v6x_A Vacuolar protein sortin 87.3 0.75 2.6E-05 33.1 4.5 38 177-214 8-45 (85)
287 3mkr_B Coatomer subunit alpha; 87.1 8.3 0.00028 34.9 12.1 115 185-301 105-232 (320)
288 1ya0_A SMG-7 transcript varian 86.3 3.9 0.00013 39.7 10.2 80 183-279 153-232 (497)
289 1wfd_A Hypothetical protein 15 86.1 2.4 8.1E-05 31.1 6.7 37 178-214 11-47 (93)
290 4b4t_S RPN3, 26S proteasome re 85.5 1.3 4.6E-05 43.0 6.4 68 233-300 231-303 (523)
291 3mkq_B Coatomer subunit alpha; 85.2 2.4 8.2E-05 35.1 7.0 27 182-208 34-60 (177)
292 2dl1_A Spartin; SPG20, MIT, st 83.0 3.5 0.00012 31.4 6.5 78 176-253 16-98 (116)
293 4a5x_A MITD1, MIT domain-conta 83.0 2.4 8.1E-05 30.6 5.4 34 180-213 14-47 (86)
294 2crb_A Nuclear receptor bindin 81.3 2 6.8E-05 31.2 4.3 37 178-214 11-47 (97)
295 3mkq_A Coatomer beta'-subunit; 81.2 4.5 0.00015 40.9 8.8 52 236-287 684-743 (814)
296 4b4t_P 26S proteasome regulato 79.4 12 0.00042 35.5 10.7 71 181-262 176-247 (445)
297 1qsa_A Protein (soluble lytic 78.9 7.9 0.00027 38.6 9.4 56 240-295 292-347 (618)
298 3mkq_A Coatomer beta'-subunit; 78.5 10 0.00036 38.2 10.6 48 242-294 661-708 (814)
299 3mkq_B Coatomer subunit alpha; 77.3 11 0.00037 31.1 8.3 48 243-295 15-62 (177)
300 3t5v_B Nuclear mRNA export pro 77.1 15 0.00051 35.1 10.4 105 194-300 138-254 (455)
301 4fhn_B Nucleoporin NUP120; pro 76.4 5.9 0.0002 42.6 8.2 108 186-293 846-964 (1139)
302 3txn_A 26S proteasome regulato 74.9 8.2 0.00028 36.2 7.8 145 183-327 20-207 (394)
303 4h7y_A Dual specificity protei 72.5 10 0.00036 30.4 6.7 72 193-282 71-142 (161)
304 3kae_A CDC27, possible protein 71.7 41 0.0014 27.7 10.6 53 237-294 37-89 (242)
305 1wy6_A Hypothetical protein ST 70.2 20 0.00069 28.4 7.6 40 257-296 115-154 (172)
306 2crb_A Nuclear receptor bindin 70.1 7.2 0.00025 28.3 4.7 26 269-294 17-42 (97)
307 4b4t_R RPN7, 26S proteasome re 69.6 7.7 0.00026 36.7 6.4 91 233-323 131-230 (429)
308 3lpz_A GET4 (YOR164C homolog); 69.4 67 0.0023 29.2 13.0 116 176-291 29-160 (336)
309 2vkj_A TM1634; membrane protei 68.3 20 0.00069 25.7 6.6 35 180-214 51-85 (106)
310 3spa_A Mtrpol, DNA-directed RN 67.2 50 0.0017 35.1 12.1 97 184-299 129-235 (1134)
311 3lvg_A Clathrin heavy chain 1; 61.9 0.057 2E-06 52.1 -9.9 131 185-349 147-315 (624)
312 2wb7_A PT26-6P; extra chromoso 61.3 34 0.0012 32.8 8.7 33 249-281 455-488 (526)
313 3t5x_A PCI domain-containing p 59.6 14 0.00049 31.0 5.6 53 233-285 14-71 (203)
314 3spa_A Mtrpol, DNA-directed RN 59.2 67 0.0023 34.1 11.3 94 235-329 129-228 (1134)
315 3ax2_A Mitochondrial import re 59.1 18 0.00062 25.0 4.9 36 180-215 15-50 (73)
316 3ax2_A Mitochondrial import re 57.5 30 0.001 23.9 5.8 29 273-301 23-51 (73)
317 1om2_A Protein (mitochondrial 56.9 29 0.00099 25.3 5.9 42 174-215 12-53 (95)
318 3eab_A Spastin; spastin, MIT, 52.4 23 0.00077 25.5 4.6 70 178-247 12-86 (89)
319 2cfu_A SDSA1; SDS-hydrolase, l 51.3 40 0.0014 33.8 8.1 51 267-317 449-499 (658)
320 2ymb_A MITD1, MIT domain-conta 50.4 3.3 0.00011 36.3 0.0 39 176-214 17-55 (257)
321 4b4t_S RPN3, 26S proteasome re 49.6 64 0.0022 31.3 8.8 105 180-301 268-378 (523)
322 2dl1_A Spartin; SPG20, MIT, st 48.9 23 0.00079 26.8 4.5 43 248-298 18-60 (116)
323 3htx_A HEN1; HEN1, small RNA m 47.8 18 0.00062 37.5 4.8 62 67-129 561-649 (950)
324 4gq2_M Nucleoporin NUP120; bet 47.6 53 0.0018 34.4 8.7 82 186-267 844-932 (950)
325 4gq2_M Nucleoporin NUP120; bet 47.3 28 0.00096 36.6 6.5 53 239-295 816-868 (950)
326 2ijq_A Hypothetical protein; s 46.9 1E+02 0.0036 24.6 8.4 59 237-295 36-103 (161)
327 2wpv_A GET4, UPF0363 protein Y 46.9 1.6E+02 0.0054 26.3 11.9 101 179-290 30-157 (312)
328 2cfu_A SDSA1; SDS-hydrolase, l 44.0 25 0.00087 35.2 5.3 50 234-283 450-499 (658)
329 2w2u_A Hypothetical P60 katani 42.6 31 0.0011 24.4 4.2 19 277-295 29-47 (83)
330 2vkj_A TM1634; membrane protei 42.2 93 0.0032 22.3 6.9 24 273-296 59-82 (106)
331 2v6y_A AAA family ATPase, P60 41.1 33 0.0011 24.1 4.2 43 277-323 21-70 (83)
332 2cpt_A SKD1 protein, vacuolar 40.9 1.1E+02 0.0039 22.9 8.1 20 286-305 44-63 (117)
333 3myv_A SUSD superfamily protei 40.8 42 0.0014 31.7 6.2 55 198-261 164-218 (454)
334 4fhn_B Nucleoporin NUP120; pro 38.9 30 0.001 37.1 5.2 52 239-294 818-869 (1139)
335 2rpa_A Katanin P60 ATPase-cont 38.9 50 0.0017 23.1 4.6 32 183-214 13-44 (78)
336 3kez_A Putative sugar binding 38.7 47 0.0016 31.5 6.1 55 198-261 170-224 (461)
337 1om2_A Protein (mitochondrial 37.9 46 0.0016 24.2 4.5 27 273-299 26-52 (95)
338 2ijq_A Hypothetical protein; s 37.2 96 0.0033 24.9 6.8 68 185-261 35-103 (161)
339 3qnk_A Putative lipoprotein; a 37.1 1.6E+02 0.0054 28.2 9.7 48 249-296 153-211 (517)
340 4aez_C MAD3, mitotic spindle c 36.3 2E+02 0.0068 24.4 9.9 60 236-297 119-180 (223)
341 2o8p_A 14-3-3 domain containin 35.9 1.1E+02 0.0036 26.1 7.1 71 182-261 120-196 (227)
342 3qtm_A Uncharacterized protein 35.3 2.3E+02 0.0079 24.9 10.4 107 174-280 14-132 (346)
343 3mcx_A SUSD superfamily protei 34.9 49 0.0017 31.4 5.6 28 234-261 203-230 (477)
344 2yin_A DOCK2, dedicator of cyt 34.8 33 0.0011 32.5 4.2 96 186-281 39-140 (436)
345 4a5x_A MITD1, MIT domain-conta 34.1 1.2E+02 0.0042 21.3 9.0 25 271-295 20-44 (86)
346 2npm_A 14-3-3 domain containin 33.4 73 0.0025 27.8 5.8 52 199-260 173-225 (260)
347 2rkl_A Vacuolar protein sortin 31.3 65 0.0022 20.7 3.8 39 174-212 12-50 (53)
348 3lew_A SUSD-like carbohydrate 30.8 75 0.0026 30.4 6.2 59 198-262 174-232 (495)
349 2zan_A Vacuolar protein sortin 30.5 11 0.00036 35.9 0.0 38 177-214 6-43 (444)
350 3t5x_A PCI domain-containing p 29.1 76 0.0026 26.4 5.1 34 267-300 14-47 (203)
351 2xze_A STAM-binding protein; h 28.0 1E+02 0.0034 24.3 5.4 41 172-212 30-70 (146)
352 3bu8_A Telomeric repeat-bindin 27.1 73 0.0025 27.0 4.5 64 249-312 88-159 (235)
353 1wfd_A Hypothetical protein 15 25.9 1.8E+02 0.0062 20.7 9.5 21 275-295 23-43 (93)
354 3jq1_A SUSD superfamily protei 25.8 92 0.0032 29.6 5.8 28 234-261 181-208 (481)
355 3ub0_A Non-structural protein 24.9 2.8E+02 0.0097 22.6 9.8 33 325-357 71-103 (199)
356 2oo2_A Hypothetical protein AF 24.9 1E+02 0.0034 21.9 4.3 37 176-212 29-65 (86)
357 4a1g_A Mitotic checkpoint seri 24.8 2.6E+02 0.0088 22.1 9.7 60 236-297 70-131 (152)
358 2cwy_A Hypothetical protein TT 24.8 1.3E+02 0.0046 21.5 5.1 63 186-261 5-67 (94)
359 3qnk_A Putative lipoprotein; a 24.8 77 0.0026 30.5 5.0 59 198-262 153-211 (517)
360 3i4g_A SUSD-like carbohydrate 24.8 2.7E+02 0.0093 26.7 9.0 93 196-295 93-226 (528)
361 2pmr_A Uncharacterized protein 24.8 1.1E+02 0.0037 21.8 4.5 38 175-212 32-69 (87)
362 3myv_A SUSD superfamily protei 24.5 88 0.003 29.5 5.3 47 249-295 164-218 (454)
363 3otn_A SUSD superfamily protei 24.4 2.7E+02 0.0093 26.2 8.8 47 249-295 160-225 (482)
364 2yhe_A SEC-alkyl sulfatase; hy 29.8 16 0.00056 36.7 0.0 53 234-286 462-514 (668)
365 2f23_A Anti-cleavage anti-GREA 23.8 1.4E+02 0.0049 23.5 5.7 22 110-131 123-144 (156)
366 2rpa_A Katanin P60 ATPase-cont 23.2 1.9E+02 0.0066 20.0 7.9 24 272-295 17-40 (78)
367 3lew_A SUSD-like carbohydrate 23.0 1.5E+02 0.0053 28.1 6.8 48 249-296 174-232 (495)
368 3mcx_A SUSD superfamily protei 22.5 1.1E+02 0.0037 29.0 5.6 48 249-296 176-231 (477)
369 2p4v_A Transcription elongatio 22.0 2.1E+02 0.0073 22.6 6.4 23 108-130 120-142 (158)
370 3kez_A Putative sugar binding 21.2 1.6E+02 0.0055 27.6 6.5 47 249-295 170-224 (461)
371 3jys_A SUSD superfamily protei 20.9 1.1E+02 0.0037 29.3 5.2 32 229-261 191-222 (499)
372 3efz_A 14-3-3 protein; 14-3-3, 20.8 2E+02 0.007 25.0 6.4 58 198-262 168-226 (268)
373 3ph0_C ASCG; type III secretio 20.6 1.8E+02 0.0063 18.8 5.7 51 236-287 9-60 (61)
374 1m45_B IQ2, IQ2 motif from MYO 20.4 88 0.003 16.1 2.3 22 344-365 4-25 (26)
No 1
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=100.00 E-value=6.2e-53 Score=399.60 Aligned_cols=335 Identities=76% Similarity=1.193 Sum_probs=240.8
Q ss_pred CcccCCCCCCCCCCCCCCcchhhccccccCCCCCCCCCCCCCCCCceeeeCCCeEEEEEecCCCCCCCCCCEEEEEEEEE
Q 017811 1 MEEVDGEPKSQAPGEVGESEIVTEDAAFVRGEPPQDGDGPPKVDSEVEVLHEKVTKQIIKEGHGQKPSKYSTCFLHYRAW 80 (365)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~k~v~~~G~g~~p~~g~~v~v~y~~~ 80 (365)
|+|++|.+. ...++++++..+..+.+...+..+...||++..++.++++||.|+|+++|.|..|..||.|+|||+++
T Consensus 1 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~gd~v~v~y~g~ 77 (338)
T 2if4_A 1 MDESLEHQT---QTHDQESEIVTEGSAVVHSEPSQEGNVPPKVDSEAEVLDEKVSKQIIKEGHGSKPSKYSTCFLHYRAW 77 (338)
T ss_dssp -------------------------------------CCCCCCCSCCEEEETTEEEEEEECCBSCCCCTTCEEEEEEEEE
T ss_pred Chhhhhhhc---cccCccchhhhhhhccCCCCCCcccCCCCCCCcCceeCCCCeEEEEEeCCCCCCCCCCCEEEEEEEEE
Confidence 778888765 33444477888888889999999999999999999999999999999999999999999999999999
Q ss_pred EcCCCeeeccCcCCCCcceeecCCCCchhhhHHHHHhcCCcCcEEEEEeccccccCCCCCCCCCCCCCCCcEEEEEEEEe
Q 017811 81 AESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIG 160 (365)
Q Consensus 81 ~~~~g~~fd~s~~~~~p~~f~lg~~~~~i~g~e~~l~~Mk~GE~~~~~i~~~~~yg~~g~~~~~~ip~~~~l~~~iel~~ 160 (365)
+.++|++||+++.++.|++|++|.|+++|+||+.+|.+|++||++.|+|||.++||..|...++.||++++++|.|+|+.
T Consensus 78 ~~~~g~~fd~~~~~~~~~~~~lg~~~~~i~g~e~~l~~m~~Ge~~~~~i~~~~~yg~~~~~~~~~ip~~~~l~f~v~L~~ 157 (338)
T 2if4_A 78 TKNSQHKFEDTWHEQQPIELVLGKEKKELAGLAIGVASMKSGERALVHVGWELAYGKEGNFSFPNVPPMADLLYEVEVIG 157 (338)
T ss_dssp ETTTCCCCEEHHHHTCCEEEETTSCCGGGHHHHHHHHHCCBTCEEEEEECGGGSSCSSCCCSSSCCCTTCCEEEEEEEEE
T ss_pred EcCCCcEeecccCCCCCeEEEcCCCCcccHHHHHHHhcCCCCCeEEEEECHHHhcCCCCCCCCCCCCCCCcEEEEEEEEE
Confidence 98769999999877889999999874699999999999999999999999999999998644478999999999999999
Q ss_pred eecCcccccCCCCCHHHHHHHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHH
Q 017811 161 FDETKEGKARSDMTVEERIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMA 240 (365)
Q Consensus 161 ~~~~~~~~~~~~~~~~e~~~~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla 240 (365)
+....++...|.++.++++..+..++..|+.+++.|+|.+|+..|.+|+.+.|.+..+...+...+....+...+|+|+|
T Consensus 158 ~~~~~e~~~~~~~~~~~~~~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla 237 (338)
T 2if4_A 158 FDETKEGKARSDMTVEERIGAADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIA 237 (338)
T ss_dssp EECCCCCBTTTBCCHHHHHHHHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHH
T ss_pred ecCCccccccccCCHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHH
Confidence 99988888899999999999999999999999999999999999999999999876544455555666667778999999
Q ss_pred HHHHHhcCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHH
Q 017811 241 ACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKK 320 (365)
Q Consensus 241 ~~~~kl~~~~~A~~~~~~aL~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~~~~~~~~ 320 (365)
.||+++++|++|+.+|+++|+++|+++++||++|.+|..+|+|++|+.+|+++++++|++..++..|..+....+...++
T Consensus 238 ~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~~~~~~~~~ 317 (338)
T 2if4_A 238 ACLIKLKRYDEAIGHCNIVLTEEEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRALAEQEKALYQK 317 (338)
T ss_dssp HHHHTTTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC-------------------------
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998888888899
Q ss_pred HHHHHhcccCCCCCcccc
Q 017811 321 QKEIYKGIFGPRPEPKQK 338 (365)
Q Consensus 321 ~k~~y~kmf~~~~~~~~~ 338 (365)
++.+|++||+..|...++
T Consensus 318 a~~~~~~~l~~~p~~~~~ 335 (338)
T 2if4_A 318 QKEMYKGIFKGKDEGGAK 335 (338)
T ss_dssp ------------------
T ss_pred HHHHHHHhhCCCCCCCCC
Confidence 999999999999876654
No 2
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=100.00 E-value=2.7e-43 Score=346.56 Aligned_cols=282 Identities=28% Similarity=0.472 Sum_probs=221.5
Q ss_pred eCCCeEEEEEecCCCCC-CCCCCEEEEEEEEEEcCCCeeeccCcCCCCcceeecCCCCchhhhHHHHHhcCCcCcEEEEE
Q 017811 50 LHEKVTKQIIKEGHGQK-PSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSSMKAGEHALLH 128 (365)
Q Consensus 50 ~~~gv~k~v~~~G~g~~-p~~g~~v~v~y~~~~~~~g~~fd~s~~~~~p~~f~lg~~~~~i~g~e~~l~~Mk~GE~~~~~ 128 (365)
+++||.|+|+++|+|.. |..||.|+|||++++.+ |++||+|+.++.|++|.+|.+ ++|+||+.+|.+|++||++.|+
T Consensus 29 ~~~g~~~~~~~~G~g~~~~~~gd~v~v~y~~~~~~-g~~~dss~~~~~p~~~~~g~~-~~i~g~~~~l~~m~~Ge~~~~~ 106 (457)
T 1kt0_A 29 KDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSN-GKKFDSSHDRNEPFVFSLGKG-QVIKAWDIGVATMKRGEICHLL 106 (457)
T ss_dssp ----CEEEC--------CCCBTCEEEEEEEEEC------CBC------CEEEETTST-TSCHHHHHHHTTCCTTCEEEEE
T ss_pred CCCcEEEEEEECCCCCCCCCCCCEEEEEEEEEECC-CCEEeccCCCCCCeEEEeCCc-chhhHHHHHHhhCCCCCEEEEE
Confidence 46899999999999995 99999999999999866 999999988888999999999 8999999999999999999999
Q ss_pred eccccccCCCCCCCCCCCCCCCcEEEEEEEEeeecCc----------------------c--------------------
Q 017811 129 VGWELGYGKEGSFSFPNVSPMADLVYEVVLIGFDETK----------------------E-------------------- 166 (365)
Q Consensus 129 i~~~~~yg~~g~~~~~~ip~~~~l~~~iel~~~~~~~----------------------~-------------------- 166 (365)
|||.++||..|. ++.|||+++++|+|+|+++.... .
T Consensus 107 i~~~~~yg~~g~--~~~i~~~~~l~~~v~l~~~~~~~~~~dg~~~k~i~~~g~~~~~p~~g~~V~v~y~g~~~g~~f~~~ 184 (457)
T 1kt0_A 107 CKPEYAYGSAGS--LPKIPSNATLFFEIELLDFKGEDLFEDGGIIRRTKRKGEGYSNPNEGATVEIHLEGRCGGRMFDCR 184 (457)
T ss_dssp ECGGGTTTTTCB--TTTBCTTCCEEEEEEEEEEECEETTSSSSEEEEEEECCBCSCCCCTTCEEEEEEEEEETTEEEEEE
T ss_pred EChHHhccccCC--CCCCCCCCcEEEEEeeceeecccccCCcceEEEEEecCCCCCCCCCCCEEEEEEEEEeCCeEEecC
Confidence 999999999887 57899999999999998765310 0
Q ss_pred --------------------------------------------------------------------cccCCCCCHHHH
Q 017811 167 --------------------------------------------------------------------GKARSDMTVEER 178 (365)
Q Consensus 167 --------------------------------------------------------------------~~~~~~~~~~e~ 178 (365)
+...|.+.....
T Consensus 185 ~~~f~~g~g~~~~v~~~~e~al~~~~~ge~~~l~i~P~~ay~~~g~~~~~ip~~~~l~y~~~l~~~~~A~~~~~~~~~~~ 264 (457)
T 1kt0_A 185 DVAFTVGEGEDHDIPIGIDKALEKMQREEQCILYLGPRYGFGEAGKPKFGIEPNAELIYEVTLKSFEKAKESWEMDTKEK 264 (457)
T ss_dssp EEEEETTCGGGGTCCHHHHHHHTTCCBTCEEEEEECGGGTTCSSCBGGGTBCTTCCEEEEEEEEEEECCCCGGGSCHHHH
T ss_pred ceEEEeCCCccccCChHHHHHHHhCCCCCEEEEEECcccccCCCCCcccCCCCCCEEEEEhhhhhcccCcchhhcCHHHH
Confidence 000134556778
Q ss_pred HHHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHH
Q 017811 179 IGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSL 258 (365)
Q Consensus 179 ~~~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~ 258 (365)
...+..++.+|+.+++.|+|.+|+..|.+||.+.|.+..+ .++.......+...+|+|+|.||+++++|++|+.+|++
T Consensus 265 ~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~--~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~ 342 (457)
T 1kt0_A 265 LEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGL--SEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDK 342 (457)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSC--CHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccC--ChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 8899999999999999999999999999999999986432 12334455666778999999999999999999999999
Q ss_pred HHhCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCccc
Q 017811 259 VLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEIYKGIFGPRPEPKQ 337 (365)
Q Consensus 259 aL~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~~~~~~~~~k~~y~kmf~~~~~~~~ 337 (365)
+|+++|+++++||++|.+|..+|+|++|+.+|++|++++|++..+...+..+...++++.++++.+|++||+.......
T Consensus 343 al~~~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~~a~~~~~~~~f~k~~~~d~ 421 (457)
T 1kt0_A 343 ALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQKKAKEHNERDRRIYANMFKKFAEQDA 421 (457)
T ss_dssp HHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHC---------
T ss_pred HHhcCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999987665443
No 3
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=100.00 E-value=5.1e-40 Score=310.64 Aligned_cols=271 Identities=27% Similarity=0.441 Sum_probs=245.9
Q ss_pred eeCCCeEEEEEecCCCC-CCCCCCEEEEEEEEEEcCCCeeeccCcCCCCcceeecCCCCc---hhhhHHHHHhcCCcCcE
Q 017811 49 VLHEKVTKQIIKEGHGQ-KPSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKK---EMTGLAIGVSSMKAGEH 124 (365)
Q Consensus 49 ~~~~gv~k~v~~~G~g~-~p~~g~~v~v~y~~~~~~~g~~fd~s~~~~~p~~f~lg~~~~---~i~g~e~~l~~Mk~GE~ 124 (365)
..++||.|+|+++|.|. .|..|+.|+|||++++ + |++||++ |++|.+|.| . +++||+.||..|++||+
T Consensus 22 ~~~~~~~~~~~~~g~g~~~p~~~~~v~v~y~g~~-~-g~~fd~~-----~~~f~lG~g-~~~~~~~~~e~al~~~~~Ge~ 93 (336)
T 1p5q_A 22 EEDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYY-K-DKLFDQR-----ELRFEIGEG-ENLDLPYGLERAIQRMEKGEH 93 (336)
T ss_dssp CCTTSEEEEEEECCCCSCCCCTTCEEEEEEEEEE-T-TEEEEEE-----EEEEETTCG-GGGTCCHHHHHHHTTCCTTCE
T ss_pred cCCCcEEEEEEeCCCCCCCCCCCCeEEEEEEEEE-C-CEEEecC-----CeEEEeCCC-CccccchHHHHHHhcCCCCCe
Confidence 34678999999999998 8999999999999998 5 8999986 899999988 5 58999999999999999
Q ss_pred EEEEeccccccCCCCCCCCCCCCCCCcEEEEEEEEeeecCcccccCCCCCHHHHHHHHHHhhhhhhhhhhhhhHHHHHHH
Q 017811 125 ALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGFDETKEGKARSDMTVEERIGAADRRKMDGNALFKEEKLEEAMQQ 204 (365)
Q Consensus 125 ~~~~i~~~~~yg~~g~~~~~~ip~~~~l~~~iel~~~~~~~~~~~~~~~~~~e~~~~a~~~k~~G~~~~~~~~y~~A~~~ 204 (365)
+.|.|+|.++||..|.. ...||+++++.|++.|.++..... .+.+..+.....+..+...|+.+++.|+|.+|+..
T Consensus 94 ~~l~i~p~~ayg~~g~~-~~~i~~~~~l~f~~~L~~~~~A~~---~~~~a~~~~p~~a~~~~~~g~~~~~~g~~~~A~~~ 169 (336)
T 1p5q_A 94 SIVYLKPSYAFGSVGKE-KFQIPPNAELKYELHLKSFEKAKE---SWEMNSEEKLEQSTIVKERGTVYFKEGKYKQALLQ 169 (336)
T ss_dssp EEEEECTTTTTTTTCBG-GGTBCSSCCEEEEEEEEEEECCCC---GGGCCHHHHHHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred EEEEECCccccCcCCCC-ccCCCCCCeEEEEEEEeecccccc---hhcCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
Confidence 99999999999999863 126999999999999999987654 78888888999999999999999999999999999
Q ss_pred HHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHcCCHH
Q 017811 205 YEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTD 284 (365)
Q Consensus 205 y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~~~p~n~ka~~~~g~a~~~l~~~~ 284 (365)
|++|+.+.|.+..+. .+.......+...+++|+|.||+++|+|++|+.+|+++|+++|+++++|+++|.+|..+|+|+
T Consensus 170 y~~Al~~~p~~~~~~--~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~ 247 (336)
T 1p5q_A 170 YKKIVSWLEYESSFS--NEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFE 247 (336)
T ss_dssp HHHHHHHTTTCCCCC--SHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHhhccccCC--hHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHH
Confidence 999999999864321 233344556667889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCC
Q 017811 285 AAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEIYKGIFGPRP 333 (365)
Q Consensus 285 ~A~~~l~~al~l~P~n~~~~~~l~~l~~~~~~~~~~~k~~y~kmf~~~~ 333 (365)
+|+.+|+++++++|++..+...+..+...++++.++++.+|++||+...
T Consensus 248 ~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~ 296 (336)
T 1p5q_A 248 LARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQLAREKKLYANMFERLA 296 (336)
T ss_dssp HHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999986544
No 4
>2f4e_A ATFKBP42; FKBP-like, alpha-beta, signaling protein; 2.32A {Arabidopsis thaliana}
Probab=99.97 E-value=4e-31 Score=226.33 Aligned_cols=180 Identities=74% Similarity=1.178 Sum_probs=121.0
Q ss_pred CcccCCCCCCCCCCCCCCcchhhccccccCCCCCCCCCCCCCCCCceeeeCCCeEEEEEecCCCCCCCCCCEEEEEEEEE
Q 017811 1 MEEVDGEPKSQAPGEVGESEIVTEDAAFVRGEPPQDGDGPPKVDSEVEVLHEKVTKQIIKEGHGQKPSKYSTCFLHYRAW 80 (365)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~k~v~~~G~g~~p~~g~~v~v~y~~~ 80 (365)
|+|+++... ....++.+.+.+..++....+....+.|++...++.++++||+|+++++|.|..|..||.|+|||+++
T Consensus 1 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~gl~~~vl~~G~G~~~~~Gd~V~v~Y~g~ 77 (180)
T 2f4e_A 1 MDESLEHQT---QTHDQESEIVTEGSAVVHSEPSQEGNVPPKVDSEAEVLDEKVSKQIIKEGHGSKPSKYSTCFLHYRAW 77 (180)
T ss_dssp ------------------------------------CCSCCCCCSCCEEEETTEEEEEEECCBSCCBCTTCEEEEEEEEE
T ss_pred ChhHhhhhh---ccCCccchhhhhhccccccCCCCcccCCcccCCCcEECCCceEEEEEeCCCCCCCCCCCEEEEEEEEE
Confidence 677777754 55667788999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCCeeeccCcCCCCcceeecCCCCchhhhHHHHHhcCCcCcEEEEEeccccccCCCCCCCCCCCCCCCcEEEEEEEEe
Q 017811 81 AESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIG 160 (365)
Q Consensus 81 ~~~~g~~fd~s~~~~~p~~f~lg~~~~~i~g~e~~l~~Mk~GE~~~~~i~~~~~yg~~g~~~~~~ip~~~~l~~~iel~~ 160 (365)
+.++|++||+++.++.|+.|.+|.+.++|+||+.+|.+|++||++.|.|||.++||..+...++.||||++|+|+|+|++
T Consensus 78 l~~dG~~fdss~~~~~p~~f~lG~g~~vi~G~eeaL~gMk~Ge~~~v~iPp~~aYG~~g~~~~~~Ip~~s~l~F~VeL~~ 157 (180)
T 2f4e_A 78 TKNSQHKFEDTWHEQQPIELVLGKEKKELAGLAIGVASMKSGERALVHVGWELAYGKEGNFSFPNVPPMADLLYEVEVIG 157 (180)
T ss_dssp ETTTCCEEEETTTTTCCEEEETTSCCGGGHHHHHHHTTCCBTCEEEEEECGGGTTTTTCBSSSSCBCTTCCEEEEEEEEE
T ss_pred ECCCCcEEeccCccCCCEEEEeCCCCchhHHHHHHHhCCCCCCEEEEEECchHhCCcCCcccCCCcCCCCeEEEEEEEEE
Confidence 98669999999888899999999863489999999999999999999999999999988532367999999999999999
Q ss_pred eecCcccccCCCCCHHHHHHHHH
Q 017811 161 FDETKEGKARSDMTVEERIGAAD 183 (365)
Q Consensus 161 ~~~~~~~~~~~~~~~~e~~~~a~ 183 (365)
+....+.+..|.|+.++++..|.
T Consensus 158 v~~~~e~~~~~~mt~eErl~~A~ 180 (180)
T 2f4e_A 158 FDETKEGKARSDMTVEERIGAAD 180 (180)
T ss_dssp ESCBCCC----------------
T ss_pred EecCccccccccCCHHHHHhhcC
Confidence 99887767789999999988763
No 5
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.93 E-value=2.5e-25 Score=218.52 Aligned_cols=214 Identities=17% Similarity=0.254 Sum_probs=177.4
Q ss_pred CCCeEEEEEecCCCC-CCCCCCEEEEEEEEEEcCCCeeeccCcCCCCcceeecCCCC--chhhhHHHHHhcCCcCcEEEE
Q 017811 51 HEKVTKQIIKEGHGQ-KPSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEK--KEMTGLAIGVSSMKAGEHALL 127 (365)
Q Consensus 51 ~~gv~k~v~~~G~g~-~p~~g~~v~v~y~~~~~~~g~~fd~s~~~~~p~~f~lg~~~--~~i~g~e~~l~~Mk~GE~~~~ 127 (365)
++++.++++++|.|. .|..|+.|+|||++++ + |++||++ +++|.+|.|. .+++||+.||..|+.||++.|
T Consensus 145 dg~~~k~i~~~g~~~~~p~~g~~V~v~y~g~~-~-g~~f~~~-----~~~f~~g~g~~~~v~~~~e~al~~~~~ge~~~l 217 (457)
T 1kt0_A 145 DGGIIRRTKRKGEGYSNPNEGATVEIHLEGRC-G-GRMFDCR-----DVAFTVGEGEDHDIPIGIDKALEKMQREEQCIL 217 (457)
T ss_dssp SSSEEEEEEECCBCSCCCCTTCEEEEEEEEEE-T-TEEEEEE-----EEEEETTCGGGGTCCHHHHHHHTTCCBTCEEEE
T ss_pred CcceEEEEEecCCCCCCCCCCCEEEEEEEEEe-C-CeEEecC-----ceEEEeCCCccccCChHHHHHHHhCCCCCEEEE
Confidence 457999999999997 8999999999999998 5 8999973 6899999762 389999999999999999999
Q ss_pred EeccccccCCCCCCCCCCCCCCCcEEEEEEEEeeecCcccccC-------------------------------------
Q 017811 128 HVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGFDETKEGKAR------------------------------------- 170 (365)
Q Consensus 128 ~i~~~~~yg~~g~~~~~~ip~~~~l~~~iel~~~~~~~~~~~~------------------------------------- 170 (365)
.++|.++||..|... ..|||++.+.|.+.+..+.+.......
T Consensus 218 ~i~P~~ay~~~g~~~-~~ip~~~~l~y~~~l~~~~~A~~~~~~~~~~~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~ 296 (457)
T 1kt0_A 218 YLGPRYGFGEAGKPK-FGIEPNAELIYEVTLKSFEKAKESWEMDTKEKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVS 296 (457)
T ss_dssp EECGGGTTCSSCBGG-GTBCTTCCEEEEEEEEEEECCCCGGGSCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred EECcccccCCCCCcc-cCCCCCCEEEEEhhhhhcccCcchhhcCHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 999999999998632 369999999999999988776532100
Q ss_pred ---C--CCCHH----HHHHHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHH
Q 017811 171 ---S--DMTVE----ERIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAA 241 (365)
Q Consensus 171 ---~--~~~~~----e~~~~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~ 241 (365)
. .+..+ .....+..+..+|..+++.++|.+|+..|++||.+.|.+. .+|+++|.
T Consensus 297 ~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~-----------------~a~~~~g~ 359 (457)
T 1kt0_A 297 WLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGLDSANE-----------------KGLYRRGE 359 (457)
T ss_dssp HHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCH-----------------HHHHHHHH
T ss_pred HhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccH-----------------HHHHHHHH
Confidence 0 00000 0111246677899999999999999999999999999863 35999999
Q ss_pred HHHHhcCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHcCCHHHHHHH
Q 017811 242 CLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAARED 289 (365)
Q Consensus 242 ~~~kl~~~~~A~~~~~~aL~~~p~n~ka~~~~g~a~~~l~~~~~A~~~ 289 (365)
||+.+++|++|+.+|+++|+++|++..+++.++.++..++++++|...
T Consensus 360 a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~~a~~~ 407 (457)
T 1kt0_A 360 AQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQKKAKEHNERDRR 407 (457)
T ss_dssp HHHHTTCHHHHHHHHHHHHTTC----CHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999988754
No 6
>2lkn_A AH receptor-interacting protein; FKBP-type domain, immunophilin homolog, protein binding; NMR {Homo sapiens}
Probab=99.93 E-value=2e-26 Score=192.56 Aligned_cols=116 Identities=18% Similarity=0.316 Sum_probs=99.7
Q ss_pred eeeCCCeEEEEEecCCCCCC--CCCCEEEEEEEEEEcC-CCeeeccCcCCCCcceeecCCCCchhhhHHHHHhcCCcCcE
Q 017811 48 EVLHEKVTKQIIKEGHGQKP--SKYSTCFLHYRAWAES-TRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSSMKAGEH 124 (365)
Q Consensus 48 ~~~~~gv~k~v~~~G~g~~p--~~g~~v~v~y~~~~~~-~g~~fd~s~~~~~p~~f~lg~~~~~i~g~e~~l~~Mk~GE~ 124 (365)
.++++||+|+|+++|+|..| ..|+.|+|||+|++.+ +|++||||+.+++|++|.||.+ +||+||+.||.+|++||+
T Consensus 6 ~~~~~Gv~~~vl~~G~G~~p~~~~G~~V~vhY~g~l~d~~G~~FDsS~~rg~P~~f~lG~g-~vI~Gwd~gl~~M~~Ge~ 84 (165)
T 2lkn_A 6 RLREDGIQKRVIQEGRGELPDFQDGTKATFHYRTLHSDDEGTVLDDSRARGKPMELIIGKK-FKLPVWETIVCTMREGEI 84 (165)
T ss_dssp HHHTTSCCCCEEECCSSCCCCCCTTCEEEEECEEECSSSSCCEEEESTTTTCCEEEESSSS-CSCSHHHHHHTTCCTTCE
T ss_pred cccCCCeEEEEEECCcCCCCCCCCCCEEEEEEEEEEeCCCccEEEecccCCCCEEEEecCC-CccHHHHHHHhcCccCce
Confidence 45689999999999999865 5799999999999863 4899999999999999999999 899999999999999999
Q ss_pred EEEEeccccccCCC--------CCCCCCC-----------------------------CCCCCcEEEEEEEEeeecCcc
Q 017811 125 ALLHVGWELGYGKE--------GSFSFPN-----------------------------VSPMADLVYEVVLIGFDETKE 166 (365)
Q Consensus 125 ~~~~i~~~~~yg~~--------g~~~~~~-----------------------------ip~~~~l~~~iel~~~~~~~~ 166 (365)
++|+|||+++||.. .. ... ++++++|+|+|||++++.+.+
T Consensus 85 ~~~~ipp~laYG~p~v~~~~r~~~--~~~~p~~~~~~~~g~~~~~~~~~~g~~d~~~li~~p~~L~FeIELl~Ve~P~e 161 (165)
T 2lkn_A 85 AQFLCDIKHVVLYPLVAKSLRNIA--VGKDPLEGQRHCCGVAQMREHSSLGHADLDALQQNPQPLIFHMEMLKVESPGT 161 (165)
T ss_dssp EEEECCHHHHSSHHHHHHHHTTGG--GSSTTTTTCSCCSSCCSCCCCCCCCCSTTTHHHHSCCCCEEEEEEEEEECTTT
T ss_pred EEEEECHHHhcCCcchhhhhhhcc--ccCCCccccccceeeeeccccccccccccccccCCCCCeEEEEEEEEEcCCcc
Confidence 99999999999920 00 011 234578999999999998765
No 7
>1jvw_A Macrophage infectivity potentiator; chagas disease, X-RAY rotamase, isomeras; 1.70A {Trypanosoma cruzi} SCOP: d.26.1.1
Probab=99.93 E-value=3e-25 Score=187.00 Aligned_cols=125 Identities=22% Similarity=0.366 Sum_probs=112.0
Q ss_pred ceeeeCCCeEEEEEecCCCCC-CCCCCEEEEEEEEEEcCCCeeeccCcCCCCcceeecCCCCchhhhHHHHHhcCCcCcE
Q 017811 46 EVEVLHEKVTKQIIKEGHGQK-PSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSSMKAGEH 124 (365)
Q Consensus 46 ~~~~~~~gv~k~v~~~G~g~~-p~~g~~v~v~y~~~~~~~g~~fd~s~~~~~p~~f~lg~~~~~i~g~e~~l~~Mk~GE~ 124 (365)
.+.++++||+|+++++|+|.. |..||.|+|||++++.+ |++||+++.++.|++|.+| ++|+||+.+|.+|++||+
T Consensus 31 ~~~~~~sGl~~~vl~~G~G~~~~~~gd~V~v~Y~g~l~d-G~~fdss~~~g~p~~f~lg---~vI~G~eeaL~gMk~Ge~ 106 (167)
T 1jvw_A 31 DAVKLPSGLVFQRIARGSGKRAPAIDDKCEVHYTGRLRD-GTVFDSSRERGKPTTFRPN---EVIKGWTEALQLMREGDR 106 (167)
T ss_dssp TEEECTTSCEEEEEECCCCSBCCCTTCCEEEEEEEECTT-SCEEEEHHHHTSCEEECGG---GSCHHHHHHHTTCCTTCE
T ss_pred CcEECCCCEEEEEEEcCCCCcCCCCCCEEEEEEEEEECC-CCEEeeccccCCCEEEEeC---chhHHHHHHHcCCCCCCE
Confidence 478899999999999999997 99999999999999887 9999999877789999996 789999999999999999
Q ss_pred EEEEeccccccCCCCCCCCCCCCCCCcEEEEEEEEeeecCcccccCCCCCHHHHHHH
Q 017811 125 ALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGFDETKEGKARSDMTVEERIGA 181 (365)
Q Consensus 125 ~~~~i~~~~~yg~~g~~~~~~ip~~~~l~~~iel~~~~~~~~~~~~~~~~~~e~~~~ 181 (365)
++|.|||.++||..|. ++.||||++|+|+|+|+++.+. .+.++.++..+.
T Consensus 107 ~~~~Ip~~laYG~~g~--~~~Ipp~s~LiF~VeL~~i~~~-----~~~~~~~e~~~~ 156 (167)
T 1jvw_A 107 WRLFIPYDLAYGVTGG--GGMIPPYSPLEFDVELISIKDG-----GKGRTAEEVDEI 156 (167)
T ss_dssp EEEEECGGGTTTTTCS--SSSSCTTCCEEEEEEEEEEGGG-----CCSCBHHHHHHH
T ss_pred EEEEECchhhCCCCCC--CCCcCCCCeEEEEEEEEEEEcC-----CCCCCHHHHHHH
Confidence 9999999999999987 4689999999999999999854 456666665333
No 8
>2jwx_A FKBP38NTD, FK506-binding protein 8 variant; apoptosis, beta barrel, central helix, with flexible N-terminal extension, isomerase; NMR {Homo sapiens}
Probab=99.93 E-value=7e-25 Score=182.70 Aligned_cols=138 Identities=21% Similarity=0.336 Sum_probs=121.1
Q ss_pred cchhhccccccCCCCCCCCCCCCCCCCceeeeCCCe-EEEEEecCCCC--CCCCCCEEEEEEEEEEcCCCeeeccCcCCC
Q 017811 19 SEIVTEDAAFVRGEPPQDGDGPPKVDSEVEVLHEKV-TKQIIKEGHGQ--KPSKYSTCFLHYRAWAESTRHKFDDTWLEQ 95 (365)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv-~k~v~~~G~g~--~p~~g~~v~v~y~~~~~~~g~~fd~s~~~~ 95 (365)
......+.+|+..++......+. ..++.+++++|+ +|+++++|+|. .|..||.|+|||++++.+ |++||++
T Consensus 10 ~~~~~~~~~fl~~~~~~~gv~~~-~~~~~~~~~sG~v~~~vl~~G~G~~~~p~~gd~V~v~Y~g~l~d-G~~fds~---- 83 (157)
T 2jwx_A 10 EQPGALAREFLAAMEPEPAPAPA-PEEWLDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLEN-GTRVQEE---- 83 (157)
T ss_dssp SSSSSSSCSSCSCCSSCCCCCCC-CCSCEESSSSSSEEEEEEECCSTTSCCCCTTEEEEEEEEEECTT-SCEEEEE----
T ss_pred ccchHHHHHHHHHhccCCCcccc-ccccceECCCCCEEEEEEEccCCCccCCCCCCEEEEEEEEEECC-CCEeecC----
Confidence 33445578899999888765544 456788999996 89999999997 899999999999999877 8999983
Q ss_pred CcceeecCCCCchhhhHHHHHhcCCcCcEEEEEeccccccCCCC-CCCCCCCCCCCcEEEEEEEEeeecCc
Q 017811 96 QPLEMVLGKEKKEMTGLAIGVSSMKAGEHALLHVGWELGYGKEG-SFSFPNVSPMADLVYEVVLIGFDETK 165 (365)
Q Consensus 96 ~p~~f~lg~~~~~i~g~e~~l~~Mk~GE~~~~~i~~~~~yg~~g-~~~~~~ip~~~~l~~~iel~~~~~~~ 165 (365)
.|++|.+|.+ ++|+||+.+|.+|++||+++|.|||.++||..+ . .+.||||++|+|+|+|+++....
T Consensus 84 ~p~~f~lG~g-~vi~G~eeaL~gMk~Ge~~~v~IP~~~aYG~~g~~--~~~IPp~stLiF~VeL~~i~~~~ 151 (157)
T 2jwx_A 84 PELVFTLGDC-DVIQALDLSVPLMDVGETAMVTADSKYCYGPQGSR--SPYIPPHAALCLEVTLKTAVDLE 151 (157)
T ss_dssp EEEEEETTTT-SSCHHHHHHTTTSCTTCEEEEEECGGGTTTTTCCS--SSCCCTTCCEEEEEEEEEEEECS
T ss_pred CCEEEEeCCC-ChhHHHHHHHcCCCCCCEEEEEECchhcCCccccc--CCCcCCCCeEEEEEEEEEEEccc
Confidence 7999999999 899999999999999999999999999999988 5 36799999999999999998754
No 9
>1yat_A FK506 binding protein; HET: FK5; 2.50A {Saccharomyces cerevisiae} SCOP: d.26.1.1
Probab=99.92 E-value=7.3e-25 Score=173.79 Aligned_cols=111 Identities=26% Similarity=0.453 Sum_probs=102.9
Q ss_pred eeeCCCeEEEEEecCCCCC-CCCCCEEEEEEEEEEcCCCeeeccCcCCCCcceeecCCCCchhhhHHHHHhcCCcCcEEE
Q 017811 48 EVLHEKVTKQIIKEGHGQK-PSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSSMKAGEHAL 126 (365)
Q Consensus 48 ~~~~~gv~k~v~~~G~g~~-p~~g~~v~v~y~~~~~~~g~~fd~s~~~~~p~~f~lg~~~~~i~g~e~~l~~Mk~GE~~~ 126 (365)
+++++|+.++++++|+|.. |..||.|+|||++++.+ |++||+++.++.|+.|.+|.+ ++|+||+.+|.+|++||++.
T Consensus 2 ~~~~~g~~~~~~~~G~g~~~~~~gd~V~v~y~~~~~d-G~~~d~s~~~~~p~~f~lG~~-~~i~g~e~~l~gm~~Ge~~~ 79 (113)
T 1yat_A 2 EVIEGNVKIDRISPGDGATFPKTGDLVTIHYTGTLEN-GQKFDSSVDRGSPFQCNIGVG-QVIKGWDVGIPKLSVGEKAR 79 (113)
T ss_dssp EECGGGCEEEEEECCCSSCCCCTTCEEEEEEEEEETT-SCEEEESTTTTCCEEEETTSS-SSCHHHHHHGGGCCTTCEEE
T ss_pred CCCCCCeEEEEEECCCCcccCCCCCEEEEEEEEEECC-CCEEEecCCCCCcEEEEeCCC-CccHHHHHHHhCCCCCCEEE
Confidence 4677899999999999996 99999999999999976 999999987778999999999 89999999999999999999
Q ss_pred EEeccccccCCCCCCCCCCCCCCCcEEEEEEEEeee
Q 017811 127 LHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGFD 162 (365)
Q Consensus 127 ~~i~~~~~yg~~g~~~~~~ip~~~~l~~~iel~~~~ 162 (365)
|.|||.++||+.+. ++.||||++|+|+|+|+++.
T Consensus 80 v~ip~~~ayG~~~~--~~~Ip~~~~l~f~vel~~ik 113 (113)
T 1yat_A 80 LTIPGPYAYGPRGF--PGLIPPNSTLVFDVELLKVN 113 (113)
T ss_dssp EEECGGGTTTTTCB--TTTBCTTCCEEEEEEEEEEC
T ss_pred EEECHHHCcCCCCC--CCCcCCCCeEEEEEEEEEeC
Confidence 99999999999886 35799999999999999863
No 10
>3o5e_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 1.60A {Homo sapiens} PDB: 3o5f_A
Probab=99.92 E-value=5.8e-25 Score=181.58 Aligned_cols=108 Identities=31% Similarity=0.545 Sum_probs=102.7
Q ss_pred CCCeEEEEEecCCCC-CCCCCCEEEEEEEEEEcCCCeeeccCcCCCCcceeecCCCCchhhhHHHHHhcCCcCcEEEEEe
Q 017811 51 HEKVTKQIIKEGHGQ-KPSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSSMKAGEHALLHV 129 (365)
Q Consensus 51 ~~gv~k~v~~~G~g~-~p~~g~~v~v~y~~~~~~~g~~fd~s~~~~~p~~f~lg~~~~~i~g~e~~l~~Mk~GE~~~~~i 129 (365)
++||+|+++++|+|. .|..||.|+|||++++.+ |++||+++.++.|+.|.+|.+ ++|+||+.+|.+|++||++.|.|
T Consensus 34 d~gv~~~i~~~G~G~~~p~~gd~V~v~Y~g~~~d-G~~fdss~~~~~p~~f~lG~g-~~i~G~e~~l~gm~~Ge~~~v~i 111 (144)
T 3o5e_A 34 DRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSN-GKKFDSSHDRNEPFVFSLGKG-QVIKAWDIGVATMKKGEICHLLC 111 (144)
T ss_dssp SSSEEEEEEECCBSSCCCCTTCEEEEEEEEECTT-SCEEEESGGGTSCEEEETTSS-SSCHHHHHHHTTCCBTCEEEEEE
T ss_pred CCeEEEEEEECCCCCccCCCCCEEEEEEEEEECC-CCEEEeecccCCCeEEEeCCC-cccHHHHHHHhCCCCCCEEEEEE
Confidence 679999999999998 899999999999999987 999999988889999999999 89999999999999999999999
Q ss_pred ccccccCCCCCCCCCCCCCCCcEEEEEEEEeee
Q 017811 130 GWELGYGKEGSFSFPNVSPMADLVYEVVLIGFD 162 (365)
Q Consensus 130 ~~~~~yg~~g~~~~~~ip~~~~l~~~iel~~~~ 162 (365)
||.++||..|. ++.||||++|+|+|+|+++.
T Consensus 112 pp~~aYG~~g~--~~~Ipp~~~L~f~VeL~~ik 142 (144)
T 3o5e_A 112 KPEYAYGSAGS--LPKIPSNATLFFEIELLDFK 142 (144)
T ss_dssp CGGGTTTTTCB--TTTBCTTCCEEEEEEEEEEE
T ss_pred ChHHCcCCCCC--CCCcCCCCeEEEEEEEEEec
Confidence 99999999987 47899999999999999885
No 11
>3oe2_A Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase, FK506; HET: TAR SRT; 1.60A {Pseudomonas syringae PV} SCOP: d.26.1.0
Probab=99.92 E-value=1.2e-25 Score=196.41 Aligned_cols=125 Identities=24% Similarity=0.412 Sum_probs=112.1
Q ss_pred chhhccccccCCCCCCCCCCCCCCCCceeeeCCCeEEEEEecCCCCCCCCCCEEEEEEEEEEcCCCeeeccCcCCCCcce
Q 017811 20 EIVTEDAAFVRGEPPQDGDGPPKVDSEVEVLHEKVTKQIIKEGHGQKPSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLE 99 (365)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~k~v~~~G~g~~p~~g~~v~v~y~~~~~~~g~~fd~s~~~~~p~~ 99 (365)
+...++.+|+..++...+ +.++++||+|+++++|+|..|..||.|+|||++++.+ |++||+| +.|++
T Consensus 94 ~~~~~~~~fl~~n~~~~g---------v~~~~sGl~y~vl~~G~G~~p~~gd~V~V~Y~g~l~d-G~vfDss---~~P~~ 160 (219)
T 3oe2_A 94 AALKAERTFMAGEKAKPG---------VKELADGILMTELTPGTGPKPDANGRVEVRYVGRLPD-GKIFDQS---TQPQW 160 (219)
T ss_dssp HHHHHHHHHHHHHHTSTT---------CEECGGGCEEEEEECCCSCCCCTTSEEEEEEEEECTT-SCEEEEC---SSCEE
T ss_pred HHHHHHHHHHHHhccCCC---------cEECCCCeEEEEEecCCCccCCCCCEEEEEEEEEECC-CCEeecc---CCcEE
Confidence 445556677766666653 7889999999999999999999999999999999987 9999998 78999
Q ss_pred eecCCCCchhhhHHHHHhcCCcCcEEEEEeccccccCCCCCCCCCCCCCCCcEEEEEEEEeee
Q 017811 100 MVLGKEKKEMTGLAIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGFD 162 (365)
Q Consensus 100 f~lg~~~~~i~g~e~~l~~Mk~GE~~~~~i~~~~~yg~~g~~~~~~ip~~~~l~~~iel~~~~ 162 (365)
|.+| ++|+||+.+|.+|++|++++|+|||.++||+.|. ++.||||++|+|+|+|+++.
T Consensus 161 f~lG---~vI~G~eeaL~gMk~Gek~~v~IPp~lAYG~~g~--~~~IPpnstLvFeVeLl~Ik 218 (219)
T 3oe2_A 161 FRLD---SVISGWTSALQNMPTGAKWRLVIPSDQAYGAEGA--GDLIDPFTPLVFEIELIAVS 218 (219)
T ss_dssp EEGG---GSCHHHHHHHTTCCTTCEEEEEECGGGTTTTTCB--TTTBCTTCCEEEEEEEEEEE
T ss_pred EEec---chhHHHHHHHhCCCCCCEEEEEECchhcCCCCCC--CCCCCCCCeEEEEEEEEEEe
Confidence 9998 6899999999999999999999999999999987 35699999999999999885
No 12
>3kz7_A FK506-binding protein 3; FKPB ppiase rapamycin, isomerase, nucleus, phosphoprotein, R isomerase-inhibitor complex; HET: RAP; 1.95A {Mus musculus} SCOP: d.26.1.1 PDB: 1pbk_A*
Probab=99.92 E-value=7e-25 Score=175.56 Aligned_cols=110 Identities=29% Similarity=0.412 Sum_probs=100.3
Q ss_pred eCCCeEEEEEecCCCC-CCCCCCEEEEEEEEEEcCCCeeeccCcCC-------CCcceeecCCCCchhhhHHHHHhcCCc
Q 017811 50 LHEKVTKQIIKEGHGQ-KPSKYSTCFLHYRAWAESTRHKFDDTWLE-------QQPLEMVLGKEKKEMTGLAIGVSSMKA 121 (365)
Q Consensus 50 ~~~gv~k~v~~~G~g~-~p~~g~~v~v~y~~~~~~~g~~fd~s~~~-------~~p~~f~lg~~~~~i~g~e~~l~~Mk~ 121 (365)
+++||+|+|+++|+|. .|..||.|+|||++++.+ |++||+|+.. +.|+.|.+|.+ ++|+||+.+|.+|++
T Consensus 2 ~p~g~~~~il~~G~g~~~p~~gd~V~v~Y~g~~~d-G~~fdss~~~~~~~~~~~~p~~f~lG~~-~~i~G~e~~l~gm~~ 79 (119)
T 3kz7_A 2 GPPKYTKSILKKGDKTNFPKKGDVVHCWYTGTLPD-GTVFDTNIQTSSKKKKNAKPLSFKVGVG-KVIRGWDEALLTMSK 79 (119)
T ss_dssp CSCSEEEEEEECCCSSCCCCTTCEEEEEEEEECTT-SCEEEECCCCSSSTTTTCCCEEEETTSS-SSCHHHHHHHTTCCT
T ss_pred CCCccEEEEEEcCCCCCcCCCCCEEEEEEEEEECC-CCEEEeccccccccccCCCCEEEEECCC-ChhHHHHHHHhCCCC
Confidence 4689999999999997 799999999999999987 9999999753 47999999999 899999999999999
Q ss_pred CcEEEEEeccccccCCCCCCCCCCCCCCCcEEEEEEEEeee
Q 017811 122 GEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGFD 162 (365)
Q Consensus 122 GE~~~~~i~~~~~yg~~g~~~~~~ip~~~~l~~~iel~~~~ 162 (365)
||++.|.|||.++||+.|.. ...||||++|+|+|+|+++.
T Consensus 80 Ge~~~v~ip~~~aYG~~g~~-~~~Ip~~~~l~f~veL~~i~ 119 (119)
T 3kz7_A 80 GEKARLEIEPEWAYGKKGQP-DAKIPPNTKLIFEVELVDID 119 (119)
T ss_dssp TCEEEEEECGGGTTCTTCBG-GGTBCTTCCEEEEEEEEEEC
T ss_pred CCEEEEEECcHHhcCCCCCC-CCccCcCCeEEEEEEEEEeC
Confidence 99999999999999999862 13799999999999999873
No 13
>3o5q_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 0.96A {Homo sapiens} PDB: 3o5m_A 3o5l_A 3o5o_A 3o5p_A 3o5r_A* 4drk_A* 4drm_A* 4drn_A* 4dro_A* 4drp_A* 4drq_A* 3o5j_A 3o5g_A 3o5i_A 3o5k_A
Probab=99.92 E-value=8.9e-25 Score=177.02 Aligned_cols=110 Identities=30% Similarity=0.526 Sum_probs=103.0
Q ss_pred eCCCeEEEEEecCCCC-CCCCCCEEEEEEEEEEcCCCeeeccCcCCCCcceeecCCCCchhhhHHHHHhcCCcCcEEEEE
Q 017811 50 LHEKVTKQIIKEGHGQ-KPSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSSMKAGEHALLH 128 (365)
Q Consensus 50 ~~~gv~k~v~~~G~g~-~p~~g~~v~v~y~~~~~~~g~~fd~s~~~~~p~~f~lg~~~~~i~g~e~~l~~Mk~GE~~~~~ 128 (365)
.++||+|+++++|+|. .|..||.|+|||++++.+ |++||+++.++.|+.|.+|.+ ++|+||+.+|.+|++||++.|.
T Consensus 17 ~d~gv~~~i~~~G~G~~~p~~gd~V~v~Y~g~~~d-G~~fdss~~~~~p~~f~lG~g-~~i~G~e~~l~gm~~Ge~~~v~ 94 (128)
T 3o5q_A 17 KDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSN-GKKFDSSHDRNEPFVFSLGKG-QVIKAWDIGVATMKKGEICHLL 94 (128)
T ss_dssp CSSSEEEEEEECCSSSCCCCTTCEEEEEEEEEETT-SCEEEEHHHHTSCEEEETTSS-SSCHHHHHHHTTCCTTCEEEEE
T ss_pred CCCCEEEEEEECCCCCccCCCCCEEEEEEEEEECC-CCEEEecCCCCCCEEEEECCC-CccHHHHHHHhcCCCCCEEEEE
Confidence 4679999999999998 799999999999999987 899999987788999999999 8999999999999999999999
Q ss_pred eccccccCCCCCCCCCCCCCCCcEEEEEEEEeeec
Q 017811 129 VGWELGYGKEGSFSFPNVSPMADLVYEVVLIGFDE 163 (365)
Q Consensus 129 i~~~~~yg~~g~~~~~~ip~~~~l~~~iel~~~~~ 163 (365)
|||.++||+.|. ++.|||+++|+|+|+|+++..
T Consensus 95 ip~~~aYG~~g~--~~~Ip~~~~l~f~vel~~i~~ 127 (128)
T 3o5q_A 95 CKPEYAYGSAGS--LPKIPSNATLFFEIELLDFKG 127 (128)
T ss_dssp ECGGGTTTTTCB--TTTBCTTCCEEEEEEEEEEEC
T ss_pred EChHHcCCCCCC--CCCcCCCCEEEEEEEEEEecC
Confidence 999999999987 468999999999999998863
No 14
>2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET: SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A 2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A*
Probab=99.92 E-value=2.2e-24 Score=175.47 Aligned_cols=112 Identities=30% Similarity=0.479 Sum_probs=104.2
Q ss_pred ceeeeCCCeEEEEEecCCCCCCCCCCEEEEEEEEEEcCCCeeeccCcCCCCcceeecCCCCchhhhHHHHHhcCCcCcEE
Q 017811 46 EVEVLHEKVTKQIIKEGHGQKPSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSSMKAGEHA 125 (365)
Q Consensus 46 ~~~~~~~gv~k~v~~~G~g~~p~~g~~v~v~y~~~~~~~g~~fd~s~~~~~p~~f~lg~~~~~i~g~e~~l~~Mk~GE~~ 125 (365)
.+.++++|+.++++++|+|..|..||.|+|+|++++.+ |++||+++.+++|++|.+|.+ ++|+||+++|.+|++||++
T Consensus 22 ~~~~~~~gl~~~~l~~G~G~~~~~gd~V~v~Y~g~~~d-G~~fdss~~~~~p~~f~lG~g-~vi~G~eeaL~gmk~Ge~~ 99 (133)
T 2y78_A 22 TVVTTESGLKYEDLTEGSGAEARAGQTVSVHYTGWLTD-GQKFDSSKDRNDPFAFVLGGG-MVIKGWDEGVQGMKVGGVR 99 (133)
T ss_dssp CCEECTTSCEEEEEECCSSCBCCTTSEEEEEEEEEETT-SCEEEETTTTTCCEEEETTSS-SSCHHHHHHSTTCBTTCEE
T ss_pred CcEECCCCEEEEEEEcCCCCCCCCCCEEEEEEEEEECC-CCEEeccCcCCCCEEEEeCCC-ChhHHHHHHHcCCCCCCEE
Confidence 36778899999999999999999999999999999976 999999987788999999999 8999999999999999999
Q ss_pred EEEeccccccCCCCCCCCCCCCCCCcEEEEEEEEee
Q 017811 126 LLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGF 161 (365)
Q Consensus 126 ~~~i~~~~~yg~~g~~~~~~ip~~~~l~~~iel~~~ 161 (365)
+|.|||.++||+.+. .+.||||++|+|+|+|+++
T Consensus 100 ~v~ip~~~aYG~~~~--~~~Ipp~~~l~f~VeL~~I 133 (133)
T 2y78_A 100 RLTIPPQLGYGARGA--GGVIPPNATLVFEVELLDV 133 (133)
T ss_dssp EEEECGGGTTTTTCB--TTTBCTTCCEEEEEEEEEC
T ss_pred EEEECcHHhCCCCCC--CCCCCCCCeEEEEEEEEEC
Confidence 999999999999886 3579999999999999874
No 15
>3b7x_A FK506-binding protein 6; isomerase, repeat, rotamase, TPR repeat, williams-beuren syndrome, structural genomics consortium, SGC; 2.10A {Homo sapiens}
Probab=99.92 E-value=6e-25 Score=179.33 Aligned_cols=110 Identities=26% Similarity=0.495 Sum_probs=95.5
Q ss_pred eCCCeEEEEEecCCCCCCCCCCEEEEEEEEEEcCCCeeeccCcCCCCcceeecCCCCchhhhHHHHHhcCCcCcEEEEEe
Q 017811 50 LHEKVTKQIIKEGHGQKPSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSSMKAGEHALLHV 129 (365)
Q Consensus 50 ~~~gv~k~v~~~G~g~~p~~g~~v~v~y~~~~~~~g~~fd~s~~~~~p~~f~lg~~~~~i~g~e~~l~~Mk~GE~~~~~i 129 (365)
+++||+|+++++|+|..|..||.|+|||++++.++|++||+++.++.|+.|.+|.+ ++|+||+.+|.+|++||++.|+|
T Consensus 24 ~~~gl~~~vl~~G~g~~~~~gd~V~v~Y~g~l~~~G~~fdss~~~~~p~~f~lG~g-~~i~G~e~aL~gm~~Ge~~~v~i 102 (134)
T 3b7x_A 24 GDRGVLKDVIREGAGDLVAPDASVLVKYSGYLEHMDRPFDSNYFRKTPRLMKLGED-ITLWGMELGLLSMRRGELARFLF 102 (134)
T ss_dssp SSSSEEEEEEECCEEEECCTTCEEEEEEEEECTTCSSCSEEC-------CEEC-CC-CCCHHHHHHHHTCEETCEEEEEE
T ss_pred CCCCEEEEEEEcCCCCCCCCCCEEEEEEEEEECCCCeEEEecCCCCCCEEEEcCCc-chhHHHHHHHhCCCCCCEEEEEE
Confidence 57899999999999998889999999999998855999999987778999999999 89999999999999999999999
Q ss_pred ccccccCCCCCCCCCCCCCCCcEEEEEEEEeee
Q 017811 130 GWELGYGKEGSFSFPNVSPMADLVYEVVLIGFD 162 (365)
Q Consensus 130 ~~~~~yg~~g~~~~~~ip~~~~l~~~iel~~~~ 162 (365)
||.++||+.+. ++.||||++|+|+|+|+++.
T Consensus 103 p~~~aYG~~~~--~~~Ip~~~~l~f~VeL~~i~ 133 (134)
T 3b7x_A 103 KPNYAYGTLGC--PPLIPPNTTVLFEIELLDFL 133 (134)
T ss_dssp CGGGTTTTTCB--TTTBCTTCCEEEEEEEEEEC
T ss_pred CHHHCcCCCCC--CCCcCcCCeEEEEEEEEEEe
Confidence 99999999887 45799999999999999875
No 16
>2ppn_A FK506-binding protein 1A; high resolution protein structure, isomerase; 0.92A {Homo sapiens} SCOP: d.26.1.1 PDB: 1b6c_A 1a7x_A 1d7h_A 1d7i_A 1d7j_A* 1f40_A* 1fap_A* 1d6o_A* 1fkd_A* 1fkf_A* 1fkg_A* 1fkh_A* 1fki_A* 1fkj_A* 1fkr_A 1fks_A 1fkt_A 1j4h_A* 1j4i_A* 1j4r_A* ...
Probab=99.91 E-value=2.5e-24 Score=169.05 Aligned_cols=106 Identities=31% Similarity=0.594 Sum_probs=98.8
Q ss_pred CeEEEEEecCCCCC-CCCCCEEEEEEEEEEcCCCeeeccCcCCCCcceeecCCCCchhhhHHHHHhcCCcCcEEEEEecc
Q 017811 53 KVTKQIIKEGHGQK-PSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSSMKAGEHALLHVGW 131 (365)
Q Consensus 53 gv~k~v~~~G~g~~-p~~g~~v~v~y~~~~~~~g~~fd~s~~~~~p~~f~lg~~~~~i~g~e~~l~~Mk~GE~~~~~i~~ 131 (365)
||+++++++|+|.. |..||.|+|||++++.+ |++||+++.+++|+.|.+|.+ ++|+||+.+|.+|++||++.|.|||
T Consensus 1 Gl~~~~~~~G~g~~~~~~gd~V~v~y~~~~~d-G~~~d~s~~~~~p~~f~lG~~-~~i~g~~~~l~gm~~Ge~~~~~ip~ 78 (107)
T 2ppn_A 1 GVQVETISPGDGRTFPKRGQTCVVHYTGMLED-GKKFDSSRDRNKPFKFMLGKQ-EVIRGWEEGVAQMSVGQRAKLTISP 78 (107)
T ss_dssp CEEEEEEECCCSSCCCCTTCEEEEEEEEEETT-SCEEEEHHHHTSCEEEETTSC-CSCHHHHHHHTTCCTTCEEEEEECG
T ss_pred CcEEEEEECcCCCcCCCCCCEEEEEEEEEECC-CCEEEecCCCCCCEEEEeCCC-ChHHHHHHHHhCCCCCCEEEEEECH
Confidence 78999999999985 99999999999999986 999999987678999999999 8999999999999999999999999
Q ss_pred ccccCCCCCCCCCCCCCCCcEEEEEEEEeee
Q 017811 132 ELGYGKEGSFSFPNVSPMADLVYEVVLIGFD 162 (365)
Q Consensus 132 ~~~yg~~g~~~~~~ip~~~~l~~~iel~~~~ 162 (365)
.++||+.+. ++.||||++++|+|+|++++
T Consensus 79 ~~ayG~~~~--~~~Ip~~~~l~f~v~l~~v~ 107 (107)
T 2ppn_A 79 DYAYGATGH--PGIIPPHATLVFDVELLKLE 107 (107)
T ss_dssp GGTTTTTCB--TTTBCTTCCEEEEEEEEEEC
T ss_pred HHccCCCCC--CCCcCCCCeEEEEEEEEEeC
Confidence 999999886 46799999999999999863
No 17
>2awg_A 38 kDa FK-506 binding protein; FKBP-type, ppiase, BCL-2 inhibitor, SHH signalling antagonist, structural genomics consortium, SGC; 1.60A {Homo sapiens} PDB: 2f2d_A 3ey6_A
Probab=99.91 E-value=6.4e-24 Score=169.59 Aligned_cols=112 Identities=23% Similarity=0.359 Sum_probs=103.4
Q ss_pred CCCceeeeCCC-eEEEEEecCCCC--CCCCCCEEEEEEEEEEcCCCeeeccCcCCCCcceeecCCCCchhhhHHHHHhcC
Q 017811 43 VDSEVEVLHEK-VTKQIIKEGHGQ--KPSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSSM 119 (365)
Q Consensus 43 ~~~~~~~~~~g-v~k~v~~~G~g~--~p~~g~~v~v~y~~~~~~~g~~fd~s~~~~~p~~f~lg~~~~~i~g~e~~l~~M 119 (365)
.+++++++++| ++|+++++|+|. .|..||.|+|||++++.+ |++||++ .|+.|.+|.+ ++|+||+.+|.+|
T Consensus 3 ~~~~~~~~~~g~~~~~vl~~G~G~~~~~~~gd~V~v~y~g~~~d-G~~~ds~----~p~~f~lG~~-~~i~g~e~~l~gm 76 (118)
T 2awg_A 3 PEEWLDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLEN-GTRVQEE----PELVFTLGDC-DVIQALDLSVPLM 76 (118)
T ss_dssp TTCEEESSSSSSEEEEEEECCCTTCCCCCTTSEEEEEEEEECTT-SCEEEEE----EEEEEETTSS-CSCHHHHHHGGGS
T ss_pred cccceEECCCCCEEEEEEEcCCCCCccCCCCCEEEEEEEEEECC-CCEEECC----CCEEEEECCC-ChhHHHHHHHhCC
Confidence 45688899888 999999999997 899999999999999876 8999983 7999999999 8999999999999
Q ss_pred CcCcEEEEEeccccccCCCCCCCCCCCCCCCcEEEEEEEEeee
Q 017811 120 KAGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGFD 162 (365)
Q Consensus 120 k~GE~~~~~i~~~~~yg~~g~~~~~~ip~~~~l~~~iel~~~~ 162 (365)
++||++.|.|||.++||..+. ++.|||+++|+|+|+|+++.
T Consensus 77 ~~Ge~~~~~ip~~~ayG~~~~--~~~Ip~~~~l~f~v~l~~v~ 117 (118)
T 2awg_A 77 DVGETAMVTADSKYCYGPQGR--SPYIPPHAALCLEVTLKTAV 117 (118)
T ss_dssp CTTCEEEEEECGGGTTTTTCB--TTTBCTTCCEEEEEEEEEEE
T ss_pred CCCCEEEEEEChHHccCCCCC--CCccCCCCeEEEEEEEEEec
Confidence 999999999999999999886 46799999999999999875
No 18
>4dip_A Peptidyl-prolyl CIS-trans isomerase FKBP14; structural genomics, structural genomics consortium, SGC, PE prolyl CIS-trans isomerase; 1.82A {Homo sapiens}
Probab=99.91 E-value=4.5e-24 Score=172.29 Aligned_cols=115 Identities=23% Similarity=0.415 Sum_probs=104.6
Q ss_pred ceeeeCCCeEEEEEecCC--CCCCCCCCEEEEEEEEEEcCCCeeeccCcC--CCCcceeecCCCCchhhhHHHHHhcCCc
Q 017811 46 EVEVLHEKVTKQIIKEGH--GQKPSKYSTCFLHYRAWAESTRHKFDDTWL--EQQPLEMVLGKEKKEMTGLAIGVSSMKA 121 (365)
Q Consensus 46 ~~~~~~~gv~k~v~~~G~--g~~p~~g~~v~v~y~~~~~~~g~~fd~s~~--~~~p~~f~lg~~~~~i~g~e~~l~~Mk~ 121 (365)
.+.+.++|++++++++|. |..|..||.|+|||++++.++|++||+++. .+.|+.|.+|.+ ++|+||+.+|.+|++
T Consensus 6 ~~~~~~~gl~~~~l~~g~~~g~~~~~gd~V~v~Y~g~~~~dG~~fdss~~~~~~~p~~f~lG~~-~~i~G~e~~l~gm~~ 84 (125)
T 4dip_A 6 GALIPEPEVKIEVLQKPFICHRKTKGGDLMLVHYEGYLEKDGSLFHSTHKHNNGQPIWFTLGIL-EALKGWDQGLKGMCV 84 (125)
T ss_dssp GGGCCCCCCEEEEEECCSCCSCCCCTTCEEEEEEEEEETTTCCEEEEHHHHTTTCCEEEETTSC-SSCHHHHHHSTTCCT
T ss_pred ceEECCCCeEEEEEEcCCCCCCcCCCCCEEEEEEEEEECCCCcEEEEcccCCCCcCEEEEeCCC-ChhHHHHHHHhCCCC
Confidence 456678899999999998 679999999999999999833999999874 468999999999 899999999999999
Q ss_pred CcEEEEEeccccccCCCCCCCCCCCCCCCcEEEEEEEEeeecC
Q 017811 122 GEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGFDET 164 (365)
Q Consensus 122 GE~~~~~i~~~~~yg~~g~~~~~~ip~~~~l~~~iel~~~~~~ 164 (365)
||++.|.|||.++||+.+. +.||||++|+|+|+|+++.+.
T Consensus 85 Ge~~~~~ip~~~aYG~~g~---~~Ip~~~~l~f~vel~~i~~~ 124 (125)
T 4dip_A 85 GEKRKLIIPPALGYGKEGK---GKIPPESTLIFNIDLLEIRNG 124 (125)
T ss_dssp TCEEEEEECGGGTTTTTCB---TTBCTTCCEEEEEEEEEEECC
T ss_pred CCEEEEEEChHHhcCCCCC---CCCCCCCeEEEEEEEEEEEcC
Confidence 9999999999999999986 589999999999999998753
No 19
>1fd9_A Protein (macrophage infectivity potentiator prote; FKBP domain, long alpha helix, dimerisation VIA helical INTE isomerase; 2.41A {Legionella pneumophila} SCOP: d.26.1.1 PDB: 2uz5_A 2vcd_A*
Probab=99.91 E-value=4.5e-24 Score=186.55 Aligned_cols=112 Identities=24% Similarity=0.347 Sum_probs=104.9
Q ss_pred ceeeeCCCeEEEEEecCCCCCCCCCCEEEEEEEEEEcCCCeeeccCcCCCCcceeecCCCCchhhhHHHHHhcCCcCcEE
Q 017811 46 EVEVLHEKVTKQIIKEGHGQKPSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSSMKAGEHA 125 (365)
Q Consensus 46 ~~~~~~~gv~k~v~~~G~g~~p~~g~~v~v~y~~~~~~~g~~fd~s~~~~~p~~f~lg~~~~~i~g~e~~l~~Mk~GE~~ 125 (365)
.+.++++|++|+|+++|+|..|..||.|+|||++++.+ |++||+++.++.|++|.+| ++|+||+++|.+|++|+++
T Consensus 100 ~v~~~~sGl~y~vl~~G~G~~p~~gD~V~V~Y~g~l~d-G~vfdss~~~g~p~~f~lg---~vI~G~eeaL~gMk~Gek~ 175 (213)
T 1fd9_A 100 GVVVLPSGLQYKVINSGNGVKPGKSDTVTVEYTGRLID-GTVFDSTEKTGKPATFQVS---QVIPGWTEALQLMPAGSTW 175 (213)
T ss_dssp TEEECTTSCEEEEEECCCSCCCCTTCEEEEEEEEEETT-SCEEEEHHHHCSCEEEEGG---GSCHHHHHHHTTCCTTCEE
T ss_pred CcEECCCccEEEEEecCCCccCCCCCEEEEEEEEEECC-CCEEeeccccCCCEEEEcC---chhhHHHHHHcCCCCCCEE
Confidence 37889999999999999999999999999999999987 9999999877889999996 7899999999999999999
Q ss_pred EEEeccccccCCCCCCCCCCCCCCCcEEEEEEEEeeec
Q 017811 126 LLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGFDE 163 (365)
Q Consensus 126 ~~~i~~~~~yg~~g~~~~~~ip~~~~l~~~iel~~~~~ 163 (365)
+|+|||.++||+.|. ++.||||++|+|+|+|+++.+
T Consensus 176 ~v~IP~~laYG~~g~--~~~Ipp~stLiF~VeLl~v~~ 211 (213)
T 1fd9_A 176 EIYVPSGLAYGPRSV--GGPIGPNETLIFKIHLISVKK 211 (213)
T ss_dssp EEEECGGGTTTTCCC--SSSCCTTCCEEEEEEEEEEEC
T ss_pred EEEECchhccCccCC--CCCCCCCCeEEEEEEEEEEEc
Confidence 999999999999886 467999999999999999875
No 20
>1r9h_A FKB-6, FK506 binding protein family; structural genomics, peptidylprolyl isomerase, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: d.26.1.1
Probab=99.91 E-value=5.9e-24 Score=173.66 Aligned_cols=111 Identities=32% Similarity=0.504 Sum_probs=102.8
Q ss_pred eCCCeEEEEEecCCCC-CCCCCCEEEEEEEEEEcCCCeeeccCcCCCCcceeecCCCCchhhhHHHHHhcCCcCcEEEEE
Q 017811 50 LHEKVTKQIIKEGHGQ-KPSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSSMKAGEHALLH 128 (365)
Q Consensus 50 ~~~gv~k~v~~~G~g~-~p~~g~~v~v~y~~~~~~~g~~fd~s~~~~~p~~f~lg~~~~~i~g~e~~l~~Mk~GE~~~~~ 128 (365)
+++||+|+++++|+|. .|..||.|+|||++++.+ |++||+++.++.|++|.+|.+ ++|+||+.+|.+|++||++.|.
T Consensus 12 ~~~gl~~~~l~~G~g~~~~~~gd~V~v~Y~g~~~d-G~~fdss~~~~~p~~f~lG~~-~vi~G~e~~l~gm~~Ge~~~v~ 89 (135)
T 1r9h_A 12 KDGGVLKLIKKEGQGVVKPTTGTTVKVHYVGTLEN-GTKFDSSRDRGDQFSFNLGRG-NVIKGWDLGVATMTKGEVAEFT 89 (135)
T ss_dssp CCSSEEEEEEECCBSSCCCCTTCEEEEEEEEEETT-SCEEEEHHHHTSCEEEETTTT-SSCHHHHHHHTTCCBTCEEEEE
T ss_pred CCCcEEEEEEEccCCCcCCCCCCEEEEEEEEEECC-CCEEEecCcCCCCEEEEeCCC-CccHHHHHHHhcCCCCCEEEEE
Confidence 4579999999999998 799999999999999877 999999977678999999998 8999999999999999999999
Q ss_pred eccccccCCCCCCCCCCCCCCCcEEEEEEEEeeecC
Q 017811 129 VGWELGYGKEGSFSFPNVSPMADLVYEVVLIGFDET 164 (365)
Q Consensus 129 i~~~~~yg~~g~~~~~~ip~~~~l~~~iel~~~~~~ 164 (365)
|||.++||+.+. ++.||++++|+|+|+|+++...
