Citrus Sinensis ID: 017812

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-----
Protein Sequence
MKELKAVIHFVCSVEFWRMALLWPVSLLTSHFQLLFQNLFPRKSNPYKRCVPPITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFINSQLACRDLSN
Secondary Structure (PSIPRED)
cHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccEEEEEcccccHHHHHHHHHHHcccEEEEEcccHHHHHHHHHHHHHHcccccEEEEEcccccHHHHHHHHHHHHHHHcccccccccEEEEEcccccccccccccccHHHHHHHccHHHHHHHHHcHHHHHcccccccEEEEccHHHccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccccEEEEEcccccccccccccccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccEccccccccccEEEEEccccHHHHHHHHHHHHHccEEEEEEccHHHHHHHHHHHHHHcccccEEEEEEcHccHHHHHHHHHHHHHHHcccccccccEEEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEcHHHHccccccEcHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEcccccEEccHHHcccHHHHHHHHHHHccHHHHccccccccEEEEEEEccccccccEEcccccccccccHHcccHHHHHHHHHHHHHHHHHHHHHHHcccc
Coil and Loop (DISEMBL)
MKELKAVIHFVCSVEFWRMALLWPVSLLTSHFQLLFQnlfprksnpykrcvppitgikrpvcivtgatsGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAgilatssrltpegydqMMSTNYIGAFFLTKLLlpllknspvpsrivNVTSFTHRNVFnaqvnnetitgkfflrskcypcariyEYSKLCLLIFSYELHRnlgldksrhvsviaadpgvvktnimrevpSFLSLMAFTVLKLLGllqspekgiNSVLdaalappetsgvyffggkgrtvnssalSFNSKLAGELWTTSCNLFINSQLACRDLSN
Flexible Loop (DISEMBL)
MKELKAVIHFVCSVEFWRMALLWPVSLLTSHFQLLFQnlfprksnpyKRCVPPITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFThrnvfnaqvnnetitgkffLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFINSQLACRDLSN
Low Complexity Region (SEG)
MKELKAVIHFVCSVEFWRMALLWPVSLLTSHFQLLFQNLFPRKSNPYKRCVPPITGIKRPVCIVtgatsglgaaaayalsREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFltklllpllkNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFINSQLACRDLSN
Disordered region (IsUnstruct)
****KAVIHFVCSVEFWRMALLWPVSLLTSHFQLLFQNLFPRKSNPYKRCVPPITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADIT****DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFINSQLAC*****
Disordered Region (DISOPRED)
****KAVIHFVCSVEFWRMALLWPVSLLTSHFQLLFQNLFPRKSNP**R***PITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFIN**********
Disordered Region (DISEMBL)
MKELKAVIHFVCSVEFWRMALLWPVSLLTSHFQLLFQNLFPRKSNPYKRCVPPITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFINSQLACRDLSN
Disordered Region (DISPRO)
MKELKAVIHFVCSVEFWRMALLWPVSLLTSHFQLLFQNLFPRKSNPYKRCVPPITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFINSQLA******
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKELKAVIHFVCSVEFWRMALLWPVSLLTSHFQLLFQNLFPRKSNPYKRCVPPITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFINSQLACRDLSN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	365	2.2.26 [Sep-21-2011]
Q8N5I4	330	Dehydrogenase/reductase S	yes	no	0.745	0.824	0.332	9e-30
A2RVM0	322	Short-chain dehydrogenase	no	no	0.676	0.767	0.340	2e-26
O74959	339	Uncharacterized oxidoredu	yes	no	0.761	0.820	0.267	9e-21
Q6RVV4	316	Short-chain dehydrogenase	N/A	no	0.742	0.857	0.303	1e-20
Q8NBN7	331	Retinol dehydrogenase 13	no	no	0.805	0.888	0.284	2e-19
Q8TC12	318	Retinol dehydrogenase 11	no	no	0.731	0.839	0.292	5e-19
Q8BYK4	316	Retinol dehydrogenase 12	yes	no	0.747	0.863	0.304	5e-19
Q91WL8	414	WW domain-containing oxid	no	no	0.663	0.584	0.313	5e-19
P59837	316	Retinol dehydrogenase 12	no	no	0.736	0.851	0.291	9e-19
Q8CEE7	334	Retinol dehydrogenase 13	no	no	0.832	0.910	0.284	2e-18

>sp|Q8N5I4|DHRSX_HUMAN Dehydrogenase/reductase SDR family member on chromosome X OS=Homo sapiens GN=DHRSX PE=2 SV=2

 Score =  131 bits (329), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 101/304 (33%), Positives = 157/304 (51%), Gaps = 32/304 (10%)

Query: 59  RP--VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQ 116
           RP  V IVTG T G+G + A  L+R G HV++ G +     + ++ I     + ++E   
Sbjct: 41  RPDRVAIVTGGTDGIGYSTAKHLARLGMHVIIAGNNDSKAKQVVSKIKEETLNDKVEFLY 100

Query: 117 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIG 176
            DL+S  S+ +F    +   +       + +LINNAG++    R T +G+++    NY+G
Sbjct: 101 CDLASMTSIRQFVQKFKMKKI------PLHVLINNAGVMMVPQRKTRDGFEEHFGLNYLG 154

Query: 177 AFFLTKLLLPLLKNSPVP---SRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCAR 233
            F LT LLL  LK S  P   +R+V V+S TH   + A++N + +       S CY    
Sbjct: 155 HFLLTNLLLDTLKESGSPGHSARVVTVSSATH---YVAELNMDDLQS-----SACYSPHA 206

Query: 234 IYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL 293
            Y  SKL L++F+Y L R L  + S HV+    DPGVV T++ + V     L      KL
Sbjct: 207 AYAQSKLALVLFTYHLQRLLAAEGS-HVTANVVDPGVVNTDVYKHVFWATRLAK----KL 261

Query: 294 LG--LLQSPEKGINSVLDAALAPPETSGV---YFFGGKGRTVNSSALSFNSKLAGELWTT 348
           LG  L ++P++G  + + AA+  PE  GV   Y +  K     S  +++N KL  +LW+ 
Sbjct: 262 LGWLLFKTPDEGAWTSIYAAVT-PELEGVGGHYLYNEK--ETKSLHVTYNQKLQQQLWSK 318

Query: 349 SCNL 352
           SC +
Sbjct: 319 SCEM 322

Homo sapiens (taxid: 9606)
EC: 1EC: .EC: 1EC: .EC: -EC: .EC: -

>sp|A2RVM0|TIC32_ARATH Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana GN=TIC32 PE=2 SV=1

 Score =  120 bits (300), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 91/267 (34%), Positives = 136/267 (50%), Gaps = 20/267 (7%)

Query: 62  CIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSS 121
            IVTGA+SG+G   A  LS  G HVV+  R++   ++   DI  +   A+L+  ++DLSS
Sbjct: 32  AIVTGASSGIGVETARVLSLRGVHVVMAVRNTDSGAKVKEDIVKQVPGAKLDVMELDLSS 91

Query: 122 FQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLT 181
            QSV KF    +   L       + LLINNAGI+A    L+ +  +   +TN++G F LT
Sbjct: 92  MQSVRKFASEYKSTGL------PLNLLINNAGIMACPFMLSKDNIELQFATNHLGHFLLT 145

Query: 182 KLLLPLLKNSPVPS----RIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEY 237
           KLLL  +K++   S    RIVN++S  HR  +   V  + I  K       Y   R Y  
Sbjct: 146 KLLLDTMKSTSRESKREGRIVNLSSEAHRFSYPEGVRFDKINDK-----SSYSSMRAYGQ 200

Query: 238 SKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLL 297
           SKLC ++ + EL + L  D   +++  +  PG + TN+ R    +L++    V K   +L
Sbjct: 201 SKLCNVLHANELTKQLKED-GVNITANSLHPGAIMTNLGRYFNPYLAVAVGAVAKY--IL 257

Query: 298 QSPEKGINSVLDAALAP--PETSGVYF 322
           +S  +G  +    AL P     SG YF
Sbjct: 258 KSVPQGAATTCYVALNPQVAGVSGEYF 284

Involved in protein precursor import into chloroplasts. Part of the redox regulon consisting of TIC32, TIC 55 and TIC62.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|O74959|YJCD_SCHPO Uncharacterized oxidoreductase C736.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC736.13 PE=3 SV=1

 Score =  101 bits (251), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 85/318 (26%), Positives = 146/318 (45%), Gaps = 40/318 (12%)

Query: 51  VPPITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDA 110
           +P +TG    V +VTG++ G+G   A  L+R+G  V L GR+     + M  I    + +
Sbjct: 37  IPDLTG---KVALVTGSSGGIGYVTALELARKGAKVYLAGRNEEKYQKVMKQIHDEVRHS 93

Query: 111 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMM 170
           ++   ++DL  F+SV +  +S             + +L+NNAGI+     LT +GY+  +
Sbjct: 94  KIRFLRLDLLDFESVYQAAESFIA------KEEKLHILVNNAGIMNPPFELTKDGYELQI 147

Query: 171 STNYIGAFFLTKLLLPLLKNS-----PVPSRIVNVTSFT-----HRNVFNAQVNNETITG 220
            TNY+  +  T+LLLP L+ +     P   RIV+V S       +  ++   +N   +  
Sbjct: 148 QTNYLSHYLFTELLLPTLRRTAEECRPGDVRIVHVASIAYLQAPYSGIYFPDLNLPHVLL 207

Query: 221 KFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP 280
             F R         Y  SK   +++S  L + L   +   +  ++  PGV++T + R  P
Sbjct: 208 GTFAR---------YGQSKYAQILYSIALAKRL---EKYGIYSVSLHPGVIRTELTRYSP 255

Query: 281 SF-LSLMAFTVLKLLGLLQSPEKGINSVLDAALAP----PETSGVYFFGGKGRTVNSSAL 335
           +F L L+  +V +   LL  P +G  + L AA +P       +G YF     R +   A 
Sbjct: 256 TFALKLLEKSVFQY--LLLDPIRGAMTSLYAATSPEISKEHLNGAYFTAIAQRGILHRA- 312

Query: 336 SFNSKLAGELWTTSCNLF 353
             +     EL+  +  +F
Sbjct: 313 -HDDAFVEELYRYTHKIF 329

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q6RVV4|TIC32_PEA Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum GN=TIC32 PE=1 SV=1

 Score =  101 bits (251), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 91/300 (30%), Positives = 145/300 (48%), Gaps = 29/300 (9%)

Query: 62  CIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSS 121
            IVTGA+SG+GA     L+  G HV++  R+     +    I      A+++A ++DLSS
Sbjct: 33  AIVTGASSGIGAETTRVLALRGAHVIMGVRNMVAAKDVKDTILKDIPSAKVDAIELDLSS 92

Query: 122 FQSVLKFKDSLQQWLLDSDMHSS---IQLLINNAGILATSSRLTPEGYDQMMSTNYIGAF 178
             SV KF          S+ +SS   + +LINNAGI+A   +L+ +  +   +TN+IG F
Sbjct: 93  LDSVKKFA---------SEFNSSGRPLNILINNAGIMACPFKLSKDNIELQFATNHIGHF 143

Query: 179 FLTKLLLPLLKNSPVPS----RIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARI 234
            LT LLL  +K +   S    RIVNV S  HR  +   +  + I  +       Y   R 
Sbjct: 144 LLTNLLLDTMKKTTRESKKEGRIVNVASEAHRFAYPEGIRFDKINDQ-----SSYNNWRA 198

Query: 235 YEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLL 294
           Y  SKL  ++ + +L ++L  D   +++  +  PG + TN+ R   +   L+   + KL 
Sbjct: 199 YGQSKLANVLHANQLTKHLKED-GVNITANSLHPGTIVTNLFRHNSAVNGLINV-IGKL- 255

Query: 295 GLLQSPEKGINSVLDAALAP--PETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNL 352
            +L++ ++G  +    AL P     SG YF         ++    +  LA +LW  S NL
Sbjct: 256 -VLKNVQQGAATTCYVALHPQVKGVSGEYF--SDSNVYKTTPHGKDVDLAKKLWDFSINL 312

Involved in protein precursor import into chloroplasts. Part of the redox regulon consisting of TIC32, TIC 55 and TIC62. Has a NADPH-dependent dehydrogenase activity, but only after preincubation with lipids.

Pisum sativum (taxid: 3888)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q8NBN7|RDH13_HUMAN Retinol dehydrogenase 13 OS=Homo sapiens GN=RDH13 PE=1 SV=2

 Score = 96.7 bits (239), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 92/323 (28%), Positives = 146/323 (45%), Gaps = 29/323 (8%)

Query: 34  LLFQNLFPRKSNPYKRCVPPITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS 93
           +L ++     + P K  +P  T       IVTGA +G+G   A  L+R G +++L  R  
Sbjct: 19  VLLKDYVTGGACPSKATIPGKT------VIVTGANTGIGKQTALELARRGGNIILACRDM 72

Query: 94  HLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAG 153
                   DI     +  + A  +DL+S +S+ +F   +       +    + +LINNAG
Sbjct: 73  EKCEAAAKDIRGETLNHHVNARHLDLASLKSIREFAAKI------IEEEERVDILINNAG 126

Query: 154 ILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV 213
           ++      T +G++     N++G F LT LLL  LK S  PSRI+N++S  H       V
Sbjct: 127 VMRCPHWTTEDGFEMQFGVNHLGHFLLTNLLLDKLKAS-APSRIINLSSLAH-------V 178

Query: 214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKT 273
                      +++ Y     Y  SKL +++F+ EL R L   +   V+V A  PGV +T
Sbjct: 179 AGHIDFDDLNWQTRKYNTKAAYCQSKLAIVLFTKELSRRL---QGSGVTVNALHPGVART 235

Query: 274 NIMREVPSFLSLMAFTVLKLLG--LLQSPEKGI--NSVLDAALAPPETSGVYFFGGKGRT 329
            + R      S  + T L  +   L++SPE     ++ L  A    + SG YF G K + 
Sbjct: 236 ELGRHTGIHGSTFSSTTLGPIFWLLVKSPELAAQPSTYLAVAEELADVSGKYFDGLKQKA 295

Query: 330 VNSSALSFNSKLAGELWTTSCNL 352
               A   + ++A  LW  S  L
Sbjct: 296 PAPEA--EDEEVARRLWAESARL 316

Does not exhibit retinol dehydrogenase (RDH) activity in vitro.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q8TC12|RDH11_HUMAN Retinol dehydrogenase 11 OS=Homo sapiens GN=RDH11 PE=1 SV=2

 Score = 95.9 bits (237), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 87/297 (29%), Positives = 140/297 (47%), Gaps = 30/297 (10%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V +VTGA +G+G   A  L++ G  V L  R          +I +   + ++   ++DLS
Sbjct: 43  VVVVTGANTGIGKETAKELAQRGARVYLACRDVEKGELVAKEIQTTTGNQQVLVRKLDLS 102

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFL 180
             +S+  F        L  + H  + +LINNAG++      T +G++  +  N++G F L
Sbjct: 103 DTKSIRAFAKGF----LAEEKH--LHVLINNAGVMMCPYSKTADGFEMHIGVNHLGHFLL 156

Query: 181 TKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKL 240
           T LLL  LK S  PSRIVNV+S  H      +++   + G+ F     Y     Y +SKL
Sbjct: 157 THLLLEKLKES-APSRIVNVSSLAHH---LGRIHFHNLQGEKF-----YNAGLAYCHSKL 207

Query: 241 CLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSP 300
             ++F+ EL R L   K   V+  +  PG V++ ++R   SF+  M +        +++P
Sbjct: 208 ANILFTQELARRL---KGSGVTTYSVHPGTVQSELVRH-SSFMRWMWWL---FSFFIKTP 260

Query: 301 EKGINSVLDAALAPPETSGVYFFGGKG----RTVNSSALSFNSKLAGELWTTSCNLF 353
           ++G  + L  AL    T G+    G           SA + N  +A  LW  SC+L 
Sbjct: 261 QQGAQTSLHCAL----TEGLEILSGNHFSDCHVAWVSAQARNETIARRLWDVSCDLL 313

Exhibits an oxidoreductive catalytic activity towards retinoids. Most efficient as an NADPH-dependent retinal reductase. Displays high activity towards 9-cis and all-trans-retinol. Also involved in the metabolism of short-chain aldehydes. No steroid dehydrogenase activity detected.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 0

EC: 0

>sp|Q8BYK4|RDH12_MOUSE Retinol dehydrogenase 12 OS=Mus musculus GN=Rdh12 PE=2 SV=1

 Score = 95.9 bits (237), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 91/299 (30%), Positives = 144/299 (48%), Gaps = 26/299 (8%)

Query: 57  IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQ 116
           I   V ++TGA +G+G   A  L+R G  V +  R         ++I +  K++++   +
Sbjct: 37  IPGKVVVITGANTGIGKETARELARRGARVYIACRDVLKGESAASEIRADTKNSQVLVRK 96

Query: 117 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIG 176
           +DLS  +S+  F +   ++L +      + +LINNAG++      T +G++     N++G
Sbjct: 97  LDLSDTKSIRAFAE---RFLAEEK---KLHILINNAGVMMCPYSKTTDGFETHFGVNHLG 150

Query: 177 AFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYE 236
            F LT LLL  LK S  P+R+VN++S  H      ++    + G+     K Y  A  Y 
Sbjct: 151 HFLLTYLLLERLKES-APARVVNLSSIAH---LIGKIRFHDLQGQ-----KRYCSAFAYG 201

Query: 237 YSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGL 296
           +SKL  L+F+ EL + L   +   V+  A  PGVV + I R   S+L  + + +      
Sbjct: 202 HSKLANLLFTRELAKRL---QGTGVTAYAVHPGVVLSEITRN--SYLLCLLWRLFS--PF 254

Query: 297 LQSPEKGINSVLDAALAP--PETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLF 353
            +S  +G  + L  ALA      SG YF   K   V+S A   N K A  LW  SC L 
Sbjct: 255 FKSTSQGAQTSLHCALAEDLEPLSGKYFSDCKRMWVSSRAR--NKKTAERLWNVSCELL 311

Exhibits an oxidoreductive catalytic activity towards retinoids. Most efficient as an NADPH-dependent retinal reductase. Displays high activity toward 9-cis and all-trans-retinol. Also involved in the metabolism of short-chain aldehydes. No steroid dehydrogenase activity detected. Might be the key enzyme in the formation of 11-cis-retinal from 11-cis-retinol during regeneration of the cone visual pigments.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q91WL8|WWOX_MOUSE WW domain-containing oxidoreductase OS=Mus musculus GN=Wwox PE=1 SV=1

 Score = 95.9 bits (237), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 85/271 (31%), Positives = 138/271 (50%), Gaps = 29/271 (10%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V +VTGA SG+G   A + +  G HV+L  R+    SE ++ I      A++EA  +DL+
Sbjct: 126 VVLVTGANSGIGFETAKSFALHGAHVILACRNLSRASEAVSRILEEWHKAKVEAMTLDLA 185

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFL 180
             +SV  F ++ +        + S+ +L+ NAG  A    LT +G +     N++G F+L
Sbjct: 186 VLRSVQHFAEAFKA------KNVSLHVLVCNAGTFALPWGLTKDGLETTFQVNHLGHFYL 239

Query: 181 TKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFL------RSKCYPCARI 234
            +LL  +L  S  P+R++ V+S +HR      +N+   +GK  L      RS  Y     
Sbjct: 240 VQLLQDVLCRSS-PARVIVVSSESHRFT---DINDS--SGKLDLSRLSPPRSD-YWAMLA 292

Query: 235 YEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG-VVKTNIMREVPSFLSLMAFTVLKL 293
           Y  SKLC ++FS ELHR L     R V+  A  PG ++ + I R   S++  + FT+ + 
Sbjct: 293 YNRSKLCNILFSNELHRRL---SPRGVTSNAVHPGNMMYSAIHRN--SWVYKLLFTLAR- 346

Query: 294 LGLLQSPEKGINSVLDAALAP--PETSGVYF 322
               +S ++G  + +  A+AP      G+YF
Sbjct: 347 -PFTKSMQQGAATTVYCAVAPELEGLGGMYF 376

Putative oxidoreductase. Acts as a tumor suppressor and plays a role in apoptosis. May function synergistically with p53/TP53 to control genotoxic stress-induced cell death. Plays a role in TGFB1 signaling and TGFB1-mediated cell death. Inhibits Wnt signaling, probably by sequestering DVL2 in the cytoplasm (By similarity). May also play a role in tumor necrosis factor (TNF)-mediated cell death. Required for normal bone development.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|P59837|RDH12_BOVIN Retinol dehydrogenase 12 OS=Bos taurus GN=RDH12 PE=2 SV=1

 Score = 94.7 bits (234), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 86/295 (29%), Positives = 142/295 (48%), Gaps = 26/295 (8%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V ++TGA +G+G   A  L+R G  V +  R         ++I +  K++++   ++DLS
Sbjct: 41  VVVITGANTGIGKETARELARRGARVYIACRDVLKGESAASEIQADTKNSQVLVRKLDLS 100

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFL 180
             +S+  F +              + +LINNAG++      T +G++  ++ N++G F L
Sbjct: 101 DTKSIRAFAEGFLA------EEKQLHILINNAGVMLCPYSKTADGFETHLAVNHLGHFLL 154

Query: 181 TKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKL 240
           T LLL  LK S  P+R+VN++S  H      ++    + G      K Y     Y +SKL
Sbjct: 155 THLLLGRLKESA-PARVVNLSSVAHH---LGKIRFHDLQG-----DKYYNLGFAYCHSKL 205

Query: 241 CLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSP 300
             ++F+ EL + L   K   V+  A  PG+V++ ++R   SFL  + + +      L++ 
Sbjct: 206 ANVLFTRELAKRL---KGTGVTTYAVHPGIVRSKLVRH--SFLLCLLWRLFS--PFLKTT 258

Query: 301 EKGINSVLDAALAP--PETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLF 353
            +G  + L  ALA      SG YF   K   V+  A   N+K A  LW  SC L 
Sbjct: 259 WEGAQTSLHCALAEGLEPLSGKYFSDCKKTWVSPRAR--NNKTAERLWNVSCELL 311

Exhibits an oxidoreductive catalytic activity towards retinoids. Most efficient as an NADPH-dependent retinal reductase. Displays high activity toward 9-cis and all-trans-retinol. Also involved in the metabolism of short-chain aldehydes. No steroid dehydrogenase activity detected. Might be the key enzyme in the formation of 11-cis-retinal from 11-cis-retinol during regeneration of the cone visual pigments.

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q8CEE7|RDH13_MOUSE Retinol dehydrogenase 13 OS=Mus musculus GN=Rdh13 PE=2 SV=1

 Score = 93.6 bits (231), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 97/341 (28%), Positives = 157/341 (46%), Gaps = 37/341 (10%)

Query: 21  LLWPVSLLTSHF--QLLFQNLFPRKSNPYKRCVPPITGIKRPVCIVTGATSGLGAAAAYA 78
            L PVS++ +     +L ++     + P K  +P  T       IVTGA +G+G   A  
Sbjct: 4   FLLPVSVVGTVIGGTVLLKDYVAGGACPSKATIPGKT------VIVTGANTGIGKQTALE 57

Query: 79  LSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD 138
           L++ G +V+L  R          DI     + R+ A ++DL+S +S+ +F   + +    
Sbjct: 58  LAKRGGNVILACRDMEKCEVAAKDIRGETLNPRVRAERLDLASLKSIREFARKVIK---- 113

Query: 139 SDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIV 198
                 + +L+NNA ++      T +G++     NY+G F LT LLL  LK S  PSRI+
Sbjct: 114 --EEERVDILVNNAAVMRCPHWTTEDGFEMQFGVNYLGHFLLTNLLLDKLKAS-APSRII 170

Query: 199 NVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKS 258
           N++S  H       ++ E +  +     K Y     Y  SKL +++F+ EL   L   + 
Sbjct: 171 NLSSLAH---VAGHIDFEDLNWQM----KKYDTKAAYCQSKLAVVLFTKELSHRL---QG 220

Query: 259 RHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLG-----LLQSPEKGI--NSVLDAA 311
             V+V A  PGV +T + R      S  AF+   +LG     L +SP+     ++ L  A
Sbjct: 221 SGVTVNALHPGVARTELGRHTGMHNS--AFSGF-MLGPFFWLLFKSPQLAAQPSTYLAVA 277

Query: 312 LAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNL 352
                 SG YF G + +  +  A   + ++A  LWT S  L
Sbjct: 278 EELENVSGKYFDGLREKAPSPEAE--DEEVARRLWTESARL 316

Does not exhibit retinol dehydrogenase (RDH) activity in vitro.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	365
359476007	467	PREDICTED: dehydrogenase/reductase SDR f	0.980	0.766	0.719	1e-139
255540331	369	short-chain dehydrogenase, putative [Ric	0.986	0.975	0.692	1e-134
296081791	369	unnamed protein product [Vitis vinifera]	0.934	0.924	0.725	1e-133
224061535	349	predicted protein [Populus trichocarpa]	0.934	0.977	0.692	1e-129
186523242	364	Rossmann-fold NAD(P)-binding domain-cont	0.980	0.983	0.621	1e-123
42567629	359	Rossmann-fold NAD(P)-binding domain-cont	0.958	0.974	0.635	1e-121
297806381	357	short-chain dehydrogenase/reductase fami	0.953	0.974	0.629	1e-121
356516031	387	PREDICTED: dehydrogenase/reductase SDR f	0.961	0.906	0.628	1e-120
356509283	377	PREDICTED: dehydrogenase/reductase SDR f	0.961	0.931	0.643	1e-118
449463521	378	PREDICTED: dehydrogenase/reductase SDR f	0.978	0.944	0.635	1e-115

>gi|359476007|ref|XP_002280887.2| PREDICTED: dehydrogenase/reductase SDR family member on chromosome X-like [Vitis vinifera]

 Score =  501 bits (1291), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 259/360 (71%), Positives = 299/360 (83%), Gaps = 2/360 (0%)

Query: 2   KELKAVIHFVCSVEFWRMALLWPVSLLTSHFQLLFQNL-FPRKSNPYKRCVPPITGIKRP 60
           KEL+ V+HFV S++F RMAL W +SL+ S+  L  Q   F RKSN Y RC P  T   RP
Sbjct: 5   KELREVLHFVFSLQFLRMALFWTLSLIISYLHLFIQRFPFSRKSNSYPRCPPANTATFRP 64

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           +CI+TGATSGLG AAAYALS+EGF+VVLVGRSSHLLS+TM +I  +NK+A L+ FQVDLS
Sbjct: 65  LCIITGATSGLGKAAAYALSKEGFYVVLVGRSSHLLSKTMVEIKEKNKNAHLKGFQVDLS 124

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFL 180
           SF S+LKFK SL+QWL DS+MHSSIQLLINNAGILATS RLT EG DQMM+TNY+GAF L
Sbjct: 125 SFHSILKFKGSLEQWLADSNMHSSIQLLINNAGILATSCRLTTEGCDQMMATNYMGAFSL 184

Query: 181 TKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKL 240
           TKLLLPLL++SPVPSRIVNV+SFTH NVF+ QV+  TITGK F R K YPCA IYEYSKL
Sbjct: 185 TKLLLPLLRSSPVPSRIVNVSSFTHLNVFDMQVDEGTITGKCFSRPKQYPCAHIYEYSKL 244

Query: 241 CLLIFSYELHRNLG-LDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQS 299
           CLL+F+YELHR LG +  SRHVSVIA DPG V+TNIMREVPS +S MAF VLKLL LLQS
Sbjct: 245 CLLLFAYELHRQLGCMHNSRHVSVIAVDPGAVETNIMREVPSCISHMAFMVLKLLFLLQS 304

Query: 300 PEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFINSQLA 359
           PE G++S+LDAALAPPE SG+YFFGGKGRTV SSALS+N+KLA +LWTTSC+LF+   LA
Sbjct: 305 PENGVSSILDAALAPPEISGLYFFGGKGRTVKSSALSYNTKLAEKLWTTSCDLFLKLCLA 364

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255540331|ref|XP_002511230.1| short-chain dehydrogenase, putative [Ricinus communis] gi|223550345|gb|EEF51832.1| short-chain dehydrogenase, putative [Ricinus communis]

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 250/361 (69%), Positives = 301/361 (83%), Gaps = 1/361 (0%)

Query: 3   ELKAVIHFVCSVEFWRMALLWPVSLLTSHFQLLFQNLFPRKSNPYKRCVPPITGIKRPVC 62
           ELK  +HF+ S+EFWRMA+ W +SL+ S+F+L FQN+F R S+PY  C PP +GI RP+C
Sbjct: 4   ELKETLHFIVSLEFWRMAIFWTISLIASYFELYFQNMFGRSSHPYPHCFPPTSGIARPLC 63

Query: 63  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 122
           ++TGATSGLG AAAYALSREGF VVL GRSS LLS+T+  I  +N+DA+++AF+VDL+SF
Sbjct: 64  VITGATSGLGEAAAYALSREGFFVVLAGRSSKLLSKTVERINKQNRDAQVKAFEVDLTSF 123

Query: 123 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTK 182
           QS++KFK SL++WLLDSDMHSSIQLLINNAGILATS RLT EGYD+MM TNY+G F LTK
Sbjct: 124 QSIIKFKGSLEKWLLDSDMHSSIQLLINNAGILATSQRLTTEGYDEMMVTNYVGLFSLTK 183

Query: 183 LLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCL 242
           LLLPLL+NSP+ SRIVNVTSFTHR+VFN QV+ ET++GK F   K YP A IYEYSKLC+
Sbjct: 184 LLLPLLRNSPIESRIVNVTSFTHRSVFNVQVDKETVSGKCFSTYKFYPYAHIYEYSKLCI 243

Query: 243 LIFSYELHRNLGL-DKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPE 301
           L+FSYELHR L L D+S HVSV AADPGVVKTNIMREVP  LS +AF VLKLLGLLQ P+
Sbjct: 244 LLFSYELHRQLRLMDESCHVSVNAADPGVVKTNIMREVPFCLSSVAFIVLKLLGLLQLPD 303

Query: 302 KGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFINSQLACR 361
            G++S+LDAALAPPETS VYFFGGKGR + SSALS +  LA +LWTTSC++F N +L  +
Sbjct: 304 NGVSSILDAALAPPETSAVYFFGGKGRILKSSALSRDISLAEKLWTTSCDIFENLKLNSK 363

Query: 362 D 362
           +
Sbjct: 364 E 364

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296081791|emb|CBI20796.3| unnamed protein product [Vitis vinifera]

 Score =  481 bits (1237), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 249/343 (72%), Positives = 285/343 (83%), Gaps = 2/343 (0%)

Query: 19  MALLWPVSLLTSHFQLLFQNL-FPRKSNPYKRCVPPITGIKRPVCIVTGATSGLGAAAAY 77
           MAL W +SL+ S+  L  Q   F RKSN Y RC P  T   RP+CI+TGATSGLG AAAY
Sbjct: 1   MALFWTLSLIISYLHLFIQRFPFSRKSNSYPRCPPANTATFRPLCIITGATSGLGKAAAY 60

Query: 78  ALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL 137
           ALS+EGF+VVLVGRSSHLLS+TM +I  +NK+A L+ FQVDLSSF S+LKFK SL+QWL 
Sbjct: 61  ALSKEGFYVVLVGRSSHLLSKTMVEIKEKNKNAHLKGFQVDLSSFHSILKFKGSLEQWLA 120

Query: 138 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRI 197
           DS+MHSSIQLLINNAGILATS RLT EG DQMM+TNY+GAF LTKLLLPLL++SPVPSRI
Sbjct: 121 DSNMHSSIQLLINNAGILATSCRLTTEGCDQMMATNYMGAFSLTKLLLPLLRSSPVPSRI 180

Query: 198 VNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLG-LD 256
           VNV+SFTH NVF+ QV+  TITGK F R K YPCA IYEYSKLCLL+F+YELHR LG + 
Sbjct: 181 VNVSSFTHLNVFDMQVDEGTITGKCFSRPKQYPCAHIYEYSKLCLLLFAYELHRQLGCMH 240

Query: 257 KSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPE 316
            SRHVSVIA DPG V+TNIMREVPS +S MAF VLKLL LLQSPE G++S+LDAALAPPE
Sbjct: 241 NSRHVSVIAVDPGAVETNIMREVPSCISHMAFMVLKLLFLLQSPENGVSSILDAALAPPE 300

Query: 317 TSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFINSQLA 359
            SG+YFFGGKGRTV SSALS+N+KLA +LWTTSC+LF+   LA
Sbjct: 301 ISGLYFFGGKGRTVKSSALSYNTKLAEKLWTTSCDLFLKLCLA 343

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224061535|ref|XP_002300528.1| predicted protein [Populus trichocarpa] gi|222847786|gb|EEE85333.1| predicted protein [Populus trichocarpa]

 Score =  467 bits (1202), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 237/342 (69%), Positives = 283/342 (82%), Gaps = 1/342 (0%)

Query: 19  MALLWPVSLLTSHFQLLFQNLFPRKSNPYKRCVPPITGIKRPVCIVTGATSGLGAAAAYA 78
           M + W +SL+ S+FQL +Q +F +K N Y RC P   G K+P+C++TGATSG+GAAAAY 
Sbjct: 1   MGIFWTLSLVMSYFQLFWQRVFTKKPNAYPRCPPQRIGTKKPICVITGATSGIGAAAAYD 60

Query: 79  LSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD 138
           LS+EGF+VVLVGRSS LLS+ +  I  +NKDA +EAF+VDLSSFQS+LKFKDSL++WLLD
Sbjct: 61  LSKEGFYVVLVGRSSQLLSKMIEWIHKKNKDACVEAFEVDLSSFQSILKFKDSLEKWLLD 120

Query: 139 SDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIV 198
           SDMH S+QLLINNAGILA S RLT EGYDQMM TNYIGAF LTKLLLPLLKNSP+ SRIV
Sbjct: 121 SDMHVSVQLLINNAGILAASHRLTEEGYDQMMGTNYIGAFSLTKLLLPLLKNSPIGSRIV 180

Query: 199 NVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNL-GLDK 257
           NVTSFTHRN+FN Q++ ET+ GK   RSK YP + IYE+SKLCLL+FSYELHR L   D+
Sbjct: 181 NVTSFTHRNLFNVQIDKETVVGKCLSRSKQYPFSHIYEFSKLCLLMFSYELHRQLHSTDE 240

Query: 258 SRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPET 317
           S  VSVIAADPG V+TNIMRE+PS++S M F  L LLGLLQSPE+G +SV+DAALAPPE 
Sbjct: 241 SCKVSVIAADPGAVETNIMRELPSYISRMTFIALNLLGLLQSPEEGASSVIDAALAPPEI 300

Query: 318 SGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFINSQLA 359
           SGVYFFGGKGRT+NSSALS N +LA +LW +S +LF+ S+LA
Sbjct: 301 SGVYFFGGKGRTLNSSALSHNIRLAEKLWRSSSDLFLESKLA 342

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|186523242|ref|NP_197098.2| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] gi|332004843|gb|AED92226.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana]

 Score =  447 bits (1150), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 223/359 (62%), Positives = 285/359 (79%), Gaps = 1/359 (0%)

Query: 1   MKELKAVIHFVCSVEFWRMALLWPVSLLTSHFQLLFQNLFPRKSNPYKRCVPPITGIKRP 60
           M+E+K V+ FVCS EFWRM L W ++L++S+FQLL   +F  KS      + P  G  RP
Sbjct: 1   MREVKEVLCFVCSSEFWRMVLFWNIALVSSYFQLLKARIFGSKSTSISGSINPQNGSSRP 60

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           +C++TGATSGLG A A+AL+ +GF+VVLVGRSS LLSET+ +I ++NKDA+L++F+ D+S
Sbjct: 61  ICVITGATSGLGKATAFALAEKGFYVVLVGRSSQLLSETLKEIKNKNKDAQLKSFEADMS 120

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFL 180
           SF+S+  FK+SL+QWL DS +H SIQ+L+NNAGILATSSR T +GYD+M++TNY+G FFL
Sbjct: 121 SFESIFTFKNSLEQWLSDSALHPSIQVLVNNAGILATSSRPTIDGYDRMIATNYVGPFFL 180

Query: 181 TKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKL 240
           TKLLLPLLKNS VPSR+VNVTSFTH + F  +++ +++TG  F  S  YPCARIYEYSKL
Sbjct: 181 TKLLLPLLKNSNVPSRVVNVTSFTHHSAFIQKLDKDSVTGVCFSTSNQYPCARIYEYSKL 240

Query: 241 CLLIFSYELHRNLGL-DKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQS 299
           CLL+FSYELHR L L D S HVSVIAADPG VKTNIMRE+P +++ M F   K+LGLLQS
Sbjct: 241 CLLLFSYELHRQLRLIDDSSHVSVIAADPGFVKTNIMRELPCYITSMVFLGFKILGLLQS 300

Query: 300 PEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFINSQL 358
           PE G  S++DAAL+ PETSG Y+FGGKGRT+ SS +S + KLA +LW TSC+LF + QL
Sbjct: 301 PEDGAESIIDAALSTPETSGAYYFGGKGRTIESSQVSRDPKLAKQLWETSCDLFNDLQL 359

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|42567629|ref|NP_196027.3| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] gi|44681364|gb|AAS47622.1| At5g04070 [Arabidopsis thaliana] gi|45773892|gb|AAS76750.1| At5g04070 [Arabidopsis thaliana] gi|332003310|gb|AED90693.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana]

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 225/354 (63%), Positives = 283/354 (79%), Gaps = 4/354 (1%)

Query: 1   MKELKAVIHFVCSVEFWRMALLWPVSLLTSHFQLLFQNLFPRKSNPYKRCVPPITGIKRP 60
           M+ LK  + F+CS  FWRM L W ++LL S+FQLL +++F  KS+    C         P
Sbjct: 1   MENLKEALRFICSSNFWRMVLFWNIALLFSYFQLLKKSIFAPKSSSSSSCSK-FNHSHTP 59

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           VC++TGATSGLG A A+ALSR+GF+VVLVGRSSHLLS+T++DI  +N+DA+L+AF+VD+S
Sbjct: 60  VCVITGATSGLGKATAFALSRKGFYVVLVGRSSHLLSKTLSDIKRQNEDAKLKAFEVDMS 119

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFL 180
           SFQ VLKF+ SL+QWL +SD+HSS+QLL+NNAGILATSSR T EG+D+M++TNY+GAF L
Sbjct: 120 SFQLVLKFRSSLEQWLFESDLHSSVQLLVNNAGILATSSRPTVEGFDRMIATNYVGAFSL 179

Query: 181 TKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKL 240
           TKLLLPLL+NSPVPSR+VNVTSFTHR+ F  + + +++TG  F RSK YPCARIYEYSKL
Sbjct: 180 TKLLLPLLRNSPVPSRVVNVTSFTHRSAFTGRFDMDSVTGVNFSRSKQYPCARIYEYSKL 239

Query: 241 CLLIFSYELHRNLGL-DKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQS 299
           CLL+FSYELHR L L D S H+SV+A DPG VKTNIM E+PS++ ++AF  LK+LGL+QS
Sbjct: 240 CLLLFSYELHRQLHLMDDSHHISVVAVDPGAVKTNIMHELPSYIQVIAFCGLKILGLMQS 299

Query: 300 PEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLF 353
           PE    SV+DAALAPPE SG YFFG  GRT+ SS LS + K+A ELW TSC +F
Sbjct: 300 PEDAAESVIDAALAPPEISGKYFFG--GRTIESSTLSSDPKMAKELWDTSCLIF 351

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297806381|ref|XP_002871074.1| short-chain dehydrogenase/reductase family protein [Arabidopsis lyrata subsp. lyrata] gi|297316911|gb|EFH47333.1| short-chain dehydrogenase/reductase family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  440 bits (1131), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 221/351 (62%), Positives = 282/351 (80%), Gaps = 3/351 (0%)

Query: 4   LKAVIHFVCSVEFWRMALLWPVSLLTSHFQLLFQNLFPRKSNPYKRCVPPITGIKRPVCI 63
           +K  + F+CS  FWRMAL W ++LL S+FQLL +++    S               P+C+
Sbjct: 1   MKEALRFICSSNFWRMALFWNIALLFSYFQLLKKSI--FGSKSSSSSCSKSNHSHTPICV 58

Query: 64  VTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQ 123
           +TGATSGLG A A+ALSR+GF+VVLVGRSSHLLS+T++DI  +N++A+L+AF+VD+SSFQ
Sbjct: 59  ITGATSGLGKATAFALSRKGFYVVLVGRSSHLLSKTLSDIKRQNENAQLKAFEVDISSFQ 118

Query: 124 SVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKL 183
           SV KF++SL+QWL +SD+HSS+QLL+NNAGILATS R T EG+D+MM+TNY+GAF LTKL
Sbjct: 119 SVFKFRNSLEQWLFESDLHSSVQLLVNNAGILATSCRPTVEGFDRMMATNYVGAFTLTKL 178

Query: 184 LLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLL 243
           LLPLL+NSPVPSR+VNVTSFTHR+ F+ + + +++TG  F RSK YPCARIYEYSKLCLL
Sbjct: 179 LLPLLRNSPVPSRVVNVTSFTHRSAFSGRFDMDSVTGVNFSRSKQYPCARIYEYSKLCLL 238

Query: 244 IFSYELHRNLGL-DKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEK 302
           +FSY+LHR L L D S HVSV+A DPG VKTNIM E+PS++ ++AF  LK+LGL+QSPE 
Sbjct: 239 LFSYQLHRQLRLTDDSHHVSVVAVDPGAVKTNIMHELPSYIQVIAFYGLKILGLMQSPED 298

Query: 303 GINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLF 353
              SV+DAALAPPE SG YFFGG+GRT+ SSALS + K+A ELW TSC +F
Sbjct: 299 AAESVIDAALAPPEISGKYFFGGQGRTIESSALSGDPKMAKELWDTSCLIF 349

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356516031|ref|XP_003526700.1| PREDICTED: dehydrogenase/reductase SDR family member on chromosome X-like [Glycine max]

 Score =  436 bits (1122), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 232/369 (62%), Positives = 277/369 (75%), Gaps = 18/369 (4%)

Query: 1   MKELKAVIHFVCSVEFWRMALLWPVSLLTSHFQLL---------FQNLFPRKSN------ 45
           +KEL     F+CS++FWRMALLW  S+L S++QL          F+ L P K +      
Sbjct: 7   VKELWRAFFFLCSLQFWRMALLWTFSILYSYYQLFKDSLSHSQYFKPLIPEKCSLFSQKL 66

Query: 46  -PYKRCVPPITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADIT 104
             Y RC  P T   RPVC++TGATSGLG AAAY LS+EG+ VVLVGRS  LLSET+  I 
Sbjct: 67  VSYPRC-SPFTTTFRPVCVITGATSGLGLAAAYELSKEGYVVVLVGRSQQLLSETITKIK 125

Query: 105 SRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPE 164
            RN+ A LEAFQVDLSS +SV+KFK SLQQW LDSD+H SIQ+LINNAGILATS R+TPE
Sbjct: 126 DRNEHAHLEAFQVDLSSIESVVKFKTSLQQWFLDSDLHCSIQILINNAGILATSPRVTPE 185

Query: 165 GYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFL 224
           GYDQM+ TNYIGAF LTKLLLPLL++SPV S+IVNVTSFTHR V + QV+  T++G+ F 
Sbjct: 186 GYDQMIGTNYIGAFALTKLLLPLLESSPVSSKIVNVTSFTHRAVTDVQVDEGTVSGERFF 245

Query: 225 RSKCYPCARIYEYSKLCLLIFSYELHRNLGL-DKSRHVSVIAADPGVVKTNIMREVPSFL 283
           RS  YPCA IYEYSKLCL++FSYELHR L L  KS  + V  ADPGVV+TN+MRE+P+ L
Sbjct: 246 RSIQYPCAHIYEYSKLCLILFSYELHRQLCLMGKSHQIFVTVADPGVVQTNLMREIPAIL 305

Query: 284 SLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAG 343
           S +A  VLK L LLQSPE G++S++DAALAPP TSG YFFGG GRT+N S LS N+KLA 
Sbjct: 306 SWLAIYVLKRLRLLQSPECGVDSIVDAALAPPGTSGAYFFGGNGRTINPSTLSRNAKLAR 365

Query: 344 ELWTTSCNL 352
           ELW ++  L
Sbjct: 366 ELWESTSKL 374

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356509283|ref|XP_003523380.1| PREDICTED: dehydrogenase/reductase SDR family member on chromosome X-like [Glycine max]

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 231/359 (64%), Positives = 274/359 (76%), Gaps = 8/359 (2%)

Query: 1   MKELKAVIHFVCSVEFWRMALLWPVSLLTSHFQLLFQ------NLFPRKSNPYKRCVPPI 54
           +KEL     F+CS +FWRMALLW  S+L S++QL         +LF  K   Y RC P  
Sbjct: 7   VKELWRAFFFLCSPQFWRMALLWTFSILYSYYQLFKPLIHEKCSLFSHKLVSYPRCSPFT 66

Query: 55  TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEA 114
           T  K PVC++TGATSGLG AAAY LS+EG+ VVLVGRS  LLSET+  I   N+DA LEA
Sbjct: 67  TTFK-PVCVITGATSGLGLAAAYQLSKEGYFVVLVGRSQQLLSETITKIKDWNEDAHLEA 125

Query: 115 FQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNY 174
           FQVDLSS +SV+KFK SLQQWLLDSD+H SIQ+LINNAGILATS R+T EGYDQM+ TNY
Sbjct: 126 FQVDLSSIESVVKFKMSLQQWLLDSDLHCSIQILINNAGILATSPRVTAEGYDQMIGTNY 185

Query: 175 IGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARI 234
           IGAF LTKLLLPLL++SPV S+IVNV+SFTHR V + QV+  T++GK F RS  YPCA I
Sbjct: 186 IGAFALTKLLLPLLESSPVSSKIVNVSSFTHRAVTDVQVDEGTVSGKRFFRSIQYPCAHI 245

Query: 235 YEYSKLCLLIFSYELHRNLGL-DKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL 293
           YEYSKLCL++FSYELHR L L  KS  + V  ADPGVV+T +M+EVP+ LS +A  VLK 
Sbjct: 246 YEYSKLCLILFSYELHRQLCLMGKSHQIFVTVADPGVVQTKLMQEVPAILSWLALYVLKR 305

Query: 294 LGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNL 352
           L LLQSPE G++S++DAALAPP TSG YFFGGKGRT+N S LS N+KLA ELW ++  L
Sbjct: 306 LQLLQSPECGVDSIIDAALAPPGTSGAYFFGGKGRTLNPSPLSRNAKLARELWESTSKL 364

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449463521|ref|XP_004149482.1| PREDICTED: dehydrogenase/reductase SDR family member on chromosome X-like [Cucumis sativus]

 Score =  420 bits (1079), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 232/365 (63%), Positives = 279/365 (76%), Gaps = 8/365 (2%)

Query: 3   ELKAVIHFVCSVEFWRMALLWPVSLLTSHFQLLFQNLFPRKSN-------PYKRCVPPIT 55
           ELK    F+ S EFWRMA+LW +S+L S+  L  Q       N        Y+R  P  +
Sbjct: 7   ELKKAWQFINSTEFWRMAVLWNLSILYSYLLLFSQRFLSFSINQRSEMYYSYERDSPCTS 66

Query: 56  GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAF 115
               P+CI+TGATSGLGAAAA ALS+ GF+VVL GRS HLL +TM++I  +N+ A L+AF
Sbjct: 67  EAVMPLCIITGATSGLGAAAALALSKRGFYVVLAGRSRHLLLKTMSEIKRQNEKALLKAF 126

Query: 116 QVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYI 175
           QVDL S QS+L FK+SLQ WL DS MH S+QLLINNAGILATSSRLT EGYDQMM+TNY+
Sbjct: 127 QVDLLSIQSILDFKNSLQLWLQDSKMHPSVQLLINNAGILATSSRLTSEGYDQMMATNYV 186

Query: 176 GAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIY 235
           G FFLT++LLPLLKNSP PSRIVNV+SFTHR VF+  V+ +T+ GK F     YPC+ IY
Sbjct: 187 GPFFLTQMLLPLLKNSPFPSRIVNVSSFTHRCVFDVHVDEDTVCGKGFWGLDQYPCSSIY 246

Query: 236 EYSKLCLLIFSYELHRNLGLDKSRH-VSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLL 294
           +YSKLCLL+FSYELHR L LDK  H ++V  ADPGVVKTNIMREVP++LS +AFT+L+LL
Sbjct: 247 QYSKLCLLLFSYELHRKLSLDKESHKLTVNVADPGVVKTNIMREVPTYLSRVAFTILRLL 306

Query: 295 GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFI 354
            LLQ P+ G+NS+LDAALA PETSGVYFFGGKGR V SSA S ++KLA ELW TS NLF+
Sbjct: 307 RLLQLPKDGVNSILDAALASPETSGVYFFGGKGRRVGSSAQSNDAKLAEELWETSSNLFV 366

Query: 355 NSQLA 359
            SQ++
Sbjct: 367 KSQIS 371

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	365
TAIR|locus:2150680	359	AT5G04070 [Arabidopsis thalian	0.958	0.974	0.573	1.9e-106
TAIR|locus:2146127	364	AT5G15940 [Arabidopsis thalian	0.980	0.983	0.559	3.1e-106
UNIPROTKB|Q8N5I4	330	DHRSX "Dehydrogenase/reductase	0.745	0.824	0.289	2.2e-25
UNIPROTKB|O53726	311	Rv0439c "PROBABLE DEHYDROGENAS	0.682	0.800	0.330	8.7e-24
UNIPROTKB|E1BYJ6	266	DHRSX "Uncharacterized protein	0.682	0.936	0.289	2.6e-22
UNIPROTKB|F1Q0B4	268	DHRSX "Uncharacterized protein	0.676	0.921	0.28	2.6e-22
FB|FBgn0033205	330	CG2064 [Drosophila melanogaste	0.676	0.748	0.32	3.4e-22
UNIPROTKB|O53613	303	Rv0068 "PROBABLE OXIDOREDUCTAS	0.676	0.815	0.323	9e-22
UNIPROTKB|F1P604	329	DHRS13 "Uncharacterized protei	0.769	0.854	0.299	3e-21
ZFIN|ZDB-GENE-060620-2	324	dhrsx "dehydrogenase/reductase	0.682	0.768	0.285	3.9e-21

TAIR|locus:2150680 AT5G04070 [Arabidopsis thaliana (taxid:3702)]

 Score = 1053 (375.7 bits), Expect = 1.9e-106, P = 1.9e-106
 Identities = 203/354 (57%), Positives = 259/354 (73%)

Query:     1 MKELKAVIHFVCSVEFWRMALLWPVSLLTSHFQLLFQNLFPRKSNPYKRCVPPITGIKRP 60
             M+ LK  + F+CS  FWRM L W ++LL S+FQLL +++F  KS+    C         P
Sbjct:     1 MENLKEALRFICSSNFWRMVLFWNIALLFSYFQLLKKSIFAPKSSSSSSC-SKFNHSHTP 59

Query:    61 VCIVXXXXXXXXXXXXXXXXREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
             VC++                R+GF+VVLVGRSSHLLS+T++DI  +N+DA+L+AF+VD+S
Sbjct:    60 VCVITGATSGLGKATAFALSRKGFYVVLVGRSSHLLSKTLSDIKRQNEDAKLKAFEVDMS 119

Query:   121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFX 180
             SFQ VLKF+ SL+QWL +SD+HSS+QLL+NNAGILATSSR T EG+D+M++TNY+GAF  
Sbjct:   120 SFQLVLKFRSSLEQWLFESDLHSSVQLLVNNAGILATSSRPTVEGFDRMIATNYVGAFSL 179

Query:   181 XXXXXXXXXNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKL 240
                      NSPVPSR+VNVTSFTHR+ F  + + +++TG  F RSK YPCARIYEYSKL
Sbjct:   180 TKLLLPLLRNSPVPSRVVNVTSFTHRSAFTGRFDMDSVTGVNFSRSKQYPCARIYEYSKL 239

Query:   241 CLLIFSYELHRNLGL-DKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQS 299
             CLL+FSYELHR L L D S H+SV+A DPG VKTNIM E+PS++ ++AF  LK+LGL+QS
Sbjct:   240 CLLLFSYELHRQLHLMDDSHHISVVAVDPGAVKTNIMHELPSYIQVIAFCGLKILGLMQS 299

Query:   300 PEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLF 353
             PE    SV+DAALAPPE SG YFFGG  RT+ SS LS + K+A ELW TSC +F
Sbjct:   300 PEDAAESVIDAALAPPEISGKYFFGG--RTIESSTLSSDPKMAKELWDTSCLIF 351

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2146127 AT5G15940 [Arabidopsis thaliana (taxid:3702)]

 Score = 1051 (375.0 bits), Expect = 3.1e-106, P = 3.1e-106
 Identities = 201/359 (55%), Positives = 261/359 (72%)

Query:     1 MKELKAVIHFVCSVEFWRMALLWPVSLLTSHFQLLFQNLFPRKSNPYKRCVPPITGIKRP 60
             M+E+K V+ FVCS EFWRM L W ++L++S+FQLL   +F  KS      + P  G  RP
Sbjct:     1 MREVKEVLCFVCSSEFWRMVLFWNIALVSSYFQLLKARIFGSKSTSISGSINPQNGSSRP 60

Query:    61 VCIVXXXXXXXXXXXXXXXXREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
             +C++                 +GF+VVLVGRSS LLSET+ +I ++NKDA+L++F+ D+S
Sbjct:    61 ICVITGATSGLGKATAFALAEKGFYVVLVGRSSQLLSETLKEIKNKNKDAQLKSFEADMS 120

Query:   121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFX 180
             SF+S+  FK+SL+QWL DS +H SIQ+L+NNAGILATSSR T +GYD+M++TNY+G FF 
Sbjct:   121 SFESIFTFKNSLEQWLSDSALHPSIQVLVNNAGILATSSRPTIDGYDRMIATNYVGPFFL 180

Query:   181 XXXXXXXXXNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKL 240
                      NS VPSR+VNVTSFTH + F  +++ +++TG  F  S  YPCARIYEYSKL
Sbjct:   181 TKLLLPLLKNSNVPSRVVNVTSFTHHSAFIQKLDKDSVTGVCFSTSNQYPCARIYEYSKL 240

Query:   241 CLLIFSYELHRNLGL-DKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQS 299
             CLL+FSYELHR L L D S HVSVIAADPG VKTNIMRE+P +++ M F   K+LGLLQS
Sbjct:   241 CLLLFSYELHRQLRLIDDSSHVSVIAADPGFVKTNIMRELPCYITSMVFLGFKILGLLQS 300

Query:   300 PEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFINSQL 358
             PE G  S++DAAL+ PETSG Y+FGGKGRT+ SS +S + KLA +LW TSC+LF + QL
Sbjct:   301 PEDGAESIIDAALSTPETSGAYYFGGKGRTIESSQVSRDPKLAKQLWETSCDLFNDLQL 359

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

UNIPROTKB|Q8N5I4 DHRSX "Dehydrogenase/reductase SDR family member on chromosome X" [Homo sapiens (taxid:9606)]

 Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
 Identities = 88/304 (28%), Positives = 146/304 (48%)

Query:    59 RP--VCIVXXXXXXXXXXXXXXXXREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQ 116
             RP  V IV                R G HV++ G +     + ++ I     + ++E   
Sbjct:    41 RPDRVAIVTGGTDGIGYSTAKHLARLGMHVIIAGNNDSKAKQVVSKIKEETLNDKVEFLY 100

Query:   117 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIG 176
              DL+S  S+ +F   +Q++ +       + +LINNAG++    R T +G+++    NY+G
Sbjct:   101 CDLASMTSIRQF---VQKFKMKK---IPLHVLINNAGVMMVPQRKTRDGFEEHFGLNYLG 154

Query:   177 AFFXXXXXXXXXXNSPVP---SRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCAR 233
              F            S  P   +R+V V+S TH   + A++N + +       S CY    
Sbjct:   155 HFLLTNLLLDTLKESGSPGHSARVVTVSSATH---YVAELNMDDLQS-----SACYSPHA 206

Query:   234 IYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL 293
              Y  SKL L++F+Y L R L  + S HV+    DPGVV T++ + V  + + +A    KL
Sbjct:   207 AYAQSKLALVLFTYHLQRLLAAEGS-HVTANVVDPGVVNTDVYKHV-FWATRLA---KKL 261

Query:   294 LG--LLQSPEKGINSVLDAALAPPETSGV---YFFGGKGRTVNSSALSFNSKLAGELWTT 348
             LG  L ++P++G  + + AA+ P E  GV   Y +  K     S  +++N KL  +LW+ 
Sbjct:   262 LGWLLFKTPDEGAWTSIYAAVTP-ELEGVGGHYLYNEK--ETKSLHVTYNQKLQQQLWSK 318

Query:   349 SCNL 352
             SC +
Sbjct:   319 SCEM 322

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

UNIPROTKB|O53726 Rv0439c "PROBABLE DEHYDROGENASE/REDUCTASE" [Mycobacterium tuberculosis H37Rv (taxid:83332)]

 Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
 Identities = 91/275 (33%), Positives = 131/275 (47%)

Query:    83 GFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMH 142
             G HVVL  R+    +   A I +    A +   Q+DL S  SV    D+L+        +
Sbjct:    45 GAHVVLAVRNLEKGNAARARIMAARPGAHVTLQQLDLCSLDSVRAAADALRT------AY 98

Query:   143 SSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFXXXXXXXXXXNSPVP-SRIVNVT 201
               I +LINNAG++ T  ++T +G++    TN++G F             PVP SR+V V+
Sbjct:    99 PRIDVLINNAGVMWTPKQVTKDGFELQFGTNHLGHFALTGLVLDHML--PVPGSRVVTVS 156

Query:   202 SFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHV 261
             S  HR   +A ++ + +  +     + Y     Y  +KL  L+F+YEL R LG +  +  
Sbjct:   157 SQGHR--IHAAIHFDDLQWE-----RRYNRVAAYGQAKLANLLFTYELQRRLG-EAGKST 208

Query:   262 SVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVY 321
               +AA PG   T + R +P  +  +A TVL  L L QSPE G    L AA  P    G Y
Sbjct:   209 IAVAAHPGGSNTELTRNLPRLIRPVA-TVLGPL-LFQSPEMGALPTLRAATDPTTQGGQY 266

Query:   322 F----FG---GKGRTVNSSALSFNSKLAGELWTTS 349
             +    FG   G  + V SSA S +  L   LWT S
Sbjct:   267 YGPDGFGEQRGHPKVVQSSAQSHDKDLQRRLWTVS 301

GO:0005886 "plasma membrane" evidence=IDA

UNIPROTKB|E1BYJ6 DHRSX "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
 Identities = 79/273 (28%), Positives = 133/273 (48%)

Query:    85 HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSS 144
             HV++ G S     E +  I       ++E    DL+S +S+ +F   +QQ+   +     
Sbjct:     2 HVIIAGNSEREGQEAVRKIKEETLTGKVEFLYCDLASMKSIRQF---VQQFRAKN---CP 55

Query:   145 IQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFXXXXXXXXXXNSPVPS---RIVNVT 201
             + +L+NNAG++    R T +G++     NY+G F            S   S   RIV V+
Sbjct:    56 LHVLVNNAGVMLVPERQTEDGFEVHFGLNYLGHFLLTNLLLDTLKQSGTHSHSARIVTVS 115

Query:   202 SFTHRNVFNAQVNNETITGKFFLRSKC-YPCARIYEYSKLCLLIFSYELHRNLGLDKSRH 260
             S TH  V    +++        L+S+C Y     Y  SKL L++F+Y L   L  + S H
Sbjct:   116 SATHY-VGKLHLDD--------LQSRCSYSPHGAYAQSKLALVLFTYRLQHLLTANGS-H 165

Query:   261 VSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPP-ETSG 319
             V+    DPGVV T + + V  F  +  F  +    L ++PE+G ++ + AA++P  E +G
Sbjct:   166 VTANVVDPGVVNTELYKHV--FWVVKVFKWMTAWLLFKTPEEGASTTIYAAVSPEIEGAG 223

Query:   320 VYFFGGKGRTVNSSALSFNSKLAGELWTTSCNL 352
               +   + RT  S+ ++++ +L   LWT SC +
Sbjct:   224 GCYLYNEERT-KSADVAYDEELQRRLWTESCKM 255

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

UNIPROTKB|F1Q0B4 DHRSX "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
 Identities = 77/275 (28%), Positives = 130/275 (47%)

Query:    85 HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSS 144
             HV+L G +     + +  I     + ++E    DL+S +S+ +F    ++  +   +H  
Sbjct:     2 HVILAGNNDSSAPDVVRKIQEETLNDKVEFLYCDLASLRSIRQFVQKFKKKKIP--LH-- 57

Query:   145 IQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFXXXXXXXXXXNSPVP---SRIVNVT 201
               +L+NNAG++    R T +G+++    NY+G F            S  P   +R+V V+
Sbjct:    58 --VLVNNAGVMMVPERTTEDGFEEHFGLNYLGHFLLTNLLLDTLKESGAPGRCARVVTVS 115

Query:   202 SFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHV 261
             S TH   +  +++ + + G     S+CY     Y  SKL L++F+Y L R L    S  V
Sbjct:   116 SATH---YIGELDMDDLQG-----SRCYSPHAAYAQSKLALVLFTYHLQRLLAAQGSP-V 166

Query:   262 SVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLG--LLQSPEKGINSVLDAALAPP--ET 317
             +    DPGVV TN+ R V  F       + KL G    ++P++G  + + AA+ P     
Sbjct:   167 TANVVDPGVVNTNLYRHV--FWGTRL--IKKLFGWWFFKTPDEGAWTSVYAAVTPDLEGL 222

Query:   318 SGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNL 352
              G Y +  K     S A++++  L  ELW  SC +
Sbjct:   223 GGRYLYNEK--ETKSLAVTYDLDLQTELWARSCQM 255

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

FB|FBgn0033205 CG2064 [Drosophila melanogaster (taxid:7227)]

 Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
 Identities = 88/275 (32%), Positives = 130/275 (47%)

Query:    81 REGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD 140
             R G  V L  R  +   +   DI     +  + + ++DLSS  S+ KF D  ++      
Sbjct:    65 RRGGTVYLACRDMNRCEKARKDIIKETNNQNIFSRELDLSSLDSIRKFVDGFKK------ 118

Query:   141 MHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFXXXXXXXXXXNSPVPSRIVNV 200
                 + +LINNAG++     LT +GY+  +  N+IG F           NS  PSRIV V
Sbjct:   119 EQPKLHVLINNAGVMRCPKTLTKDGYELQLGVNHIGHFLLTNLLLDVLKNS-APSRIVVV 177

Query:   201 TSFTH-RNVFN-AQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKS 258
             +S  H R   N A +N+E          K Y     Y  SKL  ++F+ EL + L   + 
Sbjct:   178 SSLAHARGSINVADLNSE----------KSYDEGLAYSQSKLANVLFTRELAKRL---EG 224

Query:   259 RHVSVIAADPGVVKTNIMREVPSF-LSLMAFTVLKLLG-LLQSPEKGINSVLDAALAPP- 315
               V+V A  PGVV T + R    F  +L+ F +  ++  LL++P+ G  + + AAL P  
Sbjct:   225 SGVTVNALHPGVVDTELARNWAFFQTNLVKFFLKPMIWPLLKTPKSGAQTSIYAALDPEL 284

Query:   316 -ETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTS 349
                SG+YF   K + V S AL  + K+A  LW  S
Sbjct:   285 KNISGLYFSDCKPKPVASGAL--DDKVAKFLWAES 317

GO:0008152 "metabolic process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

UNIPROTKB|O53613 Rv0068 "PROBABLE OXIDOREDUCTASE" [Mycobacterium tuberculosis H37Rv (taxid:83332)]

 Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
 Identities = 89/275 (32%), Positives = 129/275 (46%)

Query:    83 GFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMH 142
             G HVVL  R+     +  A IT     A +E  ++DL+S  SV   + +  Q  L SD H
Sbjct:    38 GAHVVLAVRNLDKGKQAAARITEATPGAEVELQELDLTSLASV---RAAAAQ--LKSD-H 91

Query:   143 SSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFXXXXXXXXXXNSPVP-SRIVNVT 201
               I LLINNAG++ T  + T +G++    TN++G F             PV  SR+V ++
Sbjct:    92 QRIDLLINNAGVMYTPRQTTADGFEMQFGTNHLGHFALTGLLIDRLL--PVAGSRVVTIS 149

Query:   202 SFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHV 261
             S  HR    A ++ + +  +     + Y     Y  +KL  L+F+YEL R L    +   
Sbjct:   150 SVGHR--IRAAIHFDDLQWE-----RRYRRVAAYGQAKLANLLFTYELQRRLAPGGT--T 200

Query:   262 SVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVY 321
               +A+ PGV  T ++R +P    L+A   + L  L+Q  E G    L AA  P    G Y
Sbjct:   201 IAVASHPGVSNTEVVRNMPR--PLVAVAAI-LAPLMQDAELGALPTLRAATDPAVRGGQY 257

Query:   322 F----FG---GKGRTVNSSALSFNSKLAGELWTTS 349
             F    FG   G  + V SSA S + +L   LW  S
Sbjct:   258 FGPDGFGEIRGYPKVVASSAQSHDEQLQRRLWAVS 292

GO:0005886 "plasma membrane" evidence=IDA

UNIPROTKB|F1P604 DHRS13 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
 Identities = 92/307 (29%), Positives = 135/307 (43%)

Query:    48 KRCVPPITGIKRPVCIVXXXXXXXXXXXXXXXXREGFHVVLVGRSSHLLSETMADITSRN 107
             ++C   +TG      +V                R G  V+L  R+     + +A+I   +
Sbjct:    40 RQCSTDLTG---KTAVVTGANSGIGKAVCQELARRGARVILACRNWERGQKALAEIQVAS 96

Query:   108 KDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYD 167
             K   L   QVDLSS  S+  F     +WLL    +  I LL+NNA I      LTPEG D
Sbjct:    97 KGTCLLLGQVDLSSMASIRSFA----RWLLQE--YPEIHLLVNNAAISGFPKTLTPEGLD 150

Query:   168 QMMSTNYIGAFFXXXXXXXXXXNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSK 227
                +TNY+G F            +   +R+VNV+SF H + +   V+ + +TG      K
Sbjct:   151 LTFATNYVGPFLLTNLLQGALQRAG-SARVVNVSSFRHAHGY---VDEKHLTGA----GK 202

Query:   228 CYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMA 287
                  + Y+ SKL L  F+ EL R L   +   V+V + DPGVV T IM+  P +L    
Sbjct:   203 PLNLIQSYDCSKLLLTSFTGELARRL---QGTGVTVNSVDPGVVYTEIMKPYP-WLYRFL 258

Query:   288 FTVLKLLGLLQSPEKGINSVLDAALAPP--ETSGVYFFGGKGRTVNSSALSFNSKLAGEL 345
             F +       +  ++G   VL  +LA      SG YF      T+ + A   + ++A  L
Sbjct:   259 FWLFSFF--CKDVKQGAIPVLYLSLAKELDGVSGKYFSSSCMITLPTEAAQ-DPQVAQSL 315

Query:   346 WTTSCNL 352
             W  S  L
Sbjct:   316 WNASVQL 322

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

ZFIN|ZDB-GENE-060620-2 dhrsx "dehydrogenase/reductase (SDR family) X-linked" [Danio rerio (taxid:7955)]

 Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
 Identities = 78/273 (28%), Positives = 127/273 (46%)

Query:    85 HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSS 144
             HV++ G         +  I       ++E   +DL+S  SV +F   +Q++   +     
Sbjct:    67 HVIIAGNEEEEGLAAVKKIQEELNQGKVEFMYLDLASLTSVRQF---VQRY---NAKGLP 120

Query:   145 IQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFXXXXXXXXXXNSPVP---SRIVNVT 201
             + +L+NNAG++    R T +G++     NY+G F            +  P   SRIV ++
Sbjct:   121 LHVLVNNAGVMLVPERRTEDGFELHFGLNYLGHFLLTNLLLGALRKTGKPGKCSRIVIMS 180

Query:   202 SFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHV 261
             S TH   +  ++  + + G+      CY     Y  SKL LL+ SY L   L L +   V
Sbjct:   181 SATH---YGGRLTLDDLQGRL-----CYSSHAAYAQSKLALLLLSYHLQEQL-LVRGDPV 231

Query:   262 SVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPP--ETSG 319
             +V A DPG+V T +   + S   +      KLL   ++P +G ++ + AA A       G
Sbjct:   232 TVNAVDPGMVDTALYDNLCSPAQVAKKPFAKLL--FRTPAEGASTAIYAAAASELEGIGG 289

Query:   320 VYFFGGKGRTVNSSALSFNSKLAGELWTTSCNL 352
             +Y + G  R   SSALS++ +L  +LW  SC L
Sbjct:   290 LYLYNG--RKTESSALSYDKRLQTKLWKQSCAL 320

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	365
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	5e-62
PRK06197	306	PRK06197, PRK06197, short chain dehydrogenase; Pro	5e-47
cd05233	234	cd05233, SDR_c, classical (c) SDRs	5e-35
cd09807	274	cd09807, retinol-DH_like_SDR_c, retinol dehydrogen	6e-34
cd09810	311	cd09810, LPOR_like_SDR_c_like, light-dependent pro	4e-30
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	6e-28
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	3e-26
cd09809	284	cd09809, human_WWOX_like_SDR_c-like, human WWOX (W	1e-25
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	2e-25
PRK05854	313	PRK05854, PRK05854, short chain dehydrogenase; Pro	3e-25
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	2e-22
PRK07453	322	PRK07453, PRK07453, protochlorophyllide oxidoreduc	4e-22
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	2e-21
PRK06196	315	PRK06196, PRK06196, oxidoreductase; Provisional	3e-21
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	4e-21
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-21
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	7e-21
PRK12745	256	PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote	4e-20
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	7e-20
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	2e-19
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	3e-19
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-19
PRK07023	243	PRK07023, PRK07023, short chain dehydrogenase; Pro	5e-19
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	7e-19
PRK08589	272	PRK08589, PRK08589, short chain dehydrogenase; Val	1e-18
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	2e-18
cd05367	241	cd05367, SPR-like_SDR_c, sepiapterin reductase (SP	4e-18
cd09808	255	cd09808, DHRS-12_like_SDR_c-like, human dehydrogen	5e-18
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	6e-18
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	7e-18
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	2e-17
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-17
PRK06914	280	PRK06914, PRK06914, short chain dehydrogenase; Pro	3e-17
TIGR01289	314	TIGR01289, LPOR, light-dependent protochlorophylli	3e-17
cd05364	253	cd05364, SDR_c11, classical (c) SDR, subgroup 11	4e-17
PRK06949	258	PRK06949, PRK06949, short chain dehydrogenase; Pro	8e-17
PRK12746	254	PRK12746, PRK12746, short chain dehydrogenase; Pro	1e-16
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	1e-16
cd05332	257	cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste	3e-16
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	1e-15
PLN00015	308	PLN00015, PLN00015, protochlorophyllide reductase	1e-15
PRK05866	293	PRK05866, PRK05866, short chain dehydrogenase; Pro	2e-15
PRK09072	263	PRK09072, PRK09072, short chain dehydrogenase; Pro	2e-15
PRK06924	251	PRK06924, PRK06924, short chain dehydrogenase; Pro	2e-15
cd05337	255	cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl	2e-15
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	3e-15
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	3e-15
cd05369	249	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta	7e-15
COG3967	245	COG3967, DltE, Short-chain dehydrogenase involved	7e-15
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	2e-14
PRK07454	241	PRK07454, PRK07454, short chain dehydrogenase; Pro	2e-14
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	3e-14
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	4e-14
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	5e-14
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	6e-14
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	1e-13
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-13
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	1e-13
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	2e-13
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	2e-13
cd05343	250	cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c	3e-13
cd08944	246	cd08944, SDR_c12, classical (c) SDR, subgroup 12	6e-13
PRK06124	256	PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro	6e-13
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	8e-13
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	8e-13
PRK06138	252	PRK06138, PRK06138, short chain dehydrogenase; Pro	1e-12
cd09805	281	cd09805, type2_17beta_HSD-like_SDR_c, human 17beta	2e-12
PRK05855	582	PRK05855, PRK05855, short chain dehydrogenase; Val	2e-12
PRK12747	252	PRK12747, PRK12747, short chain dehydrogenase; Pro	2e-12
PRK07109	334	PRK07109, PRK07109, short chain dehydrogenase; Pro	2e-12
PRK06198	260	PRK06198, PRK06198, short chain dehydrogenase; Pro	2e-12
cd05356	239	cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst	3e-12
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	4e-12
cd05338	246	cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena	6e-12
PRK07832	272	PRK07832, PRK07832, short chain dehydrogenase; Pro	7e-12
PRK07063	260	PRK07063, PRK07063, short chain dehydrogenase; Pro	7e-12
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	8e-12
PRK12937	245	PRK12937, PRK12937, short chain dehydrogenase; Pro	1e-11
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	1e-11
cd05360	233	cd05360, SDR_c3, classical (c) SDR, subgroup 3	1e-11
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	1e-11
cd05340	236	cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li	1e-11
cd05359	242	cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c	1e-11
PRK12827	249	PRK12827, PRK12827, short chain dehydrogenase; Pro	1e-11
cd08951	260	cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13	2e-11
cd08941	290	cd08941, 3KS_SDR_c, 3-keto steroid reductase, clas	2e-11
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	2e-11
PRK08219	227	PRK08219, PRK08219, short chain dehydrogenase; Pro	4e-11
TIGR01832	248	TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena	5e-11
cd05330	257	cd05330, cyclohexanol_reductase_SDR_c, cyclohexano	6e-11
PRK06172	253	PRK06172, PRK06172, short chain dehydrogenase; Pro	6e-11
PRK08945	247	PRK08945, PRK08945, putative oxoacyl-(acyl carrier	7e-11
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	8e-11
PRK07062	265	PRK07062, PRK07062, short chain dehydrogenase; Pro	1e-10
PRK06398	258	PRK06398, PRK06398, aldose dehydrogenase; Validate	1e-10
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	1e-10
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	1e-10
PRK07478	254	PRK07478, PRK07478, short chain dehydrogenase; Pro	1e-10
PRK07060	245	PRK07060, PRK07060, short chain dehydrogenase; Pro	2e-10
PRK06125	259	PRK06125, PRK06125, short chain dehydrogenase; Pro	2e-10
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	4e-10
cd11730	206	cd11730, Tthb094_like_SDR_c, Tthb094 and related p	4e-10
PRK09730	247	PRK09730, PRK09730, putative NAD(P)-binding oxidor	4e-10
cd08940	258	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge	4e-10
TIGR02632	676	TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate	4e-10
PRK07775	274	PRK07775, PRK07775, short chain dehydrogenase; Pro	4e-10
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	5e-10
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	5e-10
cd05373	238	cd05373, SDR_c10, classical (c) SDR, subgroup 10	7e-10
cd05357	234	cd05357, PR_SDR_c, pteridine reductase (PR), class	9e-10
cd05350	239	cd05350, SDR_c6, classical (c) SDR, subgroup 6	9e-10
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-09
PRK07774	250	PRK07774, PRK07774, short chain dehydrogenase; Pro	2e-09
cd08943	250	cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al	2e-09
PRK12743	256	PRK12743, PRK12743, oxidoreductase; Provisional	2e-09
PRK08213	259	PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro	2e-09
PRK08277	278	PRK08277, PRK08277, D-mannonate oxidoreductase; Pr	3e-09
TIGR01500	256	TIGR01500, sepiapter_red, sepiapterin reductase	3e-09
cd05355	270	cd05355, SDR_c1, classical (c) SDR, subgroup 1	3e-09
cd08942	250	cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy	4e-09
PRK06182	273	PRK06182, PRK06182, short chain dehydrogenase; Val	4e-09
PRK12935	247	PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro	6e-09
PRK08628	258	PRK08628, PRK08628, short chain dehydrogenase; Pro	7e-09
PRK06500	249	PRK06500, PRK06500, short chain dehydrogenase; Pro	7e-09
cd08935	271	cd08935, mannonate_red_SDR_c, putative D-mannonate	8e-09
PRK06935	258	PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog	9e-09
PLN02780	320	PLN02780, PLN02780, ketoreductase/ oxidoreductase	1e-08
PRK06550	235	PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-08
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	2e-08
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	3e-08
PRK08017	256	PRK08017, PRK08017, oxidoreductase; Provisional	3e-08
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	3e-08
PRK05650	270	PRK05650, PRK05650, short chain dehydrogenase; Pro	3e-08
cd05353	250	cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-	4e-08
PRK08643	256	PRK08643, PRK08643, acetoin reductase; Validated	4e-08
PRK08267	260	PRK08267, PRK08267, short chain dehydrogenase; Pro	5e-08
cd05371	252	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr	5e-08
PRK08217	253	PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein)	6e-08
cd05354	235	cd05354, SDR_c7, classical (c) SDR, subgroup 7	7e-08
cd08945	258	cd08945, PKR_SDR_c, Polyketide ketoreductase, clas	7e-08
PRK12384	259	PRK12384, PRK12384, sorbitol-6-phosphate dehydroge	7e-08
cd05328	250	cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid de	7e-08
PRK06179	270	PRK06179, PRK06179, short chain dehydrogenase; Pro	8e-08
TIGR03206	250	TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy	8e-08
PRK07677	252	PRK07677, PRK07677, short chain dehydrogenase; Pro	1e-07
PRK10538	248	PRK10538, PRK10538, malonic semialdehyde reductase	1e-07
PRK08936	261	PRK08936, PRK08936, glucose-1-dehydrogenase; Provi	1e-07
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	2e-07
TIGR02415	254	TIGR02415, 23BDH, acetoin reductases	2e-07
PRK06123	248	PRK06123, PRK06123, short chain dehydrogenase; Pro	2e-07
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	2e-07
PRK12936	245	PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-prote	2e-07
PRK07069	251	PRK07069, PRK07069, short chain dehydrogenase; Val	2e-07
PRK07814	263	PRK07814, PRK07814, short chain dehydrogenase; Pro	2e-07
PRK06701	290	PRK06701, PRK06701, short chain dehydrogenase; Pro	2e-07
pfam08659	181	pfam08659, KR, KR domain	3e-07
PRK13394	262	PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas	3e-07
cd09763	265	cd09763, DHRS1-like_SDR_c, human dehydrogenase/red	3e-07
PRK08261	450	PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-07
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	4e-07
PRK07825	273	PRK07825, PRK07825, short chain dehydrogenase; Pro	5e-07
PRK09135	249	PRK09135, PRK09135, pteridine reductase; Provision	5e-07
PRK12823	260	PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1	5e-07
PRK08264	238	PRK08264, PRK08264, short chain dehydrogenase; Val	6e-07
cd05274	375	cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatt	6e-07
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	6e-07
PRK07792	306	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein)	7e-07
PRK08063	250	PRK08063, PRK08063, enoyl-(acyl carrier protein) r	1e-06
cd09762	243	cd09762, HSDL2_SDR_c, human hydroxysteroid dehydro	1e-06
PRK06077	252	PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-06
cd05349	246	cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl	2e-06
TIGR01829	242	TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta	2e-06
cd08937	256	cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa	2e-06
PRK06947	248	PRK06947, PRK06947, glucose-1-dehydrogenase; Provi	3e-06
PRK07024	257	PRK07024, PRK07024, short chain dehydrogenase; Pro	3e-06
PRK07831	262	PRK07831, PRK07831, short chain dehydrogenase; Pro	3e-06
PRK08265	261	PRK08265, PRK08265, short chain dehydrogenase; Pro	4e-06
TIGR03971	265	TIGR03971, SDR_subfam_1, oxidoreductase, SDR famil	6e-06
cd05363	254	cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH),	6e-06
PRK06194	287	PRK06194, PRK06194, hypothetical protein; Provisio	7e-06
cd05345	248	cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl	8e-06
PRK08703	239	PRK08703, PRK08703, short chain dehydrogenase; Pro	8e-06
PRK05872	296	PRK05872, PRK05872, short chain dehydrogenase; Pro	9e-06
PRK07097	265	PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro	1e-05
cd08953	436	cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup	1e-05
PRK06180	277	PRK06180, PRK06180, short chain dehydrogenase; Pro	1e-05
cd05331	244	cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz	1e-05
PRK06114	254	PRK06114, PRK06114, short chain dehydrogenase; Pro	1e-05
cd08930	250	cd08930, SDR_c8, classical (c) SDR, subgroup 8	2e-05
PRK07577	234	PRK07577, PRK07577, short chain dehydrogenase; Pro	2e-05
PRK07523	255	PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro	2e-05
cd05368	241	cd05368, DHRS6_like_SDR_c, human DHRS6-like, class	2e-05
PRK08278	273	PRK08278, PRK08278, short chain dehydrogenase; Pro	2e-05
PRK05993	277	PRK05993, PRK05993, short chain dehydrogenase; Pro	2e-05
cd11731	198	cd11731, Lin1944_like_SDR_c, Lin1944 and related p	3e-05
cd08936	256	cd08936, CR_SDR_c, Porcine peroxisomal carbonyl re	4e-05
PRK05693	274	PRK05693, PRK05693, short chain dehydrogenase; Pro	4e-05
PRK06139	330	PRK06139, PRK06139, short chain dehydrogenase; Pro	5e-05
PRK08642	253	PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein)	8e-05
cd05322	257	cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehy	8e-05
PRK07041	230	PRK07041, PRK07041, short chain dehydrogenase; Pro	8e-05
PRK07890	258	PRK07890, PRK07890, short chain dehydrogenase; Pro	8e-05
PRK12481	251	PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrog	1e-04
PRK08263	275	PRK08263, PRK08263, short chain dehydrogenase; Pro	1e-04
cd08931	227	cd08931, SDR_c9, classical (c) SDR, subgroup 9	1e-04
PRK06128	300	PRK06128, PRK06128, oxidoreductase; Provisional	1e-04
cd05365	242	cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi	1e-04
cd05326	249	cd05326, secoisolariciresinol-DH_like_SDR_c, secoi	1e-04
PRK06057	255	PRK06057, PRK06057, short chain dehydrogenase; Pro	2e-04
PRK08251	248	PRK08251, PRK08251, short chain dehydrogenase; Pro	3e-04
PRK07074	257	PRK07074, PRK07074, short chain dehydrogenase; Pro	4e-04
PRK07985	294	PRK07985, PRK07985, oxidoreductase; Provisional	5e-04
TIGR01831	239	TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-prote	6e-04
PRK09291	257	PRK09291, PRK09291, short chain dehydrogenase; Pro	6e-04
cd08933	261	cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl	7e-04
PRK07035	252	PRK07035, PRK07035, short chain dehydrogenase; Pro	7e-04
PRK06953	222	PRK06953, PRK06953, short chain dehydrogenase; Pro	0.001
smart00822	180	smart00822, PKS_KR, This enzymatic domain is part	0.001
PRK06523	260	PRK06523, PRK06523, short chain dehydrogenase; Pro	0.001
PRK05875	276	PRK05875, PRK05875, short chain dehydrogenase; Pro	0.001
cd05348	257	cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro	0.003
PRK07806	248	PRK07806, PRK07806, short chain dehydrogenase; Pro	0.003
PRK07791	286	PRK07791, PRK07791, short chain dehydrogenase; Pro	0.003
TIGR02685	267	TIGR02685, pter_reduc_Leis, pteridine reductase	0.003
PRK08993	253	PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrog	0.004
cd09761	242	cd09761, A3DFK9-like_SDR_c, Clostridium thermocell	0.004
PRK05786	238	PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein)	0.004

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score =  199 bits (508), Expect = 5e-62
 Identities = 103/288 (35%), Positives = 152/288 (52%), Gaps = 23/288 (7%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V ++TGA SG+G   A  L++ G HV++  R+     E  A+I     +A++E  Q+DLS
Sbjct: 3   VVVITGANSGIGKETARELAKRGAHVIIACRNEEKGEEAAAEIKKETGNAKVEVIQLDLS 62

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFL 180
           S  SV +F +              + +LINNAGI+A   RLT +G++   + NY+G F L
Sbjct: 63  SLASVRQFAEEFL------ARFPRLDILINNAGIMAPPRRLTKDGFELQFAVNYLGHFLL 116

Query: 181 TKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKL 240
           T LLLP+LK S  PSRIVNV+S  HR                   +K Y   + Y  SKL
Sbjct: 117 TNLLLPVLKASA-PSRIVNVSSIAHR------AGPIDFNDLDLENNKEYSPYKAYGQSKL 169

Query: 241 CLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSP 300
             ++F+ EL R L   +   V+V A  PGVV+T ++R   SF   + + +L+   L +SP
Sbjct: 170 ANILFTRELARRL---EGTGVTVNALHPGVVRTELLRRNGSF--FLLYKLLRPF-LKKSP 223

Query: 301 EKGINSVLDAALAP--PETSGVYFFGGKGRTVNSSALSFNSKLAGELW 346
           E+G  + L AA +P     SG YF     +   SS+ + + +LA +LW
Sbjct: 224 EQGAQTALYAATSPELEGVSGKYF--SDCKIKMSSSEALDEELAEKLW 269

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|235737 PRK06197, PRK06197, short chain dehydrogenase; Provisional

 Score =  161 bits (410), Expect = 5e-47
 Identities = 114/307 (37%), Positives = 154/307 (50%), Gaps = 29/307 (9%)

Query: 51  VPPITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDA 110
           +P  +G  R V +VTGA +GLG   A AL+ +G HVVL  R+        A IT+    A
Sbjct: 11  IPDQSG--R-VAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGA 67

Query: 111 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMM 170
            +   ++DL+S  SV    D+L+        +  I LLINNAG++ T  + T +G++   
Sbjct: 68  DVTLQELDLTSLASVRAAADALR------AAYPRIDLLINNAGVMYTPKQTTADGFELQF 121

Query: 171 STNYIGAFFLTKLLLPLLKNSPVP-SRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCY 229
            TN++G F LT LLL  L   PVP SR+V V+S  HR    A ++ + +  +   R   Y
Sbjct: 122 GTNHLGHFALTGLLLDRLL--PVPGSRVVTVSSGGHR--IRAAIHFDDLQWE---RR--Y 172

Query: 230 PCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFT 289
                Y  SKL  L+F+YEL R L    +  ++V AA PGV  T + R +P  L     T
Sbjct: 173 NRVAAYGQSKLANLLFTYELQRRLAAAGATTIAV-AAHPGVSNTELARNLPRAL-RPVAT 230

Query: 290 VLKLLGLLQSPEKGINSVLDAALAPPETSGVYF----FG---GKGRTVNSSALSFNSKLA 342
           VL  L L QSPE G    L AA  P    G Y+    FG   G  + V SSA S +  L 
Sbjct: 231 VLAPL-LAQSPEMGALPTLRAATDPAVRGGQYYGPDGFGEQRGYPKVVASSAQSHDEDLQ 289

Query: 343 GELWTTS 349
             LW  S
Sbjct: 290 RRLWAVS 296

Length = 306

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score =  128 bits (323), Expect = 5e-35
 Identities = 70/266 (26%), Positives = 105/266 (39%), Gaps = 47/266 (17%)

Query: 62  CIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSS 121
            +VTGA+SG+G A A  L+REG  VVL  R+   L+E  A            A Q D+S 
Sbjct: 1   ALVTGASSGIGRAIARRLAREGAKVVLADRNEEALAELAA---IEALGGNAVAVQADVSD 57

Query: 122 FQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGAFF 179
            + V    +         +    + +L+NNAGI        LT E +D+++  N  G F 
Sbjct: 58  EEDVEALVEEAL------EEFGRLDILVNNAGIARPGPLEELTDEDWDRVLDVNLTGVFL 111

Query: 180 LTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITG----KFFLRSKCYPCARIY 235
           LT+  LP +K      RIVN++S                      K  L           
Sbjct: 112 LTRAALPHMKKQG-GGRIVNISSVA------GLRPLPGQAAYAASKAALEG--------- 155

Query: 236 EYSKLCLLIFSYELHRNLGLD-KSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLL 294
                        L R+L L+     + V A  PG+V T ++ ++    +         L
Sbjct: 156 -------------LTRSLALELAPYGIRVNAVAPGLVDTPMLAKLGPEEAEKELAAAIPL 202

Query: 295 GLLQSPEKGINSVLDAALAPPETSGV 320
           G L +PE+   +V+   LA  E S +
Sbjct: 203 GRLGTPEEVAEAVV--FLASDEASYI 226

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs

 Score =  126 bits (317), Expect = 6e-34
 Identities = 89/295 (30%), Positives = 136/295 (46%), Gaps = 29/295 (9%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
             I+TGA +G+G   A  L+R G  V++  R      E  A+I     +  +    +DL+
Sbjct: 3   TVIITGANTGIGKETARELARRGARVIMACRDMAKCEEAAAEIRRDTLNHEVIVRHLDLA 62

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFL 180
           S +S+  F     ++L + D    + +LINNAG++      T +G++     N++G F L
Sbjct: 63  SLKSIRAF---AAEFLAEED---RLDVLINNAGVMRCPYSKTEDGFEMQFGVNHLGHFLL 116

Query: 181 TKLLLPLLKNSPVPSRIVNVTSFTHR--NVFNAQVNNETITGKFFLRSKCYPCARIYEYS 238
           T LLL LLK S  PSRIVNV+S  H+   +    +N+E          K Y     Y  S
Sbjct: 117 TNLLLDLLKKS-APSRIVNVSSLAHKAGKINFDDLNSE----------KSYNTGFAYCQS 165

Query: 239 KLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV--PSFLSLMAFTVLKLLGL 296
           KL  ++F+ EL R L   +   V+V A  PGVV+T + R               L     
Sbjct: 166 KLANVLFTRELARRL---QGTGVTVNALHPGVVRTELGRHTGIHHLFLSTLLNPLFWP-F 221

Query: 297 LQSPEKGINSVLDAALAP--PETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTS 349
           +++P +G  + +  ALA      SG YF   K +     A+  + + A  LW  S
Sbjct: 222 VKTPREGAQTSIYLALAEELEGVSGKYFSDCKLKEPAPEAM--DEETARRLWEIS 274

Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274

>gnl|CDD|187670 cd09810, LPOR_like_SDR_c_like, light-dependent protochlorophyllide reductase (LPOR)-like, classical (c)-like SDRs

 Score =  116 bits (293), Expect = 4e-30
 Identities = 98/328 (29%), Positives = 142/328 (43%), Gaps = 62/328 (18%)

Query: 63  IVTGATSGLGAAAAYALSREG-FHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSS 121
           ++TGA+SGLG AAA AL+R G +HVV+  R   L +E  A      KD        DL+S
Sbjct: 5   VITGASSGLGLAAAKALARRGEWHVVMACRDF-LKAEQAAQEVGMPKD-SYSVLHCDLAS 62

Query: 122 FQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI---LATSSRLTPEGYDQMMSTNYIGAF 178
             SV +F D+ ++          +  L+ NA +    A   R T +G++  +  N++G F
Sbjct: 63  LDSVRQFVDNFRRTG------RPLDALVCNAAVYLPTAKEPRFTADGFELTVGVNHLGHF 116

Query: 179 FLTKLLLPLLKNSP-VPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKC--------- 228
            LT LLL  L+ S     RIV V S TH        N  T+ G    R+           
Sbjct: 117 LLTNLLLEDLQRSENASPRIVIVGSITH--------NPNTLAGNVPPRATLGDLEGLAGG 168

Query: 229 ------------YPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVV-KTNI 275
                       +  A+ Y+ SK+C ++ +YELHR   L +   ++  +  PG + +T +
Sbjct: 169 LKGFNSMIDGGEFEGAKAYKDSKVCNMLTTYELHRR--LHEETGITFNSLYPGCIAETGL 226

Query: 276 MREVPSFLSLMAFTVLKLLGLLQSPEKGINSV------LDAALAPPE--TSGVYFFGGK- 326
            RE       +     K         KG  S       L A +A P    SGVY+  GK 
Sbjct: 227 FREHYPLFRTLFPPFQKY------ITKGYVSEEEAGERLAAVIADPSLGVSGVYWSWGKA 280

Query: 327 -GRTVN-SSALSFNSKLAGELWTTSCNL 352
            G   N SS  S + + A +LW  S  L
Sbjct: 281 SGSFENQSSQESSDDEKARKLWEISEKL 308

Classical SDR-like subgroup containing LPOR and related proteins. Protochlorophyllide (Pchlide) reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 311

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score =  109 bits (274), Expect = 6e-28
 Identities = 72/252 (28%), Positives = 105/252 (41%), Gaps = 40/252 (15%)

Query: 57  IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVG-RSSHLLSETMADITSRNKDARLEAF 115
           +   V +VTGA+SG+G A A AL+REG  VV+   RS    +E +A         R  A 
Sbjct: 3   LSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAV 62

Query: 116 QVDLSS-FQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL---TPEGYDQMMS 171
             D+S   +SV     + ++          I +L+NNAGI    + L   T E +D+++ 
Sbjct: 63  AADVSDDEESVEALVAAAEEE------FGRIDILVNNAGIAGPDAPLEELTEEDWDRVID 116

Query: 172 TNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPC 231
            N +GAF LT+  LPL+K      RIVN++S         Q                   
Sbjct: 117 VNLLGAFLLTRAALPLMK----KQRIVNISSVAGLGGPPGQAA----------------- 155

Query: 232 ARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVL 291
              Y  SK  L+  +  L   L     R + V A  PG + T +   + S        + 
Sbjct: 156 ---YAASKAALIGLTKALALELA---PRGIRVNAVAPGYIDTPMTAALESAELEALKRLA 209

Query: 292 KL--LGLLQSPE 301
               LG L +PE
Sbjct: 210 ARIPLGRLGTPE 221

Length = 251

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score =  104 bits (261), Expect = 3e-26
 Identities = 71/272 (26%), Positives = 106/272 (38%), Gaps = 57/272 (20%)

Query: 61  VCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDL 119
           V +VTGA  G+G      L++ G   V+L  R        +  +  R +   +   Q+D+
Sbjct: 2   VALVTGANRGIGFEIVRQLAKSGPGTVILTARDVERGQAAVEKL--RAEGLSVRFHQLDV 59

Query: 120 SSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATS---SRLTPEGYDQMMSTNYIG 176
           +   S+    D +++       +  + +L+NNAGI       S  T E   + M TN+ G
Sbjct: 60  TDDASIEAAADFVEE------KYGGLDILVNNAGIAFKGFDDSTPTREQARETMKTNFFG 113

Query: 177 AFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYE 236
              +T+ LLPLLK SP   RIVNV+S                 G              Y 
Sbjct: 114 TVDVTQALLPLLKKSPAG-RIVNVSS---------------GLG---------SLTSAYG 148

Query: 237 YSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGL 296
            SK  L   +  L + L   K   + V A  PG VKT+           M          
Sbjct: 149 VSKAALNALTRILAKEL---KETGIKVNACCPGWVKTD-----------MGG-----GKA 189

Query: 297 LQSPEKGINSVLDAALAPPETS-GVYFFGGKG 327
            ++PE+G  + +  AL PP+      FF  K 
Sbjct: 190 PKTPEEGAETPVYLALLPPDGEPTGKFFSDKK 221

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|187669 cd09809, human_WWOX_like_SDR_c-like, human WWOX (WW domain-containing oxidoreductase)-like, classical (c)-like SDRs

 Score =  104 bits (260), Expect = 1e-25
 Identities = 85/298 (28%), Positives = 144/298 (48%), Gaps = 25/298 (8%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V I+TGA SG+G   A + +  G HV+L  R+    S  ++ I      AR+EA  +DL+
Sbjct: 3   VIIITGANSGIGFETARSFALHGAHVILACRNMSRASAAVSRILEEWHKARVEAMTLDLA 62

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFL 180
           S +SV +F ++ +      +    + +L+ NA + A    LT +G +     N++G F+L
Sbjct: 63  SLRSVQRFAEAFKA----KNSP--LHVLVCNAAVFALPWTLTEDGLETTFQVNHLGHFYL 116

Query: 181 TKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRS---KCYPCARIYEY 237
            +LL  +L+ S  P+R++ V+S +HR      + +      F L S   K Y     Y  
Sbjct: 117 VQLLEDVLRRSA-PARVIVVSSESHR---FTDLPDSCGNLDFSLLSPPKKKYWSMLAYNR 172

Query: 238 SKLCLLIFSYELHRNLGLDKSRHVSVIAADPG-VVKTNIMREVPSFLSLMAFTVLKLLGL 296
           +KLC ++FS ELHR L     R ++  +  PG ++ ++I R      +L+ FT+ +    
Sbjct: 173 AKLCNILFSNELHRRL---SPRGITSNSLHPGNMMYSSIHRNW-WVYTLL-FTLAR--PF 225

Query: 297 LQSPEKGINSVLDAALAPPET--SGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNL 352
            +S ++G  + +  A AP      G+YF          S  + +   A +LW  S  L
Sbjct: 226 TKSMQQGAATTVYCATAPELEGLGGMYF--NNCFRCLPSPEAQSEATAQQLWELSERL 281

Classical-like SDR domain of human WWOX and related proteins. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 284

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score =  102 bits (257), Expect = 2e-25
 Identities = 56/232 (24%), Positives = 90/232 (38%), Gaps = 42/232 (18%)

Query: 55  TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEA 114
           T +K  V ++TGA+SG+G A A AL+  G  VVL  R      E +  +          A
Sbjct: 2   TTLKGKVALITGASSGIGEATARALAEAGAKVVLAARR----EERLEALADEIGAGAALA 57

Query: 115 FQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMST 172
             +D++   +V    ++L       +    I +L+NNAG+           + +D+M+ T
Sbjct: 58  LALDVTDRAAVEAAIEALP------EEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDT 111

Query: 173 NYIGAFFLTKLLLPLLK--NSPVPSRIVNVTSFTHRNVF-NAQVNNETITGKFFLRSKCY 229
           N  G    T+ +LP +    S     I+N+ S   R  +    V   T   K  +R+   
Sbjct: 112 NVKGLLNGTRAVLPGMVERKSGH---IINLGSIAGRYPYPGGAVYGAT---KAAVRA--- 162

Query: 230 PCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS 281
                          FS  L + L       + V    PG+V+T     V  
Sbjct: 163 ---------------FSLGLRQELA---GTGIRVTVISPGLVETTEFSTVRF 196

Length = 246

>gnl|CDD|235627 PRK05854, PRK05854, short chain dehydrogenase; Provisional

 Score =  103 bits (259), Expect = 3e-25
 Identities = 89/291 (30%), Positives = 131/291 (45%), Gaps = 41/291 (14%)

Query: 51  VPPITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDA 110
           VP ++G KR V  VTGA+ GLG   A  L+  G  V+L  R+       +A I +   DA
Sbjct: 9   VPDLSG-KRAV--VTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDA 65

Query: 111 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSR-LTPEGYDQM 169
           +L    +DLSS  SV    + L+           I LLINNAG++    R  T +G++  
Sbjct: 66  KLSLRALDLSSLASVAALGEQLRA------EGRPIHLLINNAGVMTPPERQTTADGFELQ 119

Query: 170 MSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSF--THRNVFNAQVNNETITGKFFLRSK 227
             TN++G F LT  LLPLL+     +R+ + +S       +    +N E          +
Sbjct: 120 FGTNHLGHFALTAHLLPLLRAG--RARVTSQSSIAARRGAINWDDLNWE----------R 167

Query: 228 CYPCARIYEYSKLCLLIFSYELHRNLGLDKSRH----VSVIAADPGVVKTNIMREVPSF- 282
            Y   R Y  SK+ + +F+ EL R     +SR     ++   A PGV  TN++   P   
Sbjct: 168 SYAGMRAYSQSKIAVGLFALELDR-----RSRAAGWGITSNLAHPGVAPTNLLAARPEVG 222

Query: 283 -----LSLMAFTVLKLLGLL-QSPEKGINSVLDAALAPPETSGVYFFGGKG 327
                L +     L   G L  + E  I   L AA + P+  G  F+G +G
Sbjct: 223 RDKDTLMVRLIRSLSARGFLVGTVESAILPALYAATS-PDAEGGAFYGPRG 272

Length = 313

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score = 94.2 bits (235), Expect = 2e-22
 Identities = 41/145 (28%), Positives = 76/145 (52%), Gaps = 13/145 (8%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V +VTGA+ G+G A A  L+ EG  V +  RS    +ET+ +I +   +A   A + D+S
Sbjct: 2   VALVTGASRGIGRAIALRLAAEGAKVAVTDRSEEAAAETVEEIKALGGNAA--ALEADVS 59

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAF 178
             ++V    + ++           + +L+NNAGI       R++ E +D +++ N  G F
Sbjct: 60  DREAVEALVEKVEAE------FGPVDILVNNAGITRDNLLMRMSEEDWDAVINVNLTGVF 113

Query: 179 FLTKLLLP-LLKNSPVPSRIVNVTS 202
            +T+ ++  ++K      RI+N++S
Sbjct: 114 NVTQAVIRAMIKRR--SGRIINISS 136

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|180983 PRK07453, PRK07453, protochlorophyllide oxidoreductase; Validated

 Score = 95.1 bits (237), Expect = 4e-22
 Identities = 70/250 (28%), Positives = 107/250 (42%), Gaps = 46/250 (18%)

Query: 59  RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVD 118
           +   I+TGA+SG+G  AA AL++ G+HV++  R+    +E  A       D       +D
Sbjct: 6   KGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKK-AEAAAQELGIPPD-SYTIIHID 63

Query: 119 LSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI---LATSSRLTPEGYDQMMSTNYI 175
           L    SV +F D  +       +   +  L+ NA +   L      +P+GY+  M+TN++
Sbjct: 64  LGDLDSVRRFVDDFRA------LGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHL 117

Query: 176 GAFFLTKLLLPLLKNSPVPS-RIVNVTSFTH-----------------------RNVFNA 211
           G F L  LLL  LK SP P  R+V + + T                           F A
Sbjct: 118 GHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPAPADLGDLSGFEAGFKA 177

Query: 212 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG-V 270
            ++     GK F   K       Y+ SKLC ++   ELHR     +S  ++  +  PG V
Sbjct: 178 PIS--MADGKKFKPGKA------YKDSKLCNMLTMRELHRR--YHESTGITFSSLYPGCV 227

Query: 271 VKTNIMREVP 280
             T + R  P
Sbjct: 228 ADTPLFRNTP 237

Length = 322

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score = 91.5 bits (228), Expect = 2e-21
 Identities = 42/149 (28%), Positives = 71/149 (47%), Gaps = 13/149 (8%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADIT--SRNKDARLEAFQVD 118
             ++TG +SG+G A A  L +EG +V++V RS   L E + +I   +     ++     D
Sbjct: 3   HVLITGGSSGIGKALAKELVKEGANVIIVARSESKLEEAVEEIEAEANASGQKVSYISAD 62

Query: 119 LSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSR---LTPEGYDQMMSTNYI 175
           LS ++ V +      +     D+      ++N AGI +       LT E +++ M  NY 
Sbjct: 63  LSDYEEVEQAFAQAVEKGGPPDL------VVNCAGI-SIPGLFEDLTAEEFERGMDVNYF 115

Query: 176 GAFFLTKLLLPLLKNSPVPSRIVNVTSFT 204
           G+  +   +LPL+K    P  IV V+S  
Sbjct: 116 GSLNVAHAVLPLMK-EQRPGHIVFVSSQA 143

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|235736 PRK06196, PRK06196, oxidoreductase; Provisional

 Score = 92.4 bits (230), Expect = 3e-21
 Identities = 47/146 (32%), Positives = 71/146 (48%), Gaps = 13/146 (8%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
             IVTG  SGLG     AL++ G HV++  R   +  E +A I        +E   +DL+
Sbjct: 28  TAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGI------DGVEVVMLDLA 81

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFL 180
             +SV  F +         D    I +LINNAG++A       +G++   +TN++G F L
Sbjct: 82  DLESVRAFAERF------LDSGRRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFAL 135

Query: 181 TKLLLPLLKNSPVPSRIVNVTSFTHR 206
             LL P L      +R+V ++S  HR
Sbjct: 136 VNLLWPALAAGA-GARVVALSSAGHR 160

Length = 315

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score = 90.5 bits (225), Expect = 4e-21
 Identities = 58/220 (26%), Positives = 87/220 (39%), Gaps = 38/220 (17%)

Query: 60  PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDL 119
            V +VTGA+ G+G   A AL+R+G+ V L  R+   L+   A          +EA   D 
Sbjct: 1   KVALVTGASRGIGIEIARALARDGYRVSLGLRNPEDLAALSAS------GGDVEAVPYDA 54

Query: 120 SSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGA 177
              +      D+L+           I +L++NAGI    T    +    +   S N I  
Sbjct: 55  RDPEDARALVDALRDRF------GRIDVLVHNAGIGRPTTLREGSDAELEAHFSINVIAP 108

Query: 178 FFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEY 237
             LT+ LLP L+ +    R+V + S               ++GK  L          Y  
Sbjct: 109 AELTRALLPALREAG-SGRVVFLNS---------------LSGKRVLAG-----NAGYSA 147

Query: 238 SKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMR 277
           SK  L   ++ L R  G D    VS +   PG V T + +
Sbjct: 148 SKFALRALAHAL-RQEGWDHGVRVSAVC--PGFVDTPMAQ 184

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 91.0 bits (227), Expect = 4e-21
 Identities = 67/250 (26%), Positives = 110/250 (44%), Gaps = 48/250 (19%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMAD-ITSRNKDARLEAFQVDL 119
           V +VTGA+ G+G A A  L+ +G +VV+   SS   +E +   I +    A   A Q D+
Sbjct: 7   VALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKAL--AVQGDV 64

Query: 120 SSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIG 176
           S  +SV +   ++  ++         + +L+NNAGI       R+  E +D+++ TN  G
Sbjct: 65  SDAESVERAVDEAKAEF-------GGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTG 117

Query: 177 AFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYE 236
            F LTK +   +       RI+N++S         Q N                    Y 
Sbjct: 118 VFNLTKAVARPMMKQRS-GRIINISSVVGLMGNPGQAN--------------------YA 156

Query: 237 YSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP-----SFLSLMAFTVL 291
            SK  ++ F+  L R L    SR ++V A  PG ++T++   +P     + L+ +     
Sbjct: 157 ASKAGVIGFTKSLARELA---SRGITVNAVAPGFIETDMTDALPEDVKEAILAQIP---- 209

Query: 292 KLLGLLQSPE 301
             LG L  PE
Sbjct: 210 --LGRLGQPE 217

Length = 248

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score = 90.4 bits (225), Expect = 7e-21
 Identities = 57/231 (24%), Positives = 96/231 (41%), Gaps = 41/231 (17%)

Query: 57  IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQ 116
           +K    ++TGA+SG+GA  A  L+R G++++LV R    L     ++  +     +E   
Sbjct: 4   MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTG-VEVEVIP 62

Query: 117 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSR---LTPEGYDQMMSTN 173
            DLS  +++ + +D L++          I +L+NNAG   T      L+ +  ++M+  N
Sbjct: 63  ADLSDPEALERLEDELKERGGP------IDVLVNNAGF-GTFGPFLELSLDEEEEMIQLN 115

Query: 174 YIGAFFLTKLLLP-LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCA 232
            +    LTK +LP +++       I+N+ S                 G         P  
Sbjct: 116 ILALTRLTKAVLPGMVERG--AGHIINIGS---------------AAGL-------IPTP 151

Query: 233 R--IYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS 281
              +Y  +K  +L FS  L   L   K   V V A  PG  +T       S
Sbjct: 152 YMAVYSATKAFVLSFSEALREEL---KGTGVKVTAVCPGPTRTEFFDAKGS 199

Length = 265

>gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 88.1 bits (219), Expect = 4e-20
 Identities = 45/155 (29%), Positives = 70/155 (45%), Gaps = 20/155 (12%)

Query: 59  RPVCIVTGATSGLGAAAAYALSREGFHVVLVG-RSSHLLSETMADITSRNKDARLEAFQV 117
           RPV +VTG   G+G   A AL+  GF + +        L+ T  ++ +      +  F  
Sbjct: 2   RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRAL--GVEVIFFPA 59

Query: 118 DLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSR-----LTPEGYDQMMST 172
           D++   +     D+ Q           I  L+NNAG+     R     LTPE +D++++ 
Sbjct: 60  DVADLSAHEAMLDAAQAAW------GRIDCLVNNAGV-GVKVRGDLLDLTPESFDRVLAI 112

Query: 173 NYIGAFFLT----KLLLPLLKNSPVPSR-IVNVTS 202
           N  G FFLT    K +L   +   +P R IV V+S
Sbjct: 113 NLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSS 147

Length = 256

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 87.1 bits (217), Expect = 7e-20
 Identities = 38/142 (26%), Positives = 71/142 (50%), Gaps = 11/142 (7%)

Query: 63  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 122
           +VTGA+ G+G A A  L+ +G  VV+   +        A++ +   +AR      D+S  
Sbjct: 9   LVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEAR--VLVFDVSDE 66

Query: 123 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFL 180
            +V   +  ++      +   ++ +L+NNAGI   A   R++ E +D+++  N  G F +
Sbjct: 67  AAV---RALIEA---AVEAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNV 120

Query: 181 TKLLLPLLKNSPVPSRIVNVTS 202
            +  LP +  +    RIVN++S
Sbjct: 121 VRAALPPMIKARY-GRIVNISS 141

Length = 246

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 85.7 bits (213), Expect = 2e-19
 Identities = 58/271 (21%), Positives = 105/271 (38%), Gaps = 58/271 (21%)

Query: 63  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 122
           ++TG +SG+G A A AL+ +G+ V+   R+   L E++ +      +  LE  ++D++  
Sbjct: 4   LITGCSSGIGLALALALAAQGYRVIATARNPDKL-ESLGE----LLNDNLEVLELDVTDE 58

Query: 123 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGAFFL 180
           +S+   K ++++ +   +    I +L+NNAG          + E   ++   N  G   +
Sbjct: 59  ESI---KAAVKEVI---ERFGRIDVLVNNAGYGLFGPLEETSIEEVRELFEVNVFGPLRV 112

Query: 181 TKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKL 240
           T+  LPL++      RIVNV+S               + G         P    Y  SK 
Sbjct: 113 TRAFLPLMRKQGSG-RIVNVSS---------------VAGLV-----PTPFLGPYCASKA 151

Query: 241 CLLIFS----YELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS-------------FL 283
            L   S     EL    G+     V++I  +PG V+T                       
Sbjct: 152 ALEALSESLRLEL-APFGI----KVTII--EPGPVRTGFADNAAGSALEDPEISPYAPER 204

Query: 284 SLMAFTVLKLLGLLQSPEKGINSVLDAALAP 314
             +      +      PEK  + ++ A  + 
Sbjct: 205 KEIKENAAGVGSNPGDPEKVADVIVKALTSE 235

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score = 85.8 bits (213), Expect = 3e-19
 Identities = 47/146 (32%), Positives = 69/146 (47%), Gaps = 11/146 (7%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
             +VTGA  GLGAA A AL+  G  V      +    E  A + +    A   A   DL+
Sbjct: 9   RALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRA--HAIAADLA 66

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGAF 178
              SV +F D+    L        +  L+NNAGI    +++ L  + +D +M+ N  G F
Sbjct: 67  DPASVQRFFDAAAAAL------GGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTF 120

Query: 179 FLTKLLLPLLKNSPVPSRIVNVTSFT 204
            + +  LP L++S    RIVN+ S T
Sbjct: 121 LMLRAALPHLRDSG-RGRIVNLASDT 145

Length = 250

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 85.3 bits (212), Expect = 4e-19
 Identities = 42/146 (28%), Positives = 73/146 (50%), Gaps = 14/146 (9%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V +VTGA  GLG A A  L+R G  VV+  RS    +E + +        R +A Q D++
Sbjct: 8   VALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVE-AVEALGRRAQAVQADVT 66

Query: 121 SFQSVLKFKDSLQQWLLDSDM--HSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIG 176
                   K +L+   + + +     I +L+NNAGI      + ++ + +D+++  N  G
Sbjct: 67  D-------KAALEA-AVAAAVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSG 118

Query: 177 AFFLTKLLLPLLKNSPVPSRIVNVTS 202
            F L + ++P ++      RIVN++S
Sbjct: 119 VFHLLRAVVPPMRKQR-GGRIVNISS 143

Length = 249

>gnl|CDD|180796 PRK07023, PRK07023, short chain dehydrogenase; Provisional

 Score = 84.7 bits (210), Expect = 5e-19
 Identities = 64/262 (24%), Positives = 100/262 (38%), Gaps = 46/262 (17%)

Query: 63  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 122
           IVTG + GLGAA A  L + G  V+ V RS H        + +     RL   ++DLS  
Sbjct: 5   IVTGHSRGLGAALAEQLLQPGIAVLGVARSRH------PSLAAA-AGERLAEVELDLSDA 57

Query: 123 QSVLKF--KDSLQQWLLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGA 177
            +   +   D L  ++      +S  LLINNAG +      + L      + +  N    
Sbjct: 58  AAAAAWLAGDLLAAFVDG----ASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAP 113

Query: 178 FFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEY 237
             LT  L     +     RI++++S   RN                     Y    +Y  
Sbjct: 114 LMLTAALAQAA-SDAAERRILHISSGAARNA--------------------YAGWSVYCA 152

Query: 238 SKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV-----PSFLSLMAFTVLK 292
           +K  L   +    R + LD +R + +++  PGVV T +   +       F     F  LK
Sbjct: 153 TKAALDHHA----RAVALDANRALRIVSLAPGVVDTGMQATIRATDEERFPMRERFRELK 208

Query: 293 LLGLLQSPEKGINSVLDAALAP 314
             G L +PE     ++   L+ 
Sbjct: 209 ASGALSTPEDAARRLIAYLLSD 230

Length = 243

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 82.6 bits (205), Expect = 7e-19
 Identities = 36/147 (24%), Positives = 67/147 (45%), Gaps = 18/147 (12%)

Query: 61  VCIVTGATSGLGAAAAYALSREG-FHVVLVGRS--SHLLSETMADITSRNKDARLEAFQV 117
             ++TG T GLG A A  L+ EG  H+VLV R   +   +E +A++ +    A +     
Sbjct: 2   TVLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAELVAELEALG--AEVTVAAC 59

Query: 118 DLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYI 175
           D++   ++     +L        +   +  +++NAG+L       LTPE ++++++    
Sbjct: 60  DVADRDALAALLAALPA-----ALG-PLDGVVHNAGVLDDGPLEELTPERFERVLAPKVT 113

Query: 176 GAFFLTKLLLPLLKNSPVPSRIVNVTS 202
           GA+ L +L   L          V  +S
Sbjct: 114 GAWNLHELTRDLDL-----GAFVLFSS 135

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated

 Score = 84.4 bits (209), Expect = 1e-18
 Identities = 50/160 (31%), Positives = 89/160 (55%), Gaps = 20/160 (12%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V ++TGA++G+G A+A AL++EG +V+ V  +   +SET+  I S    A  +A+ VD+S
Sbjct: 8   VAVITGASTGIGQASAIALAQEGAYVLAVDIAEA-VSETVDKIKSNGGKA--KAYHVDIS 64

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTP---EGYDQMMSTNYIGA 177
             Q V  F   +++          + +L NNAG+   + R+     + +D++M+ +  G 
Sbjct: 65  DEQQVKDFASEIKE------QFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGT 118

Query: 178 FFLTKLLLPLLKNSPVPSRIVNVTSFT------HRNVFNA 211
           F +TK+LLPL+        I+N +SF+      +R+ +NA
Sbjct: 119 FLMTKMLLPLMMEQ--GGSIINTSSFSGQAADLYRSGYNA 156

Length = 272

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score = 83.0 bits (206), Expect = 2e-18
 Identities = 38/151 (25%), Positives = 67/151 (44%), Gaps = 13/151 (8%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V +VTGA  G+G A A  L+ +G  V++V       + T   + +     +  A QVD+ 
Sbjct: 8   VALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAG--GKARARQVDVR 65

Query: 121 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGA 177
              ++       ++ +         + +L+ NAGI  L   + +  E +++++  N  G 
Sbjct: 66  DRAALKAAVAAGVEDF-------GRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGT 118

Query: 178 FFLTKLLLPLLKNSPVPSRIVNVTSFTHRNV 208
           F LT+  LP L  +    RIV  +S     V
Sbjct: 119 FLLTQAALPALIRAGGG-RIVLTSSVAGPRV 148

Length = 251

>gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs

 Score = 82.3 bits (204), Expect = 4e-18
 Identities = 70/273 (25%), Positives = 106/273 (38%), Gaps = 47/273 (17%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFH--VVLVGRSSHLLSETMADITSRNKDARLEAFQVD 118
           V I+TGA+ G+G A A  L + G    VVL+ RS   L E   ++       R+   + D
Sbjct: 1   VIILTGASRGIGRALAEELLKRGSPSVVVLLARSEEPLQELKEELRP---GLRVTTVKAD 57

Query: 119 LSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL---TPEGYDQMMSTNYI 175
           LS    V +  +++++      +     LLINNAG L   S++     +   +    N  
Sbjct: 58  LSDAAGVEQLLEAIRK------LDGERDLLINNAGSLGPVSKIEFIDLDELQKYFDLNLT 111

Query: 176 GAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIY 235
               LT  LL   K   +   +VNV+S    N F                        +Y
Sbjct: 112 SPVCLTSTLLRAFKKRGLKKTVVNVSSGAAVNPFKGWG--------------------LY 151

Query: 236 EYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV------PSFLSLMAFT 289
             SK    +F     R L  ++   V V++  PGVV T++ RE+      P   S   F 
Sbjct: 152 CSSKAARDMFF----RVLAAEEPD-VRVLSYAPGVVDTDMQREIRETSADPETRSR--FR 204

Query: 290 VLKLLGLLQSPEKGINSVLDAALAPPETSGVYF 322
            LK  G L  PE+    + +        SG + 
Sbjct: 205 SLKEKGELLDPEQSAEKLANLLEKDKFESGAHV 237

Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241

>gnl|CDD|187668 cd09808, DHRS-12_like_SDR_c-like, human dehydrogenase/reductase SDR family member (DHRS)-12/FLJ13639-like, classical (c)-like SDRs

 Score = 82.3 bits (203), Expect = 5e-18
 Identities = 42/140 (30%), Positives = 76/140 (54%), Gaps = 7/140 (5%)

Query: 63  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 122
           ++TGA SG+G AAA A+++ G  V +V R+     E   +I + + +  +    VD+S  
Sbjct: 5   LITGANSGIGKAAALAIAKRGGTVHMVCRNQTRAEEARKEIETESGNQNIFLHIVDMSDP 64

Query: 123 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTK 182
           + V +F +  ++          + +LINNAG +     LT +G ++  +TN +G + LT 
Sbjct: 65  KQVWEFVEEFKE------EGKKLHVLINNAGCMVNKRELTEDGLEKNFATNTLGTYILTT 118

Query: 183 LLLPLLKNSPVPSRIVNVTS 202
            L+P+L+    P R++ V+S
Sbjct: 119 HLIPVLEKEEDP-RVITVSS 137

Classical SDR-like subgroup containing human DHRS-12/FLJ13639, the 36K protein of zebrafish CNS myelin, and related proteins. DHRS-12/FLJ13639 is expressed in neurons and oligodendrocytes in the human cerebral cortex. Proteins in this subgroup share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 255

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score = 81.9 bits (203), Expect = 6e-18
 Identities = 70/265 (26%), Positives = 116/265 (43%), Gaps = 43/265 (16%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVL-VGRSSHLLSETMADITSRNKDARLEAFQVDL 119
           V +VTGA+ G+G A A  L+R+G  VV+    S     E +A+I +     +  A Q D+
Sbjct: 5   VALVTGASRGIGRAIAKRLARDGASVVVNYASSKAAAEEVVAEIEA--AGGKAIAVQADV 62

Query: 120 SSFQSVLKFKDSLQQWLLDSDMHSS--IQLLINNAGI--LATSSRLTPEGYDQMMSTNYI 175
           S    V +        L D+   +   + +L+NNAG+      +  + E +D+M + N  
Sbjct: 63  SDPSQVAR--------LFDAAEKAFGGVDILVNNAGVMLKKPIAETSEEEFDRMFTVNTK 114

Query: 176 GAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIY 235
           GAFF+ +     L++     RI+N++S              ++T  +       P    Y
Sbjct: 115 GAFFVLQEAAKRLRDG---GRIINISS--------------SLTAAY------TPNYGAY 151

Query: 236 EYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLG 295
             SK  +  F+  L + LG    R ++V A  PG V T++     +  ++  +  +  LG
Sbjct: 152 AGSKAAVEAFTRVLAKELG---GRGITVNAVAPGPVDTDMFYAGKTEEAVEGYAKMSPLG 208

Query: 296 LLQSPEKGINSVLDAALAPPETSGV 320
            L  PE     V  A LA P+   V
Sbjct: 209 RLGEPEDIAPVV--AFLASPDGRWV 231

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score = 81.6 bits (202), Expect = 7e-18
 Identities = 56/216 (25%), Positives = 102/216 (47%), Gaps = 38/216 (17%)

Query: 63  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 122
           ++TGA+SG+G A A   ++ G  ++L GR +  L E +AD        ++   Q+D+S  
Sbjct: 4   LITGASSGIGEATARRFAKAGAKLILTGRRAERLQE-LADELGAKFPVKVLPLQLDVSDR 62

Query: 123 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI---LATSSRLTPEGYDQMMSTNYIGAFF 179
           +S+    ++L       +    I +L+NNAG+   L  +     E ++ M+ TN  G   
Sbjct: 63  ESIEAALENL------PEEFRDIDILVNNAGLALGLDPAQEADLEDWETMIDTNVKGLLN 116

Query: 180 LTKLLLPLL--KNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEY 237
           +T+L+LP++  +N      I+N+ S               I G++      Y    +Y  
Sbjct: 117 VTRLILPIMIARNQ---GHIINLGS---------------IAGRYP-----YAGGNVYCA 153

Query: 238 SKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKT 273
           +K  +  FS  L ++L +     V+ I  +PG+V+T
Sbjct: 154 TKAAVRQFSLNLRKDL-IGTGIRVTNI--EPGLVET 186

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score = 80.4 bits (199), Expect = 2e-17
 Identities = 58/223 (26%), Positives = 88/223 (39%), Gaps = 40/223 (17%)

Query: 63  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 122
           ++TG TSG+G A A      G  V++ GR    L+E   ++ +      +    +D+   
Sbjct: 9   LITGGTSGIGLALARKFLEAGNTVIITGRREERLAEAKKELPN------IHTIVLDVGDA 62

Query: 123 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA----TSSRLTPEGYDQMMSTNYIGAF 178
           +SV        + LL    + ++ +LINNAGI             +  D  + TN IG  
Sbjct: 63  ESVEAL----AEALLSE--YPNLDILINNAGIQRPIDLRDPASDLDKADTEIDTNLIGPI 116

Query: 179 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYS 238
            L K  LP LK  P  + IVNV+S                 G  F+     P   +Y  +
Sbjct: 117 RLIKAFLPHLKKQP-EATIVNVSS-----------------GLAFVPMAANP---VYCAT 155

Query: 239 KLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS 281
           K  L  ++  L   L   K   V V+   P  V T +  E  +
Sbjct: 156 KAALHSYTLALRHQL---KDTGVEVVEIVPPAVDTELHEERRN 195

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 80.3 bits (199), Expect = 2e-17
 Identities = 61/227 (26%), Positives = 96/227 (42%), Gaps = 49/227 (21%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHL----LSETMADITSRNKDARLEAFQ 116
           V IVTGA+ G+G A A  L++EG  VV+   +  +      E + +I     DA   A +
Sbjct: 7   VAIVTGASGGIGRAIAELLAKEGAKVVI---AYDINEEAAQELLEEIKEEGGDA--IAVK 61

Query: 117 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI----LATSSRLTPEGYDQMMST 172
            D+SS + V    + +       +    I +L+NNAGI    L T   +T E +D+++  
Sbjct: 62  ADVSSEEDVENLVEQI------VEKFGKIDILVNNAGISNFGLVTD--MTDEEWDRVIDV 113

Query: 173 NYIGAFFLTKLLLPLL--KNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYP 230
           N  G   LT+  LP +  + S V   IVN++S                            
Sbjct: 114 NLTGVMLLTRYALPYMIKRKSGV---IVNISS----------------IWGLI--GA--S 150

Query: 231 CARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMR 277
           C  +Y  SK  +  F+  L + L     R V+ +A  PG + T +  
Sbjct: 151 CEVLYSASKGAVNAFTKALAKELAPSGIR-VNAVA--PGAIDTEMWS 194

Length = 247

>gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional

 Score = 80.5 bits (199), Expect = 3e-17
 Identities = 56/220 (25%), Positives = 93/220 (42%), Gaps = 33/220 (15%)

Query: 58  KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQV 117
            + + IVTGA+SG G      L+++G+ V+   R+       ++  T  N    ++  Q+
Sbjct: 2   NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQL 61

Query: 118 DLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATS--SRLTPEGYDQMMSTNYI 175
           D++   S+  F+  L++          I LL+NNAG         +  E Y +   TN  
Sbjct: 62  DVTDQNSIHNFQLVLKE-------IGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVF 114

Query: 176 GAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIY 235
           GA  +T+ +LP ++      +I+N++S               I+G+       +P    Y
Sbjct: 115 GAISVTQAVLPYMRKQK-SGKIINISS---------------ISGRV-----GFPGLSPY 153

Query: 236 EYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNI 275
             SK  L  FS  L   L   K   + V   +PG   TNI
Sbjct: 154 VSSKYALEGFSESLRLEL---KPFGIDVALIEPGSYNTNI 190

Length = 280

>gnl|CDD|200089 TIGR01289, LPOR, light-dependent protochlorophyllide reductase

 Score = 81.1 bits (200), Expect = 3e-17
 Identities = 65/220 (29%), Positives = 98/220 (44%), Gaps = 42/220 (19%)

Query: 58  KRPVCIVTGATSGLGAAAAYALSREG-FHVVLVGRSSHLLSETMADITSRNKDARLEAFQ 116
           ++P  I+TGA+SGLG  AA AL+  G +HV++  R   L +E  A      KD+      
Sbjct: 2   QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRD-FLKAEQAAKSLGMPKDS-YTIMH 59

Query: 117 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI---LATSSRLTPEGYDQMMSTN 173
           +DL S  SV +F    ++          +  L+ NA +    A   R T +G++  + TN
Sbjct: 60  LDLGSLDSVRQFVQQFRE------SGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTN 113

Query: 174 YIGAFFLTKLLLPLLKNSPVPS-RIVNVTSFTHRNVFNAQVNNETITGKF---------- 222
           ++G F L  LLL  LKNSP    R++ V S T         N  T+ G            
Sbjct: 114 HLGHFLLCNLLLDDLKNSPNKDKRLIIVGSIT--------GNTNTLAGNVPPKANLGDLS 165

Query: 223 -----------FLRSKCYPCARIYEYSKLCLLIFSYELHR 251
                       +  K +  A+ Y+ SK+C ++   ELHR
Sbjct: 166 GLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHR 205

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]. Length = 314

>gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11

 Score = 79.4 bits (196), Expect = 4e-17
 Identities = 62/225 (27%), Positives = 94/225 (41%), Gaps = 38/225 (16%)

Query: 58  KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDA-RLEAFQ 116
              V I+TG++SG+GA  A   +R G  + L GR +  L ET            ++    
Sbjct: 2   SGKVAIITGSSSGIGAGTAILFARLGARLALTGRDAERLEETRQSCLQAGVSEKKILLVV 61

Query: 117 VDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTN 173
            DL+  +   +    +L ++         + +L+NNAGILA         E YD++M+ N
Sbjct: 62  ADLTEEEGQDRIISTTLAKF-------GRLDILVNNAGILAKGGGEDQDIEEYDKVMNLN 114

Query: 174 YIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCAR 233
                +LTKL +P L  +     IVNV+S               + G    RS  +P   
Sbjct: 115 LRAVIYLTKLAVPHLIKT--KGEIVNVSS---------------VAGG---RS--FPGVL 152

Query: 234 IYEYSKLCLLIFSYELHRNLGLDKSRH-VSVIAADPGVVKTNIMR 277
            Y  SK  L  F+    R   L+ +   V V +  PGV+ T   R
Sbjct: 153 YYCISKAALDQFT----RCTALELAPKGVRVNSVSPGVIVTGFHR 193

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253

>gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional

 Score = 79.0 bits (195), Expect = 8e-17
 Identities = 48/152 (31%), Positives = 80/152 (52%), Gaps = 19/152 (12%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V +VTGA+SGLGA  A  L++ G  VVL  R    L E  A+I +    A      +D++
Sbjct: 11  VALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAA--HVVSLDVT 68

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL---TPEGYDQMMSTNYIGA 177
            +QS+   K ++     +++   +I +L+NN+G+ +T+ +L   TP  +D +  TN  GA
Sbjct: 69  DYQSI---KAAVAH--AETEA-GTIDILVNNSGV-STTQKLVDVTPADFDFVFDTNTRGA 121

Query: 178 FFLT----KLLLPLLKNSP---VPSRIVNVTS 202
           FF+     K ++   K +       RI+N+ S
Sbjct: 122 FFVAQEVAKRMIARAKGAGNTKPGGRIINIAS 153

Length = 258

>gnl|CDD|183718 PRK12746, PRK12746, short chain dehydrogenase; Provisional

 Score = 78.2 bits (192), Expect = 1e-16
 Identities = 67/218 (30%), Positives = 99/218 (45%), Gaps = 31/218 (14%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVL-VGRSSHLLSETMADITSRNKDARLEAFQVDL 119
           V +VTGA+ G+G A A  L+ +G  V +  GR+     ET+ +I S    A L   + DL
Sbjct: 8   VALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFL--IEADL 65

Query: 120 SSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGA 177
           +S   V K  + L+  L      S I +L+NNAGI    T    T E +D++M+ N    
Sbjct: 66  NSIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAP 125

Query: 178 FFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEY 237
           FFL +  LPLL+      R++N++S   R  F   +                     Y  
Sbjct: 126 FFLIQQTLPLLR---AEGRVINISSAEVRLGFTGSI--------------------AYGL 162

Query: 238 SKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNI 275
           SK  L   +  L ++LG    R ++V    PG  KT+I
Sbjct: 163 SKGALNTMTLPLAKHLG---ERGITVNTIMPGYTKTDI 197

Length = 254

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 80.8 bits (200), Expect = 1e-16
 Identities = 49/152 (32%), Positives = 72/152 (47%), Gaps = 25/152 (16%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V ++TGA+SG+G A A  ++  G  V LV R+   L E +A+I  R K     A+  DL+
Sbjct: 373 VVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEI--RAKGGTAHAYTCDLT 430

Query: 121 SFQSVLKF-KDSLQQWLLDSDMHSSIQLLINNAG------ILATSSRLTPEGYDQMMSTN 173
              +V    KD L +       H  +  L+NNAG      +  ++ R     Y++ M+ N
Sbjct: 431 DSAAVDHTVKDILAE-------HGHVDYLVNNAGRSIRRSVENSTDRF--HDYERTMAVN 481

Query: 174 YIGAFFLTKLLLPLLKNSPVPSR---IVNVTS 202
           Y GA  L   LLP         R   +VNV+S
Sbjct: 482 YFGAVRLILGLLP----HMRERRFGHVVNVSS 509

Length = 657

>gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

 Score = 77.2 bits (191), Expect = 3e-16
 Identities = 63/225 (28%), Positives = 90/225 (40%), Gaps = 49/225 (21%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V I+TGA+SG+G   AY L+R G  +VL  R    L E  ++              +D+S
Sbjct: 5   VVIITGASSGIGEELAYHLARLGARLVLSARREERLEEVKSECLELG-APSPHVVPLDMS 63

Query: 121 SFQSVLKF-KDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYD---QMMSTNYIG 176
             +   +  +++L+ +         + +LINNAGI +  S       D   ++M  NY G
Sbjct: 64  DLEDAEQVVEEALKLF-------GGLDILINNAGI-SMRSLFHDTSIDVDRKIMEVNYFG 115

Query: 177 AFFLTKLLLPLLKNSPVPSR--IVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARI 234
              LTK  LP L      S+  IV V+S               I GK        P    
Sbjct: 116 PVALTKAALPHLIER---SQGSIVVVSS---------------IAGKI-----GVPFRTA 152

Query: 235 YEYSKLCLLIFS----YELHRNLGLDKSRHVSVIAADPGVVKTNI 275
           Y  SK  L  F      EL          ++SV    PG++ TNI
Sbjct: 153 YAASKHALQGFFDSLRAELS-------EPNISVTVVCPGLIDTNI 190

Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score = 75.4 bits (186), Expect = 1e-15
 Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 11/146 (7%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V +VT A+SG+G A A AL+REG  V +  R+   L    +++  R   A + A   DL+
Sbjct: 3   VALVTAASSGIGLAIARALAREGARVAICARNRENLERAASEL--RAGGAGVLAVVADLT 60

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAG--ILATSSRLTPEGYDQMMSTNYIGAF 178
             + + +    +++     D    + +L+NNAG       + LT E + +      +   
Sbjct: 61  DPEDIDRL---VEKAG---DAFGRVDILVNNAGGPPPGPFAELTDEDWLEAFDLKLLSVI 114

Query: 179 FLTKLLLPLLKNSPVPSRIVNVTSFT 204
            + + +LP +K      RIVN++S T
Sbjct: 115 RIVRAVLPGMKERGWG-RIVNISSLT 139

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|177654 PLN00015, PLN00015, protochlorophyllide reductase

 Score = 76.3 bits (188), Expect = 1e-15
 Identities = 67/215 (31%), Positives = 101/215 (46%), Gaps = 40/215 (18%)

Query: 63  IVTGATSGLGAAAAYALSREG-FHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSS 121
           I+TGA+SGLG A A AL+  G +HVV+  R   L +E  A      KD+      +DL+S
Sbjct: 1   IITGASSGLGLATAKALAETGKWHVVMACRD-FLKAERAAKSAGMPKDS-YTVMHLDLAS 58

Query: 122 FQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAF 178
             SV +F D+ ++    S     + +L+ NA +    A     T +G++  + TN++G F
Sbjct: 59  LDSVRQFVDNFRR----SGR--PLDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHF 112

Query: 179 FLTKLLLPLLKNSPVPS-RIVNVTSFTHR------NV---------------FNAQVNNE 216
            L++LLL  LK S  PS R++ V S T        NV                N   ++ 
Sbjct: 113 LLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGLAGGLNGLNSSA 172

Query: 217 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHR 251
            I G  F  +K       Y+ SK+C ++   E HR
Sbjct: 173 MIDGGEFDGAKA------YKDSKVCNMLTMQEFHR 201

Length = 308

>gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional

 Score = 75.9 bits (187), Expect = 2e-15
 Identities = 50/165 (30%), Positives = 65/165 (39%), Gaps = 24/165 (14%)

Query: 33  QLLFQNLFPRKSNPYKRCVPPITGI----KRPVCIVTGATSGLGAAAAYALSREGFHVVL 88
           QL    + P  S       PP   +    KR   ++TGA+SG+G AAA   +R G  VV 
Sbjct: 12  QLTLAGMRPPISPQLLINRPPRQPVDLTGKR--ILLTGASSGIGEAAAEQFARRGATVVA 69

Query: 89  VGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLL 148
           V R   LL      IT    DA   A   DLS   +V    D+L   +        + +L
Sbjct: 70  VARREDLLDAVADRITRAGGDAM--AVPCDLSDLDAV----DALVADVEKR--IGGVDIL 121

Query: 149 INNAGILATSSRLTPE-------GYDQMMSTNYIGAFFLTKLLLP 186
           INNAG    S R             ++ M  NY     L + L P
Sbjct: 122 INNAG---RSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAP 163

Length = 293

>gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional

 Score = 75.4 bits (186), Expect = 2e-15
 Identities = 43/142 (30%), Positives = 67/142 (47%), Gaps = 13/142 (9%)

Query: 63  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 122
           ++TGA+ G+G A A AL+  G  ++LVGR++  L    A +       R      DL+S 
Sbjct: 9   LLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLP---YPGRHRWVVADLTSE 65

Query: 123 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGAFFL 180
                     ++          I +LINNAG+   A      PE  +++++ N      L
Sbjct: 66  AGREAVLARARE-------MGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQL 118

Query: 181 TKLLLPLLKNSPVPSRIVNVTS 202
           T+ LLPLL+  P  + +VNV S
Sbjct: 119 TRALLPLLRAQPS-AMVVNVGS 139

Length = 263

>gnl|CDD|180753 PRK06924, PRK06924, short chain dehydrogenase; Provisional

 Score = 74.7 bits (184), Expect = 2e-15
 Identities = 64/251 (25%), Positives = 104/251 (41%), Gaps = 43/251 (17%)

Query: 63  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 122
           I+TG + GLG A A  L  +G HV+ + R+ +     +A+      ++ L    +DL   
Sbjct: 5   IITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQ----YNSNLTFHSLDLQDV 60

Query: 123 QSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL---TPEGYDQMMSTNYIGAF 178
             +   F + L     D+   SSI  LINNAG++A    +     E     +  N +   
Sbjct: 61  HELETNFNEILSSIQEDNV--SSI-HLINNAGMVAPIKPIEKAESEELITNVHLNLLAPM 117

Query: 179 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYS 238
            LT   +   K+  V  R++N++S   +N                     Y     Y  S
Sbjct: 118 ILTSTFMKHTKDWKVDKRVINISSGAAKNP--------------------YFGWSAYCSS 157

Query: 239 KLCLLIFSYELHRNLGL---DKSRHVSVIAADPGVVKTNIMREVPS-----FLSLMAFTV 290
           K  L +F+    + +     ++   V ++A  PGV+ TN+  ++ S     F +L  F  
Sbjct: 158 KAGLDMFT----QTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFIT 213

Query: 291 LKLLGLLQSPE 301
           LK  G L SPE
Sbjct: 214 LKEEGKLLSPE 224

Length = 251

>gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR

 Score = 74.8 bits (184), Expect = 2e-15
 Identities = 47/157 (29%), Positives = 70/157 (44%), Gaps = 24/157 (15%)

Query: 59  RPVCIVTGATSGLGAAAAYALSREGFHVVLV-GRSSHLLSETMADITSRNKDARLEAFQV 117
           RPV IVTGA+ G+G A A  L+  GF + +         +E +A++       R   FQ 
Sbjct: 1   RPVAIVTGASRGIGRAIATELAARGFDIAINDLPDDDQATEVVAEV--LAAGRRAIYFQA 58

Query: 118 DLSSFQSVLKFKDSLQQWLLD---SDMHSSIQLLINNAGILATSSR----LTPEGYDQMM 170
           D+           S  + LLD    D    +  L+NNAGI          LT + +D+++
Sbjct: 59  DIGEL--------SDHEALLDQAWEDFG-RLDCLVNNAGIAVRPRGDLLDLTEDSFDRLI 109

Query: 171 STNYIGAFFLT----KLLLPLLKNSPVPSR-IVNVTS 202
           + N  G FFLT    + ++        P R I+ VTS
Sbjct: 110 AINLRGPFFLTQAVARRMVEQPDRFDGPHRSIIFVTS 146

This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score = 74.2 bits (183), Expect = 3e-15
 Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 43/226 (19%)

Query: 62  CIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSS 121
            +VTGA+ G+G A A  L++EG  V++  RSS   +E + +   +    +      D+S 
Sbjct: 1   ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVE-ELKAYGVKALGVVCDVSD 59

Query: 122 FQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI----LATSSRLTPEGYDQMMSTNYIGA 177
            + V    + ++      +    I +L+NNAGI    L    R+  E +D ++ TN  G 
Sbjct: 60  REDVKAVVEEIE------EELGPIDILVNNAGITRDNLLM--RMKEEDWDAVIDTNLTGV 111

Query: 178 FFLTKLLL-PLLKNSPVPSRIVNVTSFT--HRNVFNAQVNNETITGKFFLRSKCYPCARI 234
           F LT+ +L  ++K      RI+N++S      N    Q N                    
Sbjct: 112 FNLTQAVLRIMIKQR--SGRIINISSVVGLMGNA--GQAN-------------------- 147

Query: 235 YEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP 280
           Y  SK  ++ F+  L + L    SR+++V A  PG + T++  ++ 
Sbjct: 148 YAASKAGVIGFTKSLAKELA---SRNITVNAVAPGFIDTDMTDKLS 190

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score = 74.1 bits (182), Expect = 3e-15
 Identities = 53/215 (24%), Positives = 85/215 (39%), Gaps = 34/215 (15%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V +VTGA+SG+G A A AL+ EG  V +  R    L     ++ +     +    ++D++
Sbjct: 5   VALVTGASSGIGEATARALAAEGAAVAIAARRVDRLEALADELEAEG--GKALVLELDVT 62

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGAF 178
             Q V    +   + L        + +L+NNAGI  L          + +M+ TN +G  
Sbjct: 63  DEQQVDAAVERTVEAL------GRLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLM 116

Query: 179 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYS 238
           + T   LP          IVN++S   R                         + +Y  +
Sbjct: 117 YTTHAALPHHLLRNK-GTIVNISSVAGRVA--------------------VRNSAVYNAT 155

Query: 239 KLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKT 273
           K  +  FS  L + +     R V VI  +PG V T
Sbjct: 156 KFGVNAFSEGLRQEVTERGVR-VVVI--EPGTVDT 187

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR

 Score = 73.0 bits (180), Expect = 7e-15
 Identities = 38/147 (25%), Positives = 62/147 (42%), Gaps = 9/147 (6%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V  +TG  +G+G A A A +  G  V + GR   +L     +I+S     R    Q D+ 
Sbjct: 5   VAFITGGGTGIGKAIAKAFAELGASVAIAGRKPEVLEAAAEEISS-ATGGRAHPIQCDVR 63

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAG--ILATSSRLTPEGYDQMMSTNYIGAF 178
             ++V    D              I +LINNA    LA +  L+P G+  ++  +  G F
Sbjct: 64  DPEAVEAAVDETL------KEFGKIDILINNAAGNFLAPAESLSPNGFKTVIDIDLNGTF 117

Query: 179 FLTKLLLPLLKNSPVPSRIVNVTSFTH 205
             TK +   L  +     I+N+++   
Sbjct: 118 NTTKAVGKRLIEAKHGGSILNISATYA 144

TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249

>gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

 Score = 73.2 bits (180), Expect = 7e-15
 Identities = 61/245 (24%), Positives = 98/245 (40%), Gaps = 41/245 (16%)

Query: 63  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 122
           ++TG  SG+G A A      G  V++ GR+   L+E  A+         +     D++  
Sbjct: 9   LITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPE------IHTEVCDVADR 62

Query: 123 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA----TSSRLTPEGYDQMMSTNYIGAF 178
            S       L +WL     + ++ +LINNAGI      T +    +  +Q ++TN +   
Sbjct: 63  DSR----RELVEWLKKE--YPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPI 116

Query: 179 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYS 238
            LT LLLP L   P  + I+NV+S                 G  F+     P   +Y  +
Sbjct: 117 RLTALLLPHLLRQP-EATIINVSS-----------------GLAFVPMASTP---VYCAT 155

Query: 239 KLCLLIFSYELHRNLGLDKSRHVSVIA-ADPGVVKTNIMREVPSFLSLMAFTVLKLLGLL 297
           K  +  ++  L   L   K   V VI  A P V  T    +    + L AF       + 
Sbjct: 156 KAAIHSYTLALREQL---KDTSVEVIELAPPLVDTTEGNTQARGKMPLSAFISETEDLVQ 212

Query: 298 QSPEK 302
            +P++
Sbjct: 213 NTPDR 217

Length = 245

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score = 71.6 bits (176), Expect = 2e-14
 Identities = 44/152 (28%), Positives = 69/152 (45%), Gaps = 15/152 (9%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V ++TG + G+G A A AL  EG+ V +  R    L E  A++   N    +     D+ 
Sbjct: 8   VALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAEL---NNKGNVLGLAADVR 64

Query: 121 SFQSVLKFKDSL-QQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGA 177
               V +  D++   +         + +LI NAG+   A    LTPE +  ++ TN  GA
Sbjct: 65  DEADVQRAVDAIVAAF-------GGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGA 117

Query: 178 FFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVF 209
           F+  K  +P LK       I+N++S    N F
Sbjct: 118 FYTIKAAVPALKRG--GGYIINISSLAGTNFF 147

Length = 237

>gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional

 Score = 71.5 bits (176), Expect = 2e-14
 Identities = 45/155 (29%), Positives = 75/155 (48%), Gaps = 13/155 (8%)

Query: 58  KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQV 117
             P  ++TGA+SG+G A A A ++ G+ + LV RS   L E +A    R+   +  A+ +
Sbjct: 5   SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDAL-EALAAEL-RSTGVKAAAYSI 62

Query: 118 DLSSFQSVL-KFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL-TP-EGYDQMMSTNY 174
           DLS+ +++     + L+Q+           +LINNAG+  T   L  P   +  ++  N 
Sbjct: 63  DLSNPEAIAPGIAELLEQFGC-------PDVLINNAGMAYTGPLLEMPLSDWQWVIQLNL 115

Query: 175 IGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVF 209
              F     +LP ++       I+NV+S   RN F
Sbjct: 116 TSVFQCCSAVLPGMRARG-GGLIINVSSIAARNAF 149

Length = 241

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score = 71.6 bits (176), Expect = 3e-14
 Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 13/143 (9%)

Query: 63  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 122
           +VTG  SG+G A A A +  G  V +   S   L+ T A    R   A++ A   D++  
Sbjct: 15  LVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAA----RLPGAKVTATVADVADP 70

Query: 123 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSR---LTPEGYDQMMSTNYIGAFF 179
             V +  D+  +     D      +L+NNAGI   +     +TPE ++Q ++ N  G F+
Sbjct: 71  AQVERVFDTAVERFGGLD------VLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFY 124

Query: 180 LTKLLLPLLKNSPVPSRIVNVTS 202
             +  +PLLK S     I+ ++S
Sbjct: 125 FARAAVPLLKASGHGGVIIALSS 147

Length = 264

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score = 70.8 bits (174), Expect = 4e-14
 Identities = 35/144 (24%), Positives = 67/144 (46%), Gaps = 11/144 (7%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V +VTGA+ G+G   A  L+  G ++V+  R+     E    I     +A   AF  D+S
Sbjct: 7   VALVTGASRGIGFGIASGLAEAGANIVINSRNEEKAEEAQQLIEKEGVEAT--AFTCDVS 64

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGAF 178
             +++   K +++   ++ D    I +L+NNAGI     +       +  ++  N  G F
Sbjct: 65  DEEAI---KAAVEA--IEEDF-GKIDILVNNAGIIRRHPAEEFPEAEWRDVIDVNLNGVF 118

Query: 179 FLTKLLLPLLKNSPVPSRIVNVTS 202
           F+++ +   +       +I+N+ S
Sbjct: 119 FVSQAVARHMIKQGHG-KIINICS 141

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score = 70.4 bits (173), Expect = 5e-14
 Identities = 62/271 (22%), Positives = 108/271 (39%), Gaps = 52/271 (19%)

Query: 60  PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDL 119
            V I+TG  SG+G A A  L ++G  V ++ R  +      A++ + N   +    Q D+
Sbjct: 1   KVAIITGGASGIGLATAKLLLKKGAKVAILDR--NENPGAAAELQAINPKVKATFVQCDV 58

Query: 120 SSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS----RLTPEGYDQMMSTNY 174
           +S++ +   FK ++       +    + +LINNAGIL   S       P  +++ +  N 
Sbjct: 59  TSWEQLAAAFKKAI-------EKFGRVDILINNAGILDEKSYLFAGKLPPPWEKTIDVNL 111

Query: 175 IGAFFLTKLLLPLLK--NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCA 232
            G    T L L  +          IVN+ S               + G        YP  
Sbjct: 112 TGVINTTYLALHYMDKNKGGKGGVIVNIGS---------------VAG-------LYPAP 149

Query: 233 R--IYEYSKLCLLIFSYELHRNLG-LDKSRH-VSVIAADPGVVKTNIMREVPSFLSLMAF 288
           +  +Y  SK  ++ F+    R+L  L + +  V V A  PG   T ++ ++ +  + M  
Sbjct: 150 QFPVYSASKHGVVGFT----RSLADLLEYKTGVRVNAICPGFTNTPLLPDLVAKEAEML- 204

Query: 289 TVLKLLGLLQSPEKGINSVLDAALAPPETSG 319
                    QSPE  +   +   +   E +G
Sbjct: 205 ----PSAPTQSPEV-VAKAIVYLIEDDEKNG 230

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score = 70.6 bits (173), Expect = 6e-14
 Identities = 41/142 (28%), Positives = 62/142 (43%), Gaps = 10/142 (7%)

Query: 63  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 122
           +VTG T G+G A    L+  G  V    R+   L E + +   +      E    D+SS 
Sbjct: 10  LVTGGTKGIGYAIVEELAGLGAEVYTCARNQKELDECLTEWREKGFKV--EGSVCDVSSR 67

Query: 123 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL--TPEGYDQMMSTNYIGAFFL 180
                 +  L   +        + +L+NNAG          T E Y  +MSTN+  A+ L
Sbjct: 68  SE----RQELMDTVASH-FGGKLNILVNNAGTNIRKEAKDYTEEDYSLIMSTNFEAAYHL 122

Query: 181 TKLLLPLLKNSPVPSRIVNVTS 202
           ++L  PLLK S   + IV ++S
Sbjct: 123 SRLAHPLLKASGNGN-IVFISS 143

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score = 69.6 bits (171), Expect = 1e-13
 Identities = 33/144 (22%), Positives = 64/144 (44%), Gaps = 11/144 (7%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           + ++TG  SG+G   A   ++ G  VV++  +     ET      R    ++  ++ D+S
Sbjct: 1   IVLITGGGSGIGRLLALEFAKRGAKVVILDINEKGAEETAN--NVRKAGGKVHYYKCDVS 58

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAF 178
             + V +    +++ + D      + +LINNAG+++      L  E  ++    N +  F
Sbjct: 59  KREEVYEAAKKIKKEVGD------VTILINNAGVVSGKKLLELPDEEIEKTFEVNTLAHF 112

Query: 179 FLTKLLLPLLKNSPVPSRIVNVTS 202
           + TK  LP +        IV + S
Sbjct: 113 WTTKAFLPDMLERNHGH-IVTIAS 135

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 69.3 bits (170), Expect = 1e-13
 Identities = 40/150 (26%), Positives = 75/150 (50%), Gaps = 15/150 (10%)

Query: 57  IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQ 116
           ++    ++TGA  G+G A A AL++EG +V L+ R+   L     ++       ++    
Sbjct: 5   LQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEV--EAYGVKVVIAT 62

Query: 117 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNY 174
            D+S ++ V    + L+  L       SI +LINNAGI        L P  +++++  N 
Sbjct: 63  ADVSDYEEVTAAIEQLKNEL------GSIDILINNAGISKFGKFLELDPAEWEKIIQVNL 116

Query: 175 IGAFFLTKLLLPLL--KNSPVPSRIVNVTS 202
           +G ++ T+ +LP +  + S     I+N++S
Sbjct: 117 MGVYYATRAVLPSMIERQS---GDIINISS 143

Length = 239

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score = 69.7 bits (171), Expect = 1e-13
 Identities = 35/144 (24%), Positives = 59/144 (40%), Gaps = 11/144 (7%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
             +VTGA SG+G A A AL+  G +VV+                       +     D++
Sbjct: 3   TALVTGAASGIGLAIARALAAAGANVVVNDFGEEGAEAAAKVAGDAG--GSVIYLPADVT 60

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGAF 178
               +    D +      +     + +L+NNAGI  +A      PE +D++++     AF
Sbjct: 61  KEDEI---ADMIAA---AAAEFGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAVMLTSAF 114

Query: 179 FLTKLLLPLLKNSPVPSRIVNVTS 202
              +  LP +K      RI+N+ S
Sbjct: 115 HTIRAALPHMKKQGW-GRIINIAS 137

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score = 68.9 bits (169), Expect = 2e-13
 Identities = 62/276 (22%), Positives = 104/276 (37%), Gaps = 54/276 (19%)

Query: 63  IVTGATSGLGAA-AAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSS 121
           ++TGA+ G+G       L+R    V+   R     +E +A + +    +RL   ++D++ 
Sbjct: 2   LITGASRGIGLELVRQLLARGNNTVIATCRDPSAATE-LAALGA--SHSRLHILELDVTD 58

Query: 122 --FQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL---TPEGYDQMMSTNYIG 176
              +S     + L    LD        +LINNAGIL +         E   ++   N +G
Sbjct: 59  EIAESAEAVAERLGDAGLD--------VLINNAGILHSYGPASEVDSEDLLEVFQVNVLG 110

Query: 177 AFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYE 236
              LT+  LPLL      ++I+N++S                +         Y     Y 
Sbjct: 111 PLLLTQAFLPLLLKG-ARAKIINISS-------------RVGSIGDNTSGGWYS----YR 152

Query: 237 YSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGL 296
            SK  L + +  L   L   K   ++V++  PG V+T++                K  G 
Sbjct: 153 ASKAALNMLTKSLAVEL---KRDGITVVSLHPGWVRTDMGGPFA-----------KNKGP 198

Query: 297 LQSPE--KGINSVLDAALAPPETSGVYFFGGKGRTV 330
           +   E   G+  V+D      E SG  F    G  +
Sbjct: 199 ITPEESVAGLLKVIDNLN--EEDSG-KFLDYDGTEI 231

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 70.6 bits (173), Expect = 2e-13
 Identities = 50/225 (22%), Positives = 86/225 (38%), Gaps = 38/225 (16%)

Query: 58  KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQV 117
           +  V +VTGA  G+G AA    +R G  VV+  R+     E    +   +      A  +
Sbjct: 4   QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHH-----ALAM 58

Query: 118 DLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLT----PEGYDQMMSTN 173
           D+S    + +  + L +          I +L+NNAG+   +   T     E + ++ + N
Sbjct: 59  DVSDEAQIREGFEQLHR------EFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAIN 112

Query: 174 YIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCAR 233
             GA+ + +  L L+      + IVNV S          V                P   
Sbjct: 113 LTGAYLVAREALRLMIEQGHGAAIVNVASGA------GLVAL--------------PKRT 152