T Consensus 90 ip~~~aYG~~g~--~~~Ip~~~~l~f~v~l~~i~~~ 123 (135)
T 1r9h_A 90 IRSDYGYGDAGS--PPKIPGGATLIFEVELFEWSAE 123 (135)
T ss_dssp ECGGGTTTTTCB--TTTBCTTCCEEEEEEEEEEEC-
T ss_pred EChHHcCCCCCC--CCCcCcCCcEEEEEEEEEeecC
Confidence 999999999887 4789999999999999999764
No 21
>2lgo_A FKBP; infectious disease, isomerase, giardiasis, ssgcid, structura genomics, seattle structural genomics center for infectious; NMR {Giardia lamblia}
Probab=99.91 E-value=4.8e-24 Score=172.91 Aligned_cols=111 Identities=27% Similarity=0.499 Sum_probs=101.3
Q ss_pred eeeeCCCeEEE--EEecCCCCC-CCCCCEEEEEEEEEEcCCCeeeccCcCCCCcceeecCCCCchhhhHHHHHhcCCcCc
Q 017811 47 VEVLHEKVTKQ--IIKEGHGQK-PSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSSMKAGE 123 (365)
Q Consensus 47 ~~~~~~gv~k~--v~~~G~g~~-p~~g~~v~v~y~~~~~~~g~~fd~s~~~~~p~~f~lg~~~~~i~g~e~~l~~Mk~GE 123 (365)
+..+++|+.++ ++++|+|.. |..||.|+|+|++++.+ |++||+++.++.|+.|.+|.+ ++|+||+.+|.+|++||
T Consensus 17 ~~~~~~Gl~~~K~~l~~G~G~~~~~~gd~V~v~Y~g~~~d-G~~fdss~~~~~p~~f~lG~g-~vi~G~e~aL~gm~~Ge 94 (130)
T 2lgo_A 17 QGPGSMSAQLEKKVLTPGDGVTKPQAGKKVTVHYDGRFPD-GKQFDSSRSRGKPFQFTLGAG-EVIKGWDQGVATMTLGE 94 (130)
T ss_dssp CSSSSSSCCCCEEEEECCCSSCCCCTTSEEEEEEEEECTT-SCEEECTTTTTCCEEEETTST-TSCHHHHHHHHHSCTTE
T ss_pred ceeCCCceEEEEEEEeccCCCccCCCCCEEEEEEEEEECC-CCEEEccCcCCCCEEEEeCCC-CccHHHHHHHhCCCCCC
Confidence 44556888777 999999996 99999999999999876 999999987778999999999 89999999999999999
Q ss_pred EEEEEeccccccCCCCCCCCCCCCCCCcEEEEEEEEee
Q 017811 124 HALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGF 161 (365)
Q Consensus 124 ~~~~~i~~~~~yg~~g~~~~~~ip~~~~l~~~iel~~~ 161 (365)
++.|.|||.++||+.+. ++.||||++|+|+|+|+++
T Consensus 95 ~~~v~ip~~~aYG~~~~--~~~Ip~~~~l~f~VeL~~i 130 (130)
T 2lgo_A 95 KALFTIPYQLAYGERGY--PPVIPPKATLVFEVELLAV 130 (130)
T ss_dssp EEEEEECTTTSTTTTCC--STTSCSSCCEEEEEEEEEC
T ss_pred EEEEEECcHHHCCCCCC--CCCcCCCCeEEEEEEEEEC
Confidence 99999999999999886 4679999999999999874
No 22
>2vn1_A 70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR repeat; HET: FK5; 2.35A {Plasmodium falciparum} PDB: 2ofn_A 2ki3_A 3ihz_A* 3ni6_A 3pa7_A
Probab=99.91 E-value=1.2e-23 Score=170.73 Aligned_cols=114 Identities=29% Similarity=0.480 Sum_probs=101.9
Q ss_pred ceeeeCCC-eEEEEEecC---CCCCCCCCCEEEEEEEEEE-cCCCeeeccCcCCCCcceeecCCCCchhhhHHHHHhcCC
Q 017811 46 EVEVLHEK-VTKQIIKEG---HGQKPSKYSTCFLHYRAWA-ESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSSMK 120 (365)
Q Consensus 46 ~~~~~~~g-v~k~v~~~G---~g~~p~~g~~v~v~y~~~~-~~~g~~fd~s~~~~~p~~f~lg~~~~~i~g~e~~l~~Mk 120 (365)
.+.++++| ++++++++| .|..|..||.|+|||++++ .+ |++||+++.++.|++|.+|.+ ++|+||+.+|.+|+
T Consensus 9 ~~~~~~~g~~~~~il~~G~~g~g~~~~~gd~V~v~Y~g~~~~d-G~~fd~s~~~~~p~~f~lG~g-~~i~g~e~~l~gm~ 86 (129)
T 2vn1_A 9 KVELTADGGVIKTILKKGDEGEENIPKKGNEVTVHYVGKLEST-GKVFDSSFDRNVPFKFHLEQG-EVIKGWDICVSSMR 86 (129)
T ss_dssp EEECSTTSSEEEEEEECCCCSGGGSCCTTCEEEEEEEEEETTT-CCEEEEGGGTTCCEEEETTSS-SSCHHHHHHHTTCC
T ss_pred CcEECCCCCEEEEEEeCCCCCCCCcCCCCCEEEEEEEEEECCC-CeEEEecCCCCccEEEEeCCC-CcCHHHHHHHhCCC
Confidence 46777777 556799966 4568999999999999998 55 999999987778999999998 89999999999999
Q ss_pred cCcEEEEEeccccccCCCCCCCCCCCCCCCcEEEEEEEEeeec
Q 017811 121 AGEHALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGFDE 163 (365)
Q Consensus 121 ~GE~~~~~i~~~~~yg~~g~~~~~~ip~~~~l~~~iel~~~~~ 163 (365)
+||++.|.|||.++||+.+. ++.||||++|+|+|+|+++..
T Consensus 87 ~Ge~~~v~ip~~~aYG~~~~--~~~Ip~~~~l~f~vel~~v~~ 127 (129)
T 2vn1_A 87 KNEKCLVRIESMYGYGDEGC--GESIPGNSVLLFEIELLSFRE 127 (129)
T ss_dssp TTCEEEEEECGGGTTTTTCB--TTTBCTTCCEEEEEEEEEEEC
T ss_pred CCCEEEEEEChHHcCCCCCC--CCCcCCCCeEEEEEEEEEEec
Confidence 99999999999999999886 467999999999999999875
No 23
>3uf8_A Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- isomerase; ssgcid, seattle structural genomics center for in disease; HET: FK5; 1.50A {Burkholderia pseudomallei} PDB: 4ggq_C* 3vaw_A* 3uqa_A* 4g50_A* 4fn2_A* 3uqb_A* 4giv_A* 1euv_B 3v60_A 3v61_A 3v62_A*
Probab=99.90 E-value=1.6e-23 Score=183.29 Aligned_cols=112 Identities=30% Similarity=0.487 Sum_probs=105.2
Q ss_pred ceeeeCCCeEEEEEecCCCCCCCCCCEEEEEEEEEEcCCCeeeccCcCCCCcceeecCCCCchhhhHHHHHhcCCcCcEE
Q 017811 46 EVEVLHEKVTKQIIKEGHGQKPSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSSMKAGEHA 125 (365)
Q Consensus 46 ~~~~~~~gv~k~v~~~G~g~~p~~g~~v~v~y~~~~~~~g~~fd~s~~~~~p~~f~lg~~~~~i~g~e~~l~~Mk~GE~~ 125 (365)
.+.++++|++|+++++|+|..|..||.|+|||++++.+ |++||+++.++.|+.|.+|.+ ++|+||+.+|.+|++||++
T Consensus 98 t~~~~~sGl~~~vl~~G~G~~~~~gd~V~v~Y~g~l~d-G~~fdss~~~~~P~~f~lG~g-~vi~G~eeaL~gM~~Ge~~ 175 (209)
T 3uf8_A 98 TVVTTESGLKYEDLTEGSGAEARAGQTVSVHYTGWLTD-GQKFDSSKDRNDPFAFVLGGG-MVIKGWDEGVQGMKVGGVR 175 (209)
T ss_dssp CCEECTTSCEEEEEECCCSCBCCTTCEEEEEEEEEETT-SCEEEESGGGTCCEEEETTSS-SSCHHHHHHHTTCBTTCEE
T ss_pred cccCCCCceEEEEEEcCCCCcCCCCCEEEEEEEEEECC-CCEEEEccccCCCEEEEeCCC-ccchhHHHHHhCCCCCCEE
Confidence 46778899999999999999999999999999999987 999999988889999999999 8999999999999999999
Q ss_pred EEEeccccccCCCCCCCCCCCCCCCcEEEEEEEEee
Q 017811 126 LLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGF 161 (365)
Q Consensus 126 ~~~i~~~~~yg~~g~~~~~~ip~~~~l~~~iel~~~ 161 (365)
.|.|||.+|||+.|. .+.||||++|+|+|+|+++
T Consensus 176 ~v~Ipp~~aYG~~g~--~~~IP~~s~LvF~VeL~~I 209 (209)
T 3uf8_A 176 RLTIPPQLGYGARGA--AGVIPPNATLVFEVELLDV 209 (209)
T ss_dssp EEEECGGGTTTTTCB--TTTBCTTCCEEEEEEEEEC
T ss_pred EEEECcHHhCCCCCC--CCCcCCCCeEEEEEEEEEC
Confidence 999999999999987 3569999999999999874
No 24
>2d9f_A FK506-binding protein 8 variant; FKBP, rapamycin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.90 E-value=1.5e-23 Score=171.26 Aligned_cols=118 Identities=22% Similarity=0.356 Sum_probs=107.3
Q ss_pred CCCCCceeeeCCC-eEEEEEecCCCC--CCCCCCEEEEEEEEEEcCCCeeeccCcCCCCcceeecCCCCchhhhHHHHHh
Q 017811 41 PKVDSEVEVLHEK-VTKQIIKEGHGQ--KPSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVS 117 (365)
Q Consensus 41 ~~~~~~~~~~~~g-v~k~v~~~G~g~--~p~~g~~v~v~y~~~~~~~g~~fd~s~~~~~p~~f~lg~~~~~i~g~e~~l~ 117 (365)
++.+++++++++| ++|+++++|+|. .|..||.|+|||++++.+ |++||+ ..|+.|.+|.+ ++|+||+.+|.
T Consensus 5 ~~~~~~~~~~~~g~l~~~vl~~G~G~~~~~~~gd~V~v~Y~g~~~d-G~~fds----~~p~~f~lG~g-~~i~G~e~~L~ 78 (135)
T 2d9f_A 5 SSGEEWLDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLEN-GTRVQE----EPELVFTLGDC-DVIQALDLSVP 78 (135)
T ss_dssp CCCSSCEESSSSSSSEEEEEECCCSSCCCCCTTSEEEEEEEEEESS-SCEEEE----EEEEEEETTSC-CSCTTTTTTGG
T ss_pred CCcccCcEECCCCCEEEEEEEcCCCCCccCCCCCEEEEEEEEEECC-CCEEec----CCCEEEEeCCC-ChhHHHHHHHh
Confidence 3456678899888 999999999997 899999999999999977 899997 37999999999 89999999999
Q ss_pred cCCcCcEEEEEeccccccCCCC-CCCCCCCCCCCcEEEEEEEEeeecCcc
Q 017811 118 SMKAGEHALLHVGWELGYGKEG-SFSFPNVSPMADLVYEVVLIGFDETKE 166 (365)
Q Consensus 118 ~Mk~GE~~~~~i~~~~~yg~~g-~~~~~~ip~~~~l~~~iel~~~~~~~~ 166 (365)
+|++||++.|.|||.++||..+ . .+.||||++|+|+|+|+++....+
T Consensus 79 gm~~Ge~~~v~ip~~~aYG~~~~~--~~~Ip~~~~l~f~vel~~v~~~~~ 126 (135)
T 2d9f_A 79 LMDVGETAMVTADSKYCYGPQGSR--SPYIPPHAALCLEVTLKTAVDRPD 126 (135)
T ss_dssp GSCTTCEEEEEECHHHHTCTTCCS--SSCCCTTCCEEEEEEEEEEESSCS
T ss_pred CCCCCCEEEEEEChhHccCcCCcC--CCccCCCCeEEEEEEEEEeecCCc
Confidence 9999999999999999999988 4 367999999999999999987654
No 25
>1q6h_A FKBP-type peptidyl-prolyl CIS-trans isomerase FKP; chaperone, peptidyl-prolyl isomerase, heat shock protein, FK family; HET: MSE; 1.97A {Escherichia coli} SCOP: d.26.1.1 PDB: 1q6i_A* 1q6u_A
Probab=99.90 E-value=2e-23 Score=183.61 Aligned_cols=110 Identities=26% Similarity=0.519 Sum_probs=102.5
Q ss_pred ceeeeCCCeEEEEEecCCCCCCCCCCEEEEEEEEEEcCCCeeeccCcCCCCcceeecCCCCchhhhHHHHHhcCCcCcEE
Q 017811 46 EVEVLHEKVTKQIIKEGHGQKPSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSSMKAGEHA 125 (365)
Q Consensus 46 ~~~~~~~gv~k~v~~~G~g~~p~~g~~v~v~y~~~~~~~g~~fd~s~~~~~p~~f~lg~~~~~i~g~e~~l~~Mk~GE~~ 125 (365)
++.++++|++++++++|+|..|..||.|+|||++++.+ |++||+++.++.|++|.+| ++|+||+++|.+|++|+++
T Consensus 115 ~v~~~~sGl~y~vl~~G~G~~p~~gD~V~V~Y~g~l~d-G~vfdss~~~g~p~~f~lg---~vI~G~eeaL~gMk~Gek~ 190 (224)
T 1q6h_A 115 GVKTSSTGLVYQVVEAGKGEAPKDSDTVVVNYKGTLID-GKEFDNSYTRGEPLSFRLD---GVIPGWTEGLKNIKKGGKI 190 (224)
T ss_dssp TEEECTTSCEEEEEECCSSCCCCTTCEEEEEEEEEETT-SCEEEEGGGGTSCEEEEGG---GSCHHHHHHGGGSCTTCEE
T ss_pred CeEECCCceEEEEEecccCccccCCCEEEEEEEEEeCC-CCEEeeccccCCCEEEEcC---CcchhHHHHHcCCCCCCEE
Confidence 47778999999999999999999999999999999987 9999999888889999996 7899999999999999999
Q ss_pred EEEeccccccCCCCCCCCCCCCCCCcEEEEEEEEeee
Q 017811 126 LLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGFD 162 (365)
Q Consensus 126 ~~~i~~~~~yg~~g~~~~~~ip~~~~l~~~iel~~~~ 162 (365)
+|+|||.++||..+. +.||||++|+|+|+|+++.
T Consensus 191 ~v~IP~~laYG~~g~---~~IPp~stLiF~VeL~~ik 224 (224)
T 1q6h_A 191 KLVIPPELAYGKAGV---PGIPPNSTLVFDVELLDVK 224 (224)
T ss_dssp EEEECGGGTTTTTCB---TTBCTTCCEEEEEEEEEEC
T ss_pred EEEECchhhcCcCCC---CCCCCCCEEEEEEEEEEeC
Confidence 999999999999886 3599999999999999873
No 26
>1u79_A FKBP-type peptidyl-prolyl CIS-trans isomerase 3; TFKBP13, FK-506 binding protein; 1.85A {Arabidopsis thaliana} SCOP: d.26.1.1 PDB: 1y0o_A
Probab=99.90 E-value=8.5e-24 Score=171.49 Aligned_cols=115 Identities=23% Similarity=0.315 Sum_probs=104.2
Q ss_pred CceeeeCCCeEEEEEecCCCCCCCCCCEEEEEEEEEEcCCCeeeccCcCCCCcceeecCCCCchhhhHHHHHhc------
Q 017811 45 SEVEVLHEKVTKQIIKEGHGQKPSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSS------ 118 (365)
Q Consensus 45 ~~~~~~~~gv~k~v~~~G~g~~p~~g~~v~v~y~~~~~~~g~~fd~s~~~~~p~~f~lg~~~~~i~g~e~~l~~------ 118 (365)
..+.++++||+|+++++|+|..|..||.|+|||++++.+ |++||+++.+++|+.|.+|.+ ++|+||+.+|.+
T Consensus 5 ~~~~~~~~Gl~~~~l~~G~G~~~~~gd~V~v~Y~g~~~d-G~~fdss~~~~~p~~f~lG~~-~~i~G~~~~L~G~~~~~~ 82 (129)
T 1u79_A 5 CEFSVSPSGLAFCDKVVGYGPEAVKGQLIKAHYVGKLEN-GKVFDSSYNRGKPLTFRIGVG-EVIKGWDQGILGSDGIPP 82 (129)
T ss_dssp CCCEECTTSCEEEEEECCSSCBCCTTCEEEEEEEEECTT-SCEEEEHHHHTSCEEEETTSS-SSCHHHHHHHHCBTTBCC
T ss_pred CccEECCCCeEEEEEEcCCCCCCCCCCEEEEEEEEEECC-CCEEEecCCCCCCEEEEeCCC-CccHHHHHHhcccccccc
Confidence 457788999999999999999999999999999999876 999999987678999999998 899999999988
Q ss_pred CCcCcEEEEEeccccccCCCCCC---CCCCCCCCCcEEEEEEEEee
Q 017811 119 MKAGEHALLHVGWELGYGKEGSF---SFPNVSPMADLVYEVVLIGF 161 (365)
Q Consensus 119 Mk~GE~~~~~i~~~~~yg~~g~~---~~~~ip~~~~l~~~iel~~~ 161 (365)
|++||+++|.|||.++||+.+.. ..+.||||++|+|+|+|+++
T Consensus 83 m~~Ge~~~v~ip~~~aYG~~~~~~~~~~~~Ip~~~~l~f~vel~~i 128 (129)
T 1u79_A 83 MLTGGKRTLRIPPELAYGDRGAGCKGGSCLIPPASVLLFDIEYIGK 128 (129)
T ss_dssp CBTTCEEEEEECGGGTTGGGCEEEETTEEEECTTCCEEEEEEEEEE
T ss_pred cCCCCEEEEEEChHHccCCCCCCccccCCcCCCCCeEEEEEEEEEe
Confidence 99999999999999999998751 01469999999999999876
No 27
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.90 E-value=1.5e-23 Score=175.85 Aligned_cols=156 Identities=26% Similarity=0.341 Sum_probs=127.6
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhh-hhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHH
Q 017811 175 VEERIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMF-QLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAI 253 (365)
Q Consensus 175 ~~e~~~~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~-~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~ 253 (365)
.+++++.+..++..|+.+++.|+|.+|+..|.+||.+.+..... ................+|+|+|.||+++|+|++|+
T Consensus 4 ~~e~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~ 83 (162)
T 3rkv_A 4 EDDKLKSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAE 83 (162)
T ss_dssp ----CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHH
Confidence 35678899999999999999999999999999999995432110 01111222334555678999999999999999999
Q ss_pred HHHHHHHhCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcH-HHHHHHHHHHHHHHHHHHHHHHHHhcccC
Q 017811 254 GQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDK-SIARELRLLAEHEKAVYKKQKEIYKGIFG 330 (365)
Q Consensus 254 ~~~~~aL~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~-~~~~~l~~l~~~~~~~~~~~k~~y~kmf~ 330 (365)
.+|+++|.++|+++++|+++|.+|..+|+|++|+.+|++++.++|+|. .+...+..|...++++.++++++|++||+
T Consensus 84 ~~~~~al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~f~ 161 (162)
T 3rkv_A 84 ETSSEVLKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVAREMKIVTERRAEKKADSRVTYSKMFQ 161 (162)
T ss_dssp HHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHTTSSCC-------
T ss_pred HHHHHHHhcCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999999999 88999999999999999999999999996
No 28
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.86 E-value=4.8e-21 Score=154.53 Aligned_cols=114 Identities=23% Similarity=0.361 Sum_probs=109.1
Q ss_pred HHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHH
Q 017811 180 GAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLV 259 (365)
Q Consensus 180 ~~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~a 259 (365)
+.++.++++|+.+|+.|+|.+|+..|++||++.|.+.. +++|+|.||.++|+|++|+.+|+++
T Consensus 11 ~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~-----------------~~~~~~~~~~~~~~~~~A~~~~~~a 73 (126)
T 4gco_A 11 ELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAI-----------------LYSNRAACLTKLMEFQRALDDCDTC 73 (126)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH-----------------HHHHHhhHHHhhccHHHHHHHHHHH
Confidence 56889999999999999999999999999999998744 4999999999999999999999999
Q ss_pred HhCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHH
Q 017811 260 LGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLL 310 (365)
Q Consensus 260 L~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l 310 (365)
|+++|+++++|+++|.+|..+|++++|+.+|+++++++|+|..++..|+.|
T Consensus 74 l~~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~l~P~~~~a~~~l~~~ 124 (126)
T 4gco_A 74 IRLDSKFIKGYIRKAACLVAMREWSKAQRAYEDALQVDPSNEEAREGVRNC 124 (126)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHhhhhhhHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCcCCHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999988876
No 29
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=99.86 E-value=2.8e-21 Score=176.66 Aligned_cols=111 Identities=33% Similarity=0.549 Sum_probs=103.4
Q ss_pred eCCCeEEEEEecCCCCC-CCCCCEEEEEEEEEEcCCCeeeccCcCCCCcceeecCCCCchhhhHHHHHhcCCcCcEEEEE
Q 017811 50 LHEKVTKQIIKEGHGQK-PSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSSMKAGEHALLH 128 (365)
Q Consensus 50 ~~~gv~k~v~~~G~g~~-p~~g~~v~v~y~~~~~~~g~~fd~s~~~~~p~~f~lg~~~~~i~g~e~~l~~Mk~GE~~~~~ 128 (365)
.++||+|+++++|.|.. |..||.|+|||++++.+ |++||+++.++.|++|.+|.+ ++|+||+.+|.+|++||++.|+
T Consensus 49 ~~~gl~~~vl~~G~G~~~~~~gd~V~v~Y~g~~~d-G~~fdss~~~~~p~~f~lG~g-~vi~G~e~aL~gm~~Ge~~~v~ 126 (280)
T 1q1c_A 49 QDEGVLKVIKREGTGTEMPMIGDRVFVHYTGWLLD-GTKFDSSLDRKDKFSFDLGKG-EVIKAWDIAIATMKVGEVCHIT 126 (280)
T ss_dssp CSSSEEEEEEECCSSSCCCCTTCEEEEEEEEEETT-SCEEEESTTSSSCEEEETTTT-SSCHHHHHHHTTCCTTCEEEEE
T ss_pred CCCceEEEEEeCCCCCcCCCCCCEEEEEEEEEECC-CCEEEecccCCCCEEEEECCc-ChhHHHHHHHhcCCCCCEEEEE
Confidence 36799999999999995 99999999999999977 999999987778999999999 8999999999999999999999
Q ss_pred eccccccCCCCCCCCCCCCCCCcEEEEEEEEeeecC
Q 017811 129 VGWELGYGKEGSFSFPNVSPMADLVYEVVLIGFDET 164 (365)
Q Consensus 129 i~~~~~yg~~g~~~~~~ip~~~~l~~~iel~~~~~~ 164 (365)
|||.++||..|. ++.||++++|+|+|+|+++...
T Consensus 127 ipp~~aYG~~g~--~~~Ip~~~~lvf~Vel~~i~~~ 160 (280)
T 1q1c_A 127 CKPEYAYGSAGS--PPKIPPNATLVFEVELFEFKGE 160 (280)
T ss_dssp ECGGGTTTTTCB--TTTBCTTCCEEEEEEEEEEECE
T ss_pred ECcHHhCCCcCc--cCCCCCCCcEEEEEEeeeeccc
Confidence 999999999887 4789999999999999988753
No 30
>2pbc_A FK506-binding protein 2; endoplasmic reticulum, isomerase, polymorphism, rotamase, structural genomics, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.85 E-value=2.7e-21 Score=150.27 Aligned_cols=97 Identities=31% Similarity=0.486 Sum_probs=89.3
Q ss_pred CCCCCCCCEEEEEEEEEEcCCCeeeccCcCCCCcceeecCCCCchhhhHHHHHhcCCcCcEEEEEeccccccCCCCCCCC
Q 017811 64 GQKPSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSSMKAGEHALLHVGWELGYGKEGSFSF 143 (365)
Q Consensus 64 g~~p~~g~~v~v~y~~~~~~~g~~fd~s~~~~~p~~f~lg~~~~~i~g~e~~l~~Mk~GE~~~~~i~~~~~yg~~g~~~~ 143 (365)
|..|..||.|+|||++++.+ |++||+++.++.|+.|.+|.+ ++|+||+.+|.+|++||++.|.|||.++||+.+. .
T Consensus 3 g~~~~~gd~V~v~y~~~~~d-G~~~d~s~~~~~p~~f~lG~~-~~i~g~~~~l~gm~~Ge~~~v~ip~~~ayG~~~~--~ 78 (102)
T 2pbc_A 3 PIKSRKGDVLHMHYTGKLED-GTEFDSSLPQNQPFVFSLGTG-QVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGA--P 78 (102)
T ss_dssp CCCCCTTCEEEEEEEEECTT-SCEEEESTTTTCCEEEETTSS-SSCHHHHTTSTTCCTTCEEEEEECGGGTTTTTCB--T
T ss_pred CCcCCCCCEEEEEEEEEECC-CCEEEeCCCCCCCEEEEeCCC-CccHHHHHHHhCCCCCCEEEEEECHHHCcCCCCC--C
Confidence 45789999999999999866 999999987778999999998 8999999999999999999999999999999886 3
Q ss_pred CCCCCCCcEEEEEEEEeeecC
Q 017811 144 PNVSPMADLVYEVVLIGFDET 164 (365)
Q Consensus 144 ~~ip~~~~l~~~iel~~~~~~ 164 (365)
+.||||++++|+|+|+++...
T Consensus 79 ~~Ip~~~~l~f~v~l~~v~~~ 99 (102)
T 2pbc_A 79 PKIPGGATLVFEVELLKIERR 99 (102)
T ss_dssp TTBCTTCCEEEEEEEEEEGGG
T ss_pred CCcCcCCeEEEEEEEEEeccc
Confidence 679999999999999998764
No 31
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.85 E-value=4e-20 Score=160.09 Aligned_cols=176 Identities=31% Similarity=0.418 Sum_probs=135.9
Q ss_pred EEEeeecCcccccCCCCCHHHHHHHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhh
Q 017811 157 VLIGFDETKEGKARSDMTVEERIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCH 236 (365)
Q Consensus 157 el~~~~~~~~~~~~~~~~~~e~~~~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (365)
.+..+.+.. ..|.++.++....+..+...|+.++..|+|.+|+..|.+++.+.|.+..+... ........+...++
T Consensus 16 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~-~~~~~~~~~~~~~~ 91 (198)
T 2fbn_A 16 NLYFQGAKK---SIYDYTDEEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQ-ILLDKKKNIEISCN 91 (198)
T ss_dssp ------CCC---SGGGCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCH-HHHHHHHHHHHHHH
T ss_pred hhhhccccC---chhhCCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchh-hHHHHHHHHHHHHH
Confidence 344455544 49999999999999999999999999999999999999999998876532111 01112233445789
Q ss_pred hHHHHHHHHhcCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHH
Q 017811 237 LNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKA 316 (365)
Q Consensus 237 ~nla~~~~kl~~~~~A~~~~~~aL~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~~~~ 316 (365)
+|+|.||+++|+|++|+.+|++++.++|.+.++++++|.+|..+|+|++|+..|++++.++|++..+...+..+...+++
T Consensus 92 ~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~ 171 (198)
T 2fbn_A 92 LNLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCVNKLKE 171 (198)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccCCCCCcc
Q 017811 317 VYKKQKEIYKGIFGPRPEPK 336 (365)
Q Consensus 317 ~~~~~k~~y~kmf~~~~~~~ 336 (365)
..+..+..|.+||+......
T Consensus 172 ~~~~~~~~~~~~f~~~~~~~ 191 (198)
T 2fbn_A 172 ARKKDKLTFGGMFDKGPLYE 191 (198)
T ss_dssp HHC-----------------
T ss_pred HHHHHHHHHHHHhcccchhh
Confidence 99999999999998766443
No 32
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.84 E-value=1.1e-20 Score=157.22 Aligned_cols=142 Identities=18% Similarity=0.163 Sum_probs=121.0
Q ss_pred CHHHHHHHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHH
Q 017811 174 TVEERIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAI 253 (365)
Q Consensus 174 ~~~e~~~~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~ 253 (365)
.+-.....+..++..|+.+++.|+|++|+..|++||++.|.++...... .......+|+|+|.|+.++|+|++|+
T Consensus 3 ~~~~~~~~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~-----~~~~~a~a~~n~g~al~~Lgr~~eAl 77 (159)
T 2hr2_A 3 KPLKEVVGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFD-----HAGFDAFCHAGLAEALAGLRSFDEAL 77 (159)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCC-----HHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhh-----hccchHHHHHHHHHHHHHCCCHHHHH
Confidence 3334467889999999999999999999999999999999843210000 01112337999999999999999999
Q ss_pred HHHHHHHhC-------CCCCHHHH----HHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHH
Q 017811 254 GQCSLVLGE-------DENNVKAL----FRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKK 320 (365)
Q Consensus 254 ~~~~~aL~~-------~p~n~ka~----~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~~~~~~~~ 320 (365)
.+|+++|++ +|++.++| |++|.++..+|+|++|+.+|+++++++|++..+...+..+++..++..++
T Consensus 78 ~~~~kAL~l~n~~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~~~~~~~~~~~~~~~~~~~k 155 (159)
T 2hr2_A 78 HSADKALHYFNRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERKGETPGKERMMEVAIDRIAQ 155 (159)
T ss_dssp HHHHHHHHHHHHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCSCCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhccccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 999999999 99999999 99999999999999999999999999999999999999888877776554
No 33
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=99.82 E-value=4.5e-20 Score=174.96 Aligned_cols=111 Identities=29% Similarity=0.403 Sum_probs=101.2
Q ss_pred CCCeEEEEEecCCCC-CCCCCCEEEEEEEEEEcCCCeeeccCc-CCCCcceeecCCCCchhhhHHHHHhcCCcCcEEEEE
Q 017811 51 HEKVTKQIIKEGHGQ-KPSKYSTCFLHYRAWAESTRHKFDDTW-LEQQPLEMVLGKEKKEMTGLAIGVSSMKAGEHALLH 128 (365)
Q Consensus 51 ~~gv~k~v~~~G~g~-~p~~g~~v~v~y~~~~~~~g~~fd~s~-~~~~p~~f~lg~~~~~i~g~e~~l~~Mk~GE~~~~~ 128 (365)
+.+++++++++|.|. .|..||.|+|||++++.+ |++||++. .+++|+.|.+|.+ ++|+||+.+|.+|++||++.|+
T Consensus 243 d~~~~~~i~~~g~g~~~~~~gd~V~v~y~g~l~d-G~~fd~~~~~~~~p~~f~~G~g-~~i~G~e~~l~gm~~Ge~~~v~ 320 (356)
T 3jxv_A 243 DKKILKKVLKEXEGYERPNEGAVVTVKITGKLQD-GTVFLKKGHDEQEPFEFKTDEE-AVIEGLDRAVLNMKKGEVALVT 320 (356)
T ss_dssp TCCEEEEEEECCBSSCCCCTTCEEEEEEEEEESS-SCEEEEESCTTSCCCEEETTTT-SSCHHHHHHHTTCCBTCEEEEE
T ss_pred ccceeEEeeecccccCCCCCCCEEEEEEEEEECC-CCEEeeccccCCcCEEEEECCC-ccchHHHHHHhCCCCCCEEEEE
Confidence 468999999999995 899999999999999987 89999884 5678999999999 8999999999999999999999
Q ss_pred eccccccCCCCCCCCCCCCCCCcEEEEEEEEeeec
Q 017811 129 VGWELGYGKEGSFSFPNVSPMADLVYEVVLIGFDE 163 (365)
Q Consensus 129 i~~~~~yg~~g~~~~~~ip~~~~l~~~iel~~~~~ 163 (365)
|||.++||..+....+.||||++|+|+|+|+++.+
T Consensus 321 ip~~~aYG~~~~~~~~~Ip~~~~l~f~vel~~~~~ 355 (356)
T 3jxv_A 321 IPPEYAYGSTESKQDAIVPPNSTVIYEVELVSFVK 355 (356)
T ss_dssp ECGGGTTTTSCEESSSEECTTCCEEEEEEEEEEEC
T ss_pred EChHHccCCCCcCCCCcCCcCCeEEEEEEEEEEEc
Confidence 99999999887533467999999999999999864
No 34
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=99.82 E-value=5.9e-22 Score=187.91 Aligned_cols=117 Identities=29% Similarity=0.505 Sum_probs=2.1
Q ss_pred CceeeeCCCeEEEEEecCCCC-CCCCCCEEEEEEEEEEcCCCeeeccCcCCCCcceeecCCCCchhhhHHHHHhcCCcCc
Q 017811 45 SEVEVLHEKVTKQIIKEGHGQ-KPSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSSMKAGE 123 (365)
Q Consensus 45 ~~~~~~~~gv~k~v~~~G~g~-~p~~g~~v~v~y~~~~~~~g~~fd~s~~~~~p~~f~lg~~~~~i~g~e~~l~~Mk~GE 123 (365)
++..++++||+|+++++|+|. .|..||.|+|||++++.+ |++||+|+.++.|+.|.+|.+ ++|+||+.+|.+|++||
T Consensus 4 ~~~~~~~~Gl~~~i~~~G~G~~~~~~gd~V~v~Y~g~~~d-G~~fdss~~~~~p~~~~lG~g-~~i~g~e~~l~gm~~Ge 81 (356)
T 3jxv_A 4 EENEIGKQGLKKKLLKEGEGWDTPEVGDEVEVHYTGTLLD-GKKFDSSRDRDDTFKFKLGQG-QVIKGWDQGIKTMKKGE 81 (356)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccceECCCCeEEEEEEeecCCccCCCCCEEEEEEEEEECC-CCEEEEcccCCCcEEEEeCCC-ccchHHHHHHhcCCCCC
Confidence 456778899999999999995 899999999999999987 999999988889999999999 89999999999999999
Q ss_pred EEEEEeccccccCCCCCCCCCCCCCCCcEEEEEEEEeeecCc
Q 017811 124 HALLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGFDETK 165 (365)
Q Consensus 124 ~~~~~i~~~~~yg~~g~~~~~~ip~~~~l~~~iel~~~~~~~ 165 (365)
++.|+|||.++||..|. .+.||||++|+|+|+|+++....
T Consensus 82 ~~~~~ip~~~aYG~~g~--~~~Ip~~~~l~f~vel~~~~~~~ 121 (356)
T 3jxv_A 82 NALFTIPPELAYGESGS--PPTIPANATLQFDVELLSWTSVR 121 (356)
T ss_dssp --------------------------------------CCEE
T ss_pred EEEEEEChHHhCCCCCC--CCCcCCCCEEEEEeeEEeeeccc
Confidence 99999999999999987 46899999999999999986543
No 35
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.80 E-value=5.2e-19 Score=168.81 Aligned_cols=157 Identities=31% Similarity=0.427 Sum_probs=133.1
Q ss_pred CCHHHHHHHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHH
Q 017811 173 MTVEERIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEA 252 (365)
Q Consensus 173 ~~~~e~~~~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A 252 (365)
.+.++.+..+..++..|+.+++.|+|.+|+..|++|+.+.+..... ...+...........+|+|+|.||+++++|++|
T Consensus 214 ~~~~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~-~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A 292 (370)
T 1ihg_A 214 KDVDKILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAA-AEDADGAKLQPVALSCVLNIGACKLKMSDWQGA 292 (370)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHH-SCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccc-cChHHHHHHHHHHHHHHHHHHHHHHhccCHHHH
Confidence 3578899999999999999999999999999999999976653100 000111112334466899999999999999999
Q ss_pred HHHHHHHHhCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Q 017811 253 IGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEIYKGIFG 330 (365)
Q Consensus 253 ~~~~~~aL~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~~~~~~~~~k~~y~kmf~ 330 (365)
+.+|+++|+++|+++++|+++|.+|..+|+|++|+.+|++|++++|++..++..+..+...++++.++++..|++||+
T Consensus 293 ~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l~~~~~~~~~~~~a~k~~~~kmf~ 370 (370)
T 1ihg_A 293 VDSCLEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLKVKQKIKAQKDKEKAAYAKMFA 370 (370)
T ss_dssp HHHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHCCC-----
T ss_pred HHHHHHHHHhCchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999984
No 36
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=99.78 E-value=1.4e-18 Score=158.81 Aligned_cols=108 Identities=24% Similarity=0.413 Sum_probs=97.2
Q ss_pred eCCCeEEEEEecCCCC-CCCCCCEEEEEEEEEEcCCCeeeccCcCCCCcceeecCCCCc---hhhhHHHHHhcCCcCcEE
Q 017811 50 LHEKVTKQIIKEGHGQ-KPSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKK---EMTGLAIGVSSMKAGEHA 125 (365)
Q Consensus 50 ~~~gv~k~v~~~G~g~-~p~~g~~v~v~y~~~~~~~g~~fd~s~~~~~p~~f~lg~~~~---~i~g~e~~l~~Mk~GE~~ 125 (365)
.++|+.++++++|.|. .|..||.|+|||++++ + |++||+ .|+.|.+|.+ + +|+||+.+|.+|++||++
T Consensus 166 ~d~gl~~~il~~G~G~~~~~~gd~V~i~y~g~~-d-G~~fd~-----~~~~f~lG~g-~~~~~i~G~e~~l~gmk~Ge~~ 237 (280)
T 1q1c_A 166 EDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYY-K-DKLFDQ-----RELRFEIGEG-ENLDLPYGLERAIQRMEKGEHS 237 (280)
T ss_dssp CSSSEEEEEEECCSCSCCCCTTCEEEEEEEEEE-T-TEEEEE-----EEEEEETTCG-GGGTCCHHHHHHHTTCCTTCEE
T ss_pred cccceeEEeeecccccccccCCceEEEEEEEEe-C-CEEEec-----CCeEEEecCC-cccccchhHHHHHhCCCCCcEE
Confidence 3568999999999998 7999999999999998 5 899997 3899999998 6 599999999999999999
Q ss_pred EEEeccccccCCCCCCCCCCCCCCCcEEEEEEEEeeecCcc
Q 017811 126 LLHVGWELGYGKEGSFSFPNVSPMADLVYEVVLIGFDETKE 166 (365)
Q Consensus 126 ~~~i~~~~~yg~~g~~~~~~ip~~~~l~~~iel~~~~~~~~ 166 (365)
.|+|||.++||..+.. ...||||++++|+|+|+++...++
T Consensus 238 ~v~ip~~~~yG~~~~~-~~~IP~~~~l~f~V~L~~i~~~~~ 277 (280)
T 1q1c_A 238 IVYLKPSYAFGSVGKE-KFQIPPNAELKYELHLKSFEKAKE 277 (280)
T ss_dssp EEEECGGGTTTTTCBG-GGTBCTTCCEEEEEEEEEEECCCC
T ss_pred EEEEChhHcCCcCCCc-cCccCCCCeEEEEEEEEEEeCCCC
Confidence 9999999999998752 125999999999999999998765
No 37
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.77 E-value=4.1e-18 Score=137.34 Aligned_cols=115 Identities=23% Similarity=0.265 Sum_probs=102.8
Q ss_pred HHHHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHH
Q 017811 178 RIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCS 257 (365)
Q Consensus 178 ~~~~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~ 257 (365)
..+.|..+++.|+.+++.|+|++|+..|++||++.|.+.. +|+|+|.||+++|+|++|+.+|+
T Consensus 4 ~~d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~-----------------~~~nlg~~~~~~~~~~~A~~~~~ 66 (127)
T 4gcn_A 4 MTDAAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNIT-----------------FYNNKAAVYFEEKKFAECVQFCE 66 (127)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHHTTCHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH-----------------HHHhHHHHHHHhhhHHHHHHHHH
Confidence 4567889999999999999999999999999999998644 49999999999999999999999
Q ss_pred HHHhCCCCC-------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHH
Q 017811 258 LVLGEDENN-------VKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLL 310 (365)
Q Consensus 258 ~aL~~~p~n-------~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l 310 (365)
++|+++|++ .++|+++|.++..+|+|++|+..|++++.++|+ ++....|..+
T Consensus 67 ~al~~~~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~kal~~~~~-~~~~~~l~~l 125 (127)
T 4gcn_A 67 KAVEVGRETRADYKLIAKAMSRAGNAFQKQNDLSLAVQWFHRSLSEFRD-PELVKKVKEL 125 (127)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCC-HHHHHHHHHH
T ss_pred HHHHhCcccchhhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcC-HHHHHHHHHh
Confidence 999999876 469999999999999999999999999999885 5555555443
No 38
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.76 E-value=1.1e-17 Score=133.52 Aligned_cols=116 Identities=23% Similarity=0.322 Sum_probs=109.4
Q ss_pred HHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHH
Q 017811 181 AADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVL 260 (365)
Q Consensus 181 ~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL 260 (365)
.+..+...|+.+++.|+|.+|+..|.+++.+.|.+.. +++++|.||+++|+|++|+.+|++++
T Consensus 3 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~-----------------~~~~~a~~~~~~~~~~~A~~~~~~al 65 (126)
T 3upv_A 3 KAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDAR-----------------GYSNRAAALAKLMSFPEAIADCNKAI 65 (126)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChH-----------------HHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 5778999999999999999999999999999998643 49999999999999999999999999
Q ss_pred hCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC------CCcHHHHHHHHHHHHH
Q 017811 261 GEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFA------PEDKSIARELRLLAEH 313 (365)
Q Consensus 261 ~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~------P~n~~~~~~l~~l~~~ 313 (365)
+++|+++.+++++|.++..+|++++|+..|++++.++ |++..+...+..+...
T Consensus 66 ~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~p~~~~~~~~l~~~~~~ 124 (126)
T 3upv_A 66 EKDPNFVRAYIRKATAQIAVKEYASALETLDAARTKDAEVNNGSSAREIDQLYYKASQQ 124 (126)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHH
T ss_pred HhCCCcHHHHHHHHHHHHHHhCHHHHHHHHHHHHHhCcccCCchhHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999 9999999998887654
No 39
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.71 E-value=1.2e-16 Score=133.78 Aligned_cols=121 Identities=22% Similarity=0.225 Sum_probs=109.0
Q ss_pred HHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHH
Q 017811 180 GAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLV 259 (365)
Q Consensus 180 ~~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~a 259 (365)
..+..+...|..++..|+|.+|+..|.+++.+.|.+.. +++++|.||+++|+|++|+.+|+++
T Consensus 9 ~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~-----------------~~~~l~~~~~~~g~~~~A~~~~~~a 71 (164)
T 3sz7_A 9 PESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPANPI-----------------YLSNRAAAYSASGQHEKAAEDAELA 71 (164)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHH-----------------HHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCHH-----------------HHHHHHHHHHHccCHHHHHHHHHHH
Confidence 46788999999999999999999999999999998643 4999999999999999999999999
Q ss_pred HhCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHH--HHHHHHHHHHHHHHH
Q 017811 260 LGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKS--IARELRLLAEHEKAV 317 (365)
Q Consensus 260 L~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~--~~~~l~~l~~~~~~~ 317 (365)
+.++|+++.+|+++|.+|..+|++++|+..|++++.++|++.. +...+..+..++.+.
T Consensus 72 l~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~~~~ 131 (164)
T 3sz7_A 72 TVVDPKYSKAWSRLGLARFDMADYKGAKEAYEKGIEAEGNGGSDAMKRGLETTKRKIEEA 131 (164)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHHHHHH
T ss_pred HHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999877 555555555554443
No 40
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.71 E-value=2.2e-16 Score=131.41 Aligned_cols=105 Identities=15% Similarity=0.217 Sum_probs=99.8
Q ss_pred HHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHH
Q 017811 180 GAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLV 259 (365)
Q Consensus 180 ~~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~a 259 (365)
+.+..+...|..++..|+|++|+..|++++.+.|.+..+ ++++|.||..+|+|++|+.+|+++
T Consensus 34 ~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~-----------------~~~lg~~~~~~g~~~~Ai~~~~~a 96 (151)
T 3gyz_A 34 DMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDY-----------------IMGLAAIYQIKEQFQQAADLYAVA 96 (151)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH-----------------HHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH-----------------HHHHHHHHHHHccHHHHHHHHHHH
Confidence 456788999999999999999999999999999987553 999999999999999999999999
Q ss_pred HhCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcH
Q 017811 260 LGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDK 301 (365)
Q Consensus 260 L~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~ 301 (365)
+.++|+++.+|+++|.+|..+|++++|+..|++++++.|+.+
T Consensus 97 l~l~P~~~~~~~~lg~~~~~lg~~~eA~~~~~~al~l~~~~~ 138 (151)
T 3gyz_A 97 FALGKNDYTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDEK 138 (151)
T ss_dssp HHHSSSCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHH
T ss_pred HhhCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCHH
Confidence 999999999999999999999999999999999999999865
No 41
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.70 E-value=2.8e-17 Score=136.32 Aligned_cols=133 Identities=14% Similarity=0.059 Sum_probs=114.7
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHhCCCCCH
Q 017811 188 DGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGEDENNV 267 (365)
Q Consensus 188 ~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~~~p~n~ 267 (365)
.|..+..+|++++|+..|++++...|.... .++++|.+|+++|+|++|+.+++++|+++|+++
T Consensus 3 LG~~~~~~~~~e~ai~~~~~a~~~~p~~~~-----------------~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~ 65 (150)
T 4ga2_A 3 LGSMRRSKADVERYIASVQGSTPSPRQKSI-----------------KGFYFAKLYYEAKEYDLAKKYICTYINVQERDP 65 (150)
T ss_dssp ----CCCHHHHHHHHHHHHHHSCSHHHHHT-----------------THHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred hHHHHHHcChHHHHHHHHHHhcccCcccHH-----------------HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 578888999999999999999988776432 488999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCccc
Q 017811 268 KALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEIYKGIFGPRPEPKQ 337 (365)
Q Consensus 268 ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~~~~~~~~~k~~y~kmf~~~~~~~~ 337 (365)
.+|+.+|.+|..+|++++|+..|+++++++|++..+...++.+....++..++.+..+.+.+...|+...
T Consensus 66 ~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~aa~~~~~~al~l~P~~~~ 135 (150)
T 4ga2_A 66 KAHRFLGLLYELEENTDKAVECYRRSVELNPTQKDLVLKIAELLCKNDVTDGRAKYWVERAAKLFPGSPA 135 (150)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCSSSSHHHHHHHHHHHHSTTCHH
T ss_pred HHHHHHHHHHHHcCchHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhCcCCHH
Confidence 9999999999999999999999999999999999999999998887777766666666788877776554
No 42
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.68 E-value=1.7e-16 Score=131.48 Aligned_cols=116 Identities=9% Similarity=0.027 Sum_probs=105.2
Q ss_pred HHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHH
Q 017811 180 GAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLV 259 (365)
Q Consensus 180 ~~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~a 259 (365)
+....+...|..|++.|+|++|+..|+++|++.|.+.. +++++|.||.++|++++|+.+|+++
T Consensus 29 ~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~-----------------a~~~lg~~~~~~~~~~~A~~~~~~a 91 (150)
T 4ga2_A 29 QKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPK-----------------AHRFLGLLYELEENTDKAVECYRRS 91 (150)
T ss_dssp HHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH-----------------HHHHHHHHHHHcCchHHHHHHHHHH
Confidence 44556778999999999999999999999999998754 4999999999999999999999999
Q ss_pred HhCCCCCHHHHHHHHHHHHHcCCHHHHHHH-HHHHHhhCCCcHHHHHHHHHHHH
Q 017811 260 LGEDENNVKALFRRGKARAELGQTDAARED-FLKAGKFAPEDKSIARELRLLAE 312 (365)
Q Consensus 260 L~~~p~n~ka~~~~g~a~~~l~~~~~A~~~-l~~al~l~P~n~~~~~~l~~l~~ 312 (365)
++++|+++.+++++|.+|..+|++++|... +++|++++|+|+.+...+..+..
T Consensus 92 l~~~p~~~~~~~~la~~~~~~~~~~~aa~~~~~~al~l~P~~~~~~~l~~~ll~ 145 (150)
T 4ga2_A 92 VELNPTQKDLVLKIAELLCKNDVTDGRAKYWVERAAKLFPGSPAVYKLKEQLLD 145 (150)
T ss_dssp HHHCTTCHHHHHHHHHHHHHHCSSSSHHHHHHHHHHHHSTTCHHHHHHHHHHHH
T ss_pred HHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhCcCCHHHHHHHHHHHH
Confidence 999999999999999999999999887765 59999999999999887776644
No 43
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.68 E-value=6.2e-16 Score=126.50 Aligned_cols=122 Identities=20% Similarity=0.195 Sum_probs=109.4
Q ss_pred HHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHH
Q 017811 180 GAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLV 259 (365)
Q Consensus 180 ~~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~a 259 (365)
..+..+...|..++..|+|.+|+..|.+++...|.+.. +++++|.||..+|+|++|+..|+++
T Consensus 16 ~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~-----------------~~~~lg~~~~~~g~~~~A~~~~~~a 78 (142)
T 2xcb_A 16 DTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDAR-----------------YFLGLGACRQSLGLYEQALQSYSYG 78 (142)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHH-----------------HHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 34677889999999999999999999999999998754 4899999999999999999999999
Q ss_pred HhCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHH
Q 017811 260 LGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVY 318 (365)
Q Consensus 260 L~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~~~~~~ 318 (365)
+.++|+++.+++.+|.+|..+|++++|+..|++++.++|+++........+...++...
T Consensus 79 l~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~l~~l~ 137 (142)
T 2xcb_A 79 ALMDINEPRFPFHAAECHLQLGDLDGAESGFYSARALAAAQPAHEALAARAGAMLEAVT 137 (142)
T ss_dssp HHHCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCGGGHHHHHHHHHHHHHHH
T ss_pred HhcCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998877666666655555443
No 44
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.67 E-value=5.3e-16 Score=128.30 Aligned_cols=118 Identities=13% Similarity=0.108 Sum_probs=105.7
Q ss_pred HHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHH
Q 017811 180 GAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLV 259 (365)
Q Consensus 180 ~~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~a 259 (365)
..+..+...|..++..|+|.+|+..|++++...|.+.. +++++|.||..+|+|++|+..|+++
T Consensus 19 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~-----------------~~~~lg~~~~~~g~~~~A~~~~~~a 81 (148)
T 2vgx_A 19 DTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSR-----------------FFLGLGACRQAMGQYDLAIHSYSYG 81 (148)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHH-----------------HHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 45677889999999999999999999999999998754 3899999999999999999999999
Q ss_pred HhCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHH
Q 017811 260 LGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHE 314 (365)
Q Consensus 260 L~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~~ 314 (365)
+.++|+++.+++.+|.+|..+|++++|+..|+++++++|+++........+...+
T Consensus 82 l~l~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~l 136 (148)
T 2vgx_A 82 AVMDIXEPRFPFHAAECLLQXGELAEAESGLFLAQELIANXPEFXELSTRVSSML 136 (148)
T ss_dssp HHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHH
T ss_pred HhcCCCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCCCcchHHHHHHHHHH
Confidence 9999999999999999999999999999999999999998876655545444433
No 45
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.67 E-value=5.4e-16 Score=124.88 Aligned_cols=122 Identities=30% Similarity=0.346 Sum_probs=111.1
Q ss_pred HHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHH
Q 017811 181 AADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVL 260 (365)
Q Consensus 181 ~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL 260 (365)
.+..+...|..++..|+|.+|+..|.+++...|.+.. +++++|.|++.+|+|++|+.++.+++
T Consensus 8 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~-----------------~~~~l~~~~~~~~~~~~A~~~~~~al 70 (137)
T 3q49_B 8 SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAV-----------------YYTNRALCYLKMQQPEQALADCRRAL 70 (137)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHH-----------------HHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 3677899999999999999999999999999998643 49999999999999999999999999
Q ss_pred hCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-----cHHHHHHHHHHHHHHHHHHH
Q 017811 261 GEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPE-----DKSIARELRLLAEHEKAVYK 319 (365)
Q Consensus 261 ~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~-----n~~~~~~l~~l~~~~~~~~~ 319 (365)
.++|+++.+++.+|.++..+|++++|+..|++++.++|+ +..+...+..+........+
T Consensus 71 ~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~e 134 (137)
T 3q49_B 71 ELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALRIAKKKRWNSIE 134 (137)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCTTHHHHHHHHHHHHHHHHHH
T ss_pred HhCchhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHChhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999998 78888888888766555433
No 46
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.67 E-value=5e-16 Score=160.01 Aligned_cols=142 Identities=16% Similarity=0.176 Sum_probs=129.9
Q ss_pred HHHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHH
Q 017811 179 IGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSL 258 (365)
Q Consensus 179 ~~~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~ 258 (365)
.+.+..+...|+.+.+.|+|++|+..|++||++.|++.. +++|||.+|.++|++++|+.+|++
T Consensus 6 P~~a~al~nLG~~~~~~G~~~eAi~~~~kAl~l~P~~~~-----------------a~~nLg~~l~~~g~~~eA~~~~~~ 68 (723)
T 4gyw_A 6 PTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAA-----------------AHSNLASVLQQQGKLQEALMHYKE 68 (723)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHH-----------------HHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH-----------------HHHHHHHHHHHcCCHHHHHHHHHH
Confidence 356889999999999999999999999999999998644 499999999999999999999999
Q ss_pred HHhCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCcccc
Q 017811 259 VLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEIYKGIFGPRPEPKQK 338 (365)
Q Consensus 259 aL~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~~~~~~~~~k~~y~kmf~~~~~~~~~ 338 (365)
+|+++|+++.+|+++|.+|..+|++++|+..|++|++++|++..+...++.+...+++..++... |++.+...|+....
T Consensus 69 Al~l~P~~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~~g~~~eAi~~-~~~Al~l~P~~~~a 147 (723)
T 4gyw_A 69 AIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIAS-YRTALKLKPDFPDA 147 (723)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHH-HHHHHHHCSCCHHH
T ss_pred HHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHH-HHHHHHhCCCChHH
Confidence 99999999999999999999999999999999999999999999999999998888887766554 99998888866544
No 47
>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}
Probab=99.66 E-value=1.2e-16 Score=133.93 Aligned_cols=73 Identities=15% Similarity=0.248 Sum_probs=67.8
Q ss_pred CCCCCCEEEEEEEEEEcCCCeeeccCcCCCCcceeecCCCCchhhhHHHHHhcCCcCcEEEEEeccccccCCCCC
Q 017811 66 KPSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSSMKAGEHALLHVGWELGYGKEGS 140 (365)
Q Consensus 66 ~p~~g~~v~v~y~~~~~~~g~~fd~s~~~~~p~~f~lg~~~~~i~g~e~~l~~Mk~GE~~~~~i~~~~~yg~~g~ 140 (365)
.+..|+.|+|||++++.+ |++||+|+.+++|+.|.+|.+ ++|+||+.+|.+|++||++.|.|||++|||+...
T Consensus 24 ~i~~gd~V~v~Y~g~l~d-G~vfDss~~~~~P~~f~lG~g-~vipG~eeaL~gm~~Ge~~~v~Ipp~~AYG~~~~ 96 (169)
T 4dt4_A 24 SVQSNSAVLVHFTLKLDD-GTTAESTRNNGKPALFRLGDA-SLSEGLEQHLLGLKVGDKTTFSLEPDAAFGVPSP 96 (169)
T ss_dssp SCCTTCEEEEEEEEEETT-SCEEEEHHHHTSCEEEETTSS-SSCHHHHHHHTTCCTTCEEEEEECGGGTTCCCCG
T ss_pred cCCCCCEEEEEEEEEECC-CCEEEecCCCCCCEEEEECCC-CccHHHHHHHcCCCCCCEEEEEEChHHhcCCCCh
Confidence 578999999999999987 999999987778999999999 8999999999999999999999999999998643
No 48
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.66 E-value=3.5e-15 Score=130.22 Aligned_cols=147 Identities=17% Similarity=0.087 Sum_probs=113.1
Q ss_pred HHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHh
Q 017811 182 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLG 261 (365)
Q Consensus 182 a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~ 261 (365)
+..+..+|..++..|+|.+|+..|++++...|.+...-... .......+...+++++|.+|.++|++++|+..|+++|+
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 82 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTIALNIDRTEMYYWT-NVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQ 82 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHHHHHHH-HSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCChHHHHHh-hhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 56678899999999999999999999999998754320000 00000011122344599999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHH-HHHHHHHhccc
Q 017811 262 EDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVY-KKQKEIYKGIF 329 (365)
Q Consensus 262 ~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~~~~~~-~~~k~~y~kmf 329 (365)
++|+++.+++.+|.++..+|++++|+..|+++++++|++..+...++.+.....+.. +.....|.+..
T Consensus 83 ~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~ 151 (208)
T 3urz_A 83 KAPNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNYYYLTAEQEKKKLETDYKKLS 151 (208)
T ss_dssp HCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred HCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999998865544332 22334455544
No 49
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.64 E-value=4.4e-15 Score=130.59 Aligned_cols=134 Identities=16% Similarity=0.211 Sum_probs=118.7
Q ss_pred HHhhhhhhhhhhhhhHHHHHHHHHHHHHhhc-cchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHh
Q 017811 183 DRRKMDGNALFKEEKLEEAMQQYEMAIAYMG-DDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLG 261 (365)
Q Consensus 183 ~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~-~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~ 261 (365)
..+...|..++..|+|.+|+..|.+++.+.| .+.. +++++|.|+..+|+|++|+.++++++.
T Consensus 8 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~A~~~~~~al~ 70 (228)
T 4i17_A 8 NQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQDSV-----------------TAYNCGVCADNIKKYKEAADYFDIAIK 70 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCCHH-----------------HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhccCCCCcH-----------------HHHHHHHHHHHhhcHHHHHHHHHHHHH
Confidence 5688899999999999999999999999998 5432 488899999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcH-------HHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCC
Q 017811 262 EDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDK-------SIARELRLLAEHEKAVYKKQKEIYKGIFGPRPE 334 (365)
Q Consensus 262 ~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~-------~~~~~l~~l~~~~~~~~~~~k~~y~kmf~~~~~ 334 (365)
++|++..+++.+|.+|..+|++++|+..|+++++++|++. .+...++.+....+++.++ ...|.+.+...|.
T Consensus 71 ~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A-~~~~~~al~~~p~ 149 (228)
T 4i17_A 71 KNYNLANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQQAGNIEKA-EENYKHATDVTSK 149 (228)
T ss_dssp TTCSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHTTCHHHH-HHHHHHHTTSSCH
T ss_pred hCcchHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhHHHHHhccHHHH-HHHHHHHHhcCCC
Confidence 9999999999999999999999999999999999999998 5577777776666666554 4559999988776
No 50
>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein, chaperone; 1.95A {Methanocaldococcus jannaschii} SCOP: d.26.1.0 PDB: 3pra_A
Probab=99.64 E-value=4.4e-16 Score=129.31 Aligned_cols=71 Identities=23% Similarity=0.329 Sum_probs=65.1
Q ss_pred CCCCCEEEEEEEEEEcCCCeeeccCcCC-------------CCcceeecCCCCchhhhHHHHHhcCCcCcEEEEEecccc
Q 017811 67 PSKYSTCFLHYRAWAESTRHKFDDTWLE-------------QQPLEMVLGKEKKEMTGLAIGVSSMKAGEHALLHVGWEL 133 (365)
Q Consensus 67 p~~g~~v~v~y~~~~~~~g~~fd~s~~~-------------~~p~~f~lg~~~~~i~g~e~~l~~Mk~GE~~~~~i~~~~ 133 (365)
.+.||.|+|||++++ + |++||+|+.+ ..|+.|.+|.+ ++|+||+.+|.+|++||++.|.|||.+
T Consensus 2 i~~Gd~V~v~Y~g~l-d-G~vfDss~~~~a~~~g~~~~~~~~~P~~f~vG~g-~vi~G~eeaL~gm~~Ge~~~v~Ipp~~ 78 (157)
T 3pr9_A 2 VEKGKMVKISYDGYV-D-GKLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEG-QVLPGLDEAILEMDVGEEREVVLPPEK 78 (157)
T ss_dssp CCTTCEEEEEEEEEE-T-TEEEEESCHHHHHHHTCCCTTSCCSCEEEETTSS-SSCHHHHHHHHHCCTTCEEEEEECGGG
T ss_pred CCCCCEEEEEEEEEE-C-CEEEEeccccccccccccccccCCCCEEEEECCC-cHHHHHHHHHcCCCCCCEEEEEECcHH
Confidence 468999999999999 6 9999999753 37999999999 899999999999999999999999999
Q ss_pred ccCCCCC
Q 017811 134 GYGKEGS 140 (365)
Q Consensus 134 ~yg~~g~ 140 (365)
|||+.+.
T Consensus 79 aYG~~~~ 85 (157)
T 3pr9_A 79 AFGKRDP 85 (157)
T ss_dssp TTCCCCG
T ss_pred hcCCCCh
Confidence 9998764
No 51
>1hxv_A Trigger factor; FKBP fold, ppiase, chaperone; NMR {Mycoplasma genitalium} SCOP: d.26.1.1
Probab=99.63 E-value=5.9e-16 Score=121.77 Aligned_cols=86 Identities=17% Similarity=0.313 Sum_probs=73.6
Q ss_pred CCCCCCCCEEEEEEEEEEcCCCeeeccCcCCCCcceeecCCCCchhhhHHHHHhcCCcCcEEEEEeccccccCCCCCCCC
Q 017811 64 GQKPSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSSMKAGEHALLHVGWELGYGKEGSFSF 143 (365)
Q Consensus 64 g~~p~~g~~v~v~y~~~~~~~g~~fd~s~~~~~p~~f~lg~~~~~i~g~e~~l~~Mk~GE~~~~~i~~~~~yg~~g~~~~ 143 (365)
+..|..||.|+|+|++++ + |++||++. ..|+.|.+|.+ ++|+||+.+|.+|++||++.|.|++...||..+.
T Consensus 27 ~~~~~~gD~V~v~Y~g~~-d-G~~fdss~--~~p~~f~lG~g-~vi~G~ee~L~Gmk~Ge~~~v~i~fP~~Yg~~~~--- 98 (113)
T 1hxv_A 27 DKKLANGDIAIIDFTGIV-D-NKKLASAS--AQNYELTIGSN-SFIKGFETGLIAMKVNQKKTLALTFPSDYHVKEL--- 98 (113)
T ss_dssp --CCCSSEEEEEEEEEEE-T-TEECSTTC--CSEEEEEETSS-CSCTTHHHHHHTSCSSEEEEECCCCCTTSSSSGG---
T ss_pred CCCCCCCCEEEEEEEEEE-C-CEEcccCC--ccCEEEEECCC-ChhHHHHHHHCCCCCCCEEEEEEeCchhhCcCCC---
Confidence 446889999999999998 5 99999984 68999999999 8999999999999999999999963333886542
Q ss_pred CCCCCCCcEEEEEEEEee
Q 017811 144 PNVSPMADLVYEVVLIGF 161 (365)
Q Consensus 144 ~~ip~~~~l~~~iel~~~ 161 (365)
++++++|+|+|+++
T Consensus 99 ----~g~~l~F~V~l~~V 112 (113)
T 1hxv_A 99 ----QSKPVTFEVVLKAI 112 (113)
T ss_dssp ----GSCCCEEEEEECCB
T ss_pred ----CCCEEEEEEEEEEE
Confidence 57899999999876
No 52
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.62 E-value=9.7e-15 Score=113.26 Aligned_cols=114 Identities=18% Similarity=0.199 Sum_probs=106.7
Q ss_pred HHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHH
Q 017811 181 AADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVL 260 (365)
Q Consensus 181 ~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL 260 (365)
.+..+...|..++..|+|.+|+..|.+++...|.+.. +++++|.|+..+|+|++|+..+.+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~-----------------~~~~~a~~~~~~~~~~~A~~~~~~~~ 65 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHV-----------------LYSNRSAAYAKKGDYQKAYEDGCKTV 65 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHH-----------------HHHHHHHHHHhhccHHHHHHHHHHHH
Confidence 4677889999999999999999999999999987643 48999999999999999999999999
Q ss_pred hCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHH
Q 017811 261 GEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLA 311 (365)
Q Consensus 261 ~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~ 311 (365)
.++|.+..+++.+|.++..+|++++|+..|++++.++|++..+...+..+.
T Consensus 66 ~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 116 (118)
T 1elw_A 66 DLKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKEGLQNME 116 (118)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHH
T ss_pred HhCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCCCCHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999988887764
No 53
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.61 E-value=3.2e-15 Score=131.32 Aligned_cols=100 Identities=16% Similarity=0.133 Sum_probs=67.0
Q ss_pred hhhHHHHHHHHh-----------cCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHH
Q 017811 235 CHLNMAACLLKL-----------KRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSI 303 (365)
Q Consensus 235 ~~~nla~~~~kl-----------~~~~~A~~~~~~aL~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~ 303 (365)
+++++|.++..+ |++++|+..++++++++|+++.+++.+|.++..+|++++|+..|+++++++ ++..+
T Consensus 75 a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~~~~~ 153 (217)
T 2pl2_A 75 GYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPRYAPLHLQRGLVYALLGERDKAEASLKQALALE-DTPEI 153 (217)
T ss_dssp HHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CCHHH
T ss_pred HHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc-cchHH
Confidence 466777777777 777777777777777777777777777777777777777777777777777 66667
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccCCCCCcc
Q 017811 304 ARELRLLAEHEKAVYKKQKEIYKGIFGPRPEPK 336 (365)
Q Consensus 304 ~~~l~~l~~~~~~~~~~~k~~y~kmf~~~~~~~ 336 (365)
...++.+....++..+.. ..|.+.+...|+..
T Consensus 154 ~~~la~~~~~~g~~~~A~-~~~~~al~~~P~~~ 185 (217)
T 2pl2_A 154 RSALAELYLSMGRLDEAL-AQYAKALEQAPKDL 185 (217)
T ss_dssp HHHHHHHHHHHTCHHHHH-HHHHHHHHHSTTCH
T ss_pred HHHHHHHHHHcCCHHHHH-HHHHHHHHhCCCCh
Confidence 766776666666555443 33666666555443
No 54
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.61 E-value=4e-14 Score=117.11 Aligned_cols=118 Identities=24% Similarity=0.342 Sum_probs=109.8
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHH
Q 017811 176 EERIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQ 255 (365)
Q Consensus 176 ~e~~~~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~ 255 (365)
......+..+...|..++..|+|.+|+..|.+++...|.+.. +++++|.|+..+|+|++|+..
T Consensus 7 ~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~-----------------~~~~~a~~~~~~~~~~~A~~~ 69 (166)
T 1a17_A 7 DGALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAI-----------------YYGNRSLAYLRTECYGYALGD 69 (166)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHH-----------------HHHHHHHHHHHTTCHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCChH-----------------HHHHHHHHHHHcCCHHHHHHH
Confidence 456788999999999999999999999999999999887633 489999999999999999999
Q ss_pred HHHHHhCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHH
Q 017811 256 CSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLL 310 (365)
Q Consensus 256 ~~~aL~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l 310 (365)
+.+++.++|.++.+++.+|.++..+|++++|+..|++++.++|++..+...+..+
T Consensus 70 ~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~ 124 (166)
T 1a17_A 70 ATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQEC 124 (166)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred HHHHHHhCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999888666655
No 55
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.61 E-value=1e-14 Score=123.67 Aligned_cols=151 Identities=13% Similarity=0.113 Sum_probs=99.5
Q ss_pred HHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhh--------hhhHHHHH---HH------hhchhhhHHHHHHH
Q 017811 182 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQL--------FGKYRDMA---LA------VKNPCHLNMAACLL 244 (365)
Q Consensus 182 a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~--------~~~~~~~~---~~------~~~~~~~nla~~~~ 244 (365)
+..+...|+.++..|+|++|+..|++||++.|.+...-. .+...+.. .. -...++.++|.++.
T Consensus 5 ~~iy~~lG~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (184)
T 3vtx_A 5 TTIYMDIGDKKRTKGDFDGAIRAYKKVLKADPNNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEAYYILGSANF 84 (184)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHHHHHHHHHHH
Confidence 566889999999999999999999999999998654200 00110100 00 01234566666666
Q ss_pred HhcCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Q 017811 245 KLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEI 324 (365)
Q Consensus 245 kl~~~~~A~~~~~~aL~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~~~~~~~~~k~~ 324 (365)
..++++.|+..+.+++.++|.+..+++.+|.++..+|++++|+..|+++++++|++..+...++.+...+++..++. ..
T Consensus 85 ~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~~g~~~~A~-~~ 163 (184)
T 3vtx_A 85 MIDEKQAAIDALQRAIALNTVYADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEGKGLRDEAV-KY 163 (184)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHH-HH
T ss_pred HcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhhhHHHHHHHHHHHCCCHHHHH-HH
Confidence 66666666666666666677777777777777777777777777777777777777777777776666666555443 33
Q ss_pred HhcccCCCC
Q 017811 325 YKGIFGPRP 333 (365)
Q Consensus 325 y~kmf~~~~ 333 (365)
|.+.++..|
T Consensus 164 ~~~al~~~p 172 (184)
T 3vtx_A 164 FKKALEKEE 172 (184)
T ss_dssp HHHHHHTTH
T ss_pred HHHHHhCCc
Confidence 666665554
No 56
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.60 E-value=2.5e-15 Score=143.79 Aligned_cols=136 Identities=12% Similarity=0.053 Sum_probs=69.7
Q ss_pred HHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcC-HHHHHHHHHHH
Q 017811 181 AADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKR-YEEAIGQCSLV 259 (365)
Q Consensus 181 ~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~-~~~A~~~~~~a 259 (365)
.+..+...|..+.+.|+|.+|+..|++||.+.|.+.. +|+++|.++..+|+ +++|+.+|+++
T Consensus 96 ~~~a~~~lg~~~~~~g~~~~Al~~~~~al~l~P~~~~-----------------a~~~~g~~l~~~g~d~~eAl~~~~~a 158 (382)
T 2h6f_A 96 FRDVYDYFRAVLQRDERSERAFKLTRDAIELNAANYT-----------------VWHFRRVLLKSLQKDLHEEMNYITAI 158 (382)
T ss_dssp HHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHCCChHHHHHHHHHHHHhCccCHH-----------------HHHHHHHHHHHcccCHHHHHHHHHHH
Confidence 3455666666666667777777777777776666533 24444444444443 44444444444
Q ss_pred HhCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCC
Q 017811 260 LGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEIYKGIFGPRPE 334 (365)
Q Consensus 260 L~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~~~~~~~~~k~~y~kmf~~~~~ 334 (365)
|.++|++..+|+.+|.++..+|++++|+..|++++.++|+|..++..++.+...++++.+ ....|.+++...|.
T Consensus 159 l~l~P~~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~~~~g~~~e-Al~~~~~al~l~P~ 232 (382)
T 2h6f_A 159 IEEQPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDN-ELQYVDQLLKEDVR 232 (382)
T ss_dssp HHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTT-HHHHHHHHHHHCTT
T ss_pred HHHCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcCChHH-HHHHHHHHHHhCCC
Confidence 444444444444444444444444444444444444444444444444444444443332 22224444444443
No 57
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.60 E-value=2.9e-14 Score=112.53 Aligned_cols=123 Identities=28% Similarity=0.329 Sum_probs=112.1
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHH
Q 017811 176 EERIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQ 255 (365)
Q Consensus 176 ~e~~~~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~ 255 (365)
......+..+...|..++..|+|..|+..|.+++...|.+.. ++.++|.++..+|++++|+..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~-----------------~~~~~a~~~~~~~~~~~A~~~ 68 (131)
T 2vyi_A 6 EEDSAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPANAV-----------------YFCNRAAAYSKLGNYAGAVQD 68 (131)
T ss_dssp -CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHHTTCHHHHHHH
T ss_pred hcchhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCCHH-----------------HHHHHHHHHHHhhchHHHHHH
Confidence 345567889999999999999999999999999999887533 489999999999999999999
Q ss_pred HHHHHhCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHH
Q 017811 256 CSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEK 315 (365)
Q Consensus 256 ~~~aL~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~~~ 315 (365)
+.+++.++|.+..+++.+|.++..+|++++|+..|++++.++|++..+...+..+....+
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~~ 128 (131)
T 2vyi_A 69 CERAICIDPAYSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSNLKIAELKLR 128 (131)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHhcCccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999888888765543
No 58
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.59 E-value=1.5e-14 Score=127.03 Aligned_cols=139 Identities=13% Similarity=0.044 Sum_probs=110.7
Q ss_pred HHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhh--------hh-----------hhHHHHHHH---------hhc
Q 017811 182 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQ--------LF-----------GKYRDMALA---------VKN 233 (365)
Q Consensus 182 a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~--------~~-----------~~~~~~~~~---------~~~ 233 (365)
+..+...|..++..|++++|+..|++++.+.|.+...- .. +...+.... -..
T Consensus 39 ~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~ 118 (217)
T 2pl2_A 39 PEALYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPRYA 118 (217)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcccH
Confidence 45677899999999999999999999999999864321 01 111111111 113
Q ss_pred hhhhHHHHHHHHhcCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHH
Q 017811 234 PCHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEH 313 (365)
Q Consensus 234 ~~~~nla~~~~kl~~~~~A~~~~~~aL~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~ 313 (365)
.+++++|.++..+|++++|+..|+++++++ +++.+++.+|.+|..+|++++|+..|+++++++|++..+...+..+...
T Consensus 119 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~~la~~~~~ 197 (217)
T 2pl2_A 119 PLHLQRGLVYALLGERDKAEASLKQALALE-DTPEIRSALAELYLSMGRLDEALAQYAKALEQAPKDLDLRVRYASALLL 197 (217)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHhcc-cchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH
Confidence 578999999999999999999999999999 9999999999999999999999999999999999999999999988877
Q ss_pred HHHHHHHH
Q 017811 314 EKAVYKKQ 321 (365)
Q Consensus 314 ~~~~~~~~ 321 (365)
.++..+..
T Consensus 198 ~g~~~~A~ 205 (217)
T 2pl2_A 198 KGKAEEAA 205 (217)
T ss_dssp --------
T ss_pred ccCHHHHH
Confidence 77765543
No 59
>3prb_A FKBP-type peptidyl-prolyl CIS-trans isomerase; chaperone; 2.20A {Methanocaldococcus jannaschii} PDB: 3prd_A
Probab=99.59 E-value=2.8e-15 Score=131.68 Aligned_cols=71 Identities=23% Similarity=0.329 Sum_probs=64.9
Q ss_pred CCCCCEEEEEEEEEEcCCCeeeccCcCC-------------CCcceeecCCCCchhhhHHHHHhcCCcCcEEEEEecccc
Q 017811 67 PSKYSTCFLHYRAWAESTRHKFDDTWLE-------------QQPLEMVLGKEKKEMTGLAIGVSSMKAGEHALLHVGWEL 133 (365)
Q Consensus 67 p~~g~~v~v~y~~~~~~~g~~fd~s~~~-------------~~p~~f~lg~~~~~i~g~e~~l~~Mk~GE~~~~~i~~~~ 133 (365)
...||.|+|||++++ + |++||+|+.. +.|+.|.+|.| ++|+||+.+|.+|++||++.|.|||.+
T Consensus 2 i~~Gd~V~v~Y~g~l-d-G~vfDss~~~~A~e~gi~~~~~~~~P~~f~lG~g-~vIpG~eeaL~Gm~vGek~~v~Ippe~ 78 (231)
T 3prb_A 2 VEKGKMVKISYDGYV-D-GKLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEG-QVLPGLDEAILEMDVGEEREVVLPPEK 78 (231)
T ss_dssp CCTTCEEEEEEEEEE-T-TEEEEESCHHHHHHTTCCCTTSCCSCEEEETTSS-SSCHHHHHHHHTCCTTCEEEEEECGGG
T ss_pred CCCCCEEEEEEEEEE-C-CEEEEeccchhcccccccccccCCCCEEEEeCCC-cHHHHHHHHHcCCCCCCEEEEEeCcHH
Confidence 467999999999999 6 9999999753 37999999999 899999999999999999999999999
Q ss_pred ccCCCCC
Q 017811 134 GYGKEGS 140 (365)
Q Consensus 134 ~yg~~g~ 140 (365)
|||+.+.
T Consensus 79 AYGe~~~ 85 (231)
T 3prb_A 79 AFGKRDP 85 (231)
T ss_dssp TTCCCCG
T ss_pred hcCCCCh
Confidence 9998753
No 60
>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}
Probab=99.58 E-value=6.6e-15 Score=121.86 Aligned_cols=73 Identities=22% Similarity=0.346 Sum_probs=66.0
Q ss_pred CCCCCCEEEEEEEEEEcCCCeeeccCcCCCCcceeecCCCCchhhhHHHHHhcCCcCcEEEEEeccccccCCCCC
Q 017811 66 KPSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSSMKAGEHALLHVGWELGYGKEGS 140 (365)
Q Consensus 66 ~p~~g~~v~v~y~~~~~~~g~~fd~s~~~~~p~~f~lg~~~~~i~g~e~~l~~Mk~GE~~~~~i~~~~~yg~~g~ 140 (365)
.+..|+.|+|||++++..+|++||+|+. ..|+.|.+|.+ ++|+||+.+|.+|++|+++.|.|||..+||+.+.
T Consensus 6 ~i~~gd~V~v~Y~g~~~~dG~~fdss~~-~~p~~f~~G~g-~vipg~e~aL~gm~~Ge~~~v~ipp~~aYG~~~~ 78 (151)
T 2kr7_A 6 LESIKQAALIEYEVREQGSSIVLDSNIS-KEPLEFIIGTN-QIIAGLEKAVLKAQIGEWEEVVIAPEEAYGVYES 78 (151)
T ss_dssp CTTSCCEEEEEEEEEESSCSCEEEESTT-TCCEEEETTCC-CSCHHHHHHHTTCCBTCEEEEEECGGGTTCSSCS
T ss_pred CCCCCCEEEEEEEEEECCCCCEEEeCCC-CcCEEEEECCC-CccHHHHHHHcCCCCCCEEEEEEecHHHcCCCCc
Confidence 4678999999999998723999999965 47999999999 8999999999999999999999999999998754
No 61
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.58 E-value=2.6e-14 Score=115.96 Aligned_cols=117 Identities=31% Similarity=0.465 Sum_probs=106.6
Q ss_pred HHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHH
Q 017811 181 AADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVL 260 (365)
Q Consensus 181 ~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL 260 (365)
.+..+...|..++..|+|.+|+..|++++...|.+.. ...+++++|.||..+++|++|+.+|++++
T Consensus 27 ~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~--------------~~~~~~~~a~~~~~~~~~~~A~~~~~~~~ 92 (148)
T 2dba_A 27 SVEQLRKEGNELFKCGDYGGALAAYTQALGLDATPQD--------------QAVLHRNRAACHLKLEDYDKAETEASKAI 92 (148)
T ss_dssp CHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCHHH--------------HHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccchH--------------HHHHHHHHHHHHHHHccHHHHHHHHHHHH
Confidence 3577889999999999999999999999999886411 23469999999999999999999999999
Q ss_pred hCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHH
Q 017811 261 GEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLA 311 (365)
Q Consensus 261 ~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~ 311 (365)
.++|.+..+++.+|.++..+|++++|+..|++++.++|++..+...+..+.
T Consensus 93 ~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 143 (148)
T 2dba_A 93 EKDGGDVKALYRRSQALEKLGRLDQAVLDLQRCVSLEPKNKVFQEALRNIS 143 (148)
T ss_dssp HHTSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred hhCccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999988887664
No 62
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.58 E-value=9.2e-15 Score=116.52 Aligned_cols=102 Identities=12% Similarity=0.002 Sum_probs=90.4
Q ss_pred HhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHhCC
Q 017811 184 RRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGED 263 (365)
Q Consensus 184 ~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~~~ 263 (365)
.+...|..++..|++.+|+..|++++...|.+.. +++++|.|+..+|++++|+..++++++++
T Consensus 19 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~-----------------a~~~lg~~~~~~g~~~~A~~~~~~al~l~ 81 (121)
T 1hxi_A 19 NPMEEGLSMLKLANLAEAALAFEAVCQKEPEREE-----------------AWRSLGLTQAENEKDGLAIIALNHARMLD 81 (121)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHH-----------------HHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHH-----------------HHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 3577899999999999999999999999998754 49999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHH
Q 017811 264 ENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKS 302 (365)
Q Consensus 264 p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~ 302 (365)
|++..+++.+|.+|..+|++++|+..|+++++++|++..
T Consensus 82 P~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~P~~~~ 120 (121)
T 1hxi_A 82 PKDIAVHAALAVSHTNEHNANAALASLRAWLLSQPQYEQ 120 (121)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-------
T ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCCC
Confidence 999999999999999999999999999999999998753
No 63
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.57 E-value=2e-14 Score=114.27 Aligned_cols=116 Identities=23% Similarity=0.233 Sum_probs=107.6
Q ss_pred HHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHH
Q 017811 181 AADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVL 260 (365)
Q Consensus 181 ~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL 260 (365)
.+..+...|..++..|+|.+|+..|.+++...|.+.. +++++|.++..++++++|+.++++++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~-----------------~~~~la~~~~~~~~~~~A~~~~~~a~ 77 (133)
T 2lni_A 15 LALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAK-----------------LYSNRAACYTKLLEFQLALKDCEECI 77 (133)
T ss_dssp HHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTCHH-----------------HHHHHHHHHTTTTCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHH-----------------HHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 4677889999999999999999999999999887633 48999999999999999999999999
Q ss_pred hCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHH
Q 017811 261 GEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEH 313 (365)
Q Consensus 261 ~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~ 313 (365)
.++|.+..+++.+|.++..+|++++|+..|++++.++|++..+...+..+...
T Consensus 78 ~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~ 130 (133)
T 2lni_A 78 QLEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSCKEAADGYQRCMMA 130 (133)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGTHHHHHHHHHHHH
T ss_pred HhCCCchHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999888888877543
No 64
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.57 E-value=3.8e-14 Score=112.69 Aligned_cols=117 Identities=10% Similarity=0.085 Sum_probs=104.6
Q ss_pred HHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHhC
Q 017811 183 DRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGE 262 (365)
Q Consensus 183 ~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~~ 262 (365)
..+...|..++..|+|.+|+..|.+++...|.+... ..+++++|.|++.+|+|++|+..+.+++..
T Consensus 3 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~~--------------~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~ 68 (129)
T 2xev_A 3 RTAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYT--------------PNALYWLGESYYATRNFQLAEAQFRDLVSR 68 (129)
T ss_dssp CCHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSSTTH--------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCccc--------------HHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 346778999999999999999999999999876421 235899999999999999999999999999
Q ss_pred CCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHH
Q 017811 263 DENN---VKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEH 313 (365)
Q Consensus 263 ~p~n---~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~ 313 (365)
+|++ +.+++.+|.++..+|++++|+..|++++...|++..+...+..+...
T Consensus 69 ~p~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~l~~l 122 (129)
T 2xev_A 69 YPTHDKAAGGLLKLGLSQYGEGKNTEAQQTLQQVATQYPGSDAARVAQERLQSI 122 (129)
T ss_dssp CTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHHHH
T ss_pred CCCCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCChHHHHHHHHHHHH
Confidence 9999 89999999999999999999999999999999998887777666543
No 65
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.57 E-value=1.1e-14 Score=139.23 Aligned_cols=140 Identities=12% Similarity=0.043 Sum_probs=117.9
Q ss_pred HHHHhhhhhhhhhhhhh-HHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHH
Q 017811 181 AADRRKMDGNALFKEEK-LEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLV 259 (365)
Q Consensus 181 ~a~~~k~~G~~~~~~~~-y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~a 259 (365)
.+..+..+|..+...|+ |.+|+..|++||.+.|.+.. +|+++|.++..+|+|++|+.+|+++
T Consensus 130 ~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~-----------------a~~~~g~~~~~~g~~~eAl~~~~ka 192 (382)
T 2h6f_A 130 NYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQ-----------------VWHHRRVLVEWLRDPSQELEFIADI 192 (382)
T ss_dssp CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHHHTCCTTHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHH-----------------HHHHHHHHHHHccCHHHHHHHHHHH
Confidence 35567889999999997 99999999999999998754 4999999999999999999999999
Q ss_pred HhCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHH-HH----HHHHHHhcccCCCCC
Q 017811 260 LGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAV-YK----KQKEIYKGIFGPRPE 334 (365)
Q Consensus 260 L~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~~~~~-~~----~~k~~y~kmf~~~~~ 334 (365)
|+++|+|..+|+.+|.++..+|++++|+.+|+++++++|+|..++..++.+...+... .+ .+...|.+.+...|+
T Consensus 193 l~ldP~~~~a~~~lg~~~~~~g~~~eAl~~~~~al~l~P~~~~a~~~lg~~l~~l~~~~~eA~~~~el~~~~~Al~l~P~ 272 (382)
T 2h6f_A 193 LNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQRYFVISNTTGYNDRAVLEREVQYTLEMIKLVPH 272 (382)
T ss_dssp HHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCSCSHHHHHHHHHHHHHHHHHSTT
T ss_pred HHhCccCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHCCC
Confidence 9999999999999999999999999999999999999999999999998887663222 22 224667777776665
Q ss_pred ccc
Q 017811 335 PKQ 337 (365)
Q Consensus 335 ~~~ 337 (365)
...
T Consensus 273 ~~~ 275 (382)
T 2h6f_A 273 NES 275 (382)
T ss_dssp CHH
T ss_pred CHH
Confidence 543
No 66
>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli}
Probab=99.56 E-value=1.3e-14 Score=124.66 Aligned_cols=71 Identities=21% Similarity=0.319 Sum_probs=65.2
Q ss_pred CCCCCEEEEEEEEEEcCCCeeeccCcCCCCcceeecCCCCchhhhHHHHHhcCCcCcEEEEEeccccccCCCCC
Q 017811 67 PSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSSMKAGEHALLHVGWELGYGKEGS 140 (365)
Q Consensus 67 p~~g~~v~v~y~~~~~~~g~~fd~s~~~~~p~~f~lg~~~~~i~g~e~~l~~Mk~GE~~~~~i~~~~~yg~~g~ 140 (365)
+..|+.|+|+|++++.+ |++||+|+. .+|++|.+|.+ ++|+||+.+|.+|++|+++.|+|||..+||+.+.
T Consensus 3 i~~gd~V~v~Y~g~~~d-G~~fdss~~-~~P~~f~lG~g-~vipG~eeaL~Gm~vGe~~~v~Ippe~aYGe~~~ 73 (196)
T 2kfw_A 3 VAKDLVVSLAYQVRTED-GVLVDESPV-SAPLDYLHGHG-SLISGLETALEGHEVGDKFDVAVGANDAYGQYDE 73 (196)
T ss_dssp CCSSCEEEEEEEEEETT-TEEEEECCT-TSCCEEESSSS-SSCHHHHHHHSSSCTTCEEEEECSTTTTSSCCCT
T ss_pred CCCCCEEEEEEEEEECC-CCEEEecCC-CCCEEEEECCC-CcchHHHHHHcCCCCCCEEEEEeCcHHhcCCCCh
Confidence 56899999999999866 999999965 37999999999 8999999999999999999999999999998754
No 67
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.56 E-value=4.9e-14 Score=111.35 Aligned_cols=119 Identities=18% Similarity=0.180 Sum_probs=107.8
Q ss_pred HHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHH
Q 017811 180 GAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLV 259 (365)
Q Consensus 180 ~~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~a 259 (365)
+.+..+...|..++..|+|.+|+..|.+++...|.+.. +++++|.+|..+|+|++|+.++.++
T Consensus 2 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~-----------------~~~~la~~~~~~~~~~~A~~~~~~~ 64 (131)
T 1elr_A 2 KQALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMT-----------------YITNQAAVYFEKGDYNKCRELCEKA 64 (131)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHH-----------------HHHHHHHHHHHhccHHHHHHHHHHH
Confidence 35677899999999999999999999999999887533 4899999999999999999999999
Q ss_pred HhCCCCC-------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHH
Q 017811 260 LGEDENN-------VKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKA 316 (365)
Q Consensus 260 L~~~p~n-------~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~~~~ 316 (365)
+.++|.+ ..+++++|.++..+|++++|+..|++++.+.| +..+...+..+...+++
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~ 127 (131)
T 1elr_A 65 IEVGRENREDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHR-TPDVLKKCQQAEKILKE 127 (131)
T ss_dssp HHHHHHSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHH
T ss_pred HhhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHHHH
Confidence 9999887 99999999999999999999999999999999 68888888887666554
No 68
>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}
Probab=99.56 E-value=1.3e-14 Score=122.17 Aligned_cols=71 Identities=21% Similarity=0.319 Sum_probs=65.0
Q ss_pred CCCCCEEEEEEEEEEcCCCeeeccCcCCCCcceeecCCCCchhhhHHHHHhcCCcCcEEEEEeccccccCCCCC
Q 017811 67 PSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSSMKAGEHALLHVGWELGYGKEGS 140 (365)
Q Consensus 67 p~~g~~v~v~y~~~~~~~g~~fd~s~~~~~p~~f~lg~~~~~i~g~e~~l~~Mk~GE~~~~~i~~~~~yg~~g~ 140 (365)
+..|+.|+|+|++++.+ |++||+|+. .+|+.|.+|.+ ++|+||+.+|.+|++||++.|.|||..+||+.+.
T Consensus 3 i~~gd~V~v~Y~g~~~d-G~~fdss~~-~~P~~f~lG~g-~vipG~eeaL~Gm~~Ge~~~v~ippe~aYG~~~~ 73 (171)
T 2k8i_A 3 VAKDLVVSLAYQVRTED-GVLVDESPV-SAPLDYLHGHG-SLISGLETALEGHEVGDKFDVAVGANDAYGQYDE 73 (171)
T ss_dssp CCTTEEEEEEEEEEETT-SCEEEECCS-SSCEEEETTSC-SSCSHHHHHHTTCCTTCEEEEEEETTTSSCCCCT
T ss_pred CCCCCEEEEEEEEEECC-CCEEeeccC-CcCEEEEECCC-CcchHHHHHHcCCCCCCEEEEEECcHHhcCCCCh
Confidence 56899999999999876 999999865 37999999999 8999999999999999999999999999998743
No 69
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.55 E-value=2e-14 Score=148.19 Aligned_cols=123 Identities=16% Similarity=0.074 Sum_probs=113.5
Q ss_pred HHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHh
Q 017811 182 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLG 261 (365)
Q Consensus 182 a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~ 261 (365)
+..+...|+.+.+.|+|++|+..|++||++.|++.. +|+|||.+|..+|++++|+.+|+++|+
T Consensus 43 ~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~-----------------a~~nLg~~l~~~g~~~~A~~~~~kAl~ 105 (723)
T 4gyw_A 43 AAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFAD-----------------AYSNMGNTLKEMQDVQGALQCYTRAIQ 105 (723)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH-----------------HHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 556788999999999999999999999999998644 499999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHH
Q 017811 262 EDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQ 321 (365)
Q Consensus 262 ~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~~~~~~~~~ 321 (365)
++|++..+|+++|.+|..+|++++|+..|++|++++|++..+...+..+...+.++.+..
T Consensus 106 l~P~~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P~~~~a~~~L~~~l~~~g~~~~A~ 165 (723)
T 4gyw_A 106 INPAFADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYD 165 (723)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCTTHH
T ss_pred hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHhhhhhHHHhcccHHHHH
Confidence 999999999999999999999999999999999999999999999999887666554443
No 70
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.55 E-value=3.9e-14 Score=117.46 Aligned_cols=108 Identities=20% Similarity=0.174 Sum_probs=96.4
Q ss_pred hhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCH----------HHHHHHHHHHH
Q 017811 191 ALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRY----------EEAIGQCSLVL 260 (365)
Q Consensus 191 ~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~----------~~A~~~~~~aL 260 (365)
..-+.+.|++|+..|++++++.|.+.. +++|+|.|+..++++ ++|+..|++||
T Consensus 11 ~~~r~~~feeA~~~~~~Ai~l~P~~ae-----------------a~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL 73 (158)
T 1zu2_A 11 EFDRILLFEQIRQDAENTYKSNPLDAD-----------------NLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEAL 73 (158)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhHHHHHHHHHHHHHHHCCCCHH-----------------HHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHH
Confidence 344678899999999999999999754 499999999999875 59999999999
Q ss_pred hCCCCCHHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHH
Q 017811 261 GEDENNVKALFRRGKARAELG-----------QTDAAREDFLKAGKFAPEDKSIARELRLLAEHEK 315 (365)
Q Consensus 261 ~~~p~n~ka~~~~g~a~~~l~-----------~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~~~ 315 (365)
+++|++..+||++|.+|..+| +|++|+.+|++|++++|++...+..+..+.+...
T Consensus 74 ~ldP~~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~~y~~al~~~~ka~e 139 (158)
T 1zu2_A 74 LIDPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLKSLEMTAKAPQ 139 (158)
T ss_dssp HHCTTCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHTHHH
T ss_pred HhCcCcHHHHHHHHHHHHHhcccCcchhhhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhCHh
Confidence 999999999999999999985 8999999999999999999988888887655443
No 71
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.54 E-value=4.4e-14 Score=139.14 Aligned_cols=130 Identities=23% Similarity=0.299 Sum_probs=112.8
Q ss_pred HHHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHH
Q 017811 179 IGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSL 258 (365)
Q Consensus 179 ~~~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~ 258 (365)
.+.+..+...|+.+++.|+|++|+..|++|+++.|.+.. +++|+|.||.++|+|++|+.++++
T Consensus 3 ~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~~~p~~~~-----------------~~~~lg~~~~~~g~~~~A~~~~~~ 65 (477)
T 1wao_1 3 LKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAI-----------------YYGNRSLAYLRTECYGYALGDATR 65 (477)
T ss_dssp HHHHTTSSSSSSSTTTTTCHHHHHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHH-----------------HHHHHHHHHHHhcCHHHHHHHHHH
Confidence 356788999999999999999999999999999988643 499999999999999999999999
Q ss_pred HHhCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHH--HHHHHHHHHHHHHHHh
Q 017811 259 VLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLL--AEHEKAVYKKQKEIYK 326 (365)
Q Consensus 259 aL~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l--~~~~~~~~~~~k~~y~ 326 (365)
+++++|+++.+++++|.+|..+|++++|+..|+++++++|++..+...+..+ ...++++.++. ..|.
T Consensus 66 al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~l~~~~~~~~~g~~~~A~-~~~~ 134 (477)
T 1wao_1 66 AIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFERAI-AGDE 134 (477)
T ss_dssp HHHSCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCTTHHHHHHHHHHHHHHHHHCCC------
T ss_pred HHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHh-cccc
Confidence 9999999999999999999999999999999999999999999999888887 33444444333 3455
No 72
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.53 E-value=8.8e-14 Score=127.28 Aligned_cols=102 Identities=32% Similarity=0.370 Sum_probs=97.0
Q ss_pred HHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHh
Q 017811 182 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLG 261 (365)
Q Consensus 182 a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~ 261 (365)
+..+...|+.++..|+|.+|+..|.+|+...|.+.. +++|+|.||.++|+|++|+.+++++++
T Consensus 4 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~-----------------~~~~la~~~~~~~~~~~A~~~~~~al~ 66 (281)
T 2c2l_A 4 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAV-----------------YYTNRALCYLKMQQPEQALADCRRALE 66 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHH-----------------HHHHHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccHH-----------------HHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 567889999999999999999999999999998644 499999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCc
Q 017811 262 EDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPED 300 (365)
Q Consensus 262 ~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n 300 (365)
++|+++++++++|.+|..+|++++|+..|++++.++|++
T Consensus 67 ~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~ 105 (281)
T 2c2l_A 67 LDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQ 105 (281)
T ss_dssp SCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccc
Confidence 999999999999999999999999999999999999976
No 73
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.53 E-value=1.5e-13 Score=120.59 Aligned_cols=118 Identities=16% Similarity=0.121 Sum_probs=107.6
Q ss_pred HHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHhC
Q 017811 183 DRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGE 262 (365)
Q Consensus 183 ~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~~ 262 (365)
..+...|..++..|+|.+|+..|.+++...|.+.. ++.++|.+|..+|++++|+..+++++++
T Consensus 43 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~-----------------~~~~l~~~~~~~~~~~~A~~~~~~al~~ 105 (228)
T 4i17_A 43 VTAYNCGVCADNIKKYKEAADYFDIAIKKNYNLAN-----------------AYIGKSAAYRDMKNNQEYIATLTEGIKA 105 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSHHH-----------------HHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcchHH-----------------HHHHHHHHHHHcccHHHHHHHHHHHHHH
Confidence 34556899999999999999999999999988533 4999999999999999999999999999
Q ss_pred CCCCH-------HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC--cHHHHHHHHHHHHHHHHH
Q 017811 263 DENNV-------KALFRRGKARAELGQTDAAREDFLKAGKFAPE--DKSIARELRLLAEHEKAV 317 (365)
Q Consensus 263 ~p~n~-------ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~--n~~~~~~l~~l~~~~~~~ 317 (365)
+|++. .+|+.+|.++..+|++++|+..|+++++++|+ +..+...++.+....+..
T Consensus 106 ~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~~~~ 169 (228)
T 4i17_A 106 VPGNATIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDVTSKKWKTDALYSLGVLFYNNGAD 169 (228)
T ss_dssp STTCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHHHHHHH
Confidence 99999 77999999999999999999999999999999 999999998887665554
No 74
>1ix5_A FKBP; ppiase, isomerase; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.26.1.1
Probab=99.52 E-value=9.2e-15 Score=121.02 Aligned_cols=73 Identities=26% Similarity=0.384 Sum_probs=66.1
Q ss_pred CCCCCEEEEEEEEEEcCCCeeeccCcC-------------CCCcceeecCCCCchhhhHHHHHhcCCcCcEEEEEecccc
Q 017811 67 PSKYSTCFLHYRAWAESTRHKFDDTWL-------------EQQPLEMVLGKEKKEMTGLAIGVSSMKAGEHALLHVGWEL 133 (365)
Q Consensus 67 p~~g~~v~v~y~~~~~~~g~~fd~s~~-------------~~~p~~f~lg~~~~~i~g~e~~l~~Mk~GE~~~~~i~~~~ 133 (365)
+..||.|+|||++++.+ |++||+|+. ...|+.|.+|.+ ++|+||+.+|.+|++||++.|.|||+.
T Consensus 2 i~~gd~V~v~Y~g~~~d-G~~fdss~~~~a~~~g~~~~~~~~~P~~f~~G~g-~vi~G~eeaL~gm~~Ge~~~v~ipp~~ 79 (151)
T 1ix5_A 2 VDKGVKIKVDYIGKLES-GDVFDTSIEEVAKEAGIYAPDREYEPLEFVVGEG-QLIQGFEEAVLDMEVGDEKTVKIPAEK 79 (151)
T ss_dssp CCTTCEEEECCEECCTT-SCCCEESCHHHHHHHTCCCSSCCCCCEEEETTTT-CSCHHHHHHHHTCCTTCCCEEEECTTT
T ss_pred CCCCCEEEEEEEEEECC-CCEEEecchhhcccccccccccCCCCEEEEECCC-ChhHHHHHHHcCCCCCCEEEEEECcHH
Confidence 57899999999999866 999999963 246999999999 899999999999999999999999999
Q ss_pred ccCCCCCC
Q 017811 134 GYGKEGSF 141 (365)
Q Consensus 134 ~yg~~g~~ 141 (365)
|||+.+..
T Consensus 80 aYG~~~~~ 87 (151)
T 1ix5_A 80 AYGNRNEM 87 (151)
T ss_dssp SSCSCCST
T ss_pred HCCCCCcc
Confidence 99987653
No 75
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.51 E-value=1.9e-14 Score=119.55 Aligned_cols=120 Identities=15% Similarity=-0.039 Sum_probs=104.7
Q ss_pred HHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Q 017811 199 EEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARA 278 (365)
Q Consensus 199 ~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~~~p~n~ka~~~~g~a~~ 278 (365)
-.+-..|++++.+.|.+.. +++++|.+++++|+|++|+..|++++.++|.++.+|+.+|.+|.
T Consensus 19 ~~~~~~l~~al~l~p~~~~-----------------~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~ 81 (151)
T 3gyz_A 19 INSGATLKDINAIPDDMMD-----------------DIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQ 81 (151)
T ss_dssp HHTSCCTGGGCCSCHHHHH-----------------HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHCCCCHHHHhCCCHHHHH-----------------HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 3344556677777776533 49999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCcc
Q 017811 279 ELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEIYKGIFGPRPEPK 336 (365)
Q Consensus 279 ~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~~~~~~~~~k~~y~kmf~~~~~~~ 336 (365)
.+|+|++|+..|++++.++|+++.+...++.+...+++..++... |.+.+...++..
T Consensus 82 ~~g~~~~Ai~~~~~al~l~P~~~~~~~~lg~~~~~lg~~~eA~~~-~~~al~l~~~~~ 138 (151)
T 3gyz_A 82 IKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQLRLKAPLKAKEC-FELVIQHSNDEK 138 (151)
T ss_dssp HTTCHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHTTCHHHHHHH-HHHHHHHCCCHH
T ss_pred HHccHHHHHHHHHHHHhhCCCCcHHHHHHHHHHHHcCCHHHHHHH-HHHHHHhCCCHH
Confidence 999999999999999999999999999999999988888766655 888887776554
No 76
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.50 E-value=2.9e-13 Score=114.66 Aligned_cols=121 Identities=12% Similarity=0.051 Sum_probs=95.8
Q ss_pred HHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhh--------hhHHH---HH---H---HhhchhhhHHHHHHH
Q 017811 182 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLF--------GKYRD---MA---L---AVKNPCHLNMAACLL 244 (365)
Q Consensus 182 a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~--------~~~~~---~~---~---~~~~~~~~nla~~~~ 244 (365)
+..+...|..++..|++++|+..+.+++...|.+...-.. ..... .. . .....++.++|.+|.
T Consensus 39 ~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~ 118 (184)
T 3vtx_A 39 VETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEAYYILGSANFMIDEKQAAIDALQRAIALNTVYADAYYKLGLVYD 118 (184)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHH
Confidence 4556778888888888888888888888887765432110 00000 00 0 111346899999999
Q ss_pred HhcCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHH
Q 017811 245 KLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKS 302 (365)
Q Consensus 245 kl~~~~~A~~~~~~aL~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~ 302 (365)
++|+|++|+..|+++++++|.++.+++++|.+|..+|++++|+..|++|++++|++..
T Consensus 119 ~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~a~ 176 (184)
T 3vtx_A 119 SMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEGKGLRDEAVKYFKKALEKEEKKAK 176 (184)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTHHHHH
T ss_pred HhCCchhHHHHHHHHHHhcchhhhHHHHHHHHHHHCCCHHHHHHHHHHHHhCCccCHH
Confidence 9999999999999999999999999999999999999999999999999999998643
No 77
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.50 E-value=5e-14 Score=113.08 Aligned_cols=104 Identities=13% Similarity=0.055 Sum_probs=95.9
Q ss_pred hhhhHHHHHHHHhcCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHH
Q 017811 234 PCHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEH 313 (365)
Q Consensus 234 ~~~~nla~~~~kl~~~~~A~~~~~~aL~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~ 313 (365)
..+.|+|.+|++.|+|++|+..|+++|+++|.++.+|+.+|.+|..+|++++|+.+|+++++++|++..+...++.+...
T Consensus 14 ~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~ 93 (126)
T 4gco_A 14 QEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGYIRKAACLVA 93 (126)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHH
Confidence 35889999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHHhcccCCCCCcccc
Q 017811 314 EKAVYKKQKEIYKGIFGPRPEPKQK 338 (365)
Q Consensus 314 ~~~~~~~~k~~y~kmf~~~~~~~~~ 338 (365)
++++.++.. .|.+.+...|++...
T Consensus 94 ~~~~~~A~~-~~~~al~l~P~~~~a 117 (126)
T 4gco_A 94 MREWSKAQR-AYEDALQVDPSNEEA 117 (126)
T ss_dssp TTCHHHHHH-HHHHHHHHCTTCHHH
T ss_pred CCCHHHHHH-HHHHHHHHCcCCHHH
Confidence 888776654 599999888876654
No 78
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.49 E-value=9.9e-13 Score=102.64 Aligned_cols=114 Identities=26% Similarity=0.336 Sum_probs=105.5
Q ss_pred HHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHh
Q 017811 182 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLG 261 (365)
Q Consensus 182 a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~ 261 (365)
+..+...|..++..|+|.+|+..|.+++...|.+.. +++++|.++...|++++|+..+.+++.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~-----------------~~~~la~~~~~~~~~~~A~~~~~~~~~ 71 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAE-----------------AWYNLGNAYYKQGDYDEAIEYYQKALE 71 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHH-----------------HHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 567788999999999999999999999999886532 488999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHH
Q 017811 262 EDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAE 312 (365)
Q Consensus 262 ~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~ 312 (365)
.+|.+..+++.+|.++..+|++++|+..|++++.++|++..+...+..+..
T Consensus 72 ~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 122 (125)
T 1na0_A 72 LDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQ 122 (125)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred hCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999888887654
No 79
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.49 E-value=5.4e-14 Score=110.87 Aligned_cols=98 Identities=20% Similarity=0.130 Sum_probs=84.8
Q ss_pred hhhhHHHHHHHHHHHHHh---hccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHhCCCCCHHHH
Q 017811 194 KEEKLEEAMQQYEMAIAY---MGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKAL 270 (365)
Q Consensus 194 ~~~~y~~A~~~y~~al~~---~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~~~p~n~ka~ 270 (365)
..|+|++|+..|++++.+ .|.+ ..+++++|.||..+|+|++|+..++++++++|+++.++
T Consensus 2 ~~g~~~~A~~~~~~al~~~~~~p~~-----------------~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 64 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGLQGKDL-----------------AECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALR 64 (117)
T ss_dssp -----CCCHHHHHHHHSSCCCHHHH-----------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCCCccH-----------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHH
Confidence 368899999999999998 3443 33599999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHH
Q 017811 271 FRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELR 308 (365)
Q Consensus 271 ~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~ 308 (365)
+++|.++..+|++++|+..|++++.+.|+++.+.....
T Consensus 65 ~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~ 102 (117)
T 3k9i_A 65 VFYAMVLYNLGRYEQGVELLLKIIAETSDDETIQSYKQ 102 (117)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHTHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHH
Confidence 99999999999999999999999999999987764433
No 80
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.49 E-value=4.7e-13 Score=115.83 Aligned_cols=137 Identities=15% Similarity=0.125 Sum_probs=115.2
Q ss_pred HHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHH
Q 017811 180 GAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLV 259 (365)
Q Consensus 180 ~~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~a 259 (365)
..+..+...|..++..|+|.+|+..|.+++ .+ + ..+++++|.+|..+|+|++|+.+|.++
T Consensus 4 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~--~~-~-----------------~~~~~~lg~~~~~~g~~~~A~~~~~~a 63 (213)
T 1hh8_A 4 VEAISLWNEGVLAADKKDWKGALDAFSAVQ--DP-H-----------------SRICFNIGCMYTILKNMTEAEKAFTRS 63 (213)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHTSS--SC-C-----------------HHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHc--CC-C-----------------hHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 345667889999999999999999999985 22 2 225899999999999999999999999
Q ss_pred HhCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcH----------------HHHHHHHHHHHHHHHHHHHHHH
Q 017811 260 LGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDK----------------SIARELRLLAEHEKAVYKKQKE 323 (365)
Q Consensus 260 L~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~----------------~~~~~l~~l~~~~~~~~~~~k~ 323 (365)
+.++|.++.+++.+|.+|..+|++++|+..|++++.+.|++. .+...++.+....++..++ ..
T Consensus 64 l~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A-~~ 142 (213)
T 1hh8_A 64 INRDKHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKA-EE 142 (213)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHH-HH
T ss_pred HHhCccchHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHH-HH
Confidence 999999999999999999999999999999999999888776 8888888888777776655 44
Q ss_pred HHhcccCCCCCccc
Q 017811 324 IYKGIFGPRPEPKQ 337 (365)
Q Consensus 324 ~y~kmf~~~~~~~~ 337 (365)
.|.+.+...|....
T Consensus 143 ~~~~al~~~p~~~~ 156 (213)
T 1hh8_A 143 QLALATSMKSEPRH 156 (213)
T ss_dssp HHHHHHTTCCSGGG
T ss_pred HHHHHHHcCccccc
Confidence 58888887776543
No 81
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.48 E-value=6.5e-13 Score=115.70 Aligned_cols=130 Identities=12% Similarity=0.047 Sum_probs=98.0
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHhCCCCCH
Q 017811 188 DGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGEDENNV 267 (365)
Q Consensus 188 ~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~~~p~n~ 267 (365)
.|..+++.|+|++|+..|++++.+.|.+.. +++++|.+|..+|++++|+.+|+++++++|+++
T Consensus 60 lg~~~~~~g~~~~A~~~~~~al~~~p~~~~-----------------~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~ 122 (208)
T 3urz_A 60 LALAYKKNRNYDKAYLFYKELLQKAPNNVD-----------------CLEACAEMQVCRGQEKDALRMYEKILQLEADNL 122 (208)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHCCCCHH-----------------HHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCH
Confidence 999999999999999999999999998744 499999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCC--HHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCcc
Q 017811 268 KALFRRGKARAELGQ--TDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEIYKGIFGPRPEPK 336 (365)
Q Consensus 268 ka~~~~g~a~~~l~~--~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~~~~~~~~~k~~y~kmf~~~~~~~ 336 (365)
.+++.+|.+|...++ ...+...+++++...|. ..+...++.+....+++. +....|.+.+...|+..
T Consensus 123 ~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~a~~~~g~~~~~~~~~~-~A~~~~~~al~l~P~~~ 191 (208)
T 3urz_A 123 AANIFLGNYYYLTAEQEKKKLETDYKKLSSPTKM-QYARYRDGLSKLFTTRYE-KARNSLQKVILRFPSTE 191 (208)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHC---CCCHH-HHHHHHHHHHHHHHHTHH-HHHHHHHHHTTTSCCHH
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCCch-hHHHHHHHHHHHHccCHH-HHHHHHHHHHHhCCCHH
Confidence 999999999877654 34556666666543332 123334444444444443 35555777777777543
No 82
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.47 E-value=3e-13 Score=121.50 Aligned_cols=140 Identities=14% Similarity=0.158 Sum_probs=119.0
Q ss_pred HHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHh
Q 017811 182 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLG 261 (365)
Q Consensus 182 a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~ 261 (365)
+..+...|..+++.|+|.+|+..|++++...|.+.. ...+++++|.||+++|+|++|+..|++++.
T Consensus 15 ~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~~~--------------~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~ 80 (261)
T 3qky_A 15 PQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRTHEW--------------AADAQFYLARAYYQNKEYLLAASEYERFIQ 80 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSCSTT--------------HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCcc--------------hHHHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 567889999999999999999999999999987632 134599999999999999999999999999
Q ss_pred CCCCC---HHHHHHHHHHHHH--------cCCHHHHHHHHHHHHhhCCCcHHHH-----------------HHHHHHHHH
Q 017811 262 EDENN---VKALFRRGKARAE--------LGQTDAAREDFLKAGKFAPEDKSIA-----------------RELRLLAEH 313 (365)
Q Consensus 262 ~~p~n---~ka~~~~g~a~~~--------l~~~~~A~~~l~~al~l~P~n~~~~-----------------~~l~~l~~~ 313 (365)
++|++ ..++|.+|.++.. +|++++|+..|++++.++|++..+. ..++.+...
T Consensus 81 ~~p~~~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~ 160 (261)
T 3qky_A 81 IYQIDPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYER 160 (261)
T ss_dssp HCTTCTTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HCCCCchhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98854 6799999999999 9999999999999999999986655 555777666
Q ss_pred HHHHHHHHHHHHhcccCCCCCcc
Q 017811 314 EKAVYKKQKEIYKGIFGPRPEPK 336 (365)
Q Consensus 314 ~~~~~~~~k~~y~kmf~~~~~~~ 336 (365)
.+++.++. ..|.+++...|+..
T Consensus 161 ~g~~~~A~-~~~~~~l~~~p~~~ 182 (261)
T 3qky_A 161 RELYEAAA-VTYEAVFDAYPDTP 182 (261)
T ss_dssp TTCHHHHH-HHHHHHHHHCTTST
T ss_pred ccCHHHHH-HHHHHHHHHCCCCc
Confidence 66666554 45888887777644
No 83
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*
Probab=99.46 E-value=1e-13 Score=115.28 Aligned_cols=66 Identities=20% Similarity=0.245 Sum_probs=60.8
Q ss_pred CCCCCEEEEEEEEEEcCCCeeeccCcCCCCcceeecCCCCchhhhHHHHHhcCCcCcEEEEEeccccccCCCCC
Q 017811 67 PSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSSMKAGEHALLHVGWELGYGKEGS 140 (365)
Q Consensus 67 p~~g~~v~v~y~~~~~~~g~~fd~s~~~~~p~~f~lg~~~~~i~g~e~~l~~Mk~GE~~~~~i~~~~~yg~~g~ 140 (365)
+..|+.|+|+|+++ .+ |++||+|+ +.|.+|.+ ++|+||+.+|.+|++||++.|.|||..+||+.+.
T Consensus 3 i~~gd~V~v~Y~g~-~d-G~~fdss~-----~~f~~G~g-~vipG~e~aL~Gm~~Ge~~~v~ipp~~aYG~~~~ 68 (158)
T 3cgm_A 3 VGQDKVVTIRYTLQ-VE-GEVLDQGE-----LSYLHGHR-NLIPGLEEALEGREEGEAFQAHVPAEKAYGPHDP 68 (158)
T ss_dssp CCTTEEEEEEEEEE-ET-TEEEEEEE-----EEEETTSS-SSCHHHHHHHTTCBTTCEEEEEECGGGTTCCCCG
T ss_pred CCCCCEEEEEEEEE-EC-CEEEEeeE-----EEEEECCC-CcChHHHHHHcCCCCCCEEEEEECcHHHcCCCCc
Confidence 56899999999999 66 99999985 89999999 8999999999999999999999999999998653
No 84
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.46 E-value=4.6e-13 Score=118.00 Aligned_cols=140 Identities=13% Similarity=0.089 Sum_probs=111.7
Q ss_pred HHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHh
Q 017811 182 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLG 261 (365)
Q Consensus 182 a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~ 261 (365)
+..+...|..++..|+|++|+..|++++...|.+... ..+++++|.||+++|+|++|+..++++++
T Consensus 4 ~~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~~~~--------------~~a~~~lg~~~~~~~~~~~A~~~~~~~l~ 69 (225)
T 2yhc_A 4 PNEIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYS--------------QQVQLDLIYAYYKNADLPLAQAAIDRFIR 69 (225)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTTH--------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHH--------------HHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 4567788999999999999999999999998875321 23589999999999999999999999999
Q ss_pred CCCCCHH---HHHHHHHHHHH------------------cCCHHHHHHHHHHHHhhCCCcHHHHHH--------------
Q 017811 262 EDENNVK---ALFRRGKARAE------------------LGQTDAAREDFLKAGKFAPEDKSIARE-------------- 306 (365)
Q Consensus 262 ~~p~n~k---a~~~~g~a~~~------------------l~~~~~A~~~l~~al~l~P~n~~~~~~-------------- 306 (365)
.+|++.. ++|.+|.++.. +|++++|+..|+++++.+|++..+...
T Consensus 70 ~~P~~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~ 149 (225)
T 2yhc_A 70 LNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKY 149 (225)
T ss_dssp HCTTCTTHHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHHHHH
T ss_pred HCcCCCcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHHHHHHHHHHHHHHHHHH
Confidence 9999875 89999999987 578999999999999999998655432
Q ss_pred ---HHHHHHHHHHHHHHHHHHHhcccCCCCCcc
Q 017811 307 ---LRLLAEHEKAVYKKQKEIYKGIFGPRPEPK 336 (365)
Q Consensus 307 ---l~~l~~~~~~~~~~~k~~y~kmf~~~~~~~ 336 (365)
++.+....+++. .....|.+++...|+..
T Consensus 150 ~~~~a~~~~~~~~~~-~A~~~~~~~l~~~p~~~ 181 (225)
T 2yhc_A 150 EYSVAEYYTERGAWV-AVVNRVEGMLRDYPDTQ 181 (225)
T ss_dssp HHHHHHHHHHHTCHH-HHHHHHHHHHHHSTTSH
T ss_pred HHHHHHHHHHcCcHH-HHHHHHHHHHHHCcCCC
Confidence 223333333333 34455888887777654
No 85
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.45 E-value=6e-13 Score=102.12 Aligned_cols=102 Identities=20% Similarity=0.223 Sum_probs=95.2
Q ss_pred HHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHh
Q 017811 182 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLG 261 (365)
Q Consensus 182 a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~ 261 (365)
+..+...|..++..|+|.+|+..|.+++...|.+.. +++++|.++..+|+|++|+..++++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~-----------------~~~~~a~~~~~~~~~~~A~~~~~~a~~ 68 (112)
T 2kck_A 6 PEEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESK-----------------YWLMKGKALYNLERYEEAVDCYNYVIN 68 (112)
T ss_dssp TTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHH-----------------HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHH-----------------HHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 345678999999999999999999999999987633 489999999999999999999999999
Q ss_pred CCCC--CHHHHHHHHHHHHHc-CCHHHHHHHHHHHHhhCCCc
Q 017811 262 EDEN--NVKALFRRGKARAEL-GQTDAAREDFLKAGKFAPED 300 (365)
Q Consensus 262 ~~p~--n~ka~~~~g~a~~~l-~~~~~A~~~l~~al~l~P~n 300 (365)
++|. +..+++.+|.++..+ |++++|+..|++++...|.+
T Consensus 69 ~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~p~~ 110 (112)
T 2kck_A 69 VIEDEYNKDVWAAKADALRYIEGKEVEAEIAEARAKLEHHHH 110 (112)
T ss_dssp TSCCTTCHHHHHHHHHHHTTCSSCSHHHHHHHHHHGGGCCCC
T ss_pred hCcccchHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhcccCC
Confidence 9999 999999999999999 99999999999999999975
No 86
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.45 E-value=1.2e-13 Score=114.06 Aligned_cols=121 Identities=11% Similarity=0.011 Sum_probs=104.8
Q ss_pred HHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHcCC
Q 017811 203 QQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQ 282 (365)
Q Consensus 203 ~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~~~p~n~ka~~~~g~a~~~l~~ 282 (365)
..|++++.+.|.+.. +++++|.+++..|+|++|+..+++++.++|.++.+|+.+|.++..+|+
T Consensus 8 ~~~~~al~~~p~~~~-----------------~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~ 70 (148)
T 2vgx_A 8 GTIAMLNEISSDTLE-----------------QLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQ 70 (148)
T ss_dssp CSHHHHTTCCHHHHH-----------------HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred hhHHHHHcCCHhhHH-----------------HHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhh
Confidence 457788888776533 489999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCccccchh
Q 017811 283 TDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEIYKGIFGPRPEPKQKKNW 341 (365)
Q Consensus 283 ~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~~~~~~~~~k~~y~kmf~~~~~~~~~~~~ 341 (365)
|++|+..|++++.++|++..+...++.+....++..++. ..|.+.+...|+......+
T Consensus 71 ~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~~A~-~~~~~al~~~p~~~~~~~~ 128 (148)
T 2vgx_A 71 YDLAIHSYSYGAVMDIXEPRFPFHAAECLLQXGELAEAE-SGLFLAQELIANXPEFXEL 128 (148)
T ss_dssp HHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHH-HHHHHHHHHHTTCGGGHHH
T ss_pred HHHHHHHHHHHHhcCCCCchHHHHHHHHHHHcCCHHHHH-HHHHHHHHHCcCCCcchHH
Confidence 999999999999999999999999999988888877665 4588888777765544333
No 87
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.44 E-value=1.9e-12 Score=109.07 Aligned_cols=112 Identities=12% Similarity=0.120 Sum_probs=85.9
Q ss_pred HHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHH-HHHhcCH--HHHHHHHHH
Q 017811 182 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAAC-LLKLKRY--EEAIGQCSL 258 (365)
Q Consensus 182 a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~-~~kl~~~--~~A~~~~~~ 258 (365)
+..+...|..++..|+|.+|+..|.+++.+.|.+.. +++++|.+ +...|++ ++|+..+.+
T Consensus 44 ~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~-----------------~~~~la~~l~~~~~~~~~~~A~~~~~~ 106 (177)
T 2e2e_A 44 SEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAE-----------------LYAALATVLYYQASQHMTAQTRAMIDK 106 (177)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHH-----------------HHHHHHHHHHHHTTTCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHH-----------------HHHHHHHHHHHhcCCcchHHHHHHHHH
Confidence 345677788888888888888888888888776533 37788888 7778887 888888888
Q ss_pred HHhCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHH
Q 017811 259 VLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLL 310 (365)
Q Consensus 259 aL~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l 310 (365)
++.++|++..+++.+|.++..+|++++|+..|++++.++|++......+..+
T Consensus 107 al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~i 158 (177)
T 2e2e_A 107 ALALDSNEITALMLLASDAFMQANYAQAIELWQKVMDLNSPRINRTQLVESI 158 (177)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTSCHHHHHHHH
T ss_pred HHHhCCCcHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCccHHHHHHHH
Confidence 8888888888888888888888888888888888888888775544444433
No 88
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.43 E-value=3.1e-13 Score=138.81 Aligned_cols=136 Identities=13% Similarity=0.012 Sum_probs=121.4
Q ss_pred HhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHhCC
Q 017811 184 RRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGED 263 (365)
Q Consensus 184 ~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~~~ 263 (365)
.+...|..++..|+|++|+..|+++++..|.+.. +++++|.+|+.+|+|++|+.+|+++++++
T Consensus 435 ~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~-----------------a~~~lg~~~~~~g~~~~A~~~~~~al~l~ 497 (681)
T 2pzi_A 435 LPLMEVRALLDLGDVAKATRKLDDLAERVGWRWR-----------------LVWYRAVAELLTGDYDSATKHFTEVLDTF 497 (681)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHH-----------------HHHHHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhccCcchHH-----------------HHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 4667889999999999999999999999998754 49999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCcccc
Q 017811 264 ENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEIYKGIFGPRPEPKQK 338 (365)
Q Consensus 264 p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~~~~~~~~~k~~y~kmf~~~~~~~~~ 338 (365)
|++..+++.+|.++..+|+|++ +..|+++++++|++..+...++.+...++++.++. ..|.+.+...|.....
T Consensus 498 P~~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~-~~~~~al~l~P~~~~a 570 (681)
T 2pzi_A 498 PGELAPKLALAATAELAGNTDE-HKFYQTVWSTNDGVISAAFGLARARSAEGDRVGAV-RTLDEVPPTSRHFTTA 570 (681)
T ss_dssp TTCSHHHHHHHHHHHHHTCCCT-TCHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHH-HHHHTSCTTSTTHHHH
T ss_pred CCChHHHHHHHHHHHHcCChHH-HHHHHHHHHhCCchHHHHHHHHHHHHHcCCHHHHH-HHHHhhcccCcccHHH
Confidence 9999999999999999999999 99999999999999999999999988888776555 4599999888765443
No 89
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.43 E-value=1.6e-12 Score=102.50 Aligned_cols=131 Identities=22% Similarity=0.226 Sum_probs=113.2
Q ss_pred HhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHhCC
Q 017811 184 RRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGED 263 (365)
Q Consensus 184 ~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~~~ 263 (365)
.+...|..++..|++++|+..|.+++...|.+.. ++.++|.++...|++++|+..+.+++..+
T Consensus 3 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~-----------------~~~~~a~~~~~~~~~~~A~~~~~~~~~~~ 65 (136)
T 2fo7_A 3 AWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAE-----------------AWYNLGNAYYKQGDYDEAIEYYQKALELD 65 (136)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHcCcHHHHHHHHHHHHHcCCcchh-----------------HHHHHHHHHHHhcCHHHHHHHHHHHHHHC
Confidence 4667899999999999999999999998876532 48899999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCC
Q 017811 264 ENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEIYKGIFGPR 332 (365)
Q Consensus 264 p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~~~~~~~~~k~~y~kmf~~~ 332 (365)
|.+..+++.+|.++...|++++|+..|++++.+.|.+..+...+..+....++..+. ...|.+++...
T Consensus 66 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A-~~~~~~~~~~~ 133 (136)
T 2fo7_A 66 PRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEA-IEYYQKALELD 133 (136)
T ss_dssp TTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHH-HHHHHHHHHHS
T ss_pred CCchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHccHHHH-HHHHHHHHccC
Confidence 999999999999999999999999999999999999998888888887666655544 34466655433
No 90
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.43 E-value=5.7e-13 Score=112.30 Aligned_cols=137 Identities=11% Similarity=0.025 Sum_probs=117.0
Q ss_pred HhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHhCC
Q 017811 184 RRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGED 263 (365)
Q Consensus 184 ~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~~~ 263 (365)
.+...++.++..|+|++|+..|.+++...|.+.. +++++|.+|..+|+|++|+.++.+++.++
T Consensus 12 ~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~-----------------~~~~lg~~~~~~~~~~~A~~~~~~al~~~ 74 (177)
T 2e2e_A 12 RQRDPLHQFASQQNPEAQLQALQDKIRANPQNSE-----------------QWALLGEYYLWQNDYSNSLLAYRQALQLR 74 (177)
T ss_dssp CSSTTTCCCC-----CCCCHHHHHHHHHCCSCHH-----------------HHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHhhhhhhhhhccCHHHHHHHHHHHHHhCCCcHH-----------------HHHHHHHHHHHcCCHHHHHHHHHHHHHcC
Confidence 4456677789999999999999999999998643 48999999999999999999999999999
Q ss_pred CCCHHHHHHHHHH-HHHcCCH--HHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCcccc
Q 017811 264 ENNVKALFRRGKA-RAELGQT--DAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEIYKGIFGPRPEPKQK 338 (365)
Q Consensus 264 p~n~ka~~~~g~a-~~~l~~~--~~A~~~l~~al~l~P~n~~~~~~l~~l~~~~~~~~~~~k~~y~kmf~~~~~~~~~ 338 (365)
|.++.+++.+|.+ +...|++ ++|+..|++++.++|++..+...++.+....+++.++. ..|.+++...|.....
T Consensus 75 p~~~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~-~~~~~al~~~p~~~~~ 151 (177)
T 2e2e_A 75 GENAELYAALATVLYYQASQHMTAQTRAMIDKALALDSNEITALMLLASDAFMQANYAQAI-ELWQKVMDLNSPRINR 151 (177)
T ss_dssp CSCHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHH-HHHHHHHHTCCTTSCH
T ss_pred CCCHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcccHHHHH-HHHHHHHhhCCCCccH
Confidence 9999999999999 8899999 99999999999999999999999999988887776554 5588888888876543
No 91
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.42 E-value=3.1e-12 Score=114.75 Aligned_cols=142 Identities=15% Similarity=0.128 Sum_probs=119.5
Q ss_pred HHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHH--------hcCHHHHH
Q 017811 182 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLK--------LKRYEEAI 253 (365)
Q Consensus 182 a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~k--------l~~~~~A~ 253 (365)
...+...|..++..|+|.+|+..|++++...|.+... ..+++++|.|++. +|++++|+
T Consensus 52 ~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~--------------~~a~~~lg~~~~~~~~~~~~~~~~~~~A~ 117 (261)
T 3qky_A 52 ADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRV--------------PQAEYERAMCYYKLSPPYELDQTDTRKAI 117 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTH--------------HHHHHHHHHHHHHHCCCTTSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchh--------------HHHHHHHHHHHHHhcccccccchhHHHHH
Confidence 4567889999999999999999999999999875332 3459999999999 99999999
Q ss_pred HHHHHHHhCCCCCHHHH-----------------HHHHHHHHHcCCHHHHHHHHHHHHhhCCC---cHHHHHHHHHHHHH
Q 017811 254 GQCSLVLGEDENNVKAL-----------------FRRGKARAELGQTDAAREDFLKAGKFAPE---DKSIARELRLLAEH 313 (365)
Q Consensus 254 ~~~~~aL~~~p~n~ka~-----------------~~~g~a~~~l~~~~~A~~~l~~al~l~P~---n~~~~~~l~~l~~~ 313 (365)
..+++++..+|++..+. +.+|.+|..+|+|++|+..|++++...|+ ...+...++.+...
T Consensus 118 ~~~~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~ 197 (261)
T 3qky_A 118 EAFQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDTPWADDALVGAMRAYIA 197 (261)
T ss_dssp HHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHH
Confidence 99999999999986655 99999999999999999999999999998 45677778877765
Q ss_pred HH---------HHHHHHHHHHhcccCCCCCccc
Q 017811 314 EK---------AVYKKQKEIYKGIFGPRPEPKQ 337 (365)
Q Consensus 314 ~~---------~~~~~~k~~y~kmf~~~~~~~~ 337 (365)
++ ...++....|.+++...|+...
T Consensus 198 ~g~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~ 230 (261)
T 3qky_A 198 YAEQSVRARQPERYRRAVELYERLLQIFPDSPL 230 (261)
T ss_dssp HHHTSCGGGHHHHHHHHHHHHHHHHHHCTTCTH
T ss_pred hcccchhhcccchHHHHHHHHHHHHHHCCCChH
Confidence 51 3334556668988887776543
No 92
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.42 E-value=1.8e-12 Score=116.17 Aligned_cols=150 Identities=17% Similarity=0.096 Sum_probs=78.7
Q ss_pred HhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhh--------hhhHHHH---HH---------HhhchhhhHHHHHH
Q 017811 184 RRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQL--------FGKYRDM---AL---------AVKNPCHLNMAACL 243 (365)
Q Consensus 184 ~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~--------~~~~~~~---~~---------~~~~~~~~nla~~~ 243 (365)
.+...|..++..|+|++|+..|++++...|.+...-. .+...+. .. .....++.++|.+|
T Consensus 5 ~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~lg~~~ 84 (272)
T 3u4t_A 5 VEFRYADFLFKNNNYAEAIEVFNKLEAKKYNSPYIYNRRAVCYYELAKYDLAQKDIETYFSKVNATKAKSADFEYYGKIL 84 (272)
T ss_dssp CHHHHHHHHHTTTCHHHHHHHHHHHHHTTCCCSTTHHHHHHHHHHTTCHHHHHHHHHHHHTTSCTTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHhccCchhHHHHHHHHHHHHH
Confidence 4556677777777777777777777777766432100 0000000 00 00112245556666
Q ss_pred HHhcCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHH-HHHHHHHHHHHHHH
Q 017811 244 LKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELR-LLAEHEKAVYKKQK 322 (365)
Q Consensus 244 ~kl~~~~~A~~~~~~aL~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~-~l~~~~~~~~~~~k 322 (365)
..+|++++|+.++.++++++|.++.+++.+|.++..+|++++|+..|++++.++|.+..+...++ .+.... ..++..
T Consensus 85 ~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~--~~~~A~ 162 (272)
T 3u4t_A 85 MKKGQDSLAIQQYQAAVDRDTTRLDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTTDPKVFYELGQAYYYNK--EYVKAD 162 (272)
T ss_dssp HHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHGGGCCSSCCCHHHHHHHHHHHHHTT--CHHHHH
T ss_pred HHcccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHccCHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHHH--HHHHHH
Confidence 66666666666666666666655556666666666666666666666666665555555555555 333222 222333
Q ss_pred HHHhcccCCCCCc
Q 017811 323 EIYKGIFGPRPEP 335 (365)
Q Consensus 323 ~~y~kmf~~~~~~ 335 (365)
..|.+++...|..
T Consensus 163 ~~~~~a~~~~p~~ 175 (272)
T 3u4t_A 163 SSFVKVLELKPNI 175 (272)
T ss_dssp HHHHHHHHHSTTC
T ss_pred HHHHHHHHhCccc
Confidence 4455555444433
No 93
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.42 E-value=3.5e-12 Score=118.04 Aligned_cols=122 Identities=22% Similarity=0.244 Sum_probs=109.9
Q ss_pred HHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHhC
Q 017811 183 DRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGE 262 (365)
Q Consensus 183 ~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~~ 262 (365)
......|..++..|++.+|+..|.+++...|.+... ...++.++|.++.++|++++|+..+++++++
T Consensus 235 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~-------------~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 301 (359)
T 3ieg_A 235 NKLIESAEELIRDGRYTDATSKYESVMKTEPSVAEY-------------TVRSKERICHCFSKDEKPVEAIRICSEVLQM 301 (359)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSSHHH-------------HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHH-------------HHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Confidence 344566999999999999999999999999886332 3345889999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHH
Q 017811 263 DENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAV 317 (365)
Q Consensus 263 ~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~~~~~ 317 (365)
+|+++.+++.+|.++..+|++++|+..|+++++++|++..+...+..+...+++.
T Consensus 302 ~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~~~~~ 356 (359)
T 3ieg_A 302 EPDNVNALKDRAEAYLIEEMYDEAIQDYEAAQEHNENDQQIREGLEKAQRLLKQS 356 (359)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999887776654
No 94
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.41 E-value=1.1e-12 Score=128.96 Aligned_cols=153 Identities=16% Similarity=0.107 Sum_probs=76.3
Q ss_pred HHHhhhhhhhhhhhhhH-HHHHHHHHHHHHhhccchhhhh--------hhhHHHHHHHh--------hchhhhHHHHHHH
Q 017811 182 ADRRKMDGNALFKEEKL-EEAMQQYEMAIAYMGDDFMFQL--------FGKYRDMALAV--------KNPCHLNMAACLL 244 (365)
Q Consensus 182 a~~~k~~G~~~~~~~~y-~~A~~~y~~al~~~~~~~~~~~--------~~~~~~~~~~~--------~~~~~~nla~~~~ 244 (365)
+..+...|..++..|+| ++|+..|++|+++.|.+...-. .+...+....+ ...++.++|.+|.
T Consensus 102 a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~lg~~~~ 181 (474)
T 4abn_A 102 AQALMLKGKALNVTPDYSPEAEVLLSKAVKLEPELVEAWNQLGEVYWKKGDVTSAHTCFSGALTHCKNKVSLQNLSMVLR 181 (474)
T ss_dssp HHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCCCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhccccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCHHHHHHHHHHHH
Confidence 34556677777777777 7777777777777766432100 00000000000 0123455555555
Q ss_pred Hh---------cCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHc--------CCHHHHHHHHHHHHhhCC---CcHHHH
Q 017811 245 KL---------KRYEEAIGQCSLVLGEDENNVKALFRRGKARAEL--------GQTDAAREDFLKAGKFAP---EDKSIA 304 (365)
Q Consensus 245 kl---------~~~~~A~~~~~~aL~~~p~n~ka~~~~g~a~~~l--------~~~~~A~~~l~~al~l~P---~n~~~~ 304 (365)
.+ |+|++|+..++++++++|++..+|+.+|.+|..+ |++++|+..|++++.++| ++..+.
T Consensus 182 ~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~ 261 (474)
T 4abn_A 182 QLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKVDRKASSNPDLH 261 (474)
T ss_dssp TCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCGGGGGCHHHH
T ss_pred HhccCChhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHhCCCcccCHHHH
Confidence 55 5555555555555555555555555555555555 555555555555555555 555555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccCCCCCc
Q 017811 305 RELRLLAEHEKAVYKKQKEIYKGIFGPRPEP 335 (365)
Q Consensus 305 ~~l~~l~~~~~~~~~~~k~~y~kmf~~~~~~ 335 (365)
..++.+....+++.++. ..|.+.+...|+.
T Consensus 262 ~~lg~~~~~~g~~~~A~-~~~~~al~l~p~~ 291 (474)
T 4abn_A 262 LNRATLHKYEESYGEAL-EGFSQAAALDPAW 291 (474)
T ss_dssp HHHHHHHHHTTCHHHHH-HHHHHHHHHCTTC
T ss_pred HHHHHHHHHcCCHHHHH-HHHHHHHHhCCCC
Confidence 55555544444443332 2255554444443
No 95
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.41 E-value=1.2e-12 Score=131.25 Aligned_cols=137 Identities=13% Similarity=0.048 Sum_probs=122.3
Q ss_pred HHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHH
Q 017811 181 AADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVL 260 (365)
Q Consensus 181 ~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL 260 (365)
.+..+...|..++..|+|++|+..|++|+++.|.+.. +++++|.+|..+|++++|+.++++++
T Consensus 22 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~-----------------~~~~lg~~~~~~g~~~~A~~~~~~al 84 (568)
T 2vsy_A 22 DFVAWLMLADAELGMGDTTAGEMAVQRGLALHPGHPE-----------------AVARLGRVRWTQQRHAEAAVLLQQAS 84 (568)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTTCHH-----------------HHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH-----------------HHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 4567889999999999999999999999999988643 49999999999999999999999999
Q ss_pred hCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHH---HHHHHHHHHHHhcccCCCCCc
Q 017811 261 GEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHE---KAVYKKQKEIYKGIFGPRPEP 335 (365)
Q Consensus 261 ~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~~---~~~~~~~k~~y~kmf~~~~~~ 335 (365)
+++|++..+++.+|.+|..+|++++|+..|+++++++|++..+...+..+.... ++..+. ...|.+.+...|..
T Consensus 85 ~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~g~~~~A-~~~~~~al~~~p~~ 161 (568)
T 2vsy_A 85 DAAPEHPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWRRRLCDWRALDVL-SAQVRAAVAQGVGA 161 (568)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCTTHHHH-HHHHHHHHHHTCCC
T ss_pred hcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhccccHHHH-HHHHHHHHhcCCcc
Confidence 999999999999999999999999999999999999999999999999998877 665544 44577777666653
No 96
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.40 E-value=6.7e-13 Score=130.49 Aligned_cols=146 Identities=13% Similarity=0.095 Sum_probs=119.7
Q ss_pred HHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhh-------hhh---------hhHHHHHHHh---------hchhh
Q 017811 182 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMF-------QLF---------GKYRDMALAV---------KNPCH 236 (365)
Q Consensus 182 a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~-------~~~---------~~~~~~~~~~---------~~~~~ 236 (365)
+..+...|..++..|+|++|+..|++|+.+.|..... ... +...+....+ ...++
T Consensus 137 ~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 216 (474)
T 4abn_A 137 VEAWNQLGEVYWKKGDVTSAHTCFSGALTHCKNKVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSW 216 (474)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCCCHHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCCHHHH
Confidence 4567889999999999999999999999999862110 001 1111111111 13578
Q ss_pred hHHHHHHHHh--------cCHHHHHHHHHHHHhCCC---CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHH
Q 017811 237 LNMAACLLKL--------KRYEEAIGQCSLVLGEDE---NNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIAR 305 (365)
Q Consensus 237 ~nla~~~~kl--------~~~~~A~~~~~~aL~~~p---~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~ 305 (365)
+++|.+|..+ |+|++|+.+|+++++++| .++.+|+.+|.+|..+|+|++|+..|+++++++|++..++.
T Consensus 217 ~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~a~~ 296 (474)
T 4abn_A 217 YILGNAYLSLYFNTGQNPKISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFSQAAALDPAWPEPQQ 296 (474)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHHhhccccchHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHH
Confidence 9999999999 999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcc
Q 017811 306 ELRLLAEHEKAVYKKQKEIYKGI 328 (365)
Q Consensus 306 ~l~~l~~~~~~~~~~~k~~y~km 328 (365)
.+..+...+++..+.... |.++
T Consensus 297 ~l~~~~~~lg~~~eAi~~-~~~~ 318 (474)
T 4abn_A 297 REQQLLEFLSRLTSLLES-KGKT 318 (474)
T ss_dssp HHHHHHHHHHHHHHHHHH-TTTC
T ss_pred HHHHHHHHHHHHHHHHHH-hccc
Confidence 999998888877666543 4433
No 97
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.40 E-value=4.5e-12 Score=113.41 Aligned_cols=134 Identities=22% Similarity=0.107 Sum_probs=112.4
Q ss_pred HHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHH
Q 017811 180 GAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLV 259 (365)
Q Consensus 180 ~~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~a 259 (365)
..+..+...|..++..|+|.+|+..|.+++...|.+.. ++.++|.+|..+|+|++|+.++.++
T Consensus 41 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~-----------------~~~~la~~~~~~~~~~~A~~~~~~a 103 (275)
T 1xnf_A 41 ERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPE-----------------VFNYLGIYLTQAGNFDAAYEAFDSV 103 (275)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHH-----------------HHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCcHH-----------------HHHHHHHHHHHccCHHHHHHHHHHH
Confidence 45677889999999999999999999999999988643 4899999999999999999999999
Q ss_pred HhCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCC
Q 017811 260 LGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEIYKGIFGPR 332 (365)
Q Consensus 260 L~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~~~~~~~~~k~~y~kmf~~~ 332 (365)
+.++|.+..+++.+|.++..+|++++|+..|++++.++|++......+..+ ...++. ......|.+.+...
T Consensus 104 l~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~-~~~~~~-~~A~~~~~~~~~~~ 174 (275)
T 1xnf_A 104 LELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRSLWLYLA-EQKLDE-KQAKEVLKQHFEKS 174 (275)
T ss_dssp HHHCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH-HHHHCH-HHHHHHHHHHHHHS
T ss_pred HhcCccccHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCChHHHHHHHHH-HHhcCH-HHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999998666555544 333333 33344455544433
No 98
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.40 E-value=3e-12 Score=113.10 Aligned_cols=133 Identities=12% Similarity=-0.019 Sum_probs=71.5
Q ss_pred HHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHH
Q 017811 180 GAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLV 259 (365)
Q Consensus 180 ~~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~a 259 (365)
+.+......+..+.+.|++.+|+..|.+++...|.+. .++.++|.++...|+|++|+..++++
T Consensus 103 ~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~A~~~~~~a 165 (258)
T 3uq3_A 103 QKSLTEHRTADILTKLRNAEKELKKAEAEAYVNPEKA-----------------EEARLEGKEYFTKSDWPNAVKAYTEM 165 (258)
T ss_dssp HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHH-----------------HHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHhcCchhHHHHHHhHHHHHHHHHHHHHHcCcchH-----------------HHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 3333344445555555556666666665555554421 13555555555555555565555555
Q ss_pred HhCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Q 017811 260 LGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEIYKGIFG 330 (365)
Q Consensus 260 L~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~~~~~~~~~k~~y~kmf~ 330 (365)
+.++|.+..+++.+|.++..+|++++|+..|++++.++|++..+...++.+....++..+.. ..|.+.+.
T Consensus 166 ~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~-~~~~~a~~ 235 (258)
T 3uq3_A 166 IKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIAVKEYASAL-ETLDAART 235 (258)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHH-HHHHHHHH
T ss_pred HhcCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhHHHHH-HHHHHHHH
Confidence 55555555555555555555555555555555555555555555555555555444443322 23444443
No 99
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.40 E-value=5.6e-13 Score=108.69 Aligned_cols=109 Identities=6% Similarity=0.001 Sum_probs=96.0
Q ss_pred hhhHHHHHHHHhcCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHH
Q 017811 235 CHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHE 314 (365)
Q Consensus 235 ~~~nla~~~~kl~~~~~A~~~~~~aL~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~~ 314 (365)
.++++|.++++.|+|++|+..+++++.++|.++.+|+.+|.++..+|+|++|+..|++++.++|+++.+...++.+....
T Consensus 20 ~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~ 99 (142)
T 2xcb_A 20 QLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDINEPRFPFHAAECHLQL 99 (142)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHc
Confidence 48899999999999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred HHHHHHHHHHHhcccCCCCCccccchhHHH
Q 017811 315 KAVYKKQKEIYKGIFGPRPEPKQKKNWLII 344 (365)
Q Consensus 315 ~~~~~~~k~~y~kmf~~~~~~~~~~~~~~~ 344 (365)
++..+... .|.+.+...|.......++..
T Consensus 100 g~~~~A~~-~~~~al~~~p~~~~~~~~~~~ 128 (142)
T 2xcb_A 100 GDLDGAES-GFYSARALAAAQPAHEALAAR 128 (142)
T ss_dssp TCHHHHHH-HHHHHHHHHHTCGGGHHHHHH
T ss_pred CCHHHHHH-HHHHHHHhCCCCcchHHHHHH
Confidence 88776554 488887777765554444433
No 100
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.40 E-value=4e-12 Score=106.20 Aligned_cols=133 Identities=19% Similarity=0.186 Sum_probs=90.9
Q ss_pred HHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHhC
Q 017811 183 DRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGE 262 (365)
Q Consensus 183 ~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~~ 262 (365)
..+...|..++..|++++|+..|.+++...|.+.. ++.++|.++...|++++|+..+.+++..
T Consensus 43 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~-----------------~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 105 (186)
T 3as5_A 43 DVALHLGIAYVKTGAVDRGTELLERSLADAPDNVK-----------------VATVLGLTYVQVQKYDLAVPLLIKVAEA 105 (186)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHH-----------------HHHHHHHHHHHhcCHHHHHHHHHHHHhc
Confidence 34556666777777777777777777776665422 3677777777777777777777777777
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCC
Q 017811 263 DENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEIYKGIFGPRP 333 (365)
Q Consensus 263 ~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~~~~~~~~~k~~y~kmf~~~~ 333 (365)
+|.+..+++.+|.++..+|++++|+..|++++.+.|.+..+...+..+....++..+. ...|.+++...|
T Consensus 106 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A-~~~~~~~~~~~~ 175 (186)
T 3as5_A 106 NPINFNVRFRLGVALDNLGRFDEAIDSFKIALGLRPNEGKVHRAIAFSYEQMGRHEEA-LPHFKKANELDE 175 (186)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHH-HHHHHHHHHHHH
T ss_pred CcHhHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCccchHHHHHHHHHHHHcCCHHHH-HHHHHHHHHcCC
Confidence 7777777777777777777777777777777777777777777777766655554433 333555544333
No 101
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.39 E-value=5.4e-12 Score=121.40 Aligned_cols=136 Identities=24% Similarity=0.265 Sum_probs=115.8
Q ss_pred HhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHhCC
Q 017811 184 RRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGED 263 (365)
Q Consensus 184 ~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~~~ 263 (365)
.+...|..++..|++.+|+..|.+++.+.|.+... ...++.++|.++.++|++++|+..|++++.++
T Consensus 259 ~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~-------------~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~ 325 (450)
T 2y4t_A 259 KLIESAEELIRDGRYTDATSKYESVMKTEPSIAEY-------------TVRSKERICHCFSKDEKPVEAIRVCSEVLQME 325 (450)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCCSSHHH-------------HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchHH-------------HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhC
Confidence 34556999999999999999999999998875331 23469999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCc
Q 017811 264 ENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEIYKGIFGPRPEP 335 (365)
Q Consensus 264 p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~~~~~~~~~k~~y~kmf~~~~~~ 335 (365)
|++..+++.+|.++..+|++++|+..|+++++++|++..+...+..+....+.. ....+...++.....
T Consensus 326 p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~---~~~~~y~~lg~~~~~ 394 (450)
T 2y4t_A 326 PDNVNALKDRAEAYLIEEMYDEAIQDYETAQEHNENDQQIREGLEKAQRLLKQS---QKRDYYKILGVKRNA 394 (450)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHHH---HSCCSGGGSCSSTTC
T ss_pred cccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHhhcc---cchhHHHHhCCCccC
Confidence 999999999999999999999999999999999999999999999886665543 333455666654444
No 102
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.39 E-value=2.3e-12 Score=120.86 Aligned_cols=129 Identities=15% Similarity=0.087 Sum_probs=111.1
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHhhcc--chhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHhCCCC
Q 017811 188 DGNALFKEEKLEEAMQQYEMAIAYMGD--DFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGEDEN 265 (365)
Q Consensus 188 ~G~~~~~~~~y~~A~~~y~~al~~~~~--~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~~~p~ 265 (365)
.|..+...|++.+|+..|++++...|. +.. +++++|.+|..+|++++|+..++++++++|+
T Consensus 183 l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~-----------------~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~ 245 (365)
T 4eqf_A 183 MSKSPVDSSVLEGVKELYLEAAHQNGDMIDPD-----------------LQTGLGVLFHLSGEFNRAIDAFNAALTVRPE 245 (365)
T ss_dssp ------CCHHHHHHHHHHHHHHHHSCSSCCHH-----------------HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHhhhhhHHHHHHHHHHHHHhCcCccCHH-----------------HHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC
Confidence 488999999999999999999999987 422 4899999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCC
Q 017811 266 NVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEIYKGIFGPRPE 334 (365)
Q Consensus 266 n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~~~~~~~~~k~~y~kmf~~~~~ 334 (365)
++.+++.+|.++..+|++++|+..|++++.++|++..+...++.+....+++.++. ..|.+++...|.
T Consensus 246 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~-~~~~~al~~~~~ 313 (365)
T 4eqf_A 246 DYSLWNRLGATLANGDRSEEAVEAYTRALEIQPGFIRSRYNLGISCINLGAYREAV-SNFLTALSLQRK 313 (365)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCHHHH-HHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHCCCHHHHH-HHHHHHHHhCcc
Confidence 99999999999999999999999999999999999999999999988887766554 447777665554
No 103
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.39 E-value=3.3e-12 Score=120.94 Aligned_cols=98 Identities=18% Similarity=0.129 Sum_probs=59.5
Q ss_pred hhHHHHHHHHhcCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHH
Q 017811 236 HLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEK 315 (365)
Q Consensus 236 ~~nla~~~~kl~~~~~A~~~~~~aL~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~~~ 315 (365)
+.++|.++.+.|++++|+..++++++++|.++.+++.+|.++...|++++|+..|+++++++|++..+...+..+....+
T Consensus 274 ~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g 353 (388)
T 1w3b_A 274 YCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQG 353 (388)
T ss_dssp HHHHHHHHHHHSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcC
Confidence 56666666666666666666666666666666666666666666666666666666666666666666666666555544
Q ss_pred HHHHHHHHHHhcccCCCCC
Q 017811 316 AVYKKQKEIYKGIFGPRPE 334 (365)
Q Consensus 316 ~~~~~~k~~y~kmf~~~~~ 334 (365)
+..+. ...|.+++...|+
T Consensus 354 ~~~~A-~~~~~~a~~~~p~ 371 (388)
T 1w3b_A 354 KLQEA-LMHYKEAIRISPT 371 (388)
T ss_dssp CCHHH-HHHHHHHHTTCTT
T ss_pred CHHHH-HHHHHHHHhhCCC
Confidence 44433 3335666555543
No 104
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.39 E-value=9.4e-13 Score=123.57 Aligned_cols=135 Identities=18% Similarity=0.066 Sum_probs=104.2
Q ss_pred HHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHh
Q 017811 182 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLG 261 (365)
Q Consensus 182 a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~ 261 (365)
+..+...|..+++.|+|.+|+..|++++...|.+.. +++++|.+|..+|++++|+..+++++.
T Consensus 65 ~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~-----------------~~~~lg~~~~~~g~~~~A~~~~~~al~ 127 (365)
T 4eqf_A 65 WPGAFEEGLKRLKEGDLPVTILFMEAAILQDPGDAE-----------------AWQFLGITQAENENEQAAIVALQRCLE 127 (365)
T ss_dssp CTTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcCCHH-----------------HHHHHHHHHHHCCCHHHHHHHHHHHHh
Confidence 345678899999999999999999999999987643 489999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHH----------HHHHHHHHHHHHHHHHHHhcccCC
Q 017811 262 EDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIAREL----------RLLAEHEKAVYKKQKEIYKGIFGP 331 (365)
Q Consensus 262 ~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l----------~~l~~~~~~~~~~~k~~y~kmf~~ 331 (365)
++|++..+++.+|.+|..+|++++|+..|++++.++|++..+...+ ..+....++..+ ....|.+++..
T Consensus 128 ~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~-A~~~~~~al~~ 206 (365)
T 4eqf_A 128 LQPNNLKALMALAVSYTNTSHQQDACEALKNWIKQNPKYKYLVKNKKGSPGLTRRMSKSPVDSSVLEG-VKELYLEAAHQ 206 (365)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHCC-------------------CCHHHHH-HHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHccccHHHHHHHHHHHHHhCccchHHHhhhccchHHHHHHHHHHhhhhhHHH-HHHHHHHHHHh
Confidence 9999999999999999999999999999999999888755444333 444444444433 33446666555
Q ss_pred CCC
Q 017811 332 RPE 334 (365)
Q Consensus 332 ~~~ 334 (365)
.|.
T Consensus 207 ~p~ 209 (365)
T 4eqf_A 207 NGD 209 (365)
T ss_dssp SCS
T ss_pred CcC
Confidence 554
No 105
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.38 E-value=3.2e-12 Score=106.75 Aligned_cols=137 Identities=15% Similarity=0.122 Sum_probs=121.0
Q ss_pred HHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHH
Q 017811 181 AADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVL 260 (365)
Q Consensus 181 ~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL 260 (365)
.+..+...|..++..|++.+|+..|.+++...|.+.. ++.++|.++...|++++|+..+.+++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~A~~~~~~~~ 69 (186)
T 3as5_A 7 RQVYYRDKGISHAKAGRYSQAVMLLEQVYDADAFDVD-----------------VALHLGIAYVKTGAVDRGTELLERSL 69 (186)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHTTTCCTTSCCHH-----------------HHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCccChH-----------------HHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 4667888999999999999999999999998887532 48999999999999999999999999
Q ss_pred hCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCc
Q 017811 261 GEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEIYKGIFGPRPEP 335 (365)
Q Consensus 261 ~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~~~~~~~~~k~~y~kmf~~~~~~ 335 (365)
..+|.+..+++.+|.++...|++++|+..|++++.++|.+..+...+..+....++..+. ...|.+++...+..
T Consensus 70 ~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A-~~~~~~~~~~~~~~ 143 (186)
T 3as5_A 70 ADAPDNVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGVALDNLGRFDEA-IDSFKIALGLRPNE 143 (186)
T ss_dssp HHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHH-HHHHHHHHHHCTTC
T ss_pred hcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHHHHcCcHHHH-HHHHHHHHhcCccc
Confidence 999999999999999999999999999999999999999999999999887777666544 44577777665544
No 106
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.38 E-value=3.8e-12 Score=117.79 Aligned_cols=109 Identities=23% Similarity=0.347 Sum_probs=71.6
Q ss_pred HHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHh
Q 017811 182 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLG 261 (365)
Q Consensus 182 a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~ 261 (365)
+..+...|..++..|+|.+|+..|.+++...|.+.. +++++|.|+..+|++++|+..+.+++.
T Consensus 3 ~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~-----------------~~~~~a~~~~~~~~~~~A~~~~~~~~~ 65 (359)
T 3ieg_A 3 VEKHLELGKKLLAAGQLADALSQFHAAVDGDPDNYI-----------------AYYRRATVFLAMGKSKAALPDLTKVIA 65 (359)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcccHH-----------------HHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 456777888888888888888888888888776533 355666666666666666666666666
Q ss_pred CCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC---CcHHHHHHH
Q 017811 262 EDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAP---EDKSIAREL 307 (365)
Q Consensus 262 ~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P---~n~~~~~~l 307 (365)
++|++..+++.+|.++..+|++++|+..|++++.++| ++..+...+
T Consensus 66 ~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~l 114 (359)
T 3ieg_A 66 LKMDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSEQEEKEAESQL 114 (359)
T ss_dssp HCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTSCCCHHHHHHHHHHH
T ss_pred hCCCcchHHHHHHHHHHHcCChHHHHHHHHHHHhcCCcccChHHHHHHH
Confidence 6666666666666666666666666666666666666 555444444
No 107
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.38 E-value=7e-12 Score=109.98 Aligned_cols=135 Identities=16% Similarity=0.123 Sum_probs=101.4
Q ss_pred HHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHh
Q 017811 182 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLG 261 (365)
Q Consensus 182 a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~ 261 (365)
+..+...|..++..|++.+|+..|.+++...|.+.. ++.++|.++..+|++++|+..+++++.
T Consensus 57 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~-----------------~~~~la~~~~~~~~~~~A~~~~~~~~~ 119 (243)
T 2q7f_A 57 AIPYINFANLLSSVNELERALAFYDKALELDSSAAT-----------------AYYGAGNVYVVKEMYKEAKDMFEKALR 119 (243)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCcchH-----------------HHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 456677888889999999999999999988876532 377778888888888888888888888
Q ss_pred CCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCC
Q 017811 262 EDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEIYKGIFGPRPE 334 (365)
Q Consensus 262 ~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~~~~~~~~~k~~y~kmf~~~~~ 334 (365)
.+|.+..+++.+|.++..+|++++|+..|++++.++|++..+...+..+....++..+.. ..|.+++...+.
T Consensus 120 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~-~~~~~~~~~~~~ 191 (243)
T 2q7f_A 120 AGMENGDLFYMLGTVLVKLEQPKLALPYLQRAVELNENDTEARFQFGMCLANEGMLDEAL-SQFAAVTEQDPG 191 (243)
T ss_dssp HTCCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCHHHH-HHHHHHHHHCTT
T ss_pred hCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHcCCHHHHH-HHHHHHHHhCcc
Confidence 888888888888888888888888888888888888877777777777766665554433 346666555443
No 108
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.37 E-value=6.7e-12 Score=118.81 Aligned_cols=154 Identities=15% Similarity=0.122 Sum_probs=120.6
Q ss_pred HHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhh-----------hhhHHHHH---HH---hhchhhhHHHHHHH
Q 017811 182 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQL-----------FGKYRDMA---LA---VKNPCHLNMAACLL 244 (365)
Q Consensus 182 a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~-----------~~~~~~~~---~~---~~~~~~~nla~~~~ 244 (365)
+..+...|..+...|++.+|+..|++++.+.|.+...-. .++-.... .. -...++.++|.+|.
T Consensus 169 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 248 (388)
T 1w3b_A 169 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYY 248 (388)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcCCHHHHHHHHHHHH
Confidence 566777888888888888888888888888776532100 00000000 00 11346889999999
Q ss_pred HhcCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Q 017811 245 KLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEI 324 (365)
Q Consensus 245 kl~~~~~A~~~~~~aL~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~~~~~~~~~k~~ 324 (365)
++|++++|+..++++++++|+++.+++.+|.++..+|++++|+..|+++++++|++..+...+..+....++..+. ...
T Consensus 249 ~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A-~~~ 327 (388)
T 1w3b_A 249 EQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEA-VRL 327 (388)
T ss_dssp HTTCHHHHHHHHHHHHHTCSSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHH-HHH
T ss_pred HcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHcCCHHHH-HHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999888777766554 456
Q ss_pred HhcccCCCCCcc
Q 017811 325 YKGIFGPRPEPK 336 (365)
Q Consensus 325 y~kmf~~~~~~~ 336 (365)
|.+++...|+..