Query: 234 IYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE 278
            Y  SK  ++  +  L        ++ + V A  PG V+T ++ E
Sbjct: 153 AYSASKAAVISLTRSLACEWA---AKGIRVNAVLPGYVRTQMVAE 194

Length = 520

>gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs

 Score = 68.7 bits (168), Expect = 3e-13
 Identities = 63/259 (24%), Positives = 104/259 (40%), Gaps = 32/259 (12%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V +VTGA+ G+GAA A AL + G  VV   R    +    A+  S      L  +Q DLS
Sbjct: 8   VALVTGASVGIGAAVARALVQHGMKVVGCARRVDKIEALAAECQSAGYPT-LFPYQCDLS 66

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLT--PEGYDQMMSTNYIGAF 178
           + + +L    S+   +     H  + + INNAG+      L+   EG+ +M   N +   
Sbjct: 67  NEEQIL----SMFSAI--RTQHQGVDVCINNAGLARPEPLLSGKTEGWKEMFDVNVLALS 120

Query: 179 FLTKLLLPLLKNSPVP-SRIVNVTSFT-HRNVFNAQVNNETITGKFFLRSKCYPCARIYE 236
             T+     +K   V    I+N+ S + HR    +  +       F+        A  + 
Sbjct: 121 ICTREAYQSMKERNVDDGHIININSMSGHRVPPVSVFH-------FY-------AATKHA 166

Query: 237 YSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGL 296
            + L   +   EL      +   H+   +  PG+V+T    ++       A    + +  
Sbjct: 167 VTALTEGL-RQELR-----EAKTHIRATSISPGLVETEFAFKLHDNDPEKAAATYESIPC 220

Query: 297 LQSPEKGINSVLDAALAPP 315
           L+ PE   N+VL     PP
Sbjct: 221 LK-PEDVANAVLYVLSTPP 238

Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12

 Score = 67.5 bits (165), Expect = 6e-13
 Identities = 41/145 (28%), Positives = 61/145 (42%), Gaps = 15/145 (10%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V IVTGA +G+GAA A  L+REG  VV+            A            A +VD++
Sbjct: 5   VAIVTGAGAGIGAACAARLAREGARVVVADIDG-----GAAQAVVAQIAGGALALRVDVT 59

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL---TPEGYDQMMSTNYIGA 177
             Q V    +   +          + LL+NNAG +  +  +       +DQ M+ N  G 
Sbjct: 60  DEQQVAALFERAVE------EFGGLDLLVNNAGAMHLTPAIIDTDLAVWDQTMAINLRGT 113

Query: 178 FFLTKLLLPLLKNSPVPSRIVNVTS 202
           F   +   P +      S IVN++S
Sbjct: 114 FLCCRHAAPRMIARGGGS-IVNLSS 137

These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246

>gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional

 Score = 67.4 bits (165), Expect = 6e-13
 Identities = 38/146 (26%), Positives = 64/146 (43%), Gaps = 15/146 (10%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V +VTG+  GLG   A AL+  G HV++ GR++  L   +A +  R      EA   D++
Sbjct: 13  VALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAAL--RAAGGAAEALAFDIA 70

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSR----LTPEGYDQMMSTNYIG 176
             ++V      +         H  + +L+NN G  A   R    L       ++ T+ + 
Sbjct: 71  DEEAVAAAFARID------AEHGRLDILVNNVG--ARDRRPLAELDDAAIRALLETDLVA 122

Query: 177 AFFLTKLLLPLLKNSPVPSRIVNVTS 202
              L++L    +K      RI+ +TS
Sbjct: 123 PILLSRLAAQRMK-RQGYGRIIAITS 147

Length = 256

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 67.2 bits (165), Expect = 8e-13
 Identities = 58/221 (26%), Positives = 92/221 (41%), Gaps = 36/221 (16%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V IVTGA+SG+G   A   + EG  VV+  R+        A+I +     R  A   D+S
Sbjct: 7   VAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA---GGRAIAVAADVS 63

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI-LATSSRL--TPEGYDQMMSTNYIGA 177
               V   + ++   L   +   S+ +L+NNAG        L      +D++ + N    
Sbjct: 64  DEADV---EAAVAAAL---ERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSP 117

Query: 178 FFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEY 237
           +  T+  +P ++     + IVNV S                 G   LR +  P    Y  
Sbjct: 118 YLWTQAAVPAMRGEGGGA-IVNVAS---------------TAG---LRPR--PGLGWYNA 156

Query: 238 SKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE 278
           SK  ++  +  L   LG DK R V+ +A  P VV+T ++  
Sbjct: 157 SKGAVITLTKALAAELGPDKIR-VNAVA--PVVVETGLLEA 194

Length = 251

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score = 67.4 bits (165), Expect = 8e-13
 Identities = 33/124 (26%), Positives = 60/124 (48%), Gaps = 13/124 (10%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V +VTG  SG+G A A   + +G  V L+ R     SE +A++ ++      +    D+S
Sbjct: 17  VAVVTGGASGIGHAIAELFAAKGARVALLDR-----SEDVAEVAAQLLGGNAKGLVCDVS 71

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGAF 178
             QSV     ++            I +L+N+AG+  LA +  ++ E +D+ +  N  G+F
Sbjct: 72  DSQSVEAAVAAVIS------AFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSF 125

Query: 179 FLTK 182
            + +
Sbjct: 126 LMAQ 129

Length = 255

>gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional

 Score = 66.7 bits (163), Expect = 1e-12
 Identities = 44/144 (30%), Positives = 62/144 (43%), Gaps = 12/144 (8%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V IVTGA SG+G A A   +REG  VV+  R +       A I +     R  A Q D+ 
Sbjct: 7   VAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAA---GGRAFARQGDVG 63

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAG--ILATSSRLTPEGYDQMMSTNYIGAF 178
           S ++V    D +            + +L+NNAG     T        +D +M  N  G F
Sbjct: 64  SAEAVEALVDFVAA------RWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVF 117

Query: 179 FLTKLLLPLLKNSPVPSRIVNVTS 202
              K  +P+++     S IVN  S
Sbjct: 118 LWAKYAIPIMQRQGGGS-IVNTAS 140

Length = 252

>gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

 Score = 66.9 bits (164), Expect = 2e-12
 Identities = 61/222 (27%), Positives = 87/222 (39%), Gaps = 47/222 (21%)

Query: 63  IVTGATSGLGAAAAYALSREGFHV---VLVGRSSHLLSETMADITSRNKDARLEAFQVDL 119
           ++TG  SG G   A  L   GF V    L        ++ +  + S     RL   Q+D+
Sbjct: 4   LITGCDSGFGNLLAKKLDSLGFTVLAGCLTKNGPG--AKELRRVCS----DRLRTLQLDV 57

Query: 120 SSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS---RLTPEGYDQMMSTNYIG 176
           +  + + +      QW+ +      +  L+NNAGIL        L  + Y + M  N  G
Sbjct: 58  TKPEQIKR----AAQWVKEHVGEKGLWGLVNNAGILGFGGDEELLPMDDYRKCMEVNLFG 113

Query: 177 AFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYE 236
              +TK  LPLL+ +    R+VNV+S   R  F                    P    Y 
Sbjct: 114 TVEVTKAFLPLLRRA--KGRVVNVSSMGGRVPF--------------------PAGGAYC 151

Query: 237 YSKLCLLIFSYELHRNL---GLDKSRHVSVIAADPGVVKTNI 275
            SK  +  FS  L R L   G+     VS+I   PG  KT I
Sbjct: 152 ASKAAVEAFSDSLRRELQPWGV----KVSIIE--PGNFKTGI 187

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281

>gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated

 Score = 68.1 bits (167), Expect = 2e-12
 Identities = 56/224 (25%), Positives = 83/224 (37%), Gaps = 47/224 (20%)

Query: 63  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 122
           +VTGA SG+G   A A +REG  VV           T   I +    A   A++VD+S  
Sbjct: 319 VVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAG--AVAHAYRVDVSDA 376

Query: 123 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI------LATSSRLTPEGYDQMMSTNYIG 176
            ++  F + +         H    +++NNAGI      L T    + E +D+++  N  G
Sbjct: 377 DAMEAFAEWV------RAEHGVPDIVVNNAGIGMAGGFLDT----SAEDWDRVLDVNLWG 426

Query: 177 AFFLTKLLLPLLKNSPVPSRIVNVTS---FTHRNVFNAQVNNETITGKFFLRSKCYPCAR 233
                +L    +        IVNV S   +       A                      
Sbjct: 427 VIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSLPA---------------------- 464

Query: 234 IYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMR 277
            Y  SK  +L+ S  L   L    +  + V A  PG V TNI+ 
Sbjct: 465 -YATSKAAVLMLSECLRAELA---AAGIGVTAICPGFVDTNIVA 504

Length = 582

>gnl|CDD|183719 PRK12747, PRK12747, short chain dehydrogenase; Provisional

 Score = 66.3 bits (161), Expect = 2e-12
 Identities = 64/228 (28%), Positives = 104/228 (45%), Gaps = 31/228 (13%)

Query: 57  IKRPVCIVTGATSGLGAAAAYALSREGFHVVL-VGRSSHLLSETMADITSRNKDARLEAF 115
           +K  V +VTGA+ G+G A A  L+ +G  V +  G       ET+ +I S    A   + 
Sbjct: 2   LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAF--SI 59

Query: 116 QVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTN 173
             +L S   V     SL   L +    +   +LINNAGI   A     T + +D+M+S N
Sbjct: 60  GANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVN 119

Query: 174 YIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCAR 233
               FF+ +  L  L+++   SRI+N++S   R           I+   F+         
Sbjct: 120 AKAPFFIIQQALSRLRDN---SRIINISSAATR-----------ISLPDFI--------- 156

Query: 234 IYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS 281
            Y  +K  +   ++ L + LG   +R ++V A  PG +KT++  E+ S
Sbjct: 157 AYSMTKGAINTMTFTLAKQLG---ARGITVNAILPGFIKTDMNAELLS 201

Length = 252

>gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional

 Score = 66.9 bits (164), Expect = 2e-12
 Identities = 40/148 (27%), Positives = 66/148 (44%), Gaps = 11/148 (7%)

Query: 57  IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQ 116
           I R V ++TGA++G+G A A A +R G  VVL+ R    L    A+I +   +A   A  
Sbjct: 6   IGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEA--LAVV 63

Query: 117 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAG--ILATSSRLTPEGYDQMMSTNY 174
            D++  ++V    D  ++ L        I   +NNA   +      +TPE + ++    Y
Sbjct: 64  ADVADAEAVQAAADRAEEEL------GPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTY 117

Query: 175 IGAFFLTKLLLPLLKNSPVPSRIVNVTS 202
           +G    T   L  ++       I+ V S
Sbjct: 118 LGVVHGTLAALRHMRPR-DRGAIIQVGS 144

Length = 334

>gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional

 Score = 65.8 bits (161), Expect = 2e-12
 Identities = 39/145 (26%), Positives = 65/145 (44%), Gaps = 11/145 (7%)

Query: 61  VCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDL 119
           V +VTG T GLGAA A A +  G   +V+ GR++       A++ +    A     Q DL
Sbjct: 8   VALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVF--VQADL 65

Query: 120 SSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL--TPEGYDQMMSTNYIGA 177
           S  +     +  +       +    +  L+N AG+    + L  +PE +D+  + N    
Sbjct: 66  SDVEDC---RRVVAAAD---EAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAP 119

Query: 178 FFLTKLLLPLLKNSPVPSRIVNVTS 202
           FFL +  + L++       IVN+ S
Sbjct: 120 FFLMQEAIKLMRRRKAEGTIVNIGS 144

Length = 260

>gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs

 Score = 65.3 bits (160), Expect = 3e-12
 Identities = 53/225 (23%), Positives = 89/225 (39%), Gaps = 50/225 (22%)

Query: 62  CIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSS 121
            +VTGAT G+G A A  L++ GF+V+L+ R+   L     +I  +      +    D S+
Sbjct: 4   AVVTGATDGIGKAYAEELAKRGFNVILISRTQEKLDAVAKEIEEKYG-VETKTIAADFSA 62

Query: 122 FQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS----RLTPEGYDQMMSTNYIG 176
              + +  +  L+   LD      I +L+NN GI  +          +    +++ N + 
Sbjct: 63  GDDIYERIEKELEG--LD------IGILVNNVGISHSIPEYFLETPEDELQDIINVNVMA 114

Query: 177 AFFLTKLLLPLLKNSPVPSR----IVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCA 232
              +T+L+LP +       R    IVN++SF                          P  
Sbjct: 115 TLKMTRLILPGMV-----KRKKGAIVNISSFA----------------------GLIPTP 147

Query: 233 R--IYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNI 275
               Y  SK  L  FS  L+      KS+ + V +  P +V T +
Sbjct: 148 LLATYSASKAFLDFFSRALYEEY---KSQGIDVQSLLPYLVATKM 189

This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 65.3 bits (160), Expect = 4e-12
 Identities = 38/144 (26%), Positives = 67/144 (46%), Gaps = 11/144 (7%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V +VTGA SG+G   A AL++EG  VV+   +    +     +      A      +D++
Sbjct: 6   VALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAI--GVAMDVT 63

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGAF 178
             +++      +   +   +    + +L+NNAGI  +A       E + +M++    GAF
Sbjct: 64  DEEAI---NAGIDYAV---ETFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAF 117

Query: 179 FLTKLLLPLLKNSPVPSRIVNVTS 202
             TK  LP++K      RI+N+ S
Sbjct: 118 LTTKAALPIMKAQGG-GRIINMAS 140

Length = 258

>gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 64.7 bits (158), Expect = 6e-12
 Identities = 39/155 (25%), Positives = 69/155 (44%), Gaps = 19/155 (12%)

Query: 60  PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHL--------LSETMADITSRNKDAR 111
            V  VTGA+ G+G A A  L++ G  VV+  +++          L  T+ +     + A 
Sbjct: 4   KVAFVTGASRGIGRAIALRLAKAGATVVVAAKTASEGDNGSAKSLPGTIEETAEEIEAAG 63

Query: 112 LEAF--QVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL-TP-EGYD 167
            +A    VD+     V     +L +  +  D    + +L+NNAG +  S    TP + +D
Sbjct: 64  GQALPIVVDVRDEDQV----RALVEATV--DQFGRLDILVNNAGAIWLSLVEDTPAKRFD 117

Query: 168 QMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 202
            M   N  G + L++  LP +  +     I+N++ 
Sbjct: 118 LMQRVNLRGTYLLSQAALPHMVKAGQG-HILNISP 151

This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|181139 PRK07832, PRK07832, short chain dehydrogenase; Provisional

 Score = 64.7 bits (158), Expect = 7e-12
 Identities = 65/223 (29%), Positives = 99/223 (44%), Gaps = 38/223 (17%)

Query: 62  CIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSS 121
           C VTGA SG+G A A  L+ +G  + L  R +  L++T+AD  +       E   +D+S 
Sbjct: 3   CFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTV-PEHRALDISD 61

Query: 122 FQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFF 179
           + +V  F   +         H S+ +++N AGI A  T  RLT E + +M+  N +G   
Sbjct: 62  YDAVAAFAADIHA------AHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIH 115

Query: 180 LTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSK 239
           + +  +P +  +     +VNV+S                 G   L     P    Y  SK
Sbjct: 116 VIETFVPPMVAAGRGGHLVNVSS---------------AAGLVAL-----PWHAAYSASK 155

Query: 240 LCLLIFSYELHRNLGLDKSRH---VSVIAADPGVVKTNIMREV 279
             L   S E+ R    D +RH   VSV+   PG VKT ++  V
Sbjct: 156 FGLRGLS-EVLR---FDLARHGIGVSVVV--PGAVKTPLVNTV 192

Length = 272

>gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional

 Score = 64.7 bits (158), Expect = 7e-12
 Identities = 63/220 (28%), Positives = 96/220 (43%), Gaps = 34/220 (15%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V +VTGA  G+GAA A A +REG  V L    + L     A I      AR+ A   D++
Sbjct: 9   VALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVT 68

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGAF 178
              SV     ++       +    + +L+NNAGI   A    +T E + +  + +  GA+
Sbjct: 69  DAASV---AAAVAA---AEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAW 122

Query: 179 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYS 238
              + +LP +      S IVN+ S TH                F +   C+P    Y  +
Sbjct: 123 NGCRAVLPGMVERGRGS-IVNIAS-TH---------------AFKIIPGCFP----YPVA 161

Query: 239 KLCLLIFSYELHRNLGLD-KSRHVSVIAADPGVVKTNIMR 277
           K  LL     L R LG++  +R+V V A  PG ++T +  
Sbjct: 162 KHGLL----GLTRALGIEYAARNVRVNAIAPGYIETQLTE 197

Length = 260

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score = 64.4 bits (157), Expect = 8e-12
 Identities = 38/144 (26%), Positives = 66/144 (45%), Gaps = 13/144 (9%)

Query: 63  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 122
           ++TGA+ G+G A A      G  V++V R +  L++   ++     +  +     D+S  
Sbjct: 13  LITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVS-- 70

Query: 123 QSVLKFKDSLQQWLLD--SDMHSSIQLLINNAGILATSSRL--TPEGYDQMMSTNYIGAF 178
                  D  ++ +LD   D    + +L+NNAG     + +  T + +  +  TN   AF
Sbjct: 71  ------DDEDRRAILDWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAF 124

Query: 179 FLTKLLLPLLKNSPVPSRIVNVTS 202
            L++   PLLK     S IVN+ S
Sbjct: 125 ELSRYAHPLLKQHA-SSAIVNIGS 147

Length = 257

>gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional

 Score = 64.0 bits (156), Expect = 1e-11
 Identities = 68/261 (26%), Positives = 106/261 (40%), Gaps = 43/261 (16%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDA---RLEAFQV 117
           V IVTGA+ G+GAA A  L+ +GF V +    ++  S   AD      +A   R  A Q 
Sbjct: 7   VAIVTGASRGIGAAIARRLAADGFAVAV----NYAGSAAAADELVAEIEAAGGRAIAVQA 62

Query: 118 DLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYI 175
           D++   +V +  D+ +           I +L+NNAG+  L T +    E +D+ ++TN  
Sbjct: 63  DVADAAAVTRLFDAAETAF------GRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLR 116

Query: 176 GAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIY 235
           GAF + +     L       RI+N+++                           P    Y
Sbjct: 117 GAFVVLREAARHLGQG---GRIINLSTSVIALPL--------------------PGYGPY 153

Query: 236 EYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLG 295
             SK  +    + L   L     R ++V A  PG V T +     S   +     L  L 
Sbjct: 154 AASKAAVEGLVHVLANELR---GRGITVNAVAPGPVATELFFNGKSAEQIDQLAGLAPLE 210

Query: 296 LLQSPEKGINSVLDAALAPPE 316
            L +PE+   +V  A LA P+
Sbjct: 211 RLGTPEEIAAAV--AFLAGPD 229

Length = 245

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score = 63.6 bits (155), Expect = 1e-11
 Identities = 42/143 (29%), Positives = 64/143 (44%), Gaps = 20/143 (13%)

Query: 63  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNK-DARLEAFQVDLSS 121
           +VTGA  G+G A   AL++ G  VV V R       T AD+ S  +    +E   VDLS 
Sbjct: 11  LVTGAGKGIGRATVKALAKAGARVVAVSR-------TQADLDSLVRECPGIEPVCVDLSD 63

Query: 122 FQSVLKFKDSLQQWLLDSDMHSSIQLLINNAG--ILATSSRLTPEGYDQMMSTNYIGAFF 179
           + +  +   S             + LL+NNA   IL     +T E +D+    N      
Sbjct: 64  WDATEEALGS----------VGPVDLLVNNAAVAILQPFLEVTKEAFDRSFDVNVRAVIH 113

Query: 180 LTKLLLPLLKNSPVPSRIVNVTS 202
           +++++   +    VP  IVNV+S
Sbjct: 114 VSQIVARGMIARGVPGSIVNVSS 136

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3

 Score = 63.6 bits (155), Expect = 1e-11
 Identities = 43/145 (29%), Positives = 66/145 (45%), Gaps = 13/145 (8%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V ++TGA+SG+G A A A +  G  VVL  RS+  L E   ++  R       A   D++
Sbjct: 2   VVVITGASSGIGRATALAFAERGAKVVLAARSAEALHELAREV--RELGGEAIAVVADVA 59

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL---TPEGYDQMMSTNYIGA 177
               V +  D+  +          I   +NNAG+ A   R    TPE + ++   NY+G 
Sbjct: 60  DAAQVERAADTAVERF------GRIDTWVNNAGV-AVFGRFEDVTPEEFRRVFDVNYLGH 112

Query: 178 FFLTKLLLPLLKNSPVPSRIVNVTS 202
            + T   LP L+       ++NV S
Sbjct: 113 VYGTLAALPHLRRR-GGGALINVGS 136

These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score = 63.6 bits (155), Expect = 1e-11
 Identities = 33/156 (21%), Positives = 73/156 (46%), Gaps = 10/156 (6%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           + +VTGA  G+G+A A  L  +G+ V+    S +  ++   +     +D ++   ++D++
Sbjct: 4   IALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTED-QVRLKELDVT 62

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGAF 178
             +   +    +++          + +L+NNAGI   S   R++ + ++ +++TN    F
Sbjct: 63  DTEECAEALAEIEE------EEGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVF 116

Query: 179 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN 214
            +T+ L   +       RI+N++S         Q N
Sbjct: 117 NVTQPLFAAMCEQGY-GRIINISSVNGLKGQFGQTN 151

Length = 245

>gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs

 Score = 63.4 bits (154), Expect = 1e-11
 Identities = 38/151 (25%), Positives = 62/151 (41%), Gaps = 16/151 (10%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNK-DARLEAFQVDL 119
           + +VTGA+ G+G  AA   +R G  V+L+GR+   L +    I        +     +  
Sbjct: 6   IILVTGASDGIGREAALTYARYGATVILLGRNEEKLRQVADHINEEGGRQPQWFILDLLT 65

Query: 120 SSFQSVLKFKDSLQQWL--LDSDMHSSIQLLINNAGILATS---SRLTPEGYDQMMSTNY 174
            + ++  +    +      LD  +H        NAG+L      S   P+ +  +   N 
Sbjct: 66  CTSENCQQLAQRIAVNYPRLDGVLH--------NAGLLGDVCPLSEQNPQVWQDVXQVNV 117

Query: 175 IGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH 205
              F LT+ LLPLL  S   S +   TS + 
Sbjct: 118 NATFMLTQALLPLLLKSDAGSLV--FTSSSV 146

Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236

>gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs

 Score = 63.5 bits (155), Expect = 1e-11
 Identities = 38/144 (26%), Positives = 63/144 (43%), Gaps = 14/144 (9%)

Query: 63  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLS-ETMADITSRNKDARLEAFQVDLSS 121
           +VTG + G+G A A  L+  G  VV+  R S   + E  A+I       +    + D+S 
Sbjct: 2   LVTGGSRGIGKAIALRLAERGADVVINYRKSKDAAAEVAAEI--EELGGKAVVVRADVSQ 59

Query: 122 FQSVLK-FKDSLQQWLLDSDMHSSIQLLINNA--GILATSSRLTPEGYDQMMSTNYIGAF 178
            Q V + F    +++         + +L++NA  G     S LTP  +D  M+TN     
Sbjct: 60  PQDVEEMFAAVKERF-------GRLDVLVSNAAAGAFRPLSELTPAHWDAKMNTNLKALV 112

Query: 179 FLTKLLLPLLKNSPVPSRIVNVTS 202
              +    L++      RIV ++S
Sbjct: 113 HCAQQAAKLMRERG-GGRIVAISS 135

This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional

 Score = 63.6 bits (155), Expect = 1e-11
 Identities = 63/269 (23%), Positives = 100/269 (37%), Gaps = 48/269 (17%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVG----RSSHLLSETMADITSRNKDARLEAFQ 116
             ++TG + GLG A A  L+ +G  V+++     R         A I +    A   AF 
Sbjct: 8   RVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFD 67

Query: 117 V-DLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTN 173
           V D ++ ++ L             +    + +L+NNAGI   A  + L+ E +D ++  N
Sbjct: 68  VRDFAATRAALD---------AGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVN 118

Query: 174 YIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCAR 233
             G F +T+  LP +  +    RIVN+ S         QVN                   
Sbjct: 119 LDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRGQVN------------------- 159

Query: 234 IYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL 293
            Y  SK  L+  +  L   L     R ++V A  PG + T +              +L  
Sbjct: 160 -YAASKAGLIGLTKTLANELA---PRGITVNAVAPGAINTPMADNAA-----PTEHLLNP 210

Query: 294 --LGLLQSPEKGINSVLDAALAPPETSGV 320
             +  L  P++    V  A L     S V
Sbjct: 211 VPVQRLGEPDEVAALV--AFLVSDAASYV 237

Length = 249

>gnl|CDD|187654 cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13 ketoreductase (KR), classical (c)-like SDRs

 Score = 63.3 bits (154), Expect = 2e-11
 Identities = 56/211 (26%), Positives = 86/211 (40%), Gaps = 32/211 (15%)

Query: 64  VTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQ 123
           +TG++ GLG AAA  L  +G  VVL  RS    ++  A                DLSS  
Sbjct: 12  ITGSSDGLGLAAARTLLHQGHEVVLHARSQKRAADAKAAC-----PGAAGVLIGDLSSLA 66

Query: 124 SVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTP-EGYDQMMSTNYIGAFFLTK 182
              K  D         +       +I+NAGIL+  +R TP  G   M++ N +  + LT 
Sbjct: 67  ETRKLAD-------QVNAIGRFDAVIHNAGILSGPNRKTPDTGIPAMVAVNVLAPYVLTA 119

Query: 183 LLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCL 242
           L+         P R++ ++S  HR        N ++       ++    +  Y  SKL +
Sbjct: 120 LIRR-------PKRLIYLSSGMHRGG------NASLDD-IDWFNRGENDSPAYSDSKLHV 165

Query: 243 LIFSYELHRNLGLDKSRHVSVIAADPGVVKT 273
           L  +  + R     + + VS  A  PG V T
Sbjct: 166 LTLAAAVAR-----RWKDVSSNAVHPGWVPT 191

Daunorubicin is a clinically important therapeutic compound used in some cancer treatments. Daunorubicin C-13 ketoreductase is member of the classical SDR family with a canonical glycine-rich NAD(P)-binding motif, but lacking a complete match to the active site tetrad characteristic of this group. The critical Tyr, plus the Lys and upstream Asn are present, but the catalytic Ser is replaced, generally by Gln. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 260

>gnl|CDD|187645 cd08941, 3KS_SDR_c, 3-keto steroid reductase, classical (c) SDRs

 Score = 63.6 bits (155), Expect = 2e-11
 Identities = 69/293 (23%), Positives = 109/293 (37%), Gaps = 52/293 (17%)

Query: 59  RPVCIVTGATSGLGAAAAYAL-----SREGFHVVLVGRSSHLLSETMADITSRNKDAR-- 111
           R V +VTGA SGLG A    L           ++L  R+          + + + DAR  
Sbjct: 1   RKVVLVTGANSGLGLAICERLLAEDDENPELTLILACRNLQRAEAACRALLASHPDARVV 60

Query: 112 LEAFQVDLSSFQSVLKFKDSLQQ---------------------WL------LDSDMHS- 143
            +   VDLS+  SV      L++                     W+      L + + + 
Sbjct: 61  FDYVLVDLSNMVSVFAAAKELKKRYPRLDYLYLNAGIMPNPGIDWIGAIKEVLTNPLFAV 120

Query: 144 -SIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 202
            +    I   G+L+   + T +G  ++  TN  G ++L + L PLL  S   S+I+  +S
Sbjct: 121 TNPTYKIQAEGLLSQGDKATEDGLGEVFQTNVFGHYYLIRELEPLLCRSDGGSQIIWTSS 180

Query: 203 FTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVS 262
                  NA     ++     L+         Y  SK  + + S  L+R         V 
Sbjct: 181 ------LNASPKYFSLEDIQHLKGP-----APYSSSKYLVDLLSLALNRKF---NKLGVY 226

Query: 263 VIAADPGVVKTNIMRE-VPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP 314
                PG+  TN+    +P F   +A  +  LL  L SP   I S  + A A 
Sbjct: 227 SYVVHPGICTTNLTYGILPPFTWTLALPLFYLLRRLGSPWHTI-SPYNGAEAL 278

3-keto steroid reductase (in concert with other enzymes) catalyzes NADP-dependent sterol C-4 demethylation, as part of steroid biosynthesis. 3-keto reductase is a classical SDR, with a well conserved canonical active site tetrad and fairly well conserved characteristic NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 290

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score = 62.9 bits (153), Expect = 2e-11
 Identities = 39/146 (26%), Positives = 60/146 (41%), Gaps = 13/146 (8%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V  +TG   GLG A A  L+  G  V L+GR +  LS+T+  +        L    +DL 
Sbjct: 9   VVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVP----ADALRIGGIDLV 64

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAF 178
             Q+  +  D + +          +  L+N AG     T +    + +D+M   N     
Sbjct: 65  DPQAARRAVDEVNR------QFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTL 118

Query: 179 FLTKLLLPLLKNSPVPSRIVNVTSFT 204
             +K  LP L  S    RIVN+ +  
Sbjct: 119 NASKAALPALTASGG-GRIVNIGAGA 143

Length = 239

>gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional

 Score = 61.9 bits (151), Expect = 4e-11
 Identities = 35/134 (26%), Positives = 64/134 (47%), Gaps = 19/134 (14%)

Query: 58  KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQV 117
           +RP  ++TGA+ G+GAA A  L+     ++L GR +  L E  A++           F V
Sbjct: 2   ERPTALITGASRGIGAAIARELAP-THTLLLGGRPAERLDELAAELPG------ATPFPV 54

Query: 118 DLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYI 175
           DL+  +++           ++      + +L++NAG+  L   +  T + +   +  N +
Sbjct: 55  DLTDPEAI--------AAAVEQLGR--LDVLVHNAGVADLGPVAESTVDEWRATLEVNVV 104

Query: 176 GAFFLTKLLLPLLK 189
               LT+LLLP L+
Sbjct: 105 APAELTRLLLPALR 118

Length = 227

>gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase

 Score = 61.7 bits (150), Expect = 5e-11
 Identities = 43/146 (29%), Positives = 69/146 (47%), Gaps = 16/146 (10%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V +VTGA +GLG   A  L+  G  +V  GRS    SET   + +     R  +   DLS
Sbjct: 7   VALVTGANTGLGQGIAVGLAEAGADIVGAGRSE--PSETQQQVEALG--RRFLSLTADLS 62

Query: 121 SFQSVLKFKDSLQQWLLDS--DMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIG 176
             +++        + L+DS  +    I +L+NNAGI+  A +   + + +D +M+ N   
Sbjct: 63  DIEAI--------KALVDSAVEEFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKS 114

Query: 177 AFFLTKLLLPLLKNSPVPSRIVNVTS 202
            FFLT+             +I+N+ S
Sbjct: 115 VFFLTQAAAKHFLKQGRGGKIINIAS 140

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248

>gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs

 Score = 61.8 bits (150), Expect = 6e-11
 Identities = 40/149 (26%), Positives = 67/149 (44%), Gaps = 12/149 (8%)

Query: 58  KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQV 117
           K  V ++TG  SGLG A A  L++EG  + LV  +   L    A +     DA +   + 
Sbjct: 2   KDKVVLITGGGSGLGLATAVRLAKEGAKLSLVDLNEEGLEAAKAALLEIAPDAEVLLIKA 61

Query: 118 DLSSFQSVLKFKD-SLQQWLLDSDMHSSIQLLINNAGI---LATSSRLTPEGYDQMMSTN 173
           D+S    V  + D +++Q+         I    NNAGI      +     + +D+++S N
Sbjct: 62  DVSDEAQVEAYVDATVEQF-------GRIDGFFNNAGIEGKQNLTEDFGADEFDKVVSIN 114

Query: 174 YIGAFFLTKLLLPLLKNSPVPSRIVNVTS 202
             G F+  + +L +++       IVN  S
Sbjct: 115 LRGVFYGLEKVLKVMREQGS-GMIVNTAS 142

Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional

 Score = 61.7 bits (150), Expect = 6e-11
 Identities = 65/270 (24%), Positives = 104/270 (38%), Gaps = 71/270 (26%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAF--QVD 118
           V +VTG  +G+G A A A +REG  VV+  R +    ET+A I    ++A  EA     D
Sbjct: 9   VALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALI----REAGGEALFVACD 64

Query: 119 LSSFQSVLKFKDSLQQWLLDSDM--HSSIQLLINNAGILATSSRL---TPEGYDQMMSTN 173
           ++        +D+  + L++  +  +  +    NNAGI     RL   +   +D +M  N
Sbjct: 65  VT--------RDAEVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVN 116

Query: 174 YIGAFFLTKLLLP-LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCA 232
             G +   K  +P +L                      A VN  ++ G         P  
Sbjct: 117 VKGVWLCMKYQIPLMLAQGG-----------------GAIVNTASVAGLGAA-----PKM 154

Query: 233 RIYEYSKLCLLIFSYELHRNLGLDKS-------RHVSVIAADPGVVKTNIMR-------E 278
            IY  SK          H  +GL KS       + + V A  P V+ T++ R        
Sbjct: 155 SIYAASK----------HAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPR 204

Query: 279 VPSFLSLMAFTVLKLLGLLQSPEKGINSVL 308
              F + M       +G +   E+  ++VL
Sbjct: 205 KAEFAAAM-----HPVGRIGKVEEVASAVL 229

Length = 253

>gnl|CDD|236357 PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional

 Score = 61.4 bits (150), Expect = 7e-11
 Identities = 40/138 (28%), Positives = 63/138 (45%), Gaps = 14/138 (10%)

Query: 64  VTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRN-KDARLEAFQVDLSSF 122
           VTGA  G+G  AA   +R G  V+L+GR+   L     +I +       +    +  ++ 
Sbjct: 17  VTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATP 76

Query: 123 QSVLKFKDSLQQWL--LDSDMHSSIQLLINNAGILATSS---RLTPEGYDQMMSTNYIGA 177
           Q+  +  D++++    LD  +H        NAG+L       +  PE +  +M  N    
Sbjct: 77  QNYQQLADTIEEQFGRLDGVLH--------NAGLLGELGPMEQQDPEVWQDVMQVNVNAT 128

Query: 178 FFLTKLLLPLLKNSPVPS 195
           F LT+ LLPLL  SP  S
Sbjct: 129 FMLTQALLPLLLKSPAAS 146

Length = 247

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score = 62.9 bits (154), Expect = 8e-11
 Identities = 37/158 (23%), Positives = 67/158 (42%), Gaps = 16/158 (10%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V +VTGA  G+G A A  L+ EG  VVL            A++   +   R      D++
Sbjct: 424 VALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPD---RALGVACDVT 480

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL---TPEGYDQMMSTNYIGA 177
              +V   + + ++  L       + ++++NAGI A S  +   + E + +    N  G 
Sbjct: 481 DEAAV---QAAFEEAALA---FGGVDIVVSNAGI-AISGPIEETSDEDWRRSFDVNATGH 533

Query: 178 FFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNN 215
           F + +  + ++K   +   IV + S   +N  N   N 
Sbjct: 534 FLVAREAVRIMKAQGLGGSIVFIAS---KNAVNPGPNF 568

Length = 681

>gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional

 Score = 61.2 bits (149), Expect = 1e-10
 Identities = 43/148 (29%), Positives = 66/148 (44%), Gaps = 9/148 (6%)

Query: 57  IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQ 116
           ++  V +VTG +SG+G A    L   G  V + GR    L+   A +  +   ARL A +
Sbjct: 6   LEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAAR 65

Query: 117 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAG--ILATSSRLTPEGYDQMMSTNY 174
            D+     V  F  +++      DM      L+NNAG   ++T +  T + +   +   Y
Sbjct: 66  CDVLDEADVAAFAAAVEARFGGVDM------LVNNAGQGRVSTFADTTDDAWRDELELKY 119

Query: 175 IGAFFLTKLLLPLLKNSPVPSRIVNVTS 202
                 T+  LPLL+ S   S IV V S
Sbjct: 120 FSVINPTRAFLPLLRASAAAS-IVCVNS 146

Length = 265

>gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated

 Score = 61.4 bits (149), Expect = 1e-10
 Identities = 38/149 (25%), Positives = 67/149 (44%), Gaps = 22/149 (14%)

Query: 56  GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAF 115
           G+K  V IVTG + G+G A    L  EG +V+                        ++ F
Sbjct: 3   GLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKE-------------PSYNDVDYF 49

Query: 116 QVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS-RLTPEG-YDQMMSTN 173
           +VD+S+ + V+K  D +         +  I +L+NNAGI +  +     E  +D++++ N
Sbjct: 50  KVDVSNKEQVIKGIDYV------ISKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVN 103

Query: 174 YIGAFFLTKLLLPLLKNSPVPSRIVNVTS 202
             G F ++K  +P +        I+N+ S
Sbjct: 104 VNGIFLMSKYTIPYMLKQDKGV-IINIAS 131

Length = 258

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score = 60.9 bits (148), Expect = 1e-10
 Identities = 39/144 (27%), Positives = 74/144 (51%), Gaps = 9/144 (6%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V +VTGA+SG+G A A  L+  G +VV+  RS    +E + +   +    +  A Q D+S
Sbjct: 5   VALVTGASSGIGKAIAIRLATAGANVVVNYRSKEDAAEEVVEEI-KAVGGKAIAVQADVS 63

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGAF 178
             + V+    S  +         ++ +L+NNAG+   A+S  +T E +++++  N  G F
Sbjct: 64  KEEDVVALFQSAIKEF------GTLDILVNNAGLQGDASSHEMTLEDWNKVIDVNLTGQF 117

Query: 179 FLTKLLLPLLKNSPVPSRIVNVTS 202
              +  +   + S +  +I+N++S
Sbjct: 118 LCAREAIKRFRKSKIKGKIINMSS 141

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score = 61.1 bits (149), Expect = 1e-10
 Identities = 42/150 (28%), Positives = 69/150 (46%), Gaps = 15/150 (10%)

Query: 59  RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVD 118
             V I+TGA+ G+G A A  L+R G  +VL  R+   L+    ++     +A       D
Sbjct: 1   GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEAL--VVPTD 58

Query: 119 LSSFQSVLKFKDSLQQWLLDSDMH-SSIQLLINNAGILATS---SRLTPEGYDQMMSTNY 174
           +S  ++        ++ +  +      I +L+NNAGI   S          ++++M  NY
Sbjct: 59  VSDAEAC-------ERLIEAAVARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNY 111

Query: 175 IGAFFLTKLLLPLLKNSPVPSRIVNVTSFT 204
           +GA + T   LP LK S    +IV V+S  
Sbjct: 112 LGAVYCTHAALPHLKAS--RGQIVVVSSLA 139

Length = 263

>gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional

 Score = 61.1 bits (149), Expect = 1e-10
 Identities = 38/131 (29%), Positives = 62/131 (47%), Gaps = 11/131 (8%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V I+TGA+SG+G AAA   +REG  VV+  R    L + +A+I +   +A   A  V   
Sbjct: 8   VAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDE 67

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGA 177
           ++   L          L  +    + +  NNAG L      + ++ EG+ + ++TN   A
Sbjct: 68  AYAKALV--------ALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSA 119

Query: 178 FFLTKLLLPLL 188
           F   K  +P +
Sbjct: 120 FLGAKHQIPAM 130

Length = 254

>gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional

 Score = 60.1 bits (146), Expect = 2e-10
 Identities = 39/142 (27%), Positives = 67/142 (47%), Gaps = 19/142 (13%)

Query: 63  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 122
           +VTGA+SG+G A A AL++ G  VV   R         A +     +   E  ++D+   
Sbjct: 13  LVTGASSGIGRACAVALAQRGARVVAAAR-------NAAALDRLAGETGCEPLRLDVGD- 64

Query: 123 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGAFFL 180
                  D+  +  L +    +   L+N AGI  L ++  +T EG+D++M+ N  GA  +
Sbjct: 65  -------DAAIRAALAA--AGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALV 115

Query: 181 TKLLLPLLKNSPVPSRIVNVTS 202
            + +   +  +     IVNV+S
Sbjct: 116 ARHVARAMIAAGRGGSIVNVSS 137

Length = 245

>gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional

 Score = 60.1 bits (146), Expect = 2e-10
 Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 11/91 (12%)

Query: 63  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 122
           ++TGA+ G+GAAAA A + EG H+ LV R +  L    AD+ + +    +    +DLSS 
Sbjct: 11  LITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAH-GVDVAVHALDLSS- 68

Query: 123 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAG 153
                  ++ +Q   ++     I +L+NNAG
Sbjct: 69  ------PEAREQLAAEAG---DIDILVNNAG 90

Length = 259

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 59.3 bits (144), Expect = 4e-10
 Identities = 54/226 (23%), Positives = 82/226 (36%), Gaps = 43/226 (19%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V IVTG   GLG A A  L  EG  VVL            A++      AR   F +D++
Sbjct: 7   VAIVTGGARGLGLAHARLLVAEGAKVVLSDILDEEGQAAAAELGDA---ARF--FHLDVT 61

Query: 121 SFQSVLKFKDSLQQWLLDSDM----HSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNY 174
                         W    D        + +L+NNAGIL   T    T E + +++  N 
Sbjct: 62  ----------DEDGWTAVVDTAREAFGRLDVLVNNAGILTGGTVETTTLEEWRRLLDINL 111

Query: 175 IGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARI 234
            G F  T+ ++P +K +   S I+N++S             E + G         P    
Sbjct: 112 TGVFLGTRAVIPPMKEAGGGS-IINMSSI------------EGLVGD--------PALAA 150

Query: 235 YEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP 280
           Y  SK  +   +              + V +  PG + T +  E+ 
Sbjct: 151 YNASKGAVRGLTKSAALECATQGYG-IRVNSVHPGYIYTPMTDELL 195

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|212496 cd11730, Tthb094_like_SDR_c, Tthb094 and related proteins, classical (c) SDRs

 Score = 58.7 bits (142), Expect = 4e-10
 Identities = 31/128 (24%), Positives = 56/128 (43%), Gaps = 19/128 (14%)

Query: 63  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 122
           ++ GAT G+G A A AL+  G+ ++L GR +  L+   A++ +  + A + A     +  
Sbjct: 2   LILGATGGIGRALARALAGRGWRLLLSGRDAGALAGLAAEVGALARPADVAAELEVWALA 61

Query: 123 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFL 180
           Q +                   + LL+  AG +     +R  P  + +++  N  GA  +
Sbjct: 62  QEL-----------------GPLDLLVYAAGAILGKPLARTKPAAWRRILDANLTGAALV 104

Query: 181 TKLLLPLL 188
            K  L LL
Sbjct: 105 LKHALALL 112

Tthb094 from Thermus Thermophilus is a classical SDR which binds NADP. Members of this subgroup contain the YXXXK active site characteristic of SDRs. Also, an upstream Asn residue of the canonical catalytic tetrad is partially conserved in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 206

>gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional

 Score = 59.1 bits (143), Expect = 4e-10
 Identities = 46/152 (30%), Positives = 70/152 (46%), Gaps = 14/152 (9%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHV-VLVGRSSHLLSETMADITSRNKDARLEAFQVDL 119
           + +VTG + G+G A A  L++EG+ V V   ++ H   E +  IT     A     Q D+
Sbjct: 3   IALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAF--VLQADI 60

Query: 120 SSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIG 176
           S    V+    ++ Q          +  L+NNAGIL    T   LT E  ++++STN  G
Sbjct: 61  SDENQVVAMFTAIDQ------HDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTG 114

Query: 177 AFFLTKLLLP--LLKNSPVPSRIVNVTSFTHR 206
            F   +  +    LK+      IVNV+S   R
Sbjct: 115 YFLCCREAVKRMALKHGGSGGAIVNVSSAASR 146

Length = 247

>gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs

 Score = 59.4 bits (144), Expect = 4e-10
 Identities = 40/144 (27%), Positives = 64/144 (44%), Gaps = 9/144 (6%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V +VTG+TSG+G   A AL+  G ++VL G       E +    +     ++     DLS
Sbjct: 4   VALVTGSTSGIGLGIARALAAAGANIVLNGFGDAAEIEAVRAGLAAKHGVKVLYHGADLS 63

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGAF 178
              ++       Q           + +L+NNAGI  +A       E +D +++ N    F
Sbjct: 64  KPAAIEDMVAYAQ------RQFGGVDILVNNAGIQHVAPIEDFPTEKWDAIIALNLSAVF 117

Query: 179 FLTKLLLPLLKNSPVPSRIVNVTS 202
             T+L LP +K      RI+N+ S
Sbjct: 118 HTTRLALPHMKKQGW-GRIINIAS 140

DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

 Score = 60.6 bits (147), Expect = 4e-10
 Identities = 41/157 (26%), Positives = 68/157 (43%), Gaps = 10/157 (6%)

Query: 49  RCVPPITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNK 108
           R +P    + R V  VTG   G+G   A  L+ EG HVVL   +        A+I  +  
Sbjct: 404 RRMPKEKTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFG 463

Query: 109 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL---TPEG 165
             R  A ++D++  Q+V   K +     L    +  + +++NNAGI ATSS     T + 
Sbjct: 464 AGRAVALKMDVTDEQAV---KAAFADVALA---YGGVDIVVNNAGI-ATSSPFEETTLQE 516

Query: 166 YDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 202
           +   +     G F + +     ++   +   IV + S
Sbjct: 517 WQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIAS 553

Length = 676

>gnl|CDD|181113 PRK07775, PRK07775, short chain dehydrogenase; Provisional

 Score = 59.4 bits (144), Expect = 4e-10
 Identities = 36/131 (27%), Positives = 61/131 (46%), Gaps = 11/131 (8%)

Query: 58  KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQV 117
           +RP  +V GA+SG+GAA A  L+  GF V L  R      E +  I +   +A   AF +
Sbjct: 10  RRPA-LVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAV--AFPL 66

Query: 118 DLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYI 175
           D++   SV  F    ++          I++L++ AG         ++ E ++  +  + +
Sbjct: 67  DVTDPDSVKSFVAQAEE------ALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLV 120

Query: 176 GAFFLTKLLLP 186
           GA  L   +LP
Sbjct: 121 GANRLATAVLP 131

Length = 274

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score = 58.7 bits (142), Expect = 5e-10
 Identities = 42/152 (27%), Positives = 65/152 (42%), Gaps = 20/152 (13%)

Query: 63  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQV--DLS 120
           +VTGA+ G+G A A  L  EG+ V +  R    L+   A               +  D+ 
Sbjct: 4   LVTGASRGIGEATARLLHAEGYRVGICARDEARLAAAAAQELEG-------VLGLAGDVR 56

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGAF 178
               V +  D++++          +  L+NNAG+  +     LTPE +  ++ TN  GAF
Sbjct: 57  DEADVRRAVDAMEEAF------GGLDALVNNAGVGVMKPVEELTPEEWRLVLDTNLTGAF 110

Query: 179 FLT-KLLLPLLKNSPVPSRIVNVTSFTHRNVF 209
           +   K    LL+       IVNV S   +N F
Sbjct: 111 YCIHKAAPALLRRG--GGTIVNVGSLAGKNAF 140

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score = 58.8 bits (143), Expect = 5e-10
 Identities = 39/142 (27%), Positives = 67/142 (47%), Gaps = 11/142 (7%)

Query: 63  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 122
           +VTGA  G+G A A AL+  G  V  V R+   L E +AD+           +++D++  
Sbjct: 2   LVTGAAQGIGYAVARALAEAGARVAAVDRNFEQLLELVADLRR--YGYPFATYKLDVADS 59

Query: 123 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGAFFL 180
            +V    + +Q+       +  I +L+N AGIL   +   L+ E +    + N  G F +
Sbjct: 60  AAV---DEVVQRLE---REYGPIDVLVNVAGILRLGAIDSLSDEDWQATFAVNTFGVFNV 113

Query: 181 TKLLLPLLKNSPVPSRIVNVTS 202
           ++ + P +K     + IV V S
Sbjct: 114 SQAVSPRMKRRRSGA-IVTVGS 134

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|187631 cd05373, SDR_c10, classical (c) SDR, subgroup 10

 Score = 58.5 bits (142), Expect = 7e-10
 Identities = 34/134 (25%), Positives = 51/134 (38%), Gaps = 17/134 (12%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V  V GA  GLGAA A   + EGF V L  R    L   + DI      +   A   D  
Sbjct: 1   VAAVVGAGDGLGAAIARRFAAEGFSVALAARREAKLEALLVDIIRDAGGSAK-AVPTDAR 59

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAG------ILATSSRLTPEGYDQMMSTNY 174
               V+   D ++      +    +++L+ NAG      IL T    TP  ++++     
Sbjct: 60  DEDEVIALFDLIE------EEIGPLEVLVYNAGANVWFPILET----TPRVFEKVWEMAA 109

Query: 175 IGAFFLTKLLLPLL 188
            G F   +     +
Sbjct: 110 FGGFLAAREAAKRM 123

This subgroup resembles the classical SDRs, but has an incomplete match to the canonical glycine rich NAD-binding motif and lacks the typical active site tetrad (instead of the critical active site Tyr, it has Phe, but contains the nearby Lys). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 238

>gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs

 Score = 58.1 bits (141), Expect = 9e-10
 Identities = 35/147 (23%), Positives = 56/147 (38%), Gaps = 16/147 (10%)

Query: 60  PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMAD--ITSRNKDARLEAFQV 117
            V +VTGA   +G A A AL+ EG+ VV+    S   ++ + D     RN        Q 
Sbjct: 1   AVALVTGAAKRIGRAIAEALAAEGYRVVVHYNRSEAEAQRLKDELNALRNSAV---LVQA 57

Query: 118 DLSSFQSVLKF-KDSLQQWLLDSDMHSSIQLLINNAGI-LATSSRLTPEG-YDQMMSTNY 174
           DLS F +       + + +           +L+NNA     T      E  + ++   N 
Sbjct: 58  DLSDFAACADLVAAAFRAF-------GRCDVLVNNASAFYPTPLGQGSEDAWAELFGINL 110

Query: 175 IGAFFLTKLLLPLLKNSPVPSRIVNVT 201
              + L +     L  S     I+N+ 
Sbjct: 111 KAPYLLIQAFARRLAGS-RNGSIINII 136

Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234

>gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6

 Score = 58.1 bits (141), Expect = 9e-10
 Identities = 31/129 (24%), Positives = 61/129 (47%), Gaps = 10/129 (7%)

Query: 63  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 122
           ++TGA+SG+G A A   ++ G++V L  R +  L E  A++ + N    +E   +D++  
Sbjct: 2   LITGASSGIGRALAREFAKAGYNVALAARRTDRLDELKAELLNPNPSVEVEI--LDVTDE 59

Query: 123 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGAFFL 180
           +                     + L+I NAG+   +S   L+ + + + + TN +GA  +
Sbjct: 60  ERNQL------VIAELEAELGGLDLVIINAGVGKGTSLGDLSFKAFRETIDTNLLGAAAI 113

Query: 181 TKLLLPLLK 189
            +  LP  +
Sbjct: 114 LEAALPQFR 122

These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 57.9 bits (140), Expect = 1e-09
 Identities = 42/148 (28%), Positives = 71/148 (47%), Gaps = 16/148 (10%)

Query: 57  IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQ 116
            K  V ++TG T G+G A A A  REG  V ++  S+   ++ +       ++  +   +
Sbjct: 5   FKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKEL-------REKGVFTIK 57

Query: 117 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNY 174
            D+ +   V K K+ +++          + +L+NNAGI+          E Y++M+  N 
Sbjct: 58  CDVGNRDQVKKSKEVVEKEF------GRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINL 111

Query: 175 IGAFFLTKLLLPLLKNSPVPSRIVNVTS 202
            GA + T   LPLLK S   + IVN+ S
Sbjct: 112 NGAIYTTYEFLPLLKLSKNGA-IVNIAS 138

Length = 255

>gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional

 Score = 57.4 bits (139), Expect = 2e-09
 Identities = 61/225 (27%), Positives = 87/225 (38%), Gaps = 42/225 (18%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V IVTGA  G+G A A AL+REG  VV+   ++         I +    A   A QVD+S
Sbjct: 8   VAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAI--AVQVDVS 65

Query: 121 SFQSVLKFKD-SLQQWLLDSDMHSSIQLLINNAGI-----LATSSRLTPEGYDQMMSTNY 174
              S     D ++  +         I  L+NNA I     L     +  + Y + MS N 
Sbjct: 66  DPDSAKAMADATVSAF-------GGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNL 118

Query: 175 IGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARI 234
            GA   T+ +   +        IVN +S                T  +         +  
Sbjct: 119 DGALVCTRAVYKHMAKRG-GGAIVNQSS----------------TAAW-------LYSNF 154

Query: 235 YEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV 279
           Y  +K+ L   + +L R LG    R V+ IA  PG + T   R V
Sbjct: 155 YGLAKVGLNGLTQQLARELGGMNIR-VNAIA--PGPIDTEATRTV 196

Length = 250

>gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs

 Score = 57.4 bits (139), Expect = 2e-09
 Identities = 42/158 (26%), Positives = 73/158 (46%), Gaps = 16/158 (10%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V +VTG  SG+G A A  L+ EG  VV+      +  E +A+       A     Q D++
Sbjct: 3   VALVTGGASGIGLAIAKRLAAEGAAVVVADIDPEIA-EKVAEAAQGGPRAL--GVQCDVT 59

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSR---LTPEGYDQMMSTNYIGA 177
           S   V   + + +Q +L+      + ++++NAGI ATSS     + E +++ M  N  G 
Sbjct: 60  SEAQV---QSAFEQAVLE---FGGLDIVVSNAGI-ATSSPIAETSLEDWNRSMDINLTGH 112

Query: 178 FFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNN 215
           F +++    ++K+  +   IV   S   +N      N 
Sbjct: 113 FLVSREAFRIMKSQGIGGNIVFNAS---KNAVAPGPNA 147

This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional

 Score = 57.0 bits (138), Expect = 2e-09
 Identities = 40/146 (27%), Positives = 69/146 (47%), Gaps = 9/146 (6%)

Query: 59  RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVD 118
             V IVT + SG+G A A  L+++GF + +   S    ++  A+   R+   R E  Q+D
Sbjct: 2   AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEV-RSHGVRAEIRQLD 60

Query: 119 LSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIG 176
           LS      +  D L Q L        I +L+NNAG +  A    +  + + ++ + +  G
Sbjct: 61  LSDLPEGAQALDKLIQRL------GRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDG 114

Query: 177 AFFLTKLLLPLLKNSPVPSRIVNVTS 202
           AF  +++    +       RI+N+TS
Sbjct: 115 AFLCSQIAARHMVKQGQGGRIINITS 140

Length = 256

>gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional

 Score = 56.9 bits (138), Expect = 2e-09
 Identities = 42/148 (28%), Positives = 69/148 (46%), Gaps = 18/148 (12%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
             +VTG + GLG   A AL   G  VVL  R +  L E  A + +   DA       D++
Sbjct: 14  TALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDAL--WIAADVA 71

Query: 121 SFQSVLKFKD-SLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGA 177
               + +  + +L+++         + +L+NNAG    A +     E +D++M+ N  G 
Sbjct: 72  DEADIERLAEETLERF-------GHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGL 124

Query: 178 FFLTKLLLPLLKNSPVP---SRIVNVTS 202
           F L++    + K S +P    RI+NV S
Sbjct: 125 FLLSQ---AVAKRSMIPRGYGRIINVAS 149

Length = 259

>gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional

 Score = 56.8 bits (138), Expect = 3e-09
 Identities = 34/160 (21%), Positives = 66/160 (41%), Gaps = 28/160 (17%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V ++TG    LG A A  L+R G  V ++ R+       +A+I +   +A   A + D+ 
Sbjct: 12  VAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEAL--AVKADVL 69

Query: 121 SFQSVLKFKDS-LQQWLLDSDMHSSIQLLINNAG-------------ILATSSR----LT 162
             +S+ + +   L+ +           +LIN AG              L   ++    L 
Sbjct: 70  DKESLEQARQQILEDF-------GPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLD 122

Query: 163 PEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 202
            EG++ +   N +G    T++    +      + I+N++S
Sbjct: 123 EEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGN-IINISS 161

Length = 278

>gnl|CDD|233441 TIGR01500, sepiapter_red, sepiapterin reductase

 Score = 56.5 bits (136), Expect = 3e-09
 Identities = 42/152 (27%), Positives = 69/152 (45%), Gaps = 12/152 (7%)

Query: 61  VCIVTGATSGLGAAAAYALSR----EGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQ 116
           VC+VTGA+ G G   A  L++     G  +VL  R+   L +  A+I +     R+    
Sbjct: 2   VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVS 61

Query: 117 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYD-----QMMS 171
           +DL +   + +   +L++ L        + LLINNAG L   S+   +  D        +
Sbjct: 62  LDLGAEAGLEQLLKALRE-LPRPKGLQRL-LLINNAGTLGDVSKGFVDLSDSTQVQNYWA 119

Query: 172 TNYIGAFFLTKLLLPLLKNSP-VPSRIVNVTS 202
            N      LT  +L   K+SP +   +VN++S
Sbjct: 120 LNLTSMLCLTSSVLKAFKDSPGLNRTVVNISS 151

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. Length = 256

>gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1

 Score = 56.5 bits (137), Expect = 3e-09
 Identities = 41/150 (27%), Positives = 63/150 (42%), Gaps = 18/150 (12%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH--LLSETMADITSRNKDARLEAFQVD 118
             ++TG  SG+G A A A +REG  V +           ET   I    +   L    + 
Sbjct: 28  KALITGGDSGIGRAVAIAFAREGADVAINYLPEEEDDAEETKKLIEEEGRKCLLIPGDLG 87

Query: 119 LSSF-QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL---TPEGYDQMMSTNY 174
             SF + ++K    ++++         + +L+NNA        +   T E  ++   TN 
Sbjct: 88  DESFCRDLVKE--VVKEF-------GKLDILVNNAAYQHPQESIEDITTEQLEKTFRTNI 138

Query: 175 IGAFFLTKLLLPLLKNSPVPSRIVNVTSFT 204
              F+LTK  LP LK     S I+N TS T
Sbjct: 139 FSMFYLTKAALPHLKKG---SSIINTTSVT 165

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270

>gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs

 Score = 56.3 bits (136), Expect = 4e-09
 Identities = 37/147 (25%), Positives = 67/147 (45%), Gaps = 14/147 (9%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           + +VTG + G+G   A      G  V++  R +   ++   +++         A   DLS
Sbjct: 8   IVLVTGGSRGIGRMIAQGFLEAGARVIISARKAEACADAAEELS---AYGECIAIPADLS 64

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAF 178
           S + +      +      ++    + +L+NNAG    A        G+D++M  N    F
Sbjct: 65  SEEGIEALVARV------AERSDRLDVLVNNAGATWGAPLEAFPESGWDKVMDINVKSVF 118

Query: 179 FLTKLLLPLLKNSPV---PSRIVNVTS 202
           FLT+ LLPLL+ +     P+R++N+ S
Sbjct: 119 FLTQALLPLLRAAATAENPARVINIGS 145

Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated

 Score = 56.5 bits (137), Expect = 4e-09
 Identities = 40/148 (27%), Positives = 67/148 (45%), Gaps = 19/148 (12%)

Query: 58  KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQV 117
           ++ V +VTGA+SG+G A A  L+ +G+ V    R      + M D+        +    +
Sbjct: 2   QKKVALVTGASSGIGKATARRLAAQGYTVYGAARR----VDKMEDL----ASLGVHPLSL 53

Query: 118 DLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI-LATSSRLTP--EGYDQMMSTNY 174
           D++   S+    D++            I +L+NNAG     +    P  E   Q    N 
Sbjct: 54  DVTDEASIKAAVDTII------AEEGRIDVLVNNAGYGSYGAIEDVPIDEARRQ-FEVNL 106

Query: 175 IGAFFLTKLLLPLLKNSPVPSRIVNVTS 202
            GA  LT+L+LP ++      RI+N++S
Sbjct: 107 FGAARLTQLVLPHMRAQR-SGRIINISS 133

Length = 273

>gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional

 Score = 55.8 bits (134), Expect = 6e-09
 Identities = 56/231 (24%), Positives = 101/231 (43%), Gaps = 37/231 (16%)

Query: 54  ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMA-DITSRNKDARL 112
           +  +   V IVTG   G+G A   AL++EG  VV+   SS   +E +  ++     D   
Sbjct: 1   MVQLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVY- 59

Query: 113 EAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMM 170
            A Q D+S  +   +  +         +    + +L+NNAGI    T  +L  E +++++
Sbjct: 60  -AVQADVSKVEDANRLVEEAV------NHFGKVDILVNNAGITRDRTFKKLNREDWERVI 112

Query: 171 STNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYP 230
             N    F  T  +LP +  +    RI++++S   +     Q N                
Sbjct: 113 DVNLSSVFNTTSAVLPYITEAE-EGRIISISSIIGQAGGFGQTN---------------- 155

Query: 231 CARIYEYSKLCLLIFSYELHRNLGLDKSR-HVSVIAADPGVVKTNIMREVP 280
               Y  +K  +L F+    ++L L+ ++ +V+V A  PG + T ++ EVP
Sbjct: 156 ----YSAAKAGMLGFT----KSLALELAKTNVTVNAICPGFIDTEMVAEVP 198

Length = 247

>gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional

 Score = 55.7 bits (135), Expect = 7e-09
 Identities = 44/154 (28%), Positives = 63/154 (40%), Gaps = 20/154 (12%)

Query: 56  GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAF 115
            +K  V IVTG  SG+GAA +  L+ EG   V+ GRS+    E   ++ +    A     
Sbjct: 4   NLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSA-PDDEFAEELRALQPRAEF--V 60

Query: 116 QVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI-----LATSSRLTPEGYDQMM 170
           QVDL+         +              I  L+NNAG+     L        E +   +
Sbjct: 61  QVDLTDDAQCRDAVEQTVA------KFGRIDGLVNNAGVNDGVGLEAGR----EAFVASL 110

Query: 171 STNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT 204
             N I  + +    LP LK S     IVN++S T
Sbjct: 111 ERNLIHYYVMAHYCLPHLKAS--RGAIVNISSKT 142

Length = 258

>gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional

 Score = 55.3 bits (134), Expect = 7e-09
 Identities = 37/144 (25%), Positives = 57/144 (39%), Gaps = 20/144 (13%)

Query: 63  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 122
           ++TG TSG+G   A     EG  V + GR    L    A++            + D    
Sbjct: 10  LITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL-----GESALVIRADAGDV 64

Query: 123 QSVLKFKDSLQQWLLDSDMHSSIQL--LINNAGI--LATSSRLTPEGYDQMMSTNYIGAF 178
            +      +L +        +  +L  +  NAG+   A         +D+  +TN  G +
Sbjct: 65  AAQKALAQALAE--------AFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPY 116

Query: 179 FLTKLLLPLLKNSPVPSRIVNVTS 202
           FL + LLPLL N   P+ IV   S
Sbjct: 117 FLIQALLPLLAN---PASIVLNGS 137

Length = 249

>gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR

 Score = 55.5 bits (134), Expect = 8e-09
 Identities = 38/164 (23%), Positives = 68/164 (41%), Gaps = 25/164 (15%)

Query: 57  IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQ 116
           +K  V ++TG T  LG A A AL++ G  V  +GR+     +   +IT      R  A  
Sbjct: 3   LKNKVAVITGGTGVLGGAMARALAQAGAKVAALGRNQEKGDKVAKEIT--ALGGRAIALA 60

Query: 117 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL---ATSSR------------- 160
            D+    S+ + ++ +           ++ +LIN AG     AT+               
Sbjct: 61  ADVLDRASLERAREEIVAQF------GTVDILINGAGGNHPDATTDPEHYEPETEQNFFD 114

Query: 161 LTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT 204
           L  EG++ +   N  G+F  +++    +      S I+N++S  
Sbjct: 115 LDEEGWEFVFDLNLNGSFLPSQVFGKDMLEQKGGS-IINISSMN 157

D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271

>gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 55.1 bits (133), Expect = 9e-09
 Identities = 32/123 (26%), Positives = 55/123 (44%), Gaps = 11/123 (8%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V IVTG  +GLG   A AL++ G  +++    ++   ET   I    +  ++   QVDL+
Sbjct: 17  VAIVTGGNTGLGQGYAVALAKAGADIIITTHGTN-WDETRRLIEKEGR--KVTFVQVDLT 73

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL--TPEGYDQMMSTNYIGAF 178
             +S  K            +    I +L+NNAG +  +  L    E ++ +M  N    +
Sbjct: 74  KPESAEKVVKEAL------EEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVY 127

Query: 179 FLT 181
            L+
Sbjct: 128 HLS 130

Length = 258

>gnl|CDD|166421 PLN02780, PLN02780, ketoreductase/ oxidoreductase

 Score = 55.6 bits (134), Expect = 1e-08
 Identities = 50/201 (24%), Positives = 93/201 (46%), Gaps = 19/201 (9%)

Query: 11  VCSVEFWRMALLWPVSLLTSHFQLLFQNLFPRKSNPYKRCVPPITGIKR--PVCIVTGAT 68
           +C V+  +   LW + L       + +  F   +  Y   + P   +K+     +VTG T
Sbjct: 3   LCFVDKLKSQPLWLLVLFVLGSLSILKFFFTILNWVYVYFLRPAKNLKKYGSWALVTGPT 62

Query: 69  SGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSS--FQSVL 126
            G+G   A+ L+R+G ++VLV R+   L +    I S+    +++   VD S    + V 
Sbjct: 63  DGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVK 122

Query: 127 KFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMS----TNYIGAFFLTK 182
           + K++++   LD      + +LINN G+    +R   E  ++++      N  G   +T+
Sbjct: 123 RIKETIEG--LD------VGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQ 174

Query: 183 LLLP-LLKNSPVPSRIVNVTS 202
            +LP +LK       I+N+ S
Sbjct: 175 AVLPGMLKRK--KGAIINIGS 193

Length = 320

>gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 54.6 bits (132), Expect = 1e-08
 Identities = 39/145 (26%), Positives = 57/145 (39%), Gaps = 31/145 (21%)

Query: 63  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 122
           ++TGA SG+G A A A   +G  V  V +          D    + +      Q+DLS  
Sbjct: 9   LITGAASGIGLAQARAFLAQGAQVYGVDKQ---------DKPDLSGN--FHFLQLDLSDD 57

Query: 123 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFF 179
              L             D   S+ +L N AGIL         + E +  +  TN    F 
Sbjct: 58  LEPLF------------DWVPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFL 105

Query: 180 LTKLLLP--LLKNSPVPSRIVNVTS 202
           LT+  LP  L + S +   I+N+ S
Sbjct: 106 LTRAYLPQMLERKSGI---IINMCS 127

Length = 235

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score = 54.3 bits (131), Expect = 2e-08
 Identities = 50/222 (22%), Positives = 84/222 (37%), Gaps = 34/222 (15%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVG-RSSHLLSETMADITSRNKDARLEAFQVDL 119
           V I+TGA  G+G A A  L+ +GF++VL           T+ +I+         A   D+
Sbjct: 4   VAIITGAAQGIGRAIAERLAADGFNIVLADLNLEEAAKSTIQEISE--AGYNAVAVGADV 61

Query: 120 SSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL--TPEGYDQMMSTNYIGA 177
           +    V    D   +         S  +++NNAGI   +  L  T E   ++ + N  G 
Sbjct: 62  TDKDDVEALIDQAVE------KFGSFDVMVNNAGIAPITPLLTITEEDLKKVYAVNVFGV 115

Query: 178 FFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEY 237
            F  +      K      +I+N +S               I G      + +P    Y  
Sbjct: 116 LFGIQAAARQFKKLGHGGKIINASS---------------IAGV-----QGFPNLGAYSA 155

Query: 238 SKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV 279
           SK  +   +    + L     + ++V A  PG+VKT +   +
Sbjct: 156 SKFAVRGLTQTAAQELA---PKGITVNAYAPGIVKTEMWDYI 194

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score = 53.7 bits (130), Expect = 3e-08
 Identities = 41/146 (28%), Positives = 61/146 (41%), Gaps = 28/146 (19%)

Query: 63  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 122
            VTGA  G+G A A A    G  V+   ++               +D     F +D+S  
Sbjct: 12  WVTGAAQGIGYAVALAFVEAGAKVIGFDQAFL-----------TQEDYPFATFVLDVSDA 60

Query: 123 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFF 179
            +V       Q+ L +      + +L+N AGIL   AT S L+ E + Q  + N  GAF 
Sbjct: 61  AAV---AQVCQRLLAE---TGPLDVLVNAAGILRMGATDS-LSDEDWQQTFAVNAGGAFN 113

Query: 180 LTKLLLPLLKNSPVPSR---IVNVTS 202
           L + ++P  +      R   IV V S
Sbjct: 114 LFRAVMPQFR----RQRSGAIVTVGS 135

Length = 252

>gnl|CDD|181198 PRK08017, PRK08017, oxidoreductase; Provisional

 Score = 53.9 bits (130), Expect = 3e-08
 Identities = 45/145 (31%), Positives = 65/145 (44%), Gaps = 22/145 (15%)

Query: 63  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 122
           ++TG +SG+G  AA  L R G+ V+   R          D  +R          +DL   
Sbjct: 6   LITGCSSGIGLEAALELKRRGYRVLAACRK--------PDDVARMNSLGFTGILLDLDDP 57

Query: 123 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI-----LATSSRLTPEGYDQMMSTNYIGA 177
           +SV +  D +   L D+ ++     L NNAG      L+T SR   +  +Q  STN+ G 
Sbjct: 58  ESVERAADEVIA-LTDNRLYG----LFNNAGFGVYGPLSTISR---QQMEQQFSTNFFGT 109

Query: 178 FFLTKLLLPLLKNSPVPSRIVNVTS 202
             LT LLLP +       RIV  +S
Sbjct: 110 HQLTMLLLPAMLPHG-EGRIVMTSS 133

Length = 256

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score = 54.0 bits (130), Expect = 3e-08
 Identities = 67/288 (23%), Positives = 109/288 (37%), Gaps = 62/288 (21%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
             ++TGA  G+G   A   +R G +++L+  S  +  +   ++  R    R  A   D+ 
Sbjct: 8   TALITGALQGIGEGIARVFARHGANLILLDISPEIE-KLADELCGR--GHRCTAVVADVR 64

Query: 121 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGA 177
              SV    K +        +    I +L+NNAG+  L +   ++ E  D  +  N  G 
Sbjct: 65  DPASVAAAIKRA-------KEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGV 117

Query: 178 FFLTKLLLP-LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYE 236
           + +TK +LP ++       RIV ++S T   V +     ET                 Y 
Sbjct: 118 WNVTKAVLPEMIARK--DGRIVMMSSVTGDMVADP---GET----------------AYA 156

Query: 237 YSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKT----NIMREV-----PSFLSLMA 287
            +K  ++  +  L           + V A  PG V+T    +I R+       S L+ MA
Sbjct: 157 LTKAAIVGLTKSLAVEYA---QSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMA 213

Query: 288 -----------FTVLKLLGLLQSPEK----GINSVLDAALAPPETSGV 320
                        V +L   L S E     G  +V+D     PET  V
Sbjct: 214 KAIPLRRLADPLEVGELAAFLASDESSYLTGTQNVIDGGSTLPETVSV 261

Length = 263

>gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional

 Score = 53.5 bits (129), Expect = 3e-08
 Identities = 39/143 (27%), Positives = 64/143 (44%), Gaps = 15/143 (10%)

Query: 64  VTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQ-VDLSSF 122
           +TGA SGLG A A   +REG+ + L   +     ET+  +     D     +Q  D+  +
Sbjct: 5   ITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDG---FYQRCDVRDY 61

Query: 123 QSVLKFKDSL-QQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGAFF 179
             +     +  ++W         I +++NNAG+ +      L+ E +D  ++ N +G   
Sbjct: 62  SQLTALAQACEEKW-------GGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVK 114

Query: 180 LTKLLLPLLKNSPVPSRIVNVTS 202
             K  LPL K      RIVN+ S
Sbjct: 115 GCKAFLPLFKRQKS-GRIVNIAS 136

Length = 270

>gnl|CDD|187611 cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs

 Score = 53.1 bits (128), Expect = 4e-08
 Identities = 42/148 (28%), Positives = 72/148 (48%), Gaps = 13/148 (8%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVL----VGRSSHLLSETMADITSRNKDARLEAFQ 116
           V +VTGA  GLG A A A +  G  VV+      R     S + AD      D    A  
Sbjct: 7   VVLVTGAGGGLGRAYALAFAERGAKVVVNDLGGDRKGSGKSSSAADKVV---DEIKAAGG 63

Query: 117 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNY 174
             ++++ SV +  + + +  +D+     + +L+NNAGIL   S  +++ E +D +M  + 
Sbjct: 64  KAVANYDSV-EDGEKIVKTAIDA--FGRVDILVNNAGILRDRSFAKMSEEDWDLVMRVHL 120

Query: 175 IGAFFLTKLLLPLLKNSPVPSRIVNVTS 202
            G+F +T+   P ++      RI+N +S
Sbjct: 121 KGSFKVTRAAWPYMRKQKF-GRIINTSS 147

Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 250

>gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated

 Score = 53.2 bits (128), Expect = 4e-08
 Identities = 52/225 (23%), Positives = 92/225 (40%), Gaps = 41/225 (18%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V +VTGA  G+G A A  L  +GF V +V  +          ++     A   A + D+S
Sbjct: 4   VALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAI--AVKADVS 61

Query: 121 S----FQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATS--SRLTPEGYDQMMSTNY 174
                F +V +  D+        D++    +++NNAG+  T+    +T E +D++ + N 
Sbjct: 62  DRDQVFAAVRQVVDTF------GDLN----VVVNNAGVAPTTPIETITEEQFDKVYNINV 111

Query: 175 IGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARI 234
            G  +  +      K      +I+N TS          V N  +               +
Sbjct: 112 GGVIWGIQAAQEAFKKLGHGGKIINATSQA------GVVGNPELA--------------V 151

Query: 235 YEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV 279
           Y  +K  +   +    R+L    S  ++V A  PG+VKT +M ++
Sbjct: 152 YSSTKFAVRGLTQTAARDLA---SEGITVNAYAPGIVKTPMMFDI 193

Length = 256

>gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional

 Score = 53.0 bits (128), Expect = 5e-08
 Identities = 36/144 (25%), Positives = 62/144 (43%), Gaps = 18/144 (12%)

Query: 64  VTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQ 123
           +TGA SG+G A A   + EG+ V     +   L+   A++ + N         +D++   
Sbjct: 6   ITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGN----AWTGALDVTD-- 59

Query: 124 SVLKFKDSLQQWLLDSDMHSS--IQLLINNAGILATSSRL---TPEGYDQMMSTNYIGAF 178
                + +    L D    +   + +L NNAGIL           E +D+++  N  G  
Sbjct: 60  -----RAAWDAALADFAAATGGRLDVLFNNAGIL-RGGPFEDIPLEAHDRVIDINVKGVL 113

Query: 179 FLTKLLLPLLKNSPVPSRIVNVTS 202
                 LP LK +P  +R++N +S
Sbjct: 114 NGAHAALPYLKATP-GARVINTSS 136

Length = 260

>gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs

 Score = 53.1 bits (128), Expect = 5e-08
 Identities = 36/160 (22%), Positives = 62/160 (38%), Gaps = 35/160 (21%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRS-SHLLSETMADITSRNKDARLEAFQVDL 119
           V +VTG  SGLG A    L  +G  VV++    S   +                   VD+
Sbjct: 4   VAVVTGGASGLGLATVERLLAQGAKVVILDLPNSPGETVAKLGD-------NCRFVPVDV 56

Query: 120 SSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL---------TPEGYDQMM 170
           +S + V       +           + +++N AGI A +++          + E + +++
Sbjct: 57  TSEKDVKAALALAK------AKFGRLDIVVNCAGI-AVAAKTYNKKGQQPHSLELFQRVI 109

Query: 171 STNYIGAFFLTKLLLPLL-KNSP-------VPSRIVNVTS 202
           + N IG F + +L    + KN P       V   I+N  S
Sbjct: 110 NVNLIGTFNVIRLAAGAMGKNEPDQGGERGV---IINTAS 146

HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252

>gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 52.7 bits (127), Expect = 6e-08
 Identities = 31/134 (23%), Positives = 59/134 (44%), Gaps = 21/134 (15%)

Query: 57  IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQ 116
           +K  V ++TG   GLG A A  L+++G  + L+  +   L E +A+  +   + R   + 
Sbjct: 3   LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVR--GYA 60

Query: 117 VDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGIL-----------ATSSRLTPE 164
            +++  + V   F    + +         +  LINNAGIL             +S+++ E
Sbjct: 61  ANVTDEEDVEATFAQIAEDF-------GQLNGLINNAGILRDGLLVKAKDGKVTSKMSLE 113

Query: 165 GYDQMMSTNYIGAF 178
            +  ++  N  G F
Sbjct: 114 QFQSVIDVNLTGVF 127

Length = 253

>gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7

 Score = 52.4 bits (126), Expect = 7e-08
 Identities = 35/149 (23%), Positives = 61/149 (40%), Gaps = 18/149 (12%)

Query: 57  IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQ 116
           IK    +VTGA  G+G A   +L   G   V           + A + ++  D ++   +
Sbjct: 1   IKDKTVLVTGANRGIGKAFVESLLAHGAKKVYAAVRD---PGSAAHLVAKYGD-KVVPLR 56

Query: 117 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYD---QMMSTN 173
           +D++  +S+                   + ++INNAG+L  ++ L     +   Q M  N
Sbjct: 57  LDVTDPESIKAAAAQA----------KDVDVVINNAGVLKPATLLEEGALEALKQEMDVN 106

Query: 174 YIGAFFLTKLLLPLLKNSPVPSRIVNVTS 202
             G   L +   P+LK +     IVN+ S
Sbjct: 107 VFGLLRLAQAFAPVLKANG-GGAIVNLNS 134

These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235

>gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR

 Score = 52.5 bits (126), Expect = 7e-08
 Identities = 40/148 (27%), Positives = 65/148 (43%), Gaps = 13/148 (8%)

Query: 59  RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVD 118
             V +VTGATSG+G A A  L +EG  V +  R    L+ T+ ++  R      +    D
Sbjct: 3   SEVALVTGATSGIGLAIARRLGKEGLRVFVCARGEEGLATTVKEL--REAGVEADGRTCD 60

Query: 119 LSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIG 176
           + S   +     +          +  I +L+NNAG      ++ L  E +  ++ TN  G
Sbjct: 61  VRSVPEIEALVAAAV------ARYGPIDVLVNNAGRSGGGATAELADELWLDVVETNLTG 114

Query: 177 AFFLTKLLLPL--LKNSPVPSRIVNVTS 202
            F +TK +L    +       RI+N+ S
Sbjct: 115 VFRVTKEVLKAGGMLERGT-GRIINIAS 141

Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258

>gnl|CDD|183489 PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional

 Score = 52.7 bits (127), Expect = 7e-08
 Identities = 31/128 (24%), Positives = 55/128 (42%), Gaps = 10/128 (7%)

Query: 58  KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQV 117
              V +V G    LGA   + L+ EG+ V +   +S   +    +I +   +     F  
Sbjct: 1   MNQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGA 60

Query: 118 DLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTP---EGYDQMMSTNY 174
           D +S QSVL     +       ++   + LL+ NAGI A ++ +T      +D+ +  N 
Sbjct: 61  DATSEQSVLALSRGVD------EIFGRVDLLVYNAGI-AKAAFITDFQLGDFDRSLQVNL 113

Query: 175 IGAFFLTK 182
           +G F   +
Sbjct: 114 VGYFLCAR 121

Length = 259

>gnl|CDD|187589 cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid dehydrogenase (3alpha_HSD), classical (c) SDRs

 Score = 52.5 bits (126), Expect = 7e-08
 Identities = 35/140 (25%), Positives = 53/140 (37%), Gaps = 31/140 (22%)

Query: 63  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 122
           ++TGA SG+GAA A  L   G  V+ +                   D R      DLS+ 
Sbjct: 3   VITGAASGIGAATAELLEDAGHTVIGI-------------------DLREADVIADLSTP 43

Query: 123 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTK 182
           +       ++   L        +  L+N AG+  T+          ++  NY G   L +
Sbjct: 44  EGR---AAAIADVLARCS--GVLDGLVNCAGVGGTT------VAGLVLKVNYFGLRALME 92

Query: 183 LLLPLLKNSPVPSRIVNVTS 202
            LLP L+    P   V V+S
Sbjct: 93  ALLPRLRKGHGP-AAVVVSS 111

Bacterial 3-alpha_HSD, which catalyzes the NAD-dependent oxidoreduction of hydroxysteroids, is a dimeric member of the classical SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional

 Score = 52.6 bits (127), Expect = 8e-08
 Identities = 39/152 (25%), Positives = 67/152 (44%), Gaps = 29/152 (19%)

Query: 58  KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNK-----DARL 112
              V +VTGA+SG+G A A  L+R G+ V   G             TSRN         +
Sbjct: 3   NSKVALVTGASSGIGRATAEKLARAGYRV--FG-------------TSRNPARAAPIPGV 47

Query: 113 EAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMM 170
           E  ++D++   SV     +    ++       I +L+NNAG+     +   +      + 
Sbjct: 48  ELLELDVTDDASV----QAAVDEVIARA--GRIDVLVNNAGVGLAGAAEESSIAQAQALF 101

Query: 171 STNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 202
            TN  G   +T+ +LP ++ +    RI+N++S
Sbjct: 102 DTNVFGILRMTRAVLPHMR-AQGSGRIINISS 132

Length = 270

>gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

 Score = 52.6 bits (126), Expect = 8e-08
 Identities = 62/254 (24%), Positives = 100/254 (39%), Gaps = 43/254 (16%)

Query: 57  IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQ 116
           +K    IVTG   G+G A     + EG  V +   +     +  ADI  R K    +AF 
Sbjct: 1   LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADI--RAKGGNAQAFA 58

Query: 117 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAG--ILATSSRLTPEGYDQMMSTNY 174
            D++   SV     + +Q L   D      +L+NNAG       ++  P  ++++++ N 
Sbjct: 59  CDITDRDSVDTAVAAAEQALGPVD------VLVNNAGWDKFGPFTKTEPPLWERLIAINL 112

Query: 175 IGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARI 234
            GA  +   +LP +       RIVN+ S   R   + +                     +
Sbjct: 113 TGALHMHHAVLPGMVERG-AGRIVNIASDAARVGSSGEA--------------------V 151

Query: 235 YEYSKLCLLIFSYELHRNLGLDKSRH-VSVIAADPGVVKTNIMREV------PSFLSLMA 287
           Y   K  L+ FS  + R      +RH ++V    PG   T ++ ++      P  L   A
Sbjct: 152 YAACKGGLVAFSKTMAREH----ARHGITVNVVCPGPTDTALLDDICGGAENPEKL-REA 206

Query: 288 FTVLKLLGLLQSPE 301
           FT    LG L  P+
Sbjct: 207 FTRAIPLGRLGQPD 220

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250

>gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional

 Score = 52.0 bits (125), Expect = 1e-07
 Identities = 32/126 (25%), Positives = 59/126 (46%), Gaps = 12/126 (9%)

Query: 59  RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVD 118
             V I+TG +SG+G A A   + EG +VV+ GR+   L E   +I       ++   Q+D
Sbjct: 1   EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQ--FPGQVLTVQMD 58

Query: 119 LSSFQSVLKF-KDSLQQWLLDSDMHSSIQLLINNAG--ILATSSRLTPEGYDQMMSTNYI 175
           + + + V K  +   +++         I  LINNA    +  +  L+  G++ ++     
Sbjct: 59  VRNPEDVQKMVEQIDEKF-------GRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLN 111

Query: 176 GAFFLT 181
           G F+ +
Sbjct: 112 GTFYCS 117

Length = 252

>gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional

 Score = 51.7 bits (124), Expect = 1e-07
 Identities = 34/130 (26%), Positives = 63/130 (48%), Gaps = 16/130 (12%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           + +VTGAT+G G        ++G  V+  GR    L E   ++        L   Q+D+ 
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL-----GDNLYIAQLDVR 56

Query: 121 SFQSVLKFKDSL-QQWLLDSDMHSSIQLLINNAGI---LATSSRLTPEGYDQMMSTNYIG 176
           +  ++ +   SL  +W        +I +L+NNAG+   L  + + + E ++ M+ TN  G
Sbjct: 57  NRAAIEEMLASLPAEW-------RNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKG 109

Query: 177 AFFLTKLLLP 186
             ++T+ +LP
Sbjct: 110 LVYMTRAVLP 119

Length = 248

>gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional

 Score = 51.7 bits (124), Expect = 1e-07
 Identities = 34/146 (23%), Positives = 69/146 (47%), Gaps = 13/146 (8%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V ++TG ++GLG A A    +E   VV+  RS    +  +A+   +       A + D++
Sbjct: 9   VVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAE-EIKKAGGEAIAVKGDVT 67

Query: 121 SFQSVLKFKDSLQQWLLDS--DMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIG 176
               V+         L+ +      ++ ++INNAGI     S  ++ E ++++++TN  G
Sbjct: 68  VESDVVN--------LIQTAVKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTG 119

Query: 177 AFFLTKLLLPLLKNSPVPSRIVNVTS 202
           AF  ++  +       +   I+N++S
Sbjct: 120 AFLGSREAIKYFVEHDIKGNIINMSS 145

Length = 261

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 52.2 bits (125), Expect = 2e-07
 Identities = 37/168 (22%), Positives = 63/168 (37%), Gaps = 24/168 (14%)

Query: 44  SNPYKRCVPPITGIKRP-VCIVTGATSGLGAAAAYALSREGFHVVLV---GRSSHLLSET 99
           S P      P    + P V  +TG   G+G A A   +  G  ++++      +  L+E 
Sbjct: 253 SGPASTAQAPSPLAESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEA 312

Query: 100 MADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI---LA 156
           + D           + Q D++   +V      +Q           + +L+NNAGI     
Sbjct: 313 LGD--------EHLSVQADITDEAAVESAFAQIQARW------GRLDVLVNNAGIAEVFK 358

Query: 157 TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT 204
            S   + E + ++   N  GAF   +    L+    V   IVN+ S  
Sbjct: 359 PSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGV---IVNLGSIA 403

Length = 520

>gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases

 Score = 51.7 bits (124), Expect = 2e-07
 Identities = 50/225 (22%), Positives = 84/225 (37%), Gaps = 41/225 (18%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V +VTG   G+G   A  L+++GF V +   +     ET  +I      A   A+++D+S
Sbjct: 2   VALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAV--AYKLDVS 59

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL--TPEGYDQMMSTNYIGAF 178
               V    D   +     D      +++NNAG+   +  L  T E   ++ + N  G  
Sbjct: 60  DKDQVFSAIDQAAEKFGGFD------VMVNNAGVAPITPILEITEEELKKVYNVNVKGVL 113

Query: 179 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETI----TGKFFLRSKCYPCARI 234
           F  +      K      +I+N  S            N  +    + KF +R      A+ 
Sbjct: 114 FGIQAAARQFKKQGHGGKIINAASIA------GHEGNPILSAYSSTKFAVRGLTQTAAQ- 166

Query: 235 YEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV 279
                        EL         + ++V A  PG+VKT +  E+
Sbjct: 167 -------------EL-------APKGITVNAYCPGIVKTPMWEEI 191

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254

>gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional

 Score = 51.3 bits (123), Expect = 2e-07
 Identities = 42/158 (26%), Positives = 70/158 (44%), Gaps = 22/158 (13%)

Query: 59  RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVD 118
           R V I+TGA+ G+GAA A   +  G+ V L    +   +E +     R +     A   D
Sbjct: 2   RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAI-RRQGGEALAVAAD 60

Query: 119 LSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQM--------M 170
           ++    VL+  +++ + L        +  L+NNAGIL    RL     +QM         
Sbjct: 61  VADEADVLRLFEAVDREL------GRLDALVNNAGILEAQMRL-----EQMDAARLTRIF 109

Query: 171 STNYIGAFFLTKLLLPLL--KNSPVPSRIVNVTSFTHR 206
           +TN +G+F   +  +  +  ++      IVNV+S   R
Sbjct: 110 ATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAAR 147

Length = 248

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score = 51.6 bits (124), Expect = 2e-07
 Identities = 29/124 (23%), Positives = 52/124 (41%), Gaps = 13/124 (10%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V ++TGA SG+G A A     EG  VV+             +I        L+       
Sbjct: 8   VALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDV--TRQD 65

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGAF 178
           S   ++    +++++         I +L NNA +  +A    ++ + YD++ + N  G F
Sbjct: 66  SIDRIVAA--AVERF-------GGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLF 116

Query: 179 FLTK 182
           FL +
Sbjct: 117 FLMQ 120

Length = 257

>gnl|CDD|171820 PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

 Score = 51.5 bits (123), Expect = 2e-07
 Identities = 55/214 (25%), Positives = 88/214 (41%), Gaps = 39/214 (18%)

Query: 63  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 122
           +VTGA+ G+G   A  L  +G  V L G     L    A++  R K      F  +LS  
Sbjct: 10  LVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVK-----IFPANLSDR 64

Query: 123 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATS--SRLTPEGYDQMMSTNYIGAFFL 180
             V       +  L        + +L+NNAGI       R++ E +D ++  N    F L
Sbjct: 65  DEVKALGQKAEADL------EGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRL 118

Query: 181 TKLLL-PLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSK 239
           T+ L  P+++      RI+N+TS               +TG         P    Y  SK
Sbjct: 119 TRELTHPMMRRR--YGRIINITSVV------------GVTGN--------PGQANYCASK 156

Query: 240 LCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKT 273
             ++ FS  L + +    +R+V+V    PG +++
Sbjct: 157 AGMIGFSKSLAQEIA---TRNVTVNCVAPGFIES 187

Length = 245

>gnl|CDD|180822 PRK07069, PRK07069, short chain dehydrogenase; Validated

 Score = 51.2 bits (123), Expect = 2e-07
 Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 30/152 (19%)

Query: 64  VTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS--- 120
           +TGA  GLG A A  ++ +G  V             + DI   N  A L+AF  +++   
Sbjct: 4   ITGAAGGLGRAIARRMAEQGAKV------------FLTDI---NDAAGLDAFAAEINAAH 48

Query: 121 ----SFQSVLKFKDSLQQW--LLD--SDMHSSIQLLINNAGI--LATSSRLTPEGYDQMM 170
               +F +V    D   QW  LL   +D    + +L+NNAG+       ++  + + ++M
Sbjct: 49  GEGVAFAAVQDVTDE-AQWQALLAQAADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVM 107

Query: 171 STNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 202
           + N    F   K  LP L+ S  P+ IVN++S
Sbjct: 108 AINVESIFLGCKHALPYLRASQ-PASIVNISS 138

Length = 251

>gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional

 Score = 51.3 bits (123), Expect = 2e-07
 Identities = 37/148 (25%), Positives = 68/148 (45%), Gaps = 18/148 (12%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V +VTGA  GLGAA A A +  G  V++  R+   L E    I +  + A + A   DL+
Sbjct: 12  VAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVA--ADLA 69

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAG------ILATSSRLTPEGYDQMMSTNY 174
             ++       L    +++     + +++NN G      +L+TS++   + +    + N 
Sbjct: 70  HPEAT----AGLAGQAVEA--FGRLDIVVNNVGGTMPNPLLSTSTKDLADAF----TFNV 119

Query: 175 IGAFFLTKLLLPLLKNSPVPSRIVNVTS 202
             A  LT   +PL+        ++N++S
Sbjct: 120 ATAHALTVAAVPLMLEHSGGGSVINISS 147

Length = 263

>gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional

 Score = 51.6 bits (124), Expect = 2e-07
 Identities = 43/155 (27%), Positives = 68/155 (43%), Gaps = 29/155 (18%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQV--- 117
           V ++TG  SG+G A A   ++EG  + +V    +L     A+ T +    R+E   V   
Sbjct: 48  VALITGGDSGIGRAVAVLFAKEGADIAIV----YLDEHEDANETKQ----RVEKEGVKCL 99

Query: 118 ----DLSSFQSVLKF-KDSLQQWLLDSDMHSSIQLLINNAGILATSSR---LTPEGYDQM 169
               D+S       F KD++++ + +      + +L+NNA           +T E  D+ 
Sbjct: 100 LIPGDVSDEA----FCKDAVEETVRE---LGRLDILVNNAAFQYPQQSLEDITAEQLDKT 152

Query: 170 MSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT 204
             TN    F +TK  LP LK     S I+N  S T
Sbjct: 153 FKTNIYSYFHMTKAALPHLKQG---SAIINTGSIT 184

Length = 290

>gnl|CDD|219957 pfam08659, KR, KR domain

 Score = 49.4 bits (119), Expect = 3e-07
 Identities = 28/115 (24%), Positives = 55/115 (47%), Gaps = 14/115 (12%)

Query: 63  IVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITS-RNKDARLEAFQVDLS 120
           +VTG   GLG   A  L+  G  H+VL+ RS     E  A +     + A +     D+S
Sbjct: 4   LVTGGLGGLGLELARWLAERGARHLVLLSRSGAPDPEAEALLAELEARGAEVTVVACDVS 63

Query: 121 SFQSVLKFKDSLQQWL--LDSDMHSSIQLLINNAGILATS--SRLTPEGYDQMMS 171
                   +D+++  L  + +D    ++ +I+ AG+L  +  + +T E + ++++
Sbjct: 64  D-------RDAVRALLAEIRADGP-PLRGVIHAAGVLRDALLANMTAEDFARVLA 110

This enzymatic domain is part of bacterial polyketide synthases and catalyzes the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 181

>gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 50.7 bits (121), Expect = 3e-07
 Identities = 30/144 (20%), Positives = 59/144 (40%), Gaps = 10/144 (6%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
             +VTGA SG+G   A  L+R G  V +   +    +    +I       +     +D++
Sbjct: 9   TAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAG--GKAIGVAMDVT 66

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGAF 178
           +  +V    D + +         S+ +L++NAGI  +      +   + +M + +  GAF
Sbjct: 67  NEDAVNAGIDKVAERF------GSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAF 120

Query: 179 FLTKLLLPLLKNSPVPSRIVNVTS 202
             TK  L  +        ++ + S
Sbjct: 121 LTTKAALKHMYKDDRGGVVIYMGS 144

Length = 262

>gnl|CDD|187664 cd09763, DHRS1-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs

 Score = 50.5 bits (121), Expect = 3e-07
 Identities = 51/239 (21%), Positives = 89/239 (37%), Gaps = 58/239 (24%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHL-LSETMADITSRNKDARLEAFQVDL 119
           + +VTGA+ G+G   A  L   G  V + GR+    L  T  +I +R    +    + D 
Sbjct: 5   IALVTGASRGIGRGIALQLGEAGATVYITGRTILPQLPGTAEEIEARG--GKCIPVRCDH 62

Query: 120 SSFQSVLKFKDSL---QQWLLDSDMHSSIQLLINNA-----GILATSSR----LTPEGYD 167
           S    V    + +   QQ  LD        +L+NNA      IL   ++      P  +D
Sbjct: 63  SDDDEVEALFERVAREQQGRLD--------ILVNNAYAAVQLILVGVAKPFWEEPPTIWD 114

Query: 168 QMMST----NYIGAFFLTKLLLPLLKNSPVPSRIVNVTS-FTHRNVFNAQVNNETITGKF 222
            + +     +Y  + +   L++   K       IV ++S      +FN            
Sbjct: 115 DINNVGLRAHYACSVYAAPLMVKAGK-----GLIVIISSTGGLEYLFNVA---------- 159

Query: 223 FLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS 281
                       Y   K  +   + ++   L   K   V+V++  PG V+T ++ E+P 
Sbjct: 160 ------------YGVGKAAIDRMAADMAHEL---KPHGVAVVSLWPGFVRTELVLEMPE 203

This subgroup includes human DHRS1 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 265

>gnl|CDD|236207 PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 51.4 bits (124), Expect = 4e-07
 Identities = 39/151 (25%), Positives = 70/151 (46%), Gaps = 28/151 (18%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVL--VGRSSHLLSETMADITSRNKDARLEAFQVD 118
           V +VTGA  G+GAA A  L+R+G HVV   V  +   L+     +          A  +D
Sbjct: 212 VALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRV-------GGTALALD 264

Query: 119 LSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI-----LATSSRLTPEGYDQMMSTN 173
           +++  +  +  + L      ++ H  + ++++NAGI     LA    +    +D +++ N
Sbjct: 265 ITAPDAPARIAEHL------AERHGGLDIVVHNAGITRDKTLA---NMDEARWDSVLAVN 315

Query: 174 YIGAFFLTKLLLP--LLKNSPVPSRIVNVTS 202
            +    +T+ LL    L +     RIV V+S
Sbjct: 316 LLAPLRITEALLAAGALGDGG---RIVGVSS 343

Length = 450

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score = 50.4 bits (121), Expect = 4e-07
 Identities = 40/163 (24%), Positives = 65/163 (39%), Gaps = 39/163 (23%)

Query: 56  GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADIT-SRNKDARLEA 114
            ++  + IVTG +SG+G A    L   G +VV             ADI     +    + 
Sbjct: 6   NLQGKIIIVTGGSSGIGLAIVKELLANGANVV------------NADIHGGDGQHENYQF 53

Query: 115 FQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL-----TPEG---- 165
              D+SS + V      + +          I  L+NNAGI     RL      P G    
Sbjct: 54  VPTDVSSAEEVNHTVAEIIE------KFGRIDGLVNNAGI--NIPRLLVDEKDPAGKYEL 105

Query: 166 ----YDQMMSTNYIGAFFLTKLLLPLL--KNSPVPSRIVNVTS 202
               +D+M + N  G F +++ +   +  ++  V   IVN++S
Sbjct: 106 NEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGV---IVNMSS 145

Length = 266

>gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional

 Score = 50.3 bits (121), Expect = 5e-07
 Identities = 38/156 (24%), Positives = 61/156 (39%), Gaps = 24/156 (15%)

Query: 52  PPITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDAR 111
             + G    V  +TG   G+G A A AL+  G  V +      L  ET A++        
Sbjct: 1   DDLRG---KVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG------L 51

Query: 112 LEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL--TPEGYDQM 169
           +    +D++   S   F D++            I +L+NNAG++     L        ++
Sbjct: 52  VVGGPLDVTDPASFAAFLDAV------EADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRI 105

Query: 170 MSTNYIGAFFLTKLLLPLLKNSPVPSR---IVNVTS 202
           +  N  G    +KL  P +    VP     +VNV S
Sbjct: 106 LDVNVYGVILGSKLAAPRM----VPRGRGHVVNVAS 137

Length = 273

>gnl|CDD|181668 PRK09135, PRK09135, pteridine reductase; Provisional

 Score = 49.9 bits (120), Expect = 5e-07
 Identities = 37/155 (23%), Positives = 62/155 (40%), Gaps = 28/155 (18%)

Query: 58  KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQV 117
              V ++TG    +GAA A  L   G+ V +    S   ++ +A   +  +     A Q 
Sbjct: 5   SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQA 64

Query: 118 DLSSFQSVLKF-KDSLQQW-LLDSDMHSSIQLLINNAGILATSS-------RLTPEGYDQ 168
           DL    ++ +     +  +  LD         L+NNA     SS        +T   +D 
Sbjct: 65  DLLDPDALPELVAACVAAFGRLD--------ALVNNA-----SSFYPTPLGSITEAQWDD 111

Query: 169 MMSTNYIGAFFLTKLLLPLLKNSPVPSR--IVNVT 201
           + ++N    FFL++   P L+      R  IVN+T
Sbjct: 112 LFASNLKAPFFLSQAAAPQLR----KQRGAIVNIT 142

Length = 249

>gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

 Score = 49.9 bits (120), Expect = 5e-07
 Identities = 30/96 (31%), Positives = 44/96 (45%), Gaps = 15/96 (15%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V +VTGA  G+G   A   + EG  VVLV RS  L+ E  A++ +   +A   A   DL 
Sbjct: 10  VVVVTGAAQGIGRGVALRAAAEGARVVLVDRSE-LVHEVAAELRAAGGEAL--ALTADLE 66

Query: 121 SF---QSVLKFKDSLQQWLLDSDMHSSIQLLINNAG 153
           ++   Q+ +             +    I +LINN G
Sbjct: 67  TYAGAQAAMAAA---------VEAFGRIDVLINNVG 93

Length = 260

>gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated

 Score = 49.9 bits (120), Expect = 6e-07
 Identities = 43/152 (28%), Positives = 63/152 (41%), Gaps = 24/152 (15%)

Query: 55  TGIKRPVCIVTGATSGLGAA-AAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLE 113
             IK  V +VTGA  G+G A     L+R    V    R      E++ D+       R+ 
Sbjct: 2   MDIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDP----ESVTDL-----GPRVV 52

Query: 114 AFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL---TPEGYDQMM 170
             Q+D++   SV     +  +   D      + +L+NNAGI  T S L     +     M
Sbjct: 53  PLQLDVTDPASV----AAAAEAASD------VTILVNNAGIFRTGSLLLEGDEDALRAEM 102

Query: 171 STNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 202
            TNY G   + +   P+L  +     IVNV S
Sbjct: 103 ETNYFGPLAMARAFAPVLAANG-GGAIVNVLS 133

Length = 238

>gnl|CDD|187582 cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatty acid synthase (FAS), complex (x) SDRs

 Score = 50.5 bits (121), Expect = 6e-07
 Identities = 30/129 (23%), Positives = 51/129 (39%), Gaps = 10/129 (7%)

Query: 62  CIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
            ++TG   GLG   A  L+  G  H+VL+ R              R   AR+   + D++
Sbjct: 153 YLITGGLGGLGLLVARWLAARGARHLVLLSRRGPAPRAAARAALLRAGGARVSVVRCDVT 212

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAF 178
              ++      L            +  +I+ AG+L  A  + LTP  +  +++    GA 
Sbjct: 213 DPAALAALLAELAA-------GGPLAGVIHAAGVLRDALLAELTPAAFAAVLAAKVAGAL 265

Query: 179 FLTKLLLPL 187
            L +L   L
Sbjct: 266 NLHELTPDL 274

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. In some instances, such as porcine FAS, an enoyl reductase (ER) module is inserted between the sub-domains. Fatty acid synthesis occurs via the stepwise elongation of a chain (which is attached to acyl carrier protein, ACP) with 2-carbon units. Eukaryotic systems consist of large, multifunctional synthases (type I) while bacterial, type II systems, use single function proteins. Fungal fatty acid synthase uses a dodecamer of 6 alpha and 6 beta subunits. In mammalian type FAS cycles, ketoacyl synthase forms acetoacetyl-ACP which is reduced by the NADP-dependent beta-KR, forming beta-hydroxyacyl-ACP, which is in turn dehydrated by dehydratase to a beta-enoyl intermediate, which is reduced by NADP-dependent beta-ER. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 375

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score = 49.6 bits (119), Expect = 6e-07
 Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 9/121 (7%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V IVTG + G+G A A AL+  G  V ++  S+    E   ++  +    + +A++ D+S
Sbjct: 10  VAIVTGGSRGIGLAIARALAEAGADVAIIYNSAPRAEEKAEELAKKY-GVKTKAYKCDVS 68

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL--TPEGYDQMMSTNYIGAF 178
           S +SV   + + +Q  +  D    I +LI NAGI      L  T E +++++  N  G F
Sbjct: 69  SQESV---EKTFKQ--IQKD-FGKIDILIANAGITVHKPALDYTYEQWNKVIDVNLNGVF 122

Query: 179 F 179
            
Sbjct: 123 N 123

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|181120 PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 49.8 bits (119), Expect = 7e-07
 Identities = 46/153 (30%), Positives = 73/153 (47%), Gaps = 22/153 (14%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHL-LSETMADITSRNKDARLEAFQVDL 119
           V +VTGA +GLG A A  L+R G  VV+   +S L  S+ + +I  R   A+  A   D+
Sbjct: 14  VAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEI--RAAGAKAVAVAGDI 71

Query: 120 SSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSR----LTPEGYDQMMSTNYI 175
           S   +     D L   +  +     + +++NNAGI  T  R    ++ E +D +++ +  
Sbjct: 72  SQRATA----DEL---VATAVGLGGLDIVVNNAGI--TRDRMLFNMSDEEWDAVIAVHLR 122

Query: 176 GAFFLTKLLLPLLK------NSPVPSRIVNVTS 202
           G F LT+      +        PV  RIVN +S
Sbjct: 123 GHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSS 155

Length = 306

>gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 48.9 bits (117), Expect = 1e-06
 Identities = 33/146 (22%), Positives = 66/146 (45%), Gaps = 12/146 (8%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLV-GRSSHLLSETMADITSRNKDARLEAFQVDL 119
           V +VTG++ G+G A A  L+ EG+ + +   RS     ET  +I +  + A   A + ++
Sbjct: 6   VALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKA--LAVKANV 63

Query: 120 SSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNA--GILATSSRLTPEGYDQMMSTNYIGA 177
              + +   K+   Q     +    + + +NNA  G+L  +  L    +D  M+ N    
Sbjct: 64  GDVEKI---KEMFAQID---EEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKAL 117

Query: 178 FFLTKLLLPLLKNSPVPSRIVNVTSF 203
            F  +    L++      +I++++S 
Sbjct: 118 LFCAQEAAKLMEKVG-GGKIISLSSL 142

Length = 250

>gnl|CDD|187663 cd09762, HSDL2_SDR_c, human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 48.6 bits (116), Expect = 1e-06
 Identities = 44/154 (28%), Positives = 69/154 (44%), Gaps = 32/154 (20%)

Query: 64  VTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNK--------------D 109
           +TGA+ G+G A A   +R+G +VV+  +++    +    I +  +              D
Sbjct: 8   ITGASRGIGKAIALKAARDGANVVIAAKTAEPHPKLPGTIYTAAEEIEAAGGKALPCIVD 67

Query: 110 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNA-GILATSSRLTP-EGYD 167
            R E  QV  +  ++V KF                I +L+NNA  I  T +  TP + YD
Sbjct: 68  IRDED-QVRAAVEKAVEKF--------------GGIDILVNNASAISLTGTLDTPMKRYD 112

Query: 168 QMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVT 201
            MM  N  G +  +K  LP LK S  P  I+N++
Sbjct: 113 LMMGVNTRGTYLCSKACLPYLKKSKNP-HILNLS 145

This subgroup includes human HSDL2 and related protens. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 48.2 bits (115), Expect = 2e-06
 Identities = 49/236 (20%), Positives = 93/236 (39%), Gaps = 46/236 (19%)

Query: 57  IKRPVCIVTGATSGLGAAAAYALSREGFHVVL-VGRSSHLLSETMADITSRNKDARLEAF 115
           +K  V +VTG+  G+G A A  L++EG  VV+   + +  ++ET+  +     +      
Sbjct: 4   LKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIG--V 61

Query: 116 QVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI------LATSSRLTPEGYDQM 169
             D+S+ +       +        D +    +L+NNAG+      L    +L     D+ 
Sbjct: 62  LADVSTREGCETLAKATI------DRYGVADILVNNAGLGLFSPFLNVDDKLI----DKH 111

Query: 170 MSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCY 229
           +ST++    + ++ L   ++       IVN+ S               + G      +  
Sbjct: 112 ISTDFKSVIYCSQELAKEMREG---GAIVNIAS---------------VAG-----IRPA 148

Query: 230 PCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSL 285
               IY   K  ++     L + L L+ +  + V A  PG VKT +   +   L +
Sbjct: 149 YGLSIYGAMKAAVI----NLTKYLALELAPKIRVNAIAPGFVKTKLGESLFKVLGM 200

Length = 252

>gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR

 Score = 48.2 bits (115), Expect = 2e-06
 Identities = 39/150 (26%), Positives = 62/150 (41%), Gaps = 19/150 (12%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V +VTGA+ GLGAA A + +REG  VV+    ++  S   A+  +     R  A Q D+ 
Sbjct: 2   VVLVTGASRGLGAAIARSFAREGARVVV----NYYRSTESAEAVAAEAGERAIAIQADVR 57

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--------LATSSRLTPEGYDQMMST 172
               V    +  +           +  ++NNA I          T   +  E Y Q +  
Sbjct: 58  DRDQVQAMIEEAKNHF------GPVDTIVNNALIDFPFDPDQRKTFDTIDWEDYQQQLEG 111

Query: 173 NYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 202
              GA  L + +LP  K      R++N+ +
Sbjct: 112 AVKGALNLLQAVLPDFKERGS-GRVINIGT 140

This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase

 Score = 48.2 bits (115), Expect = 2e-06
 Identities = 35/146 (23%), Positives = 64/146 (43%), Gaps = 14/146 (9%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNK--DARLEAFQVD 118
           + +VTG   G+G A    L+++G+ V     +     E                   + D
Sbjct: 2   IALVTGGMGGIGTAICQRLAKDGYRVA---ANCGPNEERAEAWLQEQGALGFDFRVVEGD 58

Query: 119 LSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIG 176
           +SSF+S       ++  L        I +L+NNAGI   AT  ++T E +  ++ TN   
Sbjct: 59  VSSFESCKAAVAKVEAEL------GPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNS 112

Query: 177 AFFLTKLLLPLLKNSPVPSRIVNVTS 202
            F +T+ ++  ++      RI+N++S
Sbjct: 113 VFNVTQPVIDGMRERGW-GRIINISS 137

This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242

>gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR

 Score = 48.3 bits (115), Expect = 2e-06
 Identities = 41/159 (25%), Positives = 69/159 (43%), Gaps = 23/159 (14%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V +VTGA  G+G   A  L+ EG  V+LV RS  L+ E +A+I +            DL 
Sbjct: 6   VVVVTGAAQGIGRGVAERLAGEGARVLLVDRSE-LVHEVLAEILAAG--DAAHVHTADLE 62

Query: 121 SFQSVLKFKDSLQQWLLDS--DMHSSIQLLINNAG--ILATSSRLTPEGYDQMMST---N 173
           ++           Q ++ +  +    + +LINN G  I A       E  +Q+ +    +
Sbjct: 63  TYAGA--------QGVVRAAVERFGRVDVLINNVGGTIWAKPYEHYEE--EQIEAEIRRS 112

Query: 174 YIGAFFLTKLLLP-LLKNSPVPSRIVNVTSFTHRNVFNA 211
                +  + +LP +L+       IVNV+S   R ++  
Sbjct: 113 LFPTLWCCRAVLPHMLERQ--QGVIVNVSSIATRGIYRI 149

DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional

 Score = 47.9 bits (114), Expect = 3e-06
 Identities = 41/154 (26%), Positives = 64/154 (41%), Gaps = 14/154 (9%)

Query: 59  RPVCIVTGATSGLGAAAAYALSREGFHV-VLVGRSSHLLSETMADITSRNKDARLEAFQV 117
           R V ++TGA+ G+G A A   +  G+ V +   R +    ET   +  R    R      
Sbjct: 2   RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAV--RAAGGRACVVAG 59

Query: 118 DLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQ---MMSTNY 174
           D+++   V+   D++Q           +  L+NNAGI+A S  L      +   M  TN 
Sbjct: 60  DVANEADVIAMFDAVQSAF------GRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNV 113

Query: 175 IGAFFLTKLLLPLLKNSP--VPSRIVNVTSFTHR 206
           +GA+   +     L          IVNV+S   R
Sbjct: 114 LGAYLCAREAARRLSTDRGGRGGAIVNVSSIASR 147

Length = 248

>gnl|CDD|235910 PRK07024, PRK07024, short chain dehydrogenase; Provisional

 Score = 48.0 bits (115), Expect = 3e-06
 Identities = 36/121 (29%), Positives = 53/121 (43%), Gaps = 22/121 (18%)

Query: 64  VTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQ 123
           +TGA+SG+G A A   +R+G  + LV R +  L    A      K AR+  +  D+    
Sbjct: 7   ITGASSGIGQALAREYARQGATLGLVARRTDALQAFAA---RLPKAARVSVYAADVRDAD 63

Query: 124 SVLKF-KDSLQQWLLDSDMHSSIQLLINNAGILATSSR--LTPEGYD-----QMMSTNYI 175
           ++     D +         H    ++I NAGI    S   LT E  D     ++M TNY 
Sbjct: 64  ALAAAAADFIAA-------HGLPDVVIANAGI----SVGTLTEEREDLAVFREVMDTNYF 112

Query: 176 G 176
           G
Sbjct: 113 G 113

Length = 257

>gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional

 Score = 47.7 bits (114), Expect = 3e-06
 Identities = 35/148 (23%), Positives = 64/148 (43%), Gaps = 12/148 (8%)

Query: 59  RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVD 118
           + V +   A +G+G+A A     EG  VV+       L ET  ++ +     R+EA   D
Sbjct: 18  KVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCD 77

Query: 119 LSSFQSVLKFKDSLQQWLLDS--DMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNY 174
           ++S   V          L+D+  +    + +L+NNAG+   +    +T + + +++    
Sbjct: 78  VTSEAQV--------DALIDAAVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTL 129

Query: 175 IGAFFLTKLLLPLLKNSPVPSRIVNVTS 202
            G F  T+  L  ++       IVN  S
Sbjct: 130 TGTFRATRAALRYMRARGHGGVIVNNAS 157

Length = 262

>gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional

 Score = 47.3 bits (113), Expect = 4e-06
 Identities = 50/236 (21%), Positives = 82/236 (34%), Gaps = 69/236 (29%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGR---SSHLLSETM--------ADITSRNKD 109
           V IVTG  + +GAA A AL   G  V +V     +   ++ ++         DIT    D
Sbjct: 8   VAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITD---D 64

Query: 110 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL----ATSSRLTPEG 165
           A +E       +  +V+                  + +L+N A         SSR     
Sbjct: 65  AAIER------AVATVV-------------ARFGRVDILVNLACTYLDDGLASSR---AD 102

Query: 166 YDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLR 225
           +   +  N + A  L +   P L        IVN TS +                     
Sbjct: 103 WLAALDVNLVSAAMLAQAAHPHLARG--GGAIVNFTSIS--------------------- 139

Query: 226 SKCYPCAR-IYEYSKLCLLIFSYELHRNLGLD-KSRHVSVIAADPGVVKTNIMREV 279
           +K     R +Y  SK  +     +L R++ +D     + V +  PG   + +M E+
Sbjct: 140 AKFAQTGRWLYPASKAAIR----QLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDEL 191

Length = 261

>gnl|CDD|234422 TIGR03971, SDR_subfam_1, oxidoreductase, SDR family

 Score = 46.8 bits (111), Expect = 6e-06
 Identities = 31/142 (21%), Positives = 60/142 (42%), Gaps = 21/142 (14%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVL------VGRSSHLLSETMADI--TSRNKDA-- 110
           V  +TGA  G G A A  L+ EG  ++       +         T  D+  T+R  +A  
Sbjct: 5   VAFITGAARGQGRAHAVRLAAEGADIIAIDLCAPLSDYPTYPLATREDLDETARLVEALG 64

Query: 111 -RLEAFQVDLSSFQSVLKFKDSLQQWLLDS-DMHSSIQLLINNAGIL--ATSSRLTPEGY 166
            ++ A + D+            ++  + D  +    + +++ NAG+L    S  L+ E +
Sbjct: 65  RKVLARKADVRDL-------AEVRAVVEDGVEQFGRLDVVVANAGVLSYGRSWELSEEQW 117

Query: 167 DQMMSTNYIGAFFLTKLLLPLL 188
           D ++  N  G +   K ++P +
Sbjct: 118 DTVLDINLTGVWRTCKAVVPHM 139

Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. Members of the present subfamily may occur several to a genome and are largely restricted to genomes that contain members of families TIGR03962, TIGR03967, and TIGR03969. Many members have been annotated by homology as carveol dehydrogenases. Length = 265

>gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR

 Score = 46.8 bits (111), Expect = 6e-06
 Identities = 53/227 (23%), Positives = 86/227 (37%), Gaps = 60/227 (26%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLV------GRSSHLLSETMA-----DITSRNKD 109
             ++TG+  G+G A A A  REG  V +        R++       A     D+T +   
Sbjct: 5   TALITGSARGIGRAFAQAYVREGARVAIADINLEAARATAAEIGPAACAISLDVTDQASI 64

Query: 110 ARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYD 167
            R  A  VD               +W        SI +L+NNA +  LA    +T E YD
Sbjct: 65  DRCVAALVD---------------RW-------GSIDILVNNAALFDLAPIVDITRESYD 102

Query: 168 QMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSK 227
           ++ + N  G  F+ + +   +       +I+N+ S   R         E + G +     
Sbjct: 103 RLFAINVSGTLFMMQAVARAMIAQGRGGKIINMASQAGR-------RGEALVGVY----- 150

Query: 228 CYPCARIYEYSKLCLLIFSYELHRNLGLDKSRH-VSVIAADPGVVKT 273
           C   A +   ++            + GL+  RH ++V A  PGVV  
Sbjct: 151 CATKAAVISLTQ------------SAGLNLIRHGINVNAIAPGVVDG 185

This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254

>gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional

 Score = 46.9 bits (112), Expect = 7e-06
 Identities = 49/226 (21%), Positives = 85/226 (37%), Gaps = 44/226 (19%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V ++TGA SG G A A   +  G  +VL       L   +A++ ++   A +   + D+S
Sbjct: 8   VAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQG--AEVLGVRTDVS 65

Query: 121 SFQSVLKFKDSLQQWLLDSDMHS--SIQLLINNAGILATSSRL---TPEGYDQMMSTNYI 175
               V        + L D+ +    ++ LL NNAG+      +   +   ++ ++  N  
Sbjct: 66  DAAQV--------EALADAALERFGAVHLLFNNAGV-GAGGLVWENSLADWEWVLGVNLW 116

Query: 176 GAFFLTKLLLPLL--KNSPVPSR---IVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYP 230
           G     +   PL+       P+    IVN  S     +                     P
Sbjct: 117 GVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMA--GLLAP------------------P 156

Query: 231 CARIYEYSKLCLLIFSYELHRNLGLDKSR-HVSVIAADPGVVKTNI 275
              IY  SK  ++  +  L+++L L   +   SV+   P  V T I
Sbjct: 157 AMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLC--PYFVPTGI 200

Length = 287

>gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR

 Score = 46.2 bits (110), Expect = 8e-06
 Identities = 29/134 (21%), Positives = 62/134 (46%), Gaps = 18/134 (13%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V IVTGA SG G   A   ++EG  VV+      + ++    + +   +A + A Q D++
Sbjct: 7   VAIVTGAGSGFGEGIARRFAQEGARVVIA----DINADGAERVAADIGEAAI-AIQADVT 61

Query: 121 SFQSVLKFKDSLQQWLLDSDMH--SSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYI 175
                   +  ++  ++++ +     + +L+NNAGI         +  E +D++ + N  
Sbjct: 62  K-------RADVEA-MVEAALSKFGRLDILVNNAGITHRNKPMLEVDEEEFDRVFAVNVK 113

Query: 176 GAFFLTKLLLPLLK 189
             +   + L+P ++
Sbjct: 114 SIYLSAQALVPHME 127

This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248

>gnl|CDD|169556 PRK08703, PRK08703, short chain dehydrogenase; Provisional

 Score = 46.1 bits (109), Expect = 8e-06
 Identities = 39/154 (25%), Positives = 57/154 (37%), Gaps = 20/154 (12%)

Query: 52  PPITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDA- 110
             ++       +VTGA+ GLG   A A +  G  V+LV R    L +    I        
Sbjct: 2   ATLSD---KTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEP 58

Query: 111 ---RLEAFQVDLSSF-QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGY 166
              R +    +   F Q      ++ Q   LD  +H         AG     S L  +  
Sbjct: 59  FAIRFDLMSAEEKEFEQFAATIAEATQG-KLDGIVHC--------AGYFYALSPLDFQTV 109

Query: 167 DQMMST---NYIGAFFLTKLLLPLLKNSPVPSRI 197
            + ++    N +    LT+ L PLLK SP  S I
Sbjct: 110 AEWVNQYRINTVAPMGLTRALFPLLKQSPDASVI 143

Length = 239

>gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional

 Score = 46.5 bits (111), Expect = 9e-06
 Identities = 32/130 (24%), Positives = 58/130 (44%), Gaps = 13/130 (10%)

Query: 52  PPITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDAR 111
           PP+T +   V +VTGA  G+GA  A  L   G  + LV      L+   A++   ++   
Sbjct: 2   PPMTSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLT 61

Query: 112 LEAFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLT--PEGYDQ 168
           + A   DL++ Q+  +   +              I +++ NAGI +  S     P+ + +
Sbjct: 62  VVADVTDLAAMQAAAEEAVERF----------GGIDVVVANAGIASGGSVAQVDPDAFRR 111

Query: 169 MMSTNYIGAF 178
           ++  N +G F
Sbjct: 112 VIDVNLLGVF 121

Length = 296

>gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional

 Score = 46.2 bits (110), Expect = 1e-05
 Identities = 29/132 (21%), Positives = 61/132 (46%), Gaps = 10/132 (7%)

Query: 57  IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQ 116
           +K  + ++TGA+ G+G A A A ++ G  +V    +  L+ + +A       +A    + 
Sbjct: 8   LKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAH--GYV 65

Query: 117 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL--TPEGYDQMMSTNY 174
            D++    V      +++          I +L+NNAGI+     L  + E + Q++  + 
Sbjct: 66  CDVTDEDGVQAMVSQIEK------EVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDL 119

Query: 175 IGAFFLTKLLLP 186
              F ++K ++P
Sbjct: 120 NAPFIVSKAVIP 131

Length = 265

>gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs

 Score = 46.6 bits (111), Expect = 1e-05
 Identities = 29/116 (25%), Positives = 53/116 (45%), Gaps = 16/116 (13%)

Query: 64  VTGATSGLGAA-AAYALSREGFHVVLVGRSS-HLLSETMADITSRNKD--ARLEAFQVDL 119
           VTG   G+G A A     R G  +VL+GRS      E  A   +  +   AR+     D+
Sbjct: 210 VTGGAGGIGRALARALARRYGARLVLLGRSPLPPEEEWKAQTLAALEALGARVLYISADV 269

Query: 120 SSFQSVLKFKDSLQQWLLDS--DMHSSIQLLINNAGILATSS--RLTPEGYDQMMS 171
           +   +V        + LL+   + + +I  +I+ AG+L  +   + T E ++ +++
Sbjct: 270 TDAAAV--------RRLLEKVRERYGAIDGVIHAAGVLRDALLAQKTAEDFEAVLA 317

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436

>gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional

 Score = 46.1 bits (110), Expect = 1e-05
 Identities = 39/150 (26%), Positives = 59/150 (39%), Gaps = 22/150 (14%)

Query: 59  RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVD 118
               ++TG +SG G A A A    G  VV   RS        AD  + + D R  A  +D
Sbjct: 4   MKTWLITGVSSGFGRALAQAALAAGHRVVGTVRS----EAARADFEALHPD-RALARLLD 58

Query: 119 LSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIG 176
           ++ F ++       +           I +L+NNAG                +    N  G
Sbjct: 59  VTDFDAIDAVVADAE------ATFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFG 112

Query: 177 AFFLTKLLLPLLKNSPVPSR----IVNVTS 202
           A  +TK +LP ++     +R    IVN+TS
Sbjct: 113 AVAMTKAVLPGMR-----ARRRGHIVNITS 137

Length = 277

>gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs

 Score = 45.9 bits (109), Expect = 1e-05
 Identities = 39/142 (27%), Positives = 63/142 (44%), Gaps = 18/142 (12%)

Query: 63  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 122
           IVTGA  G+G A A  L + G  V+ +     LL E             L    +D++  
Sbjct: 2   IVTGAAQGIGRAVARHLLQAGATVIALDLPFVLLLE---------YGDPLRLTPLDVADA 52

Query: 123 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFL 180
            +V   ++   + L +   H  I  L+N AG+L    +  L+ E ++Q  + N  G F L
Sbjct: 53  AAV---REVCSRLLAE---HGPIDALVNCAGVLRPGATDPLSTEDWEQTFAVNVTGVFNL 106

Query: 181 TKLLLPLLKNSPVPSRIVNVTS 202
            + + P +K+    + IV V S
Sbjct: 107 LQAVAPHMKDRRTGA-IVTVAS 127

2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional

 Score = 45.5 bits (108), Expect = 1e-05
 Identities = 42/169 (24%), Positives = 66/169 (39%), Gaps = 32/169 (18%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVG-RSSHLLSETMADITSRNKDARLEAFQVDL 119
           V  VTGA SG+G   A  L++ G  V L   R+   L+ET   I +  + A       D+
Sbjct: 10  VAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRA--IQIAADV 67

Query: 120 SSFQS----VLKFKDSLQQWLLDSDMHSSIQLLINNAGILAT--SSRLTPEGYDQMMSTN 173
           +S       V + +  L           ++ L +N AGI     +  +  E +  +M  N
Sbjct: 68  TSKADLRAAVARTEAEL----------GALTLAVNAAGIANANPAEEMEEEQWQTVMDIN 117

Query: 174 YIGAFFLTK----LLLPLLKNSPVPSRIVNVTSFT----HRNVFNAQVN 214
             G F   +     +L     S     IVN+ S +    +R +  A  N
Sbjct: 118 LTGVFLSCQAEARAMLENGGGS-----IVNIASMSGIIVNRGLLQAHYN 161

Length = 254

>gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8

 Score = 45.4 bits (108), Expect = 2e-05
 Identities = 37/148 (25%), Positives = 71/148 (47%), Gaps = 13/148 (8%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           + ++TGA   +G A   AL   G  ++L   ++  L +   ++T+  K  R+ A ++D++
Sbjct: 4   IILITGAAGLIGKAFCKALLSAGARLILADINAPALEQLKEELTNLYK-NRVIALELDIT 62

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRL---TPEGYDQMMSTNYI 175
           S +S+ +  +S        +    I +LINNA        SR      E ++++++ N  
Sbjct: 63  SKESIKELIESYL------EKFGRIDILINNAYPSPKVWGSRFEEFPYEQWNEVLNVNLG 116

Query: 176 GAFFLTKLLLPLLKNSPVPSRIVNVTSF 203
           GAF  ++  + L K     S I+N+ S 
Sbjct: 117 GAFLCSQAFIKLFKKQGKGS-IINIASI 143

This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional

 Score = 45.1 bits (107), Expect = 2e-05
 Identities = 36/145 (24%), Positives = 55/145 (37%), Gaps = 25/145 (17%)

Query: 63  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 122
           +VTGAT G+G A +  L+  G  V+ + RS+               D   E F  DL+  
Sbjct: 7   LVTGATKGIGLALSLRLANLGHQVIGIARSA-------------IDDFPGELFACDLADI 53

Query: 123 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMST---NYIGAFF 179
           +       +L Q      + +    ++NN GI A    L       +      N   A  
Sbjct: 54  EQT---AATLAQINEIHPVDA----IVNNVGI-ALPQPLGKIDLAALQDVYDLNVRAAVQ 105

Query: 180 LTKLLLPLLKNSPVPSRIVNVTSFT 204
           +T+  L  +K      RIVN+ S  
Sbjct: 106 VTQAFLEGMKLREQ-GRIVNICSRA 129

Length = 234

>gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional

 Score = 45.1 bits (107), Expect = 2e-05
 Identities = 29/119 (24%), Positives = 55/119 (46%), Gaps = 10/119 (8%)

Query: 63  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 122
           +VTG++ G+G A A  L++ G  V+L GR    L+     +  +   A   AF  D++  
Sbjct: 14  LVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAF--DVTDH 71

Query: 123 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATS--SRLTPEGYDQMMSTNYIGAFF 179
            +V    D+ +           I +L+NNAG+   +       + +++++ TN    F+
Sbjct: 72  DAVRAAIDAFEA------EIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFY 124

Length = 255

>gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs

 Score = 45.2 bits (107), Expect = 2e-05
 Identities = 33/147 (22%), Positives = 59/147 (40%), Gaps = 22/147 (14%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V ++T A  G+G A A A +REG +V+    +   L E         +   +    +D++
Sbjct: 4   VALITAAAQGIGRAIALAFAREGANVIATDINEEKLKEL-------ERGPGITTRVLDVT 56

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL--TPEGYDQMMSTNYIGAF 178
             + V        +          I +L N AG +   S L    + +D  M+ N    +
Sbjct: 57  DKEQVAALAKEEGR----------IDVLFNCAGFVHHGSILDCEDDDWDFAMNLNVRSMY 106

Query: 179 FLTKLLLP-LLKNSPVPSRIVNVTSFT 204
            + K +LP +L        I+N++S  
Sbjct: 107 LMIKAVLPKMLARK--DGSIINMSSVA 131

Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241

>gnl|CDD|181349 PRK08278, PRK08278, short chain dehydrogenase; Provisional

 Score = 45.3 bits (108), Expect = 2e-05
 Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 17/141 (12%)

Query: 63  IVTGATSGLGAAAAYALSREGFHVVLVGRSS--H-----LLSETMADITSRNKDARLEAF 115
            +TGA+ G+G A A   +R+G ++V+  +++  H      +     +I +    A     
Sbjct: 10  FITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQAL--PL 67

Query: 116 QVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTN 173
             D+     V     ++ + +   +    I + +NNA    L  +     + +D M   N
Sbjct: 68  VGDVRDEDQV---AAAVAKAV---ERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQIN 121

Query: 174 YIGAFFLTKLLLPLLKNSPVP 194
             G F +++  LP LK S  P
Sbjct: 122 VRGTFLVSQACLPHLKKSENP 142

Length = 273

>gnl|CDD|180343 PRK05993, PRK05993, short chain dehydrogenase; Provisional

 Score = 45.0 bits (107), Expect = 2e-05
 Identities = 38/149 (25%), Positives = 63/149 (42%), Gaps = 22/149 (14%)

Query: 59  RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVD 118
           +   ++TG +SG+GA  A AL  +G+ V    R          D+ +  +   LEAFQ+D
Sbjct: 4   KRSILITGCSSGIGAYCARALQSDGWRVFATCRKEE-------DV-AALEAEGLEAFQLD 55

Query: 119 LSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINN-----AGILATSSRLTPEGYDQMMSTN 173
            +  +S+      + Q L  S     +  L NN      G +     L  E        N
Sbjct: 56  YAEPESI---AALVAQVLELSG--GRLDALFNNGAYGQPGAV---EDLPTEALRAQFEAN 107

Query: 174 YIGAFFLTKLLLPLLKNSPVPSRIVNVTS 202
           + G   LT+ ++P+++      RIV  +S
Sbjct: 108 FFGWHDLTRRVIPVMRKQG-QGRIVQCSS 135

Length = 277

>gnl|CDD|212497 cd11731, Lin1944_like_SDR_c, Lin1944 and related proteins, classical (c) SDRs

 Score = 43.7 bits (104), Expect = 3e-05
 Identities = 20/66 (30%), Positives = 26/66 (39%), Gaps = 19/66 (28%)

Query: 63  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 122
           IV GAT  +G A A  LS  G  V+  GRSS                     +QVD++  
Sbjct: 2   IVIGATGTIGLAVAQLLSAHGHEVITAGRSS-------------------GDYQVDITDE 42

Query: 123 QSVLKF 128
            S+   
Sbjct: 43  ASIKAL 48

Lin1944 protein from Listeria Innocua is a classical SDR, it contains a glycine-rich motif similar to the canonical motif of the SDR NAD(P)-binding site. However, the typical SDR active site residues are absent in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 198

>gnl|CDD|187641 cd08936, CR_SDR_c, Porcine peroxisomal carbonyl reductase like, classical (c) SDR

 Score = 44.5 bits (105), Expect = 4e-05
 Identities = 51/221 (23%), Positives = 92/221 (41%), Gaps = 37/221 (16%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V +VT +T G+G A A  L+++G HVV+  R    +   +A +       + E   V   
Sbjct: 12  VALVTASTDGIGLAIARRLAQDGAHVVVSSRKQQNVDRAVATL-------QGEGLSV-TG 63

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI---LATSSRLTPEGYDQMMSTNYIGA 177
           +   V K +D  +      ++H  + +L++NA +          T E +D+++  N    
Sbjct: 64  TVCHVGKAEDRERLVATAVNLHGGVDILVSNAAVNPFFGNILDSTEEVWDKILDVNVKAT 123

Query: 178 FFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEY 237
             +TK ++P ++     S +V V+S    + F                    P    Y  
Sbjct: 124 ALMTKAVVPEMEKRGGGS-VVIVSSVAAFHPF--------------------PGLGPYNV 162

Query: 238 SKLCLLIFSYELHRNLGLDKS-RHVSVIAADPGVVKTNIMR 277
           SK  LL     L +NL  + + R++ V    PG++KT+   
Sbjct: 163 SKTALL----GLTKNLAPELAPRNIRVNCLAPGLIKTSFSS 199

This subgroup contains porcine peroxisomal carbonyl reductase and similar proteins. The porcine enzyme efficiently reduces retinals. This subgroup also includes human dehydrogenase/reductase (SDR family) member 4 (DHRS4), and human DHRS4L1. DHRS4 is a peroxisomal enzyme with 3beta-hydroxysteroid dehydrogenase activity; it catalyzes the reduction of 3-keto-C19/C21-steroids into 3beta-hydroxysteroids more efficiently than it does the retinal reduction. The human DHRS4 gene cluster contains DHRS4, DHRS4L2 and DHRS4L1. DHRS4L2 and DHRS4L1 are paralogs of DHRS4, DHRS4L2 being the most recent member. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional

 Score = 44.4 bits (105), Expect = 4e-05
 Identities = 41/146 (28%), Positives = 64/146 (43%), Gaps = 20/146 (13%)

Query: 60  PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDL 119
           PV ++TG +SG+G A A A    G+ V    R +  +    A        A   A Q+D+
Sbjct: 2   PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAA--------AGFTAVQLDV 53

Query: 120 SSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQM---MSTNYIG 176
           +   ++ +  + L+        H  + +LINNAG  A    L   G + M     TN   
Sbjct: 54  NDGAALARLAEELEA------EHGGLDVLINNAGYGAMGP-LLDGGVEAMRRQFETNVFA 106

Query: 177 AFFLTKLLLPLLKNSPVPSRIVNVTS 202
              +T+ L PLL+ S     +VN+ S
Sbjct: 107 VVGVTRALFPLLRRS--RGLVVNIGS 130

Length = 274

>gnl|CDD|235713 PRK06139, PRK06139, short chain dehydrogenase; Provisional

 Score = 44.3 bits (105), Expect = 5e-05
 Identities = 34/118 (28%), Positives = 52/118 (44%), Gaps = 10/118 (8%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V ++TGA+SG+G A A A +R G  +VL  R    L    A+   R   A +     D++
Sbjct: 9   VVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAV-AE-ECRALGAEVLVVPTDVT 66

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS-RLTP-EGYDQMMSTNYIG 176
               V         +         I + +NN G+ A      TP E ++Q++ TN IG
Sbjct: 67  DADQVKALATQAASFG------GRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIG 118

Length = 330

>gnl|CDD|181517 PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 43.5 bits (103), Expect = 8e-05
 Identities = 42/163 (25%), Positives = 69/163 (42%), Gaps = 26/163 (15%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
             +VTG + GLGAA A A +REG  VV+    ++  SE  A+  +     R  A Q D++
Sbjct: 7   TVLVTGGSRGLGAAIARAFAREGARVVV----NYHQSEDAAEALADELGDRAIALQADVT 62

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA----------TSSRLTPEGYDQMM 170
             + V     +  +          I  ++NNA  LA           +  +T E + Q +
Sbjct: 63  DREQVQAMFATATEHF-----GKPITTVVNNA--LADFSFDGDARKKADDITWEDFQQQL 115

Query: 171 STNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV 213
             +  GA    +  LP ++      RI+N+ +    N+F   V
Sbjct: 116 EGSVKGALNTIQAALPGMREQGF-GRIINIGT----NLFQNPV 153

Length = 253

>gnl|CDD|187583 cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehydrogenase (SDH), classical (c) SDRs

 Score = 43.2 bits (102), Expect = 8e-05
 Identities = 33/148 (22%), Positives = 63/148 (42%), Gaps = 11/148 (7%)

Query: 58  KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQV 117
              V +V G    LG    + L+  G+ V +   +S   +E +AD  +     +   F  
Sbjct: 1   MNQVAVVIGGGQTLGEFLCHGLAEAGYDVAVADINSE-NAEKVADEINAEYGEKAYGFGA 59

Query: 118 DLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGY---DQMMSTNY 174
           D ++ QSV+     + +      +   + LL+ +AGI A S+++T       D+ +  N 
Sbjct: 60  DATNEQSVIALSKGVDE------IFKRVDLLVYSAGI-AKSAKITDFELGDFDRSLQVNL 112

Query: 175 IGAFFLTKLLLPLLKNSPVPSRIVNVTS 202
           +G F   +    L+    +  RI+ + S
Sbjct: 113 VGYFLCAREFSKLMIRDGIQGRIIQINS 140

Sorbitol 6-phosphate dehydrogenase (SDH, aka glucitol 6-phosphate dehydrogenase) catalyzes the NAD-dependent interconversion of D-fructose 6-phosphate to D-sorbitol 6-phosphate. SDH is a member of the classical SDRs, with the characteristic catalytic tetrad, but without a complete match to the typical NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|235914 PRK07041, PRK07041, short chain dehydrogenase; Provisional

 Score = 43.1 bits (102), Expect = 8e-05
 Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 3/66 (4%)

Query: 63  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 122
           +V G +SG+G A A A + EG  V +  RS   L+     +      A +    +D++  
Sbjct: 1   LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARAL---GGGAPVRTAALDITDE 57

Query: 123 QSVLKF 128
            +V  F
Sbjct: 58  AAVDAF 63

Length = 230

>gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional

 Score = 43.4 bits (103), Expect = 8e-05
 Identities = 36/147 (24%), Positives = 58/147 (39%), Gaps = 17/147 (11%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V +V+G   GLG   A   +R G  VVL  R++  L E  A+I    + A   A   D++
Sbjct: 7   VVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRA--LAVPTDIT 64

Query: 121 SFQSVLKFKDSLQQWLLDSDM--HSSIQLLINNA---GILATSSRLTPEGYDQMMSTNYI 175
                   +D     L+   +     +  L+NNA     +   +      +  ++  N +
Sbjct: 65  D-------EDQCAN-LVALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVL 116

Query: 176 GAFFLTKLLLPLLKNSPVPSRIVNVTS 202
           G   LT+   P L  S     IV + S
Sbjct: 117 GTLRLTQAFTPALAES--GGSIVMINS 141

Length = 258

>gnl|CDD|171531 PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 43.0 bits (101), Expect = 1e-04
 Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 12/144 (8%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V I+TG  +GLG   A  L++ G  +V VG +    ++   +   R    +      DL 
Sbjct: 10  VAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGR----KFHFITADLI 65

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL--TPEGYDQMMSTNYIGAF 178
             Q  +   DS+    ++   H  I +LINNAGI+     L    + +D +++ N    F
Sbjct: 66  Q-QKDI---DSIVSQAVEVMGH--IDILINNAGIIRRQDLLEFGNKDWDDVININQKTVF 119

Query: 179 FLTKLLLPLLKNSPVPSRIVNVTS 202
           FL++ +           +I+N+ S
Sbjct: 120 FLSQAVAKQFVKQGNGGKIINIAS 143

Length = 251

>gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional

 Score = 43.1 bits (102), Expect = 1e-04
 Identities = 35/145 (24%), Positives = 61/145 (42%), Gaps = 22/145 (15%)

Query: 64  VTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSS-- 121
           +TGA+ G G A   A    G  VV   R     + T+AD+  +  D RL    +D++   
Sbjct: 8   ITGASRGFGRAWTEAALERGDRVVATARD----TATLADLAEKYGD-RLLPLALDVTDRA 62

Query: 122 --FQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGA 177
             F +V    +              + +++NNAG         +T       + TN+ GA
Sbjct: 63  AVFAAVETAVEHF----------GRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGA 112

Query: 178 FFLTKLLLPLLKNSPVPSRIVNVTS 202
            ++T+ +LP L+       I+ ++S
Sbjct: 113 LWVTQAVLPYLREQR-SGHIIQISS 136

Length = 275

>gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9

 Score = 42.8 bits (101), Expect = 1e-04
 Identities = 36/148 (24%), Positives = 59/148 (39%), Gaps = 18/148 (12%)

Query: 60  PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDL 119
               +TGA SG+G   A   +R G+ V L       L+   A++ + N  A      +D+
Sbjct: 1   KAIFITGAASGIGRETALLFARNGWFVGLYDIDEDGLAALAAELGAENVVAG----ALDV 56

Query: 120 SSFQSVLKFKDSLQQWLLDSDMHSSIQL--LINNAGILATSSRLTP---EGYDQMMSTNY 174
           +        + +    L D    +  +L  L NNAG+              +D+M+  N 
Sbjct: 57  TD-------RAAWAAALADFAAATGGRLDALFNNAGVG-RGGPFEDVPLAAHDRMVDINV 108

Query: 175 IGAFFLTKLLLPLLKNSPVPSRIVNVTS 202
            G        LP LK +P  +R++N  S
Sbjct: 109 KGVLNGAYAALPYLKATP-GARVINTAS 135

This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227

>gnl|CDD|180413 PRK06128, PRK06128, oxidoreductase; Provisional

 Score = 42.9 bits (101), Expect = 1e-04
 Identities = 40/151 (26%), Positives = 64/151 (42%), Gaps = 28/151 (18%)

Query: 63  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDAR-----LEAFQV 117
           ++TGA SG+G A A A +REG  + L    ++L  E         +DA      ++A   
Sbjct: 59  LITGADSGIGRATAIAFAREGADIAL----NYLPEE--------EQDAAEVVQLIQAEGR 106

Query: 118 DLSSFQSVLKFKDSLQQWLLDSDMHSS---IQLLINNAG---ILATSSRLTPEGYDQMMS 171
              +    LK +   +Q  L          + +L+N AG    +   + +T E +D    
Sbjct: 107 KAVALPGDLKDEAFCRQ--LVERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFK 164

Query: 172 TNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 202
           TN    F+L K  +P L   P  + I+N  S
Sbjct: 165 TNVYAMFWLCKAAIPHL---PPGASIINTGS 192

Length = 300

>gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs

 Score = 42.6 bits (100), Expect = 1e-04
 Identities = 66/255 (25%), Positives = 97/255 (38%), Gaps = 43/255 (16%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDAR-LEAFQVDL 119
           V IVTG  +G+G A A  L++ G  VV+    S       A I      A  LE      
Sbjct: 1   VAIVTGGAAGIGKAIAGTLAKAGASVVIADLKSEGAEAVAAAIQQAGGQAIGLECNVTSE 60

Query: 120 SSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNA---GILATSSRLTPEGYDQMMSTNYIG 176
              ++V+K   S             I +L+NNA   G       +T E ++     N   
Sbjct: 61  QDLEAVVKATVS---------QFGGITILVNNAGGGGPKPFDMPMTEEDFEWAFKLNLFS 111

Query: 177 AFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYE 236
           AF L++L  P ++ +   + I+N++S +      ++  N  I                Y 
Sbjct: 112 AFRLSQLCAPHMQKAGGGA-ILNISSMS------SENKNVRIAA--------------YG 150

Query: 237 YSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV--PSFLSLM-AFTVLKL 293
            SK  +   +  L  +LG    R   V A  PG VKT+ +  V  P     M   T L  
Sbjct: 151 SSKAAVNHMTRNLAFDLGPKGIR---VNAVAPGAVKTDALASVLTPEIERAMLKHTPLGR 207

Query: 294 LGLLQSPEKGINSVL 308
           LG    PE   N+ L
Sbjct: 208 LG---EPEDIANAAL 219

This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs

 Score = 42.4 bits (100), Expect = 1e-04
 Identities = 36/155 (23%), Positives = 62/155 (40%), Gaps = 33/155 (21%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNK-----DARLEAF 115
           V I+TG  SG+G A A   ++ G  VV+            A++   +      D  +EA 
Sbjct: 6   VAIITGGASGIGEATARLFAKHGARVVIADIDDDAGQAVAAELGDPDISFVHCDVTVEA- 64

Query: 116 QVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSR----LTPEGYDQMMS 171
             D+           +     +       + ++ NNAG+L          + E +++++ 
Sbjct: 65  --DVR----------AAVDTAV--ARFGRLDIMFNNAGVLGAPCYSILETSLEEFERVLD 110

Query: 172 TNYIGAFFLTK----LLLPLLKNSPVPSRIVNVTS 202
            N  GAF  TK    +++P  K S     IV+V S
Sbjct: 111 VNVYGAFLGTKHAARVMIPAKKGS-----IVSVAS 140

Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional

 Score = 42.0 bits (99), Expect = 2e-04
 Identities = 56/235 (23%), Positives = 86/235 (36%), Gaps = 66/235 (28%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADIT-SRNKDARLEA----F 115
           V ++TG  SG+G A A  L+ EG  VV+             DI     K A  E      
Sbjct: 9   VAVITGGGSGIGLATARRLAAEGATVVV------------GDIDPEAGKAAADEVGGLFV 56

Query: 116 QVDLSSFQSVLKFKDSLQQWLLDS--DMHSSIQLLINNAG--------ILATSSRLTPEG 165
             D++   +V          L D+  + + S+ +  NNAG        IL T      + 
Sbjct: 57  PTDVTDEDAV--------NALFDTAAETYGSVDIAFNNAGISPPEDDSILNTG----LDA 104

Query: 166 YDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRN-VFNAQVNNETITGKFFL 224
           + ++   N    +   K  LP +      S I+N  SF        +Q++          
Sbjct: 105 WQRVQDVNLTSVYLCCKAALPHMVRQGKGS-IINTASFVAVMGSATSQIS---------- 153

Query: 225 RSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRH-VSVIAADPGVVKTNIMRE 278
                     Y  SK  +L  S    R LG+  +R  + V A  PG V T +++E
Sbjct: 154 ----------YTASKGGVLAMS----RELGVQFARQGIRVNALCPGPVNTPLLQE 194

Length = 255

>gnl|CDD|181324 PRK08251, PRK08251, short chain dehydrogenase; Provisional

 Score = 41.5 bits (98), Expect = 3e-04
 Identities = 30/123 (24%), Positives = 53/123 (43%), Gaps = 10/123 (8%)

Query: 58  KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQV 117
            R   ++TGA+SGLGA  A   + +G  + L  R +  L E  A++ +R    ++    +
Sbjct: 1   TRQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAAL 60

Query: 118 DLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYD---QMMSTNY 174
           D++    V +     +  L        +  +I NAGI    +RL    +        TN+
Sbjct: 61  DVNDHDQVFEVFAEFRDEL------GGLDRVIVNAGI-GKGARLGTGKFWANKATAETNF 113

Query: 175 IGA 177
           + A
Sbjct: 114 VAA 116

Length = 248

>gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional

 Score = 41.3 bits (97), Expect = 4e-04
 Identities = 34/152 (22%), Positives = 57/152 (37%), Gaps = 15/152 (9%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
             +VTGA  G+G A A      G  V+ +   +  L+     +     DAR      DL+
Sbjct: 4   TALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALG----DARFVPVACDLT 59

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGAF 178
              S+     +L     +      + +L+ NAG    +S    TP  +    + N   A+
Sbjct: 60  DAASL---AAALANAAAER---GPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAY 113

Query: 179 FLTKLLL-PLLKNSPVPSRIVNVTSFTHRNVF 209
              + +L  +LK S     +VN+ S       
Sbjct: 114 LCVEAVLEGMLKRS--RGAVVNIGSVNGMAAL 143

Length = 257

>gnl|CDD|181188 PRK07985, PRK07985, oxidoreductase; Provisional

 Score = 41.1 bits (96), Expect = 5e-04
 Identities = 40/150 (26%), Positives = 66/150 (44%), Gaps = 26/150 (17%)

Query: 63  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 122
           +VTG  SG+G AAA A +REG  V +    S+L  E         +DA+     ++    
Sbjct: 53  LVTGGDSGIGRAAAIAYAREGADVAI----SYLPVE--------EEDAQDVKKIIEECGR 100

Query: 123 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS----------RLTPEGYDQMMST 172
           ++VL   D   +    S +H + + L     I+A  +           LT E + +  + 
Sbjct: 101 KAVLLPGDLSDEKFARSLVHEAHKAL-GGLDIMALVAGKQVAIPDIADLTSEQFQKTFAI 159

Query: 173 NYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 202
           N    F+LT+  +PLL   P  + I+  +S
Sbjct: 160 NVFALFWLTQEAIPLL---PKGASIITTSS 186

Length = 294

>gnl|CDD|130890 TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-protein) reductase, putative

 Score = 40.7 bits (95), Expect = 6e-04
 Identities = 54/226 (23%), Positives = 97/226 (42%), Gaps = 38/226 (16%)

Query: 63  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSE-TMADITSRNKDARLEAFQV-DLS 120
           +VTGA+ G+G A A  L+ +GF + +   S    +E  ++ I ++  +ARL  F V D  
Sbjct: 2   LVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRV 61

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAF 178
           + +++L+          D   H +   ++ NAGI   A    L+ E +D ++ TN  G +
Sbjct: 62  ACRTLLE---------ADIAEHGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFY 112

Query: 179 -FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEY 237
             +    +P+++      RI+ + S +       QVN                    Y  
Sbjct: 113 NVIHPCTMPMIRARQ-GGRIITLASVSGVMGNRGQVN--------------------YSA 151

Query: 238 SKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFL 283
           +K  L+  +  L   L     R ++V    PG++ T ++ EV   L
Sbjct: 152 AKAGLIGATKALAVELA---KRKITVNCIAPGLIDTEMLAEVEHDL 194

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|181762 PRK09291, PRK09291, short chain dehydrogenase; Provisional

 Score = 40.8 bits (96), Expect = 6e-04
 Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 14/92 (15%)

Query: 63  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 122
           ++TGA SG G   A  L+R+G +V+   + +  ++   A+   R     L   ++DL+  
Sbjct: 6   LITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARR--GLALRVEKLDLTD- 62

Query: 123 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI 154
                  D  Q    D D      +L+NNAGI
Sbjct: 63  -----AIDRAQAAEWDVD------VLLNNAGI 83

Length = 257

>gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR

 Score = 40.6 bits (95), Expect = 7e-04
 Identities = 34/147 (23%), Positives = 56/147 (38%), Gaps = 16/147 (10%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V IVTG + G+G     A    G  VV   R              +  ++ L        
Sbjct: 11  VVIVTGGSRGIGRGIVRAFVENGAKVVFCARGEA---------AGQALESELNRAGPGSC 61

Query: 121 SFQSVLKFKDSLQQWLLDSDMHS--SIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYI 175
            F      K+   + L+   +     I  L+NNAG      T+   + + +  +++ N I
Sbjct: 62  KFVPCDVTKEEDIKTLISVTVERFGRIDCLVNNAGWHPPHQTTDETSAQEFRDLLNLNLI 121

Query: 176 GAFFLTKLLLPLLKNSPVPSRIVNVTS 202
             F  +K  LP L+ S     I+N++S
Sbjct: 122 SYFLASKYALPHLRKS--QGNIINLSS 146

These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261

>gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional

 Score = 40.4 bits (95), Expect = 7e-04
 Identities = 37/150 (24%), Positives = 63/150 (42%), Gaps = 22/150 (14%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQV-DL 119
           + +VTGA+ G+G A A  L+++G HV++  R           I +    A   A  + ++
Sbjct: 10  IALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEM 69

Query: 120 SSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAG-------ILATSSRLTPEGYDQMMST 172
               ++  F    ++       H  + +L+NNA        IL T        + + +  
Sbjct: 70  EQIDAL--FAHIRER-------HGRLDILVNNAAANPYFGHILDTD----LGAFQKTVDV 116

Query: 173 NYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 202
           N  G FF++     L+K     S IVNV S
Sbjct: 117 NIRGYFFMSVEAGKLMKEQGGGS-IVNVAS 145

Length = 252

>gnl|CDD|180774 PRK06953, PRK06953, short chain dehydrogenase; Provisional

 Score = 39.7 bits (93), Expect = 0.001
 Identities = 30/132 (22%), Positives = 55/132 (41%), Gaps = 20/132 (15%)

Query: 60  PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDL 119
              ++ GA+ G+G         +G+ V+   R +      +A + +       EA  +D+
Sbjct: 2   KTVLIVGASRGIGREFVRQYRADGWRVIATARDA----AALAALQALGA----EALALDV 53

Query: 120 SSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL-ATSSRLTP---EGYDQMMSTNYI 175
           +   SV         W LD +   ++   +  AG+    +  + P   E +D +M TN +
Sbjct: 54  ADPASVAGLA-----WKLDGE---ALDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVL 105

Query: 176 GAFFLTKLLLPL 187
           G   L  +LLPL
Sbjct: 106 GPMQLLPILLPL 117

Length = 222

>gnl|CDD|214833 smart00822, PKS_KR, This enzymatic domain is part of bacterial polyketide synthases

 Score = 39.0 bits (92), Expect = 0.001
 Identities = 33/135 (24%), Positives = 60/135 (44%), Gaps = 18/135 (13%)

Query: 61  VCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSH---LLSETMADITSRNKDARLEAFQ 116
             ++TG   GLG A A  L+  G   +VL+ RS       +  +A++ +    AR+    
Sbjct: 2   TYLITGGLGGLGRALARWLAERGARRLVLLSRSGPDAPGAAALLAELEAA--GARVTVVA 59

Query: 117 VDLSSFQSVLKFKDSLQQWL--LDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMST 172
            D++        +D+L   L  + +     +  +I+ AG+L       LTPE +  +++ 
Sbjct: 60  CDVAD-------RDALAAVLAAIPAVEG-PLTGVIHAAGVLDDGVLASLTPERFAAVLAP 111

Query: 173 NYIGAFFLTKLLLPL 187
              GA+ L +L   L
Sbjct: 112 KAAGAWNLHELTADL 126

It catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 180

>gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional

 Score = 39.5 bits (93), Expect = 0.001
 Identities = 37/148 (25%), Positives = 61/148 (41%), Gaps = 30/148 (20%)

Query: 63  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 122
           +VTG T G+GAA    L   G  VV   RS              +    +E    DL++ 
Sbjct: 13  LVTGGTKGIGAATVARLLEAGARVVTTARS-----------RPDDLPEGVEFVAADLTTA 61

Query: 123 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS------RLTPEGYDQMMSTNYIG 176
           +       ++ + L   D      +L++  G   +S+       LT E +   ++ N + 
Sbjct: 62  EGCAAVARAVLERLGGVD------ILVHVLG--GSSAPAGGFAALTDEEWQDELNLNLLA 113

Query: 177 AFFLTKLLLPLL--KNSPVPSRIVNVTS 202
           A  L + LLP +  + S V   I++VTS
Sbjct: 114 AVRLDRALLPGMIARGSGV---IIHVTS 138

Length = 260

>gnl|CDD|180300 PRK05875, PRK05875, short chain dehydrogenase; Provisional

 Score = 39.8 bits (93), Expect = 0.001
 Identities = 19/73 (26%), Positives = 32/73 (43%)

Query: 63  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 122
           +VTG  SG+G   A  L   G  V++VGR+   L+    +I +      +     D++  
Sbjct: 11  LVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDE 70

Query: 123 QSVLKFKDSLQQW 135
             V +  D+   W
Sbjct: 71  DQVARAVDAATAW 83

Length = 276

>gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs

 Score = 38.5 bits (90), Expect = 0.003
 Identities = 36/142 (25%), Positives = 61/142 (42%), Gaps = 18/142 (12%)

Query: 57  IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQ 116
           +K  V ++TG  SGLG A       EG  V ++ RS    +E +A++ +   DA +   +
Sbjct: 2   LKGEVALITGGGSGLGRALVERFVAEGAKVAVLDRS----AEKVAELRADFGDA-VVGVE 56

Query: 117 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL--TPE-----GYDQM 169
            D+ S       + ++ + +   +    +   I NAGI   S+ L   PE      +D++
Sbjct: 57  GDVRSLAD---NERAVARCV---ERFGKLDCFIGNAGIWDYSTSLVDIPEEKLDEAFDEL 110

Query: 170 MSTNYIGAFFLTKLLLPLLKNS 191
              N  G     K  LP L  +
Sbjct: 111 FHINVKGYILGAKAALPALYAT 132

cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|181126 PRK07806, PRK07806, short chain dehydrogenase; Provisional

 Score = 38.5 bits (90), Expect = 0.003
 Identities = 40/145 (27%), Positives = 58/145 (40%), Gaps = 24/145 (16%)

Query: 63  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 122
           +VTG++ G+GA  A  L+  G HVV+  R     +  +          R  A   DL+  
Sbjct: 10  LVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVA-EIEAAGGRASAVGADLTDE 68

Query: 123 QSVLKFKDSLQQWLLDSDMHS--SIQLLINNAGILATSSRL---TPEGYDQMMSTNYIGA 177
           +SV          L+D+       +  L+ NA     S  +     E Y   M  N    
Sbjct: 69  ESV--------AALMDTAREEFGGLDALVLNA-----SGGMESGMDEDY--AMRLNRDAQ 113

Query: 178 FFLTKLLLPLLKNSPVPSRIVNVTS 202
             L +  LPL+   P  SR+V VTS
Sbjct: 114 RNLARAALPLM---PAGSRVVFVTS 135

Length = 248

>gnl|CDD|236099 PRK07791, PRK07791, short chain dehydrogenase; Provisional

 Score = 38.5 bits (90), Expect = 0.003
 Identities = 38/165 (23%), Positives = 67/165 (40%), Gaps = 38/165 (23%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVL--VGRSSHLLS-------ETMADITSRNKDAR 111
           V IVTGA  G+G A A A + EG  VV+  +G      +         + +I +   +A 
Sbjct: 8   VVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAV 67

Query: 112 LEAFQVDLSSFQSVLKFKDSLQQW-----LLDS--DMHSSIQLLINNAGILATS--SRLT 162
                             D +  W     L+D+  +    + +L+NNAGIL     + ++
Sbjct: 68  ANG---------------DDIADWDGAANLVDAAVETFGGLDVLVNNAGILRDRMIANMS 112

Query: 163 PEGYDQMMSTNYIGAFFLTKLLLPLLKN-----SPVPSRIVNVTS 202
            E +D +++ +  G F   +      +        V +RI+N +S
Sbjct: 113 EEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSS 157

Length = 286

>gnl|CDD|131732 TIGR02685, pter_reduc_Leis, pteridine reductase

 Score = 38.4 bits (89), Expect = 0.003
 Identities = 31/137 (22%), Positives = 55/137 (40%), Gaps = 17/137 (12%)

Query: 60  PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDL 119
           P  +VTGA   +G++ A AL +EG+ VVL    S   + T+A   +  +       Q DL
Sbjct: 2   PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADL 61

Query: 120 SSFQSVLKFKDSLQQWLLDSDMH-SSIQLLINNAGILATSSRLTPEGYD----------- 167
           S+  ++       +  +           +L+NNA     +  L  +  +           
Sbjct: 62  SNSATLF---SRCEAIIDACFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQ 118

Query: 168 --QMMSTNYIGAFFLTK 182
             ++  +N I  +FL K
Sbjct: 119 VAELFGSNAIAPYFLIK 135

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. Length = 267

>gnl|CDD|181605 PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrogenase; Validated

 Score = 38.3 bits (89), Expect = 0.004
 Identities = 31/144 (21%), Positives = 60/144 (41%), Gaps = 12/144 (8%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V +VTG  +GLG   A  L+  G  +V +       +ET+  +T+  +  R  +   DL 
Sbjct: 12  VAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEP--TETIEQVTALGR--RFLSLTADLR 67

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL--TPEGYDQMMSTNYIGAF 178
               +    +              I +L+NNAG++     +  + + +D +M+ N    F
Sbjct: 68  KIDGIPALLERAVAEF------GHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVF 121

Query: 179 FLTKLLLPLLKNSPVPSRIVNVTS 202
           F+++             +I+N+ S
Sbjct: 122 FMSQAAAKHFIAQGNGGKIINIAS 145

Length = 253

>gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs

 Score = 37.9 bits (88), Expect = 0.004
 Identities = 51/216 (23%), Positives = 78/216 (36%), Gaps = 41/216 (18%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V IVTG   G+G          G  VV          E  AD     +      F V   
Sbjct: 3   VAIVTGGGHGIGKQICLDFLEAGDKVVFADID----EERGAD---FAEAEGPNLFFVHGD 55

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATS--SRLTPEGYDQMMSTNYIGAF 178
                L  K  +   L   +    I +L+NNA   +    S L  E +D+++S N  G +
Sbjct: 56  VADETLV-KFVVYAML---EKLGRIDVLVNNAARGSKGILSSLLLEEWDRILSVNLTGPY 111

Query: 179 FLTKLLLP-LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEY 237
            L++     L+KN     RI+N+ S      F ++ ++E                  Y  
Sbjct: 112 ELSRYCRDELIKNK---GRIINIAS---TRAFQSEPDSEA-----------------YAA 148

Query: 238 SKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKT 273
           SK  L+  ++ L  +LG      + V    PG + T
Sbjct: 149 SKGGLVALTHALAMSLG----PDIRVNCISPGWINT 180

This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|235608 PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 37.8 bits (88), Expect = 0.004
 Identities = 31/140 (22%), Positives = 55/140 (39%), Gaps = 12/140 (8%)

Query: 63  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 122
            + G + GLG A AY   +EG  V +  R+ + L      ++   K   +     D+SS 
Sbjct: 9   AIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLS---KYGNIHYVVGDVSST 65

Query: 123 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTK 182
           +S     +   + L      ++I  L+   G     +     G ++M++ +     +   
Sbjct: 66  ESARNVIEKAAKVL------NAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVN 119

Query: 183 LLLPLLKNSPVPSRIVNVTS 202
             L  LK     S IV V+S
Sbjct: 120 ASLRFLKEG---SSIVLVSS 136

Length = 238

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	365
KOG1208	314	consensus Dehydrogenases with different specificit	100.0
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	100.0
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	100.0
COG0300	265	DltE Short-chain dehydrogenases of various substra	100.0
PRK05854	313	short chain dehydrogenase; Provisional	100.0
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	100.0
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	100.0
PRK06197	306	short chain dehydrogenase; Provisional	100.0
PRK08303	305	short chain dehydrogenase; Provisional	100.0
PRK08339	263	short chain dehydrogenase; Provisional	100.0
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PLN00015	308	protochlorophyllide reductase	100.0
PRK06196	315	oxidoreductase; Provisional	100.0
PRK07063	260	short chain dehydrogenase; Provisional	100.0
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08589	272	short chain dehydrogenase; Validated	100.0
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	100.0
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	100.0
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK05867	253	short chain dehydrogenase; Provisional	100.0
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	100.0
PRK07062	265	short chain dehydrogenase; Provisional	100.0
PRK07453	322	protochlorophyllide oxidoreductase; Validated	100.0
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
KOG0725	270	consensus Reductases with broad range of substrate	100.0
PRK07478	254	short chain dehydrogenase; Provisional	100.0
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	100.0
PRK06114	254	short chain dehydrogenase; Provisional	100.0
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08265	261	short chain dehydrogenase; Provisional	100.0
PRK12747	252	short chain dehydrogenase; Provisional	100.0
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	100.0
PRK07791	286	short chain dehydrogenase; Provisional	100.0
PRK08340	259	glucose-1-dehydrogenase; Provisional	100.0
PLN02780	320	ketoreductase/ oxidoreductase	100.0
PRK08277	278	D-mannonate oxidoreductase; Provisional	100.0
PRK08085	254	gluconate 5-dehydrogenase; Provisional	100.0
PRK06398	258	aldose dehydrogenase; Validated	100.0
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	100.0
PRK07035	252	short chain dehydrogenase; Provisional	100.0
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK06172	253	short chain dehydrogenase; Provisional	100.0
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	100.0
PRK07985	294	oxidoreductase; Provisional	100.0
PRK08936	261	glucose-1-dehydrogenase; Provisional	100.0
PRK07831	262	short chain dehydrogenase; Provisional	100.0
PRK06128	300	oxidoreductase; Provisional	100.0
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	100.0
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	100.0
PRK06139	330	short chain dehydrogenase; Provisional	100.0
PRK09242	257	tropinone reductase; Provisional	100.0
PRK07097	265	gluconate 5-dehydrogenase; Provisional	100.0
PRK08643	256	acetoin reductase; Validated	100.0
PRK05872	296	short chain dehydrogenase; Provisional	100.0
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	100.0
PRK07523	255	gluconate 5-dehydrogenase; Provisional	100.0
PRK05876	275	short chain dehydrogenase; Provisional	100.0
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	100.0
PRK07067	257	sorbitol dehydrogenase; Provisional	100.0
PRK06125	259	short chain dehydrogenase; Provisional	100.0
PRK06841	255	short chain dehydrogenase; Provisional	100.0
PRK05599	246	hypothetical protein; Provisional	100.0
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	100.0
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	100.0
PRK07677	252	short chain dehydrogenase; Provisional	100.0
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12743	256	oxidoreductase; Provisional	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PLN02253	280	xanthoxin dehydrogenase	100.0
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	100.0
PRK06940	275	short chain dehydrogenase; Provisional	100.0
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	100.0
PRK05717	255	oxidoreductase; Validated	100.0
PRK07856	252	short chain dehydrogenase; Provisional	100.0
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	100.0
PRK08226	263	short chain dehydrogenase; Provisional	100.0
PRK06124	256	gluconate 5-dehydrogenase; Provisional	100.0
PRK06949	258	short chain dehydrogenase; Provisional	100.0
PRK06523	260	short chain dehydrogenase; Provisional	100.0
PRK08862	227	short chain dehydrogenase; Provisional	100.0
PRK07109	334	short chain dehydrogenase; Provisional	100.0
PRK08278	273	short chain dehydrogenase; Provisional	100.0
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06483	236	dihydromonapterin reductase; Provisional	100.0
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	100.0
PRK12939	250	short chain dehydrogenase; Provisional	100.0
TIGR02415	254	23BDH acetoin reductases. One member of this famil	100.0
PRK08628	258	short chain dehydrogenase; Provisional	100.0
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	100.0
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07774	250	short chain dehydrogenase; Provisional	100.0
PRK07814	263	short chain dehydrogenase; Provisional	100.0
PRK09186	256	flagellin modification protein A; Provisional	100.0
PRK07576	264	short chain dehydrogenase; Provisional	100.0
PRK07890	258	short chain dehydrogenase; Provisional	100.0
PRK06701	290	short chain dehydrogenase; Provisional	100.0
PRK12938	246	acetyacetyl-CoA reductase; Provisional	100.0
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	100.0
PRK07825	273	short chain dehydrogenase; Provisional	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK12935	247	acetoacetyl-CoA reductase; Provisional	100.0
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	100.0
PRK06500	249	short chain dehydrogenase; Provisional	100.0
PRK05855	582	short chain dehydrogenase; Validated	100.0
PRK12937	245	short chain dehydrogenase; Provisional	100.0
PRK06138	252	short chain dehydrogenase; Provisional	100.0
PRK12742	237	oxidoreductase; Provisional	100.0
PRK08263	275	short chain dehydrogenase; Provisional	100.0
PRK06182	273	short chain dehydrogenase; Validated	100.0
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	100.0
PRK05866	293	short chain dehydrogenase; Provisional	100.0
PRK06947	248	glucose-1-dehydrogenase; Provisional	100.0
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	100.0
PRK07832	272	short chain dehydrogenase; Provisional	100.0
PRK12744	257	short chain dehydrogenase; Provisional	100.0
PRK08213	259	gluconate 5-dehydrogenase; Provisional	100.0
PRK05875	276	short chain dehydrogenase; Provisional	100.0
PRK09134	258	short chain dehydrogenase; Provisional	100.0
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	100.0
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	100.0
PRK05650	270	short chain dehydrogenase; Provisional	100.0
PRK07904	253	short chain dehydrogenase; Provisional	100.0
PRK06057	255	short chain dehydrogenase; Provisional	100.0
PRK05993	277	short chain dehydrogenase; Provisional	100.0
PRK07069	251	short chain dehydrogenase; Validated	100.0
PRK06123	248	short chain dehydrogenase; Provisional	100.0
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	100.0
PRK08703	239	short chain dehydrogenase; Provisional	100.0
PRK06180	277	short chain dehydrogenase; Provisional	100.0
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	100.0
KOG1611	249	consensus Predicted short chain-type dehydrogenase	100.0
PRK06198	260	short chain dehydrogenase; Provisional	100.0
PRK07024	257	short chain dehydrogenase; Provisional	100.0
PRK06914	280	short chain dehydrogenase; Provisional	100.0
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK06924	251	short chain dehydrogenase; Provisional	100.0
PRK06194	287	hypothetical protein; Provisional	100.0
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	100.0
PRK12824	245	acetoacetyl-CoA reductase; Provisional	100.0
PRK08251	248	short chain dehydrogenase; Provisional	100.0
PRK12746	254	short chain dehydrogenase; Provisional	100.0
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	100.0
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06179	270	short chain dehydrogenase; Provisional	100.0
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	100.0
PRK07775	274	short chain dehydrogenase; Provisional	100.0
PRK05884	223	short chain dehydrogenase; Provisional	100.0
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	100.0
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07454	241	short chain dehydrogenase; Provisional	100.0
PRK09135	249	pteridine reductase; Provisional	100.0
PRK05693	274	short chain dehydrogenase; Provisional	100.0
PRK12827	249	short chain dehydrogenase; Provisional	100.0
PRK10538	248	malonic semialdehyde reductase; Provisional	100.0
PRK08267	260	short chain dehydrogenase; Provisional	100.0
PRK06482	276	short chain dehydrogenase; Provisional	100.0
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	100.0
PRK07060	245	short chain dehydrogenase; Provisional	100.0
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	100.0
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK09072	263	short chain dehydrogenase; Provisional	100.0
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	100.0
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	100.0
PRK07074	257	short chain dehydrogenase; Provisional	100.0
PRK07577	234	short chain dehydrogenase; Provisional	100.0
PRK07806	248	short chain dehydrogenase; Provisional	100.0
PRK07102	243	short chain dehydrogenase; Provisional	100.0
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK09009	235	C factor cell-cell signaling protein; Provisional	100.0
PRK07041	230	short chain dehydrogenase; Provisional	100.0
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12829	264	short chain dehydrogenase; Provisional	100.0
PRK06181	263	short chain dehydrogenase; Provisional	100.0
PRK07023	243	short chain dehydrogenase; Provisional	100.0
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK08324	681	short chain dehydrogenase; Validated	100.0
COG1028	251	FabG Dehydrogenases with different specificities (	100.0
PRK07201	657	short chain dehydrogenase; Provisional	100.0
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.98
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.98
PRK06101	240	short chain dehydrogenase; Provisional	99.98
PRK08177	225	short chain dehydrogenase; Provisional	99.98
PRK12828	239	short chain dehydrogenase; Provisional	99.97
PRK07326	237	short chain dehydrogenase; Provisional	99.97
PRK07578	199	short chain dehydrogenase; Provisional	99.97
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.97
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.97
PRK09291	257	short chain dehydrogenase; Provisional	99.97
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK08264	238	short chain dehydrogenase; Validated	99.97
PRK12367	245	short chain dehydrogenase; Provisional	99.97
PRK08017	256	oxidoreductase; Provisional	99.96
PRK06953	222	short chain dehydrogenase; Provisional	99.96
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	99.96
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.96
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.95
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.95
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.95
PRK08219	227	short chain dehydrogenase; Provisional	99.95
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.92
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.9
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.9
PLN03209	576	translocon at the inner envelope of chloroplast su	99.9
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.89
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.89
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.87
PLN02653	340	GDP-mannose 4,6-dehydratase	99.87
PLN02583	297	cinnamoyl-CoA reductase	99.86
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.85
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.84
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.84
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.84
PLN02650	351	dihydroflavonol-4-reductase	99.83
PRK06720	169	hypothetical protein; Provisional	99.83
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.83
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.83
PLN02214	342	cinnamoyl-CoA reductase	99.82
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.82
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.81
PLN00198	338	anthocyanidin reductase; Provisional	99.81
PLN02240	352	UDP-glucose 4-epimerase	99.81
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.81
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.8
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.78
PLN02572	442	UDP-sulfoquinovose synthase	99.78
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.77
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.77
PLN02686	367	cinnamoyl-CoA reductase	99.77
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.77
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.75
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.75
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.75
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.75
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.74
PLN02427	386	UDP-apiose/xylose synthase	99.73
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.67
PLN02260	668	probable rhamnose biosynthetic enzyme	99.66
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.66
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.65
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.65
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.64
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.62
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.61
PLN02206	442	UDP-glucuronate decarboxylase	99.6
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.6
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.59
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.59
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.57
PLN02996	491	fatty acyl-CoA reductase	99.55
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.55
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.55
PRK07201	657	short chain dehydrogenase; Provisional	99.54
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.51
CHL00194	317	ycf39 Ycf39; Provisional	99.51
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.5
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.48
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	99.44
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.44
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.43
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.43
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.42
PLN02778	298	3,5-epimerase/4-reductase	99.39
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.38
PRK05865	854	hypothetical protein; Provisional	99.33
PLN02503	605	fatty acyl-CoA reductase 2	99.3
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.29
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	99.25
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.24
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.21
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	99.2
PLN02260	668	probable rhamnose biosynthetic enzyme	99.19
PLN00016	378	RNA-binding protein; Provisional	99.16
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	99.14
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.09
PRK08309	177	short chain dehydrogenase; Provisional	99.06
PRK12320	699	hypothetical protein; Provisional	99.02
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	98.93
COG4982	866	3-oxoacyl-[acyl-carrier protein]	98.87
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.84
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.77
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.73
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	98.64
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.61
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.61
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	98.6
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	98.53
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.52
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	98.44
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	98.41
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	98.4
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	98.33
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.22
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	98.22
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.21
KOG2774	366	consensus NAD dependent epimerase [General functio	98.1
KOG2733	423	consensus Uncharacterized membrane protein [Functi	98.02
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	98.02
COG2910	211	Putative NADH-flavin reductase [General function p	98.0
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.0
PRK09620	229	hypothetical protein; Provisional	98.0
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.98
PLN00106	323	malate dehydrogenase	97.98
PRK14982	340	acyl-ACP reductase; Provisional	97.92
PTZ00325	321	malate dehydrogenase; Provisional	97.86
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	97.83
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	97.81
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	97.69
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.68
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	97.65
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	97.62
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	97.59
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	97.57
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.54
PRK15116	268	sulfur acceptor protein CsdL; Provisional	97.53
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	97.52
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.52
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	97.5
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.5
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.48
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	97.44
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.37
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.35
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	97.34
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	97.33
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	97.32
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.32
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.28
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	97.26
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	97.24
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.24
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	97.23
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	97.23
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	97.23
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	97.22
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	97.22
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	97.2
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	97.2
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	97.19
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	97.18
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	97.16
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	97.14
PRK05086	312	malate dehydrogenase; Provisional	97.13
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	97.1
COG3268	382	Uncharacterized conserved protein [Function unknow	97.1
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	97.08
PRK06849	389	hypothetical protein; Provisional	97.07
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	97.05
COG0569	225	TrkA K+ transport systems, NAD-binding component [	97.04
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	97.04
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	97.04
PRK14968	188	putative methyltransferase; Provisional	97.02
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	97.0
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	96.99
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	96.97
PRK13940	414	glutamyl-tRNA reductase; Provisional	96.93
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	96.86
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	96.84
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	96.84
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	96.83
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	96.82
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	96.81
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	96.79
COG2130	340	Putative NADP-dependent oxidoreductases [General f	96.78
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	96.76
PTZ00117	319	malate dehydrogenase; Provisional	96.76
PRK08223	287	hypothetical protein; Validated	96.76
PRK08328	231	hypothetical protein; Provisional	96.76
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	96.75
PLN02602	350	lactate dehydrogenase	96.74
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	96.72
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	96.72
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	96.68
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	96.68
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	96.68
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	96.67
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	96.66
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	96.66
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	96.65
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	96.63
PTZ00082	321	L-lactate dehydrogenase; Provisional	96.62
PRK08306	296	dipicolinate synthase subunit A; Reviewed	96.6
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	96.58
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	96.58
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.53
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	96.53
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	96.5
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	96.49
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	96.47
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	96.43
PLN02740	381	Alcohol dehydrogenase-like	96.43
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	96.41
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	96.41
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	96.41
PLN00112	444	malate dehydrogenase (NADP); Provisional	96.38
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	96.37
PRK04148	134	hypothetical protein; Provisional	96.36
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	96.32
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	96.32
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.32
PTZ00354	334	alcohol dehydrogenase; Provisional	96.3
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	96.29
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	96.29
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	96.29
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	96.28
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	96.28
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	96.26
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	96.26
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.24
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	96.22
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	96.22
PRK06223	307	malate dehydrogenase; Reviewed	96.18
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	96.16
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	96.12
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	96.12
TIGR01381	664	E1_like_apg7 E1-like protein-activating enzyme Gsa	96.11
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	96.11
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	96.1
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.09
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	96.09
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	96.09
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	96.08
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	96.08
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	96.05
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	96.05
PRK09496	453	trkA potassium transporter peripheral membrane com	96.04
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	96.04
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	96.03
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	96.02
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	96.01
PLN02586	360	probable cinnamyl alcohol dehydrogenase	96.0
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	95.95
PRK07411	390	hypothetical protein; Validated	95.93
cd01488	291	Uba3_RUB Ubiquitin activating enzyme (E1) subunit	95.92
PRK14851	679	hypothetical protein; Provisional	95.9
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	95.89
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	95.89
COG2263	198	Predicted RNA methylase [Translation, ribosomal st	95.88
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	95.86
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	95.85
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	95.85
PLN00203	519	glutamyl-tRNA reductase	95.83
PRK09496	453	trkA potassium transporter peripheral membrane com	95.81
cd01486	307	Apg7 Apg7 is an E1-like protein, that activates tw	95.8
cd01339	300	LDH-like_MDH L-lactate dehydrogenase-like malate d	95.8
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	95.77
PLN02178	375	cinnamyl-alcohol dehydrogenase	95.74
PRK07877	722	hypothetical protein; Provisional	95.73
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	95.72
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.72
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	95.69
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	95.68
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	95.67
COG4123	248	Predicted O-methyltransferase [General function pr	95.67
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	95.67
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	95.64
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	95.64
cd01491	286	Ube1_repeat1 Ubiquitin activating enzyme (E1), rep	95.58
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	95.57
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.56
PRK05442	326	malate dehydrogenase; Provisional	95.56
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	95.51
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	95.42
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	95.37
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	95.37
PRK14967	223	putative methyltransferase; Provisional	95.36
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	95.36
PRK14852	989	hypothetical protein; Provisional	95.34
PF13659	117	Methyltransf_26: Methyltransferase domain; PDB: 3G	95.33
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	95.32
PRK10669	558	putative cation:proton antiport protein; Provision	95.31
KOG2013	603	consensus SMT3/SUMO-activating complex, catalytic	95.28
TIGR02823	323	oxido_YhdH putative quinone oxidoreductase, YhdH/Y	95.25
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	95.24
cd05289	309	MDR_like_2 alcohol dehydrogenase and quinone reduc	95.24
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	95.18
PRK12480	330	D-lactate dehydrogenase; Provisional	95.11
COG3007	398	Uncharacterized paraquat-inducible protein B [Func	95.1
TIGR00537	179	hemK_rel_arch HemK-related putative methylase. The	95.01
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	95.0
PF12076	164	Wax2_C: WAX2 C-terminal domain; InterPro: IPR02194	94.99
PLN02827	378	Alcohol dehydrogenase-like	94.97
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.96
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	94.94
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	94.92
COG0111	324	SerA Phosphoglycerate dehydrogenase and related de	94.92
TIGR02817	336	adh_fam_1 zinc-binding alcohol dehydrogenase famil	94.88

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1e-45  Score=337.67  Aligned_cols=280  Identities=37%  Similarity=0.549  Sum_probs=235.6

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHH
Q 017812           54 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  133 (365)
Q Consensus        54 ~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~  133 (365)
                      ..++.+++++||||++|||+++|++||++|++|++.+||.++.+++++++....+..++.+++||++|.++|++++++++
T Consensus        30 ~~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~  109 (314)
T KOG1208|consen   30 GIDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFK  109 (314)
T ss_pred             cccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999999999999999999987778899999999999999999999999


Q ss_pred             HHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          134 QWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       134 ~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                      +      ..+++|+||||||++.+....+.|++|.+|+||++|+|++++.++|.|+.+. ++|||+|||..+    ....
T Consensus       110 ~------~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~-~~RIV~vsS~~~----~~~~  178 (314)
T KOG1208|consen  110 K------KEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSA-PSRIVNVSSILG----GGKI  178 (314)
T ss_pred             h------cCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCC-CCCEEEEcCccc----cCcc
Confidence            8      6799999999999998888889999999999999999999999999999887 599999999998    2223


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCC-ccccchhHHHHHHHHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTN-IMREVPSFLSLMAFTVLK  292 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~-~~~~~~~~~~~~~~~~~~  292 (365)
                      +.+++.+...   ..+....+|+.||.++..+++.|++++.   . ||.+++++||.|.|+ +.+ ..............
T Consensus       179 ~~~~l~~~~~---~~~~~~~~Y~~SKla~~l~~~eL~k~l~---~-~V~~~~~hPG~v~t~~l~r-~~~~~~~l~~~l~~  250 (314)
T KOG1208|consen  179 DLKDLSGEKA---KLYSSDAAYALSKLANVLLANELAKRLK---K-GVTTYSVHPGVVKTTGLSR-VNLLLRLLAKKLSW  250 (314)
T ss_pred             chhhccchhc---cCccchhHHHHhHHHHHHHHHHHHHHhh---c-CceEEEECCCcccccceec-chHHHHHHHHHHHH
Confidence            3333333221   1145556899999999999999999996   4 999999999999999 555 43333333332222


Q ss_pred             HhcCCCCHHHHHHHHHHHhcCCC--CCcccEEeCCCCccccCCcccCCHHHHHHHHHHHHHhhhcc
Q 017812          293 LLGLLQSPEKGINSVLDAALAPP--ETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFINS  356 (365)
Q Consensus       293 ~~~~~~~p~e~A~~i~~~~l~~~--~~~G~~~~~~~g~~~~~~~~~~d~~~~~~lw~~~~~~~~~~  356 (365)
                      +  .+.+++++|++.+++++.++  ..+|.|+.  ++....++..+.|++.++++|+.++++.+..
T Consensus       251 ~--~~ks~~~ga~t~~~~a~~p~~~~~sg~y~~--d~~~~~~~~~a~d~~~~~~lw~~s~~l~~~~  312 (314)
T KOG1208|consen  251 P--LTKSPEQGAATTCYAALSPELEGVSGKYFE--DCAIAEPSEEALDEELAEKLWKFSEELIDEQ  312 (314)
T ss_pred             H--hccCHHHHhhheehhccCccccCccccccc--cccccccccccCCHHHHHHHHHHHHHHhhhc
Confidence            2  23699999999999999994  67888865  4445555888999999999999999998754

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=100.00  E-value=1.2e-45  Score=316.03  Aligned_cols=228  Identities=28%  Similarity=0.362  Sum_probs=201.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      .+++|+++|||||||||.++|++|++.|++|++++|+.++++++.+++.+    ..+.++.+|++|.+++.++++.+.+ 
T Consensus         3 ~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~----~~~~~~~~DVtD~~~~~~~i~~~~~-   77 (246)
T COG4221           3 TLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA----GAALALALDVTDRAAVEAAIEALPE-   77 (246)
T ss_pred             CCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc----CceEEEeeccCCHHHHHHHHHHHHH-
Confidence            46789999999999999999999999999999999999999999999854    5789999999999999999999988 


Q ss_pred             HhccCCCCCeeEEEecCCcc--cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                           .+++||+||||||++  .+..+.+.++|++++++|+.|.++.+++++|.|.+++ .|+||++||++|.       
T Consensus        78 -----~~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~-~G~IiN~~SiAG~-------  144 (246)
T COG4221          78 -----EFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERK-SGHIINLGSIAGR-------  144 (246)
T ss_pred             -----hhCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcC-CceEEEecccccc-------
Confidence                 779999999999987  4556789999999999999999999999999999997 7899999999999       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  293 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  293 (365)
                                   .++|+.+.|++||+++..|++.|++|+.   .++|||.+|+||.|.|..+...+.............
T Consensus       145 -------------~~y~~~~vY~ATK~aV~~fs~~LR~e~~---g~~IRVt~I~PG~v~~~~~s~v~~~g~~~~~~~~y~  208 (246)
T COG4221         145 -------------YPYPGGAVYGATKAAVRAFSLGLRQELA---GTGIRVTVISPGLVETTEFSTVRFEGDDERADKVYK  208 (246)
T ss_pred             -------------ccCCCCccchhhHHHHHHHHHHHHHHhc---CCCeeEEEecCceecceecccccCCchhhhHHHHhc
Confidence                         9999999999999999999999999998   899999999999998887766544322222222222


Q ss_pred             hcCCCCHHHHHHHHHHHhcCCCCC
Q 017812          294 LGLLQSPEKGINSVLDAALAPPET  317 (365)
Q Consensus       294 ~~~~~~p~e~A~~i~~~~l~~~~~  317 (365)
                      -..+.+|+++|+++.|+...|...
T Consensus       209 ~~~~l~p~dIA~~V~~~~~~P~~v  232 (246)
T COG4221         209 GGTALTPEDIAEAVLFAATQPQHV  232 (246)
T ss_pred             cCCCCCHHHHHHHHHHHHhCCCcc
Confidence            334679999999999988887654

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.8e-44  Score=316.74  Aligned_cols=224  Identities=22%  Similarity=0.316  Sum_probs=202.4

Q ss_pred             CCCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHH
Q 017812           53 PITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  132 (365)
Q Consensus        53 ~~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~  132 (365)
                      +.++++|++||||||++|||+++|.+||++|+++++++.|.+..++..+++++.  + +++.+.||+||.+++.+..+++
T Consensus        32 ~~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~--g-~~~~y~cdis~~eei~~~a~~V  108 (300)
T KOG1201|consen   32 PLKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKI--G-EAKAYTCDISDREEIYRLAKKV  108 (300)
T ss_pred             chhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhc--C-ceeEEEecCCCHHHHHHHHHHH
Confidence            345789999999999999999999999999999999999999999999999876  2 8999999999999999999999


Q ss_pred             HHHHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc
Q 017812          133 QQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN  210 (365)
Q Consensus       133 ~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~  210 (365)
                      ++      +.|.||+||||||++.  +..+++.++++++++||+.|+|+++++|+|.|.+++ .|+||+|+|.+|.    
T Consensus       109 k~------e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~-~GHIV~IaS~aG~----  177 (300)
T KOG1201|consen  109 KK------EVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENN-NGHIVTIASVAGL----  177 (300)
T ss_pred             HH------hcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcC-CceEEEehhhhcc----
Confidence            99      7799999999999984  456889999999999999999999999999999987 8999999999999    


Q ss_pred             ccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHH
Q 017812          211 AQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTV  290 (365)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~  290 (365)
                                      .+.++...|++||+|+.+|+++|+.|+...+..||+.+.|+|++++|+|.....+..       
T Consensus       178 ----------------~g~~gl~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~~~~~~-------  234 (300)
T KOG1201|consen  178 ----------------FGPAGLADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGMFDGATPFP-------  234 (300)
T ss_pred             ----------------cCCccchhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccccCCCCCCc-------
Confidence                            899999999999999999999999999877778999999999999999998622211       


Q ss_pred             HHHhcCCCCHHHHHHHHHHHhcCCC
Q 017812          291 LKLLGLLQSPEKGINSVLDAALAPP  315 (365)
Q Consensus       291 ~~~~~~~~~p~e~A~~i~~~~l~~~  315 (365)
                        .+.-+.+|+++|+.++++.+...
T Consensus       235 --~l~P~L~p~~va~~Iv~ai~~n~  257 (300)
T KOG1201|consen  235 --TLAPLLEPEYVAKRIVEAILTNQ  257 (300)
T ss_pred             --cccCCCCHHHHHHHHHHHHHcCC
Confidence              11134599999999999887754

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=100.00  E-value=7.9e-44  Score=313.83  Aligned_cols=222  Identities=27%  Similarity=0.385  Sum_probs=198.2

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      +++++++|||||+|||+++|++||++|++|++++|++++++++.+++...+ +.++.++++|+++++++.++.+++++  
T Consensus         4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~-~v~v~vi~~DLs~~~~~~~l~~~l~~--   80 (265)
T COG0300           4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKT-GVEVEVIPADLSDPEALERLEDELKE--   80 (265)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhh-CceEEEEECcCCChhHHHHHHHHHHh--
Confidence            578999999999999999999999999999999999999999999999887 77999999999999999999999987  


Q ss_pred             hccCCCCCeeEEEecCCcc--cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017812          137 LDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  214 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~  214 (365)
                          ..+.||+||||||..  +++.+.+.++.++++++|+.+...++++++|.|.+++ .|+||+|+|.+++        
T Consensus        81 ----~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~-~G~IiNI~S~ag~--------  147 (265)
T COG0300          81 ----RGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERG-AGHIINIGSAAGL--------  147 (265)
T ss_pred             ----cCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEechhhc--------
Confidence                567899999999986  5567889999999999999999999999999999987 7999999999999        


Q ss_pred             CccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHh
Q 017812          215 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLL  294 (365)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  294 (365)
                                  .|.|.++.|++||+++.+|+++|+.|+.   ++||+|.+++||+|.|++....+... .    ...+.
T Consensus       148 ------------~p~p~~avY~ATKa~v~~fSeaL~~EL~---~~gV~V~~v~PG~~~T~f~~~~~~~~-~----~~~~~  207 (265)
T COG0300         148 ------------IPTPYMAVYSATKAFVLSFSEALREELK---GTGVKVTAVCPGPTRTEFFDAKGSDV-Y----LLSPG  207 (265)
T ss_pred             ------------CCCcchHHHHHHHHHHHHHHHHHHHHhc---CCCeEEEEEecCcccccccccccccc-c----cccch
Confidence                        8999999999999999999999999998   89999999999999999996211111 0    00122


Q ss_pred             cCCCCHHHHHHHHHHHhcCC
Q 017812          295 GLLQSPEKGINSVLDAALAP  314 (365)
Q Consensus       295 ~~~~~p~e~A~~i~~~~l~~  314 (365)
                      ..+.+|+++|+..++.+...
T Consensus       208 ~~~~~~~~va~~~~~~l~~~  227 (265)
T COG0300         208 ELVLSPEDVAEAALKALEKG  227 (265)
T ss_pred             hhccCHHHHHHHHHHHHhcC
Confidence            24569999999999766543

>PRK05854 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.8e-43  Score=324.40  Aligned_cols=285  Identities=29%  Similarity=0.413  Sum_probs=225.6

Q ss_pred             CCCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHH
Q 017812           53 PITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  132 (365)
Q Consensus        53 ~~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~  132 (365)
                      .+.+++||+++||||++|||+++|++|+++|++|++++|+.++++++.+++.+..++.++.++++|++|.++++++++++
T Consensus         8 ~~~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~   87 (313)
T PRK05854          8 TVPDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQL   87 (313)
T ss_pred             cCcccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHH
Confidence            34568899999999999999999999999999999999999999999999987766678999999999999999999999


Q ss_pred             HHHHhccCCCCCeeEEEecCCcccC-CCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017812          133 QQWLLDSDMHSSIQLLINNAGILAT-SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  211 (365)
Q Consensus       133 ~~~~~~~~~~~~id~lv~nAG~~~~-~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~  211 (365)
                      .+      .++++|+||||||+..+ ..+.+.++++.++++|++|++++++.++|.|++.  .+|||++||.++....  
T Consensus        88 ~~------~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~--~~riv~vsS~~~~~~~--  157 (313)
T PRK05854         88 RA------EGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG--RARVTSQSSIAARRGA--  157 (313)
T ss_pred             HH------hCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC--CCCeEEEechhhcCCC--
Confidence            87      67899999999998754 3356889999999999999999999999999865  4899999999876321  


Q ss_pred             cCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH----HHHH-
Q 017812          212 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF----LSLM-  286 (365)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~----~~~~-  286 (365)
                       .+.+++.     ...++++...|+.||+|+++|+++|++++.. ...||+|++++||+|+|++.+..+..    .... 
T Consensus       158 -~~~~~~~-----~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~-~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~  230 (313)
T PRK05854        158 -INWDDLN-----WERSYAGMRAYSQSKIAVGLFALELDRRSRA-AGWGITSNLAHPGVAPTNLLAARPEVGRDKDTLMV  230 (313)
T ss_pred             -cCccccc-----ccccCcchhhhHHHHHHHHHHHHHHHHHhhc-CCCCeEEEEEecceeccCccccccccccchhHHHH
Confidence             1112111     1245677889999999999999999987542 15789999999999999987543211    0011 


Q ss_pred             HH-HHHHHhc-CCCCHHHHHHHHHHHhcCCCCCcccEEeCCC-----Cc--cccCCcccCCHHHHHHHHHHHHHhhh
Q 017812          287 AF-TVLKLLG-LLQSPEKGINSVLDAALAPPETSGVYFFGGK-----GR--TVNSSALSFNSKLAGELWTTSCNLFI  354 (365)
Q Consensus       287 ~~-~~~~~~~-~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~-----g~--~~~~~~~~~d~~~~~~lw~~~~~~~~  354 (365)
                      .. ......+ .+.+++++|...+++++.++..+|.||..++     |.  ....+....|++.+++||+.++++++
T Consensus       231 ~~~~~~~~~~~~~~~~~~ga~~~l~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~lw~~s~~~~~  307 (313)
T PRK05854        231 RLIRSLSARGFLVGTVESAILPALYAATSPDAEGGAFYGPRGPGELGGGPVEQALYPPLRRNAEAARLWEVSEQLTG  307 (313)
T ss_pred             HHHHHHhhcccccCCHHHHHHHhhheeeCCCCCCCcEECCCcccccCCCcccCCCCcccCCHHHHHHHHHHHHHHHC
Confidence            01 1111111 2569999999999988888777799986542     11  22334446899999999999999986

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=9.4e-44  Score=315.60  Aligned_cols=194  Identities=29%  Similarity=0.414  Sum_probs=177.7

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHH
Q 017812           54 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  133 (365)
Q Consensus        54 ~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~  133 (365)
                      +..+.||+|+|||||||||+++|++|+++|++++++.|..++++.+.+++++..+..++++++||++|.++++++++.+.
T Consensus         7 ~e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~   86 (282)
T KOG1205|consen    7 MERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAI   86 (282)
T ss_pred             HHHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999999999999999999988765579999999999999999999999


Q ss_pred             HHHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017812          134 QWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  211 (365)
Q Consensus       134 ~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~  211 (365)
                      +      .+|++|+||||||+..  ...+.+.+++..+|++|++|+++++++++|+|++++ .|+||++||++|+     
T Consensus        87 ~------~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~-~GhIVvisSiaG~-----  154 (282)
T KOG1205|consen   87 R------HFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRN-DGHIVVISSIAGK-----  154 (282)
T ss_pred             H------hcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcC-CCeEEEEeccccc-----
Confidence            8      6799999999999975  234567889999999999999999999999999987 7999999999999     


Q ss_pred             cCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCC--eEEEEecCCcccCCcccc
Q 017812          212 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRH--VSVIAADPGVVKTNIMRE  278 (365)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~g--i~v~~v~PG~v~T~~~~~  278 (365)
                                     .+.|..+.|++||+|+.+|+++|+.|+.   +.+  |++ .|+||+|+|++...
T Consensus       155 ---------------~~~P~~~~Y~ASK~Al~~f~etLR~El~---~~~~~i~i-~V~PG~V~Te~~~~  204 (282)
T KOG1205|consen  155 ---------------MPLPFRSIYSASKHALEGFFETLRQELI---PLGTIIII-LVSPGPIETEFTGK  204 (282)
T ss_pred             ---------------cCCCcccccchHHHHHHHHHHHHHHHhh---ccCceEEE-EEecCceeecccch
Confidence                           8899999999999999999999999998   555  556 99999999997653

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=100.00  E-value=7.2e-44  Score=290.86  Aligned_cols=236  Identities=24%  Similarity=0.308  Sum_probs=206.5

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      ++.|+++||||++|||++++..|+++|++|++.+++.+.++++...+...   .....+.||+++.++++..+++..+  
T Consensus        12 ~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~---~~h~aF~~DVS~a~~v~~~l~e~~k--   86 (256)
T KOG1200|consen   12 LMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGY---GDHSAFSCDVSKAHDVQNTLEEMEK--   86 (256)
T ss_pred             HhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCC---CccceeeeccCcHHHHHHHHHHHHH--
Confidence            56799999999999999999999999999999999999888888887442   3667899999999999999999988  


Q ss_pred             hccCCCCCeeEEEecCCcccCC--CCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCC-CCCeEEEEcCCcccccccccC
Q 017812          137 LDSDMHSSIQLLINNAGILATS--SRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP-VPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~~~--~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~-~~g~iV~vsS~~~~~~~~~~~  213 (365)
                          ..+++++||||||+..+.  ..+..++|++.+.+|+.|.|+.+|++.+.|...+ ++++||+|||+.+.       
T Consensus        87 ----~~g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGk-------  155 (256)
T KOG1200|consen   87 ----SLGTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGK-------  155 (256)
T ss_pred             ----hcCCCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcc-------
Confidence                668999999999998553  4678999999999999999999999999855443 35599999999998       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  293 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  293 (365)
                                   .+..++..|++||.++++|+++.++|++   .++||||+|.|||+.|||+...|+... .......|
T Consensus       156 -------------iGN~GQtnYAAsK~GvIgftktaArEla---~knIrvN~VlPGFI~tpMT~~mp~~v~-~ki~~~iP  218 (256)
T KOG1200|consen  156 -------------IGNFGQTNYAASKGGVIGFTKTAARELA---RKNIRVNVVLPGFIATPMTEAMPPKVL-DKILGMIP  218 (256)
T ss_pred             -------------cccccchhhhhhcCceeeeeHHHHHHHh---hcCceEeEeccccccChhhhhcCHHHH-HHHHccCC
Confidence                         8888999999999999999999999999   899999999999999999999877542 33445578


Q ss_pred             hcCCCCHHHHHHHHHHHhcCCCC---CcccEEeCCCC
Q 017812          294 LGLLQSPEKGINSVLDAALAPPE---TSGVYFFGGKG  327 (365)
Q Consensus       294 ~~~~~~p~e~A~~i~~~~l~~~~---~~G~~~~~~~g  327 (365)
                      ++|+..+||+|+.++  ||.++.   .+|+-+.+++|
T Consensus       219 mgr~G~~EevA~~V~--fLAS~~ssYiTG~t~evtGG  253 (256)
T KOG1200|consen  219 MGRLGEAEEVANLVL--FLASDASSYITGTTLEVTGG  253 (256)
T ss_pred             ccccCCHHHHHHHHH--HHhccccccccceeEEEecc
Confidence            999999999999999  666774   46777776665

>PRK06197 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-41  Score=314.74  Aligned_cols=284  Identities=37%  Similarity=0.473  Sum_probs=227.1

Q ss_pred             CCCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHH
Q 017812           53 PITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  132 (365)
Q Consensus        53 ~~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~  132 (365)
                      .+.++++|+++||||++|||+++|++|+++|++|++++|+.++++++.+++.+..++.++.++++|++|.++++++++++
T Consensus        10 ~~~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~   89 (306)
T PRK06197         10 DIPDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADAL   89 (306)
T ss_pred             ccccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHH
Confidence            34568899999999999999999999999999999999999988888888876655567899999999999999999999


Q ss_pred             HHHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017812          133 QQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       133 ~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~  212 (365)
                      .+      .++++|+||||||+..+....+.++++.++++|+.|++.+++.++|.|++.+ .++||++||.++.....  
T Consensus        90 ~~------~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~-~~~iV~vSS~~~~~~~~--  160 (306)
T PRK06197         90 RA------AYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVP-GSRVVTVSSGGHRIRAA--  160 (306)
T ss_pred             Hh------hCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCC-CCEEEEECCHHHhccCC--
Confidence            87      6688999999999876655677889999999999999999999999998765 58999999987653111  


Q ss_pred             CCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEE--ecCCcccCCccccchhHHHHHHHHH
Q 017812          213 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIA--ADPGVVKTNIMREVPSFLSLMAFTV  290 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~--v~PG~v~T~~~~~~~~~~~~~~~~~  290 (365)
                      .+.++..     ...++++..+|++||+|+++|++++++++.   +.|+++++  ++||+|+|++.++.+........ .
T Consensus       161 ~~~~~~~-----~~~~~~~~~~Y~~SK~a~~~~~~~la~~l~---~~~i~v~~v~~~PG~v~T~~~~~~~~~~~~~~~-~  231 (306)
T PRK06197        161 IHFDDLQ-----WERRYNRVAAYGQSKLANLLFTYELQRRLA---AAGATTIAVAAHPGVSNTELARNLPRALRPVAT-V  231 (306)
T ss_pred             CCccccC-----cccCCCcHHHHHHHHHHHHHHHHHHHHHhh---cCCCCeEEEEeCCCcccCcccccCcHHHHHHHH-H
Confidence            1111111     113456778999999999999999999997   66766655  57999999998876553322111 1


Q ss_pred             HHHhcCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCc-------cccCCcccCCHHHHHHHHHHHHHhhhc
Q 017812          291 LKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGR-------TVNSSALSFNSKLAGELWTTSCNLFIN  355 (365)
Q Consensus       291 ~~~~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~-------~~~~~~~~~d~~~~~~lw~~~~~~~~~  355 (365)
                      ..+. ...+|++++..+++++..++..+|.||..+++.       ....+..+.|++.+++||+.++++++.
T Consensus       232 ~~~~-~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lw~~~~~~~~~  302 (306)
T PRK06197        232 LAPL-LAQSPEMGALPTLRAATDPAVRGGQYYGPDGFGEQRGYPKVVASSAQSHDEDLQRRLWAVSEELTGV  302 (306)
T ss_pred             HHhh-hcCCHHHHHHHHHHHhcCCCcCCCeEEccCcccccCCCCccCCCccccCCHHHHHHHHHHHHHHHCC
Confidence            1121 246899999999988887777789888755432       225567788999999999999999974

>PRK08303 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-42  Score=320.56  Aligned_cols=272  Identities=19%  Similarity=0.238  Sum_probs=214.8

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCc----------hhHHHHHHHHHhhcCCCceEEEEecCCChh
Q 017812           54 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS----------HLLSETMADITSRNKDARLEAFQVDLSSFQ  123 (365)
Q Consensus        54 ~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~----------~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~  123 (365)
                      +.+++||+++||||++|||+++|++|++.|++|++++|+.          ++++++.+++...  +.++.++++|++|++
T Consensus         3 ~~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dv~~~~   80 (305)
T PRK08303          3 MKPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAA--GGRGIAVQVDHLVPE   80 (305)
T ss_pred             CcCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhc--CCceEEEEcCCCCHH
Confidence            3457899999999999999999999999999999999984          4566666666543  456788999999999


Q ss_pred             hHHHHHHHHHHHHhccCCCCCeeEEEecC-Ccc------cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCe
Q 017812          124 SVLKFKDSLQQWLLDSDMHSSIQLLINNA-GIL------ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSR  196 (365)
Q Consensus       124 ~v~~~~~~~~~~~~~~~~~~~id~lv~nA-G~~------~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~  196 (365)
                      +++++++++.+      .+++||+||||| |+.      .+..+.+.+++++++++|+.++++++++++|+|.+++ .|+
T Consensus        81 ~v~~~~~~~~~------~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~-~g~  153 (305)
T PRK08303         81 QVRALVERIDR------EQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRP-GGL  153 (305)
T ss_pred             HHHHHHHHHHH------HcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCC-CcE
Confidence            99999999988      668999999999 852      3344667899999999999999999999999998765 589


Q ss_pred             EEEEcCCcccccccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcc
Q 017812          197 IVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIM  276 (365)
Q Consensus       197 iV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~  276 (365)
                      ||++||..+...                 ..+.++...|++||+|+.+|+++|+.|++   +.||+||+|+||+|+|++.
T Consensus       154 IV~isS~~~~~~-----------------~~~~~~~~~Y~asKaal~~lt~~La~el~---~~gIrVn~v~PG~v~T~~~  213 (305)
T PRK08303        154 VVEITDGTAEYN-----------------ATHYRLSVFYDLAKTSVNRLAFSLAHELA---PHGATAVALTPGWLRSEMM  213 (305)
T ss_pred             EEEECCcccccc-----------------CcCCCCcchhHHHHHHHHHHHHHHHHHhh---hcCcEEEEecCCccccHHH
Confidence            999999765310                 01234567899999999999999999998   7899999999999999985


Q ss_pred             ccch--hHHHHHHHHHHHH-hcCCCCHHHHHHHHHHHhcCCC--CCcccEEeCCCCccccCCcccCCHHHHHHHHHHHHH
Q 017812          277 REVP--SFLSLMAFTVLKL-LGLLQSPEKGINSVLDAALAPP--ETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCN  351 (365)
Q Consensus       277 ~~~~--~~~~~~~~~~~~~-~~~~~~p~e~A~~i~~~~l~~~--~~~G~~~~~~~g~~~~~~~~~~d~~~~~~lw~~~~~  351 (365)
                      ....  ............| +++..+|+|+|+.+++++....  ..+|+++.  ++....+..+..+++.+++||+++++
T Consensus       214 ~~~~~~~~~~~~~~~~~~p~~~~~~~peevA~~v~fL~s~~~~~~itG~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (305)
T PRK08303        214 LDAFGVTEENWRDALAKEPHFAISETPRYVGRAVAALAADPDVARWNGQSLS--SGQLARVYGFTDLDGSRPDAWRYLVE  291 (305)
T ss_pred             HHhhccCccchhhhhccccccccCCCHHHHHHHHHHHHcCcchhhcCCcEEE--hHHHHHhcCccCCCCCCCcchhhhhh
Confidence            4211  0000111111234 3567799999999996543331  35899987  45566777888889999999999998


Q ss_pred             hhhcc
Q 017812          352 LFINS  356 (365)
Q Consensus       352 ~~~~~  356 (365)
                      .-..-
T Consensus       292 ~~~~~  296 (305)
T PRK08303        292 VQDAG  296 (305)
T ss_pred             ccccC
Confidence            75443

>PRK08339 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-41  Score=308.48  Aligned_cols=244  Identities=19%  Similarity=0.256  Sum_probs=205.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      +++||+++||||++|||+++|++|+++|++|++++|+.++++++.+++.+.. +.++.++++|++|+++++++++++.+ 
T Consensus         5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~i~~~~~~~~~-   82 (263)
T PRK08339          5 DLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSES-NVDVSYIVADLTKREDLERTVKELKN-   82 (263)
T ss_pred             CCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc-CCceEEEEecCCCHHHHHHHHHHHHh-
Confidence            3789999999999999999999999999999999999999888888876543 45788999999999999999998753 


Q ss_pred             HhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                            ++++|++|||||+..  +..+.+.++|++++++|+.++++++++++|+|++++ .|+||++||.++.       
T Consensus        83 ------~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~-~g~Ii~isS~~~~-------  148 (263)
T PRK08339         83 ------IGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKG-FGRIIYSTSVAIK-------  148 (263)
T ss_pred             ------hCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEcCcccc-------
Confidence                  578999999999863  345788999999999999999999999999998775 6899999999987       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh----------HH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS----------FL  283 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~----------~~  283 (365)
                                   .+.+.+..|+++|+|+++|++++++|++   +.||+||+|+||+|+|++......          ..
T Consensus       149 -------------~~~~~~~~y~asKaal~~l~~~la~el~---~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  212 (263)
T PRK08339        149 -------------EPIPNIALSNVVRISMAGLVRTLAKELG---PKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEE  212 (263)
T ss_pred             -------------CCCCcchhhHHHHHHHHHHHHHHHHHhc---ccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHH
Confidence                         7778889999999999999999999998   899999999999999998653211          11


Q ss_pred             HHHHHHHHHHhcCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCcccc
Q 017812          284 SLMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTVN  331 (365)
Q Consensus       284 ~~~~~~~~~~~~~~~~p~e~A~~i~~~~l~-~~~~~G~~~~~~~g~~~~  331 (365)
                      .........|++|+.+|+|+|+++++++.. +...+|+.+..++|...+
T Consensus       213 ~~~~~~~~~p~~r~~~p~dva~~v~fL~s~~~~~itG~~~~vdgG~~~~  261 (263)
T PRK08339        213 ALQEYAKPIPLGRLGEPEEIGYLVAFLASDLGSYINGAMIPVDGGRLNS  261 (263)
T ss_pred             HHHHHhccCCcccCcCHHHHHHHHHHHhcchhcCccCceEEECCCcccc
Confidence            111122234778999999999999954432 125689999989887653

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.6e-41  Score=306.94  Aligned_cols=239  Identities=17%  Similarity=0.215  Sum_probs=195.0

Q ss_pred             CCCCEEEEecCC--ChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           57 IKRPVCIVTGAT--SGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        57 ~~~k~vlITGas--sGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      +++|+++||||+  +|||+++|++|+++|++|++++|+.+ .++..+++.+..+ .. .++++|++|.++++++++++.+
T Consensus         3 l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~-~~~~~~~~~~~~~-~~-~~~~~Dv~d~~~v~~~~~~i~~   79 (274)
T PRK08415          3 MKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEA-LKKRVEPIAQELG-SD-YVYELDVSKPEHFKSLAESLKK   79 (274)
T ss_pred             cCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHH-HHHHHHHHHHhcC-Cc-eEEEecCCCHHHHHHHHHHHHH
Confidence            679999999997  89999999999999999999999853 3333444433322 23 6789999999999999999987


Q ss_pred             HHhccCCCCCeeEEEecCCccc------CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccc
Q 017812          135 WLLDSDMHSSIQLLINNAGILA------TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNV  208 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~------~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~  208 (365)
                            .++++|+||||||+..      +..+.+.++|++++++|+.|++++++.++|+|.+   .|+||++||.++.  
T Consensus        80 ------~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~---~g~Iv~isS~~~~--  148 (274)
T PRK08415         80 ------DLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLND---GASVLTLSYLGGV--  148 (274)
T ss_pred             ------HcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhcc---CCcEEEEecCCCc--
Confidence                  6689999999999852      3457789999999999999999999999999975   3899999999877  


Q ss_pred             ccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHH
Q 017812          209 FNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAF  288 (365)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~  288 (365)
                                        .+.+.+..|++||+|+.+|+++|+.|++   ++||+||+|+||+|+|++.............
T Consensus       149 ------------------~~~~~~~~Y~asKaal~~l~~~la~el~---~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~  207 (274)
T PRK08415        149 ------------------KYVPHYNVMGVAKAALESSVRYLAVDLG---KKGIRVNAISAGPIKTLAASGIGDFRMILKW  207 (274)
T ss_pred             ------------------cCCCcchhhhhHHHHHHHHHHHHHHHhh---hcCeEEEEEecCccccHHHhccchhhHHhhh
Confidence                              6677888999999999999999999998   8999999999999999876543221111111


Q ss_pred             -HHHHHhcCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCccc
Q 017812          289 -TVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTV  330 (365)
Q Consensus       289 -~~~~~~~~~~~p~e~A~~i~~~~l~-~~~~~G~~~~~~~g~~~  330 (365)
                       ....|++|+.+|+|+|+.+++++.. +...+|+.+..++|...
T Consensus       208 ~~~~~pl~r~~~pedva~~v~fL~s~~~~~itG~~i~vdGG~~~  251 (274)
T PRK08415        208 NEINAPLKKNVSIEEVGNSGMYLLSDLSSGVTGEIHYVDAGYNI  251 (274)
T ss_pred             hhhhCchhccCCHHHHHHHHHHHhhhhhhcccccEEEEcCcccc
Confidence             1224778899999999999954432 23568999999998765

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=7.3e-41  Score=301.67  Aligned_cols=236  Identities=17%  Similarity=0.193  Sum_probs=195.0

Q ss_pred             CCCCEEEEecCC--ChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           57 IKRPVCIVTGAT--SGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        57 ~~~k~vlITGas--sGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      ++||+++||||+  +|||+++|++|+++|++|++++|+. +.++..+++.    +.+++++++|++|+++++++++++.+
T Consensus         5 l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~----~~~~~~~~~Dl~~~~~v~~~~~~~~~   79 (252)
T PRK06079          5 LSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLV----DEEDLLVECDVASDESIERAFATIKE   79 (252)
T ss_pred             cCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhc----cCceeEEeCCCCCHHHHHHHHHHHHH
Confidence            679999999999  7999999999999999999999983 4444444442    23678999999999999999999988


Q ss_pred             HHhccCCCCCeeEEEecCCccc------CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccc
Q 017812          135 WLLDSDMHSSIQLLINNAGILA------TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNV  208 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~------~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~  208 (365)
                            .++++|+||||||+..      +..+.+.++|++++++|+.+++++++.++|+|.+   .|+||++||.++.  
T Consensus        80 ------~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~---~g~Iv~iss~~~~--  148 (252)
T PRK06079         80 ------RVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNP---GASIVTLTYFGSE--  148 (252)
T ss_pred             ------HhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhccc---CceEEEEeccCcc--
Confidence                  5688999999999863      3456789999999999999999999999999964   4899999999887  


Q ss_pred             ccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH-HHHHH
Q 017812          209 FNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF-LSLMA  287 (365)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~-~~~~~  287 (365)
                                        .+.+.+.+|++||+|+++|+++|+.|++   ++||+||+|+||+|+|++....... .....
T Consensus       149 ------------------~~~~~~~~Y~asKaal~~l~~~la~el~---~~gI~vn~i~PG~v~T~~~~~~~~~~~~~~~  207 (252)
T PRK06079        149 ------------------RAIPNYNVMGIAKAALESSVRYLARDLG---KKGIRVNAISAGAVKTLAVTGIKGHKDLLKE  207 (252)
T ss_pred             ------------------ccCCcchhhHHHHHHHHHHHHHHHHHhh---hcCcEEEEEecCcccccccccCCChHHHHHH
Confidence                              6778889999999999999999999998   8899999999999999987543211 11111


Q ss_pred             HHHHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017812          288 FTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  329 (365)
Q Consensus       288 ~~~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~  329 (365)
                      .....|++|+.+|+|+|+++++++... ...+|+.+..++|..
T Consensus       208 ~~~~~p~~r~~~pedva~~~~~l~s~~~~~itG~~i~vdgg~~  250 (252)
T PRK06079        208 SDSRTVDGVGVTIEEVGNTAAFLLSDLSTGVTGDIIYVDKGVH  250 (252)
T ss_pred             HHhcCcccCCCCHHHHHHHHHHHhCcccccccccEEEeCCcee
Confidence            222346788999999999999544332 356899998888743

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.4e-40  Score=301.14  Aligned_cols=243  Identities=15%  Similarity=0.177  Sum_probs=198.1

Q ss_pred             CCCCEEEEecCCC--hHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATS--GLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        57 ~~~k~vlITGass--GIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      ++||+++||||++  |||+++|++|+++|++|++++|+. +.++..+++.+.. +. ..++++|++|+++++++++++.+
T Consensus         6 ~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~~-g~-~~~~~~Dv~~~~~v~~~~~~~~~   82 (260)
T PRK06603          6 LQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEEI-GC-NFVSELDVTNPKSISNLFDDIKE   82 (260)
T ss_pred             cCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHhc-CC-ceEEEccCCCHHHHHHHHHHHHH
Confidence            6799999999997  999999999999999999999984 4445556665443 22 24679999999999999999988


Q ss_pred             HHhccCCCCCeeEEEecCCccc------CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccc
Q 017812          135 WLLDSDMHSSIQLLINNAGILA------TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNV  208 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~------~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~  208 (365)
                            .++++|+||||||+..      +..+.+.++|++++++|+.+++.+++.++|+|.+   .|+||++||.++.  
T Consensus        83 ------~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~---~G~Iv~isS~~~~--  151 (260)
T PRK06603         83 ------KWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHD---GGSIVTLTYYGAE--  151 (260)
T ss_pred             ------HcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc---CceEEEEecCccc--
Confidence                  5689999999999753      3457789999999999999999999999999964   4899999998877  


Q ss_pred             ccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHH-HHHH
Q 017812          209 FNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFL-SLMA  287 (365)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~-~~~~  287 (365)
                                        .+.+.+.+|++||+|+++|+++|+.|++   ++||+||+|+||+|+|++....+... ....
T Consensus       152 ------------------~~~~~~~~Y~asKaal~~l~~~la~el~---~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~  210 (260)
T PRK06603        152 ------------------KVIPNYNVMGVAKAALEASVKYLANDMG---ENNIRVNAISAGPIKTLASSAIGDFSTMLKS  210 (260)
T ss_pred             ------------------cCCCcccchhhHHHHHHHHHHHHHHHhh---hcCeEEEEEecCcCcchhhhcCCCcHHHHHH
Confidence                              6777889999999999999999999998   89999999999999999865332111 1111


Q ss_pred             HHHHHHhcCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCccccCCc
Q 017812          288 FTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTVNSSA  334 (365)
Q Consensus       288 ~~~~~~~~~~~~p~e~A~~i~~~~l~-~~~~~G~~~~~~~g~~~~~~~  334 (365)
                      .....|++|+.+|+|+|+++++++.. +...+|+.+..|+|..+..+.
T Consensus       211 ~~~~~p~~r~~~pedva~~~~~L~s~~~~~itG~~i~vdgG~~~~~~~  258 (260)
T PRK06603        211 HAATAPLKRNTTQEDVGGAAVYLFSELSKGVTGEIHYVDCGYNIMGSN  258 (260)
T ss_pred             HHhcCCcCCCCCHHHHHHHHHHHhCcccccCcceEEEeCCcccccCcC
Confidence            22234778899999999999954432 235689999999987765443

>PLN00015 protochlorophyllide reductase

Probab=100.00  E-value=3.6e-40  Score=305.70  Aligned_cols=282  Identities=26%  Similarity=0.367  Sum_probs=216.6

Q ss_pred             EEecCCChHHHHHHHHHHHCC-CEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhccCC
Q 017812           63 IVTGATSGLGAAAAYALSREG-FHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDM  141 (365)
Q Consensus        63 lITGassGIG~~~a~~la~~G-~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~~~  141 (365)
                      ||||||+|||+++|++|+++| ++|++++|+.++++++.+++...  +.++.++++|++|.++++++++++.+      .
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~d~~~v~~~~~~~~~------~   72 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMP--KDSYTVMHLDLASLDSVRQFVDNFRR------S   72 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCC--CCeEEEEEecCCCHHHHHHHHHHHHh------c
Confidence            699999999999999999999 99999999998888887777432  45788899999999999999999887      5


Q ss_pred             CCCeeEEEecCCccc---CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCC-CCeEEEEcCCccccccc-----cc
Q 017812          142 HSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPV-PSRIVNVTSFTHRNVFN-----AQ  212 (365)
Q Consensus       142 ~~~id~lv~nAG~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~-~g~iV~vsS~~~~~~~~-----~~  212 (365)
                      ++++|+||||||+..   +..+.+.++++++|++|+.|++.+++.++|.|++++. .|+||++||.++.....     ..
T Consensus        73 ~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~  152 (308)
T PLN00015         73 GRPLDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPK  152 (308)
T ss_pred             CCCCCEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCc
Confidence            688999999999863   2346789999999999999999999999999987631 48999999998753211     00


Q ss_pred             CCCcccc----------ccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcc-cCCccccchh
Q 017812          213 VNNETIT----------GKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVV-KTNIMREVPS  281 (365)
Q Consensus       213 ~~~~~~~----------~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v-~T~~~~~~~~  281 (365)
                      .+...+.          ...+....++++..+|++||+|+..+++.+++++..  ..||+|++++||+| +|+|.+....
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~--~~gi~v~~v~PG~v~~t~~~~~~~~  230 (308)
T PLN00015        153 ANLGDLRGLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHE--ETGITFASLYPGCIATTGLFREHIP  230 (308)
T ss_pred             cchhhhhhhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcc--cCCeEEEEecCCcccCccccccccH
Confidence            0000000          000001134567889999999999999999999961  36999999999999 7999865432


Q ss_pred             HHHHH-HHHHHHHhcCCCCHHHHHHHHHHHhcCCC-CCcccEEeCCCC---ccccCCcccCCHHHHHHHHHHHHHhhh
Q 017812          282 FLSLM-AFTVLKLLGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKG---RTVNSSALSFNSKLAGELWTTSCNLFI  354 (365)
Q Consensus       282 ~~~~~-~~~~~~~~~~~~~p~e~A~~i~~~~l~~~-~~~G~~~~~~~g---~~~~~~~~~~d~~~~~~lw~~~~~~~~  354 (365)
                      ..... ......+.+++.+|+++|+.+++++.... ..+|.||..+++   ++..++..+.|++.+++||+.++++++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~pe~~a~~~~~l~~~~~~~~~G~~~~~~g~~~~~~~~~~~~a~d~~~~~~lw~~~~~~~~  308 (308)
T PLN00015        231 LFRLLFPPFQKYITKGYVSEEEAGKRLAQVVSDPSLTKSGVYWSWNGGSASFENQLSQEASDAEKAKKVWEISEKLVG  308 (308)
T ss_pred             HHHHHHHHHHHHHhcccccHHHhhhhhhhhccccccCCCccccccCCcccccccCcChhhcCHHHHHHHHHHHHHhcC
Confidence            22111 11122345567899999999997666543 568998875543   345788889999999999999999864

>PRK06196 oxidoreductase; Provisional

Probab=100.00  E-value=6.6e-40  Score=304.99  Aligned_cols=275  Identities=25%  Similarity=0.382  Sum_probs=215.4

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.++++++.+++.      .+.++++|++|.++++++++++.+
T Consensus        22 ~~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~------~v~~~~~Dl~d~~~v~~~~~~~~~   95 (315)
T PRK06196         22 HDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID------GVEVVMLDLADLESVRAFAERFLD   95 (315)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh------hCeEEEccCCCHHHHHHHHHHHHh
Confidence            35789999999999999999999999999999999999988877776652      367899999999999999999887


Q ss_pred             HHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017812          135 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  214 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~  214 (365)
                            .++++|+||||||+..+....+.++++..+++|+.|++++++.++|.|.+++ .++||++||.++....   ..
T Consensus        96 ------~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~-~~~iV~vSS~~~~~~~---~~  165 (315)
T PRK06196         96 ------SGRRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGA-GARVVALSSAGHRRSP---IR  165 (315)
T ss_pred             ------cCCCCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCeEEEECCHHhccCC---CC
Confidence                  6688999999999875555667889999999999999999999999998775 5899999998654211   11


Q ss_pred             CccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHH-HHH--HHH
Q 017812          215 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSL-MAF--TVL  291 (365)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~-~~~--~~~  291 (365)
                      .++...     ..++++...|+.||+|++.+++.+++++.   ++||++++|+||++.|++.+..+..... ...  ...
T Consensus       166 ~~~~~~-----~~~~~~~~~Y~~SK~a~~~~~~~la~~~~---~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~  237 (315)
T PRK06196        166 WDDPHF-----TRGYDKWLAYGQSKTANALFAVHLDKLGK---DQGVRAFSVHPGGILTPLQRHLPREEQVALGWVDEHG  237 (315)
T ss_pred             ccccCc-----cCCCChHHHHHHHHHHHHHHHHHHHHHhc---CCCcEEEEeeCCcccCCccccCChhhhhhhhhhhhhh
Confidence            111100     14566778999999999999999999997   7899999999999999998765432111 000  001


Q ss_pred             HHhc-CCCCHHHHHHHHHHHhcCCCC--CcccEEeCCCCccc----------cCCcccCCHHHHHHHHHHHHHhhhc
Q 017812          292 KLLG-LLQSPEKGINSVLDAALAPPE--TSGVYFFGGKGRTV----------NSSALSFNSKLAGELWTTSCNLFIN  355 (365)
Q Consensus       292 ~~~~-~~~~p~e~A~~i~~~~l~~~~--~~G~~~~~~~g~~~----------~~~~~~~d~~~~~~lw~~~~~~~~~  355 (365)
                      .++. ++.+|+++|..+++++..++.  .+|.|+. + .+..          ..+..+.|++.+++||+.++++++.
T Consensus       238 ~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~g~~~~-~-~~~~~~~~~~~~~~~~~~~~~d~~~~~~lW~~s~~~~~~  312 (315)
T PRK06196        238 NPIDPGFKTPAQGAATQVWAATSPQLAGMGGLYCE-D-CDIAEPTPKDAPWSGVRPHAIDPEAAARLWALSAALTGV  312 (315)
T ss_pred             hhhhhhcCCHhHHHHHHHHHhcCCccCCCCCeEeC-C-CcccccCCcccccCCCCcccCCHHHHHHHHHHHHHHHCC
Confidence            1222 467999999999988876553  3455543 3 2222          2345578999999999999999864

>PRK07063 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-40  Score=299.91  Aligned_cols=245  Identities=26%  Similarity=0.295  Sum_probs=207.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++...+.+.++.++++|++|+++++++++++.+ 
T Consensus         4 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-   82 (260)
T PRK07063          4 RLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEE-   82 (260)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHH-
Confidence            4679999999999999999999999999999999999999999888887644456789999999999999999999988 


Q ss_pred             HhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                           .++++|+||||||+..  +..+.+.++|++++++|+.+++.++++++|.|.+++ .|+||++||..+.       
T Consensus        83 -----~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~-------  149 (260)
T PRK07063         83 -----AFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERG-RGSIVNIASTHAF-------  149 (260)
T ss_pred             -----HhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhC-CeEEEEECChhhc-------
Confidence                 5689999999999753  344678899999999999999999999999998765 6899999999887       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccch----hHH-HHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP----SFL-SLMAF  288 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~----~~~-~~~~~  288 (365)
                                   .+.++..+|++||+|+++|+++++.|++   +.||+||+|+||+|+|++.....    ... .....
T Consensus       150 -------------~~~~~~~~Y~~sKaa~~~~~~~la~el~---~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~  213 (260)
T PRK07063        150 -------------KIIPGCFPYPVAKHGLLGLTRALGIEYA---ARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAET  213 (260)
T ss_pred             -------------cCCCCchHHHHHHHHHHHHHHHHHHHhC---ccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHH
Confidence                         6777888999999999999999999998   78999999999999999865421    111 11112


Q ss_pred             HHHHHhcCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCccc
Q 017812          289 TVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTV  330 (365)
Q Consensus       289 ~~~~~~~~~~~p~e~A~~i~~~~l~-~~~~~G~~~~~~~g~~~  330 (365)
                      ....|++|+.+|+|+|+.+++++.. +...+|+.+..|+|...
T Consensus       214 ~~~~~~~r~~~~~~va~~~~fl~s~~~~~itG~~i~vdgg~~~  256 (260)
T PRK07063        214 LALQPMKRIGRPEEVAMTAVFLASDEAPFINATCITIDGGRSV  256 (260)
T ss_pred             HhcCCCCCCCCHHHHHHHHHHHcCccccccCCcEEEECCCeee
Confidence            2335778899999999999954432 12568999988888643

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2e-40  Score=301.75  Aligned_cols=239  Identities=13%  Similarity=0.129  Sum_probs=193.9

Q ss_pred             CCCCEEEEecCCC--hHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATS--GLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        57 ~~~k~vlITGass--GIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      +++|++|||||++  |||+++|++|+++|++|++++|+.+..++ .+++.+.. + ...++++|++|.++++++++++.+
T Consensus         5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~-~~~~~~~~-g-~~~~~~~Dv~d~~~v~~~~~~~~~   81 (271)
T PRK06505          5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKR-VKPLAESL-G-SDFVLPCDVEDIASVDAVFEALEK   81 (271)
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHH-HHHHHHhc-C-CceEEeCCCCCHHHHHHHHHHHHH
Confidence            6799999999996  99999999999999999999998644333 33443322 2 235789999999999999999988


Q ss_pred             HHhccCCCCCeeEEEecCCccc------CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccc
Q 017812          135 WLLDSDMHSSIQLLINNAGILA------TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNV  208 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~------~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~  208 (365)
                            .++++|+||||||+..      +..+.+.++|++++++|+.++++++++++|+|.+   .|+||++||.++.  
T Consensus        82 ------~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~---~G~Iv~isS~~~~--  150 (271)
T PRK06505         82 ------KWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD---GGSMLTLTYGGST--  150 (271)
T ss_pred             ------HhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc---CceEEEEcCCCcc--
Confidence                  5689999999999863      3446789999999999999999999999999974   4899999999887  


Q ss_pred             ccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHH-H
Q 017812          209 FNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLM-A  287 (365)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~-~  287 (365)
                                        .+.+.+.+|++||+|+.+|+++|+.|++   +.||+||+|+||+|+|++........... .
T Consensus       151 ------------------~~~~~~~~Y~asKaAl~~l~r~la~el~---~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~  209 (271)
T PRK06505        151 ------------------RVMPNYNVMGVAKAALEASVRYLAADYG---PQGIRVNAISAGPVRTLAGAGIGDARAIFSY  209 (271)
T ss_pred             ------------------ccCCccchhhhhHHHHHHHHHHHHHHHh---hcCeEEEEEecCCccccccccCcchHHHHHH
Confidence                              6777888999999999999999999998   88999999999999999865432211111 1


Q ss_pred             HHHHHHhcCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCccc
Q 017812          288 FTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTV  330 (365)
Q Consensus       288 ~~~~~~~~~~~~p~e~A~~i~~~~l~-~~~~~G~~~~~~~g~~~  330 (365)
                      .....|++|+.+|+|+|+++++++.. +...+|+.+..|+|...
T Consensus       210 ~~~~~p~~r~~~peeva~~~~fL~s~~~~~itG~~i~vdgG~~~  253 (271)
T PRK06505        210 QQRNSPLRRTVTIDEVGGSALYLLSDLSSGVTGEIHFVDSGYNI  253 (271)
T ss_pred             HhhcCCccccCCHHHHHHHHHHHhCccccccCceEEeecCCccc
Confidence            11224677889999999999954322 12458999999988654

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.6e-40  Score=300.93  Aligned_cols=240  Identities=15%  Similarity=0.141  Sum_probs=196.1

Q ss_pred             CCCCEEEEecC--CChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           57 IKRPVCIVTGA--TSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        57 ~~~k~vlITGa--ssGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      +++|+++||||  ++|||+++|++|+++|++|++++|+. +.++..+++....+  ....++||++|+++++++++++.+
T Consensus         4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~   80 (261)
T PRK08690          4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVD-KLEERVRKMAAELD--SELVFRCDVASDDEINQVFADLGK   80 (261)
T ss_pred             cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHhccC--CceEEECCCCCHHHHHHHHHHHHH
Confidence            67999999997  67999999999999999999998863 44455555544432  346789999999999999999988


Q ss_pred             HHhccCCCCCeeEEEecCCcccC-------CCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccc
Q 017812          135 WLLDSDMHSSIQLLINNAGILAT-------SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRN  207 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~~-------~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~  207 (365)
                            .++++|+||||||+...       ..+.+.+.|+.++++|+.++++++++++|+|+++  .|+||++||.++. 
T Consensus        81 ------~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~--~g~Iv~iss~~~~-  151 (261)
T PRK08690         81 ------HWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGR--NSAIVALSYLGAV-  151 (261)
T ss_pred             ------HhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhc--CcEEEEEcccccc-
Confidence                  56899999999998642       1346778999999999999999999999999754  4899999999887 


Q ss_pred             cccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHH-H
Q 017812          208 VFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSL-M  286 (365)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~-~  286 (365)
                                         .+.+++..|++||+|+++|+++++.|++   ++||+||+|+||+|+|++.......... .
T Consensus       152 -------------------~~~~~~~~Y~asKaal~~l~~~la~e~~---~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~  209 (261)
T PRK08690        152 -------------------RAIPNYNVMGMAKASLEAGIRFTAACLG---KEGIRCNGISAGPIKTLAASGIADFGKLLG  209 (261)
T ss_pred             -------------------cCCCCcccchhHHHHHHHHHHHHHHHhh---hcCeEEEEEecCcccchhhhcCCchHHHHH
Confidence                               6778889999999999999999999998   8899999999999999987654321111 1


Q ss_pred             HHHHHHHhcCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCccc
Q 017812          287 AFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTV  330 (365)
Q Consensus       287 ~~~~~~~~~~~~~p~e~A~~i~~~~l~-~~~~~G~~~~~~~g~~~  330 (365)
                      ......|++|+.+|+|+|+.+++++-. +...+|+.+..|+|..+
T Consensus       210 ~~~~~~p~~r~~~peevA~~v~~l~s~~~~~~tG~~i~vdgG~~~  254 (261)
T PRK08690        210 HVAAHNPLRRNVTIEEVGNTAAFLLSDLSSGITGEITYVDGGYSI  254 (261)
T ss_pred             HHhhcCCCCCCCCHHHHHHHHHHHhCcccCCcceeEEEEcCCccc
Confidence            122234778999999999999954432 23568999999988654

>PRK08589 short chain dehydrogenase; Validated

Probab=100.00  E-value=3.7e-40  Score=300.46  Aligned_cols=257  Identities=25%  Similarity=0.378  Sum_probs=210.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      ++++|++|||||++|||+++|++|+++|++|++++|+ +++++..+++.+.  +.++.++++|+++++++.++++++.+ 
T Consensus         3 ~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~-   78 (272)
T PRK08589          3 RLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSN--GGKAKAYHVDISDEQQVKDFASEIKE-   78 (272)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhc--CCeEEEEEeecCCHHHHHHHHHHHHH-
Confidence            4679999999999999999999999999999999999 7788888887654  45788999999999999999999988 


Q ss_pred             HhccCCCCCeeEEEecCCccc---CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017812          136 LLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~  212 (365)
                           .++++|+||||||+..   +..+.+.+.+++++++|+.|++++++.++|+|++++  |+||++||.++.      
T Consensus        79 -----~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--g~iv~isS~~~~------  145 (272)
T PRK08589         79 -----QFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG--GSIINTSSFSGQ------  145 (272)
T ss_pred             -----HcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--CEEEEeCchhhc------
Confidence                 6688999999999863   334668899999999999999999999999998764  899999999887      


Q ss_pred             CCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHH-H--HH--
Q 017812          213 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLS-L--MA--  287 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~-~--~~--  287 (365)
                                    .+.++..+|++||+|+++|++++++|+.   +.||+||+|+||+|+|++.+....... .  ..  
T Consensus       146 --------------~~~~~~~~Y~asKaal~~l~~~la~e~~---~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~  208 (272)
T PRK08589        146 --------------AADLYRSGYNAAKGAVINFTKSIAIEYG---RDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFR  208 (272)
T ss_pred             --------------CCCCCCchHHHHHHHHHHHHHHHHHHhh---hcCeEEEEEecCcccCchhhhhcccchhhHHHHHh
Confidence                          6667788999999999999999999998   789999999999999998765322111 0  00  


Q ss_pred             --HHHHHHhcCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCccccCCcccCCHHHHHHHHHHH
Q 017812          288 --FTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTS  349 (365)
Q Consensus       288 --~~~~~~~~~~~~p~e~A~~i~~~~l~-~~~~~G~~~~~~~g~~~~~~~~~~d~~~~~~lw~~~  349 (365)
                        .....|++++.+|+|+|+.+++++.. +...+|+.+..++|....   ...+..+++..|+.+
T Consensus       209 ~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~vdgg~~~~---~~~~~~~~~~~~~~~  270 (272)
T PRK08589        209 ENQKWMTPLGRLGKPEEVAKLVVFLASDDSSFITGETIRIDGGVMAY---TWPGEMLSDDSWKRT  270 (272)
T ss_pred             hhhhccCCCCCCcCHHHHHHHHHHHcCchhcCcCCCEEEECCCcccC---CCCCcccccchhhhh
Confidence              11123667888999999999964432 236689999888886532   122555566777765

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-40  Score=297.80  Aligned_cols=240  Identities=20%  Similarity=0.254  Sum_probs=197.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      ++++|+++||||++|||+++|++|+++|++|++++|+..  ++..+++.+.  +.++.++++|++|+++++++++++.+ 
T Consensus         5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~--~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~-   79 (251)
T PRK12481          5 DLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA--PETQAQVEAL--GRKFHFITADLIQQKDIDSIVSQAVE-   79 (251)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH--HHHHHHHHHc--CCeEEEEEeCCCCHHHHHHHHHHHHH-
Confidence            478999999999999999999999999999999998743  3344444433  45788999999999999999999887 


Q ss_pred             HhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                           .++++|+||||||+..  +..+.++++|++++++|+.+++.++++++|+|.+++..|+||++||.++.       
T Consensus        80 -----~~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~-------  147 (251)
T PRK12481         80 -----VMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSF-------  147 (251)
T ss_pred             -----HcCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhc-------
Confidence                 5688999999999863  34567899999999999999999999999999876435899999999987       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHH-HHHHHHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFL-SLMAFTVLK  292 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~-~~~~~~~~~  292 (365)
                                   .+.+....|++||+|+++|+++++.|++   +.||+||+|+||+|+|++........ .........
T Consensus       148 -------------~~~~~~~~Y~asK~a~~~l~~~la~e~~---~~girvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~  211 (251)
T PRK12481        148 -------------QGGIRVPSYTASKSAVMGLTRALATELS---QYNINVNAIAPGYMATDNTAALRADTARNEAILERI  211 (251)
T ss_pred             -------------CCCCCCcchHHHHHHHHHHHHHHHHHHh---hcCeEEEEEecCCCccCchhhcccChHHHHHHHhcC
Confidence                         6667778999999999999999999998   88999999999999999876542211 111122234


Q ss_pred             HhcCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCc
Q 017812          293 LLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGR  328 (365)
Q Consensus       293 ~~~~~~~p~e~A~~i~~~~l~-~~~~~G~~~~~~~g~  328 (365)
                      |.+++.+|+|+|+++++++.. +...+|+.+..++|.
T Consensus       212 p~~~~~~peeva~~~~~L~s~~~~~~~G~~i~vdgg~  248 (251)
T PRK12481        212 PASRWGTPDDLAGPAIFLSSSASDYVTGYTLAVDGGW  248 (251)
T ss_pred             CCCCCcCHHHHHHHHHHHhCccccCcCCceEEECCCE
Confidence            677889999999999954432 235689998888874

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=100.00  E-value=1.9e-39  Score=301.43  Aligned_cols=287  Identities=26%  Similarity=0.395  Sum_probs=217.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCC-CEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREG-FHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G-~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      .+|+++||||++|||+++|++|+++| ++|++++|+.++++++.+++...  +.++.++.+|++|.++++++++++.+  
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~--   77 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMP--KDSYTIMHLDLGSLDSVRQFVQQFRE--   77 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCC--CCeEEEEEcCCCCHHHHHHHHHHHHH--
Confidence            37899999999999999999999999 99999999999888887777432  45788899999999999999999887  


Q ss_pred             hccCCCCCeeEEEecCCcccCC---CCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCC-CCCeEEEEcCCccccccc-c
Q 017812          137 LDSDMHSSIQLLINNAGILATS---SRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP-VPSRIVNVTSFTHRNVFN-A  211 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~~~---~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~-~~g~iV~vsS~~~~~~~~-~  211 (365)
                          .++++|+||||||+..+.   .+.+.+++++++++|+.|++++++.++|.|++++ ..|+||++||.++..... .
T Consensus        78 ----~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~  153 (314)
T TIGR01289        78 ----SGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAG  153 (314)
T ss_pred             ----hCCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCC
Confidence                567899999999986432   3568899999999999999999999999998763 248999999998764311 1


Q ss_pred             ----cCCCccccc--------cccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcc-cCCcccc
Q 017812          212 ----QVNNETITG--------KFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVV-KTNIMRE  278 (365)
Q Consensus       212 ----~~~~~~~~~--------~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v-~T~~~~~  278 (365)
                          ..+..++..        ..+....++.+..+|++||+|+..+++.+++++.  .+.||+|++|+||+| +|++.++
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~--~~~gi~v~~v~PG~v~~T~l~~~  231 (314)
T TIGR01289       154 NVPPKANLGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFH--DETGITFASLYPGCIADTGLFRE  231 (314)
T ss_pred             cCCCcccccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhc--cCCCeEEEEecCCcccCCccccc
Confidence                011111100        0011123456778999999999999999999985  146899999999999 6999875


Q ss_pred             chhHHHHHH-HHHHHHhcCCCCHHHHHHHHHHHhcCCC-CCcccEEeCCCCcc---ccCCcccCCHHHHHHHHHHHHHhh
Q 017812          279 VPSFLSLMA-FTVLKLLGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKGRT---VNSSALSFNSKLAGELWTTSCNLF  353 (365)
Q Consensus       279 ~~~~~~~~~-~~~~~~~~~~~~p~e~A~~i~~~~l~~~-~~~G~~~~~~~g~~---~~~~~~~~d~~~~~~lw~~~~~~~  353 (365)
                      ......... .........+.+|++.|+.+++++...+ ..+|.||..++...   .+++..+.|++.+++||+.+++++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~lw~~~~~~~  311 (314)
T TIGR01289       232 HVPLFRTLFPPFQKYITKGYVSEEEAGERLAQVVSDPKLKKSGVYWSWGNRQESFVNQLSEEVSDDSKASKMWDLSEKLV  311 (314)
T ss_pred             ccHHHHHHHHHHHHHHhccccchhhhhhhhHHhhcCcccCCCceeeecCCcccccccCCChhhcCHHHHHHHHHHHHHHh
Confidence            432211111 1111112345799999999998777654 45788775433211   356777899999999999999997


Q ss_pred             h
Q 017812          354 I  354 (365)
Q Consensus       354 ~  354 (365)
                      +
T Consensus       312 ~  312 (314)
T TIGR01289       312 G  312 (314)
T ss_pred             c
Confidence            5

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=100.00  E-value=2.2e-40  Score=299.53  Aligned_cols=240  Identities=15%  Similarity=0.137  Sum_probs=195.7

Q ss_pred             CCCCCEEEEecCC--ChHHHHHHHHHHHCCCEEEEEecCch--hHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHH
Q 017812           56 GIKRPVCIVTGAT--SGLGAAAAYALSREGFHVVLVGRSSH--LLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDS  131 (365)
Q Consensus        56 ~~~~k~vlITGas--sGIG~~~a~~la~~G~~Vil~~r~~~--~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~  131 (365)
                      +++||+++||||+  +|||+++|++|+++|++|++++|+.+  +.++..+++.+..  .++.++++|++|++++++++++
T Consensus         3 ~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~d~~~v~~~~~~   80 (258)
T PRK07370          3 DLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPL--NPSLFLPCDVQDDAQIEETFET   80 (258)
T ss_pred             ccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhcc--CcceEeecCcCCHHHHHHHHHH
Confidence            3679999999986  89999999999999999999887643  3455566665442  3467899999999999999999


Q ss_pred             HHHHHhccCCCCCeeEEEecCCccc------CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017812          132 LQQWLLDSDMHSSIQLLINNAGILA------TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  205 (365)
Q Consensus       132 ~~~~~~~~~~~~~id~lv~nAG~~~------~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~  205 (365)
                      +.+      .++++|+||||||+..      +..+.+.++|++++++|+.|+++++++++|.|++   .|+||++||..+
T Consensus        81 ~~~------~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~---~g~Iv~isS~~~  151 (258)
T PRK07370         81 IKQ------KWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE---GGSIVTLTYLGG  151 (258)
T ss_pred             HHH------HcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh---CCeEEEEecccc
Confidence            988      5689999999999853      4457789999999999999999999999999975   489999999988


Q ss_pred             cccccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH-HH
Q 017812          206 RNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF-LS  284 (365)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~-~~  284 (365)
                      .                    .+.+++..|++||+|+++|+++|+.|+.   ++||+||+|+||+|+|++....... ..
T Consensus       152 ~--------------------~~~~~~~~Y~asKaal~~l~~~la~el~---~~gI~Vn~i~PG~v~T~~~~~~~~~~~~  208 (258)
T PRK07370        152 V--------------------RAIPNYNVMGVAKAALEASVRYLAAELG---PKNIRVNAISAGPIRTLASSAVGGILDM  208 (258)
T ss_pred             c--------------------cCCcccchhhHHHHHHHHHHHHHHHHhC---cCCeEEEEEecCcccCchhhccccchhh
Confidence            7                    6778889999999999999999999998   8999999999999999986543211 11


Q ss_pred             HHHHHHHHHhcCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCcc
Q 017812          285 LMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRT  329 (365)
Q Consensus       285 ~~~~~~~~~~~~~~~p~e~A~~i~~~~l~-~~~~~G~~~~~~~g~~  329 (365)
                      ........|++|+.+|+|+|+.+++++.. +...+|+.+..++|..
T Consensus       209 ~~~~~~~~p~~r~~~~~dva~~~~fl~s~~~~~~tG~~i~vdgg~~  254 (258)
T PRK07370        209 IHHVEEKAPLRRTVTQTEVGNTAAFLLSDLASGITGQTIYVDAGYC  254 (258)
T ss_pred             hhhhhhcCCcCcCCCHHHHHHHHHHHhChhhccccCcEEEECCccc
Confidence            11112234677899999999999954322 1256899888887753

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=5.5e-40  Score=296.98  Aligned_cols=240  Identities=14%  Similarity=0.120  Sum_probs=194.2

Q ss_pred             CCCCCCEEEEecCC--ChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHH
Q 017812           55 TGIKRPVCIVTGAT--SGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  132 (365)
Q Consensus        55 ~~~~~k~vlITGas--sGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~  132 (365)
                      .+++||+++||||+  +|||+++|++|+++|++|++++|+.+.. +..+++.+..  ..+.+++||++|.++++++++++
T Consensus         6 ~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~-~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~   82 (258)
T PRK07533          6 LPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKAR-PYVEPLAEEL--DAPIFLPLDVREPGQLEAVFARI   82 (258)
T ss_pred             cccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhH-HHHHHHHHhh--ccceEEecCcCCHHHHHHHHHHH
Confidence            34789999999998  5999999999999999999999986432 2233333322  13568899999999999999999


Q ss_pred             HHHHhccCCCCCeeEEEecCCccc------CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccc
Q 017812          133 QQWLLDSDMHSSIQLLINNAGILA------TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHR  206 (365)
Q Consensus       133 ~~~~~~~~~~~~id~lv~nAG~~~------~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~  206 (365)
                      .+      .++++|+||||||+..      +..+.+.++|++++++|+.|++++++.++|+|++   .|+||++||.++.
T Consensus        83 ~~------~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~---~g~Ii~iss~~~~  153 (258)
T PRK07533         83 AE------EWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTN---GGSLLTMSYYGAE  153 (258)
T ss_pred             HH------HcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhcc---CCEEEEEeccccc
Confidence            88      5689999999999853      3346789999999999999999999999999964   4899999998876


Q ss_pred             ccccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHH-
Q 017812          207 NVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSL-  285 (365)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~-  285 (365)
                                          .+.+.+..|++||+|+.+|+++|+.|+.   ++||+||+|+||+|+|++.+........ 
T Consensus       154 --------------------~~~~~~~~Y~asKaal~~l~~~la~el~---~~gI~Vn~v~PG~v~T~~~~~~~~~~~~~  210 (258)
T PRK07533        154 --------------------KVVENYNLMGPVKAALESSVRYLAAELG---PKGIRVHAISPGPLKTRAASGIDDFDALL  210 (258)
T ss_pred             --------------------cCCccchhhHHHHHHHHHHHHHHHHHhh---hcCcEEEEEecCCcCChhhhccCCcHHHH
Confidence                                6677888999999999999999999998   8899999999999999997654221111 


Q ss_pred             HHHHHHHHhcCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCcc
Q 017812          286 MAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRT  329 (365)
Q Consensus       286 ~~~~~~~~~~~~~~p~e~A~~i~~~~l~-~~~~~G~~~~~~~g~~  329 (365)
                      .......|++|+.+|+|+|..+++++.. +...+|+.+..++|..
T Consensus       211 ~~~~~~~p~~r~~~p~dva~~~~~L~s~~~~~itG~~i~vdgg~~  255 (258)
T PRK07533        211 EDAAERAPLRRLVDIDDVGAVAAFLASDAARRLTGNTLYIDGGYH  255 (258)
T ss_pred             HHHHhcCCcCCCCCHHHHHHHHHHHhChhhccccCcEEeeCCccc
Confidence            1122234677889999999999965432 1356899998888754

>PRK05867 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.3e-40  Score=295.39  Aligned_cols=241  Identities=20%  Similarity=0.277  Sum_probs=201.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.++++++.+++...  +.++..+.+|++|+++++++++++.+ 
T Consensus         6 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~-   82 (253)
T PRK05867          6 DLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTS--GGKVVPVCCDVSQHQQVTSMLDQVTA-   82 (253)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHH-
Confidence            478999999999999999999999999999999999999988888888665  35788999999999999999999988 


Q ss_pred             HhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                           .++++|+||||||+..  +..+.+.+++++++++|+.+++.++++++|.|.+++..|+||++||..+.       
T Consensus        83 -----~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~-------  150 (253)
T PRK05867         83 -----ELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGH-------  150 (253)
T ss_pred             -----HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhc-------
Confidence                 5688999999999863  34567889999999999999999999999999876545899999998765       


Q ss_pred             CCccccccccccCCC--CChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHH
Q 017812          214 NNETITGKFFLRSKC--YPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVL  291 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~  291 (365)
                                   .+  .+....|++||+|+++|++++++|+.   +.||+||+|+||+|+|++....+....  .....
T Consensus       151 -------------~~~~~~~~~~Y~asKaal~~~~~~la~e~~---~~gI~vn~i~PG~v~t~~~~~~~~~~~--~~~~~  212 (253)
T PRK05867        151 -------------IINVPQQVSHYCASKAAVIHLTKAMAVELA---PHKIRVNSVSPGYILTELVEPYTEYQP--LWEPK  212 (253)
T ss_pred             -------------CCCCCCCccchHHHHHHHHHHHHHHHHHHh---HhCeEEEEeecCCCCCcccccchHHHH--HHHhc
Confidence                         22  12357899999999999999999998   789999999999999999765543211  12223


Q ss_pred             HHhcCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCcc
Q 017812          292 KLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRT  329 (365)
Q Consensus       292 ~~~~~~~~p~e~A~~i~~~~l~-~~~~~G~~~~~~~g~~  329 (365)
                      .|++|+.+|+|+|+++++++.. +...+|+.+..|+|..
T Consensus       213 ~~~~r~~~p~~va~~~~~L~s~~~~~~tG~~i~vdgG~~  251 (253)
T PRK05867        213 IPLGRLGRPEELAGLYLYLASEASSYMTGSDIVIDGGYT  251 (253)
T ss_pred             CCCCCCcCHHHHHHHHHHHcCcccCCcCCCeEEECCCcc
Confidence            4678899999999999954432 2356899999898854

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=100.00  E-value=7.1e-40  Score=296.68  Aligned_cols=244  Identities=15%  Similarity=0.202  Sum_probs=202.2

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEec-CchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHH
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGR-SSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  133 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~  133 (365)
                      .++++|+++||||++|||+++|++|+++|++|++++| +.+++++..+++.... +.++.++++|++|+++++++++++.
T Consensus         4 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~   82 (260)
T PRK08416          4 NEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKY-GIKAKAYPLNILEPETYKELFKKID   82 (260)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhc-CCceEEEEcCCCCHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999875 5667777777776543 4578999999999999999999998


Q ss_pred             HHHhccCCCCCeeEEEecCCccc--------CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017812          134 QWLLDSDMHSSIQLLINNAGILA--------TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  205 (365)
Q Consensus       134 ~~~~~~~~~~~id~lv~nAG~~~--------~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~  205 (365)
                      +      .++++|+||||||+..        +..+.+.+++++.+++|+.+++.+++.++|.|++++ .|+||++||..+
T Consensus        83 ~------~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~  155 (260)
T PRK08416         83 E------DFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVG-GGSIISLSSTGN  155 (260)
T ss_pred             H------hcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccC-CEEEEEEecccc
Confidence            8      5688999999999742        334567899999999999999999999999998765 689999999887


Q ss_pred             cccccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHH-
Q 017812          206 RNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLS-  284 (365)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~-  284 (365)
                      .                    .+.+.+..|++||+|+++|+++|+.|+.   ++||+|++|+||+++|++.+..+.... 
T Consensus       156 ~--------------------~~~~~~~~Y~asK~a~~~~~~~la~el~---~~gi~v~~v~PG~i~T~~~~~~~~~~~~  212 (260)
T PRK08416        156 L--------------------VYIENYAGHGTSKAAVETMVKYAATELG---EKNIRVNAVSGGPIDTDALKAFTNYEEV  212 (260)
T ss_pred             c--------------------cCCCCcccchhhHHHHHHHHHHHHHHhh---hhCeEEEEEeeCcccChhhhhccCCHHH
Confidence            7                    6677888999999999999999999998   789999999999999998765432111 


Q ss_pred             HHHHHHHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017812          285 LMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  329 (365)
Q Consensus       285 ~~~~~~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~  329 (365)
                      ........|++|+.+|+|+|+.+++++... ...+|+.+..++|..
T Consensus       213 ~~~~~~~~~~~r~~~p~~va~~~~~l~~~~~~~~~G~~i~vdgg~~  258 (260)
T PRK08416        213 KAKTEELSPLNRMGQPEDLAGACLFLCSEKASWLTGQTIVVDGGTT  258 (260)
T ss_pred             HHHHHhcCCCCCCCCHHHHHHHHHHHcChhhhcccCcEEEEcCCee
Confidence            112222346778899999999999644322 246899998887753

>PRK07062 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-39  Score=296.16  Aligned_cols=244  Identities=24%  Similarity=0.285  Sum_probs=206.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      +++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.+++.++.++++|++|.++++++++++.+ 
T Consensus         5 ~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~-   83 (265)
T PRK07062          5 QLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEA-   83 (265)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHH-
Confidence            4789999999999999999999999999999999999999999888888776666889999999999999999999988 


Q ss_pred             HhccCCCCCeeEEEecCCcc--cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                           .++++|+||||||+.  .+..+.+.++|++.+++|+.+++.+++.++|.|++++ .|+||++||..+.       
T Consensus        84 -----~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~-------  150 (265)
T PRK07062         84 -----RFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASA-AASIVCVNSLLAL-------  150 (265)
T ss_pred             -----hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC-CcEEEEecccccc-------
Confidence                 668899999999985  3445778899999999999999999999999998875 6899999999987       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh--------HHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS--------FLSL  285 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~--------~~~~  285 (365)
                                   .+.+....|+++|+|+.+|+++++.|+.   +.||+|++|+||+|+|++......        ....
T Consensus       151 -------------~~~~~~~~y~asKaal~~~~~~la~e~~---~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~  214 (265)
T PRK07062        151 -------------QPEPHMVATSAARAGLLNLVKSLATELA---PKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAW  214 (265)
T ss_pred             -------------CCCCCchHhHHHHHHHHHHHHHHHHHhh---hcCeEEEEEecCccccchhhhHHHHhhccCCChHHH
Confidence                         6777888999999999999999999998   789999999999999998643211        0111


Q ss_pred             HHH---HHHHHhcCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCcc
Q 017812          286 MAF---TVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRT  329 (365)
Q Consensus       286 ~~~---~~~~~~~~~~~p~e~A~~i~~~~l~-~~~~~G~~~~~~~g~~  329 (365)
                      ...   ....|++|+.+|+|+|+.+++++.. +...+|+.+..++|.-
T Consensus       215 ~~~~~~~~~~p~~r~~~p~~va~~~~~L~s~~~~~~tG~~i~vdgg~~  262 (265)
T PRK07062        215 TAALARKKGIPLGRLGRPDEAARALFFLASPLSSYTTGSHIDVSGGFA  262 (265)
T ss_pred             HHHHhhcCCCCcCCCCCHHHHHHHHHHHhCchhcccccceEEEcCceE
Confidence            000   1123677899999999999964432 2356899998888743

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=100.00  E-value=6.4e-39  Score=299.32  Aligned_cols=289  Identities=26%  Similarity=0.390  Sum_probs=219.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.++++++.+++...  +.++.++++|++|.++++++++++.+ 
T Consensus         3 ~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~-   79 (322)
T PRK07453          3 QDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIP--PDSYTIIHIDLGDLDSVRRFVDDFRA-   79 (322)
T ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcc--CCceEEEEecCCCHHHHHHHHHHHHH-
Confidence            357899999999999999999999999999999999999988888887532  45788999999999999999998776 


Q ss_pred             HhccCCCCCeeEEEecCCcccCC---CCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCC-CCeEEEEcCCcccccc-c
Q 017812          136 LLDSDMHSSIQLLINNAGILATS---SRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPV-PSRIVNVTSFTHRNVF-N  210 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~~~---~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~-~g~iV~vsS~~~~~~~-~  210 (365)
                           ..+++|+||||||+..+.   .+.+.++++.++++|+.|++++++.++|.|++++. .+|||++||.++.... .
T Consensus        80 -----~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~  154 (322)
T PRK07453         80 -----LGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELG  154 (322)
T ss_pred             -----hCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccC
Confidence                 557899999999986432   35688999999999999999999999999987652 2699999998875321 0


Q ss_pred             cc------CCCccccc--cc------cccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcc-cCCc
Q 017812          211 AQ------VNNETITG--KF------FLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVV-KTNI  275 (365)
Q Consensus       211 ~~------~~~~~~~~--~~------~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v-~T~~  275 (365)
                      ..      .+.++...  ..      .....++.+..+|+.||++++.+++.+++++.  ...||++++++||+| .|++
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~--~~~gi~v~~v~PG~v~~t~~  232 (322)
T PRK07453        155 GKIPIPAPADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYH--ESTGITFSSLYPGCVADTPL  232 (322)
T ss_pred             CccCCCCccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhc--ccCCeEEEEecCCcccCCcc
Confidence            00      01110000  00      00113455678999999999999999999985  146999999999999 6998


Q ss_pred             cccchhHHHHHHH-HHHHHhcCCCCHHHHHHHHHHHhcCCC-CCcccEEeCCCCc-------cccCCcccCCHHHHHHHH
Q 017812          276 MREVPSFLSLMAF-TVLKLLGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKGR-------TVNSSALSFNSKLAGELW  346 (365)
Q Consensus       276 ~~~~~~~~~~~~~-~~~~~~~~~~~p~e~A~~i~~~~l~~~-~~~G~~~~~~~g~-------~~~~~~~~~d~~~~~~lw  346 (365)
                      .++.+........ ..........++++.|+.++++++.++ ..+|.||..++..       +..++..+.|++.+++||
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~~~~~~~~~~~~~~~~~~~~a~d~~~~~~lw  312 (322)
T PRK07453        233 FRNTPPLFQKLFPWFQKNITGGYVSQELAGERVAQVVADPEFAQSGVHWSWGNRQKKDRKAFSQELSDRATDDDKARRLW  312 (322)
T ss_pred             cccCCHHHHHHHHHHHHHHhhceecHHHHhhHHHHhhcCcccCCCCceeecCCCCCcCccccccccchhhcCHHHHHHHH
Confidence            8765442211111 111112234689999999998887765 4578888632211       135677889999999999


Q ss_pred             HHHHHhhh
Q 017812          347 TTSCNLFI  354 (365)
Q Consensus       347 ~~~~~~~~  354 (365)
                      +.++++++
T Consensus       313 ~~s~~~~~  320 (322)
T PRK07453        313 DLSAKLVG  320 (322)
T ss_pred             HHHHHHhC
Confidence            99999876

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=8.3e-40  Score=295.55  Aligned_cols=238  Identities=13%  Similarity=0.107  Sum_probs=193.0

Q ss_pred             CCCCCEEEEecCC--ChHHHHHHHHHHHCCCEEEEEecCc---hhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHH
Q 017812           56 GIKRPVCIVTGAT--SGLGAAAAYALSREGFHVVLVGRSS---HLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKD  130 (365)
Q Consensus        56 ~~~~k~vlITGas--sGIG~~~a~~la~~G~~Vil~~r~~---~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~  130 (365)
                      +++||+++||||+  +|||+++|++|+++|++|++++|+.   +.++++.+++    .+.++..+++|++|+++++++++
T Consensus         4 ~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~Dv~d~~~v~~~~~   79 (257)
T PRK08594          4 SLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTL----EGQESLLLPCDVTSDEEITACFE   79 (257)
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHc----CCCceEEEecCCCCHHHHHHHHH
Confidence            4679999999997  8999999999999999999998764   3344433333    23578899999999999999999


Q ss_pred             HHHHHHhccCCCCCeeEEEecCCccc------CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017812          131 SLQQWLLDSDMHSSIQLLINNAGILA------TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  204 (365)
Q Consensus       131 ~~~~~~~~~~~~~~id~lv~nAG~~~------~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~  204 (365)
                      ++.+      .++++|++|||||+..      +..+.+.++|++.+++|+.+++++++.++|+|.+   .|+||++||.+
T Consensus        80 ~~~~------~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~g~Iv~isS~~  150 (257)
T PRK08594         80 TIKE------EVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTE---GGSIVTLTYLG  150 (257)
T ss_pred             HHHH------hCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhccc---CceEEEEcccC
Confidence            9988      6689999999999753      3346788999999999999999999999999964   48999999999


Q ss_pred             ccccccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHH
Q 017812          205 HRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLS  284 (365)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~  284 (365)
                      +.                    .+.+.+.+|++||+|+++|+++++.|++   ++||+||+|+||+++|++.+..+....
T Consensus       151 ~~--------------------~~~~~~~~Y~asKaal~~l~~~la~el~---~~gIrvn~v~PG~v~T~~~~~~~~~~~  207 (257)
T PRK08594        151 GE--------------------RVVQNYNVMGVAKASLEASVKYLANDLG---KDGIRVNAISAGPIRTLSAKGVGGFNS  207 (257)
T ss_pred             Cc--------------------cCCCCCchhHHHHHHHHHHHHHHHHHhh---hcCCEEeeeecCcccCHhHhhhccccH
Confidence            87                    6777888999999999999999999998   789999999999999997653321111


Q ss_pred             -HHHHHHHHHhcCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCcc
Q 017812          285 -LMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRT  329 (365)
Q Consensus       285 -~~~~~~~~~~~~~~~p~e~A~~i~~~~l~-~~~~~G~~~~~~~g~~  329 (365)
                       ........|++|+.+|+|+|+.+++++.. +...+|+.+..++|..
T Consensus       208 ~~~~~~~~~p~~r~~~p~~va~~~~~l~s~~~~~~tG~~~~~dgg~~  254 (257)
T PRK08594        208 ILKEIEERAPLRRTTTQEEVGDTAAFLFSDLSRGVTGENIHVDSGYH  254 (257)
T ss_pred             HHHHHhhcCCccccCCHHHHHHHHHHHcCcccccccceEEEECCchh
Confidence             11112223667889999999999954432 2356899988887753

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.3e-39  Score=294.71  Aligned_cols=239  Identities=15%  Similarity=0.165  Sum_probs=194.7

Q ss_pred             CCCCEEEEecCCC--hHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATS--GLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        57 ~~~k~vlITGass--GIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      ++||+++||||++  |||+++|++|+++|++|++++|+ +++++..+++....  ..+.+++||++|+++++++++++.+
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~-~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN-DKLKGRVEEFAAQL--GSDIVLPCDVAEDASIDAMFAELGK   80 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecc-hhHHHHHHHHHhcc--CCceEeecCCCCHHHHHHHHHHHHh
Confidence            6799999999986  99999999999999999999998 45555666665543  2467889999999999999999987


Q ss_pred             HHhccCCCCCeeEEEecCCcccC-------CCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccc
Q 017812          135 WLLDSDMHSSIQLLINNAGILAT-------SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRN  207 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~~-------~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~  207 (365)
                            .++++|+||||||+...       ..+.+.++|++++++|+.|++.+++.+.|+|.+   .|+||++||.++. 
T Consensus        81 ------~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~g~Iv~iss~~~~-  150 (262)
T PRK07984         81 ------VWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP---GSALLTLSYLGAE-  150 (262)
T ss_pred             ------hcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcC---CcEEEEEecCCCC-
Confidence                  67899999999998532       235678999999999999999999999997643   4899999998877 


Q ss_pred             cccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHH-H
Q 017812          208 VFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSL-M  286 (365)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~-~  286 (365)
                                         .+.+.+.+|++||+|+++|+++++.|++   +.||+||+|+||+|+|++....+..... .
T Consensus       151 -------------------~~~~~~~~Y~asKaal~~l~~~la~el~---~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~  208 (262)
T PRK07984        151 -------------------RAIPNYNVMGLAKASLEANVRYMANAMG---PEGVRVNAISAGPIRTLAASGIKDFRKMLA  208 (262)
T ss_pred             -------------------CCCCCcchhHHHHHHHHHHHHHHHHHhc---ccCcEEeeeecCcccchHHhcCCchHHHHH
Confidence                               6777888999999999999999999998   8899999999999999876543321111 1


Q ss_pred             HHHHHHHhcCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCccc
Q 017812          287 AFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTV  330 (365)
Q Consensus       287 ~~~~~~~~~~~~~p~e~A~~i~~~~l~-~~~~~G~~~~~~~g~~~  330 (365)
                      ......|++++.+|+|+|+.+++++.. +...+|+.+..++|..+
T Consensus       209 ~~~~~~p~~r~~~pedva~~~~~L~s~~~~~itG~~i~vdgg~~~  253 (262)
T PRK07984        209 HCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFSI  253 (262)
T ss_pred             HHHHcCCCcCCCCHHHHHHHHHHHcCcccccccCcEEEECCCccc
Confidence            112234678899999999999954432 13568999998888654

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.5e-39  Score=296.17  Aligned_cols=239  Identities=14%  Similarity=0.153  Sum_probs=193.6

Q ss_pred             CCCCEEEEecCC--ChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           57 IKRPVCIVTGAT--SGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        57 ~~~k~vlITGas--sGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      +++|+++||||+  +|||+++|++|+++|++|++++|+.. ..+..+++.+.. + ....+++|++|+++++++++++.+
T Consensus         8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~-~~~~~~~l~~~~-~-~~~~~~~Dl~~~~~v~~~~~~~~~   84 (272)
T PRK08159          8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDA-LKKRVEPLAAEL-G-AFVAGHCDVTDEASIDAVFETLEK   84 (272)
T ss_pred             ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchH-HHHHHHHHHHhc-C-CceEEecCCCCHHHHHHHHHHHHH
Confidence            578999999997  89999999999999999999998742 233334443332 2 356789999999999999999987


Q ss_pred             HHhccCCCCCeeEEEecCCccc------CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccc
Q 017812          135 WLLDSDMHSSIQLLINNAGILA------TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNV  208 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~------~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~  208 (365)
                            .++++|+||||||+..      +..+.+.++|++.+++|+.|++++++.++|+|.+   .|+||++||.++.  
T Consensus        85 ------~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~---~g~Iv~iss~~~~--  153 (272)
T PRK08159         85 ------KWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTD---GGSILTLTYYGAE--  153 (272)
T ss_pred             ------hcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCC---CceEEEEeccccc--
Confidence                  6689999999999863      3456789999999999999999999999999964   4899999998876  


Q ss_pred             ccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHH
Q 017812          209 FNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAF  288 (365)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~  288 (365)
                                        .+.+.+..|++||+|+.+|+++|+.|+.   +.||+||+|+||+++|++....+........
T Consensus       154 ------------------~~~p~~~~Y~asKaal~~l~~~la~el~---~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~  212 (272)
T PRK08159        154 ------------------KVMPHYNVMGVAKAALEASVKYLAVDLG---PKNIRVNAISAGPIKTLAASGIGDFRYILKW  212 (272)
T ss_pred             ------------------cCCCcchhhhhHHHHHHHHHHHHHHHhc---ccCeEEEEeecCCcCCHHHhcCCcchHHHHH
Confidence                              6778889999999999999999999998   8899999999999999886543321111111


Q ss_pred             -HHHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017812          289 -TVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  330 (365)
Q Consensus       289 -~~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~  330 (365)
                       ....|++|+.+|||+|+.+++++... ...+|+.+..++|...
T Consensus       213 ~~~~~p~~r~~~peevA~~~~~L~s~~~~~itG~~i~vdgG~~~  256 (272)
T PRK08159        213 NEYNAPLRRTVTIEEVGDSALYLLSDLSRGVTGEVHHVDSGYHV  256 (272)
T ss_pred             HHhCCcccccCCHHHHHHHHHHHhCccccCccceEEEECCCcee
Confidence             11246778899999999999654322 3568999999998654

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=100.00  E-value=1.9e-39  Score=292.44  Aligned_cols=244  Identities=30%  Similarity=0.381  Sum_probs=202.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcC-CCceEEEEecCCChhhHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNK-DARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      .+.||+++||||++|||+++|++|++.|++|++++|+++++++..+++..... +.++..+.||+++.+++++++++..+
T Consensus         5 ~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~   84 (270)
T KOG0725|consen    5 RLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVE   84 (270)
T ss_pred             cCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999999999999998877543 46799999999999999999999888


Q ss_pred             HHhccCCCCCeeEEEecCCccc---CCCCCCHHHHhHhHHHHhHH-HHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc
Q 017812          135 WLLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIG-AFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN  210 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~---~~~~~~~~~~~~~~~vN~~~-~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~  210 (365)
                      .     .+++||+||||||...   +..+.+++.|++++++|+.| .+.+.+.+.|++.+++ .|.|+++||.++.    
T Consensus        85 ~-----~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~-gg~I~~~ss~~~~----  154 (270)
T KOG0725|consen   85 K-----FFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSK-GGSIVNISSVAGV----  154 (270)
T ss_pred             H-----hCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcC-CceEEEEeccccc----
Confidence            3     2689999999999874   45688999999999999995 6666677777777655 7999999999887    


Q ss_pred             ccCCCccccccccccCCCCChh-hhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccc-cchhH--HHHH
Q 017812          211 AQVNNETITGKFFLRSKCYPCA-RIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMR-EVPSF--LSLM  286 (365)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~-~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~-~~~~~--~~~~  286 (365)
                                      .+.++. .+|++||+|+++|+|++|.|+.   +.|||||+|+||.+.|++.. ..+..  ....
T Consensus       155 ----------------~~~~~~~~~Y~~sK~al~~ltr~lA~El~---~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~  215 (270)
T KOG0725|consen  155 ----------------GPGPGSGVAYGVSKAALLQLTRSLAKELA---KHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFK  215 (270)
T ss_pred             ----------------cCCCCCcccchhHHHHHHHHHHHHHHHHh---hcCcEEEEeecCcEeCCccccccccchhhHHh
Confidence                            444444 7999999999999999999998   89999999999999999821 11110  1111


Q ss_pred             H---HHHHHHhcCCCCHHHHHHHHHHHhcCCC---CCcccEEeCCCCccc
Q 017812          287 A---FTVLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRTV  330 (365)
Q Consensus       287 ~---~~~~~~~~~~~~p~e~A~~i~~~~l~~~---~~~G~~~~~~~g~~~  330 (365)
                      .   .....|++|+.+|+|+|..+.  ||+++   ..+|+.+..|+|...
T Consensus       216 ~~~~~~~~~p~gr~g~~~eva~~~~--fla~~~asyitG~~i~vdgG~~~  263 (270)
T KOG0725|consen  216 EATDSKGAVPLGRVGTPEEVAEAAA--FLASDDASYITGQTIIVDGGFTV  263 (270)
T ss_pred             hhhccccccccCCccCHHHHHHhHH--hhcCcccccccCCEEEEeCCEEe
Confidence            1   223457899999999999999  66655   567888888888765

>PRK07478 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-39  Score=292.12  Aligned_cols=244  Identities=23%  Similarity=0.304  Sum_probs=203.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      ++++|+++||||++|||+++|++|+++|++|++++|++++++++.+++...  +.++.++.+|++|+++++++++++.+ 
T Consensus         3 ~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~-   79 (254)
T PRK07478          3 RLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAE--GGEAVALAGDVRDEAYAKALVALAVE-   79 (254)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHH-
Confidence            467899999999999999999999999999999999999998888888665  35788999999999999999999988 


Q ss_pred             HhccCCCCCeeEEEecCCccc---CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017812          136 LLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~  212 (365)
                           .++++|+||||||+..   +..+.+.+++++++++|+.+++.+++.++|.|++++ .++||++||.++.      
T Consensus        80 -----~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~-~~~iv~~sS~~~~------  147 (254)
T PRK07478         80 -----RFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARG-GGSLIFTSTFVGH------  147 (254)
T ss_pred             -----hcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEechHhh------
Confidence                 5688999999999853   345678899999999999999999999999998775 6899999998775      


Q ss_pred             CCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHH-HHHHHH
Q 017812          213 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSL-MAFTVL  291 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~-~~~~~~  291 (365)
                                   ..+.++...|++||+|++++++++++|+.   +.||+|++|+||+++|++.+........ ......
T Consensus       148 -------------~~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~  211 (254)
T PRK07478        148 -------------TAGFPGMAAYAASKAGLIGLTQVLAAEYG---AQGIRVNALLPGGTDTPMGRAMGDTPEALAFVAGL  211 (254)
T ss_pred             -------------ccCCCCcchhHHHHHHHHHHHHHHHHHHh---hcCEEEEEEeeCcccCcccccccCCHHHHHHHHhc
Confidence                         03556788999999999999999999998   7899999999999999987654321111 111222


Q ss_pred             HHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017812          292 KLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  330 (365)
Q Consensus       292 ~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~  330 (365)
                      .+++++.+|+|+|+.+++++... ...+|+.+..++|...
T Consensus       212 ~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~~dgg~~~  251 (254)
T PRK07478        212 HALKRMAQPEEIAQAALFLASDAASFVTGTALLVDGGVSI  251 (254)
T ss_pred             CCCCCCcCHHHHHHHHHHHcCchhcCCCCCeEEeCCchhc
Confidence            35678889999999999655322 3568998888887543

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=100.00  E-value=2e-39  Score=297.31  Aligned_cols=242  Identities=14%  Similarity=0.142  Sum_probs=194.3

Q ss_pred             CCCCCEEEEecC--CChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhc-------C-C---CceEEEEecC--C
Q 017812           56 GIKRPVCIVTGA--TSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRN-------K-D---ARLEAFQVDL--S  120 (365)
Q Consensus        56 ~~~~k~vlITGa--ssGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~-------~-~---~~~~~~~~Dl--s  120 (365)
                      +++||++|||||  |+|||+++|+.|+++|++|++ +|+.++++++..++.+..       + +   .....+.+|+  +
T Consensus         6 ~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   84 (303)
T PLN02730          6 DLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFD   84 (303)
T ss_pred             CCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecC
Confidence            488999999999  899999999999999999999 899999988887775321       1 1   1246788999  4


Q ss_pred             Ch------------------hhHHHHHHHHHHHHhccCCCCCeeEEEecCCcc----cCCCCCCHHHHhHhHHHHhHHHH
Q 017812          121 SF------------------QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL----ATSSRLTPEGYDQMMSTNYIGAF  178 (365)
Q Consensus       121 ~~------------------~~v~~~~~~~~~~~~~~~~~~~id~lv~nAG~~----~~~~~~~~~~~~~~~~vN~~~~~  178 (365)
                      ++                  ++++++++++.+      .++++|+||||||+.    .+..+.+.++|++++++|+.|++
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~------~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~  158 (303)
T PLN02730         85 TPEDVPEDVKTNKRYAGSSNWTVQEVAESVKA------DFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFV  158 (303)
T ss_pred             ccccCchhhhcccccccCCHHHHHHHHHHHHH------HcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHH
Confidence            43                  489999999988      678999999999753    45567899999999999999999


Q ss_pred             HHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCccccccccccCCCCChh-hhhhhhHHHHHHHHHHHHHHhCCCC
Q 017812          179 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCA-RIYEYSKLCLLIFSYELHRNLGLDK  257 (365)
Q Consensus       179 ~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~sK~a~~~~~~~la~e~~~~~  257 (365)
                      +++++++|.|++   .|+||++||.++.                    .+.+++ ..|++||+|+++|+++|+.|++   
T Consensus       159 ~l~~~~~p~m~~---~G~II~isS~a~~--------------------~~~p~~~~~Y~asKaAl~~l~~~la~El~---  212 (303)
T PLN02730        159 SLLQHFGPIMNP---GGASISLTYIASE--------------------RIIPGYGGGMSSAKAALESDTRVLAFEAG---  212 (303)
T ss_pred             HHHHHHHHHHhc---CCEEEEEechhhc--------------------CCCCCCchhhHHHHHHHHHHHHHHHHHhC---
Confidence            999999999976   3899999999887                    566654 5899999999999999999997   


Q ss_pred             C-CCeEEEEecCCcccCCccccchhHHHHHH-HHHHHHhcCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCccc
Q 017812          258 S-RHVSVIAADPGVVKTNIMREVPSFLSLMA-FTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTV  330 (365)
Q Consensus       258 ~-~gi~v~~v~PG~v~T~~~~~~~~~~~~~~-~~~~~~~~~~~~p~e~A~~i~~~~l~-~~~~~G~~~~~~~g~~~  330 (365)
                      + +||+||+|+||+|+|++.+..+....... .....|++|+.+|+|+|..+++++.. +...+|+.+..++|...
T Consensus       213 ~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~r~~~peevA~~~~fLaS~~a~~itG~~l~vdGG~~~  288 (303)
T PLN02730        213 RKYKIRVNTISAGPLGSRAAKAIGFIDDMIEYSYANAPLQKELTADEVGNAAAFLASPLASAITGATIYVDNGLNA  288 (303)
T ss_pred             cCCCeEEEEEeeCCccCchhhcccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCEEEECCCccc
Confidence            5 79999999999999999865322111111 11223567889999999999954432 12558998888877544

>PRK06114 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.9e-39  Score=290.83  Aligned_cols=247  Identities=20%  Similarity=0.215  Sum_probs=201.2

Q ss_pred             CCCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCch-hHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHH
Q 017812           53 PITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH-LLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDS  131 (365)
Q Consensus        53 ~~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~  131 (365)
                      .+.++++|+++||||++|||+++|++|+++|++|++++|+.+ .+++..+++...  +.++.++++|++|++++++++++
T Consensus         2 ~~~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~i~~~~~~   79 (254)
T PRK06114          2 QLFDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAA--GRRAIQIAADVTSKADLRAAVAR   79 (254)
T ss_pred             CccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHH
Confidence            344688999999999999999999999999999999999864 456676777654  45788999999999999999999


Q ss_pred             HHHHHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccc
Q 017812          132 LQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVF  209 (365)
Q Consensus       132 ~~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~  209 (365)
                      +.+      .++++|++|||||+..  +..+.+.+++++++++|+.++++++++++|.|.+++ .|+||++||.++... 
T Consensus        80 ~~~------~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~-  151 (254)
T PRK06114         80 TEA------ELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENG-GGSIVNIASMSGIIV-  151 (254)
T ss_pred             HHH------HcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC-CcEEEEECchhhcCC-
Confidence            988      5689999999999863  345678999999999999999999999999998765 689999999987611 


Q ss_pred             cccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHH
Q 017812          210 NAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFT  289 (365)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~  289 (365)
                                       .+.+....|++||+|+++++++++.|+.   +.||+||+|+||+++|++..............
T Consensus       152 -----------------~~~~~~~~Y~~sKaa~~~l~~~la~e~~---~~gi~v~~v~PG~i~t~~~~~~~~~~~~~~~~  211 (254)
T PRK06114        152 -----------------NRGLLQAHYNASKAGVIHLSKSLAMEWV---GRGIRVNSISPGYTATPMNTRPEMVHQTKLFE  211 (254)
T ss_pred             -----------------CCCCCcchHHHHHHHHHHHHHHHHHHHh---hcCeEEEEEeecCccCcccccccchHHHHHHH
Confidence                             1122367899999999999999999998   88999999999999999875321111111223


Q ss_pred             HHHHhcCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCcc
Q 017812          290 VLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRT  329 (365)
Q Consensus       290 ~~~~~~~~~~p~e~A~~i~~~~l~-~~~~~G~~~~~~~g~~  329 (365)
                      ...|++|+.+|+|+|+.+++++.. +...+|+.+..++|..
T Consensus       212 ~~~p~~r~~~~~dva~~~~~l~s~~~~~~tG~~i~~dgg~~  252 (254)
T PRK06114        212 EQTPMQRMAKVDEMVGPAVFLLSDAASFCTGVDLLVDGGFV  252 (254)
T ss_pred             hcCCCCCCcCHHHHHHHHHHHcCccccCcCCceEEECcCEe
Confidence            345788999999999999954422 1356899998888754

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3e-39  Score=292.46  Aligned_cols=240  Identities=15%  Similarity=0.140  Sum_probs=190.9

Q ss_pred             CCCCEEEEecC--CChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           57 IKRPVCIVTGA--TSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        57 ~~~k~vlITGa--ssGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      +++|+++||||  ++|||+++|++|+++|++|++++|.. +.++..+++.+..+  ....+++|++|+++++++++++.+
T Consensus         4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~   80 (260)
T PRK06997          4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGD-RFKDRITEFAAEFG--SDLVFPCDVASDEQIDALFASLGQ   80 (260)
T ss_pred             cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccch-HHHHHHHHHHHhcC--CcceeeccCCCHHHHHHHHHHHHH
Confidence            67899999996  68999999999999999999987652 22223333333322  235789999999999999999988


Q ss_pred             HHhccCCCCCeeEEEecCCcccC-------CCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccc
Q 017812          135 WLLDSDMHSSIQLLINNAGILAT-------SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRN  207 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~~-------~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~  207 (365)
                            .++++|+||||||+..+       ..+.+.++|++.+++|+.|+++++++++|+|.+   .|+||++||.++. 
T Consensus        81 ------~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~---~g~Ii~iss~~~~-  150 (260)
T PRK06997         81 ------HWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSD---DASLLTLSYLGAE-  150 (260)
T ss_pred             ------HhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCC---CceEEEEeccccc-
Confidence                  56899999999998632       134678999999999999999999999999943   4899999999887 


Q ss_pred             cccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHH-
Q 017812          208 VFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLM-  286 (365)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~-  286 (365)
                                         .+.+.+.+|++||+|+.+|+++|++|++   ++||+||+|+||+|+|++........... 
T Consensus       151 -------------------~~~~~~~~Y~asKaal~~l~~~la~el~---~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~  208 (260)
T PRK06997        151 -------------------RVVPNYNTMGLAKASLEASVRYLAVSLG---PKGIRANGISAGPIKTLAASGIKDFGKILD  208 (260)
T ss_pred             -------------------cCCCCcchHHHHHHHHHHHHHHHHHHhc---ccCeEEEEEeeCccccchhccccchhhHHH
Confidence                               6777888999999999999999999998   88999999999999998765432111111 


Q ss_pred             HHHHHHHhcCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCcccc
Q 017812          287 AFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTVN  331 (365)
Q Consensus       287 ~~~~~~~~~~~~~p~e~A~~i~~~~l~-~~~~~G~~~~~~~g~~~~  331 (365)
                      ......|++|+.+|+|+|+.+++++.. +...+|+.+..|+|...-
T Consensus       209 ~~~~~~p~~r~~~pedva~~~~~l~s~~~~~itG~~i~vdgg~~~~  254 (260)
T PRK06997        209 FVESNAPLRRNVTIEEVGNVAAFLLSDLASGVTGEITHVDSGFNAV  254 (260)
T ss_pred             HHHhcCcccccCCHHHHHHHHHHHhCccccCcceeEEEEcCChhhc
Confidence            112223678899999999999954433 236789999988886553

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=4.8e-39  Score=290.49  Aligned_cols=237  Identities=19%  Similarity=0.234  Sum_probs=189.9

Q ss_pred             CCCCCEEEEecC--CChHHHHHHHHHHHCCCEEEEEecCc--hhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHH
Q 017812           56 GIKRPVCIVTGA--TSGLGAAAAYALSREGFHVVLVGRSS--HLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDS  131 (365)
Q Consensus        56 ~~~~k~vlITGa--ssGIG~~~a~~la~~G~~Vil~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~  131 (365)
                      ++++|+++||||  ++|||+++|++|+++|++|++++|+.  +.++++.+++     +.++.++++|++|++++++++++
T Consensus         4 ~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~i~~~~~~   78 (256)
T PRK07889          4 LLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRL-----PEPAPVLELDVTNEEHLASLADR   78 (256)
T ss_pred             cccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhc-----CCCCcEEeCCCCCHHHHHHHHHH
Confidence            367999999999  89999999999999999999999864  3344444433     23577899999999999999999


Q ss_pred             HHHHHhccCCCCCeeEEEecCCccc------CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017812          132 LQQWLLDSDMHSSIQLLINNAGILA------TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  205 (365)
Q Consensus       132 ~~~~~~~~~~~~~id~lv~nAG~~~------~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~  205 (365)
                      +.+      .++++|+||||||+..      +..+.+.+++++++++|+.+++++++.++|+|++   .|+||++||.. 
T Consensus        79 ~~~------~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~---~g~Iv~is~~~-  148 (256)
T PRK07889         79 VRE------HVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNE---GGSIVGLDFDA-  148 (256)
T ss_pred             HHH------HcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhccc---CceEEEEeecc-
Confidence            987      5689999999999863      2345678999999999999999999999999974   47999998753 


Q ss_pred             cccccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHH
Q 017812          206 RNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSL  285 (365)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~  285 (365)
                      .                    .+.+.+..|++||+|+++|+++|+.|++   ++||+||+|+||+++|++.+..+.....
T Consensus       149 ~--------------------~~~~~~~~Y~asKaal~~l~~~la~el~---~~gIrvn~v~PG~v~T~~~~~~~~~~~~  205 (256)
T PRK07889        149 T--------------------VAWPAYDWMGVAKAALESTNRYLARDLG---PRGIRVNLVAAGPIRTLAAKAIPGFELL  205 (256)
T ss_pred             c--------------------ccCCccchhHHHHHHHHHHHHHHHHHhh---hcCeEEEeeccCcccChhhhcccCcHHH
Confidence            2                    3456778899999999999999999998   8899999999999999987654321111


Q ss_pred             -HHHHHHHHhc-CCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017812          286 -MAFTVLKLLG-LLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  330 (365)
Q Consensus       286 -~~~~~~~~~~-~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~  330 (365)
                       .......|++ ++.+|+|+|+.+++++... ...+|+++..++|...
T Consensus       206 ~~~~~~~~p~~~~~~~p~evA~~v~~l~s~~~~~~tG~~i~vdgg~~~  253 (256)
T PRK07889        206 EEGWDERAPLGWDVKDPTPVARAVVALLSDWFPATTGEIVHVDGGAHA  253 (256)
T ss_pred             HHHHHhcCccccccCCHHHHHHHHHHHhCcccccccceEEEEcCceec
Confidence             1112223566 5789999999999644322 2568999988887543

>PRK08265 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-38  Score=287.01  Aligned_cols=240  Identities=20%  Similarity=0.227  Sum_probs=200.3

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.++++++.+++     +.++.++++|++|++++.++++++.+
T Consensus         2 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~~~   76 (261)
T PRK08265          2 IGLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL-----GERARFIATDITDDAAIERAVATVVA   76 (261)
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCeeEEEEecCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999988777776665     34688999999999999999999988


Q ss_pred             HHhccCCCCCeeEEEecCCcccC-CCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          135 WLLDSDMHSSIQLLINNAGILAT-SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~~-~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                            .++++|+||||||+... ..+.+.+++++++++|+.+++.+++.++|.|+ ++ .|+||++||.++.       
T Consensus        77 ------~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~-~g~ii~isS~~~~-------  141 (261)
T PRK08265         77 ------RFGRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLA-RG-GGAIVNFTSISAK-------  141 (261)
T ss_pred             ------HhCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHh-cC-CcEEEEECchhhc-------
Confidence                  56889999999998532 23568899999999999999999999999997 33 5899999999887       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHH-HHHH--HH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLS-LMAF--TV  290 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~-~~~~--~~  290 (365)
                                   .+.++...|++||++++.++++++.|+.   +.||+||+|+||+++|++......... ....  ..
T Consensus       142 -------------~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gi~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~~~  205 (261)
T PRK08265        142 -------------FAQTGRWLYPASKAAIRQLTRSMAMDLA---PDGIRVNSVSPGWTWSRVMDELSGGDRAKADRVAAP  205 (261)
T ss_pred             -------------cCCCCCchhHHHHHHHHHHHHHHHHHhc---ccCEEEEEEccCCccChhhhhhcccchhHHHHhhcc
Confidence                         6777888999999999999999999998   789999999999999998764322111 1111  11


Q ss_pred             HHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017812          291 LKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  330 (365)
Q Consensus       291 ~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~  330 (365)
                      ..|++|+.+|+|+|+.+++++... ...+|+.+..++|...
T Consensus       206 ~~p~~r~~~p~dva~~~~~l~s~~~~~~tG~~i~vdgg~~~  246 (261)
T PRK08265        206 FHLLGRVGDPEEVAQVVAFLCSDAASFVTGADYAVDGGYSA  246 (261)
T ss_pred             cCCCCCccCHHHHHHHHHHHcCccccCccCcEEEECCCeec
Confidence            246788999999999999654321 3568999998988654

>PRK12747 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.4e-38  Score=282.99  Aligned_cols=244  Identities=27%  Similarity=0.336  Sum_probs=196.0

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEe-cCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVG-RSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      +++|+++||||++|||+++|++|++.|++|++++ |+.+++++...++...  +.++..+++|+++.+++..+++++.+.
T Consensus         2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (252)
T PRK12747          2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSN--GGSAFSIGANLESLHGVEALYSSLDNE   79 (252)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhc--CCceEEEecccCCHHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999875 6667777777777654  446788999999999999999988764


Q ss_pred             HhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                      +.+....+++|+||||||+..  +..+.+.++|++++++|+.|+++++++++|.|++   .|+||++||.++.       
T Consensus        80 ~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~---~g~iv~isS~~~~-------  149 (252)
T PRK12747         80 LQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD---NSRIINISSAATR-------  149 (252)
T ss_pred             hhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhc---CCeEEEECCcccc-------
Confidence            322111238999999999753  3456788999999999999999999999999975   3799999999987       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHH-HHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAF-TVLK  292 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~-~~~~  292 (365)
                                   .+.++..+|++||+|+++++++++.|+.   ++||+||+|+||+|+|++.+........... ....
T Consensus       150 -------------~~~~~~~~Y~~sKaa~~~~~~~la~e~~---~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~  213 (252)
T PRK12747        150 -------------ISLPDFIAYSMTKGAINTMTFTLAKQLG---ARGITVNAILPGFIKTDMNAELLSDPMMKQYATTIS  213 (252)
T ss_pred             -------------cCCCCchhHHHHHHHHHHHHHHHHHHHh---HcCCEEEEEecCCccCchhhhcccCHHHHHHHHhcC
Confidence                         6777888999999999999999999998   8899999999999999987643211111111 1122


Q ss_pred             HhcCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCc
Q 017812          293 LLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGR  328 (365)
Q Consensus       293 ~~~~~~~p~e~A~~i~~~~l~-~~~~~G~~~~~~~g~  328 (365)
                      +++++.+|+|+|+.+++++.. +...+|+.+..++|.
T Consensus       214 ~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgg~  250 (252)
T PRK12747        214 AFNRLGEVEDIADTAAFLASPDSRWVTGQLIDVSGGS  250 (252)
T ss_pred             cccCCCCHHHHHHHHHHHcCccccCcCCcEEEecCCc
Confidence            567889999999999954332 124679998888774

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=100.00  E-value=5.8e-38  Score=283.01  Aligned_cols=240  Identities=19%  Similarity=0.256  Sum_probs=197.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      +++||+++||||++|||+++|++|+++|++|++++++..  ++..+++...  +.++..+++|++|.++++++++++.+ 
T Consensus         7 ~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~--~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~-   81 (253)
T PRK08993          7 SLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEP--TETIEQVTAL--GRRFLSLTADLRKIDGIPALLERAVA-   81 (253)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcch--HHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHH-
Confidence            578999999999999999999999999999999887643  3444555443  45788999999999999999999988 


Q ss_pred             HhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                           .++++|++|||||+..  +..+.+.+++++++++|+.+++.++++++|.|.+++..|+||++||..+.       
T Consensus        82 -----~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~-------  149 (253)
T PRK08993         82 -----EFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSF-------  149 (253)
T ss_pred             -----HhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhc-------
Confidence                 5688999999999863  34567889999999999999999999999999876435899999999887       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHH-HHHHHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLS-LMAFTVLK  292 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~-~~~~~~~~  292 (365)
                                   .+.+....|++||+|+++++++++.|+.   +.||+|++|+||+++|++......... ........
T Consensus       150 -------------~~~~~~~~Y~~sKaa~~~~~~~la~e~~---~~gi~v~~v~pG~v~T~~~~~~~~~~~~~~~~~~~~  213 (253)
T PRK08993        150 -------------QGGIRVPSYTASKSGVMGVTRLMANEWA---KHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRI  213 (253)
T ss_pred             -------------cCCCCCcchHHHHHHHHHHHHHHHHHhh---hhCeEEEEEeeCcccCcchhhhccchHHHHHHHhcC
Confidence                         6667778999999999999999999998   789999999999999998765422111 11222334


Q ss_pred             HhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCc
Q 017812          293 LLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  328 (365)
Q Consensus       293 ~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~  328 (365)
                      |.+|+.+|+|+|+.+++++... ...+|+.+..++|.
T Consensus       214 p~~r~~~p~eva~~~~~l~s~~~~~~~G~~~~~dgg~  250 (253)
T PRK08993        214 PAGRWGLPSDLMGPVVFLASSASDYINGYTIAVDGGW  250 (253)
T ss_pred             CCCCCcCHHHHHHHHHHHhCccccCccCcEEEECCCE
Confidence            6778999999999999544322 25589988888774

>PRK07791 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.5e-38  Score=288.00  Aligned_cols=237  Identities=22%  Similarity=0.270  Sum_probs=197.4

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCc---------hhHHHHHHHHHhhcCCCceEEEEecCCChhhHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS---------HLLSETMADITSRNKDARLEAFQVDLSSFQSVLK  127 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~---------~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~  127 (365)
                      +++|+++||||++|||+++|++|+++|++|++++|+.         +.++++.+++...  +.++.++.+|++|++++.+
T Consensus         4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dv~~~~~v~~   81 (286)
T PRK07791          4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAA--GGEAVANGDDIADWDGAAN   81 (286)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhc--CCceEEEeCCCCCHHHHHH
Confidence            6799999999999999999999999999999999876         6777777777654  4578899999999999999


Q ss_pred             HHHHHHHHHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCC-----CCCeEEEE
Q 017812          128 FKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP-----VPSRIVNV  200 (365)
Q Consensus       128 ~~~~~~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~-----~~g~iV~v  200 (365)
                      +++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.|+++++++++|+|+++.     ..|+||++
T Consensus        82 ~~~~~~~------~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~i  155 (286)
T PRK07791         82 LVDAAVE------TFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINT  155 (286)
T ss_pred             HHHHHHH------hcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEe
Confidence            9999988      6689999999999864  345778999999999999999999999999997542     13799999


Q ss_pred             cCCcccccccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccch
Q 017812          201 TSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP  280 (365)
Q Consensus       201 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~  280 (365)
                      ||.++.                    .+.++...|++||+|+++|+++++.|++   +.||+||+|+|| +.|++.....
T Consensus       156 sS~~~~--------------------~~~~~~~~Y~asKaal~~l~~~la~el~---~~gIrVn~v~Pg-~~T~~~~~~~  211 (286)
T PRK07791        156 SSGAGL--------------------QGSVGQGNYSAAKAGIAALTLVAAAELG---RYGVTVNAIAPA-ARTRMTETVF  211 (286)
T ss_pred             CchhhC--------------------cCCCCchhhHHHHHHHHHHHHHHHHHHH---HhCeEEEEECCC-CCCCcchhhH
Confidence            999988                    7778899999999999999999999998   789999999999 8999864321


Q ss_pred             hHHHHHHHHHHHHhc--CCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017812          281 SFLSLMAFTVLKLLG--LLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  330 (365)
Q Consensus       281 ~~~~~~~~~~~~~~~--~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~  330 (365)
                      ..     .....+.+  +..+|+|+|+.+++++... ...+|+++..++|...
T Consensus       212 ~~-----~~~~~~~~~~~~~~pedva~~~~~L~s~~~~~itG~~i~vdgG~~~  259 (286)
T PRK07791        212 AE-----MMAKPEEGEFDAMAPENVSPLVVWLGSAESRDVTGKVFEVEGGKIS  259 (286)
T ss_pred             HH-----HHhcCcccccCCCCHHHHHHHHHHHhCchhcCCCCcEEEEcCCceE
Confidence            10     01111222  3569999999999644322 3568999999988765

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=5.8e-38  Score=284.00  Aligned_cols=235  Identities=17%  Similarity=0.165  Sum_probs=197.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhccC
Q 017812           61 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  140 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~~  140 (365)
                      +++||||++|||+++|++|+++|++|++++|++++++++.+++.+.   .++.++++|++|+++++++++++.+      
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~Dv~d~~~~~~~~~~~~~------   72 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEY---GEVYAVKADLSDKDDLKNLVKEAWE------   72 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc---CCceEEEcCCCCHHHHHHHHHHHHH------
Confidence            6999999999999999999999999999999999988888888653   2678999999999999999999987      


Q ss_pred             CCCCeeEEEecCCccc----CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017812          141 MHSSIQLLINNAGILA----TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  216 (365)
Q Consensus       141 ~~~~id~lv~nAG~~~----~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~  216 (365)
                      .++++|+||||||...    +..+.+.+++.+.+++|+.+++++++.++|.|.+.+..|+||++||.++.          
T Consensus        73 ~~g~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~----------  142 (259)
T PRK08340         73 LLGGIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVK----------  142 (259)
T ss_pred             hcCCCCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccC----------
Confidence            5689999999999753    24466788999999999999999999999998743336899999999887          


Q ss_pred             cccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh---------HHH--H
Q 017812          217 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS---------FLS--L  285 (365)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~---------~~~--~  285 (365)
                                .+.++...|++||+|+++|+++|+.|+.   ++||+|++|+||+++|++.+....         ...  .
T Consensus       143 ----------~~~~~~~~y~~sKaa~~~~~~~la~e~~---~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~  209 (259)
T PRK08340        143 ----------EPMPPLVLADVTRAGLVQLAKGVSRTYG---GKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWE  209 (259)
T ss_pred             ----------CCCCCchHHHHHHHHHHHHHHHHHHHhC---CCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHH
Confidence                      6778888999999999999999999998   899999999999999998753110         000  0


Q ss_pred             HHHHHHHHhcCCCCHHHHHHHHHHHhcCCC---CCcccEEeCCCCcc
Q 017812          286 MAFTVLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRT  329 (365)
Q Consensus       286 ~~~~~~~~~~~~~~p~e~A~~i~~~~l~~~---~~~G~~~~~~~g~~  329 (365)
                      .......|++|+.+|+|+|++++  +|.++   ..+|+.+..|+|..
T Consensus       210 ~~~~~~~p~~r~~~p~dva~~~~--fL~s~~~~~itG~~i~vdgg~~  254 (259)
T PRK08340        210 REVLERTPLKRTGRWEELGSLIA--FLLSENAEYMLGSTIVFDGAMT  254 (259)
T ss_pred             HHHhccCCccCCCCHHHHHHHHH--HHcCcccccccCceEeecCCcC
Confidence            11122346789999999999999  55554   56899998888854

>PLN02780 ketoreductase/ oxidoreductase

Probab=100.00  E-value=5.7e-38  Score=291.68  Aligned_cols=215  Identities=22%  Similarity=0.267  Sum_probs=178.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .|++++|||||+|||+++|++|+++|++|++++|++++++++.+++.+.+++.++..+.+|+++  ++.+.++++.+.++
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~l~~~~~  129 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG--DIDEGVKRIKETIE  129 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC--CcHHHHHHHHHHhc
Confidence            5899999999999999999999999999999999999999999999877656688899999985  33344444444331


Q ss_pred             ccCCCCCeeEEEecCCccc----CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          138 DSDMHSSIQLLINNAGILA----TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~----~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                          ..++|++|||||+..    +..+.+.+++++++++|+.|++.+++.++|.|.+++ .|+||++||.++...     
T Consensus       130 ----~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~g~IV~iSS~a~~~~-----  199 (320)
T PLN02780        130 ----GLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIINIGSGAAIVI-----  199 (320)
T ss_pred             ----CCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC-CcEEEEEechhhccC-----
Confidence                235789999999863    245678999999999999999999999999998876 699999999987510     


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  293 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  293 (365)
                                   .+.|..+.|++||+|+++|+++|+.|+.   +.||+|++|+||+|+|++.......           
T Consensus       200 -------------~~~p~~~~Y~aSKaal~~~~~~L~~El~---~~gI~V~~v~PG~v~T~~~~~~~~~-----------  252 (320)
T PLN02780        200 -------------PSDPLYAVYAATKAYIDQFSRCLYVEYK---KSGIDVQCQVPLYVATKMASIRRSS-----------  252 (320)
T ss_pred             -------------CCCccchHHHHHHHHHHHHHHHHHHHHh---ccCeEEEEEeeCceecCcccccCCC-----------
Confidence                         1346789999999999999999999998   8899999999999999997521110           


Q ss_pred             hcCCCCHHHHHHHHHHHhc
Q 017812          294 LGLLQSPEKGINSVLDAAL  312 (365)
Q Consensus       294 ~~~~~~p~e~A~~i~~~~l  312 (365)
                      . ...+||++|+.++..+-
T Consensus       253 ~-~~~~p~~~A~~~~~~~~  270 (320)
T PLN02780        253 F-LVPSSDGYARAALRWVG  270 (320)
T ss_pred             C-CCCCHHHHHHHHHHHhC
Confidence            0 13599999999997663

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=100.00  E-value=1.1e-37  Score=285.00  Aligned_cols=243  Identities=21%  Similarity=0.242  Sum_probs=203.8

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.+.++++.+++...  +.++.++++|++|++++..+++++.+
T Consensus         6 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~   83 (278)
T PRK08277          6 FSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAA--GGEALAVKADVLDKESLEQARQQILE   83 (278)
T ss_pred             eccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999998888888877654  45788999999999999999999887


Q ss_pred             HHhccCCCCCeeEEEecCCcccC-----------------CCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeE
Q 017812          135 WLLDSDMHSSIQLLINNAGILAT-----------------SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRI  197 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~~-----------------~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~i  197 (365)
                            .++++|++|||||+..+                 ..+.+.+++++.+++|+.+++.+++.++|.|.+++ .|+|
T Consensus        84 ------~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~i  156 (278)
T PRK08277         84 ------DFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRK-GGNI  156 (278)
T ss_pred             ------HcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEE
Confidence                  56889999999997532                 23567899999999999999999999999998775 6899


Q ss_pred             EEEcCCcccccccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccc
Q 017812          198 VNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMR  277 (365)
Q Consensus       198 V~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~  277 (365)
                      |++||.++.                    .+.++...|++||+|+++++++++.|+.   ..||+||+|+||+|+|++.+
T Consensus       157 i~isS~~~~--------------------~~~~~~~~Y~~sK~a~~~l~~~la~e~~---~~girvn~v~Pg~v~t~~~~  213 (278)
T PRK08277        157 INISSMNAF--------------------TPLTKVPAYSAAKAAISNFTQWLAVHFA---KVGIRVNAIAPGFFLTEQNR  213 (278)
T ss_pred             EEEccchhc--------------------CCCCCCchhHHHHHHHHHHHHHHHHHhC---ccCeEEEEEEeccCcCcchh
Confidence            999999988                    7778889999999999999999999998   78999999999999999865


Q ss_pred             cchh------HHHHHHHHHHHHhcCCCCHHHHHHHHHHHhcC--CCCCcccEEeCCCCcc
Q 017812          278 EVPS------FLSLMAFTVLKLLGLLQSPEKGINSVLDAALA--PPETSGVYFFGGKGRT  329 (365)
Q Consensus       278 ~~~~------~~~~~~~~~~~~~~~~~~p~e~A~~i~~~~l~--~~~~~G~~~~~~~g~~  329 (365)
                      ....      ...........|++|+.+|+|+|+++++++..  +...+|+.+..++|..
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l~s~~~~~~~tG~~i~vdgG~~  273 (278)
T PRK08277        214 ALLFNEDGSLTERANKILAHTPMGRFGKPEELLGTLLWLADEKASSFVTGVVLPVDGGFS  273 (278)
T ss_pred             hhhccccccchhHHHHHhccCCccCCCCHHHHHHHHHHHcCccccCCcCCCEEEECCCee
Confidence            4211      01111122234678899999999999954432  2256899999888854

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-37  Score=280.67  Aligned_cols=242  Identities=16%  Similarity=0.227  Sum_probs=204.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++...  +.++..+.+|++|+++++++++++.+ 
T Consensus         6 ~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~-   82 (254)
T PRK08085          6 SLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQE--GIKAHAAPFNVTHKQEVEAAIEHIEK-   82 (254)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhc--CCeEEEEecCCCCHHHHHHHHHHHHH-
Confidence            468999999999999999999999999999999999999888888888654  35678899999999999999999887 


Q ss_pred             HhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                           .++++|++|||||...  +..+.+.++|++++++|+.+++.++++++|.|.+++ .++||++||..+.       
T Consensus        83 -----~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~-------  149 (254)
T PRK08085         83 -----DIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQ-AGKIINICSMQSE-------  149 (254)
T ss_pred             -----hcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEccchhc-------
Confidence                 5688999999999863  445678999999999999999999999999998765 6899999998876       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHH-HHHHHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLS-LMAFTVLK  292 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~-~~~~~~~~  292 (365)
                                   .+.++...|++||+|++++++++++|+.   +.||++|+|+||+++|++.+....... ........
T Consensus       150 -------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~  213 (254)
T PRK08085        150 -------------LGRDTITPYAASKGAVKMLTRGMCVELA---RHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRT  213 (254)
T ss_pred             -------------cCCCCCcchHHHHHHHHHHHHHHHHHHH---hhCeEEEEEEeCCCCCcchhhhccCHHHHHHHHhcC
Confidence                         6667788999999999999999999998   789999999999999998765322111 11122334


Q ss_pred             HhcCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCcc
Q 017812          293 LLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRT  329 (365)
Q Consensus       293 ~~~~~~~p~e~A~~i~~~~l~-~~~~~G~~~~~~~g~~  329 (365)
                      |++++.+|+|+|+.+++++.. +...+|+.+..++|..
T Consensus       214 p~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgg~~  251 (254)
T PRK08085        214 PAARWGDPQELIGAAVFLSSKASDFVNGHLLFVDGGML  251 (254)
T ss_pred             CCCCCcCHHHHHHHHHHHhCccccCCcCCEEEECCCee
Confidence            677889999999999954432 2356899998888854

>PRK06398 aldose dehydrogenase; Validated

Probab=100.00  E-value=1e-37  Score=282.16  Aligned_cols=231  Identities=23%  Similarity=0.306  Sum_probs=192.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      +++||+++||||++|||+++|++|+++|++|++++|+.+.             ..++.++++|++|+++++++++++.+ 
T Consensus         3 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~-------------~~~~~~~~~D~~~~~~i~~~~~~~~~-   68 (258)
T PRK06398          3 GLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPS-------------YNDVDYFKVDVSNKEQVIKGIDYVIS-   68 (258)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccc-------------cCceEEEEccCCCHHHHHHHHHHHHH-
Confidence            5789999999999999999999999999999999998643             12578999999999999999999988 


Q ss_pred             HhccCCCCCeeEEEecCCcc--cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                           .++++|+||||||+.  .+..+.+.++|++++++|+.|++.++++++|+|.+++ .|+||++||.++.       
T Consensus        69 -----~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~-------  135 (258)
T PRK06398         69 -----KYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQD-KGVIINIASVQSF-------  135 (258)
T ss_pred             -----HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEeCcchhc-------
Confidence                 568899999999985  3455778999999999999999999999999998765 6899999999887       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh------HHH---
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS------FLS---  284 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~------~~~---  284 (365)
                                   .+.++..+|++||+|+++++++++.|+.   + +|+||+|+||+++|++.+....      ...   
T Consensus       136 -------------~~~~~~~~Y~~sKaal~~~~~~la~e~~---~-~i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~  198 (258)
T PRK06398        136 -------------AVTRNAAAYVTSKHAVLGLTRSIAVDYA---P-TIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVER  198 (258)
T ss_pred             -------------cCCCCCchhhhhHHHHHHHHHHHHHHhC---C-CCEEEEEecCCccchHHhhhhhccccCChhhhHH
Confidence                         6778889999999999999999999996   4 4999999999999998754210      000   