T Consensus 328 ~~~al~~~p~~~ 339 (388)
T 1w3b_A 328 YRKALEVFPEFA 339 (388)
T ss_dssp HHHHTTSCTTCH
T ss_pred HHHHHhcCCCcH
Confidence 999988777543
No 109
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.37 E-value=2.3e-12 Score=113.93 Aligned_cols=153 Identities=18% Similarity=0.196 Sum_probs=111.3
Q ss_pred HHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhh--------hhhHH------HHHHH----------hhchhh
Q 017811 181 AADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQL--------FGKYR------DMALA----------VKNPCH 236 (365)
Q Consensus 181 ~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~--------~~~~~------~~~~~----------~~~~~~ 236 (365)
.+..+...|..++..|+|.+|+..|.+++... .+...-. .+... ..... ....++
T Consensus 4 ~a~~~~~~g~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~ 82 (258)
T 3uq3_A 4 MADKEKAEGNKFYKARQFDEAIEHYNKAWELH-KDITYLNNRAAAEYEKGEYETAISTLNDAVEQGREMRADYKVISKSF 82 (258)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-CCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccccchHHHHHHH
Confidence 45666777777777777777777777777665 3221100 00000 00000 014678
Q ss_pred hHHHHHHHHhcCHHHHHHHHHHHHh--------------------------CCCCCHHHHHHHHHHHHHcCCHHHHHHHH
Q 017811 237 LNMAACLLKLKRYEEAIGQCSLVLG--------------------------EDENNVKALFRRGKARAELGQTDAAREDF 290 (365)
Q Consensus 237 ~nla~~~~kl~~~~~A~~~~~~aL~--------------------------~~p~n~ka~~~~g~a~~~l~~~~~A~~~l 290 (365)
.++|.+|..+|++++|+.++.+++. .+|.+..+++.+|.++..+|++++|+..|
T Consensus 83 ~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~ 162 (258)
T 3uq3_A 83 ARIGNAYHKLGDLKKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEAEAYVNPEKAEEARLEGKEYFTKSDWPNAVKAY 162 (258)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHcccHHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 8999999999999999999999998 77778889999999999999999999999
Q ss_pred HHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCc
Q 017811 291 LKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEIYKGIFGPRPEP 335 (365)
Q Consensus 291 ~~al~l~P~n~~~~~~l~~l~~~~~~~~~~~k~~y~kmf~~~~~~ 335 (365)
++++.++|.+..+...+..+....++..+.. ..|.+.+...|..
T Consensus 163 ~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~-~~~~~al~~~~~~ 206 (258)
T 3uq3_A 163 TEMIKRAPEDARGYSNRAAALAKLMSFPEAI-ADCNKAIEKDPNF 206 (258)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTCHHHHH-HHHHHHHHHCTTC
T ss_pred HHHHhcCcccHHHHHHHHHHHHHhCCHHHHH-HHHHHHHHhCHHH
Confidence 9999999999999988988887777766554 4477777666654
No 110
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.37 E-value=2.5e-12 Score=115.12 Aligned_cols=128 Identities=15% Similarity=0.065 Sum_probs=98.5
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHhCCCCCH
Q 017811 188 DGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGEDENNV 267 (365)
Q Consensus 188 ~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~~~p~n~ 267 (365)
.|..+...|+|++|+..|.+++...|.+ ..++.++|.+|..+|++++|+.++++++.++|.++
T Consensus 80 lg~~~~~~~~~~~A~~~~~~a~~~~~~~-----------------~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~ 142 (272)
T 3u4t_A 80 YGKILMKKGQDSLAIQQYQAAVDRDTTR-----------------LDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTTDP 142 (272)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHSTTC-----------------THHHHHHHHHHHHTTCHHHHHHHHGGGCCSSCCCH
T ss_pred HHHHHHHcccHHHHHHHHHHHHhcCccc-----------------HHHHHHHHHHHHHccCHHHHHHHHHHHhhcCCCcH
Confidence 4555556666666666666666655554 34699999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHH--HHHHHHHHhcccCCC
Q 017811 268 KALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAV--YKKQKEIYKGIFGPR 332 (365)
Q Consensus 268 ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~~~~~--~~~~k~~y~kmf~~~ 332 (365)
.+++.+|...+..+++++|+..|+++++++|++..+...+..+....... .......|.+++...
T Consensus 143 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~ 209 (272)
T 3u4t_A 143 KVFYELGQAYYYNKEYVKADSSFVKVLELKPNIYIGYLWRARANAAQDPDTKQGLAKPYYEKLIEVC 209 (272)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHSTTCSSCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHH
Confidence 99999995555556999999999999999999998888888776665431 112344566666544
No 111
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.37 E-value=6.3e-12 Score=123.64 Aligned_cols=115 Identities=23% Similarity=0.298 Sum_probs=101.0
Q ss_pred CCCCCHHHHHHHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCH
Q 017811 170 RSDMTVEERIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRY 249 (365)
Q Consensus 170 ~~~~~~~e~~~~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~ 249 (365)
...++.++....+..+...|+.+++.|+|.+|+..|++++...|.+.. +++++|.||.++|+|
T Consensus 13 ~~~~~~~~~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~-----------------~~~~la~~~~~~g~~ 75 (537)
T 3fp2_A 13 LKGLSPSQRQAYAVQLKNRGNHFFTAKNFNEAIKYYQYAIELDPNEPV-----------------FYSNISACYISTGDL 75 (537)
T ss_dssp HTTSCHHHHHHHHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHHHTCH
T ss_pred hcCCCcchhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhCCCCcH-----------------HHHHHHHHHHHcCCH
Confidence 456788889999999999999999999999999999999999998643 499999999999999
Q ss_pred HHHHHHHHHHHhCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHH
Q 017811 250 EEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKS 302 (365)
Q Consensus 250 ~~A~~~~~~aL~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~ 302 (365)
++|+..|++++.++|+++.+++.+|.++..+|++++|+..|+ ++.++|+...
T Consensus 76 ~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~-~~~~~~~~~~ 127 (537)
T 3fp2_A 76 EKVIEFTTKALEIKPDHSKALLRRASANESLGNFTDAMFDLS-VLSLNGDFDG 127 (537)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHH-HHC-------
T ss_pred HHHHHHHHHHHhcCCchHHHHHHHHHHHHHcCCHHHHHHHHH-HHhcCCCCCh
Confidence 999999999999999999999999999999999999999996 8888887543
No 112
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.36 E-value=3.1e-13 Score=104.27 Aligned_cols=95 Identities=25% Similarity=0.329 Sum_probs=82.9
Q ss_pred HHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHH
Q 017811 181 AADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVL 260 (365)
Q Consensus 181 ~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL 260 (365)
.+..+...|..++..|+|.+|+..|++++.+.|.+.. +++|+|.||.++|+|++|+.+|++++
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~-----------------~~~~lg~~~~~~g~~~~A~~~~~~al 65 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPV-----------------GYSNKAMALIKLGEYTQAIQMCQQGL 65 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHH-----------------HHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 4567888999999999999999999999999887643 48899999999999999999999999
Q ss_pred hCCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHH
Q 017811 261 GEDENN------VKALFRRGKARAELGQTDAAREDFLK 292 (365)
Q Consensus 261 ~~~p~n------~ka~~~~g~a~~~l~~~~~A~~~l~~ 292 (365)
.++|++ ..+++++|.++..+|+++.|+..+++
T Consensus 66 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 103 (111)
T 2l6j_A 66 RYTSTAEHVAIRSKLQYRLELAQGAVGSVQIPVVEVDE 103 (111)
T ss_dssp TSCSSTTSHHHHHHHHHHHHHHHHHHHCCCCCSSSSSS
T ss_pred HhCCCccHHHHHHHHHHHHHHHHHHHHhHhhhHhHHHH
Confidence 999998 89999999999999988888766654
No 113
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.36 E-value=1.3e-11 Score=106.69 Aligned_cols=151 Identities=12% Similarity=0.010 Sum_probs=94.8
Q ss_pred HHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhh--------hhhhHHHH---HH---H---hhchhhhHHHHHHH
Q 017811 182 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQ--------LFGKYRDM---AL---A---VKNPCHLNMAACLL 244 (365)
Q Consensus 182 a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~--------~~~~~~~~---~~---~---~~~~~~~nla~~~~ 244 (365)
+..+...|..++..|++.+|+..|.+++...|.+...- ..+...+. .. . -...++.++|.++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~ 87 (225)
T 2vq2_A 8 SNIKTQLAMEYMRGQDYRQATASIEDALKSDPKNELAWLVRAEIYQYLKVNDKAQESFRQALSIKPDSAEINNNYGWFLC 87 (225)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCChHHHHHHHHHHH
Confidence 44555666666666666666666666666665532210 00000000 00 0 01234677778888
Q ss_pred Hh-cCHHHHHHHHHHHHh--CCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHH
Q 017811 245 KL-KRYEEAIGQCSLVLG--EDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQ 321 (365)
Q Consensus 245 kl-~~~~~A~~~~~~aL~--~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~~~~~~~~~ 321 (365)
.+ |++++|+..+++++. .+|.+..+++.+|.++..+|++++|+..|++++.++|++..+...+..+....++..+..
T Consensus 88 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~ 167 (225)
T 2vq2_A 88 GRLNRPAESMAYFDKALADPTYPTPYIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQFPPAFKELARTKMLAGQLGDAD 167 (225)
T ss_dssp TTTCCHHHHHHHHHHHHTSTTCSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHH
T ss_pred HhcCcHHHHHHHHHHHHcCcCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHcCCHHHHH
Confidence 88 888888888888777 566667777888888888888888888888888888877777777777766666655443
Q ss_pred HHHHhcccCCCC
Q 017811 322 KEIYKGIFGPRP 333 (365)
Q Consensus 322 k~~y~kmf~~~~ 333 (365)
..|.+++...|
T Consensus 168 -~~~~~~~~~~~ 178 (225)
T 2vq2_A 168 -YYFKKYQSRVE 178 (225)
T ss_dssp -HHHHHHHHHHC
T ss_pred -HHHHHHHHhCC
Confidence 34666665544
No 114
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.36 E-value=1.5e-11 Score=108.87 Aligned_cols=133 Identities=18% Similarity=0.133 Sum_probs=98.5
Q ss_pred hhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHh--C
Q 017811 185 RKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLG--E 262 (365)
Q Consensus 185 ~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~--~ 262 (365)
+...|..++..|++.+|+..|.+++...|.+ ..++.++|.+|..+|++++|+..+.+++. .
T Consensus 74 ~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~-----------------~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~ 136 (252)
T 2ho1_A 74 HAALAVVFQTEMEPKLADEEYRKALASDSRN-----------------ARVLNNYGGFLYEQKRYEEAYQRLLEASQDTL 136 (252)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----------------HHHHHHHHHHHHHTTCHHHHHHHHHHHTTCTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCcCc-----------------HHHHHHHHHHHHHHhHHHHHHHHHHHHHhCcc
Confidence 3444555555555555555555555554443 23578888888889999999999998888 7
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCc
Q 017811 263 DENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEIYKGIFGPRPEP 335 (365)
Q Consensus 263 ~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~~~~~~~~~k~~y~kmf~~~~~~ 335 (365)
+|.+..+++.+|.++..+|++++|+..|++++.++|.+..+...+..+....++..++ ...|.+++...+..
T Consensus 137 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A-~~~~~~~~~~~~~~ 208 (252)
T 2ho1_A 137 YPERSRVFENLGLVSLQMKKPAQAKEYFEKSLRLNRNQPSVALEMADLLYKEREYVPA-RQYYDLFAQGGGQN 208 (252)
T ss_dssp CTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHH-HHHHHHHHTTSCCC
T ss_pred CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHH-HHHHHHHHHhCcCc
Confidence 8888888889999999999999999999999988888888888888887776666544 44577777766643
No 115
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.36 E-value=5.1e-12 Score=110.89 Aligned_cols=138 Identities=19% Similarity=0.149 Sum_probs=121.3
Q ss_pred HHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHh
Q 017811 182 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLG 261 (365)
Q Consensus 182 a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~ 261 (365)
+..+...|..++..|++++|+..|.+++...|.+.. ++.++|.++..+|++++|+..+++++.
T Consensus 91 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~-----------------~~~~~a~~~~~~~~~~~A~~~~~~~~~ 153 (243)
T 2q7f_A 91 ATAYYGAGNVYVVKEMYKEAKDMFEKALRAGMENGD-----------------LFYMLGTVLVKLEQPKLALPYLQRAVE 153 (243)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCCSHH-----------------HHHHHHHHHHHTSCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHH-----------------HHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 345677899999999999999999999999987633 488999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCccc
Q 017811 262 EDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEIYKGIFGPRPEPKQ 337 (365)
Q Consensus 262 ~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~~~~~~~~~k~~y~kmf~~~~~~~~ 337 (365)
.+|.+..+++.+|.++..+|++++|+..|++++.++|++..+...+..+....++..+. ...|.+++...|+...
T Consensus 154 ~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A-~~~~~~~~~~~p~~~~ 228 (243)
T 2q7f_A 154 LNENDTEARFQFGMCLANEGMLDEALSQFAAVTEQDPGHADAFYNAGVTYAYKENREKA-LEMLDKAIDIQPDHML 228 (243)
T ss_dssp HCTTCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCTTHH-HHHHHHHHHHCTTCHH
T ss_pred hCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHccCHHHH-HHHHHHHHccCcchHH
Confidence 99999999999999999999999999999999999999999999999988777766544 4558888777665443
No 116
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.36 E-value=5.8e-12 Score=115.47 Aligned_cols=161 Identities=12% Similarity=0.033 Sum_probs=121.2
Q ss_pred HHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhh--------hhhHHH---HHHH------hhchhhhHHHHHHHH
Q 017811 183 DRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQL--------FGKYRD---MALA------VKNPCHLNMAACLLK 245 (365)
Q Consensus 183 ~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~--------~~~~~~---~~~~------~~~~~~~nla~~~~k 245 (365)
..+...|..++..|+|.+|+..|.+++...|.+...-. .+...+ .... -...++.++|.++..
T Consensus 126 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~ 205 (330)
T 3hym_B 126 PAWIAYGHSFAVESEHDQAMAAYFTAAQLMKGCHLPMLYIGLEYGLTNNSKLAERFFSQALSIAPEDPFVMHEVGVVAFQ 205 (330)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH
Confidence 44666777777777777777777777777765322100 010111 1111 013468999999999
Q ss_pred hcCHHHHHHHHHHHHhCC---------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHH
Q 017811 246 LKRYEEAIGQCSLVLGED---------ENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKA 316 (365)
Q Consensus 246 l~~~~~A~~~~~~aL~~~---------p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~~~~ 316 (365)
+|++++|+..+++++.+. |.++.+++.+|.++..+|++++|+..|+++++++|++..+...++.+....++
T Consensus 206 ~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~ 285 (330)
T 3hym_B 206 NGEWKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRKLKKYAEALDYHRQALVLIPQNASTYSAIGYIHSLMGN 285 (330)
T ss_dssp TTCHHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTC
T ss_pred cccHHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhCccchHHHHHHHHHHHHhcc
Confidence 999999999999999886 77789999999999999999999999999999999999999999999888877
Q ss_pred HHHHHHHHHhcccCCCCCccccchhHHH
Q 017811 317 VYKKQKEIYKGIFGPRPEPKQKKNWLII 344 (365)
Q Consensus 317 ~~~~~k~~y~kmf~~~~~~~~~~~~~~~ 344 (365)
..++ ...|.+.+...|+......+++.
T Consensus 286 ~~~A-~~~~~~al~~~p~~~~~~~~l~~ 312 (330)
T 3hym_B 286 FENA-VDYFHTALGLRRDDTFSVTMLGH 312 (330)
T ss_dssp HHHH-HHHHHTTTTTCSCCHHHHHHHHH
T ss_pred HHHH-HHHHHHHHccCCCchHHHHHHHH
Confidence 7655 45599999888866544443333
No 117
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.35 E-value=7.1e-12 Score=108.32 Aligned_cols=103 Identities=15% Similarity=0.068 Sum_probs=95.6
Q ss_pred HHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHh
Q 017811 182 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLG 261 (365)
Q Consensus 182 a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~ 261 (365)
+..+...|..++..|+|.+|+..|.+++.+.|.+.. +++++|.+|..+|+|++|+.++++++.
T Consensus 37 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~-----------------~~~~lg~~~~~~~~~~~A~~~~~~al~ 99 (213)
T 1hh8_A 37 SRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAV-----------------AYFQRGMLYYQTEKYDLAIKDLKEALI 99 (213)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchH-----------------HHHHHHHHHHHcccHHHHHHHHHHHHH
Confidence 457888999999999999999999999999987633 499999999999999999999999999
Q ss_pred CCCCCH----------------HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcH
Q 017811 262 EDENNV----------------KALFRRGKARAELGQTDAAREDFLKAGKFAPEDK 301 (365)
Q Consensus 262 ~~p~n~----------------ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~ 301 (365)
+.|.+. .+++.+|.++..+|++++|+..|++++.++|++.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~ 155 (213)
T 1hh8_A 100 QLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEPR 155 (213)
T ss_dssp TTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSGG
T ss_pred hCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcCcccc
Confidence 888877 9999999999999999999999999999999863
No 118
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.35 E-value=8.3e-12 Score=114.75 Aligned_cols=138 Identities=12% Similarity=0.027 Sum_probs=105.4
Q ss_pred HHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHH----HhcCHHHHHHHHH
Q 017811 182 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLL----KLKRYEEAIGQCS 257 (365)
Q Consensus 182 a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~----kl~~~~~A~~~~~ 257 (365)
...+...|..+.+.|++++|+..|++++...|++. ..+++.++. ..|++++|+..++
T Consensus 130 ~~~~~~l~~~~~~~g~~~~A~~~l~~~~~~~p~~~-------------------~~~l~~a~~~l~~~~~~~~eA~~~~~ 190 (291)
T 3mkr_A 130 LECMAMTVQILLKLDRLDLARKELKKMQDQDEDAT-------------------LTQLATAWVSLAAGGEKLQDAYYIFQ 190 (291)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH-------------------HHHHHHHHHHHHHCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcCcH-------------------HHHHHHHHHHHHhCchHHHHHHHHHH
Confidence 34566788889999999999999999999887642 234433332 3377888888888
Q ss_pred HHHhCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCccc
Q 017811 258 LVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEIYKGIFGPRPEPKQ 337 (365)
Q Consensus 258 ~aL~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~~~~~~~~~k~~y~kmf~~~~~~~~ 337 (365)
++++.+|+++.+++.+|.++..+|++++|...|++++.++|+|+.+...+..+....++..+.....+++++...|+...
T Consensus 191 ~~l~~~p~~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g~~~eaa~~~~~~~~~~~P~~~~ 270 (291)
T 3mkr_A 191 EMADKCSPTLLLLNGQAACHMAQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQHLGKPPEVTNRYLSQLKDAHRSHPF 270 (291)
T ss_dssp HHHHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCCChH
Confidence 88888888888888888888888888888888888888888888888888877777776666666777777777776554
Q ss_pred c
Q 017811 338 K 338 (365)
Q Consensus 338 ~ 338 (365)
.
T Consensus 271 ~ 271 (291)
T 3mkr_A 271 I 271 (291)
T ss_dssp H
T ss_pred H
Confidence 4
No 119
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.35 E-value=2.9e-12 Score=131.58 Aligned_cols=112 Identities=12% Similarity=0.040 Sum_probs=103.9
Q ss_pred HhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHhCC
Q 017811 184 RRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGED 263 (365)
Q Consensus 184 ~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~~~ 263 (365)
.+...|..++..|+|++|+..|++|+++.|.+.. +++|+|.||.++|+|++ +.+|+++++++
T Consensus 469 a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~-----------------~~~~lg~~~~~~g~~~~-~~~~~~al~~~ 530 (681)
T 2pzi_A 469 LVWYRAVAELLTGDYDSATKHFTEVLDTFPGELA-----------------PKLALAATAELAGNTDE-HKFYQTVWSTN 530 (681)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCSH-----------------HHHHHHHHHHHHTCCCT-TCHHHHHHHHC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChH-----------------HHHHHHHHHHHcCChHH-HHHHHHHHHhC
Confidence 4557889999999999999999999999998744 49999999999999999 99999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHH
Q 017811 264 ENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEH 313 (365)
Q Consensus 264 p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~ 313 (365)
|++..+++++|.++..+|++++|+.+|+++++++|++..++..+..+...
T Consensus 531 P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~~~~~~~~ 580 (681)
T 2pzi_A 531 DGVISAAFGLARARSAEGDRVGAVRTLDEVPPTSRHFTTARLTSAVTLLS 580 (681)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHTSCTTSTTHHHHHHHHHHHTC-
T ss_pred CchHHHHHHHHHHHHHcCCHHHHHHHHHhhcccCcccHHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999888877533
No 120
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.34 E-value=1.6e-11 Score=118.10 Aligned_cols=138 Identities=18% Similarity=0.205 Sum_probs=115.4
Q ss_pred HHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHH
Q 017811 180 GAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLV 259 (365)
Q Consensus 180 ~~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~a 259 (365)
..+..+...|..+++.|+|.+|+..|++++...|.+.. +++++|.||..+|++++|+..+.++
T Consensus 24 ~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~-----------------~~~~l~~~~~~~g~~~~A~~~~~~a 86 (450)
T 2y4t_A 24 ADVEKHLELGKKLLAAGQLADALSQFHAAVDGDPDNYI-----------------AYYRRATVFLAMGKSKAALPDLTKV 86 (450)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCccHH-----------------HHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 56788999999999999999999999999999887633 4899999999999999999999999
Q ss_pred HhCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcH---HHHHHHHHH------------HHHHHHHHHHHHHH
Q 017811 260 LGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDK---SIARELRLL------------AEHEKAVYKKQKEI 324 (365)
Q Consensus 260 L~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~---~~~~~l~~l------------~~~~~~~~~~~k~~ 324 (365)
++++|++..+++.+|.+|..+|++++|+..|++++.++|++. .+...+..+ ....++.. .....
T Consensus 87 l~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~-~A~~~ 165 (450)
T 2y4t_A 87 IQLKMDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSENEEKEAQSQLIKSDEMQRLRSQALNAFGSGDYT-AAIAF 165 (450)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHH-HHHHH
T ss_pred HhcCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCHH-HHHHH
Confidence 999999999999999999999999999999999999999988 666555333 33344333 34455
Q ss_pred HhcccCCCCCc
Q 017811 325 YKGIFGPRPEP 335 (365)
Q Consensus 325 y~kmf~~~~~~ 335 (365)
|.+++...|..
T Consensus 166 ~~~~~~~~~~~ 176 (450)
T 2y4t_A 166 LDKILEVCVWD 176 (450)
T ss_dssp HHHHHHHCTTC
T ss_pred HHHHHHhCCCC
Confidence 77776655543
No 121
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.33 E-value=1.7e-11 Score=97.43 Aligned_cols=100 Identities=17% Similarity=0.143 Sum_probs=88.8
Q ss_pred hhhHHHHHHHHhcCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHH
Q 017811 235 CHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHE 314 (365)
Q Consensus 235 ~~~nla~~~~kl~~~~~A~~~~~~aL~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~~ 314 (365)
.++++|.++++.|++++|+..+++++.++|+++.+++.+|.++..+|++++|+..|+++++++|++..+...++.+....
T Consensus 19 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~~ 98 (121)
T 1hxi_A 19 NPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTNE 98 (121)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred HHHHHHHHHHHhcccCCCCCc
Q 017811 315 KAVYKKQKEIYKGIFGPRPEP 335 (365)
Q Consensus 315 ~~~~~~~k~~y~kmf~~~~~~ 335 (365)
++..+.. ..|.+.+...|..
T Consensus 99 g~~~~A~-~~~~~al~~~P~~ 118 (121)
T 1hxi_A 99 HNANAAL-ASLRAWLLSQPQY 118 (121)
T ss_dssp HHHHHHH-HHHHHHHC-----
T ss_pred CCHHHHH-HHHHHHHHhCcCC
Confidence 8877665 4588888777654
No 122
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.32 E-value=2.4e-11 Score=104.97 Aligned_cols=152 Identities=12% Similarity=-0.035 Sum_probs=108.0
Q ss_pred HhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhh--------hhh-hhHHH---HHHHh--------hchhhhHHHHHH
Q 017811 184 RRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMF--------QLF-GKYRD---MALAV--------KNPCHLNMAACL 243 (365)
Q Consensus 184 ~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~--------~~~-~~~~~---~~~~~--------~~~~~~nla~~~ 243 (365)
.+...|..++..|++.+|+..|.+++...|.+... ... +...+ ..... ...++.++|.++
T Consensus 44 ~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~ 123 (225)
T 2vq2_A 44 AWLVRAEIYQYLKVNDKAQESFRQALSIKPDSAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANLNKGICS 123 (225)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcchHHHHHHHHHHH
Confidence 34455666666666666666666666665543220 001 11111 11111 134689999999
Q ss_pred HHhcCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC-CcHHHHHHHHHHHHHHHHHHHHHH
Q 017811 244 LKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAP-EDKSIARELRLLAEHEKAVYKKQK 322 (365)
Q Consensus 244 ~kl~~~~~A~~~~~~aL~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P-~n~~~~~~l~~l~~~~~~~~~~~k 322 (365)
..+|++++|+..+.++++.+|.+..+++.+|.++..+|++++|+..|++++.++| .+..+...+..+....+... ...
T Consensus 124 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~a~ 202 (225)
T 2vq2_A 124 AKQGQFGLAEAYLKRSLAAQPQFPPAFKELARTKMLAGQLGDADYYFKKYQSRVEVLQADDLLLGWKIAKALGNAQ-AAY 202 (225)
T ss_dssp HHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHH-HHH
T ss_pred HHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcCcHH-HHH
Confidence 9999999999999999999999999999999999999999999999999999999 99888877777765555443 455
Q ss_pred HHHhcccCCCCCcc
Q 017811 323 EIYKGIFGPRPEPK 336 (365)
Q Consensus 323 ~~y~kmf~~~~~~~ 336 (365)
..++.+....|+..
T Consensus 203 ~~~~~~~~~~p~~~ 216 (225)
T 2vq2_A 203 EYEAQLQANFPYSE 216 (225)
T ss_dssp HHHHHHHHHCTTCH
T ss_pred HHHHHHHHhCCCCH
Confidence 55666655555443
No 123
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.32 E-value=1.3e-11 Score=109.31 Aligned_cols=137 Identities=18% Similarity=0.150 Sum_probs=121.2
Q ss_pred HHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHH
Q 017811 181 AADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVL 260 (365)
Q Consensus 181 ~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL 260 (365)
.+..+...|..++..|+|.+|+..|.+++...|.+.. ++.++|.+|...|++++|+..+.+++
T Consensus 36 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~-----------------~~~~la~~~~~~~~~~~A~~~~~~a~ 98 (252)
T 2ho1_A 36 ARDAYIQLGLGYLQRGNTEQAKVPLRKALEIDPSSAD-----------------AHAALAVVFQTEMEPKLADEEYRKAL 98 (252)
T ss_dssp HHHHHHHHHHHHHHTTCTGGGHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHHHHhcCCChHH-----------------HHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 4788999999999999999999999999999887533 48999999999999999999999999
Q ss_pred hCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHh--hCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCc
Q 017811 261 GEDENNVKALFRRGKARAELGQTDAAREDFLKAGK--FAPEDKSIARELRLLAEHEKAVYKKQKEIYKGIFGPRPEP 335 (365)
Q Consensus 261 ~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~--l~P~n~~~~~~l~~l~~~~~~~~~~~k~~y~kmf~~~~~~ 335 (365)
.++|.+..+++.+|.++..+|++++|+..|++++. ..|.+..+...+..+....++..+. ...|.+++...+..
T Consensus 99 ~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A-~~~~~~~~~~~~~~ 174 (252)
T 2ho1_A 99 ASDSRNARVLNNYGGFLYEQKRYEEAYQRLLEASQDTLYPERSRVFENLGLVSLQMKKPAQA-KEYFEKSLRLNRNQ 174 (252)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHTTCHHHH-HHHHHHHHHHCSCC
T ss_pred HHCcCcHHHHHHHHHHHHHHhHHHHHHHHHHHHHhCccCcccHHHHHHHHHHHHHcCCHHHH-HHHHHHHHhcCccc
Confidence 99999999999999999999999999999999999 8899999999998887777666544 44577777665543
No 124
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.32 E-value=1e-11 Score=116.10 Aligned_cols=133 Identities=13% Similarity=0.105 Sum_probs=103.1
Q ss_pred hhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHhCCCC
Q 017811 186 KMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGEDEN 265 (365)
Q Consensus 186 k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~~~p~ 265 (365)
...|..+ ..|++.+|+..|.+++...|.... ..++.++|.+|...|++++|+..+++++.++|.
T Consensus 186 ~~~~~~~-~~~~~~~A~~~~~~a~~~~p~~~~---------------~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~ 249 (368)
T 1fch_A 186 RILGSLL-SDSLFLEVKELFLAAVRLDPTSID---------------PDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPN 249 (368)
T ss_dssp CTTHHHH-HHHHHHHHHHHHHHHHHHSTTSCC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHh-hcccHHHHHHHHHHHHHhCcCccc---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcC
Confidence 3445444 888888888888888888887211 124788888888888888888888888888888
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCc
Q 017811 266 NVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEIYKGIFGPRPEP 335 (365)
Q Consensus 266 n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~~~~~~~~~k~~y~kmf~~~~~~ 335 (365)
++.+++.+|.++..+|++++|+..|++++.++|++..+...++.+....++..++. ..|.+++...|..
T Consensus 250 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~-~~~~~al~~~~~~ 318 (368)
T 1fch_A 250 DYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGISCINLGAHREAV-EHFLEALNMQRKS 318 (368)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHH-HHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHH-HHHHHHHHhCCCC
Confidence 88888888888888888888888888888888888888888888877777665544 4467666554443
No 125
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.32 E-value=1.2e-11 Score=113.28 Aligned_cols=145 Identities=14% Similarity=0.020 Sum_probs=112.3
Q ss_pred HHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHh-cCHHHHHHHHHHH
Q 017811 181 AADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKL-KRYEEAIGQCSLV 259 (365)
Q Consensus 181 ~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl-~~~~~A~~~~~~a 259 (365)
.+..+...|+.+...|+|++|+.+|++|+.+.+..... .....++.|+|.+|... |++++|+.+|+++
T Consensus 76 ~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~-----------~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~A 144 (292)
T 1qqe_A 76 AGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQF-----------RRGANFKFELGEILENDLHDYAKAIDCYELA 144 (292)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH-----------HHHHHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCH-----------HHHHHHHHHHHHHHHHhhcCHHHHHHHHHHH
Confidence 46677888899999999999999999999887653211 01234689999999995 9999999999999
Q ss_pred HhCCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHH-------HHHHHHHHHHHHHHHHHHHHHHHh
Q 017811 260 LGEDENN------VKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKS-------IARELRLLAEHEKAVYKKQKEIYK 326 (365)
Q Consensus 260 L~~~p~n------~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~-------~~~~l~~l~~~~~~~~~~~k~~y~ 326 (365)
|++.|.+ ..++.++|.++..+|+|++|+..|++++.+.|++.. +...+..|....++..++. ..|.
T Consensus 145 l~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~-~~~~ 223 (292)
T 1qqe_A 145 GEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAATDAVAAA-RTLQ 223 (292)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTTGGGHHHHHHHHHHHHHHTTCHHHHH-HHHH
T ss_pred HHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHcCCHHHHH-HHHH
Confidence 9998754 578999999999999999999999999999998654 3456677777666665554 4599
Q ss_pred cccCCCCCccc
Q 017811 327 GIFGPRPEPKQ 337 (365)
Q Consensus 327 kmf~~~~~~~~ 337 (365)
+.+...|....
T Consensus 224 ~al~l~p~~~~ 234 (292)
T 1qqe_A 224 EGQSEDPNFAD 234 (292)
T ss_dssp GGGCC------
T ss_pred HHHhhCCCCCC
Confidence 99887776443
No 126
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.32 E-value=2.2e-11 Score=95.13 Aligned_cols=99 Identities=16% Similarity=0.218 Sum_probs=85.8
Q ss_pred HHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Q 017811 200 EAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAE 279 (365)
Q Consensus 200 ~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~~~p~n~ka~~~~g~a~~~ 279 (365)
.|+..|.+++...|.+.. +++++|.+|+.+|+|++|+..|++++.++|.+..+++.+|.+|..
T Consensus 3 ~a~~~~~~al~~~p~~~~-----------------~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~ 65 (115)
T 2kat_A 3 AITERLEAMLAQGTDNML-----------------LRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQG 65 (115)
T ss_dssp CHHHHHHHHHTTTCCCHH-----------------HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCcHH-----------------HHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHH
Confidence 588999999999998643 499999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHHHhhCCC--cHHHHHHHHHHHHHHH
Q 017811 280 LGQTDAAREDFLKAGKFAPE--DKSIARELRLLAEHEK 315 (365)
Q Consensus 280 l~~~~~A~~~l~~al~l~P~--n~~~~~~l~~l~~~~~ 315 (365)
+|++++|+..|++++.++|. +......+..+...+.
T Consensus 66 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~l~~~l~~l~ 103 (115)
T 2kat_A 66 QGDRAGARQAWESGLAAAQSRGDQQVVKELQVFLRRLA 103 (115)
T ss_dssp HTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHhc
Confidence 99999999999999999985 4455555544444333
No 127
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.31 E-value=1.2e-11 Score=115.66 Aligned_cols=134 Identities=15% Similarity=0.098 Sum_probs=111.1
Q ss_pred HHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHhC
Q 017811 183 DRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGE 262 (365)
Q Consensus 183 ~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~~ 262 (365)
..+...|..++..|+|.+|+..|.+++...|.+.. +++++|.||..+|++++|+..+.+++.+
T Consensus 65 ~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~-----------------~~~~l~~~~~~~g~~~~A~~~~~~al~~ 127 (368)
T 1fch_A 65 PQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPKHME-----------------AWQYLGTTQAENEQELLAISALRRCLEL 127 (368)
T ss_dssp SSHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHH-----------------HHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHH-----------------HHHHHHHHHHHCcCHHHHHHHHHHHHhc
Confidence 44677899999999999999999999999887643 4899999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHH----------------HHHHHHHHHHHHHHHHHHHHh
Q 017811 263 DENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIAR----------------ELRLLAEHEKAVYKKQKEIYK 326 (365)
Q Consensus 263 ~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~----------------~l~~l~~~~~~~~~~~k~~y~ 326 (365)
+|.+..+++.+|.++..+|++++|+..|++++.++|++..+.. .+..+. ..++. ......|.
T Consensus 128 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~A~~~~~ 205 (368)
T 1fch_A 128 KPDNQTALMALAVSFTNESLQRQACEILRDWLRYTPAYAHLVTPAEEGAGGAGLGPSKRILGSLL-SDSLF-LEVKELFL 205 (368)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSTTTGGGCC---------------CTTHHHH-HHHHH-HHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHHHHHHHHhhhhcccHHHHHHHHHh-hcccH-HHHHHHHH
Confidence 9999999999999999999999999999999999998765543 244443 33333 34455577
Q ss_pred cccCCCCCc
Q 017811 327 GIFGPRPEP 335 (365)
Q Consensus 327 kmf~~~~~~ 335 (365)
+++...|..
T Consensus 206 ~a~~~~p~~ 214 (368)
T 1fch_A 206 AAVRLDPTS 214 (368)
T ss_dssp HHHHHSTTS
T ss_pred HHHHhCcCc
Confidence 777666653
No 128
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.31 E-value=1.2e-11 Score=110.69 Aligned_cols=137 Identities=12% Similarity=-0.035 Sum_probs=116.7
Q ss_pred hhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHhCCCCC
Q 017811 187 MDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGEDENN 266 (365)
Q Consensus 187 ~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~~~p~n 266 (365)
..+..+...++|++|+..|.+++...+.+.. ....+++++|.++..+|++++|+..+.+++.++|.+
T Consensus 10 ~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~-------------~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~ 76 (275)
T 1xnf_A 10 VLAVPLQPTLQQEVILARMEQILASRALTDD-------------ERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDM 76 (275)
T ss_dssp GSCCCCCCCHHHHHHHHHHHHHHTSSCCCHH-------------HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCC
T ss_pred ceeeccCccchHHHHHHHHHHHHhcccccCc-------------hhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCc
Confidence 4455667789999999999999997543211 123469999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCccc
Q 017811 267 VKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEIYKGIFGPRPEPKQ 337 (365)
Q Consensus 267 ~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~~~~~~~~~k~~y~kmf~~~~~~~~ 337 (365)
+.+++.+|.++..+|++++|+..|++++.++|++..+...++.+....++..+. ...|.+++...|....
T Consensus 77 ~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~g~~~~A-~~~~~~a~~~~~~~~~ 146 (275)
T 1xnf_A 77 PEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLA-QDDLLAFYQDDPNDPF 146 (275)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHH-HHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhcCccccHHHHHHHHHHHHhccHHHH-HHHHHHHHHhCCCChH
Confidence 999999999999999999999999999999999999999999998887776654 4558888877776553
No 129
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.31 E-value=1e-11 Score=113.80 Aligned_cols=139 Identities=14% Similarity=0.079 Sum_probs=113.1
Q ss_pred HHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHh
Q 017811 182 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLG 261 (365)
Q Consensus 182 a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~ 261 (365)
...+...|..++..|++++|+..|++++...|.+.. +++++|.+++.+|++++|+..+++++.
T Consensus 117 ~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~~-----------------a~~~la~~~~~~g~~~~A~~~l~~~~~ 179 (287)
T 3qou_A 117 EELXAQQAMQLMQESNYTDALPLLXDAWQLSNQNGE-----------------IGLLLAETLIALNRSEDAEAVLXTIPL 179 (287)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTSCHH-----------------HHHHHHHHHHHTTCHHHHHHHHTTSCG
T ss_pred hhhHHHHHHHHHhCCCHHHHHHHHHHHHHhCCcchh-----------------HHHHHHHHHHHCCCHHHHHHHHHhCch
Confidence 456788999999999999999999999999998754 489999999999999999999998888
Q ss_pred CCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCcccc
Q 017811 262 EDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEIYKGIFGPRPEPKQK 338 (365)
Q Consensus 262 ~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~~~~~~~~~k~~y~kmf~~~~~~~~~ 338 (365)
.+|++.-.++..+..+...+++++|+..|++++.++|++..++..++.+....++..++... |.+++...|+....
T Consensus 180 ~~p~~~~~~~~~~~~l~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~~~~A~~~-l~~~l~~~p~~~~~ 255 (287)
T 3qou_A 180 QDQDTRYQGLVAQIELLXQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALEL-LFGHLRXDLTAADG 255 (287)
T ss_dssp GGCSHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHH-HHHHHHHCTTGGGG
T ss_pred hhcchHHHHHHHHHHHHhhcccCccHHHHHHHHhcCCccHHHHHHHHHHHHHcccHHHHHHH-HHHHHhcccccccc
Confidence 88877777777777787888888888888888888888888888888777766666655544 77777777765433
No 130
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.31 E-value=2e-11 Score=107.38 Aligned_cols=139 Identities=10% Similarity=-0.045 Sum_probs=115.6
Q ss_pred HHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHH-----------------
Q 017811 183 DRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLK----------------- 245 (365)
Q Consensus 183 ~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~k----------------- 245 (365)
..+...|..+++.|+|.+|+..|+++++..|.+... ..+++++|.|+..
T Consensus 42 ~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~--------------~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~ 107 (225)
T 2yhc_A 42 QVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNI--------------DYVMYMRGLTNMALDDSALQGFFGVDRSDR 107 (225)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTH--------------HHHHHHHHHHHHHHHC--------------
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcH--------------HHHHHHHHHHHHhhhhhhhhhhhccchhhc
Confidence 457788999999999999999999999999986432 1247788888876
Q ss_pred -hcCHHHHHHHHHHHHhCCCCCHHHH-----------------HHHHHHHHHcCCHHHHHHHHHHHHhhCCCcH---HHH
Q 017811 246 -LKRYEEAIGQCSLVLGEDENNVKAL-----------------FRRGKARAELGQTDAAREDFLKAGKFAPEDK---SIA 304 (365)
Q Consensus 246 -l~~~~~A~~~~~~aL~~~p~n~ka~-----------------~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~---~~~ 304 (365)
+|++++|+..++++++.+|++..+. +.+|.+|...|+|++|+..|+++++..|+++ .+.
T Consensus 108 ~~~~~~~A~~~~~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~ 187 (225)
T 2yhc_A 108 DPQQARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDAL 187 (225)
T ss_dssp CCHHHHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTSHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHCcCCCccHHHH
Confidence 5799999999999999999987654 6789999999999999999999999999986 567
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccCCCCCcc
Q 017811 305 RELRLLAEHEKAVYKKQKEIYKGIFGPRPEPK 336 (365)
Q Consensus 305 ~~l~~l~~~~~~~~~~~k~~y~kmf~~~~~~~ 336 (365)
..+..+...+++..+.. ..++.+....|+..
T Consensus 188 ~~l~~~~~~~g~~~~A~-~~~~~l~~~~~~~~ 218 (225)
T 2yhc_A 188 PLMENAYRQMQMNAQAE-KVAKIIAANSSNTL 218 (225)
T ss_dssp HHHHHHHHHTTCHHHHH-HHHHHHHHCCSCCC
T ss_pred HHHHHHHHHcCCcHHHH-HHHHHHHhhCCCch
Confidence 77888887777776654 45777777666544
No 131
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.31 E-value=7.1e-12 Score=99.44 Aligned_cols=98 Identities=12% Similarity=-0.040 Sum_probs=90.1
Q ss_pred hhhhHHHHHHHHhcCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHH
Q 017811 234 PCHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEH 313 (365)
Q Consensus 234 ~~~~nla~~~~kl~~~~~A~~~~~~aL~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~ 313 (365)
..+.++|.++++.|+|++|+..|++++.++|+++.+++.+|.++..+|+|++|+.+|++++.++|++..+...++.+...
T Consensus 5 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~ 84 (126)
T 3upv_A 5 EEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIA 84 (126)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Confidence 35899999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHHhcccCCC
Q 017811 314 EKAVYKKQKEIYKGIFGPR 332 (365)
Q Consensus 314 ~~~~~~~~k~~y~kmf~~~ 332 (365)
.++..+.. ..|.+.+...
T Consensus 85 ~~~~~~A~-~~~~~al~~~ 102 (126)
T 3upv_A 85 VKEYASAL-ETLDAARTKD 102 (126)
T ss_dssp TTCHHHHH-HHHHHHHHHH
T ss_pred HhCHHHHH-HHHHHHHHhC
Confidence 88776554 4488887766
No 132
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.31 E-value=1e-11 Score=104.88 Aligned_cols=140 Identities=12% Similarity=0.051 Sum_probs=111.4
Q ss_pred HHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHhC
Q 017811 183 DRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGE 262 (365)
Q Consensus 183 ~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~~ 262 (365)
..+...|..++..|++.+|+..|++++...|.+.. +++++|.++..+|++++|+..+++++..
T Consensus 7 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~~-----------------a~~~la~~~~~~g~~~~A~~~~~~a~~~ 69 (176)
T 2r5s_A 7 EQLLKQVSELLQQGEHAQALNVIQTLSDELQSRGD-----------------VKLAKADCLLETKQFELAQELLATIPLE 69 (176)
T ss_dssp TTHHHHHHHHHHTTCHHHHHHHHHTSCHHHHTSHH-----------------HHHHHHHHHHHTTCHHHHHHHHTTCCGG
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHH-----------------HHHHHHHHHHHCCCHHHHHHHHHHhhhc
Confidence 34667889999999999999999999999998744 4899999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCccccchh
Q 017811 263 DENNVKALFRRGKARA-ELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEIYKGIFGPRPEPKQKKNW 341 (365)
Q Consensus 263 ~p~n~ka~~~~g~a~~-~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~~~~~~~~~k~~y~kmf~~~~~~~~~~~~ 341 (365)
+| ++..+..++.+.. ..+...+|+..|++++.++|++..++..++.+....++..+... .|.+++...|.......|
T Consensus 70 ~p-~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~-~~~~~l~~~p~~~~~~a~ 147 (176)
T 2r5s_A 70 YQ-DNSYKSLIAKLELHQQAAESPELKRLEQELAANPDNFELACELAVQYNQVGRDEEALE-LLWNILKVNLGAQDGEVK 147 (176)
T ss_dssp GC-CHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHH-HHHHHHTTCTTTTTTHHH
T ss_pred cC-ChHHHHHHHHHHHHhhcccchHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccHHHHHH-HHHHHHHhCcccChHHHH
Confidence 99 8776666664433 33344567899999999999999999999988877777665554 488888888765444333
No 133
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.30 E-value=4.5e-12 Score=101.59 Aligned_cols=100 Identities=10% Similarity=0.037 Sum_probs=84.6
Q ss_pred hhhhHHHHHHHHhcCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcH-------HHHHH
Q 017811 234 PCHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDK-------SIARE 306 (365)
Q Consensus 234 ~~~~nla~~~~kl~~~~~A~~~~~~aL~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~-------~~~~~ 306 (365)
.++.|+|.++++.|+|++|+.+|+++|+++|+++.+|+++|.+|..+|+|++|+.+|+++++++|++. .+...
T Consensus 9 ~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~ 88 (127)
T 4gcn_A 9 IAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIAKAMSR 88 (127)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHHHHHHH
Confidence 45889999999999999999999999999999999999999999999999999999999999998764 35556
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccCCCCC
Q 017811 307 LRLLAEHEKAVYKKQKEIYKGIFGPRPE 334 (365)
Q Consensus 307 l~~l~~~~~~~~~~~k~~y~kmf~~~~~ 334 (365)
++.+...++++.++. ..|.+.+...++
T Consensus 89 lg~~~~~~~~~~~A~-~~~~kal~~~~~ 115 (127)
T 4gcn_A 89 AGNAFQKQNDLSLAV-QWFHRSLSEFRD 115 (127)
T ss_dssp HHHHHHHTTCHHHHH-HHHHHHHHHSCC
T ss_pred HHHHHHHcCCHHHHH-HHHHHHHhhCcC
Confidence 677766666666554 447777765554
No 134
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.30 E-value=2.8e-11 Score=100.77 Aligned_cols=120 Identities=16% Similarity=0.036 Sum_probs=101.5
Q ss_pred chhhhHHHHHHHHhcCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHH
Q 017811 233 NPCHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAE 312 (365)
Q Consensus 233 ~~~~~nla~~~~kl~~~~~A~~~~~~aL~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~ 312 (365)
...++++|.++++.|+|++|+..|++++.++|.++.+|+.+|.+|..+|+|++|+.+|++++.++|++..+...++.+..
T Consensus 11 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~ 90 (164)
T 3sz7_A 11 SDKLKSEGNAAMARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLGLARF 90 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 34589999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHHHhcccCCCCCccccchhHHHHHHHHHHHHHH
Q 017811 313 HEKAVYKKQKEIYKGIFGPRPEPKQKKNWLIIFWQLLVSLVLG 355 (365)
Q Consensus 313 ~~~~~~~~~k~~y~kmf~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (365)
.++++.+... .|.+.+...|+... .|....+..+..-+..
T Consensus 91 ~~g~~~~A~~-~~~~al~~~p~~~~--~~~~~~l~~~~~~~~~ 130 (164)
T 3sz7_A 91 DMADYKGAKE-AYEKGIEAEGNGGS--DAMKRGLETTKRKIEE 130 (164)
T ss_dssp HTTCHHHHHH-HHHHHHHHHSSSCC--HHHHHHHHHHHHHHHH
T ss_pred HccCHHHHHH-HHHHHHHhCCCchH--HHHHHHHHHHHHHHHH
Confidence 8887766554 58888877776554 4444444444444433
No 135
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.30 E-value=2e-11 Score=111.92 Aligned_cols=148 Identities=12% Similarity=0.027 Sum_probs=118.0
Q ss_pred HHHHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHH
Q 017811 178 RIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCS 257 (365)
Q Consensus 178 ~~~~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~ 257 (365)
.-+.+..+...|+.+...|+|++|+..|.+|+.+.+..... .....+|.|+|.+|.++|+|++|+.+++
T Consensus 33 ~~~A~~~~~~a~~~~~~~g~~~~A~~~~~~al~~~~~~~~~-----------~~~a~~~~~lg~~~~~~g~~~~A~~~~~ 101 (292)
T 1qqe_A 33 FEEAADLCVQAATIYRLRKELNLAGDSFLKAADYQKKAGNE-----------DEAGNTYVEAYKCFKSGGNSVNAVDSLE 101 (292)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHHHTTCH-----------HHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCH-----------HHHHHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 44455666777888889999999999999999987542110 0124469999999999999999999999
Q ss_pred HHHhCCCCC------HHHHHHHHHHHHHc-CCHHHHHHHHHHHHhhCCCc------HHHHHHHHHHHHHHHHHHHHHHHH
Q 017811 258 LVLGEDENN------VKALFRRGKARAEL-GQTDAAREDFLKAGKFAPED------KSIARELRLLAEHEKAVYKKQKEI 324 (365)
Q Consensus 258 ~aL~~~p~n------~ka~~~~g~a~~~l-~~~~~A~~~l~~al~l~P~n------~~~~~~l~~l~~~~~~~~~~~k~~ 324 (365)
+++.+.|.. ..++.++|.+|... |++++|+..|++|+.+.|.+ ..+...++.+...++++.++. ..
T Consensus 102 ~Al~l~~~~g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~-~~ 180 (292)
T 1qqe_A 102 NAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEAS-DI 180 (292)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH-HH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHH-HH
Confidence 999988754 57999999999995 99999999999999998854 355667788877777776555 55
Q ss_pred HhcccCCCCCccc
Q 017811 325 YKGIFGPRPEPKQ 337 (365)
Q Consensus 325 y~kmf~~~~~~~~ 337 (365)
|.+.+...+....
T Consensus 181 ~~~al~~~~~~~~ 193 (292)
T 1qqe_A 181 YSKLIKSSMGNRL 193 (292)
T ss_dssp HHHHHHTTSSCTT
T ss_pred HHHHHHHHhcCCc
Confidence 8888877766544
No 136
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.29 E-value=2.5e-11 Score=118.32 Aligned_cols=107 Identities=21% Similarity=0.267 Sum_probs=99.7
Q ss_pred HHHHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHH
Q 017811 178 RIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCS 257 (365)
Q Consensus 178 ~~~~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~ 257 (365)
+.+.+..+...|+.+++.|+|.+|+..|++++...|+ . .+++++|.||+++|+|++|+..|+
T Consensus 2 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~-----------------~~~~~la~~~~~~g~~~~A~~~~~ 63 (514)
T 2gw1_A 2 KDKYALALKDKGNQFFRNKKYDDAIKYYNWALELKED-P-----------------VFYSNLSACYVSVGDLKKVVEMST 63 (514)
T ss_dssp HHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCCC-H-----------------HHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCcc-H-----------------HHHHhHHHHHHHHhhHHHHHHHHH
Confidence 4578899999999999999999999999999999874 2 249999999999999999999999
Q ss_pred HHHhCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHH
Q 017811 258 LVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKS 302 (365)
Q Consensus 258 ~aL~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~ 302 (365)
++++++|+++.+++.+|.++..+|++++|+..|++++.++|.+..
T Consensus 64 ~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~ 108 (514)
T 2gw1_A 64 KALELKPDYSKVLLRRASANEGLGKFADAMFDLSVLSLNGDFNDA 108 (514)
T ss_dssp HHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSSSCCGG
T ss_pred HHhccChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCccc
Confidence 999999999999999999999999999999999999999996543
No 137
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.29 E-value=3.3e-11 Score=110.39 Aligned_cols=152 Identities=9% Similarity=-0.002 Sum_probs=110.7
Q ss_pred HhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhh--------hhhHHHH---HH------HhhchhhhHHHHHHHHh
Q 017811 184 RRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQL--------FGKYRDM---AL------AVKNPCHLNMAACLLKL 246 (365)
Q Consensus 184 ~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~--------~~~~~~~---~~------~~~~~~~~nla~~~~kl 246 (365)
.+...|..++..|+|.+|+..|++++...|.+...-. .+...+. .. .-...+++++|.++..+
T Consensus 24 ~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 103 (330)
T 3hym_B 24 VVVSLAERHYYNCDFKMCYKLTSVVMEKDPFHASCLPVHIGTLVELNKANELFYLSHKLVDLYPSNPVSWFAVGCYYLMV 103 (330)
T ss_dssp THHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCChhhHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHh
Confidence 3455666777777777777777777777665432110 0000000 00 01134688899999999
Q ss_pred c-CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017811 247 K-RYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEIY 325 (365)
Q Consensus 247 ~-~~~~A~~~~~~aL~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~~~~~~~~~k~~y 325 (365)
| ++++|+..+.+++.++|.+..+++.+|.++..+|++++|+..|++++.+.|++..+...+..+....++..+. ...|
T Consensus 104 ~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A-~~~~ 182 (330)
T 3hym_B 104 GHKNEHARRYLSKATTLEKTYGPAWIAYGHSFAVESEHDQAMAAYFTAAQLMKGCHLPMLYIGLEYGLTNNSKLA-ERFF 182 (330)
T ss_dssp CSCHHHHHHHHHHHHTTCTTCTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCSHHHHHHHHHHHHTTCHHHH-HHHH
T ss_pred hhhHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHhhHHHH-HHHH
Confidence 9 8999999999999999999999999999999999999999999999999999888888888887777666544 4558
Q ss_pred hcccCCCCCcc
Q 017811 326 KGIFGPRPEPK 336 (365)
Q Consensus 326 ~kmf~~~~~~~ 336 (365)
.+++...|...
T Consensus 183 ~~al~~~~~~~ 193 (330)
T 3hym_B 183 SQALSIAPEDP 193 (330)
T ss_dssp HHHHTTCTTCH
T ss_pred HHHHHhCCCCh
Confidence 88888777543
No 138
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.25 E-value=6.8e-11 Score=108.12 Aligned_cols=119 Identities=16% Similarity=0.129 Sum_probs=83.4
Q ss_pred HhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHhCC
Q 017811 184 RRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGED 263 (365)
Q Consensus 184 ~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~~~ 263 (365)
.+...|..++..|++++|+..|.+++...|.+.. ++.++|.++..+|++++|+..+++++..+
T Consensus 174 ~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~-----------------~~~~l~~~~~~~~~~~~A~~~~~~a~~~~ 236 (327)
T 3cv0_A 174 LHASLGVLYNLSNNYDSAAANLRRAVELRPDDAQ-----------------LWNKLGATLANGNRPQEALDAYNRALDIN 236 (327)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHhCCCcHH-----------------HHHHHHHHHHHcCCHHHHHHHHHHHHHcC
Confidence 4455666777777777777777777777665422 36777777777777777777777777777
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC------------cHHHHHHHHHHHHHHHHHHH
Q 017811 264 ENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPE------------DKSIARELRLLAEHEKAVYK 319 (365)
Q Consensus 264 p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~------------n~~~~~~l~~l~~~~~~~~~ 319 (365)
|.+..+++.+|.++..+|++++|+..|++++.++|+ +..+...+..+....++..+
T Consensus 237 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~ 304 (327)
T 3cv0_A 237 PGYVRVMYNMAVSYSNMSQYDLAAKQLVRAIYMQVGGTTPTGEASREATRSMWDFFRMLLNVMNRPDL 304 (327)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCC-----CCTHHHHHHHHHHHHHHHTTCHHH
T ss_pred CCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccccccccchhhcCHHHHHHHHHHHHhcCCHHH
Confidence 777777777777777777777777777777777777 56666666666665555443
No 139
>1w26_A Trigger factor, TF; chaperone, protein folding, ribosome associated protein, nascent chain, cell division, isomerase; 2.7A {Escherichia coli} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 2vrh_A 1w2b_5
Probab=99.25 E-value=1.5e-11 Score=119.03 Aligned_cols=89 Identities=15% Similarity=0.241 Sum_probs=79.2
Q ss_pred CCCCCCCCEEEEEEEEEEcCCCeeeccCcCCCCcceeecCCCCchhhhHHHHHhcCCcCcEEEEEeccccccCCCCCCCC
Q 017811 64 GQKPSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSSMKAGEHALLHVGWELGYGKEGSFSF 143 (365)
Q Consensus 64 g~~p~~g~~v~v~y~~~~~~~g~~fd~s~~~~~p~~f~lg~~~~~i~g~e~~l~~Mk~GE~~~~~i~~~~~yg~~g~~~~ 143 (365)
+..+..||.|+|||+++. + |++||++. +.|+.|.+|.| ++|+||+.+|.+|++|++..|.||+..+||..+.
T Consensus 155 ~~~~~~gD~V~i~y~g~~-d-G~~fd~~~--~~~~~~~lG~g-~~ipgfee~L~G~k~Ge~~~v~v~~~~~yg~~~l--- 226 (432)
T 1w26_A 155 DGAVEAEDRVTIDFTGSV-D-GEEFEGGK--ASDFVLAMGQG-RMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENL--- 226 (432)
T ss_dssp SSCCCTTCEEEECEEEES-S-SCBCSSCC--CSSEEEETTSC-CSCTTHHHHSSSCCSSCEEEEEEECCTTCSCTTT---
T ss_pred CCCCCCCCEEEEEEEEee-C-CeEccCCC--ccceEEEeCCC-CcchHHHHHhCCCCCCCEEEEEECCchhhCCCCC---
Confidence 446889999999999994 5 99999986 67999999999 8999999999999999999999999999997542
Q ss_pred CCCCCCCcEEEEEEEEeeecC
Q 017811 144 PNVSPMADLVYEVVLIGFDET 164 (365)
Q Consensus 144 ~~ip~~~~l~~~iel~~~~~~ 164 (365)
+|.++.|.|+++++...
T Consensus 227 ----ag~~~~F~V~v~~v~~~ 243 (432)
T 1w26_A 227 ----KGKAAKFAINLKKVEER 243 (432)
T ss_dssp ----SSCEEEEEEECCEECCE
T ss_pred ----CCceEEEEEEEEEEecc
Confidence 67899999999988754
No 140
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.25 E-value=2.3e-11 Score=121.81 Aligned_cols=125 Identities=19% Similarity=0.115 Sum_probs=95.2
Q ss_pred hhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHhCCCCCHHHHHHHH
Q 017811 195 EEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRG 274 (365)
Q Consensus 195 ~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~~~p~n~ka~~~~g 274 (365)
.|++++|+..|++++...|.+.. +++++|.+|..+|+|++|+..++++++++|++..+++.+|
T Consensus 2 ~g~~~~A~~~~~~al~~~p~~~~-----------------~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg 64 (568)
T 2vsy_A 2 TADGPRELLQLRAAVRHRPQDFV-----------------AWLMLADAELGMGDTTAGEMAVQRGLALHPGHPEAVARLG 64 (568)
T ss_dssp -------------------CCHH-----------------HHHHHHHHHHHHTCHHHHHHHHHHHHTTSTTCHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHhCCCCHH-----------------HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 47899999999999999988643 4999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCccc
Q 017811 275 KARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEIYKGIFGPRPEPKQ 337 (365)
Q Consensus 275 ~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~~~~~~~~~k~~y~kmf~~~~~~~~ 337 (365)
.+|..+|++++|+..|+++++++|++..+...++.+....++..++. ..|.+.+...|+...
T Consensus 65 ~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~-~~~~~al~~~p~~~~ 126 (568)
T 2vsy_A 65 RVRWTQQRHAEAAVLLQQASDAAPEHPGIALWLGHALEDAGQAEAAA-AAYTRAHQLLPEEPY 126 (568)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHH-HHHHHHHHHCTTCHH
T ss_pred HHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHH-HHHHHHHHhCCCCHH
Confidence 99999999999999999999999999999999999988887776554 558888877775543
No 141
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.24 E-value=3.8e-12 Score=119.47 Aligned_cols=127 Identities=13% Similarity=0.079 Sum_probs=111.4
Q ss_pred hhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHhCCCCC-------
Q 017811 194 KEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGEDENN------- 266 (365)
Q Consensus 194 ~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~~~p~n------- 266 (365)
..++|.+|+..|.+++...|.. ..++.++|.+|+++|+|++|+..|++++.++|.+
T Consensus 125 ~L~~~~~A~~~~~~a~~~~p~~-----------------a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~ 187 (336)
T 1p5q_A 125 HLKSFEKAKESWEMNSEEKLEQ-----------------STIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEE 187 (336)
T ss_dssp EEEEEECCCCGGGCCHHHHHHH-----------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHH
T ss_pred EEeecccccchhcCCHHHHHHH-----------------HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHH
Confidence 4567778888888888776653 3359999999999999999999999999999999
Q ss_pred --------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCcccc
Q 017811 267 --------VKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEIYKGIFGPRPEPKQK 338 (365)
Q Consensus 267 --------~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~~~~~~~~~k~~y~kmf~~~~~~~~~ 338 (365)
..+|+++|.+|..+|+|++|+..|++++.++|++..+...++.+...++++.++. ..|.+.+...|.....
T Consensus 188 ~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~-~~~~~al~l~P~~~~a 266 (336)
T 1p5q_A 188 AQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELAR-ADFQKVLQLYPNNKAA 266 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHH-HHHHHHHHHCSSCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHCCCCHHH
Confidence 7999999999999999999999999999999999999999999988888776654 5599998888876654
No 142
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.21 E-value=1.6e-10 Score=90.87 Aligned_cols=101 Identities=26% Similarity=0.325 Sum_probs=92.7
Q ss_pred HHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHhC
Q 017811 183 DRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGE 262 (365)
Q Consensus 183 ~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~~ 262 (365)
..+...|..++..|++.+|+..|.+++...|.+.. +++++|.++...|++++|+..+.+++..
T Consensus 36 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~-----------------~~~~l~~~~~~~~~~~~A~~~~~~~~~~ 98 (136)
T 2fo7_A 36 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAE-----------------AWYNLGNAYYKQGDYDEAIEYYQKALEL 98 (136)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchH-----------------HHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 34566888999999999999999999999876532 4889999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCc
Q 017811 263 DENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPED 300 (365)
Q Consensus 263 ~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n 300 (365)
.|.+..+++.+|.++..+|++++|...|++++.++|++
T Consensus 99 ~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~ 136 (136)
T 2fo7_A 99 DPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRS 136 (136)
T ss_dssp CTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHSTTC
T ss_pred CCCChHHHHHHHHHHHHHccHHHHHHHHHHHHccCCCC
Confidence 99999999999999999999999999999999999864
No 143
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.21 E-value=7.8e-11 Score=107.70 Aligned_cols=126 Identities=9% Similarity=0.032 Sum_probs=113.2
Q ss_pred hhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHhCCCCCHHHH
Q 017811 191 ALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKAL 270 (365)
Q Consensus 191 ~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~~~p~n~ka~ 270 (365)
.+...|++.+|+..|.+++...|.+.. ++.++|.++..+|++++|+..+.+++..+|.+..++
T Consensus 147 ~~~~~~~~~~A~~~~~~~~~~~~~~~~-----------------~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 209 (327)
T 3cv0_A 147 FFAAPNEYRECRTLLHAALEMNPNDAQ-----------------LHASLGVLYNLSNNYDSAAANLRRAVELRPDDAQLW 209 (327)
T ss_dssp CTTSHHHHHHHHHHHHHHHHHSTTCHH-----------------HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHcccHHHHHHHHHHHHhhCCCCHH-----------------HHHHHHHHHHHhccHHHHHHHHHHHHHhCCCcHHHH
Confidence 588999999999999999999887533 489999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCC
Q 017811 271 FRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEIYKGIFGPRPE 334 (365)
Q Consensus 271 ~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~~~~~~~~~k~~y~kmf~~~~~ 334 (365)
+.+|.++..+|++++|+..|++++.++|++..+...+..+....++..++. ..|.+++...|.
T Consensus 210 ~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~g~~~~A~-~~~~~a~~~~~~ 272 (327)
T 3cv0_A 210 NKLGATLANGNRPQEALDAYNRALDINPGYVRVMYNMAVSYSNMSQYDLAA-KQLVRAIYMQVG 272 (327)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHH-HHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhccHHHHH-HHHHHHHHhCCc
Confidence 999999999999999999999999999999999999999988777766554 447777666555
No 144
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.20 E-value=7.2e-11 Score=94.43 Aligned_cols=100 Identities=11% Similarity=-0.007 Sum_probs=90.9
Q ss_pred hhhhHHHHHHHHhcCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHH
Q 017811 234 PCHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEH 313 (365)
Q Consensus 234 ~~~~nla~~~~kl~~~~~A~~~~~~aL~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~ 313 (365)
..++++|.+++..|+|++|+..+.+++.++|.++.+++.+|.++..+|+|++|+..|++++.++|++..+...++.+...
T Consensus 10 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 89 (137)
T 3q49_B 10 QELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQLE 89 (137)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHHHHHHHHH
Confidence 45899999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHHhcccCCCCC
Q 017811 314 EKAVYKKQKEIYKGIFGPRPE 334 (365)
Q Consensus 314 ~~~~~~~~k~~y~kmf~~~~~ 334 (365)
.++..+.. ..|.+.+...|+
T Consensus 90 ~~~~~~A~-~~~~~a~~~~p~ 109 (137)
T 3q49_B 90 MESYDEAI-ANLQRAYSLAKE 109 (137)
T ss_dssp TTCHHHHH-HHHHHHHHHHHH
T ss_pred HhhHHHHH-HHHHHHHHHChh
Confidence 87776554 458877766554
No 145
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.19 E-value=1.1e-10 Score=104.01 Aligned_cols=141 Identities=16% Similarity=0.109 Sum_probs=113.9
Q ss_pred HHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHH
Q 017811 180 GAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLV 259 (365)
Q Consensus 180 ~~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~a 259 (365)
..+..+...|..++..|+|.+|+..|.+++.+....... . ......++.++|.+|..+|++++|+.++.++
T Consensus 41 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~---~------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 111 (283)
T 3edt_B 41 DVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGK---D------HPAVAATLNNLAVLYGKRGKYKEAEPLCKRA 111 (283)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCT---T------CHHHHHHHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCC---c------chHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 456678889999999999999999999999986211000 0 0112446999999999999999999999999
Q ss_pred HhC--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh--------CCCcHHHHHHHHHHHHHHHHHHHHHHH
Q 017811 260 LGE--------DENNVKALFRRGKARAELGQTDAAREDFLKAGKF--------APEDKSIARELRLLAEHEKAVYKKQKE 323 (365)
Q Consensus 260 L~~--------~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l--------~P~n~~~~~~l~~l~~~~~~~~~~~k~ 323 (365)
+.+ +|....+++.+|.++..+|++++|+..|++++.+ +|....+...++.+....++..++. .
T Consensus 112 l~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~-~ 190 (283)
T 3edt_B 112 LEIREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAE-T 190 (283)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTCHHHHH-H
T ss_pred HHHHHHHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHH-H
Confidence 988 5778899999999999999999999999999999 7777788888888887777665544 3
Q ss_pred HHhcccC
Q 017811 324 IYKGIFG 330 (365)
Q Consensus 324 ~y~kmf~ 330 (365)
.|.+++.
T Consensus 191 ~~~~~l~ 197 (283)
T 3edt_B 191 LYKEILT 197 (283)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 3555543
No 146
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.19 E-value=1.6e-10 Score=88.73 Aligned_cols=81 Identities=15% Similarity=0.146 Sum_probs=72.6
Q ss_pred hhhhHHHHHHHHhcCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCc------HHHHHHH
Q 017811 234 PCHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPED------KSIAREL 307 (365)
Q Consensus 234 ~~~~nla~~~~kl~~~~~A~~~~~~aL~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n------~~~~~~l 307 (365)
.+++++|.+++..|+|++|+..+++++.++|.++.+++++|.++..+|+|++|+..|++++.++|++ ..+...+
T Consensus 5 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~ 84 (111)
T 2l6j_A 5 EKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQYRL 84 (111)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHHHHHHH
Confidence 3589999999999999999999999999999999999999999999999999999999999999998 5555555
Q ss_pred HHHHHHH
Q 017811 308 RLLAEHE 314 (365)
Q Consensus 308 ~~l~~~~ 314 (365)
+.+....
T Consensus 85 ~~~~~~~ 91 (111)
T 2l6j_A 85 ELAQGAV 91 (111)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5554433
No 147
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.19 E-value=2.1e-10 Score=105.22 Aligned_cols=97 Identities=18% Similarity=0.164 Sum_probs=88.6
Q ss_pred hhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHhCCCCCHHHHHH
Q 017811 193 FKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFR 272 (365)
Q Consensus 193 ~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~~~p~n~ka~~~ 272 (365)
...|++++|+..|++++...|.+.. +++++|.|++++|+|++|+..++++|.++|+++.++++
T Consensus 177 ~~~~~~~eA~~~~~~~l~~~p~~~~-----------------~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~ 239 (291)
T 3mkr_A 177 AGGEKLQDAYYIFQEMADKCSPTLL-----------------LLNGQAACHMAQGRWEAAEGVLQEALDKDSGHPETLIN 239 (291)
T ss_dssp HCTTHHHHHHHHHHHHHHHSCCCHH-----------------HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred hCchHHHHHHHHHHHHHHhCCCcHH-----------------HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 3458999999999999999988643 49999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCHHH-HHHHHHHHHhhCCCcHHHHHH
Q 017811 273 RGKARAELGQTDA-AREDFLKAGKFAPEDKSIARE 306 (365)
Q Consensus 273 ~g~a~~~l~~~~~-A~~~l~~al~l~P~n~~~~~~ 306 (365)
+|.++..+|++++ |...++++++++|+++.+...
T Consensus 240 l~~~~~~~g~~~eaa~~~~~~~~~~~P~~~~~~d~ 274 (291)
T 3mkr_A 240 LVVLSQHLGKPPEVTNRYLSQLKDAHRSHPFIKEY 274 (291)
T ss_dssp HHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHhCCCChHHHHH
Confidence 9999999999987 568889999999999987653
No 148
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.19 E-value=1.2e-10 Score=114.37 Aligned_cols=158 Identities=11% Similarity=-0.002 Sum_probs=117.4
Q ss_pred HHHHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhh-hh----------hhhHHHHHH---H---hhchhhhHHH
Q 017811 178 RIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMF-QL----------FGKYRDMAL---A---VKNPCHLNMA 240 (365)
Q Consensus 178 ~~~~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~-~~----------~~~~~~~~~---~---~~~~~~~nla 240 (365)
....+..+...|..++..|++.+|+..|.+++...|. ... .. .++-..... . -...++.++|
T Consensus 239 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~ 317 (537)
T 3fp2_A 239 RENAALALCYTGIFHFLKNNLLDAQVLLQESINLHPT-PNSYIFLALTLADKENSQEFFKFFQKAVDLNPEYPPTYYHRG 317 (537)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHTCCSSCCHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHhcCCC-chHHHHHHHHHHHhcCHHHHHHHHHHHhccCCCCHHHHHHHH
Confidence 3445667888899999999999999999999998886 221 00 000011111 1 1135688889
Q ss_pred HHHHHhcCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHH
Q 017811 241 ACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKK 320 (365)
Q Consensus 241 ~~~~kl~~~~~A~~~~~~aL~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~~~~~~~~ 320 (365)
.++..+|++++|+..+++++.++|.+..+++.+|.++..+|++++|+..|++++.++|++..+...++.+....++..++
T Consensus 318 ~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A 397 (537)
T 3fp2_A 318 QMYFILQDYKNAKEDFQKAQSLNPENVYPYIQLACLLYKQGKFTESEAFFNETKLKFPTLPEVPTFFAEILTDRGDFDTA 397 (537)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHH
Confidence 99999999999999999999999988889999999999999999999999999999998888888888887777666544
Q ss_pred HHHHHhcccCCCCCccc
Q 017811 321 QKEIYKGIFGPRPEPKQ 337 (365)
Q Consensus 321 ~k~~y~kmf~~~~~~~~ 337 (365)
. ..|.+++...|....
T Consensus 398 ~-~~~~~a~~~~~~~~~ 413 (537)
T 3fp2_A 398 I-KQYDIAKRLEEVQEK 413 (537)
T ss_dssp H-HHHHHHHHHHHHCSS
T ss_pred H-HHHHHHHHcCCcchh
Confidence 4 447777665554433
No 149
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.18 E-value=2.5e-10 Score=84.33 Aligned_cols=80 Identities=26% Similarity=0.324 Sum_probs=75.3
Q ss_pred hhhhHHHHHHHHhcCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHH
Q 017811 234 PCHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEH 313 (365)
Q Consensus 234 ~~~~nla~~~~kl~~~~~A~~~~~~aL~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~ 313 (365)
.+++++|.++...++|++|+..+.+++.++|.+..+++.+|.++..+|++++|+..|++++.++|++..+...+..+...
T Consensus 10 ~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~ 89 (91)
T 1na3_A 10 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQK 89 (91)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHh
Confidence 45899999999999999999999999999999999999999999999999999999999999999999999888877543
No 150
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.18 E-value=9.4e-11 Score=97.26 Aligned_cols=102 Identities=18% Similarity=0.090 Sum_probs=91.8
Q ss_pred chhhhHHHHHHHHhcCHHHHHHHHHHHHhCCCC-------CHH-----HHHHHHHHHHHcCCHHHHHHHHHHHHhh----
Q 017811 233 NPCHLNMAACLLKLKRYEEAIGQCSLVLGEDEN-------NVK-----ALFRRGKARAELGQTDAAREDFLKAGKF---- 296 (365)
Q Consensus 233 ~~~~~nla~~~~kl~~~~~A~~~~~~aL~~~p~-------n~k-----a~~~~g~a~~~l~~~~~A~~~l~~al~l---- 296 (365)
...+.++|.+++++|+|++|+..|+++|+++|+ +.. +|+++|.++..+|+|++|+.+|.+||++
T Consensus 11 a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~ 90 (159)
T 2hr2_A 11 AYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRR 90 (159)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhcc
Confidence 345899999999999999999999999999999 555 9999999999999999999999999999
Q ss_pred ---CCCcHHHH----HHHHHHHHHHHHHHHHHHHHHhcccCCCCCc
Q 017811 297 ---APEDKSIA----RELRLLAEHEKAVYKKQKEIYKGIFGPRPEP 335 (365)
Q Consensus 297 ---~P~n~~~~----~~l~~l~~~~~~~~~~~k~~y~kmf~~~~~~ 335 (365)
+|++..++ ..++.+...++++.++... |.+.+...|..
T Consensus 91 ~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~-y~kAlel~p~d 135 (159)
T 2hr2_A 91 GELNQDEGKLWISAVYSRALALDGLGRGAEAMPE-FKKVVEMIEER 135 (159)
T ss_dssp CCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHH-HHHHHHHHHHC
T ss_pred ccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHH-HHHHHhcCCCc
Confidence 99999999 9999999999888877766 88887666543
No 151
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.17 E-value=9.9e-11 Score=113.46 Aligned_cols=148 Identities=14% Similarity=0.025 Sum_probs=109.3
Q ss_pred HHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHh
Q 017811 182 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLG 261 (365)
Q Consensus 182 a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~ 261 (365)
+..+...|..++..|+|++|+..|++|+++.+........ .-...+|.|+|.+|..+|+|++|+.++++++.
T Consensus 51 a~~yn~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~~--------~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~ 122 (472)
T 4g1t_A 51 ATMCNLLAYLKHLKGQNEAALECLRKAEELIQQEHADQAE--------IRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKH 122 (472)
T ss_dssp CHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSGGGCT--------TTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCccccc--------hHHHHHHHHHHHHHHHcCChHHHHHHHHHHHH
Confidence 4456778999999999999999999999986542211000 00133588999999999999999999999987
Q ss_pred C--------CCCCHHHHHHHHHHHHHcC--CHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHH--HHHHHHhccc
Q 017811 262 E--------DENNVKALFRRGKARAELG--QTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYK--KQKEIYKGIF 329 (365)
Q Consensus 262 ~--------~p~n~ka~~~~g~a~~~l~--~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~~~~~~~--~~k~~y~kmf 329 (365)
+ .+..+.++..+|.++..++ +|++|+..|++|++++|+++.+...+..+........+ +.-..|++.+
T Consensus 123 i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~~~~~~~~~~~~~~~l~~~~~~~~al~~~~~al 202 (472)
T 4g1t_A 123 VCEKFSSPYRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKNPEFTSGLAIASYRLDNWPPSQNAIDPLRQAI 202 (472)
T ss_dssp HHHHSCCSSCCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHSCCCCCTHHHHHHHH
T ss_pred HhHhcccccchhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCchHHHHHHHHHHHHh
Confidence 6 3456789999998887765 69999999999999999999998888877555443221 1223455555
Q ss_pred CCCCCccc
Q 017811 330 GPRPEPKQ 337 (365)
Q Consensus 330 ~~~~~~~~ 337 (365)
...|....
T Consensus 203 ~l~p~~~~ 210 (472)
T 4g1t_A 203 RLNPDNQY 210 (472)
T ss_dssp HHCSSCHH
T ss_pred hcCCcchH
Confidence 55554443
No 152
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.15 E-value=1.5e-10 Score=88.46 Aligned_cols=101 Identities=11% Similarity=-0.037 Sum_probs=90.0
Q ss_pred hhhhHHHHHHHHhcCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC--cHHHHHHHHHHH
Q 017811 234 PCHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPE--DKSIARELRLLA 311 (365)
Q Consensus 234 ~~~~nla~~~~kl~~~~~A~~~~~~aL~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~--n~~~~~~l~~l~ 311 (365)
.+++++|.++...|++++|+..+++++.++|.+..+++.+|.++..+|++++|+..|+++++++|+ +..+...+..+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~l~~~~ 86 (112)
T 2kck_A 7 EEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAAKADAL 86 (112)
T ss_dssp TGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHHHHHHHH
Confidence 358999999999999999999999999999999999999999999999999999999999999999 999999999988
Q ss_pred HHH-HHHHHHHHHHHhcccCCCCCc
Q 017811 312 EHE-KAVYKKQKEIYKGIFGPRPEP 335 (365)
Q Consensus 312 ~~~-~~~~~~~k~~y~kmf~~~~~~ 335 (365)
... ++..+ ..+.+.+.....|..
T Consensus 87 ~~~~~~~~~-A~~~~~~~~~~~p~~ 110 (112)
T 2kck_A 87 RYIEGKEVE-AEIAEARAKLEHHHH 110 (112)
T ss_dssp TTCSSCSHH-HHHHHHHHGGGCCCC
T ss_pred HHHhCCHHH-HHHHHHHHhhcccCC
Confidence 777 66654 445577777666654
No 153
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.14 E-value=1.1e-10 Score=98.51 Aligned_cols=132 Identities=11% Similarity=0.059 Sum_probs=103.2
Q ss_pred HHHHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHH-HHHhcCHHHHHHHH
Q 017811 178 RIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAAC-LLKLKRYEEAIGQC 256 (365)
Q Consensus 178 ~~~~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~-~~kl~~~~~A~~~~ 256 (365)
....+..+...|..++..|++++|+..|++++...| +..+ +..++.+ +...+....|+..+
T Consensus 36 ~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p-~~~~-----------------~~~~~~~~~~~~~~~~~a~~~~ 97 (176)
T 2r5s_A 36 LQSRGDVKLAKADCLLETKQFELAQELLATIPLEYQ-DNSY-----------------KSLIAKLELHQQAAESPELKRL 97 (176)
T ss_dssp HHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGC-CHHH-----------------HHHHHHHHHHHHHTSCHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccC-ChHH-----------------HHHHHHHHHHhhcccchHHHHH
Confidence 345566788899999999999999999999999988 5332 2223322 22334445689999
Q ss_pred HHHHhCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCc--HHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 017811 257 SLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPED--KSIARELRLLAEHEKAVYKKQKEIYKGI 328 (365)
Q Consensus 257 ~~aL~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n--~~~~~~l~~l~~~~~~~~~~~k~~y~km 328 (365)
++++.++|+++.+++.+|.++..+|++++|+..|+++++++|+. ..++..+..+....++..+.... |++.