Q ss_pred             -HHHHHHHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017812          285 -LMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  330 (365)
Q Consensus       285 -~~~~~~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~  330 (365)
                       ........|++++.+|+|+|+.+++++... ...+|+.+..++|...
T Consensus       199 ~~~~~~~~~~~~~~~~p~eva~~~~~l~s~~~~~~~G~~i~~dgg~~~  246 (258)
T PRK06398        199 KIREWGEMHPMKRVGKPEEVAYVVAFLASDLASFITGECVTVDGGLRA  246 (258)
T ss_pred             HHHhhhhcCCcCCCcCHHHHHHHHHHHcCcccCCCCCcEEEECCcccc
Confidence             011122346778899999999999654322 2568999998988654

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=100.00  E-value=2.5e-37  Score=279.32  Aligned_cols=238  Identities=24%  Similarity=0.287  Sum_probs=194.2

Q ss_pred             EEEEecCCChHHHHHHHHHHH----CCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           61 VCIVTGATSGLGAAAAYALSR----EGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~----~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      +++||||++|||+++|++|++    .|++|++++|+.++++++.+++....++.++.++++|++|.++++++++++.+.+
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   81 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP   81 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence            699999999999999999997    7999999999999999998888765445678999999999999999999988732


Q ss_pred             hccCCCCCeeEEEecCCcccCC----CC-CCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCC-CCCeEEEEcCCccccccc
Q 017812          137 LDSDMHSSIQLLINNAGILATS----SR-LTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP-VPSRIVNVTSFTHRNVFN  210 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~~~----~~-~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~-~~g~iV~vsS~~~~~~~~  210 (365)
                      +..  .-..|+||||||+....    .+ .+.+++++++++|+.|++++++.++|.|++++ ..|+||++||.++.    
T Consensus        82 g~~--~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~----  155 (256)
T TIGR01500        82 RPK--GLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAI----  155 (256)
T ss_pred             ccC--CCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhC----
Confidence            110  01236999999985321    22 25689999999999999999999999998653 24799999999887    


Q ss_pred             ccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh----HHHHH
Q 017812          211 AQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS----FLSLM  286 (365)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~----~~~~~  286 (365)
                                      .+.+++.+|++||+|+++|+++|+.|+.   ++||+|++|+||+|+|++.+...+    .....
T Consensus       156 ----------------~~~~~~~~Y~asKaal~~l~~~la~e~~---~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~  216 (256)
T TIGR01500       156 ----------------QPFKGWALYCAGKAARDMLFQVLALEEK---NPNVRVLNYAPGVLDTDMQQQVREESVDPDMRK  216 (256)
T ss_pred             ----------------CCCCCchHHHHHHHHHHHHHHHHHHHhc---CCCeEEEEecCCcccchHHHHHHHhcCChhHHH
Confidence                            7778889999999999999999999998   789999999999999999764321    11112


Q ss_pred             HHHHHHHhcCCCCHHHHHHHHHHHhcCCCCCcccEEe
Q 017812          287 AFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFF  323 (365)
Q Consensus       287 ~~~~~~~~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~  323 (365)
                      .+....|++++.+|+|+|+.+++++-.....+|+.+.
T Consensus       217 ~~~~~~~~~~~~~p~eva~~~~~l~~~~~~~~G~~~~  253 (256)
T TIGR01500       217 GLQELKAKGKLVDPKVSAQKLLSLLEKDKFKSGAHVD  253 (256)
T ss_pred             HHHHHHhcCCCCCHHHHHHHHHHHHhcCCcCCcceee
Confidence            2334567888999999999999776545566777653

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK07035 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-37  Score=278.56  Aligned_cols=241  Identities=20%  Similarity=0.247  Sum_probs=202.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      ++++|+++||||++|||++++++|+++|++|++++|+.++++++.+++.+.  +.+++++++|+++.++++++++++.+ 
T Consensus         5 ~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~-   81 (252)
T PRK07035          5 DLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAA--GGKAEALACHIGEMEQIDALFAHIRE-   81 (252)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHH-
Confidence            478999999999999999999999999999999999998888888888654  34678899999999999999999888 


Q ss_pred             HhccCCCCCeeEEEecCCcc---cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017812          136 LLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~---~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~  212 (365)
                           ..+++|++|||||..   .+..+.+.+++++.+++|+.+++.++++++|+|++++ .++||++||..+.      
T Consensus        82 -----~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~------  149 (252)
T PRK07035         82 -----RHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQG-GGSIVNVASVNGV------  149 (252)
T ss_pred             -----HcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CcEEEEECchhhc------
Confidence                 567899999999974   3445678899999999999999999999999998765 6899999999887      


Q ss_pred             CCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHH-HHHHHHH
Q 017812          213 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLS-LMAFTVL  291 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~-~~~~~~~  291 (365)
                                    .+.++...|++||+++++|++++++|+.   +.||+|++|+||+|+|++......... .......
T Consensus       150 --------------~~~~~~~~Y~~sK~al~~~~~~l~~e~~---~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~  212 (252)
T PRK07035        150 --------------SPGDFQGIYSITKAAVISMTKAFAKECA---PFGIRVNALLPGLTDTKFASALFKNDAILKQALAH  212 (252)
T ss_pred             --------------CCCCCCcchHHHHHHHHHHHHHHHHHHh---hcCEEEEEEeeccccCcccccccCCHHHHHHHHcc
Confidence                          6777888999999999999999999998   789999999999999998765422111 1112222


Q ss_pred             HHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCc
Q 017812          292 KLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  328 (365)
Q Consensus       292 ~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~  328 (365)
                      .|.+++.+|+|+|+.+++++... ...+|+.+..++|.
T Consensus       213 ~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~dgg~  250 (252)
T PRK07035        213 IPLRRHAEPSEMAGAVLYLASDASSYTTGECLNVDGGY  250 (252)
T ss_pred             CCCCCcCCHHHHHHHHHHHhCccccCccCCEEEeCCCc
Confidence            35678889999999999543322 24589998888763

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-37  Score=279.96  Aligned_cols=243  Identities=20%  Similarity=0.243  Sum_probs=201.1

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHH
Q 017812           54 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  133 (365)
Q Consensus        54 ~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~  133 (365)
                      ..++++|++|||||++|||+++|++|+++|++|++++|+ ++.+++.+.+.+.  +.++.++++|+++.+++.++++++.
T Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~   86 (258)
T PRK06935         10 FFSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKE--GRKVTFVQVDLTKPESAEKVVKEAL   86 (258)
T ss_pred             cccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHH
Confidence            345789999999999999999999999999999999998 5566666666443  3578899999999999999999998


Q ss_pred             HHHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017812          134 QWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  211 (365)
Q Consensus       134 ~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~  211 (365)
                      +      .++++|++|||||...  +..+.+.+++++.+++|+.+++.++++++|.|++++ .|+||++||..+.     
T Consensus        87 ~------~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~-----  154 (258)
T PRK06935         87 E------EFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQG-SGKIINIASMLSF-----  154 (258)
T ss_pred             H------HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcC-CeEEEEECCHHhc-----
Confidence            8      5688999999999863  345667899999999999999999999999998876 6899999999887     


Q ss_pred             cCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHH-HHHHHH
Q 017812          212 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLS-LMAFTV  290 (365)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~-~~~~~~  290 (365)
                                     .+.+....|++||+|++++++++++|+.   +.||+||+|+||+++|++.+..+.... ......
T Consensus       155 ---------------~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~  216 (258)
T PRK06935        155 ---------------QGGKFVPAYTASKHGVAGLTKAFANELA---AYNIQVNAIAPGYIKTANTAPIRADKNRNDEILK  216 (258)
T ss_pred             ---------------cCCCCchhhHHHHHHHHHHHHHHHHHhh---hhCeEEEEEEeccccccchhhcccChHHHHHHHh
Confidence                           6777788999999999999999999998   789999999999999998764332111 111222


Q ss_pred             HHHhcCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCcc
Q 017812          291 LKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRT  329 (365)
Q Consensus       291 ~~~~~~~~~p~e~A~~i~~~~l~-~~~~~G~~~~~~~g~~  329 (365)
                      ..|.+++.+|+|+|..+++++.. +...+|+.+..++|..
T Consensus       217 ~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~  256 (258)
T PRK06935        217 RIPAGRWGEPDDLMGAAVFLASRASDYVNGHILAVDGGWL  256 (258)
T ss_pred             cCCCCCCCCHHHHHHHHHHHcChhhcCCCCCEEEECCCee
Confidence            34567889999999999953322 1245899998888743

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.2e-37  Score=278.63  Aligned_cols=237  Identities=19%  Similarity=0.229  Sum_probs=195.8

Q ss_pred             CCCCCCEEEEecCC--ChHHHHHHHHHHHCCCEEEEEecC-----------chhHHHHHHHHHhhcCCCceEEEEecCCC
Q 017812           55 TGIKRPVCIVTGAT--SGLGAAAAYALSREGFHVVLVGRS-----------SHLLSETMADITSRNKDARLEAFQVDLSS  121 (365)
Q Consensus        55 ~~~~~k~vlITGas--sGIG~~~a~~la~~G~~Vil~~r~-----------~~~~~~~~~~l~~~~~~~~~~~~~~Dls~  121 (365)
                      +.++||+++||||+  +|||+++|++|+++|++|++++|+           .+...+..+++.+.  +.++.++++|++|
T Consensus         2 ~~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~D~~~   79 (256)
T PRK12859          2 NQLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKN--GVKVSSMELDLTQ   79 (256)
T ss_pred             CCcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhc--CCeEEEEEcCCCC
Confidence            35789999999999  599999999999999999998643           23334444555543  5678999999999


Q ss_pred             hhhHHHHHHHHHHHHhccCCCCCeeEEEecCCcc--cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEE
Q 017812          122 FQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVN  199 (365)
Q Consensus       122 ~~~v~~~~~~~~~~~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~  199 (365)
                      .++++++++++.+      ..+++|++|||||..  .+..+.+.+++++++++|+.+++.++++++|.|.+++ .|+||+
T Consensus        80 ~~~i~~~~~~~~~------~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~  152 (256)
T PRK12859         80 NDAPKELLNKVTE------QLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKS-GGRIIN  152 (256)
T ss_pred             HHHHHHHHHHHHH------HcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEE
Confidence            9999999999987      568899999999976  3446789999999999999999999999999998765 689999


Q ss_pred             EcCCcccccccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc
Q 017812          200 VTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV  279 (365)
Q Consensus       200 vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~  279 (365)
                      +||.++.                    .+.+++..|++||+|+++|+++++.++.   ++||+|++|+||+++|++....
T Consensus       153 isS~~~~--------------------~~~~~~~~Y~~sK~a~~~l~~~la~~~~---~~~i~v~~v~PG~i~t~~~~~~  209 (256)
T PRK12859        153 MTSGQFQ--------------------GPMVGELAYAATKGAIDALTSSLAAEVA---HLGITVNAINPGPTDTGWMTEE  209 (256)
T ss_pred             EcccccC--------------------CCCCCchHHHHHHHHHHHHHHHHHHHhh---hhCeEEEEEEEccccCCCCCHH
Confidence            9999887                    7778889999999999999999999998   7899999999999999975421


Q ss_pred             hhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCC
Q 017812          280 PSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKG  327 (365)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g  327 (365)
                        .  ........|++++.+|+|+|+.+++++... ...+|+++..|+|
T Consensus       210 --~--~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgg  254 (256)
T PRK12859        210 --I--KQGLLPMFPFGRIGEPKDAARLIKFLASEEAEWITGQIIHSEGG  254 (256)
T ss_pred             --H--HHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCcEEEeCCC
Confidence              1  111222345667889999999999654332 3568999988887

>PRK06172 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3e-37  Score=278.23  Aligned_cols=242  Identities=23%  Similarity=0.262  Sum_probs=205.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      ++++|+++||||++|||.++|++|+++|++|++++|+.+++++..+++.+.  +.++.++.+|++|.+++.++++++.+ 
T Consensus         4 ~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~-   80 (253)
T PRK06172          4 TFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREA--GGEALFVACDVTRDAEVKALVEQTIA-   80 (253)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHH-
Confidence            467999999999999999999999999999999999998888888877654  45789999999999999999999987 


Q ss_pred             HhccCCCCCeeEEEecCCccc---CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017812          136 LLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~  212 (365)
                           .++++|++|||||...   +..+.+.+++++++++|+.+++.++++++|.|.+++ .++||++||..+.      
T Consensus        81 -----~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~~sS~~~~------  148 (253)
T PRK06172         81 -----AYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQG-GGAIVNTASVAGL------  148 (253)
T ss_pred             -----HhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECchhhc------
Confidence                 5688999999999853   245678899999999999999999999999998765 6899999999988      


Q ss_pred             CCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh--HHHHHHHHH
Q 017812          213 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS--FLSLMAFTV  290 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~--~~~~~~~~~  290 (365)
                                    .+.++...|++||+|+++|+++++.|+.   +.||+|++|+||+|+|++.+....  .........
T Consensus       149 --------------~~~~~~~~Y~~sKaa~~~~~~~la~e~~---~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~  211 (253)
T PRK06172        149 --------------GAAPKMSIYAASKHAVIGLTKSAAIEYA---KKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAA  211 (253)
T ss_pred             --------------cCCCCCchhHHHHHHHHHHHHHHHHHhc---ccCeEEEEEEeCCccChhhhhhcccChHHHHHHhc
Confidence                          6778889999999999999999999997   789999999999999999775422  111111223


Q ss_pred             HHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017812          291 LKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  329 (365)
Q Consensus       291 ~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~  329 (365)
                      ..|.+++.+|+|+|+.+++++... ...+|+++..++|..
T Consensus       212 ~~~~~~~~~p~~ia~~~~~l~~~~~~~~~G~~i~~dgg~~  251 (253)
T PRK06172        212 MHPVGRIGKVEEVASAVLYLCSDGASFTTGHALMVDGGAT  251 (253)
T ss_pred             cCCCCCccCHHHHHHHHHHHhCccccCcCCcEEEECCCcc
Confidence            345678889999999999655432 356899999888864

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-37  Score=282.47  Aligned_cols=235  Identities=20%  Similarity=0.259  Sum_probs=193.9

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      +++|+++||||++|||+++|++|+++|++|++++|+.++++++.+++     +.++.++++|++|+++++++++++.+  
T Consensus         4 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~--   76 (263)
T PRK06200          4 LHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF-----GDHVLVVEGDVTSYADNQRAVDQTVD--   76 (263)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCcceEEEccCCCHHHHHHHHHHHHH--
Confidence            67899999999999999999999999999999999988877766554     34678899999999999999999987  


Q ss_pred             hccCCCCCeeEEEecCCccc---CCCCCCHHH----HhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccc
Q 017812          137 LDSDMHSSIQLLINNAGILA---TSSRLTPEG----YDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVF  209 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~---~~~~~~~~~----~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~  209 (365)
                          .++++|+||||||+..   +..+.+.++    |++++++|+.+++.+++.++|.|++++  |+||++||.++.   
T Consensus        77 ----~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--g~iv~~sS~~~~---  147 (263)
T PRK06200         77 ----AFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASG--GSMIFTLSNSSF---  147 (263)
T ss_pred             ----hcCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcC--CEEEEECChhhc---
Confidence                5689999999999853   333455554    889999999999999999999987654  899999999987   


Q ss_pred             cccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccch---------
Q 017812          210 NAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP---------  280 (365)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~---------  280 (365)
                                       .+.++...|++||+|++.|+++++.|++   + +|+||+|+||+|+|++.....         
T Consensus       148 -----------------~~~~~~~~Y~~sK~a~~~~~~~la~el~---~-~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~  206 (263)
T PRK06200        148 -----------------YPGGGGPLYTASKHAVVGLVRQLAYELA---P-KIRVNGVAPGGTVTDLRGPASLGQGETSIS  206 (263)
T ss_pred             -----------------CCCCCCchhHHHHHHHHHHHHHHHHHHh---c-CcEEEEEeCCccccCCcCccccCCCCcccc
Confidence                             6677788999999999999999999997   4 599999999999999864210         


Q ss_pred             h-HHHHHHHHHHHHhcCCCCHHHHHHHHHHHhcCCC----CCcccEEeCCCCccc
Q 017812          281 S-FLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPP----ETSGVYFFGGKGRTV  330 (365)
Q Consensus       281 ~-~~~~~~~~~~~~~~~~~~p~e~A~~i~~~~l~~~----~~~G~~~~~~~g~~~  330 (365)
                      . ...........|++|+.+|+|+|+.++  +|.++    ..+|+.+..|+|...
T Consensus       207 ~~~~~~~~~~~~~p~~r~~~~~eva~~~~--fl~s~~~~~~itG~~i~vdgG~~~  259 (263)
T PRK06200        207 DSPGLADMIAAITPLQFAPQPEDHTGPYV--LLASRRNSRALTGVVINADGGLGI  259 (263)
T ss_pred             cccchhHHhhcCCCCCCCCCHHHHhhhhh--heecccccCcccceEEEEcCceee
Confidence            0 001112223347789999999999999  45543    358999998888544

>PRK07985 oxidoreductase; Provisional

Probab=100.00  E-value=3.1e-37  Score=284.04  Aligned_cols=239  Identities=20%  Similarity=0.211  Sum_probs=196.4

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCc--hhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHH
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS--HLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  132 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~  132 (365)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.  +..+++.+.+...  +.++.++.+|++|.+++.++++++
T Consensus        45 ~~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~  122 (294)
T PRK07985         45 GRLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEEC--GRKAVLLPGDLSDEKFARSLVHEA  122 (294)
T ss_pred             CccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHc--CCeEEEEEccCCCHHHHHHHHHHH
Confidence            358899999999999999999999999999999988753  3455555554433  456888999999999999999999


Q ss_pred             HHHHhccCCCCCeeEEEecCCcc---cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccc
Q 017812          133 QQWLLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVF  209 (365)
Q Consensus       133 ~~~~~~~~~~~~id~lv~nAG~~---~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~  209 (365)
                      .+      .++++|++|||||..   .+..+.+.+++++++++|+.|++.++++++|+|.+   .|+||++||.++.   
T Consensus       123 ~~------~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~---~g~iv~iSS~~~~---  190 (294)
T PRK07985        123 HK------ALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPK---GASIITTSSIQAY---  190 (294)
T ss_pred             HH------HhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhc---CCEEEEECCchhc---
Confidence            87      568899999999974   34557789999999999999999999999999965   3799999999987   


Q ss_pred             cccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccch-hHHHHHHH
Q 017812          210 NAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP-SFLSLMAF  288 (365)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~-~~~~~~~~  288 (365)
                                       .+.+...+|++||+|+++++++++.|++   +.||+||+|+||+|+|++..... .......+
T Consensus       191 -----------------~~~~~~~~Y~asKaal~~l~~~la~el~---~~gIrvn~i~PG~v~t~~~~~~~~~~~~~~~~  250 (294)
T PRK07985        191 -----------------QPSPHLLDYAATKAAILNYSRGLAKQVA---EKGIRVNIVAPGPIWTALQISGGQTQDKIPQF  250 (294)
T ss_pred             -----------------cCCCCcchhHHHHHHHHHHHHHHHHHHh---HhCcEEEEEECCcCccccccccCCCHHHHHHH
Confidence                             6777888999999999999999999998   78999999999999999853211 11111122


Q ss_pred             HHHHHhcCCCCHHHHHHHHHHHhcCCC---CCcccEEeCCCCcc
Q 017812          289 TVLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRT  329 (365)
Q Consensus       289 ~~~~~~~~~~~p~e~A~~i~~~~l~~~---~~~G~~~~~~~g~~  329 (365)
                      ....|++++.+|+|+|+++++  |.++   ..+|+.+..++|..
T Consensus       251 ~~~~~~~r~~~pedva~~~~f--L~s~~~~~itG~~i~vdgG~~  292 (294)
T PRK07985        251 GQQTPMKRAGQPAELAPVYVY--LASQESSYVTAEVHGVCGGEH  292 (294)
T ss_pred             hccCCCCCCCCHHHHHHHHHh--hhChhcCCccccEEeeCCCee
Confidence            233467788999999999994  4443   45799998888864

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=5.1e-37  Score=278.11  Aligned_cols=249  Identities=21%  Similarity=0.306  Sum_probs=205.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCc-hhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS-HLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      ++++|+++||||++|||+++|++|+++|++|++++|+. +..+...+++...  +.++.++.+|++|.++++++++++.+
T Consensus         4 ~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~i~~~~~~~~~   81 (261)
T PRK08936          4 DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKA--GGEAIAVKGDVTVESDVVNLIQTAVK   81 (261)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc--CCeEEEEEecCCCHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999998854 4566666676554  45788999999999999999999887


Q ss_pred             HHhccCCCCCeeEEEecCCcccC--CCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017812          135 WLLDSDMHSSIQLLINNAGILAT--SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~~--~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~  212 (365)
                            ..+++|++|||||...+  ..+.+.+++++++++|+.+++.+++.++|.|.+++..|+||++||..+.      
T Consensus        82 ------~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~------  149 (261)
T PRK08936         82 ------EFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQ------  149 (261)
T ss_pred             ------HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccc------
Confidence                  56889999999998643  4467889999999999999999999999999876546899999998877      


Q ss_pred             CCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc-hhHHHHHHHHHH
Q 017812          213 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV-PSFLSLMAFTVL  291 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~-~~~~~~~~~~~~  291 (365)
                                    .+.++..+|++||+|+++++++++.++.   +.||+|++|+||+++|++.+.. +...........
T Consensus       150 --------------~~~~~~~~Y~~sKaa~~~~~~~la~e~~---~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~  212 (261)
T PRK08936        150 --------------IPWPLFVHYAASKGGVKLMTETLAMEYA---PKGIRVNNIGPGAINTPINAEKFADPKQRADVESM  212 (261)
T ss_pred             --------------CCCCCCcccHHHHHHHHHHHHHHHHHHh---hcCeEEEEEEECcCCCCccccccCCHHHHHHHHhc
Confidence                          6778889999999999999999999998   7899999999999999987532 221111122233


Q ss_pred             HHhcCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCccccCCcc
Q 017812          292 KLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTVNSSAL  335 (365)
Q Consensus       292 ~~~~~~~~p~e~A~~i~~~~l~-~~~~~G~~~~~~~g~~~~~~~~  335 (365)
                      .+++++.+|+|+|+.+++++.. +...+|..+..++|..+.|+..
T Consensus       213 ~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~d~g~~~~~~~~  257 (261)
T PRK08936        213 IPMGYIGKPEEIAAVAAWLASSEASYVTGITLFADGGMTLYPSFQ  257 (261)
T ss_pred             CCCCCCcCHHHHHHHHHHHcCcccCCccCcEEEECCCcccCcccc
Confidence            4667889999999999965442 2356899999998877655543

>PRK07831 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.1e-37  Score=277.29  Aligned_cols=242  Identities=20%  Similarity=0.205  Sum_probs=201.5

Q ss_pred             CCCCCEEEEecCCC-hHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATS-GLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        56 ~~~~k~vlITGass-GIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      .+++|+++||||+| |||+++|++|+++|++|++++|+.+++++..+++.+..+..++..+++|++++++++++++++.+
T Consensus        14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   93 (262)
T PRK07831         14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVE   93 (262)
T ss_pred             ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            46789999999985 99999999999999999999999998888888887654445788999999999999999999887


Q ss_pred             HHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017812          135 WLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~  212 (365)
                            .++++|+||||||...  +..+.+.+++++.+++|+.+++.+++.++|.|++++..|+||++||..+.      
T Consensus        94 ------~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~------  161 (262)
T PRK07831         94 ------RLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGW------  161 (262)
T ss_pred             ------HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhc------
Confidence                  5688999999999753  34567889999999999999999999999999876435899999998887      


Q ss_pred             CCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHH
Q 017812          213 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLK  292 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~  292 (365)
                                    .+.++...|++||+|+++++++++.|+.   +.||+|++|+||+++|++.................
T Consensus       162 --------------~~~~~~~~Y~~sKaal~~~~~~la~e~~---~~gI~v~~i~Pg~~~t~~~~~~~~~~~~~~~~~~~  224 (262)
T PRK07831        162 --------------RAQHGQAHYAAAKAGVMALTRCSALEAA---EYGVRINAVAPSIAMHPFLAKVTSAELLDELAARE  224 (262)
T ss_pred             --------------CCCCCCcchHHHHHHHHHHHHHHHHHhC---ccCeEEEEEeeCCccCcccccccCHHHHHHHHhcC
Confidence                          6667788999999999999999999998   78999999999999999876532211111222334


Q ss_pred             HhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCC
Q 017812          293 LLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGK  326 (365)
Q Consensus       293 ~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~  326 (365)
                      +++|+.+|+|+|+.+++++... ...+|+.+..+.
T Consensus       225 ~~~r~~~p~~va~~~~~l~s~~~~~itG~~i~v~~  259 (262)
T PRK07831        225 AFGRAAEPWEVANVIAFLASDYSSYLTGEVVSVSS  259 (262)
T ss_pred             CCCCCcCHHHHHHHHHHHcCchhcCcCCceEEeCC
Confidence            6778899999999999543322 245788887665

>PRK06128 oxidoreductase; Provisional

Probab=100.00  E-value=3.7e-37  Score=284.56  Aligned_cols=242  Identities=21%  Similarity=0.236  Sum_probs=198.4

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCch--hHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHH
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH--LLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  132 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~--~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~  132 (365)
                      ..+++|++|||||++|||+++|++|+++|++|++++++.+  ..+++.+.+...  +.++.++++|++|.++++++++++
T Consensus        51 ~~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~  128 (300)
T PRK06128         51 GRLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAE--GRKAVALPGDLKDEAFCRQLVERA  128 (300)
T ss_pred             cccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHc--CCeEEEEecCCCCHHHHHHHHHHH
Confidence            3478999999999999999999999999999999887643  345566666544  457889999999999999999999


Q ss_pred             HHHHhccCCCCCeeEEEecCCccc---CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccc
Q 017812          133 QQWLLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVF  209 (365)
Q Consensus       133 ~~~~~~~~~~~~id~lv~nAG~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~  209 (365)
                      .+      .++++|+||||||+..   +..+.+.+++++++++|+.|+++++++++|+|.+   .++||++||..++   
T Consensus       129 ~~------~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~~~iv~~sS~~~~---  196 (300)
T PRK06128        129 VK------ELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPP---GASIINTGSIQSY---  196 (300)
T ss_pred             HH------HhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCc---CCEEEEECCcccc---
Confidence            88      5688999999999753   3457789999999999999999999999999965   4799999999988   


Q ss_pred             cccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccch-hHHHHHHH
Q 017812          210 NAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP-SFLSLMAF  288 (365)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~-~~~~~~~~  288 (365)
                                       .+.++...|++||+|+++|+++++.++.   +.||+||+|+||+++|++..... ........
T Consensus       197 -----------------~~~~~~~~Y~asK~a~~~~~~~la~el~---~~gI~v~~v~PG~i~t~~~~~~~~~~~~~~~~  256 (300)
T PRK06128        197 -----------------QPSPTLLDYASTKAAIVAFTKALAKQVA---EKGIRVNAVAPGPVWTPLQPSGGQPPEKIPDF  256 (300)
T ss_pred             -----------------CCCCCchhHHHHHHHHHHHHHHHHHHhh---hcCcEEEEEEECcCcCCCcccCCCCHHHHHHH
Confidence                             6777888999999999999999999998   78999999999999999865321 11111112


Q ss_pred             HHHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017812          289 TVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  330 (365)
Q Consensus       289 ~~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~  330 (365)
                      ....|++|+.+|+|+|..+++++... ...+|+.+..++|..+
T Consensus       257 ~~~~p~~r~~~p~dva~~~~~l~s~~~~~~~G~~~~v~gg~~~  299 (300)
T PRK06128        257 GSETPMKRPGQPVEMAPLYVLLASQESSYVTGEVFGVTGGLLL  299 (300)
T ss_pred             hcCCCCCCCcCHHHHHHHHHHHhCccccCccCcEEeeCCCEeC
Confidence            22346778899999999999543321 2457999998988654

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=100.00  E-value=6.3e-37  Score=276.55  Aligned_cols=243  Identities=19%  Similarity=0.229  Sum_probs=203.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      .+++|+++||||++|||++++++|+++|++|++++|+.+..+++.+++...  +.++.++.+|++|.+++.++++.+.+ 
T Consensus         8 ~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~-   84 (255)
T PRK06113          8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL--GGQAFACRCDITSEQELSALADFALS-   84 (255)
T ss_pred             CcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHH-
Confidence            477999999999999999999999999999999999998888888777654  45788999999999999999999887 


Q ss_pred             HhccCCCCCeeEEEecCCcccC-CCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017812          136 LLDSDMHSSIQLLINNAGILAT-SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  214 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~~-~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~  214 (365)
                           ..+++|++|||||...+ ..+.+.+++++.+++|+.|+++++++++|+|.+.+ .++||++||.++.        
T Consensus        85 -----~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~--------  150 (255)
T PRK06113         85 -----KLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAE--------  150 (255)
T ss_pred             -----HcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcC-CcEEEEEeccccc--------
Confidence                 56889999999998643 23678899999999999999999999999997654 5899999999887        


Q ss_pred             CccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHh
Q 017812          215 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLL  294 (365)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  294 (365)
                                  .+.++...|++||+|+++++++++.++.   ..||+|++|+||+++|++.+...............++
T Consensus       151 ------------~~~~~~~~Y~~sK~a~~~~~~~la~~~~---~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~  215 (255)
T PRK06113        151 ------------NKNINMTSYASSKAAASHLVRNMAFDLG---EKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPI  215 (255)
T ss_pred             ------------CCCCCcchhHHHHHHHHHHHHHHHHHhh---hhCeEEEEEecccccccccccccCHHHHHHHHhcCCC
Confidence                        6777788999999999999999999997   7899999999999999987653211111112222355


Q ss_pred             cCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017812          295 GLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  330 (365)
Q Consensus       295 ~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~  330 (365)
                      +++.+|+|+|+++++++... ...+|+.+..++|+..
T Consensus       216 ~~~~~~~d~a~~~~~l~~~~~~~~~G~~i~~~gg~~~  252 (255)
T PRK06113        216 RRLGQPQDIANAALFLCSPAASWVSGQILTVSGGGVQ  252 (255)
T ss_pred             CCCcCHHHHHHHHHHHcCccccCccCCEEEECCCccc
Confidence            67889999999999654221 2458999999988665

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=5.1e-39  Score=257.88  Aligned_cols=233  Identities=23%  Similarity=0.295  Sum_probs=203.4

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      +++.|+.+++||+..|||+++++.|++.|++|+.++|+++.+.++.++.     ..-+..+..|+++++.+.+.+.    
T Consensus         3 t~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~-----p~~I~Pi~~Dls~wea~~~~l~----   73 (245)
T KOG1207|consen    3 TSLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKET-----PSLIIPIVGDLSAWEALFKLLV----   73 (245)
T ss_pred             ccccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhC-----CcceeeeEecccHHHHHHHhhc----
Confidence            3578999999999999999999999999999999999999988887775     3458999999999887766554    


Q ss_pred             HHhccCCCCCeeEEEecCCcc--cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017812          135 WLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~  212 (365)
                            ...++|.||||||+.  .|+.+++.+.++++|+||+.+.+..++.+.+.+..+..+|.||++||.++.      
T Consensus        74 ------~v~pidgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~------  141 (245)
T KOG1207|consen   74 ------PVFPIDGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASI------  141 (245)
T ss_pred             ------ccCchhhhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcc------
Confidence                  568999999999986  677899999999999999999999999988877776667999999999988      


Q ss_pred             CCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcccc-chhHHHHHHHHHH
Q 017812          213 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE-VPSFLSLMAFTVL  291 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~-~~~~~~~~~~~~~  291 (365)
                                    ++..+...|+++|+|+.+++++|+.|+.   +..||||++.|-.|.|+|.+. +....+...+...
T Consensus       142 --------------R~~~nHtvYcatKaALDmlTk~lAlELG---p~kIRVNsVNPTVVmT~MG~dnWSDP~K~k~mL~r  204 (245)
T KOG1207|consen  142 --------------RPLDNHTVYCATKAALDMLTKCLALELG---PQKIRVNSVNPTVVMTDMGRDNWSDPDKKKKMLDR  204 (245)
T ss_pred             --------------cccCCceEEeecHHHHHHHHHHHHHhhC---cceeEeeccCCeEEEecccccccCCchhccchhhh
Confidence                          8899999999999999999999999998   899999999999999999875 4444444455566


Q ss_pred             HHhcCCCCHHHHHHHHHHHhcCCCC---CcccEEeCCCC
Q 017812          292 KLLGLLQSPEKGINSVLDAALAPPE---TSGVYFFGGKG  327 (365)
Q Consensus       292 ~~~~~~~~p~e~A~~i~~~~l~~~~---~~G~~~~~~~g  327 (365)
                      .|++|+...+|+.++++  ||.++.   .+|..+..++|
T Consensus       205 iPl~rFaEV~eVVnA~l--fLLSd~ssmttGstlpveGG  241 (245)
T KOG1207|consen  205 IPLKRFAEVDEVVNAVL--FLLSDNSSMTTGSTLPVEGG  241 (245)
T ss_pred             CchhhhhHHHHHHhhhe--eeeecCcCcccCceeeecCC
Confidence            78899999999999999  666653   46888877766

>PRK06139 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.5e-37  Score=287.28  Aligned_cols=224  Identities=24%  Similarity=0.311  Sum_probs=191.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      ++++|+++|||||+|||+++|++|+++|++|++++|++++++++.+++++.  +.++.++.+|++|.++++++++++.+ 
T Consensus         4 ~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~--g~~~~~~~~Dv~d~~~v~~~~~~~~~-   80 (330)
T PRK06139          4 PLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRAL--GAEVLVVPTDVTDADQVKALATQAAS-   80 (330)
T ss_pred             CCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHHH-
Confidence            467899999999999999999999999999999999999999998888765  45788999999999999999999987 


Q ss_pred             HhccCCCCCeeEEEecCCcc--cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                           .++++|++|||||+.  .+..+.+.+++++++++|+.|++++++.++|+|++++ .|+||++||..+.       
T Consensus        81 -----~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~-~g~iV~isS~~~~-------  147 (330)
T PRK06139         81 -----FGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQG-HGIFINMISLGGF-------  147 (330)
T ss_pred             -----hcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcC-CCEEEEEcChhhc-------
Confidence                 568899999999986  3456778899999999999999999999999999876 6899999999988       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCC-CCeEEEEecCCcccCCccccchhHHHHHHHHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKS-RHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLK  292 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~-~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~  292 (365)
                                   .+.|.+..|++||+|+.+|+++|+.|+.   . +||+|++|+||+++|++.........    ....
T Consensus       148 -------------~~~p~~~~Y~asKaal~~~~~sL~~El~---~~~gI~V~~v~Pg~v~T~~~~~~~~~~~----~~~~  207 (330)
T PRK06139        148 -------------AAQPYAAAYSASKFGLRGFSEALRGELA---DHPDIHVCDVYPAFMDTPGFRHGANYTG----RRLT  207 (330)
T ss_pred             -------------CCCCCchhHHHHHHHHHHHHHHHHHHhC---CCCCeEEEEEecCCccCccccccccccc----cccc
Confidence                         7778889999999999999999999997   4 59999999999999998754221100    0001


Q ss_pred             HhcCCCCHHHHHHHHHHHhcCCC
Q 017812          293 LLGLLQSPEKGINSVLDAALAPP  315 (365)
Q Consensus       293 ~~~~~~~p~e~A~~i~~~~l~~~  315 (365)
                      +...+.+|+++|+.+++++..+.
T Consensus       208 ~~~~~~~pe~vA~~il~~~~~~~  230 (330)
T PRK06139        208 PPPPVYDPRRVAKAVVRLADRPR  230 (330)
T ss_pred             CCCCCCCHHHHHHHHHHHHhCCC
Confidence            12235699999999997665443

>PRK09242 tropinone reductase; Provisional

Probab=100.00  E-value=8.2e-37  Score=276.08  Aligned_cols=244  Identities=20%  Similarity=0.256  Sum_probs=206.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++....++.++.++.+|+++++++.++++++.+ 
T Consensus         6 ~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-   84 (257)
T PRK09242          6 RLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVED-   84 (257)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH-
Confidence            4789999999999999999999999999999999999999998888887776667899999999999999999999988 


Q ss_pred             HhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                           .++++|++|||||...  +..+.+.+++++.+++|+.+++.++++++|+|++++ .++||++||.++.       
T Consensus        85 -----~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~sS~~~~-------  151 (257)
T PRK09242         85 -----HWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHA-SSAIVNIGSVSGL-------  151 (257)
T ss_pred             -----HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CceEEEECccccC-------
Confidence                 5688999999999853  345678999999999999999999999999998765 6899999999887       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHH-HHHHHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLS-LMAFTVLK  292 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~-~~~~~~~~  292 (365)
                                   .+.++...|++||++++.++++++.|+.   +.||++++|+||+++|++.+....... ........
T Consensus       152 -------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~  215 (257)
T PRK09242        152 -------------THVRSGAPYGMTKAALLQMTRNLAVEWA---EDGIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERT  215 (257)
T ss_pred             -------------CCCCCCcchHHHHHHHHHHHHHHHHHHH---HhCeEEEEEEECCCCCcccccccCChHHHHHHHhcC
Confidence                         6777888999999999999999999997   789999999999999999765322111 11122234


Q ss_pred             HhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017812          293 LLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  329 (365)
Q Consensus       293 ~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~  329 (365)
                      +++++.+|+|++.++++++... ...+|+.+..++|..
T Consensus       216 ~~~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~~gg~~  253 (257)
T PRK09242        216 PMRRVGEPEEVAAAVAFLCMPAASYITGQCIAVDGGFL  253 (257)
T ss_pred             CCCCCcCHHHHHHHHHHHhCcccccccCCEEEECCCeE
Confidence            5677889999999999655332 245788888777643

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-36  Score=275.91  Aligned_cols=244  Identities=17%  Similarity=0.271  Sum_probs=205.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++...  +.++.++++|++|.++++++++++.+ 
T Consensus         7 ~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~-   83 (265)
T PRK07097          7 SLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYREL--GIEAHGYVCDVTDEDGVQAMVSQIEK-   83 (265)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHH-
Confidence            468999999999999999999999999999999999999888888777654  45789999999999999999999987 


Q ss_pred             HhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                           ..+++|+||||||+..  +..+.+.+++++++++|+.|++.+++.++|+|.+++ .|+||++||..+.       
T Consensus        84 -----~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~-------  150 (265)
T PRK07097         84 -----EVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKG-HGKIINICSMMSE-------  150 (265)
T ss_pred             -----hCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCcccc-------
Confidence                 5688999999999864  345678899999999999999999999999998765 7899999998877       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh-----H-HHH-H
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS-----F-LSL-M  286 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~-----~-~~~-~  286 (365)
                                   .+.++...|++||++++.+++++++++.   +.||+|++|+||+++|++......     . ... .
T Consensus       151 -------------~~~~~~~~Y~~sKaal~~l~~~la~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~  214 (265)
T PRK07097        151 -------------LGRETVSAYAAAKGGLKMLTKNIASEYG---EANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQ  214 (265)
T ss_pred             -------------CCCCCCccHHHHHHHHHHHHHHHHHHhh---hcCceEEEEEeccccccchhhhhhccccccchhHHH
Confidence                         6667788999999999999999999998   789999999999999998754321     0 001 1


Q ss_pred             HHHHHHHhcCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCcccc
Q 017812          287 AFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTVN  331 (365)
Q Consensus       287 ~~~~~~~~~~~~~p~e~A~~i~~~~l~-~~~~~G~~~~~~~g~~~~  331 (365)
                      ......+.+++.+|+|+|..+++++.. ++..+|+.+..++|...+
T Consensus       215 ~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg~~~~  260 (265)
T PRK07097        215 FIIAKTPAARWGDPEDLAGPAVFLASDASNFVNGHILYVDGGILAY  260 (265)
T ss_pred             HHHhcCCccCCcCHHHHHHHHHHHhCcccCCCCCCEEEECCCceec
Confidence            112233566788999999999976654 346789999888876543

>PRK08643 acetoin reductase; Validated

Probab=100.00  E-value=9.6e-37  Score=275.45  Aligned_cols=240  Identities=24%  Similarity=0.300  Sum_probs=200.6

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhc
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  138 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~  138 (365)
                      +|+++||||++|||+++|++|+++|++|++++|+.+.+++..+++...  +.++.++++|++++++++++++++.+    
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~----   75 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKD--GGKAIAVKADVSDRDQVFAAVRQVVD----   75 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHH----
Confidence            689999999999999999999999999999999998888888887654  35788999999999999999999988    


Q ss_pred             cCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017812          139 SDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  216 (365)
Q Consensus       139 ~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~  216 (365)
                        .++++|++|||||+..  +..+.+.+++++++++|+.+++.+++.+++.|++.+..++||++||..+.          
T Consensus        76 --~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~----------  143 (256)
T PRK08643         76 --TFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGV----------  143 (256)
T ss_pred             --HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccc----------
Confidence              5688999999999853  34567889999999999999999999999999876545899999999887          


Q ss_pred             cccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH--------HH--HH
Q 017812          217 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF--------LS--LM  286 (365)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~--------~~--~~  286 (365)
                                .+.++...|++||++++.+++.++.|+.   +.||+|++|+||+++|++.......        ..  ..
T Consensus       144 ----------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~  210 (256)
T PRK08643        144 ----------VGNPELAVYSSTKFAVRGLTQTAARDLA---SEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGME  210 (256)
T ss_pred             ----------cCCCCCchhHHHHHHHHHHHHHHHHHhc---ccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHH
Confidence                      6677788999999999999999999997   7899999999999999987643211        00  11


Q ss_pred             HHHHHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017812          287 AFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  329 (365)
Q Consensus       287 ~~~~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~  329 (365)
                      ......+.+++.+|+|+|+.+++++... ...+|+.+..++|..
T Consensus       211 ~~~~~~~~~~~~~~~~va~~~~~L~~~~~~~~~G~~i~vdgg~~  254 (256)
T PRK08643        211 QFAKDITLGRLSEPEDVANCVSFLAGPDSDYITGQTIIVDGGMV  254 (256)
T ss_pred             HHhccCCCCCCcCHHHHHHHHHHHhCccccCccCcEEEeCCCee
Confidence            1122235678889999999999544322 256899999888753

>PRK05872 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.1e-37  Score=282.53  Aligned_cols=226  Identities=23%  Similarity=0.335  Sum_probs=191.8

Q ss_pred             CCCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHH
Q 017812           53 PITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  132 (365)
Q Consensus        53 ~~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~  132 (365)
                      ++.+++||+++||||++|||+++|++|+++|++|++++|+.++++++.+++..   +.++..+++|++|.++++++++++
T Consensus         3 ~~~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~---~~~~~~~~~Dv~d~~~v~~~~~~~   79 (296)
T PRK05872          3 PMTSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG---DDRVLTVVADVTDLAAMQAAAEEA   79 (296)
T ss_pred             CCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC---CCcEEEEEecCCCHHHHHHHHHHH
Confidence            34568899999999999999999999999999999999999988888777632   356778889999999999999999


Q ss_pred             HHHHhccCCCCCeeEEEecCCcc--cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc
Q 017812          133 QQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN  210 (365)
Q Consensus       133 ~~~~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~  210 (365)
                      .+      .++++|++|||||+.  .+..+.+.+++++++++|+.|++++++.++|+|.++  .|+||++||.++.    
T Consensus        80 ~~------~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~--~g~iv~isS~~~~----  147 (296)
T PRK05872         80 VE------RFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIER--RGYVLQVSSLAAF----  147 (296)
T ss_pred             HH------HcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCEEEEEeCHhhc----
Confidence            87      568899999999986  345678899999999999999999999999999875  3899999999988    


Q ss_pred             ccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHH-HHH
Q 017812          211 AQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLM-AFT  289 (365)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~-~~~  289 (365)
                                      .+.++...|++||+++++|+++++.|+.   ..||+|++++||+++|++.+......... ...
T Consensus       148 ----------------~~~~~~~~Y~asKaal~~~~~~l~~e~~---~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~  208 (296)
T PRK05872        148 ----------------AAAPGMAAYCASKAGVEAFANALRLEVA---HHGVTVGSAYLSWIDTDLVRDADADLPAFRELR  208 (296)
T ss_pred             ----------------CCCCCchHHHHHHHHHHHHHHHHHHHHH---HHCcEEEEEecCcccchhhhhccccchhHHHHH
Confidence                            7778889999999999999999999998   78999999999999999977543221111 111


Q ss_pred             H--HHHhcCCCCHHHHHHHHHHHhc
Q 017812          290 V--LKLLGLLQSPEKGINSVLDAAL  312 (365)
Q Consensus       290 ~--~~~~~~~~~p~e~A~~i~~~~l  312 (365)
                      .  ..|+++..+|+|+|+.+++++.
T Consensus       209 ~~~~~p~~~~~~~~~va~~i~~~~~  233 (296)
T PRK05872        209 ARLPWPLRRTTSVEKCAAAFVDGIE  233 (296)
T ss_pred             hhCCCcccCCCCHHHHHHHHHHHHh
Confidence            1  1245677899999999996553

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=100.00  E-value=9.1e-37  Score=274.23  Aligned_cols=241  Identities=24%  Similarity=0.288  Sum_probs=195.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      ++++|+++||||++|||+++|++|+++|++|++++|+..  ++..+.+.+.  +.++.++++|+++.+++.++++++.+ 
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~--~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~-   76 (248)
T TIGR01832         2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEP--SETQQQVEAL--GRRFLSLTADLSDIEAIKALVDSAVE-   76 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchH--HHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHH-
Confidence            368999999999999999999999999999999999753  3444444433  45788999999999999999999887 


Q ss_pred             HhccCCCCCeeEEEecCCcccC--CCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGILAT--SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~~--~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                           ..+++|++|||||...+  ..+.+.+++++.+++|+.+++.++++++|.|.+++..|+||++||..+.       
T Consensus        77 -----~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~-------  144 (248)
T TIGR01832        77 -----EFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSF-------  144 (248)
T ss_pred             -----HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhc-------
Confidence                 56789999999998643  3466789999999999999999999999999765435899999999877       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHH-HHHHHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLS-LMAFTVLK  292 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~-~~~~~~~~  292 (365)
                                   .+.+....|++||+|++++++++++|+.   ++||+|++|+||+++|++.+....... ........
T Consensus       145 -------------~~~~~~~~Y~~sKaa~~~~~~~la~e~~---~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~  208 (248)
T TIGR01832       145 -------------QGGIRVPSYTASKHGVAGLTKLLANEWA---AKGINVNAIAPGYMATNNTQALRADEDRNAAILERI  208 (248)
T ss_pred             -------------cCCCCCchhHHHHHHHHHHHHHHHHHhC---ccCcEEEEEEECcCcCcchhccccChHHHHHHHhcC
Confidence                         5566677899999999999999999997   789999999999999998764322111 11122234


Q ss_pred             HhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017812          293 LLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  329 (365)
Q Consensus       293 ~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~  329 (365)
                      |.+++.+|+|+|+++++++... ...+|+++..|+|..
T Consensus       209 ~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~  246 (248)
T TIGR01832       209 PAGRWGTPDDIGGPAVFLASSASDYVNGYTLAVDGGWL  246 (248)
T ss_pred             CCCCCcCHHHHHHHHHHHcCccccCcCCcEEEeCCCEe
Confidence            5678899999999999644321 245799998888753

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-36  Score=274.19  Aligned_cols=243  Identities=18%  Similarity=0.252  Sum_probs=204.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      ++++|+++||||++|||+++|++|+++|++|++++|+++++++..+.+...  +.++..+++|++|.++++++++++.+ 
T Consensus         7 ~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~-   83 (255)
T PRK07523          7 DLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQ--GLSAHALAFDVTDHDAVRAAIDAFEA-   83 (255)
T ss_pred             CCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CceEEEEEccCCCHHHHHHHHHHHHH-
Confidence            578999999999999999999999999999999999998888887777654  45788999999999999999999887 


Q ss_pred             HhccCCCCCeeEEEecCCcc--cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                           ..+++|++|||||..  .+..+.+.+++++++++|+.+++.+++++.+.|.+++ .|+||++||..+.       
T Consensus        84 -----~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~-------  150 (255)
T PRK07523         84 -----EIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARG-AGKIINIASVQSA-------  150 (255)
T ss_pred             -----hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhC-CeEEEEEccchhc-------
Confidence                 668999999999986  3445678999999999999999999999999998765 6899999998876       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh-HHHHHHHHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS-FLSLMAFTVLK  292 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~-~~~~~~~~~~~  292 (365)
                                   .+.++...|+++|++++.++++++.|+.   ++||+|++|+||+++|++.+.... ...........
T Consensus       151 -------------~~~~~~~~y~~sK~a~~~~~~~~a~e~~---~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~  214 (255)
T PRK07523        151 -------------LARPGIAPYTATKGAVGNLTKGMATDWA---KHGLQCNAIAPGYFDTPLNAALVADPEFSAWLEKRT  214 (255)
T ss_pred             -------------cCCCCCccHHHHHHHHHHHHHHHHHHhh---HhCeEEEEEEECcccCchhhhhccCHHHHHHHHhcC
Confidence                         6677888999999999999999999998   789999999999999998754321 11111122334


Q ss_pred             HhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017812          293 LLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  330 (365)
Q Consensus       293 ~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~  330 (365)
                      |++++.+|+|+|..+++++... ...+|+.+..++|...
T Consensus       215 ~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~~~gg~~~  253 (255)
T PRK07523        215 PAGRWGKVEELVGACVFLASDASSFVNGHVLYVDGGITA  253 (255)
T ss_pred             CCCCCcCHHHHHHHHHHHcCchhcCccCcEEEECCCeec
Confidence            6778899999999999544321 2457999888888643

>PRK05876 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.1e-37  Score=279.08  Aligned_cols=228  Identities=19%  Similarity=0.246  Sum_probs=191.3

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.++++++.+++...  +.++.++++|++|.+++.++++++.+
T Consensus         2 ~~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~   79 (275)
T PRK05876          2 DGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAE--GFDVHGVMCDVRHREEVTHLADEAFR   79 (275)
T ss_pred             CCcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999999988888888654  45788999999999999999999887


Q ss_pred             HHhccCCCCCeeEEEecCCcc--cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017812          135 WLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~  212 (365)
                            .++++|+||||||+.  .+..+.+.+++++++++|+.|++.+++.++|.|.+++..|+||++||.++.      
T Consensus        80 ------~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~------  147 (275)
T PRK05876         80 ------LLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGL------  147 (275)
T ss_pred             ------HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhc------
Confidence                  568999999999985  345677899999999999999999999999999876545899999999988      


Q ss_pred             CCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHH---HH---
Q 017812          213 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLS---LM---  286 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~---~~---  286 (365)
                                    .+.++...|++||+|+.+|+++|+.|+.   ..||+|++|+||+++|++..+......   ..   
T Consensus       148 --------------~~~~~~~~Y~asK~a~~~~~~~l~~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~  210 (275)
T PRK05876        148 --------------VPNAGLGAYGVAKYGVVGLAETLAREVT---ADGIGVSVLCPMVVETNLVANSERIRGAACAQSST  210 (275)
T ss_pred             --------------cCCCCCchHHHHHHHHHHHHHHHHHHhh---hcCcEEEEEEeCccccccccchhhhcCcccccccc
Confidence                          7788889999999999999999999997   789999999999999998654311100   00   


Q ss_pred             --HHHHHHHhcCCCCHHHHHHHHHHHhcC
Q 017812          287 --AFTVLKLLGLLQSPEKGINSVLDAALA  313 (365)
Q Consensus       287 --~~~~~~~~~~~~~p~e~A~~i~~~~l~  313 (365)
                        ..........+.+|+++|+.++.++..
T Consensus       211 ~~~~~~~~~~~~~~~~~dva~~~~~ai~~  239 (275)
T PRK05876        211 TGSPGPLPLQDDNLGVDDIAQLTADAILA  239 (275)
T ss_pred             ccccccccccccCCCHHHHHHHHHHHHHc
Confidence              000001112356999999999987654

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=100.00  E-value=6.4e-38  Score=262.78  Aligned_cols=238  Identities=21%  Similarity=0.286  Sum_probs=201.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      +++||.|++||+.||||++++++|+++|..+.++..+.|. -+...++++.+|..++.+++||+++..++++.++++.+ 
T Consensus         2 ~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En-~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~-   79 (261)
T KOG4169|consen    2 DLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEEN-PEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILA-   79 (261)
T ss_pred             cccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhC-HHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHH-
Confidence            4679999999999999999999999999988888887776 56677888999999999999999999999999999998 


Q ss_pred             HhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCC--CCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP--VPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~--~~g~iV~vsS~~~~~~~~~~~  213 (365)
                           .++.||++|||||+..      ..+||+++.||+.|.+.-+..++|+|.++.  .+|-|||+||..|.       
T Consensus        80 -----~fg~iDIlINgAGi~~------dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL-------  141 (261)
T KOG4169|consen   80 -----TFGTIDILINGAGILD------DKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGL-------  141 (261)
T ss_pred             -----HhCceEEEEccccccc------chhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEecccccc-------
Confidence                 7799999999999954      567999999999999999999999998775  57899999999999       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHH-------HH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLS-------LM  286 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~-------~~  286 (365)
                                   .|.|-.+.|++||+++.+|+|+|+..... ...||+++++|||+++|.+.+++.....       ..
T Consensus       142 -------------~P~p~~pVY~AsKaGVvgFTRSla~~ayy-~~sGV~~~avCPG~t~t~l~~~~~~~~~~~e~~~~~~  207 (261)
T KOG4169|consen  142 -------------DPMPVFPVYAASKAGVVGFTRSLADLAYY-QRSGVRFNAVCPGFTRTDLAENIDASGGYLEYSDSIK  207 (261)
T ss_pred             -------------CccccchhhhhcccceeeeehhhhhhhhH-hhcCEEEEEECCCcchHHHHHHHHhcCCcccccHHHH
Confidence                         89999999999999999999999887653 2579999999999999999877633111       11


Q ss_pred             HHHHHHHhcCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccccCC
Q 017812          287 AFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSS  333 (365)
Q Consensus       287 ~~~~~~~~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~~~~  333 (365)
                      ......   .-.+|.++|..++.+.-.  ..+|..|..+.|+ +++.
T Consensus       208 ~~l~~~---~~q~~~~~a~~~v~aiE~--~~NGaiw~v~~g~-l~~~  248 (261)
T KOG4169|consen  208 EALERA---PKQSPACCAINIVNAIEY--PKNGAIWKVDSGS-LEPV  248 (261)
T ss_pred             HHHHHc---ccCCHHHHHHHHHHHHhh--ccCCcEEEEecCc-EEEe
Confidence            111111   135999999999986654  5578999888887 4443

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-36  Score=273.90  Aligned_cols=241  Identities=21%  Similarity=0.247  Sum_probs=200.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      .+.+|+++||||++|||+++|++|+++|++|++++|+.++.++..+++     +.++.++++|++|.+++.++++++.+ 
T Consensus         3 ~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~-   76 (257)
T PRK07067          3 RLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI-----GPAAIAVSLDVTRQDSIDRIVAAAVE-   76 (257)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHh-----CCceEEEEccCCCHHHHHHHHHHHHH-
Confidence            367899999999999999999999999999999999998877766655     34588999999999999999999988 


Q ss_pred             HhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                           ..+++|++|||||...  +..+.+.+++++++++|+.+++.++++++|.|.+++..|+||++||..+.       
T Consensus        77 -----~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~-------  144 (257)
T PRK07067         77 -----RFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGR-------  144 (257)
T ss_pred             -----HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhC-------
Confidence                 5688999999999863  44567889999999999999999999999999776435899999998877       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh----------HH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS----------FL  283 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~----------~~  283 (365)
                                   .+.++...|++||++++.++++++.|+.   +.||++++|+||+++|++.+....          ..
T Consensus       145 -------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~  208 (257)
T PRK07067        145 -------------RGEALVSHYCATKAAVISYTQSAALALI---RHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGE  208 (257)
T ss_pred             -------------CCCCCCchhhhhHHHHHHHHHHHHHHhc---ccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHH
Confidence                         6777889999999999999999999998   789999999999999998653211          01


Q ss_pred             HHHHHHHHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017812          284 SLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  330 (365)
Q Consensus       284 ~~~~~~~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~  330 (365)
                      .........|++++.+|+|+|+.+++++... ...+|+.+..++|+.+
T Consensus       209 ~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg~~~  256 (257)
T PRK07067        209 KKRLVGEAVPLGRMGVPDDLTGMALFLASADADYIVAQTYNVDGGNWM  256 (257)
T ss_pred             HHHHHhhcCCCCCccCHHHHHHHHHHHhCcccccccCcEEeecCCEeC
Confidence            1111112236778899999999999555432 2457899998988654

>PRK06125 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-36  Score=273.64  Aligned_cols=239  Identities=25%  Similarity=0.262  Sum_probs=197.7

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      +++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.... +.++.++.+|++|++++++++++     
T Consensus         5 ~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~-----   78 (259)
T PRK06125          5 LAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAH-GVDVAVHALDLSSPEAREQLAAE-----   78 (259)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhc-CCceEEEEecCCCHHHHHHHHHH-----
Confidence            678999999999999999999999999999999999998888888876554 45788999999999999887753     


Q ss_pred             hccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017812          137 LDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  214 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~  214 (365)
                           .+++|++|||||+..  +..+.+.++|++++++|+.++++++++++|.|.+++ .|+||++||..+.        
T Consensus        79 -----~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~iss~~~~--------  144 (259)
T PRK06125         79 -----AGDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARG-SGVIVNVIGAAGE--------  144 (259)
T ss_pred             -----hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEecCcccc--------
Confidence                 367999999999863  455778999999999999999999999999998765 5899999998877        


Q ss_pred             CccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccch---------hHHHH
Q 017812          215 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP---------SFLSL  285 (365)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~---------~~~~~  285 (365)
                                  .+.+.+..|++||+|+++|+++++.|+.   +.||+||+|+||+++|++.....         .....
T Consensus       145 ------------~~~~~~~~y~ask~al~~~~~~la~e~~---~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~  209 (259)
T PRK06125        145 ------------NPDADYICGSAGNAALMAFTRALGGKSL---DDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRW  209 (259)
T ss_pred             ------------CCCCCchHhHHHHHHHHHHHHHHHHHhC---ccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHH
Confidence                        6677788999999999999999999997   78999999999999999754321         01111


Q ss_pred             HHHHHHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017812          286 MAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  330 (365)
Q Consensus       286 ~~~~~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~  330 (365)
                      .......|.+++.+|+|+|+.+++++... ...+|+.+..++|...
T Consensus       210 ~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~i~vdgg~~~  255 (259)
T PRK06125        210 QELLAGLPLGRPATPEEVADLVAFLASPRSGYTSGTVVTVDGGISA  255 (259)
T ss_pred             HHHhccCCcCCCcCHHHHHHHHHHHcCchhccccCceEEecCCeee
Confidence            11222235678889999999999544221 2568999998988654

>PRK06841 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-36  Score=272.56  Aligned_cols=241  Identities=23%  Similarity=0.251  Sum_probs=198.3

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      .++++|+++||||++|||.++|++|+++|++|++++|+.+.. +..+++.    +.++..+++|+++++++.++++++.+
T Consensus        11 ~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~-~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~~~   85 (255)
T PRK06841         11 FDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVA-EVAAQLL----GGNAKGLVCDVSDSQSVEAAVAAVIS   85 (255)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHhh----CCceEEEEecCCCHHHHHHHHHHHHH
Confidence            357899999999999999999999999999999999987642 2233331    34677999999999999999999887


Q ss_pred             HHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017812          135 WLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~  212 (365)
                            .++++|++|||||...  +..+.+.+++++++++|+.|++.+++.+.|.|.+++ .++||++||..+.      
T Consensus        86 ------~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~------  152 (255)
T PRK06841         86 ------AFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAG-GGKIVNLASQAGV------  152 (255)
T ss_pred             ------HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcC-CceEEEEcchhhc------
Confidence                  5578999999999863  344668899999999999999999999999998765 6899999999887      


Q ss_pred             CCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHH
Q 017812          213 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLK  292 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~  292 (365)
                                    .+.+....|++||+|++.++++++.|+.   +.||+|++|+||+|+|++.+...............
T Consensus       153 --------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~  215 (255)
T PRK06841        153 --------------VALERHVAYCASKAGVVGMTKVLALEWG---PYGITVNAISPTVVLTELGKKAWAGEKGERAKKLI  215 (255)
T ss_pred             --------------cCCCCCchHHHHHHHHHHHHHHHHHHHH---hhCeEEEEEEeCcCcCcccccccchhHHHHHHhcC
Confidence                          6777888999999999999999999998   78999999999999999876432211111222334


Q ss_pred             HhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017812          293 LLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  330 (365)
Q Consensus       293 ~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~  330 (365)
                      |.+++.+|+|+|+.+++++... ...+|+.+..++|..+
T Consensus       216 ~~~~~~~~~~va~~~~~l~~~~~~~~~G~~i~~dgg~~~  254 (255)
T PRK06841        216 PAGRFAYPEEIAAAALFLASDAAAMITGENLVIDGGYTI  254 (255)
T ss_pred             CCCCCcCHHHHHHHHHHHcCccccCccCCEEEECCCccC
Confidence            6678899999999999654332 3568999999988754

>PRK05599 hypothetical protein; Provisional

Probab=100.00  E-value=2.3e-36  Score=271.46  Aligned_cols=220  Identities=20%  Similarity=0.277  Sum_probs=185.1

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhcc
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  139 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~  139 (365)
                      ++++||||++|||+++|++|+ +|++|++++|+.++++++.+++++.+ ...+.+++||++|+++++++++++.+     
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~-----   73 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRG-ATSVHVLSFDAQDLDTHRELVKQTQE-----   73 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcc-CCceEEEEcccCCHHHHHHHHHHHHH-----
Confidence            479999999999999999999 59999999999999999999887653 33578999999999999999999987     


Q ss_pred             CCCCCeeEEEecCCcccCC--CCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcc
Q 017812          140 DMHSSIQLLINNAGILATS--SRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNET  217 (365)
Q Consensus       140 ~~~~~id~lv~nAG~~~~~--~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~  217 (365)
                       .++++|++|||||+..+.  .+.+.+.+++++++|+.+++.+++.++|.|.+++..|+||++||.++.           
T Consensus        74 -~~g~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~-----------  141 (246)
T PRK05599         74 -LAGEISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGW-----------  141 (246)
T ss_pred             -hcCCCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccc-----------
Confidence             568999999999986432  345667788899999999999999999999875435899999999988           


Q ss_pred             ccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhcCC
Q 017812          218 ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLL  297 (365)
Q Consensus       218 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  297 (365)
                               .+.++...|++||+|+++|+++++.|+.   +.||+|++++||+|+|++.....+.            ...
T Consensus       142 ---------~~~~~~~~Y~asKaa~~~~~~~la~el~---~~~I~v~~v~PG~v~T~~~~~~~~~------------~~~  197 (246)
T PRK05599        142 ---------RARRANYVYGSTKAGLDAFCQGLADSLH---GSHVRLIIARPGFVIGSMTTGMKPA------------PMS  197 (246)
T ss_pred             ---------cCCcCCcchhhHHHHHHHHHHHHHHHhc---CCCceEEEecCCcccchhhcCCCCC------------CCC
Confidence                     6777888999999999999999999998   7899999999999999987543211            112


Q ss_pred             CCHHHHHHHHHHHhcCCCCCcccEEe
Q 017812          298 QSPEKGINSVLDAALAPPETSGVYFF  323 (365)
Q Consensus       298 ~~p~e~A~~i~~~~l~~~~~~G~~~~  323 (365)
                      .+|||+|+.+++++..+.. ++.++.
T Consensus       198 ~~pe~~a~~~~~~~~~~~~-~~~~~~  222 (246)
T PRK05599        198 VYPRDVAAAVVSAITSSKR-STTLWI  222 (246)
T ss_pred             CCHHHHHHHHHHHHhcCCC-CceEEe
Confidence            5899999999976654332 334444

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-36  Score=272.93  Aligned_cols=238  Identities=21%  Similarity=0.254  Sum_probs=190.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      .+++|+++||||++|||+++|++|+++|++|++++|+. ..++..+++...  +.++.++++|++|.+++.++++++.+ 
T Consensus         5 ~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~-~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~-   80 (260)
T PRK12823          5 RFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSE-LVHEVAAELRAA--GGEALALTADLETYAGAQAAMAAAVE-   80 (260)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCch-HHHHHHHHHHhc--CCeEEEEEEeCCCHHHHHHHHHHHHH-
Confidence            37899999999999999999999999999999999985 344555666443  45788999999999999999999987 


Q ss_pred             HhccCCCCCeeEEEecCCcc---cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017812          136 LLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~---~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~  212 (365)
                           .++++|+||||||..   .+..+.+.+++++.+++|+.+++++++.++|.|.+++ .|+||++||.++.      
T Consensus        81 -----~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~------  148 (260)
T PRK12823         81 -----AFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQG-GGAIVNVSSIATR------  148 (260)
T ss_pred             -----HcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEEcCcccc------
Confidence                 568899999999964   4556778999999999999999999999999998765 6899999998754      


Q ss_pred             CCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccch------h----H
Q 017812          213 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP------S----F  282 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~------~----~  282 (365)
                                    .  ++..+|++||+|++.|+++++.|+.   +.||+|++|+||+|.|++.....      .    .
T Consensus       149 --------------~--~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~  209 (260)
T PRK12823        149 --------------G--INRVPYSAAKGGVNALTASLAFEYA---EHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAW  209 (260)
T ss_pred             --------------C--CCCCccHHHHHHHHHHHHHHHHHhc---ccCcEEEEEecCccCCcchhhHHhhcccccccccc
Confidence                          1  2345799999999999999999998   78999999999999998632100      0    0


Q ss_pred             HH-H-HHHHHHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCc
Q 017812          283 LS-L-MAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  328 (365)
Q Consensus       283 ~~-~-~~~~~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~  328 (365)
                      .. . .......|++++.+|+|+|+++++++... ...+|+.+..++|+
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg~  258 (260)
T PRK12823        210 YQQIVDQTLDSSLMKRYGTIDEQVAAILFLASDEASYITGTVLPVGGGD  258 (260)
T ss_pred             HHHHHHHHhccCCcccCCCHHHHHHHHHHHcCcccccccCcEEeecCCC
Confidence            00 0 01112246678889999999999543221 23579998888776

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=100.00  E-value=5.4e-37  Score=278.10  Aligned_cols=235  Identities=22%  Similarity=0.228  Sum_probs=190.3

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      +++|+++||||++|||+++|++|+++|++|++++|+.++++++.+.    . +.++..+++|++|.+++.++++++.+  
T Consensus         3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~----~-~~~~~~~~~D~~~~~~~~~~~~~~~~--   75 (262)
T TIGR03325         3 LKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAA----H-GDAVVGVEGDVRSLDDHKEAVARCVA--   75 (262)
T ss_pred             cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhh----c-CCceEEEEeccCCHHHHHHHHHHHHH--
Confidence            6789999999999999999999999999999999998776665432    1 34688999999999999999999887  


Q ss_pred             hccCCCCCeeEEEecCCccc---CCCCCCH----HHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccc
Q 017812          137 LDSDMHSSIQLLINNAGILA---TSSRLTP----EGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVF  209 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~---~~~~~~~----~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~  209 (365)
                          .++++|+||||||+..   +..+.+.    ++|++++++|+.+++.++++++|.|.+++  |+||+++|..+.   
T Consensus        76 ----~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--g~iv~~sS~~~~---  146 (262)
T TIGR03325        76 ----AFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASR--GSVIFTISNAGF---  146 (262)
T ss_pred             ----HhCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcC--CCEEEEecccee---
Confidence                5688999999999753   2223332    57999999999999999999999997653  899999998887   


Q ss_pred             cccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc----hhH---
Q 017812          210 NAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV----PSF---  282 (365)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~----~~~---  282 (365)
                                       .+.++...|++||+|+++|+++++.|++   +. |+||+|+||+++|++....    ...   
T Consensus       147 -----------------~~~~~~~~Y~~sKaa~~~l~~~la~e~~---~~-irvn~i~PG~i~t~~~~~~~~~~~~~~~~  205 (262)
T TIGR03325       147 -----------------YPNGGGPLYTAAKHAVVGLVKELAFELA---PY-VRVNGVAPGGMSSDLRGPKSLGMADKSIS  205 (262)
T ss_pred             -----------------cCCCCCchhHHHHHHHHHHHHHHHHhhc---cC-eEEEEEecCCCcCCCcccccccccccccc
Confidence                             6667778999999999999999999997   55 9999999999999986431    000   


Q ss_pred             --HHHHHHHHHHHhcCCCCHHHHHHHHHHHhcCCC----CCcccEEeCCCCccc
Q 017812          283 --LSLMAFTVLKLLGLLQSPEKGINSVLDAALAPP----ETSGVYFFGGKGRTV  330 (365)
Q Consensus       283 --~~~~~~~~~~~~~~~~~p~e~A~~i~~~~l~~~----~~~G~~~~~~~g~~~  330 (365)
                        ..........|++|+.+|+|+|+.++  ++.++    ..+|+.+..|+|..+
T Consensus       206 ~~~~~~~~~~~~p~~r~~~p~eva~~~~--~l~s~~~~~~~tG~~i~vdgg~~~  257 (262)
T TIGR03325       206 TVPLGDMLKSVLPIGRMPDAEEYTGAYV--FFATRGDTVPATGAVLNYDGGMGV  257 (262)
T ss_pred             ccchhhhhhhcCCCCCCCChHHhhhhee--eeecCCCcccccceEEEecCCeee
Confidence              00111122347889999999999999  45443    348999988887544

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK07677 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4e-36  Score=270.82  Aligned_cols=243  Identities=21%  Similarity=0.257  Sum_probs=197.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhc
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  138 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~  138 (365)
                      ||+++||||++|||++++++|+++|++|++++|+.++++++.+++...  +.++.++++|++|+++++++++++.+    
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~----   74 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQF--PGQVLTVQMDVRNPEDVQKMVEQIDE----   74 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHH----
Confidence            589999999999999999999999999999999998888887777654  35788999999999999999999987    


Q ss_pred             cCCCCCeeEEEecCCcc--cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017812          139 SDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  216 (365)
Q Consensus       139 ~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~  216 (365)
                        .++++|++|||||..  .+..+.+.++|++++++|+.|+++++++++|+|.+.+..|+||++||..+.          
T Consensus        75 --~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~----------  142 (252)
T PRK07677         75 --KFGRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAW----------  142 (252)
T ss_pred             --HhCCccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhc----------
Confidence              567899999999974  344577899999999999999999999999998765435899999999887          


Q ss_pred             cccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCC-ccccch-hHHHHHHHHHHHHh
Q 017812          217 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTN-IMREVP-SFLSLMAFTVLKLL  294 (365)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~-~~~~~~-~~~~~~~~~~~~~~  294 (365)
                                .+.+...+|++||+|+++|+++|+.|+.  ...||++++|+||+++|+ +..... ............++
T Consensus       143 ----------~~~~~~~~Y~~sKaa~~~~~~~la~e~~--~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~~~~  210 (252)
T PRK07677        143 ----------DAGPGVIHSAAAKAGVLAMTRTLAVEWG--RKYGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVPL  210 (252)
T ss_pred             ----------cCCCCCcchHHHHHHHHHHHHHHHHHhC--cccCeEEEEEeecccccccccccccCCHHHHHHHhccCCC
Confidence                      5667778999999999999999999996  136999999999999954 332211 11111111122356


Q ss_pred             cCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcccc
Q 017812          295 GLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVN  331 (365)
Q Consensus       295 ~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~~  331 (365)
                      +++.+|+|+|+.+.+++... ...+|+.+..++|....
T Consensus       211 ~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~gg~~~~  248 (252)
T PRK07677        211 GRLGTPEEIAGLAYFLLSDEAAYINGTCITMDGGQWLN  248 (252)
T ss_pred             CCCCCHHHHHHHHHHHcCccccccCCCEEEECCCeecC
Confidence            78899999999999654332 35789998888886553

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=8e-37  Score=280.01  Aligned_cols=243  Identities=12%  Similarity=0.127  Sum_probs=181.5

Q ss_pred             CCCCCCEEEEecCC--ChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhh--------cCCC-----ceEEEEecC
Q 017812           55 TGIKRPVCIVTGAT--SGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSR--------NKDA-----RLEAFQVDL  119 (365)
Q Consensus        55 ~~~~~k~vlITGas--sGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~--------~~~~-----~~~~~~~Dl  119 (365)
                      .+++||+++||||+  +|||+++|+.|+++|++|++.++. +.++...+.....        ..+.     ++..+.+|+
T Consensus         4 ~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~   82 (299)
T PRK06300          4 IDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWV-PIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASF   82 (299)
T ss_pred             cCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEecc-chhhhhhhhcccccccccccccccchhhhhhHHHhhhhc
Confidence            35789999999995  999999999999999999998765 2122221111100        0011     112233444


Q ss_pred             CChh------------------hHHHHHHHHHHHHhccCCCCCeeEEEecCCcc----cCCCCCCHHHHhHhHHHHhHHH
Q 017812          120 SSFQ------------------SVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL----ATSSRLTPEGYDQMMSTNYIGA  177 (365)
Q Consensus       120 s~~~------------------~v~~~~~~~~~~~~~~~~~~~id~lv~nAG~~----~~~~~~~~~~~~~~~~vN~~~~  177 (365)
                      ++.+                  +++++++++.+      .++++|+||||||..    .+..+++.++|++++++|+.|+
T Consensus        83 ~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~------~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~  156 (299)
T PRK06300         83 DTPEDVPEEIRENKRYKDLSGYTISEVAEQVKK------DFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSF  156 (299)
T ss_pred             CCCEEeecccCccccccCCCHHHHHHHHHHHHH------HcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHH
Confidence            4443                  58899999888      678999999999864    3456789999999999999999


Q ss_pred             HHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCccccccccccCCCCChhh-hhhhhHHHHHHHHHHHHHHhCCC
Q 017812          178 FFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCAR-IYEYSKLCLLIFSYELHRNLGLD  256 (365)
Q Consensus       178 ~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Y~~sK~a~~~~~~~la~e~~~~  256 (365)
                      ++++++++|+|++   .|+||++||.++.                    .+.+++. .|++||+|+++|+++|+.|++  
T Consensus       157 ~~l~~a~~p~m~~---~G~ii~iss~~~~--------------------~~~p~~~~~Y~asKaAl~~lt~~la~el~--  211 (299)
T PRK06300        157 VSLLSHFGPIMNP---GGSTISLTYLASM--------------------RAVPGYGGGMSSAKAALESDTKVLAWEAG--  211 (299)
T ss_pred             HHHHHHHHHHhhc---CCeEEEEeehhhc--------------------CcCCCccHHHHHHHHHHHHHHHHHHHHhC--
Confidence            9999999999975   3799999998887                    5666654 899999999999999999997  


Q ss_pred             CC-CCeEEEEecCCcccCCccccchhH-HHHHHHHHHHHhcCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCccc
Q 017812          257 KS-RHVSVIAADPGVVKTNIMREVPSF-LSLMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTV  330 (365)
Q Consensus       257 ~~-~gi~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~~p~e~A~~i~~~~l~-~~~~~G~~~~~~~g~~~  330 (365)
                       + .||+||+|+||+++|++....... ..........|+++..+|+|+|..+++++.. ....+|+.+..++|...
T Consensus       212 -~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~~  287 (299)
T PRK06300        212 -RRWGIRVNTISAGPLASRAGKAIGFIERMVDYYQDWAPLPEPMEAEQVGAAAAFLVSPLASAITGETLYVDHGANV  287 (299)
T ss_pred             -CCCCeEEEEEEeCCccChhhhcccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCcce
Confidence             5 499999999999999987543211 1111112224567888999999999954422 12568998888887543

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.6e-36  Score=272.53  Aligned_cols=239  Identities=28%  Similarity=0.339  Sum_probs=192.0

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      +++|+++||||++|||+++|++|+++|++|++++++.+..   .+++...    .+.++++|++|+++++++++++.+  
T Consensus         5 l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~---~~~l~~~----~~~~~~~Dl~~~~~~~~~~~~~~~--   75 (255)
T PRK06463          5 FKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENE---AKELREK----GVFTIKCDVGNRDQVKKSKEVVEK--   75 (255)
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHH---HHHHHhC----CCeEEEecCCCHHHHHHHHHHHHH--
Confidence            6789999999999999999999999999999987765432   2233222    467899999999999999999988  


Q ss_pred             hccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017812          137 LDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  214 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~  214 (365)
                          .++++|+||||||+..  +..+.+.+++++++++|+.|++++++.++|.|++++ .|+||++||.++..       
T Consensus        76 ----~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~g~iv~isS~~~~~-------  143 (255)
T PRK06463         76 ----EFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSK-NGAIVNIASNAGIG-------  143 (255)
T ss_pred             ----HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHHhCC-------
Confidence                5688999999999863  445678999999999999999999999999998665 68999999988761       


Q ss_pred             CccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccch--hH--HHHHHHHH
Q 017812          215 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP--SF--LSLMAFTV  290 (365)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~--~~--~~~~~~~~  290 (365)
                                  .+.++...|++||+|+++|+++++.|+.   +.||+|++|+||+++|++.....  ..  ........
T Consensus       144 ------------~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~  208 (255)
T PRK06463        144 ------------TAAEGTTFYAITKAGIIILTRRLAFELG---KYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRN  208 (255)
T ss_pred             ------------CCCCCccHhHHHHHHHHHHHHHHHHHhh---hcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHh
Confidence                        2345667899999999999999999998   78999999999999999874321  11  11111222


Q ss_pred             HHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcccc
Q 017812          291 LKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVN  331 (365)
Q Consensus       291 ~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~~  331 (365)
                      ..+++++.+|+|+|+.+++++... ...+|+.+..++|+.-+
T Consensus       209 ~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~~dgg~~~~  250 (255)
T PRK06463        209 KTVLKTTGKPEDIANIVLFLASDDARYITGQVIVADGGRIDN  250 (255)
T ss_pred             CCCcCCCcCHHHHHHHHHHHcChhhcCCCCCEEEECCCeeec
Confidence            345678889999999999644322 25689999999887754

>PRK12743 oxidoreductase; Provisional

Probab=100.00  E-value=5.6e-36  Score=270.55  Aligned_cols=241  Identities=23%  Similarity=0.239  Sum_probs=200.6

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEec-CchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGR-SSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      +|+++||||++|||+++|++|+++|++|+++++ +.+.++++.+++...  +.+++++++|++|+++++++++++.+   
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~---   76 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSH--GVRAEIRQLDLSDLPEGAQALDKLIQ---   76 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHH---
Confidence            589999999999999999999999999998865 556677777777654  45789999999999999999999988   


Q ss_pred             ccCCCCCeeEEEecCCcccC--CCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCC
Q 017812          138 DSDMHSSIQLLINNAGILAT--SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNN  215 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~--~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~  215 (365)
                         .++++|++|||||....  ..+.+.+++++++++|+.+++.+++++.++|.+++..|+||++||..+.         
T Consensus        77 ---~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~---------  144 (256)
T PRK12743         77 ---RLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEH---------  144 (256)
T ss_pred             ---HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeecccc---------
Confidence               56889999999998643  3466889999999999999999999999999775445899999998876         


Q ss_pred             ccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhc
Q 017812          216 ETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLG  295 (365)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  295 (365)
                                 .+.++...|+++|+++++++++++.++.   .+||++++|+||+++|++.+..+... ........+.+
T Consensus       145 -----------~~~~~~~~Y~~sK~a~~~l~~~la~~~~---~~~i~v~~v~Pg~~~t~~~~~~~~~~-~~~~~~~~~~~  209 (256)
T PRK12743        145 -----------TPLPGASAYTAAKHALGGLTKAMALELV---EHGILVNAVAPGAIATPMNGMDDSDV-KPDSRPGIPLG  209 (256)
T ss_pred             -----------CCCCCcchhHHHHHHHHHHHHHHHHHhh---hhCeEEEEEEeCCccCccccccChHH-HHHHHhcCCCC
Confidence                       6778889999999999999999999998   78999999999999999876432211 11122234567


Q ss_pred             CCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcccc
Q 017812          296 LLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVN  331 (365)
Q Consensus       296 ~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~~  331 (365)
                      ++.+|+|+|+.+++++... ...+|.++..++|..+.
T Consensus       210 ~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  246 (256)
T PRK12743        210 RPGDTHEIASLVAWLCSEGASYTTGQSLIVDGGFMLA  246 (256)
T ss_pred             CCCCHHHHHHHHHHHhCccccCcCCcEEEECCCcccc
Confidence            8889999999999654322 24689999999997653

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=2e-36  Score=300.33  Aligned_cols=237  Identities=21%  Similarity=0.253  Sum_probs=199.6

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      ..||+++||||++|||+++|++|+++|++|++++|+.++++++.+++     +.++..+.+|++|+++++++++++.+  
T Consensus       267 ~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~--  339 (520)
T PRK06484        267 ESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL-----GDEHLSVQADITDEAAVESAFAQIQA--  339 (520)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceeEEEccCCCHHHHHHHHHHHHH--
Confidence            57999999999999999999999999999999999988887776655     34677899999999999999999988  


Q ss_pred             hccCCCCCeeEEEecCCccc---CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          137 LDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                          .++++|+||||||+..   +..+.+.+++++++++|+.|+++++++++|+|.+   .|+||++||.++.       
T Consensus       340 ----~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~g~iv~isS~~~~-------  405 (520)
T PRK06484        340 ----RWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQ---GGVIVNLGSIASL-------  405 (520)
T ss_pred             ----HcCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhcc---CCEEEEECchhhc-------
Confidence                5689999999999863   4457789999999999999999999999999932   5899999999988       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH--HHHHHHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF--LSLMAFTVL  291 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~--~~~~~~~~~  291 (365)
                                   .+.++...|++||+++++|+++|+.|+.   +.||+||+|+||+|+|++.......  .........
T Consensus       406 -------------~~~~~~~~Y~asKaal~~l~~~la~e~~---~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~  469 (520)
T PRK06484        406 -------------LALPPRNAYCASKAAVTMLSRSLACEWA---PAGIRVNTVAPGYIETPAVLALKASGRADFDSIRRR  469 (520)
T ss_pred             -------------CCCCCCchhHHHHHHHHHHHHHHHHHhh---hhCeEEEEEEeCCccCchhhhhccccHHHHHHHHhc
Confidence                         7778889999999999999999999998   7899999999999999987643211  111112223


Q ss_pred             HHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017812          292 KLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  330 (365)
Q Consensus       292 ~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~  330 (365)
                      .|++++.+|+|+|+.+++++... ...+|+.+..++|...
T Consensus       470 ~~~~~~~~~~dia~~~~~l~s~~~~~~~G~~i~vdgg~~~  509 (520)
T PRK06484        470 IPLGRLGDPEEVAEAIAFLASPAASYVNGATLTVDGGWTA  509 (520)
T ss_pred             CCCCCCcCHHHHHHHHHHHhCccccCccCcEEEECCCccC
Confidence            46678889999999999654322 3568999999988644

>PLN02253 xanthoxin dehydrogenase

Probab=100.00  E-value=5e-36  Score=274.40  Aligned_cols=241  Identities=20%  Similarity=0.256  Sum_probs=195.4

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.+..++..+++..   +.+++++++|++|.++++++++.+.+
T Consensus        14 ~~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~~~   90 (280)
T PLN02253         14 QRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGG---EPNVCFFHCDVTVEDDVSRAVDFTVD   90 (280)
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcC---CCceEEEEeecCCHHHHHHHHHHHHH
Confidence            357899999999999999999999999999999999998877776666522   35789999999999999999999988


Q ss_pred             HHhccCCCCCeeEEEecCCcccC----CCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc
Q 017812          135 WLLDSDMHSSIQLLINNAGILAT----SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN  210 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~~----~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~  210 (365)
                            .++++|+||||||+...    ..+.+.+++++++++|+.|+++++++++|.|.+++ .|+||++||.++.    
T Consensus        91 ------~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~ii~isS~~~~----  159 (280)
T PLN02253         91 ------KFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLK-KGSIVSLCSVASA----  159 (280)
T ss_pred             ------HhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CceEEEecChhhc----
Confidence                  56889999999998632    34678899999999999999999999999998765 6899999999887    


Q ss_pred             ccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc-hhHH---HHH
Q 017812          211 AQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV-PSFL---SLM  286 (365)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~-~~~~---~~~  286 (365)
                                      .+.++...|++||+|++++++++++|+.   .+||+|++++||+++|++.... +...   ...
T Consensus       160 ----------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~  220 (280)
T PLN02253        160 ----------------IGGLGPHAYTGSKHAVLGLTRSVAAELG---KHGIRVNCVSPYAVPTALALAHLPEDERTEDAL  220 (280)
T ss_pred             ----------------ccCCCCcccHHHHHHHHHHHHHHHHHhh---hcCeEEEEEeeCcccccccccccccccchhhhh
Confidence                            5566677899999999999999999998   7899999999999999976432 1110   000


Q ss_pred             -HHHH----HHHh-cCCCCHHHHHHHHHHHhcCCC---CCcccEEeCCCCccc
Q 017812          287 -AFTV----LKLL-GLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRTV  330 (365)
Q Consensus       287 -~~~~----~~~~-~~~~~p~e~A~~i~~~~l~~~---~~~G~~~~~~~g~~~  330 (365)
                       ....    ..++ ++..+|+|+|+++++  +.++   ..+|+.+..++|...
T Consensus       221 ~~~~~~~~~~~~l~~~~~~~~dva~~~~~--l~s~~~~~i~G~~i~vdgG~~~  271 (280)
T PLN02253        221 AGFRAFAGKNANLKGVELTVDDVANAVLF--LASDEARYISGLNLMIDGGFTC  271 (280)
T ss_pred             hhhHHHhhcCCCCcCCCCCHHHHHHHHHh--hcCcccccccCcEEEECCchhh
Confidence             0000    0111 345799999999995  4443   457888888887643

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=100.00  E-value=3.9e-36  Score=265.05  Aligned_cols=190  Identities=30%  Similarity=0.435  Sum_probs=175.5

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      .+..+|.|+|||+.+|.|+.+|++|.++|++|++.+.+++..++...+..    +.+...+++|++++++|+++.+.+++
T Consensus        25 ~~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~----s~rl~t~~LDVT~~esi~~a~~~V~~  100 (322)
T KOG1610|consen   25 DSLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETK----SPRLRTLQLDVTKPESVKEAAQWVKK  100 (322)
T ss_pred             cccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhc----CCcceeEeeccCCHHHHHHHHHHHHH
Confidence            34678999999999999999999999999999999999888887777764    45788999999999999999999999


Q ss_pred             HHhccCCCCCeeEEEecCCcc---cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017812          135 WLLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  211 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~---~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~  211 (365)
                      .+++    .++..||||||+.   ++.+.++.++++.+++||++|++.++++++|.+++++  ||||+|||+.|.     
T Consensus       101 ~l~~----~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~ar--GRvVnvsS~~GR-----  169 (322)
T KOG1610|consen  101 HLGE----DGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRAR--GRVVNVSSVLGR-----  169 (322)
T ss_pred             hccc----ccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhcc--CeEEEecccccC-----
Confidence            8854    5599999999976   5667889999999999999999999999999999986  999999999998     


Q ss_pred             cCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccc
Q 017812          212 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMR  277 (365)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~  277 (365)
                                     .+.|...+|++||+|++.|+.+|++|+.   +.||+|..|.||+.+|++..
T Consensus       170 ---------------~~~p~~g~Y~~SK~aVeaf~D~lR~EL~---~fGV~VsiiePG~f~T~l~~  217 (322)
T KOG1610|consen  170 ---------------VALPALGPYCVSKFAVEAFSDSLRRELR---PFGVKVSIIEPGFFKTNLAN  217 (322)
T ss_pred             ---------------ccCcccccchhhHHHHHHHHHHHHHHHH---hcCcEEEEeccCccccccCC
Confidence                           8899999999999999999999999998   99999999999999999986

>PRK06940 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.9e-36  Score=273.11  Aligned_cols=250  Identities=16%  Similarity=0.178  Sum_probs=188.0

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhc
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  138 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~  138 (365)
                      +|+++|||| ||||+++|++|+ +|++|++++|+.++++++.+++...  +.++.++++|++|.+++.++++++.     
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~i~~~~~~~~-----   72 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREA--GFDVSTQEVDVSSRESVKALAATAQ-----   72 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEeecCCHHHHHHHHHHHH-----
Confidence            589999998 699999999997 8999999999998888888777654  4578899999999999999998873     


Q ss_pred             cCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc-------
Q 017812          139 SDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA-------  211 (365)
Q Consensus       139 ~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~-------  211 (365)
                        .++++|+||||||+..     +.+++++++++|+.|++++++.++|.|.+   .|++|++||.++......       
T Consensus        73 --~~g~id~li~nAG~~~-----~~~~~~~~~~vN~~g~~~l~~~~~~~m~~---~g~iv~isS~~~~~~~~~~~~~~~~  142 (275)
T PRK06940         73 --TLGPVTGLVHTAGVSP-----SQASPEAILKVDLYGTALVLEEFGKVIAP---GGAGVVIASQSGHRLPALTAEQERA  142 (275)
T ss_pred             --hcCCCCEEEECCCcCC-----chhhHHHHHHHhhHHHHHHHHHHHHHHhh---CCCEEEEEecccccCcccchhhhcc
Confidence              3578999999999852     24678999999999999999999999965   368899999887632100       


Q ss_pred             --cCCCccccccccc-cCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc-hhH--HHH
Q 017812          212 --QVNNETITGKFFL-RSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV-PSF--LSL  285 (365)
Q Consensus       212 --~~~~~~~~~~~~~-~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~-~~~--~~~  285 (365)
                        ..+..++....+. .....+++..|++||+|++++++++++|+.   ++||+||+|+||+++|++.... ...  ...
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~  219 (275)
T PRK06940        143 LATTPTEELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWG---ERGARINSISPGIISTPLAQDELNGPRGDGY  219 (275)
T ss_pred             ccccccccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHc---cCCeEEEEeccCcCcCccchhhhcCCchHHH
Confidence              0000000000000 000013567899999999999999999998   7899999999999999987432 111  111


Q ss_pred             HHHHHHHHhcCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCccc
Q 017812          286 MAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTV  330 (365)
Q Consensus       286 ~~~~~~~~~~~~~~p~e~A~~i~~~~l~-~~~~~G~~~~~~~g~~~  330 (365)
                      .......|++|+.+|+|+|+.+++++.. +...+|+.+..|+|...
T Consensus       220 ~~~~~~~p~~r~~~peeia~~~~fL~s~~~~~itG~~i~vdgg~~~  265 (275)
T PRK06940        220 RNMFAKSPAGRPGTPDEIAALAEFLMGPRGSFITGSDFLVDGGATA  265 (275)
T ss_pred             HHHhhhCCcccCCCHHHHHHHHHHHcCcccCcccCceEEEcCCeEE
Confidence            1222334778899999999999953321 23568999998988654

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=100.00  E-value=2.6e-37  Score=276.69  Aligned_cols=226  Identities=31%  Similarity=0.427  Sum_probs=195.8

Q ss_pred             cCC--ChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhccCCC-
Q 017812           66 GAT--SGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMH-  142 (365)
Q Consensus        66 Gas--sGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~~~~-  142 (365)
                      |++  +|||+++|++|+++|++|++++|+.+++++..+++.+..+ .+  ++++|++++++++++++++.+      .+ 
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~-~~--~~~~D~~~~~~v~~~~~~~~~------~~~   71 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYG-AE--VIQCDLSDEESVEALFDEAVE------RFG   71 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTT-SE--EEESCTTSHHHHHHHHHHHHH------HHC
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcC-Cc--eEeecCcchHHHHHHHHHHHh------hcC
Confidence            666  9999999999999999999999999998888888877654 33  599999999999999999998      55 


Q ss_pred             CCeeEEEecCCcccC------CCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017812          143 SSIQLLINNAGILAT------SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  216 (365)
Q Consensus       143 ~~id~lv~nAG~~~~------~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~  216 (365)
                      ++||+||||+|...+      ..+.+.++|+..+++|+.+++.+++++.|+|.+.   |+||++||.++.          
T Consensus        72 g~iD~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---gsii~iss~~~~----------  138 (241)
T PF13561_consen   72 GRIDILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKG---GSIINISSIAAQ----------  138 (241)
T ss_dssp             SSESEEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHE---EEEEEEEEGGGT----------
T ss_pred             CCeEEEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC---CCcccccchhhc----------
Confidence            889999999998643      3456889999999999999999999999988773   799999999887          


Q ss_pred             cccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCC-CCeEEEEecCCcccCCccccchhHH-HHHHHHHHHHh
Q 017812          217 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKS-RHVSVIAADPGVVKTNIMREVPSFL-SLMAFTVLKLL  294 (365)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~-~gi~v~~v~PG~v~T~~~~~~~~~~-~~~~~~~~~~~  294 (365)
                                .+.+++..|+++|+|+++|+++++.|++   + +|||||+|+||++.|++.+...... .........|+
T Consensus       139 ----------~~~~~~~~y~~sKaal~~l~r~lA~el~---~~~gIrVN~V~pG~i~t~~~~~~~~~~~~~~~~~~~~pl  205 (241)
T PF13561_consen  139 ----------RPMPGYSAYSASKAALEGLTRSLAKELA---PKKGIRVNAVSPGPIETPMTERIPGNEEFLEELKKRIPL  205 (241)
T ss_dssp             ----------SBSTTTHHHHHHHHHHHHHHHHHHHHHG---GHGTEEEEEEEESSBSSHHHHHHHTHHHHHHHHHHHSTT
T ss_pred             ----------ccCccchhhHHHHHHHHHHHHHHHHHhc---cccCeeeeeecccceeccchhccccccchhhhhhhhhcc
Confidence                      7788889999999999999999999998   7 8999999999999999976554322 23334455789


Q ss_pred             cCCCCHHHHHHHHHHHhcCCC---CCcccEEeCCCCc
Q 017812          295 GLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGR  328 (365)
Q Consensus       295 ~~~~~p~e~A~~i~~~~l~~~---~~~G~~~~~~~g~  328 (365)
                      +|+.+|+|+|++++  ||.++   ..+|+.+.+|+|-
T Consensus       206 ~r~~~~~evA~~v~--fL~s~~a~~itG~~i~vDGG~  240 (241)
T PF13561_consen  206 GRLGTPEEVANAVL--FLASDAASYITGQVIPVDGGF  240 (241)
T ss_dssp             SSHBEHHHHHHHHH--HHHSGGGTTGTSEEEEESTTG
T ss_pred             CCCcCHHHHHHHHH--HHhCccccCccCCeEEECCCc
Confidence            99999999999999  55565   4689999999884

...

>PRK05717 oxidoreductase; Validated

Probab=100.00  E-value=7.7e-36  Score=269.45  Aligned_cols=238  Identities=23%  Similarity=0.224  Sum_probs=193.4

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.++.++..+++     +.++.++++|+++.++++++++++.+
T Consensus         6 ~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~~~   80 (255)
T PRK05717          6 PGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL-----GENAWFIAMDVADEAQVAAGVAEVLG   80 (255)
T ss_pred             cccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc-----CCceEEEEccCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999987766654443     34688999999999999999999887


Q ss_pred             HHhccCCCCCeeEEEecCCcccC----CCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc
Q 017812          135 WLLDSDMHSSIQLLINNAGILAT----SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN  210 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~~----~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~  210 (365)
                            .++++|++|||||+..+    ..+.+.+++++++++|+.+++.+++++.|+|.+..  |+||++||..+.    
T Consensus        81 ------~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--g~ii~~sS~~~~----  148 (255)
T PRK05717         81 ------QFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHN--GAIVNLASTRAR----  148 (255)
T ss_pred             ------HhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC--cEEEEEcchhhc----
Confidence                  56889999999998632    33568899999999999999999999999997653  899999999887    


Q ss_pred             ccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHH
Q 017812          211 AQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTV  290 (365)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~  290 (365)
                                      .+.+....|++||+|+++++++++.++.    ++|+|++++||+++|++...............
T Consensus       149 ----------------~~~~~~~~Y~~sKaa~~~~~~~la~~~~----~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~  208 (255)
T PRK05717        149 ----------------QSEPDTEAYAASKGGLLALTHALAISLG----PEIRVNAVSPGWIDARDPSQRRAEPLSEADHA  208 (255)
T ss_pred             ----------------CCCCCCcchHHHHHHHHHHHHHHHHHhc----CCCEEEEEecccCcCCccccccchHHHHHHhh
Confidence                            6667788999999999999999999985    46999999999999998544221111111122


Q ss_pred             HHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017812          291 LKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  329 (365)
Q Consensus       291 ~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~  329 (365)
                      ..+.+++.+|+|+|..+++++... ...+|+.+..++|..
T Consensus       209 ~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~gg~~  248 (255)
T PRK05717        209 QHPAGRVGTVEDVAAMVAWLLSRQAGFVTGQEFVVDGGMT  248 (255)
T ss_pred             cCCCCCCcCHHHHHHHHHHHcCchhcCccCcEEEECCCce
Confidence            345678899999999998544221 245788888777754

>PRK07856 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.6e-36  Score=268.64  Aligned_cols=235  Identities=24%  Similarity=0.275  Sum_probs=193.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.++        ..  .+.++.++++|++++++++++++.+.+ 
T Consensus         3 ~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~--------~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~-   71 (252)
T PRK07856          3 DLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE--------TV--DGRPAEFHAADVRDPDQVAALVDAIVE-   71 (252)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh--------hh--cCCceEEEEccCCCHHHHHHHHHHHHH-
Confidence            4679999999999999999999999999999999998754        11  145688999999999999999999887 


Q ss_pred             HhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                           .++++|++|||||+..  +..+.+.+.+++.+++|+.+++.+++.+.|.|.+++..|+||++||.++.       
T Consensus        72 -----~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~-------  139 (252)
T PRK07856         72 -----RHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGR-------  139 (252)
T ss_pred             -----HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccC-------
Confidence                 5688999999999863  34467889999999999999999999999999875435899999999987       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh-HHHHHHHHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS-FLSLMAFTVLK  292 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~-~~~~~~~~~~~  292 (365)
                                   .+.++...|++||+++++|+++++.|+.   +. |++++|+||+|+|++...... ...........
T Consensus       140 -------------~~~~~~~~Y~~sK~a~~~l~~~la~e~~---~~-i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~  202 (252)
T PRK07856        140 -------------RPSPGTAAYGAAKAGLLNLTRSLAVEWA---PK-VRVNAVVVGLVRTEQSELHYGDAEGIAAVAATV  202 (252)
T ss_pred             -------------CCCCCCchhHHHHHHHHHHHHHHHHHhc---CC-eEEEEEEeccccChHHhhhccCHHHHHHHhhcC
Confidence                         7778889999999999999999999997   55 999999999999998653211 11111122224


Q ss_pred             HhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017812          293 LLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  330 (365)
Q Consensus       293 ~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~  330 (365)
                      |++++.+|+|+|+.+++++... ...+|+.+..++|...
T Consensus       203 ~~~~~~~p~~va~~~~~L~~~~~~~i~G~~i~vdgg~~~  241 (252)
T PRK07856        203 PLGRLATPADIAWACLFLASDLASYVSGANLEVHGGGER  241 (252)
T ss_pred             CCCCCcCHHHHHHHHHHHcCcccCCccCCEEEECCCcch
Confidence            6678899999999999644321 2568999999988765

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.3e-35  Score=267.36  Aligned_cols=237  Identities=22%  Similarity=0.242  Sum_probs=190.5

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEec-CchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGR-SSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      +++|+++||||++|||+++|++|+++|++|+++++ +.++.+++..++     +.++.++++|++|+++++++++++.+ 
T Consensus         3 l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~-   76 (253)
T PRK08642          3 ISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADEL-----GDRAIALQADVTDREQVQAMFATATE-   76 (253)
T ss_pred             CCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh-----CCceEEEEcCCCCHHHHHHHHHHHHH-
Confidence            56899999999999999999999999999998765 444444444333     34788999999999999999999887 


Q ss_pred             HhccCCCCC-eeEEEecCCcc--------cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccc
Q 017812          136 LLDSDMHSS-IQLLINNAGIL--------ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHR  206 (365)
Q Consensus       136 ~~~~~~~~~-id~lv~nAG~~--------~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~  206 (365)
                           ..++ +|++|||||+.        .+..+.+.+++++++++|+.+++.++++++|.|.+.+ .|+||++||..+.
T Consensus        77 -----~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~  150 (253)
T PRK08642         77 -----HFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQG-FGRIINIGTNLFQ  150 (253)
T ss_pred             -----HhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcC-CeEEEEECCcccc
Confidence                 4455 99999999974        1244668899999999999999999999999997765 5899999998765


Q ss_pred             ccccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHH
Q 017812          207 NVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLM  286 (365)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~  286 (365)
                                          .+..+...|++||+|++++++++++++.   .+||+||+|+||+++|+............
T Consensus       151 --------------------~~~~~~~~Y~~sK~a~~~l~~~la~~~~---~~~i~v~~i~pG~v~t~~~~~~~~~~~~~  207 (253)
T PRK08642        151 --------------------NPVVPYHDYTTAKAALLGLTRNLAAELG---PYGITVNMVSGGLLRTTDASAATPDEVFD  207 (253)
T ss_pred             --------------------CCCCCccchHHHHHHHHHHHHHHHHHhC---ccCeEEEEEeecccCCchhhccCCHHHHH
Confidence                                4556677899999999999999999998   88999999999999998654322111111


Q ss_pred             HHHHHHHhcCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCc
Q 017812          287 AFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGR  328 (365)
Q Consensus       287 ~~~~~~~~~~~~~p~e~A~~i~~~~l~-~~~~~G~~~~~~~g~  328 (365)
                      ......|++++.+|+|+|+.+++++.. +...+|+.+..++|.
T Consensus       208 ~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~vdgg~  250 (253)
T PRK08642        208 LIAATTPLRKVTTPQEFADAVLFFASPWARAVTGQNLVVDGGL  250 (253)
T ss_pred             HHHhcCCcCCCCCHHHHHHHHHHHcCchhcCccCCEEEeCCCe
Confidence            122334667889999999999965543 236789999888874

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=100.00  E-value=9.8e-36  Score=262.51  Aligned_cols=218  Identities=27%  Similarity=0.380  Sum_probs=187.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .|++++|||||.|||++.|++||++|.+|++++|++++++++.+||.+.++ .++.++.+|+++.+++.   +++++.+ 
T Consensus        48 ~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~-vev~~i~~Dft~~~~~y---e~i~~~l-  122 (312)
T KOG1014|consen   48 LGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYK-VEVRIIAIDFTKGDEVY---EKLLEKL-  122 (312)
T ss_pred             cCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhC-cEEEEEEEecCCCchhH---HHHHHHh-
Confidence            469999999999999999999999999999999999999999999999985 89999999999988733   3333333 


Q ss_pred             ccCCCCCeeEEEecCCcccCC----CCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          138 DSDMHSSIQLLINNAGILATS----SRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~~----~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                         ....|.+||||+|...+.    .+.+.+.++.++.||.++...+++.++|.|.+++ .|-||++||.++.       
T Consensus       123 ---~~~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~-~G~IvnigS~ag~-------  191 (312)
T KOG1014|consen  123 ---AGLDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERK-KGIIVNIGSFAGL-------  191 (312)
T ss_pred             ---cCCceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCC-CceEEEecccccc-------
Confidence               236799999999997532    2456668899999999999999999999999977 7999999999999       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  293 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  293 (365)
                                   .|.|.++.|++||+.+..|+++|+.|+.   .+||.|.++.|++|.|+|.....+..          
T Consensus       192 -------------~p~p~~s~ysasK~~v~~~S~~L~~Ey~---~~gI~Vq~v~p~~VaTkm~~~~~~sl----------  245 (312)
T KOG1014|consen  192 -------------IPTPLLSVYSASKAFVDFFSRCLQKEYE---SKGIFVQSVIPYLVATKMAKYRKPSL----------  245 (312)
T ss_pred             -------------ccChhHHHHHHHHHHHHHHHHHHHHHHH---hcCeEEEEeehhheeccccccCCCCC----------
Confidence                         9999999999999999999999999998   89999999999999999987543221          


Q ss_pred             hcCCCCHHHHHHHHHHHhcCCCCCcc
Q 017812          294 LGLLQSPEKGINSVLDAALAPPETSG  319 (365)
Q Consensus       294 ~~~~~~p~e~A~~i~~~~l~~~~~~G  319 (365)
                        ...+|+.-|...+...-...+.+|
T Consensus       246 --~~ps~~tfaksal~tiG~~~~TtG  269 (312)
T KOG1014|consen  246 --FVPSPETFAKSALNTIGNASETTG  269 (312)
T ss_pred             --cCcCHHHHHHHHHhhcCCcccCCC
Confidence              345899999998865554444444

>PRK08226 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-35  Score=268.09  Aligned_cols=243  Identities=22%  Similarity=0.265  Sum_probs=196.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      .+++|+++||||++|||+++|++|+++|++|++++|+.+ ..+..+++...  +.++.++++|++++++++++++++.+ 
T Consensus         3 ~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~-   78 (263)
T PRK08226          3 KLTGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGR--GHRCTAVVADVRDPASVAAAIKRAKE-   78 (263)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHh--CCceEEEECCCCCHHHHHHHHHHHHH-
Confidence            467899999999999999999999999999999999875 44455555443  45788999999999999999999988 


Q ss_pred             HhccCCCCCeeEEEecCCcc--cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                           .++++|++|||||..  .+..+.+.+++++.+++|+.+++.+++.++|.|.+.+ .++||++||..+.       
T Consensus        79 -----~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~-------  145 (263)
T PRK08226         79 -----KEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARK-DGRIVMMSSVTGD-------  145 (263)
T ss_pred             -----HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEECcHHhc-------
Confidence                 568899999999985  3445678899999999999999999999999997765 5899999998763       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH------H-HHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF------L-SLM  286 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~------~-~~~  286 (365)
                                  ..+.++...|++||+++++++++++.++.   ++||+|++|+||+++|++.+.....      . ...
T Consensus       146 ------------~~~~~~~~~Y~~sK~a~~~~~~~la~~~~---~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~  210 (263)
T PRK08226        146 ------------MVADPGETAYALTKAAIVGLTKSLAVEYA---QSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLT  210 (263)
T ss_pred             ------------ccCCCCcchHHHHHHHHHHHHHHHHHHhc---ccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHH
Confidence                        03456678899999999999999999997   7899999999999999987643210      0 011


Q ss_pred             HHHHHHHhcCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCccc
Q 017812          287 AFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTV  330 (365)
Q Consensus       287 ~~~~~~~~~~~~~p~e~A~~i~~~~l~-~~~~~G~~~~~~~g~~~  330 (365)
                      ......|++++.+|+|+|+.+++++.. +...+|+.+..|+|...
T Consensus       211 ~~~~~~p~~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~dgg~~~  255 (263)
T PRK08226        211 EMAKAIPLRRLADPLEVGELAAFLASDESSYLTGTQNVIDGGSTL  255 (263)
T ss_pred             HHhccCCCCCCCCHHHHHHHHHHHcCchhcCCcCceEeECCCccc
Confidence            112223667788999999999954422 23668999998988654

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-35  Score=266.27  Aligned_cols=243  Identities=21%  Similarity=0.273  Sum_probs=204.0

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.+.++++.+++++.  +.++.++.+|+++++++.++++++.+
T Consensus         7 ~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~   84 (256)
T PRK06124          7 FSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAA--GGAAEALAFDIADEEAVAAAFARIDA   84 (256)
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999998888888887654  44688999999999999999999988


Q ss_pred             HHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017812          135 WLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~  212 (365)
                            .++++|++|||||...  +..+.+.+++++.+++|+.+++.+++.++|.|.+++ .++||++||..+.      
T Consensus        85 ------~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~------  151 (256)
T PRK06124         85 ------EHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQG-YGRIIAITSIAGQ------  151 (256)
T ss_pred             ------hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEeechhc------
Confidence                  5688999999999864  345678899999999999999999999999998765 6899999999887      


Q ss_pred             CCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh-HHHHHHHHHH
Q 017812          213 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS-FLSLMAFTVL  291 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~-~~~~~~~~~~  291 (365)
                                    .+.++..+|++||+++++++++++.|+.   .+||++++|+||+++|++.+.... ..........
T Consensus       152 --------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~  214 (256)
T PRK06124        152 --------------VARAGDAVYPAAKQGLTGLMRALAAEFG---PHGITSNAIAPGYFATETNAAMAADPAVGPWLAQR  214 (256)
T ss_pred             --------------cCCCCccHhHHHHHHHHHHHHHHHHHHH---HhCcEEEEEEECCccCcchhhhccChHHHHHHHhc
Confidence                          6778889999999999999999999997   789999999999999998654311 1111112223


Q ss_pred             HHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017812          292 KLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  329 (365)
Q Consensus       292 ~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~  329 (365)
                      .+.+++.+|+|+++++++++... ...+|+++..++|..
T Consensus       215 ~~~~~~~~~~~~a~~~~~l~~~~~~~~~G~~i~~dgg~~  253 (256)
T PRK06124        215 TPLGRWGRPEEIAGAAVFLASPAASYVNGHVLAVDGGYS  253 (256)
T ss_pred             CCCCCCCCHHHHHHHHHHHcCcccCCcCCCEEEECCCcc
Confidence            35677889999999999644332 245799998888754

>PRK06949 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3e-35  Score=265.88  Aligned_cols=244  Identities=24%  Similarity=0.313  Sum_probs=202.2

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHH
Q 017812           54 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  133 (365)
Q Consensus        54 ~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~  133 (365)
                      ..++++|+++||||++|||+++|++|+++|++|++++|+.++++++..++...  +.+++++.+|++++++++++++++.
T Consensus         4 ~~~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   81 (258)
T PRK06949          4 SINLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAE--GGAAHVVSLDVTDYQSIKAAVAHAE   81 (258)
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999999999888888777554  3468899999999999999999988


Q ss_pred             HHHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCC-------CCeEEEEcCCc
Q 017812          134 QWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPV-------PSRIVNVTSFT  204 (365)
Q Consensus       134 ~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~-------~g~iV~vsS~~  204 (365)
                      +      .++++|++|||||+..  +..+.+.++++.++++|+.+++.++++++|.|.++..       .++||++||..
T Consensus        82 ~------~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~  155 (258)
T PRK06949         82 T------EAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVA  155 (258)
T ss_pred             H------hcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECccc
Confidence            7      5689999999999753  3345678899999999999999999999999976531       47999999998


Q ss_pred             ccccccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHH
Q 017812          205 HRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLS  284 (365)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~  284 (365)
                      +.                    .+.+...+|+++|++++.++++++.++.   ++||+|++|+||+|+|++.........
T Consensus       156 ~~--------------------~~~~~~~~Y~~sK~a~~~~~~~la~~~~---~~~i~v~~v~pG~v~t~~~~~~~~~~~  212 (258)
T PRK06949        156 GL--------------------RVLPQIGLYCMSKAAVVHMTRAMALEWG---RHGINVNAICPGYIDTEINHHHWETEQ  212 (258)
T ss_pred             cc--------------------CCCCCccHHHHHHHHHHHHHHHHHHHHH---hcCeEEEEEeeCCCcCCcchhccChHH
Confidence            77                    6667788999999999999999999997   789999999999999999765322221


Q ss_pred             HHHHHHHHHhcCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCc
Q 017812          285 LMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGR  328 (365)
Q Consensus       285 ~~~~~~~~~~~~~~~p~e~A~~i~~~~l~-~~~~~G~~~~~~~g~  328 (365)
                      ........+.+++.+|+|+|+.+.+++-. +...+|+.+..|+|.
T Consensus       213 ~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~G~~i~~dgg~  257 (258)
T PRK06949        213 GQKLVSMLPRKRVGKPEDLDGLLLLLAADESQFINGAIISADDGF  257 (258)
T ss_pred             HHHHHhcCCCCCCcCHHHHHHHHHHHhChhhcCCCCcEEEeCCCC
Confidence            12222333567889999999999954432 235689998888763

>PRK06523 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-35  Score=266.78  Aligned_cols=235  Identities=22%  Similarity=0.251  Sum_probs=191.6

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.+..      .     ..++.++++|++|+++++++++++.+
T Consensus         5 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~------~-----~~~~~~~~~D~~~~~~~~~~~~~~~~   73 (260)
T PRK06523          5 LELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD------L-----PEGVEFVAADLTTAEGCAAVARAVLE   73 (260)
T ss_pred             cCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh------c-----CCceeEEecCCCCHHHHHHHHHHHHH
Confidence            457899999999999999999999999999999999986531      1     34678999999999999999999887


Q ss_pred             HHhccCCCCCeeEEEecCCccc----CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc
Q 017812          135 WLLDSDMHSSIQLLINNAGILA----TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN  210 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~----~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~  210 (365)
                            .++++|++|||||...    +..+.+.+++++++++|+.|++.++++++|+|++++ .|+||++||..+.    
T Consensus        74 ------~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~ii~isS~~~~----  142 (260)
T PRK06523         74 ------RLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARG-SGVIIHVTSIQRR----  142 (260)
T ss_pred             ------HcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CcEEEEEeccccc----
Confidence                  5688999999999742    234578899999999999999999999999998765 6899999999876    


Q ss_pred             ccCCCccccccccccCCCCC-hhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH-------
Q 017812          211 AQVNNETITGKFFLRSKCYP-CARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF-------  282 (365)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~-~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~-------  282 (365)
                                      .+.+ +...|++||++++.++++++.++.   +.||++++|+||+|+|++.......       
T Consensus       143 ----------------~~~~~~~~~Y~~sK~a~~~l~~~~a~~~~---~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~  203 (260)
T PRK06523        143 ----------------LPLPESTTAYAAAKAALSTYSKSLSKEVA---PKGVRVNTVSPGWIETEAAVALAERLAEAAGT  203 (260)
T ss_pred             ----------------CCCCCCcchhHHHHHHHHHHHHHHHHHHh---hcCcEEEEEecCcccCccHHHHHHHHHhhcCC
Confidence                            4433 678999999999999999999998   7899999999999999986532110       


Q ss_pred             --HHHHHH----HHHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017812          283 --LSLMAF----TVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  330 (365)
Q Consensus       283 --~~~~~~----~~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~  330 (365)
                        ......    ....|++++.+|+|+|+.+++++... ...+|+.+..++|...
T Consensus       204 ~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~vdgg~~~  258 (260)
T PRK06523        204 DYEGAKQIIMDSLGGIPLGRPAEPEEVAELIAFLASDRAASITGTEYVIDGGTVP  258 (260)
T ss_pred             CHHHHHHHHHHHhccCccCCCCCHHHHHHHHHHHhCcccccccCceEEecCCccC
Confidence              000000    11136678889999999999654322 3567998888887643

>PRK08862 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-35  Score=261.52  Aligned_cols=218  Identities=19%  Similarity=0.170  Sum_probs=179.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      +++||+++||||++|||+++|++|+++|++|++++|+.++++++.+++.+.  +.++..+++|++|+++++++++++.+ 
T Consensus         2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~-   78 (227)
T PRK08862          2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSAL--TDNVYSFQLKDFSQESIRHLFDAIEQ-   78 (227)
T ss_pred             CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--CCCeEEEEccCCCHHHHHHHHHHHHH-
Confidence            367999999999999999999999999999999999999999988888765  35678899999999999999999987 


Q ss_pred             HhccCCCC-CeeEEEecCCcc---cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017812          136 LLDSDMHS-SIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  211 (365)
Q Consensus       136 ~~~~~~~~-~id~lv~nAG~~---~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~  211 (365)
                           .++ ++|++|||||..   .+..+.+.+++.+.+++|+.+++.+++.++|+|.+++.+|+||++||..+.     
T Consensus        79 -----~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~-----  148 (227)
T PRK08862         79 -----QFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH-----  148 (227)
T ss_pred             -----HhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC-----
Confidence                 456 899999999864   234567889999999999999999999999999876446899999997543     


Q ss_pred             cCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHH
Q 017812          212 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVL  291 (365)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~  291 (365)
                                        ++...|++||+|+.+|+++|+.|+.   ++||+||+|+||+++|+... .+. .    +.. 
T Consensus       149 ------------------~~~~~Y~asKaal~~~~~~la~el~---~~~Irvn~v~PG~i~t~~~~-~~~-~----~~~-  200 (227)
T PRK08862        149 ------------------QDLTGVESSNALVSGFTHSWAKELT---PFNIRVGGVVPSIFSANGEL-DAV-H----WAE-  200 (227)
T ss_pred             ------------------CCcchhHHHHHHHHHHHHHHHHHHh---hcCcEEEEEecCcCcCCCcc-CHH-H----HHH-
Confidence                              3467899999999999999999998   88999999999999999421 111 1    000 


Q ss_pred             HHhcCCCCHHHHHHHHHHHhcCCCCCcccEE
Q 017812          292 KLLGLLQSPEKGINSVLDAALAPPETSGVYF  322 (365)
Q Consensus       292 ~~~~~~~~p~e~A~~i~~~~l~~~~~~G~~~  322 (365)
                        .     .+|++.++.+++ +.+.-+|..+
T Consensus       201 --~-----~~~~~~~~~~l~-~~~~~tg~~~  223 (227)
T PRK08862        201 --I-----QDELIRNTEYIV-ANEYFSGRVV  223 (227)
T ss_pred             --H-----HHHHHhheeEEE-ecccccceEE
Confidence              0     178888888533 2334455443

>PRK07109 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-35  Score=276.73  Aligned_cols=225  Identities=26%  Similarity=0.308  Sum_probs=192.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      .+++|+++|||||+|||+++|++|+++|++|++++|++++++++.+++.+.  +.++.++++|++|.++++++++++.+ 
T Consensus         5 ~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~--g~~~~~v~~Dv~d~~~v~~~~~~~~~-   81 (334)
T PRK07109          5 PIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAA--GGEALAVVADVADAEAVQAAADRAEE-   81 (334)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHc--CCcEEEEEecCCCHHHHHHHHHHHHH-
Confidence            477899999999999999999999999999999999999999888888765  45788999999999999999999887 


Q ss_pred             HhccCCCCCeeEEEecCCcc--cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                           .++++|++|||||+.  .+..+.+.+++++++++|+.|++++++.++|+|++++ .|+||++||..+.       
T Consensus        82 -----~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~-~g~iV~isS~~~~-------  148 (334)
T PRK07109         82 -----ELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRD-RGAIIQVGSALAY-------  148 (334)
T ss_pred             -----HCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEeCChhhc-------
Confidence                 568999999999975  3456789999999999999999999999999998875 6899999999988       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  293 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  293 (365)
                                   .+.+....|++||+++++|+++++.|+... ..+|++++|+||.++|++........   . ....+
T Consensus       149 -------------~~~~~~~~Y~asK~a~~~~~~~l~~el~~~-~~~I~v~~v~Pg~v~T~~~~~~~~~~---~-~~~~~  210 (334)
T PRK07109        149 -------------RSIPLQSAYCAAKHAIRGFTDSLRCELLHD-GSPVSVTMVQPPAVNTPQFDWARSRL---P-VEPQP  210 (334)
T ss_pred             -------------cCCCcchHHHHHHHHHHHHHHHHHHHHhhc-CCCeEEEEEeCCCccCchhhhhhhhc---c-ccccC
Confidence                         677888999999999999999999998621 35899999999999999865321110   0 01123


Q ss_pred             hcCCCCHHHHHHHHHHHhcCC
Q 017812          294 LGLLQSPEKGINSVLDAALAP  314 (365)
Q Consensus       294 ~~~~~~p~e~A~~i~~~~l~~  314 (365)
                      ..++.+|+++|+.+++++..+
T Consensus       211 ~~~~~~pe~vA~~i~~~~~~~  231 (334)
T PRK07109        211 VPPIYQPEVVADAILYAAEHP  231 (334)
T ss_pred             CCCCCCHHHHHHHHHHHHhCC
Confidence            345679999999999766543

>PRK08278 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.8e-35  Score=268.41  Aligned_cols=228  Identities=18%  Similarity=0.270  Sum_probs=189.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchh-------HHHHHHHHHhhcCCCceEEEEecCCChhhHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHL-------LSETMADITSRNKDARLEAFQVDLSSFQSVLKF  128 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~-------~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~  128 (365)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+.       +++..+++...  +.++.++++|+++++++.++
T Consensus         3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~   80 (273)
T PRK08278          3 SLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAA--GGQALPLVGDVRDEDQVAAA   80 (273)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHH
Confidence            3678999999999999999999999999999999998653       44555555543  45789999999999999999


Q ss_pred             HHHHHHHHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccc
Q 017812          129 KDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHR  206 (365)
Q Consensus       129 ~~~~~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~  206 (365)
                      ++++.+      ..+++|++|||||...  +..+.+.+++++++++|+.|++.++++++|+|++++ .|+||++||..+.
T Consensus        81 ~~~~~~------~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~  153 (273)
T PRK08278         81 VAKAVE------RFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSE-NPHILTLSPPLNL  153 (273)
T ss_pred             HHHHHH------HhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcC-CCEEEEECCchhc
Confidence            999887      4578999999999853  445678899999999999999999999999998775 6899999998765


Q ss_pred             ccccccCCCccccccccccCCCC--ChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCC-cccCCccccchhHH
Q 017812          207 NVFNAQVNNETITGKFFLRSKCY--PCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG-VVKTNIMREVPSFL  283 (365)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG-~v~T~~~~~~~~~~  283 (365)
                                          .+.  ++...|++||+|++.++++++.|+.   ++||+|++|+|| +++|++.+......
T Consensus       154 --------------------~~~~~~~~~~Y~~sK~a~~~~~~~la~el~---~~~I~v~~i~Pg~~i~t~~~~~~~~~~  210 (273)
T PRK08278        154 --------------------DPKWFAPHTAYTMAKYGMSLCTLGLAEEFR---DDGIAVNALWPRTTIATAAVRNLLGGD  210 (273)
T ss_pred             --------------------cccccCCcchhHHHHHHHHHHHHHHHHHhh---hcCcEEEEEeCCCccccHHHHhccccc
Confidence                                443  6788999999999999999999998   789999999999 68998765432211


Q ss_pred             HHHHHHHHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEe
Q 017812          284 SLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFF  323 (365)
Q Consensus       284 ~~~~~~~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~  323 (365)
                              .+++++.+|+++|+.+++++..+ ...+|+++.
T Consensus       211 --------~~~~~~~~p~~va~~~~~l~~~~~~~~~G~~~~  243 (273)
T PRK08278        211 --------EAMRRSRTPEIMADAAYEILSRPAREFTGNFLI  243 (273)
T ss_pred             --------ccccccCCHHHHHHHHHHHhcCccccceeEEEe
Confidence                    13346779999999999655443 356888875

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.1e-35  Score=264.52  Aligned_cols=242  Identities=20%  Similarity=0.290  Sum_probs=200.7

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEE-EecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVL-VGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil-~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      +.+++++||||++|||+++|++|+++|++|++ .+|+.++.+++.++++..  +.++.++.+|++|++++.++++++.+ 
T Consensus         2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~-   78 (250)
T PRK08063          2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEAL--GRKALAVKANVGDVEKIKEMFAQIDE-   78 (250)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHH-
Confidence            45789999999999999999999999999876 588888888888787665  45788999999999999999999987 


Q ss_pred             HhccCCCCCeeEEEecCCcc--cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                           .++++|+||||||..  .+..+.+.+.++.++++|+.+++.++++++|.|.+++ .|+||++||..+.       
T Consensus        79 -----~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~-------  145 (250)
T PRK08063         79 -----EFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVG-GGKIISLSSLGSI-------  145 (250)
T ss_pred             -----HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEEcchhhc-------
Confidence                 567899999999975  3456778899999999999999999999999998765 6899999998876       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHH-HHHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLM-AFTVLK  292 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~-~~~~~~  292 (365)
                                   .+.++...|++||++++.|+++++.++.   +.||++++|+||++.|++....+...... ......
T Consensus       146 -------------~~~~~~~~y~~sK~a~~~~~~~~~~~~~---~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~  209 (250)
T PRK08063        146 -------------RYLENYTTVGVSKAALEALTRYLAVELA---PKGIAVNAVSGGAVDTDALKHFPNREELLEDARAKT  209 (250)
T ss_pred             -------------cCCCCccHHHHHHHHHHHHHHHHHHHHh---HhCeEEEeEecCcccCchhhhccCchHHHHHHhcCC
Confidence                         5667788999999999999999999997   78999999999999999876543321111 111123


Q ss_pred             HhcCCCCHHHHHHHHHHHhcCCC-CCcccEEeCCCCccc
Q 017812          293 LLGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKGRTV  330 (365)
Q Consensus       293 ~~~~~~~p~e~A~~i~~~~l~~~-~~~G~~~~~~~g~~~  330 (365)
                      +.+++.+|+|+|+.+++++..+. ..+|+.+..++|...
T Consensus       210 ~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~gg~~~  248 (250)
T PRK08063        210 PAGRMVEPEDVANAVLFLCSPEADMIRGQTIIVDGGRSL  248 (250)
T ss_pred             CCCCCcCHHHHHHHHHHHcCchhcCccCCEEEECCCeee
Confidence            45567899999999997654432 457999988887653

>PRK06483 dihydromonapterin reductase; Provisional

Probab=100.00  E-value=4.4e-35  Score=261.43  Aligned_cols=231  Identities=20%  Similarity=0.211  Sum_probs=188.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhc
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  138 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~  138 (365)
                      +|+++||||++|||+++|++|+++|++|++++|+++...   +++...    .+.++.+|++|.+++.++++++.+    
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~----   70 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAI---DGLRQA----GAQCIQADFSTNAGIMAFIDELKQ----   70 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHH---HHHHHc----CCEEEEcCCCCHHHHHHHHHHHHh----
Confidence            579999999999999999999999999999999876432   333322    257899999999999999999987    


Q ss_pred             cCCCCCeeEEEecCCcccC--CCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCC-CCCeEEEEcCCcccccccccCCC
Q 017812          139 SDMHSSIQLLINNAGILAT--SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP-VPSRIVNVTSFTHRNVFNAQVNN  215 (365)
Q Consensus       139 ~~~~~~id~lv~nAG~~~~--~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~-~~g~iV~vsS~~~~~~~~~~~~~  215 (365)
                        .++++|++|||||+..+  ..+.+.+++++++++|+.+++.+++.++|.|.+++ ..|+||++||..+.         
T Consensus        71 --~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~---------  139 (236)
T PRK06483         71 --HTDGLRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVE---------  139 (236)
T ss_pred             --hCCCccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhc---------
Confidence              56889999999998532  34567899999999999999999999999998753 14799999998876         


Q ss_pred             ccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhc
Q 017812          216 ETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLG  295 (365)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  295 (365)
                                 .+.+++.+|++||+|+++|+++++.|++   + +|+||+|+||++.|+....  .. .........+++
T Consensus       140 -----------~~~~~~~~Y~asKaal~~l~~~~a~e~~---~-~irvn~v~Pg~~~~~~~~~--~~-~~~~~~~~~~~~  201 (236)
T PRK06483        140 -----------KGSDKHIAYAASKAALDNMTLSFAAKLA---P-EVKVNSIAPALILFNEGDD--AA-YRQKALAKSLLK  201 (236)
T ss_pred             -----------cCCCCCccHHHHHHHHHHHHHHHHHHHC---C-CcEEEEEccCceecCCCCC--HH-HHHHHhccCccc
Confidence                       6677888999999999999999999996   4 6999999999998864321  11 111122234667


Q ss_pred             CCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017812          296 LLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  330 (365)
Q Consensus       296 ~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~  330 (365)
                      +..+|+|+|+.+.+++. ....+|+.+..++|..+
T Consensus       202 ~~~~~~~va~~~~~l~~-~~~~~G~~i~vdgg~~~  235 (236)
T PRK06483        202 IEPGEEEIIDLVDYLLT-SCYVTGRSLPVDGGRHL  235 (236)
T ss_pred             cCCCHHHHHHHHHHHhc-CCCcCCcEEEeCccccc
Confidence            88899999999997663 45778999988888654

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=8.2e-35  Score=263.26  Aligned_cols=243  Identities=19%  Similarity=0.221  Sum_probs=199.1

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhc
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  138 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~  138 (365)
                      +|+++||||++|||.++|++|+++|++|++++|+.+.+++..+++....+..+++++.+|++|.+++.++++++.+    
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~----   77 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDE----   77 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHH----
Confidence            6899999999999999999999999999999999988888877776654335789999999999999999999987    


Q ss_pred             cCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017812          139 SDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  216 (365)
Q Consensus       139 ~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~  216 (365)
                        .++++|++|||||...  +..+.+.+++++.+++|+.|+++++++++|.|.+++..++||++||..+.          
T Consensus        78 --~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~----------  145 (259)
T PRK12384         78 --IFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGK----------  145 (259)
T ss_pred             --HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccc----------
Confidence              5688999999999764  34567889999999999999999999999999875434799999998876          


Q ss_pred             cccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcc-cCCccccchhH----------HHH
Q 017812          217 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVV-KTNIMREVPSF----------LSL  285 (365)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v-~T~~~~~~~~~----------~~~  285 (365)
                                .+.+....|++||+|+++++++++.|+.   +.||+|++++||.+ .|++.....+.          ...
T Consensus       146 ----------~~~~~~~~Y~~sKaa~~~l~~~la~e~~---~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (259)
T PRK12384        146 ----------VGSKHNSGYSAAKFGGVGLTQSLALDLA---EYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVE  212 (259)
T ss_pred             ----------cCCCCCchhHHHHHHHHHHHHHHHHHHH---HcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHH
Confidence                      5666778999999999999999999998   78999999999975 77765432111          111


Q ss_pred             HHHHHHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017812          286 MAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  330 (365)
Q Consensus       286 ~~~~~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~  330 (365)
                      .......+++++.+|+|+++++++++... ...+|+.|..++|+..
T Consensus       213 ~~~~~~~~~~~~~~~~dv~~~~~~l~~~~~~~~~G~~~~v~~g~~~  258 (259)
T PRK12384        213 QYYIDKVPLKRGCDYQDVLNMLLFYASPKASYCTGQSINVTGGQVM  258 (259)
T ss_pred             HHHHHhCcccCCCCHHHHHHHHHHHcCcccccccCceEEEcCCEEe
Confidence            11222346778899999999999554322 2357898888888653

>PRK12939 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.4e-35  Score=261.54  Aligned_cols=243  Identities=29%  Similarity=0.328  Sum_probs=204.6

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      .++++|+++||||+||||+++|++|+++|++|++++|+++++++..++++..  +.++.++++|++|+++++++++++.+
T Consensus         3 ~~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~   80 (250)
T PRK12939          3 SNLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAA--GGRAHAIAADLADPASVQRFFDAAAA   80 (250)
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            3467899999999999999999999999999999999999888888887654  35789999999999999999999887


Q ss_pred             HHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017812          135 WLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~  212 (365)
                            .++++|++|||||...  +..+.+.++++.++++|+.+++.+++.+.|.|.+++ .|++|++||..+.      
T Consensus        81 ------~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~------  147 (250)
T PRK12939         81 ------ALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSG-RGRIVNLASDTAL------  147 (250)
T ss_pred             ------HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEECchhhc------
Confidence                  5678999999999864  345668899999999999999999999999998865 6899999998877      


Q ss_pred             CCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHH
Q 017812          213 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLK  292 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~  292 (365)
                                    .+.+....|+++|++++.+++.++.++.   .++|++++|+||+++|++.+...............
T Consensus       148 --------------~~~~~~~~y~~sK~~~~~~~~~l~~~~~---~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~  210 (250)
T PRK12939        148 --------------WGAPKLGAYVASKGAVIGMTRSLARELG---GRGITVNAIAPGLTATEATAYVPADERHAYYLKGR  210 (250)
T ss_pred             --------------cCCCCcchHHHHHHHHHHHHHHHHHHHh---hhCEEEEEEEECCCCCccccccCChHHHHHHHhcC
Confidence                          6667778999999999999999999997   78999999999999999987654311111222233


Q ss_pred             HhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017812          293 LLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  329 (365)
Q Consensus       293 ~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~  329 (365)
                      +..++.+|+|+|+.+++++... +..+|+++..++|..
T Consensus       211 ~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~~~gg~~  248 (250)
T PRK12939        211 ALERLQVPDDVAGAVLFLLSDAARFVTGQLLPVNGGFV  248 (250)
T ss_pred             CCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCCcc
Confidence            5667889999999999765432 356899998888754

>TIGR02415 23BDH acetoin reductases

Probab=100.00  E-value=7.7e-35  Score=262.59  Aligned_cols=238  Identities=22%  Similarity=0.311  Sum_probs=200.3

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhcc
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  139 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~  139 (365)
                      |+++||||+||||++++++|+++|++|++++|+.+.+++..+++...  +.++..+.+|++|++++.++++++.+     
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~i~~~~~~~~~-----   73 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQA--GGKAVAYKLDVSDKDQVFSAIDQAAE-----   73 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHH-----
Confidence            58999999999999999999999999999999988888887777654  45788999999999999999999988     


Q ss_pred             CCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcc
Q 017812          140 DMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNET  217 (365)
Q Consensus       140 ~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~  217 (365)
                       ..+++|+||||||...  +..+.+.+++++++++|+.+++.+++.+++.|++.+..++||++||..+.           
T Consensus        74 -~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~-----------  141 (254)
T TIGR02415        74 -KFGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGH-----------  141 (254)
T ss_pred             -HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhc-----------
Confidence             5678999999999863  44577899999999999999999999999999887545899999999887           


Q ss_pred             ccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHH----------HHHH
Q 017812          218 ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFL----------SLMA  287 (365)
Q Consensus       218 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~----------~~~~  287 (365)
                               .+.+....|++||++++.|++.++.++.   +.||+|++++||+++|++.+......          ....
T Consensus       142 ---------~~~~~~~~Y~~sK~a~~~~~~~l~~~~~---~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~  209 (254)
T TIGR02415       142 ---------EGNPILSAYSSTKFAVRGLTQTAAQELA---PKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEE  209 (254)
T ss_pred             ---------CCCCCCcchHHHHHHHHHHHHHHHHHhc---ccCeEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHH
Confidence                     6778889999999999999999999997   78999999999999999865443211          0112


Q ss_pred             HHHHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCc
Q 017812          288 FTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  328 (365)
Q Consensus       288 ~~~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~  328 (365)
                      +....+.+++.+|+|+|+++.+++..+ ...+|+++..++|.
T Consensus       210 ~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d~g~  251 (254)
T TIGR02415       210 FSSEIALGRPSEPEDVAGLVSFLASEDSDYITGQSILVDGGM  251 (254)
T ss_pred             HHhhCCCCCCCCHHHHHHHHHhhcccccCCccCcEEEecCCc
Confidence            223345677899999999999544433 25579999888774

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK08628 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.7e-35  Score=264.14  Aligned_cols=240  Identities=27%  Similarity=0.273  Sum_probs=195.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      +++||+++||||++|||+++|++|+++|++|++++|++++. +..+++.+.  +.+++++.+|+++.+++.++++++.+ 
T Consensus         4 ~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~-   79 (258)
T PRK08628          4 NLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRAL--QPRAEFVQVDLTDDAQCRDAVEQTVA-   79 (258)
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHH-
Confidence            47899999999999999999999999999999999998876 666676554  45689999999999999999999887 


Q ss_pred             HhccCCCCCeeEEEecCCcccCC-CCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017812          136 LLDSDMHSSIQLLINNAGILATS-SRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  214 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~~~-~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~  214 (365)
                           .++++|++|||||..... .+.+.++++..+++|+.+++.+++.++|.|++.  .++||++||..+.        
T Consensus        80 -----~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~iv~~ss~~~~--------  144 (258)
T PRK08628         80 -----KFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKAS--RGAIVNISSKTAL--------  144 (258)
T ss_pred             -----hcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhcc--CcEEEEECCHHhc--------
Confidence                 568899999999975322 233448999999999999999999999998765  3899999999887        


Q ss_pred             CccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc----hhHHHHH-HHH
Q 017812          215 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV----PSFLSLM-AFT  289 (365)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~----~~~~~~~-~~~  289 (365)
                                  .+.++...|++||+++++++++++.|+.   ++||++++|+||.++|++.+..    +...... ...
T Consensus       145 ------------~~~~~~~~Y~~sK~a~~~~~~~l~~e~~---~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~  209 (258)
T PRK08628        145 ------------TGQGGTSGYAAAKGAQLALTREWAVALA---KDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAIT  209 (258)
T ss_pred             ------------cCCCCCchhHHHHHHHHHHHHHHHHHHh---hcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHH
Confidence                        6677888999999999999999999997   7899999999999999986431    1111111 111


Q ss_pred             HHHHhc-CCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017812          290 VLKLLG-LLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  329 (365)
Q Consensus       290 ~~~~~~-~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~  329 (365)
                      ...+.+ ++.+|+|+|+.+++++... ...+|+++..++|..
T Consensus       210 ~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg~~  251 (258)
T PRK08628        210 AKIPLGHRMTTAEEIADTAVFLLSERSSHTTGQWLFVDGGYV  251 (258)
T ss_pred             hcCCccccCCCHHHHHHHHHHHhChhhccccCceEEecCCcc
Confidence            112332 6789999999999655443 256888988887753

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-35  Score=267.31  Aligned_cols=230  Identities=22%  Similarity=0.249  Sum_probs=190.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.++.+           ..++.++++|++|+++++++++++.+ 
T Consensus         6 ~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~-----------~~~~~~~~~D~~~~~~~~~~~~~~~~-   73 (266)
T PRK06171          6 NLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ-----------HENYQFVPTDVSSAEEVNHTVAEIIE-   73 (266)
T ss_pred             cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc-----------cCceEEEEccCCCHHHHHHHHHHHHH-
Confidence            478999999999999999999999999999999999876432           23678899999999999999999888 


Q ss_pred             HhccCCCCCeeEEEecCCcccC-----------CCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017812          136 LLDSDMHSSIQLLINNAGILAT-----------SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  204 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~~-----------~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~  204 (365)
                           .++++|++|||||+..+           ..+.+.++|++++++|+.+++++++++.|+|.+++ .|+||++||..
T Consensus        74 -----~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~  147 (266)
T PRK06171         74 -----KFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQH-DGVIVNMSSEA  147 (266)
T ss_pred             -----HcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcC-CcEEEEEcccc
Confidence                 56899999999997532           13568899999999999999999999999998765 68999999999


Q ss_pred             ccccccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCccc-CCccccchh--
Q 017812          205 HRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVK-TNIMREVPS--  281 (365)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~-T~~~~~~~~--  281 (365)
                      +.                    .+.++...|++||+|++.|+++++.|+.   +.||+||+|+||+++ |++......  
T Consensus       148 ~~--------------------~~~~~~~~Y~~sK~a~~~l~~~la~e~~---~~gi~v~~v~pG~~~~t~~~~~~~~~~  204 (266)
T PRK06171        148 GL--------------------EGSEGQSCYAATKAALNSFTRSWAKELG---KHNIRVVGVAPGILEATGLRTPEYEEA  204 (266)
T ss_pred             cc--------------------CCCCCCchhHHHHHHHHHHHHHHHHHhh---hcCeEEEEEeccccccCCCcChhhhhh
Confidence            87                    6777889999999999999999999998   789999999999997 666432110  


Q ss_pred             ---------HHHHHHHHH--HHHhcCCCCHHHHHHHHHHHhcCCC---CCcccEEeCCCCc
Q 017812          282 ---------FLSLMAFTV--LKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGR  328 (365)
Q Consensus       282 ---------~~~~~~~~~--~~~~~~~~~p~e~A~~i~~~~l~~~---~~~G~~~~~~~g~  328 (365)
                               .........  ..|++|+.+|+|+|+++.  +|.++   ..+|+.+..|+|.
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~eva~~~~--fl~s~~~~~itG~~i~vdgg~  263 (266)
T PRK06171        205 LAYTRGITVEQLRAGYTKTSTIPLGRSGKLSEVADLVC--YLLSDRASYITGVTTNIAGGK  263 (266)
T ss_pred             hccccCCCHHHHHhhhcccccccCCCCCCHHHhhhhee--eeeccccccceeeEEEecCcc
Confidence                     000111111  347789999999999999  55554   4578888888774

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1e-34  Score=261.13  Aligned_cols=241  Identities=27%  Similarity=0.331  Sum_probs=202.2

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      +++++++||||+||||.+++++|+++|++|++++|+.++.++..+++..   +.++.++++|++|+++++++++++.+  
T Consensus         3 ~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~--   77 (251)
T PRK07231          3 LEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA---GGRAIAVAADVSDEADVEAAVAAALE--   77 (251)
T ss_pred             cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc---CCeEEEEECCCCCHHHHHHHHHHHHH--
Confidence            6789999999999999999999999999999999999888887777654   35688999999999999999999877  


Q ss_pred             hccCCCCCeeEEEecCCccc---CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          137 LDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                          .++++|++|||||...   +..+.+.+++++.+++|+.+++.+++.+++.|.+++ .++||++||..+.       
T Consensus        78 ----~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~-------  145 (251)
T PRK07231         78 ----RFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEG-GGAIVNVASTAGL-------  145 (251)
T ss_pred             ----HhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhc-------
Confidence                5678999999999853   344678999999999999999999999999998765 6899999999887       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH---HHHHHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF---LSLMAFTV  290 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~---~~~~~~~~  290 (365)
                                   .+.++...|+.||++++.+++.++.++.   +.||++++++||+++|++.......   ........
T Consensus       146 -------------~~~~~~~~y~~sk~~~~~~~~~~a~~~~---~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~  209 (251)
T PRK07231        146 -------------RPRPGLGWYNASKGAVITLTKALAAELG---PDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLA  209 (251)
T ss_pred             -------------CCCCCchHHHHHHHHHHHHHHHHHHHhh---hhCeEEEEEEECccCCCcchhhhcccChHHHHHHhc
Confidence                         6778889999999999999999999997   6799999999999999987654321   11111222


Q ss_pred             HHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017812          291 LKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  330 (365)
Q Consensus       291 ~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~  330 (365)
                      ..+.+++.+|+|+|.++++++..+ ...+|.++..++|..+
T Consensus       210 ~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg~~~  250 (251)
T PRK07231        210 TIPLGRLGTPEDIANAALFLASDEASWITGVTLVVDGGRCV  250 (251)
T ss_pred             CCCCCCCcCHHHHHHHHHHHhCccccCCCCCeEEECCCccC
Confidence            234567789999999999766443 2467999888887543

>PRK07774 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-34  Score=260.82  Aligned_cols=240  Identities=26%  Similarity=0.286  Sum_probs=196.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+..+++.+++...  +.+++.+.+|++|.++++++++++.+ 
T Consensus         3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~-   79 (250)
T PRK07774          3 RFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVAD--GGTAIAVQVDVSDPDSAKAMADATVS-   79 (250)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHH-
Confidence            467899999999999999999999999999999999988877777776544  34678899999999999999999988 


Q ss_pred             HhccCCCCCeeEEEecCCccc-----CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc
Q 017812          136 LLDSDMHSSIQLLINNAGILA-----TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN  210 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~-----~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~  210 (365)
                           ..+++|+||||||+..     +..+.+.+.+++++++|+.+++.++++++|.|.+.+ .|+||++||.+++    
T Consensus        80 -----~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~----  149 (250)
T PRK07774         80 -----AFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRG-GGAIVNQSSTAAW----  149 (250)
T ss_pred             -----HhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhC-CcEEEEEeccccc----
Confidence                 4578999999999853     234567899999999999999999999999998765 6899999998765    


Q ss_pred             ccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHH
Q 017812          211 AQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTV  290 (365)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~  290 (365)
                                         .+.+.|++||++++.+++++++++.   ..||++++++||.++|++.+...+.........
T Consensus       150 -------------------~~~~~Y~~sK~a~~~~~~~l~~~~~---~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~  207 (250)
T PRK07774        150 -------------------LYSNFYGLAKVGLNGLTQQLARELG---GMNIRVNAIAPGPIDTEATRTVTPKEFVADMVK  207 (250)
T ss_pred             -------------------CCccccHHHHHHHHHHHHHHHHHhC---ccCeEEEEEecCcccCccccccCCHHHHHHHHh
Confidence                               2346799999999999999999997   789999999999999999765433221111222


Q ss_pred             HHHhcCCCCHHHHHHHHHHHhcCCC-CCcccEEeCCCCccc
Q 017812          291 LKLLGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKGRTV  330 (365)
Q Consensus       291 ~~~~~~~~~p~e~A~~i~~~~l~~~-~~~G~~~~~~~g~~~  330 (365)
                      ..+..+..+|+|+|+.++.++.... ..+|++|..++|+.+
T Consensus       208 ~~~~~~~~~~~d~a~~~~~~~~~~~~~~~g~~~~v~~g~~~  248 (250)
T PRK07774        208 GIPLSRMGTPEDLVGMCLFLLSDEASWITGQIFNVDGGQII  248 (250)
T ss_pred             cCCCCCCcCHHHHHHHHHHHhChhhhCcCCCEEEECCCeec
Confidence            2234456799999999996554332 357899998888765

>PRK07814 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-34  Score=262.79  Aligned_cols=243  Identities=21%  Similarity=0.240  Sum_probs=199.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      ++++++++||||++|||++++++|+++|++|++++|+.++++++.+++...  +.++.++.+|+++++++.++++++.+ 
T Consensus         7 ~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~-   83 (263)
T PRK07814          7 RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAA--GRRAHVVAADLAHPEATAGLAGQAVE-   83 (263)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHH-
Confidence            477999999999999999999999999999999999998888888877654  45688999999999999999999987 


Q ss_pred             HhccCCCCCeeEEEecCCcccC--CCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGILAT--SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~~--~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                           ..+++|++|||||....  ..+.+.+++++++++|+.+++.+++++.|+|.+....|+||++||..+.       
T Consensus        84 -----~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~-------  151 (263)
T PRK07814         84 -----AFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGR-------  151 (263)
T ss_pred             -----HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEcccccc-------
Confidence                 55789999999997533  4467889999999999999999999999999874336899999999887       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHH-HHHHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSL-MAFTVLK  292 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~-~~~~~~~  292 (365)
                                   .+.++...|++||++++.++++++.|+.   + +|++++|+||+++|++.......... .......
T Consensus       152 -------------~~~~~~~~Y~~sK~a~~~~~~~~~~e~~---~-~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~  214 (263)
T PRK07814        152 -------------LAGRGFAAYGTAKAALAHYTRLAALDLC---P-RIRVNAIAPGSILTSALEVVAANDELRAPMEKAT  214 (263)
T ss_pred             -------------CCCCCCchhHHHHHHHHHHHHHHHHHHC---C-CceEEEEEeCCCcCchhhhccCCHHHHHHHHhcC
Confidence                         6777888999999999999999999996   4 69999999999999986543211111 1111123


Q ss_pred             HhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017812          293 LLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  330 (365)
Q Consensus       293 ~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~  330 (365)
                      +..++.+|+|+|+.+++++... ...+|..+..++|...
T Consensus       215 ~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~~~~~~  253 (263)
T PRK07814        215 PLRRLGDPEDIAAAAVYLASPAGSYLTGKTLEVDGGLTF  253 (263)
T ss_pred             CCCCCcCHHHHHHHHHHHcCccccCcCCCEEEECCCccC
Confidence            4556789999999999654322 2567888888776544

>PRK09186 flagellin modification protein A; Provisional

Probab=100.00  E-value=1.1e-34  Score=261.97  Aligned_cols=247  Identities=15%  Similarity=0.162  Sum_probs=194.7

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      +++|+++||||++|||+++|++|+++|++|++++|+.++++++.+++....++..+.++++|++|++++.++++++.+  
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~--   79 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAE--   79 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHH--
Confidence            468999999999999999999999999999999999999988888886654445667789999999999999999887  


Q ss_pred             hccCCCCCeeEEEecCCccc-----CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017812          137 LDSDMHSSIQLLINNAGILA-----TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  211 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~-----~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~  211 (365)
                          .++++|++|||||...     +..+.+.+.++.++++|+.+++.++++++|.|++++ .++||++||..+......
T Consensus        80 ----~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~  154 (256)
T PRK09186         80 ----KYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQG-GGNLVNISSIYGVVAPKF  154 (256)
T ss_pred             ----HcCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcC-CceEEEEechhhhccccc
Confidence                5688999999998642     345678899999999999999999999999998776 689999999877632110


Q ss_pred             cCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHH
Q 017812          212 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVL  291 (365)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~  291 (365)
                      ..         + ...+......|++||++++++++++++|+.   ++||+|++++||.+.|+......     ......
T Consensus       155 ~~---------~-~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~---~~~i~v~~i~Pg~~~~~~~~~~~-----~~~~~~  216 (256)
T PRK09186        155 EI---------Y-EGTSMTSPVEYAAIKAGIIHLTKYLAKYFK---DSNIRVNCVSPGGILDNQPEAFL-----NAYKKC  216 (256)
T ss_pred             hh---------c-cccccCCcchhHHHHHHHHHHHHHHHHHhC---cCCeEEEEEecccccCCCCHHHH-----HHHHhc
Confidence            00         0 001222334799999999999999999998   78999999999999876522111     111111


Q ss_pred             HHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCc
Q 017812          292 KLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  328 (365)
Q Consensus       292 ~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~  328 (365)
                      .+..++.+|+|+|+.+++++... ...+|+++..++|.
T Consensus       217 ~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~  254 (256)
T PRK09186        217 CNGKGMLDPDDICGTLVFLLSDQSKYITGQNIIVDDGF  254 (256)
T ss_pred             CCccCCCCHHHhhhhHhheeccccccccCceEEecCCc
Confidence            23456789999999999544322 24579999888874

>PRK07576 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-34  Score=263.20  Aligned_cols=241  Identities=19%  Similarity=0.220  Sum_probs=198.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      ++++|+++||||++|||.+++++|+++|++|++++|+.+.+++..+++...  +.+++++.+|++|+++++++++++.+ 
T Consensus         6 ~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~i~~~~~~~~~-   82 (264)
T PRK07576          6 DFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQA--GPEGLGVSADVRDYAAVEAAFAQIAD-   82 (264)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh--CCceEEEECCCCCHHHHHHHHHHHHH-
Confidence            478999999999999999999999999999999999998887777777654  34678899999999999999999887 


Q ss_pred             HhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                           .++++|++|||||...  +..+.+.+++++++++|+.|++.++++++|.|.++  .|+||++||.++.       
T Consensus        83 -----~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~--~g~iv~iss~~~~-------  148 (264)
T PRK07576         83 -----EFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRP--GASIIQISAPQAF-------  148 (264)
T ss_pred             -----HcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC--CCEEEEECChhhc-------
Confidence                 5678999999999753  34567889999999999999999999999999765  3899999999887       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCccc-CCccccc-hhHHHHHHHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVK-TNIMREV-PSFLSLMAFTVL  291 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~-T~~~~~~-~~~~~~~~~~~~  291 (365)
                                   .+.++...|++||++++.|+++++.|+.   .+||++++|+||+++ |+..... +...........
T Consensus       149 -------------~~~~~~~~Y~asK~a~~~l~~~la~e~~---~~gi~v~~v~pg~~~~t~~~~~~~~~~~~~~~~~~~  212 (264)
T PRK07576        149 -------------VPMPMQAHVCAAKAGVDMLTRTLALEWG---PEGIRVNSIVPGPIAGTEGMARLAPSPELQAAVAQS  212 (264)
T ss_pred             -------------cCCCCccHHHHHHHHHHHHHHHHHHHhh---hcCeEEEEEecccccCcHHHhhcccCHHHHHHHHhc
Confidence                         6778889999999999999999999997   789999999999997 6644332 211111111122


Q ss_pred             HHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017812          292 KLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  329 (365)
Q Consensus       292 ~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~  329 (365)
                      .|++++.+|+|+|+.+++++... ...+|.++..++|..
T Consensus       213 ~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~~gg~~  251 (264)
T PRK07576        213 VPLKRNGTKQDIANAALFLASDMASYITGVVLPVDGGWS  251 (264)
T ss_pred             CCCCCCCCHHHHHHHHHHHcChhhcCccCCEEEECCCcc
Confidence            35677889999999999655321 245899998888864

>PRK07890 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1e-34  Score=262.44  Aligned_cols=240  Identities=23%  Similarity=0.248  Sum_probs=198.1

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      +++|+++||||++|||+++|++|+++|++|++++|+++++++..+++...  +.++.++.+|++|.+++.++++++.+  
T Consensus         3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~--   78 (258)
T PRK07890          3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDL--GRRALAVPTDITDEDQCANLVALALE--   78 (258)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHh--CCceEEEecCCCCHHHHHHHHHHHHH--
Confidence            56899999999999999999999999999999999998888887777654  45689999999999999999999887  


Q ss_pred             hccCCCCCeeEEEecCCccc---CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          137 LDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                          .++++|++|||||...   +..+.+.+++++++++|+.|++.+++++.|.|.+++  ++||++||..+.       
T Consensus        79 ----~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~ii~~sS~~~~-------  145 (258)
T PRK07890         79 ----RFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESG--GSIVMINSMVLR-------  145 (258)
T ss_pred             ----HcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC--CEEEEEechhhc-------
Confidence                5688999999999753   344678899999999999999999999999997764  799999999877       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccch----------hHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP----------SFL  283 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~----------~~~  283 (365)
                                   .+.++...|+++|++++.++++++.|+.   .++|++++++||++.|++.....          ...
T Consensus       146 -------------~~~~~~~~Y~~sK~a~~~l~~~~a~~~~---~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~  209 (258)
T PRK07890        146 -------------HSQPKYGAYKMAKGALLAASQSLATELG---PQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQ  209 (258)
T ss_pred             -------------cCCCCcchhHHHHHHHHHHHHHHHHHHh---hcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHH
Confidence                         6777888999999999999999999997   78999999999999998754311          011


Q ss_pred             HHHHHHHHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017812          284 SLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  329 (365)
Q Consensus       284 ~~~~~~~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~  329 (365)
                      .........+.+++.+|+|+|+++++++... ...+|+.+..++|+.
T Consensus       210 ~~~~~~~~~~~~~~~~~~dva~a~~~l~~~~~~~~~G~~i~~~gg~~  256 (258)
T PRK07890        210 IYAETAANSDLKRLPTDDEVASAVLFLASDLARAITGQTLDVNCGEY  256 (258)
T ss_pred             HHHHHhhcCCccccCCHHHHHHHHHHHcCHhhhCccCcEEEeCCccc
Confidence            1111112235567889999999998544321 256788887777753