T Consensus 98 ~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~A~~~-y~~a 170 (176)
T 2r5s_A 98 EQELAANPDNFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQGNAIASK-YRRQ 170 (176)
T ss_dssp HHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSSCHHHHH-HHHH
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCCCcHHHH-HHHH
Confidence 99999999999999999999999999999999999999999975 56888888887766655443333 4443
No 154
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.14 E-value=4.5e-11 Score=90.46 Aligned_cols=69 Identities=19% Similarity=0.263 Sum_probs=50.6
Q ss_pred hhHHHHHHHHhcCHHHHHHHHHHHHhCCCCCHH-HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHH
Q 017811 236 HLNMAACLLKLKRYEEAIGQCSLVLGEDENNVK-ALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIA 304 (365)
Q Consensus 236 ~~nla~~~~kl~~~~~A~~~~~~aL~~~p~n~k-a~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~ 304 (365)
.+++|.++++.|+|++|+..|+++++.+|.++. +++.+|.+|..+|++++|+..|++++.++|++..+.
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 72 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQ 72 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHH
Confidence 456777777777777777777777777777777 777777777777777777777777777777776655
No 155
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.13 E-value=1.2e-10 Score=106.49 Aligned_cols=120 Identities=11% Similarity=-0.025 Sum_probs=105.8
Q ss_pred HhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHhCC
Q 017811 184 RRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGED 263 (365)
Q Consensus 184 ~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~~~ 263 (365)
.+...|..+...|++++|+..|++++...|+... .+++.+..+...+++.+|+..+++++..+
T Consensus 153 a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~-----------------~~~~~~~~l~~~~~~~~a~~~l~~al~~~ 215 (287)
T 3qou_A 153 IGLLLAETLIALNRSEDAEAVLXTIPLQDQDTRY-----------------QGLVAQIELLXQAADTPEIQQLQQQVAEN 215 (287)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHH-----------------HHHHHHHHHHHHHTSCHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHhCchhhcchHH-----------------HHHHHHHHHHhhcccCccHHHHHHHHhcC
Confidence 4556888999999999999999999999885322 36788888999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCc--HHHHHHHHHHHHHHHHHHHH
Q 017811 264 ENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPED--KSIARELRLLAEHEKAVYKK 320 (365)
Q Consensus 264 p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n--~~~~~~l~~l~~~~~~~~~~ 320 (365)
|+++.+++.+|.+|...|++++|+..|.+++.++|++ ..++..+..+....++..+.
T Consensus 216 P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~a 274 (287)
T 3qou_A 216 PEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQEILAALGTGDAL 274 (287)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHHHCTTCHH
T ss_pred CccHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHHHHHHHHcCCCCcH
Confidence 9999999999999999999999999999999999998 88888888887776654433
No 156
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.13 E-value=1.1e-10 Score=96.87 Aligned_cols=103 Identities=15% Similarity=0.072 Sum_probs=93.6
Q ss_pred chhhhHHHHHHHHhcCHHHHHHHHHHHHhC------------------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 017811 233 NPCHLNMAACLLKLKRYEEAIGQCSLVLGE------------------DENNVKALFRRGKARAELGQTDAAREDFLKAG 294 (365)
Q Consensus 233 ~~~~~nla~~~~kl~~~~~A~~~~~~aL~~------------------~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al 294 (365)
...+.++|.++++.|+|++|+..|+++|.+ +|.+..+|+++|.||..+|+|++|+.++.+++
T Consensus 11 a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al 90 (162)
T 3rkv_A 11 VEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSEVL 90 (162)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Confidence 345899999999999999999999999999 78888999999999999999999999999999
Q ss_pred hhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCcc
Q 017811 295 KFAPEDKSIARELRLLAEHEKAVYKKQKEIYKGIFGPRPEPK 336 (365)
Q Consensus 295 ~l~P~n~~~~~~l~~l~~~~~~~~~~~k~~y~kmf~~~~~~~ 336 (365)
.++|++..+...++.+...++++.++.. .|.+.+...|...
T Consensus 91 ~~~p~~~~a~~~~g~~~~~~g~~~~A~~-~~~~al~l~p~~~ 131 (162)
T 3rkv_A 91 KREETNEKALFRRAKARIAAWKLDEAEE-DLKLLLRNHPAAA 131 (162)
T ss_dssp HHSTTCHHHHHHHHHHHHHTTCHHHHHH-HHHHHHHHCGGGH
T ss_pred hcCCcchHHHHHHHHHHHHHhcHHHHHH-HHHHHHhcCCCCH
Confidence 9999999999999999998888876655 4888888877654
No 157
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.13 E-value=6.3e-10 Score=110.96 Aligned_cols=130 Identities=13% Similarity=0.050 Sum_probs=105.2
Q ss_pred HhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHhCC
Q 017811 184 RRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGED 263 (365)
Q Consensus 184 ~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~~~ 263 (365)
.+...|..+++.|++++|+..|.+++.+.|.+. .++++++.+|.+.|++++|+..+++++..+
T Consensus 375 ~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~-----------------~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~ 437 (597)
T 2xpi_A 375 TWLAVGIYYLCVNKISEARRYFSKSSTMDPQFG-----------------PAWIGFAHSFAIEGEHDQAISAYTTAARLF 437 (597)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH-----------------HHHHHHHHHHHHHTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCH-----------------HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 444566667777777777777777776666542 248899999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC
Q 017811 264 ENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEIYKGIFGP 331 (365)
Q Consensus 264 p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~~~~~~~~~k~~y~kmf~~ 331 (365)
|.+..+++.+|.+|...|++++|+..|+++++++|.+..+...+..+..+.++..++. ..|.+++..
T Consensus 438 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~-~~~~~~~~~ 504 (597)
T 2xpi_A 438 QGTHLPYLFLGMQHMQLGNILLANEYLQSSYALFQYDPLLLNELGVVAFNKSDMQTAI-NHFQNALLL 504 (597)
T ss_dssp TTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHH-HHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHHH-HHHHHHHHh
Confidence 9999999999999999999999999999999999999999888888877776665544 457777655
No 158
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.12 E-value=7.3e-10 Score=85.19 Aligned_cols=102 Identities=17% Similarity=0.048 Sum_probs=91.8
Q ss_pred hhhhHHHHHHHHhcCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHH
Q 017811 234 PCHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEH 313 (365)
Q Consensus 234 ~~~~nla~~~~kl~~~~~A~~~~~~aL~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~ 313 (365)
..++++|.+++..|+|++|+..+.+++..+|.++.+++.+|.++..+|++++|+..+++++.++|++..+...+..+...
T Consensus 5 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~ 84 (118)
T 1elw_A 5 NELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEF 84 (118)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHHHHHH
Confidence 35899999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred HHHHHHHHHHHHhcccCCCCCcc
Q 017811 314 EKAVYKKQKEIYKGIFGPRPEPK 336 (365)
Q Consensus 314 ~~~~~~~~k~~y~kmf~~~~~~~ 336 (365)
.++..+. ...|.+.+...|...
T Consensus 85 ~~~~~~A-~~~~~~~~~~~~~~~ 106 (118)
T 1elw_A 85 LNRFEEA-KRTYEEGLKHEANNP 106 (118)
T ss_dssp TTCHHHH-HHHHHHHHTTCTTCH
T ss_pred HhhHHHH-HHHHHHHHHcCCCCH
Confidence 7776554 455888888777543
No 159
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=99.12 E-value=2.7e-10 Score=87.00 Aligned_cols=76 Identities=21% Similarity=0.220 Sum_probs=68.1
Q ss_pred hhhHHHHHHHHhcCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC--cHHHHHHHHHH
Q 017811 235 CHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPE--DKSIARELRLL 310 (365)
Q Consensus 235 ~~~nla~~~~kl~~~~~A~~~~~~aL~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~--n~~~~~~l~~l 310 (365)
+++++|.+|+.+|+|++|+..++++++++|+++.+|+.+|.+|..+|++++|+..|++++.+.|. +......+..+
T Consensus 9 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~l~~~ 86 (100)
T 3ma5_A 9 TRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGTQKDLSELQDA 86 (100)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCchhHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999875 34444444433
No 160
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.12 E-value=5.1e-10 Score=82.66 Aligned_cols=84 Identities=27% Similarity=0.354 Sum_probs=77.1
Q ss_pred HHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHH
Q 017811 181 AADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVL 260 (365)
Q Consensus 181 ~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL 260 (365)
.+..+...|..++..++|.+|+..|.+++...|.+.. +++++|.++.++|++++|+.++.+++
T Consensus 8 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~-----------------~~~~l~~~~~~~~~~~~A~~~~~~a~ 70 (91)
T 1na3_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAE-----------------AWYNLGNAYYKQGDYDEAIEYYQKAL 70 (91)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHH-----------------HHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 4667888999999999999999999999999887633 48999999999999999999999999
Q ss_pred hCCCCCHHHHHHHHHHHHHcC
Q 017811 261 GEDENNVKALFRRGKARAELG 281 (365)
Q Consensus 261 ~~~p~n~ka~~~~g~a~~~l~ 281 (365)
.++|.+..+++.+|.++..+|
T Consensus 71 ~~~p~~~~~~~~l~~~~~~~g 91 (91)
T 1na3_A 71 ELDPNNAEAKQNLGNAKQKQG 91 (91)
T ss_dssp HHCTTCHHHHHHHHHHHHHHC
T ss_pred hcCCCCHHHHHHHHHHHHhcC
Confidence 999999999999999998765
No 161
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.11 E-value=3.4e-10 Score=89.36 Aligned_cols=101 Identities=13% Similarity=0.061 Sum_probs=90.8
Q ss_pred hhhhHHHHHHHHhcCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHH
Q 017811 234 PCHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEH 313 (365)
Q Consensus 234 ~~~~nla~~~~kl~~~~~A~~~~~~aL~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~ 313 (365)
..++++|.+++..|+|++|+..+++++..+|.+..+++.+|.++..+|++++|+..|++++.++|++..+...++.+...
T Consensus 17 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~ 96 (133)
T 2lni_A 17 LMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEA 96 (133)
T ss_dssp HHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHHHHHHH
Confidence 45899999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred HHHHHHHHHHHHhcccCCCCCc
Q 017811 314 EKAVYKKQKEIYKGIFGPRPEP 335 (365)
Q Consensus 314 ~~~~~~~~k~~y~kmf~~~~~~ 335 (365)
.++..+.. ..|.+.+...|..
T Consensus 97 ~~~~~~A~-~~~~~~~~~~p~~ 117 (133)
T 2lni_A 97 MKDYTKAM-DVYQKALDLDSSC 117 (133)
T ss_dssp TTCHHHHH-HHHHHHHHHCGGG
T ss_pred HhhHHHHH-HHHHHHHHhCCCc
Confidence 77766554 5588877666543
No 162
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.11 E-value=4.2e-10 Score=100.29 Aligned_cols=109 Identities=15% Similarity=-0.087 Sum_probs=92.0
Q ss_pred HHHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHH
Q 017811 179 IGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSL 258 (365)
Q Consensus 179 ~~~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~ 258 (365)
...+..+...|..++..|+|++|+..|.+++.+........ ......++.++|.+|..+|++++|+.++.+
T Consensus 82 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~---------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~ 152 (283)
T 3edt_B 82 PAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKF---------HPDVAKQLNNLALLCQNQGKAEEVEYYYRR 152 (283)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTT---------CHHHHHHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCC---------ChHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 34566788899999999999999999999999852210000 001244699999999999999999999999
Q ss_pred HHhC--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 017811 259 VLGE--------DENNVKALFRRGKARAELGQTDAAREDFLKAGKF 296 (365)
Q Consensus 259 aL~~--------~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l 296 (365)
++.+ +|....+++.+|.++..+|++++|+..|++++.+
T Consensus 153 al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~ 198 (283)
T 3edt_B 153 ALEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTR 198 (283)
T ss_dssp HHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 9998 7778899999999999999999999999999987
No 163
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.11 E-value=6.5e-10 Score=90.22 Aligned_cols=131 Identities=14% Similarity=0.001 Sum_probs=104.0
Q ss_pred HHHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHH
Q 017811 179 IGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSL 258 (365)
Q Consensus 179 ~~~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~ 258 (365)
...+..+...|..++..|+|++|+..|.+++.+.+.... ......++.++|.++..+|++++|+.++.+
T Consensus 6 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~-----------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~ 74 (164)
T 3ro3_A 6 AAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGD-----------KAAERIAYSNLGNAYIFLGEFETASEYYKK 74 (164)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTC-----------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCC-----------chHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 356778899999999999999999999999999765221 112345799999999999999999999999
Q ss_pred HHhCCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCc------HHHHHHHHHHHHHHHHHHHH
Q 017811 259 VLGEDENN------VKALFRRGKARAELGQTDAAREDFLKAGKFAPED------KSIARELRLLAEHEKAVYKK 320 (365)
Q Consensus 259 aL~~~p~n------~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n------~~~~~~l~~l~~~~~~~~~~ 320 (365)
++.+.+.. ..+++.+|.++..+|++++|+..+++++.+.+.. ..+...+..+....++..+.
T Consensus 75 a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 148 (164)
T 3ro3_A 75 TLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQA 148 (164)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHhCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHHHHccCHHHH
Confidence 99876543 6799999999999999999999999999874321 33455566665555554433
No 164
>1t11_A Trigger factor, TF; helix-turn-helix, four-helix-bundle, ppiase, chaperone; 2.50A {Vibrio cholerae} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 1l1p_A
Probab=99.11 E-value=3.9e-11 Score=114.54 Aligned_cols=87 Identities=9% Similarity=0.192 Sum_probs=76.0
Q ss_pred CCCCCCEEEEEEEEEEcCCCeeeccCcCCCCcceeecCCCCchhhhHHHHHhcCCcCcEEEEEeccccccCCCCCCCCCC
Q 017811 66 KPSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSSMKAGEHALLHVGWELGYGKEGSFSFPN 145 (365)
Q Consensus 66 ~p~~g~~v~v~y~~~~~~~g~~fd~s~~~~~p~~f~lg~~~~~i~g~e~~l~~Mk~GE~~~~~i~~~~~yg~~g~~~~~~ 145 (365)
.+..||.|+|||+|+. + |.+||++ .+.|+.|.+|.| ++||||+.+|.+|++||+..|.|++...||..+
T Consensus 160 ~~~~gD~V~i~y~g~~-d-G~~fd~~--~~~~~~~~lG~g-~~ipgfee~L~Gmk~Ge~~~v~v~fp~dy~~~~------ 228 (392)
T 1t11_A 160 AAENGKRVSIDFVGSI-D-GVEFEGG--KAENFPLEMGAG-RMIPGFEDGIVGKTKGMEFVIDVTFPEDYHAEN------ 228 (392)
T ss_dssp CCCTTCEEEEEEEEES-S-SSCCTTC--EEEEEEEETTSC-CBSTTSGGGTTTCCSSCCCCEEEECCTTCSCTT------
T ss_pred CCCCCCEEEEEEEEEE-C-CEEccCC--CccceEEEecCC-CcchhHHHHhCCCCCCCEEEEEEeCccccccCC------
Confidence 5789999999999994 5 9999987 367999999999 899999999999999999999998666787543
Q ss_pred CCCCCcEEEEEEEEeeecC
Q 017811 146 VSPMADLVYEVVLIGFDET 164 (365)
Q Consensus 146 ip~~~~l~~~iel~~~~~~ 164 (365)
.+|.++.|.|+++.+...
T Consensus 229 -laGk~~~F~V~v~~i~~~ 246 (392)
T 1t11_A 229 -LKGKAAKFAIKVNKVEAR 246 (392)
T ss_dssp -TSSCEEEECCCEEEEEEE
T ss_pred -CCCCeEEEEEEEEEEEcC
Confidence 268899999999988764
No 165
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.10 E-value=1.2e-10 Score=100.00 Aligned_cols=105 Identities=11% Similarity=-0.084 Sum_probs=93.3
Q ss_pred chhhhHHHHHHHHhcCHHHHHHHHHHHHhCCCCCH----------------HHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 017811 233 NPCHLNMAACLLKLKRYEEAIGQCSLVLGEDENNV----------------KALFRRGKARAELGQTDAAREDFLKAGKF 296 (365)
Q Consensus 233 ~~~~~nla~~~~kl~~~~~A~~~~~~aL~~~p~n~----------------ka~~~~g~a~~~l~~~~~A~~~l~~al~l 296 (365)
...+.++|.+++..|+|++|+..|.+++.+.|.++ .+++++|.++..+|+|++|+.++++++.+
T Consensus 38 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~ 117 (198)
T 2fbn_A 38 AFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLKI 117 (198)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 34588999999999999999999999999999887 89999999999999999999999999999
Q ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCcccc
Q 017811 297 APEDKSIARELRLLAEHEKAVYKKQKEIYKGIFGPRPEPKQK 338 (365)
Q Consensus 297 ~P~n~~~~~~l~~l~~~~~~~~~~~k~~y~kmf~~~~~~~~~ 338 (365)
+|++..+...++.+...++++.++ ...|.+.+...|.....
T Consensus 118 ~p~~~~~~~~lg~~~~~~~~~~~A-~~~~~~al~~~p~~~~~ 158 (198)
T 2fbn_A 118 DKNNVKALYKLGVANMYFGFLEEA-KENLYKAASLNPNNLDI 158 (198)
T ss_dssp STTCHHHHHHHHHHHHHHTCHHHH-HHHHHHHHHHSTTCHHH
T ss_pred CcccHHHHHHHHHHHHHcccHHHH-HHHHHHHHHHCCCcHHH
Confidence 999999999999998888877655 45588888777765443
No 166
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.10 E-value=5.2e-10 Score=105.94 Aligned_cols=139 Identities=17% Similarity=0.100 Sum_probs=102.7
Q ss_pred HHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHH
Q 017811 180 GAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLV 259 (365)
Q Consensus 180 ~~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~a 259 (365)
..+..+...|..++..|+|..|+..|.+|+.+.+..... ......++.++|.+|..+|+|++|+.++.++
T Consensus 141 ~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~----------~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~a 210 (383)
T 3ulq_A 141 EKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAY----------NIRLLQCHSLFATNFLDLKQYEDAISHFQKA 210 (383)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTT----------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccc----------hHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 456777888888888888888888888888887654221 0112456888888888888898898888888
Q ss_pred HhCCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHh-----hC-CCcHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 017811 260 LGEDENN------VKALFRRGKARAELGQTDAAREDFLKAGK-----FA-PEDKSIARELRLLAEHEKAVYKKQKEIYKG 327 (365)
Q Consensus 260 L~~~p~n------~ka~~~~g~a~~~l~~~~~A~~~l~~al~-----l~-P~n~~~~~~l~~l~~~~~~~~~~~k~~y~k 327 (365)
+.+.+.. ..+++++|.+|..+|++++|+..|++++. .+ |....+...++.+...+++..++. ..|.+
T Consensus 211 l~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~-~~~~~ 289 (383)
T 3ulq_A 211 YSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKIDKAH-EYHSK 289 (383)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHTTCHHHHH-HHHHH
T ss_pred HHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHCCCHHHHH-HHHHH
Confidence 8775433 25888888888888888888888888888 45 666777777787777666655433 33555
Q ss_pred cc
Q 017811 328 IF 329 (365)
Q Consensus 328 mf 329 (365)
.+
T Consensus 290 al 291 (383)
T 3ulq_A 290 GM 291 (383)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 167
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.10 E-value=4.1e-10 Score=88.94 Aligned_cols=101 Identities=20% Similarity=0.119 Sum_probs=90.0
Q ss_pred hhhHHHHHHHHhcCHHHHHHHHHHHHhCCCCCH---HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCc---HHHHHHHH
Q 017811 235 CHLNMAACLLKLKRYEEAIGQCSLVLGEDENNV---KALFRRGKARAELGQTDAAREDFLKAGKFAPED---KSIARELR 308 (365)
Q Consensus 235 ~~~nla~~~~kl~~~~~A~~~~~~aL~~~p~n~---ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n---~~~~~~l~ 308 (365)
+++++|.+++..|+|++|+..+.+++..+|++. .+++.+|.++..+|+|++|+..|++++.++|++ ..+...++
T Consensus 4 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~la 83 (129)
T 2xev_A 4 TAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKLG 83 (129)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHHH
Confidence 488999999999999999999999999999998 899999999999999999999999999999999 88899999
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCCCCcc
Q 017811 309 LLAEHEKAVYKKQKEIYKGIFGPRPEPK 336 (365)
Q Consensus 309 ~l~~~~~~~~~~~k~~y~kmf~~~~~~~ 336 (365)
.+....++..+.. ..|.+++...|+..
T Consensus 84 ~~~~~~g~~~~A~-~~~~~~~~~~p~~~ 110 (129)
T 2xev_A 84 LSQYGEGKNTEAQ-QTLQQVATQYPGSD 110 (129)
T ss_dssp HHHHHTTCHHHHH-HHHHHHHHHSTTSH
T ss_pred HHHHHcCCHHHHH-HHHHHHHHHCCCCh
Confidence 9988777766544 55888877766544
No 168
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.09 E-value=1.7e-09 Score=107.82 Aligned_cols=151 Identities=13% Similarity=0.012 Sum_probs=111.5
Q ss_pred HHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhh--------hhhhH---HHHHHH------hhchhhhHHHHHHHH
Q 017811 183 DRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQ--------LFGKY---RDMALA------VKNPCHLNMAACLLK 245 (365)
Q Consensus 183 ~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~--------~~~~~---~~~~~~------~~~~~~~nla~~~~k 245 (365)
..+...|..+++.|++++|+..|++++...|.+...- ..+.. ...... -...+++++|.+|.+
T Consensus 306 ~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~ 385 (597)
T 2xpi_A 306 DLLLCKADTLFVRSRFIDVLAITTKILEIDPYNLDVYPLHLASLHESGEKNKLYLISNDLVDRHPEKAVTWLAVGIYYLC 385 (597)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCCTTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHH
Confidence 3455678889999999999999999999887653310 00000 011111 113467888888888
Q ss_pred hcCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017811 246 LKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEIY 325 (365)
Q Consensus 246 l~~~~~A~~~~~~aL~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~~~~~~~~~k~~y 325 (365)
.|++++|+..++++++++|.+..+|+.+|.+|...|++++|+..|++++.+.|++..+...+..+....++..+. ...|
T Consensus 386 ~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A-~~~~ 464 (597)
T 2xpi_A 386 VNKISEARRYFSKSSTMDPQFGPAWIGFAHSFAIEGEHDQAISAYTTAARLFQGTHLPYLFLGMQHMQLGNILLA-NEYL 464 (597)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHTCHHHH-HHHH
T ss_pred hccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCCHHHH-HHHH
Confidence 888888888888888888888888888888888888888888888888888888888888888777766665544 4458
Q ss_pred hcccCCCCC
Q 017811 326 KGIFGPRPE 334 (365)
Q Consensus 326 ~kmf~~~~~ 334 (365)
.+|+...|.
T Consensus 465 ~~~~~~~~~ 473 (597)
T 2xpi_A 465 QSSYALFQY 473 (597)
T ss_dssp HHHHHHCCC
T ss_pred HHHHHhCCC
Confidence 888766554
No 169
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.09 E-value=2.4e-10 Score=105.44 Aligned_cols=142 Identities=13% Similarity=0.035 Sum_probs=102.3
Q ss_pred HHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHH
Q 017811 181 AADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVL 260 (365)
Q Consensus 181 ~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL 260 (365)
.+..+...|+.+...|+|.+|+..|++|+.+.+..... .....++.|+|.+|.. |++++|+.+|++++
T Consensus 75 ~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~-----------~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al 142 (307)
T 2ifu_A 75 AAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTP-----------DTAAMALDRAGKLMEP-LDLSKAVHLYQQAA 142 (307)
T ss_dssp HHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCH-----------HHHHHHHHHHHHHHTT-TCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCH-----------HHHHHHHHHHHHHHHc-CCHHHHHHHHHHHH
Confidence 35566777888888888888888888888876432110 0124568899999988 99999999999999
Q ss_pred hCCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcH------HHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 017811 261 GEDENN------VKALFRRGKARAELGQTDAAREDFLKAGKFAPEDK------SIARELRLLAEHEKAVYKKQKEIYKGI 328 (365)
Q Consensus 261 ~~~p~n------~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~------~~~~~l~~l~~~~~~~~~~~k~~y~km 328 (365)
.+.|.. ..+++++|.+|..+|+|++|+..|++++.+.|++. .+...+..+...+++..++ ...|.+.
T Consensus 143 ~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A-~~~~~~a 221 (307)
T 2ifu_A 143 AVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEMENYPTCYKKCIAQVLVQLHRADYVAA-QKCVRES 221 (307)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHH-HHHHHHH
T ss_pred HHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcCCHHHH-HHHHHHH
Confidence 887653 67899999999999999999999999999876542 2333444454444555444 4457777
Q ss_pred cCCCCCcc
Q 017811 329 FGPRPEPK 336 (365)
Q Consensus 329 f~~~~~~~ 336 (365)
+ ..|...
T Consensus 222 l-~~p~~~ 228 (307)
T 2ifu_A 222 Y-SIPGFS 228 (307)
T ss_dssp T-TSTTST
T ss_pred h-CCCCCC
Confidence 7 666443
No 170
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.08 E-value=3e-10 Score=103.79 Aligned_cols=136 Identities=10% Similarity=-0.021 Sum_probs=105.7
Q ss_pred HHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHh
Q 017811 182 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLG 261 (365)
Q Consensus 182 a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~ 261 (365)
+.-+...|..++..++|++|+..|.+|+.+.+..... .....++.|+|.+|..+|+|++|+.++.++|+
T Consensus 115 ~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~-----------~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~ 183 (293)
T 3u3w_A 115 LQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDV-----------YQNLYIENAIANIYAENGYLKKGIDLFEQILK 183 (293)
T ss_dssp HHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCT-----------THHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccCHHHHHHHHHHHHHHhcccccH-----------HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 4455568888888899999999999999976543221 01234699999999999999999999999994
Q ss_pred -------CCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCc------HHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 017811 262 -------EDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPED------KSIARELRLLAEHEKAVYKKQKEIYKGI 328 (365)
Q Consensus 262 -------~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n------~~~~~~l~~l~~~~~~~~~~~k~~y~km 328 (365)
..+....+++++|.+|..+|+|++|+..+++++.+.+.. ..+...++.+...+++..++....|.+.
T Consensus 184 ~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~~A~~~~~~A 263 (293)
T 3u3w_A 184 QLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKA 263 (293)
T ss_dssp HHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred HHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHH
Confidence 233446799999999999999999999999999987654 6778888888877774333444445544
No 171
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.07 E-value=9.3e-10 Score=90.43 Aligned_cols=105 Identities=16% Similarity=-0.010 Sum_probs=93.6
Q ss_pred chhhhHHHHHHHHhcCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHH
Q 017811 233 NPCHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAE 312 (365)
Q Consensus 233 ~~~~~nla~~~~kl~~~~~A~~~~~~aL~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~ 312 (365)
...+.++|.+++..|+|++|+..+.+++.++|.+..+++.+|.++..+|+|++|+..|++++.++|++..+...++.+..
T Consensus 13 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~ 92 (166)
T 1a17_A 13 AEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNM 92 (166)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHH
Confidence 34589999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHHHhcccCCCCCcccc
Q 017811 313 HEKAVYKKQKEIYKGIFGPRPEPKQK 338 (365)
Q Consensus 313 ~~~~~~~~~k~~y~kmf~~~~~~~~~ 338 (365)
..++..+.. ..|.+.+...|.....
T Consensus 93 ~~~~~~~A~-~~~~~a~~~~p~~~~~ 117 (166)
T 1a17_A 93 ALGKFRAAL-RDYETVVKVKPHDKDA 117 (166)
T ss_dssp HTTCHHHHH-HHHHHHHHHSTTCHHH
T ss_pred HhccHHHHH-HHHHHHHHhCCCCHHH
Confidence 877776554 5588888777755443
No 172
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.07 E-value=1.3e-09 Score=106.01 Aligned_cols=129 Identities=10% Similarity=0.045 Sum_probs=96.1
Q ss_pred HHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhh--------hhhHHHH---H---HHh---h------chhhhHH
Q 017811 183 DRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQL--------FGKYRDM---A---LAV---K------NPCHLNM 239 (365)
Q Consensus 183 ~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~--------~~~~~~~---~---~~~---~------~~~~~nl 239 (365)
..+...|..++..|++.+|+..|.+++...|.+...-. .+...+. . ..+ . ..+++++
T Consensus 339 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l 418 (514)
T 2gw1_A 339 FPYIQLACLAYRENKFDDCETLFSEAKRKFPEAPEVPNFFAEILTDKNDFDKALKQYDLAIELENKLDGIYVGIAPLVGK 418 (514)
T ss_dssp HHHHHHHHHTTTTTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSSSCSSCSHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccchHHHHHHHHHHH
Confidence 34555666666666666666666666666654332100 0110000 0 000 0 1279999
Q ss_pred HHHHHH---hcCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHH
Q 017811 240 AACLLK---LKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLA 311 (365)
Q Consensus 240 a~~~~k---l~~~~~A~~~~~~aL~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~ 311 (365)
|.++.. +|++++|+..+++++.++|++..+++.+|.++..+|++++|+..|++++.++|++..+...+..+.
T Consensus 419 ~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~ 493 (514)
T 2gw1_A 419 ATLLTRNPTVENFIEATNLLEKASKLDPRSEQAKIGLAQMKLQQEDIDEAITLFEESADLARTMEEKLQAITFAE 493 (514)
T ss_dssp HHHHHTSCCTTHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSHHHHHHHHHHHH
T ss_pred HHHHhhhhhcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhccccHHHHHHHHHHH
Confidence 999999 999999999999999999999999999999999999999999999999999999999888776553
No 173
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.06 E-value=8.6e-10 Score=104.71 Aligned_cols=125 Identities=12% Similarity=0.064 Sum_probs=109.5
Q ss_pred HHHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHH
Q 017811 179 IGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSL 258 (365)
Q Consensus 179 ~~~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~ 258 (365)
...+..+...|..++..|+|.+|+..|++++...|.+.. ....+++++|.+|..+|+|++|+.++++
T Consensus 45 ~~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~-------------~~~~~~~~lg~~~~~~g~~~~A~~~~~~ 111 (411)
T 4a1s_A 45 SSMCLELALEGERLCNAGDCRAGVAFFQAAIQAGTEDLR-------------TLSAIYSQLGNAYFYLGDYNKAMQYHKH 111 (411)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHH-------------HHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhcccChh-------------HHHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 456778889999999999999999999999999887532 1345699999999999999999999999
Q ss_pred HHhC------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh------CCCcHHHHHHHHHHHHHHHH
Q 017811 259 VLGE------DENNVKALFRRGKARAELGQTDAAREDFLKAGKF------APEDKSIARELRLLAEHEKA 316 (365)
Q Consensus 259 aL~~------~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l------~P~n~~~~~~l~~l~~~~~~ 316 (365)
++.+ +|....+++.+|.+|..+|++++|+..|++++.+ .|....+...+..+....++
T Consensus 112 al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 181 (411)
T 4a1s_A 112 DLTLAKSMNDRLGEAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYHAKGK 181 (411)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHccCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHcCc
Confidence 9988 6778899999999999999999999999999999 45556677788888777777
No 174
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.06 E-value=1e-09 Score=82.83 Aligned_cols=59 Identities=12% Similarity=0.018 Sum_probs=52.1
Q ss_pred hhhHHHHHHHHhcCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcH
Q 017811 235 CHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDK 301 (365)
Q Consensus 235 ~~~nla~~~~kl~~~~~A~~~~~~aL~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~ 301 (365)
+++++|.||..+|++++|+.++++++.++|++..++++ +.+.+|+..|++++.++|++.
T Consensus 37 ~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~--------~~~~~a~~~~~~~~~~~p~~~ 95 (99)
T 2kc7_A 37 AYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQAR--------KMVMDILNFYNKDMYNQLEHH 95 (99)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHH--------HHHHHHHHHHCCTTHHHHCCS
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHH--------HHHHHHHHHHHHHhccCcccc
Confidence 88999999999999999999999999999999998865 677888888988888888753
No 175
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=99.06 E-value=1.9e-09 Score=106.04 Aligned_cols=144 Identities=15% Similarity=0.056 Sum_probs=109.7
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHH
Q 017811 175 VEERIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIG 254 (365)
Q Consensus 175 ~~e~~~~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~ 254 (365)
..+.++.+....+.+..+..+|+|++|+..|+++|.+....... + ......++.|||.+|..+|+|++|+.
T Consensus 302 v~~~l~~a~~~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~----~-----Hp~~a~~~~nLa~~y~~~g~~~eA~~ 372 (490)
T 3n71_A 302 VKEMIQFSKDTLEKIDKARSEGLYHEVVKLCRECLEKQEPVFAD----T-----NLYVLRLLSIASEVLSYLQAYEEASH 372 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCT----T-----SHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCC----C-----CHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 34556677778888888889999999999999999987542110 0 01134569999999999999999999
Q ss_pred HHHHHHhC-----CCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHhh-----CCCcHHHHH---HHHHHHHHHHHHH
Q 017811 255 QCSLVLGE-----DENN---VKALFRRGKARAELGQTDAAREDFLKAGKF-----APEDKSIAR---ELRLLAEHEKAVY 318 (365)
Q Consensus 255 ~~~~aL~~-----~p~n---~ka~~~~g~a~~~l~~~~~A~~~l~~al~l-----~P~n~~~~~---~l~~l~~~~~~~~ 318 (365)
++.++|.+ .|++ ..+++++|.+|..+|+|++|+..|++|+.+ -|+++.+.. .+..++..++.++
T Consensus 373 ~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~~ 452 (490)
T 3n71_A 373 YARRMVDGYMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELRMFR 452 (490)
T ss_dssp HHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHH
Confidence 99999964 3555 568999999999999999999999999985 566665554 4555555566666
Q ss_pred HHHHHHHhcc
Q 017811 319 KKQKEIYKGI 328 (365)
Q Consensus 319 ~~~k~~y~km 328 (365)
+++.. |+++
T Consensus 453 ~ae~~-~~~~ 461 (490)
T 3n71_A 453 QNEFM-YHKM 461 (490)
T ss_dssp HHHHH-HHHH
T ss_pred HHHHH-HHHH
Confidence 55544 5544
No 176
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.05 E-value=1.6e-09 Score=84.81 Aligned_cols=102 Identities=16% Similarity=0.135 Sum_probs=91.1
Q ss_pred chhhhHHHHHHHHhcCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHH
Q 017811 233 NPCHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAE 312 (365)
Q Consensus 233 ~~~~~nla~~~~kl~~~~~A~~~~~~aL~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~ 312 (365)
..+++.+|.++...|+|++|+..+.+++..+|.+..+++.+|.++..+|++++|+..|.+++.++|++..+...++.+..
T Consensus 12 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (131)
T 2vyi_A 12 AERLKTEGNEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGLALS 91 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHHHHHHH
Confidence 34689999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHHHhcccCCCCCc
Q 017811 313 HEKAVYKKQKEIYKGIFGPRPEP 335 (365)
Q Consensus 313 ~~~~~~~~~k~~y~kmf~~~~~~ 335 (365)
..++..+.. ..|.+.+...|..
T Consensus 92 ~~~~~~~A~-~~~~~~~~~~p~~ 113 (131)
T 2vyi_A 92 SLNKHVEAV-AYYKKALELDPDN 113 (131)
T ss_dssp HTTCHHHHH-HHHHHHHHHSTTC
T ss_pred HhCCHHHHH-HHHHHHHhcCccc
Confidence 777766554 4588877766644
No 177
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.03 E-value=2.2e-09 Score=83.21 Aligned_cols=102 Identities=24% Similarity=0.249 Sum_probs=90.4
Q ss_pred hhhhHHHHHHHHhcCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHH
Q 017811 234 PCHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEH 313 (365)
Q Consensus 234 ~~~~nla~~~~kl~~~~~A~~~~~~aL~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~ 313 (365)
.+++++|.++...|++++|+..+.+++..+|.+..+++.+|.++...|++++|+..|++++.++|.+..+...+..+...
T Consensus 10 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~ 89 (125)
T 1na0_A 10 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYK 89 (125)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHH
Confidence 45899999999999999999999999999999999999999999999999999999999999999999999999988777
Q ss_pred HHHHHHHHHHHHhcccCCCCCcc
Q 017811 314 EKAVYKKQKEIYKGIFGPRPEPK 336 (365)
Q Consensus 314 ~~~~~~~~k~~y~kmf~~~~~~~ 336 (365)
.++..+. ...|.+++...|...
T Consensus 90 ~~~~~~A-~~~~~~~~~~~~~~~ 111 (125)
T 1na0_A 90 QGDYDEA-IEYYQKALELDPNNA 111 (125)
T ss_dssp TTCHHHH-HHHHHHHHHHCTTCH
T ss_pred hcCHHHH-HHHHHHHHHhCCCcH
Confidence 7666544 455888877666543
No 178
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.02 E-value=8.5e-10 Score=100.79 Aligned_cols=107 Identities=16% Similarity=0.140 Sum_probs=89.9
Q ss_pred HHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHH
Q 017811 181 AADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVL 260 (365)
Q Consensus 181 ~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL 260 (365)
.+..+...|..++..|+|++|+..|++|+......... ......+++|+|.+|.++|+|++|+.++++++
T Consensus 154 ~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~----------~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al 223 (293)
T 3u3w_A 154 NLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDN----------EEFDVKVRYNHAKALYLDSRYEESLYQVNKAI 223 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCC----------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccc----------hhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 35568899999999999999999999999866432110 12235579999999999999999999999999
Q ss_pred hCCCCC------HHHHHHHHHHHHHcC-CHHHHHHHHHHHHhhC
Q 017811 261 GEDENN------VKALFRRGKARAELG-QTDAAREDFLKAGKFA 297 (365)
Q Consensus 261 ~~~p~n------~ka~~~~g~a~~~l~-~~~~A~~~l~~al~l~ 297 (365)
++.+.+ ..+|+++|.++..+| ++++|+..|++|+.+.
T Consensus 224 ~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i~ 267 (293)
T 3u3w_A 224 EISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFF 267 (293)
T ss_dssp HHHHHTTBCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHcCcHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHH
Confidence 876544 789999999999999 5799999999999864
No 179
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.02 E-value=1.5e-09 Score=99.11 Aligned_cols=133 Identities=10% Similarity=-0.039 Sum_probs=96.8
Q ss_pred hhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHH---h
Q 017811 185 RKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVL---G 261 (365)
Q Consensus 185 ~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL---~ 261 (365)
+...|..+...|+|++|+..|.+|+.+.+..... .....+++++|.+|..+|+|++|+.++++++ +
T Consensus 118 ~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~-----------~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~ 186 (293)
T 2qfc_A 118 QYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDV-----------YQNLYIENAIANIYAENGYLKKGIDLFEQILKQLE 186 (293)
T ss_dssp HHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCT-----------THHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCch-----------HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 3345555666666666666666666654432110 0013479999999999999999999999999 4
Q ss_pred CCCCCH----HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC------cHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 017811 262 EDENNV----KALFRRGKARAELGQTDAAREDFLKAGKFAPE------DKSIARELRLLAEHEKAVYKKQKEIYKGI 328 (365)
Q Consensus 262 ~~p~n~----ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~------n~~~~~~l~~l~~~~~~~~~~~k~~y~km 328 (365)
..|++. .+++++|.+|..+|+|++|+..|++++.+.++ -..+...++.+...+++..++....|.+.
T Consensus 187 ~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~A 263 (293)
T 2qfc_A 187 ALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKA 263 (293)
T ss_dssp HSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCSSHHHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred hcCccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHH
Confidence 556543 79999999999999999999999999998643 15677778888877776665544445544
No 180
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.02 E-value=1.9e-09 Score=101.98 Aligned_cols=109 Identities=17% Similarity=0.206 Sum_probs=95.3
Q ss_pred HHHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHH
Q 017811 179 IGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSL 258 (365)
Q Consensus 179 ~~~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~ 258 (365)
...+..+...|..+...|+|++|+..|.+|+.+.+.... ......++.|+|.||..+|++++|+.++++
T Consensus 181 ~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~-----------~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~ 249 (383)
T 3ulq_A 181 IRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQ-----------PQLMGRTLYNIGLCKNSQSQYEDAIPYFKR 249 (383)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC-----------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCC-----------hHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 345677888999999999999999999999999875321 112345799999999999999999999999
Q ss_pred HHh-----CC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC
Q 017811 259 VLG-----ED-ENNVKALFRRGKARAELGQTDAAREDFLKAGKFAP 298 (365)
Q Consensus 259 aL~-----~~-p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P 298 (365)
++. .+ |....+++.+|.++..+|++++|+..|++++.+.+
T Consensus 250 al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 295 (383)
T 3ulq_A 250 AIAVFEESNILPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQ 295 (383)
T ss_dssp HHHHHHHTTCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhccchhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 999 57 88899999999999999999999999999999854
No 181
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.02 E-value=1.2e-09 Score=100.58 Aligned_cols=109 Identities=14% Similarity=0.042 Sum_probs=92.6
Q ss_pred HHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHH
Q 017811 180 GAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLV 259 (365)
Q Consensus 180 ~~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~a 259 (365)
..+..+...|..+.. |+|++|+..|++|+.+.+..... .....++.|+|.+|.++|+|++|+.+|+++
T Consensus 114 ~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~-----------~~~~~~~~~lg~~~~~~g~~~~A~~~~~~a 181 (307)
T 2ifu_A 114 TAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERL-----------RQAAELIGKASRLLVRQQKFDEAAASLQKE 181 (307)
T ss_dssp HHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCH-----------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCCh-----------hHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 346678889999988 99999999999999998753110 112457999999999999999999999999
Q ss_pred HhCCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcH
Q 017811 260 LGEDENN------VKALFRRGKARAELGQTDAAREDFLKAGKFAPEDK 301 (365)
Q Consensus 260 L~~~p~n------~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~ 301 (365)
+.+.|.+ ..+++.+|.++..+|++++|+..|++++ ++|...
T Consensus 182 l~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al-~~p~~~ 228 (307)
T 2ifu_A 182 KSMYKEMENYPTCYKKCIAQVLVQLHRADYVAAQKCVRESY-SIPGFS 228 (307)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT-TSTTST
T ss_pred HHHHHHcCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHh-CCCCCC
Confidence 9986644 3588999999999999999999999999 999754
No 182
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.02 E-value=9.2e-10 Score=99.76 Aligned_cols=108 Identities=16% Similarity=-0.039 Sum_probs=90.4
Q ss_pred HHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHH
Q 017811 180 GAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLV 259 (365)
Q Consensus 180 ~~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~a 259 (365)
..+..+...|..++..|+|.+|+..|.+++.+........ ......++.++|.++..+|++++|+.+++++
T Consensus 109 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~---------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a 179 (311)
T 3nf1_A 109 AVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKD---------HPDVAKQLNNLALLCQNQGKYEEVEYYYQRA 179 (311)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTT---------CHHHHHHHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCC---------ChHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 4456778899999999999999999999999862110000 0012446999999999999999999999999
Q ss_pred HhC--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 017811 260 LGE--------DENNVKALFRRGKARAELGQTDAAREDFLKAGKF 296 (365)
Q Consensus 260 L~~--------~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l 296 (365)
+.+ +|....+++.+|.+|..+|++++|+..|++++.+
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 224 (311)
T 3nf1_A 180 LEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEILTR 224 (311)
T ss_dssp HHHHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 988 7778889999999999999999999999999985
No 183
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=99.02 E-value=1.7e-09 Score=88.58 Aligned_cols=104 Identities=14% Similarity=0.127 Sum_probs=89.2
Q ss_pred hhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhc---CHHHHHHHHHHHHhCC-C-CCHH
Q 017811 194 KEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLK---RYEEAIGQCSLVLGED-E-NNVK 268 (365)
Q Consensus 194 ~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~---~~~~A~~~~~~aL~~~-p-~n~k 268 (365)
.......+.+.|.+.+...+.+ ..+.+|+|.|+.+.+ +.++++..++.+++.+ | .+..
T Consensus 10 ~~~~l~~~~~~y~~e~~~~~~~-----------------~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd 72 (152)
T 1pc2_A 10 SVEDLLKFEKKFQSEKAAGSVS-----------------KSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRD 72 (152)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCC-----------------HHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHH
T ss_pred CHHHHHHHHHHHHHHHccCCCc-----------------HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHH
Confidence 3455677888888888765543 235899999999988 7779999999999998 7 6799
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHH
Q 017811 269 ALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHE 314 (365)
Q Consensus 269 a~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~~ 314 (365)
++|.+|.+++.+++|++|+.+++++|+++|+|..+......+..+.
T Consensus 73 ~lY~LAv~~~kl~~Y~~A~~y~~~lL~ieP~n~QA~~Lk~~ie~~~ 118 (152)
T 1pc2_A 73 YVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERLIDKAM 118 (152)
T ss_dssp HHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999998888776544
No 184
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.02 E-value=1.3e-09 Score=98.78 Aligned_cols=141 Identities=16% Similarity=0.106 Sum_probs=112.7
Q ss_pred HHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHH
Q 017811 180 GAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLV 259 (365)
Q Consensus 180 ~~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~a 259 (365)
..+..+...|..++..|+|++|+..|.+++.+........ ......++.++|.+|..+|++++|+.++.++
T Consensus 67 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~---------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 137 (311)
T 3nf1_A 67 DVATMLNILALVYRDQNKYKDAANLLNDALAIREKTLGKD---------HPAVAATLNNLAVLYGKRGKYKEAEPLCKRA 137 (311)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTT---------CHHHHHHHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCC---------ChHHHHHHHHHHHHHHHcCcHHHHHHHHHHH
Confidence 4456678899999999999999999999999863210000 0112446999999999999999999999999
Q ss_pred HhCC--------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh--------CCCcHHHHHHHHHHHHHHHHHHHHHHH
Q 017811 260 LGED--------ENNVKALFRRGKARAELGQTDAAREDFLKAGKF--------APEDKSIARELRLLAEHEKAVYKKQKE 323 (365)
Q Consensus 260 L~~~--------p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l--------~P~n~~~~~~l~~l~~~~~~~~~~~k~ 323 (365)
+.+. |....+++.+|.++..+|++++|+..|++++.+ .|....+...+..+....++..++..
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~- 216 (311)
T 3nf1_A 138 LEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAET- 216 (311)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHH-
T ss_pred HHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHHHH-
Confidence 9874 667789999999999999999999999999998 67677788888888777777665443
Q ss_pred HHhcccC
Q 017811 324 IYKGIFG 330 (365)
Q Consensus 324 ~y~kmf~ 330 (365)
.|.+++.
T Consensus 217 ~~~~al~ 223 (311)
T 3nf1_A 217 LYKEILT 223 (311)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 3666553
No 185
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.02 E-value=2.1e-09 Score=101.69 Aligned_cols=141 Identities=13% Similarity=0.065 Sum_probs=102.7
Q ss_pred HHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHH
Q 017811 180 GAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLV 259 (365)
Q Consensus 180 ~~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~a 259 (365)
..+..+...|..++..|++..|+..|.+|+.+.+..... ......++.++|.+|..+|+|++|+.++.++
T Consensus 139 ~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~----------~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~a 208 (378)
T 3q15_A 139 EKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLY----------SIRTIQSLFVIAGNYDDFKHYDKALPHLEAA 208 (378)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTC----------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCc----------hhhHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 455666677777777777777777777777776543211 0113456889999999999999999999998
Q ss_pred HhCCC------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHh-----hCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 017811 260 LGEDE------NNVKALFRRGKARAELGQTDAAREDFLKAGK-----FAPEDKSIARELRLLAEHEKAVYKKQKEIYKGI 328 (365)
Q Consensus 260 L~~~p------~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~-----l~P~n~~~~~~l~~l~~~~~~~~~~~k~~y~km 328 (365)
+.+.+ ....+++++|.+|..+|++++|+..|++++. .+|....+...++.+...+++..++. ..|.+.
T Consensus 209 l~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~-~~~~~a 287 (378)
T 3q15_A 209 LELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQTQKAF-QFIEEG 287 (378)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHTTCHHHHH-HHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHCCCHHHHH-HHHHHH
Confidence 87632 2246888899999999999999999999998 67777777888888877776665443 446665
Q ss_pred cCC
Q 017811 329 FGP 331 (365)
Q Consensus 329 f~~ 331 (365)
+..
T Consensus 288 l~~ 290 (378)
T 3q15_A 288 LDH 290 (378)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 186
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.01 E-value=3.1e-09 Score=100.49 Aligned_cols=109 Identities=14% Similarity=-0.016 Sum_probs=95.8
Q ss_pred HHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHH
Q 017811 180 GAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLV 259 (365)
Q Consensus 180 ~~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~a 259 (365)
..+..+...|..++..|+|++|+..|.+|+.+.+.... ......++.|+|.||..+|++++|+.++.++
T Consensus 180 ~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~-----------~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~a 248 (378)
T 3q15_A 180 RTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQN-----------DRFIAISLLNIANSYDRSGDDQMAVEHFQKA 248 (378)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC-----------HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCC-----------HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 45777889999999999999999999999998754211 1123557999999999999999999999999
Q ss_pred Hh-----CCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Q 017811 260 LG-----EDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPE 299 (365)
Q Consensus 260 L~-----~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~ 299 (365)
+. .+|....+++.+|.++..+|++++|+..+++++.+.+.
T Consensus 249 l~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 293 (378)
T 3q15_A 249 AKVSREKVPDLLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITA 293 (378)
T ss_dssp HHHHHHHCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCT
T ss_pred HHHHHhhCChhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 99 88989999999999999999999999999999999654
No 187
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.01 E-value=4.6e-09 Score=105.37 Aligned_cols=138 Identities=14% Similarity=0.056 Sum_probs=119.7
Q ss_pred HHHhhhhhhhhhhhhh----------HHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhc--CH
Q 017811 182 ADRRKMDGNALFKEEK----------LEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLK--RY 249 (365)
Q Consensus 182 a~~~k~~G~~~~~~~~----------y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~--~~ 249 (365)
...+..+|..+...++ |.+|+..|.+++...|.++. ++++++.++.+++ +|
T Consensus 63 ~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK~y~-----------------aW~hR~w~l~~l~~~~~ 125 (567)
T 1dce_A 63 ATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYG-----------------TWHHRCWLLSRLPEPNW 125 (567)
T ss_dssp HHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHTCSSCCH
T ss_pred HHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCCCHH-----------------HHHHHHHHHHHcccccH
Confidence 3456778888888888 99999999999999999865 4999999999999 78
Q ss_pred HHHHHHHHHHHhCCCCCHHHHHHHHHHHHHcC-CHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHH-------------H
Q 017811 250 EEAIGQCSLVLGEDENNVKALFRRGKARAELG-QTDAAREDFLKAGKFAPEDKSIARELRLLAEHE-------------K 315 (365)
Q Consensus 250 ~~A~~~~~~aL~~~p~n~ka~~~~g~a~~~l~-~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~~-------------~ 315 (365)
++++.+|+++|++||.|..||+.|+.++..++ .++++++++.++++++|+|..+......+.... .
T Consensus 126 ~~el~~~~k~l~~d~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n~saW~~r~~ll~~l~~~~~~~~~~~~~~ 205 (567)
T 1dce_A 126 ARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPE 205 (567)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCHHHHHHHHHHHHHHSCCCCSSSCCSSCH
T ss_pred HHHHHHHHHHHhhccccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCCccHHHHHHHHHHhhcccccccccccccH
Confidence 99999999999999999999999999999999 999999999999999999999999998887764 2
Q ss_pred HHHHHHHHHHhcccCCCCCcc
Q 017811 316 AVYKKQKEIYKGIFGPRPEPK 336 (365)
Q Consensus 316 ~~~~~~k~~y~kmf~~~~~~~ 336 (365)
...+.+-..|.+.+...|...
T Consensus 206 ~~~~eel~~~~~ai~~~P~~~ 226 (567)
T 1dce_A 206 NVLLKELELVQNAFFTDPNDQ 226 (567)
T ss_dssp HHHHHHHHHHHHHHHHCSSCS
T ss_pred HHHHHHHHHHHHHHhhCCCCc
Confidence 334556666777776666543
No 188
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.01 E-value=1.9e-09 Score=86.69 Aligned_cols=102 Identities=17% Similarity=0.050 Sum_probs=91.0
Q ss_pred hhhhHHHHHHHHhcCHHHHHHHHHHHHhCCCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHH
Q 017811 234 PCHLNMAACLLKLKRYEEAIGQCSLVLGEDENN---VKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLL 310 (365)
Q Consensus 234 ~~~~nla~~~~kl~~~~~A~~~~~~aL~~~p~n---~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l 310 (365)
..++++|.+++..|+|++|+..+++++.++|++ ..+++.+|.++..+++|++|+..|++++.++|++..+...+..+
T Consensus 29 ~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~ 108 (148)
T 2dba_A 29 EQLRKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKALYRRSQA 108 (148)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHHHHHHHH
Confidence 358899999999999999999999999999988 89999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcccCCCCCcc
Q 017811 311 AEHEKAVYKKQKEIYKGIFGPRPEPK 336 (365)
Q Consensus 311 ~~~~~~~~~~~k~~y~kmf~~~~~~~ 336 (365)
....+++.+. ...|.+.+...|...
T Consensus 109 ~~~~~~~~~A-~~~~~~al~~~p~~~ 133 (148)
T 2dba_A 109 LEKLGRLDQA-VLDLQRCVSLEPKNK 133 (148)
T ss_dssp HHHHTCHHHH-HHHHHHHHHHCSSCH
T ss_pred HHHcCCHHHH-HHHHHHHHHcCCCcH
Confidence 8887777655 455888877666543
No 189
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=98.99 E-value=4e-09 Score=97.07 Aligned_cols=132 Identities=7% Similarity=-0.107 Sum_probs=102.7
Q ss_pred HHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHhC
Q 017811 183 DRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGE 262 (365)
Q Consensus 183 ~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~~ 262 (365)
..+...|..+...|++++|+..|++++.+.|.+.. .++.++|.++.+.|++++|+..|+++++.
T Consensus 100 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~----------------~~~~~~~~~~~~~~~~~~A~~~~~~a~~~ 163 (308)
T 2ond_A 100 LLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPT----------------LVYIQYMKFARRAEGIKSGRMIFKKARED 163 (308)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCTH----------------HHHHHHHHHHHHHHCHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHhccccCcc----------------HHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Confidence 34567778888889999999999999998876532 14888888888889999999999999988
Q ss_pred CCCCHHHHHHHHHHHHH-cCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC
Q 017811 263 DENNVKALFRRGKARAE-LGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEIYKGIFGP 331 (365)
Q Consensus 263 ~p~n~ka~~~~g~a~~~-l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~~~~~~~~~k~~y~kmf~~ 331 (365)
+|.+..+|...+..... +|++++|+..|+++++++|++..+...+..+....++.. ..+..|.+.+..
T Consensus 164 ~p~~~~~~~~~a~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~-~A~~~~~~al~~ 232 (308)
T 2ond_A 164 ARTRHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDN-NTRVLFERVLTS 232 (308)
T ss_dssp TTCCTHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCHH-HHHHHHHHHHHS
T ss_pred CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHH-HHHHHHHHHHhc
Confidence 88887777766555433 688999999999999988888888888777765555443 456678888765
No 190
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=98.99 E-value=1.9e-09 Score=98.06 Aligned_cols=122 Identities=16% Similarity=0.097 Sum_probs=103.4
Q ss_pred HHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHh
Q 017811 182 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLG 261 (365)
Q Consensus 182 a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~ 261 (365)
+..+...|..++..|+|.+|+..|++++...|.+.. ....++.++|.+|...|++++|+..+.+++.
T Consensus 5 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~-------------~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~ 71 (338)
T 3ro2_A 5 CLELALEGERLCKSGDCRAGVSFFEAAVQVGTEDLK-------------TLSAIYSQLGNAYFYLHDYAKALEYHHHDLT 71 (338)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHH-------------HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhhCcccHH-------------HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 456778899999999999999999999999877532 1345699999999999999999999999988
Q ss_pred C------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCc------HHHHHHHHHHHHHHHH
Q 017811 262 E------DENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPED------KSIARELRLLAEHEKA 316 (365)
Q Consensus 262 ~------~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n------~~~~~~l~~l~~~~~~ 316 (365)
+ .|....+++.+|.++..+|++++|+..|++++.+.|.. ..+...+..+....++
T Consensus 72 ~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 138 (338)
T 3ro2_A 72 LARTIGDQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGK 138 (338)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhcccccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHcCc
Confidence 7 55668899999999999999999999999999987643 2366667777666666
No 191
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.98 E-value=1.1e-08 Score=91.82 Aligned_cols=126 Identities=14% Similarity=0.005 Sum_probs=62.4
Q ss_pred HHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhh--h------h----hhhHHHHH-------HHhhchhhhHHHHH
Q 017811 182 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMF--Q------L----FGKYRDMA-------LAVKNPCHLNMAAC 242 (365)
Q Consensus 182 a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~--~------~----~~~~~~~~-------~~~~~~~~~nla~~ 242 (365)
+..+...|..++..+++++|+..|+++++ +.+... . . .+...+.. ..-...+++++|.+
T Consensus 6 ~~a~~~lg~~~~~~~~~~~A~~~~~~a~~--~~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~ 83 (273)
T 1ouv_A 6 PKELVGLGAKSYKEKDFTQAKKYFEKACD--LKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNL 83 (273)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH--TTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCCHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 44566677777777777777777777776 222110 0 0 00000000 00012235555555
Q ss_pred HHH----hcCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHH
Q 017811 243 LLK----LKRYEEAIGQCSLVLGEDENNVKALFRRGKARAE----LGQTDAAREDFLKAGKFAPEDKSIARELRLLAEH 313 (365)
Q Consensus 243 ~~k----l~~~~~A~~~~~~aL~~~p~n~ka~~~~g~a~~~----l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~ 313 (365)
|.. .+++++|+.+++++++.+ ++.+++.+|.+|.. .+++++|+.+|+++++++ +..+...+..+...
T Consensus 84 ~~~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~ 158 (273)
T 1ouv_A 84 YYSGQGVSQNTNKALQYYSKACDLK--YAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLN--DGDGCTILGSLYDA 158 (273)
T ss_dssp HHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHH
T ss_pred HhCCCCcccCHHHHHHHHHHHHHcC--CccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcC--cHHHHHHHHHHHHc
Confidence 555 555555555555555542 55555555555555 555555555555555543 34444444444433
No 192
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.97 E-value=1e-08 Score=102.92 Aligned_cols=144 Identities=8% Similarity=-0.052 Sum_probs=119.4
Q ss_pred HHHHHHHhhhhhhhhhhhhhH-HHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcC--------
Q 017811 178 RIGAADRRKMDGNALFKEEKL-EEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKR-------- 248 (365)
Q Consensus 178 ~~~~a~~~k~~G~~~~~~~~y-~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~-------- 248 (365)
+++.-.........+.+.++| ++|+..|.++|.++|+++. ++++++.++.++++
T Consensus 24 k~~~y~~~~~~~~~~~~~~~~~eeal~~~~~~l~~nP~~~t-----------------aW~~R~~~l~~l~~~~~~~~~~ 86 (567)
T 1dce_A 24 KLKLYQSATQAVFQKRQAGELDESVLELTSQILGANPDFAT-----------------LWNCRREVLQHLETEKSPEESA 86 (567)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHHHHTTSCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHCchhHH-----------------HHHHHHHHHHhcccccchhhhh
Confidence 333333333344444555555 4789999999999999755 49999999999999
Q ss_pred --HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHcC--CHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Q 017811 249 --YEEAIGQCSLVLGEDENNVKALFRRGKARAELG--QTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEI 324 (365)
Q Consensus 249 --~~~A~~~~~~aL~~~p~n~ka~~~~g~a~~~l~--~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~~~~~~~~~k~~ 324 (365)
+++++.+++++|+.+|.+..||+.|+.++..++ +|++|+..+.++++++|.|-.++...+.+....+...+.+-+.
T Consensus 87 ~~~~~eL~~~~~~l~~~pK~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d~~N~~aW~~R~~~l~~l~~~~~~el~~ 166 (567)
T 1dce_A 87 ALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAF 166 (567)
T ss_dssp HHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTCCCHHHHHHH
T ss_pred hhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccccHHHHHHHHHHHHhhccccccHHHHHHHHHHHcCCChHHHHHH
Confidence 999999999999999999999999999999999 7799999999999999999999999988877766344567777
Q ss_pred HhcccCCCCCcccc
Q 017811 325 YKGIFGPRPEPKQK 338 (365)
Q Consensus 325 y~kmf~~~~~~~~~ 338 (365)
+.++....+.+...
T Consensus 167 ~~~~I~~~p~n~sa 180 (567)
T 1dce_A 167 TDSLITRNFSNYSS 180 (567)
T ss_dssp HHTTTTTTCCCHHH
T ss_pred HHHHHHHCCCCccH
Confidence 89999888866544
No 193
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.97 E-value=2e-09 Score=101.35 Aligned_cols=122 Identities=16% Similarity=0.097 Sum_probs=104.4
Q ss_pred HHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHh
Q 017811 182 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLG 261 (365)
Q Consensus 182 a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~ 261 (365)
+..+...|..++..|+|.+|+..|++++...|.+.. ....++.++|.+|..+|+|++|+.++++++.
T Consensus 9 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~-------------~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~ 75 (406)
T 3sf4_A 9 CLELALEGERLCKSGDCRAGVSFFEAAVQVGTEDLK-------------TLSAIYSQLGNAYFYLHDYAKALEYHHHDLT 75 (406)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHH-------------HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhcCcccHH-------------HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 456778999999999999999999999999887532 1345699999999999999999999999987
Q ss_pred C------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCc------HHHHHHHHHHHHHHHH
Q 017811 262 E------DENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPED------KSIARELRLLAEHEKA 316 (365)
Q Consensus 262 ~------~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n------~~~~~~l~~l~~~~~~ 316 (365)
+ .|....+++.+|.++..+|++++|+..|++++.+.|.. ..+...++.+....++
T Consensus 76 ~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 142 (406)
T 3sf4_A 76 LARTIGDQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGK 142 (406)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhccccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCC
Confidence 7 45668899999999999999999999999999998753 3366677777776666
No 194
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=98.95 E-value=1.4e-08 Score=93.29 Aligned_cols=119 Identities=12% Similarity=0.082 Sum_probs=101.3
Q ss_pred HHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHH-------hcCH-------HHHHHHHHHHHh-CC
Q 017811 199 EEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLK-------LKRY-------EEAIGQCSLVLG-ED 263 (365)
Q Consensus 199 ~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~k-------l~~~-------~~A~~~~~~aL~-~~ 263 (365)
.+|+..|++|+...|.+.. +++++|..+.. +|++ ++|+..++++++ ++
T Consensus 33 ~~a~~~~~~al~~~p~~~~-----------------~w~~~~~~~~~~~~~l~~~g~~~~~~~~~~~A~~~~~rAl~~~~ 95 (308)
T 2ond_A 33 KRVMFAYEQCLLVLGHHPD-----------------IWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLL 95 (308)
T ss_dssp HHHHHHHHHHHHHHTTCHH-----------------HHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHHHcCCCHH-----------------HHHHHHHHHHHhchhhhhccchhhcccchHHHHHHHHHHHHHhC
Confidence 7899999999999998754 48888888764 5775 899999999999 79
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHH-HHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCc
Q 017811 264 ENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKS-IARELRLLAEHEKAVYKKQKEIYKGIFGPRPEP 335 (365)
Q Consensus 264 p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~-~~~~l~~l~~~~~~~~~~~k~~y~kmf~~~~~~ 335 (365)
|++..+|+.+|.++..+|++++|...|+++++++|.+.. +...+..+..+.+... ..+..|.+.+...|..
T Consensus 96 p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~-~A~~~~~~a~~~~p~~ 167 (308)
T 2ond_A 96 KKNMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIK-SGRMIFKKAREDARTR 167 (308)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHH-HHHHHHHHHHTSTTCC
T ss_pred cccHHHHHHHHHHHHhcCCHHHHHHHHHHHHhccccCccHHHHHHHHHHHHhcCHH-HHHHHHHHHHhcCCCC
Confidence 999999999999999999999999999999999999876 7888888776666554 4567799988876643
No 195
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=98.95 E-value=5.6e-10 Score=104.71 Aligned_cols=103 Identities=10% Similarity=-0.011 Sum_probs=56.9
Q ss_pred HhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHhCC
Q 017811 184 RRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGED 263 (365)
Q Consensus 184 ~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~~~ 263 (365)
.+...|..+++.++|.+|+..|++||.+.|.+. .+|+++|.+|+.+|+|++|+.+++++++++
T Consensus 232 ~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~-----------------~a~~~lg~a~~~~g~~~~A~~~l~~al~l~ 294 (338)
T 2if4_A 232 CHLNIAACLIKLKRYDEAIGHCNIVLTEEEKNP-----------------KALFRRGKAKAELGQMDSARDDFRKAQKYA 294 (338)
T ss_dssp HHHHHHHHHHTTTCCHHHHHHHHHHHHHCTTCH-----------------HHHHHHHHHHHTTTCHHHHHHHHHHTTC--
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH-----------------HHHHHHHHHHHHcCCHHHHHHHHHHHHHHC
Confidence 677899999999999999999999999998763 359999999999999999999999999999
Q ss_pred CCCHHHHHHHHHH-HHHcCCHHHHHHHHHHHHhhCCCcHHH
Q 017811 264 ENNVKALFRRGKA-RAELGQTDAAREDFLKAGKFAPEDKSI 303 (365)
Q Consensus 264 p~n~ka~~~~g~a-~~~l~~~~~A~~~l~~al~l~P~n~~~ 303 (365)
|++..++..++.+ ....+.++.+...|++++.+.|++...
T Consensus 295 p~~~~a~~~L~~l~~~~~~~~~~a~~~~~~~l~~~p~~~~~ 335 (338)
T 2if4_A 295 PDDKAIRRELRALAEQEKALYQKQKEMYKGIFKGKDEGGAK 335 (338)
T ss_dssp -----------------------------------------
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCC
Confidence 9999999999998 445677888999999999999987643
No 196
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=98.94 E-value=2.6e-09 Score=83.65 Aligned_cols=99 Identities=14% Similarity=0.077 Sum_probs=88.1
Q ss_pred hhhhHHHHHHHHhcCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCc-------HHHHHH
Q 017811 234 PCHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPED-------KSIARE 306 (365)
Q Consensus 234 ~~~~nla~~~~kl~~~~~A~~~~~~aL~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n-------~~~~~~ 306 (365)
.+++++|.++...|+|++|+..+.+++..+|.++.+++.+|.++..+|++++|+..|++++.+.|++ ..+...
T Consensus 5 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (131)
T 1elr_A 5 LKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAYAR 84 (131)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHHHHH
Confidence 3589999999999999999999999999999999999999999999999999999999999999877 888888
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccCCCC
Q 017811 307 LRLLAEHEKAVYKKQKEIYKGIFGPRP 333 (365)
Q Consensus 307 l~~l~~~~~~~~~~~k~~y~kmf~~~~ 333 (365)
++.+....++..+. ...|.+++...+
T Consensus 85 la~~~~~~~~~~~A-~~~~~~~~~~~~ 110 (131)
T 1elr_A 85 IGNSYFKEEKYKDA-IHFYNKSLAEHR 110 (131)
T ss_dssp HHHHHHHTTCHHHH-HHHHHHHHHHCC
T ss_pred HHHHHHHhccHHHH-HHHHHHHHHhCC
Confidence 88888777776655 455888877655
No 197
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.94 E-value=4.4e-09 Score=98.95 Aligned_cols=138 Identities=13% Similarity=-0.003 Sum_probs=110.4
Q ss_pred HHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHH
Q 017811 181 AADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVL 260 (365)
Q Consensus 181 ~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL 260 (365)
.+..+...|..++..|+|++|+..|.+++.+.+..... .....++.++|.+|..+|++++|+.++++++
T Consensus 186 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~-----------~~~~~~~~~la~~~~~~g~~~~A~~~~~~al 254 (406)
T 3sf4_A 186 QGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDK-----------AAERRAYSNLGNAYIFLGEFETASEYYKKTL 254 (406)
T ss_dssp HHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHTTCH-----------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcCCc-----------HHHHHHHHHHHHHHHHcCChHHHHHHHHHHH
Confidence 34567788999999999999999999999998763221 1124469999999999999999999999999
Q ss_pred hCCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCc------HHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 017811 261 GEDENN------VKALFRRGKARAELGQTDAAREDFLKAGKFAPED------KSIARELRLLAEHEKAVYKKQKEIYKGI 328 (365)
Q Consensus 261 ~~~p~n------~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n------~~~~~~l~~l~~~~~~~~~~~k~~y~km 328 (365)
.+.|.. ..+++.+|.++..+|++++|+..|++++.+.+.. ..+...++.+....++..++. ..|.+.
T Consensus 255 ~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~-~~~~~a 333 (406)
T 3sf4_A 255 LLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAYTALGNHDQAM-HFAEKH 333 (406)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHH-HHHHHH
T ss_pred HHHHhCcCchHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCCHHHHH-HHHHHH
Confidence 887766 7899999999999999999999999999986643 456667777777666655443 446655
Q ss_pred cC
Q 017811 329 FG 330 (365)
Q Consensus 329 f~ 330 (365)
+.
T Consensus 334 l~ 335 (406)
T 3sf4_A 334 LE 335 (406)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 198
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.94 E-value=4.8e-09 Score=95.56 Aligned_cols=100 Identities=11% Similarity=0.004 Sum_probs=90.6
Q ss_pred hhhHHHHHHHHhcCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHH
Q 017811 235 CHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHE 314 (365)
Q Consensus 235 ~~~nla~~~~kl~~~~~A~~~~~~aL~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~~ 314 (365)
.+.++|.++++.|+|++|+..+++++.++|++..+++.+|.+|..+|+|++|+.+|+++++++|++..+...++.+....
T Consensus 6 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~ 85 (281)
T 2c2l_A 6 ELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQLEM 85 (281)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 58899999999999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred HHHHHHHHHHHhcccCCCCCc
Q 017811 315 KAVYKKQKEIYKGIFGPRPEP 335 (365)
Q Consensus 315 ~~~~~~~k~~y~kmf~~~~~~ 335 (365)
+++.++... |.+.+...|+.
T Consensus 86 g~~~~A~~~-~~~al~l~p~~ 105 (281)
T 2c2l_A 86 ESYDEAIAN-LQRAYSLAKEQ 105 (281)
T ss_dssp TCHHHHHHH-HHHHHHHHHHT
T ss_pred CCHHHHHHH-HHHHHHhCccc
Confidence 877665544 77777665544
No 199
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=98.92 E-value=7.3e-09 Score=100.19 Aligned_cols=123 Identities=14% Similarity=0.139 Sum_probs=72.4
Q ss_pred HHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhh-hh-h-------------------------HHHHH-------
Q 017811 183 DRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQL-FG-K-------------------------YRDMA------- 228 (365)
Q Consensus 183 ~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~-~~-~-------------------------~~~~~------- 228 (365)
..+...|..+...|++.+|+..|.+|++..|.+...-. .+ . .....
T Consensus 248 ~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~ 327 (472)
T 4g1t_A 248 DVLRSAAKFYRRKDEPDKAIELLKKALEYIPNNAYLHCQIGCCYRAKVFQVMNLRENGMYGKRKLLELIGHAVAHLKKAD 327 (472)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCchHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhHHHHHHHHHHHh
Confidence 34667899999999999999999999999998643200 00 0 00000
Q ss_pred --HHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHhCCCCCHH---HHHHHHHH-HHHcCCHHHHHHHHHHHHhhCCCcHH
Q 017811 229 --LAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVK---ALFRRGKA-RAELGQTDAAREDFLKAGKFAPEDKS 302 (365)
Q Consensus 229 --~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~~~p~n~k---a~~~~g~a-~~~l~~~~~A~~~l~~al~l~P~n~~ 302 (365)
......++.++|.+|..+|+|++|+.+|+++|.++|++.. .++++|.. +..+|++++|+..|+++++++|++..
T Consensus 328 ~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~kaL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ai~~y~kal~i~~~~~~ 407 (472)
T 4g1t_A 328 EANDNLFRVCSILASLHALADQYEEAEYYFQKEFSKELTPVAKQLLHLRYGNFQLYQMKCEDKAIHHFIEGVKINQKSRE 407 (472)
T ss_dssp HHCTTTCCCHHHHHHHHHHTTCHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHSCCCCHH
T ss_pred hcCCchhhhhhhHHHHHHHhccHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCcccHH
Confidence 0011234556666666666666666666666666654432 34445443 33556666666666666666666554
Q ss_pred HHH
Q 017811 303 IAR 305 (365)
Q Consensus 303 ~~~ 305 (365)
...
T Consensus 408 ~~~ 410 (472)
T 4g1t_A 408 KEK 410 (472)
T ss_dssp HHH
T ss_pred HHH
Confidence 433
No 200
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.92 E-value=4.2e-09 Score=89.60 Aligned_cols=137 Identities=15% Similarity=0.094 Sum_probs=104.2
Q ss_pred HHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHH
Q 017811 181 AADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVL 260 (365)
Q Consensus 181 ~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL 260 (365)
.+..+...|..++..|+|.+|+..|.+++.+...... ......++.++|.+|..+|++++|+.++.+++
T Consensus 25 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~-----------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al 93 (203)
T 3gw4_A 25 ASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGD-----------HTAEHRALHQVGMVERMAGNWDAARRCFLEER 93 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCC-----------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCC-----------cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 4667888999999999999999999999998754211 11134569999999999999999999999999
Q ss_pred hC---CC----CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC--cH----HHHHHHHHHHHHHHHHHHHHHHHHhc
Q 017811 261 GE---DE----NNVKALFRRGKARAELGQTDAAREDFLKAGKFAPE--DK----SIARELRLLAEHEKAVYKKQKEIYKG 327 (365)
Q Consensus 261 ~~---~p----~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~--n~----~~~~~l~~l~~~~~~~~~~~k~~y~k 327 (365)
.+ .+ ....+++.+|.++..+|++++|+..+++++.+.+. +. .+...+..+....++..+.. ..+.+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~-~~~~~ 172 (203)
T 3gw4_A 94 ELLASLPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQADDQVAIACAFRGLGDLAQQEKNLLEAQ-QHWLR 172 (203)
T ss_dssp HHHHHSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH-HHHHH
T ss_pred HHHHHcCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHCcCHHHHH-HHHHH
Confidence 87 33 33578999999999999999999999999987432 22 22355666666665555443 33444
Q ss_pred cc
Q 017811 328 IF 329 (365)
Q Consensus 328 mf 329 (365)
.+
T Consensus 173 al 174 (203)
T 3gw4_A 173 AR 174 (203)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 201
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=98.91 E-value=6.9e-10 Score=86.95 Aligned_cols=96 Identities=9% Similarity=0.092 Sum_probs=79.8
Q ss_pred HhcCHHHHHHHHHHHHhC---CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHH
Q 017811 245 KLKRYEEAIGQCSLVLGE---DENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQ 321 (365)
Q Consensus 245 kl~~~~~A~~~~~~aL~~---~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~~~~~~~~~ 321 (365)
.+|++++|+..+++++++ +|+++.+++.+|.+|..+|+|++|+..|+++++++|++..+...++.+....++..+..
T Consensus 2 ~~g~~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~ 81 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRYEQGV 81 (117)
T ss_dssp -----CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCHHHHH
Confidence 468999999999999999 69999999999999999999999999999999999999999999999988888877655
Q ss_pred HHHHhcccCCCCCccccchh
Q 017811 322 KEIYKGIFGPRPEPKQKKNW 341 (365)
Q Consensus 322 k~~y~kmf~~~~~~~~~~~~ 341 (365)
. .|.+.+...|.......|
T Consensus 82 ~-~~~~al~~~p~~~~~~~~ 100 (117)
T 3k9i_A 82 E-LLLKIIAETSDDETIQSY 100 (117)
T ss_dssp H-HHHHHHHHHCCCHHHHHT
T ss_pred H-HHHHHHHhCCCcHHHHHH
Confidence 4 488887776665544333
No 202
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=98.91 E-value=4.1e-08 Score=89.52 Aligned_cols=139 Identities=13% Similarity=0.001 Sum_probs=109.8
Q ss_pred HHHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHH
Q 017811 179 IGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSL 258 (365)
Q Consensus 179 ~~~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~ 258 (365)
......+...+..++..|+|++|+..|.+++...+..... ......++++|.++...|++++|+.++.+
T Consensus 72 ~~~~~~l~~~~~~~~~~~~y~~A~~~~~~~l~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~A~~~~~~ 140 (293)
T 2qfc_A 72 IERKKQFKDQVIMLCKQKRYKEIYNKVWNELKKEEYHPEF-----------QQFLQWQYYVAAYVLKKVDYEYCILELKK 140 (293)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCCCHHH-----------HHHHHHHHHHHHHHHTSSCHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHhhhHHHHHHHHHHHhccccCChhH-----------HHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Confidence 3456677889999999999999999999999987653211 11233477899999999999999999999
Q ss_pred HHhCCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHH---hhCCCcH----HHHHHHHHHHHHHHHHHHHHHHHH
Q 017811 259 VLGEDENN------VKALFRRGKARAELGQTDAAREDFLKAG---KFAPEDK----SIARELRLLAEHEKAVYKKQKEIY 325 (365)
Q Consensus 259 aL~~~p~n------~ka~~~~g~a~~~l~~~~~A~~~l~~al---~l~P~n~----~~~~~l~~l~~~~~~~~~~~k~~y 325 (365)
++.+.+.+ ..+++.+|.+|..+|+|++|+..|++++ +..|++. .+...++.+...++++.++..- |
T Consensus 141 al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~-~ 219 (293)
T 2qfc_A 141 LLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQ-V 219 (293)
T ss_dssp HHTTCCCSSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHH-H
T ss_pred HHHHHhcCCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhHHHHHHH-H
Confidence 99876544 6799999999999999999999999999 5566643 4667788887777777655443 5
Q ss_pred hccc
Q 017811 326 KGIF 329 (365)
Q Consensus 326 ~kmf 329 (365)
.+.+
T Consensus 220 ~kal 223 (293)
T 2qfc_A 220 NKAI 223 (293)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5554
No 203
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=98.90 E-value=7.2e-09 Score=83.92 Aligned_cols=107 Identities=21% Similarity=0.140 Sum_probs=90.0
Q ss_pred HHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHh
Q 017811 182 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLG 261 (365)
Q Consensus 182 a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~ 261 (365)
+..+...|..++..|+|.+|+..|.+++.+.+.... ......++.++|.++..+|++++|+.++.+++.
T Consensus 49 ~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~-----------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~ 117 (164)
T 3ro3_A 49 RIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKD-----------RAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLA 117 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC-----------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCC-----------cHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 456778999999999999999999999998765321 112345699999999999999999999999997
Q ss_pred CCC------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Q 017811 262 EDE------NNVKALFRRGKARAELGQTDAAREDFLKAGKFAPE 299 (365)
Q Consensus 262 ~~p------~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~ 299 (365)
+.+ ....+++.+|.++..+|++++|+..+++++.+...