>PRK06701 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-34  Score=265.17  Aligned_cols=241  Identities=22%  Similarity=0.232  Sum_probs=196.9

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCch-hHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHH
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH-LLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  133 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~  133 (365)
                      .++++|++|||||++|||.++|++|+++|++|++++|+.+ ..++..+.+...  +.++.++.+|++|.+++.++++++.
T Consensus        42 ~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~i~  119 (290)
T PRK06701         42 GKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKE--GVKCLLIPGDVSDEAFCKDAVEETV  119 (290)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999999864 345555555433  4578899999999999999999988


Q ss_pred             HHHhccCCCCCeeEEEecCCccc---CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc
Q 017812          134 QWLLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN  210 (365)
Q Consensus       134 ~~~~~~~~~~~id~lv~nAG~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~  210 (365)
                      +      ..+++|++|||||...   +..+.+.+++++++++|+.+++.++++++|.|.+   .++||++||.++.    
T Consensus       120 ~------~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~---~g~iV~isS~~~~----  186 (290)
T PRK06701        120 R------ELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQ---GSAIINTGSITGY----  186 (290)
T ss_pred             H------HcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhh---CCeEEEEeccccc----
Confidence            7      5678999999999753   3456788999999999999999999999999954   3799999999887    


Q ss_pred             ccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHH
Q 017812          211 AQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTV  290 (365)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~  290 (365)
                                      .+.+....|++||+|++.++++++.++.   +.||+|++|+||+++|++.+.............
T Consensus       187 ----------------~~~~~~~~Y~~sK~a~~~l~~~la~~~~---~~gIrv~~i~pG~v~T~~~~~~~~~~~~~~~~~  247 (290)
T PRK06701        187 ----------------EGNETLIDYSATKGAIHAFTRSLAQSLV---QKGIRVNAVAPGPIWTPLIPSDFDEEKVSQFGS  247 (290)
T ss_pred             ----------------CCCCCcchhHHHHHHHHHHHHHHHHHhh---hcCeEEEEEecCCCCCcccccccCHHHHHHHHh
Confidence                            5667778899999999999999999998   789999999999999998764321111111222


Q ss_pred             HHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017812          291 LKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  329 (365)
Q Consensus       291 ~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~  329 (365)
                      ..+++++.+|+|+|+++++++... ...+|..+..++|..
T Consensus       248 ~~~~~~~~~~~dva~~~~~ll~~~~~~~~G~~i~idgg~~  287 (290)
T PRK06701        248 NTPMQRPGQPEELAPAYVFLASPDSSYITGQMLHVNGGVI  287 (290)
T ss_pred             cCCcCCCcCHHHHHHHHHHHcCcccCCccCcEEEeCCCcc
Confidence            345677889999999999654432 346899998888754

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=100.00  E-value=1.8e-34  Score=259.00  Aligned_cols=239  Identities=22%  Similarity=0.279  Sum_probs=195.0

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEE-ecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLV-GRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      +++|+++||||++|||+++|++|+++|++|++. .++..+.++..+++...  +.++..+.+|++|.+++.++++++.+ 
T Consensus         1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~-   77 (246)
T PRK12938          1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKAL--GFDFIASEGNVGDWDSTKAAFDKVKA-   77 (246)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHH-
Confidence            468999999999999999999999999998885 45555566666666543  45788899999999999999999888 


Q ss_pred             HhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                           ..+++|+||||||...  +..+.+.+++++++++|+.+++.++++++|.|.+++ .++||++||..+.       
T Consensus        78 -----~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~-------  144 (246)
T PRK12938         78 -----EVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERG-WGRIINISSVNGQ-------  144 (246)
T ss_pred             -----HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEEechhcc-------
Confidence                 5688999999999864  345678999999999999999999999999998765 6899999999877       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  293 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  293 (365)
                                   .+.++...|+++|++++.+++++++++.   ..||++++|+||+++|++.+...+.. ........+
T Consensus       145 -------------~~~~~~~~y~~sK~a~~~~~~~l~~~~~---~~gi~v~~i~pg~~~t~~~~~~~~~~-~~~~~~~~~  207 (246)
T PRK12938        145 -------------KGQFGQTNYSTAKAGIHGFTMSLAQEVA---TKGVTVNTVSPGYIGTDMVKAIRPDV-LEKIVATIP  207 (246)
T ss_pred             -------------CCCCCChhHHHHHHHHHHHHHHHHHHhh---hhCeEEEEEEecccCCchhhhcChHH-HHHHHhcCC
Confidence                         6777888999999999999999999997   78999999999999999876542211 111112234


Q ss_pred             hcCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCc
Q 017812          294 LGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGR  328 (365)
Q Consensus       294 ~~~~~~p~e~A~~i~~~~l~-~~~~~G~~~~~~~g~  328 (365)
                      ..++.+|+++++.+++++.. +...+|+.+..++|.
T Consensus       208 ~~~~~~~~~v~~~~~~l~~~~~~~~~g~~~~~~~g~  243 (246)
T PRK12938        208 VRRLGSPDEIGSIVAWLASEESGFSTGADFSLNGGL  243 (246)
T ss_pred             ccCCcCHHHHHHHHHHHcCcccCCccCcEEEECCcc
Confidence            56788999999999954432 235678888877764

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=3.8e-35  Score=242.16  Aligned_cols=182  Identities=27%  Similarity=0.369  Sum_probs=168.0

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      +.|.++|||||++|||+++|++|.+.|.+|++++|++++++++.++      ...++...||+.|.++++++++.+++  
T Consensus         3 ~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~------~p~~~t~v~Dv~d~~~~~~lvewLkk--   74 (245)
T COG3967           3 TTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAE------NPEIHTEVCDVADRDSRRELVEWLKK--   74 (245)
T ss_pred             ccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhc------CcchheeeecccchhhHHHHHHHHHh--
Confidence            5799999999999999999999999999999999999999888777      46789999999999999999999998  


Q ss_pred             hccCCCCCeeEEEecCCcccCC----CCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017812          137 LDSDMHSSIQLLINNAGILATS----SRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~~~----~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~  212 (365)
                          .+..+++||||||+....    .+.+.+..++.+++|+.+++++++.++|++.+++ .+.||+|||..+.      
T Consensus        75 ----~~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~-~a~IInVSSGLaf------  143 (245)
T COG3967          75 ----EYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQP-EATIINVSSGLAF------  143 (245)
T ss_pred             ----hCCchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCC-CceEEEecccccc------
Confidence                788999999999998543    2345677889999999999999999999999987 7999999999998      


Q ss_pred             CCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCC
Q 017812          213 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTN  274 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~  274 (365)
                                    .|......|+++|+|+..|+.+|+..+.   ..+|.|.-+.|-.|+|+
T Consensus       144 --------------vPm~~~PvYcaTKAaiHsyt~aLR~Qlk---~t~veVIE~~PP~V~t~  188 (245)
T COG3967         144 --------------VPMASTPVYCATKAAIHSYTLALREQLK---DTSVEVIELAPPLVDTT  188 (245)
T ss_pred             --------------CcccccccchhhHHHHHHHHHHHHHHhh---hcceEEEEecCCceecC
Confidence                          8888889999999999999999999997   78999999999999996

>PRK07825 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-34  Score=264.54  Aligned_cols=212  Identities=23%  Similarity=0.266  Sum_probs=185.2

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      +++++++|||||||||+++|++|+++|++|++++|++++++++.+++.      ++.++.+|++|++++.++++++.+  
T Consensus         3 ~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~------~~~~~~~D~~~~~~~~~~~~~~~~--   74 (273)
T PRK07825          3 LRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG------LVVGGPLDVTDPASFAAFLDAVEA--   74 (273)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc------cceEEEccCCCHHHHHHHHHHHHH--
Confidence            678999999999999999999999999999999999988877766652      477899999999999999999988  


Q ss_pred             hccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017812          137 LDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  214 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~  214 (365)
                          .++++|++|||||+..  +..+.+.+.+++++++|+.|++.+++.++|.|.+++ .|+||++||.++.        
T Consensus        75 ----~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~--------  141 (273)
T PRK07825         75 ----DLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRG-RGHVVNVASLAGK--------  141 (273)
T ss_pred             ----HcCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CCEEEEEcCcccc--------
Confidence                5688999999999863  345668899999999999999999999999998876 6899999999988        


Q ss_pred             CccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHh
Q 017812          215 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLL  294 (365)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  294 (365)
                                  .+.++...|++||+++.+|+++++.|+.   +.||++++|+||+++|++....+..          ..
T Consensus       142 ------------~~~~~~~~Y~asKaa~~~~~~~l~~el~---~~gi~v~~v~Pg~v~t~~~~~~~~~----------~~  196 (273)
T PRK07825        142 ------------IPVPGMATYCASKHAVVGFTDAARLELR---GTGVHVSVVLPSFVNTELIAGTGGA----------KG  196 (273)
T ss_pred             ------------CCCCCCcchHHHHHHHHHHHHHHHHHhh---ccCcEEEEEeCCcCcchhhcccccc----------cC
Confidence                        7788889999999999999999999997   7899999999999999987654221          01


Q ss_pred             cCCCCHHHHHHHHHHHhcCC
Q 017812          295 GLLQSPEKGINSVLDAALAP  314 (365)
Q Consensus       295 ~~~~~p~e~A~~i~~~~l~~  314 (365)
                      ....+|+++|+.++.++..+
T Consensus       197 ~~~~~~~~va~~~~~~l~~~  216 (273)
T PRK07825        197 FKNVEPEDVAAAIVGTVAKP  216 (273)
T ss_pred             CCCCCHHHHHHHHHHHHhCC
Confidence            13569999999999766543

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=8.9e-35  Score=288.61  Aligned_cols=238  Identities=25%  Similarity=0.305  Sum_probs=197.2

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      .++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++     +.++.++++|++|+++++++++++.+  
T Consensus         3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~--   75 (520)
T PRK06484          3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL-----GPDHHALAMDVSDEAQIREGFEQLHR--   75 (520)
T ss_pred             CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceeEEEeccCCHHHHHHHHHHHHH--
Confidence            46899999999999999999999999999999999998887776665     44678899999999999999999988  


Q ss_pred             hccCCCCCeeEEEecCCccc----CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017812          137 LDSDMHSSIQLLINNAGILA----TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~----~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~  212 (365)
                          .++++|+||||||+..    +..+.+.+++++++++|+.+++.++++++|+|.+++.+++||++||.++.      
T Consensus        76 ----~~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~------  145 (520)
T PRK06484         76 ----EFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGL------  145 (520)
T ss_pred             ----HhCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccC------
Confidence                5688999999999842    34577899999999999999999999999999876533599999999988      


Q ss_pred             CCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHH--HHHHHH
Q 017812          213 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLS--LMAFTV  290 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~--~~~~~~  290 (365)
                                    .+.+....|++||+|+++|+++++.|+.   +.||+|++|+||+|+|++.........  ......
T Consensus       146 --------------~~~~~~~~Y~asKaal~~l~~~la~e~~---~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~  208 (520)
T PRK06484        146 --------------VALPKRTAYSASKAAVISLTRSLACEWA---AKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVRS  208 (520)
T ss_pred             --------------CCCCCCchHHHHHHHHHHHHHHHHHHhh---hhCeEEEEEccCCcCchhhhhhcccchhhhHHHHh
Confidence                          7778889999999999999999999998   789999999999999999764322111  111112


Q ss_pred             HHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCc
Q 017812          291 LKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  328 (365)
Q Consensus       291 ~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~  328 (365)
                      ..+.+++.+|+++|+.+++++... ...+|..+..++|.
T Consensus       209 ~~~~~~~~~~~~va~~v~~l~~~~~~~~~G~~~~~~gg~  247 (520)
T PRK06484        209 RIPLGRLGRPEEIAEAVFFLASDQASYITGSTLVVDGGW  247 (520)
T ss_pred             cCCCCCCcCHHHHHHHHHHHhCccccCccCceEEecCCe
Confidence            234567789999999999655432 35577777766653

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3e-34  Score=259.22  Aligned_cols=236  Identities=21%  Similarity=0.231  Sum_probs=191.5

Q ss_pred             CCCCEEEEecCCC--hHHHHHHHHHHHCCCEEEEEecC-----------chhHHHHHHHHHhhcCCCceEEEEecCCChh
Q 017812           57 IKRPVCIVTGATS--GLGAAAAYALSREGFHVVLVGRS-----------SHLLSETMADITSRNKDARLEAFQVDLSSFQ  123 (365)
Q Consensus        57 ~~~k~vlITGass--GIG~~~a~~la~~G~~Vil~~r~-----------~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~  123 (365)
                      +++|+++||||++  |||.++|++|+++|++|++++|+           ........+++...  +.+++++++|+++.+
T Consensus         3 l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~   80 (256)
T PRK12748          3 LMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESY--GVRCEHMEIDLSQPY   80 (256)
T ss_pred             CCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhc--CCeEEEEECCCCCHH
Confidence            6789999999994  99999999999999999999998           22222244444333  457899999999999


Q ss_pred             hHHHHHHHHHHHHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEc
Q 017812          124 SVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVT  201 (365)
Q Consensus       124 ~v~~~~~~~~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vs  201 (365)
                      ++..+++++.+      .++++|++|||||+..  +..+.+.+++++.+++|+.|++.++++++|.|.++. .++||++|
T Consensus        81 ~~~~~~~~~~~------~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~s  153 (256)
T PRK12748         81 APNRVFYAVSE------RLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKA-GGRIINLT  153 (256)
T ss_pred             HHHHHHHHHHH------hCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcC-CeEEEEEC
Confidence            99999999988      6688999999999863  345678899999999999999999999999997654 68999999


Q ss_pred             CCcccccccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh
Q 017812          202 SFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS  281 (365)
Q Consensus       202 S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~  281 (365)
                      |..+.                    .+.++...|++||+|+++++++++.|+.   .+||+|++++||+++|++......
T Consensus       154 s~~~~--------------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~~i~v~~i~Pg~~~t~~~~~~~~  210 (256)
T PRK12748        154 SGQSL--------------------GPMPDELAYAATKGAIEAFTKSLAPELA---EKGITVNAVNPGPTDTGWITEELK  210 (256)
T ss_pred             Ccccc--------------------CCCCCchHHHHHHHHHHHHHHHHHHHHH---HhCeEEEEEEeCcccCCCCChhHH
Confidence            99877                    6667788999999999999999999997   789999999999999997643111


Q ss_pred             HHHHHHHHHHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCc
Q 017812          282 FLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  328 (365)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~  328 (365)
                          .......+.+++.+|+|+|+.+.+++... ...+|+++..|+|.
T Consensus       211 ----~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d~g~  254 (256)
T PRK12748        211 ----HHLVPKFPQGRVGEPVDAARLIAFLVSEEAKWITGQVIHSEGGF  254 (256)
T ss_pred             ----HhhhccCCCCCCcCHHHHHHHHHHHhCcccccccCCEEEecCCc
Confidence                11111234456789999999999654432 35679999887763

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=3.5e-34  Score=257.28  Aligned_cols=240  Identities=22%  Similarity=0.298  Sum_probs=196.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEec-CchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGR-SSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      ++++|+++||||++|||.++|++|+++|++|+++.+ +++..++..+++...  +.++.++.+|++|++++.++++++.+
T Consensus         3 ~~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (247)
T PRK12935          3 QLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKE--GHDVYAVQADVSKVEDANRLVEEAVN   80 (247)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            467899999999999999999999999999987654 556666666666543  45789999999999999999999988


Q ss_pred             HHhccCCCCCeeEEEecCCcccC--CCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017812          135 WLLDSDMHSSIQLLINNAGILAT--SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~~--~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~  212 (365)
                            ..+++|++|||||....  ..+.+.+++++++++|+.+++.++++++|.|.+++ .++||++||..+.      
T Consensus        81 ------~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~------  147 (247)
T PRK12935         81 ------HFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAE-EGRIISISSIIGQ------  147 (247)
T ss_pred             ------HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcchhhc------
Confidence                  56889999999998643  34567899999999999999999999999998765 6899999998877      


Q ss_pred             CCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHH
Q 017812          213 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLK  292 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~  292 (365)
                                    .+.++...|++||+|+++++++++.++.   +.||+++.++||+++|++....+..... ......
T Consensus       148 --------------~~~~~~~~Y~~sK~a~~~~~~~l~~~~~---~~~i~v~~v~pg~v~t~~~~~~~~~~~~-~~~~~~  209 (247)
T PRK12935        148 --------------AGGFGQTNYSAAKAGMLGFTKSLALELA---KTNVTVNAICPGFIDTEMVAEVPEEVRQ-KIVAKI  209 (247)
T ss_pred             --------------CCCCCCcchHHHHHHHHHHHHHHHHHHH---HcCcEEEEEEeCCCcChhhhhccHHHHH-HHHHhC
Confidence                          5667788999999999999999999997   7899999999999999987665432221 111222


Q ss_pred             HhcCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCc
Q 017812          293 LLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGR  328 (365)
Q Consensus       293 ~~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~  328 (365)
                      +.+++.+|+|+|+++++++..+...+|+.+..++|.
T Consensus       210 ~~~~~~~~edva~~~~~~~~~~~~~~g~~~~i~~g~  245 (247)
T PRK12935        210 PKKRFGQADEIAKGVVYLCRDGAYITGQQLNINGGL  245 (247)
T ss_pred             CCCCCcCHHHHHHHHHHHcCcccCccCCEEEeCCCc
Confidence            345678999999999975543334678888877764

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.9e-34  Score=267.04  Aligned_cols=239  Identities=24%  Similarity=0.223  Sum_probs=192.9

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecC-chhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHH
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRS-SHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  133 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~  133 (365)
                      .+++||+++||||++|||+++|++|+++|++|++.+++ .+..+++.+++...  +.++.++++|++|.+++.++++++.
T Consensus         8 ~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~--g~~~~~~~~Dv~d~~~~~~~~~~~~   85 (306)
T PRK07792          8 TDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAA--GAKAVAVAGDISQRATADELVATAV   85 (306)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhc--CCeEEEEeCCCCCHHHHHHHHHHHH
Confidence            45889999999999999999999999999999999985 45677777777654  4578899999999999999999887


Q ss_pred             HHHhccCCCCCeeEEEecCCcccC--CCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCC------CCCeEEEEcCCcc
Q 017812          134 QWLLDSDMHSSIQLLINNAGILAT--SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP------VPSRIVNVTSFTH  205 (365)
Q Consensus       134 ~~~~~~~~~~~id~lv~nAG~~~~--~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~------~~g~iV~vsS~~~  205 (365)
                      +       ++++|+||||||+..+  ..+.+.+++++.+++|+.|+++++++++|+|+++.      ..|+||++||.++
T Consensus        86 ~-------~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~  158 (306)
T PRK07792         86 G-------LGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAG  158 (306)
T ss_pred             H-------hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCccc
Confidence            5       3789999999998743  34678899999999999999999999999997531      1379999999988


Q ss_pred             cccccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHH
Q 017812          206 RNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSL  285 (365)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~  285 (365)
                      .                    .+.++...|++||+|+++|+++++.|+.   ++||+||+|+|| +.|+|..........
T Consensus       159 ~--------------------~~~~~~~~Y~asKaal~~l~~~la~e~~---~~gI~vn~i~Pg-~~t~~~~~~~~~~~~  214 (306)
T PRK07792        159 L--------------------VGPVGQANYGAAKAGITALTLSAARALG---RYGVRANAICPR-ARTAMTADVFGDAPD  214 (306)
T ss_pred             c--------------------cCCCCCchHHHHHHHHHHHHHHHHHHhh---hcCeEEEEECCC-CCCchhhhhccccch
Confidence            7                    6677788999999999999999999998   789999999999 488876442111000


Q ss_pred             HHHHHHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017812          286 MAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  330 (365)
Q Consensus       286 ~~~~~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~  330 (365)
                      ...    ......+|+++|..+.+++... ...+|+++..++|...
T Consensus       215 ~~~----~~~~~~~pe~va~~v~~L~s~~~~~~tG~~~~v~gg~~~  256 (306)
T PRK07792        215 VEA----GGIDPLSPEHVVPLVQFLASPAAAEVNGQVFIVYGPMVT  256 (306)
T ss_pred             hhh----hccCCCCHHHHHHHHHHHcCccccCCCCCEEEEcCCeEE
Confidence            000    1112358999999999554332 2568999988887643

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=100.00  E-value=2.4e-34  Score=257.07  Aligned_cols=232  Identities=19%  Similarity=0.227  Sum_probs=192.0

Q ss_pred             EEEecCCChHHHHHHHHHHHCCCEEEEEecC-chhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhccC
Q 017812           62 CIVTGATSGLGAAAAYALSREGFHVVLVGRS-SHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  140 (365)
Q Consensus        62 vlITGassGIG~~~a~~la~~G~~Vil~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~~  140 (365)
                      ++||||++|||+++|++|+++|++|++++|+ .+++++..+++...  +.++.++++|++|.+++.++++++.+      
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~------   72 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQ--GGNARLLQFDVADRVACRTLLEADIA------   72 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc--CCeEEEEEccCCCHHHHHHHHHHHHH------
Confidence            5899999999999999999999999999875 45666777777654  45789999999999999999998877      


Q ss_pred             CCCCeeEEEecCCcccC--CCCCCHHHHhHhHHHHhHHHHHHHHHHh-HhhhcCCCCCeEEEEcCCcccccccccCCCcc
Q 017812          141 MHSSIQLLINNAGILAT--SSRLTPEGYDQMMSTNYIGAFFLTKLLL-PLLKNSPVPSRIVNVTSFTHRNVFNAQVNNET  217 (365)
Q Consensus       141 ~~~~id~lv~nAG~~~~--~~~~~~~~~~~~~~vN~~~~~~l~~~~l-~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~  217 (365)
                      .++++|++|||||+...  ..+.+.++++.++++|+.+++++++.++ |.+++++ .|+||++||.++.           
T Consensus        73 ~~~~i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~iv~vsS~~~~-----------  140 (239)
T TIGR01831        73 EHGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQ-GGRIITLASVSGV-----------  140 (239)
T ss_pred             HcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcC-CeEEEEEcchhhc-----------
Confidence            56889999999998643  3467889999999999999999999875 5554444 6899999999887           


Q ss_pred             ccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhcCC
Q 017812          218 ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLL  297 (365)
Q Consensus       218 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  297 (365)
                               .+.++...|++||+++++++++++.|+.   ..||++++++||+++|++.+..++...  ......|++++
T Consensus       141 ---------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~--~~~~~~~~~~~  206 (239)
T TIGR01831       141 ---------MGNRGQVNYSAAKAGLIGATKALAVELA---KRKITVNCIAPGLIDTEMLAEVEHDLD--EALKTVPMNRM  206 (239)
T ss_pred             ---------cCCCCCcchHHHHHHHHHHHHHHHHHHh---HhCeEEEEEEEccCccccchhhhHHHH--HHHhcCCCCCC
Confidence                     6777888999999999999999999998   789999999999999999876543221  12223467788


Q ss_pred             CCHHHHHHHHHHHhcC-CCCCcccEEeCCCC
Q 017812          298 QSPEKGINSVLDAALA-PPETSGVYFFGGKG  327 (365)
Q Consensus       298 ~~p~e~A~~i~~~~l~-~~~~~G~~~~~~~g  327 (365)
                      .+|+|+|+.+++++.. +...+|..+..++|
T Consensus       207 ~~~~~va~~~~~l~~~~~~~~~g~~~~~~gg  237 (239)
T TIGR01831       207 GQPAEVASLAGFLMSDGASYVTRQVISVNGG  237 (239)
T ss_pred             CCHHHHHHHHHHHcCchhcCccCCEEEecCC
Confidence            9999999999965443 23667888877776

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK06500 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.7e-34  Score=257.31  Aligned_cols=236  Identities=26%  Similarity=0.375  Sum_probs=192.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      .+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++     +.++.++++|++|.+++..+++.+.+ 
T Consensus         3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~-   76 (249)
T PRK06500          3 RLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL-----GESALVIRADAGDVAAQKALAQALAE-   76 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh-----CCceEEEEecCCCHHHHHHHHHHHHH-
Confidence            367899999999999999999999999999999999987776665554     45688999999999999999999887 


Q ss_pred             HhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                           ..+++|++|||||...  +..+.+.+++++++++|+.+++.++++++|+|.+   .+++|+++|.++.       
T Consensus        77 -----~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~~i~~~S~~~~-------  141 (249)
T PRK06500         77 -----AFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLAN---PASIVLNGSINAH-------  141 (249)
T ss_pred             -----HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc---CCEEEEEechHhc-------
Confidence                 5578999999999863  3346788999999999999999999999999864   3789999998876       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc--hh-HHH-H-HHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV--PS-FLS-L-MAF  288 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~--~~-~~~-~-~~~  288 (365)
                                   .+.+....|++||+++++++++++.|+.   .+||++++++||.++|++.+..  .. ... . ...
T Consensus       142 -------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~  205 (249)
T PRK06500        142 -------------IGMPNSSVYAASKAALLSLAKTLSGELL---PRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQI  205 (249)
T ss_pred             -------------cCCCCccHHHHHHHHHHHHHHHHHHHhh---hcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHH
Confidence                         6677788999999999999999999997   7899999999999999986532  11 111 1 111


Q ss_pred             HHHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCc
Q 017812          289 TVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  328 (365)
Q Consensus       289 ~~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~  328 (365)
                      ....+++++.+|+|+|+++++++... ...+|..+..++|.
T Consensus       206 ~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~~gg~  246 (249)
T PRK06500        206 QALVPLGRFGTPEEIAKAVLYLASDESAFIVGSEIIVDGGM  246 (249)
T ss_pred             HhcCCCCCCcCHHHHHHHHHHHcCccccCccCCeEEECCCc
Confidence            12235567889999999999654322 25578888777774

>PRK05855 short chain dehydrogenase; Validated

Probab=100.00  E-value=2.6e-34  Score=288.88  Aligned_cols=229  Identities=25%  Similarity=0.266  Sum_probs=193.7

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      ..+++++++|||||||||+++|++|+++|++|++++|+.++++++.++++..  +.++.++++|++|++++.++++++.+
T Consensus       311 ~~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~  388 (582)
T PRK05855        311 GPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAA--GAVAHAYRVDVSDADAMEAFAEWVRA  388 (582)
T ss_pred             ccCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            3467899999999999999999999999999999999999999888888665  34789999999999999999999987


Q ss_pred             HHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017812          135 WLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~  212 (365)
                            .++++|+||||||+..  +..+.+.+++++++++|+.|++.++++++|.|.+++..|+||++||.+++      
T Consensus       389 ------~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~------  456 (582)
T PRK05855        389 ------EHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAY------  456 (582)
T ss_pred             ------hcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhc------
Confidence                  6689999999999863  34577899999999999999999999999999887545899999999988      


Q ss_pred             CCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh--H----H-HH
Q 017812          213 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS--F----L-SL  285 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~--~----~-~~  285 (365)
                                    .+.++...|++||+|+++++++|+.|++   +.||+|++|+||+|+|++.+....  .    . ..
T Consensus       457 --------------~~~~~~~~Y~~sKaa~~~~~~~l~~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~  519 (582)
T PRK05855        457 --------------APSRSLPAYATSKAAVLMLSECLRAELA---AAGIGVTAICPGFVDTNIVATTRFAGADAEDEARR  519 (582)
T ss_pred             --------------cCCCCCcHHHHHHHHHHHHHHHHHHHhc---ccCcEEEEEEeCCCcccchhccccCCcccchhhhH
Confidence                          7778889999999999999999999998   789999999999999998765321  0    0 00


Q ss_pred             HHHHHHHHhcCCCCHHHHHHHHHHHhcCC
Q 017812          286 MAFTVLKLLGLLQSPEKGINSVLDAALAP  314 (365)
Q Consensus       286 ~~~~~~~~~~~~~~p~e~A~~i~~~~l~~  314 (365)
                      .......+..+..+||++|+.+++++..+
T Consensus       520 ~~~~~~~~~~~~~~p~~va~~~~~~~~~~  548 (582)
T PRK05855        520 RGRADKLYQRRGYGPEKVAKAIVDAVKRN  548 (582)
T ss_pred             HhhhhhhccccCCCHHHHHHHHHHHHHcC
Confidence            01111112234469999999999877553

>PRK12937 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.4e-34  Score=256.19  Aligned_cols=237  Identities=28%  Similarity=0.323  Sum_probs=193.9

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCc-hhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS-HLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      +++|+++||||++|||+++|++|+++|++|+++.|+. +..++..+++...  +.++.++++|+++.+++.++++++.+ 
T Consensus         3 ~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~-   79 (245)
T PRK12937          3 LSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAA--GGRAIAVQADVADAAAVTRLFDAAET-   79 (245)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHH-
Confidence            5789999999999999999999999999999888764 4456666666544  45789999999999999999999988 


Q ss_pred             HhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                           .++++|++|||||+..  +..+.+.+++++++++|+.+++.++++++|.|.+   .++||++||.++.       
T Consensus        80 -----~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~~ss~~~~-------  144 (245)
T PRK12937         80 -----AFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQ---GGRIINLSTSVIA-------  144 (245)
T ss_pred             -----HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhcc---CcEEEEEeecccc-------
Confidence                 5688999999999863  3456688999999999999999999999999865   4799999998877       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  293 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  293 (365)
                                   .+.++...|++||++++.++++++.++.   ..||++++++||+++|++.................|
T Consensus       145 -------------~~~~~~~~Y~~sK~a~~~~~~~~a~~~~---~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~  208 (245)
T PRK12937        145 -------------LPLPGYGPYAASKAAVEGLVHVLANELR---GRGITVNAVAPGPVATELFFNGKSAEQIDQLAGLAP  208 (245)
T ss_pred             -------------CCCCCCchhHHHHHHHHHHHHHHHHHhh---hcCeEEEEEEeCCccCchhcccCCHHHHHHHHhcCC
Confidence                         6777889999999999999999999997   789999999999999998643211111222223346


Q ss_pred             hcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCC
Q 017812          294 LGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKG  327 (365)
Q Consensus       294 ~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g  327 (365)
                      +++..+|+|+|+.+++++... ...+|.++..++|
T Consensus       209 ~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g  243 (245)
T PRK12937        209 LERLGTPEEIAAAVAFLAGPDGAWVNGQVLRVNGG  243 (245)
T ss_pred             CCCCCCHHHHHHHHHHHcCccccCccccEEEeCCC
Confidence            677889999999999544222 2457888887765

>PRK06138 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.7e-34  Score=257.08  Aligned_cols=240  Identities=24%  Similarity=0.261  Sum_probs=199.5

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      +++|+++||||+||||.++|++|+++|++|++++|+.+..++..+++.   .+.++.++++|++|+++++++++++.+  
T Consensus         3 ~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~i~~--   77 (252)
T PRK06138          3 LAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA---AGGRAFARQGDVGSAEAVEALVDFVAA--   77 (252)
T ss_pred             CCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh---cCCeEEEEEcCCCCHHHHHHHHHHHHH--
Confidence            679999999999999999999999999999999999988877777665   246789999999999999999999988  


Q ss_pred             hccCCCCCeeEEEecCCcccC--CCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017812          137 LDSDMHSSIQLLINNAGILAT--SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  214 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~~--~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~  214 (365)
                          ..+++|++|||||....  ..+.+.+++++++++|+.+++.+++.++|.|++++ .++||++||..+.        
T Consensus        78 ----~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~sS~~~~--------  144 (252)
T PRK06138         78 ----RWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQG-GGSIVNTASQLAL--------  144 (252)
T ss_pred             ----HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcC-CeEEEEECChhhc--------
Confidence                56889999999998643  34668899999999999999999999999998765 6899999999877        


Q ss_pred             CccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH-----HHHHHHH
Q 017812          215 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF-----LSLMAFT  289 (365)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~-----~~~~~~~  289 (365)
                                  .+.++...|+.||++++.++++++.|+.   ..||++++++||++.|++..+....     .......
T Consensus       145 ------------~~~~~~~~Y~~sK~a~~~~~~~l~~~~~---~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~  209 (252)
T PRK06138        145 ------------AGGRGRAAYVASKGAIASLTRAMALDHA---TDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALR  209 (252)
T ss_pred             ------------cCCCCccHHHHHHHHHHHHHHHHHHHHH---hcCeEEEEEEECCccCcchhhhhccccChHHHHHHHH
Confidence                        6667788999999999999999999997   7899999999999999987643211     1011111


Q ss_pred             HHHHhcCCCCHHHHHHHHHHHhcCCC-CCcccEEeCCCCcc
Q 017812          290 VLKLLGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKGRT  329 (365)
Q Consensus       290 ~~~~~~~~~~p~e~A~~i~~~~l~~~-~~~G~~~~~~~g~~  329 (365)
                      ...+..++.+|+|+|+.+++++.... ..+|.++..++|..
T Consensus       210 ~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g~~  250 (252)
T PRK06138        210 ARHPMNRFGTAEEVAQAALFLASDESSFATGTTLVVDGGWL  250 (252)
T ss_pred             hcCCCCCCcCHHHHHHHHHHHcCchhcCccCCEEEECCCee
Confidence            12244457799999999997654432 56799998887753

>PRK12742 oxidoreductase; Provisional

Probab=100.00  E-value=4.2e-34  Score=255.11  Aligned_cols=229  Identities=17%  Similarity=0.193  Sum_probs=181.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEec-CchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGR-SSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      .+++|+++||||+||||+++|++|+++|++|++++| +.+..+++.+++       .+.++.+|++|.+++.+++++   
T Consensus         3 ~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~-------~~~~~~~D~~~~~~~~~~~~~---   72 (237)
T PRK12742          3 AFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQET-------GATAVQTDSADRDAVIDVVRK---   72 (237)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHh-------CCeEEecCCCCHHHHHHHHHH---
Confidence            467999999999999999999999999999998876 445554443332       246788999999888776542   


Q ss_pred             HHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017812          135 WLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~  212 (365)
                             .+++|++|||||...  +..+.+++++++++++|+.+++.+++.++|.|.+   .|+||++||..+.      
T Consensus        73 -------~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~g~iv~isS~~~~------  136 (237)
T PRK12742         73 -------SGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPE---GGRIIIIGSVNGD------  136 (237)
T ss_pred             -------hCCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhc---CCeEEEEeccccc------
Confidence                   367999999999863  3456788999999999999999999999999964   4799999998763      


Q ss_pred             CCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHH
Q 017812          213 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLK  292 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~  292 (365)
                                   ..+.++...|++||++++.++++++.++.   ++||+|++|+||+++|++.....+..  .......
T Consensus       137 -------------~~~~~~~~~Y~~sKaa~~~~~~~la~~~~---~~gi~v~~v~Pg~~~t~~~~~~~~~~--~~~~~~~  198 (237)
T PRK12742        137 -------------RMPVAGMAAYAASKSALQGMARGLARDFG---PRGITINVVQPGPIDTDANPANGPMK--DMMHSFM  198 (237)
T ss_pred             -------------cCCCCCCcchHHhHHHHHHHHHHHHHHHh---hhCeEEEEEecCcccCCccccccHHH--HHHHhcC
Confidence                         04567788999999999999999999997   78999999999999999876432221  1112223


Q ss_pred             HhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCc
Q 017812          293 LLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  328 (365)
Q Consensus       293 ~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~  328 (365)
                      +++|+.+|+|+|+.+++++... ...+|..+..|+|.
T Consensus       199 ~~~~~~~p~~~a~~~~~l~s~~~~~~~G~~~~~dgg~  235 (237)
T PRK12742        199 AIKRHGRPEEVAGMVAWLAGPEASFVTGAMHTIDGAF  235 (237)
T ss_pred             CCCCCCCHHHHHHHHHHHcCcccCcccCCEEEeCCCc
Confidence            5678899999999999544221 24589999888774

>PRK08263 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.7e-34  Score=260.13  Aligned_cols=237  Identities=21%  Similarity=0.309  Sum_probs=194.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .+|+++||||+||||++++++|+++|++|++++|+.++++++.+.+     +..+.++++|++|++++.++++++.+   
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~---   73 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY-----GDRLLPLALDVTDRAAVFAAVETAVE---   73 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc-----cCCeeEEEccCCCHHHHHHHHHHHHH---
Confidence            4689999999999999999999999999999999988776655443     34678899999999999999999887   


Q ss_pred             ccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCC
Q 017812          138 DSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNN  215 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~  215 (365)
                         ..+++|++|||||+..  +..+.+.+++++++++|+.+++.+++.++|.|++++ .++||++||.++.         
T Consensus        74 ---~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~vsS~~~~---------  140 (275)
T PRK08263         74 ---HFGRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQR-SGHIIQISSIGGI---------  140 (275)
T ss_pred             ---HcCCCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEcChhhc---------
Confidence               5678999999999874  345678899999999999999999999999998765 6899999999887         


Q ss_pred             ccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc-------hhHHHH-HH
Q 017812          216 ETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV-------PSFLSL-MA  287 (365)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~-------~~~~~~-~~  287 (365)
                                 .+.+....|++||++++.+++.++.++.   +.||++++++||+++|++....       ...... ..
T Consensus       141 -----------~~~~~~~~Y~~sKaa~~~~~~~la~e~~---~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~  206 (275)
T PRK08263        141 -----------SAFPMSGIYHASKWALEGMSEALAQEVA---EFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREE  206 (275)
T ss_pred             -----------CCCCCccHHHHHHHHHHHHHHHHHHHhh---hhCcEEEEEecCCccCCccccccccCCCchhhhhHHHH
Confidence                       6777888999999999999999999997   7899999999999999987421       111111 11


Q ss_pred             HHHHHHhcCC-CCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017812          288 FTVLKLLGLL-QSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  330 (365)
Q Consensus       288 ~~~~~~~~~~-~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~  330 (365)
                      .....+.+++ .+|+++|+.++.+ +..+...+.++...+..++
T Consensus       207 ~~~~~~~~~~~~~p~dva~~~~~l-~~~~~~~~~~~~~~~~~~~  249 (275)
T PRK08263        207 LAEQWSERSVDGDPEAAAEALLKL-VDAENPPLRLFLGSGVLDL  249 (275)
T ss_pred             HHHHHHhccCCCCHHHHHHHHHHH-HcCCCCCeEEEeCchHHHH
Confidence            2223355566 8999999999964 3445667788876554444

>PRK06182 short chain dehydrogenase; Validated

Probab=100.00  E-value=4.2e-34  Score=260.70  Aligned_cols=217  Identities=24%  Similarity=0.345  Sum_probs=180.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      ++|+++||||+||||+++|++|+++|++|++++|+.++++++.    .    ..++++.+|++|.++++++++++.+   
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~----~----~~~~~~~~Dv~~~~~~~~~~~~~~~---   70 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLA----S----LGVHPLSLDVTDEASIKAAVDTIIA---   70 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----h----CCCeEEEeeCCCHHHHHHHHHHHHH---
Confidence            5789999999999999999999999999999999987765432    1    2478899999999999999999887   


Q ss_pred             ccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCC
Q 017812          138 DSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNN  215 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~  215 (365)
                         .++++|+||||||+..  +..+.+.++++.++++|+.|++.+++.++|.|++++ .|+||++||.++.         
T Consensus        71 ---~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~g~iv~isS~~~~---------  137 (273)
T PRK06182         71 ---EEGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQR-SGRIINISSMGGK---------  137 (273)
T ss_pred             ---hcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchhhc---------
Confidence               5688999999999863  445778999999999999999999999999998875 6899999998876         


Q ss_pred             ccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh----------HHHH
Q 017812          216 ETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS----------FLSL  285 (365)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~----------~~~~  285 (365)
                                 .+.+....|++||+++++|+++++.|+.   +.||++++++||+++|++.+....          ....
T Consensus       138 -----------~~~~~~~~Y~~sKaa~~~~~~~l~~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~  203 (273)
T PRK06182        138 -----------IYTPLGAWYHATKFALEGFSDALRLEVA---PFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQ  203 (273)
T ss_pred             -----------CCCCCccHhHHHHHHHHHHHHHHHHHhc---ccCCEEEEEecCCcccccchhhhhhhcccccccchHHH
Confidence                       5566677899999999999999999997   789999999999999998532110          0000


Q ss_pred             -----HHHHHHHHhcCCCCHHHHHHHHHHHhc
Q 017812          286 -----MAFTVLKLLGLLQSPEKGINSVLDAAL  312 (365)
Q Consensus       286 -----~~~~~~~~~~~~~~p~e~A~~i~~~~l  312 (365)
                           .......+.+++.+|+++|+.+++++.
T Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~vA~~i~~~~~  235 (273)
T PRK06182        204 AQAVAASMRSTYGSGRLSDPSVIADAISKAVT  235 (273)
T ss_pred             HHHHHHHHHHhhccccCCCHHHHHHHHHHHHh
Confidence                 011222345678899999999997654

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=100.00  E-value=5.3e-34  Score=259.22  Aligned_cols=242  Identities=21%  Similarity=0.221  Sum_probs=184.0

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEec-CchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhc
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGFHVVLVGR-SSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  138 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~~Vil~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~  138 (365)
                      ++++||||++|||+++|++|+++|++|++++| +.++++++.+++.... +.++.++.+|++|++++.+.++++.+...+
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~   80 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARR-PNSAVTCQADLSNSATLFSRCEAIIDACFR   80 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhcc-CCceEEEEccCCCchhhHHHHHHHHHHHHH
Confidence            68999999999999999999999999999875 4667777777775433 346778999999998775544444332211


Q ss_pred             cCCCCCeeEEEecCCcccCC--CCCCH-----------HHHhHhHHHHhHHHHHHHHHHhHhhhcCC-----CCCeEEEE
Q 017812          139 SDMHSSIQLLINNAGILATS--SRLTP-----------EGYDQMMSTNYIGAFFLTKLLLPLLKNSP-----VPSRIVNV  200 (365)
Q Consensus       139 ~~~~~~id~lv~nAG~~~~~--~~~~~-----------~~~~~~~~vN~~~~~~l~~~~l~~~~~~~-----~~g~iV~v  200 (365)
                        .++++|+||||||+..+.  .+.+.           +++++++++|+.+++.++++++|+|+...     ..++||++
T Consensus        81 --~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~  158 (267)
T TIGR02685        81 --AFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNL  158 (267)
T ss_pred             --ccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEe
Confidence              568899999999986332  12222           35889999999999999999999996431     24689999


Q ss_pred             cCCcccccccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccch
Q 017812          201 TSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP  280 (365)
Q Consensus       201 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~  280 (365)
                      +|..+.                    .+.++..+|++||+|+++|+++|++|+.   ++||+|++|+||+++|+...  +
T Consensus       159 ~s~~~~--------------------~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~v~~v~PG~~~~~~~~--~  213 (267)
T TIGR02685       159 CDAMTD--------------------QPLLGFTMYTMAKHALEGLTRSAALELA---PLQIRVNGVAPGLSLLPDAM--P  213 (267)
T ss_pred             hhhhcc--------------------CCCcccchhHHHHHHHHHHHHHHHHHHh---hhCeEEEEEecCCccCcccc--c
Confidence            998877                    6778889999999999999999999998   78999999999999876321  1


Q ss_pred             hHHHHHHHHHHHHhc-CCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017812          281 SFLSLMAFTVLKLLG-LLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  330 (365)
Q Consensus       281 ~~~~~~~~~~~~~~~-~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~  330 (365)
                      ... ........+++ ++.+|+|+|+.+++++... ...+|..+..++|..+
T Consensus       214 ~~~-~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~v~gg~~~  264 (267)
T TIGR02685       214 FEV-QEDYRRKVPLGQREASAEQIADVVIFLVSPKAKYITGTCIKVDGGLSL  264 (267)
T ss_pred             hhH-HHHHHHhCCCCcCCCCHHHHHHHHHHHhCcccCCcccceEEECCceec
Confidence            111 11111122343 6789999999999765433 3568999988887654

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK05866 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.3e-34  Score=262.36  Aligned_cols=219  Identities=24%  Similarity=0.289  Sum_probs=183.9

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHH
Q 017812           54 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  133 (365)
Q Consensus        54 ~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~  133 (365)
                      ..++++|+++||||+||||+++|++|+++|++|++++|+.++++++.+++.+.  +.++.++++|++|.+++.++++++.
T Consensus        35 ~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~--~~~~~~~~~Dl~d~~~v~~~~~~~~  112 (293)
T PRK05866         35 PVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRA--GGDAMAVPCDLSDLDAVDALVADVE  112 (293)
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999999999988888887654  4568899999999999999999998


Q ss_pred             HHHhccCCCCCeeEEEecCCcccCC--CC--CCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccc
Q 017812          134 QWLLDSDMHSSIQLLINNAGILATS--SR--LTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVF  209 (365)
Q Consensus       134 ~~~~~~~~~~~id~lv~nAG~~~~~--~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~  209 (365)
                      +      ..+++|++|||||+....  .+  .+.++++.++++|+.|++.++++++|.|++.+ .|+||++||.++..  
T Consensus       113 ~------~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~--  183 (293)
T PRK05866        113 K------RIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERG-DGHIINVATWGVLS--  183 (293)
T ss_pred             H------HcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CcEEEEECChhhcC--
Confidence            8      568899999999986432  22  13578899999999999999999999998776 68999999976540  


Q ss_pred             cccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHH
Q 017812          210 NAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFT  289 (365)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~  289 (365)
                                       .+.++...|++||+|+++|+++++.|+.   +.||+|++++||+|+|++........      
T Consensus       184 -----------------~~~p~~~~Y~asKaal~~l~~~la~e~~---~~gI~v~~v~pg~v~T~~~~~~~~~~------  237 (293)
T PRK05866        184 -----------------EASPLFSVYNASKAALSAVSRVIETEWG---DRGVHSTTLYYPLVATPMIAPTKAYD------  237 (293)
T ss_pred             -----------------CCCCCcchHHHHHHHHHHHHHHHHHHhc---ccCcEEEEEEcCcccCcccccccccc------
Confidence                             1346678899999999999999999998   78999999999999999975421110      


Q ss_pred             HHHHhcCCCCHHHHHHHHHHHhcC
Q 017812          290 VLKLLGLLQSPEKGINSVLDAALA  313 (365)
Q Consensus       290 ~~~~~~~~~~p~e~A~~i~~~~l~  313 (365)
                         .. ...+||++|+.++.++..
T Consensus       238 ---~~-~~~~pe~vA~~~~~~~~~  257 (293)
T PRK05866        238 ---GL-PALTADEAAEWMVTAART  257 (293)
T ss_pred             ---CC-CCCCHHHHHHHHHHHHhc
Confidence               01 235999999999977654

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=7.6e-34  Score=255.22  Aligned_cols=237  Identities=25%  Similarity=0.323  Sum_probs=190.9

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEe-cCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVG-RSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .|+++||||++|||.++|++|+++|++|++++ |+.++++++.+++...  +.++..++||++|+++++++++++.+   
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~---   76 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAA--GGRACVVAGDVANEADVIAMFDAVQS---   76 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEEeccCCHHHHHHHHHHHHH---
Confidence            36899999999999999999999999998764 6667777777777553  45789999999999999999999887   


Q ss_pred             ccCCCCCeeEEEecCCcccC---CCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCC--CCCeEEEEcCCccccccccc
Q 017812          138 DSDMHSSIQLLINNAGILAT---SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP--VPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~---~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~--~~g~iV~vsS~~~~~~~~~~  212 (365)
                         .++++|++|||||+..+   ..+.+.++++.++++|+.+++.+++.+++.|..++  +.++||++||.++.      
T Consensus        77 ---~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~------  147 (248)
T PRK06947         77 ---AFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASR------  147 (248)
T ss_pred             ---hcCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhc------
Confidence               56789999999998632   34668899999999999999999999999986542  24789999998876      


Q ss_pred             CCCccccccccccCCCCC-hhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcccc--chhHHHHHHHH
Q 017812          213 VNNETITGKFFLRSKCYP-CARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE--VPSFLSLMAFT  289 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~-~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~--~~~~~~~~~~~  289 (365)
                                    .+.+ .+..|++||+++++|++++++++.   +.||+|+.++||+++|++...  .+...  ....
T Consensus       148 --------------~~~~~~~~~Y~~sK~~~~~~~~~la~~~~---~~~i~v~~i~Pg~v~t~~~~~~~~~~~~--~~~~  208 (248)
T PRK06947        148 --------------LGSPNEYVDYAGSKGAVDTLTLGLAKELG---PHGVRVNAVRPGLIETEIHASGGQPGRA--ARLG  208 (248)
T ss_pred             --------------CCCCCCCcccHhhHHHHHHHHHHHHHHhh---hhCcEEEEEeccCcccccccccCCHHHH--HHHh
Confidence                          3333 346799999999999999999997   789999999999999998653  22211  1111


Q ss_pred             HHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCc
Q 017812          290 VLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  328 (365)
Q Consensus       290 ~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~  328 (365)
                      ...|+++..+|+++|+.+++++... ...+|.++..++|+
T Consensus       209 ~~~~~~~~~~~e~va~~~~~l~~~~~~~~~G~~~~~~gg~  248 (248)
T PRK06947        209 AQTPLGRAGEADEVAETIVWLLSDAASYVTGALLDVGGGR  248 (248)
T ss_pred             hcCCCCCCcCHHHHHHHHHHHcCccccCcCCceEeeCCCC
Confidence            2235567789999999999754432 25689999888764

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=8e-34  Score=257.04  Aligned_cols=242  Identities=21%  Similarity=0.256  Sum_probs=198.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      ++++|+++||||+||||++++++|+++|++|++++|++++.++..+++.+.  +.++.++++|++|.++++++++++.+ 
T Consensus         4 ~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~-   80 (262)
T PRK13394          4 NLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKA--GGKAIGVAMDVTNEDAVNAGIDKVAE-   80 (262)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhc--CceEEEEECCCCCHHHHHHHHHHHHH-
Confidence            477999999999999999999999999999999999998888888888654  45788899999999999999999887 


Q ss_pred             HhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhh-hcCCCCCeEEEEcCCccccccccc
Q 017812          136 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLL-KNSPVPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~-~~~~~~g~iV~vsS~~~~~~~~~~  212 (365)
                           ..+++|++|||||...  +..+.+.+++++.+++|+.+++.+++.++|.| ++.+ .++||++||..+.      
T Consensus        81 -----~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~-~~~iv~~ss~~~~------  148 (262)
T PRK13394         81 -----RFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDR-GGVVIYMGSVHSH------  148 (262)
T ss_pred             -----HcCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcC-CcEEEEEcchhhc------
Confidence                 5678999999999863  33456788999999999999999999999999 5544 6899999998776      


Q ss_pred             CCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHH-H-------
Q 017812          213 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFL-S-------  284 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~-~-------  284 (365)
                                    .+.+....|++||++++.++++++.++.   +++|++++++||++.|++.+...... .       
T Consensus       149 --------------~~~~~~~~y~~sk~a~~~~~~~la~~~~---~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~  211 (262)
T PRK13394        149 --------------EASPLKSAYVTAKHGLLGLARVLAKEGA---KHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEE  211 (262)
T ss_pred             --------------CCCCCCcccHHHHHHHHHHHHHHHHHhh---hcCeEEEEEeeCcccchhhhhhhHhhhhccCCChH
Confidence                          5666778999999999999999999987   78999999999999999865432111 0       


Q ss_pred             H-HHH--HHHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017812          285 L-MAF--TVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  329 (365)
Q Consensus       285 ~-~~~--~~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~  329 (365)
                      . ...  ....+.+++.+|+|+|+++++++..+ ...+|++|..++|..
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~dva~a~~~l~~~~~~~~~g~~~~~~~g~~  260 (262)
T PRK13394        212 EVVKKVMLGKTVDGVFTTVEDVAQTVLFLSSFPSAALTGQSFVVSHGWF  260 (262)
T ss_pred             HHHHHHHhcCCCCCCCCCHHHHHHHHHHHcCccccCCcCCEEeeCCcee
Confidence            0 000  01112346789999999999655433 245789998887753

>PRK07832 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.9e-34  Score=259.19  Aligned_cols=224  Identities=28%  Similarity=0.387  Sum_probs=185.4

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhcc
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  139 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~  139 (365)
                      |+++||||++|||+++|++|+++|++|++++|+.+.+++..+++...+ ...+.++++|++|+++++++++++.+     
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~-----   74 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALG-GTVPEHRALDISDYDAVAAFAADIHA-----   74 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CCcceEEEeeCCCHHHHHHHHHHHHH-----
Confidence            479999999999999999999999999999999988888888876553 33456689999999999999999987     


Q ss_pred             CCCCCeeEEEecCCcc--cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcc
Q 017812          140 DMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNET  217 (365)
Q Consensus       140 ~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~  217 (365)
                       ..+++|++|||||..  .+..+.+.++++..+++|+.|++.++++++|.|.+.+..|+||++||..+.           
T Consensus        75 -~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~-----------  142 (272)
T PRK07832         75 -AHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGL-----------  142 (272)
T ss_pred             -hcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEcccccc-----------
Confidence             567899999999975  344577899999999999999999999999999765435899999999876           


Q ss_pred             ccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh-----HHHHHHHHHHH
Q 017812          218 ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS-----FLSLMAFTVLK  292 (365)
Q Consensus       218 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~-----~~~~~~~~~~~  292 (365)
                               .+.+....|++||+++.+++++++.|+.   ..||+|++|+||+++|++.+....     ...........
T Consensus       143 ---------~~~~~~~~Y~~sK~a~~~~~~~l~~e~~---~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  210 (272)
T PRK07832        143 ---------VALPWHAAYSASKFGLRGLSEVLRFDLA---RHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVDR  210 (272)
T ss_pred             ---------CCCCCCcchHHHHHHHHHHHHHHHHHhh---hcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHHh
Confidence                     6677788999999999999999999997   789999999999999998764310     01111111112


Q ss_pred             HhcCCCCHHHHHHHHHHHhcC
Q 017812          293 LLGLLQSPEKGINSVLDAALA  313 (365)
Q Consensus       293 ~~~~~~~p~e~A~~i~~~~l~  313 (365)
                      ..++..+|+++|..+++++..
T Consensus       211 ~~~~~~~~~~vA~~~~~~~~~  231 (272)
T PRK07832        211 FRGHAVTPEKAAEKILAGVEK  231 (272)
T ss_pred             cccCCCCHHHHHHHHHHHHhc
Confidence            234667999999999987743

>PRK12744 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.4e-34  Score=257.20  Aligned_cols=239  Identities=24%  Similarity=0.273  Sum_probs=184.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCc----hhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS----HLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDS  131 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~----~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~  131 (365)
                      ++++|+++||||++|||+++|++|+++|++|++++++.    +..++..+++...  +.++.++++|++|++++++++++
T Consensus         5 ~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~   82 (257)
T PRK12744          5 SLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAA--GAKAVAFQADLTTAAAVEKLFDD   82 (257)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHh--CCcEEEEecCcCCHHHHHHHHHH
Confidence            46789999999999999999999999999977776543    3455555555443  45788999999999999999999


Q ss_pred             HHHHHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEE-cCCccccc
Q 017812          132 LQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNV-TSFTHRNV  208 (365)
Q Consensus       132 ~~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~v-sS~~~~~~  208 (365)
                      +.+      .++++|++|||||+..  +..+.+.+++++++++|+.+++.++++++|+|.+   .|+++++ ||..+.  
T Consensus        83 ~~~------~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~---~~~iv~~~ss~~~~--  151 (257)
T PRK12744         83 AKA------AFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLND---NGKIVTLVTSLLGA--  151 (257)
T ss_pred             HHH------hhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhcc---CCCEEEEecchhcc--
Confidence            987      5678999999999863  3456788999999999999999999999999975   3677776 454432  


Q ss_pred             ccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHH--
Q 017812          209 FNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLM--  286 (365)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~--  286 (365)
                                         +.+....|++||+|++.|+++++.|+.   +.||+|++++||++.|++...........  
T Consensus       152 -------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~  209 (257)
T PRK12744        152 -------------------FTPFYSAYAGSKAPVEHFTRAASKEFG---ARGISVTAVGPGPMDTPFFYPQEGAEAVAYH  209 (257)
T ss_pred             -------------------cCCCcccchhhHHHHHHHHHHHHHHhC---cCceEEEEEecCccccchhccccccchhhcc
Confidence                               345678899999999999999999998   78999999999999999864321111000  


Q ss_pred             -HHHHHHHhc--CCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcc
Q 017812          287 -AFTVLKLLG--LLQSPEKGINSVLDAALAPPETSGVYFFGGKGRT  329 (365)
Q Consensus       287 -~~~~~~~~~--~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~  329 (365)
                       ......++.  ++.+|+|+|+.+.+++......+|+.+..++|..
T Consensus       210 ~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~g~~~~~~gg~~  255 (257)
T PRK12744        210 KTAAALSPFSKTGLTDIEDIVPFIRFLVTDGWWITGQTILINGGYT  255 (257)
T ss_pred             cccccccccccCCCCCHHHHHHHHHHhhcccceeecceEeecCCcc
Confidence             001112332  6789999999999655432244788888787743

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-33  Score=255.10  Aligned_cols=245  Identities=23%  Similarity=0.265  Sum_probs=196.5

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      .++++|+++||||+||||.++|++|+++|++|++++|+.++++...+++...  +.++.++++|++|+++++++++++.+
T Consensus         8 ~~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~--~~~~~~~~~Dl~d~~~i~~~~~~~~~   85 (259)
T PRK08213          8 FDLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEAL--GIDALWIAADVADEADIERLAEETLE   85 (259)
T ss_pred             hCcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            3478999999999999999999999999999999999998888887777654  45778899999999999999999887


Q ss_pred             HHhccCCCCCeeEEEecCCcc--cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHh-hhcCCCCCeEEEEcCCcccccccc
Q 017812          135 WLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPL-LKNSPVPSRIVNVTSFTHRNVFNA  211 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~-~~~~~~~g~iV~vsS~~~~~~~~~  211 (365)
                            ..+++|++|||||..  .+..+.+.+.+++++++|+.+++.+++++.|+ |.+++ .++||++||..+..... 
T Consensus        86 ------~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~-~~~~v~~sS~~~~~~~~-  157 (259)
T PRK08213         86 ------RFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRG-YGRIINVASVAGLGGNP-  157 (259)
T ss_pred             ------HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcC-CeEEEEECChhhccCCC-
Confidence                  457899999999975  33456688999999999999999999999998 66554 68999999987661110 


Q ss_pred             cCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHH
Q 017812          212 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVL  291 (365)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~  291 (365)
                                     ...++...|++||++++.+++++++++.   ++||++++++||+++|++.+...+... ......
T Consensus       158 ---------------~~~~~~~~Y~~sKa~~~~~~~~~a~~~~---~~gi~v~~v~Pg~~~t~~~~~~~~~~~-~~~~~~  218 (259)
T PRK08213        158 ---------------PEVMDTIAYNTSKGAVINFTRALAAEWG---PHGIRVNAIAPGFFPTKMTRGTLERLG-EDLLAH  218 (259)
T ss_pred             ---------------ccccCcchHHHHHHHHHHHHHHHHHHhc---ccCEEEEEEecCcCCCcchhhhhHHHH-HHHHhc
Confidence                           0113457899999999999999999997   789999999999999998765432211 112223


Q ss_pred             HHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCc
Q 017812          292 KLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  328 (365)
Q Consensus       292 ~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~  328 (365)
                      .+..++.+|+|+|..+++++... ...+|..+..++|.
T Consensus       219 ~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~~~~~~  256 (259)
T PRK08213        219 TPLGRLGDDEDLKGAALLLASDASKHITGQILAVDGGV  256 (259)
T ss_pred             CCCCCCcCHHHHHHHHHHHhCccccCccCCEEEECCCe
Confidence            35567789999999988544322 25578888888764

>PRK05875 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1e-33  Score=258.48  Aligned_cols=244  Identities=17%  Similarity=0.222  Sum_probs=201.7

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      +++|+++||||+||||++++++|+++|++|++++|+.++.++..+++.......++.++++|++|++++.++++++.+  
T Consensus         5 ~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~--   82 (276)
T PRK05875          5 FQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATA--   82 (276)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHH--
Confidence            678999999999999999999999999999999999888887777776543345788999999999999999999887  


Q ss_pred             hccCCCCCeeEEEecCCccc---CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          137 LDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                          ..+++|++|||||...   +..+.+.+++++++++|+.+++.+++++++.|.+.+ .++||++||..+.       
T Consensus        83 ----~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~~sS~~~~-------  150 (276)
T PRK05875         83 ----WHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGG-GGSFVGISSIAAS-------  150 (276)
T ss_pred             ----HcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEechhhc-------
Confidence                5688999999999753   345678889999999999999999999999998765 6899999999876       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHH-HHHHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSL-MAFTVLK  292 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~-~~~~~~~  292 (365)
                                   .+.++..+|++||++++.++++++.++.   ..+|++++|+||+++|++.......... .......
T Consensus       151 -------------~~~~~~~~Y~~sK~a~~~~~~~~~~~~~---~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~  214 (276)
T PRK05875        151 -------------NTHRWFGAYGVTKSAVDHLMKLAADELG---PSWVRVNSIRPGLIRTDLVAPITESPELSADYRACT  214 (276)
T ss_pred             -------------CCCCCCcchHHHHHHHHHHHHHHHHHhc---ccCeEEEEEecCccCCccccccccCHHHHHHHHcCC
Confidence                         5667788999999999999999999997   7899999999999999987543221111 1111223


Q ss_pred             HhcCCCCHHHHHHHHHHHhcCCC-CCcccEEeCCCCccc
Q 017812          293 LLGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKGRTV  330 (365)
Q Consensus       293 ~~~~~~~p~e~A~~i~~~~l~~~-~~~G~~~~~~~g~~~  330 (365)
                      +..++.+|+|+|+.+++++.... ..+|+++..++|+.+
T Consensus       215 ~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~~~  253 (276)
T PRK05875        215 PLPRVGEVEDVANLAMFLLSDAASWITGQVINVDGGHML  253 (276)
T ss_pred             CCCCCcCHHHHHHHHHHHcCchhcCcCCCEEEECCCeec
Confidence            45677899999999996543322 346899988888764

>PRK09134 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-33  Score=253.55  Aligned_cols=238  Identities=24%  Similarity=0.260  Sum_probs=193.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEec-CchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGR-SSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      ...+|+++||||++|||++++++|+++|++|+++++ +.+.++++.+++...  +.+++++++|++|.+++.++++++.+
T Consensus         6 ~~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~~~   83 (258)
T PRK09134          6 MAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRAL--GRRAVALQADLADEAEVRALVARASA   83 (258)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            356899999999999999999999999999988776 455666677776554  45788999999999999999999887


Q ss_pred             HHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017812          135 WLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~  212 (365)
                            ..+++|++|||||...  +..+.+.+++++++++|+.|++.+++++.+.|.++. .++||+++|..+.      
T Consensus        84 ------~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~~s~~~~------  150 (258)
T PRK09134         84 ------ALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADA-RGLVVNMIDQRVW------  150 (258)
T ss_pred             ------HcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CceEEEECchhhc------
Confidence                  5678999999999863  345678899999999999999999999999998765 6899999998766      


Q ss_pred             CCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHH
Q 017812          213 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLK  292 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~  292 (365)
                                    .+.+.+..|++||++++++++++++++.   . +|++++++||++.|+.........   ......
T Consensus       151 --------------~~~p~~~~Y~~sK~a~~~~~~~la~~~~---~-~i~v~~i~PG~v~t~~~~~~~~~~---~~~~~~  209 (258)
T PRK09134        151 --------------NLNPDFLSYTLSKAALWTATRTLAQALA---P-RIRVNAIGPGPTLPSGRQSPEDFA---RQHAAT  209 (258)
T ss_pred             --------------CCCCCchHHHHHHHHHHHHHHHHHHHhc---C-CcEEEEeecccccCCcccChHHHH---HHHhcC
Confidence                          5566677899999999999999999986   4 499999999999987532211111   111123


Q ss_pred             HhcCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017812          293 LLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  330 (365)
Q Consensus       293 ~~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~  330 (365)
                      +.++..+|+|+|+++++++. .+..+|+++..++|...
T Consensus       210 ~~~~~~~~~d~a~~~~~~~~-~~~~~g~~~~i~gg~~~  246 (258)
T PRK09134        210 PLGRGSTPEEIAAAVRYLLD-APSVTGQMIAVDGGQHL  246 (258)
T ss_pred             CCCCCcCHHHHHHHHHHHhc-CCCcCCCEEEECCCeec
Confidence            45667899999999997654 45678999998888754

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=100.00  E-value=1.1e-33  Score=254.26  Aligned_cols=240  Identities=24%  Similarity=0.313  Sum_probs=199.1

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      +++|+++||||++|||++++++|+++|++|++++|+.+..+++.+++...  +.++.++++|++|.++++++++++.+  
T Consensus         1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~--   76 (250)
T TIGR03206         1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAK--GGNAQAFACDITDRDSVDTAVAAAEQ--   76 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHH--
Confidence            46899999999999999999999999999999999998888877777654  45688999999999999999999887  


Q ss_pred             hccCCCCCeeEEEecCCcc--cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017812          137 LDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  214 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~  214 (365)
                          ..+++|++|||||..  .+..+.+.+++++.+++|+.+++.+++.++|.|.+.+ .++||++||.++.        
T Consensus        77 ----~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~iss~~~~--------  143 (250)
T TIGR03206        77 ----ALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERG-AGRIVNIASDAAR--------  143 (250)
T ss_pred             ----HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEECchhhc--------
Confidence                567899999999975  3344667889999999999999999999999998765 6899999999887        


Q ss_pred             CccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh-----HHHHHHHH
Q 017812          215 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS-----FLSLMAFT  289 (365)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~-----~~~~~~~~  289 (365)
                                  .+.+....|+.||+|++.+++++++++.   ..+|+++.++||+++|++......     ......+.
T Consensus       144 ------------~~~~~~~~Y~~sK~a~~~~~~~la~~~~---~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~  208 (250)
T TIGR03206       144 ------------VGSSGEAVYAACKGGLVAFSKTMAREHA---RHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFT  208 (250)
T ss_pred             ------------cCCCCCchHHHHHHHHHHHHHHHHHHHh---HhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHH
Confidence                        6667788999999999999999999987   679999999999999998654321     11111222


Q ss_pred             HHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCc
Q 017812          290 VLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  328 (365)
Q Consensus       290 ~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~  328 (365)
                      ...+.+++.+|+|+|+.+++++... +..+|+.+..++|.
T Consensus       209 ~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~  248 (250)
T TIGR03206       209 RAIPLGRLGQPDDLPGAILFFSSDDASFITGQVLSVSGGL  248 (250)
T ss_pred             hcCCccCCcCHHHHHHHHHHHcCcccCCCcCcEEEeCCCc
Confidence            3345667889999999999644322 24578998888763

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=100.00  E-value=1.1e-33  Score=253.57  Aligned_cols=237  Identities=23%  Similarity=0.298  Sum_probs=195.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      ++++++++||||++|||++++++|+++|+.|++.+|+.+++++..+++     +.++.++.+|+++.++++++++++.+ 
T Consensus         3 ~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~-   76 (245)
T PRK12936          3 DLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL-----GERVKIFPANLSDRDEVKALGQKAEA-   76 (245)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-----CCceEEEEccCCCHHHHHHHHHHHHH-
Confidence            567899999999999999999999999999999999988877665544     34678899999999999999999988 


Q ss_pred             HhccCCCCCeeEEEecCCcccC--CCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGILAT--SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~~--~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                           ..+++|++|||||...+  ..+.+.+++++++++|+.+++++++++.+.+.+++ .++||++||..+.       
T Consensus        77 -----~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~-------  143 (245)
T PRK12936         77 -----DLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRR-YGRIINITSVVGV-------  143 (245)
T ss_pred             -----HcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhC-CCEEEEECCHHhC-------
Confidence                 56889999999998643  34667889999999999999999999999887655 6899999998877       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  293 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  293 (365)
                                   .+.+....|+++|+|+..+++.++.++.   ..|+++++++||+++|++......... .......+
T Consensus       144 -------------~~~~~~~~Y~~sk~a~~~~~~~la~~~~---~~~i~v~~i~pg~~~t~~~~~~~~~~~-~~~~~~~~  206 (245)
T PRK12936        144 -------------TGNPGQANYCASKAGMIGFSKSLAQEIA---TRNVTVNCVAPGFIESAMTGKLNDKQK-EAIMGAIP  206 (245)
T ss_pred             -------------cCCCCCcchHHHHHHHHHHHHHHHHHhh---HhCeEEEEEEECcCcCchhcccChHHH-HHHhcCCC
Confidence                         6667788999999999999999999987   789999999999999998765433221 11112235


Q ss_pred             hcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCc
Q 017812          294 LGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  328 (365)
Q Consensus       294 ~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~  328 (365)
                      .+++.+|+++|+.+++++... ...+|+.+..++|.
T Consensus       207 ~~~~~~~~~ia~~~~~l~~~~~~~~~G~~~~~~~g~  242 (245)
T PRK12936        207 MKRMGTGAEVASAVAYLASSEAAYVTGQTIHVNGGM  242 (245)
T ss_pred             CCCCcCHHHHHHHHHHHcCccccCcCCCEEEECCCc
Confidence            567889999999998654222 24479988888764

>PRK05650 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-33  Score=256.11  Aligned_cols=222  Identities=22%  Similarity=0.269  Sum_probs=187.8

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhcc
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  139 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~  139 (365)
                      ++++||||+||||++++++|+++|++|++++|+.++++++.+++...  +.++.++++|++|++++.++++++.+     
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~i~~-----   73 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREA--GGDGFYQRCDVRDYSQLTALAQACEE-----   73 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHH-----
Confidence            47999999999999999999999999999999999988888888765  45788999999999999999999887     


Q ss_pred             CCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcc
Q 017812          140 DMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNET  217 (365)
Q Consensus       140 ~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~  217 (365)
                       .++++|+||||||+..  +..+.+.+++++++++|+.+++.+++.++|.|.+.+ .++||++||.++.           
T Consensus        74 -~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~-----------  140 (270)
T PRK05650         74 -KWGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQK-SGRIVNIASMAGL-----------  140 (270)
T ss_pred             -HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC-CCEEEEECChhhc-----------
Confidence             5678999999999864  355778899999999999999999999999998765 6899999999988           


Q ss_pred             ccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHH-HHHHHHhcC
Q 017812          218 ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMA-FTVLKLLGL  296 (365)
Q Consensus       218 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~-~~~~~~~~~  296 (365)
                               .+.++...|++||+++++|+++++.|+.   +.||++++|+||+++|++............ .......+.
T Consensus       141 ---------~~~~~~~~Y~~sKaa~~~~~~~l~~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  208 (270)
T PRK05650        141 ---------MQGPAMSSYNVAKAGVVALSETLLVELA---DDEIGVHVVCPSFFQTNLLDSFRGPNPAMKAQVGKLLEKS  208 (270)
T ss_pred             ---------CCCCCchHHHHHHHHHHHHHHHHHHHhc---ccCcEEEEEecCccccCcccccccCchhHHHHHHHHhhcC
Confidence                     6778889999999999999999999997   789999999999999998765432111111 111111223


Q ss_pred             CCCHHHHHHHHHHHhcC
Q 017812          297 LQSPEKGINSVLDAALA  313 (365)
Q Consensus       297 ~~~p~e~A~~i~~~~l~  313 (365)
                      ..+|+++|+.++.++..
T Consensus       209 ~~~~~~vA~~i~~~l~~  225 (270)
T PRK05650        209 PITAADIADYIYQQVAK  225 (270)
T ss_pred             CCCHHHHHHHHHHHHhC
Confidence            56999999999976643

>PRK07904 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.5e-34  Score=256.10  Aligned_cols=212  Identities=19%  Similarity=0.192  Sum_probs=179.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCC-CEEEEEecCchh-HHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREG-FHVVLVGRSSHL-LSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G-~~Vil~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      .+++++||||++|||+++|++|+++| ++|++++|++++ ++++.++++..+ +.+++++++|++|.+++.++++++.+ 
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~-   84 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAG-ASSVEVIDFDALDTDSHPKVIDAAFA-   84 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcC-CCceEEEEecCCChHHHHHHHHHHHh-
Confidence            47899999999999999999999995 899999999886 888888887653 34789999999999999999888775 


Q ss_pred             HhccCCCCCeeEEEecCCcccCCC--CCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                           . +++|++|||+|+..+..  ..+.+...+++++|+.+++.+++.++|.|.+++ .++||++||.++.       
T Consensus        85 -----~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~-~~~iv~isS~~g~-------  150 (253)
T PRK07904         85 -----G-GDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQG-FGQIIAMSSVAGE-------  150 (253)
T ss_pred             -----c-CCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcC-CceEEEEechhhc-------
Confidence                 2 68999999999864432  224555667899999999999999999999876 6999999999876       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  293 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  293 (365)
                                   .+.++...|++||+|+.+|+++++.|+.   ..||+|++++||+++|++.......           
T Consensus       151 -------------~~~~~~~~Y~~sKaa~~~~~~~l~~el~---~~~i~v~~v~Pg~v~t~~~~~~~~~-----------  203 (253)
T PRK07904        151 -------------RVRRSNFVYGSTKAGLDGFYLGLGEALR---EYGVRVLVVRPGQVRTRMSAHAKEA-----------  203 (253)
T ss_pred             -------------CCCCCCcchHHHHHHHHHHHHHHHHHHh---hcCCEEEEEeeCceecchhccCCCC-----------
Confidence                         5556677899999999999999999998   7899999999999999987653211           


Q ss_pred             hcCCCCHHHHHHHHHHHhcC
Q 017812          294 LGLLQSPEKGINSVLDAALA  313 (365)
Q Consensus       294 ~~~~~~p~e~A~~i~~~~l~  313 (365)
                       ....+|+++|+.+++.+..
T Consensus       204 -~~~~~~~~~A~~i~~~~~~  222 (253)
T PRK07904        204 -PLTVDKEDVAKLAVTAVAK  222 (253)
T ss_pred             -CCCCCHHHHHHHHHHHHHc
Confidence             1235999999999976644

>PRK06057 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-33  Score=255.35  Aligned_cols=236  Identities=22%  Similarity=0.232  Sum_probs=189.7

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      ++||+++||||++|||.+++++|+++|++|++++|+..++++..+++     +  ..++++|++|+++++++++++.+  
T Consensus         5 ~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~-----~--~~~~~~D~~~~~~~~~~~~~~~~--   75 (255)
T PRK06057          5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEV-----G--GLFVPTDVTDEDAVNALFDTAAE--   75 (255)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc-----C--CcEEEeeCCCHHHHHHHHHHHHH--
Confidence            67999999999999999999999999999999999987766655554     1  25789999999999999999887  


Q ss_pred             hccCCCCCeeEEEecCCcccC----CCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017812          137 LDSDMHSSIQLLINNAGILAT----SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~~----~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~  212 (365)
                          ..+++|++|||||...+    ..+.+.+++++++++|+.|++++++.++|.|++++ .|+||++||..+.      
T Consensus        76 ----~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~~sS~~~~------  144 (255)
T PRK06057         76 ----TYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQG-KGSIINTASFVAV------  144 (255)
T ss_pred             ----HcCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhC-CcEEEEEcchhhc------
Confidence                45789999999998632    23567889999999999999999999999998765 6899999998765      


Q ss_pred             CCCccccccccccCCCC-ChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh--HHHHHHHH
Q 017812          213 VNNETITGKFFLRSKCY-PCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS--FLSLMAFT  289 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~-~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~--~~~~~~~~  289 (365)
                                    .+. ++...|++||+++++++++++.++.   ..||++++|+||+++|++......  ........
T Consensus       145 --------------~g~~~~~~~Y~~sKaal~~~~~~l~~~~~---~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~  207 (255)
T PRK06057        145 --------------MGSATSQISYTASKGGVLAMSRELGVQFA---RQGIRVNALCPGPVNTPLLQELFAKDPERAARRL  207 (255)
T ss_pred             --------------cCCCCCCcchHHHHHHHHHHHHHHHHHHH---hhCcEEEEEeeCCcCCchhhhhccCCHHHHHHHH
Confidence                          333 3567899999999999999999997   789999999999999998654311  11111111


Q ss_pred             HHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017812          290 VLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  329 (365)
Q Consensus       290 ~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~  329 (365)
                      ...|.+++.+|+|+|+.+.+++... ...+|..+..++|..
T Consensus       208 ~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~~g~~  248 (255)
T PRK06057        208 VHVPMGRFAEPEEIAAAVAFLASDDASFITASTFLVDGGIS  248 (255)
T ss_pred             hcCCCCCCcCHHHHHHHHHHHhCccccCccCcEEEECCCee
Confidence            1234567889999999988544332 355788888787643

>PRK05993 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-33  Score=258.62  Aligned_cols=219  Identities=23%  Similarity=0.297  Sum_probs=178.8

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhc
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  138 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~  138 (365)
                      +|+++||||+||||+++|++|+++|++|++++|+.++++++.+        ..+.++.+|++|.++++++++++.+.   
T Consensus         4 ~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~--------~~~~~~~~Dl~d~~~~~~~~~~~~~~---   72 (277)
T PRK05993          4 KRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEA--------EGLEAFQLDYAEPESIAALVAQVLEL---   72 (277)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH--------CCceEEEccCCCHHHHHHHHHHHHHH---
Confidence            6899999999999999999999999999999999877654432        14678999999999999999988662   


Q ss_pred             cCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017812          139 SDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  216 (365)
Q Consensus       139 ~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~  216 (365)
                        ..+++|++|||||+..  +..+.+.++++.++++|+.|++.+++.++|.|.+++ .|+||++||..+.          
T Consensus        73 --~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~-~g~iv~isS~~~~----------  139 (277)
T PRK05993         73 --SGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQG-QGRIVQCSSILGL----------  139 (277)
T ss_pred             --cCCCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcC-CCEEEEECChhhc----------
Confidence              2368999999999863  345678899999999999999999999999998876 6899999999887          


Q ss_pred             cccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHH-------------
Q 017812          217 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFL-------------  283 (365)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~-------------  283 (365)
                                .+.++...|++||+|+++|+++|+.|+.   +.||+|++|+||+++|++..+.....             
T Consensus       140 ----------~~~~~~~~Y~asK~a~~~~~~~l~~el~---~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~~  206 (277)
T PRK05993        140 ----------VPMKYRGAYNASKFAIEGLSLTLRMELQ---GSGIHVSLIEPGPIETRFRANALAAFKRWIDIENSVHRA  206 (277)
T ss_pred             ----------CCCCccchHHHHHHHHHHHHHHHHHHhh---hhCCEEEEEecCCccCchhhHHHHHHhhhhccccchhHH
Confidence                      6778889999999999999999999998   88999999999999999876432110             


Q ss_pred             HHH---HHHH--HHHhcCCCCHHHHHHHHHHHhcCC
Q 017812          284 SLM---AFTV--LKLLGLLQSPEKGINSVLDAALAP  314 (365)
Q Consensus       284 ~~~---~~~~--~~~~~~~~~p~e~A~~i~~~~l~~  314 (365)
                      ...   ....  ..+.....+||++|+.++.++...
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~va~~i~~a~~~~  242 (277)
T PRK05993        207 AYQQQMARLEGGGSKSRFKLGPEAVYAVLLHALTAP  242 (277)
T ss_pred             HHHHHHHHHHhhhhccccCCCHHHHHHHHHHHHcCC
Confidence            000   0000  001122468999999999766543

>PRK07069 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.6e-33  Score=253.42  Aligned_cols=239  Identities=22%  Similarity=0.254  Sum_probs=193.1

Q ss_pred             EEEecCCChHHHHHHHHHHHCCCEEEEEecC-chhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhccC
Q 017812           62 CIVTGATSGLGAAAAYALSREGFHVVLVGRS-SHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  140 (365)
Q Consensus        62 vlITGassGIG~~~a~~la~~G~~Vil~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~~  140 (365)
                      ++||||++|||+++|++|+++|++|++++|+ .+++++..+++........+..+++|++|+++++++++++.+      
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~------   75 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAAD------   75 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHH------
Confidence            8999999999999999999999999999998 777777777776554334566789999999999999999988      


Q ss_pred             CCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCccc
Q 017812          141 MHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETI  218 (365)
Q Consensus       141 ~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~~  218 (365)
                      .++++|++|||||...  +..+.+.+++++++++|+.+++.+++.++|.|++.+ .++||++||.++.            
T Consensus        76 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~~ss~~~~------------  142 (251)
T PRK07069         76 AMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQ-PASIVNISSVAAF------------  142 (251)
T ss_pred             HcCCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CcEEEEecChhhc------------
Confidence            5688999999999863  345678899999999999999999999999998765 6899999999987            


Q ss_pred             cccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh----HHHHHHHHHHHHh
Q 017812          219 TGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS----FLSLMAFTVLKLL  294 (365)
Q Consensus       219 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~----~~~~~~~~~~~~~  294 (365)
                              .+.++...|+++|++++.++++++.|+... ..+|++++|+||+++|++......    ...........+.
T Consensus       143 --------~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~-~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  213 (251)
T PRK07069        143 --------KAEPDYTAYNASKAAVASLTKSIALDCARR-GLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVPL  213 (251)
T ss_pred             --------cCCCCCchhHHHHHHHHHHHHHHHHHhccc-CCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccCCC
Confidence                    667788899999999999999999998721 346999999999999999764321    1111111112345


Q ss_pred             cCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCc
Q 017812          295 GLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  328 (365)
Q Consensus       295 ~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~  328 (365)
                      +++.+|+|+|+.+++++... ...+|+.+..++|.
T Consensus       214 ~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~~~g~  248 (251)
T PRK07069        214 GRLGEPDDVAHAVLYLASDESRFVTGAELVIDGGI  248 (251)
T ss_pred             CCCcCHHHHHHHHHHHcCccccCccCCEEEECCCe
Confidence            67789999999999643221 25678888777763

>PRK06123 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-33  Score=252.22  Aligned_cols=239  Identities=23%  Similarity=0.294  Sum_probs=189.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEe-cCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVG-RSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      +++++||||++|||.++|++|+++|++|+++. |++++.++..+++...  +.++.++++|++|.+++.++++++.+   
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~---   76 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQ--GGEALAVAADVADEADVLRLFEAVDR---   76 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhC--CCcEEEEEeccCCHHHHHHHHHHHHH---
Confidence            57999999999999999999999999998887 4555666666666543  34678899999999999999999988   


Q ss_pred             ccCCCCCeeEEEecCCcccC---CCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCC--CCCeEEEEcCCccccccccc
Q 017812          138 DSDMHSSIQLLINNAGILAT---SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP--VPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~---~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~--~~g~iV~vsS~~~~~~~~~~  212 (365)
                         .++++|++|||||...+   ..+.+.+++++++++|+.+++.++++++|.|.++.  .+|+||++||.++.      
T Consensus        77 ---~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~------  147 (248)
T PRK06123         77 ---ELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAAR------  147 (248)
T ss_pred             ---HhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhc------
Confidence               56889999999998643   34668899999999999999999999999997542  24799999999876      


Q ss_pred             CCCccccccccccCCCCCh-hhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHH
Q 017812          213 VNNETITGKFFLRSKCYPC-ARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVL  291 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~-~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~  291 (365)
                                    .+.++ ...|++||+++++|+++++.++.   ++||++++++||.+.|++................
T Consensus       148 --------------~~~~~~~~~Y~~sKaa~~~~~~~la~~~~---~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~  210 (248)
T PRK06123        148 --------------LGSPGEYIDYAASKGAIDTMTIGLAKEVA---AEGIRVNAVRPGVIYTEIHASGGEPGRVDRVKAG  210 (248)
T ss_pred             --------------CCCCCCccchHHHHHHHHHHHHHHHHHhc---ccCeEEEEEecCcccCchhhccCCHHHHHHHHhc
Confidence                          44444 35799999999999999999997   7899999999999999975432111111112223


Q ss_pred             HHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCc
Q 017812          292 KLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  328 (365)
Q Consensus       292 ~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~  328 (365)
                      .|+++..+|+|+|+++++++... ...+|+.|..++|+
T Consensus       211 ~p~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~gg~  248 (248)
T PRK06123        211 IPMGRGGTAEEVARAILWLLSDEASYTTGTFIDVSGGR  248 (248)
T ss_pred             CCCCCCcCHHHHHHHHHHHhCccccCccCCEEeecCCC
Confidence            36667789999999999644322 24578888877653

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.4e-33  Score=251.47  Aligned_cols=238  Identities=21%  Similarity=0.282  Sum_probs=197.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      +++++++||||++|||.++|++|+++|++|++++|+.+++++..+++...  +.++..+++|+++.++++++++.+.+  
T Consensus         3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~--   78 (253)
T PRK08217          3 LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGAL--GTEVRGYAANVTDEEDVEATFAQIAE--   78 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHH--
Confidence            67899999999999999999999999999999999998888888877655  45788999999999999999999877  


Q ss_pred             hccCCCCCeeEEEecCCcccCC-----------CCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017812          137 LDSDMHSSIQLLINNAGILATS-----------SRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  205 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~~~-----------~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~  205 (365)
                          ..+++|++|||||...+.           .+.+.+.++.++++|+.|++.+++.++|.|.++...++||++||...
T Consensus        79 ----~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~  154 (253)
T PRK08217         79 ----DFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIAR  154 (253)
T ss_pred             ----HcCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccc
Confidence                457899999999975321           45578899999999999999999999999987644578999999753


Q ss_pred             cccccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHH
Q 017812          206 RNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSL  285 (365)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~  285 (365)
                                           .+.++...|++||+|++.++++++.++.   ++||++++++||+++|++.....+... 
T Consensus       155 ---------------------~~~~~~~~Y~~sK~a~~~l~~~la~~~~---~~~i~v~~v~pg~v~t~~~~~~~~~~~-  209 (253)
T PRK08217        155 ---------------------AGNMGQTNYSASKAGVAAMTVTWAKELA---RYGIRVAAIAPGVIETEMTAAMKPEAL-  209 (253)
T ss_pred             ---------------------cCCCCCchhHHHHHHHHHHHHHHHHHHH---HcCcEEEEEeeCCCcCccccccCHHHH-
Confidence                                 3455678899999999999999999997   789999999999999999866543221 


Q ss_pred             HHHHHHHHhcCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCc
Q 017812          286 MAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGR  328 (365)
Q Consensus       286 ~~~~~~~~~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~  328 (365)
                      .......+.+++.+|+|+|+.+.+++ .+...+|+.+..++|.
T Consensus       210 ~~~~~~~~~~~~~~~~~~a~~~~~l~-~~~~~~g~~~~~~gg~  251 (253)
T PRK08217        210 ERLEKMIPVGRLGEPEEIAHTVRFII-ENDYVTGRVLEIDGGL  251 (253)
T ss_pred             HHHHhcCCcCCCcCHHHHHHHHHHHH-cCCCcCCcEEEeCCCc
Confidence            11222335567789999999999765 3445689988888775

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-33  Score=254.58  Aligned_cols=242  Identities=23%  Similarity=0.271  Sum_probs=200.0

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      +++|+++|||||++||+++|++|+++|++|++++|+.+++++..+++...  +.+++.+.+|++|+++++++++++.+  
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~--   77 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKA--GGKAIGVAMDVTDEEAINAGIDYAVE--   77 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHH--
Confidence            56899999999999999999999999999999999999888888887654  45789999999999999999999887  


Q ss_pred             hccCCCCCeeEEEecCCcccC--CCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017812          137 LDSDMHSSIQLLINNAGILAT--SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  214 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~~--~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~  214 (365)
                          ..+++|++|||||....  ..+.+.++++.++++|+.+++.+++.++|.|++++ .++||++||..+.        
T Consensus        78 ----~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~iss~~~~--------  144 (258)
T PRK12429         78 ----TFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQG-GGRIINMASVHGL--------  144 (258)
T ss_pred             ----HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC-CeEEEEEcchhhc--------
Confidence                55789999999997633  44668889999999999999999999999998876 6899999999887        


Q ss_pred             CccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH---------HHH
Q 017812          215 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF---------LSL  285 (365)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~---------~~~  285 (365)
                                  .+.++.+.|+++|++++.+++.++.++.   .++|++++++||++.|++.......         ...
T Consensus       145 ------------~~~~~~~~y~~~k~a~~~~~~~l~~~~~---~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~  209 (258)
T PRK12429        145 ------------VGSAGKAAYVSAKHGLIGLTKVVALEGA---THGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEV  209 (258)
T ss_pred             ------------cCCCCcchhHHHHHHHHHHHHHHHHHhc---ccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHH
Confidence                        6778889999999999999999999987   7899999999999999986532110         000


Q ss_pred             H--HHHHHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017812          286 M--AFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  330 (365)
Q Consensus       286 ~--~~~~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~  330 (365)
                      .  ......+.+++.+++|+|+.+++++... ...+|++|..++|...
T Consensus       210 ~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g~~~  257 (258)
T PRK12429        210 LEDVLLPLVPQKRFTTVEEIADYALFLASFAAKGVTGQAWVVDGGWTA  257 (258)
T ss_pred             HHHHHhccCCccccCCHHHHHHHHHHHcCccccCccCCeEEeCCCEec
Confidence            0  0111123356789999999998654332 2457899988887543

>PRK08703 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-33  Score=252.06  Aligned_cols=227  Identities=20%  Similarity=0.201  Sum_probs=188.1

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCC--hhhHHHHHHHH
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSS--FQSVLKFKDSL  132 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~--~~~v~~~~~~~  132 (365)
                      .++++|+++||||++|||+++|++|+++|++|++++|+++++++..+++.+.. +..+.++.+|+++  .+++.++++++
T Consensus         2 ~~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~i   80 (239)
T PRK08703          2 ATLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAG-HPEPFAIRFDLMSAEEKEFEQFAATI   80 (239)
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcC-CCCcceEEeeecccchHHHHHHHHHH
Confidence            45789999999999999999999999999999999999998888888876543 3467788999986  56788888888


Q ss_pred             HHHHhccCCC-CCeeEEEecCCcc---cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccc
Q 017812          133 QQWLLDSDMH-SSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNV  208 (365)
Q Consensus       133 ~~~~~~~~~~-~~id~lv~nAG~~---~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~  208 (365)
                      .+      .. +++|++|||||..   .+..+.+.+++++++++|+.|++.++++++|.|.+.+ .+++|++||..+.  
T Consensus        81 ~~------~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~ss~~~~--  151 (239)
T PRK08703         81 AE------ATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSP-DASVIFVGESHGE--  151 (239)
T ss_pred             HH------HhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCC-CCEEEEEeccccc--
Confidence            77      33 6799999999975   3446778899999999999999999999999998765 6899999998877  


Q ss_pred             ccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCC-CeEEEEecCCcccCCccccc-hhHHHHH
Q 017812          209 FNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSR-HVSVIAADPGVVKTNIMREV-PSFLSLM  286 (365)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~-gi~v~~v~PG~v~T~~~~~~-~~~~~~~  286 (365)
                                        .+.+++..|++||+|++.|+++++.|+.   .. +|+|++|+||+|+|++.... +....  
T Consensus       152 ------------------~~~~~~~~Y~~sKaa~~~~~~~la~e~~---~~~~i~v~~v~pG~v~t~~~~~~~~~~~~--  208 (239)
T PRK08703        152 ------------------TPKAYWGGFGASKAALNYLCKVAADEWE---RFGNLRANVLVPGPINSPQRIKSHPGEAK--  208 (239)
T ss_pred             ------------------cCCCCccchHHhHHHHHHHHHHHHHHhc---cCCCeEEEEEecCcccCccccccCCCCCc--
Confidence                              6777788999999999999999999997   44 79999999999999986543 22110  


Q ss_pred             HHHHHHHhcCCCCHHHHHHHHHHHhcC-CCCCcccEE
Q 017812          287 AFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYF  322 (365)
Q Consensus       287 ~~~~~~~~~~~~~p~e~A~~i~~~~l~-~~~~~G~~~  322 (365)
                              ....+++|++..+++++.. ++..+|+.+
T Consensus       209 --------~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  237 (239)
T PRK08703        209 --------SERKSYGDVLPAFVWWASAESKGRSGEIV  237 (239)
T ss_pred             --------cccCCHHHHHHHHHHHhCccccCcCCeEe
Confidence                    0235999999999965432 345677765

>PRK06180 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.2e-33  Score=255.48  Aligned_cols=230  Identities=24%  Similarity=0.257  Sum_probs=185.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .+|+++||||+||||++++++|+++|++|++++|+.++++.+.+.    . +.++..+.+|++|.+++.++++.+.+   
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~----~-~~~~~~~~~D~~d~~~~~~~~~~~~~---   74 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEAL----H-PDRALARLLDVTDFDAIDAVVADAEA---   74 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhh----c-CCCeeEEEccCCCHHHHHHHHHHHHH---
Confidence            468999999999999999999999999999999998776554332    2 34688899999999999999999887   


Q ss_pred             ccCCCCCeeEEEecCCcc--cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCC
Q 017812          138 DSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNN  215 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~  215 (365)
                         .++++|++|||||+.  .+..+.+.+++++++++|+.|++.++++++|+|++++ .++||++||.++.         
T Consensus        75 ---~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~iSS~~~~---------  141 (277)
T PRK06180         75 ---TFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARR-RGHIVNITSMGGL---------  141 (277)
T ss_pred             ---HhCCCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC-CCEEEEEeccccc---------
Confidence               567899999999986  3455778899999999999999999999999998876 6899999999887         


Q ss_pred             ccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc--------hhHHHHHH
Q 017812          216 ETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV--------PSFLSLMA  287 (365)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~--------~~~~~~~~  287 (365)
                                 .+.++...|++||++++.++++++.|+.   ..|+++++++||+++|++....        +.......
T Consensus       142 -----------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~  207 (277)
T PRK06180        142 -----------ITMPGIGYYCGSKFALEGISESLAKEVA---PFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFG  207 (277)
T ss_pred             -----------CCCCCcchhHHHHHHHHHHHHHHHHHhh---hhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHH
Confidence                       6778889999999999999999999997   7899999999999999874321        11111110


Q ss_pred             ----HHHHHHhcCCCCHHHHHHHHHHHhcCCCCCcccEEe
Q 017812          288 ----FTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFF  323 (365)
Q Consensus       288 ----~~~~~~~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~  323 (365)
                          .....+..++.+|+++|++++.++.. +.....|+.
T Consensus       208 ~~~~~~~~~~~~~~~~~~dva~~~~~~l~~-~~~~~~~~~  246 (277)
T PRK06180        208 PIRQAREAKSGKQPGDPAKAAQAILAAVES-DEPPLHLLL  246 (277)
T ss_pred             HHHHHHHhhccCCCCCHHHHHHHHHHHHcC-CCCCeeEec
Confidence                11112234567999999999965433 333334443

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=100.00  E-value=1.9e-33  Score=253.21  Aligned_cols=234  Identities=24%  Similarity=0.270  Sum_probs=193.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      ++++|+++||||++|||++++++|+++|++|++++|+.         +...  +.++.++++|++|.++++++++++.+ 
T Consensus         5 ~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~---------~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~-   72 (252)
T PRK08220          5 DFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF---------LTQE--DYPFATFVLDVSDAAAVAQVCQRLLA-   72 (252)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch---------hhhc--CCceEEEEecCCCHHHHHHHHHHHHH-
Confidence            47899999999999999999999999999999999986         1111  45788999999999999999999888 


Q ss_pred             HhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                           ..+++|++|||||...  +..+.+.+++++++++|+.+++.++++++|.|++++ .|+||++||..+.       
T Consensus        73 -----~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~~ss~~~~-------  139 (252)
T PRK08220         73 -----ETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQR-SGAIVTVGSNAAH-------  139 (252)
T ss_pred             -----HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECCchhc-------
Confidence                 5688999999999863  445678899999999999999999999999998765 6899999998876       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHH---H------
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFL---S------  284 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~---~------  284 (365)
                                   .+.++...|++||++++.++++++.|+.   +.||+|++++||+++|++........   .      
T Consensus       140 -------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~  203 (252)
T PRK08220        140 -------------VPRIGMAAYGASKAALTSLAKCVGLELA---PYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGF  203 (252)
T ss_pred             -------------cCCCCCchhHHHHHHHHHHHHHHHHHhh---HhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhH
Confidence                         6677788999999999999999999998   78999999999999999865431110   0      


Q ss_pred             HHHHHHHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017812          285 LMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  330 (365)
Q Consensus       285 ~~~~~~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~  330 (365)
                      ........|++++.+|+|+|+++++++... ...+|+.+..++|..+
T Consensus       204 ~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~i~~~gg~~~  250 (252)
T PRK08220        204 PEQFKLGIPLGKIARPQEIANAVLFLASDLASHITLQDIVVDGGATL  250 (252)
T ss_pred             HHHHhhcCCCcccCCHHHHHHHHHHHhcchhcCccCcEEEECCCeec
Confidence            011122235678899999999999655432 3668999888887543

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=100.00  E-value=2.4e-33  Score=235.40  Aligned_cols=229  Identities=24%  Similarity=0.337  Sum_probs=183.9

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCC-C-EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREG-F-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G-~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      -|.++||||++|||+.++++|.+.- - .++.++|+++++.+..+....  .+.++|.+++|+++.+++.++++++.+..
T Consensus         3 pksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~--~d~rvHii~Ldvt~deS~~~~~~~V~~iV   80 (249)
T KOG1611|consen    3 PKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSK--SDSRVHIIQLDVTCDESIDNFVQEVEKIV   80 (249)
T ss_pred             CccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhc--cCCceEEEEEecccHHHHHHHHHHHHhhc
Confidence            3669999999999999999999764 4 556678888886222222211  15799999999999999999999999855


Q ss_pred             hccCCCCCeeEEEecCCcccCC---CCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCC----------CCCeEEEEcCC
Q 017812          137 LDSDMHSSIQLLINNAGILATS---SRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP----------VPSRIVNVTSF  203 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~~~---~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~----------~~g~iV~vsS~  203 (365)
                      +    ..++|+||||||+..+.   .+.+.+.|-++++||..|++.++|+++|++++..          ..+.|||+||.
T Consensus        81 g----~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~  156 (249)
T KOG1611|consen   81 G----SDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSS  156 (249)
T ss_pred             c----cCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeecc
Confidence            3    46899999999997543   3556788999999999999999999999998754          13479999998


Q ss_pred             cccccccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHH
Q 017812          204 THRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFL  283 (365)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~  283 (365)
                      ++...                 .....++.+|.+||+|+++|+|+++.|+.   +.+|-|..+|||||.|+|....    
T Consensus       157 ~~s~~-----------------~~~~~~~~AYrmSKaAlN~f~ksls~dL~---~~~ilv~sihPGwV~TDMgg~~----  212 (249)
T KOG1611|consen  157 AGSIG-----------------GFRPGGLSAYRMSKAALNMFAKSLSVDLK---DDHILVVSIHPGWVQTDMGGKK----  212 (249)
T ss_pred             ccccC-----------------CCCCcchhhhHhhHHHHHHHHHHhhhhhc---CCcEEEEEecCCeEEcCCCCCC----
Confidence            87611                 13456789999999999999999999998   8999999999999999998742    


Q ss_pred             HHHHHHHHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017812          284 SLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  330 (365)
Q Consensus       284 ~~~~~~~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~  330 (365)
                                  -..+|||.+..++..+..- +..+|.||. .+|.++
T Consensus       213 ------------a~ltveeSts~l~~~i~kL~~~hnG~ffn-~dlt~i  247 (249)
T KOG1611|consen  213 ------------AALTVEESTSKLLASINKLKNEHNGGFFN-RDGTPI  247 (249)
T ss_pred             ------------cccchhhhHHHHHHHHHhcCcccCcceEc-cCCCcC
Confidence                        2248999999999877665 466788776 455555

>PRK06198 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.7e-33  Score=252.53  Aligned_cols=244  Identities=21%  Similarity=0.247  Sum_probs=198.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCE-EEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFH-VVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~-Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      .+++|+++||||++|||++++++|+++|++ |++++|+.++.++..+++.+.  +.++.++.+|+++++++.++++.+.+
T Consensus         3 ~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (260)
T PRK06198          3 RLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEAL--GAKAVFVQADLSDVEDCRRVVAAADE   80 (260)
T ss_pred             CCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            478999999999999999999999999998 999999988877777777543  45788899999999999999999887


Q ss_pred             HHhccCCCCCeeEEEecCCcccC--CCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017812          135 WLLDSDMHSSIQLLINNAGILAT--SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~~--~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~  212 (365)
                            .++++|++|||||....  ..+.+.+.++.++++|+.|++.+++.++|.|.+++..|++|++||..+.      
T Consensus        81 ------~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~------  148 (260)
T PRK06198         81 ------AFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAH------  148 (260)
T ss_pred             ------HhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccc------
Confidence                  55789999999998632  3466889999999999999999999999999876435899999999887      


Q ss_pred             CCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh----H-HHHHH
Q 017812          213 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS----F-LSLMA  287 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~----~-~~~~~  287 (365)
                                    .+.++...|+.+|+++++++++++.|+.   ..+|++++++||++.|++......    . .....
T Consensus       149 --------------~~~~~~~~Y~~sK~a~~~~~~~~a~e~~---~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~  211 (260)
T PRK06198        149 --------------GGQPFLAAYCASKGALATLTRNAAYALL---RNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLE  211 (260)
T ss_pred             --------------cCCCCcchhHHHHHHHHHHHHHHHHHhc---ccCeEEEEEeeccccCcchhhhhhhccCCChHHHH
Confidence                          5667788999999999999999999998   789999999999999997532111    0 01111


Q ss_pred             -HHHHHHhcCCCCHHHHHHHHHHHhcCCC-CCcccEEeCCCCccc
Q 017812          288 -FTVLKLLGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKGRTV  330 (365)
Q Consensus       288 -~~~~~~~~~~~~p~e~A~~i~~~~l~~~-~~~G~~~~~~~g~~~  330 (365)
                       .....+++++.+|+|+|+.+++++.... ..+|+.+..++|..-
T Consensus       212 ~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~G~~~~~~~~~~~  256 (260)
T PRK06198        212 KAAATQPFGRLLDPDEVARAVAFLLSDESGLMTGSVIDFDQSVWG  256 (260)
T ss_pred             HHhccCCccCCcCHHHHHHHHHHHcChhhCCccCceEeECCcccc
Confidence             1112345677899999999996553322 458999988877654

>PRK07024 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-33  Score=254.65  Aligned_cols=210  Identities=22%  Similarity=0.320  Sum_probs=180.4

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhc
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  138 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~  138 (365)
                      +++++||||++|||+++|++|+++|++|++++|+.+++++..+++...  + ++.++++|++|++++.++++++.+    
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~-~~~~~~~Dl~~~~~i~~~~~~~~~----   74 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKA--A-RVSVYAADVRDADALAAAAADFIA----   74 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccC--C-eeEEEEcCCCCHHHHHHHHHHHHH----
Confidence            478999999999999999999999999999999998887776665432  2 789999999999999999999887    


Q ss_pred             cCCCCCeeEEEecCCcccCC---CCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCC
Q 017812          139 SDMHSSIQLLINNAGILATS---SRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNN  215 (365)
Q Consensus       139 ~~~~~~id~lv~nAG~~~~~---~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~  215 (365)
                        .++++|++|||||+....   .+.+.++++.++++|+.|++.+++.++|.|++++ .++||++||.++.         
T Consensus        75 --~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~-~~~iv~isS~~~~---------  142 (257)
T PRK07024         75 --AHGLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAAR-RGTLVGIASVAGV---------  142 (257)
T ss_pred             --hCCCCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcC-CCEEEEEechhhc---------
Confidence              568899999999986432   2267899999999999999999999999998776 6899999999987         


Q ss_pred             ccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhc
Q 017812          216 ETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLG  295 (365)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  295 (365)
                                 .+.+....|++||++++.++++++.|+.   .+||++++++||+++|++.......           ..
T Consensus       143 -----------~~~~~~~~Y~asK~a~~~~~~~l~~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~-----------~~  197 (257)
T PRK07024        143 -----------RGLPGAGAYSASKAAAIKYLESLRVELR---PAGVRVVTIAPGYIRTPMTAHNPYP-----------MP  197 (257)
T ss_pred             -----------CCCCCCcchHHHHHHHHHHHHHHHHHhh---ccCcEEEEEecCCCcCchhhcCCCC-----------CC
Confidence                       6778888999999999999999999997   7899999999999999986532110           01


Q ss_pred             CCCCHHHHHHHHHHHhc
Q 017812          296 LLQSPEKGINSVLDAAL  312 (365)
Q Consensus       296 ~~~~p~e~A~~i~~~~l  312 (365)
                      ...+|+++|+.++.++.
T Consensus       198 ~~~~~~~~a~~~~~~l~  214 (257)
T PRK07024        198 FLMDADRFAARAARAIA  214 (257)
T ss_pred             CccCHHHHHHHHHHHHh
Confidence            23589999999997664

>PRK06914 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.6e-33  Score=253.69  Aligned_cols=240  Identities=25%  Similarity=0.351  Sum_probs=193.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      ++|+++||||+||||+++|++|+++|++|++++|+.+.++++.+++.....+.+++++.+|++|++++++ ++++.+   
T Consensus         2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~---   77 (280)
T PRK06914          2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLK---   77 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHH---
Confidence            5789999999999999999999999999999999998888887777655445678999999999999999 888776   


Q ss_pred             ccCCCCCeeEEEecCCcccC--CCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCC
Q 017812          138 DSDMHSSIQLLINNAGILAT--SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNN  215 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~--~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~  215 (365)
                         ..+++|++|||||...+  ..+.+.+++++++++|+.+++.+++.++|.|++.+ .++||++||..+.         
T Consensus        78 ---~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~vsS~~~~---------  144 (280)
T PRK06914         78 ---EIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQK-SGKIINISSISGR---------  144 (280)
T ss_pred             ---hcCCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEECccccc---------
Confidence               56889999999998643  34668899999999999999999999999998765 6899999998877         


Q ss_pred             ccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh-----------HHH
Q 017812          216 ETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS-----------FLS  284 (365)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~-----------~~~  284 (365)
                                 .+.++...|++||++++.|+++++.++.   +.||++++++||+++|++......           ...
T Consensus       145 -----------~~~~~~~~Y~~sK~~~~~~~~~l~~~~~---~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~  210 (280)
T PRK06914        145 -----------VGFPGLSPYVSSKYALEGFSESLRLELK---PFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKE  210 (280)
T ss_pred             -----------CCCCCCchhHHhHHHHHHHHHHHHHHhh---hhCCEEEEEecCCcccchhhccccccccccccccchHH
Confidence                       6777888999999999999999999987   789999999999999997642110           000


Q ss_pred             HHH---HHHHHHhcCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017812          285 LMA---FTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  330 (365)
Q Consensus       285 ~~~---~~~~~~~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~  330 (365)
                      ...   .....+.+++.+|+|+|++++.++..+. . +.+|...+++.+
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~-~-~~~~~~~~~~~~  257 (280)
T PRK06914        211 YMKKIQKHINSGSDTFGNPIDVANLIVEIAESKR-P-KLRYPIGKGVKL  257 (280)
T ss_pred             HHHHHHHHHhhhhhccCCHHHHHHHHHHHHcCCC-C-CcccccCCchHH
Confidence            000   1111234567899999999996554332 2 345555555444

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.1e-33  Score=250.28  Aligned_cols=226  Identities=24%  Similarity=0.253  Sum_probs=182.6

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      +++|+++||||++|||++++++|+++|++|++++|+....      .     ..++.++.+|++++  +    +++.+  
T Consensus         3 l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~------~-----~~~~~~~~~D~~~~--~----~~~~~--   63 (235)
T PRK06550          3 FMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD------L-----SGNFHFLQLDLSDD--L----EPLFD--   63 (235)
T ss_pred             CCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc------c-----CCcEEEEECChHHH--H----HHHHH--
Confidence            6789999999999999999999999999999999986431      0     23678999999987  3    33333  


Q ss_pred             hccCCCCCeeEEEecCCcc---cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          137 LDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~---~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                          ..+++|++|||||+.   .+..+.+.+++++++++|+.+++.++++++|.|.+++ .|+||++||..+.       
T Consensus        64 ----~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~-------  131 (235)
T PRK06550         64 ----WVPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERK-SGIIINMCSIASF-------  131 (235)
T ss_pred             ----hhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhc-------
Confidence                347899999999975   3445678899999999999999999999999998765 6899999999887       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcccc-chhHHHHHHHHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE-VPSFLSLMAFTVLK  292 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~-~~~~~~~~~~~~~~  292 (365)
                                   .+.++...|+.+|+++++++++++.|+.   +.||++++|+||+++|++... .+............
T Consensus       132 -------------~~~~~~~~Y~~sK~a~~~~~~~la~~~~---~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~  195 (235)
T PRK06550        132 -------------VAGGGGAAYTASKHALAGFTKQLALDYA---KDGIQVFGIAPGAVKTPMTAADFEPGGLADWVARET  195 (235)
T ss_pred             -------------cCCCCCcccHHHHHHHHHHHHHHHHHhh---hcCeEEEEEeeCCccCcccccccCchHHHHHHhccC
Confidence                         6677788999999999999999999997   789999999999999998653 22111111122234


Q ss_pred             HhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017812          293 LLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  329 (365)
Q Consensus       293 ~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~  329 (365)
                      |++++.+|+|+|+.+++++... ...+|+.+..++|..
T Consensus       196 ~~~~~~~~~~~a~~~~~l~s~~~~~~~g~~~~~~gg~~  233 (235)
T PRK06550        196 PIKRWAEPEEVAELTLFLASGKADYMQGTIVPIDGGWT  233 (235)
T ss_pred             CcCCCCCHHHHHHHHHHHcChhhccCCCcEEEECCcee
Confidence            6678889999999999654322 356899998888854

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=4.5e-33  Score=251.32  Aligned_cols=241  Identities=26%  Similarity=0.359  Sum_probs=194.0

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCc-hhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS-HLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .|+++||||++|||.++|++|+++|++|++++|+. +..++..+.+...  +.++.++++|++|++++.++++++.+   
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~---   76 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRAL--GVEVIFFPADVADLSAHEAMLDAAQA---   76 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHH---
Confidence            37899999999999999999999999999999875 4445555555443  35789999999999999999999988   


Q ss_pred             ccCCCCCeeEEEecCCcccC----CCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCC-----CCeEEEEcCCccccc
Q 017812          138 DSDMHSSIQLLINNAGILAT----SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPV-----PSRIVNVTSFTHRNV  208 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~----~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~-----~g~iV~vsS~~~~~~  208 (365)
                         .++++|++|||||...+    ..+.+.+++++.+++|+.+++.+++++.+.|.++..     .++||++||..+.  
T Consensus        77 ---~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~--  151 (256)
T PRK12745         77 ---AWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAI--  151 (256)
T ss_pred             ---hcCCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhc--
Confidence               56889999999998532    346688999999999999999999999999987642     3679999999887  


Q ss_pred             ccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHH
Q 017812          209 FNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAF  288 (365)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~  288 (365)
                                        .+.++...|+.||+++++++++++.|+.   +.||++++++||.+.|++.............
T Consensus       152 ------------------~~~~~~~~Y~~sK~a~~~~~~~l~~~~~---~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~  210 (256)
T PRK12745        152 ------------------MVSPNRGEYCISKAGLSMAAQLFAARLA---EEGIGVYEVRPGLIKTDMTAPVTAKYDALIA  210 (256)
T ss_pred             ------------------cCCCCCcccHHHHHHHHHHHHHHHHHHH---HhCCEEEEEecCCCcCccccccchhHHhhhh
Confidence                              6677788999999999999999999997   7899999999999999987654322211111


Q ss_pred             HHHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017812          289 TVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  330 (365)
Q Consensus       289 ~~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~  330 (365)
                      ....|++++.+|+|+|+.+.+++... +..+|..|..++|...
T Consensus       211 ~~~~~~~~~~~~~d~a~~i~~l~~~~~~~~~G~~~~i~gg~~~  253 (256)
T PRK12745        211 KGLVPMPRWGEPEDVARAVAALASGDLPYSTGQAIHVDGGLSI  253 (256)
T ss_pred             hcCCCcCCCcCHHHHHHHHHHHhCCcccccCCCEEEECCCeec
Confidence            11235567789999999999544222 2357899988887553

>PRK06924 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.3e-33  Score=250.82  Aligned_cols=239  Identities=25%  Similarity=0.303  Sum_probs=187.5

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEecCc-hhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhc
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS-HLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  138 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~  138 (365)
                      |+++||||+||||+++|++|+++|++|++++|++ +.++++.+    .. +.+++++++|++|.++++++++++.+.+..
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~----~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   76 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAE----QY-NSNLTFHSLDLQDVHELETNFNEILSSIQE   76 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHh----cc-CCceEEEEecCCCHHHHHHHHHHHHHhcCc
Confidence            6899999999999999999999999999999987 33333222    11 357889999999999999999988764321


Q ss_pred             cCCCCCeeEEEecCCccc---CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCC
Q 017812          139 SDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNN  215 (365)
Q Consensus       139 ~~~~~~id~lv~nAG~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~  215 (365)
                      .  ....+++|+|||...   +..+.+.+++++.+++|+.+++.+++.++|.|++.+..++||++||..+.         
T Consensus        77 ~--~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~---------  145 (251)
T PRK06924         77 D--NVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAK---------  145 (251)
T ss_pred             c--cCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhc---------
Confidence            0  012238999999853   34577899999999999999999999999999875435799999998877         


Q ss_pred             ccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh-----HHHHHHHHH
Q 017812          216 ETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS-----FLSLMAFTV  290 (365)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~-----~~~~~~~~~  290 (365)
                                 .+.++...|++||+|++.+++.++.|+.. .+.+|+|++|+||+++|++......     .........
T Consensus       146 -----------~~~~~~~~Y~~sKaa~~~~~~~la~e~~~-~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~  213 (251)
T PRK06924        146 -----------NPYFGWSAYCSSKAGLDMFTQTVATEQEE-EEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFIT  213 (251)
T ss_pred             -----------CCCCCcHHHhHHHHHHHHHHHHHHHHhhh-cCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHHHH
Confidence                       77788899999999999999999999752 1468999999999999998653211     111112223


Q ss_pred             HHHhcCCCCHHHHHHHHHHHhcCCCCCcccEEeCCC
Q 017812          291 LKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGK  326 (365)
Q Consensus       291 ~~~~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~  326 (365)
                      ..+.+++.+|+|+|+.+++++...+..+|+++..++
T Consensus       214 ~~~~~~~~~~~dva~~~~~l~~~~~~~~G~~~~v~~  249 (251)
T PRK06924        214 LKEEGKLLSPEYVAKALRNLLETEDFPNGEVIDIDE  249 (251)
T ss_pred             HhhcCCcCCHHHHHHHHHHHHhcccCCCCCEeehhh
Confidence            345678899999999999776555677888886553

>PRK06194 hypothetical protein; Provisional

Probab=100.00  E-value=1.1e-32  Score=253.11  Aligned_cols=227  Identities=24%  Similarity=0.287  Sum_probs=185.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      ++++|++|||||+||||+++|++|+++|++|++++|+.+.+++..+++...  +.++.++.+|++|.++++++++.+.+ 
T Consensus         3 ~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~~~~~~~~~~~-   79 (287)
T PRK06194          3 DFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQ--GAEVLGVRTDVSDAAQVEALADAALE-   79 (287)
T ss_pred             CCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHH-
Confidence            467899999999999999999999999999999999988888888877654  45788999999999999999999887 


Q ss_pred             HhccCCCCCeeEEEecCCcccC--CCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCC-----CeEEEEcCCccccc
Q 017812          136 LLDSDMHSSIQLLINNAGILAT--SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVP-----SRIVNVTSFTHRNV  208 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~~--~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~-----g~iV~vsS~~~~~~  208 (365)
                           .++++|+||||||....  ..+.+.++++.++++|+.|++.++++++|.|.++...     |+||++||.++.  
T Consensus        80 -----~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~--  152 (287)
T PRK06194         80 -----RFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGL--  152 (287)
T ss_pred             -----HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhc--
Confidence                 56889999999998744  4467889999999999999999999999999877532     799999999988  


Q ss_pred             ccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh---HH--
Q 017812          209 FNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS---FL--  283 (365)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~---~~--  283 (365)
                                        .+.++...|++||++++.|+++++.++... ..+|++++++||+++|++......   ..  
T Consensus       153 ------------------~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~-~~~irv~~v~pg~i~t~~~~~~~~~~~~~~~  213 (287)
T PRK06194        153 ------------------LAPPAMGIYNVSKHAVVSLTETLYQDLSLV-TDQVGASVLCPYFVPTGIWQSERNRPADLAN  213 (287)
T ss_pred             ------------------cCCCCCcchHHHHHHHHHHHHHHHHHHhhc-CCCeEEEEEEeCcccCccccccccCchhccc
Confidence                              666778899999999999999999998621 367999999999999998654211   00  


Q ss_pred             ------HHH---HHHHHHHhcCCCCHHHHHHHHHHHh
Q 017812          284 ------SLM---AFTVLKLLGLLQSPEKGINSVLDAA  311 (365)
Q Consensus       284 ------~~~---~~~~~~~~~~~~~p~e~A~~i~~~~  311 (365)
                            ...   ............+++|+|+.++.++
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~s~~dva~~i~~~~  250 (287)
T PRK06194        214 TAPPTRSQLIAQAMSQKAVGSGKVTAEEVAQLVFDAI  250 (287)
T ss_pred             CccccchhhHHHHHHHhhhhccCCCHHHHHHHHHHHH
Confidence                  000   0000001112369999999999755

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=100.00  E-value=7.4e-33  Score=280.20  Aligned_cols=249  Identities=20%  Similarity=0.210  Sum_probs=204.2

Q ss_pred             CCCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHH
Q 017812           53 PITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  132 (365)
Q Consensus        53 ~~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~  132 (365)
                      +...+++|+++||||++|||+++|++|+++|++|++++|+.+.++++.+++....+..++..+++|++|.++++++++++
T Consensus       408 ~~~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i  487 (676)
T TIGR02632       408 KEKTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADV  487 (676)
T ss_pred             CCcCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHH
Confidence            34568899999999999999999999999999999999999888888887766544456888999999999999999999


Q ss_pred             HHHHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc
Q 017812          133 QQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN  210 (365)
Q Consensus       133 ~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~  210 (365)
                      .+      .++++|++|||||+..  +..+.+.++|+..+++|+.+++.+++.++|.|++++..|+||++||..+.    
T Consensus       488 ~~------~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~----  557 (676)
T TIGR02632       488 AL------AYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAV----  557 (676)
T ss_pred             HH------hcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhc----
Confidence            87      6689999999999863  34567889999999999999999999999999876545799999999887    


Q ss_pred             ccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccC--Cccccc---------
Q 017812          211 AQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKT--NIMREV---------  279 (365)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T--~~~~~~---------  279 (365)
                                      .+.++..+|++||+++++++++++.|+.   +.||+||+|+||.|.|  .+....         
T Consensus       558 ----------------~~~~~~~aY~aSKaA~~~l~r~lA~el~---~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~  618 (676)
T TIGR02632       558 ----------------YAGKNASAYSAAKAAEAHLARCLAAEGG---TYGIRVNTVNPDAVLQGSGIWDGEWREERAAAY  618 (676)
T ss_pred             ----------------CCCCCCHHHHHHHHHHHHHHHHHHHHhc---ccCeEEEEEECCceecCcccccccchhhhhhcc
Confidence                            6777889999999999999999999998   7899999999999964  332211         


Q ss_pred             --hhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCccc
Q 017812          280 --PSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTV  330 (365)
Q Consensus       280 --~~~~~~~~~~~~~~~~~~~~p~e~A~~i~~~~l~-~~~~~G~~~~~~~g~~~  330 (365)
                        .............++++..+|+|+|+++++++.. ....+|+++..|+|...
T Consensus       619 ~~~~~~~~~~~~~r~~l~r~v~peDVA~av~~L~s~~~~~~TG~~i~vDGG~~~  672 (676)
T TIGR02632       619 GIPADELEEHYAKRTLLKRHIFPADIAEAVFFLASSKSEKTTGCIITVDGGVPA  672 (676)
T ss_pred             cCChHHHHHHHHhcCCcCCCcCHHHHHHHHHHHhCCcccCCcCcEEEECCCchh
Confidence              0100011122234567888999999999965432 23567999999988654

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=9e-33  Score=247.60  Aligned_cols=238  Identities=19%  Similarity=0.254  Sum_probs=193.6

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEecCch-hHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhc
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH-LLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  138 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~  138 (365)
                      |+++||||++|||+++|++|+++|++|++++|+.. ..++.......  .+.++.++.+|++|.+++.++++++.+    
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~v~~~~~~~~~----   76 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGF--TEDQVRLKELDVTDTEECAEALAEIEE----   76 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhc--cCCeEEEEEcCCCCHHHHHHHHHHHHH----
Confidence            68999999999999999999999999999999854 22222222222  245688999999999999999999987    


Q ss_pred             cCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017812          139 SDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  216 (365)
Q Consensus       139 ~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~  216 (365)
                        ..+++|++|||||...  +..+.+.+++++++++|+.+++++++.++|.|++.+ .++||++||..+.          
T Consensus        77 --~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~iss~~~~----------  143 (245)
T PRK12824         77 --EEGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQG-YGRIINISSVNGL----------  143 (245)
T ss_pred             --HcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhC-CeEEEEECChhhc----------
Confidence              5688999999999863  345678999999999999999999999999998765 6899999999887          


Q ss_pred             cccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhcC
Q 017812          217 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGL  296 (365)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  296 (365)
                                .+.++...|++||+|+++++++++.++.   ++||++++++||+++|++.+...... ........++++
T Consensus       144 ----------~~~~~~~~Y~~sK~a~~~~~~~l~~~~~---~~~i~v~~v~pg~~~t~~~~~~~~~~-~~~~~~~~~~~~  209 (245)
T PRK12824        144 ----------KGQFGQTNYSAAKAGMIGFTKALASEGA---RYGITVNCIAPGYIATPMVEQMGPEV-LQSIVNQIPMKR  209 (245)
T ss_pred             ----------cCCCCChHHHHHHHHHHHHHHHHHHHHH---HhCeEEEEEEEcccCCcchhhcCHHH-HHHHHhcCCCCC
Confidence                      6677788999999999999999999987   78999999999999999876544321 111222235567


Q ss_pred             CCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCccc
Q 017812          297 LQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTV  330 (365)
Q Consensus       297 ~~~p~e~A~~i~~~~l~-~~~~~G~~~~~~~g~~~  330 (365)
                      +.+|+|+|+.+++++.. ....+|+.+..++|..+
T Consensus       210 ~~~~~~va~~~~~l~~~~~~~~~G~~~~~~~g~~~  244 (245)
T PRK12824        210 LGTPEEIAAAVAFLVSEAAGFITGETISINGGLYM  244 (245)
T ss_pred             CCCHHHHHHHHHHHcCccccCccCcEEEECCCeec
Confidence            78999999999854422 12567999998988754

>PRK08251 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.4e-33  Score=248.15  Aligned_cols=212  Identities=20%  Similarity=0.307  Sum_probs=184.8

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhc
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  138 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~  138 (365)
                      +|+++||||++|||+++|++|+++|++|++++|+.++++++.+++.+..++.+++++++|++|++++.++++++.+    
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~----   77 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRD----   77 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHH----
Confidence            6899999999999999999999999999999999999988888887776677899999999999999999999988    


Q ss_pred             cCCCCCeeEEEecCCcccC--CCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017812          139 SDMHSSIQLLINNAGILAT--SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  216 (365)
Q Consensus       139 ~~~~~~id~lv~nAG~~~~--~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~  216 (365)
                        ..+++|++|||||+..+  ..+.+.+.+++++++|+.+++.+++.++|.|++.+ .++||++||..+.          
T Consensus        78 --~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~----------  144 (248)
T PRK08251         78 --ELGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQG-SGHLVLISSVSAV----------  144 (248)
T ss_pred             --HcCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEEeccccc----------
Confidence              56889999999998643  34557788999999999999999999999998765 6899999998876          


Q ss_pred             cccccccccCCCCCh-hhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhc
Q 017812          217 TITGKFFLRSKCYPC-ARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLG  295 (365)
Q Consensus       217 ~~~~~~~~~~~~~~~-~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  295 (365)
                                .+.+. ...|+.||++++.+++.++.++.   ..+|++++|+||+++|++.+.....            .
T Consensus       145 ----------~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~---~~~i~v~~v~pg~v~t~~~~~~~~~------------~  199 (248)
T PRK08251        145 ----------RGLPGVKAAYAASKAGVASLGEGLRAELA---KTPIKVSTIEPGYIRSEMNAKAKST------------P  199 (248)
T ss_pred             ----------cCCCCCcccHHHHHHHHHHHHHHHHHHhc---ccCcEEEEEecCcCcchhhhccccC------------C
Confidence                      44443 67899999999999999999997   7899999999999999987653221            1


Q ss_pred             CCCCHHHHHHHHHHHhc
Q 017812          296 LLQSPEKGINSVLDAAL  312 (365)
Q Consensus       296 ~~~~p~e~A~~i~~~~l  312 (365)
                      .+.+|+++|+.+++.+.
T Consensus       200 ~~~~~~~~a~~i~~~~~  216 (248)
T PRK08251        200 FMVDTETGVKALVKAIE  216 (248)
T ss_pred             ccCCHHHHHHHHHHHHh
Confidence            34689999999997664

>PRK12746 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-32  Score=247.59  Aligned_cols=245  Identities=29%  Similarity=0.358  Sum_probs=194.0

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEE-ecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHH
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLV-GRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  133 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~  133 (365)
                      +++++++++||||+||||+++|++|+++|++|++. .|+.+++++..+++...  +.+++++++|++|++++.++++++.
T Consensus         2 ~~~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~i~~~~~~~~   79 (254)
T PRK12746          2 KNLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESN--GGKAFLIEADLNSIDGVKKLVEQLK   79 (254)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCcEEEEEcCcCCHHHHHHHHHHHH
Confidence            34678999999999999999999999999999775 78887777777766543  3568899999999999999999988


Q ss_pred             HHHhccCCCCCeeEEEecCCcccC--CCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017812          134 QWLLDSDMHSSIQLLINNAGILAT--SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  211 (365)
Q Consensus       134 ~~~~~~~~~~~id~lv~nAG~~~~--~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~  211 (365)
                      +.++.....+++|++|||||...+  ..+.+.+.++.++++|+.+++++++.++|.|.+   .+++|++||..+.     
T Consensus        80 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~~v~~sS~~~~-----  151 (254)
T PRK12746         80 NELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRA---EGRVINISSAEVR-----  151 (254)
T ss_pred             HHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc---CCEEEEECCHHhc-----
Confidence            744221112479999999998643  346688899999999999999999999999865   3799999999887     


Q ss_pred             cCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHH-HHHHHH
Q 017812          212 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLS-LMAFTV  290 (365)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~-~~~~~~  290 (365)
                                     .+.++...|++||+|++.+++++++++.   +.|+++++++||+++|++.+....... ......
T Consensus       152 ---------------~~~~~~~~Y~~sK~a~~~~~~~~~~~~~---~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~  213 (254)
T PRK12746        152 ---------------LGFTGSIAYGLSKGALNTMTLPLAKHLG---ERGITVNTIMPGYTKTDINAKLLDDPEIRNFATN  213 (254)
T ss_pred             ---------------CCCCCCcchHhhHHHHHHHHHHHHHHHh---hcCcEEEEEEECCccCcchhhhccChhHHHHHHh
Confidence                           6677888999999999999999999997   789999999999999998765322111 111112


Q ss_pred             HHHhcCCCCHHHHHHHHHHHhcCCC-CCcccEEeCCCC
Q 017812          291 LKLLGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKG  327 (365)
Q Consensus       291 ~~~~~~~~~p~e~A~~i~~~~l~~~-~~~G~~~~~~~g  327 (365)
                      ..++++..+++|+|+.+.+++.... ..+|..|..++|
T Consensus       214 ~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~i~~~  251 (254)
T PRK12746        214 SSVFGRIGQVEDIADAVAFLASSDSRWVTGQIIDVSGG  251 (254)
T ss_pred             cCCcCCCCCHHHHHHHHHHHcCcccCCcCCCEEEeCCC
Confidence            2345677899999999985443221 246887777665

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=100.00  E-value=1.6e-32  Score=245.51  Aligned_cols=236  Identities=21%  Similarity=0.263  Sum_probs=195.2

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEec-CchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhc
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGFHVVLVGR-SSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  138 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~~Vil~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~  138 (365)
                      |+++||||++|||+++|++|+++|++|++++| +.+..++..+++...  +.++.++.+|++|++++.++++++.+    
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~----   74 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGAL--GFDFRVVEGDVSSFESCKAAVAKVEA----   74 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhh--CCceEEEEecCCCHHHHHHHHHHHHH----
Confidence            68999999999999999999999999999988 666666665555443  45788999999999999999999887    


Q ss_pred             cCCCCCeeEEEecCCcccC--CCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017812          139 SDMHSSIQLLINNAGILAT--SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  216 (365)
Q Consensus       139 ~~~~~~id~lv~nAG~~~~--~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~  216 (365)
                        ..+++|++|||||...+  ..+.+.+++++++++|+.+++.+++.++|.|++.+ .++||++||..+.          
T Consensus        75 --~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~iss~~~~----------  141 (242)
T TIGR01829        75 --ELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERG-WGRIINISSVNGQ----------  141 (242)
T ss_pred             --HcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhc----------
Confidence              56789999999998643  45668899999999999999999999999998765 6899999998877          


Q ss_pred             cccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhcC
Q 017812          217 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGL  296 (365)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  296 (365)
                                .+.++...|+++|++++.+++++++++.   ..||++++++||++.|++.+..++.... ......+.++
T Consensus       142 ----------~~~~~~~~y~~sk~a~~~~~~~la~~~~---~~~i~v~~i~pg~~~t~~~~~~~~~~~~-~~~~~~~~~~  207 (242)
T TIGR01829       142 ----------KGQFGQTNYSAAKAGMIGFTKALAQEGA---TKGVTVNTISPGYIATDMVMAMREDVLN-SIVAQIPVGR  207 (242)
T ss_pred             ----------CCCCCcchhHHHHHHHHHHHHHHHHHhh---hhCeEEEEEeeCCCcCccccccchHHHH-HHHhcCCCCC
Confidence                      6667788999999999999999999987   7899999999999999987654432111 1222235567


Q ss_pred             CCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCc
Q 017812          297 LQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  328 (365)
Q Consensus       297 ~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~  328 (365)
                      +.+|+++|+.+.+++... ...+|+.+..++|.
T Consensus       208 ~~~~~~~a~~~~~l~~~~~~~~~G~~~~~~gg~  240 (242)
T TIGR01829       208 LGRPEEIAAAVAFLASEEAGYITGATLSINGGL  240 (242)
T ss_pred             CcCHHHHHHHHHHHcCchhcCccCCEEEecCCc
Confidence            889999999998644332 24689999888875

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.6e-32  Score=246.22  Aligned_cols=239  Identities=27%  Similarity=0.355  Sum_probs=200.7

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEE-ecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLV-GRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      +++|+++||||++|||.++|++|+++|++|+++ +|+.++.++..+.+...  +.++.++.+|++|++++.++++.+.+ 
T Consensus         3 ~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~-   79 (247)
T PRK05565          3 LMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEE--GGDAIAVKADVSSEEDVENLVEQIVE-   79 (247)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHH-
Confidence            678999999999999999999999999999999 99988887777777653  45789999999999999999998887 


Q ss_pred             HhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                           ..+++|++|||||...  +..+.+.+++++.+++|+.+++.+++.++|.+.+++ .+++|++||..+.       
T Consensus        80 -----~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~~sS~~~~-------  146 (247)
T PRK05565         80 -----KFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRK-SGVIVNISSIWGL-------  146 (247)
T ss_pred             -----HhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECCHhhc-------
Confidence                 4578999999999863  234668899999999999999999999999998775 6899999998877       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  293 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  293 (365)
                                   .+.+....|+.||++++.++++++.++.   ..|+++++++||+++|++.+....... .......+
T Consensus       147 -------------~~~~~~~~y~~sK~a~~~~~~~~~~~~~---~~gi~~~~v~pg~v~t~~~~~~~~~~~-~~~~~~~~  209 (247)
T PRK05565        147 -------------IGASCEVLYSASKGAVNAFTKALAKELA---PSGIRVNAVAPGAIDTEMWSSFSEEDK-EGLAEEIP  209 (247)
T ss_pred             -------------cCCCCccHHHHHHHHHHHHHHHHHHHHH---HcCeEEEEEEECCccCccccccChHHH-HHHHhcCC
Confidence                         5667778999999999999999999997   789999999999999998876553221 11111233


Q ss_pred             hcCCCCHHHHHHHHHHHhcCCC-CCcccEEeCCCCc
Q 017812          294 LGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKGR  328 (365)
Q Consensus       294 ~~~~~~p~e~A~~i~~~~l~~~-~~~G~~~~~~~g~  328 (365)
                      .+++.+|+++|+.+++++.... ..+|+++..++|.
T Consensus       210 ~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~~~~  245 (247)
T PRK05565        210 LGRLGKPEEIAKVVLFLASDDASYITGQIITVDGGW  245 (247)
T ss_pred             CCCCCCHHHHHHHHHHHcCCccCCccCcEEEecCCc
Confidence            4567799999999997665543 5689999888774

>PRK06179 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-32  Score=250.76  Aligned_cols=216  Identities=26%  Similarity=0.334  Sum_probs=180.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      ++++++||||+||||+++|++|+++|++|++++|+.++.+.          ...++++++|++|+++++++++.+.+   
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~----------~~~~~~~~~D~~d~~~~~~~~~~~~~---   69 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP----------IPGVELLELDVTDDASVQAAVDEVIA---   69 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc----------cCCCeeEEeecCCHHHHHHHHHHHHH---
Confidence            46899999999999999999999999999999999765321          23578999999999999999999988   


Q ss_pred             ccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCC
Q 017812          138 DSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNN  215 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~  215 (365)
                         .++++|+||||||+..  +..+.+.+++++++++|+.|++.+++.++|.|++++ .++||++||..+.         
T Consensus        70 ---~~g~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~iv~isS~~~~---------  136 (270)
T PRK06179         70 ---RAGRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQG-SGRIINISSVLGF---------  136 (270)
T ss_pred             ---hCCCCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEECCcccc---------
Confidence               6688999999999863  445678899999999999999999999999998876 7899999999887         


Q ss_pred             ccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH-------HHH---
Q 017812          216 ETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF-------LSL---  285 (365)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~-------~~~---  285 (365)
                                 .+.+....|++||++++.++++++.|+.   ++||++++++||+++|++.......       ...   
T Consensus       137 -----------~~~~~~~~Y~~sK~a~~~~~~~l~~el~---~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~  202 (270)
T PRK06179        137 -----------LPAPYMALYAASKHAVEGYSESLDHEVR---QFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYDRERAV  202 (270)
T ss_pred             -----------CCCCCccHHHHHHHHHHHHHHHHHHHHh---hhCcEEEEEeCCCcccccccccCCCCCcchhhHHHHHH
Confidence                       6777888999999999999999999998   7899999999999999987643210       000   


Q ss_pred             HHHHHHHHhcCCCCHHHHHHHHHHHhcC
Q 017812          286 MAFTVLKLLGLLQSPEKGINSVLDAALA  313 (365)
Q Consensus       286 ~~~~~~~~~~~~~~p~e~A~~i~~~~l~  313 (365)
                      .......+..+..+|+++|+.++.++..
T Consensus       203 ~~~~~~~~~~~~~~~~~va~~~~~~~~~  230 (270)
T PRK06179        203 VSKAVAKAVKKADAPEVVADTVVKAALG  230 (270)
T ss_pred             HHHHHHhccccCCCHHHHHHHHHHHHcC
Confidence            0011112334567999999999965543

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=5.3e-34  Score=236.29  Aligned_cols=184  Identities=25%  Similarity=0.349  Sum_probs=166.0

Q ss_pred             CCCEEEEecCC-ChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           58 KRPVCIVTGAT-SGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        58 ~~k~vlITGas-sGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      ..|.|+||||| ||||.++|++|++.|+.|+.++|+.+...++..+.       .+....+|+++++++..+..++++. 
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~-------gl~~~kLDV~~~~~V~~v~~evr~~-   77 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQF-------GLKPYKLDVSKPEEVVTVSGEVRAN-   77 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhh-------CCeeEEeccCChHHHHHHHHHHhhC-
Confidence            35789999997 89999999999999999999999988776654332       4789999999999999999999873 


Q ss_pred             hccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017812          137 LDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  214 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~  214 (365)
                          .+|++|+|+||||...  |.-+.+.+..+.+|+||++|++++++++...+.+.+  |.||+++|.++.        
T Consensus        78 ----~~Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaK--GtIVnvgSl~~~--------  143 (289)
T KOG1209|consen   78 ----PDGKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAK--GTIVNVGSLAGV--------  143 (289)
T ss_pred             ----CCCceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHcc--ceEEEecceeEE--------
Confidence                6799999999999974  556889999999999999999999999997766654  999999999999        


Q ss_pred             CccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcccc
Q 017812          215 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE  278 (365)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~  278 (365)
                                  .|.|..+.|++||+|+..+++.|+.|++   +.||+|..+-||.|.|++...
T Consensus       144 ------------vpfpf~~iYsAsKAAihay~~tLrlEl~---PFgv~Vin~itGGv~T~Ia~k  192 (289)
T KOG1209|consen  144 ------------VPFPFGSIYSASKAAIHAYARTLRLELK---PFGVRVINAITGGVATDIADK  192 (289)
T ss_pred             ------------eccchhhhhhHHHHHHHHhhhhcEEeee---ccccEEEEecccceecccccC
Confidence                        8999999999999999999999999998   999999999999999988653

>PRK07775 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.3e-32  Score=247.59  Aligned_cols=225  Identities=21%  Similarity=0.253  Sum_probs=184.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      .++|+++||||++|||+++|++|+++|++|++++|+.+.+++..+++...  +.++.++.+|++|++++.++++++.+  
T Consensus         8 ~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~--   83 (274)
T PRK07775          8 PDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRAD--GGEAVAFPLDVTDPDSVKSFVAQAEE--   83 (274)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHH--
Confidence            56789999999999999999999999999999999988877776666554  34788899999999999999999887  


Q ss_pred             hccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017812          137 LDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  214 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~  214 (365)
                          ..+++|++|||||...  +..+.+.+.+++++++|+.|++.++++++|.|.+++ .++||++||..+.        
T Consensus        84 ----~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~-~g~iv~isS~~~~--------  150 (274)
T PRK07775         84 ----ALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERR-RGDLIFVGSDVAL--------  150 (274)
T ss_pred             ----hcCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CceEEEECChHhc--------
Confidence                5578999999999864  344668899999999999999999999999998765 6899999999877        


Q ss_pred             CccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHH--HHHHHHH--
Q 017812          215 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFL--SLMAFTV--  290 (365)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~--~~~~~~~--  290 (365)
                                  .+.++...|++||++++.+++++++++.   .+||++++++||+++|++........  .......  
T Consensus       151 ------------~~~~~~~~Y~~sK~a~~~l~~~~~~~~~---~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~~  215 (274)
T PRK07775        151 ------------RQRPHMGAYGAAKAGLEAMVTNLQMELE---GTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAKW  215 (274)
T ss_pred             ------------CCCCCcchHHHHHHHHHHHHHHHHHHhc---ccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHHh
Confidence                        5666778899999999999999999987   78999999999999999754432211  1111111  


Q ss_pred             -HHHhcCCCCHHHHHHHHHHHhcC
Q 017812          291 -LKLLGLLQSPEKGINSVLDAALA  313 (365)
Q Consensus       291 -~~~~~~~~~p~e~A~~i~~~~l~  313 (365)
                       ....+++.+|+|+|+++++++..
T Consensus       216 ~~~~~~~~~~~~dva~a~~~~~~~  239 (274)
T PRK07775        216 GQARHDYFLRASDLARAITFVAET  239 (274)
T ss_pred             cccccccccCHHHHHHHHHHHhcC
Confidence             11123577999999999965543

>PRK05884 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.2e-33  Score=244.61  Aligned_cols=210  Identities=15%  Similarity=0.162  Sum_probs=170.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhccC
Q 017812           61 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  140 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~~  140 (365)
                      .++||||++|||+++|++|+++|++|++++|+.+++++..+++       .+..+++|++|.++++++++++.+      
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~v~~~~~~~~~------   68 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL-------DVDAIVCDNTDPASLEEARGLFPH------   68 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-------cCcEEecCCCCHHHHHHHHHHHhh------
Confidence            4899999999999999999999999999999988877665554       356789999999999998876642      


Q ss_pred             CCCCeeEEEecCCccc----C----CCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017812          141 MHSSIQLLINNAGILA----T----SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       141 ~~~~id~lv~nAG~~~----~----~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~  212 (365)
                         ++|++|||||...    +    ..+ +.++|++++++|+.++++++++++|.|++   .|+||++||.+.       
T Consensus        69 ---~id~lv~~ag~~~~~~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~~---~g~Iv~isS~~~-------  134 (223)
T PRK05884         69 ---HLDTIVNVPAPSWDAGDPRTYSLAD-TANAWRNALDATVLSAVLTVQSVGDHLRS---GGSIISVVPENP-------  134 (223)
T ss_pred             ---cCcEEEECCCccccCCCCcccchhc-CHHHHHHHHHHHHHHHHHHHHHHHHHhhc---CCeEEEEecCCC-------
Confidence               5999999998531    1    112 46889999999999999999999999964   489999999652       


Q ss_pred             CCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHH
Q 017812          213 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLK  292 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~  292 (365)
                                       +...+|++||+|+.+|+++++.|+.   ++||+||+|+||+++|++.....          ..
T Consensus       135 -----------------~~~~~Y~asKaal~~~~~~la~e~~---~~gI~v~~v~PG~v~t~~~~~~~----------~~  184 (223)
T PRK05884        135 -----------------PAGSAEAAIKAALSNWTAGQAAVFG---TRGITINAVACGRSVQPGYDGLS----------RT  184 (223)
T ss_pred             -----------------CCccccHHHHHHHHHHHHHHHHHhh---hcCeEEEEEecCccCchhhhhcc----------CC
Confidence                             2346899999999999999999998   88999999999999998753211          01


Q ss_pred             HhcCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCccc
Q 017812          293 LLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTV  330 (365)
Q Consensus       293 ~~~~~~~p~e~A~~i~~~~l~-~~~~~G~~~~~~~g~~~  330 (365)
                      |   ..+|+|+|+.+.+++.. +...+|+.+..++|..+
T Consensus       185 p---~~~~~~ia~~~~~l~s~~~~~v~G~~i~vdgg~~~  220 (223)
T PRK05884        185 P---PPVAAEIARLALFLTTPAARHITGQTLHVSHGALA  220 (223)
T ss_pred             C---CCCHHHHHHHHHHHcCchhhccCCcEEEeCCCeec
Confidence            2   23899999999954322 13568999988888765

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=2.4e-34  Score=230.72  Aligned_cols=235  Identities=20%  Similarity=0.263  Sum_probs=204.0

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      .+|-+++||||.||+|++.|.+|+++|+.|++.+--.++.+++.+++     +.++.+...|++++++++..+..++.  
T Consensus         7 ~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakel-----g~~~vf~padvtsekdv~aala~ak~--   79 (260)
T KOG1199|consen    7 TKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKEL-----GGKVVFTPADVTSEKDVRAALAKAKA--   79 (260)
T ss_pred             hcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHh-----CCceEEeccccCcHHHHHHHHHHHHh--
Confidence            57899999999999999999999999999999999999999999998     78999999999999999999999998  


Q ss_pred             hccCCCCCeeEEEecCCcccC--------CCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCC-----CCCeEEEEcCC
Q 017812          137 LDSDMHSSIQLLINNAGILAT--------SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP-----VPSRIVNVTSF  203 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~~--------~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~-----~~g~iV~vsS~  203 (365)
                          ++|++|.+|||||+...        ....+.++++++++||++|+|+..+.-.-.|-++.     ..|.||++.|.
T Consensus        80 ----kfgrld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasv  155 (260)
T KOG1199|consen   80 ----KFGRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASV  155 (260)
T ss_pred             ----hccceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeecee
Confidence                78999999999998632        23457899999999999999999999998887643     46789999999


Q ss_pred             cccccccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHH
Q 017812          204 THRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFL  283 (365)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~  283 (365)
                      +++                    .+..++++|++||.++.+++.-+++.++   ..|||++.|.||.++||+...+|+..
T Consensus       156 aaf--------------------dgq~gqaaysaskgaivgmtlpiardla---~~gir~~tiapglf~tpllsslpekv  212 (260)
T KOG1199|consen  156 AAF--------------------DGQTGQAAYSASKGAIVGMTLPIARDLA---GDGIRFNTIAPGLFDTPLLSSLPEKV  212 (260)
T ss_pred             eee--------------------cCccchhhhhcccCceEeeechhhhhcc---cCceEEEeecccccCChhhhhhhHHH
Confidence            998                    7788999999999999999999999998   89999999999999999999988866


Q ss_pred             HHHHHHHHHHhcCCCCHHHHHHHHHHHhcCCCCCcccEEeCCC
Q 017812          284 SLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGK  326 (365)
Q Consensus       284 ~~~~~~~~~~~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~  326 (365)
                      ..+.......-.|+..|.|.|..+-. ....+.-+|+.+..|+
T Consensus       213 ~~fla~~ipfpsrlg~p~eyahlvqa-iienp~lngevir~dg  254 (260)
T KOG1199|consen  213 KSFLAQLIPFPSRLGHPHEYAHLVQA-IIENPYLNGEVIRFDG  254 (260)
T ss_pred             HHHHHHhCCCchhcCChHHHHHHHHH-HHhCcccCCeEEEecc
Confidence            54433322223478899999987763 5566677788876554

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=4.1e-32  Score=244.44  Aligned_cols=239  Identities=22%  Similarity=0.271  Sum_probs=192.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecC-chhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRS-SHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      ++++++++||||++|||++++++|+++|++|++..|+ .+...+..+.+.+.  +.++..+.+|+++++++.++++++.+
T Consensus         3 ~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (252)
T PRK06077          3 SLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKEN--GGEGIGVLADVSTREGCETLAKATID   80 (252)
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHc--CCeeEEEEeccCCHHHHHHHHHHHHH
Confidence            3678999999999999999999999999999887764 44455555555543  34678899999999999999999988


Q ss_pred             HHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017812          135 WLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~  212 (365)
                            ..+++|++|||||...  +..+.+.+.+++.+++|+.+++.+++++.|.|.+   .++||++||.++.      
T Consensus        81 ------~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~~sS~~~~------  145 (252)
T PRK06077         81 ------RYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMRE---GGAIVNIASVAGI------  145 (252)
T ss_pred             ------HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhc---CcEEEEEcchhcc------
Confidence                  5578999999999853  3345678889999999999999999999999975   3799999999987      


Q ss_pred             CCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHH---HHHHHH
Q 017812          213 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFL---SLMAFT  289 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~---~~~~~~  289 (365)
                                    .+.++...|++||++++.+++++++|+.   + +|+++.+.||+++|++........   ......
T Consensus       146 --------------~~~~~~~~Y~~sK~~~~~~~~~l~~~~~---~-~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~  207 (252)
T PRK06077        146 --------------RPAYGLSIYGAMKAAVINLTKYLALELA---P-KIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAE  207 (252)
T ss_pred             --------------CCCCCchHHHHHHHHHHHHHHHHHHHHh---c-CCEEEEEeeCCccChHHHhhhhcccccHHHHHH
Confidence                          7788889999999999999999999996   4 999999999999999865432211   001111


Q ss_pred             HHHHhcCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017812          290 VLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  330 (365)
Q Consensus       290 ~~~~~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~  330 (365)
                      ...+.+++.+|+|+|+.+++++. +...+|+.|..++|+.+
T Consensus       208 ~~~~~~~~~~~~dva~~~~~~~~-~~~~~g~~~~i~~g~~~  247 (252)
T PRK06077        208 KFTLMGKILDPEEVAEFVAAILK-IESITGQVFVLDSGESL  247 (252)
T ss_pred             hcCcCCCCCCHHHHHHHHHHHhC-ccccCCCeEEecCCeec
Confidence            11234567899999999997554 34567888888888765

>PRK07454 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-32  Score=244.64  Aligned_cols=218  Identities=26%  Similarity=0.350  Sum_probs=184.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      ++|+++||||++|||++++++|+++|++|++++|++++.+++.+++.+.  +.++.++.+|++|++++.++++++.+   
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~---   79 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRST--GVKAAAYSIDLSNPEAIAPGIAELLE---   79 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhC--CCcEEEEEccCCCHHHHHHHHHHHHH---
Confidence            4689999999999999999999999999999999998888887777654  45788999999999999999999887   


Q ss_pred             ccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCC
Q 017812          138 DSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNN  215 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~  215 (365)
                         .++++|++|||||...  +..+.+.+++++++++|+.+++.+++.++|.|.+++ .++||++||..+.         
T Consensus        80 ---~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~---------  146 (241)
T PRK07454         80 ---QFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARG-GGLIINVSSIAAR---------  146 (241)
T ss_pred             ---HcCCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-CcEEEEEccHHhC---------
Confidence               5688999999999864  334668899999999999999999999999998765 6899999999887         


Q ss_pred             ccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhc
Q 017812          216 ETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLG  295 (365)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  295 (365)
                                 .+.++...|+.||++++.++++++.++.   ..||++++|+||+++|++.........       ....
T Consensus       147 -----------~~~~~~~~Y~~sK~~~~~~~~~~a~e~~---~~gi~v~~i~pg~i~t~~~~~~~~~~~-------~~~~  205 (241)
T PRK07454        147 -----------NAFPQWGAYCVSKAALAAFTKCLAEEER---SHGIRVCTITLGAVNTPLWDTETVQAD-------FDRS  205 (241)
T ss_pred             -----------cCCCCccHHHHHHHHHHHHHHHHHHHhh---hhCCEEEEEecCcccCCcccccccccc-------cccc
Confidence                       6677788999999999999999999997   789999999999999998653211000       0112


Q ss_pred             CCCCHHHHHHHHHHHhcCC
Q 017812          296 LLQSPEKGINSVLDAALAP  314 (365)
Q Consensus       296 ~~~~p~e~A~~i~~~~l~~  314 (365)
                      ++.+|+++|+.+++++..+
T Consensus       206 ~~~~~~~va~~~~~l~~~~  224 (241)
T PRK07454        206 AMLSPEQVAQTILHLAQLP  224 (241)
T ss_pred             cCCCHHHHHHHHHHHHcCC
Confidence            4579999999999655433

>PRK09135 pteridine reductase; Provisional

Probab=100.00  E-value=7.5e-32  Score=242.12  Aligned_cols=240  Identities=21%  Similarity=0.246  Sum_probs=193.3

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCc-hhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS-HLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      .++++++||||+||||++++++|+++|++|++++|+. +..++..+.+.... +..+.++.+|++|.+++.++++++.+ 
T Consensus         4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~-   81 (249)
T PRK09135          4 DSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALR-PGSAAALQADLLDPDALPELVAACVA-   81 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhc-CCceEEEEcCCCCHHHHHHHHHHHHH-
Confidence            4678999999999999999999999999999999964 44555555554433 34688999999999999999999887 


Q ss_pred             HhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                           ..+++|++|||||...  +..+.+.++++.++++|+.|++.+++++.|.+.+++  +++++++|..+.       
T Consensus        82 -----~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~--~~~~~~~~~~~~-------  147 (249)
T PRK09135         82 -----AFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQR--GAIVNITDIHAE-------  147 (249)
T ss_pred             -----HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCC--eEEEEEeChhhc-------
Confidence                 5678999999999753  334567789999999999999999999999987754  789988886655       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcccc-chhHHHHHHHHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE-VPSFLSLMAFTVLK  292 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~-~~~~~~~~~~~~~~  292 (365)
                                   .+.++...|+.||++++.++++++.++.    +++++++++||++.|++... ++... ........
T Consensus       148 -------------~~~~~~~~Y~~sK~~~~~~~~~l~~~~~----~~i~~~~v~pg~~~~~~~~~~~~~~~-~~~~~~~~  209 (249)
T PRK09135        148 -------------RPLKGYPVYCAAKAALEMLTRSLALELA----PEVRVNAVAPGAILWPEDGNSFDEEA-RQAILART  209 (249)
T ss_pred             -------------CCCCCchhHHHHHHHHHHHHHHHHHHHC----CCCeEEEEEeccccCccccccCCHHH-HHHHHhcC
Confidence                         6677888999999999999999999985    47999999999999998653 22211 11112222


Q ss_pred             HhcCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017812          293 LLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  330 (365)
Q Consensus       293 ~~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~  330 (365)
                      ++.+..+++|+|+++.+++...+..+|+.|..++|+..
T Consensus       210 ~~~~~~~~~d~a~~~~~~~~~~~~~~g~~~~i~~g~~~  247 (249)
T PRK09135        210 PLKRIGTPEDIAEAVRFLLADASFITGQILAVDGGRSL  247 (249)
T ss_pred             CcCCCcCHHHHHHHHHHHcCccccccCcEEEECCCeec
Confidence            34556799999999986666555668999999988865

>PRK05693 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.7e-32  Score=246.33  Aligned_cols=215  Identities=24%  Similarity=0.308  Sum_probs=175.5

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhcc
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  139 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~  139 (365)
                      |+++||||+||||++++++|+++|++|++++|+.++++++.    .    ..+.++.+|+++.++++++++++.+     
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~----~----~~~~~~~~Dl~~~~~~~~~~~~~~~-----   68 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALA----A----AGFTAVQLDVNDGAALARLAEELEA-----   68 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----H----CCCeEEEeeCCCHHHHHHHHHHHHH-----
Confidence            68999999999999999999999999999999987655432    1    1367889999999999999999887     


Q ss_pred             CCCCCeeEEEecCCcc--cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcc
Q 017812          140 DMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNET  217 (365)
Q Consensus       140 ~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~  217 (365)
                       .++++|++|||||..  .+..+.+.+++++.+++|+.|++.++++++|.|.+.  .|+||++||.++.           
T Consensus        69 -~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~g~iv~isS~~~~-----------  134 (274)
T PRK05693         69 -EHGGLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRS--RGLVVNIGSVSGV-----------  134 (274)
T ss_pred             -hcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc--CCEEEEECCcccc-----------
Confidence             568899999999975  344567889999999999999999999999999764  4899999999887           