T Consensus 118 ~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 161 (164)
T 3ro3_A 118 IAQELKDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEISRE 161 (164)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHccchHhHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 632 23578999999999999999999999999987654
No 204
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.90 E-value=7.3e-08 Score=89.73 Aligned_cols=136 Identities=14% Similarity=0.047 Sum_probs=113.5
Q ss_pred Hhhhhhhhhhhhhh----------HHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhc--CHHH
Q 017811 184 RRKMDGNALFKEEK----------LEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLK--RYEE 251 (365)
Q Consensus 184 ~~k~~G~~~~~~~~----------y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~--~~~~ 251 (365)
.+.-++..+...+. +.+++..+..+|...|.++. ++++++.++.+++ .|++
T Consensus 66 aWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~~PKny~-----------------aW~hR~wlL~~l~~~~~~~ 128 (331)
T 3dss_A 66 LWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYG-----------------TWHHRCWLLSRLPEPNWAR 128 (331)
T ss_dssp HHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHHCSSCCHHH
T ss_pred HHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHhCCCCHH-----------------HHHHHHHHHhccCcccHHH
Confidence 34445555555444 78999999999999999865 4999999999999 4999
Q ss_pred HHHHHHHHHhCCCCCHHHHHHHHHHHHHcCC-HHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHH-------------HH
Q 017811 252 AIGQCSLVLGEDENNVKALFRRGKARAELGQ-TDAAREDFLKAGKFAPEDKSIARELRLLAEHEK-------------AV 317 (365)
Q Consensus 252 A~~~~~~aL~~~p~n~ka~~~~g~a~~~l~~-~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~~~-------------~~ 317 (365)
++.+|+++|++||.|..||+.++.++..++. +++++..+.++++++|+|..+......+..... ..
T Consensus 129 EL~~~~k~l~~dprNy~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~SAW~~R~~ll~~l~~~~~~~~~~~~~~~~ 208 (331)
T 3dss_A 129 ELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENV 208 (331)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHHSCCC------CCCHHH
T ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhhhccccccccccchHH
Confidence 9999999999999999999999999999999 699999999999999999999999988877661 33
Q ss_pred HHHHHHHHhcccCCCCCcc
Q 017811 318 YKKQKEIYKGIFGPRPEPK 336 (365)
Q Consensus 318 ~~~~k~~y~kmf~~~~~~~ 336 (365)
...+-..+.+.+...|.+.
T Consensus 209 ~~eEle~~~~ai~~~P~d~ 227 (331)
T 3dss_A 209 LLKELELVQNAFFTDPNDQ 227 (331)
T ss_dssp HHHHHHHHHHHHHHSTTCH
T ss_pred HHHHHHHHHHHHHhCCCCH
Confidence 4456666777776666554
No 205
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=98.90 E-value=6e-09 Score=94.76 Aligned_cols=138 Identities=13% Similarity=-0.001 Sum_probs=109.7
Q ss_pred HHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHH
Q 017811 181 AADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVL 260 (365)
Q Consensus 181 ~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL 260 (365)
.+..+...|..++..|++++|+..|.+++.+.+.... ......++.++|.++..+|++++|+..+++++
T Consensus 182 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~-----------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al 250 (338)
T 3ro2_A 182 QGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGD-----------KAAERRAYSNLGNAYIFLGEFETASEYYKKTL 250 (338)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTC-----------HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCC-----------hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 3456778899999999999999999999998765321 11124469999999999999999999999999
Q ss_pred hCCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCc------HHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 017811 261 GEDENN------VKALFRRGKARAELGQTDAAREDFLKAGKFAPED------KSIARELRLLAEHEKAVYKKQKEIYKGI 328 (365)
Q Consensus 261 ~~~p~n------~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n------~~~~~~l~~l~~~~~~~~~~~k~~y~km 328 (365)
.+.+.. ..+++.+|.++..+|++++|+..|++++.+.|.. ..+...+..+....++..+.. ..|.+.
T Consensus 251 ~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~-~~~~~a 329 (338)
T 3ro2_A 251 LLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAM-HFAEKH 329 (338)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHH-HHHHHH
T ss_pred HHHHhhcchhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHH-HHHHHH
Confidence 887665 7899999999999999999999999999987643 335666777776666655444 346655
Q ss_pred cC
Q 017811 329 FG 330 (365)
Q Consensus 329 f~ 330 (365)
+.
T Consensus 330 ~~ 331 (338)
T 3ro2_A 330 LE 331 (338)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 206
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=98.89 E-value=3.5e-09 Score=100.61 Aligned_cols=103 Identities=17% Similarity=0.114 Sum_probs=92.9
Q ss_pred hhhHHHHHHHHhcCHHHHHHHHHHHHh----------------CCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC
Q 017811 235 CHLNMAACLLKLKRYEEAIGQCSLVLG----------------EDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAP 298 (365)
Q Consensus 235 ~~~nla~~~~kl~~~~~A~~~~~~aL~----------------~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P 298 (365)
.+.++|.++++.|+|++|+..|+++|+ ++|.+..+|+++|.+|..+++|++|+.+++++++++|
T Consensus 225 ~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p 304 (370)
T 1ihg_A 225 DLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEIDP 304 (370)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCT
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhCc
Confidence 488999999999999999999999998 8888999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCcccc
Q 017811 299 EDKSIARELRLLAEHEKAVYKKQKEIYKGIFGPRPEPKQK 338 (365)
Q Consensus 299 ~n~~~~~~l~~l~~~~~~~~~~~k~~y~kmf~~~~~~~~~ 338 (365)
++..+...++.+...++++.++.. .|.+.+...|.....
T Consensus 305 ~~~~a~~~lg~~~~~~g~~~eA~~-~l~~Al~l~P~~~~~ 343 (370)
T 1ihg_A 305 SNTKALYRRAQGWQGLKEYDQALA-DLKKAQEIAPEDKAI 343 (370)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHH-HHHHHHHHCTTCHHH
T ss_pred hhHHHHHHHHHHHHHccCHHHHHH-HHHHHHHhCCCCHHH
Confidence 999999999999888888776654 588888887765433
No 207
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=98.88 E-value=1.7e-08 Score=93.18 Aligned_cols=115 Identities=10% Similarity=-0.133 Sum_probs=78.1
Q ss_pred HHHhhhhhhhhhhhh--hHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHH----HHh---cCHHHH
Q 017811 182 ADRRKMDGNALFKEE--KLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACL----LKL---KRYEEA 252 (365)
Q Consensus 182 a~~~k~~G~~~~~~~--~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~----~kl---~~~~~A 252 (365)
...+..+|..+...+ ++.+|+..+..+|..+|.++. +++.++.++ ..+ +++.++
T Consensus 67 ~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk~y~-----------------aW~~R~~iL~~~~~~l~~~~~~~~E 129 (306)
T 3dra_A 67 YTIWIYRFNILKNLPNRNLYDELDWCEEIALDNEKNYQ-----------------IWNYRQLIIGQIMELNNNDFDPYRE 129 (306)
T ss_dssp HHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTTCCH-----------------HHHHHHHHHHHHHHHTTTCCCTHHH
T ss_pred HHHHHHHHHHHHHcccccHHHHHHHHHHHHHHCcccHH-----------------HHHHHHHHHHHHHHhccccCCHHHH
Confidence 345667888888888 999999999999999998654 355666665 444 556666
Q ss_pred HHHHHHHHhCCCCCHHHHHHHHHHHHHcCCHH--HHHHHHHHHHhhCCCcHHHHHHHHHHHHH
Q 017811 253 IGQCSLVLGEDENNVKALFRRGKARAELGQTD--AAREDFLKAGKFAPEDKSIARELRLLAEH 313 (365)
Q Consensus 253 ~~~~~~aL~~~p~n~ka~~~~g~a~~~l~~~~--~A~~~l~~al~l~P~n~~~~~~l~~l~~~ 313 (365)
+..|+++|+.+|.|..|++.|+.++..++.++ +++..+.++++++|.|-.+......+...
T Consensus 130 L~~~~~~l~~~pkny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N~sAW~~R~~ll~~ 192 (306)
T 3dra_A 130 FDILEAMLSSDPKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNNSAWSHRFFLLFS 192 (306)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Confidence 66666666666666666666666666666666 66666666666666666666555555443
No 208
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=98.87 E-value=4.1e-09 Score=99.97 Aligned_cols=140 Identities=11% Similarity=0.026 Sum_probs=109.4
Q ss_pred HHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHh
Q 017811 182 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLG 261 (365)
Q Consensus 182 a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~ 261 (365)
+..+...|..++..|+|++|+..|.+++.+.+.... ......++.++|.+|..+|++++|+.++++++.
T Consensus 223 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~-----------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 291 (411)
T 4a1s_A 223 GRACGNLGNTYYLLGDFQAAIEHHQERLRIAREFGD-----------RAAERRANSNLGNSHIFLGQFEDAAEHYKRTLA 291 (411)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTC-----------HHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhcCC-----------cHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHH
Confidence 345667899999999999999999999999875321 111244689999999999999999999999998
Q ss_pred CCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCc------HHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 017811 262 EDENN------VKALFRRGKARAELGQTDAAREDFLKAGKFAPED------KSIARELRLLAEHEKAVYKKQKEIYKGIF 329 (365)
Q Consensus 262 ~~p~n------~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n------~~~~~~l~~l~~~~~~~~~~~k~~y~kmf 329 (365)
+.+.. ..+++.+|.++..+|++++|+..|++++.+.+.. ..+...+..+....++..++ ...|.+.+
T Consensus 292 ~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A-~~~~~~al 370 (411)
T 4a1s_A 292 LAVELGEREVEAQSCYSLGNTYTLLHEFNTAIEYHNRHLAIAQELGDRIGEARACWSLGNAHSAIGGHERA-LKYAEQHL 370 (411)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHH-HHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHhccHHHH-HHHHHHHH
Confidence 87754 7899999999999999999999999999986543 34666677776666665443 34466655
Q ss_pred CCCC
Q 017811 330 GPRP 333 (365)
Q Consensus 330 ~~~~ 333 (365)
...+
T Consensus 371 ~~~~ 374 (411)
T 4a1s_A 371 QLAX 374 (411)
T ss_dssp HHCC
T ss_pred HHHh
Confidence 4433
No 209
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=98.86 E-value=2.7e-09 Score=104.82 Aligned_cols=106 Identities=17% Similarity=0.008 Sum_probs=95.1
Q ss_pred chhhhHHHHHHHHhcCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHH
Q 017811 233 NPCHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAE 312 (365)
Q Consensus 233 ~~~~~nla~~~~kl~~~~~A~~~~~~aL~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~ 312 (365)
...+.++|.++++.|+|++|+..++++++++|++..+++.+|.+|..+|+|++|+..|+++++++|++..+...++.+..
T Consensus 6 a~~~~~lg~~~~~~g~~~~A~~~~~~Al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~ 85 (477)
T 1wao_1 6 AEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNM 85 (477)
T ss_dssp HTTSSSSSSSTTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 34588999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHHHhcccCCCCCccccc
Q 017811 313 HEKAVYKKQKEIYKGIFGPRPEPKQKK 339 (365)
Q Consensus 313 ~~~~~~~~~k~~y~kmf~~~~~~~~~~ 339 (365)
.++++.++.. .|++.+...|......
T Consensus 86 ~~g~~~eA~~-~~~~al~~~p~~~~~~ 111 (477)
T 1wao_1 86 ALGKFRAALR-DYETVVKVKPHDKDAK 111 (477)
T ss_dssp HHTCHHHHHH-HHHHHHHHSTTCTTHH
T ss_pred HcCCHHHHHH-HHHHHHHhCCCCHHHH
Confidence 8888776654 4888887777655443
No 210
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.84 E-value=3.1e-08 Score=95.92 Aligned_cols=124 Identities=11% Similarity=0.036 Sum_probs=94.6
Q ss_pred HHHHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHH
Q 017811 178 RIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCS 257 (365)
Q Consensus 178 ~~~~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~ 257 (365)
.+..+....+.+...-..|+|++|+..|+++|.+....... + .......+.|||.+|..+|+|++|+.++.
T Consensus 294 ~~~~~~~~le~~~~~~~~g~~~eA~~~~~~~L~i~~~~lg~----~-----Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~ 364 (433)
T 3qww_A 294 MVRYARNVIEEFRRAKHYKSPSELLEICELSQEKMSSVFED----S-----NVYMLHMMYQAMGVCLYMQDWEGALKYGQ 364 (433)
T ss_dssp HHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHTTTBCT----T-----SHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHHHhhCccCh----h-----chHHHHHHHHHHHHHHhhcCHHHHHHHHH
Confidence 34444555555555566789999999999999986432110 0 01124569999999999999999999999
Q ss_pred HHHhC-----CCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHhh-----CCCcHHHHHHHHHH
Q 017811 258 LVLGE-----DENN---VKALFRRGKARAELGQTDAAREDFLKAGKF-----APEDKSIARELRLL 310 (365)
Q Consensus 258 ~aL~~-----~p~n---~ka~~~~g~a~~~l~~~~~A~~~l~~al~l-----~P~n~~~~~~l~~l 310 (365)
++|.+ .|++ ...|+++|.+|..+|+|++|+..|++|+.+ -|+++.+......+
T Consensus 365 ~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~l~~~l 430 (433)
T 3qww_A 365 KIIKPYSKHYPVYSLNVASMWLKLGRLYMGLENKAAGEKALKKAIAIMEVAHGKDHPYISEIKQEI 430 (433)
T ss_dssp HHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCChHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHH
Confidence 99964 3444 568999999999999999999999999986 57888777655443
No 211
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=98.84 E-value=6.5e-09 Score=85.99 Aligned_cols=94 Identities=13% Similarity=0.134 Sum_probs=83.5
Q ss_pred HHHhcCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHcCCH----------HHHHHHHHHHHhhCCCcHHHHHHHHHHHH
Q 017811 243 LLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQT----------DAAREDFLKAGKFAPEDKSIARELRLLAE 312 (365)
Q Consensus 243 ~~kl~~~~~A~~~~~~aL~~~p~n~ka~~~~g~a~~~l~~~----------~~A~~~l~~al~l~P~n~~~~~~l~~l~~ 312 (365)
.-+++.|++|+..++++++++|+++.+|+++|.++..++++ ++|+..|++|++++|++..+...++.+..
T Consensus 12 ~~r~~~feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~ 91 (158)
T 1zu2_A 12 FDRILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYT 91 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHH
Confidence 34678899999999999999999999999999999999876 59999999999999999999999999988
Q ss_pred HHH----------HHHHHHHHHHhcccCCCCCcc
Q 017811 313 HEK----------AVYKKQKEIYKGIFGPRPEPK 336 (365)
Q Consensus 313 ~~~----------~~~~~~k~~y~kmf~~~~~~~ 336 (365)
.+. ...++....|++.+...|+..
T Consensus 92 ~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~ 125 (158)
T 1zu2_A 92 SFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNT 125 (158)
T ss_dssp HHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCH
T ss_pred HhcccCcchhhhhccHHHHHHHHHHHHHhCCCCH
Confidence 775 355666777999998888754
No 212
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.84 E-value=6e-08 Score=86.93 Aligned_cols=95 Identities=9% Similarity=0.015 Sum_probs=81.0
Q ss_pred hhhhHHHHHHHH----hcCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhCCCcHHHHH
Q 017811 234 PCHLNMAACLLK----LKRYEEAIGQCSLVLGEDENNVKALFRRGKARAE----LGQTDAAREDFLKAGKFAPEDKSIAR 305 (365)
Q Consensus 234 ~~~~nla~~~~k----l~~~~~A~~~~~~aL~~~p~n~ka~~~~g~a~~~----l~~~~~A~~~l~~al~l~P~n~~~~~ 305 (365)
.+++++|.+|.. .+++++|+.+++++++.+ +..+++++|.+|.. .+++++|+..|++++++. +..+..
T Consensus 111 ~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~--~~~a~~ 186 (273)
T 1ouv_A 111 EGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLN--DGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLK--DSPGCF 186 (273)
T ss_dssp HHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHH
T ss_pred cHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcC--cHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCC--CHHHHH
Confidence 468999999999 999999999999999986 78999999999999 999999999999999874 578888
Q ss_pred HHHHHHHH----HHHHHHHHHHHHhcccCCCC
Q 017811 306 ELRLLAEH----EKAVYKKQKEIYKGIFGPRP 333 (365)
Q Consensus 306 ~l~~l~~~----~~~~~~~~k~~y~kmf~~~~ 333 (365)
.+..+... .++..+. ...|.+.+...+
T Consensus 187 ~lg~~~~~g~~~~~~~~~A-~~~~~~a~~~~~ 217 (273)
T 1ouv_A 187 NAGNMYHHGEGATKNFKEA-LARYSKACELEN 217 (273)
T ss_dssp HHHHHHHHTCSSCCCHHHH-HHHHHHHHHTTC
T ss_pred HHHHHHHcCCCCCccHHHH-HHHHHHHHhCCC
Confidence 88888777 6665544 455777776533
No 213
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.83 E-value=1.8e-08 Score=91.55 Aligned_cols=108 Identities=16% Similarity=0.076 Sum_probs=74.2
Q ss_pred HhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHhCC
Q 017811 184 RRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGED 263 (365)
Q Consensus 184 ~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~~~ 263 (365)
.....|..+++.++|.+|+..|+.++...+.. +...+++++|.++..+|++++|+..|.+++...
T Consensus 137 ~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~---------------~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~ 201 (282)
T 4f3v_A 137 VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKF---------------LAGAAGVAHGVAAANLALFTEAERRLTEANDSP 201 (282)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHH---------------HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTST
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcc---------------cHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCC
Confidence 45666677777777777777776554432110 112357778888888888888888888877544
Q ss_pred --CC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHH
Q 017811 264 --EN-NVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIAREL 307 (365)
Q Consensus 264 --p~-n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l 307 (365)
|. ...+++++|.|+..+|+.++|...|++++..+|+ ..+...|
T Consensus 202 ~~P~~~~da~~~~glaL~~lGr~deA~~~l~~a~a~~P~-~~~~~aL 247 (282)
T 4f3v_A 202 AGEACARAIAWYLAMARRSQGNESAAVALLEWLQTTHPE-PKVAAAL 247 (282)
T ss_dssp TTTTTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSCC-HHHHHHH
T ss_pred CCccccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc-HHHHHHH
Confidence 54 5667788888888888888888888888888887 6665555
No 214
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.83 E-value=1.3e-08 Score=88.51 Aligned_cols=111 Identities=9% Similarity=-0.020 Sum_probs=79.5
Q ss_pred HHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhc----CHHHHHHHH
Q 017811 181 AADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLK----RYEEAIGQC 256 (365)
Q Consensus 181 ~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~----~~~~A~~~~ 256 (365)
.+..+...|..++..+++.+|+..|++|++... ..++++||.+|.. + ++++|+.++
T Consensus 17 ~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~g~-------------------~~a~~~lg~~y~~-~g~~~~~~~A~~~~ 76 (212)
T 3rjv_A 17 DRRAQYYLADTWVSSGDYQKAEYWAQKAAAQGD-------------------GDALALLAQLKIR-NPQQADYPQARQLA 76 (212)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTC-------------------HHHHHHHHHHTTS-STTSCCHHHHHHHH
T ss_pred CHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCC-------------------HHHHHHHHHHHHc-CCCCCCHHHHHHHH
Confidence 456678899999999999999999999987632 1236677777766 5 677777777
Q ss_pred HHHHhCCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhCCC--cHHHHHHHHHHHHH
Q 017811 257 SLVLGEDENNVKALFRRGKARAE----LGQTDAAREDFLKAGKFAPE--DKSIARELRLLAEH 313 (365)
Q Consensus 257 ~~aL~~~p~n~ka~~~~g~a~~~----l~~~~~A~~~l~~al~l~P~--n~~~~~~l~~l~~~ 313 (365)
+++++ +.++.+++.+|.+|.. .+++++|+.+|+++++..|. ++.+...|..+...
T Consensus 77 ~~A~~--~g~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~ 137 (212)
T 3rjv_A 77 EKAVE--AGSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYAS 137 (212)
T ss_dssp HHHHH--TTCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHH
T ss_pred HHHHH--CCCHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHc
Confidence 77743 4567777777777776 67777777777777777663 46666666666554
No 215
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.82 E-value=6.1e-08 Score=90.78 Aligned_cols=130 Identities=12% Similarity=0.039 Sum_probs=111.6
Q ss_pred hhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhc-CHHHHHHHHHHHHhCCCCCHHHH
Q 017811 192 LFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLK-RYEEAIGQCSLVLGEDENNVKAL 270 (365)
Q Consensus 192 ~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~-~~~~A~~~~~~aL~~~p~n~ka~ 270 (365)
+.+.+...+|+..+.++|.++|.++. +++.++.++..++ .+++++..++.+|..+|.|..++
T Consensus 64 ~~~~e~se~AL~lt~~~L~~nP~~yt-----------------aWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~aW 126 (349)
T 3q7a_A 64 AAKEEKSERALELTEIIVRMNPAHYT-----------------VWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQVW 126 (349)
T ss_dssp HHTTCCSHHHHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHHHH
T ss_pred HHhCCCCHHHHHHHHHHHHhCchhHH-----------------HHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHHHH
Confidence 33445557899999999999999755 4999999999999 59999999999999999999999
Q ss_pred HHHHHHHHHc-C-CHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHH-------HHHHHHHhcccCCCCCcccc
Q 017811 271 FRRGKARAEL-G-QTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVY-------KKQKEIYKGIFGPRPEPKQK 338 (365)
Q Consensus 271 ~~~g~a~~~l-~-~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~~~~~~-------~~~k~~y~kmf~~~~~~~~~ 338 (365)
+.|+.++..+ + ++++++..+.++++++|+|-.+....+.+........ ..+-..+.++++..+.+...
T Consensus 127 ~hR~wlL~~l~~~~~~~EL~~~~k~L~~dpkNy~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~dp~N~SA 203 (349)
T 3q7a_A 127 HHRLLLLDRISPQDPVSEIEYIHGSLLPDPKNYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRVDGRNNSA 203 (349)
T ss_dssp HHHHHHHHHHCCSCCHHHHHHHHHHTSSCTTCHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHhCCCCHHH
Confidence 9999999998 8 9999999999999999999999999888877776655 36677788888777654433
No 216
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=98.80 E-value=1.7e-08 Score=93.15 Aligned_cols=132 Identities=9% Similarity=-0.096 Sum_probs=114.5
Q ss_pred Hhhhhhhhh----hhh---hhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHH--HHHH
Q 017811 184 RRKMDGNAL----FKE---EKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYE--EAIG 254 (365)
Q Consensus 184 ~~k~~G~~~----~~~---~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~--~A~~ 254 (365)
.+..++..+ ... +++.+++..+.+++...|.++. ++++++.+..+++.++ +++.
T Consensus 105 aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~pkny~-----------------aW~~R~~vl~~l~~~~~~~EL~ 167 (306)
T 3dra_A 105 IWNYRQLIIGQIMELNNNDFDPYREFDILEAMLSSDPKNHH-----------------VWSYRKWLVDTFDLHNDAKELS 167 (306)
T ss_dssp HHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHHCTTCHH-----------------HHHHHHHHHHHTTCTTCHHHHH
T ss_pred HHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhCCCCHH-----------------HHHHHHHHHHHhcccChHHHHH
Confidence 344556655 444 7899999999999999999855 4999999999999999 9999
Q ss_pred HHHHHHhCCCCCHHHHHHHHHHHHHcCC------HHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 017811 255 QCSLVLGEDENNVKALFRRGKARAELGQ------TDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEIYKGI 328 (365)
Q Consensus 255 ~~~~aL~~~p~n~ka~~~~g~a~~~l~~------~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~~~~~~~~~k~~y~km 328 (365)
+|+++|+.+|.|..|++.|+.++..++. +++++..+.+++.++|+|..+...++.+....+.........+.++
T Consensus 168 ~~~~~i~~d~~N~sAW~~R~~ll~~l~~~~~~~~~~eEl~~~~~aI~~~p~n~SaW~y~~~ll~~~~~~~~~~~~~~~~~ 247 (306)
T 3dra_A 168 FVDKVIDTDLKNNSAWSHRFFLLFSKKHLATDNTIDEELNYVKDKIVKCPQNPSTWNYLLGIHERFDRSITQLEEFSLQF 247 (306)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHSSGGGCCHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCCGGGGHHHHHTT
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHHhCCCCccHHHHHHHHHHhcCCChHHHHHHHHHH
Confidence 9999999999999999999999999998 9999999999999999999999999988877766556666677777
Q ss_pred cCCC
Q 017811 329 FGPR 332 (365)
Q Consensus 329 f~~~ 332 (365)
+...
T Consensus 248 ~~~~ 251 (306)
T 3dra_A 248 VDLE 251 (306)
T ss_dssp EEGG
T ss_pred Hhcc
Confidence 6543
No 217
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.79 E-value=4.9e-08 Score=90.89 Aligned_cols=130 Identities=8% Similarity=-0.041 Sum_probs=110.8
Q ss_pred hhhhhhHH-HHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcC----------HHHHHHHHHHHH
Q 017811 192 LFKEEKLE-EAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKR----------YEEAIGQCSLVL 260 (365)
Q Consensus 192 ~~~~~~y~-~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~----------~~~A~~~~~~aL 260 (365)
..+.|.|. +|+..+.++|.++|.++. +++.++.+...++. +.+++..++.+|
T Consensus 39 ~~~~~e~s~eaL~~t~~~L~~nP~~yt-----------------aWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L 101 (331)
T 3dss_A 39 KRQAGELDESVLELTSQILGANPDFAT-----------------LWNCRREVLQHLETEKSPEESAALVKAELGFLESCL 101 (331)
T ss_dssp HHHTTCCSHHHHHHHHHHHTTCTTCHH-----------------HHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCCCHHHHHHHHHHHHHCchhHH-----------------HHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHH
Confidence 34567776 799999999999999754 48889999988876 789999999999
Q ss_pred hCCCCCHHHHHHHHHHHHHcCC--HHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCcccc
Q 017811 261 GEDENNVKALFRRGKARAELGQ--TDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEIYKGIFGPRPEPKQK 338 (365)
Q Consensus 261 ~~~p~n~ka~~~~g~a~~~l~~--~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~~~~~~~~~k~~y~kmf~~~~~~~~~ 338 (365)
..+|.|..+|+.|+.++..++. +++++..+.++++++|.|-.+......+....+...+.+-..+.+++...|.+...
T Consensus 102 ~~~PKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dprNy~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~SA 181 (331)
T 3dss_A 102 RVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSS 181 (331)
T ss_dssp HHCTTCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCHHH
T ss_pred HhCCCCHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCHHH
Confidence 9999999999999999999994 99999999999999999999999988887666553356667788888777765544
No 218
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.78 E-value=2.7e-08 Score=86.54 Aligned_cols=111 Identities=15% Similarity=0.088 Sum_probs=94.5
Q ss_pred HHHhhhhhhhhhhhh----hHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHH----hcCHHHHH
Q 017811 182 ADRRKMDGNALFKEE----KLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLK----LKRYEEAI 253 (365)
Q Consensus 182 a~~~k~~G~~~~~~~----~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~k----l~~~~~A~ 253 (365)
+..+...|..+.. + ++.+|+..|++|++. .+ ..++++||.+|.. .+++.+|+
T Consensus 50 ~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~~--g~-----------------~~a~~~Lg~~y~~g~g~~~d~~~A~ 109 (212)
T 3rjv_A 50 GDALALLAQLKIR-NPQQADYPQARQLAEKAVEA--GS-----------------KSGEIVLARVLVNRQAGATDVAHAI 109 (212)
T ss_dssp HHHHHHHHHHTTS-STTSCCHHHHHHHHHHHHHT--TC-----------------HHHHHHHHHHHTCGGGSSCCHHHHH
T ss_pred HHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHHC--CC-----------------HHHHHHHHHHHHcCCCCccCHHHHH
Confidence 3456678888887 6 899999999999764 22 2358999999998 89999999
Q ss_pred HHHHHHHhCCC--CCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHH
Q 017811 254 GQCSLVLGEDE--NNVKALFRRGKARAE----LGQTDAAREDFLKAGKFAPEDKSIARELRLLAEH 313 (365)
Q Consensus 254 ~~~~~aL~~~p--~n~ka~~~~g~a~~~----l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~ 313 (365)
.++.++++..| .++.+++++|.+|.. .+++++|+.+|++++++ |.+..+...|..+...
T Consensus 110 ~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~-~~~~~a~~~Lg~~y~~ 174 (212)
T 3rjv_A 110 TLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL-SRTGYAEYWAGMMFQQ 174 (212)
T ss_dssp HHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT-SCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHc
Confidence 99999999998 469999999999999 89999999999999998 6777788888877643
No 219
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.76 E-value=5.3e-08 Score=91.21 Aligned_cols=137 Identities=8% Similarity=-0.104 Sum_probs=117.4
Q ss_pred HHhhhhhhhhhhhh-hHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHh-c-CHHHHHHHHHHH
Q 017811 183 DRRKMDGNALFKEE-KLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKL-K-RYEEAIGQCSLV 259 (365)
Q Consensus 183 ~~~k~~G~~~~~~~-~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl-~-~~~~A~~~~~~a 259 (365)
..+..+|..+...+ .+.+++..+..+|..+|.++. +++.++.++.++ + ++++++..|+++
T Consensus 89 taWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~-----------------aW~hR~wlL~~l~~~~~~~EL~~~~k~ 151 (349)
T 3q7a_A 89 TVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQ-----------------VWHHRLLLLDRISPQDPVSEIEYIHGS 151 (349)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHH-----------------HHHHHHHHHHHHCCSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHH-----------------HHHHHHHHHHHhcCCChHHHHHHHHHH
Confidence 35667888888888 599999999999999999855 499999999998 8 999999999999
Q ss_pred HhCCCCCHHHHHHHHHHHHHcCCHH--------HHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHH------HHHHHHHHH
Q 017811 260 LGEDENNVKALFRRGKARAELGQTD--------AAREDFLKAGKFAPEDKSIARELRLLAEHEKA------VYKKQKEIY 325 (365)
Q Consensus 260 L~~~p~n~ka~~~~g~a~~~l~~~~--------~A~~~l~~al~l~P~n~~~~~~l~~l~~~~~~------~~~~~k~~y 325 (365)
|+++|.|..|++.|+.++..++.++ +++..+.++++++|.|-.+......+...... ..+.+-..+
T Consensus 152 L~~dpkNy~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~dp~N~SAW~~R~~lL~~l~~~~~~~~~~~eELe~~ 231 (349)
T 3q7a_A 152 LLPDPKNYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRVDGRNNSAWGWRWYLRVSRPGAETSSRSLQDELIYI 231 (349)
T ss_dssp TSSCTTCHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHTTSTTCCCCHHHHHHHHHHH
T ss_pred HHhCCCCHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccccccchHHHHHHHHHH
Confidence 9999999999999999999999998 99999999999999999999998888665442 234566667
Q ss_pred hcccCCCCCcc
Q 017811 326 KGIFGPRPEPK 336 (365)
Q Consensus 326 ~kmf~~~~~~~ 336 (365)
.+++...|.+.
T Consensus 232 ~~aI~~~P~n~ 242 (349)
T 3q7a_A 232 LKSIHLIPHNV 242 (349)
T ss_dssp HHHHHHCTTCH
T ss_pred HHHHHhCCCCH
Confidence 77776666544
No 220
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.76 E-value=1e-07 Score=92.24 Aligned_cols=125 Identities=14% Similarity=0.041 Sum_probs=95.8
Q ss_pred HHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHH
Q 017811 181 AADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVL 260 (365)
Q Consensus 181 ~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL 260 (365)
.+......-..+..+|+|++|+..|++++.+....... + ......++.|+|.+|..+|+|++|+.+|.++|
T Consensus 286 ~~~~ll~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~----~-----h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L 356 (429)
T 3qwp_A 286 EVQESLKKIEELKAHWKWEQVLAMCQAIISSNSERLPD----I-----NIYQLKVLDCAMDACINLGLLEEALFYGTRTM 356 (429)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCSSCCCCT----T-----SHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhccHHHHHHHHHHHHHhccCcCCc----c-----chHHHHHHHHHHHHHHhhccHHHHHHHHHHHH
Confidence 34444555566778899999999999999875431110 0 01135569999999999999999999999999
Q ss_pred hC-----CCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHhh-----CCCcHHHHHHHHHHHHHH
Q 017811 261 GE-----DENN---VKALFRRGKARAELGQTDAAREDFLKAGKF-----APEDKSIARELRLLAEHE 314 (365)
Q Consensus 261 ~~-----~p~n---~ka~~~~g~a~~~l~~~~~A~~~l~~al~l-----~P~n~~~~~~l~~l~~~~ 314 (365)
.+ .|++ ...++++|.+|..+|+|++|+..|++|+.+ -|+++.+...+..+....
T Consensus 357 ~i~~~~lg~~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~ 423 (429)
T 3qwp_A 357 EPYRIFFPGSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHGREHSLIEDLILLLEECD 423 (429)
T ss_dssp HHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHH
T ss_pred HhHHHHcCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHH
Confidence 54 3444 468999999999999999999999999985 578887777665554433
No 221
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.71 E-value=8.5e-08 Score=73.70 Aligned_cols=78 Identities=15% Similarity=0.029 Sum_probs=70.2
Q ss_pred hhHHHHHHHHhcCHHHHHHHHHHHHhCC-------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHH
Q 017811 236 HLNMAACLLKLKRYEEAIGQCSLVLGED-------ENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELR 308 (365)
Q Consensus 236 ~~nla~~~~kl~~~~~A~~~~~~aL~~~-------p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~ 308 (365)
++.+|..++..++|..|+..+..|+... +..+..++.+|.++..+|+++.|+..+++++.++|++..+...+.
T Consensus 8 c~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~n~~ 87 (104)
T 2v5f_A 8 CFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANGNLK 87 (104)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHhhHH
Confidence 7899999999999999999999999753 356889999999999999999999999999999999999987777
Q ss_pred HHHHH
Q 017811 309 LLAEH 313 (365)
Q Consensus 309 ~l~~~ 313 (365)
.+...
T Consensus 88 ~~~~~ 92 (104)
T 2v5f_A 88 YFEYI 92 (104)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55443
No 222
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.68 E-value=4.3e-08 Score=89.02 Aligned_cols=131 Identities=15% Similarity=0.054 Sum_probs=108.3
Q ss_pred hhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHhCCC
Q 017811 185 RKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGEDE 264 (365)
Q Consensus 185 ~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~~~p 264 (365)
....+..+...|+|++|...|..++...|.+ . +++++|.++++.++|++|+..++.++...+
T Consensus 105 ~LayA~~L~~~g~y~eA~~~l~~~~~~~p~~-----------------~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d 166 (282)
T 4f3v_A 105 TMGFAACEAAQGNYADAMEALEAAPVAGSEH-----------------L-VAWMKAVVYGAAERWTDVIDQVKSAGKWPD 166 (282)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHTSSCCTTCHH-----------------H-HHHHHHHHHHHTTCHHHHHHHHTTGGGCSC
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHhcCCch-----------------H-HHHHHHHHHHHcCCHHHHHHHHHHhhccCC
Confidence 4456788888999999999999988766653 2 489999999999999999999999988642
Q ss_pred CC--HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC--CC-cHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCC
Q 017811 265 NN--VKALFRRGKARAELGQTDAAREDFLKAGKFA--PE-DKSIARELRLLAEHEKAVYKKQKEIYKGIFGPRPE 334 (365)
Q Consensus 265 ~n--~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~--P~-n~~~~~~l~~l~~~~~~~~~~~k~~y~kmf~~~~~ 334 (365)
.. ..++|.+|.++..+|++++|+..|++++.-. |. ..++...+..+...+++.. +.+..|++++...|.
T Consensus 167 ~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~lGr~d-eA~~~l~~a~a~~P~ 240 (282)
T 4f3v_A 167 KFLAGAAGVAHGVAAANLALFTEAERRLTEANDSPAGEACARAIAWYLAMARRSQGNES-AAVALLEWLQTTHPE 240 (282)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHHHTCHH-HHHHHHHHHHHHSCC
T ss_pred cccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHcCCHH-HHHHHHHHHHhcCCc
Confidence 22 4589999999999999999999999998654 65 6678888888877777665 555669999988886
No 223
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=98.66 E-value=6.7e-08 Score=73.42 Aligned_cols=84 Identities=14% Similarity=0.100 Sum_probs=69.1
Q ss_pred HHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHH
Q 017811 181 AADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVL 260 (365)
Q Consensus 181 ~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL 260 (365)
.+..+...|..++..|+|++|+..|++++++.|.+.. +++++|.||..+|++++|+..+++++
T Consensus 6 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~-----------------a~~~lg~~~~~~g~~~~A~~~~~~al 68 (100)
T 3ma5_A 6 DPFTRYALAQEHLKHDNASRALALFEELVETDPDYVG-----------------TYYHLGKLYERLDRTDDAIDTYAQGI 68 (100)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTH-----------------HHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHH-----------------HHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 3567889999999999999999999999999998644 49999999999999999999999999
Q ss_pred hCCCC--CHHHHHHHHHHHHHcC
Q 017811 261 GEDEN--NVKALFRRGKARAELG 281 (365)
Q Consensus 261 ~~~p~--n~ka~~~~g~a~~~l~ 281 (365)
++.|. +..+...+..++...+
T Consensus 69 ~l~~~~~~~~~~~~l~~~l~~~~ 91 (100)
T 3ma5_A 69 EVAREEGTQKDLSELQDAKLKAE 91 (100)
T ss_dssp HHHHHHSCHHHHHHHHHHHHHHH
T ss_pred hhhhcCCchhHHHHHHHHHHHcc
Confidence 98763 4455445555544433
No 224
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.65 E-value=1.7e-07 Score=70.60 Aligned_cols=67 Identities=13% Similarity=-0.066 Sum_probs=62.2
Q ss_pred hhhHHHHHHHHhcC---HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcH
Q 017811 235 CHLNMAACLLKLKR---YEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDK 301 (365)
Q Consensus 235 ~~~nla~~~~kl~~---~~~A~~~~~~aL~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~ 301 (365)
++..+|.+++..++ .++|...++++|.+||+++.+++.+|.+++..|+|++|+..+++++..+|.++
T Consensus 8 ~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~~ 77 (93)
T 3bee_A 8 QLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPNL 77 (93)
T ss_dssp HHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTTC
T ss_pred HHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCc
Confidence 48889999976666 79999999999999999999999999999999999999999999999999853
No 225
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.63 E-value=3.3e-07 Score=90.62 Aligned_cols=135 Identities=7% Similarity=-0.085 Sum_probs=111.1
Q ss_pred HhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHhCC
Q 017811 184 RRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGED 263 (365)
Q Consensus 184 ~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~~~ 263 (365)
.+...|..+.+.|++++|...|++++.+.|.+.. .++.+++.++.+.|++++|+..+.++++..
T Consensus 323 l~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~----------------~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~ 386 (530)
T 2ooe_A 323 LYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPT----------------LVYIQYMKFARRAEGIKSGRMIFKKAREDA 386 (530)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHSSSSCHH----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHTCT
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhCccccCch----------------HHHHHHHHHHHHhcCHHHHHHHHHHHHhcc
Confidence 3445667777899999999999999998776421 258899999999999999999999999999
Q ss_pred CCCHHHHHHHHHH-HHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCc
Q 017811 264 ENNVKALFRRGKA-RAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEIYKGIFGPRPEP 335 (365)
Q Consensus 264 p~n~ka~~~~g~a-~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~~~~~~~~~k~~y~kmf~~~~~~ 335 (365)
|.+...+...+.. +..+|++++|...|+++++++|++..+...+..+....++. .+.+..|.+.+...+..
T Consensus 387 ~~~~~~~~~~a~~~~~~~~~~~~A~~~~e~al~~~p~~~~~~~~~~~~~~~~g~~-~~Ar~~~~~al~~~~~~ 458 (530)
T 2ooe_A 387 RTRHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNED-NNTRVLFERVLTSGSLP 458 (530)
T ss_dssp TCCTHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTTTCH-HHHHHHHHHHHHSCCSC
T ss_pred CCchHHHHHHHHHHHHHcCChhHHHHHHHHHHHHCCCCHHHHHHHHHHHHhCCCH-hhHHHHHHHHHhccCCC
Confidence 9888888877765 44699999999999999999999999998888876555443 46778899988765543
No 226
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.62 E-value=9.9e-08 Score=73.31 Aligned_cols=83 Identities=12% Similarity=0.011 Sum_probs=69.7
Q ss_pred HHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHh
Q 017811 182 ADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLG 261 (365)
Q Consensus 182 a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~ 261 (365)
+..+...|..++..++|..|+.-|+.|+...+.....+ .....++.++|.||.++|+++.|+..+++++.
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~----------~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~ 74 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEIST----------IDKVSVLDYLSYAVYQQGDLDKALLLTKKLLE 74 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCS----------SCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCc----------ccHHHHHHHHHHHHHHccCHHHHHHHHHHHHh
Confidence 45678999999999999999999999999875431100 01235689999999999999999999999999
Q ss_pred CCCCCHHHHHHHH
Q 017811 262 EDENNVKALFRRG 274 (365)
Q Consensus 262 ~~p~n~ka~~~~g 274 (365)
++|++..++.+++
T Consensus 75 l~P~~~~~~~n~~ 87 (104)
T 2v5f_A 75 LDPEHQRANGNLK 87 (104)
T ss_dssp HCTTCHHHHHHHH
T ss_pred cCCCCHHHHhhHH
Confidence 9999999988886
No 227
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.62 E-value=1.6e-07 Score=79.62 Aligned_cols=109 Identities=10% Similarity=-0.013 Sum_probs=88.4
Q ss_pred HHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHH
Q 017811 180 GAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLV 259 (365)
Q Consensus 180 ~~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~a 259 (365)
..+..+...|..+...|+|++|+..|.+++.+....... ......+++++|.++..+|++++|+.++.++
T Consensus 64 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~----------~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~a 133 (203)
T 3gw4_A 64 AEHRALHQVGMVERMAGNWDAARRCFLEERELLASLPED----------PLAASANAYEVATVALHFGDLAGARQEYEKS 133 (203)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCC----------HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCcc----------HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 456678889999999999999999999999985422100 0012456999999999999999999999999
Q ss_pred HhCCC--CC----HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC
Q 017811 260 LGEDE--NN----VKALFRRGKARAELGQTDAAREDFLKAGKFAP 298 (365)
Q Consensus 260 L~~~p--~n----~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P 298 (365)
+.+.+ .+ ..++..+|.++..+|++++|+..|++++.+..
T Consensus 134 l~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 178 (203)
T 3gw4_A 134 LVYAQQADDQVAIACAFRGLGDLAQQEKNLLEAQQHWLRARDIFA 178 (203)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhccchHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHH
Confidence 96532 22 34678999999999999999999999998754
No 228
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.61 E-value=4.3e-07 Score=85.08 Aligned_cols=127 Identities=7% Similarity=-0.097 Sum_probs=81.7
Q ss_pred HHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHH
Q 017811 181 AADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVL 260 (365)
Q Consensus 181 ~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL 260 (365)
.+..+...|..++..|+|.+|+..|.+++.+.+..... .....+++++|.++...|+|++|+..+.+++
T Consensus 52 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~-----------~~~~~~~~~la~~~~~~G~~~~A~~~~~~al 120 (373)
T 1hz4_A 52 RIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVW-----------HYALWSLIQQSEILFAQGFLQTAWETQEKAF 120 (373)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCH-----------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcH-----------HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 34456677888888888888888888888876542110 0112346677777777777777777777777
Q ss_pred hCC--------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCc-----HHHHHHHHHHHHHHHHHH
Q 017811 261 GED--------ENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPED-----KSIARELRLLAEHEKAVY 318 (365)
Q Consensus 261 ~~~--------p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n-----~~~~~~l~~l~~~~~~~~ 318 (365)
.+. |....++..+|.++..+|++++|...+.+++.+.|.. ..+...+..+....++..
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~ 191 (373)
T 1hz4_A 121 QLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQLQCLAMLIQCSLARGDLD 191 (373)
T ss_dssp HHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGGGGHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHhccccCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHcCCHH
Confidence 653 3345566677777777777777777777777776642 233444455544444443
No 229
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=98.59 E-value=8.4e-07 Score=70.08 Aligned_cols=105 Identities=13% Similarity=0.132 Sum_probs=86.4
Q ss_pred hhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHH---HHHHHHHHHhCC-C-CCH
Q 017811 193 FKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEE---AIGQCSLVLGED-E-NNV 267 (365)
Q Consensus 193 ~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~---A~~~~~~aL~~~-p-~n~ 267 (365)
........+.+.|.+++...+.. ..+.+|+|.|+.+..+... +|..+...+..+ | .+.
T Consensus 12 ~~~~~l~~~~~~y~~e~~~~~~s-----------------~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~R 74 (126)
T 1nzn_A 12 VSVEDLLKFEKKFQSEKAAGSVS-----------------KSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQR 74 (126)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCCC-----------------HHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHH
T ss_pred CCHHHHHHHHHHHHHHhccCCCc-----------------HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHH
Confidence 34455667777888877654432 2348999999999987777 999999999887 5 578
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHH
Q 017811 268 KALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHE 314 (365)
Q Consensus 268 ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~~ 314 (365)
.++|.+|.+++.+|+|++|+..+..+|+++|+|..+......+..+.
T Consensus 75 d~lY~LAvg~yklg~Y~~A~~~~~~lL~~eP~n~QA~~Lk~~i~~~i 121 (126)
T 1nzn_A 75 DYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERLIDKAM 121 (126)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999998877776544
No 230
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=98.56 E-value=1.4e-07 Score=72.99 Aligned_cols=83 Identities=18% Similarity=0.132 Sum_probs=73.4
Q ss_pred HHHHHHHHHHhCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Q 017811 251 EAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEIYKGIFG 330 (365)
Q Consensus 251 ~A~~~~~~aL~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~~~~~~~~~k~~y~kmf~ 330 (365)
.|+..+.++++.+|+++.+++.+|.++..+|++++|+..|++++.++|++..+...++.+....++..+.. ..|.+.+.
T Consensus 3 ~a~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~-~~~~~al~ 81 (115)
T 2kat_A 3 AITERLEAMLAQGTDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGAR-QAWESGLA 81 (115)
T ss_dssp CHHHHHHHHHTTTCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHH-HHHHHHHH
T ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHH-HHHHHHHH
Confidence 57889999999999999999999999999999999999999999999999999999999988877766554 44787776
Q ss_pred CCCC
Q 017811 331 PRPE 334 (365)
Q Consensus 331 ~~~~ 334 (365)
..+.
T Consensus 82 ~~~~ 85 (115)
T 2kat_A 82 AAQS 85 (115)
T ss_dssp HHHH
T ss_pred hccc
Confidence 5553
No 231
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.53 E-value=1.4e-06 Score=85.99 Aligned_cols=118 Identities=13% Similarity=0.084 Sum_probs=100.9
Q ss_pred HHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHH-------hcCHH-------HHHHHHHHHHh-CC
Q 017811 199 EEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLK-------LKRYE-------EAIGQCSLVLG-ED 263 (365)
Q Consensus 199 ~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~k-------l~~~~-------~A~~~~~~aL~-~~ 263 (365)
.+|+..|++|+...|.+.. +++++|..+.+ +|+++ +|+..++++++ +.
T Consensus 255 ~~a~~~y~~al~~~p~~~~-----------------~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~~ 317 (530)
T 2ooe_A 255 KRVMFAYEQCLLVLGHHPD-----------------IWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLL 317 (530)
T ss_dssp HHHHHHHHHHHHHHTTCHH-----------------HHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHHhCCCCHH-----------------HHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHhC
Confidence 4788999999999998644 48999999886 78977 99999999997 89
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcH-HHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCC
Q 017811 264 ENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDK-SIARELRLLAEHEKAVYKKQKEIYKGIFGPRPE 334 (365)
Q Consensus 264 p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~-~~~~~l~~l~~~~~~~~~~~k~~y~kmf~~~~~ 334 (365)
|++..+++.+|.++..+|++++|...|++++.+.|.+. .+...+..+..+.+.. +..+..|.+.+...+.
T Consensus 318 p~~~~l~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~-~~A~~~~~~Al~~~~~ 388 (530)
T 2ooe_A 318 KKNMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGI-KSGRMIFKKAREDART 388 (530)
T ss_dssp SSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHTCTTC
T ss_pred cccHHHHHHHHHHHHhcCCHHHHHHHHHHHhCccccCchHHHHHHHHHHHHhcCH-HHHHHHHHHHHhccCC
Confidence 99999999999999999999999999999999999985 5777777776666554 4567789999887664
No 232
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.53 E-value=1e-06 Score=71.18 Aligned_cols=97 Identities=13% Similarity=0.020 Sum_probs=77.0
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHH----hcCHHHHHHHHHHHHhCC
Q 017811 188 DGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLK----LKRYEEAIGQCSLVLGED 263 (365)
Q Consensus 188 ~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~k----l~~~~~A~~~~~~aL~~~ 263 (365)
.|..+...+.+.+|+..|++|.+.. + ..+++|||.+|.. .+++.+|+.+++++.+.
T Consensus 31 lg~~y~~g~~~~~A~~~~~~Aa~~g--~-----------------~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~- 90 (138)
T 1klx_A 31 LSLVSNSQINKQKLFQYLSKACELN--S-----------------GNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL- 90 (138)
T ss_dssp HHHHTCTTSCHHHHHHHHHHHHHTT--C-----------------HHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT-
T ss_pred HHHHHHcCCCHHHHHHHHHHHHcCC--C-----------------HHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC-
Confidence 6666777777788888888888762 2 2348899999988 88999999999999876
Q ss_pred CCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhCCCcHHHHHHH
Q 017811 264 ENNVKALFRRGKARAE----LGQTDAAREDFLKAGKFAPEDKSIAREL 307 (365)
Q Consensus 264 p~n~ka~~~~g~a~~~----l~~~~~A~~~l~~al~l~P~n~~~~~~l 307 (365)
.++.+++++|.+|.. .+++++|+.+|++|.++ .++.+...|
T Consensus 91 -g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~--g~~~A~~~l 135 (138)
T 1klx_A 91 -NDQDGCLILGYKQYAGKGVVKNEKQAVKTFEKACRL--GSEDACGIL 135 (138)
T ss_dssp -TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHC
T ss_pred -CCHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHHC--CCHHHHHHH
Confidence 688999999999998 88999999999999887 345554444
No 233
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.40 E-value=2.9e-06 Score=82.96 Aligned_cols=77 Identities=14% Similarity=-0.008 Sum_probs=65.5
Q ss_pred hhhhHHHHHHHH----hcCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhCCC---cHH
Q 017811 234 PCHLNMAACLLK----LKRYEEAIGQCSLVLGEDENNVKALFRRGKARAE----LGQTDAAREDFLKAGKFAPE---DKS 302 (365)
Q Consensus 234 ~~~~nla~~~~k----l~~~~~A~~~~~~aL~~~p~n~ka~~~~g~a~~~----l~~~~~A~~~l~~al~l~P~---n~~ 302 (365)
.+++++|.+|.. .+++++|+.+++++++.. ++.+++++|.+|.. .+++++|..+|++|++.+|+ +..
T Consensus 364 ~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~~--~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~~ 441 (490)
T 2xm6_A 364 AAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQG--LSAAQVQLGEIYYYGLGVERDYVQAWAWFDTASTNDMNLFGTEN 441 (490)
T ss_dssp HHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHHHCCHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhCC--CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCCCCcCCHH
Confidence 468899999998 889999999999998864 78999999999998 89999999999999999854 777
Q ss_pred HHHHHHHHHH
Q 017811 303 IARELRLLAE 312 (365)
Q Consensus 303 ~~~~l~~l~~ 312 (365)
+...+..+..
T Consensus 442 a~~~l~~~~~ 451 (490)
T 2xm6_A 442 RNITEKKLTA 451 (490)
T ss_dssp HHHHHTTSCH
T ss_pred HHHHHHhcCH
Confidence 7777776644
No 234
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.39 E-value=1.6e-06 Score=81.21 Aligned_cols=141 Identities=9% Similarity=0.014 Sum_probs=107.7
Q ss_pred HHHHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHH
Q 017811 178 RIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCS 257 (365)
Q Consensus 178 ~~~~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~ 257 (365)
....+..+...|..++..|++.+|+..+.+++...|.+... ....+++++|.++...|++++|+..+.
T Consensus 10 ~~~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~~~~~~~------------~~~~~~~~l~~~~~~~g~~~~A~~~~~ 77 (373)
T 1hz4_A 10 DTMHAEFNALRAQVAINDGNPDEAERLAKLALEELPPGWFY------------SRIVATSVLGEVLHCKGELTRSLALMQ 77 (373)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTCHH------------HHHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCCCCchh------------HHHHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 33456667788999999999999999999999988653211 124468999999999999999999999
Q ss_pred HHHhCCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC--------CcHHHHHHHHHHHHHHHHHHHHHHH
Q 017811 258 LVLGEDENN------VKALFRRGKARAELGQTDAAREDFLKAGKFAP--------EDKSIARELRLLAEHEKAVYKKQKE 323 (365)
Q Consensus 258 ~aL~~~p~n------~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P--------~n~~~~~~l~~l~~~~~~~~~~~k~ 323 (365)
+++.+.|.. ..+++.+|.++...|++++|+..|++++.+.+ ....+...+..+....++..+.. .
T Consensus 78 ~al~~~~~~~~~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~-~ 156 (373)
T 1hz4_A 78 QTEQMARQHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAE-A 156 (373)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHH-H
T ss_pred HHHHHHHhcCcHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhcCHHHHH-H
Confidence 999876533 34588999999999999999999999999863 33445556777766666655444 3
Q ss_pred HHhcccCC
Q 017811 324 IYKGIFGP 331 (365)
Q Consensus 324 ~y~kmf~~ 331 (365)
.+.+.+..
T Consensus 157 ~~~~al~~ 164 (373)
T 1hz4_A 157 SARSGIEV 164 (373)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 35555433
No 235
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=98.36 E-value=4.2e-06 Score=89.91 Aligned_cols=140 Identities=12% Similarity=0.101 Sum_probs=107.2
Q ss_pred HhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHhCC
Q 017811 184 RRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGED 263 (365)
Q Consensus 184 ~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~~~ 263 (365)
.+...|..++..|+|.+|+.+|.+|- + |..+|.||.++|+|++|++.+++|...+
T Consensus 1197 d~~~iGd~le~eg~YeeA~~~Y~kA~-----n--------------------y~rLA~tLvkLge~q~AIEaarKA~n~~ 1251 (1630)
T 1xi4_A 1197 HIQQVGDRCYDEKMYDAAKLLYNNVS-----N--------------------FGRLASTLVHLGEYQAAVDGARKANSTR 1251 (1630)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHhhh-----H--------------------HHHHHHHHHHhCCHHHHHHHHHHhCCHH
Confidence 45679999999999999999999972 1 8899999999999999999999986554
Q ss_pred C-------------------------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHH--HH
Q 017811 264 E-------------------------NNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHE--KA 316 (365)
Q Consensus 264 p-------------------------~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~~--~~ 316 (365)
+ .++..+..++..|...|.|++|+..|+++|.++|.+..+..+|..+..+. .+
T Consensus 1252 aWkev~~acve~~Ef~LA~~cgl~Iiv~~deLeeli~yYe~~G~feEAI~LlE~aL~LeraH~gmftELaiLyaKy~pek 1331 (1630)
T 1xi4_A 1252 TWKEVCFACVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYSKFKPQK 1331 (1630)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHHHhccChhHhHHHHHHHHHHHhCCHHH
Confidence 4 24556778888899999999999999999999999999998888876643 33
Q ss_pred HHHHHHHHHhcccCCCC---CccccchhHHHHHHHH
Q 017811 317 VYKKQKEIYKGIFGPRP---EPKQKKNWLIIFWQLL 349 (365)
Q Consensus 317 ~~~~~k~~y~kmf~~~~---~~~~~~~~~~~~~~~~ 349 (365)
..+..+- |..-.+-++ .+.+...|..+++.|+
T Consensus 1332 lmEhlk~-f~~rini~k~~r~~e~~~lW~elv~LY~ 1366 (1630)
T 1xi4_A 1332 MREHLEL-FWSRVNIPKVLRAAEQAHLWAELVFLYD 1366 (1630)
T ss_pred HHHHHHH-HHHhcccchHhHHHHHHHHHHHHHHHHH
Confidence 3334444 332222222 3445577777777665
No 236
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=98.34 E-value=2.3e-06 Score=82.24 Aligned_cols=138 Identities=13% Similarity=0.114 Sum_probs=79.1
Q ss_pred HhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHhCC
Q 017811 184 RRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGED 263 (365)
Q Consensus 184 ~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~~~ 263 (365)
.+...|+.++..|+|++|+..|.++ .+ |.++|.|+.++|+|++|+..+.++. +
T Consensus 124 a~~~IGd~~~~~g~yeeA~~~Y~~a-----~n--------------------~~~LA~~L~~Lg~yq~AVea~~KA~--~ 176 (449)
T 1b89_A 124 HIQQVGDRCYDEKMYDAAKLLYNNV-----SN--------------------FGRLASTLVHLGEYQAAVDGARKAN--S 176 (449)
T ss_dssp -------------CTTTHHHHHHHT-----TC--------------------HHHHHHHHHTTTCHHHHHHHHHHHT--C
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHh-----hh--------------------HHHHHHHHHHhccHHHHHHHHHHcC--C
Confidence 5566666666666777666666655 11 5566666666666666666666662 2
Q ss_pred C---------------------------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHH-
Q 017811 264 E---------------------------NNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEK- 315 (365)
Q Consensus 264 p---------------------------~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~~~- 315 (365)
| .++.-+..+...|...|+|++|+..|++++.+++.+..+..+|..+..+.+
T Consensus 177 ~~~Wk~v~~aCv~~~ef~lA~~~~l~L~~~ad~l~~lv~~Yek~G~~eEai~lLe~aL~le~ah~~~ftel~il~~ky~p 256 (449)
T 1b89_A 177 TRTWKEVCFACVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYSKFKP 256 (449)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHTTTTTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSTTCCHHHHHHHHHHHHTTCH
T ss_pred chhHHHHHHHHHHcCcHHHHHHHHHHHHhCHhhHHHHHHHHHHCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHhcCH
Confidence 2 222334445578999999999999999999999999999999988866432
Q ss_pred -HHHHHHHHHHhcccCCCC---CccccchhHHHHHHHH
Q 017811 316 -AVYKKQKEIYKGIFGPRP---EPKQKKNWLIIFWQLL 349 (365)
Q Consensus 316 -~~~~~~k~~y~kmf~~~~---~~~~~~~~~~~~~~~~ 349 (365)
+..+..+. |.+-.+-++ .+.+...|..+++.|+
T Consensus 257 ~k~~ehl~~-~~~~ini~k~~~~~~~~~~w~e~~~ly~ 293 (449)
T 1b89_A 257 QKMREHLEL-FWSRVNIPKVLRAAEQAHLWAELVFLYD 293 (449)
T ss_dssp HHHHHHHHH-HSTTSCHHHHHHHHHTTTCHHHHHHHHH
T ss_pred HHHHHHHHH-HHHHhcCcHHHHHHHHHHHHHHHHHHHH
Confidence 22223332 222222211 1233578887777664
No 237
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.33 E-value=9.8e-07 Score=86.70 Aligned_cols=114 Identities=11% Similarity=-0.049 Sum_probs=88.9
Q ss_pred HHHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHH
Q 017811 179 IGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSL 258 (365)
Q Consensus 179 ~~~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~ 258 (365)
...+..+.+.|..|..+|+|++|+.+|+++|.+......- . .......++|||.+|..+|+|++|+..+.+
T Consensus 348 p~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~----~-----Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~ 418 (490)
T 3n71_A 348 LYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHH----N-----NAQLGMAVMRAGLTNWHAGHIEVGHGMICK 418 (490)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCT----T-----CHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCC----C-----CHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 4556677789999999999999999999999886321100 0 001245699999999999999999999999
Q ss_pred HHhC-----CCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcH
Q 017811 259 VLGE-----DENN---VKALFRRGKARAELGQTDAAREDFLKAGKFAPEDK 301 (365)
Q Consensus 259 aL~~-----~p~n---~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~ 301 (365)
||++ -|++ .+.+-.++.++..++.|.+|...|+++.+-.-+|.
T Consensus 419 Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~~~~~~~ 469 (490)
T 3n71_A 419 AYAILLVTHGPSHPITKDLEAMRMQTEMELRMFRQNEFMYHKMREAALNNQ 469 (490)
T ss_dssp HHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 9964 4555 45677899999999999999999999876443333
No 238
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.29 E-value=7.7e-06 Score=79.40 Aligned_cols=107 Identities=11% Similarity=-0.037 Sum_probs=66.1
Q ss_pred Hhhhhhhhhhhhh---hHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHh----cCHHHHHHHH
Q 017811 184 RRKMDGNALFKEE---KLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKL----KRYEEAIGQC 256 (365)
Q Consensus 184 ~~k~~G~~~~~~~---~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl----~~~~~A~~~~ 256 (365)
.+...|..+...| ++.+|+..|++++...+.... .++++|.+|... +++++|+.+|
T Consensus 178 a~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g~~~a~-----------------~~~~Lg~~y~~g~~~~~d~~~A~~~~ 240 (452)
T 3e4b_A 178 CYVELATVYQKKQQPEQQAELLKQMEAGVSRGTVTAQ-----------------RVDSVARVLGDATLGTPDEKTAQALL 240 (452)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCSCHH-----------------HHHHHHHHHTCGGGSSCCHHHHHHHH
T ss_pred HHHHHHHHHHHcCCcccHHHHHHHHHHHHHCCCHHHH-----------------HHHHHHHHHhCCCCCCCCHHHHHHHH
Confidence 4556788888888 999999999999998876533 135555555443 4555555555
Q ss_pred HHHHhCCCCCHHHHHHHHHH-H--HHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHH
Q 017811 257 SLVLGEDENNVKALFRRGKA-R--AELGQTDAAREDFLKAGKFAPEDKSIARELRLLAE 312 (365)
Q Consensus 257 ~~aL~~~p~n~ka~~~~g~a-~--~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~ 312 (365)
+++. |+++.+++++|.+ + ...+++++|+.+|+++.+. ++..+...|+.+..
T Consensus 241 ~~aa---~g~~~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~--g~~~A~~~Lg~~y~ 294 (452)
T 3e4b_A 241 EKIA---PGYPASWVSLAQLLYDFPELGDVEQMMKYLDNGRAA--DQPRAELLLGKLYY 294 (452)
T ss_dssp HHHG---GGSTHHHHHHHHHHHHSGGGCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHH
T ss_pred HHHc---CCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHH
Confidence 5555 5555555555555 2 3455555555555555533 34555555555443
No 239
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.28 E-value=7.5e-06 Score=65.96 Aligned_cols=94 Identities=14% Similarity=-0.035 Sum_probs=82.8
Q ss_pred hhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHhCCCCCHHHHHHHH
Q 017811 195 EEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRG 274 (365)
Q Consensus 195 ~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~~~p~n~ka~~~~g 274 (365)
.+++.+|+..|++|.+..... +. +|.+|...+.+++|+.+++++.+. .++.+++++|
T Consensus 8 ~~d~~~A~~~~~~aa~~g~~~-------------------a~--lg~~y~~g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg 64 (138)
T 1klx_A 8 KKDLKKAIQYYVKACELNEMF-------------------GC--LSLVSNSQINKQKLFQYLSKACEL--NSGNGCRFLG 64 (138)
T ss_dssp HHHHHHHHHHHHHHHHTTCTT-------------------HH--HHHHTCTTSCHHHHHHHHHHHHHT--TCHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHcCCCHh-------------------hh--HHHHHHcCCCHHHHHHHHHHHHcC--CCHHHHHHHH
Confidence 478999999999999875331 23 999999999999999999999987 6999999999
Q ss_pred HHHHH----cCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHH
Q 017811 275 KARAE----LGQTDAAREDFLKAGKFAPEDKSIARELRLLAEH 313 (365)
Q Consensus 275 ~a~~~----l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~ 313 (365)
.+|.. .+++++|+.+|+++.+. .++.+...|..+...
T Consensus 65 ~~y~~G~g~~~d~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~ 105 (138)
T 1klx_A 65 DFYENGKYVKKDLRKAAQYYSKACGL--NDQDGCLILGYKQYA 105 (138)
T ss_dssp HHHHHCSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHH
T ss_pred HHHHcCCCCCccHHHHHHHHHHHHcC--CCHHHHHHHHHHHHC
Confidence 99999 89999999999999987 678888889888765
No 240
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=98.26 E-value=2.2e-06 Score=81.63 Aligned_cols=143 Identities=8% Similarity=-0.084 Sum_probs=88.8
Q ss_pred hhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHhCCC
Q 017811 185 RKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGEDE 264 (365)
Q Consensus 185 ~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~~~p 264 (365)
..++|..+++.|+|.+|+..|.++++..+.....................++.++|.+|.+.|+|++|+.++.+++.+.+
T Consensus 7 ~l~~a~~l~~~~~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~~ 86 (434)
T 4b4t_Q 7 KLEEARRLVNEKQYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKLREFIPHSTEYMM 86 (434)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 45677888999999999999999999887643211100000000111233567777777777777777777766554321
Q ss_pred ----------------------------------------------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC
Q 017811 265 ----------------------------------------------NNVKALFRRGKARAELGQTDAAREDFLKAGKFAP 298 (365)
Q Consensus 265 ----------------------------------------------~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P 298 (365)
...+++.++|.+|..+|+|++|+..++.++....
T Consensus 87 ~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~ 166 (434)
T 4b4t_Q 87 QFAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHYQKKQYKDSLALINDLLREFK 166 (434)
T ss_dssp TSCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHT
T ss_pred HccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHH
Confidence 1244677888899999999999988888876522
Q ss_pred ------CcHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 017811 299 ------EDKSIARELRLLAEHEKAVYKKQKEIYKGI 328 (365)
Q Consensus 299 ------~n~~~~~~l~~l~~~~~~~~~~~k~~y~km 328 (365)
....+...+..+...++++.+ .+..|.+.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-A~~~~~~a 201 (434)
T 4b4t_Q 167 KLDDKPSLVDVHLLESKVYHKLRNLAK-SKASLTAA 201 (434)
T ss_dssp TSSCSTHHHHHHHHHHHHHHHTTCHHH-HHHHHHHH
T ss_pred hcccchhHHHHHHHHHHHHHHhCcHHH-HHHHHHHH
Confidence 224455555555555554443 23334443
No 241
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.25 E-value=1.4e-05 Score=78.01 Aligned_cols=108 Identities=15% Similarity=0.036 Sum_probs=68.6
Q ss_pred HHHhhhhhhhhhh----hhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHH----hcCHHHHH
Q 017811 182 ADRRKMDGNALFK----EEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLK----LKRYEEAI 253 (365)
Q Consensus 182 a~~~k~~G~~~~~----~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~k----l~~~~~A~ 253 (365)
+..+...|..++. .+++.+|+..|++|++.. + ..++++||.+|.. .+++++|+
T Consensus 39 ~~a~~~lg~~y~~g~~~~~~~~~A~~~~~~a~~~~--~-----------------~~a~~~Lg~~y~~g~g~~~~~~~A~ 99 (490)
T 2xm6_A 39 AKAQLELGYRYFQGNETTKDLTQAMDWFRRAAEQG--Y-----------------TPAEYVLGLRYMNGEGVPQDYAQAV 99 (490)
T ss_dssp HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--C-----------------HHHHHHHHHHHHHTSSSCCCHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHHCC--C-----------------HHHHHHHHHHHHcCCCCCCCHHHHH
Confidence 4456677888877 788999999999988752 1 1135566666666 66666666
Q ss_pred HHHHHHHhCCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHH
Q 017811 254 GQCSLVLGEDENNVKALFRRGKARAE----LGQTDAAREDFLKAGKFAPEDKSIARELRLLAE 312 (365)
Q Consensus 254 ~~~~~aL~~~p~n~ka~~~~g~a~~~----l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~ 312 (365)
.++.++++. .++.+++++|.+|.. .+++++|+.+|+++... ++..+...|..+..
T Consensus 100 ~~~~~a~~~--~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~ 158 (490)
T 2xm6_A 100 IWYKKAALK--GLPQAQQNLGVMYHEGNGVKVDKAESVKWFRLAAEQ--GRDSGQQSMGDAYF 158 (490)
T ss_dssp HHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHH
T ss_pred HHHHHHHHC--CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHH
Confidence 666666553 356666666666666 56666666666666543 34555555555543
No 242
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=98.20 E-value=5.3e-06 Score=74.93 Aligned_cols=92 Identities=12% Similarity=-0.000 Sum_probs=80.5
Q ss_pred hhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHh-----cCHHHHHHHHHHHHhCCCCC-H
Q 017811 194 KEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKL-----KRYEEAIGQCSLVLGEDENN-V 267 (365)
Q Consensus 194 ~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl-----~~~~~A~~~~~~aL~~~p~n-~ 267 (365)
..+....|....++||+++|... ...+|.-+|..|.+. |+.++|..+++++|+++|+. .
T Consensus 175 Al~~l~~A~a~lerAleLDP~~~---------------~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~i 239 (301)
T 3u64_A 175 LPDTVHAAVMMLERACDLWPSYQ---------------EGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDP 239 (301)
T ss_dssp CHHHHHHHHHHHHHHHHHCTTHH---------------HHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCS
T ss_pred HHHhHHHHHHHHHHHHHhCCCcc---------------cCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCc
Confidence 44566789999999999998731 244699999999996 99999999999999999975 9
Q ss_pred HHHHHHHHHHHH-cCCHHHHHHHHHHHHhhCCCc
Q 017811 268 KALFRRGKARAE-LGQTDAAREDFLKAGKFAPED 300 (365)
Q Consensus 268 ka~~~~g~a~~~-l~~~~~A~~~l~~al~l~P~n 300 (365)
.+++..|..+.. .+++++|...|++|+..+|..
T Consensus 240 d~~v~YA~~l~~~~gd~~~a~~~L~kAL~a~p~~ 273 (301)
T 3u64_A 240 DHHITYADALCIPLNNRAGFDEALDRALAIDPES 273 (301)
T ss_dssp HHHHHHHHHTTTTTTCHHHHHHHHHHHHHCCGGG
T ss_pred hHHHHHHHHHHHhcCCHHHHHHHHHHHHcCCCCC
Confidence 999999999988 499999999999999988863
No 243
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=98.13 E-value=1.5e-05 Score=75.79 Aligned_cols=119 Identities=13% Similarity=0.082 Sum_probs=90.4
Q ss_pred HHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhh--------------hhhhHHH------HH----H-----H
Q 017811 180 GAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQ--------------LFGKYRD------MA----L-----A 230 (365)
Q Consensus 180 ~~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~--------------~~~~~~~------~~----~-----~ 230 (365)
.....+...|..|+..|+|++|+..|.+++.+.+...... ..+.... .. . .
T Consensus 53 ~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 132 (434)
T 4b4t_Q 53 EQETSILELGQLYVTMGAKDKLREFIPHSTEYMMQFAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVF 132 (434)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHHTSCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCS
T ss_pred hHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccH
Confidence 4455678899999999999999999999998775421110 0000000 00 0 1
Q ss_pred hhchhhhHHHHHHHHhcCHHHHHHHHHHHHhC------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC
Q 017811 231 VKNPCHLNMAACLLKLKRYEEAIGQCSLVLGE------DENNVKALFRRGKARAELGQTDAAREDFLKAGKFAP 298 (365)
Q Consensus 231 ~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~~------~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P 298 (365)
+...++.++|.+|...|+|.+|+..+.+++.. .+..+.++...|.+|..+|+|++|...|++++.+.+
T Consensus 133 ~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~ 206 (434)
T 4b4t_Q 133 LKHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAAN 206 (434)
T ss_dssp SHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhh
Confidence 22457899999999999999999999998854 344567999999999999999999999999998754
No 244
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.09 E-value=1.1e-05 Score=65.86 Aligned_cols=78 Identities=14% Similarity=0.121 Sum_probs=63.8
Q ss_pred HHhhhhhhhhhhhh---hHHHHHHHHHHHHHhh-ccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHH
Q 017811 183 DRRKMDGNALFKEE---KLEEAMQQYEMAIAYM-GDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSL 258 (365)
Q Consensus 183 ~~~k~~G~~~~~~~---~y~~A~~~y~~al~~~-~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~ 258 (365)
....+.|..+.+.+ ++.+++..++..++.. |.+ ...++++||..|+++++|.+|+.+|++
T Consensus 33 ~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~----------------~rd~lY~LAv~~~kl~~Y~~A~~y~~~ 96 (152)
T 1pc2_A 33 STQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEE----------------QRDYVFYLAVGNYRLKEYEKALKYVRG 96 (152)
T ss_dssp HHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHH----------------HHHHHHHHHHHHHHTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccc----------------hHHHHHHHHHHHHHccCHHHHHHHHHH
Confidence 44556777788766 7889999999999976 421 234799999999999999999999999
Q ss_pred HHhCCCCCHHHHHHHHHH
Q 017811 259 VLGEDENNVKALFRRGKA 276 (365)
Q Consensus 259 aL~~~p~n~ka~~~~g~a 276 (365)
+|+++|+|..|..-+-.+
T Consensus 97 lL~ieP~n~QA~~Lk~~i 114 (152)
T 1pc2_A 97 LLQTEPQNNQAKELERLI 114 (152)
T ss_dssp HHHHCTTCHHHHHHHHHH
T ss_pred HHhcCCCCHHHHHHHHHH
Confidence 999999999887665444
No 245
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=98.09 E-value=5.1e-05 Score=71.12 Aligned_cols=117 Identities=11% Similarity=-0.013 Sum_probs=83.1
Q ss_pred Hhhhhhhhhhh---hhhHHHHHHHHHHHHHhhccchhhhh---------------hhhHHHH----HH--------Hhhc
Q 017811 184 RRKMDGNALFK---EEKLEEAMQQYEMAIAYMGDDFMFQL---------------FGKYRDM----AL--------AVKN 233 (365)
Q Consensus 184 ~~k~~G~~~~~---~~~y~~A~~~y~~al~~~~~~~~~~~---------------~~~~~~~----~~--------~~~~ 233 (365)
.+.-+|..++. ...+.+|+.+|++|+++.|+....-- ....... .. ....
T Consensus 198 dl~Lra~~~l~~~~~~~~~~A~~l~e~Al~lDP~~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~a~~a~~~~~~~a 277 (372)
T 3ly7_A 198 TNFYQAHDYLLHGDDKSLNRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIVTLPELNNLS 277 (372)
T ss_dssp HHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTCGGGTTCH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccCCCchhhHHHHHHHHHHHHhcccCCcCH
Confidence 34456666655 45578999999999999997432100 0000000 00 0111
Q ss_pred hhhhHHHHHHHHhcCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcH
Q 017811 234 PCHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDK 301 (365)
Q Consensus 234 ~~~~nla~~~~kl~~~~~A~~~~~~aL~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~ 301 (365)
.+|.-+|.+++..|++++|+..+++++.++| ++-+|..+|.++...|++++|+..|.+|+.++|..+
T Consensus 278 ~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~-s~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~ 344 (372)
T 3ly7_A 278 IIYQIKAVSALVKGKTDESYQAINTGIDLEM-SWLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGAN 344 (372)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHhcCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcC
Confidence 2445567777778999999999999999986 577888999999999999999999999999999864
No 246
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=98.08 E-value=2e-05 Score=62.41 Aligned_cols=83 Identities=13% Similarity=0.108 Sum_probs=72.1
Q ss_pred hhhhHHHHHHHHhcCH---HHHHHHHHHHHhCCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHH
Q 017811 234 PCHLNMAACLLKLKRY---EEAIGQCSLVLGEDEN-NVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRL 309 (365)
Q Consensus 234 ~~~~nla~~~~kl~~~---~~A~~~~~~aL~~~p~-n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~ 309 (365)
.+.+|+|.|+.+..+. .++|..+...+..+|. ....+|.+|.+++.+|+|++|+.+...+|+++|+|..+......
T Consensus 41 qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~Lk~~ 120 (134)
T 3o48_A 41 QSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSM 120 (134)
T ss_dssp HHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHHHHHH
T ss_pred hhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHHHHHH
Confidence 3588999999998754 5789999999988884 57899999999999999999999999999999999999988877
Q ss_pred HHHHHHH
Q 017811 310 LAEHEKA 316 (365)
Q Consensus 310 l~~~~~~ 316 (365)
+..+..+
T Consensus 121 Ie~ki~k 127 (134)
T 3o48_A 121 VEDKIQK 127 (134)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 7665543
No 247
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.07 E-value=2.3e-05 Score=76.01 Aligned_cols=101 Identities=16% Similarity=0.031 Sum_probs=67.8
Q ss_pred hhhhhhhhhh----hhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHH-H--HHhcCHHHHHHHHHH
Q 017811 186 KMDGNALFKE----EKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAAC-L--LKLKRYEEAIGQCSL 258 (365)
Q Consensus 186 k~~G~~~~~~----~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~-~--~kl~~~~~A~~~~~~ 258 (365)
...|..+... +++.+|+..|++++ +.+.. ++++||.+ | ...+++++|+.++++
T Consensus 217 ~~Lg~~y~~g~~~~~d~~~A~~~~~~aa---~g~~~-----------------a~~~Lg~~~~~~~~~~d~~~A~~~~~~ 276 (452)
T 3e4b_A 217 DSVARVLGDATLGTPDEKTAQALLEKIA---PGYPA-----------------SWVSLAQLLYDFPELGDVEQMMKYLDN 276 (452)
T ss_dssp HHHHHHHTCGGGSSCCHHHHHHHHHHHG---GGSTH-----------------HHHHHHHHHHHSGGGCCHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCCCHHHHHHHHHHHc---CCCHH-----------------HHHHHHHHHHhCCCCCCHHHHHHHHHH
Confidence 4455665544 68999999999988 44322 36677776 3 356677777777777
Q ss_pred HHhCCCCCHHHHHHHHHHHHHcC-----CHHHHHHHHHHHHhhCCCcHHHHHHHHHHHH
Q 017811 259 VLGEDENNVKALFRRGKARAELG-----QTDAAREDFLKAGKFAPEDKSIARELRLLAE 312 (365)
Q Consensus 259 aL~~~p~n~ka~~~~g~a~~~l~-----~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~ 312 (365)
+++. .++.+++++|.+|. .| ++++|+.+|+++. |++..+...|+.+..
T Consensus 277 Aa~~--g~~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa---~g~~~A~~~Lg~~y~ 329 (452)
T 3e4b_A 277 GRAA--DQPRAELLLGKLYY-EGKWVPADAKAAEAHFEKAV---GREVAADYYLGQIYR 329 (452)
T ss_dssp HHHT--TCHHHHHHHHHHHH-HCSSSCCCHHHHHHHHHTTT---TTCHHHHHHHHHHHH
T ss_pred HHHC--CCHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHh---CCCHHHHHHHHHHHH
Confidence 7644 36777777777776 44 7777777777776 666777766666654
No 248
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=98.06 E-value=3.9e-05 Score=61.53 Aligned_cols=81 Identities=14% Similarity=0.106 Sum_probs=70.2
Q ss_pred hhhhHHHHHHHHhcCH---HHHHHHHHHHHhCCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHH
Q 017811 234 PCHLNMAACLLKLKRY---EEAIGQCSLVLGEDEN-NVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRL 309 (365)
Q Consensus 234 ~~~~nla~~~~kl~~~---~~A~~~~~~aL~~~p~-n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~ 309 (365)
.+.+|+|.|+.+..+. .++|..+...+...|. ....+|.+|.+++.+|+|++|+.+...+|+++|+|..+......