Q ss_pred             ccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH-----------HHHH
Q 017812          218 ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF-----------LSLM  286 (365)
Q Consensus       218 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~-----------~~~~  286 (365)
                               .+.+....|++||++++.++++++.|++   +.||+|++++||+|+|++.+.....           ....
T Consensus       135 ---------~~~~~~~~Y~~sK~al~~~~~~l~~e~~---~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  202 (274)
T PRK05693        135 ---------LVTPFAGAYCASKAAVHALSDALRLELA---PFGVQVMEVQPGAIASQFASNASREAEQLLAEQSPWWPLR  202 (274)
T ss_pred             ---------CCCCCccHHHHHHHHHHHHHHHHHHHhh---hhCeEEEEEecCccccccccccccchhhcCCCCCccHHHH
Confidence                     6677788999999999999999999998   7899999999999999987642110           0000


Q ss_pred             H-HHHHH--HhcCCCCHHHHHHHHHHHhcC
Q 017812          287 A-FTVLK--LLGLLQSPEKGINSVLDAALA  313 (365)
Q Consensus       287 ~-~~~~~--~~~~~~~p~e~A~~i~~~~l~  313 (365)
                      . .....  ......+|+++|+.++.++..
T Consensus       203 ~~~~~~~~~~~~~~~~~~~~a~~i~~~~~~  232 (274)
T PRK05693        203 EHIQARARASQDNPTPAAEFARQLLAAVQQ  232 (274)
T ss_pred             HHHHHHHHhccCCCCCHHHHHHHHHHHHhC
Confidence            0 00000  112346899999999976543

>PRK12827 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7e-32  Score=242.32  Aligned_cols=237  Identities=22%  Similarity=0.290  Sum_probs=190.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEec----CchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGR----SSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDS  131 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r----~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~  131 (365)
                      ++++++++||||+||||+++|++|+++|++|++++|    +.+..+++.+++...  +.++.++.+|++|.+++++++++
T Consensus         3 ~~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~   80 (249)
T PRK12827          3 SLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAA--GGKALGLAFDVRDFAATRAALDA   80 (249)
T ss_pred             CcCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHH
Confidence            467899999999999999999999999999999765    344555555555443  45788999999999999999998


Q ss_pred             HHHHHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHh-HhhhcCCCCCeEEEEcCCccccc
Q 017812          132 LQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLL-PLLKNSPVPSRIVNVTSFTHRNV  208 (365)
Q Consensus       132 ~~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l-~~~~~~~~~g~iV~vsS~~~~~~  208 (365)
                      +.+      ..+++|++|||||...  +..+.+.++++..+++|+.+++.+++++. |.+.+++ .+++|++||..+.  
T Consensus        81 ~~~------~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~iv~~sS~~~~--  151 (249)
T PRK12827         81 GVE------EFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARR-GGRIVNIASVAGV--  151 (249)
T ss_pred             HHH------HhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCC-CeEEEEECCchhc--
Confidence            887      4578999999999864  34567889999999999999999999999 6665554 6899999999887  


Q ss_pred             ccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHH
Q 017812          209 FNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAF  288 (365)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~  288 (365)
                                        .+.++...|+.||++++.++++++.++.   +.||++++++||+++|++........   ..
T Consensus       152 ------------------~~~~~~~~y~~sK~a~~~~~~~l~~~~~---~~~i~~~~i~pg~v~t~~~~~~~~~~---~~  207 (249)
T PRK12827        152 ------------------RGNRGQVNYAASKAGLIGLTKTLANELA---PRGITVNAVAPGAINTPMADNAAPTE---HL  207 (249)
T ss_pred             ------------------CCCCCCchhHHHHHHHHHHHHHHHHHhh---hhCcEEEEEEECCcCCCcccccchHH---HH
Confidence                              6667788999999999999999999987   78999999999999999876543221   11


Q ss_pred             HHHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCC
Q 017812          289 TVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKG  327 (365)
Q Consensus       289 ~~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g  327 (365)
                      ....+..+..+++++|+.+++++... ...+|+++..++|
T Consensus       208 ~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~~g  247 (249)
T PRK12827        208 LNPVPVQRLGEPDEVAALVAFLVSDAASYVTGQVIPVDGG  247 (249)
T ss_pred             HhhCCCcCCcCHHHHHHHHHHHcCcccCCccCcEEEeCCC
Confidence            11223445669999999999655322 3557888887765

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=100.00  E-value=5.2e-32  Score=243.45  Aligned_cols=218  Identities=24%  Similarity=0.340  Sum_probs=177.9

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhcc
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  139 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~  139 (365)
                      ++++||||+||||.++|++|+++|++|++++|++++++++.+.+     +.++.++.+|++|.++++++++++.+     
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~i~~~~~~~~~-----   70 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL-----GDNLYIAQLDVRNRAAIEEMLASLPA-----   70 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----ccceEEEEecCCCHHHHHHHHHHHHH-----
Confidence            36999999999999999999999999999999988877665554     34688999999999999999999887     


Q ss_pred             CCCCCeeEEEecCCcc---cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017812          140 DMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  216 (365)
Q Consensus       140 ~~~~~id~lv~nAG~~---~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~  216 (365)
                       .++++|++|||||+.   .+..+.+.+++++++++|+.|++.+++.++|.|.+++ .++||++||.++.          
T Consensus        71 -~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~----------  138 (248)
T PRK10538         71 -EWRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERN-HGHIINIGSTAGS----------  138 (248)
T ss_pred             -HcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECCcccC----------
Confidence             567899999999975   2445678999999999999999999999999998765 6899999998876          


Q ss_pred             cccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcccc--chhHHHHHHHHHHHHh
Q 017812          217 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE--VPSFLSLMAFTVLKLL  294 (365)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~--~~~~~~~~~~~~~~~~  294 (365)
                                .+.++...|++||++++.+++.++.++.   ++||++++|+||++.|++...  .........  .....
T Consensus       139 ----------~~~~~~~~Y~~sK~~~~~~~~~l~~~~~---~~~i~v~~v~pg~i~~~~~~~~~~~~~~~~~~--~~~~~  203 (248)
T PRK10538        139 ----------WPYAGGNVYGATKAFVRQFSLNLRTDLH---GTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAE--KTYQN  203 (248)
T ss_pred             ----------CCCCCCchhHHHHHHHHHHHHHHHHHhc---CCCcEEEEEeCCeecccccchhhccCcHHHHH--hhccc
Confidence                      6677788999999999999999999998   789999999999998554322  111110000  00011


Q ss_pred             cCCCCHHHHHHHHHHHhcCC
Q 017812          295 GLLQSPEKGINSVLDAALAP  314 (365)
Q Consensus       295 ~~~~~p~e~A~~i~~~~l~~  314 (365)
                      ..+.+|+|+|+.+++++..+
T Consensus       204 ~~~~~~~dvA~~~~~l~~~~  223 (248)
T PRK10538        204 TVALTPEDVSEAVWWVATLP  223 (248)
T ss_pred             cCCCCHHHHHHHHHHHhcCC
Confidence            13469999999999765433

>PRK08267 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.3e-32  Score=245.68  Aligned_cols=217  Identities=22%  Similarity=0.259  Sum_probs=181.5

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhcc
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  139 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~  139 (365)
                      |+++|||||+|||++++++|+++|++|++++|+.+.++++.+++.    +.++.++++|++|.+++.++++.+.+.    
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~~~~----   73 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG----AGNAWTGALDVTDRAAWDAALADFAAA----   73 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc----CCceEEEEecCCCHHHHHHHHHHHHHH----
Confidence            689999999999999999999999999999999988877766653    357899999999999999999888762    


Q ss_pred             CCCCCeeEEEecCCcccC--CCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcc
Q 017812          140 DMHSSIQLLINNAGILAT--SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNET  217 (365)
Q Consensus       140 ~~~~~id~lv~nAG~~~~--~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~  217 (365)
                       ..+++|+||||||....  ..+.+.+++++++++|+.+++.+++++.|.|+.++ .++||++||..+.           
T Consensus        74 -~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~-----------  140 (260)
T PRK08267         74 -TGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATP-GARVINTSSASAI-----------  140 (260)
T ss_pred             -cCCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEeCchhhC-----------
Confidence             15789999999998643  45668899999999999999999999999998775 6899999999887           


Q ss_pred             ccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhcCC
Q 017812          218 ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLL  297 (365)
Q Consensus       218 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  297 (365)
                               .+.+....|+.||+++++++++++.++.   +.||++++++||+++|++.+........   ......+..
T Consensus       141 ---------~~~~~~~~Y~~sKaa~~~~~~~l~~~~~---~~~i~v~~i~pg~~~t~~~~~~~~~~~~---~~~~~~~~~  205 (260)
T PRK08267        141 ---------YGQPGLAVYSATKFAVRGLTEALDLEWR---RHGIRVADVMPLFVDTAMLDGTSNEVDA---GSTKRLGVR  205 (260)
T ss_pred             ---------cCCCCchhhHHHHHHHHHHHHHHHHHhc---ccCcEEEEEecCCcCCcccccccchhhh---hhHhhccCC
Confidence                     6677788999999999999999999997   7899999999999999987641111110   011122234


Q ss_pred             CCHHHHHHHHHHHhc
Q 017812          298 QSPEKGINSVLDAAL  312 (365)
Q Consensus       298 ~~p~e~A~~i~~~~l  312 (365)
                      .+|+++|+.++.++.
T Consensus       206 ~~~~~va~~~~~~~~  220 (260)
T PRK08267        206 LTPEDVAEAVWAAVQ  220 (260)
T ss_pred             CCHHHHHHHHHHHHh
Confidence            689999999997653

>PRK06482 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.6e-32  Score=246.61  Aligned_cols=235  Identities=20%  Similarity=0.255  Sum_probs=185.1

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhc
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  138 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~  138 (365)
                      .|++|||||+||||+++|++|+++|++|++++|+.+.++++.++.     +.++.++++|++|.+++.++++++.+    
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~----   72 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARY-----GDRLWVLQLDVTDSAAVRAVVDRAFA----   72 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----cCceEEEEccCCCHHHHHHHHHHHHH----
Confidence            378999999999999999999999999999999987766554433     34688999999999999999998877    


Q ss_pred             cCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017812          139 SDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  216 (365)
Q Consensus       139 ~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~  216 (365)
                        ..+++|+||||||...  +..+.+.+++++.+++|+.+++.++++++|+|++++ .++||++||..+.          
T Consensus        73 --~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~----------  139 (276)
T PRK06482         73 --ALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQG-GGRIVQVSSEGGQ----------  139 (276)
T ss_pred             --HcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcCcccc----------
Confidence              5578999999999863  344667889999999999999999999999998765 6899999998876          


Q ss_pred             cccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh--------HHHHHHH
Q 017812          217 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS--------FLSLMAF  288 (365)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~--------~~~~~~~  288 (365)
                                .+.++.+.|++||++++.|+++++.++.   +.||+++.++||.+.|++.+....        .......
T Consensus       140 ----------~~~~~~~~Y~~sK~a~~~~~~~l~~~~~---~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~  206 (276)
T PRK06482        140 ----------IAYPGFSLYHATKWGIEGFVEAVAQEVA---PFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDL  206 (276)
T ss_pred             ----------cCCCCCchhHHHHHHHHHHHHHHHHHhh---ccCcEEEEEeCCccccCCcccccccCCCccccchhhHHH
Confidence                      5667788999999999999999999997   789999999999999988643211        0000001


Q ss_pred             HHH---HHhcCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017812          289 TVL---KLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  330 (365)
Q Consensus       289 ~~~---~~~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~  330 (365)
                      ...   .+.....+|++++++++.++..+ . .+..|....++..
T Consensus       207 ~~~~~~~~~~~~~d~~~~~~a~~~~~~~~-~-~~~~~~~g~~~~~  249 (276)
T PRK06482        207 RRALADGSFAIPGDPQKMVQAMIASADQT-P-APRRLTLGSDAYA  249 (276)
T ss_pred             HHHHhhccCCCCCCHHHHHHHHHHHHcCC-C-CCeEEecChHHHH
Confidence            111   11112368999999999765433 2 2344555555544

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=2.6e-32  Score=240.22  Aligned_cols=227  Identities=22%  Similarity=0.195  Sum_probs=197.8

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhcc
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  139 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~  139 (365)
                      +.++|||||+|||+++|+++.++|++|.++.|+.+++.++.+++.-.....++.+..+|+.|.+++...++++++     
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~-----  108 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRD-----  108 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhh-----
Confidence            689999999999999999999999999999999999999999997765555588999999999999999999987     


Q ss_pred             CCCCCeeEEEecCCcc--cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcc
Q 017812          140 DMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNET  217 (365)
Q Consensus       140 ~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~  217 (365)
                       ..+++|.+|||||..  +-+.+.+++.++..++||++|+++.+++.+|.|++....|+|+.+||.++.           
T Consensus       109 -~~~~~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~-----------  176 (331)
T KOG1210|consen  109 -LEGPIDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAM-----------  176 (331)
T ss_pred             -ccCCcceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhh-----------
Confidence             679999999999986  446788999999999999999999999999999998766899999999998           


Q ss_pred             ccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhcCC
Q 017812          218 ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLL  297 (365)
Q Consensus       218 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  297 (365)
                               .+..++++|++||+|+.+++.++++|+.   +.||+|....|+.+.||.+.+.....+....... .....
T Consensus       177 ---------~~i~GysaYs~sK~alrgLa~~l~qE~i---~~~v~Vt~~~P~~~~tpGfE~En~tkP~~t~ii~-g~ss~  243 (331)
T KOG1210|consen  177 ---------LGIYGYSAYSPSKFALRGLAEALRQELI---KYGVHVTLYYPPDTLTPGFERENKTKPEETKIIE-GGSSV  243 (331)
T ss_pred             ---------cCcccccccccHHHHHHHHHHHHHHHHh---hcceEEEEEcCCCCCCCccccccccCchheeeec-CCCCC
Confidence                     8999999999999999999999999998   7899999999999999987654332222211111 11234


Q ss_pred             CCHHHHHHHHHHHhcCCCC
Q 017812          298 QSPEKGINSVLDAALAPPE  316 (365)
Q Consensus       298 ~~p~e~A~~i~~~~l~~~~  316 (365)
                      .++||+|.+++.-+...+.
T Consensus       244 ~~~e~~a~~~~~~~~rg~f  262 (331)
T KOG1210|consen  244 IKCEEMAKAIVKGMKRGNF  262 (331)
T ss_pred             cCHHHHHHHHHhHHhhcCe
Confidence            6999999999987777663

>PRK07060 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.8e-32  Score=241.98  Aligned_cols=234  Identities=24%  Similarity=0.269  Sum_probs=188.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      ++++++++||||++|||+++++.|+++|++|++++|+.+++++..++.       ...++.+|+++.+++.++++.    
T Consensus         6 ~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~v~~~~~~----   74 (245)
T PRK07060          6 DFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET-------GCEPLRLDVGDDAAIRAALAA----   74 (245)
T ss_pred             ccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-------CCeEEEecCCCHHHHHHHHHH----
Confidence            478999999999999999999999999999999999987766554432       246788999999988877654    


Q ss_pred             HhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                            .+++|++|||||...  +..+.+.+++++.+++|+.+++.+++++++.+.+.+..++||++||..+.       
T Consensus        75 ------~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~-------  141 (245)
T PRK07060         75 ------AGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAAL-------  141 (245)
T ss_pred             ------hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHc-------
Confidence                  367999999999863  23456788999999999999999999999998765434899999999887       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc-hhHHHHHHHHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV-PSFLSLMAFTVLK  292 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~-~~~~~~~~~~~~~  292 (365)
                                   .+.++...|+.||++++.++++++.++.   +.||++++++||++.|++.+.. .............
T Consensus       142 -------------~~~~~~~~y~~sK~a~~~~~~~~a~~~~---~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~  205 (245)
T PRK07060        142 -------------VGLPDHLAYCASKAALDAITRVLCVELG---PHGIRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAAI  205 (245)
T ss_pred             -------------CCCCCCcHhHHHHHHHHHHHHHHHHHHh---hhCeEEEEEeeCCCCCchhhhhccCHHHHHHHHhcC
Confidence                         6677788999999999999999999997   7899999999999999986532 1111111122223


Q ss_pred             HhcCCCCHHHHHHHHHHHhcCCC-CCcccEEeCCCCcc
Q 017812          293 LLGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKGRT  329 (365)
Q Consensus       293 ~~~~~~~p~e~A~~i~~~~l~~~-~~~G~~~~~~~g~~  329 (365)
                      +.+++.+|+|+|+.++.++.... ..+|+++..++|..
T Consensus       206 ~~~~~~~~~d~a~~~~~l~~~~~~~~~G~~~~~~~g~~  243 (245)
T PRK07060        206 PLGRFAEVDDVAAPILFLLSDAASMVSGVSLPVDGGYT  243 (245)
T ss_pred             CCCCCCCHHHHHHHHHHHcCcccCCccCcEEeECCCcc
Confidence            55678899999999996554332 45799999888754

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.1e-31  Score=241.20  Aligned_cols=229  Identities=24%  Similarity=0.318  Sum_probs=189.9

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCC--ChhhHHHHHHHH
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS--SFQSVLKFKDSL  132 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls--~~~~v~~~~~~~  132 (365)
                      ..+++|+++||||++|||.+++++|+++|++|++++|+.+++++..+++.+.. ..++.++.+|++  +.++++++++.+
T Consensus         8 ~~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~   86 (247)
T PRK08945          8 DLLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAG-GPQPAIIPLDLLTATPQNYQQLADTI   86 (247)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcC-CCCceEEEecccCCCHHHHHHHHHHH
Confidence            34689999999999999999999999999999999999988888888876653 346677788886  788999999988


Q ss_pred             HHHHhccCCCCCeeEEEecCCccc---CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccc
Q 017812          133 QQWLLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVF  209 (365)
Q Consensus       133 ~~~~~~~~~~~~id~lv~nAG~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~  209 (365)
                      .+      ..+++|+||||||...   +..+.+.+++++.+++|+.|++.++++++|.|.+++ .++||++||..+.   
T Consensus        87 ~~------~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~-~~~iv~~ss~~~~---  156 (247)
T PRK08945         87 EE------QFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSP-AASLVFTSSSVGR---  156 (247)
T ss_pred             HH------HhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC-CCEEEEEccHhhc---
Confidence            87      5578999999999853   345678899999999999999999999999998876 6899999999877   


Q ss_pred             cccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHH
Q 017812          210 NAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFT  289 (365)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~  289 (365)
                                       .+.+++..|++||++++.++++++.++.   ..||++++++||+++|++........      
T Consensus       157 -----------------~~~~~~~~Y~~sK~a~~~~~~~~~~~~~---~~~i~~~~v~pg~v~t~~~~~~~~~~------  210 (247)
T PRK08945        157 -----------------QGRANWGAYAVSKFATEGMMQVLADEYQ---GTNLRVNCINPGGTRTAMRASAFPGE------  210 (247)
T ss_pred             -----------------CCCCCCcccHHHHHHHHHHHHHHHHHhc---ccCEEEEEEecCCccCcchhhhcCcc------
Confidence                             6667788999999999999999999997   78999999999999999754321110      


Q ss_pred             HHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEe
Q 017812          290 VLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFF  323 (365)
Q Consensus       290 ~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~  323 (365)
                         ...++.+|+|+++.+++++... ...+|+.+.
T Consensus       211 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  242 (247)
T PRK08945        211 ---DPQKLKTPEDIMPLYLYLMGDDSRRKNGQSFD  242 (247)
T ss_pred             ---cccCCCCHHHHHHHHHHHhCccccccCCeEEe
Confidence               0124679999999999754221 145777764

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=9e-32  Score=240.45  Aligned_cols=218  Identities=23%  Similarity=0.371  Sum_probs=186.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      ++++++++||||++|||++++++|+++|++|++++|+.++.++..+++...  +.++.++.+|+++++++.++++++.+ 
T Consensus         4 ~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~-   80 (239)
T PRK07666          4 SLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAY--GVKVVIATADVSDYEEVTAAIEQLKN-   80 (239)
T ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh--CCeEEEEECCCCCHHHHHHHHHHHHH-
Confidence            467899999999999999999999999999999999998888887777543  45789999999999999999999887 


Q ss_pred             HhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                           ..+++|++|||||...  +..+.+.+++++.+++|+.+++.+++.+.|.|.+++ .+++|++||..+.       
T Consensus        81 -----~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~ss~~~~-------  147 (239)
T PRK07666         81 -----ELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQ-SGDIINISSTAGQ-------  147 (239)
T ss_pred             -----HcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CcEEEEEcchhhc-------
Confidence                 5688999999999853  344678899999999999999999999999998775 6899999999887       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  293 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  293 (365)
                                   .+.++...|+.||+++..++++++.|+.   +.||++++|+||++.|++........        ..
T Consensus       148 -------------~~~~~~~~Y~~sK~a~~~~~~~~a~e~~---~~gi~v~~v~pg~v~t~~~~~~~~~~--------~~  203 (239)
T PRK07666        148 -------------KGAAVTSAYSASKFGVLGLTESLMQEVR---KHNIRVTALTPSTVATDMAVDLGLTD--------GN  203 (239)
T ss_pred             -------------cCCCCCcchHHHHHHHHHHHHHHHHHhh---ccCcEEEEEecCcccCcchhhccccc--------cC
Confidence                         6677788999999999999999999997   78999999999999999865321100        01


Q ss_pred             hcCCCCHHHHHHHHHHHhcC
Q 017812          294 LGLLQSPEKGINSVLDAALA  313 (365)
Q Consensus       294 ~~~~~~p~e~A~~i~~~~l~  313 (365)
                      ...+.+++++|+.++.++..
T Consensus       204 ~~~~~~~~~~a~~~~~~l~~  223 (239)
T PRK07666        204 PDKVMQPEDLAEFIVAQLKL  223 (239)
T ss_pred             CCCCCCHHHHHHHHHHHHhC
Confidence            12457999999999976644

>PRK09072 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.6e-32  Score=245.35  Aligned_cols=217  Identities=30%  Similarity=0.377  Sum_probs=183.7

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      +++++++||||++|||++++++|+++|++|++++|+++.++++.+++ ..  +.++.++++|++|.+++.++++.+.+  
T Consensus         3 ~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~--~~~~~~~~~D~~d~~~~~~~~~~~~~--   77 (263)
T PRK09072          3 LKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARL-PY--PGRHRWVVADLTSEAGREAVLARARE--   77 (263)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-hc--CCceEEEEccCCCHHHHHHHHHHHHh--
Confidence            57899999999999999999999999999999999998888887777 22  45788999999999999999988864  


Q ss_pred             hccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017812          137 LDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  214 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~  214 (365)
                           .+++|++|||||...  +..+.+.+++++++++|+.|++.+++.++|+|.+++ .++||++||..+.        
T Consensus        78 -----~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~--------  143 (263)
T PRK09072         78 -----MGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQP-SAMVVNVGSTFGS--------  143 (263)
T ss_pred             -----cCCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CCEEEEecChhhC--------
Confidence                 378999999999863  345678899999999999999999999999998875 6899999998877        


Q ss_pred             CccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHh
Q 017812          215 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLL  294 (365)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  294 (365)
                                  .+.++...|+.||+++.+++++++.++.   +.||+|++++||+++|++........      .....
T Consensus       144 ------------~~~~~~~~Y~~sK~a~~~~~~~l~~~~~---~~~i~v~~v~Pg~~~t~~~~~~~~~~------~~~~~  202 (263)
T PRK09072        144 ------------IGYPGYASYCASKFALRGFSEALRRELA---DTGVRVLYLAPRATRTAMNSEAVQAL------NRALG  202 (263)
T ss_pred             ------------cCCCCccHHHHHHHHHHHHHHHHHHHhc---ccCcEEEEEecCcccccchhhhcccc------ccccc
Confidence                        6677788999999999999999999998   78999999999999999864321100      00011


Q ss_pred             cCCCCHHHHHHHHHHHhcC
Q 017812          295 GLLQSPEKGINSVLDAALA  313 (365)
Q Consensus       295 ~~~~~p~e~A~~i~~~~l~  313 (365)
                      .++.+|+++|+.+++++..
T Consensus       203 ~~~~~~~~va~~i~~~~~~  221 (263)
T PRK09072        203 NAMDDPEDVAAAVLQAIEK  221 (263)
T ss_pred             CCCCCHHHHHHHHHHHHhC
Confidence            2567999999999976643

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=100.00  E-value=1e-31  Score=240.98  Aligned_cols=238  Identities=23%  Similarity=0.271  Sum_probs=189.7

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEE-EecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhc
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGFHVVL-VGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  138 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~~Vil-~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~  138 (365)
                      |+++||||+||||++++++|+++|++|++ ..|+.++.++...++...  +.++..+++|++|+++++++++++.+    
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~i~~~~~~~~~----   75 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQA--GGKAFVLQADISDENQVVAMFTAIDQ----   75 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhC--CCeEEEEEccCCCHHHHHHHHHHHHH----
Confidence            58999999999999999999999999987 467877777777777654  45688899999999999999999887    


Q ss_pred             cCCCCCeeEEEecCCccc---CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCC--CCCeEEEEcCCcccccccccC
Q 017812          139 SDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP--VPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       139 ~~~~~~id~lv~nAG~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~--~~g~iV~vsS~~~~~~~~~~~  213 (365)
                        .++++|++|||||...   +..+.+.++++..+++|+.+++.+++.+++.|.++.  ..|+||++||..+.       
T Consensus        76 --~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~-------  146 (247)
T PRK09730         76 --HDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASR-------  146 (247)
T ss_pred             --hCCCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhc-------
Confidence              6789999999999753   334668889999999999999999999999997652  25789999998876       


Q ss_pred             CCccccccccccCCCCCh-hhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHH
Q 017812          214 NNETITGKFFLRSKCYPC-ARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLK  292 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~-~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~  292 (365)
                                   .+.++ ...|+++|++++.++++++.++.   ++||++++++||++.|++.................
T Consensus       147 -------------~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~---~~~i~v~~i~pg~~~~~~~~~~~~~~~~~~~~~~~  210 (247)
T PRK09730        147 -------------LGAPGEYVDYAASKGAIDTLTTGLSLEVA---AQGIRVNCVRPGFIYTEMHASGGEPGRVDRVKSNI  210 (247)
T ss_pred             -------------cCCCCcccchHhHHHHHHHHHHHHHHHHH---HhCeEEEEEEeCCCcCcccccCCCHHHHHHHHhcC
Confidence                         44443 35799999999999999999997   78999999999999999764322111111112223


Q ss_pred             HhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCc
Q 017812          293 LLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  328 (365)
Q Consensus       293 ~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~  328 (365)
                      |+++..+|+|+|+.+++++... ...+|.++..++|+
T Consensus       211 ~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~g~~  247 (247)
T PRK09730        211 PMQRGGQPEEVAQAIVWLLSDKASYVTGSFIDLAGGK  247 (247)
T ss_pred             CCCCCcCHHHHHHHHHhhcChhhcCccCcEEecCCCC
Confidence            4556679999999999655332 24678888877653

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=100.00  E-value=1.4e-31  Score=240.57  Aligned_cols=243  Identities=26%  Similarity=0.316  Sum_probs=198.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      ++++|+++||||+++||++++++|+++|++|++++|+.++..+..+++...  +.++.++.+|++|.+++.++++++.+ 
T Consensus         3 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~-   79 (251)
T PRK12826          3 DLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAA--GGKARARQVDVRDRAALKAAVAAGVE-   79 (251)
T ss_pred             CCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHH-
Confidence            367899999999999999999999999999999999988888777777654  34688999999999999999999887 


Q ss_pred             HhccCCCCCeeEEEecCCcccC--CCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGILAT--SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~~--~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                           ..+++|++|||||....  ....+.+++++.+++|+.+++.+++.++|.|.+++ .++||++||..+.       
T Consensus        80 -----~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~ss~~~~-------  146 (251)
T PRK12826         80 -----DFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAG-GGRIVLTSSVAGP-------  146 (251)
T ss_pred             -----HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEEechHhh-------
Confidence                 45789999999998643  34668899999999999999999999999998765 6899999998764       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  293 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  293 (365)
                                  ..+.++...|+.||++++.++++++.++.   ..|++++.++||.+.|+..+...............|
T Consensus       147 ------------~~~~~~~~~y~~sK~a~~~~~~~~~~~~~---~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~  211 (251)
T PRK12826        147 ------------RVGYPGLAHYAASKAGLVGFTRALALELA---ARNITVNSVHPGGVDTPMAGNLGDAQWAEAIAAAIP  211 (251)
T ss_pred             ------------ccCCCCccHHHHHHHHHHHHHHHHHHHHH---HcCeEEEEEeeCCCCcchhhhcCchHHHHHHHhcCC
Confidence                        13456677899999999999999999987   789999999999999998765433211111222235


Q ss_pred             hcCCCCHHHHHHHHHHHhcCCC-CCcccEEeCCCCcc
Q 017812          294 LGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKGRT  329 (365)
Q Consensus       294 ~~~~~~p~e~A~~i~~~~l~~~-~~~G~~~~~~~g~~  329 (365)
                      .+++.+++|+|+.++.++.... ..+|+.+..++|.-
T Consensus       212 ~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~~  248 (251)
T PRK12826        212 LGRLGEPEDIAAAVLFLASDEARYITGQTLPVDGGAT  248 (251)
T ss_pred             CCCCcCHHHHHHHHHHHhCccccCcCCcEEEECCCcc
Confidence            5577899999999996553322 35788888777654

>PRK07074 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-31  Score=240.91  Aligned_cols=240  Identities=21%  Similarity=0.229  Sum_probs=194.1

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhc
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  138 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~  138 (365)
                      +|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.    +.++.++++|++|.+++.+.++++.+    
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~----   73 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALG----DARFVPVACDLTDAASLAAALANAAA----   73 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc----CCceEEEEecCCCHHHHHHHHHHHHH----
Confidence            5799999999999999999999999999999999988877776662    34688999999999999999998877    


Q ss_pred             cCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017812          139 SDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  216 (365)
Q Consensus       139 ~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~  216 (365)
                        .++++|++|||||...  +..+.++++++..+++|+.+++.+.+++++.+.+++ .++||++||..+.          
T Consensus        74 --~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~----------  140 (257)
T PRK07074         74 --ERGPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRS-RGAVVNIGSVNGM----------  140 (257)
T ss_pred             --HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEEcchhhc----------
Confidence              5678999999999864  334668899999999999999999999999998765 6899999997654          


Q ss_pred             cccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHH-H-HHHHHHHHh
Q 017812          217 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLS-L-MAFTVLKLL  294 (365)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~-~-~~~~~~~~~  294 (365)
                                . ..+...|+.||++++.++++++.++.   ++||+|++++||+++|++......... . .......+.
T Consensus       141 ----------~-~~~~~~y~~sK~a~~~~~~~~a~~~~---~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~  206 (257)
T PRK07074        141 ----------A-ALGHPAYSAAKAGLIHYTKLLAVEYG---RFGIRANAVAPGTVKTQAWEARVAANPQVFEELKKWYPL  206 (257)
T ss_pred             ----------C-CCCCcccHHHHHHHHHHHHHHHHHHh---HhCeEEEEEEeCcCCcchhhcccccChHHHHHHHhcCCC
Confidence                      1 12345799999999999999999997   789999999999999998643211111 1 111112345


Q ss_pred             cCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCccccCC
Q 017812          295 GLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTVNSS  333 (365)
Q Consensus       295 ~~~~~p~e~A~~i~~~~l~-~~~~~G~~~~~~~g~~~~~~  333 (365)
                      +++.+|+|+|+++++++.. ....+|+++..++|......
T Consensus       207 ~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g~~~~~~  246 (257)
T PRK07074        207 QDFATPDDVANAVLFLASPAARAITGVCLPVDGGLTAGNR  246 (257)
T ss_pred             CCCCCHHHHHHHHHHHcCchhcCcCCcEEEeCCCcCcCCh
Confidence            6788999999999965532 23567999988888776433

>PRK07577 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-31  Score=238.91  Aligned_cols=227  Identities=21%  Similarity=0.218  Sum_probs=182.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .+|+++||||++|||++++++|+++|++|++++|+.+.      .    .   ...++.+|++|.++++++++++.+   
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~------~----~---~~~~~~~D~~~~~~~~~~~~~~~~---   65 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID------D----F---PGELFACDLADIEQTAATLAQINE---   65 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc------c----c---CceEEEeeCCCHHHHHHHHHHHHH---
Confidence            57899999999999999999999999999999998753      0    0   124789999999999999998876   


Q ss_pred             ccCCCCCeeEEEecCCcccC--CCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCC
Q 017812          138 DSDMHSSIQLLINNAGILAT--SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNN  215 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~--~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~  215 (365)
                         . .++|++|||||...+  ..+.+.+++++++++|+.+++.+++.++|.|++.+ .++||++||.+.+         
T Consensus        66 ---~-~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~---------  131 (234)
T PRK07577         66 ---I-HPVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLRE-QGRIVNICSRAIF---------  131 (234)
T ss_pred             ---h-CCCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcccccc---------
Confidence               3 368999999998643  34568899999999999999999999999998775 6899999998633         


Q ss_pred             ccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHH--HHHHHHHH
Q 017812          216 ETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSL--MAFTVLKL  293 (365)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~--~~~~~~~~  293 (365)
                                  +.+....|++||+++++++++++.|+.   +.||++++|+||+++|++.+........  .......+
T Consensus       132 ------------~~~~~~~Y~~sK~a~~~~~~~~a~e~~---~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~  196 (234)
T PRK07577        132 ------------GALDRTSYSAAKSALVGCTRTWALELA---EYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASIP  196 (234)
T ss_pred             ------------CCCCchHHHHHHHHHHHHHHHHHHHHH---hhCcEEEEEecCcccCcccccccccchhHHHHHhhcCC
Confidence                        345667899999999999999999998   7899999999999999987643221111  11111234


Q ss_pred             hcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017812          294 LGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  329 (365)
Q Consensus       294 ~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~  329 (365)
                      +++..+|+|+|..+++++..+ ...+|+.+..++|..
T Consensus       197 ~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~g~~~  233 (234)
T PRK07577        197 MRRLGTPEEVAAAIAFLLSDDAGFITGQVLGVDGGGS  233 (234)
T ss_pred             CCCCcCHHHHHHHHHHHhCcccCCccceEEEecCCcc
Confidence            556679999999999765432 356899998887653

>PRK07806 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-31  Score=240.72  Aligned_cols=241  Identities=22%  Similarity=0.188  Sum_probs=186.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCch-hHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH-LLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      ++++|+++||||+||||++++++|+++|++|++++|+.+ ..+.+.+++...  +.++..+++|++|++++.++++++.+
T Consensus         3 ~~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (248)
T PRK07806          3 DLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAA--GGRASAVGADLTDEESVAALMDTARE   80 (248)
T ss_pred             CCCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999864 456666666553  45688999999999999999998877


Q ss_pred             HHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017812          135 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  214 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~  214 (365)
                            .++++|++|||||..... .   ..++..+++|+.|++.+++.+.|.|.+   .++||++||..+....     
T Consensus        81 ------~~~~~d~vi~~ag~~~~~-~---~~~~~~~~vn~~~~~~l~~~~~~~~~~---~~~iv~isS~~~~~~~-----  142 (248)
T PRK07806         81 ------EFGGLDALVLNASGGMES-G---MDEDYAMRLNRDAQRNLARAALPLMPA---GSRVVFVTSHQAHFIP-----  142 (248)
T ss_pred             ------hCCCCcEEEECCCCCCCC-C---CCcceeeEeeeHHHHHHHHHHHhhccC---CceEEEEeCchhhcCc-----
Confidence                  567899999999974221 1   235678999999999999999999854   3799999996543100     


Q ss_pred             CccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH-HHHHHHHHHHH
Q 017812          215 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF-LSLMAFTVLKL  293 (365)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~  293 (365)
                      .          ..+.+.+..|++||++++.++++++.|++   ..||+|++|+||++.|++....... ..........+
T Consensus       143 ~----------~~~~~~~~~Y~~sK~a~e~~~~~l~~~~~---~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~  209 (248)
T PRK07806        143 T----------VKTMPEYEPVARSKRAGEDALRALRPELA---EKGIGFVVVSGDMIEGTVTATLLNRLNPGAIEARREA  209 (248)
T ss_pred             c----------ccCCccccHHHHHHHHHHHHHHHHHHHhh---ccCeEEEEeCCccccCchhhhhhccCCHHHHHHHHhh
Confidence            0          02234467899999999999999999998   7899999999999999875432110 00000112346


Q ss_pred             hcCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017812          294 LGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  330 (365)
Q Consensus       294 ~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~  330 (365)
                      .+++.+|+|+|+++++++. ++..+|+.|..++++..
T Consensus       210 ~~~~~~~~dva~~~~~l~~-~~~~~g~~~~i~~~~~~  245 (248)
T PRK07806        210 AGKLYTVSEFAAEVARAVT-APVPSGHIEYVGGADYF  245 (248)
T ss_pred             hcccCCHHHHHHHHHHHhh-ccccCccEEEecCccce
Confidence            6788999999999997554 45678998888877653

>PRK07102 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-31  Score=238.89  Aligned_cols=209  Identities=22%  Similarity=0.276  Sum_probs=179.3

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhcc
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  139 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~  139 (365)
                      |+++||||++|||++++++|+++|++|++++|++++.++..+++... ++.++.++++|++|+++++++++++.+     
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~-----   75 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRAR-GAVAVSTHELDILDTASHAAFLDSLPA-----   75 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHh-cCCeEEEEecCCCChHHHHHHHHHHhh-----
Confidence            68999999999999999999999999999999998888877777654 345889999999999999999887754     


Q ss_pred             CCCCCeeEEEecCCcccC--CCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcc
Q 017812          140 DMHSSIQLLINNAGILAT--SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNET  217 (365)
Q Consensus       140 ~~~~~id~lv~nAG~~~~--~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~  217 (365)
                          .+|++|||||....  ..+.+.+++++.+++|+.+++.+++++.|.|.+++ .++||++||..+.           
T Consensus        76 ----~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~-----------  139 (243)
T PRK07102         76 ----LPDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARG-SGTIVGISSVAGD-----------  139 (243)
T ss_pred             ----cCCEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CCEEEEEeccccc-----------
Confidence                37999999997643  34667889999999999999999999999998766 6899999998876           


Q ss_pred             ccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhcCC
Q 017812          218 ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLL  297 (365)
Q Consensus       218 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  297 (365)
                               .+.++...|++||+++++++++++.|+.   +.||++++|+||+++|++......           +...+
T Consensus       140 ---------~~~~~~~~Y~~sK~a~~~~~~~l~~el~---~~gi~v~~v~pg~v~t~~~~~~~~-----------~~~~~  196 (243)
T PRK07102        140 ---------RGRASNYVYGSAKAALTAFLSGLRNRLF---KSGVHVLTVKPGFVRTPMTAGLKL-----------PGPLT  196 (243)
T ss_pred             ---------CCCCCCcccHHHHHHHHHHHHHHHHHhh---ccCcEEEEEecCcccChhhhccCC-----------Ccccc
Confidence                     5667778899999999999999999998   789999999999999998654321           11235


Q ss_pred             CCHHHHHHHHHHHhcC
Q 017812          298 QSPEKGINSVLDAALA  313 (365)
Q Consensus       298 ~~p~e~A~~i~~~~l~  313 (365)
                      .+|+++|+.+++.+..
T Consensus       197 ~~~~~~a~~i~~~~~~  212 (243)
T PRK07102        197 AQPEEVAKDIFRAIEK  212 (243)
T ss_pred             CCHHHHHHHHHHHHhC
Confidence            6999999999976653

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=100.00  E-value=7.5e-31  Score=235.25  Aligned_cols=240  Identities=29%  Similarity=0.365  Sum_probs=195.0

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCch-hHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH-LLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      +++|+++|||||||||++++++|+++|++|+++.|+.+ ..+...+++...  +.++..+.+|+++.+++.++++++.+ 
T Consensus         3 ~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~-   79 (248)
T PRK05557          3 LEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGAL--GGKALAVQGDVSDAESVERAVDEAKA-   79 (248)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHH-
Confidence            57899999999999999999999999999988888765 355555655443  45788999999999999999998887 


Q ss_pred             HhccCCCCCeeEEEecCCcccC--CCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGILAT--SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~~--~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                           .++++|++|||||....  ..+.+.+++++.+++|+.+++.+.+.++|.+.+.+ .+++|++||..+.       
T Consensus        80 -----~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~iss~~~~-------  146 (248)
T PRK05557         80 -----EFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQR-SGRIINISSVVGL-------  146 (248)
T ss_pred             -----HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEEcccccC-------
Confidence                 56789999999998643  34668899999999999999999999999998765 5799999998776       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  293 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  293 (365)
                                   .+.++...|+++|++++.+++++++++.   ..++++++++||+++|++.+....... .......+
T Consensus       147 -------------~~~~~~~~y~~sk~a~~~~~~~~a~~~~---~~~i~~~~v~pg~~~~~~~~~~~~~~~-~~~~~~~~  209 (248)
T PRK05557        147 -------------MGNPGQANYAASKAGVIGFTKSLARELA---SRGITVNAVAPGFIETDMTDALPEDVK-EAILAQIP  209 (248)
T ss_pred             -------------cCCCCCchhHHHHHHHHHHHHHHHHHhh---hhCeEEEEEecCccCCccccccChHHH-HHHHhcCC
Confidence                         5667788999999999999999999987   789999999999999998765432211 11122234


Q ss_pred             hcCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCcc
Q 017812          294 LGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRT  329 (365)
Q Consensus       294 ~~~~~~p~e~A~~i~~~~l~-~~~~~G~~~~~~~g~~  329 (365)
                      .+++.+|+++|+.+.+++.. +...+|+.+..++|..
T Consensus       210 ~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~i~~~~~  246 (248)
T PRK05557        210 LGRLGQPEEIASAVAFLASDEAAYITGQTLHVNGGMV  246 (248)
T ss_pred             CCCCcCHHHHHHHHHHHcCcccCCccccEEEecCCcc
Confidence            45678999999999864433 2356788888887643

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=100.00  E-value=2e-31  Score=237.65  Aligned_cols=221  Identities=19%  Similarity=0.210  Sum_probs=173.8

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCC--CEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           60 PVCIVTGATSGLGAAAAYALSREG--FHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G--~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      ++|+|||||+|||+++|++|+++|  ..|++..|+....          ..+.+++++++|+++.++++++.+       
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~----------~~~~~~~~~~~Dls~~~~~~~~~~-------   63 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD----------FQHDNVQWHALDVTDEAEIKQLSE-------   63 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc----------cccCceEEEEecCCCHHHHHHHHH-------
Confidence            479999999999999999999985  5777777765321          113578899999999999887543       


Q ss_pred             ccCCCCCeeEEEecCCcccC--------CCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccc
Q 017812          138 DSDMHSSIQLLINNAGILAT--------SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVF  209 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~--------~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~  209 (365)
                         ..+++|++|||||+...        ..+.+.+.++..+++|+.+++.+++.++|.|++++ .++|+++||..+... 
T Consensus        64 ---~~~~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~-~~~i~~iss~~~~~~-  138 (235)
T PRK09009         64 ---QFTQLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSE-SAKFAVISAKVGSIS-  138 (235)
T ss_pred             ---hcCCCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccC-CceEEEEeecccccc-
Confidence               34789999999998632        23567788999999999999999999999998765 589999998765311 


Q ss_pred             cccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHH
Q 017812          210 NAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFT  289 (365)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~  289 (365)
                                      ..+.+++..|++||+++++|+++|+.|+... .++|+|++|+||+++|++.+....        
T Consensus       139 ----------------~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~-~~~i~v~~v~PG~v~t~~~~~~~~--------  193 (235)
T PRK09009        139 ----------------DNRLGGWYSYRASKAALNMFLKTLSIEWQRS-LKHGVVLALHPGTTDTALSKPFQQ--------  193 (235)
T ss_pred             ----------------cCCCCCcchhhhhHHHHHHHHHHHHHHhhcc-cCCeEEEEEcccceecCCCcchhh--------
Confidence                            0234567799999999999999999998721 269999999999999999764321        


Q ss_pred             HHHHhcCCCCHHHHHHHHHHHhcCCC-CCcccEEeCCCCc
Q 017812          290 VLKLLGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKGR  328 (365)
Q Consensus       290 ~~~~~~~~~~p~e~A~~i~~~~l~~~-~~~G~~~~~~~g~  328 (365)
                       ..+.+++.+|||+|+.+++++.... ..+|.++..++++
T Consensus       194 -~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~g~~  232 (235)
T PRK09009        194 -NVPKGKLFTPEYVAQCLLGIIANATPAQSGSFLAYDGET  232 (235)
T ss_pred             -ccccCCCCCHHHHHHHHHHHHHcCChhhCCcEEeeCCcC
Confidence             1244567799999999997665543 5689998766654

>PRK07041 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-31  Score=235.91  Aligned_cols=224  Identities=19%  Similarity=0.230  Sum_probs=180.8

Q ss_pred             EEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhccCCC
Q 017812           63 IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMH  142 (365)
Q Consensus        63 lITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~~~~  142 (365)
                      +||||++|||++++++|+++|++|++++|+.+++++..+++..   +.+++++.+|++|.+++.+++++          .
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~----------~   67 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGG---GAPVRTAALDITDEAAVDAFFAE----------A   67 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc---CCceEEEEccCCCHHHHHHHHHh----------c
Confidence            6999999999999999999999999999998887777666642   45688999999999999887764          3


Q ss_pred             CCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCccccc
Q 017812          143 SSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITG  220 (365)
Q Consensus       143 ~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~~~~  220 (365)
                      +++|++|||||...  +..+.+.+++++++++|+.+++.+++  .+.+.+   .|+||++||.++.              
T Consensus        68 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~--~~~~~~---~g~iv~~ss~~~~--------------  128 (230)
T PRK07041         68 GPFDHVVITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVAR--AARIAP---GGSLTFVSGFAAV--------------  128 (230)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHh--hhhhcC---CeEEEEECchhhc--------------
Confidence            67999999999863  34566889999999999999999999  455532   5899999999988              


Q ss_pred             cccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHH--HH-HHHHHHHhcCC
Q 017812          221 KFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLS--LM-AFTVLKLLGLL  297 (365)
Q Consensus       221 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~--~~-~~~~~~~~~~~  297 (365)
                            .+.++...|++||+++++++++++.|+.     +|++++++||+++|++....+....  .. ......+.+++
T Consensus       129 ------~~~~~~~~Y~~sK~a~~~~~~~la~e~~-----~irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (230)
T PRK07041        129 ------RPSASGVLQGAINAALEALARGLALELA-----PVRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLPARRV  197 (230)
T ss_pred             ------CCCCcchHHHHHHHHHHHHHHHHHHHhh-----CceEEEEeecccccHHHHhhhccchHHHHHHHHhcCCCCCC
Confidence                  6778889999999999999999999985     3999999999999998654322111  11 11112245567


Q ss_pred             CCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017812          298 QSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  330 (365)
Q Consensus       298 ~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~  330 (365)
                      .+|+|+|+.+++++. +...+|+.+..++|+++
T Consensus       198 ~~~~dva~~~~~l~~-~~~~~G~~~~v~gg~~~  229 (230)
T PRK07041        198 GQPEDVANAILFLAA-NGFTTGSTVLVDGGHAI  229 (230)
T ss_pred             cCHHHHHHHHHHHhc-CCCcCCcEEEeCCCeec
Confidence            899999999996543 44577889888888764

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.8e-31  Score=258.78  Aligned_cols=236  Identities=21%  Similarity=0.261  Sum_probs=189.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCc--hhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS--HLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  133 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~  133 (365)
                      .+++++++||||++|||+++|++|+++|++|++++|..  +.+++..+++       ....+.+|++|.++++++++.+.
T Consensus       207 ~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~-------~~~~~~~Dv~~~~~~~~~~~~~~  279 (450)
T PRK08261        207 PLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRV-------GGTALALDITAPDAPARIAEHLA  279 (450)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHc-------CCeEEEEeCCCHHHHHHHHHHHH
Confidence            46799999999999999999999999999999999853  3333333222       23578999999999999999988


Q ss_pred             HHHhccCCCCCeeEEEecCCcccC--CCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017812          134 QWLLDSDMHSSIQLLINNAGILAT--SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  211 (365)
Q Consensus       134 ~~~~~~~~~~~id~lv~nAG~~~~--~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~  211 (365)
                      +      .++++|++|||||+...  ..+.+.+.++.++++|+.|+++++++++|.+..++ .++||++||.++.     
T Consensus       280 ~------~~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~g~iv~~SS~~~~-----  347 (450)
T PRK08261        280 E------RHGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGD-GGRIVGVSSISGI-----  347 (450)
T ss_pred             H------hCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcC-CCEEEEECChhhc-----
Confidence            7      56789999999998643  34678999999999999999999999999655443 5899999999887     


Q ss_pred             cCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHH
Q 017812          212 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVL  291 (365)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~  291 (365)
                                     .+.+++..|+++|+++++|+++++.++.   ..||++++|+||+++|++....+...... ....
T Consensus       348 ---------------~g~~~~~~Y~asKaal~~~~~~la~el~---~~gi~v~~v~PG~i~t~~~~~~~~~~~~~-~~~~  408 (450)
T PRK08261        348 ---------------AGNRGQTNYAASKAGVIGLVQALAPLLA---ERGITINAVAPGFIETQMTAAIPFATREA-GRRM  408 (450)
T ss_pred             ---------------CCCCCChHHHHHHHHHHHHHHHHHHHHh---hhCcEEEEEEeCcCcchhhhccchhHHHH-Hhhc
Confidence                           6677889999999999999999999998   78999999999999999987654322111 1122


Q ss_pred             HHhcCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCcc
Q 017812          292 KLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRT  329 (365)
Q Consensus       292 ~~~~~~~~p~e~A~~i~~~~l~-~~~~~G~~~~~~~g~~  329 (365)
                      .++.+..+|+|+|+++++++.. +...+|+.+..+++..
T Consensus       409 ~~l~~~~~p~dva~~~~~l~s~~~~~itG~~i~v~g~~~  447 (450)
T PRK08261        409 NSLQQGGLPVDVAETIAWLASPASGGVTGNVVRVCGQSL  447 (450)
T ss_pred             CCcCCCCCHHHHHHHHHHHhChhhcCCCCCEEEECCCcc
Confidence            3455667999999999954321 1245799988877654

>PRK12829 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.9e-31  Score=238.08  Aligned_cols=241  Identities=27%  Similarity=0.325  Sum_probs=194.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      ++++++++||||+||||++++++|+++|++|++++|+.+..+++.++..    +.++.++.+|++|++++.++++++.+ 
T Consensus         8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~-   82 (264)
T PRK12829          8 PLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLP----GAKVTATVADVADPAQVERVFDTAVE-   82 (264)
T ss_pred             ccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh----cCceEEEEccCCCHHHHHHHHHHHHH-
Confidence            4678999999999999999999999999999999999877666555542    22678999999999999999999887 


Q ss_pred             HhccCCCCCeeEEEecCCcccC---CCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017812          136 LLDSDMHSSIQLLINNAGILAT---SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~~---~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~  212 (365)
                           ..+++|++|||||...+   ....+.+++++++++|+.+++.+++.+++.+...+..++|+++||.++.      
T Consensus        83 -----~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~------  151 (264)
T PRK12829         83 -----RFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGR------  151 (264)
T ss_pred             -----HhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccc------
Confidence                 55789999999998622   3466889999999999999999999999998876523789999998876      


Q ss_pred             CCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH----------
Q 017812          213 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF----------  282 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~----------  282 (365)
                                    .+.++...|+.+|++++.+++.++.++.   ..++++++++||++.|++.......          
T Consensus       152 --------------~~~~~~~~y~~~K~a~~~~~~~l~~~~~---~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~  214 (264)
T PRK12829        152 --------------LGYPGRTPYAASKWAVVGLVKSLAIELG---PLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLD  214 (264)
T ss_pred             --------------cCCCCCchhHHHHHHHHHHHHHHHHHHh---hcCeEEEEEecCCcCChHHHHHhhhhhhccCCChh
Confidence                          6667778899999999999999999987   7899999999999999986543211          


Q ss_pred             HHHHHHHHHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017812          283 LSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  329 (365)
Q Consensus       283 ~~~~~~~~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~  329 (365)
                      ..........+.+++.+++++|+.++.++... +..+|++|..++|+.
T Consensus       215 ~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~i~~g~~  262 (264)
T PRK12829        215 EMEQEYLEKISLGRMVEPEDIAATALFLASPAARYITGQAISVDGNVE  262 (264)
T ss_pred             HHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCccCcEEEeCCCcc
Confidence            00111111123446789999999998655432 345799998888764

>PRK06181 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.2e-31  Score=240.29  Aligned_cols=221  Identities=27%  Similarity=0.324  Sum_probs=182.8

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhc
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  138 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~  138 (365)
                      +++++||||+||||++++++|+++|++|++++|+.++.+++.+++...  +.++.++.+|++|.+++..+++++.+    
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~----   74 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADH--GGEALVVPTDVSDAEACERLIEAAVA----   74 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHH----
Confidence            468999999999999999999999999999999998888877777654  45788999999999999999999887    


Q ss_pred             cCCCCCeeEEEecCCcccC--CCCC-CHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCC
Q 017812          139 SDMHSSIQLLINNAGILAT--SSRL-TPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNN  215 (365)
Q Consensus       139 ~~~~~~id~lv~nAG~~~~--~~~~-~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~  215 (365)
                        ..+++|++|||||....  ..+. +.+.+++.+++|+.+++.+++.++|+|.+..  ++||++||..+.         
T Consensus        75 --~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--~~iv~~sS~~~~---------  141 (263)
T PRK06181         75 --RFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASR--GQIVVVSSLAGL---------  141 (263)
T ss_pred             --HcCCCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--CEEEEEeccccc---------
Confidence              56789999999998633  3455 7888999999999999999999999997653  899999999887         


Q ss_pred             ccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhc
Q 017812          216 ETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLG  295 (365)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  295 (365)
                                 .+.++...|+.||++++.++++++.++.   ..+|++++++||++.|++.+..................
T Consensus       142 -----------~~~~~~~~Y~~sK~~~~~~~~~l~~~~~---~~~i~~~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~  207 (263)
T PRK06181        142 -----------TGVPTRSGYAASKHALHGFFDSLRIELA---DDGVAVTVVCPGFVATDIRKRALDGDGKPLGKSPMQES  207 (263)
T ss_pred             -----------CCCCCccHHHHHHHHHHHHHHHHHHHhh---hcCceEEEEecCccccCcchhhcccccccccccccccc
Confidence                       6677788999999999999999999997   78999999999999999876432110000000000112


Q ss_pred             CCCCHHHHHHHHHHHhc
Q 017812          296 LLQSPEKGINSVLDAAL  312 (365)
Q Consensus       296 ~~~~p~e~A~~i~~~~l  312 (365)
                      ++.+|+|+|+.+++++.
T Consensus       208 ~~~~~~dva~~i~~~~~  224 (263)
T PRK06181        208 KIMSAEECAEAILPAIA  224 (263)
T ss_pred             CCCCHHHHHHHHHHHhh
Confidence            56799999999997654

>PRK07023 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.1e-31  Score=236.83  Aligned_cols=221  Identities=27%  Similarity=0.344  Sum_probs=176.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHH-HHHHHhcc
Q 017812           61 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDS-LQQWLLDS  139 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~-~~~~~~~~  139 (365)
                      +++||||+||||+++|++|+++|++|++++|+.+..  .    .. ..+.++.++++|++|.+++++++++ +.+.+.  
T Consensus         3 ~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~--~----~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~--   73 (243)
T PRK07023          3 RAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS--L----AA-AAGERLAEVELDLSDAAAAAAWLAGDLLAAFV--   73 (243)
T ss_pred             eEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh--h----hh-ccCCeEEEEEeccCCHHHHHHHHHHHHHHHhc--
Confidence            699999999999999999999999999999986531  1    11 1245788999999999999997776 444221  


Q ss_pred             CCCCCeeEEEecCCccc---CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017812          140 DMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  216 (365)
Q Consensus       140 ~~~~~id~lv~nAG~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~  216 (365)
                       ..+++|++|||||...   +..+.+.+++++.+++|+.|++.+++.++|.|.+++ .++||++||.++.          
T Consensus        74 -~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~----------  141 (243)
T PRK07023         74 -DGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAA-ERRILHISSGAAR----------  141 (243)
T ss_pred             -cCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccC-CCEEEEEeChhhc----------
Confidence             2357999999999863   344668899999999999999999999999998765 6899999999887          


Q ss_pred             cccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh-----HHHHHHHHHH
Q 017812          217 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS-----FLSLMAFTVL  291 (365)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~-----~~~~~~~~~~  291 (365)
                                .+.+++..|++||++++++++.++.+ .   ..||++++|+||+++|++......     ......+...
T Consensus       142 ----------~~~~~~~~Y~~sK~a~~~~~~~~~~~-~---~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~  207 (243)
T PRK07023        142 ----------NAYAGWSVYCATKAALDHHARAVALD-A---NRALRIVSLAPGVVDTGMQATIRATDEERFPMRERFREL  207 (243)
T ss_pred             ----------CCCCCchHHHHHHHHHHHHHHHHHhc-C---CCCcEEEEecCCccccHHHHHHHhcccccchHHHHHHHh
Confidence                      77788899999999999999999999 5   789999999999999998643211     1111123334


Q ss_pred             HHhcCCCCHHHHHHHHHHHhcCCCC
Q 017812          292 KLLGLLQSPEKGINSVLDAALAPPE  316 (365)
Q Consensus       292 ~~~~~~~~p~e~A~~i~~~~l~~~~  316 (365)
                      .+.+++.+|+|+|+.++..++.++.
T Consensus       208 ~~~~~~~~~~~va~~~~~~l~~~~~  232 (243)
T PRK07023        208 KASGALSTPEDAARRLIAYLLSDDF  232 (243)
T ss_pred             hhcCCCCCHHHHHHHHHHHHhcccc
Confidence            4567888999999977754544443

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.2e-30  Score=233.97  Aligned_cols=242  Identities=24%  Similarity=0.320  Sum_probs=195.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCch-hHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH-LLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      +++.|+++||||||+||++++++|+++|++|+++.|+.+ ..+...+.+...  +.+++++.+|++|++++.++++++.+
T Consensus         3 ~~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~   80 (249)
T PRK12825          3 SLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEAL--GRRAQAVQADVTDKAALEAAVAAAVE   80 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhc--CCceEEEECCcCCHHHHHHHHHHHHH
Confidence            356789999999999999999999999999888776654 444455555443  45688999999999999999998877


Q ss_pred             HHhccCCCCCeeEEEecCCcccC--CCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017812          135 WLLDSDMHSSIQLLINNAGILAT--SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~~--~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~  212 (365)
                            ..+++|++|||||...+  ..+.+.++++..+++|+.+++.+++.+.|++.+.+ .+++|++||..+.      
T Consensus        81 ------~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~i~~SS~~~~------  147 (249)
T PRK12825         81 ------RFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQR-GGRIVNISSVAGL------  147 (249)
T ss_pred             ------HcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEECccccC------
Confidence                  45789999999997643  33568889999999999999999999999998776 6899999999887      


Q ss_pred             CCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHH
Q 017812          213 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLK  292 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~  292 (365)
                                    .+.++...|+.+|++++++++.+++++.   ..|++++.++||.+.|++............ ....
T Consensus       148 --------------~~~~~~~~y~~sK~~~~~~~~~~~~~~~---~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~-~~~~  209 (249)
T PRK12825        148 --------------PGWPGRSNYAAAKAGLVGLTKALARELA---EYGITVNMVAPGDIDTDMKEATIEEAREAK-DAET  209 (249)
T ss_pred             --------------CCCCCchHHHHHHHHHHHHHHHHHHHHh---hcCeEEEEEEECCccCCccccccchhHHhh-hccC
Confidence                          5667788999999999999999999987   789999999999999998765432221111 1123


Q ss_pred             HhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017812          293 LLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  330 (365)
Q Consensus       293 ~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~  330 (365)
                      +.+++.+++|+|+.+.+++... ...+|++|..++|.++
T Consensus       210 ~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~i~~g~~~  248 (249)
T PRK12825        210 PLGRSGTPEDIARAVAFLCSDASDYITGQVIEVTGGVDV  248 (249)
T ss_pred             CCCCCcCHHHHHHHHHHHhCccccCcCCCEEEeCCCEee
Confidence            4556789999999999655332 2457999999988664

>PRK08324 short chain dehydrogenase; Validated

Probab=100.00  E-value=9.1e-31  Score=266.32  Aligned_cols=247  Identities=21%  Similarity=0.227  Sum_probs=203.7

Q ss_pred             CCCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHH
Q 017812           53 PITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  132 (365)
Q Consensus        53 ~~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~  132 (365)
                      ....+.||+++||||+||||+++|++|+++|++|++++|+.++++++.+++...   .++.++.+|++|++++.++++++
T Consensus       416 ~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~---~~v~~v~~Dvtd~~~v~~~~~~~  492 (681)
T PRK08324        416 KPKPLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGP---DRALGVACDVTDEAAVQAAFEEA  492 (681)
T ss_pred             CCcCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhcc---CcEEEEEecCCCHHHHHHHHHHH
Confidence            334578999999999999999999999999999999999998888877776543   47889999999999999999988


Q ss_pred             HHHHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc
Q 017812          133 QQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN  210 (365)
Q Consensus       133 ~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~  210 (365)
                      .+      .++++|++|||||+..  +..+.+.++++.++++|+.|++.+++.+.|.|++++..|+||++||..+.    
T Consensus       493 ~~------~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~----  562 (681)
T PRK08324        493 AL------AFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAV----  562 (681)
T ss_pred             HH------HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCcccc----
Confidence            87      5688999999999863  34567899999999999999999999999999886534899999999887    


Q ss_pred             ccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcc--cCCccccchhH------
Q 017812          211 AQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVV--KTNIMREVPSF------  282 (365)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v--~T~~~~~~~~~------  282 (365)
                                      .+.++...|++||++++.++++++.++.   ..||++++|+||.|  .|++.......      
T Consensus       563 ----------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gIrvn~v~Pg~v~~~t~~~~~~~~~~~~~~~  623 (681)
T PRK08324        563 ----------------NPGPNFGAYGAAKAAELHLVRQLALELG---PDGIRVNGVNPDAVVRGSGIWTGEWIEARAAAY  623 (681)
T ss_pred             ----------------CCCCCcHHHHHHHHHHHHHHHHHHHHhc---ccCeEEEEEeCceeecCCccccchhhhhhhhhc
Confidence                            6677889999999999999999999998   78999999999999  88875432100      


Q ss_pred             ----HH-HHHHHHHHHhcCCCCHHHHHHHHHHHhc-CCCCCcccEEeCCCCcccc
Q 017812          283 ----LS-LMAFTVLKLLGLLQSPEKGINSVLDAAL-APPETSGVYFFGGKGRTVN  331 (365)
Q Consensus       283 ----~~-~~~~~~~~~~~~~~~p~e~A~~i~~~~l-~~~~~~G~~~~~~~g~~~~  331 (365)
                          .. ........+++++.+|+|+|+++++++. .....+|..+..++|....
T Consensus       624 g~~~~~~~~~~~~~~~l~~~v~~~DvA~a~~~l~s~~~~~~tG~~i~vdgG~~~~  678 (681)
T PRK08324        624 GLSEEELEEFYRARNLLKREVTPEDVAEAVVFLASGLLSKTTGAIITVDGGNAAA  678 (681)
T ss_pred             cCChHHHHHHHHhcCCcCCccCHHHHHHHHHHHhCccccCCcCCEEEECCCchhc
Confidence                00 0011222345577899999999996543 2345689999999887653

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=100.00  E-value=1.1e-30  Score=235.17  Aligned_cols=217  Identities=34%  Similarity=0.429  Sum_probs=176.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchh--HHHHHHHHHhhcCC-CceEEEEecCCC-hhhHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHL--LSETMADITSRNKD-ARLEAFQVDLSS-FQSVLKFKDS  131 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~--~~~~~~~l~~~~~~-~~~~~~~~Dls~-~~~v~~~~~~  131 (365)
                      ++++|+++||||++|||+++|++|+++|++|+++.|+.+.  .+.+.+...  ..+ ..+.+..+|+++ .++++.+++.
T Consensus         2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~Dvs~~~~~v~~~~~~   79 (251)
T COG1028           2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIK--EAGGGRAAAVAADVSDDEESVEALVAA   79 (251)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHH--hcCCCcEEEEEecCCCCHHHHHHHHHH
Confidence            3678999999999999999999999999999998888764  444444443  112 368888999998 9999999999


Q ss_pred             HHHHHhccCCCCCeeEEEecCCccc---CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccc
Q 017812          132 LQQWLLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNV  208 (365)
Q Consensus       132 ~~~~~~~~~~~~~id~lv~nAG~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~  208 (365)
                      +.+      ..+++|++|||||+..   +..+.+.+++++++++|+.|++.+++.+.|.+++   . +||++||..+. .
T Consensus        80 ~~~------~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~---~-~Iv~isS~~~~-~  148 (251)
T COG1028          80 AEE------EFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKK---Q-RIVNISSVAGL-G  148 (251)
T ss_pred             HHH------HcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhh---C-eEEEECCchhc-C
Confidence            998      5788999999999974   5668889999999999999999999988888883   2 99999999875 2


Q ss_pred             ccccCCCccccccccccCCCCCh-hhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHH---
Q 017812          209 FNAQVNNETITGKFFLRSKCYPC-ARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLS---  284 (365)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~---  284 (365)
                                          .++ ..+|++||+|+.+|+++++.|+.   +.||++++|+||+++|++.+.......   
T Consensus       149 --------------------~~~~~~~Y~~sK~al~~~~~~l~~e~~---~~gi~v~~v~PG~~~t~~~~~~~~~~~~~~  205 (251)
T COG1028         149 --------------------GPPGQAAYAASKAALIGLTKALALELA---PRGIRVNAVAPGYIDTPMTAALESAELEAL  205 (251)
T ss_pred             --------------------CCCCcchHHHHHHHHHHHHHHHHHHHh---hhCcEEEEEEeccCCCcchhhhhhhhhhHH
Confidence                                222 58999999999999999999987   789999999999999999876433220   


Q ss_pred             HHHHHHHHHhcCCCCHHHHHHHHHH
Q 017812          285 LMAFTVLKLLGLLQSPEKGINSVLD  309 (365)
Q Consensus       285 ~~~~~~~~~~~~~~~p~e~A~~i~~  309 (365)
                      ...... .+.++...|++++..+.+
T Consensus       206 ~~~~~~-~~~~~~~~~~~~~~~~~~  229 (251)
T COG1028         206 KRLAAR-IPLGRLGTPEEVAAAVAF  229 (251)
T ss_pred             HHHHhc-CCCCCCcCHHHHHHHHHH
Confidence            000000 033367789999998883

>PRK07201 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.3e-31  Score=269.36  Aligned_cols=217  Identities=26%  Similarity=0.334  Sum_probs=186.7

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      .++++|+++|||||+|||+++|++|+++|++|++++|+++.++++.+++...  +.++.++++|++|.++++++++++.+
T Consensus       367 ~~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~  444 (657)
T PRK07201        367 GPLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAK--GGTAHAYTCDLTDSAAVDHTVKDILA  444 (657)
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999999998888888665  45789999999999999999999988


Q ss_pred             HHhccCCCCCeeEEEecCCcccCC--CCC--CHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc
Q 017812          135 WLLDSDMHSSIQLLINNAGILATS--SRL--TPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN  210 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~~~--~~~--~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~  210 (365)
                            .++++|++|||||+....  .+.  +.+++++++++|+.|++.+++.++|.|++++ .|+||++||.++.    
T Consensus       445 ------~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~----  513 (657)
T PRK07201        445 ------EHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERR-FGHVVNVSSIGVQ----  513 (657)
T ss_pred             ------hcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC-CCEEEEECChhhc----
Confidence                  668899999999985322  111  2578999999999999999999999998876 6899999999987    


Q ss_pred             ccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHH
Q 017812          211 AQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTV  290 (365)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~  290 (365)
                                      .+.++.+.|++||+++++|+++++.|+.   +.||+|++|+||+|+|++.......        
T Consensus       514 ----------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~~i~v~~v~pg~v~T~~~~~~~~~--------  566 (657)
T PRK07201        514 ----------------TNAPRFSAYVASKAALDAFSDVAASETL---SDGITFTTIHMPLVRTPMIAPTKRY--------  566 (657)
T ss_pred             ----------------CCCCCcchHHHHHHHHHHHHHHHHHHHH---hhCCcEEEEECCcCcccccCccccc--------
Confidence                            6677888999999999999999999998   7899999999999999997542110        


Q ss_pred             HHHhcCCCCHHHHHHHHHHHhcC
Q 017812          291 LKLLGLLQSPEKGINSVLDAALA  313 (365)
Q Consensus       291 ~~~~~~~~~p~e~A~~i~~~~l~  313 (365)
                        ......+|+++|+.++..+..
T Consensus       567 --~~~~~~~~~~~a~~i~~~~~~  587 (657)
T PRK07201        567 --NNVPTISPEEAADMVVRAIVE  587 (657)
T ss_pred             --cCCCCCCHHHHHHHHHHHHHh
Confidence              011346999999999976654

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.98  E-value=2e-30  Score=232.16  Aligned_cols=241  Identities=24%  Similarity=0.355  Sum_probs=198.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      ++.+++++||||+++||.+++++|+++|++|++++|++++.+....++...  +.++.++.+|++|++++.++++++.+ 
T Consensus         2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~-   78 (246)
T PRK05653          2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAA--GGEARVLVFDVSDEAAVRALIEAAVE-   78 (246)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHH-
Confidence            356789999999999999999999999999999999998888777777654  45788999999999999999998877 


Q ss_pred             HhccCCCCCeeEEEecCCcccC--CCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGILAT--SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~~--~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                           ..+++|++|||||....  ..+.+.++++..+++|+.+++.+++.+.|+|.+.+ .++||++||..+.       
T Consensus        79 -----~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~~ss~~~~-------  145 (246)
T PRK05653         79 -----AFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKAR-YGRIVNISSVSGV-------  145 (246)
T ss_pred             -----HhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECcHHhc-------
Confidence                 45789999999998633  44678899999999999999999999999997765 5899999998876       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  293 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  293 (365)
                                   .+.++...|+.+|++++.+++++++++.   ..++++++++||.+.|++......... .......+
T Consensus       146 -------------~~~~~~~~y~~sk~~~~~~~~~l~~~~~---~~~i~~~~i~pg~~~~~~~~~~~~~~~-~~~~~~~~  208 (246)
T PRK05653        146 -------------TGNPGQTNYSAAKAGVIGFTKALALELA---SRGITVNAVAPGFIDTDMTEGLPEEVK-AEILKEIP  208 (246)
T ss_pred             -------------cCCCCCcHhHhHHHHHHHHHHHHHHHHh---hcCeEEEEEEeCCcCCcchhhhhHHHH-HHHHhcCC
Confidence                         5566778899999999999999999987   789999999999999998764332211 11112233


Q ss_pred             hcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017812          294 LGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  329 (365)
Q Consensus       294 ~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~  329 (365)
                      .+.+.+++++|+.+++++... ...+|.++..++|+.
T Consensus       209 ~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~gg~~  245 (246)
T PRK05653        209 LGRLGQPEEVANAVAFLASDAASYITGQVIPVNGGMY  245 (246)
T ss_pred             CCCCcCHHHHHHHHHHHcCchhcCccCCEEEeCCCee
Confidence            456779999999999765432 255789998888764

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.98  E-value=1.6e-30  Score=234.37  Aligned_cols=239  Identities=21%  Similarity=0.242  Sum_probs=194.2

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhc
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  138 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~  138 (365)
                      +|++|||||+++||++++++|+++|++|++++|+.+..+++.+++...  +.++..+++|++|.+++.++++++.+    
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~----   74 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDA--GGSVIYLVADVTKEDEIADMIAAAAA----   74 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHH----
Confidence            478999999999999999999999999999999988887777776543  45788999999999999999999987    


Q ss_pred             cCCCCCeeEEEecCCcccC--CCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017812          139 SDMHSSIQLLINNAGILAT--SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  216 (365)
Q Consensus       139 ~~~~~~id~lv~nAG~~~~--~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~  216 (365)
                        ..+++|++|||||....  ..+.+++++++++++|+.|++.+++.++|.|.+.+ .+++|++||..+.          
T Consensus        75 --~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~~v~~ss~~~~----------  141 (255)
T TIGR01963        75 --EFGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQG-WGRIINIASAHGL----------  141 (255)
T ss_pred             --hcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEEcchhhc----------
Confidence              45789999999998643  34567889999999999999999999999998765 6799999998877          


Q ss_pred             cccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHH--------HHH--
Q 017812          217 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFL--------SLM--  286 (365)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~--------~~~--  286 (365)
                                .+.+....|+.+|++++.++++++.++.   ..+|+++.++||++.|++.+......        ...  
T Consensus       142 ----------~~~~~~~~y~~sk~a~~~~~~~~~~~~~---~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~  208 (255)
T TIGR01963       142 ----------VASPFKSAYVAAKHGLIGLTKVLALEVA---AHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIR  208 (255)
T ss_pred             ----------CCCCCCchhHHHHHHHHHHHHHHHHHhh---hcCeEEEEEecCccccHHHHHHHHhhhcccCCCchHHHH
Confidence                      5667788999999999999999999987   67999999999999999754321100        000  


Q ss_pred             -HHHHHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017812          287 -AFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  329 (365)
Q Consensus       287 -~~~~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~  329 (365)
                       ......+.+.+.+++|+|+++++++... ...+|++|..++|..
T Consensus       209 ~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~~~~g~~~~~~~g~~  253 (255)
T TIGR01963       209 EVMLPGQPTKRFVTVDEVAETALFLASDAAAGITGQAIVLDGGWT  253 (255)
T ss_pred             HHHHccCccccCcCHHHHHHHHHHHcCccccCccceEEEEcCccc
Confidence             0111112235689999999999766543 345789888887764

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.98  E-value=4.7e-31  Score=236.05  Aligned_cols=202  Identities=22%  Similarity=0.311  Sum_probs=169.1

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhcc
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  139 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~  139 (365)
                      ++++||||++|||+++|++|+++|++|++++|++++++++.+.      ..++.++++|++|.++++++++++.      
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~------   69 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQ------SANIFTLAFDVTDHPGTKAALSQLP------   69 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh------cCCCeEEEeeCCCHHHHHHHHHhcc------
Confidence            6899999999999999999999999999999998776655432      2367889999999999999887653      


Q ss_pred             CCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcc
Q 017812          140 DMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNET  217 (365)
Q Consensus       140 ~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~  217 (365)
                         ..+|++|||||...  +..+.+.+++++++++|+.|++++++.++|+|.+   .++||++||.++.           
T Consensus        70 ---~~~d~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~iv~isS~~~~-----------  132 (240)
T PRK06101         70 ---FIPELWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSC---GHRVVIVGSIASE-----------  132 (240)
T ss_pred             ---cCCCEEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhc---CCeEEEEechhhc-----------
Confidence               24799999999753  2335688999999999999999999999999964   3689999998877           


Q ss_pred             ccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhcCC
Q 017812          218 ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLL  297 (365)
Q Consensus       218 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  297 (365)
                               .+.++...|++||+++++|+++++.|+.   .+||++++++||++.|++.......           ....
T Consensus       133 ---------~~~~~~~~Y~asK~a~~~~~~~l~~e~~---~~gi~v~~v~pg~i~t~~~~~~~~~-----------~~~~  189 (240)
T PRK06101        133 ---------LALPRAEAYGASKAAVAYFARTLQLDLR---PKGIEVVTVFPGFVATPLTDKNTFA-----------MPMI  189 (240)
T ss_pred             ---------cCCCCCchhhHHHHHHHHHHHHHHHHHH---hcCceEEEEeCCcCCCCCcCCCCCC-----------CCcc
Confidence                     6677888999999999999999999998   7899999999999999987643211           0123


Q ss_pred             CCHHHHHHHHHHHhcC
Q 017812          298 QSPEKGINSVLDAALA  313 (365)
Q Consensus       298 ~~p~e~A~~i~~~~l~  313 (365)
                      .+|+++|+.++..+..
T Consensus       190 ~~~~~~a~~i~~~i~~  205 (240)
T PRK06101        190 ITVEQASQEIRAQLAR  205 (240)
T ss_pred             cCHHHHHHHHHHHHhc
Confidence            5999999999965544

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.98  E-value=7.6e-31  Score=232.41  Aligned_cols=218  Identities=21%  Similarity=0.261  Sum_probs=175.6

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhcc
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  139 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~  139 (365)
                      |+++||||++|||.++|++|+++|++|++++|++++.+++. +   .   .++.++.+|++|+++++++++.+.+     
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~-~---~---~~~~~~~~D~~d~~~~~~~~~~~~~-----   69 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQ-A---L---PGVHIEKLDMNDPASLDQLLQRLQG-----   69 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHH-h---c---cccceEEcCCCCHHHHHHHHHHhhc-----
Confidence            68999999999999999999999999999999987655432 1   1   2567889999999999999887753     


Q ss_pred             CCCCCeeEEEecCCcccC----CCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCC
Q 017812          140 DMHSSIQLLINNAGILAT----SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNN  215 (365)
Q Consensus       140 ~~~~~id~lv~nAG~~~~----~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~  215 (365)
                         +++|++|||||+..+    ..+.+.+++++++++|+.+++.+++.++|.+++.  .++|+++||..+....      
T Consensus        70 ---~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~iv~~ss~~g~~~~------  138 (225)
T PRK08177         70 ---QRFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPG--QGVLAFMSSQLGSVEL------  138 (225)
T ss_pred             ---CCCCEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhc--CCEEEEEccCcccccc------
Confidence               579999999998632    3467889999999999999999999999999764  3799999997765110      


Q ss_pred             ccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhc
Q 017812          216 ETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLG  295 (365)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  295 (365)
                                 .+..++..|++||++++.|++++++|+.   ++||++++|+||+++|++.+...               
T Consensus       139 -----------~~~~~~~~Y~~sK~a~~~~~~~l~~e~~---~~~i~v~~i~PG~i~t~~~~~~~---------------  189 (225)
T PRK08177        139 -----------PDGGEMPLYKASKAALNSMTRSFVAELG---EPTLTVLSMHPGWVKTDMGGDNA---------------  189 (225)
T ss_pred             -----------CCCCCccchHHHHHHHHHHHHHHHHHhh---cCCeEEEEEcCCceecCCCCCCC---------------
Confidence                       2233556899999999999999999998   78999999999999999975421               


Q ss_pred             CCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017812          296 LLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  330 (365)
Q Consensus       296 ~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~  330 (365)
                       ..++++.++.++..........|..+....|+++
T Consensus       190 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (225)
T PRK08177        190 -PLDVETSVKGLVEQIEAASGKGGHRFIDYQGETL  223 (225)
T ss_pred             -CCCHHHHHHHHHHHHHhCCccCCCceeCcCCcCC
Confidence             1377888888887665555555555555666655

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.3e-30  Score=229.89  Aligned_cols=231  Identities=24%  Similarity=0.255  Sum_probs=192.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      .+++|+++||||+|+||++++++|+++|++|++++|+.++..+..+++...    .+..+.+|++|.+++.++++++.+ 
T Consensus         4 ~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~-   78 (239)
T PRK12828          4 SLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPAD----ALRIGGIDLVDPQAARRAVDEVNR-   78 (239)
T ss_pred             CCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhc----CceEEEeecCCHHHHHHHHHHHHH-
Confidence            367899999999999999999999999999999999988777766665432    456788999999999999999987 


Q ss_pred             HhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                           .++++|++|||||...  +....+.+++++.+++|+.+++.++++++|.+.+++ .++||++||..+.       
T Consensus        79 -----~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~-------  145 (239)
T PRK12828         79 -----QFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASG-GGRIVNIGAGAAL-------  145 (239)
T ss_pred             -----HhCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcC-CCEEEEECchHhc-------
Confidence                 5688999999999753  234568889999999999999999999999998765 6899999999877       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  293 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  293 (365)
                                   .+.+++..|+.+|++++.++++++.++.   ..+|+++.++||++.|++.......         ..
T Consensus       146 -------------~~~~~~~~y~~sk~a~~~~~~~~a~~~~---~~~i~~~~i~pg~v~~~~~~~~~~~---------~~  200 (239)
T PRK12828        146 -------------KAGPGMGAYAAAKAGVARLTEALAAELL---DRGITVNAVLPSIIDTPPNRADMPD---------AD  200 (239)
T ss_pred             -------------cCCCCcchhHHHHHHHHHHHHHHHHHhh---hcCeEEEEEecCcccCcchhhcCCc---------hh
Confidence                         5667788999999999999999999987   7899999999999999965432111         11


Q ss_pred             hcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017812          294 LGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  329 (365)
Q Consensus       294 ~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~  329 (365)
                      +..+.+++|+|+.+++++... ...+|+.+..++|+.
T Consensus       201 ~~~~~~~~dva~~~~~~l~~~~~~~~g~~~~~~g~~~  237 (239)
T PRK12828        201 FSRWVTPEQIAAVIAFLLSDEAQAITGASIPVDGGVA  237 (239)
T ss_pred             hhcCCCHHHHHHHHHHHhCcccccccceEEEecCCEe
Confidence            234568999999999655432 245799998888764

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.97  E-value=7.9e-30  Score=227.49  Aligned_cols=217  Identities=29%  Similarity=0.420  Sum_probs=184.1

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      +.+++++||||+|+||++++++|+++|++|++++|+++++++..+++...   .+++++++|+++.++++++++++.+  
T Consensus         4 ~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~D~~~~~~~~~~~~~~~~--   78 (237)
T PRK07326          4 LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK---GNVLGLAADVRDEADVQRAVDAIVA--   78 (237)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhcc---CcEEEEEccCCCHHHHHHHHHHHHH--
Confidence            56899999999999999999999999999999999998888887777543   4688999999999999999999887  


Q ss_pred             hccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017812          137 LDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  214 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~  214 (365)
                          ..+++|++|||||...  +..+.+.+++++++++|+.+++.+++++++.|.+.  .++||++||.++.        
T Consensus        79 ----~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~iv~~ss~~~~--------  144 (237)
T PRK07326         79 ----AFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRG--GGYIINISSLAGT--------  144 (237)
T ss_pred             ----HcCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHC--CeEEEEECChhhc--------
Confidence                5678999999999763  34567889999999999999999999999999443  4899999998876        


Q ss_pred             CccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHh
Q 017812          215 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLL  294 (365)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  294 (365)
                                  .+.++...|+.||+++.++++.++.++.   ..|+++++++||++.|++....+...          .
T Consensus       145 ------------~~~~~~~~y~~sk~a~~~~~~~~~~~~~---~~gi~v~~v~pg~~~t~~~~~~~~~~----------~  199 (237)
T PRK07326        145 ------------NFFAGGAAYNASKFGLVGFSEAAMLDLR---QYGIKVSTIMPGSVATHFNGHTPSEK----------D  199 (237)
T ss_pred             ------------cCCCCCchHHHHHHHHHHHHHHHHHHhc---ccCcEEEEEeeccccCcccccccchh----------h
Confidence                        5566678899999999999999999997   78999999999999999875543211          0


Q ss_pred             cCCCCHHHHHHHHHHHhcCCCCC
Q 017812          295 GLLQSPEKGINSVLDAALAPPET  317 (365)
Q Consensus       295 ~~~~~p~e~A~~i~~~~l~~~~~  317 (365)
                      ....+++|+|+.+++++..++..
T Consensus       200 ~~~~~~~d~a~~~~~~l~~~~~~  222 (237)
T PRK07326        200 AWKIQPEDIAQLVLDLLKMPPRT  222 (237)
T ss_pred             hccCCHHHHHHHHHHHHhCCccc
Confidence            01358999999999876665543

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.7e-30  Score=224.52  Aligned_cols=194  Identities=16%  Similarity=0.180  Sum_probs=161.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhccC
Q 017812           61 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  140 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~~  140 (365)
                      +++||||++|||+++|++|+++ ++|++++|+..                   .+++|++|++++++++++         
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-------------------~~~~D~~~~~~~~~~~~~---------   52 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-------------------DVQVDITDPASIRALFEK---------   52 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-------------------ceEecCCChHHHHHHHHh---------
Confidence            6999999999999999999999 99999999753                   368999999999888763         


Q ss_pred             CCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCccc
Q 017812          141 MHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETI  218 (365)
Q Consensus       141 ~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~~  218 (365)
                       .+++|++|||||...  +..+.+.+++++.+++|+.++++++++++|+|.+   .|+|+++||..+.            
T Consensus        53 -~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~g~iv~iss~~~~------------  116 (199)
T PRK07578         53 -VGKVDAVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLND---GGSFTLTSGILSD------------  116 (199)
T ss_pred             -cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCeEEEEcccccC------------
Confidence             367999999999753  3446788999999999999999999999999975   4799999999887            


Q ss_pred             cccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhcCCC
Q 017812          219 TGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQ  298 (365)
Q Consensus       219 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  298 (365)
                              .+.++...|++||+|+++|+++++.|+    ++||+|++|+||+++|++......          .+.....
T Consensus       117 --------~~~~~~~~Y~~sK~a~~~~~~~la~e~----~~gi~v~~i~Pg~v~t~~~~~~~~----------~~~~~~~  174 (199)
T PRK07578        117 --------EPIPGGASAATVNGALEGFVKAAALEL----PRGIRINVVSPTVLTESLEKYGPF----------FPGFEPV  174 (199)
T ss_pred             --------CCCCCchHHHHHHHHHHHHHHHHHHHc----cCCeEEEEEcCCcccCchhhhhhc----------CCCCCCC
Confidence                    777889999999999999999999998    368999999999999987421100          1122456


Q ss_pred             CHHHHHHHHHHHhcCCCCCcccEEe
Q 017812          299 SPEKGINSVLDAALAPPETSGVYFF  323 (365)
Q Consensus       299 ~p~e~A~~i~~~~l~~~~~~G~~~~  323 (365)
                      +|+|+|+.++.++  +...+|+.|.
T Consensus       175 ~~~~~a~~~~~~~--~~~~~g~~~~  197 (199)
T PRK07578        175 PAARVALAYVRSV--EGAQTGEVYK  197 (199)
T ss_pred             CHHHHHHHHHHHh--ccceeeEEec
Confidence            9999999988544  3445666554

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.97  E-value=1.2e-29  Score=226.29  Aligned_cols=233  Identities=27%  Similarity=0.380  Sum_probs=188.6

Q ss_pred             EEEecCCChHHHHHHHHHHHCCCEEEEEecCc-hhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhccC
Q 017812           62 CIVTGATSGLGAAAAYALSREGFHVVLVGRSS-HLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  140 (365)
Q Consensus        62 vlITGassGIG~~~a~~la~~G~~Vil~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~~  140 (365)
                      ++|||++++||.++|++|+++|++|++++|+. +.+++..+++...  +.+++++.+|++|+++++++++++.+      
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~------   72 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAY--GVKALGVVCDVSDREDVKAVVEEIEE------   72 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHH------
Confidence            58999999999999999999999999999975 5555666666544  45688999999999999999999887      


Q ss_pred             CCCCeeEEEecCCcccC--CCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCccc
Q 017812          141 MHSSIQLLINNAGILAT--SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETI  218 (365)
Q Consensus       141 ~~~~id~lv~nAG~~~~--~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~~  218 (365)
                      ..+++|++|||||....  ..+.+.+++++.+++|+.+++.+++.+.+.+.+.+ .+++|++||.++.            
T Consensus        73 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~~sS~~~~------------  139 (239)
T TIGR01830        73 ELGPIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQR-SGRIINISSVVGL------------  139 (239)
T ss_pred             HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEECCcccc------------
Confidence            55789999999998643  34567889999999999999999999999987654 5899999998877            


Q ss_pred             cccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhcCCC
Q 017812          219 TGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQ  298 (365)
Q Consensus       219 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  298 (365)
                              .+.++...|+.+|++++.++++++.++.   .+|+++++++||+++|++....+..... ......+.++..
T Consensus       140 --------~g~~~~~~y~~~k~a~~~~~~~l~~~~~---~~g~~~~~i~pg~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  207 (239)
T TIGR01830       140 --------MGNAGQANYAASKAGVIGFTKSLAKELA---SRNITVNAVAPGFIDTDMTDKLSEKVKK-KILSQIPLGRFG  207 (239)
T ss_pred             --------CCCCCCchhHHHHHHHHHHHHHHHHHHh---hcCeEEEEEEECCCCChhhhhcChHHHH-HHHhcCCcCCCc
Confidence                    6667788999999999999999999987   7899999999999999876544322111 112223445678


Q ss_pred             CHHHHHHHHHHHhcCC-CCCcccEEeCCCC
Q 017812          299 SPEKGINSVLDAALAP-PETSGVYFFGGKG  327 (365)
Q Consensus       299 ~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g  327 (365)
                      +++|+|+.+++++... ...+|+++..+.|
T Consensus       208 ~~~~~a~~~~~~~~~~~~~~~g~~~~~~~g  237 (239)
T TIGR01830       208 TPEEVANAVAFLASDEASYITGQVIHVDGG  237 (239)
T ss_pred             CHHHHHHHHHHHhCcccCCcCCCEEEeCCC
Confidence            9999999998655322 2457888876654

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.97  E-value=3.3e-30  Score=217.44  Aligned_cols=161  Identities=32%  Similarity=0.489  Sum_probs=146.4

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCC-EEEEEecC--chhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGF-HVVLVGRS--SHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~--~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      |+++||||++|||+++|++|+++|+ +|++++|+  .+..+++.+++...  +.++.++++|++++++++++++++.+  
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~--   76 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAP--GAKITFIECDLSDPESIRALIEEVIK--   76 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHT--TSEEEEEESETTSHHHHHHHHHHHHH--
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccc--cccccccccccccccccccccccccc--
Confidence            6899999999999999999999976 88999999  77788888888755  57999999999999999999999997  


Q ss_pred             hccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017812          137 LDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  214 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~  214 (365)
                          ..+++|++|||||+..  +..+.+.++++++|++|+.+++.+.++++|   +.  .|+||++||.++.        
T Consensus        77 ----~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~---~~--~g~iv~~sS~~~~--------  139 (167)
T PF00106_consen   77 ----RFGPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP---QG--GGKIVNISSIAGV--------  139 (167)
T ss_dssp             ----HHSSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH---HT--TEEEEEEEEGGGT--------
T ss_pred             ----ccccccccccccccccccccccccchhhhhccccccceeeeeeehhee---cc--ccceEEecchhhc--------
Confidence                5588999999999975  344668899999999999999999999999   22  5999999999998        


Q ss_pred             CccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHh
Q 017812          215 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNL  253 (365)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~  253 (365)
                                  .|.+++..|++||+|+.+|++++++|+
T Consensus       140 ------------~~~~~~~~Y~askaal~~~~~~la~e~  166 (167)
T PF00106_consen  140 ------------RGSPGMSAYSASKAALRGLTQSLAAEL  166 (167)
T ss_dssp             ------------SSSTTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ------------cCCCCChhHHHHHHHHHHHHHHHHHhc
Confidence                        899999999999999999999999986

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.9e-29  Score=225.73  Aligned_cols=215  Identities=20%  Similarity=0.230  Sum_probs=172.9

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhc
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  138 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~  138 (365)
                      +|+++||||+||||++++++|+++|++|++++|+.+..+++.+.....  +.++.++.+|++|++++.+.++        
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~--------   71 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARR--GLALRVEKLDLTDAIDRAQAAE--------   71 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcceEEEeeCCCHHHHHHHhc--------
Confidence            578999999999999999999999999999999988777766665544  3468899999999988766532        


Q ss_pred             cCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017812          139 SDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  216 (365)
Q Consensus       139 ~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~  216 (365)
                          +++|+||||||...  +..+.+.++++..+++|+.+++.+++.++|.+.+.+ .++||++||..+.          
T Consensus        72 ----~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~SS~~~~----------  136 (257)
T PRK09291         72 ----WDVDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARG-KGKVVFTSSMAGL----------  136 (257)
T ss_pred             ----CCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEcChhhc----------
Confidence                46999999999863  445678999999999999999999999999998876 5899999999877          


Q ss_pred             cccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH-HH----H---HHH
Q 017812          217 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF-LS----L---MAF  288 (365)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~-~~----~---~~~  288 (365)
                                .+.++...|++||++++.++++++.++.   +.||++++|+||++.|++....... ..    .   ...
T Consensus       137 ----------~~~~~~~~Y~~sK~a~~~~~~~l~~~~~---~~gi~~~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~  203 (257)
T PRK09291        137 ----------ITGPFTGAYCASKHALEAIAEAMHAELK---PFGIQVATVNPGPYLTGFNDTMAETPKRWYDPARNFTDP  203 (257)
T ss_pred             ----------cCCCCcchhHHHHHHHHHHHHHHHHHHH---hcCcEEEEEecCcccccchhhhhhhhhhhcchhhHHHhh
Confidence                      5667778999999999999999999987   7899999999999999886432211 00    0   000


Q ss_pred             HH-HHHhcCCCCHHHHHHHHHHHhc
Q 017812          289 TV-LKLLGLLQSPEKGINSVLDAAL  312 (365)
Q Consensus       289 ~~-~~~~~~~~~p~e~A~~i~~~~l  312 (365)
                      .. ..+. ...++++++..++..+.
T Consensus       204 ~~~~~~~-~~~~~~~~~~~~~~~l~  227 (257)
T PRK09291        204 EDLAFPL-EQFDPQEMIDAMVEVIP  227 (257)
T ss_pred             hhhhccc-cCCCHHHHHHHHHHHhc
Confidence            00 1111 23589999999886553

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=6.8e-29  Score=221.60  Aligned_cols=232  Identities=21%  Similarity=0.210  Sum_probs=185.6

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      +++|+++||||++|||.++++.|+++|++|++++|++++++++.+++...   .+++.+++|+++.+++.++++++..  
T Consensus         3 ~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~~--   77 (238)
T PRK05786          3 LKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKY---GNIHYVVGDVSSTESARNVIEKAAK--   77 (238)
T ss_pred             cCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCeEEEECCCCCHHHHHHHHHHHHH--
Confidence            57899999999999999999999999999999999998877766666432   3678899999999999999998876  


Q ss_pred             hccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017812          137 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  216 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~  216 (365)
                          .++++|.+|+|+|........+.++++..+++|+.+++.+.+.++|.+.+   .+++|++||..+..         
T Consensus        78 ----~~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~~ss~~~~~---------  141 (238)
T PRK05786         78 ----VLNAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKE---GSSIVLVSSMSGIY---------  141 (238)
T ss_pred             ----HhCCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhc---CCEEEEEecchhcc---------
Confidence                45789999999997543333345889999999999999999999999865   47999999987630         


Q ss_pred             cccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHh-c
Q 017812          217 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLL-G  295 (365)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~-~  295 (365)
                                .+.+....|++||++++.++++++.++.   .+||++++++||++.|++.....    ..   ...+. .
T Consensus       142 ----------~~~~~~~~Y~~sK~~~~~~~~~~~~~~~---~~gi~v~~i~pg~v~~~~~~~~~----~~---~~~~~~~  201 (238)
T PRK05786        142 ----------KASPDQLSYAVAKAGLAKAVEILASELL---GRGIRVNGIAPTTISGDFEPERN----WK---KLRKLGD  201 (238)
T ss_pred             ----------cCCCCchHHHHHHHHHHHHHHHHHHHHh---hcCeEEEEEecCccCCCCCchhh----hh---hhccccC
Confidence                      2445667899999999999999999997   78999999999999998753211    00   01111 2


Q ss_pred             CCCCHHHHHHHHHHHhcCCC-CCcccEEeCCCCcc
Q 017812          296 LLQSPEKGINSVLDAALAPP-ETSGVYFFGGKGRT  329 (365)
Q Consensus       296 ~~~~p~e~A~~i~~~~l~~~-~~~G~~~~~~~g~~  329 (365)
                      ...+++++|+.+++++.... ..+|.++..++|.-
T Consensus       202 ~~~~~~~va~~~~~~~~~~~~~~~g~~~~~~~~~~  236 (238)
T PRK05786        202 DMAPPEDFAKVIIWLLTDEADWVDGVVIPVDGGAR  236 (238)
T ss_pred             CCCCHHHHHHHHHHHhcccccCccCCEEEECCccc
Confidence            35799999999997664432 35788887776653

>PRK08264 short chain dehydrogenase; Validated

Probab=99.97  E-value=1.2e-28  Score=220.01  Aligned_cols=201  Identities=27%  Similarity=0.382  Sum_probs=172.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      ++++++++||||+||||+++|++|+++|+ +|++++|+.+++++         .+.++.++.+|++|.++++++++.   
T Consensus         3 ~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---------~~~~~~~~~~D~~~~~~~~~~~~~---   70 (238)
T PRK08264          3 DIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---------LGPRVVPLQLDVTDPASVAAAAEA---   70 (238)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---------cCCceEEEEecCCCHHHHHHHHHh---
Confidence            36789999999999999999999999999 99999999876543         145789999999999998887653   


Q ss_pred             HHhccCCCCCeeEEEecCCcc---cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017812          135 WLLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  211 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~---~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~  211 (365)
                             .+++|++|||||..   .+..+.+.+++++++++|+.+++.+++++.|.+++.+ .+++|++||..+.     
T Consensus        71 -------~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~~sS~~~~-----  137 (238)
T PRK08264         71 -------ASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANG-GGAIVNVLSVLSW-----  137 (238)
T ss_pred             -------cCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcChhhc-----
Confidence                   35799999999983   2345678999999999999999999999999998765 6899999998887     


Q ss_pred             cCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHH
Q 017812          212 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVL  291 (365)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~  291 (365)
                                     .+.++...|+.+|++++.+++.++.++.   +.|+++++++||.++|++....+.          
T Consensus       138 ---------------~~~~~~~~y~~sK~a~~~~~~~l~~~~~---~~~i~~~~v~pg~v~t~~~~~~~~----------  189 (238)
T PRK08264        138 ---------------VNFPNLGTYSASKAAAWSLTQALRAELA---PQGTRVLGVHPGPIDTDMAAGLDA----------  189 (238)
T ss_pred             ---------------cCCCCchHhHHHHHHHHHHHHHHHHHhh---hcCeEEEEEeCCcccccccccCCc----------
Confidence                           6777888999999999999999999997   789999999999999998654321          


Q ss_pred             HHhcCCCCHHHHHHHHHHHhcC
Q 017812          292 KLLGLLQSPEKGINSVLDAALA  313 (365)
Q Consensus       292 ~~~~~~~~p~e~A~~i~~~~l~  313 (365)
                          ...+++++|+.++..+..
T Consensus       190 ----~~~~~~~~a~~~~~~~~~  207 (238)
T PRK08264        190 ----PKASPADVARQILDALEA  207 (238)
T ss_pred             ----CCCCHHHHHHHHHHHHhC
Confidence                135899999999976543

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.2e-28  Score=220.69  Aligned_cols=198  Identities=21%  Similarity=0.178  Sum_probs=149.2

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      ..+++|+++|||||+|||+++|++|+++|++|++++|+.....+   .. ..  . ....+.+|++|.+++.+       
T Consensus        10 ~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~---~~-~~--~-~~~~~~~D~~~~~~~~~-------   75 (245)
T PRK12367         10 STWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSE---SN-DE--S-PNEWIKWECGKEESLDK-------   75 (245)
T ss_pred             HhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhh---hh-cc--C-CCeEEEeeCCCHHHHHH-------
Confidence            35789999999999999999999999999999999998732111   11 11  1 12678999999987653       


Q ss_pred             HHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCC--CCCeEEEEcCCccccccccc
Q 017812          135 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP--VPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~--~~g~iV~vsS~~~~~~~~~~  212 (365)
                            ..+++|++|||||+.. ..+.+.+++++++++|+.|+++++++++|.|.+++  .++.+++.||.++.      
T Consensus        76 ------~~~~iDilVnnAG~~~-~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~------  142 (245)
T PRK12367         76 ------QLASLDVLILNHGINP-GGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEI------  142 (245)
T ss_pred             ------hcCCCCEEEECCccCC-cCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEeccccc------
Confidence                  2367999999999853 34567899999999999999999999999997631  12345455565544      


Q ss_pred             CCCccccccccccCCCCChhhhhhhhHHHHHHHH---HHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHH
Q 017812          213 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFS---YELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFT  289 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~---~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~  289 (365)
                                    .+ ++...|++||+|+..+.   +.++.|+.   ..+++|++++||+++|++...           
T Consensus       143 --------------~~-~~~~~Y~aSKaal~~~~~l~~~l~~e~~---~~~i~v~~~~pg~~~t~~~~~-----------  193 (245)
T PRK12367        143 --------------QP-ALSPSYEISKRLIGQLVSLKKNLLDKNE---RKKLIIRKLILGPFRSELNPI-----------  193 (245)
T ss_pred             --------------CC-CCCchhHHHHHHHHHHHHHHHHHHHhhc---ccccEEEEecCCCcccccCcc-----------
Confidence                          22 34567999999986554   34444445   789999999999999997321           


Q ss_pred             HHHHhcCCCCHHHHHHHHHHHhcCC
Q 017812          290 VLKLLGLLQSPEKGINSVLDAALAP  314 (365)
Q Consensus       290 ~~~~~~~~~~p~e~A~~i~~~~l~~  314 (365)
                            ...+|+++|+.+++++...
T Consensus       194 ------~~~~~~~vA~~i~~~~~~~  212 (245)
T PRK12367        194 ------GIMSADFVAKQILDQANLG  212 (245)
T ss_pred             ------CCCCHHHHHHHHHHHHhcC
Confidence                  2359999999999766443

>PRK08017 oxidoreductase; Provisional

Probab=99.96  E-value=3.5e-28  Score=219.40  Aligned_cols=216  Identities=26%  Similarity=0.297  Sum_probs=174.2

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhcc
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  139 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~  139 (365)
                      |+++||||+||||+++|++|+++|++|++++|+.++++.+.    .    ..+..+++|++|.+++..+++.+.+.    
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~----~----~~~~~~~~D~~~~~~~~~~~~~i~~~----   70 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMN----S----LGFTGILLDLDDPESVERAADEVIAL----   70 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHH----h----CCCeEEEeecCCHHHHHHHHHHHHHh----
Confidence            68999999999999999999999999999999987765432    1    13678899999999999998887652    


Q ss_pred             CCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcc
Q 017812          140 DMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNET  217 (365)
Q Consensus       140 ~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~  217 (365)
                       ..+++|++|||||...  +..+.+.+++++++++|+.|++.+++.++|.|.+.+ .++||++||..+.           
T Consensus        71 -~~~~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~-----------  137 (256)
T PRK08017         71 -TDNRLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHG-EGRIVMTSSVMGL-----------  137 (256)
T ss_pred             -cCCCCeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CCEEEEEcCcccc-----------
Confidence             2367999999999753  345678899999999999999999999999998876 6899999998877           


Q ss_pred             ccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHH-HHHHHHHhcC
Q 017812          218 ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLM-AFTVLKLLGL  296 (365)
Q Consensus       218 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~-~~~~~~~~~~  296 (365)
                               .+.+....|++||++++.++++++.++.   ..++++++++||.++|++........... ..........
T Consensus       138 ---------~~~~~~~~Y~~sK~~~~~~~~~l~~~~~---~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~  205 (256)
T PRK08017        138 ---------ISTPGRGAYAASKYALEAWSDALRMELR---HSGIKVSLIEPGPIRTRFTDNVNQTQSDKPVENPGIAARF  205 (256)
T ss_pred             ---------cCCCCccHHHHHHHHHHHHHHHHHHHHh---hcCCEEEEEeCCCcccchhhcccchhhccchhhhHHHhhc
Confidence                     6667788999999999999999999987   78999999999999999876532211000 0000001123


Q ss_pred             CCCHHHHHHHHHHHhc
Q 017812          297 LQSPEKGINSVLDAAL  312 (365)
Q Consensus       297 ~~~p~e~A~~i~~~~l  312 (365)
                      +.+|+|+|+.+..++.
T Consensus       206 ~~~~~d~a~~~~~~~~  221 (256)
T PRK08017        206 TLGPEAVVPKLRHALE  221 (256)
T ss_pred             CCCHHHHHHHHHHHHh
Confidence            4799999999996553

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.96  E-value=3.6e-28  Score=214.83  Aligned_cols=210  Identities=21%  Similarity=0.288  Sum_probs=166.3

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhcc
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  139 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~  139 (365)
                      |+++||||++|||++++++|+++|++|++++|+.+..+++.    ..    .+.++.+|+++.++++++++++..     
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~----~~----~~~~~~~D~~~~~~v~~~~~~~~~-----   68 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQ----AL----GAEALALDVADPASVAGLAWKLDG-----   68 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHH----hc----cceEEEecCCCHHHHHHHHHHhcC-----
Confidence            58999999999999999999999999999999987655432    21    346899999999999988776532     


Q ss_pred             CCCCCeeEEEecCCccc----CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCC
Q 017812          140 DMHSSIQLLINNAGILA----TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNN  215 (365)
Q Consensus       140 ~~~~~id~lv~nAG~~~----~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~  215 (365)
                         +++|++|||||...    +..+.+.++++.++++|+.+++.++++++|+|.+.  .|++|++||..+....      
T Consensus        69 ---~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~iv~isS~~~~~~~------  137 (222)
T PRK06953         69 ---EALDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAA--GGVLAVLSSRMGSIGD------  137 (222)
T ss_pred             ---CCCCEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhcc--CCeEEEEcCccccccc------
Confidence               57999999999863    23356899999999999999999999999998664  4899999998765110      


Q ss_pred             ccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhc
Q 017812          216 ETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLG  295 (365)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  295 (365)
                                 .+......|+++|++++++++.++.++     +++++++|+||+++|++.++.+               
T Consensus       138 -----------~~~~~~~~Y~~sK~a~~~~~~~~~~~~-----~~i~v~~v~Pg~i~t~~~~~~~---------------  186 (222)
T PRK06953        138 -----------ATGTTGWLYRASKAALNDALRAASLQA-----RHATCIALHPGWVRTDMGGAQA---------------  186 (222)
T ss_pred             -----------ccCCCccccHHhHHHHHHHHHHHhhhc-----cCcEEEEECCCeeecCCCCCCC---------------
Confidence                       111112369999999999999999875     4799999999999999976421               


Q ss_pred             CCCCHHHHHHHHHHHhcCC-CCCcccEEeCC
Q 017812          296 LLQSPEKGINSVLDAALAP-PETSGVYFFGG  325 (365)
Q Consensus       296 ~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~  325 (365)
                       ..++++.++.++.++... +..+|.||-.+
T Consensus       187 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (222)
T PRK06953        187 -ALDPAQSVAGMRRVIAQATRRDNGRFFQYD  216 (222)
T ss_pred             -CCCHHHHHHHHHHHHHhcCcccCceEEeeC
Confidence             237899998888754433 35677887544

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=99.96  E-value=3.5e-27  Score=198.56  Aligned_cols=238  Identities=15%  Similarity=0.167  Sum_probs=203.6

Q ss_pred             CCCCCEEEEecCC--ChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHH
Q 017812           56 GIKRPVCIVTGAT--SGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  133 (365)
Q Consensus        56 ~~~~k~vlITGas--sGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~  133 (365)
                      .|+||+.||+|-.  ..|+..+|+.|.++|+++.++..++ ++++-.+++.+..+  ...+++||+++.+++++++++++
T Consensus         3 ~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~~--s~~v~~cDV~~d~~i~~~f~~i~   79 (259)
T COG0623           3 LLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEELG--SDLVLPCDVTNDESIDALFATIK   79 (259)
T ss_pred             ccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhcc--CCeEEecCCCCHHHHHHHHHHHH
Confidence            4789999999985  8999999999999999999999987 66666666655432  35789999999999999999999


Q ss_pred             HHHhccCCCCCeeEEEecCCccc------CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccc
Q 017812          134 QWLLDSDMHSSIQLLINNAGILA------TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRN  207 (365)
Q Consensus       134 ~~~~~~~~~~~id~lv~nAG~~~------~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~  207 (365)
                      +      +.+++|.|||+-|...      +..+.+.++|...+++..++...+++++.|.|..   +|.||.++=..+. 
T Consensus        80 ~------~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~---ggSiltLtYlgs~-  149 (259)
T COG0623          80 K------KWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNN---GGSILTLTYLGSE-  149 (259)
T ss_pred             H------hhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCC---CCcEEEEEeccce-
Confidence            9      6789999999999763      3456789999999999999999999999999987   5899999988776 


Q ss_pred             cccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHH
Q 017812          208 VFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMA  287 (365)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~  287 (365)
                                         +..|.+...+.+|++++.-+|.||.++.   +.|||||+|+-|+++|=....+..+.....
T Consensus       150 -------------------r~vPnYNvMGvAKAaLEasvRyLA~dlG---~~gIRVNaISAGPIrTLAasgI~~f~~~l~  207 (259)
T COG0623         150 -------------------RVVPNYNVMGVAKAALEASVRYLAADLG---KEGIRVNAISAGPIRTLAASGIGDFRKMLK  207 (259)
T ss_pred             -------------------eecCCCchhHHHHHHHHHHHHHHHHHhC---ccCeEEeeecccchHHHHhhccccHHHHHH
Confidence                               7778888999999999999999999998   889999999999999988777766554443


Q ss_pred             HH-HHHHhcCCCCHHHHHHHHHHHhcCCCC---CcccEEeCCCCccc
Q 017812          288 FT-VLKLLGLLQSPEKGINSVLDAALAPPE---TSGVYFFGGKGRTV  330 (365)
Q Consensus       288 ~~-~~~~~~~~~~p~e~A~~i~~~~l~~~~---~~G~~~~~~~g~~~  330 (365)
                      .. ...|++|..++|||+++..  +|.|+.   .+|+...+|.|-.+
T Consensus       208 ~~e~~aPl~r~vt~eeVG~tA~--fLlSdLssgiTGei~yVD~G~~i  252 (259)
T COG0623         208 ENEANAPLRRNVTIEEVGNTAA--FLLSDLSSGITGEIIYVDSGYHI  252 (259)
T ss_pred             HHHhhCCccCCCCHHHhhhhHH--HHhcchhcccccceEEEcCCcee
Confidence            32 3458899999999999999  777764   47888888887654

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.96  E-value=1.4e-28  Score=206.74  Aligned_cols=233  Identities=21%  Similarity=0.243  Sum_probs=181.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .++++|+||+|.|||..++..+...+-.....+++....+  .+.++..++ ........|.+...-+.++.+..++   
T Consensus         5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~--~~~L~v~~g-d~~v~~~g~~~e~~~l~al~e~~r~---   78 (253)
T KOG1204|consen    5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE--LEGLKVAYG-DDFVHVVGDITEEQLLGALREAPRK---   78 (253)
T ss_pred             cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc--ccceEEEec-CCcceechHHHHHHHHHHHHhhhhh---
Confidence            5789999999999999999888887754443333332222  222222222 3344455677766666777777776   


Q ss_pred             ccCCCCCeeEEEecCCcccCC-----CCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017812          138 DSDMHSSIQLLINNAGILATS-----SRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~~-----~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~  212 (365)
                         .++..|++|||||..++.     ...+.++|++.+++|+++.+.+.+.++|.+++++..+.+|||||.++.      
T Consensus        79 ---k~gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav------  149 (253)
T KOG1204|consen   79 ---KGGKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAV------  149 (253)
T ss_pred             ---cCCceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhh------
Confidence               778999999999998653     245789999999999999999999999999998545899999999999      


Q ss_pred             CCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh-----HHHHHH
Q 017812          213 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS-----FLSLMA  287 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~-----~~~~~~  287 (365)
                                    .|++.+++||++|+|.++|++.||.|-    +.++++.+++||.|+|+|......     ......
T Consensus       150 --------------~p~~~wa~yc~~KaAr~m~f~~lA~EE----p~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~  211 (253)
T KOG1204|consen  150 --------------RPFSSWAAYCSSKAARNMYFMVLASEE----PFDVRVLNYAPGVVDTQMQVCIRETSRMTPADLKM  211 (253)
T ss_pred             --------------ccccHHHHhhhhHHHHHHHHHHHhhcC----ccceeEEEccCCcccchhHHHHhhccCCCHHHHHH
Confidence                          999999999999999999999999882    249999999999999999754322     223344


Q ss_pred             HHHHHHhcCCCCHHHHHHHHHHHhcCCCCCcccEEe
Q 017812          288 FTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFF  323 (365)
Q Consensus       288 ~~~~~~~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~  323 (365)
                      +..+.-.+++.+|...|+.+..+++.+...+|++..
T Consensus       212 f~el~~~~~ll~~~~~a~~l~~L~e~~~f~sG~~vd  247 (253)
T KOG1204|consen  212 FKELKESGQLLDPQVTAKVLAKLLEKGDFVSGQHVD  247 (253)
T ss_pred             HHHHHhcCCcCChhhHHHHHHHHHHhcCcccccccc
Confidence            555566678899999999999888777788888864

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.95  E-value=1.1e-27  Score=214.50  Aligned_cols=221  Identities=23%  Similarity=0.230  Sum_probs=161.1

Q ss_pred             HHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhccCCCCCeeEEEecCCc
Q 017812           75 AAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI  154 (365)
Q Consensus        75 ~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~~~~~~id~lv~nAG~  154 (365)
                      +|++|+++|++|++++|+.++.+             ...++++|++|.++++++++++.         +++|+||||||+
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~-------------~~~~~~~Dl~~~~~v~~~~~~~~---------~~iD~li~nAG~   58 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMT-------------LDGFIQADLGDPASIDAAVAALP---------GRIDALFNIAGV   58 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhh-------------hhHhhcccCCCHHHHHHHHHHhc---------CCCeEEEECCCC
Confidence            47899999999999999977532             12467899999999999887652         579999999997


Q ss_pred             ccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc-CCCc-----ccc-ccccccCC
Q 017812          155 LATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ-VNNE-----TIT-GKFFLRSK  227 (365)
Q Consensus       155 ~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~-~~~~-----~~~-~~~~~~~~  227 (365)
                      ..      .+.+++++++|+.+++.+++.++|+|.+   .|+||++||.+++...... ...+     ... ...+....
T Consensus        59 ~~------~~~~~~~~~vN~~~~~~l~~~~~~~~~~---~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (241)
T PRK12428         59 PG------TAPVELVARVNFLGLRHLTEALLPRMAP---GGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAH  129 (241)
T ss_pred             CC------CCCHHHhhhhchHHHHHHHHHHHHhccC---CcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhcc
Confidence            52      2358899999999999999999999964   3899999999886321100 0000     000 00000013


Q ss_pred             CCChhhhhhhhHHHHHHHHHHHH-HHhCCCCCCCeEEEEecCCcccCCccccchhHHH-HHHHHHHHHhcCCCCHHHHHH
Q 017812          228 CYPCARIYEYSKLCLLIFSYELH-RNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLS-LMAFTVLKLLGLLQSPEKGIN  305 (365)
Q Consensus       228 ~~~~~~~Y~~sK~a~~~~~~~la-~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~-~~~~~~~~~~~~~~~p~e~A~  305 (365)
                      +.++...|++||+|+++++++++ .|+.   +.||+||+|+||++.|+|.++...... ........|++++.+|+|+|+
T Consensus       130 ~~~~~~~Y~~sK~a~~~~~~~la~~e~~---~~girvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~  206 (241)
T PRK12428        130 PVALATGYQLSKEALILWTMRQAQPWFG---ARGIRVNCVAPGPVFTPILGDFRSMLGQERVDSDAKRMGRPATADEQAA  206 (241)
T ss_pred             CCCcccHHHHHHHHHHHHHHHHHHHhhh---ccCeEEEEeecCCccCcccccchhhhhhHhhhhcccccCCCCCHHHHHH
Confidence            56778899999999999999999 9997   789999999999999999765432111 001112346778899999999


Q ss_pred             HHHHHhcCC-CCCcccEEeCCCCcc
Q 017812          306 SVLDAALAP-PETSGVYFFGGKGRT  329 (365)
Q Consensus       306 ~i~~~~l~~-~~~~G~~~~~~~g~~  329 (365)
                      .+++++... ...+|+.+..++|..
T Consensus       207 ~~~~l~s~~~~~~~G~~i~vdgg~~  231 (241)
T PRK12428        207 VLVFLCSDAARWINGVNLPVDGGLA  231 (241)
T ss_pred             HHHHHcChhhcCccCcEEEecCchH
Confidence            999644211 245788888887754

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.95  E-value=2.5e-26  Score=217.58  Aligned_cols=196  Identities=22%  Similarity=0.229  Sum_probs=150.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      .++||+++|||||||||+++|++|+++|++|++++|+.+++++...   ..  ...+..+.+|++|.+++.+.       
T Consensus       175 sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~---~~--~~~v~~v~~Dvsd~~~v~~~-------  242 (406)
T PRK07424        175 SLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEIN---GE--DLPVKTLHWQVGQEAALAEL-------  242 (406)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh---hc--CCCeEEEEeeCCCHHHHHHH-------
Confidence            3679999999999999999999999999999999998776543221   11  23467889999998876543       


Q ss_pred             HhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCC---CCeEEEEcCCccccccccc
Q 017812          136 LLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPV---PSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~---~g~iV~vsS~~~~~~~~~~  212 (365)
                            .+++|++|||||+.. ..+.+.+++++++++|+.|++.++++++|.|++++.   .+.+|++|| ++.      
T Consensus       243 ------l~~IDiLInnAGi~~-~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ss-a~~------  308 (406)
T PRK07424        243 ------LEKVDILIINHGINV-HGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSE-AEV------  308 (406)
T ss_pred             ------hCCCCEEEECCCcCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcc-ccc------
Confidence                  246999999999853 346788999999999999999999999999987641   234566654 332      


Q ss_pred             CCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHH
Q 017812          213 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLK  292 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~  292 (365)
                                     ..+..+.|++||+|+..++. ++++     ..++.+..+.||.++|++...              
T Consensus       309 ---------------~~~~~~~Y~ASKaAl~~l~~-l~~~-----~~~~~I~~i~~gp~~t~~~~~--------------  353 (406)
T PRK07424        309 ---------------NPAFSPLYELSKRALGDLVT-LRRL-----DAPCVVRKLILGPFKSNLNPI--------------  353 (406)
T ss_pred             ---------------cCCCchHHHHHHHHHHHHHH-HHHh-----CCCCceEEEEeCCCcCCCCcC--------------
Confidence                           22345689999999999974 5544     245777788899999987421              


Q ss_pred             HhcCCCCHHHHHHHHHHHhcCCC
Q 017812          293 LLGLLQSPEKGINSVLDAALAPP  315 (365)
Q Consensus       293 ~~~~~~~p~e~A~~i~~~~l~~~  315 (365)
                         ...+||++|+.+++++..+.
T Consensus       354 ---~~~spe~vA~~il~~i~~~~  373 (406)
T PRK07424        354 ---GVMSADWVAKQILKLAKRDF  373 (406)
T ss_pred             ---CCCCHHHHHHHHHHHHHCCC
Confidence               23599999999997664433

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.95  E-value=1.2e-26  Score=197.40  Aligned_cols=237  Identities=26%  Similarity=0.374  Sum_probs=192.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCC-----CEEEEEecCchhHHHHHHHHHhhcC--CCceEEEEecCCChhhHHHHHHH
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREG-----FHVVLVGRSSHLLSETMADITSRNK--DARLEAFQVDLSSFQSVLKFKDS  131 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G-----~~Vil~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dls~~~~v~~~~~~  131 (365)
                      .|+++|||++||||.+++.+|.+..     .+|+++||+.++++++.+.+++.+|  ..++.++++|+|+..++.++..+
T Consensus         3 RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~d   82 (341)
T KOG1478|consen    3 RKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKD   82 (341)
T ss_pred             ceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHH
Confidence            5899999999999999999998774     3688999999999999999999998  56789999999999999999999


Q ss_pred             HHHHHhccCCCCCeeEEEecCCcccC-----------------------C------CCCCHHHHhHhHHHHhHHHHHHHH
Q 017812          132 LQQWLLDSDMHSSIQLLINNAGILAT-----------------------S------SRLTPEGYDQMMSTNYIGAFFLTK  182 (365)
Q Consensus       132 ~~~~~~~~~~~~~id~lv~nAG~~~~-----------------------~------~~~~~~~~~~~~~vN~~~~~~l~~  182 (365)
                      +++      .+.++|.+..|||++..                       .      ...+.|++..+|+.|++|+|.+.+
T Consensus        83 i~~------rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~  156 (341)
T KOG1478|consen   83 IKQ------RFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIR  156 (341)
T ss_pred             HHH------HhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHh
Confidence            999      66889999999997521                       0      123678999999999999999999


Q ss_pred             HHhHhhhcCCCCCeEEEEcCCcccccccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeE
Q 017812          183 LLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVS  262 (365)
Q Consensus       183 ~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~  262 (365)
                      .+.|.+..+. ...+|++||..+.   +..++.+++        .-..+..+|+.||.+.+.+.-++.+.+.   +.|+.
T Consensus       157 ~l~pll~~~~-~~~lvwtSS~~a~---kk~lsleD~--------q~~kg~~pY~sSKrl~DlLh~A~~~~~~---~~g~~  221 (341)
T KOG1478|consen  157 ELEPLLCHSD-NPQLVWTSSRMAR---KKNLSLEDF--------QHSKGKEPYSSSKRLTDLLHVALNRNFK---PLGIN  221 (341)
T ss_pred             hhhhHhhcCC-CCeEEEEeecccc---cccCCHHHH--------hhhcCCCCcchhHHHHHHHHHHHhcccc---ccchh
Confidence            9999998876 3499999998875   223333332        3455667899999999999999999887   78999


Q ss_pred             EEEecCCcccCCccccchhHHHHHHHH----HHHHhcC---CCCHHHHHHHHHHHhcCCCC
Q 017812          263 VIAADPGVVKTNIMREVPSFLSLMAFT----VLKLLGL---LQSPEKGINSVLDAALAPPE  316 (365)
Q Consensus       263 v~~v~PG~v~T~~~~~~~~~~~~~~~~----~~~~~~~---~~~p~e~A~~i~~~~l~~~~  316 (365)
                      -++++||...|.+......+...+.+.    ....++.   -.+|-.+|.+.+|.++..+.
T Consensus       222 qyvv~pg~~tt~~~~~~l~~~~~~~~~~~fyl~rllgspwh~id~y~aa~A~vw~~l~~p~  282 (341)
T KOG1478|consen  222 QYVVQPGIFTTNSFSEYLNPFTYFGMLCGFYLARLLGSPWHNIDPYKAANAPVWVTLANPN  282 (341)
T ss_pred             hhcccCceeecchhhhhhhhHHHHHHHHHHHHHHHhcCcccccCccccccchhhhhhcCcc
Confidence            999999999999987764443333221    1122221   14788899999999988764

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.95  E-value=3.6e-26  Score=202.40  Aligned_cols=206  Identities=25%  Similarity=0.328  Sum_probs=166.8

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhc
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  138 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~  138 (365)
                      .|+++||||+|+||++++++|+++ ++|++++|+.++.++..++.      ..++++++|++|.+++++++++       
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~-------   68 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAEL------PGATPFPVDLTDPEAIAAAVEQ-------   68 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh------ccceEEecCCCCHHHHHHHHHh-------
Confidence            578999999999999999999999 99999999987665544332      2478899999999998887653       


Q ss_pred             cCCCCCeeEEEecCCcccC--CCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017812          139 SDMHSSIQLLINNAGILAT--SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  216 (365)
Q Consensus       139 ~~~~~~id~lv~nAG~~~~--~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~  216 (365)
                         .+++|++||+||....  ....+.+++++.+++|+.+++.+++.+++.++++.  +++|++||..+.          
T Consensus        69 ---~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~v~~ss~~~~----------  133 (227)
T PRK08219         69 ---LGRLDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAH--GHVVFINSGAGL----------  133 (227)
T ss_pred             ---cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC--CeEEEEcchHhc----------
Confidence               2469999999998643  34567899999999999999999999999998764  899999998877          


Q ss_pred             cccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhcC
Q 017812          217 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGL  296 (365)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  296 (365)
                                .+.++...|+.+|++++.+++.++.++.   .. +++++++||.++|++.........     ...+.++
T Consensus       134 ----------~~~~~~~~y~~~K~a~~~~~~~~~~~~~---~~-i~~~~i~pg~~~~~~~~~~~~~~~-----~~~~~~~  194 (227)
T PRK08219        134 ----------RANPGWGSYAASKFALRALADALREEEP---GN-VRVTSVHPGRTDTDMQRGLVAQEG-----GEYDPER  194 (227)
T ss_pred             ----------CcCCCCchHHHHHHHHHHHHHHHHHHhc---CC-ceEEEEecCCccchHhhhhhhhhc-----cccCCCC
Confidence                      5666778999999999999999998875   44 999999999999886543321110     0112235


Q ss_pred             CCCHHHHHHHHHHHhc
Q 017812          297 LQSPEKGINSVLDAAL  312 (365)
Q Consensus       297 ~~~p~e~A~~i~~~~l  312 (365)
                      +.+++|+|+.++.++.
T Consensus       195 ~~~~~dva~~~~~~l~  210 (227)
T PRK08219        195 YLRPETVAKAVRFAVD  210 (227)
T ss_pred             CCCHHHHHHHHHHHHc
Confidence            6799999999996553

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.92  E-value=7.1e-24  Score=235.34  Aligned_cols=181  Identities=22%  Similarity=0.195  Sum_probs=154.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHC-CCEEEEEecCc-------------------------------------------
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSRE-GFHVVLVGRSS-------------------------------------------   93 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~-G~~Vil~~r~~-------------------------------------------   93 (365)
                      +|+++|||||++|||.++|++|+++ |++|++++|+.                                           
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence            5899999999999999999999998 69999999982                                           


Q ss_pred             ----hhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhccCCCCCeeEEEecCCccc--CCCCCCHHHHh
Q 017812           94 ----HLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYD  167 (365)
Q Consensus        94 ----~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~  167 (365)
                          ....+..+++.+.  +.++.++.||++|.++++++++++.+      . ++||+||||||+..  ...+.+.++|+
T Consensus      2076 ~~~~~ei~~~la~l~~~--G~~v~y~~~DVtD~~av~~av~~v~~------~-g~IDgVVhnAGv~~~~~i~~~t~e~f~ 2146 (2582)
T TIGR02813      2076 VLSSLEIAQALAAFKAA--GASAEYASADVTNSVSVAATVQPLNK------T-LQITGIIHGAGVLADKHIQDKTLEEFN 2146 (2582)
T ss_pred             cchhHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHH------h-CCCcEEEECCccCCCCCcccCCHHHHH
Confidence                0111222233222  56789999999999999999999876      3 57999999999874  34577999999


Q ss_pred             HhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHH
Q 017812          168 QMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSY  247 (365)
Q Consensus       168 ~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~  247 (365)
                      ++|++|+.|.+.+++++.+.+     .++||++||.++.                    .+.+++..|+++|++++.+++
T Consensus      2147 ~v~~~nv~G~~~Ll~al~~~~-----~~~IV~~SSvag~--------------------~G~~gqs~YaaAkaaL~~la~ 2201 (2582)
T TIGR02813      2147 AVYGTKVDGLLSLLAALNAEN-----IKLLALFSSAAGF--------------------YGNTGQSDYAMSNDILNKAAL 2201 (2582)
T ss_pred             HHHHHHHHHHHHHHHHHHHhC-----CCeEEEEechhhc--------------------CCCCCcHHHHHHHHHHHHHHH
Confidence            999999999999999987764     3589999999998                    788899999999999999999


Q ss_pred             HHHHHhCCCCCCCeEEEEecCCcccCCccc
Q 017812          248 ELHRNLGLDKSRHVSVIAADPGVVKTNIMR  277 (365)
Q Consensus       248 ~la~e~~~~~~~gi~v~~v~PG~v~T~~~~  277 (365)
                      .++.++     ++++|++|+||+++|+|..
T Consensus      2202 ~la~~~-----~~irV~sI~wG~wdtgm~~ 2226 (2582)
T TIGR02813      2202 QLKALN-----PSAKVMSFNWGPWDGGMVN 2226 (2582)
T ss_pred             HHHHHc-----CCcEEEEEECCeecCCccc
Confidence            999985     3699999999999999864

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.90  E-value=1.5e-22  Score=171.49  Aligned_cols=173  Identities=21%  Similarity=0.267  Sum_probs=143.0

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHH---HHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSET---MADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~---~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      ++++||||++|||++++++|+++|+ .|++++|+.+..+..   .+++++.  +.++.++.+|+++++++.++++++.+ 
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~-   77 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEAL--GAEVTVVACDVADRAALAAALAAIPA-   77 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHH-
Confidence            5799999999999999999999997 788889986554332   2344333  45788999999999999999998877 


Q ss_pred             HhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                           .++++|++|||||+..  +....+.++++.++++|+.+++.+++.+.+    .+ .+++|++||..+.       
T Consensus        78 -----~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~ii~~ss~~~~-------  140 (180)
T smart00822       78 -----RLGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRD----LP-LDFFVLFSSVAGV-------  140 (180)
T ss_pred             -----HcCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhcc----CC-cceEEEEccHHHh-------
Confidence                 5688999999999863  345668899999999999999999998843    22 5899999999877       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCccc
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVK  272 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~  272 (365)
                                   .+.++...|+++|+++..+++.++       ..++.+.++.||++.
T Consensus       141 -------------~~~~~~~~y~~sk~~~~~~~~~~~-------~~~~~~~~~~~g~~~  179 (180)
T smart00822      141 -------------LGNPGQANYAAANAFLDALAAHRR-------ARGLPATSINWGAWA  179 (180)
T ss_pred             -------------cCCCCchhhHHHHHHHHHHHHHHH-------hcCCceEEEeecccc
Confidence                         666788899999999999997765       457789999999875

It uses NADPH to reduce the keto group to a hydroxy group.

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.90  E-value=1.7e-21  Score=179.80  Aligned_cols=255  Identities=14%  Similarity=0.042  Sum_probs=175.4

Q ss_pred             CCCEEEEecCCChHHHH--HHHHHHHCCCEEEEEecCchhH------------HHHHHHHHhhcCCCceEEEEecCCChh
Q 017812           58 KRPVCIVTGATSGLGAA--AAYALSREGFHVVLVGRSSHLL------------SETMADITSRNKDARLEAFQVDLSSFQ  123 (365)
Q Consensus        58 ~~k~vlITGassGIG~~--~a~~la~~G~~Vil~~r~~~~~------------~~~~~~l~~~~~~~~~~~~~~Dls~~~  123 (365)
                      .+|++||||||+|||.+  +|+.| +.|++|+++++..+..            +.+.+.+.+.  +..+..+.||+++.+
T Consensus        40 ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~--G~~a~~i~~DVss~E  116 (398)
T PRK13656         40 GPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAA--GLYAKSINGDAFSDE  116 (398)
T ss_pred             CCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhc--CCceEEEEcCCCCHH
Confidence            47999999999999999  89999 9999999988643221            1233344332  446778999999999


Q ss_pred             hHHHHHHHHHHHHhccCCCCCeeEEEecCCcccCCC------------------------------------CCCHHHHh
Q 017812          124 SVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS------------------------------------RLTPEGYD  167 (365)
Q Consensus       124 ~v~~~~~~~~~~~~~~~~~~~id~lv~nAG~~~~~~------------------------------------~~~~~~~~  167 (365)
                      +++++++++.+      .+|+||+||||+|......                                    ..+.++++
T Consensus       117 ~v~~lie~I~e------~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~  190 (398)
T PRK13656        117 IKQKVIELIKQ------DLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIA  190 (398)
T ss_pred             HHHHHHHHHHH------hcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHH
Confidence            99999999998      6689999999999762211                                    13445555


Q ss_pred             HhHHHHhH-HHHHH--HHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCccccccccccCCCCChh--hhhhhhHHHH
Q 017812          168 QMMSTNYI-GAFFL--TKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCA--RIYEYSKLCL  242 (365)
Q Consensus       168 ~~~~vN~~-~~~~l--~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~~sK~a~  242 (365)
                      .+++|.-- .-...  .+...+.|.+   ++++|..|+....                    ...|.+  ..-+.+|+++
T Consensus       191 ~Tv~vMggedw~~Wi~al~~a~lla~---g~~~va~TY~G~~--------------------~t~p~Y~~g~mG~AKa~L  247 (398)
T PRK13656        191 DTVKVMGGEDWELWIDALDEAGVLAE---GAKTVAYSYIGPE--------------------LTHPIYWDGTIGKAKKDL  247 (398)
T ss_pred             HHHHhhccchHHHHHHHHHhcccccC---CcEEEEEecCCcc--------------------eeecccCCchHHHHHHHH
Confidence            55444322 11222  3444455543   5899999998876                    455555  4779999999


Q ss_pred             HHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhcCCCCCcccEE
Q 017812          243 LIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYF  322 (365)
Q Consensus       243 ~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~A~~i~~~~l~~~~~~G~~~  322 (365)
                      +.-++.|+.+++   +.||++|++.+|.+.|.....+|.+..+..... ..++.-.+-|.+.+.+.++|...-...|..-
T Consensus       248 E~~~r~La~~L~---~~giran~i~~g~~~T~Ass~Ip~~~ly~~~l~-kvmk~~g~he~~ieq~~rl~~~~ly~~~~~~  323 (398)
T PRK13656        248 DRTALALNEKLA---AKGGDAYVSVLKAVVTQASSAIPVMPLYISLLF-KVMKEKGTHEGCIEQIYRLFSERLYRDGAIP  323 (398)
T ss_pred             HHHHHHHHHHhh---hcCCEEEEEecCcccchhhhcCCCcHHHHHHHH-HHHHhcCCCCChHHHHHHHHHHhcccCCCCC
Confidence            999999999998   889999999999999999988887665544332 2333334666677777766644322112221


Q ss_pred             eCCCCccccCCcccCCHHHHH---HHHHH
Q 017812          323 FGGKGRTVNSSALSFNSKLAG---ELWTT  348 (365)
Q Consensus       323 ~~~~g~~~~~~~~~~d~~~~~---~lw~~  348 (365)
                      ..|+..-+...+...+++.|.   .+|+.
T Consensus       324 ~~d~~~r~r~d~~el~~~vq~~v~~~~~~  352 (398)
T PRK13656        324 EVDEEGRLRLDDWELRPDVQAAVRELWPQ  352 (398)
T ss_pred             CcCCcCCcccchhhcCHHHHHHHHHHHHH
Confidence            123333455666666777664   45544

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.90  E-value=3.4e-22  Score=193.78  Aligned_cols=221  Identities=15%  Similarity=0.086  Sum_probs=159.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhh-----c--CCCceEEEEecCCChhhHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSR-----N--KDARLEAFQVDLSSFQSVLKF  128 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~-----~--~~~~~~~~~~Dls~~~~v~~~  128 (365)
                      ..+||+++||||+||||++++++|+++|++|++++|+.++++.+.+++.+.     +  ...++.++.+|++|.+++.+.
T Consensus        77 ~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~a  156 (576)
T PLN03209         77 TKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPA  156 (576)
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHH
Confidence            357999999999999999999999999999999999999888777665431     1  123588999999998887542


Q ss_pred             HHHHHHHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccc
Q 017812          129 KDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNV  208 (365)
Q Consensus       129 ~~~~~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~  208 (365)
                                   .+++|+||||||....    ...++...+++|+.|+.++++++.+.    + .+|||++||.++.. 
T Consensus       157 -------------LggiDiVVn~AG~~~~----~v~d~~~~~~VN~~Gt~nLl~Aa~~a----g-VgRIV~VSSiga~~-  213 (576)
T PLN03209        157 -------------LGNASVVICCIGASEK----EVFDVTGPYRIDYLATKNLVDAATVA----K-VNHFILVTSLGTNK-  213 (576)
T ss_pred             -------------hcCCCEEEEccccccc----cccchhhHHHHHHHHHHHHHHHHHHh----C-CCEEEEEccchhcc-
Confidence                         2569999999997532    12246778999999999999988653    2 47999999987530 


Q ss_pred             ccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHH
Q 017812          209 FNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAF  288 (365)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~  288 (365)
                                        .+.+.. .|. +|+++..+.+.+..++.   ..||+++.|+||++.|++...... ......
T Consensus       214 ------------------~g~p~~-~~~-sk~~~~~~KraaE~~L~---~sGIrvTIVRPG~L~tp~d~~~~t-~~v~~~  269 (576)
T PLN03209        214 ------------------VGFPAA-ILN-LFWGVLCWKRKAEEALI---ASGLPYTIVRPGGMERPTDAYKET-HNLTLS  269 (576)
T ss_pred             ------------------cCcccc-chh-hHHHHHHHHHHHHHHHH---HcCCCEEEEECCeecCCccccccc-cceeec
Confidence                              111111 243 77888788888888887   789999999999999886442100 000000


Q ss_pred             HHHHHhcCCCCHHHHHHHHHHHhcCCCCCcccEEe
Q 017812          289 TVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFF  323 (365)
Q Consensus       289 ~~~~~~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~  323 (365)
                      ....++++..+++|+|+.+++++...+...+..+.
T Consensus       270 ~~d~~~gr~isreDVA~vVvfLasd~~as~~kvve  304 (576)
T PLN03209        270 EEDTLFGGQVSNLQVAELMACMAKNRRLSYCKVVE  304 (576)
T ss_pred             cccccCCCccCHHHHHHHHHHHHcCchhccceEEE
Confidence            00124456789999999999555444445566664

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.89  E-value=1.2e-21  Score=182.90  Aligned_cols=215  Identities=18%  Similarity=0.140  Sum_probs=153.9

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCC--CEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREG--FHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G--~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      ++||+++||||+|+||++++++|+++|  ++|++.+|+..+..++.+++    ...++.++.+|++|.+++.++++    
T Consensus         2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~----~~~~~~~v~~Dl~d~~~l~~~~~----   73 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKF----PAPCLRFFIGDVRDKERLTRALR----   73 (324)
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHh----CCCcEEEEEccCCCHHHHHHHHh----
Confidence            468999999999999999999999987  78999999876544433332    13468899999999988776542    


Q ss_pred             HHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017812          135 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  214 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~  214 (365)
                               .+|++||+||.....  ......++++++|+.|+.++++++.+.    + .++||++||....        
T Consensus        74 ---------~iD~Vih~Ag~~~~~--~~~~~~~~~~~~Nv~g~~~ll~aa~~~----~-~~~iV~~SS~~~~--------  129 (324)
T TIGR03589        74 ---------GVDYVVHAAALKQVP--AAEYNPFECIRTNINGAQNVIDAAIDN----G-VKRVVALSTDKAA--------  129 (324)
T ss_pred             ---------cCCEEEECcccCCCc--hhhcCHHHHHHHHHHHHHHHHHHHHHc----C-CCEEEEEeCCCCC--------
Confidence                     389999999975321  112233578999999999999998763    2 4699999996533        


Q ss_pred             CccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHH-HHH
Q 017812          215 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTV-LKL  293 (365)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~-~~~  293 (365)
                                  .   +...|++||++.+.++++++.+.+   ..|+++++++||.|..+-..-++.......... ..+
T Consensus       130 ------------~---p~~~Y~~sK~~~E~l~~~~~~~~~---~~gi~~~~lR~g~v~G~~~~~i~~~~~~~~~~~~~~~  191 (324)
T TIGR03589       130 ------------N---PINLYGATKLASDKLFVAANNISG---SKGTRFSVVRYGNVVGSRGSVVPFFKSLKEEGVTELP  191 (324)
T ss_pred             ------------C---CCCHHHHHHHHHHHHHHHHHhhcc---ccCcEEEEEeecceeCCCCCcHHHHHHHHHhCCCCee
Confidence                        2   246799999999999999988776   789999999999998864221111111110000 001


Q ss_pred             h------cCCCCHHHHHHHHHHHhcCCCCCcccEEe
Q 017812          294 L------GLLQSPEKGINSVLDAALAPPETSGVYFF  323 (365)
Q Consensus       294 ~------~~~~~p~e~A~~i~~~~l~~~~~~G~~~~  323 (365)
                      .      +.+..++|+|++++.++...  ..|..|.
T Consensus       192 i~~~~~~r~~i~v~D~a~a~~~al~~~--~~~~~~~  225 (324)
T TIGR03589       192 ITDPRMTRFWITLEQGVNFVLKSLERM--LGGEIFV  225 (324)
T ss_pred             eCCCCceEeeEEHHHHHHHHHHHHhhC--CCCCEEc
Confidence            1      12468999999999765432  2355554

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.89  E-value=5.2e-21  Score=178.81  Aligned_cols=240  Identities=16%  Similarity=0.176  Sum_probs=158.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .+|++|||||+|+||++++++|+++|++|++++|+.+..++............++.++.+|++|.+++.++++       
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   76 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAID-------   76 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHc-------
Confidence            3789999999999999999999999999999999887654443222211112468899999999988776653       


Q ss_pred             ccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC-CCc
Q 017812          138 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV-NNE  216 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~-~~~  216 (365)
                            ++|++|||||....  ..+.+.+.+.+++|+.|++++++++.+.+.    .++||++||.+++....... +..
T Consensus        77 ------~~d~vih~A~~~~~--~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~----~~~iv~~SS~~~~~~~~~~~~~~~  144 (325)
T PLN02989         77 ------GCETVFHTASPVAI--TVKTDPQVELINPAVNGTINVLRTCTKVSS----VKRVILTSSMAAVLAPETKLGPND  144 (325)
T ss_pred             ------CCCEEEEeCCCCCC--CCCCChHHHHHHHHHHHHHHHHHHHHHcCC----ceEEEEecchhheecCCccCCCCC
Confidence                  38999999997532  334456788999999999999999987642    37999999987653321100 000


Q ss_pred             cccccccc-cCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHH-HHHHH--HHHH
Q 017812          217 TITGKFFL-RSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFL-SLMAF--TVLK  292 (365)
Q Consensus       217 ~~~~~~~~-~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~-~~~~~--~~~~  292 (365)
                      ........ +.........|+.||.+.+.+++.++++      .|+.++.++|+.+..|......... .....  ....
T Consensus       145 ~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~------~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~  218 (325)
T PLN02989        145 VVDETFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKD------NEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKN  218 (325)
T ss_pred             ccCcCCCCchhHhcccccchHHHHHHHHHHHHHHHHH------cCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCC
Confidence            01110000 0000112367999999999999888764      4789999999999887643211111 01100  0001


Q ss_pred             Hh----cCCCCHHHHHHHHHHHhcCCCCCcccEEe
Q 017812          293 LL----GLLQSPEKGINSVLDAALAPPETSGVYFF  323 (365)
Q Consensus       293 ~~----~~~~~p~e~A~~i~~~~l~~~~~~G~~~~  323 (365)
                      +.    +.+..++|+|++++.++.. +...|.|..
T Consensus       219 ~~~~~~r~~i~v~Dva~a~~~~l~~-~~~~~~~ni  252 (325)
T PLN02989        219 PFNTTHHRFVDVRDVALAHVKALET-PSANGRYII  252 (325)
T ss_pred             CCCCcCcCeeEHHHHHHHHHHHhcC-cccCceEEE
Confidence            11    2345689999999965443 334555543

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.87  E-value=2.5e-20  Score=175.91  Aligned_cols=191  Identities=15%  Similarity=0.043  Sum_probs=141.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      ++||+++||||+|+||.+++++|+++|++|++++|+..........+..   ..++.++.+|++|.+++.+++++     
T Consensus         2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~-----   73 (349)
T TIGR02622         2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNL---AKKIEDHFGDIRDAAKLRKAIAE-----   73 (349)
T ss_pred             cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhh---cCCceEEEccCCCHHHHHHHHhh-----
Confidence            3578999999999999999999999999999999987654443333321   23577899999999998887764     


Q ss_pred             hccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017812          137 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  216 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~  216 (365)
                            .++|++||+||...  ...+.++.+..+++|+.+++.+++++.+.   . ..+++|++||...+........  
T Consensus        74 ------~~~d~vih~A~~~~--~~~~~~~~~~~~~~N~~g~~~ll~a~~~~---~-~~~~iv~~SS~~vyg~~~~~~~--  139 (349)
T TIGR02622        74 ------FKPEIVFHLAAQPL--VRKSYADPLETFETNVMGTVNLLEAIRAI---G-SVKAVVNVTSDKCYRNDEWVWG--  139 (349)
T ss_pred             ------cCCCEEEECCcccc--cccchhCHHHHHHHhHHHHHHHHHHHHhc---C-CCCEEEEEechhhhCCCCCCCC--
Confidence                  24899999999642  23455667789999999999999987432   1 1369999999876632211000  


Q ss_pred             cccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCC-CCCCeEEEEecCCcccCCc
Q 017812          217 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLD-KSRHVSVIAADPGVVKTNI  275 (365)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~-~~~gi~v~~v~PG~v~T~~  275 (365)
                            +.+..+..+...|+.||++.+.+++.++.++... ..+|+++++++|+.+..|-
T Consensus       140 ------~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~  193 (349)
T TIGR02622       140 ------YRETDPLGGHDPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGG  193 (349)
T ss_pred             ------CccCCCCCCCCcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCC
Confidence                  1111344556789999999999999999887410 0048999999999998774

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.87  E-value=6.4e-21  Score=179.35  Aligned_cols=249  Identities=13%  Similarity=0.066  Sum_probs=158.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHH-HHHHHHHh-h-cCCCceEEEEecCCChhhHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLS-ETMADITS-R-NKDARLEAFQVDLSSFQSVLKFKDSL  132 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~-~~~~~l~~-~-~~~~~~~~~~~Dls~~~~v~~~~~~~  132 (365)
                      +.++|+||||||+|+||.+++++|+++|++|++++|+.+... ...+.+.. . ..+.++.++.+|++|.+++.++++.+
T Consensus         3 ~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   82 (340)
T PLN02653          3 DPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDI   82 (340)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHc
Confidence            467899999999999999999999999999999998754311 11122211 1 11346889999999999988877642


Q ss_pred             HHHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017812          133 QQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       133 ~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~  212 (365)
                                 .+|+|||+||.....  ...+..+..+++|+.|+..+++++.+.+.+++..-++|++||.+.+......
T Consensus        83 -----------~~d~Vih~A~~~~~~--~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~~  149 (340)
T PLN02653         83 -----------KPDEVYNLAAQSHVA--VSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPPP  149 (340)
T ss_pred             -----------CCCEEEECCcccchh--hhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCCC
Confidence                       389999999975321  2234457788999999999999999887543212378999987655332211


Q ss_pred             CCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHH-HH
Q 017812          213 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFT-VL  291 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~-~~  291 (365)
                      .          .+..+..+...|+.||++.+.+++.++.++...-..++.++.+.||.-.+.+...+.......... ..
T Consensus       150 ~----------~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~  219 (340)
T PLN02653        150 Q----------SETTPFHPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQK  219 (340)
T ss_pred             C----------CCCCCCCCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCC
Confidence            1          112445567789999999999999998876411113444555666643321111111000000000 00


Q ss_pred             -------HHhcCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017812          292 -------KLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  330 (365)
Q Consensus       292 -------~~~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~  330 (365)
                             ...+-+...+|+|++++.++.. + ..|. |....|+++
T Consensus       220 ~~~~g~g~~~rd~i~v~D~a~a~~~~~~~-~-~~~~-yni~~g~~~  262 (340)
T PLN02653        220 KLFLGNLDASRDWGFAGDYVEAMWLMLQQ-E-KPDD-YVVATEESH  262 (340)
T ss_pred             ceEeCCCcceecceeHHHHHHHHHHHHhc-C-CCCc-EEecCCCce
Confidence                   0011346899999999965543 2 2344 555666666

>PLN02583 cinnamoyl-CoA reductase

Probab=99.86  E-value=5.6e-20  Score=169.60  Aligned_cols=237  Identities=13%  Similarity=0.103  Sum_probs=151.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchh--HHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHL--LSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~--~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      .+|+|+||||+|+||++++++|+++|++|+++.|+.+.  ..+....+...  +.++.++.+|++|.+++.+.+      
T Consensus         5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~d~~~~~~~l------   76 (297)
T PLN02583          5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCE--EERLKVFDVDPLDYHSILDAL------   76 (297)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccC--CCceEEEEecCCCHHHHHHHH------
Confidence            46899999999999999999999999999999996432  22223333211  346888999999998875543      


Q ss_pred             HhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccc-cccCC
Q 017812          136 LLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVF-NAQVN  214 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~-~~~~~  214 (365)
                             ..+|.++|.++....   . ...+++++++|+.|++++++++.+.+.    .+|||++||.++.... ....+
T Consensus        77 -------~~~d~v~~~~~~~~~---~-~~~~~~~~~~nv~gt~~ll~aa~~~~~----v~riV~~SS~~a~~~~~~~~~~  141 (297)
T PLN02583         77 -------KGCSGLFCCFDPPSD---Y-PSYDEKMVDVEVRAAHNVLEACAQTDT----IEKVVFTSSLTAVIWRDDNIST  141 (297)
T ss_pred             -------cCCCEEEEeCccCCc---c-cccHHHHHHHHHHHHHHHHHHHHhcCC----ccEEEEecchHheecccccCCC
Confidence                   237888887654321   1 124678999999999999999987641    3699999998765311 11001


Q ss_pred             Ccccccccccc-CCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017812          215 NETITGKFFLR-SKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  293 (365)
Q Consensus       215 ~~~~~~~~~~~-~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  293 (365)
                      ....+...+.. .........|+.||...+.++..++++      .|+.+++++|+.|.+|...................
T Consensus       142 ~~~~~E~~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~------~gi~~v~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~  215 (297)
T PLN02583        142 QKDVDERSWSDQNFCRKFKLWHALAKTLSEKTAWALAMD------RGVNMVSINAGLLMGPSLTQHNPYLKGAAQMYENG  215 (297)
T ss_pred             CCCCCcccCCCHHHHhhcccHHHHHHHHHHHHHHHHHHH------hCCcEEEEcCCcccCCCCCCchhhhcCCcccCccc
Confidence            00111110000 000011236999999999988877653      48999999999998886432111000000000000


Q ss_pred             hcCCCCHHHHHHHHHHHhcCCCCCcccEEeC
Q 017812          294 LGLLQSPEKGINSVLDAALAPPETSGVYFFG  324 (365)
Q Consensus       294 ~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~  324 (365)
                      ...+..++|+|++++.++ ..+...|.|+..
T Consensus       216 ~~~~v~V~Dva~a~~~al-~~~~~~~r~~~~  245 (297)
T PLN02583        216 VLVTVDVNFLVDAHIRAF-EDVSSYGRYLCF  245 (297)
T ss_pred             CcceEEHHHHHHHHHHHh-cCcccCCcEEEe
Confidence            112568999999999655 445666776653

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.85  E-value=3.1e-19  Score=166.63  Aligned_cols=240  Identities=15%  Similarity=0.173  Sum_probs=154.6

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      -+|++++||||+|+||.+++++|+++|++|+++.|+.+..+...+.........++.++.+|++|.+++.++++      
T Consensus         3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   76 (322)
T PLN02986          3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIE------   76 (322)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHh------
Confidence            35899999999999999999999999999999999877654433322211113468889999999988766653      


Q ss_pred             hccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCC-
Q 017812          137 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNN-  215 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~-  215 (365)
                             .+|++||+||......   .+..++.+++|+.|+..+++++....   + .+|||++||.++.......... 
T Consensus        77 -------~~d~vih~A~~~~~~~---~~~~~~~~~~nv~gt~~ll~~~~~~~---~-v~rvV~~SS~~~~~~~~~~~~~~  142 (322)
T PLN02986         77 -------GCDAVFHTASPVFFTV---KDPQTELIDPALKGTINVLNTCKETP---S-VKRVILTSSTAAVLFRQPPIEAN  142 (322)
T ss_pred             -------CCCEEEEeCCCcCCCC---CCchhhhhHHHHHHHHHHHHHHHhcC---C-ccEEEEecchhheecCCccCCCC
Confidence                   3899999999743211   12335689999999999999875431   1 3699999998764211111100 


Q ss_pred             cccccccccc-CCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh-HHHHH-HHHHHH
Q 017812          216 ETITGKFFLR-SKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS-FLSLM-AFTVLK  292 (365)
Q Consensus       216 ~~~~~~~~~~-~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~-~~~~~-~~~~~~  292 (365)
                      ...+...+.. .....+...|+.||.+.+.+++.+.++      .|+.+++++|+.+.+|....... ..... ......
T Consensus       143 ~~~~E~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~------~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~  216 (322)
T PLN02986        143 DVVDETFFSDPSLCRETKNWYPLSKILAENAAWEFAKD------NGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGK  216 (322)
T ss_pred             CCcCcccCCChHHhhccccchHHHHHHHHHHHHHHHHH------hCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCC
Confidence            0111111000 000123467999999999888887654      47999999999999886432110 00000 000000


Q ss_pred             -----HhcCCCCHHHHHHHHHHHhcCCCCCcccEEe
Q 017812          293 -----LLGLLQSPEKGINSVLDAALAPPETSGVYFF  323 (365)
Q Consensus       293 -----~~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~  323 (365)
                           ....+..++|+|++++.++..+ ...|.|..
T Consensus       217 ~~~~~~~~~~v~v~Dva~a~~~al~~~-~~~~~yni  251 (322)
T PLN02986        217 NLFNNRFYRFVDVRDVALAHIKALETP-SANGRYII  251 (322)
T ss_pred             CCCCCcCcceeEHHHHHHHHHHHhcCc-ccCCcEEE
Confidence                 0123568999999999766543 34565544

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.84  E-value=1.7e-19  Score=171.28  Aligned_cols=231  Identities=13%  Similarity=0.134  Sum_probs=187.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      .++||+|+||||+|-||.++++++++.+. ++++.+|++-+...+..++...++..++.++-+|+.|.+.+..+++.   
T Consensus       247 ~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~---  323 (588)
T COG1086         247 MLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEG---  323 (588)
T ss_pred             HcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhc---
Confidence            47899999999999999999999999996 89999999999999999999998888999999999999998887763   


Q ss_pred             HHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017812          135 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  214 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~  214 (365)
                              -++|+++|.|+.-+  ..+-+....+.+++|++|+.++++++...-     -.++|.+|+--+.        
T Consensus       324 --------~kvd~VfHAAA~KH--VPl~E~nP~Eai~tNV~GT~nv~~aa~~~~-----V~~~V~iSTDKAV--------  380 (588)
T COG1086         324 --------HKVDIVFHAAALKH--VPLVEYNPEEAIKTNVLGTENVAEAAIKNG-----VKKFVLISTDKAV--------  380 (588)
T ss_pred             --------CCCceEEEhhhhcc--CcchhcCHHHHHHHhhHhHHHHHHHHHHhC-----CCEEEEEecCccc--------
Confidence                    46999999999632  122344567789999999999999996653     4599999996655        


Q ss_pred             CccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHH-----
Q 017812          215 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFT-----  289 (365)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~-----  289 (365)
                                     .+-+.|++||...+.++.+++.+..   ..+-++.+|+-|.|-..-..-.|-+..+...-     
T Consensus       381 ---------------~PtNvmGaTKr~aE~~~~a~~~~~~---~~~T~f~~VRFGNVlGSrGSViPlFk~QI~~GgplTv  442 (588)
T COG1086         381 ---------------NPTNVMGATKRLAEKLFQAANRNVS---GTGTRFCVVRFGNVLGSRGSVIPLFKKQIAEGGPLTV  442 (588)
T ss_pred             ---------------CCchHhhHHHHHHHHHHHHHhhccC---CCCcEEEEEEecceecCCCCCHHHHHHHHHcCCCccc
Confidence                           4557899999999999999998765   44789999999999776555555554443221     


Q ss_pred             -HHHHhcCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccccC
Q 017812          290 -VLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNS  332 (365)
Q Consensus       290 -~~~~~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~~~  332 (365)
                       .....+++.|..|+++.++.++..  ..+|..|.-|.|+|++.
T Consensus       443 Tdp~mtRyfMTI~EAv~LVlqA~a~--~~gGeifvldMGepvkI  484 (588)
T COG1086         443 TDPDMTRFFMTIPEAVQLVLQAGAI--AKGGEIFVLDMGEPVKI  484 (588)
T ss_pred             cCCCceeEEEEHHHHHHHHHHHHhh--cCCCcEEEEcCCCCeEH
Confidence             111234678999999999976654  55789999999999953

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.84  E-value=3.9e-19  Score=160.46  Aligned_cols=236  Identities=17%  Similarity=0.122  Sum_probs=165.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHH--HHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSET--MADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~--~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      .+++|+||||||.||..++++|.++|+.|..+.|++++.+.+  ..++...  +.+...+..|++|++++++.++     
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a--~~~l~l~~aDL~d~~sf~~ai~-----   77 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGA--KERLKLFKADLLDEGSFDKAID-----   77 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccC--cccceEEeccccccchHHHHHh-----
Confidence            678999999999999999999999999999999999874443  3444322  4569999999999999888764     


Q ss_pred             HhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc---
Q 017812          136 LLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ---  212 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~---  212 (365)
                              ++|+|+|.|.........   .-.+.++.++.|+.++++++...-    .-.|||++||.++.......   
T Consensus        78 --------gcdgVfH~Asp~~~~~~~---~e~~li~pav~Gt~nVL~ac~~~~----sVkrvV~TSS~aAv~~~~~~~~~  142 (327)
T KOG1502|consen   78 --------GCDGVFHTASPVDFDLED---PEKELIDPAVKGTKNVLEACKKTK----SVKRVVYTSSTAAVRYNGPNIGE  142 (327)
T ss_pred             --------CCCEEEEeCccCCCCCCC---cHHhhhhHHHHHHHHHHHHHhccC----CcceEEEeccHHHhccCCcCCCC
Confidence                    499999999875432211   223789999999999999996553    24699999999988654222   


Q ss_pred             ---CCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHH
Q 017812          213 ---VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFT  289 (365)
Q Consensus       213 ---~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~  289 (365)
                         ++...+.+..+....    ...|+.||...+-    .|.+++.  ..++...+|+||+|-.|.....+.........
T Consensus       143 ~~vvdE~~wsd~~~~~~~----~~~Y~~sK~lAEk----aAw~fa~--e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~  212 (327)
T KOG1502|consen  143 NSVVDEESWSDLDFCRCK----KLWYALSKTLAEK----AAWEFAK--ENGLDLVTINPGLVFGPGLQPSLNSSLNALLK  212 (327)
T ss_pred             CcccccccCCcHHHHHhh----HHHHHHHHHHHHH----HHHHHHH--hCCccEEEecCCceECCCcccccchhHHHHHH
Confidence               222223322222211    1679999965544    4455542  45899999999999999876633322222111


Q ss_pred             HHHH--------hcCCCCHHHHHHHHHHHhcCCCCCcccEEeCCC
Q 017812          290 VLKL--------LGLLQSPEKGINSVLDAALAPPETSGVYFFGGK  326 (365)
Q Consensus       290 ~~~~--------~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~  326 (365)
                      ....        ...+.+.+|+|.+.+. ++..+.++|+|+..+.
T Consensus       213 ~i~G~~~~~~n~~~~~VdVrDVA~AHv~-a~E~~~a~GRyic~~~  256 (327)
T KOG1502|consen  213 LIKGLAETYPNFWLAFVDVRDVALAHVL-ALEKPSAKGRYICVGE  256 (327)
T ss_pred             HHhcccccCCCCceeeEeHHHHHHHHHH-HHcCcccCceEEEecC
Confidence            1111        0135799999999995 5566777899987543

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.84  E-value=1.5e-19  Score=154.37  Aligned_cols=171  Identities=23%  Similarity=0.311  Sum_probs=134.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHCCC-EEEEEecCc---hhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           61 VCIVTGATSGLGAAAAYALSREGF-HVVLVGRSS---HLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~---~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      ++|||||.+|||..+++.|+++|+ +|++++|+.   ...++..+++++.  +.++.+++||++|+++++++++++.+  
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~--g~~v~~~~~Dv~d~~~v~~~~~~~~~--   77 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESA--GARVEYVQCDVTDPEAVAAALAQLRQ--   77 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHT--T-EEEEEE--TTSHHHHHHHHHTSHT--
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhC--CCceeeeccCccCHHHHHHHHHHHHh--
Confidence            689999999999999999999996 999999993   3455677777776  67999999999999999999999887  


Q ss_pred             hccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017812          137 LDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  214 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~  214 (365)
                          .+++|+.+||.||...  +..+.+++.++.++..-+.|...+.+.+.+.     ....+|..||+++.        
T Consensus        78 ----~~~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~-----~l~~~i~~SSis~~--------  140 (181)
T PF08659_consen   78 ----RFGPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENR-----PLDFFILFSSISSL--------  140 (181)
T ss_dssp             ----TSS-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTT-----TTSEEEEEEEHHHH--------
T ss_pred             ----ccCCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcC-----CCCeEEEECChhHh--------
Confidence                6689999999999973  4567899999999999999999999988662     14699999999998        


Q ss_pred             CccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcc
Q 017812          215 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVV  271 (365)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v  271 (365)
                                  .+.++++.|+++.+.++.|++..+.       .|..+.+|+-|..
T Consensus       141 ------------~G~~gq~~YaaAN~~lda~a~~~~~-------~g~~~~sI~wg~W  178 (181)
T PF08659_consen  141 ------------LGGPGQSAYAAANAFLDALARQRRS-------RGLPAVSINWGAW  178 (181)
T ss_dssp             ------------TT-TTBHHHHHHHHHHHHHHHHHHH-------TTSEEEEEEE-EB
T ss_pred             ------------ccCcchHhHHHHHHHHHHHHHHHHh-------CCCCEEEEEcccc
Confidence                        8899999999999999999987654       3556777776654

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PLN02650 dihydroflavonol-4-reductase

Probab=99.83  E-value=9.7e-19  Score=165.24  Aligned_cols=236  Identities=16%  Similarity=0.136  Sum_probs=154.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      ..|++|||||+|+||.+++++|+++|++|++++|+.+................++.++.+|++|.+.+.++++       
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~-------   76 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIR-------   76 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHh-------
Confidence            4678999999999999999999999999999999876655443322111112368889999999988766543       


Q ss_pred             ccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc---CC
Q 017812          138 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ---VN  214 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~---~~  214 (365)
                            .+|++||+|+.... .  ..+..+..+++|+.|+.++++++.+...    .++||++||.+.+......   .+
T Consensus        77 ------~~d~ViH~A~~~~~-~--~~~~~~~~~~~Nv~gt~~ll~aa~~~~~----~~r~v~~SS~~~~~~~~~~~~~~~  143 (351)
T PLN02650         77 ------GCTGVFHVATPMDF-E--SKDPENEVIKPTVNGMLSIMKACAKAKT----VRRIVFTSSAGTVNVEEHQKPVYD  143 (351)
T ss_pred             ------CCCEEEEeCCCCCC-C--CCCchhhhhhHHHHHHHHHHHHHHhcCC----ceEEEEecchhhcccCCCCCCccC
Confidence                  38999999986431 1  1223367899999999999999977531    2599999998654221111   11


Q ss_pred             CccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc-hh-HHHHHHHH-HH
Q 017812          215 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV-PS-FLSLMAFT-VL  291 (365)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~-~~-~~~~~~~~-~~  291 (365)
                      +.......+.. .+..+...|+.||.+.+.+++.++++      .|++++.++|+.+.+|..... +. ........ ..
T Consensus       144 E~~~~~~~~~~-~~~~~~~~Y~~sK~~~E~~~~~~~~~------~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~  216 (351)
T PLN02650        144 EDCWSDLDFCR-RKKMTGWMYFVSKTLAEKAAWKYAAE------NGLDFISIIPTLVVGPFISTSMPPSLITALSLITGN  216 (351)
T ss_pred             cccCCchhhhh-ccccccchHHHHHHHHHHHHHHHHHH------cCCeEEEECCCceECCCCCCCCCccHHHHHHHhcCC
Confidence            11100000000 11123458999999999999888764      579999999999998864321 11 11110000 00


Q ss_pred             ------HHhcCCCCHHHHHHHHHHHhcCCCCCcccE
Q 017812          292 ------KLLGLLQSPEKGINSVLDAALAPPETSGVY  321 (365)
Q Consensus       292 ------~~~~~~~~p~e~A~~i~~~~l~~~~~~G~~  321 (365)
                            ...+.+..++|+|++++.++.. +...|.|
T Consensus       217 ~~~~~~~~~r~~v~V~Dva~a~~~~l~~-~~~~~~~  251 (351)
T PLN02650        217 EAHYSIIKQGQFVHLDDLCNAHIFLFEH-PAAEGRY  251 (351)
T ss_pred             ccccCcCCCcceeeHHHHHHHHHHHhcC-cCcCceE
Confidence                  0112467999999999965533 3344555

>PRK06720 hypothetical protein; Provisional

Probab=99.83  E-value=1.9e-19  Score=151.45  Aligned_cols=140  Identities=18%  Similarity=0.182  Sum_probs=115.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      .+++|+++||||++|||+++|+.|+++|++|++++|+.+.++++.+++...  +.+..++++|+++.++++++++++.+ 
T Consensus        13 ~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~v~~~v~~~~~-   89 (169)
T PRK06720         13 KLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNL--GGEALFVSYDMEKQGDWQRVISITLN-   89 (169)
T ss_pred             ccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHH-
Confidence            368999999999999999999999999999999999988888877777644  34677889999999999999999887 


Q ss_pred             HhccCCCCCeeEEEecCCcccCCC---CCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCC------CCCeEEEEcCCccc
Q 017812          136 LLDSDMHSSIQLLINNAGILATSS---RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP------VPSRIVNVTSFTHR  206 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~~~~---~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~------~~g~iV~vsS~~~~  206 (365)
                           .++++|++|||||+.....   +.+.++ ++  .+|+.+++..++.+.++|.+++      ..||+..|||.+..
T Consensus        90 -----~~G~iDilVnnAG~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (169)
T PRK06720         90 -----AFSRIDMLFQNAGLYKIDSIFSRQQEND-SN--VLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQS  161 (169)
T ss_pred             -----HcCCCCEEEECCCcCCCCCcccccchhH-hh--ceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEecccccc
Confidence                 5689999999999864322   223333 33  7788888999999999987764      46899999987654

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.83  E-value=1.1e-18  Score=165.06  Aligned_cols=241  Identities=12%  Similarity=0.073  Sum_probs=156.2

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEE-EEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhc
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGFHVV-LVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  138 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~~Vi-l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~  138 (365)
                      ++++||||+|+||.+++++|.++|++++ +++|.... ... ..+.....+.++.++.+|++|.+++++++++       
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-------   72 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYA-GNL-MSLAPVAQSERFAFEKVDICDRAELARVFTE-------   72 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccc-cch-hhhhhcccCCceEEEECCCcChHHHHHHHhh-------
Confidence            5799999999999999999999998755 45554321 111 1111111234678889999999988777653       


Q ss_pred             cCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhc---C-CCCCeEEEEcCCcccccccccCC
Q 017812          139 SDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKN---S-PVPSRIVNVTSFTHRNVFNAQVN  214 (365)
Q Consensus       139 ~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~---~-~~~g~iV~vsS~~~~~~~~~~~~  214 (365)
                          .++|+|||+||....  ..+.+..+..+++|+.|+..+++++.+.|..   . +...++|++||.+.+....... 
T Consensus        73 ----~~~D~Vih~A~~~~~--~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~-  145 (355)
T PRK10217         73 ----HQPDCVMHLAAESHV--DRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTD-  145 (355)
T ss_pred             ----cCCCEEEECCcccCc--chhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCC-
Confidence                259999999997532  2334567899999999999999999876421   1 1125899999977553211100 


Q ss_pred             CccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc---hhHHHHHHHHHH
Q 017812          215 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV---PSFLSLMAFTVL  291 (365)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~---~~~~~~~~~~~~  291 (365)
                       .     .+.+..+..+.+.|+.||.+.+.+++.+++++      ++.+..+.|+.+-.|-....   +...........
T Consensus       146 -~-----~~~E~~~~~p~s~Y~~sK~~~e~~~~~~~~~~------~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~  213 (355)
T PRK10217        146 -D-----FFTETTPYAPSSPYSASKASSDHLVRAWLRTY------GLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKP  213 (355)
T ss_pred             -C-----CcCCCCCCCCCChhHHHHHHHHHHHHHHHHHh------CCCeEEEeeeeeeCCCCCcccHHHHHHHHHhcCCC
Confidence             0     01111344557789999999999999987754      57788888988876643211   111010000000


Q ss_pred             HH-------hcCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017812          292 KL-------LGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  330 (365)
Q Consensus       292 ~~-------~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~  330 (365)
                      .+       ..-+..++|+|++++.++. .+ ..|..|...+++++
T Consensus       214 ~~~~g~g~~~~~~i~v~D~a~a~~~~~~-~~-~~~~~yni~~~~~~  257 (355)
T PRK10217        214 LPVYGNGQQIRDWLYVEDHARALYCVAT-TG-KVGETYNIGGHNER  257 (355)
T ss_pred             ceEeCCCCeeeCcCcHHHHHHHHHHHHh-cC-CCCCeEEeCCCCcc
Confidence            00       1135789999999886543 33 34667777777776

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.83  E-value=5.7e-19  Score=166.29  Aligned_cols=244  Identities=14%  Similarity=0.093  Sum_probs=150.1

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchh-----HHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHL-----LSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~-----~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      |+||||||+|+||.+++++|+++|++|++++|+.+.     ++.+.+++. ...+..+.++.+|++|.+++.++++.+  
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~l~~~~~~~--   77 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPH-NVNKARMKLHYGDLTDSSNLRRIIDEI--   77 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccc-cccccceeEEEeccCCHHHHHHHHHhC--
Confidence            589999999999999999999999999999998642     221111111 011246889999999999888777642  


Q ss_pred             HHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017812          135 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  214 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~  214 (365)
                               ++|++||+|+.....  .+.+.-+..+++|+.|+..+++++.+.-.+.  ..++|++||.+.+..... .+
T Consensus        78 ---------~~d~ViH~Aa~~~~~--~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~--~~~~v~~SS~~vyg~~~~-~~  143 (343)
T TIGR01472        78 ---------KPTEIYNLAAQSHVK--VSFEIPEYTADVDGIGTLRLLEAVRTLGLIK--SVKFYQASTSELYGKVQE-IP  143 (343)
T ss_pred             ---------CCCEEEECCcccccc--hhhhChHHHHHHHHHHHHHHHHHHHHhCCCc--CeeEEEeccHHhhCCCCC-CC
Confidence                     489999999975432  1222345678899999999999997742221  248999999876632211 00


Q ss_pred             CccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHH----H
Q 017812          215 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFT----V  290 (365)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~----~  290 (365)
                              ..+..+..+.+.|+.||.+.+.+++.+++++...-..++.++...|+.-.+.+.+.+..........    .
T Consensus       144 --------~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (343)
T TIGR01472       144 --------QNETTPFYPRSPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKL  215 (343)
T ss_pred             --------CCCCCCCCCCChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCce
Confidence                    1112445567789999999999999998775311011233344445422111111111110000000    0


Q ss_pred             ----HHHhcCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcccc
Q 017812          291 ----LKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  331 (365)
Q Consensus       291 ----~~~~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~~  331 (365)
                          .....-+...+|+|++++.++.. + ..| .|....|++..
T Consensus       216 ~~g~g~~~rd~i~V~D~a~a~~~~~~~-~-~~~-~yni~~g~~~s  257 (343)
T TIGR01472       216 YLGNLDAKRDWGHAKDYVEAMWLMLQQ-D-KPD-DYVIATGETHS  257 (343)
T ss_pred             eeCCCccccCceeHHHHHHHHHHHHhc-C-CCc-cEEecCCCcee
Confidence                00112346899999999855433 2 234 45556677663

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN02214 cinnamoyl-CoA reductase

Probab=99.82  E-value=4.3e-18  Score=160.13  Aligned_cols=234  Identities=16%  Similarity=0.168  Sum_probs=153.1

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHH-HHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSET-MADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~-~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      .++++++||||+|+||++++++|+++|++|++++|+.+..... ..++..  ...++.++.+|++|.+++.++++     
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~-----   80 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEG--GKERLILCKADLQDYEALKAAID-----   80 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhC--CCCcEEEEecCcCChHHHHHHHh-----
Confidence            4678999999999999999999999999999999987653221 222221  12368889999999888766553     


Q ss_pred             HhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCC
Q 017812          136 LLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNN  215 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~  215 (365)
                              ++|+|||+||...       ++.++.+++|+.|+..+++++...    + .+|||++||.++..........
T Consensus        81 --------~~d~Vih~A~~~~-------~~~~~~~~~nv~gt~~ll~aa~~~----~-v~r~V~~SS~~avyg~~~~~~~  140 (342)
T PLN02214         81 --------GCDGVFHTASPVT-------DDPEQMVEPAVNGAKFVINAAAEA----K-VKRVVITSSIGAVYMDPNRDPE  140 (342)
T ss_pred             --------cCCEEEEecCCCC-------CCHHHHHHHHHHHHHHHHHHHHhc----C-CCEEEEeccceeeeccCCCCCC
Confidence                    3899999999641       235678999999999999998653    2 3699999997644221110000


Q ss_pred             cccccccccc-CCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcccc-chhHHHHH-HH-HHH
Q 017812          216 ETITGKFFLR-SKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE-VPSFLSLM-AF-TVL  291 (365)
Q Consensus       216 ~~~~~~~~~~-~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~-~~~~~~~~-~~-~~~  291 (365)
                      ...+...+.. ..+..+...|+.||.+.+.+++.++++      .|+.++.++|+.|-.|.... ........ .. ...
T Consensus       141 ~~~~E~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~------~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~  214 (342)
T PLN02214        141 AVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKE------KGVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGS  214 (342)
T ss_pred             cccCcccCCChhhccccccHHHHHHHHHHHHHHHHHHH------cCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCC
Confidence            0011110000 012234568999999999999887664      47899999999998775331 11111000 00 000


Q ss_pred             HH-----hcCCCCHHHHHHHHHHHhcCCCCCcccEEeC
Q 017812          292 KL-----LGLLQSPEKGINSVLDAALAPPETSGVYFFG  324 (365)
Q Consensus       292 ~~-----~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~  324 (365)
                      .+     ..-+..++|+|++++.++. .+...|.|+..
T Consensus       215 ~~~~~~~~~~~i~V~Dva~a~~~al~-~~~~~g~yn~~  251 (342)
T PLN02214        215 AKTYANLTQAYVDVRDVALAHVLVYE-APSASGRYLLA  251 (342)
T ss_pred             cccCCCCCcCeeEHHHHHHHHHHHHh-CcccCCcEEEe
Confidence            00     0134579999999996553 34455777653

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.82  E-value=1.3e-18  Score=158.58  Aligned_cols=257  Identities=17%  Similarity=0.107  Sum_probs=173.5

Q ss_pred             EEecCCChHHHHHHHHHHHCC--CEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhccC
Q 017812           63 IVTGATSGLGAAAAYALSREG--FHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  140 (365)
Q Consensus        63 lITGassGIG~~~a~~la~~G--~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~~  140 (365)
                      |||||+|.||.+++++|.++|  ++|.+.++......  ......   .....++++|++|.+++.++++          
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~--~~~~~~---~~~~~~~~~Di~d~~~l~~a~~----------   65 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKF--LKDLQK---SGVKEYIQGDITDPESLEEALE----------   65 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEccccccccc--chhhhc---ccceeEEEeccccHHHHHHHhc----------
Confidence            699999999999999999999  78998888765322  111111   1223399999999999888664          


Q ss_pred             CCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCccccc
Q 017812          141 MHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITG  220 (365)
Q Consensus       141 ~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~~~~  220 (365)
                         .+|++||.|++.....   ....+..+++|+.|+-++++++...    + -.|+|++||.+........   .++..
T Consensus        66 ---g~d~V~H~Aa~~~~~~---~~~~~~~~~vNV~GT~nvl~aa~~~----~-VkrlVytSS~~vv~~~~~~---~~~~~  131 (280)
T PF01073_consen   66 ---GVDVVFHTAAPVPPWG---DYPPEEYYKVNVDGTRNVLEAARKA----G-VKRLVYTSSISVVFDNYKG---DPIIN  131 (280)
T ss_pred             ---CCceEEEeCccccccC---cccHHHHHHHHHHHHHHHHHHHHHc----C-CCEEEEEcCcceeEeccCC---CCccc
Confidence               4899999999864433   3446789999999999999998653    2 4699999999987431111   11110


Q ss_pred             cccccCCCCChhhhhhhhHHHHHHHHHHHHH-HhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHH--HHHhc--
Q 017812          221 KFFLRSKCYPCARIYEYSKLCLLIFSYELHR-NLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTV--LKLLG--  295 (365)
Q Consensus       221 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~-e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~--~~~~~--  295 (365)
                      .......+......|+.||+..+.++..... ++.  +...+..++|+|..|-.|......+.........  ....+  
T Consensus       132 ~dE~~~~~~~~~~~Y~~SK~~AE~~V~~a~~~~~~--~g~~l~t~~lRP~~IyGp~d~~~~~~~~~~~~~g~~~~~~g~~  209 (280)
T PF01073_consen  132 GDEDTPYPSSPLDPYAESKALAEKAVLEANGSELK--NGGRLRTCALRPAGIYGPGDQRLVPRLVKMVRSGLFLFQIGDG  209 (280)
T ss_pred             CCcCCcccccccCchHHHHHHHHHHHHhhcccccc--cccceeEEEEeccEEeCcccccccchhhHHHHhcccceeecCC
Confidence            0001113334677899999999988876553 221  1346999999999998876544322221111111  00111  


Q ss_pred             ----CCCCHHHHHHHHHHHh---cCC---CCCcccEEeCCCCccccCCcccCCHHHHHHHHHHHHHhhhccCCcccc
Q 017812          296 ----LLQSPEKGINSVLDAA---LAP---PETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFINSQLACRD  362 (365)
Q Consensus       296 ----~~~~p~e~A~~i~~~~---l~~---~~~~G~~~~~~~g~~~~~~~~~~d~~~~~~lw~~~~~~~~~~~~~~~~  362 (365)
                          -+..++++|.+.+-++   +.+   +...|+.|+..+++|+.            .+|+....+++..|.....
T Consensus       210 ~~~~~~vyV~NvA~ahvlA~~~L~~~~~~~~~~G~~y~itd~~p~~------------~~~~f~~~~~~~~G~~~~~  274 (280)
T PF01073_consen  210 NNLFDFVYVENVAHAHVLAAQALLEPGKPERVAGQAYFITDGEPVP------------SFWDFMRPLWEALGYPPPK  274 (280)
T ss_pred             CceECcEeHHHHHHHHHHHHHHhccccccccCCCcEEEEECCCccC------------cHHHHHHHHHHHCCCCCCc
Confidence                2457999999987543   222   35689999999999993            3888888888777776654

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.81  E-value=4.9e-18  Score=158.43  Aligned_cols=239  Identities=14%  Similarity=0.140  Sum_probs=151.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      ++|+++||||+|+||++++++|+++|++|++++|+.+................++.++.+|++|.+++..+++       
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVD-------   75 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHc-------
Confidence            4689999999999999999999999999999999876533322211111112478899999999887766543       


Q ss_pred             ccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC-CCc
Q 017812          138 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV-NNE  216 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~-~~~  216 (365)
                            .+|++||+|+......   .+..+..+++|+.|+..+++++....   + ..+||++||.++..-..... +..
T Consensus        76 ------~~d~Vih~A~~~~~~~---~~~~~~~~~~nv~gt~~ll~a~~~~~---~-~~~~v~~SS~~~~~y~~~~~~~~~  142 (322)
T PLN02662         76 ------GCEGVFHTASPFYHDV---TDPQAELIDPAVKGTLNVLRSCAKVP---S-VKRVVVTSSMAAVAYNGKPLTPDV  142 (322)
T ss_pred             ------CCCEEEEeCCcccCCC---CChHHHHHHHHHHHHHHHHHHHHhCC---C-CCEEEEccCHHHhcCCCcCCCCCC
Confidence                  3899999999753211   12225789999999999999986542   1 35999999976421000000 000


Q ss_pred             cccccccc-cCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh-HHHHHHHH--HHH
Q 017812          217 TITGKFFL-RSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS-FLSLMAFT--VLK  292 (365)
Q Consensus       217 ~~~~~~~~-~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~-~~~~~~~~--~~~  292 (365)
                      ..+..... +.........|+.||.+.+.+++.+.++      .+++++.++|+.+.+|....... ........  ...
T Consensus       143 ~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~------~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~  216 (322)
T PLN02662        143 VVDETWFSDPAFCEESKLWYVLSKTLAEEAAWKFAKE------NGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQ  216 (322)
T ss_pred             cCCcccCCChhHhhcccchHHHHHHHHHHHHHHHHHH------cCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCc
Confidence            01110000 0000112357999999999988877653      57999999999999886432110 00000000  000


Q ss_pred             --H--hcCCCCHHHHHHHHHHHhcCCCCCcccEEe
Q 017812          293 --L--LGLLQSPEKGINSVLDAALAPPETSGVYFF  323 (365)
Q Consensus       293 --~--~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~  323 (365)
                        +  ...+..++|+|++++.++.. +...|.|+.
T Consensus       217 ~~~~~~~~~i~v~Dva~a~~~~~~~-~~~~~~~~~  250 (322)
T PLN02662        217 TFPNASYRWVDVRDVANAHIQAFEI-PSASGRYCL  250 (322)
T ss_pred             cCCCCCcCeEEHHHHHHHHHHHhcC-cCcCCcEEE
Confidence              0  11357899999999965543 344566655

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.81  E-value=7e-18  Score=158.55  Aligned_cols=237  Identities=17%  Similarity=0.146  Sum_probs=153.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      .+++++++||||+|+||++++++|+++|++|++++|+.+....... +.......++.++.+|++|.+++.++++     
T Consensus         6 ~~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----   79 (338)
T PLN00198          6 PTGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAH-LRALQELGDLKIFGADLTDEESFEAPIA-----   79 (338)
T ss_pred             CCCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHH-HHhcCCCCceEEEEcCCCChHHHHHHHh-----
Confidence            3568999999999999999999999999999999998754433221 1111101257889999999988766542     


Q ss_pred             HhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc-----
Q 017812          136 LLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN-----  210 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~-----  210 (365)
                              ++|++||+|+.... .  ..+..+..+++|+.|+..+++++.+..   + .++||++||.+.+....     
T Consensus        80 --------~~d~vih~A~~~~~-~--~~~~~~~~~~~nv~g~~~ll~a~~~~~---~-~~~~v~~SS~~~~g~~~~~~~~  144 (338)
T PLN00198         80 --------GCDLVFHVATPVNF-A--SEDPENDMIKPAIQGVHNVLKACAKAK---S-VKRVILTSSAAAVSINKLSGTG  144 (338)
T ss_pred             --------cCCEEEEeCCCCcc-C--CCChHHHHHHHHHHHHHHHHHHHHhcC---C-ccEEEEeecceeeeccCCCCCC
Confidence                    38999999995321 1  123345678999999999999986642   1 36999999987664221     


Q ss_pred             ccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcccc-chhHHHHH-HH
Q 017812          211 AQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE-VPSFLSLM-AF  288 (365)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~-~~~~~~~~-~~  288 (365)
                      ...+.+......+. ..+.++...|+.||.+.+.+++.++.+      .|+.++.++|+.|..|-... .+...... ..
T Consensus       145 ~~~~E~~~~~~~~~-~~~~~p~~~Y~~sK~~~E~~~~~~~~~------~~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~  217 (338)
T PLN00198        145 LVMNEKNWTDVEFL-TSEKPPTWGYPASKTLAEKAAWKFAEE------NNIDLITVIPTLMAGPSLTSDIPSSLSLAMSL  217 (338)
T ss_pred             ceeccccCCchhhh-hhcCCccchhHHHHHHHHHHHHHHHHh------cCceEEEEeCCceECCCccCCCCCcHHHHHHH
Confidence            11111111000000 012345678999999999999888764      47899999999998875321 11111000 00


Q ss_pred             HH---H-------HH----hcCCCCHHHHHHHHHHHhcCCCCCcccE
Q 017812          289 TV---L-------KL----LGLLQSPEKGINSVLDAALAPPETSGVY  321 (365)
Q Consensus       289 ~~---~-------~~----~~~~~~p~e~A~~i~~~~l~~~~~~G~~  321 (365)
                      ..   .       .+    ..-+..++|+|++++.++.. +...|.|
T Consensus       218 ~~~~~~~~~g~~~~~~~~~~~~~i~V~D~a~a~~~~~~~-~~~~~~~  263 (338)
T PLN00198        218 ITGNEFLINGLKGMQMLSGSISITHVEDVCRAHIFLAEK-ESASGRY  263 (338)
T ss_pred             HcCCccccccccccccccCCcceeEHHHHHHHHHHHhhC-cCcCCcE
Confidence            00   0       00    01357899999999854433 3334555

>PLN02240 UDP-glucose 4-epimerase

Probab=99.81  E-value=1.1e-17  Score=158.16  Aligned_cols=184  Identities=16%  Similarity=0.140  Sum_probs=130.3

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhc--CCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRN--KDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      +++|+++||||+|+||.+++++|+++|++|++++|......+..+.+....  ...++.++.+|++|++++.+++++   
T Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~---   79 (352)
T PLN02240          3 LMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAS---   79 (352)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHh---
Confidence            678999999999999999999999999999999876433222222222211  124678899999999988777653   


Q ss_pred             HHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017812          135 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  214 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~  214 (365)
                              ..+|++||+||.....  .+.+..++.+++|+.++..+++++..    .+ .+++|++||...+.....   
T Consensus        80 --------~~~d~vih~a~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~Ss~~vyg~~~~---  141 (352)
T PLN02240         80 --------TRFDAVIHFAGLKAVG--ESVAKPLLYYDNNLVGTINLLEVMAK----HG-CKKLVFSSSATVYGQPEE---  141 (352)
T ss_pred             --------CCCCEEEEccccCCcc--ccccCHHHHHHHHHHHHHHHHHHHHH----cC-CCEEEEEccHHHhCCCCC---
Confidence                    2599999999975321  23356678999999999999886532    22 368999999755422111   


Q ss_pred             CccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCccc
Q 017812          215 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVK  272 (365)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~  272 (365)
                            ....+..+..+...|+.||.+.+.+++.++.+     ..++.+..++|+.+.
T Consensus       142 ------~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~-----~~~~~~~~~R~~~v~  188 (352)
T PLN02240        142 ------VPCTEEFPLSATNPYGRTKLFIEEICRDIHAS-----DPEWKIILLRYFNPV  188 (352)
T ss_pred             ------CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHh-----cCCCCEEEEeecCcC
Confidence                  01111244555678999999999999988764     246677777765543

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.81  E-value=8.8e-18  Score=158.83  Aligned_cols=235  Identities=17%  Similarity=0.132  Sum_probs=155.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .+++||||||+|+||.+++++|+++|++|++++|+.+....+..++..   +.++.++.+|++|.+++.++++       
T Consensus         9 ~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~-------   78 (353)
T PLN02896          9 ATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKE---GDRLRLFRADLQEEGSFDEAVK-------   78 (353)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhcc---CCeEEEEECCCCCHHHHHHHHc-------
Confidence            578999999999999999999999999999999987766555444422   3468899999999988766542       


Q ss_pred             ccCCCCCeeEEEecCCcccCCC---CCCHHHH--hHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc-
Q 017812          138 DSDMHSSIQLLINNAGILATSS---RLTPEGY--DQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA-  211 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~~~---~~~~~~~--~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~-  211 (365)
                            .+|++||+||......   ..+++.+  ..++++|+.|+..+++++.+..   + .++||++||.+.+..... 
T Consensus        79 ------~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~---~-~~~~v~~SS~~vyg~~~~~  148 (353)
T PLN02896         79 ------GCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSK---T-VKRVVFTSSISTLTAKDSN  148 (353)
T ss_pred             ------CCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcC---C-ccEEEEEechhhccccccC
Confidence                  3899999999864332   1233332  3567778899999999987653   1 369999999887643211 


Q ss_pred             -----cCCCcccccccccc-CCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcccc-chhHHH
Q 017812          212 -----QVNNETITGKFFLR-SKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE-VPSFLS  284 (365)
Q Consensus       212 -----~~~~~~~~~~~~~~-~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~-~~~~~~  284 (365)
                           ..+++  ....... ..+.++...|+.||.+.+.+++.++++      .++.+++++|+.|-.|.... .+....
T Consensus       149 ~~~~~~~~E~--~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~------~~~~~~~lR~~~vyGp~~~~~~~~~~~  220 (353)
T PLN02896        149 GRWRAVVDET--CQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKE------NGIDLVSVITTTVAGPFLTPSVPSSIQ  220 (353)
T ss_pred             CCCCCccCcc--cCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHH------cCCeEEEEcCCcccCCCcCCCCCchHH
Confidence                 01111  0000000 001234457999999999999888764      47999999999998875432 222111


Q ss_pred             HHHHH--H---HHH----------hcCCCCHHHHHHHHHHHhcCCCCCcccE
Q 017812          285 LMAFT--V---LKL----------LGLLQSPEKGINSVLDAALAPPETSGVY  321 (365)
Q Consensus       285 ~~~~~--~---~~~----------~~~~~~p~e~A~~i~~~~l~~~~~~G~~  321 (365)
                      .....  .   ..+          .+-+..++|+|++++.++.. +...|.|
T Consensus       221 ~~~~~~~g~~~~~~~~~~~~~~~~~~dfi~v~Dva~a~~~~l~~-~~~~~~~  271 (353)
T PLN02896        221 VLLSPITGDSKLFSILSAVNSRMGSIALVHIEDICDAHIFLMEQ-TKAEGRY  271 (353)
T ss_pred             HHHHHhcCCccccccccccccccCceeEEeHHHHHHHHHHHHhC-CCcCccE
Confidence            11100  0   000          01246899999999976543 3334555

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.80  E-value=1.1e-19  Score=162.59  Aligned_cols=228  Identities=17%  Similarity=0.171  Sum_probs=156.6

Q ss_pred             EEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCCceE----EEEecCCChhhHHHHHHHHHHHH
Q 017812           62 CIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLE----AFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        62 vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~----~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      ||||||+|-||.+++++|++.+. +|++++|++.++-++.+++.+..++.++.    .+.+|++|.+.+..++++     
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~-----   75 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEE-----   75 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT------
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhh-----
Confidence            79999999999999999999995 89999999999999999997766554443    457899999988887753     


Q ss_pred             hccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017812          137 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  216 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~  216 (365)
                            .++|+++|.|+.-..  .+-++...+.+++|++|+.++++++..+-     -.++|++||--+.          
T Consensus        76 ------~~pdiVfHaAA~KhV--pl~E~~p~eav~tNv~GT~nv~~aa~~~~-----v~~~v~ISTDKAv----------  132 (293)
T PF02719_consen   76 ------YKPDIVFHAAALKHV--PLMEDNPFEAVKTNVLGTQNVAEAAIEHG-----VERFVFISTDKAV----------  132 (293)
T ss_dssp             -------T-SEEEE------H--HHHCCCHHHHHHHHCHHHHHHHHHHHHTT------SEEEEEEECGCS----------
T ss_pred             ------cCCCEEEEChhcCCC--ChHHhCHHHHHHHHHHHHHHHHHHHHHcC-----CCEEEEccccccC----------
Confidence                  469999999997421  11123456789999999999999998763     3599999996554          


Q ss_pred             cccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHH------
Q 017812          217 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTV------  290 (365)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~------  290 (365)
                                   .+.+.|++||...+.++.+.+....   ..+.++.+|+-|.|-..-..-+|-+..+.....      
T Consensus       133 -------------~PtnvmGatKrlaE~l~~~~~~~~~---~~~t~f~~VRFGNVlgS~GSVip~F~~Qi~~g~PlTvT~  196 (293)
T PF02719_consen  133 -------------NPTNVMGATKRLAEKLVQAANQYSG---NSDTKFSSVRFGNVLGSRGSVIPLFKKQIKNGGPLTVTD  196 (293)
T ss_dssp             -------------S--SHHHHHHHHHHHHHHHHCCTSS---SS--EEEEEEE-EETTGTTSCHHHHHHHHHTTSSEEECE
T ss_pred             -------------CCCcHHHHHHHHHHHHHHHHhhhCC---CCCcEEEEEEecceecCCCcHHHHHHHHHHcCCcceeCC
Confidence                         4567899999999999999887764   567999999999996544433444433332110      


Q ss_pred             HHHhcCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccccCCcc
Q 017812          291 LKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSAL  335 (365)
Q Consensus       291 ~~~~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~~~~~~  335 (365)
                      ....+++.|++|+++.++.++....  +|+.|.-+-|++++..+.
T Consensus       197 p~mtRffmti~EAv~Lvl~a~~~~~--~geifvl~mg~~v~I~dl  239 (293)
T PF02719_consen  197 PDMTRFFMTIEEAVQLVLQAAALAK--GGEIFVLDMGEPVKILDL  239 (293)
T ss_dssp             TT-EEEEE-HHHHHHHHHHHHHH----TTEEEEE---TCEECCCH
T ss_pred             CCcEEEEecHHHHHHHHHHHHhhCC--CCcEEEecCCCCcCHHHH
Confidence            0122456899999999997765543  578888899999865554

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.78  E-value=2e-17  Score=153.56  Aligned_cols=233  Identities=15%  Similarity=0.118  Sum_probs=152.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHCC--CEEEEEecCchh-HHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           61 VCIVTGATSGLGAAAAYALSREG--FHVVLVGRSSHL-LSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G--~~Vil~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      +++||||+|+||.+++++|++.|  .+|++.+|.... -.+..+.+.   ...++.++.+|++|++++.++++.      
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~------   71 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLE---DNPRYRFVKGDIGDRELVSRLFTE------   71 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhc---cCCCcEEEEcCCcCHHHHHHHHhh------
Confidence            38999999999999999999987  789988774321 111112221   123678899999999998877653      


Q ss_pred             ccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcc
Q 017812          138 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNET  217 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~  217 (365)
                           .++|++||+||....  ..+.+..+..+++|+.++..+++++.+.+.    ..++|++||...+.......   .
T Consensus        72 -----~~~d~vi~~a~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~----~~~~i~~Ss~~v~g~~~~~~---~  137 (317)
T TIGR01181        72 -----HQPDAVVHFAAESHV--DRSISGPAAFIETNVVGTYTLLEAVRKYWH----EFRFHHISTDEVYGDLEKGD---A  137 (317)
T ss_pred             -----cCCCEEEEcccccCc--hhhhhCHHHHHHHHHHHHHHHHHHHHhcCC----CceEEEeeccceeCCCCCCC---C
Confidence                 248999999997532  223445678899999999999998866542    25899999976553221100   0


Q ss_pred             ccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHH--HHh-
Q 017812          218 ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVL--KLL-  294 (365)
Q Consensus       218 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~--~~~-  294 (365)
                           ..+..+..+...|+.+|++.+.+++.++++      .++++..++|+.+-.+...... ..........  .+. 
T Consensus       138 -----~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~------~~~~~~i~R~~~i~G~~~~~~~-~~~~~~~~~~~~~~~~  205 (317)
T TIGR01181       138 -----FTETTPLAPSSPYSASKAASDHLVRAYHRT------YGLPALITRCSNNYGPYQFPEK-LIPLMITNALAGKPLP  205 (317)
T ss_pred             -----cCCCCCCCCCCchHHHHHHHHHHHHHHHHH------hCCCeEEEEeccccCCCCCccc-HHHHHHHHHhcCCCce
Confidence                 011133445568999999999999998765      4688999999988766432111 1111100000  000 


Q ss_pred             --c------CCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017812          295 --G------LLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  330 (365)
Q Consensus       295 --~------~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~  330 (365)
                        +      -+..++|+|+++..++. . ...|..|...+++++
T Consensus       206 ~~~~g~~~~~~i~v~D~a~~~~~~~~-~-~~~~~~~~~~~~~~~  247 (317)
T TIGR01181       206 VYGDGQQVRDWLYVEDHCRAIYLVLE-K-GRVGETYNIGGGNER  247 (317)
T ss_pred             EeCCCceEEeeEEHHHHHHHHHHHHc-C-CCCCceEEeCCCCce
Confidence              0      23468999999986553 2 334566666666655

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.78  E-value=1.8e-17  Score=160.57  Aligned_cols=199  Identities=16%  Similarity=0.110  Sum_probs=137.3

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCch---h----H---------HHHHHHHHhhcCCCceEEEEec
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH---L----L---------SETMADITSRNKDARLEAFQVD  118 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~---~----~---------~~~~~~l~~~~~~~~~~~~~~D  118 (365)
                      ..+++++||||||+|+||++++++|+++|++|++++|...   .    .         .+-.+.+... .+.++.++.+|
T Consensus        43 ~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~~v~~D  121 (442)
T PLN02572         43 SSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEV-SGKEIELYVGD  121 (442)
T ss_pred             ccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHh-hCCcceEEECC
Confidence            3578999999999999999999999999999999875321   0    0         0011111111 12368899999


Q ss_pred             CCChhhHHHHHHHHHHHHhccCCCCCeeEEEecCCcccC-CCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeE
Q 017812          119 LSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILAT-SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRI  197 (365)
Q Consensus       119 ls~~~~v~~~~~~~~~~~~~~~~~~~id~lv~nAG~~~~-~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~i  197 (365)
                      ++|.+++.+++++           .++|+|||+|+.... ....+++..+..+++|+.|+.++++++...-.    ..++
T Consensus       122 l~d~~~v~~~l~~-----------~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv----~~~~  186 (442)
T PLN02572        122 ICDFEFLSEAFKS-----------FEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAP----DCHL  186 (442)
T ss_pred             CCCHHHHHHHHHh-----------CCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCC----CccE
Confidence            9999988887764           248999999976432 22345566788899999999999998865421    2489


Q ss_pred             EEEcCCcccccccccCCCccccccc-c-cc--CCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccC
Q 017812          198 VNVTSFTHRNVFNAQVNNETITGKF-F-LR--SKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKT  273 (365)
Q Consensus       198 V~vsS~~~~~~~~~~~~~~~~~~~~-~-~~--~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T  273 (365)
                      |++||.+.+.......+...+.... . .+  ..+..+...|+.||.+.+.+++..++      ..|+.+..++|+.+-.
T Consensus       187 V~~SS~~vYG~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~------~~gl~~v~lR~~~vyG  260 (442)
T PLN02572        187 VKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCK------AWGIRATDLNQGVVYG  260 (442)
T ss_pred             EEEecceecCCCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHH------hcCCCEEEEecccccC
Confidence            9999988764322111111110000 0 00  02334567899999999988887765      3589999999999977


Q ss_pred             Cc
Q 017812          274 NI  275 (365)
Q Consensus       274 ~~  275 (365)
                      |.
T Consensus       261 p~  262 (442)
T PLN02572        261 VR  262 (442)
T ss_pred             CC
Confidence            75

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.77  E-value=6.1e-17  Score=152.74  Aligned_cols=240  Identities=12%  Similarity=0.040  Sum_probs=157.2

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhc---CCCceEEEEecCCChhhHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRN---KDARLEAFQVDLSSFQSVLKFKDSLQ  133 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~---~~~~~~~~~~Dls~~~~v~~~~~~~~  133 (365)
                      +++++|+||||+|.||.+++++|.++|++|++++|................   ...++.++.+|++|.+++..+++   
T Consensus        13 ~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~---   89 (348)
T PRK15181         13 LAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK---   89 (348)
T ss_pred             ccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh---
Confidence            567899999999999999999999999999999986543222222222111   11357889999999877655542   


Q ss_pred             HHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          134 QWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       134 ~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                                .+|++||.|+......  +.++.+..+++|+.|+..+++++...    + -.++|++||...+.......
T Consensus        90 ----------~~d~ViHlAa~~~~~~--~~~~~~~~~~~Nv~gt~nll~~~~~~----~-~~~~v~~SS~~vyg~~~~~~  152 (348)
T PRK15181         90 ----------NVDYVLHQAALGSVPR--SLKDPIATNSANIDGFLNMLTAARDA----H-VSSFTYAASSSTYGDHPDLP  152 (348)
T ss_pred             ----------CCCEEEECccccCchh--hhhCHHHHHHHHHHHHHHHHHHHHHc----C-CCeEEEeechHhhCCCCCCC
Confidence                      3899999999753321  22334567999999999999987432    2 35999999987663221110


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc-------hhHHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV-------PSFLSLM  286 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~-------~~~~~~~  286 (365)
                       .        .+..+..+...|+.||.+.+.+++.++++      .++++..++|+.+-.|-....       +......
T Consensus       153 -~--------~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~------~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~  217 (348)
T PRK15181        153 -K--------IEERIGRPLSPYAVTKYVNELYADVFARS------YEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSL  217 (348)
T ss_pred             -C--------CCCCCCCCCChhhHHHHHHHHHHHHHHHH------hCCCEEEEEecceeCcCCCCCCccccCHHHHHHHH
Confidence             0        01122334568999999999988877653      578999999999977643211       1111110


Q ss_pred             HH-HHHHHh------cCCCCHHHHHHHHHHHhcCCC-CCcccEEeCCCCcccc
Q 017812          287 AF-TVLKLL------GLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKGRTVN  331 (365)
Q Consensus       287 ~~-~~~~~~------~~~~~p~e~A~~i~~~~l~~~-~~~G~~~~~~~g~~~~  331 (365)
                      .. ......      +-+...+|+|++++.++..++ ...|..|....|++..
T Consensus       218 ~~~~~i~~~g~g~~~rd~i~v~D~a~a~~~~~~~~~~~~~~~~yni~~g~~~s  270 (348)
T PRK15181        218 LKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLASKNKVYNVAVGDRTS  270 (348)
T ss_pred             HcCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhcccccCCCCEEEecCCCcEe
Confidence            00 000001      123579999999986554433 2356777777777764

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.77  E-value=1.9e-16  Score=148.75  Aligned_cols=237  Identities=14%  Similarity=0.076  Sum_probs=151.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhccC
Q 017812           61 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  140 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~~  140 (365)
                      +++||||+|+||++++++|+++|++|++++|...........+... .+.++.++.+|++|.+++.++++.         
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~---------   71 (338)
T PRK10675          2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERL-GGKHPTFVEGDIRNEALLTEILHD---------   71 (338)
T ss_pred             eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHh-cCCCceEEEccCCCHHHHHHHHhc---------
Confidence            5999999999999999999999999999987543333322333222 134567889999999887776542         


Q ss_pred             CCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCccccc
Q 017812          141 MHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITG  220 (365)
Q Consensus       141 ~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~~~~  220 (365)
                        .++|++||+||......  ..+.....+++|+.++..+++++.    +.+ .+++|++||...+.....    ..   
T Consensus        72 --~~~d~vvh~a~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~----~~~-~~~~v~~Ss~~~yg~~~~----~~---  135 (338)
T PRK10675         72 --HAIDTVIHFAGLKAVGE--SVQKPLEYYDNNVNGTLRLISAMR----AAN-VKNLIFSSSATVYGDQPK----IP---  135 (338)
T ss_pred             --CCCCEEEECCccccccc--hhhCHHHHHHHHHHHHHHHHHHHH----HcC-CCEEEEeccHHhhCCCCC----Cc---
Confidence              35999999999753221  223345688999999999988664    333 468999999765532110    00   


Q ss_pred             cccccCCCC-ChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCc----cc----cchh-HHHHHHHHH
Q 017812          221 KFFLRSKCY-PCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNI----MR----EVPS-FLSLMAFTV  290 (365)
Q Consensus       221 ~~~~~~~~~-~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~----~~----~~~~-~~~~~~~~~  290 (365)
                        +.+..+. .+...|+.||.+.+.+++.++++.     .++++..++|+.+..+.    ..    ..+. .........
T Consensus       136 --~~E~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-----~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~  208 (338)
T PRK10675        136 --YVESFPTGTPQSPYGKSKLMVEQILTDLQKAQ-----PDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVA  208 (338)
T ss_pred             --cccccCCCCCCChhHHHHHHHHHHHHHHHHhc-----CCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHH
Confidence              1111222 346789999999999999987653     46777778776654432    10    1111 111111110


Q ss_pred             HH---H---------------hcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017812          291 LK---L---------------LGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  330 (365)
Q Consensus       291 ~~---~---------------~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~  330 (365)
                      ..   +               ..-+..++|+|++++.++... +...|+.|...+++++
T Consensus       209 ~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~a~~~~~~~~~~~~~~~~~~~ni~~~~~~  267 (338)
T PRK10675        209 VGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHVAAMEKLANKPGVHIYNLGAGVGS  267 (338)
T ss_pred             hcCCCceEEeCCcCCCCCCcEEEeeEEHHHHHHHHHHHHHhhhccCCCceEEecCCCce
Confidence            00   0               012468999999998655432 2334567776777766

>PLN02686 cinnamoyl-CoA reductase

Probab=99.77  E-value=6.8e-17  Score=153.34  Aligned_cols=231  Identities=13%  Similarity=0.059  Sum_probs=147.4

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhc----CCCceEEEEecCCChhhHHHHHH
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRN----KDARLEAFQVDLSSFQSVLKFKD  130 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~----~~~~~~~~~~Dls~~~~v~~~~~  130 (365)
                      .+.++|+||||||+|+||.+++++|+++|++|+++.|+.+..+.+ +++....    .+..+.++.+|++|.+++.++++
T Consensus        49 ~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l-~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~  127 (367)
T PLN02686         49 ADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKL-REMEMFGEMGRSNDGIWTVMANLTEPESLHEAFD  127 (367)
T ss_pred             cCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHhhhccccccCCceEEEEcCCCCHHHHHHHHH
Confidence            357899999999999999999999999999999999987665544 2322111    01357889999999988877654


Q ss_pred             HHHHHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc--ccc
Q 017812          131 SLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH--RNV  208 (365)
Q Consensus       131 ~~~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~--~~~  208 (365)
                      .             +|.++|.|+...+.....  ..+...++|+.++..+++++...-   + -.++|++||.++  +..
T Consensus       128 ~-------------~d~V~hlA~~~~~~~~~~--~~~~~~~~nv~gt~~llea~~~~~---~-v~r~V~~SS~~~~vyg~  188 (367)
T PLN02686        128 G-------------CAGVFHTSAFVDPAGLSG--YTKSMAELEAKASENVIEACVRTE---S-VRKCVFTSSLLACVWRQ  188 (367)
T ss_pred             h-------------ccEEEecCeeeccccccc--ccchhhhhhHHHHHHHHHHHHhcC---C-ccEEEEeccHHHhcccc
Confidence            2             688899988754322111  113456789999999998875421   1 359999999742  211


Q ss_pred             c-cccCCCccccccccc-cCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcccc-chhHHHH
Q 017812          209 F-NAQVNNETITGKFFL-RSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE-VPSFLSL  285 (365)
Q Consensus       209 ~-~~~~~~~~~~~~~~~-~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~-~~~~~~~  285 (365)
                      . ....+ ..++..... ...+..+...|+.||.+.+.+++.++++      .|+++++++|+.|.+|.... .+.....
T Consensus       189 ~~~~~~~-~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~------~gl~~v~lRp~~vyGp~~~~~~~~~~~~  261 (367)
T PLN02686        189 NYPHDLP-PVIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAARG------KGLKLATICPALVTGPGFFRRNSTATIA  261 (367)
T ss_pred             cCCCCCC-cccCCCCCCChhhcccccchHHHHHHHHHHHHHHHHHh------cCceEEEEcCCceECCCCCCCCChhHHH
Confidence            0 00000 001110000 0123345567999999999999887653      58999999999999885422 1111100


Q ss_pred             HHHHHHHHh--c--CCCCHHHHHHHHHHHhc
Q 017812          286 MAFTVLKLL--G--LLQSPEKGINSVLDAAL  312 (365)
Q Consensus       286 ~~~~~~~~~--~--~~~~p~e~A~~i~~~~l  312 (365)
                      .........  +  .+..++|+|++++.++.
T Consensus       262 ~~~g~~~~~g~g~~~~v~V~Dva~A~~~al~  292 (367)
T PLN02686        262 YLKGAQEMLADGLLATADVERLAEAHVCVYE  292 (367)
T ss_pred             HhcCCCccCCCCCcCeEEHHHHHHHHHHHHh
Confidence            000000011  1  25689999999986554

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.77  E-value=7.5e-17  Score=152.40  Aligned_cols=245  Identities=13%  Similarity=0.065  Sum_probs=152.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHCCCE-EEEEecCc--hhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           61 VCIVTGATSGLGAAAAYALSREGFH-VVLVGRSS--HLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G~~-Vil~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      +++||||+|+||.+++++|+++|.+ |+.+++..  ...+.    +....++.++.++.+|++|.+++++++++      
T Consensus         2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~------   71 (352)
T PRK10084          2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLES----LADVSDSERYVFEHADICDRAELDRIFAQ------   71 (352)
T ss_pred             eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHH----HHhcccCCceEEEEecCCCHHHHHHHHHh------
Confidence            5899999999999999999999986 55455532  11111    11112234678899999999998887753      


Q ss_pred             ccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcC----CCCCeEEEEcCCcccccccccC
Q 017812          138 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNS----PVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~----~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                           ..+|++||+||....  ..+.+..+..+++|+.|+..+++++.+.|...    +...++|++||...+.......
T Consensus        72 -----~~~d~vih~A~~~~~--~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~  144 (352)
T PRK10084         72 -----HQPDAVMHLAAESHV--DRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPD  144 (352)
T ss_pred             -----cCCCEEEECCcccCC--cchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccc
Confidence                 359999999997532  11223457789999999999999998876432    1124899999987653211100


Q ss_pred             CCcc-ccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccc--cc-hhHHHHHHHH
Q 017812          214 NNET-ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMR--EV-PSFLSLMAFT  289 (365)
Q Consensus       214 ~~~~-~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~--~~-~~~~~~~~~~  289 (365)
                      +... .....+.+..+..+...|+.||.+.+.+++.+++++      |+.+..+.|+.|-.|-..  .+ +.........
T Consensus       145 ~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~------g~~~vilr~~~v~Gp~~~~~~~~~~~~~~~~~~  218 (352)
T PRK10084        145 EVENSEELPLFTETTAYAPSSPYSASKASSDHLVRAWLRTY------GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEG  218 (352)
T ss_pred             cccccccCCCccccCCCCCCChhHHHHHHHHHHHHHHHHHh------CCCEEEEeccceeCCCcCccchHHHHHHHHhcC
Confidence            0000 000011222445566789999999999999988764      566777888877665421  11 1110000000


Q ss_pred             -HHHHh------cCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017812          290 -VLKLL------GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  330 (365)
Q Consensus       290 -~~~~~------~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~  330 (365)
                       .....      .-+..++|+|++++.++ ..+ ..|..|...++++.
T Consensus       219 ~~~~~~~~g~~~~~~v~v~D~a~a~~~~l-~~~-~~~~~yni~~~~~~  264 (352)
T PRK10084        219 KPLPIYGKGDQIRDWLYVEDHARALYKVV-TEG-KAGETYNIGGHNEK  264 (352)
T ss_pred             CCeEEeCCCCeEEeeEEHHHHHHHHHHHH-hcC-CCCceEEeCCCCcC
Confidence             00001      12468999999998544 333 34566666666655

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.75  E-value=8.5e-17  Score=144.81  Aligned_cols=209  Identities=16%  Similarity=0.147  Sum_probs=132.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      +.++++++||||||+||++++++|+++|++|+++.|+.++..+...    .  +..+.++++|++|..  ..+.+.+.  
T Consensus        14 ~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~----~--~~~~~~~~~Dl~d~~--~~l~~~~~--   83 (251)
T PLN00141         14 NVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLP----Q--DPSLQIVRADVTEGS--DKLVEAIG--   83 (251)
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcc----c--CCceEEEEeeCCCCH--HHHHHHhh--
Confidence            4567899999999999999999999999999999999876543221    1  236888999999832  12222221  


Q ss_pred             HhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCC
Q 017812          136 LLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNN  215 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~  215 (365)
                             .++|++|+|+|.......      ...+++|+.++..+++++.    +.+ .++||++||.+.+...      
T Consensus        84 -------~~~d~vi~~~g~~~~~~~------~~~~~~n~~~~~~ll~a~~----~~~-~~~iV~iSS~~v~g~~------  139 (251)
T PLN00141         84 -------DDSDAVICATGFRRSFDP------FAPWKVDNFGTVNLVEACR----KAG-VTRFILVSSILVNGAA------  139 (251)
T ss_pred             -------cCCCEEEECCCCCcCCCC------CCceeeehHHHHHHHHHHH----HcC-CCEEEEEccccccCCC------
Confidence                   259999999997422111      1235789999988888873    333 5799999998754211      


Q ss_pred             ccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHH--hCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017812          216 ETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRN--LGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  293 (365)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e--~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  293 (365)
                                 .+.+....|...|.+...+...+..|  +.   ..|++++.++||++.++...........     ...
T Consensus       140 -----------~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~---~~gi~~~iirpg~~~~~~~~~~~~~~~~-----~~~  200 (251)
T PLN00141        140 -----------MGQILNPAYIFLNLFGLTLVAKLQAEKYIR---KSGINYTIVRPGGLTNDPPTGNIVMEPE-----DTL  200 (251)
T ss_pred             -----------cccccCcchhHHHHHHHHHHHHHHHHHHHH---hcCCcEEEEECCCccCCCCCceEEECCC-----Ccc
Confidence                       11112233555554333322222222  33   5689999999999977653221000000     000


Q ss_pred             hcCCCCHHHHHHHHHHHhcCCCCC
Q 017812          294 LGLLQSPEKGINSVLDAALAPPET  317 (365)
Q Consensus       294 ~~~~~~p~e~A~~i~~~~l~~~~~  317 (365)
                      .....+++++|+.+++++..++..
T Consensus       201 ~~~~i~~~dvA~~~~~~~~~~~~~  224 (251)
T PLN00141        201 YEGSISRDQVAEVAVEALLCPESS  224 (251)
T ss_pred             ccCcccHHHHHHHHHHHhcChhhc
Confidence            112469999999999887765543

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.75  E-value=2.9e-16  Score=146.69  Aligned_cols=226  Identities=18%  Similarity=0.093  Sum_probs=148.9

Q ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhccC
Q 017812           61 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  140 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~~  140 (365)
                      +++||||+|+||.+++++|+++|++|++++|+.+.....    .    ...+..+.+|++|.+++.++++          
T Consensus         2 ~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~----~~~~~~~~~D~~~~~~l~~~~~----------   63 (328)
T TIGR03466         2 KVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNL----E----GLDVEIVEGDLRDPASLRKAVA----------   63 (328)
T ss_pred             eEEEECCccchhHHHHHHHHHCCCEEEEEEecCcccccc----c----cCCceEEEeeCCCHHHHHHHHh----------
Confidence            699999999999999999999999999999987653221    1    2357889999999988766543          


Q ss_pred             CCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCccccc
Q 017812          141 MHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITG  220 (365)
Q Consensus       141 ~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~~~~  220 (365)
                         .+|++||+|+....    ..+..+..+++|+.++..+++++...    + .+++|++||...+.......+.++...
T Consensus        64 ---~~d~vi~~a~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~~v~~SS~~~~~~~~~~~~~~e~~~  131 (328)
T TIGR03466        64 ---GCRALFHVAADYRL----WAPDPEEMYAANVEGTRNLLRAALEA----G-VERVVYTSSVATLGVRGDGTPADETTP  131 (328)
T ss_pred             ---CCCEEEEeceeccc----CCCCHHHHHHHHHHHHHHHHHHHHHh----C-CCeEEEEechhhcCcCCCCCCcCccCC
Confidence               38999999986422    12345778999999999999987543    2 469999999877642111111110000


Q ss_pred             cccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHH--HHh----
Q 017812          221 KFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVL--KLL----  294 (365)
Q Consensus       221 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~--~~~----  294 (365)
                           ..+......|+.+|.+.+.+++.++.+      .++.++.++|+.+-.+.................  .+.    
T Consensus       132 -----~~~~~~~~~Y~~sK~~~e~~~~~~~~~------~~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (328)
T TIGR03466       132 -----SSLDDMIGHYKRSKFLAEQAALEMAAE------KGLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKMPAYVDT  200 (328)
T ss_pred             -----CCcccccChHHHHHHHHHHHHHHHHHh------cCCCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCCceeeCC
Confidence                 012222457999999999999888653      478899999998876543221111101000000  000    


Q ss_pred             -cCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017812          295 -GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  330 (365)
Q Consensus       295 -~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~  330 (365)
                       .-+..++|+|++++.++..  ...|.+|..+ |+++
T Consensus       201 ~~~~i~v~D~a~a~~~~~~~--~~~~~~~~~~-~~~~  234 (328)
T TIGR03466       201 GLNLVHVDDVAEGHLLALER--GRIGERYILG-GENL  234 (328)
T ss_pred             CcceEEHHHHHHHHHHHHhC--CCCCceEEec-CCCc
Confidence             1235799999998865543  3356666654 4544

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.75  E-value=2.2e-16  Score=138.54  Aligned_cols=251  Identities=16%  Similarity=0.111  Sum_probs=170.5

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCC--EEEEEecCc--hhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGF--HVVLVGRSS--HLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~--~Vil~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      +.+|||||.|.||.++++++.++.-  +|+.++.=.  ...+.+ +.+   ..+.+..+++.|++|.+.+.+++++    
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l-~~~---~~~~~~~fv~~DI~D~~~v~~~~~~----   72 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENL-ADV---EDSPRYRFVQGDICDRELVDRLFKE----   72 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHH-Hhh---hcCCCceEEeccccCHHHHHHHHHh----
Confidence            3689999999999999999998875  566666521  112222 222   2246899999999999999888764    


Q ss_pred             HhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCC
Q 017812          136 LLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNN  215 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~  215 (365)
                             -.+|+++|-|+=.  ..+-+.++-+..+++|++|++.|++++..+..+    -|++.||.--.++....    
T Consensus        73 -------~~~D~VvhfAAES--HVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~----frf~HISTDEVYG~l~~----  135 (340)
T COG1088          73 -------YQPDAVVHFAAES--HVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGK----FRFHHISTDEVYGDLGL----  135 (340)
T ss_pred             -------cCCCeEEEechhc--cccccccChhhhhhcchHHHHHHHHHHHHhccc----ceEEEeccccccccccC----
Confidence                   3599999999853  345566677788999999999999999888643    48999999766532211    


Q ss_pred             ccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHH-HHHHHH--H
Q 017812          216 ETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSL-MAFTVL--K  292 (365)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~-~~~~~~--~  292 (365)
                         ....|.+..|+.+.++|++||||..+++++..+-      +|+.++..++..--.|-.  +|+.... .....+  .
T Consensus       136 ---~~~~FtE~tp~~PsSPYSASKAasD~lVray~~T------Yglp~~ItrcSNNYGPyq--fpEKlIP~~I~nal~g~  204 (340)
T COG1088         136 ---DDDAFTETTPYNPSSPYSASKAASDLLVRAYVRT------YGLPATITRCSNNYGPYQ--FPEKLIPLMIINALLGK  204 (340)
T ss_pred             ---CCCCcccCCCCCCCCCcchhhhhHHHHHHHHHHH------cCCceEEecCCCCcCCCc--CchhhhHHHHHHHHcCC
Confidence               1224666689999999999999999999999985      577888777766555543  2221111 110000  0


Q ss_pred             Hh---------cCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccccCCcccCCHHHHHHHHHHHHHhhhccCC
Q 017812          293 LL---------GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFINSQL  358 (365)
Q Consensus       293 ~~---------~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~~~~~~~~d~~~~~~lw~~~~~~~~~~~~  358 (365)
                      ++         +-+.-++|=++++...+.. .. .|+.|.+++|....          --.+-+..++++++..+
T Consensus       205 ~lpvYGdG~~iRDWl~VeDh~~ai~~Vl~k-g~-~GE~YNIgg~~E~~----------Nlevv~~i~~~l~~~~~  267 (340)
T COG1088         205 PLPVYGDGLQIRDWLYVEDHCRAIDLVLTK-GK-IGETYNIGGGNERT----------NLEVVKTICELLGKDKP  267 (340)
T ss_pred             CCceecCCcceeeeEEeHhHHHHHHHHHhc-Cc-CCceEEeCCCccch----------HHHHHHHHHHHhCcccc
Confidence            00         1234678888888743333 33 38999888776552          22345555555555444

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.75  E-value=6.1e-16  Score=144.29  Aligned_cols=179  Identities=16%  Similarity=0.115  Sum_probs=128.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhccC
Q 017812           61 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  140 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~~  140 (365)
                      +|+||||+|+||.+++++|.++|++|++++|......+....+...   .++..+.+|+++.+++.++++.         
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~---------   68 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERI---TRVTFVEGDLRDRELLDRLFEE---------   68 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccc---cceEEEECCCCCHHHHHHHHHh---------
Confidence            3799999999999999999999999998876543322222222211   2577889999999998877652         


Q ss_pred             CCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCccccc
Q 017812          141 MHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITG  220 (365)
Q Consensus       141 ~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~~~~  220 (365)
                        .++|++|||||......  +.+...+.+++|+.++..+++++..    .+ .+++|++||...+.......       
T Consensus        69 --~~~d~vv~~ag~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~ss~~~~g~~~~~~-------  132 (328)
T TIGR01179        69 --HKIDAVIHFAGLIAVGE--SVQDPLKYYRNNVVNTLNLLEAMQQ----TG-VKKFIFSSSAAVYGEPSSIP-------  132 (328)
T ss_pred             --CCCcEEEECccccCcch--hhcCchhhhhhhHHHHHHHHHHHHh----cC-CCEEEEecchhhcCCCCCCC-------
Confidence              46999999999753321  2334567889999999999887643    22 46999999976542211100       


Q ss_pred             cccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCC
Q 017812          221 KFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTN  274 (365)
Q Consensus       221 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~  274 (365)
                        +.+..+..+...|+.+|++.+.+++.++++     ..+++++.++|+.+..+
T Consensus       133 --~~e~~~~~~~~~y~~sK~~~e~~~~~~~~~-----~~~~~~~ilR~~~v~g~  179 (328)
T TIGR01179       133 --ISEDSPLGPINPYGRSKLMSERILRDLSKA-----DPGLSYVILRYFNVAGA  179 (328)
T ss_pred             --ccccCCCCCCCchHHHHHHHHHHHHHHHHh-----ccCCCEEEEecCcccCC
Confidence              111133445678999999999999998765     35789999999888765

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.74  E-value=1.2e-15  Score=144.42  Aligned_cols=239  Identities=18%  Similarity=0.148  Sum_probs=147.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHCC--CEEEEEecCchhH---HHHHHHHHhhcC-----C-CceEEEEecCCChhh---HH
Q 017812           61 VCIVTGATSGLGAAAAYALSREG--FHVVLVGRSSHLL---SETMADITSRNK-----D-ARLEAFQVDLSSFQS---VL  126 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G--~~Vil~~r~~~~~---~~~~~~l~~~~~-----~-~~~~~~~~Dls~~~~---v~  126 (365)
                      +|+||||||+||.+++++|+++|  ++|+++.|+.+..   +.+.+.+.....     . .++.++.+|++++..   -.
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            48999999999999999999999  7899999986532   222222222110     1 478999999987531   11


Q ss_pred             HHHHHHHHHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccc
Q 017812          127 KFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHR  206 (365)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~  206 (365)
                      . ...+.         ..+|++||||+.....     ..++..+++|+.|+..+++.+...    + ..++|++||.+.+
T Consensus        81 ~-~~~~~---------~~~d~vih~a~~~~~~-----~~~~~~~~~nv~g~~~ll~~a~~~----~-~~~~v~iSS~~v~  140 (367)
T TIGR01746        81 E-WERLA---------ENVDTIVHNGALVNWV-----YPYSELRAANVLGTREVLRLAASG----R-AKPLHYVSTISVL  140 (367)
T ss_pred             H-HHHHH---------hhCCEEEeCCcEeccC-----CcHHHHhhhhhHHHHHHHHHHhhC----C-CceEEEEcccccc
Confidence            1 12221         3599999999975421     235677889999999998877543    2 3469999999876


Q ss_pred             ccccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcccc-ch--hHH
Q 017812          207 NVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE-VP--SFL  283 (365)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~-~~--~~~  283 (365)
                      .......  ....... . .........|+.||++.+.+++..+       ..|++++.++||.+.++.... ..  ...
T Consensus       141 ~~~~~~~--~~~~~~~-~-~~~~~~~~~Y~~sK~~~E~~~~~~~-------~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~  209 (367)
T TIGR01746       141 AAIDLST--VTEDDAI-V-TPPPGLAGGYAQSKWVAELLVREAS-------DRGLPVTIVRPGRILGNSYTGAINSSDIL  209 (367)
T ss_pred             CCcCCCC--ccccccc-c-ccccccCCChHHHHHHHHHHHHHHH-------hcCCCEEEECCCceeecCCCCCCCchhHH
Confidence            4321110  0000000 0 0112234579999999998887654       348999999999998752221 11  111


Q ss_pred             HHHHHH--H--HHHh-----cCCCCHHHHHHHHHHHhcCCCC-CcccEEeCCCCccc
Q 017812          284 SLMAFT--V--LKLL-----GLLQSPEKGINSVLDAALAPPE-TSGVYFFGGKGRTV  330 (365)
Q Consensus       284 ~~~~~~--~--~~~~-----~~~~~p~e~A~~i~~~~l~~~~-~~G~~~~~~~g~~~  330 (365)
                      ......  .  ..|.     .-+..++++|++++.++..... ..|..|...+++++
T Consensus       210 ~~~~~~~~~~~~~p~~~~~~~~~~~vddva~ai~~~~~~~~~~~~~~~~~v~~~~~~  266 (367)
T TIGR01746       210 WRMVKGCLALGAYPDSPELTEDLTPVDYVARAIVALSSQPAASAGGPVFHVVNPEPV  266 (367)
T ss_pred             HHHHHHHHHhCCCCCCCccccCcccHHHHHHHHHHHHhCCCcccCCceEEecCCCCC
Confidence            111000  0  0010     1156789999999976554432 23667766665554

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PLN02427 UDP-apiose/xylose synthase

Probab=99.73  E-value=1e-15  Score=146.54  Aligned_cols=247  Identities=15%  Similarity=0.117  Sum_probs=151.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHC-CCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSRE-GFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~-G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      .++.++|+||||+|.||.+++++|+++ |++|++++|+.++........... ...++.++.+|++|.+.+.++++    
T Consensus        11 ~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~-~~~~~~~~~~Dl~d~~~l~~~~~----   85 (386)
T PLN02427         11 PIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVP-WSGRIQFHRINIKHDSRLEGLIK----   85 (386)
T ss_pred             cccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhcccccc-CCCCeEEEEcCCCChHHHHHHhh----
Confidence            355678999999999999999999998 589999998866543322110000 12368899999999888766543    


Q ss_pred             HHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc-cC
Q 017812          135 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA-QV  213 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~-~~  213 (365)
                               .+|+|||.|+...+...  ...-.+.+..|+.++..+++++...    +  .++|++||...+..... ..
T Consensus        86 ---------~~d~ViHlAa~~~~~~~--~~~~~~~~~~n~~gt~~ll~aa~~~----~--~r~v~~SS~~vYg~~~~~~~  148 (386)
T PLN02427         86 ---------MADLTINLAAICTPADY--NTRPLDTIYSNFIDALPVVKYCSEN----N--KRLIHFSTCEVYGKTIGSFL  148 (386)
T ss_pred             ---------cCCEEEEcccccChhhh--hhChHHHHHHHHHHHHHHHHHHHhc----C--CEEEEEeeeeeeCCCcCCCC
Confidence                     27999999997543211  1122345678999999998877432    2  58999999876543211 01


Q ss_pred             CCc-ccccc-c---cccC-C------CCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcccc---
Q 017812          214 NNE-TITGK-F---FLRS-K------CYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE---  278 (365)
Q Consensus       214 ~~~-~~~~~-~---~~~~-~------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~---  278 (365)
                      +.+ .+... .   ..+. .      ...+...|+.||.+.+.+++..++      ..|+.+..++|+.|-.+-...   
T Consensus       149 ~e~~p~~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~------~~g~~~~ilR~~~vyGp~~~~~~~  222 (386)
T PLN02427        149 PKDHPLRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGA------ENGLEFTIVRPFNWIGPRMDFIPG  222 (386)
T ss_pred             CcccccccccccccccccccccccCCCCccccchHHHHHHHHHHHHHHHh------hcCCceEEecccceeCCCCCcccc
Confidence            100 00000 0   0000 0      001245799999999998877654      458999999999998764321   


Q ss_pred             -------chhHHHHHHHHHH--HHh---------cCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCC-ccc
Q 017812          279 -------VPSFLSLMAFTVL--KLL---------GLLQSPEKGINSVLDAALAPPETSGVYFFGGKG-RTV  330 (365)
Q Consensus       279 -------~~~~~~~~~~~~~--~~~---------~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g-~~~  330 (365)
                             .+...........  .+.         .-+..++|+|++++.++..+....|..|...++ ++.
T Consensus       223 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~r~~i~V~Dva~ai~~al~~~~~~~g~~yni~~~~~~~  293 (386)
T PLN02427        223 IDGPSEGVPRVLACFSNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEV  293 (386)
T ss_pred             ccccccccchHHHHHHHHHhcCCCeEEECCCCceECcEeHHHHHHHHHHHHhCcccccCceEEeCCCCCCc
Confidence                   1111100000000  010         125689999999996554333345667776654 344

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.67  E-value=1.3e-14  Score=128.96  Aligned_cols=221  Identities=19%  Similarity=0.141  Sum_probs=152.6

Q ss_pred             EEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhccCC
Q 017812           62 CIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDM  141 (365)
Q Consensus        62 vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~~~  141 (365)
                      |+||||+|.||.+++++|.++|..|+.+.|+..........       .++.++.+|+.|.++++++++..         
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~-------~~~~~~~~dl~~~~~~~~~~~~~---------   64 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKK-------LNVEFVIGDLTDKEQLEKLLEKA---------   64 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHH-------TTEEEEESETTSHHHHHHHHHHH---------
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCcccccccccccccccccc-------ceEEEEEeecccccccccccccc---------
Confidence            79999999999999999999999999888877643322222       17899999999999998888753         


Q ss_pred             CCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcccccc
Q 017812          142 HSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGK  221 (365)
Q Consensus       142 ~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~~~~~  221 (365)
                        .+|.+||.||...  ...+.+.....++.|+.++..+++++...=     ..++|++||...+....         ..
T Consensus        65 --~~d~vi~~a~~~~--~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-----~~~~i~~sS~~~y~~~~---------~~  126 (236)
T PF01370_consen   65 --NIDVVIHLAAFSS--NPESFEDPEEIIEANVQGTRNLLEAAREAG-----VKRFIFLSSASVYGDPD---------GE  126 (236)
T ss_dssp             --TESEEEEEBSSSS--HHHHHHSHHHHHHHHHHHHHHHHHHHHHHT-----TSEEEEEEEGGGGTSSS---------SS
T ss_pred             --CceEEEEeecccc--cccccccccccccccccccccccccccccc-----ccccccccccccccccc---------cc
Confidence              4999999999743  111235567888899999988888886542     25999999976553321         11


Q ss_pred             ccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccc-c-chhHHHHHHHHHH--HHh---
Q 017812          222 FFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMR-E-VPSFLSLMAFTVL--KLL---  294 (365)
Q Consensus       222 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~-~-~~~~~~~~~~~~~--~~~---  294 (365)
                      .+.+..+..+...|+.+|...+.+.+.+.++      .++++..++|+.+-.+... . .............  .+.   
T Consensus       127 ~~~e~~~~~~~~~Y~~~K~~~e~~~~~~~~~------~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (236)
T PF01370_consen  127 PIDEDSPINPLSPYGASKRAAEELLRDYAKK------YGLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIP  200 (236)
T ss_dssp             SBETTSGCCHSSHHHHHHHHHHHHHHHHHHH------HTSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEE
T ss_pred             ccccccccccccccccccccccccccccccc------cccccccccccccccccccccccccccchhhHHhhcCCccccc
Confidence            1122234466677999999999999998875      3789999999999877711 1 1111111111110  000   


Q ss_pred             ------cCCCCHHHHHHHHHHHhcCCCCCcccEEe
Q 017812          295 ------GLLQSPEKGINSVLDAALAPPETSGVYFF  323 (365)
Q Consensus       295 ------~~~~~p~e~A~~i~~~~l~~~~~~G~~~~  323 (365)
                            .-+...+|+|++++.++..+. ..|..|.
T Consensus       201 ~~~~~~~~~i~v~D~a~~~~~~~~~~~-~~~~~yN  234 (236)
T PF01370_consen  201 GDGSQVRDFIHVDDLAEAIVAALENPK-AAGGIYN  234 (236)
T ss_dssp             STSSCEEEEEEHHHHHHHHHHHHHHSC-TTTEEEE
T ss_pred             CCCCCccceEEHHHHHHHHHHHHhCCC-CCCCEEE
Confidence                  123578999999997666655 4445544

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.66  E-value=1.2e-14  Score=148.65  Aligned_cols=238  Identities=13%  Similarity=0.074  Sum_probs=150.6

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHC--CCEEEEEecCc--hhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSRE--GFHVVLVGRSS--HLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  132 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~--G~~Vil~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~  132 (365)
                      .++++||||||+|.||++++++|.++  |++|+.++|..  +....    +.......++.++.+|++|.+.+..++.  
T Consensus         4 ~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~----l~~~~~~~~v~~~~~Dl~d~~~~~~~~~--   77 (668)
T PLN02260          4 YEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKN----LNPSKSSPNFKFVKGDIASADLVNYLLI--   77 (668)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhh----hhhcccCCCeEEEECCCCChHHHHHHHh--
Confidence            45789999999999999999999998  67999888753  22211    1111113468899999999887665432  


Q ss_pred             HHHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017812          133 QQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       133 ~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~  212 (365)
                               ...+|+|||+|+......  ..++....+++|+.|+..+++++...    +...++|++||...+......
T Consensus        78 ---------~~~~D~ViHlAa~~~~~~--~~~~~~~~~~~Nv~gt~~ll~a~~~~----~~vkr~I~~SS~~vyg~~~~~  142 (668)
T PLN02260         78 ---------TEGIDTIMHFAAQTHVDN--SFGNSFEFTKNNIYGTHVLLEACKVT----GQIRRFIHVSTDEVYGETDED  142 (668)
T ss_pred             ---------hcCCCEEEECCCccCchh--hhhCHHHHHHHHHHHHHHHHHHHHhc----CCCcEEEEEcchHHhCCCccc
Confidence                     145999999999753221  12233567899999999999887432    113699999998765332111


Q ss_pred             CCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHH-
Q 017812          213 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVL-  291 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~-  291 (365)
                      ....      ..+..+..+...|+.||.+.+.+++.++++      .++.+..++|+.|-.+-.... ........... 
T Consensus       143 ~~~~------~~E~~~~~p~~~Y~~sK~~aE~~v~~~~~~------~~l~~vilR~~~VyGp~~~~~-~~i~~~~~~a~~  209 (668)
T PLN02260        143 ADVG------NHEASQLLPTNPYSATKAGAEMLVMAYGRS------YGLPVITTRGNNVYGPNQFPE-KLIPKFILLAMQ  209 (668)
T ss_pred             cccC------ccccCCCCCCCCcHHHHHHHHHHHHHHHHH------cCCCEEEECcccccCcCCCcc-cHHHHHHHHHhC
Confidence            0000      001123334568999999999999887764      468899999999876643111 01111100000 


Q ss_pred             -HHh---------cCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017812          292 -KLL---------GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  330 (365)
Q Consensus       292 -~~~---------~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~  330 (365)
                       .++         .-+...+|+|++++.++ .... .|..|...++++.
T Consensus       210 g~~i~i~g~g~~~r~~ihV~Dva~a~~~~l-~~~~-~~~vyni~~~~~~  256 (668)
T PLN02260        210 GKPLPIHGDGSNVRSYLYCEDVAEAFEVVL-HKGE-VGHVYNIGTKKER  256 (668)
T ss_pred             CCCeEEecCCCceEeeEEHHHHHHHHHHHH-hcCC-CCCEEEECCCCee
Confidence             000         12357999999998544 3332 3455665555655

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.66  E-value=6.2e-15  Score=140.81  Aligned_cols=220  Identities=15%  Similarity=0.055  Sum_probs=142.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHH--HHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSE--TMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  133 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~--~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~  133 (365)
                      ..++++++||||+|+||++++++|+++|++|++++|+.++.+.  ...++...  ...+.++.+|++|.+++.++++.+.
T Consensus        57 ~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~--~~~v~~v~~Dl~d~~~l~~~~~~~~  134 (390)
T PLN02657         57 EPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKE--LPGAEVVFGDVTDADSLRKVLFSEG  134 (390)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhh--cCCceEEEeeCCCHHHHHHHHHHhC
Confidence            3568899999999999999999999999999999998765321  11222222  2367899999999999988876421


Q ss_pred             HHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          134 QWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       134 ~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                               .++|+||||+|.....       ....+++|+.++..+++++.    +.+ .+++|++||....       
T Consensus       135 ---------~~~D~Vi~~aa~~~~~-------~~~~~~vn~~~~~~ll~aa~----~~g-v~r~V~iSS~~v~-------  186 (390)
T PLN02657        135 ---------DPVDVVVSCLASRTGG-------VKDSWKIDYQATKNSLDAGR----EVG-AKHFVLLSAICVQ-------  186 (390)
T ss_pred             ---------CCCcEEEECCccCCCC-------CccchhhHHHHHHHHHHHHH----HcC-CCEEEEEeecccc-------
Confidence                     2699999999853211       12346788888888877764    333 4699999998654       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHH--HHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAF--TVL  291 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~--~~~  291 (365)
                                   .   +...|..+|...+...+.     .   ..++..+.++|+.+-.++.............  ..-
T Consensus       187 -------------~---p~~~~~~sK~~~E~~l~~-----~---~~gl~~tIlRp~~~~~~~~~~~~~~~~g~~~~~~Gd  242 (390)
T PLN02657        187 -------------K---PLLEFQRAKLKFEAELQA-----L---DSDFTYSIVRPTAFFKSLGGQVEIVKDGGPYVMFGD  242 (390)
T ss_pred             -------------C---cchHHHHHHHHHHHHHHh-----c---cCCCCEEEEccHHHhcccHHHHHhhccCCceEEecC
Confidence                         2   234588899888766543     1   4689999999987754332110000000000  000


Q ss_pred             HHhc--CCCCHHHHHHHHHHHhcCCCCCcccEEeCCC-Cccc
Q 017812          292 KLLG--LLQSPEKGINSVLDAALAPPETSGVYFFGGK-GRTV  330 (365)
Q Consensus       292 ~~~~--~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~-g~~~  330 (365)
                      ....  .+.+.+|+|..++.++..+ ...|..|...+ ++..
T Consensus       243 G~~~~~~~I~v~DlA~~i~~~~~~~-~~~~~~~~Iggp~~~~  283 (390)
T PLN02657        243 GKLCACKPISEADLASFIADCVLDE-SKINKVLPIGGPGKAL  283 (390)
T ss_pred             CcccccCceeHHHHHHHHHHHHhCc-cccCCEEEcCCCCccc
Confidence            0000  1357889999999766543 33456666544 3444

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.65  E-value=1.2e-14  Score=134.73  Aligned_cols=226  Identities=15%  Similarity=0.078  Sum_probs=140.5

Q ss_pred             EEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhccCC
Q 017812           62 CIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDM  141 (365)
Q Consensus        62 vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~~~  141 (365)
                      |+||||+|.||++++++|+++|++++++.|+.+.....            .....+|+.|..+...+.+.+.+.    ..
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~------------~~~~~~~~~d~~~~~~~~~~~~~~----~~   65 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF------------VNLVDLDIADYMDKEDFLAQIMAG----DD   65 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH------------HhhhhhhhhhhhhHHHHHHHHhcc----cc
Confidence            79999999999999999999999777776664432110            012346777766555555544320    02


Q ss_pred             CCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcccccc
Q 017812          142 HSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGK  221 (365)
Q Consensus       142 ~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~~~~~  221 (365)
                      ++++|++||+||..... ..+   -+..+++|+.++..+++++..    .+  .++|++||.+.+.......    .   
T Consensus        66 ~~~~d~Vih~A~~~~~~-~~~---~~~~~~~n~~~t~~ll~~~~~----~~--~~~i~~SS~~vyg~~~~~~----~---  128 (308)
T PRK11150         66 FGDIEAIFHEGACSSTT-EWD---GKYMMDNNYQYSKELLHYCLE----RE--IPFLYASSAATYGGRTDDF----I---  128 (308)
T ss_pred             cCCccEEEECceecCCc-CCC---hHHHHHHHHHHHHHHHHHHHH----cC--CcEEEEcchHHhCcCCCCC----C---
Confidence            35799999999965432 112   245789999999999888743    22  4799999987663321110    0   


Q ss_pred             ccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcccc---chhHHHHHHHHHH---HH--
Q 017812          222 FFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE---VPSFLSLMAFTVL---KL--  293 (365)
Q Consensus       222 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~---~~~~~~~~~~~~~---~~--  293 (365)
                        .+..+..+.+.|+.||.+.+.+++.++.+      .++.+..++|+.+-.+-...   .+...........   .+  
T Consensus       129 --~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~------~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i  200 (308)
T PRK11150        129 --EEREYEKPLNVYGYSKFLFDEYVRQILPE------ANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKL  200 (308)
T ss_pred             --ccCCCCCCCCHHHHHHHHHHHHHHHHHHH------cCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEE
Confidence              11123344568999999999988877643      47889999999887664321   1111111100000   00  


Q ss_pred             -------hcCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcccc
Q 017812          294 -------LGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  331 (365)
Q Consensus       294 -------~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~~  331 (365)
                             .+-+...+|+|++++.++ ..+ .+ ..|...+|++..
T Consensus       201 ~~g~~~~~r~~i~v~D~a~a~~~~~-~~~-~~-~~yni~~~~~~s  242 (308)
T PRK11150        201 FEGSENFKRDFVYVGDVAAVNLWFW-ENG-VS-GIFNCGTGRAES  242 (308)
T ss_pred             ecCCCceeeeeeeHHHHHHHHHHHH-hcC-CC-CeEEcCCCCcee
Confidence                   112358899999988554 332 23 466766677653

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.65  E-value=1.7e-14  Score=133.98  Aligned_cols=225  Identities=15%  Similarity=0.052  Sum_probs=141.2

Q ss_pred             EEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhccC
Q 017812           62 CIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  140 (365)
Q Consensus        62 vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~~  140 (365)
                      |+||||+|.||.+++++|.++|+ .|++++|..... .. .++       ....+..|+++.+.++.+.+.         
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~-~~~-------~~~~~~~d~~~~~~~~~~~~~---------   62 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KF-LNL-------ADLVIADYIDKEDFLDRLEKG---------   62 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hh-hhh-------hheeeeccCcchhHHHHHHhh---------
Confidence            68999999999999999999998 788887754321 11 111       113466788887666554432         


Q ss_pred             CCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCccccc
Q 017812          141 MHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITG  220 (365)
Q Consensus       141 ~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~~~~  220 (365)
                      ...++|++||+||....    +.++.+..+++|+.++..+++++...    +  .++|++||...+.........+    
T Consensus        63 ~~~~~D~vvh~A~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~~~----~--~~~v~~SS~~vy~~~~~~~~e~----  128 (314)
T TIGR02197        63 AFGKIEAIFHQGACSDT----TETDGEYMMENNYQYSKRLLDWCAEK----G--IPFIYASSAATYGDGEAGFREG----  128 (314)
T ss_pred             ccCCCCEEEECccccCc----cccchHHHHHHHHHHHHHHHHHHHHh----C--CcEEEEccHHhcCCCCCCcccc----
Confidence            12569999999997432    23345778999999999999987542    2  4899999977653221111111    


Q ss_pred             cccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcccc---chhHHHHHHHHHH-----H
Q 017812          221 KFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE---VPSFLSLMAFTVL-----K  292 (365)
Q Consensus       221 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~---~~~~~~~~~~~~~-----~  292 (365)
                           ..+..+...|+.||.+.+.+++....+.    ..++.+..+.|+.+-.+-...   .............     .
T Consensus       129 -----~~~~~p~~~Y~~sK~~~e~~~~~~~~~~----~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (314)
T TIGR02197       129 -----RELERPLNVYGYSKFLFDQYVRRRVLPE----ALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVK  199 (314)
T ss_pred             -----cCcCCCCCHHHHHHHHHHHHHHHHhHhh----ccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeE
Confidence                 0112346689999999999987643322    346788888998886654211   1111101000000     0


Q ss_pred             H------h------cCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017812          293 L------L------GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  330 (365)
Q Consensus       293 ~------~------~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~  330 (365)
                      .      .      .-+...+|+|++++.++..  . .+..|...+++++
T Consensus       200 ~~~~~~~~~~g~~~~~~i~v~D~a~~i~~~~~~--~-~~~~yni~~~~~~  246 (314)
T TIGR02197       200 LFKSSEGFKDGEQLRDFVYVKDVVDVNLWLLEN--G-VSGIFNLGTGRAR  246 (314)
T ss_pred             EecCccccCCCCceeeeEEHHHHHHHHHHHHhc--c-cCceEEcCCCCCc
Confidence            0      0      1246799999999965544  2 3446666666666

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.64  E-value=4e-14  Score=129.84  Aligned_cols=207  Identities=15%  Similarity=0.129  Sum_probs=134.1

Q ss_pred             EEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhccCC
Q 017812           62 CIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDM  141 (365)
Q Consensus        62 vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~~~  141 (365)
                      ++||||||.||.+++++|.++|++|++++|+                       .+|+.+.++++++++.          
T Consensus         2 ilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~-----------------------~~d~~~~~~~~~~~~~----------   48 (287)
T TIGR01214         2 ILITGANGQLGRELVQQLSPEGRVVVALTSS-----------------------QLDLTDPEALERLLRA----------   48 (287)
T ss_pred             EEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc-----------------------ccCCCCHHHHHHHHHh----------
Confidence            7999999999999999999999999999884                       4799998888777653          


Q ss_pred             CCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcccccc
Q 017812          142 HSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGK  221 (365)
Q Consensus       142 ~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~~~~~  221 (365)
                       ..+|++||+||......  .....+..+++|+.++..+++++..    .+  .++|++||...+......         
T Consensus        49 -~~~d~vi~~a~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~----~~--~~~v~~Ss~~vy~~~~~~---------  110 (287)
T TIGR01214        49 -IRPDAVVNTAAYTDVDG--AESDPEKAFAVNALAPQNLARAAAR----HG--ARLVHISTDYVFDGEGKR---------  110 (287)
T ss_pred             -CCCCEEEECCccccccc--cccCHHHHHHHHHHHHHHHHHHHHH----cC--CeEEEEeeeeeecCCCCC---------
Confidence             24899999999753211  1233567889999999999998743    22  489999997655321110         


Q ss_pred             ccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccc-cchh-HHHHHHHH-HHH----Hh
Q 017812          222 FFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMR-EVPS-FLSLMAFT-VLK----LL  294 (365)
Q Consensus       222 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~-~~~~-~~~~~~~~-~~~----~~  294 (365)
                      .+.+..+..+...|+.+|.+.+.+++.+          +..++.++|+.+-.+... .... ........ ...    ..
T Consensus       111 ~~~E~~~~~~~~~Y~~~K~~~E~~~~~~----------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (287)
T TIGR01214       111 PYREDDATNPLNVYGQSKLAGEQAIRAA----------GPNALIVRTSWLYGGGGGRNFVRTMLRLAGRGEELRVVDDQI  180 (287)
T ss_pred             CCCCCCCCCCcchhhHHHHHHHHHHHHh----------CCCeEEEEeeecccCCCCCCHHHHHHHHhhcCCCceEecCCC
Confidence            0111123344568999999988777544          236789999999776531 1111 00000000 000    00


Q ss_pred             cCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017812          295 GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  330 (365)
Q Consensus       295 ~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~  330 (365)
                      .-+...+|+|++++.++...+..+|.|-. .++.++
T Consensus       181 ~~~v~v~Dva~a~~~~~~~~~~~~~~~ni-~~~~~~  215 (287)
T TIGR01214       181 GSPTYAKDLARVIAALLQRLARARGVYHL-ANSGQC  215 (287)
T ss_pred             cCCcCHHHHHHHHHHHHhhccCCCCeEEE-ECCCCc
Confidence            12345799999999765443334454444 344444

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.62  E-value=1e-13  Score=130.77  Aligned_cols=230  Identities=9%  Similarity=0.075  Sum_probs=143.6

Q ss_pred             CEEEEecCCChHHHHHHHHHHHC-CCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCC-ChhhHHHHHHHHHHHHh
Q 017812           60 PVCIVTGATSGLGAAAAYALSRE-GFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS-SFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~-G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls-~~~~v~~~~~~~~~~~~  137 (365)
                      ++|+||||+|.||.+++++|++. |++|++++|+.+....    +   .+...+.++.+|++ +.+.+.+++        
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~----~---~~~~~~~~~~~Dl~~~~~~~~~~~--------   66 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGD----L---VNHPRMHFFEGDITINKEWIEYHV--------   66 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHH----h---ccCCCeEEEeCCCCCCHHHHHHHH--------
Confidence            46999999999999999999986 6999999987643321    1   11235889999998 555443332        


Q ss_pred             ccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc-cCCCc
Q 017812          138 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA-QVNNE  216 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~-~~~~~  216 (365)
                           .++|++||.|+...+..  ..++.+..+++|+.++..+++++..    .+  .++|++||...+..... ...++
T Consensus        67 -----~~~d~ViH~aa~~~~~~--~~~~p~~~~~~n~~~~~~ll~aa~~----~~--~~~v~~SS~~vyg~~~~~~~~ee  133 (347)
T PRK11908         67 -----KKCDVILPLVAIATPAT--YVKQPLRVFELDFEANLPIVRSAVK----YG--KHLVFPSTSEVYGMCPDEEFDPE  133 (347)
T ss_pred             -----cCCCEEEECcccCChHH--hhcCcHHHHHHHHHHHHHHHHHHHh----cC--CeEEEEecceeeccCCCcCcCcc
Confidence                 24899999999754321  1223456789999999998887753    22  59999999876532211 11111


Q ss_pred             cccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcccc-------chhHHHHHHHH
Q 017812          217 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE-------VPSFLSLMAFT  289 (365)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~-------~~~~~~~~~~~  289 (365)
                      ..   .........+...|+.||.+.+.+.+.++.+      .++.+..+.|+.+..+....       ...........
T Consensus       134 ~~---~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~------~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~  204 (347)
T PRK11908        134 AS---PLVYGPINKPRWIYACSKQLMDRVIWAYGME------EGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGH  204 (347)
T ss_pred             cc---ccccCcCCCccchHHHHHHHHHHHHHHHHHH------cCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHH
Confidence            00   0000001123457999999999998887753      46788889998886654211       00011010000


Q ss_pred             H--HH---------HhcCCCCHHHHHHHHHHHhcCCCC-CcccEEeCCC
Q 017812          290 V--LK---------LLGLLQSPEKGINSVLDAALAPPE-TSGVYFFGGK  326 (365)
Q Consensus       290 ~--~~---------~~~~~~~p~e~A~~i~~~~l~~~~-~~G~~~~~~~  326 (365)
                      .  ..         ..+-+...+|+|++++.++...+. ..|..|...+
T Consensus       205 ~~~~~~~~~~~~g~~~r~~i~v~D~a~a~~~~~~~~~~~~~g~~yni~~  253 (347)
T PRK11908        205 IVRGEPISLVDGGSQKRAFTDIDDGIDALMKIIENKDGVASGKIYNIGN  253 (347)
T ss_pred             HhCCCceEEecCCceeeccccHHHHHHHHHHHHhCccccCCCCeEEeCC
Confidence            0  00         111357999999999976554332 4466665544

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.61  E-value=1.2e-13  Score=131.33  Aligned_cols=234  Identities=14%  Similarity=0.048  Sum_probs=146.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      ++++|+||||+|.||.+++++|.++|++|++++|.....      +...  .....++.+|++|.+++..+++       
T Consensus        20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~------~~~~--~~~~~~~~~Dl~d~~~~~~~~~-------   84 (370)
T PLN02695         20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEH------MSED--MFCHEFHLVDLRVMENCLKVTK-------   84 (370)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccc------cccc--cccceEEECCCCCHHHHHHHHh-------
Confidence            578999999999999999999999999999999864321      0000  1124678899999877655432       


Q ss_pred             ccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcc
Q 017812          138 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNET  217 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~  217 (365)
                            .+|++||.|+....... ........+..|+.++..+++++...    + ..++|++||...+.......+...
T Consensus        85 ------~~D~Vih~Aa~~~~~~~-~~~~~~~~~~~N~~~t~nll~aa~~~----~-vk~~V~~SS~~vYg~~~~~~~~~~  152 (370)
T PLN02695         85 ------GVDHVFNLAADMGGMGF-IQSNHSVIMYNNTMISFNMLEAARIN----G-VKRFFYASSACIYPEFKQLETNVS  152 (370)
T ss_pred             ------CCCEEEEcccccCCccc-cccCchhhHHHHHHHHHHHHHHHHHh----C-CCEEEEeCchhhcCCccccCcCCC
Confidence                  38999999986532111 11123456788999999999887432    2 359999999876532211000000


Q ss_pred             ccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcccc------chhHHHHHHHHHH
Q 017812          218 ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE------VPSFLSLMAFTVL  291 (365)
Q Consensus       218 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~------~~~~~~~~~~~~~  291 (365)
                      ...   ....+..+.+.|+.+|.+.+.+++..+..      .|+.+..++|+.+-.|-...      .+...........
T Consensus       153 ~~E---~~~~p~~p~s~Yg~sK~~~E~~~~~~~~~------~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~  223 (370)
T PLN02695        153 LKE---SDAWPAEPQDAYGLEKLATEELCKHYTKD------FGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTST  223 (370)
T ss_pred             cCc---ccCCCCCCCCHHHHHHHHHHHHHHHHHHH------hCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCC
Confidence            100   00124456679999999999999887653      57899999999998774211      1111100000000


Q ss_pred             HHh---------cCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017812          292 KLL---------GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  330 (365)
Q Consensus       292 ~~~---------~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~  330 (365)
                      .+.         .-+...+|++++++.+. ..+ . +..|...+++++
T Consensus       224 ~~i~~~g~g~~~r~~i~v~D~a~ai~~~~-~~~-~-~~~~nv~~~~~~  268 (370)
T PLN02695        224 DEFEMWGDGKQTRSFTFIDECVEGVLRLT-KSD-F-REPVNIGSDEMV  268 (370)
T ss_pred             CCeEEeCCCCeEEeEEeHHHHHHHHHHHH-hcc-C-CCceEecCCCce
Confidence            011         12468899999998643 332 2 344555555555

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.60  E-value=1.4e-13  Score=133.31  Aligned_cols=231  Identities=15%  Similarity=0.048  Sum_probs=144.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      +++.|+||||+|.||.+++++|.++|++|++++|......+   .+.......++.++..|+.+..     +        
T Consensus       118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~---~~~~~~~~~~~~~i~~D~~~~~-----l--------  181 (442)
T PLN02206        118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKE---NVMHHFSNPNFELIRHDVVEPI-----L--------  181 (442)
T ss_pred             CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchh---hhhhhccCCceEEEECCccChh-----h--------
Confidence            57899999999999999999999999999999876432211   1111112346778888886642     1        


Q ss_pred             ccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcc
Q 017812          138 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNET  217 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~  217 (365)
                           ..+|+|||.|+...+...  .++.+..+++|+.++..+++++...    +  .++|++||...+.........++
T Consensus       182 -----~~~D~ViHlAa~~~~~~~--~~~p~~~~~~Nv~gt~nLleaa~~~----g--~r~V~~SS~~VYg~~~~~p~~E~  248 (442)
T PLN02206        182 -----LEVDQIYHLACPASPVHY--KFNPVKTIKTNVVGTLNMLGLAKRV----G--ARFLLTSTSEVYGDPLQHPQVET  248 (442)
T ss_pred             -----cCCCEEEEeeeecchhhh--hcCHHHHHHHHHHHHHHHHHHHHHh----C--CEEEEECChHHhCCCCCCCCCcc
Confidence                 138999999997543221  1234678999999999999988543    2  48999999876633211111110


Q ss_pred             ccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc-hhHHHHHHHHHH--HH-
Q 017812          218 ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV-PSFLSLMAFTVL--KL-  293 (365)
Q Consensus       218 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~-~~~~~~~~~~~~--~~-  293 (365)
                      .    .....+..+.+.|+.||.+.+.+++.+.+.      .++.+..+.|+.+-.+..... ............  .+ 
T Consensus       249 ~----~~~~~P~~~~s~Y~~SK~~aE~~~~~y~~~------~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i  318 (442)
T PLN02206        249 Y----WGNVNPIGVRSCYDEGKRTAETLTMDYHRG------ANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPL  318 (442)
T ss_pred             c----cccCCCCCccchHHHHHHHHHHHHHHHHHH------hCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCc
Confidence            0    000123444678999999999988877553      468888899888876542110 001101000000  00 


Q ss_pred             --h------cCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017812          294 --L------GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  330 (365)
Q Consensus       294 --~------~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~  330 (365)
                        .      .-+...+|+|++++.++. .+ ..| .|...+++.+
T Consensus       319 ~i~g~G~~~rdfi~V~Dva~ai~~a~e-~~-~~g-~yNIgs~~~~  360 (442)
T PLN02206        319 TVYGDGKQTRSFQFVSDLVEGLMRLME-GE-HVG-PFNLGNPGEF  360 (442)
T ss_pred             EEeCCCCEEEeEEeHHHHHHHHHHHHh-cC-CCc-eEEEcCCCce
Confidence              0      124679999999986543 22 344 5665555555

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.60  E-value=1.9e-13  Score=126.83  Aligned_cols=221  Identities=17%  Similarity=0.102  Sum_probs=144.6

Q ss_pred             EEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhccCC
Q 017812           62 CIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDM  141 (365)
Q Consensus        62 vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~~~  141 (365)
                      ||||||+|.||.+++++|.++|++|+.++|.........         ..+.++.+|+++.+.+.+..+           
T Consensus         3 ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---------~~~~~~~~d~~~~~~~~~~~~-----------   62 (314)
T COG0451           3 ILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL---------SGVEFVVLDLTDRDLVDELAK-----------   62 (314)
T ss_pred             EEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc---------cccceeeecccchHHHHHHHh-----------
Confidence            999999999999999999999999999999876433211         356789999999854444332           


Q ss_pred             CCCe-eEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc--cCCCccc
Q 017812          142 HSSI-QLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA--QVNNETI  218 (365)
Q Consensus       142 ~~~i-d~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~--~~~~~~~  218 (365)
                        .. |++||+|+.......... ..+..+++|+.++..+++++..    .+ ..++|+.||.+.......  ..+.+. 
T Consensus        63 --~~~d~vih~aa~~~~~~~~~~-~~~~~~~~nv~gt~~ll~aa~~----~~-~~~~v~~ss~~~~~~~~~~~~~~E~~-  133 (314)
T COG0451          63 --GVPDAVIHLAAQSSVPDSNAS-DPAEFLDVNVDGTLNLLEAARA----AG-VKRFVFASSVSVVYGDPPPLPIDEDL-  133 (314)
T ss_pred             --cCCCEEEEccccCchhhhhhh-CHHHHHHHHHHHHHHHHHHHHH----cC-CCeEEEeCCCceECCCCCCCCccccc-
Confidence              13 999999998654333222 4567899999999999999976    22 468999777665532200  111110 


Q ss_pred             cccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc-hh-HHHH-HH-HHHHHH-
Q 017812          219 TGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV-PS-FLSL-MA-FTVLKL-  293 (365)
Q Consensus       219 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~-~~-~~~~-~~-~~~~~~-  293 (365)
                              .+..+...|+.||.+.+.+++..+.+      .|+.+..+.|+.+-.|..... +. .... .. .....+ 
T Consensus       134 --------~~~~p~~~Yg~sK~~~E~~~~~~~~~------~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~  199 (314)
T COG0451         134 --------GPPRPLNPYGVSKLAAEQLLRAYARL------YGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPI  199 (314)
T ss_pred             --------CCCCCCCHHHHHHHHHHHHHHHHHHH------hCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCc
Confidence                    12222238999999999999888872      578999999998876554322 11 1111 10 110111 


Q ss_pred             --hc-------CCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCc
Q 017812          294 --LG-------LLQSPEKGINSVLDAALAPPETSGVYFFGGKGR  328 (365)
Q Consensus       294 --~~-------~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~  328 (365)
                        ..       -+...+|+|++++.++-.+...   .|...++.
T Consensus       200 ~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~---~~ni~~~~  240 (314)
T COG0451         200 IVIGGDGSQTRDFVYVDDVADALLLALENPDGG---VFNIGSGT  240 (314)
T ss_pred             ceEeCCCceeEeeEeHHHHHHHHHHHHhCCCCc---EEEeCCCC
Confidence              10       1345899999999544433332   66655554

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.59  E-value=5.8e-14  Score=124.05  Aligned_cols=168  Identities=13%  Similarity=0.119  Sum_probs=126.8

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhcc
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  139 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~  139 (365)
                      +++|||||.|-||.+++.+|++.|++|++++.-...-.+.+...       ...+++.|+.|.+.+++++++        
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~-------~~~f~~gDi~D~~~L~~vf~~--------   65 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKL-------QFKFYEGDLLDRALLTAVFEE--------   65 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhc-------cCceEEeccccHHHHHHHHHh--------
Confidence            36999999999999999999999999999998655444433332       167999999999998888875        


Q ss_pred             CCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcccc
Q 017812          140 DMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETIT  219 (365)
Q Consensus       140 ~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~~~  219 (365)
                         .+||.+||-||...-  ..+.+.--+-++.|+.|+..|++++..+-     ..+|||-||.+-+..+..        
T Consensus        66 ---~~idaViHFAa~~~V--gESv~~Pl~Yy~NNv~gTl~Ll~am~~~g-----v~~~vFSStAavYG~p~~--------  127 (329)
T COG1087          66 ---NKIDAVVHFAASISV--GESVQNPLKYYDNNVVGTLNLIEAMLQTG-----VKKFIFSSTAAVYGEPTT--------  127 (329)
T ss_pred             ---cCCCEEEECcccccc--chhhhCHHHHHhhchHhHHHHHHHHHHhC-----CCEEEEecchhhcCCCCC--------
Confidence               469999999997432  22345556789999999999998886553     458888888776644322        


Q ss_pred             ccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEec
Q 017812          220 GKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  267 (365)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~  267 (365)
                       ....+..+..+.++|+.||.+.+...+.+++.      .+.++.+++
T Consensus       128 -~PI~E~~~~~p~NPYG~sKlm~E~iL~d~~~a------~~~~~v~LR  168 (329)
T COG1087         128 -SPISETSPLAPINPYGRSKLMSEEILRDAAKA------NPFKVVILR  168 (329)
T ss_pred             -cccCCCCCCCCCCcchhHHHHHHHHHHHHHHh------CCCcEEEEE
Confidence             11222356667889999999999999998874      346666554

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.59  E-value=2e-13  Score=139.08  Aligned_cols=234  Identities=11%  Similarity=0.088  Sum_probs=149.9

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHC-CCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhh-HHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSRE-GFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQS-VLKFKDSLQQ  134 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~-G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~-v~~~~~~~~~  134 (365)
                      .++++|+||||+|.||.+++++|.++ |++|+.++|+......    .   ....++.++.+|++|.++ +++++     
T Consensus       313 ~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~----~---~~~~~~~~~~gDl~d~~~~l~~~l-----  380 (660)
T PRK08125        313 KRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISR----F---LGHPRFHFVEGDISIHSEWIEYHI-----  380 (660)
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhh----h---cCCCceEEEeccccCcHHHHHHHh-----
Confidence            45789999999999999999999986 7999999997653221    1   112367889999998654 22222     


Q ss_pred             HHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc-cC
Q 017812          135 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA-QV  213 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~-~~  213 (365)
                              ..+|++||.|+...+...  .+..+..+++|+.++..+++++...    +  .++|++||...+..... ..
T Consensus       381 --------~~~D~ViHlAa~~~~~~~--~~~~~~~~~~Nv~~t~~ll~a~~~~----~--~~~V~~SS~~vyg~~~~~~~  444 (660)
T PRK08125        381 --------KKCDVVLPLVAIATPIEY--TRNPLRVFELDFEENLKIIRYCVKY----N--KRIIFPSTSEVYGMCTDKYF  444 (660)
T ss_pred             --------cCCCEEEECccccCchhh--ccCHHHHHHhhHHHHHHHHHHHHhc----C--CeEEEEcchhhcCCCCCCCc
Confidence                    248999999998654221  1223567899999999999988643    2  48999999876632211 11


Q ss_pred             CCccccccccccCCCC-ChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccch-------hHHHH
Q 017812          214 NNETITGKFFLRSKCY-PCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP-------SFLSL  285 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~-~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~-------~~~~~  285 (365)
                      +++....    ...+. .+.+.|+.||.+.+.+++..+++      .|+++..++|+.+..|-.....       .....
T Consensus       445 ~E~~~~~----~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~------~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~  514 (660)
T PRK08125        445 DEDTSNL----IVGPINKQRWIYSVSKQLLDRVIWAYGEK------EGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQ  514 (660)
T ss_pred             Ccccccc----ccCCCCCCccchHHHHHHHHHHHHHHHHh------cCCceEEEEEceeeCCCccccccccccccchHHH
Confidence            1110000    00111 23467999999999999887654      4789999999999876422100       00001


Q ss_pred             HHHHHH--HH---------hcCCCCHHHHHHHHHHHhcCCC-CCcccEEeCCCCc
Q 017812          286 MAFTVL--KL---------LGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKGR  328 (365)
Q Consensus       286 ~~~~~~--~~---------~~~~~~p~e~A~~i~~~~l~~~-~~~G~~~~~~~g~  328 (365)
                      ......  .+         .+-+...+|+|++++.++..++ ...|..|...+|+
T Consensus       515 ~i~~~~~~~~i~~~g~g~~~rd~i~v~Dva~a~~~~l~~~~~~~~g~iyni~~~~  569 (660)
T PRK08125        515 LILNLVEGSPIKLVDGGKQKRCFTDIRDGIEALFRIIENKDNRCDGQIINIGNPD  569 (660)
T ss_pred             HHHHhcCCCCeEEeCCCceeeceeeHHHHHHHHHHHHhccccccCCeEEEcCCCC
Confidence            000000  01         0124679999999986554432 2357777766664

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.57  E-value=2.4e-13  Score=125.56  Aligned_cols=157  Identities=13%  Similarity=0.025  Sum_probs=112.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhccC
Q 017812           61 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  140 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~~  140 (365)
                      +||||||+|.||.+++++|.++| +|+.++|...                   .+..|++|.+.+.++++.         
T Consensus         2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~-------------------~~~~Dl~d~~~~~~~~~~---------   52 (299)
T PRK09987          2 NILLFGKTGQVGWELQRALAPLG-NLIALDVHST-------------------DYCGDFSNPEGVAETVRK---------   52 (299)
T ss_pred             eEEEECCCCHHHHHHHHHhhccC-CEEEeccccc-------------------cccCCCCCHHHHHHHHHh---------
Confidence            59999999999999999999999 7888887521                   245799999988776653         


Q ss_pred             CCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCccccc
Q 017812          141 MHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITG  220 (365)
Q Consensus       141 ~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~~~~  220 (365)
                        .++|++||+|+.....  ...++-+..+++|+.++..+++++...    +  .++|++||...+......        
T Consensus        53 --~~~D~Vih~Aa~~~~~--~~~~~~~~~~~~N~~~~~~l~~aa~~~----g--~~~v~~Ss~~Vy~~~~~~--------  114 (299)
T PRK09987         53 --IRPDVIVNAAAHTAVD--KAESEPEFAQLLNATSVEAIAKAANEV----G--AWVVHYSTDYVFPGTGDI--------  114 (299)
T ss_pred             --cCCCEEEECCccCCcc--hhhcCHHHHHHHHHHHHHHHHHHHHHc----C--CeEEEEccceEECCCCCC--------
Confidence              2489999999975432  122234567889999999999887543    2  489999997765332110        


Q ss_pred             cccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCc
Q 017812          221 KFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNI  275 (365)
Q Consensus       221 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~  275 (365)
                       .+.+..+..+...|+.||.+.+.+++...       .   ....++|+++-.|-
T Consensus       115 -p~~E~~~~~P~~~Yg~sK~~~E~~~~~~~-------~---~~~ilR~~~vyGp~  158 (299)
T PRK09987        115 -PWQETDATAPLNVYGETKLAGEKALQEHC-------A---KHLIFRTSWVYAGK  158 (299)
T ss_pred             -CcCCCCCCCCCCHHHHHHHHHHHHHHHhC-------C---CEEEEecceecCCC
Confidence             01111344556789999999988875542       1   23778888887653

>PLN02996 fatty acyl-CoA reductase

Probab=99.55  E-value=4.8e-13  Score=131.29  Aligned_cols=247  Identities=14%  Similarity=0.167  Sum_probs=148.5

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCC---CEEEEEecCchh---HHHHHHHH---------HhhcC-------CCceEE
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREG---FHVVLVGRSSHL---LSETMADI---------TSRNK-------DARLEA  114 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G---~~Vil~~r~~~~---~~~~~~~l---------~~~~~-------~~~~~~  114 (365)
                      ++||+|+||||||.||..++.+|++.+   .+|++..|....   .+.+..++         .+..+       ..++++
T Consensus         9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~   88 (491)
T PLN02996          9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP   88 (491)
T ss_pred             hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence            579999999999999999999999865   378999986531   11211121         11111       157899


Q ss_pred             EEecCCChh----hHHHHHHHHHHHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhc
Q 017812          115 FQVDLSSFQ----SVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKN  190 (365)
Q Consensus       115 ~~~Dls~~~----~v~~~~~~~~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~  190 (365)
                      +..|+++++    + ....+.+.         ..+|++||+|+.....     +..+..+++|+.|+..+++++...-  
T Consensus        89 i~GDl~~~~LGLs~-~~~~~~l~---------~~vD~ViH~AA~v~~~-----~~~~~~~~~Nv~gt~~ll~~a~~~~--  151 (491)
T PLN02996         89 VPGDISYDDLGVKD-SNLREEMW---------KEIDIVVNLAATTNFD-----ERYDVALGINTLGALNVLNFAKKCV--  151 (491)
T ss_pred             EecccCCcCCCCCh-HHHHHHHH---------hCCCEEEECccccCCc-----CCHHHHHHHHHHHHHHHHHHHHhcC--
Confidence            999998542    1 11122222         2489999999976421     2467789999999999999885431  


Q ss_pred             CCCCCeEEEEcCCcccccccccCCCcccc---------------------------------ccc---------cccCCC
Q 017812          191 SPVPSRIVNVTSFTHRNVFNAQVNNETIT---------------------------------GKF---------FLRSKC  228 (365)
Q Consensus       191 ~~~~g~iV~vsS~~~~~~~~~~~~~~~~~---------------------------------~~~---------~~~~~~  228 (365)
                       + ..++|++||...++.....+++....                                 ...         ..+...
T Consensus       152 -~-~k~~V~vST~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (491)
T PLN02996        152 -K-VKMLLHVSTAYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKL  229 (491)
T ss_pred             -C-CCeEEEEeeeEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHh
Confidence             1 35899999987664322111100000                                 000         000001


Q ss_pred             CChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHH----HH---HHHHH--------
Q 017812          229 YPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLM----AF---TVLKL--------  293 (365)
Q Consensus       229 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~----~~---~~~~~--------  293 (365)
                      ......|+.||++.+.+++..    +    .++.+..++|+.|..+.....+.+....    ..   .....        
T Consensus       230 ~~~pn~Y~~TK~~aE~lv~~~----~----~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg  301 (491)
T PLN02996        230 HGWPNTYVFTKAMGEMLLGNF----K----ENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADP  301 (491)
T ss_pred             CCCCCchHhhHHHHHHHHHHh----c----CCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCC
Confidence            122347999999999888543    2    3799999999999776543333221111    00   00000        


Q ss_pred             --hcCCCCHHHHHHHHHHHhcCC--CCCcccEEeCCCC--ccc
Q 017812          294 --LGLLQSPEKGINSVLDAALAP--PETSGVYFFGGKG--RTV  330 (365)
Q Consensus       294 --~~~~~~p~e~A~~i~~~~l~~--~~~~G~~~~~~~g--~~~  330 (365)
                        ..-+..+++++++++.++...  ....+..|....|  ++.
T Consensus       302 ~~~~D~v~Vddvv~a~l~a~~~~~~~~~~~~vYNi~s~~~~~~  344 (491)
T PLN02996        302 NSVLDVIPADMVVNAMIVAMAAHAGGQGSEIIYHVGSSLKNPV  344 (491)
T ss_pred             CeecceecccHHHHHHHHHHHHhhccCCCCcEEEecCCCCCcc
Confidence              012457899999998655432  1234667776766  554

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.55  E-value=8.7e-13  Score=127.57  Aligned_cols=230  Identities=15%  Similarity=0.078  Sum_probs=144.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      +.++|+||||+|.||.+++++|.++|++|++++|...........+   ....++.++..|+.+..        +     
T Consensus       119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~---~~~~~~~~~~~Di~~~~--------~-----  182 (436)
T PLN02166        119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHL---FGNPRFELIRHDVVEPI--------L-----  182 (436)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhh---ccCCceEEEECcccccc--------c-----
Confidence            4568999999999999999999999999999998643211111111   11235778888886531        1     


Q ss_pred             ccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc-cCCCc
Q 017812          138 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA-QVNNE  216 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~-~~~~~  216 (365)
                           .++|+|||.|+...+...  ..+-+..+++|+.|+..+++++...    +  .++|++||.+.+..... ..+.+
T Consensus       183 -----~~~D~ViHlAa~~~~~~~--~~~p~~~~~~Nv~gT~nLleaa~~~----g--~r~V~~SS~~VYg~~~~~p~~E~  249 (436)
T PLN02166        183 -----LEVDQIYHLACPASPVHY--KYNPVKTIKTNVMGTLNMLGLAKRV----G--ARFLLTSTSEVYGDPLEHPQKET  249 (436)
T ss_pred             -----cCCCEEEECceeccchhh--ccCHHHHHHHHHHHHHHHHHHHHHh----C--CEEEEECcHHHhCCCCCCCCCcc
Confidence                 248999999997543221  1233578999999999999888543    2  48999999876643211 11111


Q ss_pred             cccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccc----c-chhHHHHHHH-HH
Q 017812          217 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMR----E-VPSFLSLMAF-TV  290 (365)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~----~-~~~~~~~~~~-~~  290 (365)
                      .     +....+..+...|+.||.+.+.+++..++.      .++.+..+.|+.+-.+-..    . ++........ ..
T Consensus       250 ~-----~~~~~p~~p~s~Yg~SK~~aE~~~~~y~~~------~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~  318 (436)
T PLN02166        250 Y-----WGNVNPIGERSCYDEGKRTAETLAMDYHRG------AGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQP  318 (436)
T ss_pred             c-----cccCCCCCCCCchHHHHHHHHHHHHHHHHH------hCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCC
Confidence            0     001124445678999999999999887653      4688888999888766421    1 1111111100 00


Q ss_pred             HHH------hcCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017812          291 LKL------LGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  330 (365)
Q Consensus       291 ~~~------~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~  330 (365)
                      ...      ..-+...+|+|++++.++. .+ ..| .|....++.+
T Consensus       319 i~v~g~g~~~rdfi~V~Dva~ai~~~~~-~~-~~g-iyNIgs~~~~  361 (436)
T PLN02166        319 MTVYGDGKQTRSFQYVSDLVDGLVALME-GE-HVG-PFNLGNPGEF  361 (436)
T ss_pred             cEEeCCCCeEEeeEEHHHHHHHHHHHHh-cC-CCc-eEEeCCCCcE
Confidence            000      1125689999999986543 32 345 5555556655

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.55  E-value=4.2e-13  Score=123.89  Aligned_cols=253  Identities=16%  Similarity=0.074  Sum_probs=162.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCC--CEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREG--FHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G--~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      ++.+++||||+|.+|++++.+|.+++  .+|.+++..+.... ..++.... ....+.++++|+.|..++...++     
T Consensus         3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~-~~~e~~~~-~~~~v~~~~~D~~~~~~i~~a~~-----   75 (361)
T KOG1430|consen    3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSN-LPAELTGF-RSGRVTVILGDLLDANSISNAFQ-----   75 (361)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccc-cchhhhcc-cCCceeEEecchhhhhhhhhhcc-----
Confidence            57899999999999999999999999  68999988764211 11111111 25688999999999888776543     


Q ss_pred             HhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCC
Q 017812          136 LLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNN  215 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~  215 (365)
                              +. .+||+|....+  ..-..+-+..+++|+.|+-.+.+.+...-     ..++|++||..-........+.
T Consensus        76 --------~~-~Vvh~aa~~~~--~~~~~~~~~~~~vNV~gT~nvi~~c~~~~-----v~~lIYtSs~~Vvf~g~~~~n~  139 (361)
T KOG1430|consen   76 --------GA-VVVHCAASPVP--DFVENDRDLAMRVNVNGTLNVIEACKELG-----VKRLIYTSSAYVVFGGEPIING  139 (361)
T ss_pred             --------Cc-eEEEeccccCc--cccccchhhheeecchhHHHHHHHHHHhC-----CCEEEEecCceEEeCCeecccC
Confidence                    34 45555554222  22222567889999999888888875542     4699999998765322211111


Q ss_pred             ccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHh-
Q 017812          216 ETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLL-  294 (365)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~-  294 (365)
                            ....+.|......|+.||+-.+.+++..+.      ..+...++++|-.|-.|--+...+............. 
T Consensus       140 ------~E~~p~p~~~~d~Y~~sKa~aE~~Vl~an~------~~~l~T~aLR~~~IYGpgd~~~~~~i~~~~~~g~~~f~  207 (361)
T KOG1430|consen  140 ------DESLPYPLKHIDPYGESKALAEKLVLEANG------SDDLYTCALRPPGIYGPGDKRLLPKIVEALKNGGFLFK  207 (361)
T ss_pred             ------CCCCCCccccccccchHHHHHHHHHHHhcC------CCCeeEEEEccccccCCCCccccHHHHHHHHccCceEE
Confidence                  111113333446999999988888766652      4678999999999988876654333322221111110 


Q ss_pred             -------cCCCCHHHHHHHHHHH---hc-CCCCCcccEEeCCCCccccCCcccCCHHHHHHHHHHHHHhhhccCC
Q 017812          295 -------GLLQSPEKGINSVLDA---AL-APPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFINSQL  358 (365)
Q Consensus       295 -------~~~~~p~e~A~~i~~~---~l-~~~~~~G~~~~~~~g~~~~~~~~~~d~~~~~~lw~~~~~~~~~~~~  358 (365)
                             .-+...+.+|.+.+-+   +. .++..+|+.|+.++|+++             +.|+....+....|.
T Consensus       208 ~g~~~~~~~~~~~~Nva~ahilA~~aL~~~~~~~~Gq~yfI~d~~p~-------------~~~~~~~~l~~~lg~  269 (361)
T KOG1430|consen  208 IGDGENLNDFTYGENVAWAHILAARALLDKSPSVNGQFYFITDDTPV-------------RFFDFLSPLVKALGY  269 (361)
T ss_pred             eeccccccceEEechhHHHHHHHHHHHHhcCCccCceEEEEeCCCcc-------------hhhHHHHHHHHhcCC
Confidence                   0122344455544422   22 456789999999999999             567766666655544

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.54  E-value=1.6e-12  Score=133.01  Aligned_cols=231  Identities=14%  Similarity=0.071  Sum_probs=142.7

Q ss_pred             EEEEecCCChHHHHHHHHHH--HCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhH--HHHHHHHHHHH
Q 017812           61 VCIVTGATSGLGAAAAYALS--REGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSV--LKFKDSLQQWL  136 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la--~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v--~~~~~~~~~~~  136 (365)
                      +|+||||||.||.+++++|+  +.|++|++++|+... ... ..+.......++.++.+|++|++..  ....+.+    
T Consensus         2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~-~~~-~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l----   75 (657)
T PRK07201          2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSL-SRL-EALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL----   75 (657)
T ss_pred             eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchH-HHH-HHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh----
Confidence            69999999999999999999  589999999997532 111 2222222225788999999985421  1111211    


Q ss_pred             hccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017812          137 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  216 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~  216 (365)
                            ..+|++||+||......     ..+...++|+.|+..+++++...    + ..++|++||.+.+.......+++
T Consensus        76 ------~~~D~Vih~Aa~~~~~~-----~~~~~~~~nv~gt~~ll~~a~~~----~-~~~~v~~SS~~v~g~~~~~~~e~  139 (657)
T PRK07201         76 ------GDIDHVVHLAAIYDLTA-----DEEAQRAANVDGTRNVVELAERL----Q-AATFHHVSSIAVAGDYEGVFRED  139 (657)
T ss_pred             ------cCCCEEEECceeecCCC-----CHHHHHHHHhHHHHHHHHHHHhc----C-CCeEEEEeccccccCccCccccc
Confidence                  35999999999753221     23557789999999988877432    2 46999999987764322222111


Q ss_pred             cccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccc----cchhHHH---HHHHH
Q 017812          217 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMR----EVPSFLS---LMAFT  289 (365)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~----~~~~~~~---~~~~~  289 (365)
                      ...       .+......|+.||.+.+.+.+.         ..|+.++.++|+.|-.+-..    ..+....   .....
T Consensus       140 ~~~-------~~~~~~~~Y~~sK~~~E~~~~~---------~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~  203 (657)
T PRK07201        140 DFD-------EGQGLPTPYHRTKFEAEKLVRE---------ECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKL  203 (657)
T ss_pred             cch-------hhcCCCCchHHHHHHHHHHHHH---------cCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHh
Confidence            110       1223345799999999887642         24789999999999654211    1111000   00000


Q ss_pred             HH----HHh-------cCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017812          290 VL----KLL-------GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  330 (365)
Q Consensus       290 ~~----~~~-------~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~  330 (365)
                      ..    .+.       ..+...+++|+++..++. .+...|+.|...+++++
T Consensus       204 ~~~~~~~~~~~~~~~~~~~v~vddva~ai~~~~~-~~~~~g~~~ni~~~~~~  254 (657)
T PRK07201        204 AKLPSWLPMVGPDGGRTNIVPVDYVADALDHLMH-KDGRDGQTFHLTDPKPQ  254 (657)
T ss_pred             ccCCcccccccCCCCeeeeeeHHHHHHHHHHHhc-CcCCCCCEEEeCCCCCC
Confidence            00    000       013468899999986543 34456777776666665

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.51  E-value=8e-13  Score=122.29  Aligned_cols=216  Identities=13%  Similarity=0.057  Sum_probs=135.7

Q ss_pred             EEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhccCCC
Q 017812           63 IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMH  142 (365)
Q Consensus        63 lITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~~~~  142 (365)
                      +||||+|.||.++++.|.+.|++|+++.+.                      ..+|++|.++++++++.           
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~----------------------~~~Dl~~~~~l~~~~~~-----------   47 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH----------------------KELDLTRQADVEAFFAK-----------   47 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc----------------------ccCCCCCHHHHHHHHhc-----------
Confidence            699999999999999999999988766432                      14899998888776553           


Q ss_pred             CCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc-cCCCcccccc
Q 017812          143 SSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA-QVNNETITGK  221 (365)
Q Consensus       143 ~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~-~~~~~~~~~~  221 (365)
                      .++|++||+|+........ .+..+..+++|+.++..+++++...    + ..++|++||...+..... +.+.+..   
T Consensus        48 ~~~d~Vih~A~~~~~~~~~-~~~~~~~~~~n~~~~~~ll~~~~~~----~-~~~~i~~SS~~vyg~~~~~~~~E~~~---  118 (306)
T PLN02725         48 EKPTYVILAAAKVGGIHAN-MTYPADFIRENLQIQTNVIDAAYRH----G-VKKLLFLGSSCIYPKFAPQPIPETAL---  118 (306)
T ss_pred             cCCCEEEEeeeeecccchh-hhCcHHHHHHHhHHHHHHHHHHHHc----C-CCeEEEeCceeecCCCCCCCCCHHHh---
Confidence            3489999999975321111 1223467889999999999988543    2 369999999765532111 1111110   


Q ss_pred             ccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcccc-------chhHHHHHHH--HHH-
Q 017812          222 FFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE-------VPSFLSLMAF--TVL-  291 (365)
Q Consensus       222 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~-------~~~~~~~~~~--~~~-  291 (365)
                        ......|....|+.||.+.+.+++.+.++      .+++++.+.|+.+-.+-...       .+........  ... 
T Consensus       119 --~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~------~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~  190 (306)
T PLN02725        119 --LTGPPEPTNEWYAIAKIAGIKMCQAYRIQ------YGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGA  190 (306)
T ss_pred             --ccCCCCCCcchHHHHHHHHHHHHHHHHHH------hCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCC
Confidence              00011122345999999999888877654      47889999999987764211       1111111000  000 


Q ss_pred             ---------HHhcCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017812          292 ---------KLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  330 (365)
Q Consensus       292 ---------~~~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~  330 (365)
                               .....+..++|++++++.++.. ....+.| ...+|+++
T Consensus       191 ~~~~~~~~g~~~~~~i~v~Dv~~~~~~~~~~-~~~~~~~-ni~~~~~~  236 (306)
T PLN02725        191 PEVVVWGSGSPLREFLHVDDLADAVVFLMRR-YSGAEHV-NVGSGDEV  236 (306)
T ss_pred             CeEEEcCCCCeeeccccHHHHHHHHHHHHhc-cccCcce-EeCCCCcc
Confidence                     0012457889999999965543 2233444 55555555

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.51  E-value=4.8e-13  Score=124.63  Aligned_cols=201  Identities=12%  Similarity=0.036  Sum_probs=130.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhccC
Q 017812           61 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  140 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~~  140 (365)
                      +|+||||||.||++++++|.++|++|++++|+.++...    +.    ...+.++.+|++|++++.+.++          
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~----l~----~~~v~~v~~Dl~d~~~l~~al~----------   63 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASF----LK----EWGAELVYGDLSLPETLPPSFK----------   63 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhh----Hh----hcCCEEEECCCCCHHHHHHHHC----------
Confidence            59999999999999999999999999999998754322    11    1257889999999988765542          


Q ss_pred             CCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCccccc
Q 017812          141 MHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITG  220 (365)
Q Consensus       141 ~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~~~~  220 (365)
                         ++|++||.++...       .+.....++|+.++..+.+++...    + -.|+|++||....              
T Consensus        64 ---g~d~Vi~~~~~~~-------~~~~~~~~~~~~~~~~l~~aa~~~----g-vkr~I~~Ss~~~~--------------  114 (317)
T CHL00194         64 ---GVTAIIDASTSRP-------SDLYNAKQIDWDGKLALIEAAKAA----K-IKRFIFFSILNAE--------------  114 (317)
T ss_pred             ---CCCEEEECCCCCC-------CCccchhhhhHHHHHHHHHHHHHc----C-CCEEEEecccccc--------------
Confidence               4899999876421       122346778999988888877542    2 3599999986432              


Q ss_pred             cccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHH------HHh
Q 017812          221 KFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVL------KLL  294 (365)
Q Consensus       221 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~------~~~  294 (365)
                            .  .+...|..+|...+.+.+          ..++..+.++|+.+..++.....  .........      .+.
T Consensus       115 ------~--~~~~~~~~~K~~~e~~l~----------~~~l~~tilRp~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~  174 (317)
T CHL00194        115 ------Q--YPYIPLMKLKSDIEQKLK----------KSGIPYTIFRLAGFFQGLISQYA--IPILEKQPIWITNESTPI  174 (317)
T ss_pred             ------c--cCCChHHHHHHHHHHHHH----------HcCCCeEEEeecHHhhhhhhhhh--hhhccCCceEecCCCCcc
Confidence                  0  112357888887765432          35788888999865332211100  000000000      000


Q ss_pred             cCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017812          295 GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  330 (365)
Q Consensus       295 ~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~  330 (365)
                       .+...+|+|++++.++.. +...|+.|...++++.
T Consensus       175 -~~i~v~Dva~~~~~~l~~-~~~~~~~~ni~g~~~~  208 (317)
T CHL00194        175 -SYIDTQDAAKFCLKSLSL-PETKNKTFPLVGPKSW  208 (317)
T ss_pred             -CccCHHHHHHHHHHHhcC-ccccCcEEEecCCCcc
Confidence             224679999999865543 4445677776666655

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.50  E-value=3.1e-13  Score=121.46  Aligned_cols=182  Identities=18%  Similarity=0.163  Sum_probs=103.4

Q ss_pred             EecCCChHHHHHHHHHHHCCC--EEEEEecCchh---HHHHHHHHHhhc--------CCCceEEEEecCCChh-hH-HHH
Q 017812           64 VTGATSGLGAAAAYALSREGF--HVVLVGRSSHL---LSETMADITSRN--------KDARLEAFQVDLSSFQ-SV-LKF  128 (365)
Q Consensus        64 ITGassGIG~~~a~~la~~G~--~Vil~~r~~~~---~~~~~~~l~~~~--------~~~~~~~~~~Dls~~~-~v-~~~  128 (365)
                      ||||||.||.++.++|++++.  +|++..|..+.   .+.+.+.+.+..        ...+++++..|++++. .+ ...
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999986  99999997643   222322222111        1468999999999865 11 112


Q ss_pred             HHHHHHHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccc
Q 017812          129 KDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNV  208 (365)
Q Consensus       129 ~~~~~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~  208 (365)
                      .+++.+         .+|++||+|+......     .+++..++|+.|+..+++.+..    .+ ..+++++|| +....
T Consensus        81 ~~~L~~---------~v~~IiH~Aa~v~~~~-----~~~~~~~~NV~gt~~ll~la~~----~~-~~~~~~iST-a~v~~  140 (249)
T PF07993_consen   81 YQELAE---------EVDVIIHCAASVNFNA-----PYSELRAVNVDGTRNLLRLAAQ----GK-RKRFHYIST-AYVAG  140 (249)
T ss_dssp             HHHHHH---------H--EEEE--SS-SBS------S--EEHHHHHHHHHHHHHHHTS----SS----EEEEEE-GGGTT
T ss_pred             hhcccc---------ccceeeecchhhhhcc-----cchhhhhhHHHHHHHHHHHHHh----cc-CcceEEecc-ccccC
Confidence            222322         3999999999764432     3456889999999999998862    22 349999999 32222


Q ss_pred             c-cccCCCcc--ccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccC
Q 017812          209 F-NAQVNNET--ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKT  273 (365)
Q Consensus       209 ~-~~~~~~~~--~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T  273 (365)
                      . ........  ......  ..+......|..||+..+.+.+..+.+      .|+.+..++||.|-.
T Consensus       141 ~~~~~~~~~~~~~~~~~~--~~~~~~~~gY~~SK~~aE~~l~~a~~~------~g~p~~I~Rp~~i~g  200 (249)
T PF07993_consen  141 SRPGTIEEKVYPEEEDDL--DPPQGFPNGYEQSKWVAERLLREAAQR------HGLPVTIYRPGIIVG  200 (249)
T ss_dssp             S-TTT--SSS-HHH--EE--E--TTSEE-HHHHHHHHHHHHHHHHHH------H---EEEEEE-EEE-
T ss_pred             CCCCcccccccccccccc--hhhccCCccHHHHHHHHHHHHHHHHhc------CCceEEEEecCcccc
Confidence            2 21111110  001111  123344558999999999999888865      368899999999966

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.48  E-value=8.6e-13  Score=117.81  Aligned_cols=168  Identities=15%  Similarity=0.141  Sum_probs=124.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcC-CCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNK-DARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      +++||||||.|.||.+++.+|.++|+.|++++.=.....+..+.+++..+ +..+.+++.|++|.+.+++++++.     
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~-----   76 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEV-----   76 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhc-----
Confidence            57899999999999999999999999999998744333333333333322 468999999999999999988753     


Q ss_pred             ccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcc
Q 017812          138 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNET  217 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~  217 (365)
                            ++|.|+|-|+...-.+.  .+..-.....|+.|+..++..+..+-     -..+|+.||.+-+..... +    
T Consensus        77 ------~fd~V~Hfa~~~~vgeS--~~~p~~Y~~nNi~gtlnlLe~~~~~~-----~~~~V~sssatvYG~p~~-i----  138 (343)
T KOG1371|consen   77 ------KFDAVMHFAALAAVGES--MENPLSYYHNNIAGTLNLLEVMKAHN-----VKALVFSSSATVYGLPTK-V----  138 (343)
T ss_pred             ------CCceEEeehhhhccchh--hhCchhheehhhhhHHHHHHHHHHcC-----CceEEEecceeeecCcce-e----
Confidence                  49999999997543222  23336778899999999988775553     358999999887633221 1    


Q ss_pred             ccccccccCCCCC-hhhhhhhhHHHHHHHHHHHHHHh
Q 017812          218 ITGKFFLRSKCYP-CARIYEYSKLCLLIFSYELHRNL  253 (365)
Q Consensus       218 ~~~~~~~~~~~~~-~~~~Y~~sK~a~~~~~~~la~e~  253 (365)
                          .+.+..+.. +.+.|+.+|.+++...+.....+
T Consensus       139 ----p~te~~~t~~p~~pyg~tK~~iE~i~~d~~~~~  171 (343)
T KOG1371|consen  139 ----PITEEDPTDQPTNPYGKTKKAIEEIIHDYNKAY  171 (343)
T ss_pred             ----eccCcCCCCCCCCcchhhhHHHHHHHHhhhccc
Confidence                122223333 77889999999999998887654

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=99.44  E-value=7.5e-12  Score=112.76  Aligned_cols=188  Identities=18%  Similarity=0.221  Sum_probs=149.8

Q ss_pred             CCEEEEecC-CChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           59 RPVCIVTGA-TSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        59 ~k~vlITGa-ssGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .++|||.|. +.-|++.+|..|-++|+-|++++.+.++.+.+.++-     ...+.....|..++.++...+.++.+.+.
T Consensus         3 ~evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed~~~ve~e~-----~~dI~~L~ld~~~~~~~~~~l~~f~~~L~   77 (299)
T PF08643_consen    3 KEVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAEDEKYVESED-----RPDIRPLWLDDSDPSSIHASLSRFASLLS   77 (299)
T ss_pred             eeEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHHHHHHHhcc-----CCCCCCcccCCCCCcchHHHHHHHHHHhc
Confidence            468999996 899999999999999999999999987655544442     34688899999999999888888888764


Q ss_pred             cc--------CCCCCeeEEEecCCcc---cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCC-CCCeEEE-EcCCc
Q 017812          138 DS--------DMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP-VPSRIVN-VTSFT  204 (365)
Q Consensus       138 ~~--------~~~~~id~lv~nAG~~---~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~-~~g~iV~-vsS~~  204 (365)
                      ..        .+.-.+..+|.-....   +|.+.++.+.|.+.++.|++.++.+++.++|+++.+. .+.+||. .-|..
T Consensus        78 ~p~~p~~~~~~h~l~L~svi~~Psl~yp~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~~~~iil~~Psi~  157 (299)
T PF08643_consen   78 RPHVPFPGAPPHHLQLKSVIFIPSLSYPTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQKSKIILFNPSIS  157 (299)
T ss_pred             CCCCCCCCCCCceeEEEEEEEecCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEeCchh
Confidence            31        0112466666555543   4556889999999999999999999999999999822 1355554 44665


Q ss_pred             ccccccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCC
Q 017812          205 HRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTN  274 (365)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~  274 (365)
                      ..                    ...|..+.-.....++.+|++.|++|+.   ..+|.|..++.|.++-.
T Consensus       158 ss--------------------l~~PfhspE~~~~~al~~~~~~LrrEl~---~~~I~V~~i~LG~l~i~  204 (299)
T PF08643_consen  158 SS--------------------LNPPFHSPESIVSSALSSFFTSLRRELR---PHNIDVTQIKLGNLDIG  204 (299)
T ss_pred             hc--------------------cCCCccCHHHHHHHHHHHHHHHHHHHhh---hcCCceEEEEeeeeccc
Confidence            55                    6677888889999999999999999998   89999999999988755

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.44  E-value=1.1e-11  Score=110.80  Aligned_cols=204  Identities=18%  Similarity=0.145  Sum_probs=138.3

Q ss_pred             EEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhccCC
Q 017812           62 CIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDM  141 (365)
Q Consensus        62 vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~~~  141 (365)
                      +||||++|-+|.++++.|. .+..|+.++|..                       +|++|.+.+.+++++.         
T Consensus         3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~-----------------------~Ditd~~~v~~~i~~~---------   49 (281)
T COG1091           3 ILITGANGQLGTELRRALP-GEFEVIATDRAE-----------------------LDITDPDAVLEVIRET---------   49 (281)
T ss_pred             EEEEcCCChHHHHHHHHhC-CCceEEeccCcc-----------------------ccccChHHHHHHHHhh---------
Confidence            9999999999999999999 778999988853                       8999999999988763         


Q ss_pred             CCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcccccc
Q 017812          142 HSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGK  221 (365)
Q Consensus       142 ~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~~~~~  221 (365)
                        ++|++||+|+...-  +.-+.+-+..+.+|..|+.++.+++...      +.++|++|+-.-+.+..+.         
T Consensus        50 --~PDvVIn~AAyt~v--D~aE~~~e~A~~vNa~~~~~lA~aa~~~------ga~lVhiSTDyVFDG~~~~---------  110 (281)
T COG1091          50 --RPDVVINAAAYTAV--DKAESEPELAFAVNATGAENLARAAAEV------GARLVHISTDYVFDGEKGG---------  110 (281)
T ss_pred             --CCCEEEECcccccc--ccccCCHHHHHHhHHHHHHHHHHHHHHh------CCeEEEeecceEecCCCCC---------
Confidence              59999999998532  2223446789999999999999998544      4799999997765333211         


Q ss_pred             ccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHH------HHHhc
Q 017812          222 FFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTV------LKLLG  295 (365)
Q Consensus       222 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~------~~~~~  295 (365)
                      .+.+.....+...|+.||.+-+..+++..          -+...++..|+-..-.+++...........      ....+
T Consensus       111 ~Y~E~D~~~P~nvYG~sKl~GE~~v~~~~----------~~~~I~Rtswv~g~~g~nFv~tml~la~~~~~l~vv~Dq~g  180 (281)
T COG1091         111 PYKETDTPNPLNVYGRSKLAGEEAVRAAG----------PRHLILRTSWVYGEYGNNFVKTMLRLAKEGKELKVVDDQYG  180 (281)
T ss_pred             CCCCCCCCCChhhhhHHHHHHHHHHHHhC----------CCEEEEEeeeeecCCCCCHHHHHHHHhhcCCceEEECCeee
Confidence            11222455677899999999988876553          234456666665554433322111110000      00112


Q ss_pred             CCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCc
Q 017812          296 LLQSPEKGINSVLDAALAPPETSGVYFFGGKGR  328 (365)
Q Consensus       296 ~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~  328 (365)
                      .....+++|+++..++.. ....|.|-....|+
T Consensus       181 sPt~~~dlA~~i~~ll~~-~~~~~~yH~~~~g~  212 (281)
T COG1091         181 SPTYTEDLADAILELLEK-EKEGGVYHLVNSGE  212 (281)
T ss_pred             CCccHHHHHHHHHHHHhc-cccCcEEEEeCCCc
Confidence            456889999999964433 33334554544444

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.43  E-value=1.4e-12  Score=119.43  Aligned_cols=206  Identities=16%  Similarity=0.088  Sum_probs=125.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhccC
Q 017812           61 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  140 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~~  140 (365)
                      ++|||||+|-||.++++.|.++|++|+.++|+                       .+|++|.+++.+++++.        
T Consensus         2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~r~-----------------------~~dl~d~~~~~~~~~~~--------   50 (286)
T PF04321_consen    2 RILITGASGFLGSALARALKERGYEVIATSRS-----------------------DLDLTDPEAVAKLLEAF--------   50 (286)
T ss_dssp             EEEEETTTSHHHHHHHHHHTTTSEEEEEESTT-----------------------CS-TTSHHHHHHHHHHH--------
T ss_pred             EEEEECCCCHHHHHHHHHHhhCCCEEEEeCch-----------------------hcCCCCHHHHHHHHHHh--------
Confidence            59999999999999999999999999999876                       68999999988888764        


Q ss_pred             CCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCccccc
Q 017812          141 MHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITG  220 (365)
Q Consensus       141 ~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~~~~  220 (365)
                         ++|++||+||+..+  +.-+.+-+..+.+|+.++..+.+.+...      +.++|++||...+.+....        
T Consensus        51 ---~pd~Vin~aa~~~~--~~ce~~p~~a~~iN~~~~~~la~~~~~~------~~~li~~STd~VFdG~~~~--------  111 (286)
T PF04321_consen   51 ---KPDVVINCAAYTNV--DACEKNPEEAYAINVDATKNLAEACKER------GARLIHISTDYVFDGDKGG--------  111 (286)
T ss_dssp             -----SEEEE------H--HHHHHSHHHHHHHHTHHHHHHHHHHHHC------T-EEEEEEEGGGS-SSTSS--------
T ss_pred             ---CCCeEeccceeecH--HhhhhChhhhHHHhhHHHHHHHHHHHHc------CCcEEEeeccEEEcCCccc--------
Confidence               38999999998422  1123345678999999999999988543      4799999998766332111        


Q ss_pred             cccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHH--H-----
Q 017812          221 KFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLK--L-----  293 (365)
Q Consensus       221 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~--~-----  293 (365)
                       .+.+..+..+.+.|+.+|+..+...+...        +  ....++++++-.+-.+++   ..+.......  +     
T Consensus       112 -~y~E~d~~~P~~~YG~~K~~~E~~v~~~~--------~--~~~IlR~~~~~g~~~~~~---~~~~~~~~~~~~~i~~~~  177 (286)
T PF04321_consen  112 -PYTEDDPPNPLNVYGRSKLEGEQAVRAAC--------P--NALILRTSWVYGPSGRNF---LRWLLRRLRQGEPIKLFD  177 (286)
T ss_dssp             -SB-TTS----SSHHHHHHHHHHHHHHHH---------S--SEEEEEE-SEESSSSSSH---HHHHHHHHHCTSEEEEES
T ss_pred             -ccccCCCCCCCCHHHHHHHHHHHHHHHhc--------C--CEEEEecceecccCCCch---hhhHHHHHhcCCeeEeeC
Confidence             11222445667899999999988776632        2  577788888876622222   1111111110  0     


Q ss_pred             --hcCCCCHHHHHHHHHHHhcCCCC--CcccEEeCCCCccc
Q 017812          294 --LGLLQSPEKGINSVLDAALAPPE--TSGVYFFGGKGRTV  330 (365)
Q Consensus       294 --~~~~~~p~e~A~~i~~~~l~~~~--~~G~~~~~~~g~~~  330 (365)
                        .+.+...+++|+.++.++.....  ..+..|...+.+.+
T Consensus       178 d~~~~p~~~~dlA~~i~~l~~~~~~~~~~~Giyh~~~~~~~  218 (286)
T PF04321_consen  178 DQYRSPTYVDDLARVILELIEKNLSGASPWGIYHLSGPERV  218 (286)
T ss_dssp             SCEE--EEHHHHHHHHHHHHHHHHH-GGG-EEEE---BS-E
T ss_pred             CceeCCEEHHHHHHHHHHHHHhcccccccceeEEEecCccc
Confidence              01235789999999976544321  22334444444555

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.43  E-value=1.1e-11  Score=113.79  Aligned_cols=221  Identities=14%  Similarity=0.059  Sum_probs=120.9

Q ss_pred             EEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhccCC
Q 017812           62 CIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDM  141 (365)
Q Consensus        62 vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~~~  141 (365)
                      ||||||+|.||.+++++|+++|++|++++|+.+......          ...  ..|... ...       .+      .
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----------~~~--~~~~~~-~~~-------~~------~   54 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTK----------WEG--YKPWAP-LAE-------SE------A   54 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccc----------cee--eecccc-cch-------hh------h
Confidence            689999999999999999999999999999876532210          001  112221 111       11      2


Q ss_pred             CCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCC-CCeEEEEcCCcccccccccCCCccccc
Q 017812          142 HSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPV-PSRIVNVTSFTHRNVFNAQVNNETITG  220 (365)
Q Consensus       142 ~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~-~g~iV~vsS~~~~~~~~~~~~~~~~~~  220 (365)
                      ...+|++||+||........+.+..+..+++|+.++..+++++...    +. ..++|+.||...+......        
T Consensus        55 ~~~~D~Vvh~a~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~~~i~~S~~~~yg~~~~~--------  122 (292)
T TIGR01777        55 LEGADAVINLAGEPIADKRWTEERKQEIRDSRIDTTRALVEAIAAA----EQKPKVFISASAVGYYGTSEDR--------  122 (292)
T ss_pred             cCCCCEEEECCCCCcccccCCHHHHHHHHhcccHHHHHHHHHHHhc----CCCceEEEEeeeEEEeCCCCCC--------
Confidence            3469999999997543233345566778899999998888887543    21 1234444443333211100        


Q ss_pred             cccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHh------
Q 017812          221 KFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLL------  294 (365)
Q Consensus       221 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~------  294 (365)
                       .+.+..+..+...|+..+...+...+    .+.   ..++.++.++|+.+-.+-....+............+.      
T Consensus       123 -~~~E~~~~~~~~~~~~~~~~~e~~~~----~~~---~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~g~~~~~  194 (292)
T TIGR01777       123 -VFTEEDSPAGDDFLAELCRDWEEAAQ----AAE---DLGTRVVLLRTGIVLGPKGGALAKMLPPFRLGLGGPLGSGRQW  194 (292)
T ss_pred             -CcCcccCCCCCChHHHHHHHHHHHhh----hch---hcCCceEEEeeeeEECCCcchhHHHHHHHhcCcccccCCCCcc
Confidence             01111111222234434433333222    222   4579999999999977632111111100000000011      


Q ss_pred             cCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017812          295 GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  330 (365)
Q Consensus       295 ~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~  330 (365)
                      .-+...+|+|+.++.++..+ ...|.|.. .+++++
T Consensus       195 ~~~i~v~Dva~~i~~~l~~~-~~~g~~~~-~~~~~~  228 (292)
T TIGR01777       195 FSWIHIEDLVQLILFALENA-SISGPVNA-TAPEPV  228 (292)
T ss_pred             cccEeHHHHHHHHHHHhcCc-ccCCceEe-cCCCcc
Confidence            13468999999999766443 33465544 444444

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.42  E-value=3.8e-12  Score=108.72  Aligned_cols=181  Identities=21%  Similarity=0.105  Sum_probs=123.3

Q ss_pred             EEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhccCC
Q 017812           62 CIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDM  141 (365)
Q Consensus        62 vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~~~  141 (365)
                      |+|+||||.+|+.++++|.++|++|++++|++++.++          ..+++.+++|+.|++++.+.+.           
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~----------~~~~~~~~~d~~d~~~~~~al~-----------   59 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED----------SPGVEIIQGDLFDPDSVKAALK-----------   59 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH----------CTTEEEEESCTTCHHHHHHHHT-----------
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc----------ccccccceeeehhhhhhhhhhh-----------
Confidence            7899999999999999999999999999999987665          3578999999999987776543           


Q ss_pred             CCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcccccc
Q 017812          142 HSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGK  221 (365)
Q Consensus       142 ~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~~~~~  221 (365)
                        +.|++|+++|....      +             ...++.++..+++.+ ..++|++||............       
T Consensus        60 --~~d~vi~~~~~~~~------~-------------~~~~~~~~~a~~~~~-~~~~v~~s~~~~~~~~~~~~~-------  110 (183)
T PF13460_consen   60 --GADAVIHAAGPPPK------D-------------VDAAKNIIEAAKKAG-VKRVVYLSSAGVYRDPPGLFS-------  110 (183)
T ss_dssp             --TSSEEEECCHSTTT------H-------------HHHHHHHHHHHHHTT-SSEEEEEEETTGTTTCTSEEE-------
T ss_pred             --hcchhhhhhhhhcc------c-------------ccccccccccccccc-cccceeeeccccCCCCCcccc-------
Confidence              58999999976322      0             445556666666655 579999999886621111000       


Q ss_pred             ccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhcCCCCHH
Q 017812          222 FFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPE  301 (365)
Q Consensus       222 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~  301 (365)
                          ....+....|...|...+.+.    +      ..++..+.++||++..+..........     .........+.+
T Consensus       111 ----~~~~~~~~~~~~~~~~~e~~~----~------~~~~~~~ivrp~~~~~~~~~~~~~~~~-----~~~~~~~~i~~~  171 (183)
T PF13460_consen  111 ----DEDKPIFPEYARDKREAEEAL----R------ESGLNWTIVRPGWIYGNPSRSYRLIKE-----GGPQGVNFISRE  171 (183)
T ss_dssp             ----GGTCGGGHHHHHHHHHHHHHH----H------HSTSEEEEEEESEEEBTTSSSEEEESS-----TSTTSHCEEEHH
T ss_pred             ----cccccchhhhHHHHHHHHHHH----H------hcCCCEEEEECcEeEeCCCcceeEEec-----cCCCCcCcCCHH
Confidence                011222356777776554333    1      348999999999987665331110000     000011346899


Q ss_pred             HHHHHHHHHh
Q 017812          302 KGINSVLDAA  311 (365)
Q Consensus       302 e~A~~i~~~~  311 (365)
                      |+|..+++++
T Consensus       172 DvA~~~~~~l  181 (183)
T PF13460_consen  172 DVAKAIVEAL  181 (183)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHh
Confidence            9999999765

...