T Consensus 40 ~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~Lk~~ 119 (144)
T 1y8m_A 40 QSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSM 119 (144)
T ss_dssp HHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHHHHHH
Confidence 3488999999998754 5788899999998884 56899999999999999999999999999999999999887776
Q ss_pred HHHHH
Q 017811 310 LAEHE 314 (365)
Q Consensus 310 l~~~~ 314 (365)
+..+.
T Consensus 120 Ie~~i 124 (144)
T 1y8m_A 120 VEDKI 124 (144)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65443
No 249
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.94 E-value=4.6e-05 Score=82.05 Aligned_cols=108 Identities=18% Similarity=0.109 Sum_probs=82.4
Q ss_pred hhhhhhhhhhhhHHHHHHHHHHHHHhhcc-chhhhhhhhHHHHHHH-----hhchhhhHHHHHHHHhcCHHHHHHHHHHH
Q 017811 186 KMDGNALFKEEKLEEAMQQYEMAIAYMGD-DFMFQLFGKYRDMALA-----VKNPCHLNMAACLLKLKRYEEAIGQCSLV 259 (365)
Q Consensus 186 k~~G~~~~~~~~y~~A~~~y~~al~~~~~-~~~~~~~~~~~~~~~~-----~~~~~~~nla~~~~kl~~~~~A~~~~~~a 259 (365)
.+.|..+...|.|++|+..|+++-..... ........ ..+...+ -...+|+++|.++...|+|++|+..|.++
T Consensus 1053 ~eIA~Iai~lglyEEAf~IYkKa~~~~~A~~VLie~i~-nldrAiE~Aervn~p~vWsqLAKAql~~G~~kEAIdsYiKA 1131 (1630)
T 1xi4_A 1053 PDIANIAISNELFEEAFAIFRKFDVNTSAVQVLIEHIG-NLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKA 1131 (1630)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHcCCHHHHHHHHHHHHh-hHHHHHHHHHhcCCHHHHHHHHHHHHhCCCHHHHHHHHHhc
Confidence 44699999999999999999998532221 11110000 1111111 12467999999999999999999999876
Q ss_pred HhCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Q 017811 260 LGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPE 299 (365)
Q Consensus 260 L~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~ 299 (365)
+++.+|++.|.++..+|+|++|+..|..|.+..++
T Consensus 1132 -----dD~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e 1166 (1630)
T 1xi4_A 1132 -----DDPSSYMEVVQAANTSGNWEELVKYLQMARKKARE 1166 (1630)
T ss_pred -----CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhccc
Confidence 89999999999999999999999999999998854
No 250
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=97.85 E-value=8.3e-05 Score=68.23 Aligned_cols=145 Identities=9% Similarity=-0.057 Sum_probs=96.4
Q ss_pred hhhhhhhhhhhhHHHHHHHHHHHHHhhc--cchhhhh-----------hhhHHHHH---HHhh-------chhhhHHHHH
Q 017811 186 KMDGNALFKEEKLEEAMQQYEMAIAYMG--DDFMFQL-----------FGKYRDMA---LAVK-------NPCHLNMAAC 242 (365)
Q Consensus 186 k~~G~~~~~~~~y~~A~~~y~~al~~~~--~~~~~~~-----------~~~~~~~~---~~~~-------~~~~~nla~~ 242 (365)
...|..+...|++++|++.|.++|...| .....-. .+.-...+ .... ..+..+++.+
T Consensus 104 ~~la~i~~~~g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~d~~~~~d~~l~~Laea 183 (310)
T 3mv2_B 104 YLLATAQAILGDLDKSLETCVEGIDNDEAEGTTELLLLAIEVALLNNNVSTASTIFDNYTNAIEDTVSGDNEMILNLAES 183 (310)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCccccccchHHHHHHHHH
Confidence 4677888888888888888888866554 3221100 01111111 1111 2456777655
Q ss_pred --HHHhc--CHHHHHHHHHHHHhCCCC--CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh----------CCCcHHHHHH
Q 017811 243 --LLKLK--RYEEAIGQCSLVLGEDEN--NVKALFRRGKARAELGQTDAAREDFLKAGKF----------APEDKSIARE 306 (365)
Q Consensus 243 --~~kl~--~~~~A~~~~~~aL~~~p~--n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l----------~P~n~~~~~~ 306 (365)
.+..| ++.+|...|++++...|+ +...++. +++.+|+|++|...++.++++ +|+|+.+...
T Consensus 184 ~v~l~~g~~~~q~A~~~f~El~~~~p~~~~~~lLln---~~~~~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~~~~~LaN 260 (310)
T 3mv2_B 184 YIKFATNKETATSNFYYYEELSQTFPTWKTQLGLLN---LHLQQRNIAEAQGIVELLLSDYYSVEQKENAVLYKPTFLAN 260 (310)
T ss_dssp HHHHHHTCSTTTHHHHHHHHHHTTSCSHHHHHHHHH---HHHHHTCHHHHHHHHHHHHSHHHHTTTCHHHHSSHHHHHHH
T ss_pred HHHHHhCCccHHHHHHHHHHHHHhCCCcccHHHHHH---HHHHcCCHHHHHHHHHHHHHhcccccccccCCCCCHHHHHH
Confidence 66567 899999999999888886 3445555 899999999999999988887 5889888877
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccCCCCCcc
Q 017811 307 LRLLAEHEKAVYKKQKEIYKGIFGPRPEPK 336 (365)
Q Consensus 307 l~~l~~~~~~~~~~~k~~y~kmf~~~~~~~ 336 (365)
+..|....++ ...+.+.++....|+..
T Consensus 261 ~i~l~~~lgk---~a~~l~~qL~~~~P~hp 287 (310)
T 3mv2_B 261 QITLALMQGL---DTEDLTNQLVKLDHEHA 287 (310)
T ss_dssp HHHHHHHTTC---TTHHHHHHHHHTTCCCH
T ss_pred HHHHHHHhCh---HHHHHHHHHHHhCCCCh
Confidence 6656555554 34566666666666543
No 251
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=97.83 E-value=0.00012 Score=67.20 Aligned_cols=117 Identities=11% Similarity=0.057 Sum_probs=86.7
Q ss_pred HHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHhCCC--CCHHHHHHHHHHHH
Q 017811 201 AMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGEDE--NNVKALFRRGKARA 278 (365)
Q Consensus 201 A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~~~p--~n~ka~~~~g~a~~ 278 (365)
|+..+++.+...+.... .++.+|.++...|++++|+..|.++|..+| .+..++...+++++
T Consensus 85 a~~~l~~l~~~~~~~~~-----------------~~~~la~i~~~~g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L 147 (310)
T 3mv2_B 85 NIEELENLLKDKQNSPY-----------------ELYLLATAQAILGDLDKSLETCVEGIDNDEAEGTTELLLLAIEVAL 147 (310)
T ss_dssp CCHHHHHTTTTSCCCHH-----------------HHHHHHHHHHHHTCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCcH-----------------HHHHHHHHHHHcCCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHH
Confidence 78888887765433321 256889999999999999999999999997 99999999999999
Q ss_pred HcCCHHHHHHHHHHHHhhCCC----cHHHHHHHHHH--HHHHH-HHHHHHHHHHhcccCCCCC
Q 017811 279 ELGQTDAAREDFLKAGKFAPE----DKSIARELRLL--AEHEK-AVYKKQKEIYKGIFGPRPE 334 (365)
Q Consensus 279 ~l~~~~~A~~~l~~al~l~P~----n~~~~~~l~~l--~~~~~-~~~~~~k~~y~kmf~~~~~ 334 (365)
.+|+.+.|.+.++++.+.+|+ +..+...|... ....+ +..+..-..|..+.+..|+
T Consensus 148 ~~~r~d~A~k~l~~~~~~~~d~~~~~d~~l~~Laea~v~l~~g~~~~q~A~~~f~El~~~~p~ 210 (310)
T 3mv2_B 148 LNNNVSTASTIFDNYTNAIEDTVSGDNEMILNLAESYIKFATNKETATSNFYYYEELSQTFPT 210 (310)
T ss_dssp HTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTCSTTTHHHHHHHHHHTTSCS
T ss_pred HCCCHHHHHHHHHHHHhcCccccccchHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhCCC
Confidence 999999999999999999983 23333344322 33333 1233345668888777765
No 252
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.79 E-value=0.00017 Score=53.90 Aligned_cols=71 Identities=8% Similarity=-0.017 Sum_probs=63.8
Q ss_pred CCCCHHHHHHHHHHHHHcCC---HHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCC
Q 017811 263 DENNVKALFRRGKARAELGQ---TDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKKQKEIYKGIFGPRPE 334 (365)
Q Consensus 263 ~p~n~ka~~~~g~a~~~l~~---~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~~~~~~~~~k~~y~kmf~~~~~ 334 (365)
+|+|+..++.+|.+++..++ .++|...|+++|.++|++..+...++.+....+++.++. ..|.+++...|.
T Consensus 2 ~p~~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai-~~w~~~l~~~p~ 75 (93)
T 3bee_A 2 NAVTATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAI-DTWVLLLDSNDP 75 (93)
T ss_dssp CCCCHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHH-HHHHHHHTCCCT
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHH-HHHHHHHhhCCC
Confidence 68999999999999987777 799999999999999999999999999988877777555 459999999887
No 253
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=97.75 E-value=0.00036 Score=62.96 Aligned_cols=110 Identities=11% Similarity=-0.070 Sum_probs=86.7
Q ss_pred CHHHHHHHHHHHHhCCCC--CHHHHHHHHHHHHHc-----CCHHHHHHHHHHHHhhCCCc-HHHHHHHHHHHHHHHHHHH
Q 017811 248 RYEEAIGQCSLVLGEDEN--NVKALFRRGKARAEL-----GQTDAAREDFLKAGKFAPED-KSIARELRLLAEHEKAVYK 319 (365)
Q Consensus 248 ~~~~A~~~~~~aL~~~p~--n~ka~~~~g~a~~~l-----~~~~~A~~~l~~al~l~P~n-~~~~~~l~~l~~~~~~~~~ 319 (365)
....|....++||++||+ +-.||..+|..|..+ |+.++|...|++|++++|+. ..+...............+
T Consensus 178 ~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~~~gd~~ 257 (301)
T 3u64_A 178 TVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDPDHHITYADALCIPLNNRA 257 (301)
T ss_dssp HHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTTTTTCHH
T ss_pred hHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHhcCCHH
Confidence 467899999999999999 567999999999996 99999999999999999974 8888888876555434445
Q ss_pred HHHHHHhcccCCCCCcccc----chhHHHHHHHHHHHHHHHH
Q 017811 320 KQKEIYKGIFGPRPEPKQK----KNWLIIFWQLLVSLVLGLF 357 (365)
Q Consensus 320 ~~k~~y~kmf~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 357 (365)
..++.+.+.+..++...+. ...+.....||+-.+..+|
T Consensus 258 ~a~~~L~kAL~a~p~~~P~~~lan~~~q~eA~~LL~~~~d~F 299 (301)
T 3u64_A 258 GFDEALDRALAIDPESVPHNKLLVILSQKRARWLKAHVQDFF 299 (301)
T ss_dssp HHHHHHHHHHHCCGGGCSSCHHHHHHHHHHHHHHHHTHHHHC
T ss_pred HHHHHHHHHHcCCCCCCCChhHHHHHHHHHHHHHHHHhHHhc
Confidence 5567788888887764222 4455566677777766665
No 254
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=97.75 E-value=0.00029 Score=58.02 Aligned_cols=119 Identities=11% Similarity=0.034 Sum_probs=88.1
Q ss_pred HhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHhCC
Q 017811 184 RRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGED 263 (365)
Q Consensus 184 ~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~~~ 263 (365)
.+.+....++..+.|+.|+-.+..++.+...+...-. -.....++..+|.+++..++|..|...|++||.+.
T Consensus 22 ~l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~s--------p~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~ 93 (167)
T 3ffl_A 22 NVIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFS--------PPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQK 93 (167)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSC--------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCccccc--------HHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHH
Confidence 4567778899999999999999998888654332100 12234568999999999999999999999987432
Q ss_pred ---CC----------------------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHH
Q 017811 264 ---EN----------------------NVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLA 311 (365)
Q Consensus 264 ---p~----------------------n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~ 311 (365)
+. .....|++|.||.+++++++|+..++..-.. -..+.+...|++++
T Consensus 94 k~l~k~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~Ip~k-~Rt~kvnm~LakLy 165 (167)
T 3ffl_A 94 KALSKTSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDGIPSR-QRTPKINMLLANLY 165 (167)
T ss_dssp HCC--------------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHTSCGG-GCCHHHHHHHHHHC
T ss_pred HHHhcCCCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHhcCCch-hcCHHHHHHHHHHh
Confidence 11 1268899999999999999999998754221 13566666666653
No 255
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=97.52 E-value=0.00021 Score=68.90 Aligned_cols=94 Identities=13% Similarity=0.031 Sum_probs=69.6
Q ss_pred HHHHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHH
Q 017811 178 RIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCS 257 (365)
Q Consensus 178 ~~~~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~ 257 (365)
....+..+...|..|..+|+|++|+.+|+++|.+......- . .......++|||.+|..+|+|++|+..+.
T Consensus 325 h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~----~-----Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~ 395 (429)
T 3qwp_A 325 NIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPG----S-----HPVRGVQVMKVGKLQLHQGMFPQAMKNLR 395 (429)
T ss_dssp SHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCS----S-----CHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCC----C-----ChHHHHHHHHHHHHHHhcCCHHHHHHHHH
Confidence 34556677889999999999999999999999886321100 0 01124569999999999999999999999
Q ss_pred HHHhC-----CCCCH---HHHHHHHHHHHHc
Q 017811 258 LVLGE-----DENNV---KALFRRGKARAEL 280 (365)
Q Consensus 258 ~aL~~-----~p~n~---ka~~~~g~a~~~l 280 (365)
+|+++ -|+++ ..+..++.++..+
T Consensus 396 ~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~ 426 (429)
T 3qwp_A 396 LAFDIMRVTHGREHSLIEDLILLLEECDANI 426 (429)
T ss_dssp HHHHHHHHHTCTTSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCChHHHHHHHHHHHHHHHH
Confidence 99864 56654 4556666666544
No 256
>3gty_X Trigger factor, TF; chaperone-client complex, cell cycle, cell division, chapero isomerase, rotamase, ribonucleoprotein, binding; 3.40A {Thermotoga maritima} PDB: 3gu0_A
Probab=97.49 E-value=0.00019 Score=69.11 Aligned_cols=75 Identities=5% Similarity=0.050 Sum_probs=61.6
Q ss_pred CCCCCEEEEEEEEEEcCCCeeeccCcCCCCcceeecCCCCchhhhHHHHHhcCCcCcEEEEEeccccccCCCCCCCCCCC
Q 017811 67 PSKYSTCFLHYRAWAESTRHKFDDTWLEQQPLEMVLGKEKKEMTGLAIGVSSMKAGEHALLHVGWELGYGKEGSFSFPNV 146 (365)
Q Consensus 67 p~~g~~v~v~y~~~~~~~g~~fd~s~~~~~p~~f~lg~~~~~i~g~e~~l~~Mk~GE~~~~~i~~~~~yg~~g~~~~~~i 146 (365)
...||.|+|+|+++. + |..|+++. +.++.|.+|.| . + |+.+|.||++||...|.+..
T Consensus 155 a~~gD~V~id~~~~~-d-G~~~~~~~--~~~~~l~~g~~-~--~-fe~~liG~k~Ge~~~~~vtF--------------- 211 (433)
T 3gty_X 155 AEAGDLVRVNMEVYN-E-EGKKLTSR--EYEYVISEDED-R--P-FVKDLVGKKKGDVVEIEREY--------------- 211 (433)
T ss_dssp CCTTSEEEEEEEEEC-T-TSCEEEEE--EEEEECCSSCC-C--T-THHHHTTCCTTCEEEEEEEE---------------
T ss_pred cCCCCEEEEEEEEEE-C-CEECcCCC--CCCeEEEecCC-c--h-HHHHhCCCCCCceEEEEEee---------------
Confidence 568999999999984 4 89998753 36888999988 4 3 99999999999999999843
Q ss_pred CCCCcEEEEEEEEeeecCc
Q 017811 147 SPMADLVYEVVLIGFDETK 165 (365)
Q Consensus 147 p~~~~l~~~iel~~~~~~~ 165 (365)
+|.+..|.|.+..+....
T Consensus 212 -aGk~a~F~VtV~~Ik~~~ 229 (433)
T 3gty_X 212 -EGKKYTYKLEVEEVYKRT 229 (433)
T ss_dssp -TTEEEEEEEEEEEEEEEC
T ss_pred -CCCeEEEEEEEEEEEEec
Confidence 356789999999887643
No 257
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=97.48 E-value=0.00023 Score=68.68 Aligned_cols=81 Identities=6% Similarity=-0.046 Sum_probs=62.2
Q ss_pred HHHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHH
Q 017811 179 IGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSL 258 (365)
Q Consensus 179 ~~~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~ 258 (365)
...+..+.+.|..|..+|+|++|+.+|+++|.+......- + .......++|||.+|..+|+|++|+..+.+
T Consensus 337 p~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~----~-----Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~ 407 (433)
T 3qww_A 337 VYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPV----Y-----SLNVASMWLKLGRLYMGLENKAAGEKALKK 407 (433)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCS----S-----CHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCC----C-----ChHHHHHHHHHHHHHHhccCHHHHHHHHHH
Confidence 4456667789999999999999999999999886321100 0 001245699999999999999999999999
Q ss_pred HHhC-----CCCCHH
Q 017811 259 VLGE-----DENNVK 268 (365)
Q Consensus 259 aL~~-----~p~n~k 268 (365)
||++ .|+++.
T Consensus 408 Al~i~~~~lG~~Hp~ 422 (433)
T 3qww_A 408 AIAIMEVAHGKDHPY 422 (433)
T ss_dssp HHHHHHHHTCTTCHH
T ss_pred HHHHHHHHcCCCChH
Confidence 9864 566654
No 258
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=97.46 E-value=0.0019 Score=61.27 Aligned_cols=115 Identities=12% Similarity=0.017 Sum_probs=94.6
Q ss_pred HHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhh-----hhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHH
Q 017811 181 AADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQL-----FGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQ 255 (365)
Q Consensus 181 ~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~ 255 (365)
....+...|......++...|+..|.+|+.+.......+. .......+......+...++.+++.+|++.+|+..
T Consensus 114 ~f~~l~~~~~~~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~~~ 193 (388)
T 2ff4_A 114 RFVAEKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAE 193 (388)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
Confidence 3455556666667788999999999999998755432221 13345667777888889999999999999999999
Q ss_pred HHHHHhCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q 017811 256 CSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGK 295 (365)
Q Consensus 256 ~~~aL~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~ 295 (365)
+..++..+|-+..++..+-.+|...|+..+|+..|.++-.
T Consensus 194 l~~~~~~~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 194 LEALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVKT 233 (388)
T ss_dssp HHHHHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999987644
No 259
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=97.27 E-value=0.00027 Score=67.91 Aligned_cols=149 Identities=11% Similarity=-0.006 Sum_probs=108.7
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhh--h---hhhhHHHH-HHH----hhchhhhHHHHHHHH
Q 017811 176 EERIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMF--Q---LFGKYRDM-ALA----VKNPCHLNMAACLLK 245 (365)
Q Consensus 176 ~e~~~~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~--~---~~~~~~~~-~~~----~~~~~~~nla~~~~k 245 (365)
..-...+..+...|..+++.|+|+.|+..|.+|. .+..+.. . ..++.... ... ....-+..+..+|.+
T Consensus 142 ~~~Y~~a~n~~~LA~~L~~Lg~yq~AVea~~KA~--~~~~Wk~v~~aCv~~~ef~lA~~~~l~L~~~ad~l~~lv~~Yek 219 (449)
T 1b89_A 142 KLLYNNVSNFGRLASTLVHLGEYQAAVDGARKAN--STRTWKEVCFACVDGKEFRLAQMCGLHIVVHADELEELINYYQD 219 (449)
T ss_dssp HHHHHHTTCHHHHHHHHHTTTCHHHHHHHHHHHT--CHHHHHHHHHHHHHTTCHHHHHHTTTTTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHhhhHHHHHHHHHHhccHHHHHHHHHHcC--CchhHHHHHHHHHHcCcHHHHHHHHHHHHhCHhhHHHHHHHHHH
Confidence 3455677788899999999999999999999993 2211100 0 00000000 000 000113346689999
Q ss_pred hcCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH--cCCHHHHHHHHHHHHhhCC-----CcHHHHHHHHHHHHHHHHHH
Q 017811 246 LKRYEEAIGQCSLVLGEDENNVKALFRRGKARAE--LGQTDAAREDFLKAGKFAP-----EDKSIARELRLLAEHEKAVY 318 (365)
Q Consensus 246 l~~~~~A~~~~~~aL~~~p~n~ka~~~~g~a~~~--l~~~~~A~~~l~~al~l~P-----~n~~~~~~l~~l~~~~~~~~ 318 (365)
.|.|++|+..++++|.+++.+...+..+|.+|.. .++..++++.|...+.+.| .+...+.++..+.....++.
T Consensus 220 ~G~~eEai~lLe~aL~le~ah~~~ftel~il~~ky~p~k~~ehl~~~~~~ini~k~~~~~~~~~~w~e~~~ly~~~~e~d 299 (449)
T 1b89_A 220 RGYFEELITMLEAALGLERAHMGMFTELAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYD 299 (449)
T ss_dssp TTCHHHHHHHHHHHTTSTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHSTTSCHHHHHHHHHTTTCHHHHHHHHHHTTCHH
T ss_pred CCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHhhchHH
Confidence 9999999999999999999999999999988766 5678889999988888888 78888889999988888887
Q ss_pred HHHHHHHh
Q 017811 319 KKQKEIYK 326 (365)
Q Consensus 319 ~~~k~~y~ 326 (365)
.+...|..
T Consensus 300 ~A~~tm~~ 307 (449)
T 1b89_A 300 NAIITMMN 307 (449)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 77665443
No 260
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=97.20 E-value=0.0011 Score=52.18 Aligned_cols=43 Identities=21% Similarity=0.164 Sum_probs=38.1
Q ss_pred chhhhHHHHHHHHhcCHHHHHHHHHHHHhCCCCCHHHHHHHHH
Q 017811 233 NPCHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGK 275 (365)
Q Consensus 233 ~~~~~nla~~~~kl~~~~~A~~~~~~aL~~~p~n~ka~~~~g~ 275 (365)
..+++.||..++++|+|.+|+.+|+.+|+.+|+|..|.--+..
T Consensus 74 Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~eP~n~QA~~Lk~~ 116 (126)
T 1nzn_A 74 RDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERL 116 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 4579999999999999999999999999999999987755443
No 261
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=97.16 E-value=0.0022 Score=50.72 Aligned_cols=64 Identities=11% Similarity=0.075 Sum_probs=50.0
Q ss_pred hHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHhCCCCCHHHHHHHHHH
Q 017811 197 KLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKA 276 (365)
Q Consensus 197 ~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~~~p~n~ka~~~~g~a 276 (365)
+..++|..+...++..|.. ...+++.||..++++|+|..|..+++.+|+.+|+|..|.--+..+
T Consensus 58 d~~~GI~LLe~l~~~~~~~----------------~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~Lk~~I 121 (134)
T 3o48_A 58 DERLGVKILTDIYKEAESR----------------RRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSMV 121 (134)
T ss_dssp HHHHHHHHHHHHHHHCGGG----------------HHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCcch----------------hHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHHHHHHH
Confidence 4456777777766654422 345799999999999999999999999999999999876654443
No 262
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=97.04 E-value=0.0028 Score=50.72 Aligned_cols=63 Identities=11% Similarity=0.076 Sum_probs=49.4
Q ss_pred hHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHhCCCCCHHHHHHHHH
Q 017811 197 KLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGK 275 (365)
Q Consensus 197 ~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~~~p~n~ka~~~~g~ 275 (365)
+-.++|..++..+...|.. ...|++.||..++++|+|.+|..+|+.+|+.+|+|..|.--+..
T Consensus 57 di~~GI~LLe~l~~~~~~~----------------~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~Lk~~ 119 (144)
T 1y8m_A 57 DERLGVKILTDIYKEAESR----------------RRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSM 119 (144)
T ss_dssp HHHHHHHHHHHHHHHCCST----------------HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCccc----------------hhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHHHHHH
Confidence 3446777777776654432 24479999999999999999999999999999999887655443
No 263
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=96.95 E-value=0.014 Score=59.29 Aligned_cols=99 Identities=5% Similarity=-0.046 Sum_probs=78.3
Q ss_pred hhhHHHHHHHHhcCHHHHHHHHHHHHhC-CCCCHHHHHHHHHHHHHcCC-HHHHHHHHHHHHhhCCCcHHHHHHHHHHHH
Q 017811 235 CHLNMAACLLKLKRYEEAIGQCSLVLGE-DENNVKALFRRGKARAELGQ-TDAAREDFLKAGKFAPEDKSIARELRLLAE 312 (365)
Q Consensus 235 ~~~nla~~~~kl~~~~~A~~~~~~aL~~-~p~n~ka~~~~g~a~~~l~~-~~~A~~~l~~al~l~P~n~~~~~~l~~l~~ 312 (365)
++...+.+..+.+..+.|...+.+|++. .+...+.|...|......++ ++.|...|.++++..|+++........+..
T Consensus 436 vWi~y~~~erR~~~l~~AR~vf~~A~~~~~~~~~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p~~~~~w~~y~~fe~ 515 (679)
T 4e6h_A 436 VYCVYMNTMKRIQGLAASRKIFGKCRRLKKLVTPDIYLENAYIEYHISKDTKTACKVLELGLKYFATDGEYINKYLDFLI 515 (679)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHHTGGGSCTHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCchHHHHHHHHHHH
Confidence 4666677777889999999999999988 55567778777777767654 999999999999999999988766665544
Q ss_pred HHHHHHHHHHHHHhcccCCCCC
Q 017811 313 HEKAVYKKQKEIYKGIFGPRPE 334 (365)
Q Consensus 313 ~~~~~~~~~k~~y~kmf~~~~~ 334 (365)
..+ ...+.|..|.+.+...++
T Consensus 516 ~~~-~~~~AR~lferal~~~~~ 536 (679)
T 4e6h_A 516 YVN-EESQVKSLFESSIDKISD 536 (679)
T ss_dssp HHT-CHHHHHHHHHHHTTTSSS
T ss_pred hCC-CHHHHHHHHHHHHHhcCC
Confidence 333 356788999999988775
No 264
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=96.67 E-value=0.0086 Score=60.96 Aligned_cols=136 Identities=10% Similarity=-0.017 Sum_probs=99.5
Q ss_pred hhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhc-CHHHHHHHHHHHHhCC
Q 017811 185 RKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLK-RYEEAIGQCSLVLGED 263 (365)
Q Consensus 185 ~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~-~~~~A~~~~~~aL~~~ 263 (365)
+...++...+.+..+.|...|.+|+...|... ..+|...|....+.+ +++.|...|..+|+..
T Consensus 437 Wi~y~~~erR~~~l~~AR~vf~~A~~~~~~~~----------------~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~ 500 (679)
T 4e6h_A 437 YCVYMNTMKRIQGLAASRKIFGKCRRLKKLVT----------------PDIYLENAYIEYHISKDTKTACKVLELGLKYF 500 (679)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHHHHTGGGSC----------------THHHHHHHHHHHTTTSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCC----------------hHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHC
Confidence 44444555567888999999999998743211 123666666666665 4999999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC---cHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCccc
Q 017811 264 ENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPE---DKSIARELRLLAEHEKAVYKKQKEIYKGIFGPRPEPKQ 337 (365)
Q Consensus 264 p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~---n~~~~~~l~~l~~~~~~~~~~~k~~y~kmf~~~~~~~~ 337 (365)
|+++..+...+......|+.+.|...|++|+...|+ ...+...........+. .+..++++++|....|+...
T Consensus 501 p~~~~~w~~y~~fe~~~~~~~~AR~lferal~~~~~~~~~~~lw~~~~~fE~~~G~-~~~~~~v~~R~~~~~P~~~~ 576 (679)
T 4e6h_A 501 ATDGEYINKYLDFLIYVNEESQVKSLFESSIDKISDSHLLKMIFQKVIFFESKVGS-LNSVRTLEKRFFEKFPEVNK 576 (679)
T ss_dssp TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHTTTSSSTTHHHHHHHHHHHHHHHTCC-SHHHHHHHHHHHHHSTTCCH
T ss_pred CCchHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcCC-HHHHHHHHHHHHHhCCCCcH
Confidence 999998889999999999999999999999999884 45555555555443333 33566777777766676543
No 265
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=96.55 E-value=0.0085 Score=49.25 Aligned_cols=96 Identities=15% Similarity=0.148 Sum_probs=62.3
Q ss_pred HHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhcc---chhh----hhhhhHH-HHHHHhhchhhhHHHHHHHHhcCHHHH
Q 017811 181 AADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGD---DFMF----QLFGKYR-DMALAVKNPCHLNMAACLLKLKRYEEA 252 (365)
Q Consensus 181 ~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~---~~~~----~~~~~~~-~~~~~~~~~~~~nla~~~~kl~~~~~A 252 (365)
.+..+.-.|+.+|..++|.+|...|++||.+... .... ....... ......-..+.+.+|.||++++++.+|
T Consensus 62 ~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~A 141 (167)
T 3ffl_A 62 KYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDA 141 (167)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC--------------------CCCCHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHH
Confidence 3667788999999999999999999999877642 1100 0000000 000000124688999999999999999
Q ss_pred HHHHHHHHhCCCCCHHHHHHHHHHH
Q 017811 253 IGQCSLVLGEDENNVKALFRRGKAR 277 (365)
Q Consensus 253 ~~~~~~aL~~~p~n~ka~~~~g~a~ 277 (365)
+...+.+ -....+++.-.-+|+.|
T Consensus 142 i~~Le~I-p~k~Rt~kvnm~LakLy 165 (167)
T 3ffl_A 142 IAILDGI-PSRQRTPKINMLLANLY 165 (167)
T ss_dssp HHHHHTS-CGGGCCHHHHHHHHHHC
T ss_pred HHHHhcC-CchhcCHHHHHHHHHHh
Confidence 9976543 22335777777777654
No 266
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=96.12 E-value=0.1 Score=42.15 Aligned_cols=115 Identities=10% Similarity=0.044 Sum_probs=85.5
Q ss_pred HHHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHH
Q 017811 179 IGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSL 258 (365)
Q Consensus 179 ~~~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~ 258 (365)
...+..+-..|+.+-. +-.++-+..|++|+...|... ...- .-.+.++.+.|.- ..+++.++|...|+.
T Consensus 17 ~~yl~llE~~g~p~~d-~~l~rlrd~YerAia~~Pp~k-~~~w--------rrYI~LWIrYA~~-~ei~D~d~aR~vy~~ 85 (161)
T 4h7y_A 17 LSLLLKLEKNSVPLSD-ALLNKLIGRYSQAIEALPPDK-YGQN--------ESFARIQVRFAEL-KAIQEPDDARDYFQM 85 (161)
T ss_dssp HHHHHHHHHHTCSCCH-HHHHHHHHHHHHHHHHSCGGG-GTTC--------HHHHHHHHHHHHH-HHHHCGGGCHHHHHH
T ss_pred HHHHHHHHHcCCCchh-hHHHHHHHHHHHHHHcCCccc-cccH--------HHHHHHHHHHHHH-HHhcCHHHHHHHHHH
Confidence 3334444444555444 555788899999999998752 1100 1123456666644 677999999999999
Q ss_pred HHhCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHH
Q 017811 259 VLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIA 304 (365)
Q Consensus 259 aL~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~ 304 (365)
++.+....+|.|.-.|+--...|+...|...+.+|+.+.|...+..
T Consensus 86 a~~~hKkFAKiwi~~AqFEiRqgnl~kARkILg~AiG~~~k~~~~l 131 (161)
T 4h7y_A 86 ARANCKKFAFVHISFAQFELSQGNVKKSKQLLQKAVERGAVPLEML 131 (161)
T ss_dssp HHHHCTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBCHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHHcccHHHHHHHHHHHhccCCCcHHHH
Confidence 9988878889999999999999999999999999999999876543
No 267
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=95.94 E-value=0.021 Score=53.37 Aligned_cols=69 Identities=10% Similarity=0.047 Sum_probs=57.1
Q ss_pred hhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHhCCCCC
Q 017811 187 MDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGEDENN 266 (365)
Q Consensus 187 ~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~~~p~n 266 (365)
..|..++..|++++|+..+++|+.++|. +. .|.-+|.++.-.|++++|+..+.+|+.++|..
T Consensus 282 alal~~l~~gd~d~A~~~l~rAl~Ln~s-~~-----------------a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~ 343 (372)
T 3ly7_A 282 IKAVSALVKGKTDESYQAINTGIDLEMS-WL-----------------NYVLLGKVYEMKGMNREAADAYLTAFNLRPGA 343 (372)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHCCC-HH-----------------HHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHhcCCC-HH-----------------HHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCc
Confidence 3556677789999999999999999864 21 37788999999999999999999999999966
Q ss_pred HHHHHHHH
Q 017811 267 VKALFRRG 274 (365)
Q Consensus 267 ~ka~~~~g 274 (365)
. .|+...
T Consensus 344 ~-t~~~~~ 350 (372)
T 3ly7_A 344 N-TLYWIE 350 (372)
T ss_dssp H-HHHHHH
T ss_pred C-hHHHHh
Confidence 5 555433
No 268
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=95.32 E-value=0.071 Score=54.59 Aligned_cols=58 Identities=12% Similarity=0.065 Sum_probs=51.9
Q ss_pred hhHHHHHHHHhcCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 017811 236 HLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKA 293 (365)
Q Consensus 236 ~~nla~~~~kl~~~~~A~~~~~~aL~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~a 293 (365)
+.--|.-++..|+|+-|+..+++|+..-|....+|++++.+|..+|+|+.|+-.+..+
T Consensus 340 L~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 340 LNIQTNFLLNRGDYELALGVSNTSTELALDSFESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHHHHHHHhccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 3334666677899999999999999999999999999999999999999999888776
No 269
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=95.24 E-value=0.14 Score=45.45 Aligned_cols=69 Identities=17% Similarity=0.089 Sum_probs=62.6
Q ss_pred HHHHhcCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHH
Q 017811 242 CLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLL 310 (365)
Q Consensus 242 ~~~kl~~~~~A~~~~~~aL~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l 310 (365)
-.++.+..++|+..+...++.+|.|.+....+-+.+.-.|+|+.|..-++.+.+++|+.......++.+
T Consensus 6 ~ll~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~~a~~yr~l 74 (273)
T 1zbp_A 6 NALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGASQLRHL 74 (273)
T ss_dssp HHTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHHHHHHHHH
T ss_pred HHHhCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhHHHHHHHHH
Confidence 456889999999999999999999999999999999999999999999999999999987766565544
No 270
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=95.04 E-value=0.77 Score=44.57 Aligned_cols=141 Identities=12% Similarity=0.043 Sum_probs=94.0
Q ss_pred hhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhh----h---hhHHHHHHH----------------hhchhhhHHHH
Q 017811 185 RKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQL----F---GKYRDMALA----------------VKNPCHLNMAA 241 (365)
Q Consensus 185 ~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~----~---~~~~~~~~~----------------~~~~~~~nla~ 241 (365)
+..-+.-+...|+.+.|...|.+|+.. |.+...-. . ++..+.+.. ....++.+.+.
T Consensus 216 W~~ya~~~~~~~~~~~ar~i~erAi~~-P~~~~l~~~y~~~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lw~~y~~ 294 (493)
T 2uy1_A 216 YFFYSEYLIGIGQKEKAKKVVERGIEM-SDGMFLSLYYGLVMDEEAVYGDLKRKYSMGEAESAEKVFSKELDLLRINHLN 294 (493)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH-CCSSHHHHHHHHHTTCTHHHHHHHHHTC----------CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhC-CCcHHHHHHHHhhcchhHHHHHHHHHHHhhccchhhhhcccccHHHHHHHHH
Confidence 444556667788999999999999999 87543110 0 010011110 01245666777
Q ss_pred HHHHhcCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHcC-CHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHH
Q 017811 242 CLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELG-QTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAVYKK 320 (365)
Q Consensus 242 ~~~kl~~~~~A~~~~~~aL~~~p~n~ka~~~~g~a~~~l~-~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~~~~~~~~ 320 (365)
...+.+..+.|...+.+| ...+.....|...|..-..++ +.+.|...|+.+++..|+++.............++ ..+
T Consensus 295 ~~~r~~~~~~AR~i~~~A-~~~~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~~~~~~~~yid~e~~~~~-~~~ 372 (493)
T 2uy1_A 295 YVLKKRGLELFRKLFIEL-GNEGVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPDSTLLKEEFFLFLLRIGD-EEN 372 (493)
T ss_dssp HHHHHHCHHHHHHHHHHH-TTSCCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTC-HHH
T ss_pred HHHHcCCHHHHHHHHHHh-hCCCCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCC-HHH
Confidence 777788999999999999 444445667766676666666 69999999999999999988765444433333222 345
Q ss_pred HHHHHhcc
Q 017811 321 QKEIYKGI 328 (365)
Q Consensus 321 ~k~~y~km 328 (365)
.|..|.++
T Consensus 373 aR~l~er~ 380 (493)
T 2uy1_A 373 ARALFKRL 380 (493)
T ss_dssp HHHHHHHS
T ss_pred HHHHHHHH
Confidence 67778887
No 271
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=95.01 E-value=0.31 Score=47.49 Aligned_cols=79 Identities=6% Similarity=-0.073 Sum_probs=69.0
Q ss_pred hhhhHHHHHHHHhcCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHH
Q 017811 234 PCHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAE 312 (365)
Q Consensus 234 ~~~~nla~~~~kl~~~~~A~~~~~~aL~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~ 312 (365)
.++..||...--...+..|..+|.+|+.+.|++-.+|..+|......|++-+|+.+|.+++......+.+...|..+..
T Consensus 153 r~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~Pf~~a~~nL~~~f~ 231 (497)
T 1ya0_A 153 HCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALS 231 (497)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHHH
T ss_pred HHHHHcccHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHhcccccHHHHHHHHHHHhcCCCChhHHHHHHHHHH
Confidence 3566677776667788999999999999999999999999999999999999999999999987777888888876643
No 272
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=94.56 E-value=0.44 Score=46.32 Aligned_cols=57 Identities=5% Similarity=-0.121 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHhCCCCCHHHHHH
Q 017811 198 LEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFR 272 (365)
Q Consensus 198 y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~~~p~n~ka~~~ 272 (365)
..+....|++|+...|... .++++.|..+...|+.++|...+.+|+.. |.+...++.
T Consensus 195 ~~Rv~~~ye~al~~~p~~~-----------------~lW~~ya~~~~~~~~~~~ar~i~erAi~~-P~~~~l~~~ 251 (493)
T 2uy1_A 195 ESRMHFIHNYILDSFYYAE-----------------EVYFFYSEYLIGIGQKEKAKKVVERGIEM-SDGMFLSLY 251 (493)
T ss_dssp HHHHHHHHHHHHHHTTTCH-----------------HHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CCSSHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCH-----------------HHHHHHHHHHHHcCCHHHHHHHHHHHHhC-CCcHHHHHH
Confidence 3455677888888777642 35888899999999999999999999999 987654443
No 273
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=94.51 E-value=0.39 Score=39.55 Aligned_cols=69 Identities=14% Similarity=0.100 Sum_probs=56.1
Q ss_pred hhHHHHHHHHhcCHHHHHHHHHHHHh--C---------------CCCCHHH-HHHHHHHHHHcCCHHHHHHHHHHHHhhC
Q 017811 236 HLNMAACLLKLKRYEEAIGQCSLVLG--E---------------DENNVKA-LFRRGKARAELGQTDAAREDFLKAGKFA 297 (365)
Q Consensus 236 ~~nla~~~~kl~~~~~A~~~~~~aL~--~---------------~p~n~ka-~~~~g~a~~~l~~~~~A~~~l~~al~l~ 297 (365)
.+--+.||.++++|..|+...+..|+ . ||.+... +.-+|..+...|+-++|+..|......+
T Consensus 65 ~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~~d~~~~~ffvd~~DkEfFy~l~a~lltq~g~r~EaI~y~~~Sf~~~ 144 (242)
T 3kae_A 65 KYYESLCYKKKKDYKKAIKSLESILEGKVERDPDVDARIQEMFVDPGDEEFFESLLGDLCTLSGYREEGIGHYVRSFGKS 144 (242)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCCTTCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccccCcccccccceeeeccchHHHHHHHHHHHHHHhcCHHHhhhHhhhhcCCc
Confidence 55678999999999999999999982 2 2344444 4468999999999999999999999998
Q ss_pred CCcHHHH
Q 017811 298 PEDKSIA 304 (365)
Q Consensus 298 P~n~~~~ 304 (365)
|=-+.+.
T Consensus 145 ~lf~~vE 151 (242)
T 3kae_A 145 FLFSPVE 151 (242)
T ss_dssp CCHHHHH
T ss_pred cccchHH
Confidence 8655554
No 274
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=94.29 E-value=0.28 Score=46.27 Aligned_cols=99 Identities=12% Similarity=-0.072 Sum_probs=77.6
Q ss_pred hhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHhCC---
Q 017811 187 MDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGED--- 263 (365)
Q Consensus 187 ~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~~~--- 263 (365)
..|..|+..|+|.+|+..+.+.+..+....+ ......+|......|..++++.++...+.++....
T Consensus 104 kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd-----------~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai 172 (394)
T 3txn_A 104 RLIALYFDTALYTEALALGAQLLRELKKLDD-----------KNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAI 172 (394)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHTTSSC-----------THHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhcccc-----------chhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccC
Confidence 5788999999999999999999988765211 12345678899999999999999999999886432
Q ss_pred -C-CCH--HHHHHHHHHHH-HcCCHHHHHHHHHHHHhh
Q 017811 264 -E-NNV--KALFRRGKARA-ELGQTDAAREDFLKAGKF 296 (365)
Q Consensus 264 -p-~n~--ka~~~~g~a~~-~l~~~~~A~~~l~~al~l 296 (365)
+ ... .....-|.+++ ..++|..|...|-.++.-
T Consensus 173 ~~~p~i~a~i~~~~Gi~~l~~~rdyk~A~~~F~eaf~~ 210 (394)
T 3txn_A 173 YCPPKVQGALDLQSGILHAADERDFKTAFSYFYEAFEG 210 (394)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhhHHHHHhccCHHHHHHHHHHHHhc
Confidence 1 122 34455788888 899999999999998753
No 275
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=93.60 E-value=0.16 Score=48.62 Aligned_cols=99 Identities=8% Similarity=-0.126 Sum_probs=77.2
Q ss_pred hhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHhC--
Q 017811 185 RKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGE-- 262 (365)
Q Consensus 185 ~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~~-- 262 (365)
+...|..+++.|++..|++.|.++......... ...+++++..+++..++|..+..++.++..+
T Consensus 134 ~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~--------------kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~ 199 (429)
T 4b4t_R 134 WINLGEYYAQIGDKDNAEKTLGKSLSKAISTGA--------------KIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIE 199 (429)
T ss_dssp CHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCS--------------HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhcCChHH--------------HHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhh
Confidence 457899999999999999999999887654311 2456888889999999999999999998543
Q ss_pred -CCC-CH--HHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Q 017811 263 -DEN-NV--KALFRRGKARAELGQTDAAREDFLKAGKFA 297 (365)
Q Consensus 263 -~p~-n~--ka~~~~g~a~~~l~~~~~A~~~l~~al~l~ 297 (365)
.++ .. +.....|.+++..++|..|...|..++.-.
T Consensus 200 ~~~d~~~~~~lk~~~gl~~l~~r~f~~Aa~~f~e~~~t~ 238 (429)
T 4b4t_R 200 KGGDWERRNRYKTYYGIHCLAVRNFKEAAKLLVDSLATF 238 (429)
T ss_dssp TCCCTHHHHHHHHHHHHGGGGTSCHHHHHHHHHHHHHHS
T ss_pred cCCCHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHhccC
Confidence 222 12 345567788889999999999998876543
No 276
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=93.44 E-value=0.15 Score=52.17 Aligned_cols=59 Identities=22% Similarity=0.279 Sum_probs=51.9
Q ss_pred HhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHH
Q 017811 184 RRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLV 259 (365)
Q Consensus 184 ~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~a 259 (365)
-+..++..+..+|+|+.|+.+-++|+.+.|.... +++.||.||.++|+|+.|+-..+.+
T Consensus 339 LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF~-----------------tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 339 LLNIQTNFLLNRGDYELALGVSNTSTELALDSFE-----------------SWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHH-----------------HHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHHHHHHHHhccCcHHHHHHHHHHHHhcCchhhH-----------------HHHHHHHHHHHhccHHHHHHHHhcC
Confidence 4566788888999999999999999999998754 3999999999999999999877654
No 277
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=92.85 E-value=0.83 Score=40.47 Aligned_cols=63 Identities=16% Similarity=0.018 Sum_probs=54.5
Q ss_pred hhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHhCCCCCHH
Q 017811 189 GNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVK 268 (365)
Q Consensus 189 G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~~~p~n~k 268 (365)
...+++.+...+|+......|+-.|.|.. +...+...+.-.|+|+.|..-++.+.+++|....
T Consensus 4 ~~~ll~~g~L~~al~~~~~~VR~~P~da~-----------------~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~ 66 (273)
T 1zbp_A 4 WKNALSEGQLQQALELLIEAIKASPKDAS-----------------LRSSFIELLCIDGDFERADEQLMQSIKLFPEYLP 66 (273)
T ss_dssp HHHHTTTTCHHHHHHHHHHHHHTCTTCHH-----------------HHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHH
T ss_pred HHHHHhCCCHHHHHHHHHHHHHhCCcCHH-----------------HHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhH
Confidence 35678999999999999999999999854 3666777788899999999999999999998765
No 278
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=91.95 E-value=0.28 Score=35.34 Aligned_cols=42 Identities=24% Similarity=0.248 Sum_probs=35.5
Q ss_pred CCHHH-HHHHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhcc
Q 017811 173 MTVEE-RIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGD 214 (365)
Q Consensus 173 ~~~~e-~~~~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~ 214 (365)
|+... .++.|..+..+|...-+.|+|.+|+.+|..||+.+-.
T Consensus 1 M~~~~~~~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~~ 43 (83)
T 2v6y_A 1 MSAQVMLEDMARKYAILAVKADKEGKVEDAITYYKKAIEVLSQ 43 (83)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 34444 6788889999999999999999999999999988743
No 279
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=90.89 E-value=2.9 Score=40.58 Aligned_cols=99 Identities=7% Similarity=-0.069 Sum_probs=76.9
Q ss_pred hhhhhhhhhhhhhHHHHHHHHHHHHHhh--ccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHhC
Q 017811 185 RKMDGNALFKEEKLEEAMQQYEMAIAYM--GDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGE 262 (365)
Q Consensus 185 ~k~~G~~~~~~~~y~~A~~~y~~al~~~--~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~~ 262 (365)
+...-+.+.+.|++++|...|.+....- |+ ...|..+-.+|.+.|++++|...+....+.
T Consensus 108 yn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd------------------~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~ 169 (501)
T 4g26_A 108 FTNGARLAVAKDDPEMAFDMVKQMKAFGIQPR------------------LRSYGPALFGFCRKGDADKAYEVDAHMVES 169 (501)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCC------------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCc------------------cceehHHHHHHHHCCCHHHHHHHHHHHHhc
Confidence 4445567889999999999998876542 22 123777888899999999999999987754
Q ss_pred C-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHh--hCCCcH
Q 017811 263 D-ENNVKALFRRGKARAELGQTDAAREDFLKAGK--FAPEDK 301 (365)
Q Consensus 263 ~-p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~--l~P~n~ 301 (365)
. ..+...|..+-.+|...|++++|...|++..+ ..|+..
T Consensus 170 G~~Pd~~ty~~Li~~~~~~g~~d~A~~ll~~Mr~~g~~ps~~ 211 (501)
T 4g26_A 170 EVVPEEPELAALLKVSMDTKNADKVYKTLQRLRDLVRQVSKS 211 (501)
T ss_dssp TCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSSBCHH
T ss_pred CCCCCHHHHHHHHHHHhhCCCHHHHHHHHHHHHHhCCCcCHH
Confidence 2 23778899999999999999999999998765 456543
No 280
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=90.86 E-value=3.1 Score=39.71 Aligned_cols=105 Identities=11% Similarity=-0.073 Sum_probs=76.5
Q ss_pred HHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHH
Q 017811 181 AADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVL 260 (365)
Q Consensus 181 ~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL 260 (365)
.+.-....+..++..|+|.+|.........-.-.... ...+..+++-....|+..++|.+|...++++.
T Consensus 136 rarl~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~-----------~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~ 204 (445)
T 4b4t_P 136 RARVTKDLVEIKKEEGKIDEAADILCELQVETYGSME-----------MSEKIQFILEQMELSILKGDYSQATVLSRKIL 204 (445)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSSSC-----------HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhccc-----------HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 4555667889999999999999998887543221110 12234557788889999999999999999864
Q ss_pred h---CCCCC--H--HHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 017811 261 G---EDENN--V--KALFRRGKARAELGQTDAAREDFLKAGKF 296 (365)
Q Consensus 261 ~---~~p~n--~--ka~~~~g~a~~~l~~~~~A~~~l~~al~l 296 (365)
. -.+.+ . ..+...|..+.+.++|.+|..+|..++..
T Consensus 205 ~~~~~~~~~~~lk~~~~~~~~~~~~~e~~y~~a~~~y~e~~~~ 247 (445)
T 4b4t_P 205 KKTFKNPKYESLKLEYYNLLVKISLHKREYLEVAQYLQEIYQT 247 (445)
T ss_dssp HHHHHSSCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HhhcccCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 2 22223 2 35567888999999999999999888753
No 281
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=90.26 E-value=1.7 Score=40.64 Aligned_cols=80 Identities=16% Similarity=0.047 Sum_probs=61.0
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHhCCCC--------C--------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q 017811 238 NMAACLLKLKRYEEAIGQCSLVLGEDEN--------N--------------VKALFRRGKARAELGQTDAAREDFLKAGK 295 (365)
Q Consensus 238 nla~~~~kl~~~~~A~~~~~~aL~~~p~--------n--------------~ka~~~~g~a~~~l~~~~~A~~~l~~al~ 295 (365)
..|......+++..|+..+..||.+... . ..++..++.++..+|++.+|+..+..++.
T Consensus 120 ~~~~~~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~~~l~~~~~ 199 (388)
T 2ff4_A 120 TAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAELEALTF 199 (388)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 3344444568999999999999977421 1 13666788899999999999999999999
Q ss_pred hCCCcHHHHHHHHHHHHHHHHH
Q 017811 296 FAPEDKSIARELRLLAEHEKAV 317 (365)
Q Consensus 296 l~P~n~~~~~~l~~l~~~~~~~ 317 (365)
.+|-+..++..+..+..+.+..
T Consensus 200 ~~P~~E~~~~~lm~al~~~Gr~ 221 (388)
T 2ff4_A 200 EHPYREPLWTQLITAYYLSDRQ 221 (388)
T ss_dssp HSTTCHHHHHHHHHHHHTTTCH
T ss_pred hCCCCHHHHHHHHHHHHHcCCH
Confidence 9999988888877765544333
No 282
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=89.92 E-value=0.74 Score=35.40 Aligned_cols=43 Identities=23% Similarity=0.227 Sum_probs=35.7
Q ss_pred CCCHH-HHHHHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhcc
Q 017811 172 DMTVE-ERIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGD 214 (365)
Q Consensus 172 ~~~~~-e~~~~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~ 214 (365)
.|+.. ..++.|..+..+|...-..++|.+|+.+|..|++++-.
T Consensus 7 ~m~~~~~~l~kAi~lv~~Ave~D~ag~y~eAl~lY~~Aie~l~~ 50 (117)
T 2cpt_A 7 GMSSTSPNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLH 50 (117)
T ss_dssp CSCCCCHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred cCCccHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 44444 56778889999999999999999999999999998643
No 283
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=89.89 E-value=5.9 Score=38.38 Aligned_cols=115 Identities=14% Similarity=0.065 Sum_probs=81.5
Q ss_pred hhhhHHHHHHHHHHHHHhh--ccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHhCC-CCCHHHH
Q 017811 194 KEEKLEEAMQQYEMAIAYM--GDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGED-ENNVKAL 270 (365)
Q Consensus 194 ~~~~y~~A~~~y~~al~~~--~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~~~-p~n~ka~ 270 (365)
+.+.+.+|...|.+....- |+ ...|..+-.+|.+.|++++|...++...... ..+...|
T Consensus 82 ~~~~l~~A~~lf~~M~~~G~~Pd------------------~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~ty 143 (501)
T 4g26_A 82 PNPGLSRGFDIFKQMIVDKVVPN------------------EATFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSY 143 (501)
T ss_dssp CCHHHHHHHHHHHHHHHTTCCCC------------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHH
T ss_pred hcchHHHHHHHHHHHHHhCCCCC------------------HHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCcccee
Confidence 4456777888777655432 22 2248888899999999999999999877642 2388899
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHh--hCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 017811 271 FRRGKARAELGQTDAAREDFLKAGK--FAPEDKSIARELRLLAEHEKAVYKKQKEIYKGI 328 (365)
Q Consensus 271 ~~~g~a~~~l~~~~~A~~~l~~al~--l~P~n~~~~~~l~~l~~~~~~~~~~~k~~y~km 328 (365)
..+-.+|...|++++|...|....+ +.|+.......+..+ .+.++.. +...++.+|
T Consensus 144 n~lI~~~~~~g~~~~A~~l~~~M~~~G~~Pd~~ty~~Li~~~-~~~g~~d-~A~~ll~~M 201 (501)
T 4g26_A 144 GPALFGFCRKGDADKAYEVDAHMVESEVVPEEPELAALLKVS-MDTKNAD-KVYKTLQRL 201 (501)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHH-HHTTCHH-HHHHHHHHH
T ss_pred hHHHHHHHHCCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHH-hhCCCHH-HHHHHHHHH
Confidence 9999999999999999999998876 456654444444433 3333333 344556666
No 284
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=88.51 E-value=5.3 Score=36.24 Aligned_cols=119 Identities=12% Similarity=-0.050 Sum_probs=70.6
Q ss_pred HhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcC-------HHHHHH--
Q 017811 184 RRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKR-------YEEAIG-- 254 (365)
Q Consensus 184 ~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~-------~~~A~~-- 254 (365)
.....|-.++..|+|.+|+..|+.+|...+-.... ..++.+++.++...|.-.+-.+-+.+.+ ....++
T Consensus 116 ~~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~--~~~e~~e~~eli~icrEYilal~iEl~Rr~l~~~~~kR~lELA 193 (325)
T 3mv2_A 116 EKMNEGYKNFKLNKPDIAIECFREAIYRITLLMVD--DAEDEKLAHKILETAREYILGLSIELERRSLKEGNTVRMLELA 193 (325)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCCBC--SSHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTCHHHHHHHH
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHhheeeec--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHH
Confidence 34568999999999999999999999887642111 1222333444444433322222223211 111111
Q ss_pred HHHHHHhCCCCCHH-HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHH
Q 017811 255 QCSLVLGEDENNVK-ALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIA 304 (365)
Q Consensus 255 ~~~~aL~~~p~n~k-a~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~ 304 (365)
.|=.-..+.|.+-- ++..--...++.++|.-|...-++.|++.|..+.+.
T Consensus 194 AYFT~c~LQp~H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~~~~a~ 244 (325)
T 3mv2_A 194 AYFTKAKLSPIHRTNALQVAMSQHFKHKNFLQASYFAGEFLKIISSGPRAE 244 (325)
T ss_dssp HHGGGSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSHHHH
T ss_pred HHhccCCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCHHHHH
Confidence 11122344554433 444444577889999999999999999999754443
No 285
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=88.21 E-value=0.61 Score=33.50 Aligned_cols=42 Identities=24% Similarity=0.245 Sum_probs=35.8
Q ss_pred CCH-HHHHHHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhcc
Q 017811 173 MTV-EERIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGD 214 (365)
Q Consensus 173 ~~~-~e~~~~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~ 214 (365)
|++ ...++.|..+..+|..+-+.|+|.+|+.+|..||+.+-.
T Consensus 9 ~~~~~~~~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~~ 51 (83)
T 2w2u_A 9 MSAQVMLEEMARKYAINAVKADKEGNAEEAITNYKKAIEVLAQ 51 (83)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred CCCchHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 444 356788999999999999999999999999999988743
No 286
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=87.27 E-value=0.75 Score=33.09 Aligned_cols=38 Identities=16% Similarity=0.091 Sum_probs=32.4
Q ss_pred HHHHHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhcc
Q 017811 177 ERIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGD 214 (365)
Q Consensus 177 e~~~~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~ 214 (365)
..++.|..+..+|...-..|+|.+|+.+|..|++++-.
T Consensus 8 ~~l~~A~~l~~~Av~~D~~g~y~eAl~~Y~~aie~l~~ 45 (85)
T 2v6x_A 8 DFLTKGIELVQKAIDLDTATQYEEAYTAYYNGLDYLML 45 (85)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 35667888888999999999999999999999997643
No 287
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=87.06 E-value=8.3 Score=34.91 Aligned_cols=115 Identities=12% Similarity=0.037 Sum_probs=70.8
Q ss_pred hhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhc--C-----HHHHHHHHH
Q 017811 185 RKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLK--R-----YEEAIGQCS 257 (365)
Q Consensus 185 ~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~--~-----~~~A~~~~~ 257 (365)
....|-.++..|+|.+|+..|+.+|...+-.... ..++.+++.++...|.-.+-.+-+.+. + .+.....++
T Consensus 105 ~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~--~~~e~~e~~eli~icreYilal~iEl~Rr~l~~~~~~~~kR~lE 182 (320)
T 3mkr_B 105 RLQLCYQLTTVGKFEEAVEKFRSILLSVPLLVVD--NKQEIAEAQQLITICREYIVGLSMETERKKLPKETLEQQKRICE 182 (320)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHGGGCCCC--SHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCSHHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHhhheeec--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCchhHHHHHH
Confidence 4578999999999999999999999988642211 122233444444444333332333331 1 122222222
Q ss_pred HH-----HhCCCCCHH-HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcH
Q 017811 258 LV-----LGEDENNVK-ALFRRGKARAELGQTDAAREDFLKAGKFAPEDK 301 (365)
Q Consensus 258 ~a-----L~~~p~n~k-a~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~ 301 (365)
.+ ..+.|.+-- ++..--...++.++|.-|...-++.|++.|+..
T Consensus 183 LAAYFT~c~Lqp~H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~~~ 232 (320)
T 3mkr_B 183 MAAYFTHSNLQPVHMILVLRTALNLFFKLKNFRTAAAFARRLLELGPKPE 232 (320)
T ss_dssp HHHHHTTSCCCHHHHHHHHHHHHHHHHHTTBHHHHHHHHHHHHHTCCCHH
T ss_pred HHHHhccCCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCHH
Confidence 22 345565543 444444577889999999999999999998743
No 288
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=86.30 E-value=3.9 Score=39.71 Aligned_cols=80 Identities=11% Similarity=-0.128 Sum_probs=67.5
Q ss_pred HHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHhC
Q 017811 183 DRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGE 262 (365)
Q Consensus 183 ~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~~ 262 (365)
..+...|...--...+..|...|.+|+.+.|.+. ..|+.||.+....+++-.|+-+|.++|..
T Consensus 153 r~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~G-----------------~~~nqLavla~~~~~~l~a~y~y~rsl~~ 215 (497)
T 1ya0_A 153 HCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNG-----------------QPYNQLAILASSKGDHLTTIFYYCRSIAV 215 (497)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBS-----------------HHHHHHHHHHHHTTCHHHHHHHHHHHHSS
T ss_pred HHHHHcccHHHHHHHHHHHHHHHHHHHHhCCCCC-----------------chHHHHHHHHhcccccHHHHHHHHHHHhc
Confidence 3556688887777889999999999999999863 34999999999999999999999999988
Q ss_pred CCCCHHHHHHHHHHHHH
Q 017811 263 DENNVKALFRRGKARAE 279 (365)
Q Consensus 263 ~p~n~ka~~~~g~a~~~ 279 (365)
....+.|.-++...+..
T Consensus 216 ~~Pf~~a~~nL~~~f~~ 232 (497)
T 1ya0_A 216 KFPFPAASTNLQKALSK 232 (497)
T ss_dssp SBCCHHHHHHHHHHHHH
T ss_pred CCCChhHHHHHHHHHHH
Confidence 77788887777777654
No 289
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=86.12 E-value=2.4 Score=31.06 Aligned_cols=37 Identities=19% Similarity=0.108 Sum_probs=32.4
Q ss_pred HHHHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhcc
Q 017811 178 RIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGD 214 (365)
Q Consensus 178 ~~~~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~ 214 (365)
.++.|..+..+|..+-+.++|.+|+.+|..|++++-.
T Consensus 11 ~l~~Ai~lv~~Ave~D~~g~y~eAl~~Y~~Aie~l~~ 47 (93)
T 1wfd_A 11 DSTAAVAVLKRAVELDAESRYQQALVCYQEGIDMLLQ 47 (93)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 5667888899999999999999999999999988743
No 290
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=85.45 E-value=1.3 Score=42.98 Aligned_cols=68 Identities=16% Similarity=0.017 Sum_probs=55.7
Q ss_pred chhhhHHHHHHHHhcCHHHHHHHHHHHHhCCC--CC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCc
Q 017811 233 NPCHLNMAACLLKLKRYEEAIGQCSLVLGEDE--NN---VKALFRRGKARAELGQTDAAREDFLKAGKFAPED 300 (365)
Q Consensus 233 ~~~~~nla~~~~kl~~~~~A~~~~~~aL~~~p--~n---~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n 300 (365)
..+++-+-..|+..+.|+.|.....++.--.. .| +..+|..|+++...++|.+|..+|..|+...|.+
T Consensus 231 a~l~nllLRnYL~~~~y~qA~~lvsk~~fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~~ 303 (523)
T 4b4t_S 231 AMLINLILRDFLNNGEVDSASDFISKLEYPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKAPHN 303 (523)
T ss_dssp HHHHHHHHHHHHHSSCSTTHHHHHHHHCSCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSCS
T ss_pred HHHHHHHHHHHHccCcHHHHHHHHhcCcCCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcc
Confidence 34566778899999999999999999853221 12 4567889999999999999999999999998865
No 291
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=85.17 E-value=2.4 Score=35.06 Aligned_cols=27 Identities=7% Similarity=-0.099 Sum_probs=22.0
Q ss_pred HHHhhhhhhhhhhhhhHHHHHHHHHHH
Q 017811 182 ADRRKMDGNALFKEEKLEEAMQQYEMA 208 (365)
Q Consensus 182 a~~~k~~G~~~~~~~~y~~A~~~y~~a 208 (365)
-..|+..|...+..|++.-|.++|.++
T Consensus 34 ~~~Wk~Lg~~AL~~gn~~lAe~cy~~~ 60 (177)
T 3mkq_B 34 SITWERLIQEALAQGNASLAEMIYQTQ 60 (177)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHh
Confidence 446888888888888888888888875
No 292
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=83.04 E-value=3.5 Score=31.35 Aligned_cols=78 Identities=15% Similarity=0.055 Sum_probs=56.9
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhh-----hhhhHHHHHHHhhchhhhHHHHHHHHhcCHH
Q 017811 176 EERIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQ-----LFGKYRDMALAVKNPCHLNMAACLLKLKRYE 250 (365)
Q Consensus 176 ~e~~~~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~ 250 (365)
......|-.+...|-..=..|+-+.|+.+|+++|..+....... -.++.++....+..+...||..+.-+++...
T Consensus 16 k~~h~~AF~~Is~AL~~DE~g~k~~Al~lYk~GI~eLe~Gl~I~~~~~~~~g~~we~Ar~lq~KM~~nL~~v~~RL~~Le 95 (116)
T 2dl1_A 16 REAYKKAFLFVNKGLNTDELGQKEEAKNYYKQGIGHLLRGISISSKESEHTGPGWESARQMQQKMKETLQNVRTRLEILE 95 (116)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSSCCCCTTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHHHHHhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566777777788777778888899999999888775422211 2356677788888888999999998887665
Q ss_pred HHH
Q 017811 251 EAI 253 (365)
Q Consensus 251 ~A~ 253 (365)
...
T Consensus 96 ~~~ 98 (116)
T 2dl1_A 96 KGL 98 (116)
T ss_dssp HHH
T ss_pred hcC
Confidence 543
No 293
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=83.01 E-value=2.4 Score=30.56 Aligned_cols=34 Identities=21% Similarity=0.143 Sum_probs=28.9
Q ss_pred HHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhc
Q 017811 180 GAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMG 213 (365)
Q Consensus 180 ~~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~ 213 (365)
..|..+..+|..+-..|+|.+|+.+|..||+++-
T Consensus 14 ~~A~~lv~~Ave~D~~g~y~eAl~lY~~Aie~ll 47 (86)
T 4a5x_A 14 TAAATVLKRAVELDSESRYPQALVCYQEGIDLLL 47 (86)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 4566777888888999999999999999998864
No 294
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=81.32 E-value=2 Score=31.20 Aligned_cols=37 Identities=22% Similarity=0.343 Sum_probs=32.5
Q ss_pred HHHHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhcc
Q 017811 178 RIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGD 214 (365)
Q Consensus 178 ~~~~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~ 214 (365)
-++.|..+-.++..+.+.|+|++||.+..+|..++..
T Consensus 11 pLn~AH~~~RrAe~ll~~gkydeAIech~kAa~yL~e 47 (97)
T 2crb_A 11 PLNLAHQQSRRADRLLAAGKYEEAISCHRKATTYLSE 47 (97)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhHhhhHHHHHHhcCCHHHHHHHHHHHHHHHHH
Confidence 4567888899999999999999999999999987654
No 295
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=81.19 E-value=4.5 Score=40.92 Aligned_cols=52 Identities=17% Similarity=0.101 Sum_probs=29.5
Q ss_pred hhHHHHHHHHhcCHHHHHHHHHHHH--------hCCCCCHHHHHHHHHHHHHcCCHHHHH
Q 017811 236 HLNMAACLLKLKRYEEAIGQCSLVL--------GEDENNVKALFRRGKARAELGQTDAAR 287 (365)
Q Consensus 236 ~~nla~~~~kl~~~~~A~~~~~~aL--------~~~p~n~ka~~~~g~a~~~l~~~~~A~ 287 (365)
+.++|..+++.++++.|+.+|.++= ..-..+.+.+-+++......|+++.|.
T Consensus 684 W~~la~~al~~~~~~~A~~~y~~~~d~~~l~~l~~~~~~~~~~~~~~~~a~~~~~~~~A~ 743 (814)
T 3mkq_A 684 WRALGDASLQRFNFKLAIEAFTNAHDLESLFLLHSSFNNKEGLVTLAKDAETTGKFNLAF 743 (814)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHccChhhhHHHHHHcCCHHHHHHHHHHHHHcCchHHHH
Confidence 6677777777777777777777641 112345555555544444444444443
No 296
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=79.40 E-value=12 Score=35.53 Aligned_cols=71 Identities=7% Similarity=-0.092 Sum_probs=52.0
Q ss_pred HHHHhhhhhhhhhhhhhHHHHHHHHHHHHH-hhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHH
Q 017811 181 AADRRKMDGNALFKEEKLEEAMQQYEMAIA-YMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLV 259 (365)
Q Consensus 181 ~a~~~k~~G~~~~~~~~y~~A~~~y~~al~-~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~a 259 (365)
.++.+..+...++..++|.+|...++++.. .+..... ..++...+.-.|..+...++|.+|..+|..+
T Consensus 176 kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~~~-----------~~lk~~~~~~~~~~~~~e~~y~~a~~~y~e~ 244 (445)
T 4b4t_P 176 KIQFILEQMELSILKGDYSQATVLSRKILKKTFKNPKY-----------ESLKLEYYNLLVKISLHKREYLEVAQYLQEI 244 (445)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSSCC-----------HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccCCc-----------HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 345566677788999999999999998743 2221100 1244556788899999999999999999998
Q ss_pred HhC
Q 017811 260 LGE 262 (365)
Q Consensus 260 L~~ 262 (365)
+..
T Consensus 245 ~~~ 247 (445)
T 4b4t_P 245 YQT 247 (445)
T ss_dssp HHH
T ss_pred Hhc
Confidence 753
No 297
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=78.90 E-value=7.9 Score=38.61 Aligned_cols=56 Identities=11% Similarity=-0.036 Sum_probs=46.9
Q ss_pred HHHHHHhcCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q 017811 240 AACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGK 295 (365)
Q Consensus 240 a~~~~kl~~~~~A~~~~~~aL~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~ 295 (365)
+...++.++|..|...+...-.......++.|++|+++..+|+-++|...|.++..
T Consensus 292 ~r~Alr~~d~~~a~~~~~~l~~~~~~~~r~~YW~~ra~~~~g~~~~a~~~~~~~a~ 347 (618)
T 1qsa_A 292 VRMALGTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLERGREAEAKEILHQLMQ 347 (618)
T ss_dssp HHHHHHHTCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHCCCHHHHHHHHHHccccccccHhHHHHHHHHHHHcCCHHHHHHHHHHHhc
Confidence 33445789999999999876554446789999999999999999999999998875
No 298
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=78.52 E-value=10 Score=38.16 Aligned_cols=48 Identities=21% Similarity=0.024 Sum_probs=40.3
Q ss_pred HHHHhcCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 017811 242 CLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAG 294 (365)
Q Consensus 242 ~~~kl~~~~~A~~~~~~aL~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al 294 (365)
..+.+|+++.|...++. -++...|-++|..+...++++.|...|.++-
T Consensus 661 ~~l~~~~~~~A~~~~~~-----~~~~~~W~~la~~al~~~~~~~A~~~y~~~~ 708 (814)
T 3mkq_A 661 LALKVGQLTLARDLLTD-----ESAEMKWRALGDASLQRFNFKLAIEAFTNAH 708 (814)
T ss_dssp HHHHHTCHHHHHHHHTT-----CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred hhhhcCCHHHHHHHHHh-----hCcHhHHHHHHHHHHHcCCHHHHHHHHHHcc
Confidence 44678999999887543 3578899999999999999999999999873
No 299
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=77.35 E-value=11 Score=31.09 Aligned_cols=48 Identities=13% Similarity=0.103 Sum_probs=41.5
Q ss_pred HHHhcCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q 017811 243 LLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGK 295 (365)
Q Consensus 243 ~~kl~~~~~A~~~~~~aL~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~ 295 (365)
-+.+|+++.|...++.. ++...|-++|.+.+..|+++-|..+|+++-.
T Consensus 15 AL~lg~l~~A~e~a~~l-----~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D 62 (177)
T 3mkq_B 15 ALEYGNLDAALDEAKKL-----NDSITWERLIQEALAQGNASLAEMIYQTQHS 62 (177)
T ss_dssp HHHTTCHHHHHHHHHHH-----CCHHHHHHHHHHHHHTTCHHHHHHHHHHTTC
T ss_pred HHhcCCHHHHHHHHHHh-----CCHHHHHHHHHHHHHcCChHHHHHHHHHhCC
Confidence 35789999999988765 6788999999999999999999999998743
No 300
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=77.09 E-value=15 Score=35.10 Aligned_cols=105 Identities=7% Similarity=-0.138 Sum_probs=70.2
Q ss_pred hhhhHHHHHHHHHHHHHhhccchhhhhhhh-HHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHh--------CCC
Q 017811 194 KEEKLEEAMQQYEMAIAYMGDDFMFQLFGK-YRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLG--------EDE 264 (365)
Q Consensus 194 ~~~~y~~A~~~y~~al~~~~~~~~~~~~~~-~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~--------~~p 264 (365)
+....+.|.+...++....-.+......+. ... +....-+.+++-.+|+++++..-|...++..-. ..|
T Consensus 138 ~~~~le~~a~~i~k~F~~cl~Dr~~~~~~s~p~k--k~~~l~l~n~L~kiYFkl~~~~lckni~k~i~~~~~~p~~~~~p 215 (455)
T 3t5v_B 138 SHQFLSHISSILSRLFNSIKPPRGNASSTNIPGK--QRILLYLVNKLNNIYFRIESPQLCSNIFKNFQPKSMLAHFNEYQ 215 (455)
T ss_dssp TTHHHHHHHHHHHHHHHHCCCC----CCSSCCHH--HHHHHHHHHHHHHHHHHSSCCTTHHHHHHTHHHHCCCSCGGGSC
T ss_pred chhHHHHHHHHHHHHHHHhcccCCCccccccccc--chhHHHHHHHHHHHHHHcCCHHHHHHHHHHhccCCCCcChhhCC
Confidence 456778888888888888654332111110 000 111122356677899999999888777764322 122
Q ss_pred C--CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh-CCCc
Q 017811 265 N--NVKALFRRGKARAELGQTDAAREDFLKAGKF-APED 300 (365)
Q Consensus 265 ~--n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l-~P~n 300 (365)
. -+..+|.+|+.++..++|.+|...|..|+.. .|.+
T Consensus 216 ~~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp~~ 254 (455)
T 3t5v_B 216 LDQQIEYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNLP 254 (455)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred ccceEeeeHHHHHHHHHHccHHHHHHHHHHHHHhcCCcc
Confidence 1 2468889999999999999999999999999 7765
No 301
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=76.45 E-value=5.9 Score=42.61 Aligned_cols=108 Identities=14% Similarity=0.184 Sum_probs=72.1
Q ss_pred hhhhhhhhhhhhHHHHHHHHHHHHHhhccch-hhhhhhhHHHHHH-----HhhchhhhHHHHHHHHhcCHHHHHHHHHHH
Q 017811 186 KMDGNALFKEEKLEEAMQQYEMAIAYMGDDF-MFQLFGKYRDMAL-----AVKNPCHLNMAACLLKLKRYEEAIGQCSLV 259 (365)
Q Consensus 186 k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~-~~~~~~~~~~~~~-----~~~~~~~~nla~~~~kl~~~~~A~~~~~~a 259 (365)
.-.|..++..|++++|..+|.+|..-...+. ............. .....-|+.+...+-+.+.++.++..+..|
T Consensus 846 yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LFe~~~~~~~vi~fa~lA 925 (1139)
T 4fhn_B 846 YLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLLA 925 (1139)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHHHHTSCCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 5588899999999999999999854332211 1100000000000 011123667777888889999999999999
Q ss_pred HhCCC-CCH--H--HHHHHHHHHHHcCCHHHHHHHHHHH
Q 017811 260 LGEDE-NNV--K--ALFRRGKARAELGQTDAAREDFLKA 293 (365)
Q Consensus 260 L~~~p-~n~--k--a~~~~g~a~~~l~~~~~A~~~l~~a 293 (365)
|+..+ +.. . -|.++=++++.+++|++|...+...
T Consensus 926 i~~~~~~~~~~~~~l~~~iFk~~L~l~~ye~Ay~aL~~~ 964 (1139)
T 4fhn_B 926 DASKETDDEDLSIAITHETLKTACAAGKFDAAHVALMVL 964 (1139)
T ss_dssp HHHCCSCCHHHHHHHHHHHHHHHHHHCCSGGGGHHHHHH
T ss_pred HHhccCCChhhHHHHHHHHHHHHHhhCCHHHHHHHHHhC
Confidence 97553 332 2 4677888999999999998887544
No 302
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=74.95 E-value=8.2 Score=36.17 Aligned_cols=145 Identities=16% Similarity=0.137 Sum_probs=89.5
Q ss_pred HHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccch---hhh--------------hhhhHHHH------------HHHhhc
Q 017811 183 DRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDF---MFQ--------------LFGKYRDM------------ALAVKN 233 (365)
Q Consensus 183 ~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~---~~~--------------~~~~~~~~------------~~~~~~ 233 (365)
......|..|.+.|++++-..+........+.-. ... ..+..-+. ..-++.
T Consensus 20 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~kak~~k~v~~l~~~~~~~~~~~~~~~~~~~~~~~~a~~~~r~flr~ 99 (394)
T 3txn_A 20 QGILQQGELYKQEGKAKELADLIKVTRPFLSSISKAKAAKLVRSLVDMFLDMDAGTGIEVQLCKDCIEWAKQEKRTFLRQ 99 (394)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHTTTGGGGSCHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566788888888888877776665443332100 000 00000000 011223
Q ss_pred hhhhHHHHHHHHhcCHHHHHHHHHHHHhC----CCC--CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC---CCcHHHH
Q 017811 234 PCHLNMAACLLKLKRYEEAIGQCSLVLGE----DEN--NVKALFRRGKARAELGQTDAAREDFLKAGKFA---PEDKSIA 304 (365)
Q Consensus 234 ~~~~nla~~~~kl~~~~~A~~~~~~aL~~----~p~--n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~---P~n~~~~ 304 (365)
.+-.+||..|+..|+|.+|+..+.+.+.. |.. -...+....++|..++++..+...|.+|.... +-++.+.
T Consensus 100 ~l~~kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~~~p~i~ 179 (394)
T 3txn_A 100 SLEARLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPKVQ 179 (394)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHH
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCCCCHHHH
Confidence 34558999999999999999988887752 321 24578888999999999999999999987653 2334444
Q ss_pred HHHHHH----HH-HHHHHHHHHHHHHhc
Q 017811 305 RELRLL----AE-HEKAVYKKQKEIYKG 327 (365)
Q Consensus 305 ~~l~~l----~~-~~~~~~~~~k~~y~k 327 (365)
..+..+ +. ..+++..+....|.-
T Consensus 180 a~i~~~~Gi~~l~~~rdyk~A~~~F~ea 207 (394)
T 3txn_A 180 GALDLQSGILHAADERDFKTAFSYFYEA 207 (394)
T ss_dssp HHHHHHHHHHHHHTTSCHHHHHHHHHHH
T ss_pred HHHHHHhhHHHHHhccCHHHHHHHHHHH
Confidence 444333 33 345556666665543
No 303
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=72.52 E-value=10 Score=30.43 Aligned_cols=72 Identities=13% Similarity=0.067 Sum_probs=54.7
Q ss_pred hhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHhCCCCCHHHHHH
Q 017811 193 FKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFR 272 (365)
Q Consensus 193 ~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~~~p~n~ka~~~ 272 (365)
...++.++|...|+.|+.+ +..| ++++...|.--.+.|+...|...+.+++.+.|.. +-++.
T Consensus 71 ~ei~D~d~aR~vy~~a~~~---hKkF--------------AKiwi~~AqFEiRqgnl~kARkILg~AiG~~~k~-~~~le 132 (161)
T 4h7y_A 71 KAIQEPDDARDYFQMARAN---CKKF--------------AFVHISFAQFELSQGNVKKSKQLLQKAVERGAVP-LEMLE 132 (161)
T ss_dssp HHHHCGGGCHHHHHHHHHH---CTTB--------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBC-HHHHH
T ss_pred HHhcCHHHHHHHHHHHHHH---hHHH--------------HHHHHHHHHHHHHcccHHHHHHHHHHHhccCCCc-HHHHH
Confidence 3447889999999999987 2222 5568888999999999999999999999999854 44555
Q ss_pred HHHHHHHcCC
Q 017811 273 RGKARAELGQ 282 (365)
Q Consensus 273 ~g~a~~~l~~ 282 (365)
.|..-+..|.
T Consensus 133 ~a~~nl~~~~ 142 (161)
T 4h7y_A 133 IALRNLNLQK 142 (161)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHhhhcCC
Confidence 5555555544
No 304
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=71.70 E-value=41 Score=27.68 Aligned_cols=53 Identities=11% Similarity=0.031 Sum_probs=44.2
Q ss_pred hHHHHHHHHhcCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 017811 237 LNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAG 294 (365)
Q Consensus 237 ~nla~~~~kl~~~~~A~~~~~~aL~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al 294 (365)
+-++..++-.|+|..|+-... .-+.+.+.|..+.||..+++|..|+..+.+.+
T Consensus 37 lL~~I~LyyngEY~R~Lf~L~-----~lNT~Ts~YYk~LCy~klKdYkkA~~~le~il 89 (242)
T 3kae_A 37 MLMSIVLYLNGEYTRALFHLH-----KLNTCTSKYYESLCYKKKKDYKKAIKSLESIL 89 (242)
T ss_dssp HHHHHHHHHTTCHHHHHHHHH-----TCCBHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hhhhhhhhhcchHhHHHHHHH-----hcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456777788999999876533 23568899999999999999999999999999
No 305
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=70.24 E-value=20 Score=28.41 Aligned_cols=40 Identities=20% Similarity=0.195 Sum_probs=32.9
Q ss_pred HHHHhCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 017811 257 SLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKF 296 (365)
Q Consensus 257 ~~aL~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l 296 (365)
...+.-.+-++..++.+|.||..+|+..+|...+++|.+.
T Consensus 115 ~~~l~n~~~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~k 154 (172)
T 1wy6_A 115 REILKNNEVSASILVAIANALRRVGDERDATTLLIEACKK 154 (172)
T ss_dssp HHHC--CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHhccCCCChHHHHHHHHHHHHhcchhhHHHHHHHHHHh
Confidence 3334556668999999999999999999999999999875
No 306
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=70.09 E-value=7.2 Score=28.28 Aligned_cols=26 Identities=23% Similarity=0.114 Sum_probs=16.8
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHH
Q 017811 269 ALFRRGKARAELGQTDAAREDFLKAG 294 (365)
Q Consensus 269 a~~~~g~a~~~l~~~~~A~~~l~~al 294 (365)
.+-|++.++...|+|++|+++.++|.
T Consensus 17 ~~~RrAe~ll~~gkydeAIech~kAa 42 (97)
T 2crb_A 17 QQSRRADRLLAAGKYEEAISCHRKAT 42 (97)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HhhhHHHHHHhcCCHHHHHHHHHHHH
Confidence 44567777777777777766555444
No 307
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=69.62 E-value=7.7 Score=36.71 Aligned_cols=91 Identities=7% Similarity=0.031 Sum_probs=66.3
Q ss_pred chhhhHHHHHHHHhcCHHHHHHHHHHHHhCC---CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC--CCcHHHHHHH
Q 017811 233 NPCHLNMAACLLKLKRYEEAIGQCSLVLGED---ENNVKALFRRGKARAELGQTDAAREDFLKAGKFA--PEDKSIAREL 307 (365)
Q Consensus 233 ~~~~~nla~~~~kl~~~~~A~~~~~~aL~~~---p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~--P~n~~~~~~l 307 (365)
..++..+|..|++.|++..|+..+.++.... ..-...++...+++...++|..+...+.++..+- ..+...+..+
T Consensus 131 ~~~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~~d~~~~~~l 210 (429)
T 4b4t_R 131 AQAWINLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDWERRNRY 210 (429)
T ss_dssp SSCCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCCTHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcCCCHHHHHHH
Confidence 3478899999999999999999999987543 2346788999999999999999999999997663 2344444444
Q ss_pred HHHHH----HHHHHHHHHHH
Q 017811 308 RLLAE----HEKAVYKKQKE 323 (365)
Q Consensus 308 ~~l~~----~~~~~~~~~k~ 323 (365)
..+.- ..+++..+.+.
T Consensus 211 k~~~gl~~l~~r~f~~Aa~~ 230 (429)
T 4b4t_R 211 KTYYGIHCLAVRNFKEAAKL 230 (429)
T ss_dssp HHHHHHGGGGTSCHHHHHHH
T ss_pred HHHHHHHHHHhChHHHHHHH
Confidence 33322 23445555444
No 308
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=69.36 E-value=67 Score=29.20 Aligned_cols=116 Identities=16% Similarity=0.153 Sum_probs=61.6
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhHHHHHHH-HHHHHHhhccchhh---hhh----hhHHHHHHHhhchhhhHHHHHHHHhc
Q 017811 176 EERIGAADRRKMDGNALFKEEKLEEAMQQ-YEMAIAYMGDDFMF---QLF----GKYRDMALAVKNPCHLNMAACLLKLK 247 (365)
Q Consensus 176 ~e~~~~a~~~k~~G~~~~~~~~y~~A~~~-y~~al~~~~~~~~~---~~~----~~~~~~~~~~~~~~~~nla~~~~kl~ 247 (365)
++..+.-..++...+.|.++++|.+|+.. |.-|+.++...... ++. +...+.-...-.....++..++....
T Consensus 29 ~~~YEAHQ~~RTi~~Ry~~~k~y~eAidLL~~GA~~ll~~~Q~~sg~DL~~llvevy~~~~~~~~~~~~~rL~~L~~~~~ 108 (336)
T 3lpz_A 29 EEQYEAAQETRLVAARYSKQGNWAAAVDILASVSQTLLRSGQGGSGGDLAVLLVDTFRQAGQRVDGASRGKLLGCLRLFQ 108 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHTTSC
T ss_pred ccccHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhCC
Confidence 34466666788888999999999999986 55555555431110 000 00000000000011222333332222
Q ss_pred C--------HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Q 017811 248 R--------YEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFL 291 (365)
Q Consensus 248 ~--------~~~A~~~~~~aL~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~ 291 (365)
. ..+|+.+..+.=...-.++.-+..+|..|..-++|.+|...|-
T Consensus 109 ~~~p~r~~fi~~ai~WS~~~g~~~~Gdp~LH~~ig~~~~~e~~~~~Ae~H~i 160 (336)
T 3lpz_A 109 PGEPVRKRFVKEMIDWSKKFGDYPAGDPELHHVVGTLYVEEGEFEAAEKHLV 160 (336)
T ss_dssp TTCHHHHHHHHHHHHHHHHHSSCTTCCHHHHHHHHHHHHHTTCHHHHHHHHT
T ss_pred CCCcHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHccCCHHHHHHHHH
Confidence 1 2234444443222334677888888999998888888877763
No 309
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=68.26 E-value=20 Score=25.75 Aligned_cols=35 Identities=23% Similarity=0.336 Sum_probs=31.1
Q ss_pred HHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhcc
Q 017811 180 GAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGD 214 (365)
Q Consensus 180 ~~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~ 214 (365)
+.++.+...|..+|+.++|.+|+..++++.....+
T Consensus 51 ~~~r~~i~eak~~y~~~ny~ea~~l~~k~~n~ten 85 (106)
T 2vkj_A 51 KKARSLIAEGKDLFETANYGEALVFFEKALNLSDN 85 (106)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC
T ss_pred hHHHHHHHHHHHHHHhcchhHHHHHHHHHHccccC
Confidence 67888889999999999999999999999876554
No 310
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=67.23 E-value=50 Score=35.06 Aligned_cols=97 Identities=6% Similarity=-0.103 Sum_probs=76.0
Q ss_pred HhhhhhhhhhhhhhHHHHHHHHHHHHHh-----hccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHH
Q 017811 184 RRKMDGNALFKEEKLEEAMQQYEMAIAY-----MGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSL 258 (365)
Q Consensus 184 ~~k~~G~~~~~~~~y~~A~~~y~~al~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~ 258 (365)
.+...-+.|.+.|+.++|...+...-+. .|+ ...|+-|-..|.+.|++++|...+++
T Consensus 129 TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~Pd------------------vvTYNtLI~Glck~G~~~eA~~Lf~e 190 (1134)
T 3spa_A 129 RLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLT------------------LDMYNAVMLGWARQGAFKELVYVLFM 190 (1134)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCC------------------HHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCC------------------HhHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 4566677899999999999999765432 333 22488888899999999999999998
Q ss_pred HHh--CCCCCHHHHHHHHHHHHHcCCH-HHHHHHHHHHHhh--CCC
Q 017811 259 VLG--EDENNVKALFRRGKARAELGQT-DAAREDFLKAGKF--APE 299 (365)
Q Consensus 259 aL~--~~p~n~ka~~~~g~a~~~l~~~-~~A~~~l~~al~l--~P~ 299 (365)
..+ +.| |+-.|.-+-.++...|+. ++|...|+..... .|+
T Consensus 191 M~~~G~~P-DvvTYntLI~glcK~G~~~e~A~~Ll~EM~~kG~~PD 235 (1134)
T 3spa_A 191 VKDAGLTP-DLLSYAAALQCMGRQDQDAGTIERCLEQMSQEGLKLQ 235 (1134)
T ss_dssp HHHTTCCC-CHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHTCCSH
T ss_pred HHHcCCCC-cHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCCCC
Confidence 765 345 888899999999999985 7888888877763 454
No 311
>3lvg_A Clathrin heavy chain 1; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} PDB: 3lvh_A
Probab=61.93 E-value=0.057 Score=52.13 Aligned_cols=131 Identities=15% Similarity=0.139 Sum_probs=90.2
Q ss_pred hhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHhCCC
Q 017811 185 RKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGEDE 264 (365)
Q Consensus 185 ~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~~~p 264 (365)
....|..+|..|.|+.|.-+|... + + |..||.|+.++++|..|++..++|-
T Consensus 147 iq~VGDrcf~e~lYeAAKilys~i----s-N--------------------~akLAstLV~L~~yq~AVdaArKAn---- 197 (624)
T 3lvg_A 147 IQQVGDRCYDEKMYDAAKLLYNNV----S-N--------------------FGRLASTLVHLGEYQAAVDGARKAN---- 197 (624)
T ss_dssp THHHHHHHHHSCCSTTSSTTGGGS----C-C--------------------CTTTSSSSSSCSGGGSSTTTTTTCC----
T ss_pred HHHHHHHHHHccCHHHHHHHHHhC----c-c--------------------HHHHHHHHHHHHHHHHHHHHHHhcC----
Confidence 456889999999999988877531 1 1 7789999999999999988777653
Q ss_pred CCHHHHHHHHH------------------------------HHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHH
Q 017811 265 NNVKALFRRGK------------------------------ARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHE 314 (365)
Q Consensus 265 ~n~ka~~~~g~------------------------------a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~~ 314 (365)
|++.|-.... -|...|.|++-+..++.++.++--+-.+-.+|+.+..+-
T Consensus 198 -s~ktWKeV~~ACvd~~EfrLAqicGLniIvhadeL~elv~~YE~~G~f~ELIsLlEaglglErAHmGmFTELaILYsKY 276 (624)
T 3lvg_A 198 -STRTWKEVCFACVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYSKF 276 (624)
T ss_dssp -SSCSHHHHTHHHHHSCTTTTTTHHHHHHHCCSSCCSGGGSSSSTTCCCTTSTTTHHHHTTSTTCCHHHHHHHHHHHHSS
T ss_pred -ChhHHHHHHHHHhCchHHHHHHHhcchhcccHHHHHHHHHHHHhCCCHHHHHHHHHHHhCCCchhHHHHHHHHHHHHhc
Confidence 2222222222 234456678889999999999888899999999887654
Q ss_pred HHHHHHHHHHHhcccCCCCCccc--------cchhHHHHHHHH
Q 017811 315 KAVYKKQKEIYKGIFGPRPEPKQ--------KKNWLIIFWQLL 349 (365)
Q Consensus 315 ~~~~~~~k~~y~kmf~~~~~~~~--------~~~~~~~~~~~~ 349 (365)
+-. +... +-++|...- +.+ ...|.-+.+.|.
T Consensus 277 ~Pe--KlmE-Hlklf~sri-NipKviracE~ahLW~ElvfLY~ 315 (624)
T 3lvg_A 277 KPQ--KMRE-HLELFWSRV-NIPKVLRAAEQAHLWAELVFLYD 315 (624)
T ss_dssp CTT--HHHH-HHTTSSSSS-CCTTTHHHHTTTTCHHHHHHHHH
T ss_pred CHH--HHHH-HHHHHHHhc-cHHHHHHHHHHHhhHHHHHHHHh
Confidence 322 2222 556666533 333 377777777665
No 312
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=61.30 E-value=34 Score=32.78 Aligned_cols=33 Identities=18% Similarity=0.215 Sum_probs=13.5
Q ss_pred HHHHHHHHHHHH-hCCCCCHHHHHHHHHHHHHcC
Q 017811 249 YEEAIGQCSLVL-GEDENNVKALFRRGKARAELG 281 (365)
Q Consensus 249 ~~~A~~~~~~aL-~~~p~n~ka~~~~g~a~~~l~ 281 (365)
|++|+.+++++- .-+++.++-++..+.-|...|
T Consensus 455 Y~~Ai~~L~k~~~tdd~~~v~~~~~~ak~yE~aG 488 (526)
T 2wb7_A 455 YKAAINDLQKAAQQDDYQMFLNYLNAAKKHEMAG 488 (526)
T ss_dssp HHHHHHHHHHHTTCCSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhccCCHHHHHHHHHHhhhhhhcc
Confidence 444444444444 223333344444444333333
No 313
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=59.65 E-value=14 Score=30.95 Aligned_cols=53 Identities=9% Similarity=0.027 Sum_probs=36.9
Q ss_pred chhhhHHHHHHHHhcCHHHHHHHHHHHHhCCCCCHHH-----HHHHHHHHHHcCCHHH
Q 017811 233 NPCHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKA-----LFRRGKARAELGQTDA 285 (365)
Q Consensus 233 ~~~~~nla~~~~kl~~~~~A~~~~~~aL~~~p~n~ka-----~~~~g~a~~~l~~~~~ 285 (365)
+.-++.+|.+++-.++|.+|..++..|+...|..... +-.+--+-+-+|++..
T Consensus 14 v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~~~~~k~~IL~yLIp~~Ll~G~iP~ 71 (203)
T 3t5x_A 14 VTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSSQKNKRMILIYLLPVKMLLGHMPT 71 (203)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTTCEEC
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 4457788888888899999999999998887765432 2233334456677654
No 314
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=59.18 E-value=67 Score=34.09 Aligned_cols=94 Identities=12% Similarity=0.002 Sum_probs=66.0
Q ss_pred hhhHHHHHHHHhcCHHHHHHHHHHHHhC----CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHh--hCCCcHHHHHHHH
Q 017811 235 CHLNMAACLLKLKRYEEAIGQCSLVLGE----DENNVKALFRRGKARAELGQTDAAREDFLKAGK--FAPEDKSIARELR 308 (365)
Q Consensus 235 ~~~nla~~~~kl~~~~~A~~~~~~aL~~----~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~--l~P~n~~~~~~l~ 308 (365)
.|+-+-.+|.+.|+.++|...+...-+. -.-|+-.|.-+-..|...|++++|...|..... +.|+-......+.
T Consensus 129 TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~PdvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~PDvvTYntLI~ 208 (1134)
T 3spa_A 129 RLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTPDLLSYAAALQ 208 (1134)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHH
Confidence 3777888999999999999998664322 234889999999999999999999999998876 4676544444443
Q ss_pred HHHHHHHHHHHHHHHHHhccc
Q 017811 309 LLAEHEKAVYKKQKEIYKGIF 329 (365)
Q Consensus 309 ~l~~~~~~~~~~~k~~y~kmf 329 (365)
+..+.+...+....++..|.
T Consensus 209 -glcK~G~~~e~A~~Ll~EM~ 228 (1134)
T 3spa_A 209 -CMGRQDQDAGTIERCLEQMS 228 (1134)
T ss_dssp -HHHHHTCCHHHHHHHHHHHH
T ss_pred -HHHhCCCcHHHHHHHHHHHH
Confidence 22222222233345566663
No 315
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=59.13 E-value=18 Score=25.00 Aligned_cols=36 Identities=19% Similarity=0.176 Sum_probs=30.4
Q ss_pred HHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccc
Q 017811 180 GAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDD 215 (365)
Q Consensus 180 ~~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~ 215 (365)
..-......|..+...|++++|+.++-+||...+..
T Consensus 15 ~~Fl~eV~~GE~L~~~g~~~~~~~hf~nAl~Vc~qP 50 (73)
T 3ax2_A 15 KFFLEEIQLGEELLAQGDYEKGVDHLTNAIAVCGQP 50 (73)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSSC
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHcCCH
Confidence 334455678999999999999999999999999874
No 316
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=57.48 E-value=30 Score=23.90 Aligned_cols=29 Identities=10% Similarity=0.124 Sum_probs=16.8
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHhhCCCcH
Q 017811 273 RGKARAELGQTDAAREDFLKAGKFAPEDK 301 (365)
Q Consensus 273 ~g~a~~~l~~~~~A~~~l~~al~l~P~n~ 301 (365)
+|..+...|++++|...|-+|+...|+=.
T Consensus 23 ~GE~L~~~g~~~~~~~hf~nAl~Vc~qP~ 51 (73)
T 3ax2_A 23 LGEELLAQGDYEKGVDHLTNAIAVCGQPQ 51 (73)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHTCSSCH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHcCCHH
Confidence 55555556666666666666666655533
No 317
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=56.89 E-value=29 Score=25.31 Aligned_cols=42 Identities=19% Similarity=0.150 Sum_probs=34.9
Q ss_pred CHHHHHHHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccc
Q 017811 174 TVEERIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDD 215 (365)
Q Consensus 174 ~~~e~~~~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~ 215 (365)
+.+++-..-......|..++..|+++.|+.+|-+||...+..
T Consensus 12 d~e~~e~~Fl~eV~lGE~L~~~g~~e~av~Hf~nAl~Vc~qP 53 (95)
T 1om2_A 12 DAEAVQKFFLEEIQLGEELLAQGDYEKGVDHLTNAIAVCGQP 53 (95)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHSCH
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHcCCH
Confidence 455555566667789999999999999999999999999874
No 318
>3eab_A Spastin; spastin, MIT, ESCRT, alternative splicing, ATP- binding, cytoplasm, disease mutation, hereditary spastic paraplegia, nucleotide-binding; 2.50A {Homo sapiens}
Probab=52.38 E-value=23 Score=25.53 Aligned_cols=70 Identities=13% Similarity=0.021 Sum_probs=43.5
Q ss_pred HHHHHHHhhhhhhhhhhh---hhHHHHHHHHHHHHHhhccchhhh--hhhhHHHHHHHhhchhhhHHHHHHHHhc
Q 017811 178 RIGAADRRKMDGNALFKE---EKLEEAMQQYEMAIAYMGDDFMFQ--LFGKYRDMALAVKNPCHLNMAACLLKLK 247 (365)
Q Consensus 178 ~~~~a~~~k~~G~~~~~~---~~y~~A~~~y~~al~~~~~~~~~~--~~~~~~~~~~~~~~~~~~nla~~~~kl~ 247 (365)
..+.|-.+...|-..=.. |+-++|+..|+++|..+......+ -.++..+....+..+...||..+.-++.
T Consensus 12 ~h~~AF~~Is~aL~~DE~~~~G~k~~A~~~YkkGi~eL~~Gi~V~~~g~G~~we~Ar~LQ~KM~~nL~~v~~RL~ 86 (89)
T 3eab_A 12 FHKQAFEYISIALRIDEDEKAGQKEQAVEWYKKGIEELEKGIAVIVTGQGEQCERARRLQAKMMTNLVMAKDRLQ 86 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHSCSSSGGGSHHHHHHHHHHHHHHHHSCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHhhcCCccCCCChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445566666666666666 777778888888777664322211 1345566667777777777777665543
No 319
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=51.27 E-value=40 Score=33.76 Aligned_cols=51 Identities=12% Similarity=0.014 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHH
Q 017811 267 VKALFRRGKARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAEHEKAV 317 (365)
Q Consensus 267 ~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~~~~~~ 317 (365)
..+...+|+..+..|+|.-|...+..++..+|+|.+++..+..+.+.+..+
T Consensus 449 ~~~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l~~~ 499 (658)
T 2cfu_A 449 AERLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLGYQ 499 (658)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHh
Confidence 457888999999999999999999999999999999999998887766553
No 320
>2ymb_A MITD1, MIT domain-containing protein 1; protein transport, membrane, PLD; 3.40A {Homo sapiens}
Probab=50.36 E-value=3.3 Score=36.28 Aligned_cols=39 Identities=18% Similarity=0.149 Sum_probs=0.0
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhcc
Q 017811 176 EERIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGD 214 (365)
Q Consensus 176 ~e~~~~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~ 214 (365)
+.....|..+..+|..+=+.|+|.+|+.+|..|++++-.
T Consensus 17 dp~~~~Ai~lv~~AVe~D~~g~y~eAl~lY~eaIe~Ll~ 55 (257)
T 2ymb_A 17 DPQSTAAATVLKRAVELDSESRYPQALVCYQEGIDLLLQ 55 (257)
T ss_dssp ---------------------------------------
T ss_pred ChhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 345667888888999999999999999999999988854
No 321
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=49.60 E-value=64 Score=31.27 Aligned_cols=105 Identities=12% Similarity=-0.057 Sum_probs=66.0
Q ss_pred HHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHH
Q 017811 180 GAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLV 259 (365)
Q Consensus 180 ~~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~a 259 (365)
+.+.-+.-.|..+.-+++|.+|..++..|+...|.+... ...+..++-.+-.|.+-+|+... +.
T Consensus 268 q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~~~~a----------~gfr~~a~K~lI~V~LLlG~iP~------r~ 331 (523)
T 4b4t_S 268 LEARYFFYLSKINAIQLDYSTANEYIIAAIRKAPHNSKS----------LGFLQQSNKLHCCIQLLMGDIPE------LS 331 (523)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSCSSSC----------SHHHHHHHHHHHHHHHHHTCCCC------HH
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcchhh----------hhHHHHHHHHHHhHHhhcCCCCC------hH
Confidence 346667778999999999999999999999988764321 01122334444455555676543 11
Q ss_pred HhCCCCC---HHHHHHHHHHHHHcCC---HHHHHHHHHHHHhhCCCcH
Q 017811 260 LGEDENN---VKALFRRGKARAELGQ---TDAAREDFLKAGKFAPEDK 301 (365)
Q Consensus 260 L~~~p~n---~ka~~~~g~a~~~l~~---~~~A~~~l~~al~l~P~n~ 301 (365)
+-..|.. -..|+.+++|+. .|+ |+.++..++..+..+-...
T Consensus 332 lf~q~~l~~~L~pY~~Lv~Avr-~GdL~~F~~~L~~h~~~F~~Dgty~ 378 (523)
T 4b4t_S 332 FFHQSNMQKSLLPYYHLTKAVK-LGDLKKFTSTITKYKQLLLKDDTYQ 378 (523)
T ss_dssp HHTTTSCHHHHHHHHHHHHHHH-HTCHHHHHHHHHHTHHHHHHTTCTH
T ss_pred HhhchhHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHhcceeccCChhH
Confidence 2123333 345778888864 355 5667777777777765443
No 322
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=48.89 E-value=23 Score=26.81 Aligned_cols=43 Identities=16% Similarity=0.151 Sum_probs=28.0
Q ss_pred CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC
Q 017811 248 RYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFAP 298 (365)
Q Consensus 248 ~~~~A~~~~~~aL~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P 298 (365)
.|++|..+.+++|.+|-. |.-..++.-|.+.+..|.+++.+..
T Consensus 18 ~h~~AF~~Is~AL~~DE~--------g~k~~Al~lYk~GI~eLe~Gl~I~~ 60 (116)
T 2dl1_A 18 AYKKAFLFVNKGLNTDEL--------GQKEEAKNYYKQGIGHLLRGISISS 60 (116)
T ss_dssp HHHHHHHHHHHHHHHHHH--------TCHHHHHHHHHHHHHHHHHHHSSCC
T ss_pred HHHHHHHHHHHHhhhhhc--------CCHHHHHHHHHHHHHHHHHhccccc
Confidence 366777888888877752 4444455556666667777777765
No 323
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=47.78 E-value=18 Score=37.47 Aligned_cols=62 Identities=15% Similarity=0.125 Sum_probs=46.1
Q ss_pred CCCCCEEEEEEEEEEcCCCee--eccC-------------------------cCCCCcceeecCCCCchhhhHHHHHhcC
Q 017811 67 PSKYSTCFLHYRAWAESTRHK--FDDT-------------------------WLEQQPLEMVLGKEKKEMTGLAIGVSSM 119 (365)
Q Consensus 67 p~~g~~v~v~y~~~~~~~g~~--fd~s-------------------------~~~~~p~~f~lg~~~~~i~g~e~~l~~M 119 (365)
...|+.|-|.|+..+..+|.. .+.+ ......+.|.+|.| .+.+-++..+..|
T Consensus 561 i~~gs~~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ies~~e~~fe~g~g-~~~~~le~vV~qm 639 (950)
T 3htx_A 561 ITNGSVVSICYSLSLAVDPEYSSDGESPREDNESNEEMESEYSANCESSVEPIESNEEIEFEVGTG-SMNPHIESEVTQM 639 (950)
T ss_dssp CCTTEEEEEEEEEEEEECC----------------------------CCCEEEEEEEEEEEEETTT-CBCHHHHHHHTTC
T ss_pred cCCCcEEEEEEEEEEEecCcccccccccccccccccccccccccchhhhhhcccccHHHHHHHhcC-Cccchhhheeeec
Confidence 478999999999988654421 1111 01134578999999 8999999999999
Q ss_pred CcCcEEEEEe
Q 017811 120 KAGEHALLHV 129 (365)
Q Consensus 120 k~GE~~~~~i 129 (365)
..|+...|..
T Consensus 640 s~gqT~~F~~ 649 (950)
T 3htx_A 640 TVGEYASFKM 649 (950)
T ss_dssp CTTCEEEEEE
T ss_pred cccceeEEec
Confidence 9999999984
No 324
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=47.64 E-value=53 Score=34.42 Aligned_cols=82 Identities=11% Similarity=0.191 Sum_probs=47.9
Q ss_pred hhhhhhhhhhhhHHHHHHHHHHHHHhhccch-hhhhhhhHHHHHH-----HhhchhhhHHHHHHHHhcCHHHHHHHHHHH
Q 017811 186 KMDGNALFKEEKLEEAMQQYEMAIAYMGDDF-MFQLFGKYRDMAL-----AVKNPCHLNMAACLLKLKRYEEAIGQCSLV 259 (365)
Q Consensus 186 k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~-~~~~~~~~~~~~~-----~~~~~~~~nla~~~~kl~~~~~A~~~~~~a 259 (365)
.-+|..++..|++++|..+|++|-.-...+. ...........+. .+...-|+..+..+-+.+-|+.++..++.|
T Consensus 844 yv~gr~~L~~ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll~~~e~~~~~~~YY~hV~~LFE~~~a~~~vi~fA~lA 923 (950)
T 4gq2_M 844 YLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLLA 923 (950)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHHHHTTTCSHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHhhhcccCcccccchhhhhhccCcccccchhHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 5689999999999999999999864432211 1000000000000 011123566677777777777777777777
Q ss_pred Hh-CCCCCH
Q 017811 260 LG-EDENNV 267 (365)
Q Consensus 260 L~-~~p~n~ 267 (365)
|. ..+++.
T Consensus 924 I~~~~~dd~ 932 (950)
T 4gq2_M 924 DASKETDDE 932 (950)
T ss_dssp HHTCCSCCH
T ss_pred HhhcccCCc
Confidence 75 334443
No 325
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=47.31 E-value=28 Score=36.56 Aligned_cols=53 Identities=13% Similarity=0.145 Sum_probs=40.9
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q 017811 239 MAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAGK 295 (365)
Q Consensus 239 la~~~~kl~~~~~A~~~~~~aL~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~ 295 (365)
+...++..+.++-| ...+..-|.++-.-|-+|++|+.+|++++|...|++|-.
T Consensus 816 l~~~L~~~~~~~~a----~eL~~~~~~t~~~~yv~gr~~L~~ge~~~A~~~F~kAA~ 868 (950)
T 4gq2_M 816 LVEKLFLFKQYNAC----MQLIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTSL 868 (950)
T ss_dssp HHHHHHHTTCHHHH----HHHGGGCCSSHHHHHHHHHHHHHTTCHHHHHHHHHTCCC
T ss_pred HHHHHHHhcHHHHH----HHHHhhcCCChHHHHHHHHHHHHcCCHHHHHHHHHHHhh
Confidence 33444455665543 446677788888889999999999999999999998763
No 326
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=46.88 E-value=1e+02 Score=24.65 Aligned_cols=59 Identities=10% Similarity=0.050 Sum_probs=45.0
Q ss_pred hHHHHHHHHhcCHHHHHHHHHHHHhCCCCC------HHHHHH-HHHHHHH--cCCHHHHHHHHHHHHh
Q 017811 237 LNMAACLLKLKRYEEAIGQCSLVLGEDENN------VKALFR-RGKARAE--LGQTDAAREDFLKAGK 295 (365)
Q Consensus 237 ~nla~~~~kl~~~~~A~~~~~~aL~~~p~n------~ka~~~-~g~a~~~--l~~~~~A~~~l~~al~ 295 (365)
+..+..++..|+|-+|-+.++.+-...+.. .+.+.+ +|.++.+ .|+..-|...+.+++.
T Consensus 36 ~~~~i~lFn~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~ 103 (161)
T 2ijq_A 36 VVHGVRLYNSGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQ 103 (161)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 445666777799999999999988776555 345556 5555554 6999999999999987
No 327
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=46.86 E-value=1.6e+02 Score=26.34 Aligned_cols=101 Identities=8% Similarity=-0.128 Sum_probs=0.0
Q ss_pred HHHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcC----------
Q 017811 179 IGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKR---------- 248 (365)
Q Consensus 179 ~~~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~---------- 248 (365)
.+.-..++...+.|.++++|++|+.....+...+-.... ......+-..+-.+|-+.+.
T Consensus 30 YEAhQ~~Rtl~~Ry~~~~~~~eAidlL~~ga~~ll~~~Q-----------~~sa~DLa~llvev~~~~~~~~~~~~~~rl 98 (312)
T 2wpv_A 30 YEAHQTLRTIANRYVRSKSYEHAIELISQGALSFLKAKQ-----------GGSGTDLIFYLLEVYDLAEVKVDDISVARL 98 (312)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC-----------HHHHHHHHHHHHHHHHHTTCCCSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHCCC-----------cchHHHHHHHHHHHHHHcCCCCCHHHHHHH
Q ss_pred -----------------HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHcCCHHHHHHHH
Q 017811 249 -----------------YEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDF 290 (365)
Q Consensus 249 -----------------~~~A~~~~~~aL~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l 290 (365)
..+|+.+..+.=...-.++.-+..+|..|..-+++.+|...|
T Consensus 99 ~~l~~~~p~~~~~r~~fi~~ai~WS~~~g~~~~Gdp~LH~~~a~~~~~e~~~~~A~~H~ 157 (312)
T 2wpv_A 99 VRLIAELDPSEPNLKDVITGMNNWSIKFSEYKFGDPYLHNTIGSKLLEGDFVYEAERYF 157 (312)
T ss_dssp HHHHTTCCTTCTTHHHHHHHHHHHHHHTSSCTTCCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHCCCCCchHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhcCCHHHHHHHH
No 328
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=44.02 E-value=25 Score=35.21 Aligned_cols=50 Identities=16% Similarity=0.078 Sum_probs=45.4
Q ss_pred hhhhHHHHHHHHhcCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHcCCH
Q 017811 234 PCHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQT 283 (365)
Q Consensus 234 ~~~~nla~~~~kl~~~~~A~~~~~~aL~~~p~n~ka~~~~g~a~~~l~~~ 283 (365)
......|...+..|+|.-|...++.++..+|+|..|..-++.+|.++|.-
T Consensus 450 ~~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l~~~ 499 (658)
T 2cfu_A 450 ERLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLGYQ 499 (658)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHh
Confidence 34677888888999999999999999999999999999999999998854
No 329
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=42.61 E-value=31 Score=24.36 Aligned_cols=19 Identities=21% Similarity=0.274 Sum_probs=9.0
Q ss_pred HHHcCCHHHHHHHHHHHHh
Q 017811 277 RAELGQTDAAREDFLKAGK 295 (365)
Q Consensus 277 ~~~l~~~~~A~~~l~~al~ 295 (365)
.-..|+|++|+..|+.+++
T Consensus 29 ~D~~g~y~eAl~lY~~aie 47 (83)
T 2w2u_A 29 ADKEGNAEEAITNYKKAIE 47 (83)
T ss_dssp HHHTTCHHHHHHHHHHHHH
T ss_pred HHHhccHHHHHHHHHHHHH
Confidence 3445555555544444443
No 330
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=42.23 E-value=93 Score=22.31 Aligned_cols=24 Identities=29% Similarity=0.128 Sum_probs=11.9
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHhh
Q 017811 273 RGKARAELGQTDAAREDFLKAGKF 296 (365)
Q Consensus 273 ~g~a~~~l~~~~~A~~~l~~al~l 296 (365)
.|+-++..++|.+|...|+++..+
T Consensus 59 eak~~y~~~ny~ea~~l~~k~~n~ 82 (106)
T 2vkj_A 59 EGKDLFETANYGEALVFFEKALNL 82 (106)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcchhHHHHHHHHHHcc
Confidence 344444555555555555555443
No 331
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=41.14 E-value=33 Score=24.13 Aligned_cols=43 Identities=12% Similarity=0.051 Sum_probs=19.9
Q ss_pred HHHcCCHHHHHHHHH-------HHHhhCCCcHHHHHHHHHHHHHHHHHHHHHHH
Q 017811 277 RAELGQTDAAREDFL-------KAGKFAPEDKSIARELRLLAEHEKAVYKKQKE 323 (365)
Q Consensus 277 ~~~l~~~~~A~~~l~-------~al~l~P~n~~~~~~l~~l~~~~~~~~~~~k~ 323 (365)
.-..|+|++|+..|+ ++++..|+.. .. ..++.+..++......
T Consensus 21 ~D~~g~y~eAl~lY~~aie~l~~~lk~e~d~~-~k---~~ir~K~~eY~~RAE~ 70 (83)
T 2v6y_A 21 ADKEGKVEDAITYYKKAIEVLSQIIVLYPESV-AR---TAYEQMINEYKKRISY 70 (83)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHHHCTTCT-TH---HHHHHHHHHHHHHHHH
T ss_pred HHHhccHHHHHHHHHHHHHHHHHHHHHCCCHH-HH---HHHHHHHHHHHHHHHH
Confidence 344555555555444 4445555432 22 2233445555544444
No 332
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=40.90 E-value=1.1e+02 Score=22.94 Aligned_cols=20 Identities=20% Similarity=0.318 Sum_probs=9.7
Q ss_pred HHHHHHHHHhhCCCcHHHHH
Q 017811 286 AREDFLKAGKFAPEDKSIAR 305 (365)
Q Consensus 286 A~~~l~~al~l~P~n~~~~~ 305 (365)
|+..|..+++..+.+...+.
T Consensus 44 Aie~l~~alk~e~~~~~~k~ 63 (117)
T 2cpt_A 44 AVQYFLHVVKYEAQGDKAKQ 63 (117)
T ss_dssp HHHHHHHHHHTSCCCHHHHH
T ss_pred HHHHHHHHHHhccCCHHHHH
Confidence 34444444555655554443
No 333
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=40.83 E-value=42 Score=31.73 Aligned_cols=55 Identities=13% Similarity=0.095 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHh
Q 017811 198 LEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLG 261 (365)
Q Consensus 198 y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~ 261 (365)
|+..+..+..|+..+|........ -+..++.-+|.+|+-+++|++|+..+++++.
T Consensus 164 y~~I~~DL~~A~~~L~~~~~~gr~---------tk~aa~allarvyL~~~~~~~A~~~a~~vi~ 218 (454)
T 3myv_A 164 YDFIIETLEEAVTLMSEEKNNGRM---------NKYAARALLARIYLYHDDNRKAFDLADQLIK 218 (454)
T ss_dssp HHHHHHHHHHHHHHCCCSCCTTSC---------CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccccccCCee---------cHHHHHHHHHHHHHhcccHHHHHHHHHHHHh
Confidence 445566666666666643111100 0234577889999999999999999999985
No 334
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=38.91 E-value=30 Score=37.09 Aligned_cols=52 Identities=13% Similarity=0.190 Sum_probs=39.6
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 017811 239 MAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAAREDFLKAG 294 (365)
Q Consensus 239 la~~~~kl~~~~~A~~~~~~aL~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al 294 (365)
+...+++.+.++-|.. .+...|.++-.-|-+|.+++..|++++|...|++|-
T Consensus 818 l~~~l~~~~~~~~~~~----l~~~~~~~~~~~yl~g~~~L~~ge~~~A~~~F~kaa 869 (1139)
T 4fhn_B 818 LVEKLFLFKQYNACMQ----LIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTS 869 (1139)
T ss_dssp HHHHHHHHSCTTHHHH----HHHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHTCC
T ss_pred HHHHHHHhhhHHHHHH----HhhhccCCcHHHHHHHHHHHhcCCHHHHHHHHHHHh
Confidence 4444555566654433 445667888888999999999999999999999874
No 335
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=38.87 E-value=50 Score=23.06 Aligned_cols=32 Identities=13% Similarity=0.032 Sum_probs=25.8
Q ss_pred HHhhhhhhhhhhhhhHHHHHHHHHHHHHhhcc
Q 017811 183 DRRKMDGNALFKEEKLEEAMQQYEMAIAYMGD 214 (365)
Q Consensus 183 ~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~ 214 (365)
......|..+...|+|+.|+.+|+.++.....
T Consensus 13 ~e~~k~ARe~Al~GnYdta~~yY~g~~~qI~k 44 (78)
T 2rpa_A 13 VENVKLAREYALLGNYDSAMVYYQGVLDQMNK 44 (78)
T ss_dssp HHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcChHHHHHHHHHHHHHHHH
Confidence 34456777888889999999999999987654
No 336
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=38.68 E-value=47 Score=31.46 Aligned_cols=55 Identities=13% Similarity=0.134 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHh
Q 017811 198 LEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLG 261 (365)
Q Consensus 198 y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~ 261 (365)
|+..+..+..|+..+|........ -+..++.-+|.+|+-+++|++|+..+++++.
T Consensus 170 y~~I~~DL~~A~~~L~~~~~~gr~---------tk~aa~allArvyL~~~~~~~A~~~a~~vi~ 224 (461)
T 3kez_A 170 YTEIISDLKNSTELLSGDFNKGKV---------NRWAAMTLLSRVYLYKGEYNEALTMAENAIK 224 (461)
T ss_dssp HHHHHHHHHHHHHHSCCSCCTTSC---------CHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCccccCCCee---------eHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 344555566666666643211100 0234577788899999999999999999985
No 337
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=37.90 E-value=46 Score=24.20 Aligned_cols=27 Identities=11% Similarity=0.123 Sum_probs=16.2
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHhhCCC
Q 017811 273 RGKARAELGQTDAAREDFLKAGKFAPE 299 (365)
Q Consensus 273 ~g~a~~~l~~~~~A~~~l~~al~l~P~ 299 (365)
+|..+...|+++.|+..|-+|+.+.|+
T Consensus 26 lGE~L~~~g~~e~av~Hf~nAl~Vc~q 52 (95)
T 1om2_A 26 LGEELLAQGDYEKGVDHLTNAIAVCGQ 52 (95)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHcCC
Confidence 555556666666666666666666554
No 338
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=37.18 E-value=96 Score=24.88 Aligned_cols=68 Identities=10% Similarity=0.066 Sum_probs=48.5
Q ss_pred hhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhh-hHHHHHHHHhcCHHHHHHHHHHHHh
Q 017811 185 RKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCH-LNMAACLLKLKRYEEAIGQCSLVLG 261 (365)
Q Consensus 185 ~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~-~nla~~~~kl~~~~~A~~~~~~aL~ 261 (365)
-...|..+|..|+|-+|-+.++.+-...+... ..+.. ++.-+. +-.|..+.+.|++..|...+.+++.
T Consensus 35 ~~~~~i~lFn~g~yfeaHEvLEe~W~~~~~~~------~er~~---lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~ 103 (161)
T 2ijq_A 35 AVVHGVRLYNSGEFHESHDCFEDEWYNYGRGN------TESKF---LHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQ 103 (161)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHTTTTCSSS------HHHHH---HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCchHHHHHHHHHHHhcCCCc------hHHHH---HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 46688899999999999999998876654320 01111 222234 5566677778999999999999875
No 339
>3qnk_A Putative lipoprotein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=37.09 E-value=1.6e+02 Score=28.22 Aligned_cols=48 Identities=6% Similarity=-0.062 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHhCCCC-----------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 017811 249 YEEAIGQCSLVLGEDEN-----------NVKALFRRGKARAELGQTDAAREDFLKAGKF 296 (365)
Q Consensus 249 ~~~A~~~~~~aL~~~p~-----------n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l 296 (365)
|+..+.+++.|+..=|. -.-|+--+|++|+..++|++|....++++..
T Consensus 153 ~~~I~~dL~~A~~~Lp~~~~~~~~gr~tk~aA~allarv~L~~~~~~~A~~~a~~vi~~ 211 (517)
T 3qnk_A 153 YDFILEDLKKATEMLPASYGSREKGRATKGAAYALKSRVELYDKRYEDVIKSCAEVYKL 211 (517)
T ss_dssp HHHHHHHHHHHHHHSCSCCCSTTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhCccccCCcccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 44556666666543332 2348888999999999999999999999863
No 340
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=36.28 E-value=2e+02 Score=24.38 Aligned_cols=60 Identities=12% Similarity=0.033 Sum_probs=43.0
Q ss_pred hhHHHHHHHHhcCHHHHHHHHHHHH--hCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Q 017811 236 HLNMAACLLKLKRYEEAIGQCSLVL--GEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFA 297 (365)
Q Consensus 236 ~~nla~~~~kl~~~~~A~~~~~~aL--~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~ 297 (365)
|+++=+-|....+ .+...|.... .+--..+..|-..|..+...|+|.+|...|+.+++..
T Consensus 119 yLklWl~Ya~~~~--~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~ 180 (223)
T 4aez_C 119 YLRIWMQYVNYID--EPVELFSFLAHHHIGQESSIFYEEYANYFESRGLFQKADEVYQKGKRMK 180 (223)
T ss_dssp HHHHHHHHHTTCS--CHHHHHHHHHHTTCSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHccC--CHHHHHHHHHHCCcchhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC
Confidence 4455455555433 4445555544 4556677778888999999999999999999999865
No 341
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=35.86 E-value=1.1e+02 Score=26.15 Aligned_cols=71 Identities=11% Similarity=-0.026 Sum_probs=45.9
Q ss_pred HHHhhhhhhhh-----hhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHH-hcCHHHHHHH
Q 017811 182 ADRRKMDGNAL-----FKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLK-LKRYEEAIGQ 255 (365)
Q Consensus 182 a~~~k~~G~~~-----~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~k-l~~~~~A~~~ 255 (365)
+--+|..|.-+ |..|+-+.|...|+.|..+......- ...++..+.+|.+..|+. +++.++|+..
T Consensus 120 VFY~KMKGDYyRYlAE~~~g~~e~a~~aY~~A~~iA~~~L~p---------thPirLGLaLNfSVFyYEIln~p~~Ac~l 190 (227)
T 2o8p_A 120 FFKLKVKSDISRYKLEFGLCSLEDSKKIHQDAFTLLCEHPDK---------IEQLPLGFIQNLAYILSEKYGEKKQVFNM 190 (227)
T ss_dssp HHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHCGGG---------GGGSCHHHHHHHHHHHHHTSSCHHHHHHH
T ss_pred HHHHHHhhhHHHHHHHHccccHHHHHHHHHHHHHHHHhhCCC---------CChHHHHHHHHHHHHHHHHccCHHHHHHH
Confidence 44555556532 34455678999999998875321100 022344567777777664 6899999999
Q ss_pred HHHHHh
Q 017811 256 CSLVLG 261 (365)
Q Consensus 256 ~~~aL~ 261 (365)
..+|+.
T Consensus 191 Ak~Afd 196 (227)
T 2o8p_A 191 LNSLGK 196 (227)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999876
No 342
>3qtm_A Uncharacterized protein C4B3.07; tetratricopeptide repeat, enhancer of translation terminatio translation; HET: CME; 2.15A {Schizosaccharomyces pombe} PDB: 3qtn_B
Probab=35.31 E-value=2.3e+02 Score=24.87 Aligned_cols=107 Identities=14% Similarity=0.062 Sum_probs=65.1
Q ss_pred CHHHHHHHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhh-hhhhHHHHHHHhhchhhhHHHHHH----HHhc-
Q 017811 174 TVEERIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQ-LFGKYRDMALAVKNPCHLNMAACL----LKLK- 247 (365)
Q Consensus 174 ~~~e~~~~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~-~~~~~~~~~~~~~~~~~~nla~~~----~kl~- 247 (365)
+.+..+.+..-+.++....+..|+.+..+...+-.|.-...-.... ....-.+.+..+.+.+++.++... ++.+
T Consensus 14 ~~~d~~sql~gly~msre~le~g~i~~sv~LLNGIIHECDRLLR~~e~~~~Lpd~FhAIYAlALl~lSELa~~a~Fk~ed 93 (346)
T 3qtm_A 14 TEEDNISQLWGLYEMSREKLENDDIDASVSLVFGTIHEADRILRNTEDISTLPKDFHAAYSSALLAVSELFEIAQKRLKE 93 (346)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHCSCGGGSCHHHHHHHHHHHHHHHHTHHHHGGGSCT
T ss_pred eccchHHHHHhHHHHHHHHhhccCchhhhHHHcChHHHHHHHHHccCCCCCCCHHHHHHHHHHHHhHHHhhHHhhccCch
Confidence 3445666777788888888899998888777665554332210000 000112233333333442222222 3322
Q ss_pred ------CHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHc
Q 017811 248 ------RYEEAIGQCSLVLGEDENNVKALFRRGKARAEL 280 (365)
Q Consensus 248 ------~~~~A~~~~~~aL~~~p~n~ka~~~~g~a~~~l 280 (365)
=|+.|++-++..|+..|++..-.+-+++++++.
T Consensus 94 e~~V~eFFDaALERielGLe~~p~s~~L~la~SKILlqr 132 (346)
T 3qtm_A 94 TNTEESYIDAAIERAQLGLDAPGNESRLFLALARAYLEK 132 (346)
T ss_dssp TCCHHHHHHHHHHHHHHGGGSSSCCHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHhhhhhCCCChhHHHHHHHHHHHH
Confidence 278899999999999999999888888888764
No 343
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=34.86 E-value=49 Score=31.45 Aligned_cols=28 Identities=14% Similarity=0.280 Sum_probs=25.0
Q ss_pred hhhhHHHHHHHHhcCHHHHHHHHHHHHh
Q 017811 234 PCHLNMAACLLKLKRYEEAIGQCSLVLG 261 (365)
Q Consensus 234 ~~~~nla~~~~kl~~~~~A~~~~~~aL~ 261 (365)
.++.-+|.+|+-+++|++|+..+++++.
T Consensus 203 aa~allarvyL~~~~~~~A~~~a~~vi~ 230 (477)
T 3mcx_A 203 AAQALLSRVYLNMGEYQKAYDAATDVIK 230 (477)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 4577889999999999999999999985
No 344
>2yin_A DOCK2, dedicator of cytokinesis protein 2; apoptosis, DOCK, DOCK guanine nucleotide exchange factors; 2.70A {Homo sapiens} PDB: 3b13_A
Probab=34.80 E-value=33 Score=32.47 Aligned_cols=96 Identities=13% Similarity=0.001 Sum_probs=54.4
Q ss_pred hhhhhhhhhhhhHHHHHHHHHHHHHhhccchh--hh--hh-hh-HHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHH
Q 017811 186 KMDGNALFKEEKLEEAMQQYEMAIAYMGDDFM--FQ--LF-GK-YRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLV 259 (365)
Q Consensus 186 k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~--~~--~~-~~-~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~a 259 (365)
...++.+...++|.+|.-++.....+..-+.. .+ .. +. ........+..+|...+..+.+-+.|+.|+..|+.+
T Consensus 39 ~~L~~~h~~~~ny~EAa~~l~lhA~l~~w~~~~~~~~~~~~~~~~~qt~~~~ke~L~~~~i~~f~kg~~~E~ai~l~k~L 118 (436)
T 2yin_A 39 YKLRDLHLDCDNYTEAAYTLLLHTWLLKWSDEQCASQVMQTGQQHPQTHRQLKETLYETIIGYFDKGKMWEEAISLCKEL 118 (436)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHTTCCSSCCC--------------CHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHCcCHHHHHHHHHHHHHHhCCCccccCcccccCCCCccccHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHH
Confidence 45688889999999999988655444321100 00 00 00 011112233445666677777778899999999988
Q ss_pred HhCCCCCHHHHHHHHHHHHHcC
Q 017811 260 LGEDENNVKALFRRGKARAELG 281 (365)
Q Consensus 260 L~~~p~n~ka~~~~g~a~~~l~ 281 (365)
+...-.+..-|-.++.++..+.
T Consensus 119 ~~~yE~~~~Dy~~Ls~~~~~~a 140 (436)
T 2yin_A 119 AEQYEMEIFDYELLSQNLIQQA 140 (436)
T ss_dssp HHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 7654433333445555555443
No 345
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=34.07 E-value=1.2e+02 Score=21.32 Aligned_cols=25 Identities=8% Similarity=-0.017 Sum_probs=15.0
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHh
Q 017811 271 FRRGKARAELGQTDAAREDFLKAGK 295 (365)
Q Consensus 271 ~~~g~a~~~l~~~~~A~~~l~~al~ 295 (365)
..+|.-.-..|+|++|+..|..+++
T Consensus 20 v~~Ave~D~~g~y~eAl~lY~~Aie 44 (86)
T 4a5x_A 20 LKRAVELDSESRYPQALVCYQEGID 44 (86)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3444445566777666666666654
No 346
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=33.38 E-value=73 Score=27.81 Aligned_cols=52 Identities=19% Similarity=0.241 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHH-hcCHHHHHHHHHHHH
Q 017811 199 EEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLK-LKRYEEAIGQCSLVL 260 (365)
Q Consensus 199 ~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~k-l~~~~~A~~~~~~aL 260 (365)
+.|...|+.|+.+. .... . ...++..+.+|.+..|+. +++.++|+..+.+|+
T Consensus 173 e~a~~aY~~A~~iA-~~L~----p-----thPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Af 225 (260)
T 2npm_A 173 EDALKAYKDATVVA-KDLE----P-----THPIRLGLALNFSVFHYEILNEPRAAIDMAKEAF 225 (260)
T ss_dssp HHHHHHHHHHHHHH-TTSC----T-----TCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-HhCC----C-----CCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 46788899998875 3110 0 012345567777777776 789999998888766
No 347
>2rkl_A Vacuolar protein sorting-associated protein VTA1; dimerization motif, cytoplasm, endosome, lipid transport, membrane, protein transport; 1.50A {Saccharomyces cerevisiae} PDB: 3mhv_A
Probab=31.25 E-value=65 Score=20.67 Aligned_cols=39 Identities=13% Similarity=0.129 Sum_probs=31.5
Q ss_pred CHHHHHHHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhh
Q 017811 174 TVEERIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYM 212 (365)
Q Consensus 174 ~~~e~~~~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~ 212 (365)
+..+.+..|.++-.-+...+.-.+...|++..++||+++
T Consensus 12 ~~~~~i~~AqK~aK~AiSAL~feDv~tA~~~L~~AL~lL 50 (53)
T 2rkl_A 12 DRASKIEQIQKLAKYAISALNYEDLPTAKDELTKALDLL 50 (53)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHH
Confidence 345677788888888888888888889999999888875
No 348
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=30.81 E-value=75 Score=30.37 Aligned_cols=59 Identities=10% Similarity=0.117 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHhC
Q 017811 198 LEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGE 262 (365)
Q Consensus 198 y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~~ 262 (365)
|+..+..+..|+..+|......... .--+..++.-+|.+|+-+++|++|+..+++++..
T Consensus 174 y~~I~~DL~~A~~~Lp~~~~~~~~g------r~tk~aA~allArvyL~~~~~~~A~~~a~~vi~~ 232 (495)
T 3lew_A 174 YAQSINDLEEALELIPETYVRDAKH------KIDNEVVLGILSRACLYARQWEKAKTYSDKLLAK 232 (495)
T ss_dssp HHHHHHHHHHHHHHSCTTCCCSSTT------SCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccccCcccCC------cccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 4556666677777776432100000 0001345778899999999999999999999853
No 349
>2zan_A Vacuolar protein sorting-associating protein 4B; SKD1, VPS4B, AAA ATPase, ATP-binding, coiled coil, membrane, nucleotide-binding, phosphorylation; HET: ATP; 3.00A {Mus musculus} PDB: 2zam_A* 2zao_A* 2jqh_A 2jqk_A 1wr0_A 2jq9_A 2k3w_A 1yxr_A
Probab=30.46 E-value=11 Score=35.88 Aligned_cols=38 Identities=24% Similarity=0.218 Sum_probs=0.0
Q ss_pred HHHHHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhhcc
Q 017811 177 ERIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGD 214 (365)
Q Consensus 177 e~~~~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~~~ 214 (365)
+.++.|..+..+|..+-+.|+|.+|+.+|..|++++-.
T Consensus 6 ~~~~~A~~~~~~Av~~D~~g~~~eA~~~Y~~a~~~l~~ 43 (444)
T 2zan_A 6 TNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLH 43 (444)
T ss_dssp --------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 34567788888999999999999999999999998754
No 350
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=29.07 E-value=76 Score=26.39 Aligned_cols=34 Identities=15% Similarity=-0.013 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCc
Q 017811 267 VKALFRRGKARAELGQTDAAREDFLKAGKFAPED 300 (365)
Q Consensus 267 ~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~P~n 300 (365)
+..+|.+|+.++..++|.+|..+|..|+...|.+
T Consensus 14 v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~ 47 (203)
T 3t5x_A 14 VTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRS 47 (203)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHh
Confidence 4567888999999999999999999999988865
No 351
>2xze_A STAM-binding protein; hydrolase-protein transport complex; 1.75A {Homo sapiens}
Probab=27.99 E-value=1e+02 Score=24.26 Aligned_cols=41 Identities=15% Similarity=0.129 Sum_probs=35.8
Q ss_pred CCCHHHHHHHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhh
Q 017811 172 DMTVEERIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYM 212 (365)
Q Consensus 172 ~~~~~e~~~~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~ 212 (365)
..+...-+..|..+...|..|...|++..|.-.|.+++.+.
T Consensus 30 ~i~l~~ylrta~~llr~A~~y~~egd~e~AYily~R~~~L~ 70 (146)
T 2xze_A 30 DIPPRRYFRSGVEIIRMASIYSEEGNIEHAFILYNKYITLF 70 (146)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 45677788999999999999999999999999999976554
No 352
>3bu8_A Telomeric repeat-binding factor 2; TRF2 TRFH domain TRF2 dimerization domain TIN2 peptide, alternative splicing, cell cycle, chromosomal protein; 2.15A {Homo sapiens} SCOP: a.146.1.1 PDB: 3bua_A* 1h6p_A
Probab=27.14 E-value=73 Score=27.00 Aligned_cols=64 Identities=13% Similarity=0.034 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHhCCCCCHH-------HHHHHHH-HHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHH
Q 017811 249 YEEAIGQCSLVLGEDENNVK-------ALFRRGK-ARAELGQTDAAREDFLKAGKFAPEDKSIARELRLLAE 312 (365)
Q Consensus 249 ~~~A~~~~~~aL~~~p~n~k-------a~~~~g~-a~~~l~~~~~A~~~l~~al~l~P~n~~~~~~l~~l~~ 312 (365)
.+.|+..++..-+..+-..+ .+--.+. +++..|.|++|...|++.+.-+|.+...+..|..+-.
T Consensus 88 LESAl~v~~~I~~e~~l~~~l~e~i~~llk~qAV~VCiek~~f~kA~eiLkr~~~~~~s~~kLr~kL~~II~ 159 (235)
T 3bu8_A 88 LESAINVLEMIKTEFTLTEAVVESSRKLVKEAAVIICIKNKEFEKASKILKKHMSKDPTTQKLRNDLLNIIR 159 (235)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHSTTCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHhcCCCCchHHHHHHHHHHh
Confidence 45566666655444432222 2222333 4578999999999999999988888877777766643
No 353
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=25.94 E-value=1.8e+02 Score=20.69 Aligned_cols=21 Identities=5% Similarity=-0.156 Sum_probs=9.7
Q ss_pred HHHHHcCCHHHHHHHHHHHHh
Q 017811 275 KARAELGQTDAAREDFLKAGK 295 (365)
Q Consensus 275 ~a~~~l~~~~~A~~~l~~al~ 295 (365)
.-.-..|+|++|+..|..+++
T Consensus 23 ve~D~~g~y~eAl~~Y~~Aie 43 (93)
T 1wfd_A 23 VELDAESRYQQALVCYQEGID 43 (93)
T ss_dssp HHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHhCCHHHHHHHHHHHHH
Confidence 333444555555544444443
No 354
>3jq1_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE; 1.55A {Bacteroides vulgatus atcc 8482}
Probab=25.77 E-value=92 Score=29.61 Aligned_cols=28 Identities=11% Similarity=0.096 Sum_probs=24.5
Q ss_pred hhhhHHHHHHHHhcCHHHHHHHHHHHHh
Q 017811 234 PCHLNMAACLLKLKRYEEAIGQCSLVLG 261 (365)
Q Consensus 234 ~~~~nla~~~~kl~~~~~A~~~~~~aL~ 261 (365)
.++.-+|.+|+-+++|++|+..+++++.
T Consensus 181 aA~allarvyL~~~~~~~A~~~a~~vi~ 208 (481)
T 3jq1_A 181 AAYAALGKIYVYEENWQEAINVLEPLTQ 208 (481)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHGGGGS
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 3577788999999999999999999984
No 355
>3ub0_A Non-structural protein 6, NSP6,; feline coronavirus, primer-independen polymerase, replication; 2.60A {Feline infectious peritonitis virus}
Probab=24.92 E-value=2.8e+02 Score=22.62 Aligned_cols=33 Identities=12% Similarity=0.148 Sum_probs=16.3
Q ss_pred HhcccCCCCCccccchhHHHHHHHHHHHHHHHH
Q 017811 325 YKGIFGPRPEPKQKKNWLIIFWQLLVSLVLGLF 357 (365)
Q Consensus 325 y~kmf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (365)
...|+..-+..+.+.-........|||.+.+|.
T Consensus 71 mt~MYKeARa~drksKvvSam~~mLF~MlrrLD 103 (199)
T 3ub0_A 71 AASMYKEARAVDRKSKIVSAMHSLLFGMLKKLD 103 (199)
T ss_dssp HHHHTTC-----CCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHh
Confidence 445566666655554444455666777666654
No 356
>2oo2_A Hypothetical protein AF_1782; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Archaeoglobus fulgidus dsm 4304} SCOP: a.8.11.1
Probab=24.92 E-value=1e+02 Score=21.94 Aligned_cols=37 Identities=16% Similarity=0.162 Sum_probs=31.5
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhh
Q 017811 176 EERIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYM 212 (365)
Q Consensus 176 ~e~~~~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~ 212 (365)
.+.++.|..+.+.|..++++|++..|+.++.=|--++
T Consensus 29 ~~~l~mA~~Y~~Da~~fl~kGD~v~Ala~isYa~GwL 65 (86)
T 2oo2_A 29 EGFMRNIEAYISDSRYFLEKGDLVRAFECVVWAWAWL 65 (86)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 5678899999999999999999999999877665554
No 357
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=24.85 E-value=2.6e+02 Score=22.08 Aligned_cols=60 Identities=5% Similarity=-0.010 Sum_probs=42.8
Q ss_pred hhHHHHHHHHhcCHHHHHHHHHHHH--hCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Q 017811 236 HLNMAACLLKLKRYEEAIGQCSLVL--GEDENNVKALFRRGKARAELGQTDAAREDFLKAGKFA 297 (365)
Q Consensus 236 ~~nla~~~~kl~~~~~A~~~~~~aL--~~~p~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l~ 297 (365)
|+++=.-|..+.. .+...|.... .+--..+..|-.-|..+...|+|.+|...|+.+++..
T Consensus 70 yLklWl~ya~~~~--dp~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~ 131 (152)
T 4a1g_A 70 FISYCLKFAEYNS--DLHQFFEFLYNHGIGTLSSPLYIAWAGHLEAQGELQHASAVLQRGIQNQ 131 (152)
T ss_dssp HHHHHHHHHTTBS--CHHHHHHHHHTTTTTTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhcC--CHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC
Confidence 4555455554432 3555565554 4455667777788999999999999999999999864
No 358
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=24.84 E-value=1.3e+02 Score=21.52 Aligned_cols=63 Identities=13% Similarity=0.029 Sum_probs=40.2
Q ss_pred hhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHh
Q 017811 186 KMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLG 261 (365)
Q Consensus 186 k~~G~~~~~~~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~ 261 (365)
...|..+|..|+|-+|-+.++.+-...+.. .+.. +..-+..-.|..+.+.|++ |...+.+++.
T Consensus 5 ~~~~~~lfn~g~~~eaHEvlE~~W~~~~~~--------~~~~---~qGLIq~Ava~~h~~~gn~--a~~ll~~a~~ 67 (94)
T 2cwy_A 5 WEEVLGLWRAGRYYEVHEVLEPYWLKATGE--------ERRL---LQGVILLAAALHQRRLGRP--GLRNLRKAEA 67 (94)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCCHH--------HHHH---HHHHHHHHHHHHHHHTTCC--CHHHHHHHHH
T ss_pred HHHHHHHHhCCChHHHHHHHHHHHhhCCCc--------hHHH---HHHHHHHHHHHHHHHcCcH--HHHHHHHHHH
Confidence 346788999999999999998887665431 1111 1222334445555566776 7777777754
No 359
>3qnk_A Putative lipoprotein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=24.78 E-value=77 Score=30.48 Aligned_cols=59 Identities=20% Similarity=0.221 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHhC
Q 017811 198 LEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLGE 262 (365)
Q Consensus 198 y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~~ 262 (365)
|+..+..+..|+..+|........+. --+..++.-+|.+|+-.++|++|+..|++++..
T Consensus 153 ~~~I~~dL~~A~~~Lp~~~~~~~~gr------~tk~aA~allarv~L~~~~~~~A~~~a~~vi~~ 211 (517)
T 3qnk_A 153 YDFILEDLKKATEMLPASYGSREKGR------ATKGAAYALKSRVELYDKRYEDVIKSCAEVYKL 211 (517)
T ss_dssp HHHHHHHHHHHHHHSCSCCCSTTTTS------CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhCccccCCcccCc------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34455566666666664211000000 001345778889999999999999999999963
No 360
>3i4g_A SUSD-like carbohydrate binding protein BF1063; structural genomics, center for structural genomics, JCSG; HET: MSE EPE; 1.35A {Bacteroides fragilis nctc 9343}
Probab=24.77 E-value=2.7e+02 Score=26.67 Aligned_cols=93 Identities=8% Similarity=-0.020 Sum_probs=0.0
Q ss_pred hhHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHHhcC---------------------------
Q 017811 196 EKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLKLKR--------------------------- 248 (365)
Q Consensus 196 ~~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~kl~~--------------------------- 248 (365)
..+-.+|.....+|+..+.. -.......+...+++-+|.+|+.|-+
T Consensus 93 ~~~Y~~I~~~N~~l~~i~~~-------~~~~~~~~~~aEa~flRA~~Yf~L~~~yG~VPl~~~~~~~~~~~~~~r~~~~e 165 (528)
T 3i4g_A 93 ETSYKRIGYCNRFLVGIQNS-------SESEKKTRMIAEARFLRATQYFYLASYFKNVPLVENVLTGEEANNVTKTSQAD 165 (528)
T ss_dssp HHHHHHHHHHHHHHHHHTTS-------CCCHHHHHHHHHHHHHHHHHHHHHHHHTCSBCCCCSCCCHHHHTTCCCBCHHH
T ss_pred HHHHHHHHHHHHHHHhhhcc-------CCHHHHHHHHHHHHHHHHHHHHHHHHHcCCcceeCCCCCccccccCCCCCHHH
Q ss_pred -HHHHHHHHHHHHhCCC-------------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q 017811 249 -YEEAIGQCSLVLGEDE-------------NNVKALFRRGKARAELGQTDAAREDFLKAGK 295 (365)
Q Consensus 249 -~~~A~~~~~~aL~~~p-------------~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~ 295 (365)
|+..+.+++.|+..=| +-.-|+--+|++|+..++|++|....+.++.
T Consensus 166 v~~~I~~DL~~A~~~Lp~~~~~~~~~~gr~tk~aA~allarv~L~~~~~~~A~~~a~~vi~ 226 (528)
T 3i4g_A 166 ILKWCVTEFTAAAADLPRFSAIPAGEAGRACKQAALAFLGRTCMLQKDWKSGAKAFHDIME 226 (528)
T ss_dssp HHHHHHHHHHHHHHHSCCGGGCCGGGTTSCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCccccCCcccCCcCcHHHHHHHHHHHHHHHhHHHHHHHHHHHHHh
No 361
>2pmr_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.32A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.8.11.1
Probab=24.76 E-value=1.1e+02 Score=21.81 Aligned_cols=38 Identities=11% Similarity=0.002 Sum_probs=31.2
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHhh
Q 017811 175 VEERIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYM 212 (365)
Q Consensus 175 ~~e~~~~a~~~k~~G~~~~~~~~y~~A~~~y~~al~~~ 212 (365)
..+.++.|..+.+.|..++++|++..|+.++.=|--++
T Consensus 32 a~~~l~mA~~Y~~Da~~fl~kGD~v~Ala~isYa~GwL 69 (87)
T 2pmr_A 32 EEAVVERALNYRDDSVYYLEKGDHITSFGCITYAHGLL 69 (87)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 35678899999999999999999999998877665443
No 362
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=24.46 E-value=88 Score=29.48 Aligned_cols=47 Identities=11% Similarity=-0.139 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHhCCCC--------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q 017811 249 YEEAIGQCSLVLGEDEN--------NVKALFRRGKARAELGQTDAAREDFLKAGK 295 (365)
Q Consensus 249 ~~~A~~~~~~aL~~~p~--------n~ka~~~~g~a~~~l~~~~~A~~~l~~al~ 295 (365)
|+..+.+++.|+..=|. -.-|+--+|++|+..++|++|....++++.
T Consensus 164 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~ 218 (454)
T 3myv_A 164 YDFIIETLEEAVTLMSEEKNNGRMNKYAARALLARIYLYHDDNRKAFDLADQLIK 218 (454)
T ss_dssp HHHHHHHHHHHHHHCCCSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccccccCCeecHHHHHHHHHHHHHhcccHHHHHHHHHHHHh
Confidence 44566666666654332 245888899999999999999999998875
No 363
>3otn_A SUSD superfamily protein; putative outer membrane protein, carbohydrate binding, structural genomics; HET: MSE; 1.95A {Parabacteroides distasonis}
Probab=24.43 E-value=2.7e+02 Score=26.21 Aligned_cols=47 Identities=9% Similarity=-0.140 Sum_probs=34.5
Q ss_pred HH-HHHHHHHHHHhC-CC--------CCHHHHHHHHHHHHHcC---------CHHHHHHHHHHHHh
Q 017811 249 YE-EAIGQCSLVLGE-DE--------NNVKALFRRGKARAELG---------QTDAAREDFLKAGK 295 (365)
Q Consensus 249 ~~-~A~~~~~~aL~~-~p--------~n~ka~~~~g~a~~~l~---------~~~~A~~~l~~al~ 295 (365)
|+ ..+.+++.|+.. -| +-.-|+--+|++|+..+ +|++|....++++.
T Consensus 160 y~~~I~~DL~~A~~~~Lp~~~~~gr~tk~aA~allarvyL~~~~~~~~~~~~~~~~A~~~a~~vi~ 225 (482)
T 3otn_A 160 YDEIIIPDLLEAEQSDLAFSDHTGRVSMGAVKALLADVYLTYAGYPLQGGKSYYAESAKRSLEVIK 225 (482)
T ss_dssp HHHTHHHHHHHHHTSCCCSCCSSSCCCHHHHHHHHHHHHHHHHSTTTCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCcCcCCcCcHHHHHHHHHHHHHHhCCCcccCcHHHHHHHHHHHHHHHc
Confidence 55 566677777765 33 12347778888888887 89999998888876
No 364
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=29.82 E-value=16 Score=36.70 Aligned_cols=53 Identities=17% Similarity=0.111 Sum_probs=47.2
Q ss_pred hhhhHHHHHHHHhcCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHcCCHHHH
Q 017811 234 PCHLNMAACLLKLKRYEEAIGQCSLVLGEDENNVKALFRRGKARAELGQTDAA 286 (365)
Q Consensus 234 ~~~~nla~~~~kl~~~~~A~~~~~~aL~~~p~n~ka~~~~g~a~~~l~~~~~A 286 (365)
...+..|...+..|+|.-|...++.++..+|+|..|..-++.+|.++|.-.+.
T Consensus 462 ~~~~~~a~~~~~~g~~~wa~~l~~~~~~a~p~~~~ar~l~a~~~~~l~~~~~~ 514 (668)
T 2yhe_A 462 DAVLKQMRAAIDKGDYRWAVQLGNHLVFADPANKDARALQADAMEQLGYQTEN 514 (668)
Confidence 34677888888999999999999999999999999999999999999976553
No 365
>2f23_A Anti-cleavage anti-GREA transcription factor GFH1; anti-GREA GFH1 thermus thermophilus; 1.60A {Thermus thermophilus} SCOP: a.2.1.1 d.26.1.2 PDB: 2eul_A 3aoh_X* 3aoi_X* 2etn_A
Probab=23.78 E-value=1.4e+02 Score=23.51 Aligned_cols=22 Identities=9% Similarity=0.101 Sum_probs=18.7
Q ss_pred hhHHHHHhcCCcCcEEEEEecc
Q 017811 110 TGLAIGVSSMKAGEHALLHVGW 131 (365)
Q Consensus 110 ~g~e~~l~~Mk~GE~~~~~i~~ 131 (365)
..+-.||.+.++|+.+.+..|.
T Consensus 123 SPlG~ALlGk~~GD~v~~~~p~ 144 (156)
T 2f23_A 123 SPMGKALLGHRVGDVLSLDTPK 144 (156)
T ss_dssp SHHHHHHTTCCTTCEEEEEETT
T ss_pred CHHHHHHcCCCCCCEEEEEcCC
Confidence 4567899999999999998754
No 366
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=23.15 E-value=1.9e+02 Score=20.01 Aligned_cols=24 Identities=21% Similarity=0.159 Sum_probs=13.0
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHh
Q 017811 272 RRGKARAELGQTDAAREDFLKAGK 295 (365)
Q Consensus 272 ~~g~a~~~l~~~~~A~~~l~~al~ 295 (365)
.+|+=|..+|+|+.|+.+|+-++.
T Consensus 17 k~ARe~Al~GnYdta~~yY~g~~~ 40 (78)
T 2rpa_A 17 KLAREYALLGNYDSAMVYYQGVLD 40 (78)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHhcChHHHHHHHHHHHH
Confidence 445555555555555555555543
No 367
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=23.05 E-value=1.5e+02 Score=28.15 Aligned_cols=48 Identities=19% Similarity=-0.048 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHhCCC-----------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 017811 249 YEEAIGQCSLVLGEDE-----------NNVKALFRRGKARAELGQTDAAREDFLKAGKF 296 (365)
Q Consensus 249 ~~~A~~~~~~aL~~~p-----------~n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l 296 (365)
|+..+.+++.|+..-| +-.-|+--+|++|+.+++|++|....++++..
T Consensus 174 y~~I~~DL~~A~~~Lp~~~~~~~~gr~tk~aA~allArvyL~~~~~~~A~~~a~~vi~~ 232 (495)
T 3lew_A 174 YAQSINDLEEALELIPETYVRDAKHKIDNEVVLGILSRACLYARQWEKAKTYSDKLLAK 232 (495)
T ss_dssp HHHHHHHHHHHHHHSCTTCCCSSTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccccCcccCCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 3455556666654333 22348888999999999999999999999865
No 368
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=22.54 E-value=1.1e+02 Score=28.99 Aligned_cols=48 Identities=17% Similarity=0.091 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHhCCCC--------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 017811 249 YEEAIGQCSLVLGEDEN--------NVKALFRRGKARAELGQTDAAREDFLKAGKF 296 (365)
Q Consensus 249 ~~~A~~~~~~aL~~~p~--------n~ka~~~~g~a~~~l~~~~~A~~~l~~al~l 296 (365)
|+..+.+++.|+..=|. -.-|+--+|++|+..++|++|....++++..
T Consensus 176 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~ 231 (477)
T 3mcx_A 176 YEQVVSDMSNALSGLRQETSNGYINYWAAQALLSRVYLNMGEYQKAYDAATDVIKN 231 (477)
T ss_dssp HHHHHHHHHHHGGGSCSSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcccccCCcCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhC
Confidence 56677778877765443 2347888999999999999999999999864
No 369
>2p4v_A Transcription elongation factor GREB; transcript cleavage, GRE-factors, RNA polymerase; 2.60A {Escherichia coli}
Probab=21.95 E-value=2.1e+02 Score=22.57 Aligned_cols=23 Identities=13% Similarity=0.150 Sum_probs=19.0
Q ss_pred hhhhHHHHHhcCCcCcEEEEEec
Q 017811 108 EMTGLAIGVSSMKAGEHALLHVG 130 (365)
Q Consensus 108 ~i~g~e~~l~~Mk~GE~~~~~i~ 130 (365)
+...+-.||.+-++|+.+.+..|
T Consensus 120 ~~SPlg~ALlGk~vGD~v~v~~P 142 (158)
T 2p4v_A 120 IDSPMARALLKKEVGDLAVVNTP 142 (158)
T ss_dssp TTSHHHHHSTTCCTTCEEEEECS
T ss_pred CCCHHHHHhcCCCCCCEEEEEcC
Confidence 34567789999999999998764
No 370
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=21.18 E-value=1.6e+02 Score=27.64 Aligned_cols=47 Identities=17% Similarity=-0.026 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHhCCCC--------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q 017811 249 YEEAIGQCSLVLGEDEN--------NVKALFRRGKARAELGQTDAAREDFLKAGK 295 (365)
Q Consensus 249 ~~~A~~~~~~aL~~~p~--------n~ka~~~~g~a~~~l~~~~~A~~~l~~al~ 295 (365)
|+..+.+++.|+.+=|. -.-|+--+|++|+..++|++|....+.++.
T Consensus 170 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allArvyL~~~~~~~A~~~a~~vi~ 224 (461)
T 3kez_A 170 YTEIISDLKNSTELLSGDFNKGKVNRWAAMTLLSRVYLYKGEYNEALTMAENAIK 224 (461)
T ss_dssp HHHHHHHHHHHHHHSCCSCCTTSCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCccccCCCeeeHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 45566667776654332 245888899999999999999999998875
No 371
>3jys_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE; 2.00A {Bacteroides vulgatus atcc 8482}
Probab=20.94 E-value=1.1e+02 Score=29.32 Aligned_cols=32 Identities=28% Similarity=0.337 Sum_probs=21.5
Q ss_pred HHhhchhhhHHHHHHHHhcCHHHHHHHHHHHHh
Q 017811 229 LAVKNPCHLNMAACLLKLKRYEEAIGQCSLVLG 261 (365)
Q Consensus 229 ~~~~~~~~~nla~~~~kl~~~~~A~~~~~~aL~ 261 (365)
..+++++|++. .+|...++|++|+..|++++.
T Consensus 191 ~allarvyL~~-~~y~~~~~~~~A~~~a~~vi~ 222 (499)
T 3jys_A 191 SALLARMYLNA-EIYTGKARYTECINACNEVIK 222 (499)
T ss_dssp HHHHHHHHHTH-HHHHSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhh-hhccChhHHHHHHHHHHHHHh
Confidence 34444445443 234467899999999999984
No 372
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=20.81 E-value=2e+02 Score=25.04 Aligned_cols=58 Identities=16% Similarity=0.048 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHhhchhhhHHHHHHHH-hcCHHHHHHHHHHHHhC
Q 017811 198 LEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLLK-LKRYEEAIGQCSLVLGE 262 (365)
Q Consensus 198 y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~k-l~~~~~A~~~~~~aL~~ 262 (365)
-+.|...|+.|+.+...+...+ . ...++..+.+|.+..|+. +++.++|+..+++|+..
T Consensus 168 ~e~a~~aYq~A~eiA~~~L~~~--p-----ThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFde 226 (268)
T 3efz_A 168 IKQAVEFYEDALQRERSFLEKY--P-----SDPLYLATILNYTILKYDLLGNPEGAMKFANRAIQA 226 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTG--G-----GCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCC--C-----CChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 3567888999887652211000 0 022345567888877774 78999999988887653
No 373
>3ph0_C ASCG; type III secretion system, chapero; 2.40A {Aeromonas hydrophila}
Probab=20.59 E-value=1.8e+02 Score=18.85 Aligned_cols=51 Identities=16% Similarity=0.014 Sum_probs=27.3
Q ss_pred hhHHHHHHHHhcCHHHHHHHHHHHHhCCCCCH-HHHHHHHHHHHHcCCHHHHH
Q 017811 236 HLNMAACLLKLKRYEEAIGQCSLVLGEDENNV-KALFRRGKARAELGQTDAAR 287 (365)
Q Consensus 236 ~~nla~~~~kl~~~~~A~~~~~~aL~~~p~n~-ka~~~~g~a~~~l~~~~~A~ 287 (365)
+..+|..---....++|....+ .|...+... -+-.-+...++..|+|++|+
T Consensus 9 LAe~AL~~TG~HcH~EA~tIA~-~L~~~~~~eE~v~mIr~~SLmNrG~Yq~Al 60 (61)
T 3ph0_C 9 LAELALAGTGHHCHQEAASIAD-WLAQEECMAECVTLIRLSSLMNQGDYQRAL 60 (61)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHH-HHHTSSTTHHHHHHHHHHHHHHC-------
T ss_pred HHHHHHHHccchHHHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHccchHhHhh
Confidence 4455555555667777765443 455565543 34556778899999999986
No 374
>1m45_B IQ2, IQ2 motif from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae}
Probab=20.42 E-value=88 Score=16.10 Aligned_cols=22 Identities=27% Similarity=0.347 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHHHHhhhccccC
Q 017811 344 IFWQLLVSLVLGLFKRKRVKAE 365 (365)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~ 365 (365)
+.+.||.+.+....-|.|+.||
T Consensus 4 qaikylqnnikgfiirqrvnde 25 (26)
T 1m45_B 4 QAIKYLQNNIKGFIIRQRVNDE 25 (26)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHhccceEEEeeecccC
Confidence 5678888888888888877664
Done!