>PLN02778 3,5-epimerase/4-reductase

Probab=99.39  E-value=3.4e-11  Score=111.10  Aligned_cols=146  Identities=13%  Similarity=0.051  Sum_probs=92.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhc
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  138 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~  138 (365)
                      .+.+|||||+|.||.+++++|.++|++|+...                          .|+++.+.+...++   +    
T Consensus         9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~--------------------------~~~~~~~~v~~~l~---~----   55 (298)
T PLN02778          9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS--------------------------GRLENRASLEADID---A----   55 (298)
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCCEEEEec--------------------------CccCCHHHHHHHHH---h----
Confidence            46799999999999999999999999987432                          23344444433332   1    


Q ss_pred             cCCCCCeeEEEecCCcccCCC-CCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcc
Q 017812          139 SDMHSSIQLLINNAGILATSS-RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNET  217 (365)
Q Consensus       139 ~~~~~~id~lv~nAG~~~~~~-~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~  217 (365)
                          .++|++||.||...... +...+.-...+++|+.++..+++++...    +  .+.+++||...+.........+ 
T Consensus        56 ----~~~D~ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~----g--v~~v~~sS~~vy~~~~~~p~~~-  124 (298)
T PLN02778         56 ----VKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRER----G--LVLTNYATGCIFEYDDAHPLGS-  124 (298)
T ss_pred             ----cCCCEEEECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHh----C--CCEEEEecceEeCCCCCCCccc-
Confidence                35899999999864321 1123445678999999999999998543    2  2455566544331111000000 


Q ss_pred             cccccccc-CCCCChhhhhhhhHHHHHHHHHHHH
Q 017812          218 ITGKFFLR-SKCYPCARIYEYSKLCLLIFSYELH  250 (365)
Q Consensus       218 ~~~~~~~~-~~~~~~~~~Y~~sK~a~~~~~~~la  250 (365)
                        +..+.+ ..+.++.+.|+.||.+.+.+++..+
T Consensus       125 --~~~~~Ee~~p~~~~s~Yg~sK~~~E~~~~~y~  156 (298)
T PLN02778        125 --GIGFKEEDTPNFTGSFYSKTKAMVEELLKNYE  156 (298)
T ss_pred             --CCCCCcCCCCCCCCCchHHHHHHHHHHHHHhh
Confidence              000111 1233445789999999999987754

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.38  E-value=3.6e-11  Score=110.07  Aligned_cols=190  Identities=19%  Similarity=0.156  Sum_probs=124.1

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCC-CEEEEEecCch---hHHHHHHHHH-----hhcCCCceEEEEecCCChh--hHHHH
Q 017812           60 PVCIVTGATSGLGAAAAYALSREG-FHVVLVGRSSH---LLSETMADIT-----SRNKDARLEAFQVDLSSFQ--SVLKF  128 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G-~~Vil~~r~~~---~~~~~~~~l~-----~~~~~~~~~~~~~Dls~~~--~v~~~  128 (365)
                      +++++|||||.+|..+.++|..+- ++|++..|-.+   ..+.+.+.+.     +.....+++++..|++.++  -=+.-
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            479999999999999999988765 59999988543   2333333333     1122568999999999432  11112


Q ss_pred             HHHHHHHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccc
Q 017812          129 KDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNV  208 (365)
Q Consensus       129 ~~~~~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~  208 (365)
                      .+++.         ..+|.+||||+..+...     ...+....|+.|+..+++.+...    + ...+.+|||++....
T Consensus        81 ~~~La---------~~vD~I~H~gA~Vn~v~-----pYs~L~~~NVlGT~evlrLa~~g----k-~Kp~~yVSsisv~~~  141 (382)
T COG3320          81 WQELA---------ENVDLIIHNAALVNHVF-----PYSELRGANVLGTAEVLRLAATG----K-PKPLHYVSSISVGET  141 (382)
T ss_pred             HHHHh---------hhcceEEecchhhcccC-----cHHHhcCcchHhHHHHHHHHhcC----C-CceeEEEeeeeeccc
Confidence            22222         35999999999764322     25677889999999998877432    1 335999999886644


Q ss_pred             ccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCc
Q 017812          209 FNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNI  275 (365)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~  275 (365)
                      ....-...+.+...-...........|+.||.+.+.+++...       ..|+.+..++||+|..+-
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~-------~rGLpv~I~Rpg~I~gds  201 (382)
T COG3320         142 EYYSNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAG-------DRGLPVTIFRPGYITGDS  201 (382)
T ss_pred             cccCCCccccccccccccccCccCCCcchhHHHHHHHHHHHh-------hcCCCeEEEecCeeeccC
Confidence            322111111110000001333445789999999988887665       458999999999995443

>PRK05865 hypothetical protein; Provisional

Probab=99.33  E-value=2.6e-11  Score=124.29  Aligned_cols=182  Identities=15%  Similarity=0.065  Sum_probs=122.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhccC
Q 017812           61 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  140 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~~  140 (365)
                      +++||||+|+||.+++++|+++|++|++++|+....      .     ...+.++.+|++|.+++.++++          
T Consensus         2 kILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~------~-----~~~v~~v~gDL~D~~~l~~al~----------   60 (854)
T PRK05865          2 RIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS------W-----PSSADFIAADIRDATAVESAMT----------   60 (854)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh------c-----ccCceEEEeeCCCHHHHHHHHh----------
Confidence            599999999999999999999999999999975321      1     1257789999999988876553          


Q ss_pred             CCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCccccc
Q 017812          141 MHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITG  220 (365)
Q Consensus       141 ~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~~~~  220 (365)
                         .+|++||+|+...+           .+++|+.++..+++++.    +.+ .++||++||..                
T Consensus        61 ---~vD~VVHlAa~~~~-----------~~~vNv~GT~nLLeAa~----~~g-vkr~V~iSS~~----------------  105 (854)
T PRK05865         61 ---GADVVAHCAWVRGR-----------NDHINIDGTANVLKAMA----ETG-TGRIVFTSSGH----------------  105 (854)
T ss_pred             ---CCCEEEECCCcccc-----------hHHHHHHHHHHHHHHHH----HcC-CCeEEEECCcH----------------
Confidence               38999999986422           46899999988776653    333 46999999831                


Q ss_pred             cccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhc-----
Q 017812          221 KFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLG-----  295 (365)
Q Consensus       221 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~-----  295 (365)
                                        |.+.+.+.+          ..++.+..+.|+.+-.+-...   ...........+.+     
T Consensus       106 ------------------K~aaE~ll~----------~~gl~~vILRp~~VYGP~~~~---~i~~ll~~~v~~~G~~~~~  154 (854)
T PRK05865        106 ------------------QPRVEQMLA----------DCGLEWVAVRCALIFGRNVDN---WVQRLFALPVLPAGYADRV  154 (854)
T ss_pred             ------------------HHHHHHHHH----------HcCCCEEEEEeceEeCCChHH---HHHHHhcCceeccCCCCce
Confidence                              666665442          247889999999987764211   11110000001111     


Q ss_pred             -CCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017812          296 -LLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  330 (365)
Q Consensus       296 -~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~  330 (365)
                       .+..++|+|++++.++......+| .|...+++..
T Consensus       155 ~dfIhVdDVA~Ai~~aL~~~~~~gg-vyNIgsg~~~  189 (854)
T PRK05865        155 VQVVHSDDAQRLLVRALLDTVIDSG-PVNLAAPGEL  189 (854)
T ss_pred             EeeeeHHHHHHHHHHHHhCCCcCCC-eEEEECCCcc
Confidence             246789999999865543333334 4554555543

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.30  E-value=1.2e-10  Score=115.78  Aligned_cols=248  Identities=13%  Similarity=0.148  Sum_probs=149.5

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCC---EEEEEecCchh---HHHHHHHH---------HhhcC-------CCceEE
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGF---HVVLVGRSSHL---LSETMADI---------TSRNK-------DARLEA  114 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~---~Vil~~r~~~~---~~~~~~~l---------~~~~~-------~~~~~~  114 (365)
                      ++||+|+||||||.||+.++.+|++.+.   +|++..|....   .+.+.+++         ++..+       ..++.+
T Consensus       117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~  196 (605)
T PLN02503        117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVP  196 (605)
T ss_pred             hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEE
Confidence            5799999999999999999999998753   78999986432   22222222         22222       247899


Q ss_pred             EEecCCChh-hH-HHHHHHHHHHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCC
Q 017812          115 FQVDLSSFQ-SV-LKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP  192 (365)
Q Consensus       115 ~~~Dls~~~-~v-~~~~~~~~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~  192 (365)
                      +..|+++++ .+ .+..+.+.         ..+|++||+|+....     .+..+..+++|+.|+..+++.+...-    
T Consensus       197 v~GDl~d~~LGLs~~~~~~L~---------~~vDiVIH~AA~v~f-----~~~~~~a~~vNV~GT~nLLelA~~~~----  258 (605)
T PLN02503        197 VVGNVCESNLGLEPDLADEIA---------KEVDVIINSAANTTF-----DERYDVAIDINTRGPCHLMSFAKKCK----  258 (605)
T ss_pred             EEeeCCCcccCCCHHHHHHHH---------hcCCEEEECcccccc-----ccCHHHHHHHHHHHHHHHHHHHHHcC----
Confidence            999999873 00 01112222         249999999997542     13467889999999999999875431    


Q ss_pred             CCCeEEEEcCCcccccccccCCCcccc-----------------------c-----------c-c--------------c
Q 017812          193 VPSRIVNVTSFTHRNVFNAQVNNETIT-----------------------G-----------K-F--------------F  223 (365)
Q Consensus       193 ~~g~iV~vsS~~~~~~~~~~~~~~~~~-----------------------~-----------~-~--------------~  223 (365)
                      ...++|++||...+....+.+.+....                       -           . .              .
T Consensus       259 ~lk~fV~vSTayVyG~~~G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~  338 (605)
T PLN02503        259 KLKLFLQVSTAYVNGQRQGRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGL  338 (605)
T ss_pred             CCCeEEEccCceeecCCCCeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhccc
Confidence            135799999977654432221111100                       0           0 0              0


Q ss_pred             ccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHH-------HHHHHHHhc-
Q 017812          224 LRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLM-------AFTVLKLLG-  295 (365)
Q Consensus       224 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~-------~~~~~~~~~-  295 (365)
                      .+..-.+....|..||+..+.+++..        ..++.+..++|+.|.+.....+|.+....       .......+. 
T Consensus       339 ~~~~~~~~pNtYt~TK~lAE~lV~~~--------~~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~g~G~lr~  410 (605)
T PLN02503        339 ERAKLYGWQDTYVFTKAMGEMVINSM--------RGDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKGQLTG  410 (605)
T ss_pred             chhhhCCCCChHHHHHHHHHHHHHHh--------cCCCCEEEEcCCEecccccCCccccccCccccchhhhheeccceeE
Confidence            00112333468999999988887632        24788999999999664443333332220       000000000 


Q ss_pred             ---------CCCCHHHHHHHHHHHhcC-CC--CCcccEEeCCCC--ccc
Q 017812          296 ---------LLQSPEKGINSVLDAALA-PP--ETSGVYFFGGKG--RTV  330 (365)
Q Consensus       296 ---------~~~~p~e~A~~i~~~~l~-~~--~~~G~~~~~~~g--~~~  330 (365)
                               -+..+|.++++++-+... ..  ...+..|....+  +|+
T Consensus       411 ~~~~~~~~~DiVPVD~vvna~i~a~a~~~~~~~~~~~vYn~ts~~~nP~  459 (605)
T PLN02503        411 FLADPNGVLDVVPADMVVNATLAAMAKHGGAAKPEINVYQIASSVVNPL  459 (605)
T ss_pred             EEeCCCeeEeEEeecHHHHHHHHHHHhhhcccCCCCCEEEeCCCCCCCe
Confidence                     135788899998854221 11  235778876655  554

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.29  E-value=1e-09  Score=121.47  Aligned_cols=245  Identities=19%  Similarity=0.096  Sum_probs=144.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCC----CEEEEEecCchhHHH---HHHHHHhhc-----CCCceEEEEecCCChhhH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREG----FHVVLVGRSSHLLSE---TMADITSRN-----KDARLEAFQVDLSSFQSV  125 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G----~~Vil~~r~~~~~~~---~~~~l~~~~-----~~~~~~~~~~Dls~~~~v  125 (365)
                      ..++|+||||+|.||.+++++|+++|    .+|++..|+......   ..+......     ...++.++..|++++.--
T Consensus       970 ~~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lg 1049 (1389)
T TIGR03443       970 TPITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFG 1049 (1389)
T ss_pred             CCceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCC
Confidence            35889999999999999999999987    799999998544322   222221110     013688999999865210


Q ss_pred             --HHHHHHHHHHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCC
Q 017812          126 --LKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSF  203 (365)
Q Consensus       126 --~~~~~~~~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~  203 (365)
                        ....+++.         ..+|++||||+.....     ..++....+|+.|+..+++.+...    + ..+++++||.
T Consensus      1050 l~~~~~~~l~---------~~~d~iiH~Aa~~~~~-----~~~~~~~~~nv~gt~~ll~~a~~~----~-~~~~v~vSS~ 1110 (1389)
T TIGR03443      1050 LSDEKWSDLT---------NEVDVIIHNGALVHWV-----YPYSKLRDANVIGTINVLNLCAEG----K-AKQFSFVSST 1110 (1389)
T ss_pred             cCHHHHHHHH---------hcCCEEEECCcEecCc-----cCHHHHHHhHHHHHHHHHHHHHhC----C-CceEEEEeCe
Confidence              11222222         3589999999976421     123445568999999999887432    2 3589999998


Q ss_pred             ccccccccc-CCC-------ccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCc
Q 017812          204 THRNVFNAQ-VNN-------ETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNI  275 (365)
Q Consensus       204 ~~~~~~~~~-~~~-------~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~  275 (365)
                      +.+...... ...       ..+................|+.||++.+.+++..+       ..|+.++.++||.|..+.
T Consensus      1111 ~v~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~-------~~g~~~~i~Rpg~v~G~~ 1183 (1389)
T TIGR03443      1111 SALDTEYYVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAG-------KRGLRGCIVRPGYVTGDS 1183 (1389)
T ss_pred             eecCcccccchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHH-------hCCCCEEEECCCccccCC
Confidence            765321100 000       00000000000122234569999999998887643       348999999999997653


Q ss_pred             cccc---hhHHHHHHHHHHHHh---------cCCCCHHHHHHHHHHHhcCCCC-CcccEEeCCCCcc
Q 017812          276 MREV---PSFLSLMAFTVLKLL---------GLLQSPEKGINSVLDAALAPPE-TSGVYFFGGKGRT  329 (365)
Q Consensus       276 ~~~~---~~~~~~~~~~~~~~~---------~~~~~p~e~A~~i~~~~l~~~~-~~G~~~~~~~g~~  329 (365)
                      ....   ........ .....+         .-+...+++|++++.++..... ..+..|...++..
T Consensus      1184 ~~g~~~~~~~~~~~~-~~~~~~~~~p~~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~~ 1249 (1389)
T TIGR03443      1184 KTGATNTDDFLLRML-KGCIQLGLIPNINNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGHPR 1249 (1389)
T ss_pred             CcCCCCchhHHHHHH-HHHHHhCCcCCCCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCCC
Confidence            3221   11111111 111111         1245789999999977654432 2344555444433

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=99.25  E-value=5.5e-10  Score=97.89  Aligned_cols=252  Identities=13%  Similarity=0.064  Sum_probs=161.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCC--CEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREG--FHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G--~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      .+.++||||.|.||...+..++..-  ++.+.++.=.=-..  .+.+++.-..++..+++.|+.+...+..++.      
T Consensus         6 ~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~--~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~------   77 (331)
T KOG0747|consen    6 EKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSN--LKNLEPVRNSPNYKFVEGDIADADLVLYLFE------   77 (331)
T ss_pred             cceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccc--cchhhhhccCCCceEeeccccchHHHHhhhc------
Confidence            3889999999999999999999873  56655543110000  1222222235688999999999888777654      


Q ss_pred             hccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017812          137 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  216 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~  216 (365)
                           ..++|.|+|-|.......  +.-+--...+.|++++..|++++.-...    -.++|.||+-..++.........
T Consensus        78 -----~~~id~vihfaa~t~vd~--s~~~~~~~~~nnil~t~~Lle~~~~sg~----i~~fvhvSTdeVYGds~~~~~~~  146 (331)
T KOG0747|consen   78 -----TEEIDTVIHFAAQTHVDR--SFGDSFEFTKNNILSTHVLLEAVRVSGN----IRRFVHVSTDEVYGDSDEDAVVG  146 (331)
T ss_pred             -----cCchhhhhhhHhhhhhhh--hcCchHHHhcCCchhhhhHHHHHHhccC----eeEEEEecccceecCcccccccc
Confidence                 358999999998753211  1111123568899999999998866542    35899999987764332211111


Q ss_pred             cccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc---hhHHHHHHHHHHHH
Q 017812          217 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV---PSFLSLMAFTVLKL  293 (365)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~---~~~~~~~~~~~~~~  293 (365)
                              +.....+-..|++||+|.+++.+++.+.      .|+.+..++-+.|-.|-.-..   |.+..........+
T Consensus       147 --------E~s~~nPtnpyAasKaAaE~~v~Sy~~s------y~lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~~~~  212 (331)
T KOG0747|consen  147 --------EASLLNPTNPYAASKAAAEMLVRSYGRS------YGLPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGKEYP  212 (331)
T ss_pred             --------ccccCCCCCchHHHHHHHHHHHHHHhhc------cCCcEEEEeccCccCCCcChHHHhHHHHHHHHhCCCcc
Confidence                    1244556678999999999999999985      578899999888887754332   22221111100001


Q ss_pred             -------hcCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccccCCcccCCHHHHHHHHHHHHHhhhc
Q 017812          294 -------LGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFIN  355 (365)
Q Consensus       294 -------~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~~~~~~~~d~~~~~~lw~~~~~~~~~  355 (365)
                             .+...-++|+++++-..+..  ...|+.|......          |.....|-+...++++.
T Consensus       213 i~g~g~~~rs~l~veD~~ea~~~v~~K--g~~geIYNIgtd~----------e~~~~~l~k~i~eli~~  269 (331)
T KOG0747|consen  213 IHGDGLQTRSYLYVEDVSEAFKAVLEK--GELGEIYNIGTDD----------EMRVIDLAKDICELFEK  269 (331)
T ss_pred             eecCcccceeeEeHHHHHHHHHHHHhc--CCccceeeccCcc----------hhhHHHHHHHHHHHHHH
Confidence                   11235789999998844433  5568999755433          33344566666666554

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.24  E-value=1.4e-10  Score=101.61  Aligned_cols=186  Identities=17%  Similarity=0.151  Sum_probs=133.8

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhh--cCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSR--NKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~--~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      +|++||||-+|-=|..+|+.|.++|+.|+.+.|....-....-.+.+.  ..+.+++.+.+|++|..++.+++++++   
T Consensus         2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~---   78 (345)
T COG1089           2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQ---   78 (345)
T ss_pred             CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcC---
Confidence            689999999999999999999999999999988643221110011111  114568999999999999988887653   


Q ss_pred             hccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017812          137 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  216 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~  216 (365)
                              +|-+.|-|+..  +...+.+..+.+.+++.+|+.++++++.-.-.+   ..|+..-||+--++.-       
T Consensus        79 --------PdEIYNLaAQS--~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~---~~rfYQAStSE~fG~v-------  138 (345)
T COG1089          79 --------PDEIYNLAAQS--HVGVSFEQPEYTADVDAIGTLRLLEAIRILGEK---KTRFYQASTSELYGLV-------  138 (345)
T ss_pred             --------chhheeccccc--cccccccCcceeeeechhHHHHHHHHHHHhCCc---ccEEEecccHHhhcCc-------
Confidence                    78888888753  345566677889999999999999988554321   4688887776543210       


Q ss_pred             cccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCC
Q 017812          217 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG  269 (365)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG  269 (365)
                        ......+..|+.+.++|+++|......+...+..+...--.||-+|.=+|.
T Consensus       139 --~~~pq~E~TPFyPrSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~  189 (345)
T COG1089         139 --QEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPL  189 (345)
T ss_pred             --ccCccccCCCCCCCCHHHHHHHHHHheeeehHhhcCceeecceeecCCCCC
Confidence              011112237888999999999999888888877665333467777776666

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.21  E-value=3.7e-10  Score=103.54  Aligned_cols=189  Identities=13%  Similarity=-0.013  Sum_probs=113.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhccC
Q 017812           61 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  140 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~~  140 (365)
                      +++||||||.||++++++|.++|++|.+++|++++..           ...+..+.+|+.|++++...++...       
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~-----------~~~~~~~~~d~~d~~~l~~a~~~~~-------   62 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA-----------GPNEKHVKFDWLDEDTWDNPFSSDD-------   62 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc-----------CCCCccccccCCCHHHHHHHHhccc-------
Confidence            3899999999999999999999999999999987531           1245567899999999988775432       


Q ss_pred             CCCC-eeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcccc
Q 017812          141 MHSS-IQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETIT  219 (365)
Q Consensus       141 ~~~~-id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~~~  219 (365)
                      ...+ +|.++++++...       +..            ...+.++..+++.+ -.|||++||....             
T Consensus        63 ~~~g~~d~v~~~~~~~~-------~~~------------~~~~~~i~aa~~~g-v~~~V~~Ss~~~~-------------  109 (285)
T TIGR03649        63 GMEPEISAVYLVAPPIP-------DLA------------PPMIKFIDFARSKG-VRRFVLLSASIIE-------------  109 (285)
T ss_pred             CcCCceeEEEEeCCCCC-------Chh------------HHHHHHHHHHHHcC-CCEEEEeeccccC-------------
Confidence            2344 999999887421       101            11123444455554 5699999986533             


Q ss_pred             ccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc--hhHHHHHHHH-H-HHHhc
Q 017812          220 GKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV--PSFLSLMAFT-V-LKLLG  295 (365)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~--~~~~~~~~~~-~-~~~~~  295 (365)
                             .+.+       ++...+.   .+ ++     ..|+..+.++|+++..++....  .......... . .....
T Consensus       110 -------~~~~-------~~~~~~~---~l-~~-----~~gi~~tilRp~~f~~~~~~~~~~~~~~~~~~~~~~~g~~~~  166 (285)
T TIGR03649       110 -------KGGP-------AMGQVHA---HL-DS-----LGGVEYTVLRPTWFMENFSEEFHVEAIRKENKIYSATGDGKI  166 (285)
T ss_pred             -------CCCc-------hHHHHHH---HH-Hh-----ccCCCEEEEeccHHhhhhcccccccccccCCeEEecCCCCcc
Confidence                   1111       1211111   11 11     2488999999998865542211  0000000000 0 00001


Q ss_pred             CCCCHHHHHHHHHHHhcCCCCCcccEEe
Q 017812          296 LLQSPEKGINSVLDAALAPPETSGVYFF  323 (365)
Q Consensus       296 ~~~~p~e~A~~i~~~~l~~~~~~G~~~~  323 (365)
                      -+.+++|+|+.+..++..+....+.|..
T Consensus       167 ~~v~~~Dva~~~~~~l~~~~~~~~~~~l  194 (285)
T TIGR03649       167 PFVSADDIARVAYRALTDKVAPNTDYVV  194 (285)
T ss_pred             CcccHHHHHHHHHHHhcCCCcCCCeEEe
Confidence            3569999999999766654444444443

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=99.20  E-value=2e-09  Score=86.59  Aligned_cols=215  Identities=13%  Similarity=0.037  Sum_probs=148.4

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhc
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  138 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~  138 (365)
                      ...|+|-||-+.+|.+++..|-.+++-|.-++-.+..  +          ...-..+..|-+-.++-+.+.+++-+.++ 
T Consensus         3 agrVivYGGkGALGSacv~~FkannywV~siDl~eNe--~----------Ad~sI~V~~~~swtEQe~~v~~~vg~sL~-   69 (236)
T KOG4022|consen    3 AGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENE--Q----------ADSSILVDGNKSWTEQEQSVLEQVGSSLQ-   69 (236)
T ss_pred             CceEEEEcCcchHhHHHHHHHHhcCeEEEEEeecccc--c----------ccceEEecCCcchhHHHHHHHHHHHHhhc-
Confidence            4579999999999999999999999999888776531  0          11223455555555666677777766653 


Q ss_pred             cCCCCCeeEEEecCCcccCCCCCC---HHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCC
Q 017812          139 SDMHSSIQLLINNAGILATSSRLT---PEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNN  215 (365)
Q Consensus       139 ~~~~~~id~lv~nAG~~~~~~~~~---~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~  215 (365)
                         ..++|.++|-||-+.....-+   ...-+.++.-.+.....-.+.+..+++.   +|-+-..+.-++.         
T Consensus        70 ---gekvDav~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~---GGLL~LtGAkaAl---------  134 (236)
T KOG4022|consen   70 ---GEKVDAVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKP---GGLLQLTGAKAAL---------  134 (236)
T ss_pred             ---ccccceEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCC---Cceeeeccccccc---------
Confidence               468999999999763222111   2344567777777777777777778765   3566666665665         


Q ss_pred             ccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhc
Q 017812          216 ETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLG  295 (365)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  295 (365)
                                 .+.|++..|+.+|+|+..++++|+.+-.- -++|-.+.+|-|-..+|||.|...+.....         
T Consensus       135 -----------~gTPgMIGYGMAKaAVHqLt~SLaak~SG-lP~gsaa~~ilPVTLDTPMNRKwMP~ADfs---------  193 (236)
T KOG4022|consen  135 -----------GGTPGMIGYGMAKAAVHQLTSSLAAKDSG-LPDGSAALTILPVTLDTPMNRKWMPNADFS---------  193 (236)
T ss_pred             -----------CCCCcccchhHHHHHHHHHHHHhcccccC-CCCCceeEEEeeeeccCccccccCCCCccc---------
Confidence                       78899999999999999999999876432 257888999999999999999864422111         


Q ss_pred             CCCCHHHHHHHHHHHhcCCC-CCcccEE
Q 017812          296 LLQSPEKGINSVLDAALAPP-ETSGVYF  322 (365)
Q Consensus       296 ~~~~p~e~A~~i~~~~l~~~-~~~G~~~  322 (365)
                      .+...+.+++..+.-..... .++|..+
T Consensus       194 sWTPL~fi~e~flkWtt~~~RPssGsLl  221 (236)
T KOG4022|consen  194 SWTPLSFISEHFLKWTTETSRPSSGSLL  221 (236)
T ss_pred             CcccHHHHHHHHHHHhccCCCCCCCceE
Confidence            12244566666554333322 3456554

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.19  E-value=1e-09  Score=112.42  Aligned_cols=157  Identities=13%  Similarity=0.057  Sum_probs=102.6

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhc
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  138 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~  138 (365)
                      .+++|||||+|.||++++++|.++|++|...                          ..|++|.+.+...++.       
T Consensus       380 ~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~--------------------------~~~l~d~~~v~~~i~~-------  426 (668)
T PLN02260        380 SLKFLIYGRTGWIGGLLGKLCEKQGIAYEYG--------------------------KGRLEDRSSLLADIRN-------  426 (668)
T ss_pred             CceEEEECCCchHHHHHHHHHHhCCCeEEee--------------------------ccccccHHHHHHHHHh-------
Confidence            4579999999999999999999999887311                          1357777777665543       


Q ss_pred             cCCCCCeeEEEecCCcccCC-CCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcc
Q 017812          139 SDMHSSIQLLINNAGILATS-SRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNET  217 (365)
Q Consensus       139 ~~~~~~id~lv~nAG~~~~~-~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~  217 (365)
                          .++|+|||+|+..... .+...++-+..+++|+.++..+++++...      +.++|++||...+.........  
T Consensus       427 ----~~pd~Vih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~------g~~~v~~Ss~~v~~~~~~~~~~--  494 (668)
T PLN02260        427 ----VKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCREN------GLLMMNFATGCIFEYDAKHPEG--  494 (668)
T ss_pred             ----hCCCEEEECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHc------CCeEEEEcccceecCCcccccc--
Confidence                2589999999986432 22334456788999999999999998653      2466777765433111000000  


Q ss_pred             cccccccc-CCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEec
Q 017812          218 ITGKFFLR-SKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  267 (365)
Q Consensus       218 ~~~~~~~~-~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~  267 (365)
                       ....+.+ ..+.+..+.|+.||.+.+.+++....      ...+++..+.
T Consensus       495 -~~~p~~E~~~~~~~~~~Yg~sK~~~E~~~~~~~~------~~~~r~~~~~  538 (668)
T PLN02260        495 -SGIGFKEEDKPNFTGSFYSKTKAMVEELLREYDN------VCTLRVRMPI  538 (668)
T ss_pred             -cCCCCCcCCCCCCCCChhhHHHHHHHHHHHhhhh------heEEEEEEec
Confidence             0000111 12334457899999999999877632      3456666655

>PLN00016 RNA-binding protein; Provisional

Probab=99.16  E-value=1.9e-09  Score=102.97  Aligned_cols=209  Identities=11%  Similarity=0.051  Sum_probs=122.0

Q ss_pred             CCCCEEEEe----cCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHH-------HHHHhhcCCCceEEEEecCCChhhH
Q 017812           57 IKRPVCIVT----GATSGLGAAAAYALSREGFHVVLVGRSSHLLSETM-------ADITSRNKDARLEAFQVDLSSFQSV  125 (365)
Q Consensus        57 ~~~k~vlIT----GassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~-------~~l~~~~~~~~~~~~~~Dls~~~~v  125 (365)
                      ...++|+||    ||+|.||.+++++|.++|++|++++|+.+......       .++.    ...+.++.+|+.|   +
T Consensus        50 ~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~----~~~v~~v~~D~~d---~  122 (378)
T PLN00016         50 VEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELS----SAGVKTVWGDPAD---V  122 (378)
T ss_pred             cccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhh----hcCceEEEecHHH---H
Confidence            345789999    99999999999999999999999999876432211       1121    1247888999876   2


Q ss_pred             HHHHHHHHHHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017812          126 LKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  205 (365)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~  205 (365)
                      .+++.           ...+|++||++|..                  ..++    +.++...++.+ -.++|++||...
T Consensus       123 ~~~~~-----------~~~~d~Vi~~~~~~------------------~~~~----~~ll~aa~~~g-vkr~V~~SS~~v  168 (378)
T PLN00016        123 KSKVA-----------GAGFDVVYDNNGKD------------------LDEV----EPVADWAKSPG-LKQFLFCSSAGV  168 (378)
T ss_pred             Hhhhc-----------cCCccEEEeCCCCC------------------HHHH----HHHHHHHHHcC-CCEEEEEccHhh
Confidence            22221           13589999997631                  1122    23334444443 469999999876


Q ss_pred             cccccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc-hhH-H
Q 017812          206 RNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV-PSF-L  283 (365)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~-~~~-~  283 (365)
                      +.......    ..     +..+..+   +. +|...+.+.+          ..++.++.++|+.+..+..... ... .
T Consensus       169 yg~~~~~p----~~-----E~~~~~p---~~-sK~~~E~~l~----------~~~l~~~ilRp~~vyG~~~~~~~~~~~~  225 (378)
T PLN00016        169 YKKSDEPP----HV-----EGDAVKP---KA-GHLEVEAYLQ----------KLGVNWTSFRPQYIYGPGNNKDCEEWFF  225 (378)
T ss_pred             cCCCCCCC----CC-----CCCcCCC---cc-hHHHHHHHHH----------HcCCCeEEEeceeEECCCCCCchHHHHH
Confidence            53211100    00     0011111   12 7887776532          3478899999999987753321 111 0


Q ss_pred             HHHHH-HHHH-Hh-----cCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017812          284 SLMAF-TVLK-LL-----GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  330 (365)
Q Consensus       284 ~~~~~-~~~~-~~-----~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~  330 (365)
                      ..... .... +.     .-+..++|+|++++.++.. +...|..|...+++++
T Consensus       226 ~~~~~~~~i~~~g~g~~~~~~i~v~Dva~ai~~~l~~-~~~~~~~yni~~~~~~  278 (378)
T PLN00016        226 DRLVRGRPVPIPGSGIQLTQLGHVKDLASMFALVVGN-PKAAGQIFNIVSDRAV  278 (378)
T ss_pred             HHHHcCCceeecCCCCeeeceecHHHHHHHHHHHhcC-ccccCCEEEecCCCcc
Confidence            00000 0000 00     1245789999999965543 3344677766666665

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=99.14  E-value=1.4e-10  Score=102.35  Aligned_cols=100  Identities=14%  Similarity=0.207  Sum_probs=75.6

Q ss_pred             CEEEEecC-CChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhc
Q 017812           60 PVCIVTGA-TSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  138 (365)
Q Consensus        60 k~vlITGa-ssGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~  138 (365)
                      .+=.||.. |||||+++|++|+++|++|+++++...        +..   .   ....+|+++.+++.++++.+.+    
T Consensus        15 ~VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~--------l~~---~---~~~~~Dv~d~~s~~~l~~~v~~----   76 (227)
T TIGR02114        15 SVRSITNHSTGHLGKIITETFLSAGHEVTLVTTKRA--------LKP---E---PHPNLSIREIETTKDLLITLKE----   76 (227)
T ss_pred             CceeecCCcccHHHHHHHHHHHHCCCEEEEEcChhh--------ccc---c---cCCcceeecHHHHHHHHHHHHH----
Confidence            56677776 578999999999999999999986311        110   0   0245899999999999999887    


Q ss_pred             cCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHH
Q 017812          139 SDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTK  182 (365)
Q Consensus       139 ~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~  182 (365)
                        ..+++|+||||||+..  +..+.+.++|+++   +..+.+++++
T Consensus        77 --~~g~iDiLVnnAgv~d~~~~~~~s~e~~~~~---~~~~~~~~~~  117 (227)
T TIGR02114        77 --LVQEHDILIHSMAVSDYTPVYMTDLEQVQAS---DNLNEFLSKQ  117 (227)
T ss_pred             --HcCCCCEEEECCEeccccchhhCCHHHHhhh---cchhhhhccc
Confidence              4578999999999863  4456777888866   5556666665

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.09  E-value=8.1e-10  Score=96.90  Aligned_cols=212  Identities=18%  Similarity=0.195  Sum_probs=113.3

Q ss_pred             EEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhccCC
Q 017812           62 CIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDM  141 (365)
Q Consensus        62 vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~~~  141 (365)
                      ++||||||-||++++.+|.+.|.+|+++.|++.+.++..        ...+       ...+.+    ++.        .
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~--------~~~v-------~~~~~~----~~~--------~   53 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNL--------HPNV-------TLWEGL----ADA--------L   53 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhc--------Cccc-------cccchh----hhc--------c
Confidence            589999999999999999999999999999987643311        0010       011111    111        1


Q ss_pred             CCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcccccc
Q 017812          142 HSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGK  221 (365)
Q Consensus       142 ~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~~~~~  221 (365)
                      ..++|++||-||-.-....-+.+.=+.+++    |.+..++.+.....+...+.++.+-+|..|+........       
T Consensus        54 ~~~~DavINLAG~~I~~rrWt~~~K~~i~~----SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~-------  122 (297)
T COG1090          54 TLGIDAVINLAGEPIAERRWTEKQKEEIRQ----SRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRV-------  122 (297)
T ss_pred             cCCCCEEEECCCCccccccCCHHHHHHHHH----HHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCcee-------
Confidence            236999999999742222234444444544    455555555555554433455655566666533221110       


Q ss_pred             ccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhc------
Q 017812          222 FFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLG------  295 (365)
Q Consensus       222 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~------  295 (365)
                       +.+. ..++.  --.++.+...=-.+++.     +..|+||+.++-|.|-.+-...++.......+..-.++|      
T Consensus       123 -~tE~-~~~g~--~Fla~lc~~WE~~a~~a-----~~~gtRvvllRtGvVLs~~GGaL~~m~~~fk~glGG~~GsGrQ~~  193 (297)
T COG1090         123 -VTEE-SPPGD--DFLAQLCQDWEEEALQA-----QQLGTRVVLLRTGVVLSPDGGALGKMLPLFKLGLGGKLGSGRQWF  193 (297)
T ss_pred             -eecC-CCCCC--ChHHHHHHHHHHHHhhh-----hhcCceEEEEEEEEEecCCCcchhhhcchhhhccCCccCCCCcee
Confidence             1110 00100  01223322222222222     257999999999999665433222211111111001111      


Q ss_pred             CCCCHHHHHHHHHHHhcCCCCCcccE
Q 017812          296 LLQSPEKGINSVLDAALAPPETSGVY  321 (365)
Q Consensus       296 ~~~~p~e~A~~i~~~~l~~~~~~G~~  321 (365)
                      -+...||..+.+.+++-. +.-+|.|
T Consensus       194 SWIhieD~v~~I~fll~~-~~lsGp~  218 (297)
T COG1090         194 SWIHIEDLVNAILFLLEN-EQLSGPF  218 (297)
T ss_pred             eeeeHHHHHHHHHHHHhC-cCCCCcc
Confidence            246899999999965433 3445555

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.06  E-value=1.7e-09  Score=91.48  Aligned_cols=84  Identities=18%  Similarity=0.240  Sum_probs=71.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhccC
Q 017812           61 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  140 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~~  140 (365)
                      +++||||| |+|.++++.|+++|++|++++|+.++.+++...+..   ..++.++.+|++|.+++.++++.+.+      
T Consensus         2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~---~~~i~~~~~Dv~d~~sv~~~i~~~l~------   71 (177)
T PRK08309          2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTT---PESITPLPLDYHDDDALKLAIKSTIE------   71 (177)
T ss_pred             EEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhc---CCcEEEEEccCCCHHHHHHHHHHHHH------
Confidence            69999998 788889999999999999999998877766655532   34788899999999999999998877      


Q ss_pred             CCCCeeEEEecCCc
Q 017812          141 MHSSIQLLINNAGI  154 (365)
Q Consensus       141 ~~~~id~lv~nAG~  154 (365)
                      ..+++|++|+.+-.
T Consensus        72 ~~g~id~lv~~vh~   85 (177)
T PRK08309         72 KNGPFDLAVAWIHS   85 (177)
T ss_pred             HcCCCeEEEEeccc
Confidence            56789999977654

>PRK12320 hypothetical protein; Provisional

Probab=99.02  E-value=2.1e-08  Score=101.04  Aligned_cols=185  Identities=13%  Similarity=0.081  Sum_probs=116.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhccC
Q 017812           61 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  140 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~~  140 (365)
                      +++||||+|.||.+++++|.++|++|++++|+....         .  ...+.++.+|+++.. +.+.+           
T Consensus         2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~---------~--~~~ve~v~~Dl~d~~-l~~al-----------   58 (699)
T PRK12320          2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA---------L--DPRVDYVCASLRNPV-LQELA-----------   58 (699)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc---------c--cCCceEEEccCCCHH-HHHHh-----------
Confidence            599999999999999999999999999999875321         1  235788999999873 32221           


Q ss_pred             CCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCccccc
Q 017812          141 MHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITG  220 (365)
Q Consensus       141 ~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~~~~  220 (365)
                        .++|++||.|+....          ....+|+.|+.++++++.    +.+  .++|++||..+.              
T Consensus        59 --~~~D~VIHLAa~~~~----------~~~~vNv~Gt~nLleAA~----~~G--vRiV~~SS~~G~--------------  106 (699)
T PRK12320         59 --GEADAVIHLAPVDTS----------APGGVGITGLAHVANAAA----RAG--ARLLFVSQAAGR--------------  106 (699)
T ss_pred             --cCCCEEEEcCccCcc----------chhhHHHHHHHHHHHHHH----HcC--CeEEEEECCCCC--------------
Confidence              248999999986321          112589999999988874    332  489999986432              


Q ss_pred             cccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc-hhHHHHHHHHHHHHhcCC--
Q 017812          221 KFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV-PSFLSLMAFTVLKLLGLL--  297 (365)
Q Consensus       221 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~~~~~--  297 (365)
                            .     ..|..        ++.+..      ..++.+..+.|+.+-.+-.... ......  +......+..  
T Consensus       107 ------~-----~~~~~--------aE~ll~------~~~~p~~ILR~~nVYGp~~~~~~~r~I~~--~l~~~~~~~pI~  159 (699)
T PRK12320        107 ------P-----ELYRQ--------AETLVS------TGWAPSLVIRIAPPVGRQLDWMVCRTVAT--LLRSKVSARPIR  159 (699)
T ss_pred             ------C-----ccccH--------HHHHHH------hcCCCEEEEeCceecCCCCcccHhHHHHH--HHHHHHcCCceE
Confidence                  0     01221        222222      2346788899998877632211 111111  1111111222  


Q ss_pred             -CCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017812          298 -QSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  330 (365)
Q Consensus       298 -~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~  330 (365)
                       .-.+|++++++.++..  ..+| .|...+++..
T Consensus       160 vIyVdDvv~alv~al~~--~~~G-iyNIG~~~~~  190 (699)
T PRK12320        160 VLHLDDLVRFLVLALNT--DRNG-VVDLATPDTT  190 (699)
T ss_pred             EEEHHHHHHHHHHHHhC--CCCC-EEEEeCCCee
Confidence             3789999999865432  2245 6676666655

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=98.93  E-value=1.9e-08  Score=88.34  Aligned_cols=181  Identities=14%  Similarity=0.122  Sum_probs=125.1

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      ..+++++||||.|.||.+++.+|..+|..|++++.-...-.+...-+   ....++..+..|+..+     ++.      
T Consensus        25 ~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~---~~~~~fel~~hdv~~p-----l~~------   90 (350)
T KOG1429|consen   25 SQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHW---IGHPNFELIRHDVVEP-----LLK------   90 (350)
T ss_pred             CCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchh---ccCcceeEEEeechhH-----HHH------
Confidence            46789999999999999999999999999999987544322222222   1234566777777654     332      


Q ss_pred             hccCCCCCeeEEEecCCcccCCC-CCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCC
Q 017812          137 LDSDMHSSIQLLINNAGILATSS-RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNN  215 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~~~~-~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~  215 (365)
                             .+|.++|-|...+|.. ..++   -+++.+|+.++..++..+.+.      ..|++..|+...+.-+......
T Consensus        91 -------evD~IyhLAapasp~~y~~np---vktIktN~igtln~lglakrv------~aR~l~aSTseVYgdp~~hpq~  154 (350)
T KOG1429|consen   91 -------EVDQIYHLAAPASPPHYKYNP---VKTIKTNVIGTLNMLGLAKRV------GARFLLASTSEVYGDPLVHPQV  154 (350)
T ss_pred             -------HhhhhhhhccCCCCcccccCc---cceeeecchhhHHHHHHHHHh------CceEEEeecccccCCcccCCCc
Confidence                   2777889998876543 2222   357899999999998887544      3699999988776432111111


Q ss_pred             ccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccc
Q 017812          216 ETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMR  277 (365)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~  277 (365)
                      +    ..+..-.|..+.++|...|.+.+.++.+..+      ..||.+...++-.+-.|...
T Consensus       155 e----~ywg~vnpigpr~cydegKr~aE~L~~~y~k------~~giE~rIaRifNtyGPrm~  206 (350)
T KOG1429|consen  155 E----TYWGNVNPIGPRSCYDEGKRVAETLCYAYHK------QEGIEVRIARIFNTYGPRMH  206 (350)
T ss_pred             c----ccccccCcCCchhhhhHHHHHHHHHHHHhhc------ccCcEEEEEeeecccCCccc
Confidence            1    1111225667789999999999998888776      46888888888777666543

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=98.87  E-value=2.1e-07  Score=89.59  Aligned_cols=232  Identities=17%  Similarity=0.090  Sum_probs=149.0

Q ss_pred             CCCCCCCCCEEEEecCC-ChHHHHHHHHHHHCCCEEEEEecCch-hHHHHHHHHHhhc--CCCceEEEEecCCChhhHHH
Q 017812           52 PPITGIKRPVCIVTGAT-SGLGAAAAYALSREGFHVVLVGRSSH-LLSETMADITSRN--KDARLEAFQVDLSSFQSVLK  127 (365)
Q Consensus        52 ~~~~~~~~k~vlITGas-sGIG~~~a~~la~~G~~Vil~~r~~~-~~~~~~~~l~~~~--~~~~~~~~~~Dls~~~~v~~  127 (365)
                      |....+.++++|||||+ +.||-+++.+|...|++||++..+.. +-.+..+.+-.++  ++..+.++..++++..+|+.
T Consensus       389 p~~~~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdA  468 (866)
T COG4982         389 PNGGTYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDA  468 (866)
T ss_pred             CCCCCcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHH
Confidence            34445789999999999 77999999999999999999876643 3445556665543  35678889999999999999


Q ss_pred             HHHHHHHHHhcc--------CCCCCeeEEEecCCcc--cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCC--CCC
Q 017812          128 FKDSLQQWLLDS--------DMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP--VPS  195 (365)
Q Consensus       128 ~~~~~~~~~~~~--------~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~--~~g  195 (365)
                      +++.|-+.-...        ..--.+|.++--|.+.  +...+..+ .-|-.+++-+.+..+++-.+.+.-.+++  ..-
T Consensus       469 lIewIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~ags-raE~~~rilLw~V~Rliggl~~~~s~r~v~~R~  547 (866)
T COG4982         469 LIEWIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGS-RAEFAMRILLWNVLRLIGGLKKQGSSRGVDTRL  547 (866)
T ss_pred             HHHHhccccccccCCcceecccccCcceeeecccCCccCccccCCc-hHHHHHHHHHHHHHHHHHHhhhhccccCcccce
Confidence            988775421100        0011366777666653  21122211 2345567777777777766665543332  124


Q ss_pred             eEEEEcCCcccccccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCccc-CC
Q 017812          196 RIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVK-TN  274 (365)
Q Consensus       196 ~iV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~-T~  274 (365)
                      +||.-.|..+                     .-+.+..+|+-||++++...--...|-..  ...+.+....-||+. |.
T Consensus       548 hVVLPgSPNr---------------------G~FGgDGaYgEsK~aldav~~RW~sEs~W--a~~vsl~~A~IGWtrGTG  604 (866)
T COG4982         548 HVVLPGSPNR---------------------GMFGGDGAYGESKLALDAVVNRWHSESSW--AARVSLAHALIGWTRGTG  604 (866)
T ss_pred             EEEecCCCCC---------------------CccCCCcchhhHHHHHHHHHHHhhccchh--hHHHHHhhhheeeecccc
Confidence            5666666553                     23456678999999999887666555311  234556666789996 77


Q ss_pred             ccccchhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHh
Q 017812          275 IMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAA  311 (365)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~p~e~A~~i~~~~  311 (365)
                      ++.+.............    +.-+++|.|..++.++
T Consensus       605 LMg~Ndiiv~aiEk~GV----~tyS~~EmA~~LLgL~  637 (866)
T COG4982         605 LMGHNDIIVAAIEKAGV----RTYSTDEMAFNLLGLA  637 (866)
T ss_pred             ccCCcchhHHHHHHhCc----eecCHHHHHHHHHhhc
Confidence            76554433322222221    3458999999888544

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.84  E-value=1.2e-08  Score=97.05  Aligned_cols=79  Identities=24%  Similarity=0.303  Sum_probs=61.7

Q ss_pred             CCCCCEEEEecC---------------CCh-HHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecC
Q 017812           56 GIKRPVCIVTGA---------------TSG-LGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDL  119 (365)
Q Consensus        56 ~~~~k~vlITGa---------------ssG-IG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl  119 (365)
                      +++||+++||||               |+| +|+++|++|+++|++|++++++.+ ++         .+.   ....+|+
T Consensus       185 ~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~---------~~~---~~~~~dv  251 (399)
T PRK05579        185 DLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP---------TPA---GVKRIDV  251 (399)
T ss_pred             ccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc---------CCC---CcEEEcc
Confidence            478999999999               555 999999999999999999998752 11         111   1356899


Q ss_pred             CChhhHHHHHHHHHHHHhccCCCCCeeEEEecCCccc
Q 017812          120 SSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA  156 (365)
Q Consensus       120 s~~~~v~~~~~~~~~~~~~~~~~~~id~lv~nAG~~~  156 (365)
                      ++.+++.+.++   +      ..+++|++|||||+..
T Consensus       252 ~~~~~~~~~v~---~------~~~~~DilI~~Aav~d  279 (399)
T PRK05579        252 ESAQEMLDAVL---A------ALPQADIFIMAAAVAD  279 (399)
T ss_pred             CCHHHHHHHHH---H------hcCCCCEEEEcccccc
Confidence            99888776665   3      3467999999999863

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.77  E-value=3.1e-07  Score=89.87  Aligned_cols=128  Identities=16%  Similarity=0.119  Sum_probs=88.2

Q ss_pred             CCEEE----EecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           59 RPVCI----VTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        59 ~k~vl----ITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      |..++    |+||++|+|.++++.|...|+.|+.+.+...+..        .....++..+.+|.+..+..+        
T Consensus        34 ~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~--------~~~~~~~~~~~~d~~~~~~~~--------   97 (450)
T PRK08261         34 GQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTWA--------AGWGDRFGALVFDATGITDPA--------   97 (450)
T ss_pred             CCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCccccccc--------cCcCCcccEEEEECCCCCCHH--------
Confidence            44555    8888999999999999999999998876544110        000112232333444333221        


Q ss_pred             HHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017812          135 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  214 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~  214 (365)
                                                    ++        .+.+.+++..++.|.+   .||||+++|..+.        
T Consensus        98 ------------------------------~l--------~~~~~~~~~~l~~l~~---~griv~i~s~~~~--------  128 (450)
T PRK08261         98 ------------------------------DL--------KALYEFFHPVLRSLAP---CGRVVVLGRPPEA--------  128 (450)
T ss_pred             ------------------------------HH--------HHHHHHHHHHHHhccC---CCEEEEEcccccc--------
Confidence                                          11        2334566777777754   4799999997654        


Q ss_pred             CccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCc
Q 017812          215 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGV  270 (365)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~  270 (365)
                                  .   ....|+.+|+++.++++++++|+    ..+++++.+.|+.
T Consensus       129 ------------~---~~~~~~~akaal~gl~rsla~E~----~~gi~v~~i~~~~  165 (450)
T PRK08261        129 ------------A---ADPAAAAAQRALEGFTRSLGKEL----RRGATAQLVYVAP  165 (450)
T ss_pred             ------------C---CchHHHHHHHHHHHHHHHHHHHh----hcCCEEEEEecCC
Confidence                        1   22459999999999999999999    4699999999885

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.73  E-value=5.9e-08  Score=88.93  Aligned_cols=84  Identities=17%  Similarity=0.152  Sum_probs=65.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCE-EEEEecCc---hhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFH-VVLVGRSS---HLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDS  131 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~-Vil~~r~~---~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~  131 (365)
                      ++++|+++|||| ||+|++++..|++.|++ |++++|+.   ++++++.+++.+.+  ..+....+|+++.+++.+.+  
T Consensus       123 ~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~--~~~~~~~~d~~~~~~~~~~~--  197 (289)
T PRK12548        123 DVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEV--PECIVNVYDLNDTEKLKAEI--  197 (289)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcC--CCceeEEechhhhhHHHhhh--
Confidence            367899999999 69999999999999985 99999997   67777777775543  24556678888776664432  


Q ss_pred             HHHHHhccCCCCCeeEEEecCCcc
Q 017812          132 LQQWLLDSDMHSSIQLLINNAGIL  155 (365)
Q Consensus       132 ~~~~~~~~~~~~~id~lv~nAG~~  155 (365)
                                 ...|+||||-.+.
T Consensus       198 -----------~~~DilINaTp~G  210 (289)
T PRK12548        198 -----------ASSDILVNATLVG  210 (289)
T ss_pred             -----------ccCCEEEEeCCCC
Confidence                       2369999988764

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=98.64  E-value=3.6e-07  Score=87.21  Aligned_cols=202  Identities=15%  Similarity=0.170  Sum_probs=125.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCC---CEEEEEecCch------h-----HHHHHHHHHhhcCC--CceEEEEecCC
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREG---FHVVLVGRSSH------L-----LSETMADITSRNKD--ARLEAFQVDLS  120 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G---~~Vil~~r~~~------~-----~~~~~~~l~~~~~~--~~~~~~~~Dls  120 (365)
                      +++|+++||||||++|+-+...|.+.-   -++++.-|...      +     .+.+-+.+.+..|+  .++..+..|++
T Consensus        10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~   89 (467)
T KOG1221|consen   10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDIS   89 (467)
T ss_pred             hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccccc
Confidence            579999999999999999999998764   27888877532      1     11222333444443  57888889998


Q ss_pred             ChhhH-HHHHHHHHHHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEE
Q 017812          121 SFQSV-LKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVN  199 (365)
Q Consensus       121 ~~~~v-~~~~~~~~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~  199 (365)
                      +++-- ..--.+.        ....+|++||.|+...-     .+.++....+|.+|+..+.+.+.....-    ...|.
T Consensus        90 ~~~LGis~~D~~~--------l~~eV~ivih~AAtvrF-----de~l~~al~iNt~Gt~~~l~lak~~~~l----~~~vh  152 (467)
T KOG1221|consen   90 EPDLGISESDLRT--------LADEVNIVIHSAATVRF-----DEPLDVALGINTRGTRNVLQLAKEMVKL----KALVH  152 (467)
T ss_pred             CcccCCChHHHHH--------HHhcCCEEEEeeeeecc-----chhhhhhhhhhhHhHHHHHHHHHHhhhh----heEEE
Confidence            76521 1111111        12469999999997533     3456778999999999999988766532    47888


Q ss_pred             EcCCccccccc--------ccC--CCcc-------cccc---ccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCC
Q 017812          200 VTSFTHRNVFN--------AQV--NNET-------ITGK---FFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSR  259 (365)
Q Consensus       200 vsS~~~~~~~~--------~~~--~~~~-------~~~~---~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~  259 (365)
                      ||+.-......        ...  +.+.       ....   ...+..-...-..|.-+|+-.+.+...-        ..
T Consensus       153 VSTAy~n~~~~~i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~--------~~  224 (467)
T KOG1221|consen  153 VSTAYSNCNVGHIEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKE--------AE  224 (467)
T ss_pred             eehhheecccccccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhh--------cc
Confidence            88876652210        001  1110       0000   0011111123456888998777665443        35


Q ss_pred             CeEEEEecCCcccCCccccchhHH
Q 017812          260 HVSVIAADPGVVKTNIMREVPSFL  283 (365)
Q Consensus       260 gi~v~~v~PG~v~T~~~~~~~~~~  283 (365)
                      ++.+..++|..|.+.....+|++.
T Consensus       225 ~lPivIiRPsiI~st~~EP~pGWi  248 (467)
T KOG1221|consen  225 NLPLVIIRPSIITSTYKEPFPGWI  248 (467)
T ss_pred             CCCeEEEcCCceeccccCCCCCcc
Confidence            677888999988776655555543

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.61  E-value=1.3e-07  Score=89.56  Aligned_cols=108  Identities=16%  Similarity=0.199  Sum_probs=72.5

Q ss_pred             CCCCCEEEEecC---------------CCh-HHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecC
Q 017812           56 GIKRPVCIVTGA---------------TSG-LGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDL  119 (365)
Q Consensus        56 ~~~~k~vlITGa---------------ssG-IG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl  119 (365)
                      +++||+++||||               ||| +|.++|++|+.+|++|++++++....          . ..  ....+|+
T Consensus       182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~----------~-~~--~~~~~~v  248 (390)
T TIGR00521       182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL----------T-PP--GVKSIKV  248 (390)
T ss_pred             ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC----------C-CC--CcEEEEe
Confidence            478999999999               777 99999999999999999998765321          1 11  2356899


Q ss_pred             CChhhH-HHHHHHHHHHHhccCCCCCeeEEEecCCcccCCC-CCCHHHH---hHhHHHHhHHHHHHHHHHh
Q 017812          120 SSFQSV-LKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS-RLTPEGY---DQMMSTNYIGAFFLTKLLL  185 (365)
Q Consensus       120 s~~~~v-~~~~~~~~~~~~~~~~~~~id~lv~nAG~~~~~~-~~~~~~~---~~~~~vN~~~~~~l~~~~l  185 (365)
                      ++.+++ +++.+++         .+.+|++|+|||+..... +.....+   +..+.+|+..+--+++.+.
T Consensus       249 ~~~~~~~~~~~~~~---------~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~  310 (390)
T TIGR00521       249 STAEEMLEAALNEL---------AKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVR  310 (390)
T ss_pred             ccHHHHHHHHHHhh---------cccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHHH
Confidence            998888 5454332         356999999999973322 1111112   1234456555555555543

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.61  E-value=4e-07  Score=78.57  Aligned_cols=83  Identities=24%  Similarity=0.266  Sum_probs=66.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      ++++++++|+||+|++|+.+++.|++.|++|++++|+.++++++.+++.+..   ......+|..+.+++.+.++     
T Consensus        25 ~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~---~~~~~~~~~~~~~~~~~~~~-----   96 (194)
T cd01078          25 DLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARF---GEGVGAVETSDDAARAAAIK-----   96 (194)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhc---CCcEEEeeCCCHHHHHHHHh-----
Confidence            4678999999999999999999999999999999999999888888775432   23455678888777655442     


Q ss_pred             HhccCCCCCeeEEEecCCc
Q 017812          136 LLDSDMHSSIQLLINNAGI  154 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~  154 (365)
                              ..|++|++...
T Consensus        97 --------~~diVi~at~~  107 (194)
T cd01078          97 --------GADVVFAAGAA  107 (194)
T ss_pred             --------cCCEEEECCCC
Confidence                    37888876654

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=98.60  E-value=2.8e-07  Score=81.81  Aligned_cols=199  Identities=16%  Similarity=0.113  Sum_probs=114.3

Q ss_pred             EEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhccCC
Q 017812           62 CIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDM  141 (365)
Q Consensus        62 vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~~~  141 (365)
                      |+||||+|.+|+.+++.|.+.|++|.++.|+..+  ...++++..    .++++.+|+.|.+++.+.++           
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~--~~~~~l~~~----g~~vv~~d~~~~~~l~~al~-----------   63 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSS--DRAQQLQAL----GAEVVEADYDDPESLVAALK-----------   63 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHH--HHHHHHHHT----TTEEEES-TT-HHHHHHHHT-----------
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccch--hhhhhhhcc----cceEeecccCCHHHHHHHHc-----------
Confidence            6899999999999999999999999999999842  233444433    34677999999988877653           


Q ss_pred             CCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcccccc
Q 017812          142 HSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGK  221 (365)
Q Consensus       142 ~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~~~~~  221 (365)
                        ++|.++++-+...+      ..        ......+++++...    + -.++| .||......         ..  
T Consensus        64 --g~d~v~~~~~~~~~------~~--------~~~~~~li~Aa~~a----g-Vk~~v-~ss~~~~~~---------~~--  110 (233)
T PF05368_consen   64 --GVDAVFSVTPPSHP------SE--------LEQQKNLIDAAKAA----G-VKHFV-PSSFGADYD---------ES--  110 (233)
T ss_dssp             --TCSEEEEESSCSCC------CH--------HHHHHHHHHHHHHH----T--SEEE-ESEESSGTT---------TT--
T ss_pred             --CCceEEeecCcchh------hh--------hhhhhhHHHhhhcc----c-cceEE-EEEeccccc---------cc--
Confidence              58999988886431      11        11223344444433    2 34776 455543300         00  


Q ss_pred             ccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHH----HHHHHHh---
Q 017812          222 FFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMA----FTVLKLL---  294 (365)
Q Consensus       222 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~----~~~~~~~---  294 (365)
                          ....|.. .+-..|+.++.+.+          ..++..+.|+||+.................    .....+.   
T Consensus       111 ----~~~~p~~-~~~~~k~~ie~~l~----------~~~i~~t~i~~g~f~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (233)
T PF05368_consen  111 ----SGSEPEI-PHFDQKAEIEEYLR----------ESGIPYTIIRPGFFMENLLPPFAPVVDIKKSKDVVTLPGPGNQK  175 (233)
T ss_dssp             ----TTSTTHH-HHHHHHHHHHHHHH----------HCTSEBEEEEE-EEHHHHHTTTHHTTCSCCTSSEEEEETTSTSE
T ss_pred             ----ccccccc-hhhhhhhhhhhhhh----------hccccceeccccchhhhhhhhhcccccccccceEEEEccCCCcc
Confidence                0112222 23346766654332          347888999999775443321111000000    0000000   


Q ss_pred             cCC-CCHHHHHHHHHHHhcCCCCC-cccEEeCC
Q 017812          295 GLL-QSPEKGINSVLDAALAPPET-SGVYFFGG  325 (365)
Q Consensus       295 ~~~-~~p~e~A~~i~~~~l~~~~~-~G~~~~~~  325 (365)
                      ..+ .+++|+|+.+..+++.++.. .|.++...
T Consensus       176 ~~~~~~~~Dvg~~va~il~~p~~~~~~~~~~~~  208 (233)
T PF05368_consen  176 AVPVTDTRDVGRAVAAILLDPEKHNNGKTIFLA  208 (233)
T ss_dssp             EEEEEHHHHHHHHHHHHHHSGGGTTEEEEEEEG
T ss_pred             ccccccHHHHHHHHHHHHcChHHhcCCEEEEeC
Confidence            022 38899999999888886655 57777643

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=98.53  E-value=9.8e-07  Score=77.79  Aligned_cols=209  Identities=15%  Similarity=0.070  Sum_probs=133.5

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      .++.|-++-|-||||.+|+.++.+|++.|-+|++-.|-.+.--   ..++-.+.-+++.++..|+.|+++|+++++.   
T Consensus        57 sS~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~---r~lkvmGdLGQvl~~~fd~~DedSIr~vvk~---  130 (391)
T KOG2865|consen   57 SSVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDP---RHLKVMGDLGQVLFMKFDLRDEDSIRAVVKH---  130 (391)
T ss_pred             ccccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccch---hheeecccccceeeeccCCCCHHHHHHHHHh---
Confidence            4577889999999999999999999999999999999654311   1222222235899999999999999998763   


Q ss_pred             HHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017812          135 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  214 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~  214 (365)
                                -+++||-.|.-.+....+      .-+||+.++-.+.+.+-..-     --|+|.+|+..+.        
T Consensus       131 ----------sNVVINLIGrd~eTknf~------f~Dvn~~~aerlAricke~G-----VerfIhvS~Lgan--------  181 (391)
T KOG2865|consen  131 ----------SNVVINLIGRDYETKNFS------FEDVNVHIAERLARICKEAG-----VERFIHVSCLGAN--------  181 (391)
T ss_pred             ----------CcEEEEeeccccccCCcc------cccccchHHHHHHHHHHhhC-----hhheeehhhcccc--------
Confidence                      578999998632222222      23678888888877763332     3489999997744        


Q ss_pred             CccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHh
Q 017812          215 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLL  294 (365)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  294 (365)
                                    ...-+-|--||++-+--+   +.++     +  ..+.|.|.-+-...-+-+......-......|+
T Consensus       182 --------------v~s~Sr~LrsK~~gE~aV---rdaf-----P--eAtIirPa~iyG~eDrfln~ya~~~rk~~~~pL  237 (391)
T KOG2865|consen  182 --------------VKSPSRMLRSKAAGEEAV---RDAF-----P--EATIIRPADIYGTEDRFLNYYASFWRKFGFLPL  237 (391)
T ss_pred             --------------ccChHHHHHhhhhhHHHH---HhhC-----C--cceeechhhhcccchhHHHHHHHHHHhcCceee
Confidence                          233456778888776433   2333     2  255678876654332222211111111111111


Q ss_pred             c--------CCCCHHHHHHHHHHHhcCCCCCcccEEe
Q 017812          295 G--------LLQSPEKGINSVLDAALAPPETSGVYFF  323 (365)
Q Consensus       295 ~--------~~~~p~e~A~~i~~~~l~~~~~~G~~~~  323 (365)
                      .        ...=+-|+|++|+.++ .++.+.|..|.
T Consensus       238 ~~~GekT~K~PVyV~DVaa~IvnAv-kDp~s~Gktye  273 (391)
T KOG2865|consen  238 IGKGEKTVKQPVYVVDVAAAIVNAV-KDPDSMGKTYE  273 (391)
T ss_pred             ecCCcceeeccEEEehHHHHHHHhc-cCccccCceee
Confidence            1        1223568999999644 55567777774

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.52  E-value=6e-07  Score=79.33  Aligned_cols=98  Identities=17%  Similarity=0.216  Sum_probs=66.0

Q ss_pred             CEEEEecCCCh-HHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhc
Q 017812           60 PVCIVTGATSG-LGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  138 (365)
Q Consensus        60 k~vlITGassG-IG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~  138 (365)
                      .+-.||+.|+| ||.++|++|+++|++|++++|+...        .. .+...+.++.++     +..++.+.+.+    
T Consensus        16 ~VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~--------~~-~~~~~v~~i~v~-----s~~~m~~~l~~----   77 (229)
T PRK06732         16 SVRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAV--------KP-EPHPNLSIIEIE-----NVDDLLETLEP----   77 (229)
T ss_pred             CceeecCccchHHHHHHHHHHHhCCCEEEEEECcccc--------cC-CCCCCeEEEEEe-----cHHHHHHHHHH----
Confidence            57889988766 9999999999999999999986421        00 011244555542     22333333333    


Q ss_pred             cCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHH
Q 017812          139 SDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGA  177 (365)
Q Consensus       139 ~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~  177 (365)
                        ..+.+|++|||||+..  +....+.+++.+++++|.+..
T Consensus        78 --~~~~~DivIh~AAvsd~~~~~~~~~~~~~~~~~v~~~~~  116 (229)
T PRK06732         78 --LVKDHDVLIHSMAVSDYTPVYMTDLEEVSASDNLNEFLT  116 (229)
T ss_pred             --HhcCCCEEEeCCccCCceehhhhhhhhhhhhhhhhhhhc
Confidence              2245899999999974  333457788888888876654

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=98.44  E-value=1.6e-06  Score=74.88  Aligned_cols=232  Identities=13%  Similarity=0.102  Sum_probs=139.4

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHH-HHHHHh---hcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSET-MADITS---RNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~-~~~l~~---~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      .|++||||-+|-=|..+|.-|..+|+.|..+-|..+..... ++-+-.   .+.+.....+..|++|...+.+++..++ 
T Consensus        28 rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~ik-  106 (376)
T KOG1372|consen   28 RKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTIK-  106 (376)
T ss_pred             ceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhccC-
Confidence            46999999999999999999999999999887765543322 122211   1224678888999999999998888764 


Q ss_pred             HHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017812          135 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  214 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~  214 (365)
                                ++=+.|.|+...  ...+.|--+-+-+|...|+..++.++...-...+  -|+---|+.--+.    .+.
T Consensus       107 ----------PtEiYnLaAQSH--VkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~--VrfYQAstSElyG----kv~  168 (376)
T KOG1372|consen  107 ----------PTEVYNLAAQSH--VKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEK--VRFYQASTSELYG----KVQ  168 (376)
T ss_pred             ----------chhhhhhhhhcc--eEEEeecccceeeccchhhhhHHHHHHhcCcccc--eeEEecccHhhcc----ccc
Confidence                      555677776532  2233344456778899999999998876544432  3444444433221    111


Q ss_pred             CccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHH--------
Q 017812          215 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLM--------  286 (365)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~--------  286 (365)
                      ..     .-.+..|+.+.++|+++|.+.-..+-..+..+..-.-.||-+|.=+|--=.+=.+|.+.......        
T Consensus       169 e~-----PQsE~TPFyPRSPYa~aKmy~~WivvNyREAYnmfAcNGILFNHESPRRGenFVTRKItRsvakI~~gqqe~~  243 (376)
T KOG1372|consen  169 EI-----PQSETTPFYPRSPYAAAKMYGYWIVVNYREAYNMFACNGILFNHESPRRGENFVTRKITRSVAKISLGQQEKI  243 (376)
T ss_pred             CC-----CcccCCCCCCCChhHHhhhhheEEEEEhHHhhcceeeccEeecCCCCccccchhhHHHHHHHHHhhhcceeeE
Confidence            11     11123688888999999987655554443333211146888887777532222222221111100        


Q ss_pred             HHHHHHHhcCCCCHHHHHHHHHHHhcCCC
Q 017812          287 AFTVLKLLGLLQSPEKGINSVLDAALAPP  315 (365)
Q Consensus       287 ~~~~~~~~~~~~~p~e~A~~i~~~~l~~~  315 (365)
                      ..-.+...+.++...|..++++. +|..+
T Consensus       244 ~LGNL~a~RDWGhA~dYVEAMW~-mLQ~d  271 (376)
T KOG1372|consen  244 ELGNLSALRDWGHAGDYVEAMWL-MLQQD  271 (376)
T ss_pred             EecchhhhcccchhHHHHHHHHH-HHhcC
Confidence            01111222345677888888873 44443

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=98.41  E-value=1.7e-06  Score=88.68  Aligned_cols=170  Identities=14%  Similarity=0.169  Sum_probs=131.8

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchh---HHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHL---LSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~---~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      .|..+|+||-||.|+++|..|..+|+ ++++++|+.-+   -...++.++..  +.++.+-..|++..+..+.++++.. 
T Consensus      1768 eksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~--GVqV~vsT~nitt~~ga~~Li~~s~- 1844 (2376)
T KOG1202|consen 1768 EKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRR--GVQVQVSTSNITTAEGARGLIEESN- 1844 (2376)
T ss_pred             cceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhc--CeEEEEecccchhhhhHHHHHHHhh-
Confidence            57899999999999999999999999 79999998533   11233444444  5677777788888888888888766 


Q ss_pred             HHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017812          135 WLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~  212 (365)
                            +.+++..++|-|.+..  -.++.++++|++.-+--+.|+.++-+.-...-..   -.-+|..||++.-      
T Consensus      1845 ------kl~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~---LdyFv~FSSvscG------ 1909 (2376)
T KOG1202|consen 1845 ------KLGPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPE---LDYFVVFSSVSCG------ 1909 (2376)
T ss_pred             ------hcccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcc---cceEEEEEeeccc------
Confidence                  4689999999999874  3567899999999999999999876654443322   2478888888765      


Q ss_pred             CCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEE
Q 017812          213 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVI  264 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~  264 (365)
                                    ++..++..|+-+..+++-.++.-+.+-    -||+.+.
T Consensus      1910 --------------RGN~GQtNYG~aNS~MERiceqRr~~G----fPG~AiQ 1943 (2376)
T KOG1202|consen 1910 --------------RGNAGQTNYGLANSAMERICEQRRHEG----FPGTAIQ 1943 (2376)
T ss_pred             --------------CCCCcccccchhhHHHHHHHHHhhhcC----CCcceee
Confidence                          788889999999999999997765442    4666554

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=98.40  E-value=5.5e-06  Score=78.01  Aligned_cols=131  Identities=20%  Similarity=0.184  Sum_probs=87.8

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      ...+-.+|+|+||+|++|+-+++.|.++|+.|.++.|+.++.+.... +  .........+..|.....++.....+.. 
T Consensus        75 ~~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~-~--~~~d~~~~~v~~~~~~~~d~~~~~~~~~-  150 (411)
T KOG1203|consen   75 NSKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLG-V--FFVDLGLQNVEADVVTAIDILKKLVEAV-  150 (411)
T ss_pred             CCCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhc-c--cccccccceeeeccccccchhhhhhhhc-
Confidence            34567799999999999999999999999999999999987766655 1  1113344556666665554433322221 


Q ss_pred             HHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccc
Q 017812          135 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHR  206 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~  206 (365)
                             .....+++.++|-.....     +.....+|.+.|+.++.+++...-     -.|+|++||+.+.
T Consensus       151 -------~~~~~~v~~~~ggrp~~e-----d~~~p~~VD~~g~knlvdA~~~aG-----vk~~vlv~si~~~  205 (411)
T KOG1203|consen  151 -------PKGVVIVIKGAGGRPEEE-----DIVTPEKVDYEGTKNLVDACKKAG-----VKRVVLVGSIGGT  205 (411)
T ss_pred             -------cccceeEEecccCCCCcc-----cCCCcceecHHHHHHHHHHHHHhC-----CceEEEEEeecCc
Confidence                   123556666666532221     233345677888888888883332     4599999998876

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.33  E-value=7.4e-05  Score=67.65  Aligned_cols=194  Identities=13%  Similarity=0.030  Sum_probs=116.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhccC
Q 017812           61 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  140 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~~  140 (365)
                      .++||||||.+|.+++++|.++|++|.+..|+.+++....         ..+.....|+.+++++...++          
T Consensus         2 ~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~---------~~v~~~~~d~~~~~~l~~a~~----------   62 (275)
T COG0702           2 KILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA---------GGVEVVLGDLRDPKSLVAGAK----------   62 (275)
T ss_pred             eEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc---------CCcEEEEeccCCHhHHHHHhc----------
Confidence            5899999999999999999999999999999998765543         367899999999988776543          


Q ss_pred             CCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCccccc
Q 017812          141 MHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITG  220 (365)
Q Consensus       141 ~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~~~~  220 (365)
                         ++|.+++..+... ...       ........+.....+...    .  ...+++.+|+..+.              
T Consensus        63 ---G~~~~~~i~~~~~-~~~-------~~~~~~~~~~~~~a~~a~----~--~~~~~~~~s~~~~~--------------  111 (275)
T COG0702          63 ---GVDGVLLISGLLD-GSD-------AFRAVQVTAVVRAAEAAG----A--GVKHGVSLSVLGAD--------------  111 (275)
T ss_pred             ---cccEEEEEecccc-ccc-------chhHHHHHHHHHHHHHhc----C--CceEEEEeccCCCC--------------
Confidence               4777777777543 111       122333344444444442    1  13578888887654              


Q ss_pred             cccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEec-CCcccCCccccchhHHHHHHHHHHHHh--cCC
Q 017812          221 KFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD-PGVVKTNIMREVPSFLSLMAFTVLKLL--GLL  297 (365)
Q Consensus       221 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~-PG~v~T~~~~~~~~~~~~~~~~~~~~~--~~~  297 (365)
                              ......|..+|...+...++          .|+.-..+. |+++.....................+-  -..
T Consensus       112 --------~~~~~~~~~~~~~~e~~l~~----------sg~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (275)
T COG0702         112 --------AASPSALARAKAAVEAALRS----------SGIPYTTLRRAAFYLGAGAAFIEAAEAAGLPVIPRGIGRLSP  173 (275)
T ss_pred             --------CCCccHHHHHHHHHHHHHHh----------cCCCeEEEecCeeeeccchhHHHHHHhhCCceecCCCCceee
Confidence                    13446789999887765533          455544444 444433221110000000000000000  124


Q ss_pred             CCHHHHHHHHHHHhcCCCCCcccEEe
Q 017812          298 QSPEKGINSVLDAALAPPETSGVYFF  323 (365)
Q Consensus       298 ~~p~e~A~~i~~~~l~~~~~~G~~~~  323 (365)
                      ...++++..+...+..+. ..|..|.
T Consensus       174 i~~~d~a~~~~~~l~~~~-~~~~~~~  198 (275)
T COG0702         174 IAVDDVAEALAAALDAPA-TAGRTYE  198 (275)
T ss_pred             eEHHHHHHHHHHHhcCCc-ccCcEEE
Confidence            688999999886554444 4444444

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.22  E-value=1.1e-05  Score=65.12  Aligned_cols=79  Identities=23%  Similarity=0.316  Sum_probs=59.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      ++++++++|-|+ ||.|++++..|++.|+ +|+++.|+.++++++.+++    ++..+.++.  +.+..   +.   +  
T Consensus         9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~----~~~~~~~~~--~~~~~---~~---~--   73 (135)
T PF01488_consen    9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEF----GGVNIEAIP--LEDLE---EA---L--   73 (135)
T ss_dssp             TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHH----TGCSEEEEE--GGGHC---HH---H--
T ss_pred             CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHc----Cccccceee--HHHHH---HH---H--
Confidence            578999999998 9999999999999998 5999999999998888887    123344443  33333   11   1  


Q ss_pred             HHhccCCCCCeeEEEecCCcccC
Q 017812          135 WLLDSDMHSSIQLLINNAGILAT  157 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~~  157 (365)
                              ...|++|++.+...+
T Consensus        74 --------~~~DivI~aT~~~~~   88 (135)
T PF01488_consen   74 --------QEADIVINATPSGMP   88 (135)
T ss_dssp             --------HTESEEEE-SSTTST
T ss_pred             --------hhCCeEEEecCCCCc
Confidence                    248999999887533

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=98.22  E-value=6.4e-05  Score=64.35  Aligned_cols=161  Identities=14%  Similarity=0.103  Sum_probs=98.7

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCC---EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGF---HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~---~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      +.++|||++|=+|+++.+.+..+|.   +.++.+.                       -.+|+++.++++++++..    
T Consensus         2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~s-----------------------kd~DLt~~a~t~~lF~~e----   54 (315)
T KOG1431|consen    2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGS-----------------------KDADLTNLADTRALFESE----   54 (315)
T ss_pred             ceEEEecCCchHHHHHHHHHHhcCCCCcceEEecc-----------------------ccccccchHHHHHHHhcc----
Confidence            5799999999999999999999886   3333322                       137999999999998753    


Q ss_pred             hccCCCCCeeEEEecCCcccCC-C--CCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc-cc
Q 017812          137 LDSDMHSSIQLLINNAGILATS-S--RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN-AQ  212 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~~~-~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~-~~  212 (365)
                             ++-.+||.|+..+.. .  .-+.|-+...+++    .-+.++.+..+-     -.++|+..|..-+..+. .+
T Consensus        55 -------kPthVIhlAAmVGGlf~N~~ynldF~r~Nl~i----ndNVlhsa~e~g-----v~K~vsclStCIfPdkt~yP  118 (315)
T KOG1431|consen   55 -------KPTHVIHLAAMVGGLFHNNTYNLDFIRKNLQI----NDNVLHSAHEHG-----VKKVVSCLSTCIFPDKTSYP  118 (315)
T ss_pred             -------CCceeeehHhhhcchhhcCCCchHHHhhccee----chhHHHHHHHhc-----hhhhhhhcceeecCCCCCCC
Confidence                   366777777654322 1  2234444433332    223333333321     23566666666553321 12


Q ss_pred             CCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCC
Q 017812          213 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTN  274 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~  274 (365)
                      ++...+..     ..+-|.+-.|+-+|..+.-..++.+.++      |-..+++-|-.+-.|
T Consensus       119 IdEtmvh~-----gpphpsN~gYsyAKr~idv~n~aY~~qh------g~~~tsviPtNvfGp  169 (315)
T KOG1431|consen  119 IDETMVHN-----GPPHPSNFGYSYAKRMIDVQNQAYRQQH------GRDYTSVIPTNVFGP  169 (315)
T ss_pred             CCHHHhcc-----CCCCCCchHHHHHHHHHHHHHHHHHHHh------CCceeeeccccccCC
Confidence            22222221     2566777889999988888888888765      445566666655443

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.21  E-value=6.3e-06  Score=77.44  Aligned_cols=76  Identities=28%  Similarity=0.394  Sum_probs=64.9

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCC-CEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhc
Q 017812           60 PVCIVTGATSGLGAAAAYALSREG-FHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  138 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G-~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~  138 (365)
                      +.+||-|| |+||+.+|+.|+++| .+|++.+|+.++++++....     ..++.++++|+.|.+.+.+++++       
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~-----~~~v~~~~vD~~d~~al~~li~~-------   68 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELI-----GGKVEALQVDAADVDALVALIKD-------   68 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhc-----cccceeEEecccChHHHHHHHhc-------
Confidence            46899999 999999999999999 79999999999988876665     34899999999998887776652       


Q ss_pred             cCCCCCeeEEEecCCc
Q 017812          139 SDMHSSIQLLINNAGI  154 (365)
Q Consensus       139 ~~~~~~id~lv~nAG~  154 (365)
                            .|++||++..
T Consensus        69 ------~d~VIn~~p~   78 (389)
T COG1748          69 ------FDLVINAAPP   78 (389)
T ss_pred             ------CCEEEEeCCc
Confidence                  3999999874

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=98.10  E-value=1.2e-05  Score=68.94  Aligned_cols=173  Identities=16%  Similarity=0.166  Sum_probs=113.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHC-CC-EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSRE-GF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  133 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~-G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~  133 (365)
                      +-+...|||||+-|-+|.++|..|..+ |. +|++.+-.....     ....     .--++-.|+-|..++++++-   
T Consensus        41 ~~~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~-----~V~~-----~GPyIy~DILD~K~L~eIVV---  107 (366)
T KOG2774|consen   41 TQKAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPA-----NVTD-----VGPYIYLDILDQKSLEEIVV---  107 (366)
T ss_pred             cCCCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCch-----hhcc-----cCCchhhhhhccccHHHhhc---
Confidence            345678999999999999999999866 54 777765543221     1111     11366788888888777653   


Q ss_pred             HHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          134 QWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       134 ~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                              +.+||-|||-.+......   +.......+||+.|.-++++.+..+      .-++..-|.+++.+.....-
T Consensus       108 --------n~RIdWL~HfSALLSAvG---E~NVpLA~~VNI~GvHNil~vAa~~------kL~iFVPSTIGAFGPtSPRN  170 (366)
T KOG2774|consen  108 --------NKRIDWLVHFSALLSAVG---ETNVPLALQVNIRGVHNILQVAAKH------KLKVFVPSTIGAFGPTSPRN  170 (366)
T ss_pred             --------ccccceeeeHHHHHHHhc---ccCCceeeeecchhhhHHHHHHHHc------CeeEeecccccccCCCCCCC
Confidence                    368999999877643322   2334456789999999998887555      23555556666654433333


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEe-cCCccc
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAA-DPGVVK  272 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v-~PG~v~  272 (365)
                      +.+++.        ...+...|+.||.-.+.+.+.+..++      |+.+-++ .||.+.
T Consensus       171 PTPdlt--------IQRPRTIYGVSKVHAEL~GEy~~hrF------g~dfr~~rfPg~is  216 (366)
T KOG2774|consen  171 PTPDLT--------IQRPRTIYGVSKVHAELLGEYFNHRF------GVDFRSMRFPGIIS  216 (366)
T ss_pred             CCCCee--------eecCceeechhHHHHHHHHHHHHhhc------CccceecccCcccc
Confidence            333322        22345789999999999999888765      4545544 366553

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=98.02  E-value=2.1e-05  Score=71.65  Aligned_cols=82  Identities=16%  Similarity=0.248  Sum_probs=71.3

Q ss_pred             EEEEecCCChHHHHHHHHHHH----CCCEEEEEecCchhHHHHHHHHHhhcCC--CceEEEEecCCChhhHHHHHHHHHH
Q 017812           61 VCIVTGATSGLGAAAAYALSR----EGFHVVLVGRSSHLLSETMADITSRNKD--ARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~----~G~~Vil~~r~~~~~~~~~~~l~~~~~~--~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      -++|-||||.-|..++.++.+    .|..+-+.+||+++++++.+.+.+..+.  .....+.||.+|++++++++.+   
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~---   83 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQ---   83 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhh---
Confidence            489999999999999999999    7889999999999999999999887643  2334889999999999998765   


Q ss_pred             HHhccCCCCCeeEEEecCCcc
Q 017812          135 WLLDSDMHSSIQLLINNAGIL  155 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~  155 (365)
                                -.++||++|..
T Consensus        84 ----------~~vivN~vGPy   94 (423)
T KOG2733|consen   84 ----------ARVIVNCVGPY   94 (423)
T ss_pred             ----------hEEEEeccccc
Confidence                      56899999965

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=98.02  E-value=0.0001  Score=68.12  Aligned_cols=145  Identities=13%  Similarity=0.093  Sum_probs=86.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .|++++|+|+++++|.++++.+...|++|++++++.++.+.+. ++     +.+   ..+|..+.+..+.+.+..     
T Consensus       144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~-----g~~---~~~~~~~~~~~~~~~~~~-----  209 (325)
T cd08253         144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVR-QA-----GAD---AVFNYRAEDLADRILAAT-----  209 (325)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-Hc-----CCC---EEEeCCCcCHHHHHHHHc-----
Confidence            4789999999999999999999999999999999887665542 22     221   224555544444332221     


Q ss_pred             ccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcc
Q 017812          138 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNET  217 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~  217 (365)
                         ...++|++++++|..         ..+.               ....+..   .|+++.+++....    ..++...
T Consensus       210 ---~~~~~d~vi~~~~~~---------~~~~---------------~~~~l~~---~g~~v~~~~~~~~----~~~~~~~  255 (325)
T cd08253         210 ---AGQGVDVIIEVLANV---------NLAK---------------DLDVLAP---GGRIVVYGSGGLR----GTIPINP  255 (325)
T ss_pred             ---CCCceEEEEECCchH---------HHHH---------------HHHhhCC---CCEEEEEeecCCc----CCCChhH
Confidence               224699999998741         0111               1122222   4899999875411    1111111


Q ss_pred             ccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhC
Q 017812          218 ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLG  254 (365)
Q Consensus       218 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~  254 (365)
                      +    +...........|..+|.....+.+.+...+.
T Consensus       256 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (325)
T cd08253         256 L----MAKEASIRGVLLYTATPEERAAAAEAIAAGLA  288 (325)
T ss_pred             H----HhcCceEEeeehhhcCHHHHHHHHHHHHHHHH
Confidence            0    00011223334677778777777777766654

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=98.00  E-value=0.00038  Score=57.87  Aligned_cols=198  Identities=14%  Similarity=0.053  Sum_probs=119.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhccC
Q 017812           61 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  140 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~~  140 (365)
                      .+-|.||||-.|..++++..++|..|+.+.||+++..+.          ..+..++.|+.|++++.+.+           
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~----------~~~~i~q~Difd~~~~a~~l-----------   60 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR----------QGVTILQKDIFDLTSLASDL-----------   60 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc----------ccceeecccccChhhhHhhh-----------
Confidence            477899999999999999999999999999999875432          35678999999999874432           


Q ss_pred             CCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCccccc
Q 017812          141 MHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITG  220 (365)
Q Consensus       141 ~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~~~~  220 (365)
                        .+.|++|..-|...+..    +  +...        .-.+++...++..+ ..|++.|+..++...-++    ..+-+
T Consensus        61 --~g~DaVIsA~~~~~~~~----~--~~~~--------k~~~~li~~l~~ag-v~RllVVGGAGSL~id~g----~rLvD  119 (211)
T COG2910          61 --AGHDAVISAFGAGASDN----D--ELHS--------KSIEALIEALKGAG-VPRLLVVGGAGSLEIDEG----TRLVD  119 (211)
T ss_pred             --cCCceEEEeccCCCCCh----h--HHHH--------HHHHHHHHHHhhcC-CeeEEEEcCccceEEcCC----ceeec
Confidence              35899998888653211    1  1111        11445555555544 679999998776532221    11111


Q ss_pred             cccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcccc--chhHHHHHHHHHHHHhc-CC
Q 017812          221 KFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE--VPSFLSLMAFTVLKLLG-LL  297 (365)
Q Consensus       221 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~--~~~~~~~~~~~~~~~~~-~~  297 (365)
                            .|..+..-|..+++..+. -+.|+.+      .++.-+-++|...-.|.-+.  ..-.......   .--| -.
T Consensus       120 ------~p~fP~ey~~~A~~~ae~-L~~Lr~~------~~l~WTfvSPaa~f~PGerTg~yrlggD~ll~---n~~G~Sr  183 (211)
T COG2910         120 ------TPDFPAEYKPEALAQAEF-LDSLRAE------KSLDWTFVSPAAFFEPGERTGNYRLGGDQLLV---NAKGESR  183 (211)
T ss_pred             ------CCCCchhHHHHHHHHHHH-HHHHhhc------cCcceEEeCcHHhcCCccccCceEeccceEEE---cCCCcee
Confidence                  333344445666655443 3455543      45888888988765552221  0000000000   0000 12


Q ss_pred             CCHHHHHHHHHHHhcCCCC
Q 017812          298 QSPEKGINSVLDAALAPPE  316 (365)
Q Consensus       298 ~~p~e~A~~i~~~~l~~~~  316 (365)
                      .|-+|.|-++++-+..+..
T Consensus       184 IS~aDYAiA~lDe~E~~~h  202 (211)
T COG2910         184 ISYADYAIAVLDELEKPQH  202 (211)
T ss_pred             eeHHHHHHHHHHHHhcccc
Confidence            4788888888876655543

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.00  E-value=2.1e-05  Score=75.30  Aligned_cols=76  Identities=29%  Similarity=0.398  Sum_probs=59.6

Q ss_pred             EEEecCCChHHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhcc
Q 017812           62 CIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  139 (365)
Q Consensus        62 vlITGassGIG~~~a~~la~~G~--~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~  139 (365)
                      |+|-|| |.+|+.+++.|++++-  +|++.+|+.++++++.+++    .+.++..+++|+.|.+++.++++         
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~----~~~~~~~~~~d~~~~~~l~~~~~---------   66 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL----LGDRVEAVQVDVNDPESLAELLR---------   66 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT------TTTTEEEEE--TTTHHHHHHHHT---------
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc----cccceeEEEEecCCHHHHHHHHh---------
Confidence            689999 9999999999999984  8999999999988887765    25689999999999998877654         


Q ss_pred             CCCCCeeEEEecCCcc
Q 017812          140 DMHSSIQLLINNAGIL  155 (365)
Q Consensus       140 ~~~~~id~lv~nAG~~  155 (365)
                          ..|++||++|..
T Consensus        67 ----~~dvVin~~gp~   78 (386)
T PF03435_consen   67 ----GCDVVINCAGPF   78 (386)
T ss_dssp             ----TSSEEEE-SSGG
T ss_pred             ----cCCEEEECCccc
Confidence                259999999964

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PRK09620 hypothetical protein; Provisional

Probab=98.00  E-value=1e-05  Score=71.28  Aligned_cols=36  Identities=22%  Similarity=0.319  Sum_probs=32.7

Q ss_pred             CCCCEEEEecCC----------------ChHHHHHHHHHHHCCCEEEEEecC
Q 017812           57 IKRPVCIVTGAT----------------SGLGAAAAYALSREGFHVVLVGRS   92 (365)
Q Consensus        57 ~~~k~vlITGas----------------sGIG~~~a~~la~~G~~Vil~~r~   92 (365)
                      ++||.||||+|.                |.||.++|++|.++|++|+++++.
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~   52 (229)
T PRK09620          1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGY   52 (229)
T ss_pred             CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCC
Confidence            468999999886                999999999999999999998864

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.98  E-value=2.6e-05  Score=76.34  Aligned_cols=77  Identities=21%  Similarity=0.298  Sum_probs=58.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCc-hhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS-HLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      ++++|+|+|+|+++ +|.++|+.|+++|++|++++++. +..++..+++.+.    .+.++..|..+.            
T Consensus         2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~------------   64 (450)
T PRK14106          2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGEL----GIELVLGEYPEE------------   64 (450)
T ss_pred             CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc----CCEEEeCCcchh------------
Confidence            46789999999888 99999999999999999999985 4444444555332    355777787761            


Q ss_pred             HHhccCCCCCeeEEEecCCcc
Q 017812          135 WLLDSDMHSSIQLLINNAGIL  155 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~  155 (365)
                            ..+.+|++|+++|+.
T Consensus        65 ------~~~~~d~vv~~~g~~   79 (450)
T PRK14106         65 ------FLEGVDLVVVSPGVP   79 (450)
T ss_pred             ------HhhcCCEEEECCCCC
Confidence                  114589999999974

>PLN00106 malate dehydrogenase

Probab=97.98  E-value=0.00012  Score=67.83  Aligned_cols=162  Identities=15%  Similarity=0.160  Sum_probs=97.9

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~--~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      .+.|.|||++|.+|..+|..|+.+|.  +++++++++.  +....++.....  ..  ...|+++.++..+.        
T Consensus        18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~--~g~a~Dl~~~~~--~~--~i~~~~~~~d~~~~--------   83 (323)
T PLN00106         18 GFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANT--PGVAADVSHINT--PA--QVRGFLGDDQLGDA--------   83 (323)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCC--CeeEchhhhCCc--Cc--eEEEEeCCCCHHHH--------
Confidence            46899999999999999999998775  8999999872  221223332211  11  22343333333322        


Q ss_pred             hccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017812          137 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  216 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~  216 (365)
                           ....|++|+.||..... .   ...++.+..|+.....+.+.+    .+.. +.++|+++|--.....       
T Consensus        84 -----l~~aDiVVitAG~~~~~-g---~~R~dll~~N~~i~~~i~~~i----~~~~-p~aivivvSNPvD~~~-------  142 (323)
T PLN00106         84 -----LKGADLVIIPAGVPRKP-G---MTRDDLFNINAGIVKTLCEAV----AKHC-PNALVNIISNPVNSTV-------  142 (323)
T ss_pred             -----cCCCCEEEEeCCCCCCC-C---CCHHHHHHHHHHHHHHHHHHH----HHHC-CCeEEEEeCCCccccH-------
Confidence                 24599999999985332 2   235667888887755555555    4443 3345555553221000       


Q ss_pred             cccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCC
Q 017812          217 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGL  255 (365)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~  255 (365)
                      ...........++|+...|+.++.-...|...++.++..
T Consensus       143 ~i~t~~~~~~s~~p~~~viG~~~LDs~Rl~~~lA~~lgv  181 (323)
T PLN00106        143 PIAAEVLKKAGVYDPKKLFGVTTLDVVRANTFVAEKKGL  181 (323)
T ss_pred             HHHHHHHHHcCCCCcceEEEEecchHHHHHHHHHHHhCC
Confidence            000000111256777888999987777888888988863

>PRK14982 acyl-ACP reductase; Provisional

Probab=97.92  E-value=4.5e-05  Score=70.87  Aligned_cols=48  Identities=29%  Similarity=0.464  Sum_probs=41.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHC-C-CEEEEEecCchhHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSRE-G-FHVVLVGRSSHLLSETMADI  103 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~-G-~~Vil~~r~~~~~~~~~~~l  103 (365)
                      ++++|+|+||||+|.||..++++|+++ | .+|++++|+.+++.++.+++
T Consensus       152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el  201 (340)
T PRK14982        152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAEL  201 (340)
T ss_pred             CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHh
Confidence            578999999999999999999999865 6 49999999988887766554

>PTZ00325 malate dehydrogenase; Provisional

Probab=97.86  E-value=0.00042  Score=64.22  Aligned_cols=163  Identities=17%  Similarity=0.142  Sum_probs=96.1

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCC--CEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREG--FHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G--~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      ++.+.|.|||++|.||..+|..|+.+|  .++++++++.  ++....++.....  .  ....+.+|+.+..+.      
T Consensus         6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~--~~g~a~Dl~~~~~--~--~~v~~~td~~~~~~~------   73 (321)
T PTZ00325          6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVG--APGVAADLSHIDT--P--AKVTGYADGELWEKA------   73 (321)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCC--CcccccchhhcCc--C--ceEEEecCCCchHHH------
Confidence            356689999999999999999999766  4899999943  2222234433221  2  233455554442221      


Q ss_pred             HHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017812          135 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  214 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~  214 (365)
                             ....|++|++||..... .   +...+.+..|+...-.+.+.+.++    + ..++|+++|.-......-.. 
T Consensus        74 -------l~gaDvVVitaG~~~~~-~---~tR~dll~~N~~i~~~i~~~i~~~----~-~~~iviv~SNPvdv~~~~~~-  136 (321)
T PTZ00325         74 -------LRGADLVLICAGVPRKP-G---MTRDDLFNTNAPIVRDLVAAVASS----A-PKAIVGIVSNPVNSTVPIAA-  136 (321)
T ss_pred             -------hCCCCEEEECCCCCCCC-C---CCHHHHHHHHHHHHHHHHHHHHHH----C-CCeEEEEecCcHHHHHHHHH-
Confidence                   13599999999985321 1   235567888887666666555443    3 45788877754331110000 


Q ss_pred             CccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhC
Q 017812          215 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLG  254 (365)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~  254 (365)
                            .......++|+...|+.+-.=-.-|-..+++.+.
T Consensus       137 ------~~~~~~sg~p~~~viG~g~LDs~R~r~~la~~l~  170 (321)
T PTZ00325        137 ------ETLKKAGVYDPRKLFGVTTLDVVRARKFVAEALG  170 (321)
T ss_pred             ------hhhhhccCCChhheeechhHHHHHHHHHHHHHhC
Confidence                  0001125667777888873333345556676664

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=97.83  E-value=0.00027  Score=58.30  Aligned_cols=157  Identities=17%  Similarity=0.085  Sum_probs=99.7

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~--~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      ++++.++|.||||-.|..+.+++++.+-  +|+++.|.+.--.+         .+..+.....|.+.+++...       
T Consensus        16 mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~a---------t~k~v~q~~vDf~Kl~~~a~-------   79 (238)
T KOG4039|consen   16 MQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPA---------TDKVVAQVEVDFSKLSQLAT-------   79 (238)
T ss_pred             hhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCcc---------ccceeeeEEechHHHHHHHh-------
Confidence            6788999999999999999999999994  99999997421111         03456667788877665433       


Q ss_pred             HHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017812          135 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  214 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~  214 (365)
                            ....+|+++++-|......     +.+....|..--...+.+++    ++.+ -.+++.+||..+.        
T Consensus        80 ------~~qg~dV~FcaLgTTRgka-----GadgfykvDhDyvl~~A~~A----Ke~G-ck~fvLvSS~GAd--------  135 (238)
T KOG4039|consen   80 ------NEQGPDVLFCALGTTRGKA-----GADGFYKVDHDYVLQLAQAA----KEKG-CKTFVLVSSAGAD--------  135 (238)
T ss_pred             ------hhcCCceEEEeeccccccc-----ccCceEeechHHHHHHHHHH----HhCC-CeEEEEEeccCCC--------
Confidence                  2346999999999753221     12222333333233333333    2322 3479999998865        


Q ss_pred             CccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcc
Q 017812          215 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIM  276 (365)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~  276 (365)
                                    ....-.|-..|.-++.=+..|.-         =++..++||.+..+-.
T Consensus       136 --------------~sSrFlY~k~KGEvE~~v~eL~F---------~~~~i~RPG~ll~~R~  174 (238)
T KOG4039|consen  136 --------------PSSRFLYMKMKGEVERDVIELDF---------KHIIILRPGPLLGERT  174 (238)
T ss_pred             --------------cccceeeeeccchhhhhhhhccc---------cEEEEecCcceecccc
Confidence                          12234577778766654433321         1577899999865443

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=97.81  E-value=0.00034  Score=65.22  Aligned_cols=80  Identities=20%  Similarity=0.299  Sum_probs=57.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .+++++|+|+++++|.++++.+...|++|++++++.++.+.+. .+     +..   ..+|..+.+..+.+.+..     
T Consensus       166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~-----~~~---~~~~~~~~~~~~~~~~~~-----  231 (342)
T cd08266         166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAK-EL-----GAD---YVIDYRKEDFVREVRELT-----  231 (342)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-Hc-----CCC---eEEecCChHHHHHHHHHh-----
Confidence            4789999999999999999999999999999999987655432 21     211   224555555544443322     


Q ss_pred             ccCCCCCeeEEEecCCc
Q 017812          138 DSDMHSSIQLLINNAGI  154 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~  154 (365)
                         ...++|++++++|.
T Consensus       232 ---~~~~~d~~i~~~g~  245 (342)
T cd08266         232 ---GKRGVDVVVEHVGA  245 (342)
T ss_pred             ---CCCCCcEEEECCcH
Confidence               22469999999983

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=97.69  E-value=0.001  Score=54.09  Aligned_cols=115  Identities=13%  Similarity=0.262  Sum_probs=75.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhhcCC--CceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           61 VCIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRNKD--ARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G~--~Vil~~r~~~~~~~~~~~l~~~~~~--~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      .|.|.||+|.+|.++|..|..++.  +++++++++++++....++......  .......   .+.+.+           
T Consensus         2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~---~~~~~~-----------   67 (141)
T PF00056_consen    2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS---GDYEAL-----------   67 (141)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE---SSGGGG-----------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc---cccccc-----------
Confidence            488999999999999999999985  8999999998888877777654222  2222222   333332           


Q ss_pred             hccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCC
Q 017812          137 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSF  203 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~  203 (365)
                            ..-|++|..||.... +..+   -.+.++.|..    +.+.+.+.+.+....+.++.+|..
T Consensus        68 ------~~aDivvitag~~~~-~g~s---R~~ll~~N~~----i~~~~~~~i~~~~p~~~vivvtNP  120 (141)
T PF00056_consen   68 ------KDADIVVITAGVPRK-PGMS---RLDLLEANAK----IVKEIAKKIAKYAPDAIVIVVTNP  120 (141)
T ss_dssp             ------TTESEEEETTSTSSS-TTSS---HHHHHHHHHH----HHHHHHHHHHHHSTTSEEEE-SSS
T ss_pred             ------ccccEEEEecccccc-cccc---HHHHHHHhHh----HHHHHHHHHHHhCCccEEEEeCCc
Confidence                  348999999998532 2223   2334555554    444445544444445777777653

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.68  E-value=0.00019  Score=59.21  Aligned_cols=76  Identities=22%  Similarity=0.354  Sum_probs=56.1

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCC-CEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREG-FHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G-~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      +++++++|+|+ |++|.++++.|++.| .+|++++|+.++.++..+++....       +..+.++.++.      +   
T Consensus        17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~-------~~~~~~~~~~~------~---   79 (155)
T cd01065          17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG-------IAIAYLDLEEL------L---   79 (155)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc-------cceeecchhhc------c---
Confidence            46789999998 899999999999996 789999999988877776664321       22333443322      1   


Q ss_pred             HhccCCCCCeeEEEecCCccc
Q 017812          136 LLDSDMHSSIQLLINNAGILA  156 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~  156 (365)
                             ...|++|++.+...
T Consensus        80 -------~~~Dvvi~~~~~~~   93 (155)
T cd01065          80 -------AEADLIINTTPVGM   93 (155)
T ss_pred             -------ccCCEEEeCcCCCC
Confidence                   35899999998643

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=97.65  E-value=0.00038  Score=64.87  Aligned_cols=117  Identities=9%  Similarity=0.085  Sum_probs=67.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHCC-------CEEEEEecCch--hHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHH
Q 017812           61 VCIVTGATSGLGAAAAYALSREG-------FHVVLVGRSSH--LLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDS  131 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G-------~~Vil~~r~~~--~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~  131 (365)
                      .|+||||+|.+|.+++..|+..+       ..|+++++++.  +++....++....     .....|+....+..+    
T Consensus         4 kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~-----~~~~~~~~~~~~~~~----   74 (325)
T cd01336           4 RVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCA-----FPLLKSVVATTDPEE----   74 (325)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhcc-----ccccCCceecCCHHH----
Confidence            49999999999999999999855       48999999653  1221111111100     011112222222111    


Q ss_pred             HHHHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCC-CCCeEEEEcCC
Q 017812          132 LQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP-VPSRIVNVTSF  203 (365)
Q Consensus       132 ~~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~-~~g~iV~vsS~  203 (365)
                               .....|++|+.||+.... ..+.   ++.++.|+.    +.+.+.+.+.+.. ..+.++++|..
T Consensus        75 ---------~l~~aDiVI~tAG~~~~~-~~~R---~~l~~~N~~----i~~~i~~~i~~~~~~~~iiivvsNP  130 (325)
T cd01336          75 ---------AFKDVDVAILVGAMPRKE-GMER---KDLLKANVK----IFKEQGEALDKYAKKNVKVLVVGNP  130 (325)
T ss_pred             ---------HhCCCCEEEEeCCcCCCC-CCCH---HHHHHHHHH----HHHHHHHHHHHhCCCCeEEEEecCc
Confidence                     124599999999986432 2222   445566654    4455555555542 25778887753

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=97.62  E-value=0.00076  Score=63.27  Aligned_cols=80  Identities=16%  Similarity=0.218  Sum_probs=53.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .|.+++|+||+|++|..++..+...|++|+.++++.++.+.+.+.+     +.. .+  .|..+.++..+.   +.+.  
T Consensus       151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~l-----Ga~-~v--i~~~~~~~~~~~---i~~~--  217 (338)
T cd08295         151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKL-----GFD-DA--FNYKEEPDLDAA---LKRY--  217 (338)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc-----CCc-ee--EEcCCcccHHHH---HHHh--
Confidence            4889999999999999999888889999999999988766554433     221 11  232222222222   2221  


Q ss_pred             ccCCCCCeeEEEecCC
Q 017812          138 DSDMHSSIQLLINNAG  153 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG  153 (365)
                         ..+++|+++.+.|
T Consensus       218 ---~~~gvd~v~d~~g  230 (338)
T cd08295         218 ---FPNGIDIYFDNVG  230 (338)
T ss_pred             ---CCCCcEEEEECCC
Confidence               1146999999887

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=97.59  E-value=0.00084  Score=62.61  Aligned_cols=80  Identities=13%  Similarity=0.126  Sum_probs=53.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .|.+|+|+||+|++|..++......|++|+.+++++++.+.+ +++     +.. .  ..|..+.+...+.....     
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~-~~l-----Ga~-~--vi~~~~~~~~~~~~~~~-----  203 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYL-KKL-----GFD-V--AFNYKTVKSLEETLKKA-----  203 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc-----CCC-E--EEeccccccHHHHHHHh-----
Confidence            478999999999999999988888899999999988776554 233     322 1  22333322333333222     


Q ss_pred             ccCCCCCeeEEEecCCc
Q 017812          138 DSDMHSSIQLLINNAGI  154 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~  154 (365)
                         ..+++|+++.+.|.
T Consensus       204 ---~~~gvdvv~d~~G~  217 (325)
T TIGR02825       204 ---SPDGYDCYFDNVGG  217 (325)
T ss_pred             ---CCCCeEEEEECCCH
Confidence               12469999998873

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=97.57  E-value=0.00097  Score=62.95  Aligned_cols=81  Identities=16%  Similarity=0.136  Sum_probs=54.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .|.+++|+||+|++|..++......|++|+.++++.++.+.+.+++     +.. .  ..|-.+.++..+.+.+.     
T Consensus       158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~l-----Ga~-~--vi~~~~~~~~~~~i~~~-----  224 (348)
T PLN03154        158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL-----GFD-E--AFNYKEEPDLDAALKRY-----  224 (348)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhc-----CCC-E--EEECCCcccHHHHHHHH-----
Confidence            4789999999999999999888888999999999887765554343     222 1  12332222232222221     


Q ss_pred             ccCCCCCeeEEEecCCc
Q 017812          138 DSDMHSSIQLLINNAGI  154 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~  154 (365)
                         ..+++|+++.+.|.
T Consensus       225 ---~~~gvD~v~d~vG~  238 (348)
T PLN03154        225 ---FPEGIDIYFDNVGG  238 (348)
T ss_pred             ---CCCCcEEEEECCCH
Confidence               12469999998883

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.54  E-value=0.00053  Score=62.34  Aligned_cols=48  Identities=19%  Similarity=0.274  Sum_probs=42.7

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHh
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITS  105 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~  105 (365)
                      .++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++..
T Consensus       115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~  162 (270)
T TIGR00507       115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQR  162 (270)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhh
Confidence            35789999999 6999999999999999999999999988888777644

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=97.53  E-value=0.0021  Score=57.91  Aligned_cols=84  Identities=19%  Similarity=0.275  Sum_probs=56.3

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCc-------------------hhHHHHHHHHHhhcCCCceEEEE
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSS-------------------HLLSETMADITSRNKDARLEAFQ  116 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~  116 (365)
                      +++..|+|.|+ ||+|.++|+.|++.|. ++++++.+.                   .+.+.+.+.+.+.+|..++..+.
T Consensus        28 L~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~  106 (268)
T PRK15116         28 FADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVD  106 (268)
T ss_pred             hcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEe
Confidence            67788999987 6899999999999995 899998752                   23445566666667666666653


Q ss_pred             ecCCChhhHHHHHHHHHHHHhccCCCCCeeEEEecCCc
Q 017812          117 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI  154 (365)
Q Consensus       117 ~Dls~~~~v~~~~~~~~~~~~~~~~~~~id~lv~nAG~  154 (365)
                      - .-+.+.+..++            ....|++|.+.+.
T Consensus       107 ~-~i~~e~~~~ll------------~~~~D~VIdaiD~  131 (268)
T PRK15116        107 D-FITPDNVAEYM------------SAGFSYVIDAIDS  131 (268)
T ss_pred             c-ccChhhHHHHh------------cCCCCEEEEcCCC
Confidence            2 22333333322            1347888877663

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=97.52  E-value=0.0021  Score=56.71  Aligned_cols=83  Identities=18%  Similarity=0.277  Sum_probs=60.5

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCc-------------------hhHHHHHHHHHhhcCCCceEEEE
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSS-------------------HLLSETMADITSRNKDARLEAFQ  116 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~  116 (365)
                      +++.+|+|.|+ ||+|.++++.|++.|. ++++++.+.                   .+.+.+.+.+.+.+|..++..+.
T Consensus         9 L~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~   87 (231)
T cd00755           9 LRNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVE   87 (231)
T ss_pred             HhCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEee
Confidence            56778999987 6799999999999997 899998752                   35666677777888877777777


Q ss_pred             ecCCChhhHHHHHHHHHHHHhccCCCCCeeEEEecCC
Q 017812          117 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAG  153 (365)
Q Consensus       117 ~Dls~~~~v~~~~~~~~~~~~~~~~~~~id~lv~nAG  153 (365)
                      ..++. ++...++            ....|++|.+..
T Consensus        88 ~~i~~-~~~~~l~------------~~~~D~VvdaiD  111 (231)
T cd00755          88 EFLTP-DNSEDLL------------GGDPDFVVDAID  111 (231)
T ss_pred             eecCH-hHHHHHh------------cCCCCEEEEcCC
Confidence            66653 2332222            134888887754

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.52  E-value=0.0007  Score=63.40  Aligned_cols=83  Identities=20%  Similarity=0.355  Sum_probs=65.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCc---------------------hhHHHHHHHHHhhcCCCceE
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSS---------------------HLLSETMADITSRNKDARLE  113 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~---------------------~~~~~~~~~l~~~~~~~~~~  113 (365)
                      .+++++|+|.|+ ||+|.++|+.|++.|. ++++++++.                     .+.+.+.+.+.+.+++.++.
T Consensus        21 ~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~   99 (338)
T PRK12475         21 KIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIV   99 (338)
T ss_pred             hhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEE
Confidence            467889999997 7799999999999998 999999973                     46777788888888888888


Q ss_pred             EEEecCCChhhHHHHHHHHHHHHhccCCCCCeeEEEecCC
Q 017812          114 AFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAG  153 (365)
Q Consensus       114 ~~~~Dls~~~~v~~~~~~~~~~~~~~~~~~~id~lv~nAG  153 (365)
                      .+..|++. +.+.+++             ...|++|.+..
T Consensus       100 ~~~~~~~~-~~~~~~~-------------~~~DlVid~~D  125 (338)
T PRK12475        100 PVVTDVTV-EELEELV-------------KEVDLIIDATD  125 (338)
T ss_pred             EEeccCCH-HHHHHHh-------------cCCCEEEEcCC
Confidence            88888863 3333332             24788887654

>cd08293 PTGR2 Prostaglandin reductase

Probab=97.50  E-value=0.0017  Score=61.01  Aligned_cols=79  Identities=18%  Similarity=0.217  Sum_probs=53.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      |.+|+|+||+|++|..++......|+ +|+.+++++++.+.+.+++     +... +  .|..+ ++..+.   +.+.  
T Consensus       155 ~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~l-----Ga~~-v--i~~~~-~~~~~~---i~~~--  220 (345)
T cd08293         155 NQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSEL-----GFDA-A--INYKT-DNVAER---LREL--  220 (345)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhc-----CCcE-E--EECCC-CCHHHH---HHHH--
Confidence            48999999999999999888888898 8999999988766655544     3221 1  23332 222222   2221  


Q ss_pred             ccCCCCCeeEEEecCCc
Q 017812          138 DSDMHSSIQLLINNAGI  154 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~  154 (365)
                         ..+++|+++++.|.
T Consensus       221 ---~~~gvd~vid~~g~  234 (345)
T cd08293         221 ---CPEGVDVYFDNVGG  234 (345)
T ss_pred             ---CCCCceEEEECCCc
Confidence               12469999998874

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.50  E-value=0.00039  Score=59.13  Aligned_cols=78  Identities=22%  Similarity=0.347  Sum_probs=46.2

Q ss_pred             CCCCEEEEecC----------------CChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCC
Q 017812           57 IKRPVCIVTGA----------------TSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS  120 (365)
Q Consensus        57 ~~~k~vlITGa----------------ssGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls  120 (365)
                      ++||.||||+|                ||-.|.++|++++.+|++|+++..... +..          ...+..+  ++.
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~~----------p~~~~~i--~v~   67 (185)
T PF04127_consen    1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSS-LPP----------PPGVKVI--RVE   67 (185)
T ss_dssp             -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS---------------TTEEEE--E-S
T ss_pred             CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcc-ccc----------cccceEE--Eec
Confidence            46888888876                678999999999999999999988742 110          2234343  445


Q ss_pred             ChhhHHHHHHHHHHHHhccCCCCCeeEEEecCCccc
Q 017812          121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA  156 (365)
Q Consensus       121 ~~~~v~~~~~~~~~~~~~~~~~~~id~lv~nAG~~~  156 (365)
                      +.+++   .+.+.+.+      ..-|++|++|++..
T Consensus        68 sa~em---~~~~~~~~------~~~Di~I~aAAVsD   94 (185)
T PF04127_consen   68 SAEEM---LEAVKELL------PSADIIIMAAAVSD   94 (185)
T ss_dssp             SHHHH---HHHHHHHG------GGGSEEEE-SB--S
T ss_pred             chhhh---hhhhcccc------CcceeEEEecchhh
Confidence            54444   44444433      23599999999863

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.48  E-value=0.0016  Score=60.29  Aligned_cols=115  Identities=16%  Similarity=0.232  Sum_probs=75.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHCC--CEEEEEecCchhHHHHHHHHHhhcC--CCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           61 VCIVTGATSGLGAAAAYALSREG--FHVVLVGRSSHLLSETMADITSRNK--DARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G--~~Vil~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      .|.|.|+ |++|..+|..|+.+|  .+|++++|++++++....++.....  ........   .+.+.       +    
T Consensus         2 kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~---~~~~~-------l----   66 (306)
T cd05291           2 KVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKA---GDYSD-------C----   66 (306)
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEc---CCHHH-------h----
Confidence            5788896 899999999999999  4899999999998888888765421  11222221   22211       1    


Q ss_pred             hccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017812          137 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  204 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~  204 (365)
                            ...|++|+.+|..... ..+.   .+.++.|.    -+.+.+.+.+.+....+.|+++|-..
T Consensus        67 ------~~aDIVIitag~~~~~-g~~R---~dll~~N~----~i~~~~~~~i~~~~~~~~vivvsNP~  120 (306)
T cd05291          67 ------KDADIVVITAGAPQKP-GETR---LDLLEKNA----KIMKSIVPKIKASGFDGIFLVASNPV  120 (306)
T ss_pred             ------CCCCEEEEccCCCCCC-CCCH---HHHHHHHH----HHHHHHHHHHHHhCCCeEEEEecChH
Confidence                  3489999999985332 2222   23344444    45555566666555467888888644

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=97.44  E-value=0.0026  Score=59.45  Aligned_cols=103  Identities=20%  Similarity=0.278  Sum_probs=65.8

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhc
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  138 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~  138 (365)
                      |++|||+||+||+|...+.-....|++++++..+.++.+ ..+++     +..   +..|..+.+    +.+++++..  
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~l-----GAd---~vi~y~~~~----~~~~v~~~t--  207 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLKEL-----GAD---HVINYREED----FVEQVRELT--  207 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHhc-----CCC---EEEcCCccc----HHHHHHHHc--
Confidence            899999999999999999888889977777777666554 33333     222   122233333    444444422  


Q ss_pred             cCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017812          139 SDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  205 (365)
Q Consensus       139 ~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~  205 (365)
                        ...++|+++...|..                        .....+..+..   +|+++.++..++
T Consensus       208 --~g~gvDvv~D~vG~~------------------------~~~~~l~~l~~---~G~lv~ig~~~g  245 (326)
T COG0604         208 --GGKGVDVVLDTVGGD------------------------TFAASLAALAP---GGRLVSIGALSG  245 (326)
T ss_pred             --CCCCceEEEECCCHH------------------------HHHHHHHHhcc---CCEEEEEecCCC
Confidence              113699999998851                        11113333433   589999998874

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.37  E-value=0.0014  Score=56.84  Aligned_cols=83  Identities=18%  Similarity=0.357  Sum_probs=63.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecC-------------------chhHHHHHHHHHhhcCCCceEEE
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRS-------------------SHLLSETMADITSRNKDARLEAF  115 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~  115 (365)
                      .+++++|+|.|+ ||+|.++|+.|++.|. ++++++++                   ..+.+.+.+.+.+.+|..++..+
T Consensus        18 kl~~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~   96 (202)
T TIGR02356        18 RLLNSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTAL   96 (202)
T ss_pred             HhcCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEe
Confidence            467889999985 7899999999999997 89999987                   45677788888888888777777


Q ss_pred             EecCCChhhHHHHHHHHHHHHhccCCCCCeeEEEecCC
Q 017812          116 QVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAG  153 (365)
Q Consensus       116 ~~Dls~~~~v~~~~~~~~~~~~~~~~~~~id~lv~nAG  153 (365)
                      ..++.+ +++.+++             ...|++|.+..
T Consensus        97 ~~~i~~-~~~~~~~-------------~~~D~Vi~~~d  120 (202)
T TIGR02356        97 KERVTA-ENLELLI-------------NNVDLVLDCTD  120 (202)
T ss_pred             hhcCCH-HHHHHHH-------------hCCCEEEECCC
Confidence            766654 2332221             34888887764

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.35  E-value=0.00029  Score=68.85  Aligned_cols=78  Identities=17%  Similarity=0.199  Sum_probs=53.3

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      ++||+++|||+++ +|.++|+.|+++|++|++.+++........+++...  +  +.+...+  +..++       .+  
T Consensus         3 ~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~--g--~~~~~~~--~~~~~-------~~--   66 (447)
T PRK02472          3 YQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEE--G--IKVICGS--HPLEL-------LD--   66 (447)
T ss_pred             cCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhc--C--CEEEeCC--CCHHH-------hc--
Confidence            5789999999976 999999999999999999998765444444445433  2  2222211  11111       11  


Q ss_pred             hccCCCCCeeEEEecCCccc
Q 017812          137 LDSDMHSSIQLLINNAGILA  156 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~  156 (365)
                            ..+|++|+++|+..
T Consensus        67 ------~~~d~vV~s~gi~~   80 (447)
T PRK02472         67 ------EDFDLMVKNPGIPY   80 (447)
T ss_pred             ------CcCCEEEECCCCCC
Confidence                  23899999999864

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=97.34  E-value=0.0045  Score=57.50  Aligned_cols=118  Identities=14%  Similarity=0.211  Sum_probs=78.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhhcCC-CceEEEEecCCChhhHHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRNKD-ARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~--~Vil~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      +++.|.|+|+ |++|..+|..|+.+|.  .+++.++++++++....++....+- .++... .  .+.+.          
T Consensus         5 ~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~-~--~~~~~----------   70 (315)
T PRK00066          5 QHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIY-A--GDYSD----------   70 (315)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEE-e--CCHHH----------
Confidence            4678999998 9999999999999996  8999999999988888888765321 122222 1  12111          


Q ss_pred             HHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017812          135 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  204 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~  204 (365)
                             ...-|++|..||.... +..+.   .+.++.|.    .+.+.+.+.+.+....+.++++|-..
T Consensus        71 -------~~~adivIitag~~~k-~g~~R---~dll~~N~----~i~~~i~~~i~~~~~~~~vivvsNP~  125 (315)
T PRK00066         71 -------CKDADLVVITAGAPQK-PGETR---LDLVEKNL----KIFKSIVGEVMASGFDGIFLVASNPV  125 (315)
T ss_pred             -------hCCCCEEEEecCCCCC-CCCCH---HHHHHHHH----HHHHHHHHHHHHhCCCeEEEEccCcH
Confidence                   1348999999998532 22333   23445554    34455555555544467888888544

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=97.33  E-value=0.00044  Score=68.77  Aligned_cols=47  Identities=28%  Similarity=0.427  Sum_probs=42.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADI  103 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l  103 (365)
                      ++++|+++|+|+ ||+|++++..|+++|++|++++|+.++++++.+++
T Consensus       376 ~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l  422 (529)
T PLN02520        376 PLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAV  422 (529)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence            467899999999 69999999999999999999999988887776655

>cd00704 MDH Malate dehydrogenase

Probab=97.32  E-value=0.002  Score=59.92  Aligned_cols=112  Identities=12%  Similarity=0.162  Sum_probs=69.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHCCC-------EEEEEecCc--hhHHHHHHHHHhhcCCCceEEEEecCCChh--hHH--H
Q 017812           61 VCIVTGATSGLGAAAAYALSREGF-------HVVLVGRSS--HLLSETMADITSRNKDARLEAFQVDLSSFQ--SVL--K  127 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G~-------~Vil~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~--~v~--~  127 (365)
                      .|.||||+|.+|..++..|+..|.       .+++.++++  +.+                .....|++|..  ...  .
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~----------------~g~~~Dl~d~~~~~~~~~~   65 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKAL----------------EGVVMELQDCAFPLLKGVV   65 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCcc----------------ceeeeehhhhcccccCCcE
Confidence            489999999999999999998773       499999986  432                33444555431  000  0


Q ss_pred             HHHHHHHHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcC-CCCCeEEEEcC
Q 017812          128 FKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNS-PVPSRIVNVTS  202 (365)
Q Consensus       128 ~~~~~~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~-~~~g~iV~vsS  202 (365)
                      +.....+      .....|++|+.||..... ..+.   .+.+..|.    .+.+.+.+.+.+. +..+.++++|-
T Consensus        66 i~~~~~~------~~~~aDiVVitAG~~~~~-g~tR---~dll~~N~----~i~~~i~~~i~~~~~~~~iiivvsN  127 (323)
T cd00704          66 ITTDPEE------AFKDVDVAILVGAFPRKP-GMER---ADLLRKNA----KIFKEQGEALNKVAKPTVKVLVVGN  127 (323)
T ss_pred             EecChHH------HhCCCCEEEEeCCCCCCc-CCcH---HHHHHHhH----HHHHHHHHHHHHhCCCCeEEEEeCC
Confidence            0001111      234599999999985332 2232   23444444    5667777777666 24678888764

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.32  E-value=0.00058  Score=62.31  Aligned_cols=48  Identities=21%  Similarity=0.248  Sum_probs=43.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCC-CEEEEEecCchhHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREG-FHVVLVGRSSHLLSETMADIT  104 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G-~~Vil~~r~~~~~~~~~~~l~  104 (365)
                      ++++++++|+|+ ||+|++++..|+..| .+|++++|+.++++++.+++.
T Consensus       120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~  168 (278)
T PRK00258        120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFG  168 (278)
T ss_pred             CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhh
Confidence            367899999997 899999999999999 699999999998888877764

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.28  E-value=0.0015  Score=59.65  Aligned_cols=51  Identities=22%  Similarity=0.244  Sum_probs=45.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhc
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRN  107 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~  107 (365)
                      +++++.|+|.|+ ||.|++++..|++.|+ +|++++|+.++.+++.+++....
T Consensus       124 ~~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~  175 (284)
T PRK12549        124 DASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARF  175 (284)
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhC
Confidence            356889999998 7799999999999998 89999999999999988886654

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=97.26  E-value=0.002  Score=59.96  Aligned_cols=115  Identities=16%  Similarity=0.116  Sum_probs=72.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHCCC-------EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHH--HH--
Q 017812           61 VCIVTGATSGLGAAAAYALSREGF-------HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLK--FK--  129 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G~-------~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~--~~--  129 (365)
                      .|.|+||+|.+|..+|..|+..|.       .++++++++..              .......+|++|......  ..  
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~--------------~~a~g~~~Dl~d~~~~~~~~~~~~   66 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAM--------------KVLEGVVMELMDCAFPLLDGVVPT   66 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcc--------------cccceeEeehhcccchhcCceecc
Confidence            378999999999999999998764       49999997542              123445666666541110  00  


Q ss_pred             HHHHHHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcC-CCCCeEEEEcCC
Q 017812          130 DSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNS-PVPSRIVNVTSF  203 (365)
Q Consensus       130 ~~~~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~-~~~g~iV~vsS~  203 (365)
                      ....+      .....|++|+.||..... .   +...+.+..|+    .+.+.+.+.+.+. +..+.|+++|..
T Consensus        67 ~~~~~------~~~~aDiVVitAG~~~~~-~---~tr~~ll~~N~----~i~k~i~~~i~~~~~~~~iiivvsNP  127 (324)
T TIGR01758        67 HDPAV------AFTDVDVAILVGAFPRKE-G---MERRDLLSKNV----KIFKEQGRALDKLAKKDCKVLVVGNP  127 (324)
T ss_pred             CChHH------HhCCCCEEEEcCCCCCCC-C---CcHHHHHHHHH----HHHHHHHHHHHhhCCCCeEEEEeCCc
Confidence            01011      235699999999985331 1   22345555555    5566666666665 235788887753

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=97.24  E-value=0.0061  Score=70.59  Aligned_cols=186  Identities=11%  Similarity=0.092  Sum_probs=111.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      .+.++.++|++.+++++.+++.+|.++|+.|+++..... .   .+.....  +..+..+.+.--|..++...++.+.. 
T Consensus      1752 ~~~~~~~~v~~d~~~~~~~L~~~L~~~G~~v~~~~~~~~-~---~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~- 1824 (2582)
T TIGR02813      1752 KQSGANALVIDDDGHNAGVLAEKLIAAGWQVAVVRSPWV-V---SHSASPL--ASAIASVTLGTIDDTSIEAVIKDIEE- 1824 (2582)
T ss_pred             cccCceeEEEcCCcchHHHHHHHHHhCCCeEEEeecccc-c---ccccccc--ccccccccccccchHHHHHHHHhhhc-
Confidence            345788899888999999999999999999887742211 0   0000000  22333445555555677777777655 


Q ss_pred             HhccCCCCCeeEEEecCCcccCCC-CCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017812          136 LLDSDMHSSIQLLINNAGILATSS-RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  214 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~~~~-~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~  214 (365)
                           ..+.++.+||..+...... ..+.......-...+...|.+.|.+.+.+...+ .+.++.|+...|..++...-.
T Consensus      1825 -----~~~~~~g~i~l~~~~~~~~~~~~~~~~~~~~~~~l~~~f~~ak~~~~~l~~~~-~~~~~~vsr~~G~~g~~~~~~ 1898 (2582)
T TIGR02813      1825 -----KTAQIDGFIHLQPQHKSVADKVDAIELPEAAKQSLMLAFLFAKLLNVKLATNA-RASFVTVSRIDGGFGYSNGDA 1898 (2582)
T ss_pred             -----cccccceEEEeccccccccccccccccchhhHHHHHHHHHHHHhhchhhccCC-CeEEEEEEecCCccccCCccc
Confidence                 5678999999887643211 111111112222444556888888777765543 578999998876522211000


Q ss_pred             CccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCC
Q 017812          215 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG  269 (365)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG  269 (365)
                      ..           +... .--....+++.+|+|++++|+.   .-.++...+.|.
T Consensus      1899 ~~-----------~~~~-~~~~~~~a~l~Gl~Ktl~~E~P---~~~~r~vDl~~~ 1938 (2582)
T TIGR02813      1899 DS-----------GTQQ-VKAELNQAALAGLTKTLNHEWN---AVFCRALDLAPK 1938 (2582)
T ss_pred             cc-----------cccc-cccchhhhhHHHHHHhHHHHCC---CCeEEEEeCCCC
Confidence            00           0000 0012357899999999999986   566777777775

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.24  E-value=0.0039  Score=59.24  Aligned_cols=77  Identities=18%  Similarity=0.185  Sum_probs=54.4

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      +.++.|+|.|+ |.+|+..++.+...|++|++++|+.++++++.+..     +..   +..+..+.+++.+.   +    
T Consensus       165 l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~-----g~~---v~~~~~~~~~l~~~---l----  228 (370)
T TIGR00518       165 VEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEF-----GGR---IHTRYSNAYEIEDA---V----  228 (370)
T ss_pred             CCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhc-----Cce---eEeccCCHHHHHHH---H----
Confidence            56677999988 78999999999999999999999988766554433     211   22344444443332   2    


Q ss_pred             hccCCCCCeeEEEecCCcc
Q 017812          137 LDSDMHSSIQLLINNAGIL  155 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~  155 (365)
                            ...|++|+++++.
T Consensus       229 ------~~aDvVI~a~~~~  241 (370)
T TIGR00518       229 ------KRADLLIGAVLIP  241 (370)
T ss_pred             ------ccCCEEEEccccC
Confidence                  2379999998764

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=97.23  E-value=0.0024  Score=59.90  Aligned_cols=83  Identities=24%  Similarity=0.408  Sum_probs=63.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCc---------------------hhHHHHHHHHHhhcCCCceE
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSS---------------------HLLSETMADITSRNKDARLE  113 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~---------------------~~~~~~~~~l~~~~~~~~~~  113 (365)
                      .++..+|+|.|+ ||+|..+|..|++.|. +|.+++++.                     .+.+.+.+.+++.++..++.
T Consensus        21 ~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~   99 (339)
T PRK07688         21 KLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVE   99 (339)
T ss_pred             HhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEE
Confidence            467889999999 7999999999999998 999999863                     45666677787777778888


Q ss_pred             EEEecCCChhhHHHHHHHHHHHHhccCCCCCeeEEEecCC
Q 017812          114 AFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAG  153 (365)
Q Consensus       114 ~~~~Dls~~~~v~~~~~~~~~~~~~~~~~~~id~lv~nAG  153 (365)
                      .+..|++. +++.+++             ...|++|.+..
T Consensus       100 ~~~~~~~~-~~~~~~~-------------~~~DlVid~~D  125 (339)
T PRK07688        100 AIVQDVTA-EELEELV-------------TGVDLIIDATD  125 (339)
T ss_pred             EEeccCCH-HHHHHHH-------------cCCCEEEEcCC
Confidence            88888764 3333322             23788887743

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=97.23  E-value=0.0051  Score=57.20  Aligned_cols=43  Identities=16%  Similarity=0.193  Sum_probs=37.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETM  100 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~  100 (365)
                      .|.+++|+||+|++|..++......|++|+.+++++++.+.+.
T Consensus       143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~  185 (329)
T cd08294         143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLK  185 (329)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence            4789999999999999998888889999999999887765543

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=97.23  E-value=0.00049  Score=59.55  Aligned_cols=46  Identities=15%  Similarity=0.197  Sum_probs=40.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMAD  102 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~  102 (365)
                      +++||+++|+|.+ .+|+.+|+.|.+.|++|++.+++.+++++..++
T Consensus        25 ~l~gk~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~   70 (200)
T cd01075          25 SLEGKTVAVQGLG-KVGYKLAEHLLEEGAKLIVADINEEAVARAAEL   70 (200)
T ss_pred             CCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence            5789999999995 899999999999999999999998877666554

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=97.22  E-value=0.0059  Score=56.72  Aligned_cols=42  Identities=33%  Similarity=0.353  Sum_probs=37.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSET   99 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~   99 (365)
                      .+.+++|+||++++|.++++.+...|++|+.++++.++.+.+
T Consensus       162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~  203 (332)
T cd08259         162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKIL  203 (332)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH
Confidence            368999999999999999999999999999999987765443

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=97.22  E-value=0.0021  Score=59.10  Aligned_cols=80  Identities=16%  Similarity=0.219  Sum_probs=55.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .+++++|+|++++||.+++..+...|++|++++++.++.+.+ +++     +..   ..+|..+.+....+.    +.. 
T Consensus       139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~-----g~~---~~~~~~~~~~~~~~~----~~~-  204 (323)
T cd05276         139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC-RAL-----GAD---VAINYRTEDFAEEVK----EAT-  204 (323)
T ss_pred             CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHc-----CCC---EEEeCCchhHHHHHH----HHh-
Confidence            478999999999999999999999999999999988766554 222     221   223433333222222    211 


Q ss_pred             ccCCCCCeeEEEecCCc
Q 017812          138 DSDMHSSIQLLINNAGI  154 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~  154 (365)
                         ..+++|++++++|.
T Consensus       205 ---~~~~~d~vi~~~g~  218 (323)
T cd05276         205 ---GGRGVDVILDMVGG  218 (323)
T ss_pred             ---CCCCeEEEEECCch
Confidence               22569999999984

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=97.20  E-value=0.0036  Score=55.93  Aligned_cols=83  Identities=20%  Similarity=0.326  Sum_probs=62.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCc-------------------hhHHHHHHHHHhhcCCCceEEE
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSS-------------------HLLSETMADITSRNKDARLEAF  115 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~  115 (365)
                      .+++++|+|.|+ ||+|.++++.|+..|. ++++++.+.                   .+.+.+.+.+.+.+|..++..+
T Consensus        29 ~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~  107 (245)
T PRK05690         29 KLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETI  107 (245)
T ss_pred             HhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEE
Confidence            367889999999 9999999999999997 898887642                   3566677788888888888888


Q ss_pred             EecCCChhhHHHHHHHHHHHHhccCCCCCeeEEEecCC
Q 017812          116 QVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAG  153 (365)
Q Consensus       116 ~~Dls~~~~v~~~~~~~~~~~~~~~~~~~id~lv~nAG  153 (365)
                      ...++. +.+.+++             ...|++|.+..
T Consensus       108 ~~~i~~-~~~~~~~-------------~~~DiVi~~~D  131 (245)
T PRK05690        108 NARLDD-DELAALI-------------AGHDLVLDCTD  131 (245)
T ss_pred             eccCCH-HHHHHHH-------------hcCCEEEecCC
Confidence            776653 2222222             24889887764

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=97.20  E-value=0.0064  Score=54.51  Aligned_cols=104  Identities=21%  Similarity=0.205  Sum_probs=68.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .+++++|+|+++ +|.++++.+...|.+|+++++++++.+.+ +++     +..   ...|..+.+....+.   ..   
T Consensus       134 ~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~-----g~~---~~~~~~~~~~~~~~~---~~---  197 (271)
T cd05188         134 PGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELA-KEL-----GAD---HVIDYKEEDLEEELR---LT---  197 (271)
T ss_pred             CCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HHh-----CCc---eeccCCcCCHHHHHH---Hh---
Confidence            478999999998 99999999999999999999987665443 222     111   123444433333332   11   


Q ss_pred             ccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccc
Q 017812          138 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHR  206 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~  206 (365)
                         ..+++|++++++|..                       ...+..+..+..   .|+++.++.....
T Consensus       198 ---~~~~~d~vi~~~~~~-----------------------~~~~~~~~~l~~---~G~~v~~~~~~~~  237 (271)
T cd05188         198 ---GGGGADVVIDAVGGP-----------------------ETLAQALRLLRP---GGRIVVVGGTSGG  237 (271)
T ss_pred             ---cCCCCCEEEECCCCH-----------------------HHHHHHHHhccc---CCEEEEEccCCCC
Confidence               346799999998852                       123334444443   5899999886543

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=97.19  E-value=0.0025  Score=60.85  Aligned_cols=82  Identities=22%  Similarity=0.383  Sum_probs=62.6

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecC-------------------chhHHHHHHHHHhhcCCCceEEEE
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRS-------------------SHLLSETMADITSRNKDARLEAFQ  116 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~  116 (365)
                      +++++|+|.|+ ||+|.+++..|++.|. ++++++++                   ..+.+.+.+.+.+.++..++..+.
T Consensus       133 l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~  211 (376)
T PRK08762        133 LLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQ  211 (376)
T ss_pred             HhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEe
Confidence            67788888866 7899999999999998 89999997                   567888888888888777777776


Q ss_pred             ecCCChhhHHHHHHHHHHHHhccCCCCCeeEEEecCC
Q 017812          117 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAG  153 (365)
Q Consensus       117 ~Dls~~~~v~~~~~~~~~~~~~~~~~~~id~lv~nAG  153 (365)
                      ..+++ +.+..++             ...|++|++..
T Consensus       212 ~~~~~-~~~~~~~-------------~~~D~Vv~~~d  234 (376)
T PRK08762        212 ERVTS-DNVEALL-------------QDVDVVVDGAD  234 (376)
T ss_pred             ccCCh-HHHHHHH-------------hCCCEEEECCC
Confidence            55553 2232222             24799998775

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=97.18  E-value=0.0019  Score=58.92  Aligned_cols=50  Identities=24%  Similarity=0.308  Sum_probs=43.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhc
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRN  107 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~  107 (365)
                      .++|+++|-|| ||-|++++..|++.|+ +|+++.|+.++.+++.+.+....
T Consensus       125 ~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~  175 (283)
T PRK14027        125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAV  175 (283)
T ss_pred             cCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc
Confidence            56889999998 8899999999999997 89999999999998888775443

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=97.16  E-value=0.0045  Score=49.88  Aligned_cols=80  Identities=19%  Similarity=0.368  Sum_probs=61.6

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecC-------------------chhHHHHHHHHHhhcCCCceEEEEec
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRS-------------------SHLLSETMADITSRNKDARLEAFQVD  118 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~~D  118 (365)
                      .++|+|-|+ ||+|.++|+.|++.|. ++++++.+                   ..+.+.+.+.+.+.+|..++..+..+
T Consensus         2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~   80 (135)
T PF00899_consen    2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK   80 (135)
T ss_dssp             T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence            467888887 6799999999999998 89998873                   24678888889999999999999988


Q ss_pred             CCChhhHHHHHHHHHHHHhccCCCCCeeEEEecCC
Q 017812          119 LSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAG  153 (365)
Q Consensus       119 ls~~~~v~~~~~~~~~~~~~~~~~~~id~lv~nAG  153 (365)
                      +++ +...++++             ..|++|.+..
T Consensus        81 ~~~-~~~~~~~~-------------~~d~vi~~~d  101 (135)
T PF00899_consen   81 IDE-ENIEELLK-------------DYDIVIDCVD  101 (135)
T ss_dssp             CSH-HHHHHHHH-------------TSSEEEEESS
T ss_pred             ccc-cccccccc-------------CCCEEEEecC
Confidence            833 33444431             3789988754

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=97.14  E-value=0.0035  Score=54.68  Aligned_cols=81  Identities=20%  Similarity=0.289  Sum_probs=61.4

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCc------------------hhHHHHHHHHHhhcCCCceEEEEe
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSS------------------HLLSETMADITSRNKDARLEAFQV  117 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~------------------~~~~~~~~~l~~~~~~~~~~~~~~  117 (365)
                      +++.+|+|.|+ ||+|.++|+.|++.|. ++++++.+.                  .+.+.+.+.+.+.++..++..+..
T Consensus        26 L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~~  104 (212)
T PRK08644         26 LKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHNE  104 (212)
T ss_pred             HhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEee
Confidence            66788999996 7899999999999998 799999872                  466777777888888878877777


Q ss_pred             cCCChhhHHHHHHHHHHHHhccCCCCCeeEEEecC
Q 017812          118 DLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNA  152 (365)
Q Consensus       118 Dls~~~~v~~~~~~~~~~~~~~~~~~~id~lv~nA  152 (365)
                      .+++. .+.+++             ...|++|.+.
T Consensus       105 ~i~~~-~~~~~~-------------~~~DvVI~a~  125 (212)
T PRK08644        105 KIDED-NIEELF-------------KDCDIVVEAF  125 (212)
T ss_pred             ecCHH-HHHHHH-------------cCCCEEEECC
Confidence            77652 222222             3478888764

>PRK05086 malate dehydrogenase; Provisional

Probab=97.13  E-value=0.016  Score=53.71  Aligned_cols=114  Identities=13%  Similarity=0.135  Sum_probs=61.6

Q ss_pred             EEEEecCCChHHHHHHHHHHH-CC--CEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           61 VCIVTGATSGLGAAAAYALSR-EG--FHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~-~G--~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .++|.||+|+||.+++..|.. .+  ..+++.+|++.. +...-++...  +.......++-   +++.+          
T Consensus         2 KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~-~g~alDl~~~--~~~~~i~~~~~---~d~~~----------   65 (312)
T PRK05086          2 KVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVT-PGVAVDLSHI--PTAVKIKGFSG---EDPTP----------   65 (312)
T ss_pred             EEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCC-cceehhhhcC--CCCceEEEeCC---CCHHH----------
Confidence            589999999999999999865 33  478888987532 1111122211  11111111111   12111          


Q ss_pred             ccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcC
Q 017812          138 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS  202 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS  202 (365)
                         .....|++|.++|..... ..+   -.+.+..|.-..-.+    .+.|.+.. ..++|.+.|
T Consensus        66 ---~l~~~DiVIitaG~~~~~-~~~---R~dll~~N~~i~~~i----i~~i~~~~-~~~ivivvs  118 (312)
T PRK05086         66 ---ALEGADVVLISAGVARKP-GMD---RSDLFNVNAGIVKNL----VEKVAKTC-PKACIGIIT  118 (312)
T ss_pred             ---HcCCCCEEEEcCCCCCCC-CCC---HHHHHHHHHHHHHHH----HHHHHHhC-CCeEEEEcc
Confidence               113499999999985332 222   234566666554444    44444443 335555554

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=97.10  E-value=0.0071  Score=56.25  Aligned_cols=104  Identities=16%  Similarity=0.224  Sum_probs=67.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .+.+++|+|+++++|.+++..+.+.|++|+.++++.++.+.+.+.+     +.. .+  .|..+.+    +.+.+.+.  
T Consensus       145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~-----g~~-~~--~~~~~~~----~~~~v~~~--  210 (329)
T cd05288         145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEEL-----GFD-AA--INYKTPD----LAEALKEA--  210 (329)
T ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhc-----CCc-eE--EecCChh----HHHHHHHh--
Confidence            4789999999999999999999999999999999887665543322     221 11  2222322    22223321  


Q ss_pred             ccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017812          138 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  205 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~  205 (365)
                         ..+++|++++++|..                        ..+..++.+..   .|++|.+++..+
T Consensus       211 ---~~~~~d~vi~~~g~~------------------------~~~~~~~~l~~---~G~~v~~g~~~~  248 (329)
T cd05288         211 ---APDGIDVYFDNVGGE------------------------ILDAALTLLNK---GGRIALCGAISQ  248 (329)
T ss_pred             ---ccCCceEEEEcchHH------------------------HHHHHHHhcCC---CceEEEEeeccC
Confidence               124699999988731                        23334444433   589999986543

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.10  E-value=0.0011  Score=60.11  Aligned_cols=77  Identities=29%  Similarity=0.342  Sum_probs=62.9

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhcc
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  139 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~  139 (365)
                      ...+|-||+|.-|.-+|++|+++|.+-.+.+||..++..+.+++     +.+...+.+++  ++.+++.+          
T Consensus         7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~L-----G~~~~~~p~~~--p~~~~~~~----------   69 (382)
T COG3268           7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASL-----GPEAAVFPLGV--PAALEAMA----------   69 (382)
T ss_pred             eeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhc-----CccccccCCCC--HHHHHHHH----------
Confidence            56899999999999999999999999999999999999999888     55555666655  44444433          


Q ss_pred             CCCCCeeEEEecCCccc
Q 017812          140 DMHSSIQLLINNAGILA  156 (365)
Q Consensus       140 ~~~~~id~lv~nAG~~~  156 (365)
                         ...++|+|++|...
T Consensus        70 ---~~~~VVlncvGPyt   83 (382)
T COG3268          70 ---SRTQVVLNCVGPYT   83 (382)
T ss_pred             ---hcceEEEecccccc
Confidence               35889999999753

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=97.08  E-value=0.013  Score=57.58  Aligned_cols=116  Identities=17%  Similarity=0.191  Sum_probs=72.5

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhh-----H----HH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQS-----V----LK  127 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~-----v----~~  127 (365)
                      ..+.+|+|.|+ |.+|...+..+...|++|+++++++++++.+.+ +     +.+  ++..|..+.+.     .    ..
T Consensus       163 ~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aes-l-----GA~--~v~i~~~e~~~~~~gya~~~s~~  233 (509)
T PRK09424        163 VPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVES-M-----GAE--FLELDFEEEGGSGDGYAKVMSEE  233 (509)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c-----CCe--EEEeccccccccccchhhhcchh
Confidence            45889999998 669999999999999999999999988765543 3     333  33333322110     0    11


Q ss_pred             HHHHHHHHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCC
Q 017812          128 FKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSF  203 (365)
Q Consensus       128 ~~~~~~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~  203 (365)
                      +.+...+.+.+  ..+..|++|.++|+.+...                 +..+++..+..|+.   .|+||.++..
T Consensus       234 ~~~~~~~~~~~--~~~gaDVVIetag~pg~~a-----------------P~lit~~~v~~mkp---GgvIVdvg~~  287 (509)
T PRK09424        234 FIKAEMALFAE--QAKEVDIIITTALIPGKPA-----------------PKLITAEMVASMKP---GSVIVDLAAE  287 (509)
T ss_pred             HHHHHHHHHHh--ccCCCCEEEECCCCCcccC-----------------cchHHHHHHHhcCC---CCEEEEEccC
Confidence            11111111110  2246999999999854211                 11334556667764   5799999874

>PRK06849 hypothetical protein; Provisional

Probab=97.07  E-value=0.0037  Score=59.93  Aligned_cols=39  Identities=21%  Similarity=0.271  Sum_probs=35.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLL   96 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~   96 (365)
                      +.++|||||++.++|.++|+.|.+.|++|++++.++...
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~   41 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPL   41 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHH
Confidence            358999999999999999999999999999999987544

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=97.05  E-value=0.0021  Score=58.75  Aligned_cols=47  Identities=28%  Similarity=0.348  Sum_probs=41.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADIT  104 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~  104 (365)
                      ++++.++|-|+ ||.|++++..|++.|+ +|+++.|+.++++++.+++.
T Consensus       123 ~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~  170 (282)
T TIGR01809       123 LAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGV  170 (282)
T ss_pred             cCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhh
Confidence            56889999987 8999999999999997 89999999999888877763

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=97.04  E-value=0.0039  Score=55.00  Aligned_cols=74  Identities=24%  Similarity=0.318  Sum_probs=59.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhccC
Q 017812           61 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  140 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~~  140 (365)
                      .++|-|++. +|..+|+.|.++|++|+++++++++.++..++      ....+.+.+|-++++-++++            
T Consensus         2 ~iiIiG~G~-vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~------~~~~~~v~gd~t~~~~L~~a------------   62 (225)
T COG0569           2 KIIIIGAGR-VGRSVARELSEEGHNVVLIDRDEERVEEFLAD------ELDTHVVIGDATDEDVLEEA------------   62 (225)
T ss_pred             EEEEECCcH-HHHHHHHHHHhCCCceEEEEcCHHHHHHHhhh------hcceEEEEecCCCHHHHHhc------------
Confidence            577777755 99999999999999999999999987775543      23678999999998877664            


Q ss_pred             CCCCeeEEEecCC
Q 017812          141 MHSSIQLLINNAG  153 (365)
Q Consensus       141 ~~~~id~lv~nAG  153 (365)
                      .-...|++|...|
T Consensus        63 gi~~aD~vva~t~   75 (225)
T COG0569          63 GIDDADAVVAATG   75 (225)
T ss_pred             CCCcCCEEEEeeC
Confidence            3356888887766

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=97.04  E-value=0.0047  Score=58.38  Aligned_cols=65  Identities=20%  Similarity=0.297  Sum_probs=55.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCc-------------------hhHHHHHHHHHhhcCCCceEEE
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSS-------------------HLLSETMADITSRNKDARLEAF  115 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~  115 (365)
                      .+++.+|+|.|+ ||+|.++++.|+..|. ++++++.+.                   .+.+.+.+.+++.+|..++..+
T Consensus        25 ~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~  103 (355)
T PRK05597         25 SLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVS  103 (355)
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEE
Confidence            367889999998 7899999999999997 899998863                   5778888899999888888888


Q ss_pred             EecCCC
Q 017812          116 QVDLSS  121 (365)
Q Consensus       116 ~~Dls~  121 (365)
                      ..+++.
T Consensus       104 ~~~i~~  109 (355)
T PRK05597        104 VRRLTW  109 (355)
T ss_pred             EeecCH
Confidence            777764

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=97.04  E-value=0.0053  Score=54.26  Aligned_cols=84  Identities=23%  Similarity=0.353  Sum_probs=62.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecC-------------------chhHHHHHHHHHhhcCCCceEEE
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRS-------------------SHLLSETMADITSRNKDARLEAF  115 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~  115 (365)
                      .+++++|+|.|+ ||+|.++|+.|++.|. ++++++.+                   ..+.+.+.+.+++.+|..++..+
T Consensus        18 ~L~~~~VlivG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~   96 (228)
T cd00757          18 KLKNARVLVVGA-GGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAY   96 (228)
T ss_pred             HHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEe
Confidence            367789999995 7899999999999998 88888553                   34677788888888888888888


Q ss_pred             EecCCChhhHHHHHHHHHHHHhccCCCCCeeEEEecCCc
Q 017812          116 QVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI  154 (365)
Q Consensus       116 ~~Dls~~~~v~~~~~~~~~~~~~~~~~~~id~lv~nAG~  154 (365)
                      ..+++. +++.+++             ...|++|.+..-
T Consensus        97 ~~~i~~-~~~~~~~-------------~~~DvVi~~~d~  121 (228)
T cd00757          97 NERLDA-ENAEELI-------------AGYDLVLDCTDN  121 (228)
T ss_pred             cceeCH-HHHHHHH-------------hCCCEEEEcCCC
Confidence            777743 3333222             248999987763

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>PRK14968 putative methyltransferase; Provisional

Probab=97.02  E-value=0.019  Score=48.78  Aligned_cols=122  Identities=19%  Similarity=0.155  Sum_probs=73.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCc-eEEEEecCCChhhHHHHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDAR-LEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~-~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      +++.+|-.|++.|.   ++..+++++.+|+.++++++..+.+.+.+.......+ +.++.+|+.+.         +.   
T Consensus        23 ~~~~vLd~G~G~G~---~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~---------~~---   87 (188)
T PRK14968         23 KGDRVLEVGTGSGI---VAIVAAKNGKKVVGVDINPYAVECAKCNAKLNNIRNNGVEVIRSDLFEP---------FR---   87 (188)
T ss_pred             CCCEEEEEccccCH---HHHHHHhhcceEEEEECCHHHHHHHHHHHHHcCCCCcceEEEecccccc---------cc---
Confidence            46789999988776   5666666789999999999888888777765432222 77888887542         11   


Q ss_pred             hccCCCCCeeEEEecCCcccCCCCC-CHHHHhHhHHHHhHHH---HHHHHHHhHhhhcCCCCCeEEEEcC
Q 017812          137 LDSDMHSSIQLLINNAGILATSSRL-TPEGYDQMMSTNYIGA---FFLTKLLLPLLKNSPVPSRIVNVTS  202 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~~~~~~-~~~~~~~~~~vN~~~~---~~l~~~~l~~~~~~~~~g~iV~vsS  202 (365)
                           ...+|+++.|.......... ..+.+...+..+..+.   -.+.+.+.+.|+.   .|.++++.+
T Consensus        88 -----~~~~d~vi~n~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~Lk~---gG~~~~~~~  149 (188)
T PRK14968         88 -----GDKFDVILFNPPYLPTEEEEEWDDWLNYALSGGKDGREVIDRFLDEVGRYLKP---GGRILLLQS  149 (188)
T ss_pred             -----ccCceEEEECCCcCCCCchhhhhhhhhhhhccCcChHHHHHHHHHHHHHhcCC---CeEEEEEEc
Confidence                 13699999998764321111 1112222222222222   2355666667654   467666544

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=97.00  E-value=0.0031  Score=57.29  Aligned_cols=51  Identities=22%  Similarity=0.324  Sum_probs=45.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhc
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRN  107 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~  107 (365)
                      +.+|+.++|.|| ||-+++++..|++.|+ +|+++.|+.++++++.+.+.+.+
T Consensus       123 ~~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~  174 (283)
T COG0169         123 DVTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELG  174 (283)
T ss_pred             ccCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcc
Confidence            356899999997 6799999999999996 89999999999999988887653

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=96.99  E-value=0.011  Score=55.12  Aligned_cols=163  Identities=10%  Similarity=0.071  Sum_probs=100.2

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCC-------EEEEEecCch--hHHHHHHHHHhhc-CC-CceEEEEecCCChhhHHHH
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGF-------HVVLVGRSSH--LLSETMADITSRN-KD-ARLEAFQVDLSSFQSVLKF  128 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~-------~Vil~~r~~~--~~~~~~~~l~~~~-~~-~~~~~~~~Dls~~~~v~~~  128 (365)
                      +.|.|+||+|.+|..+|..|+.+|.       .+++.+.++.  +++....++.... +- .++.+   .-.+.+     
T Consensus         3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i---~~~~~~-----   74 (322)
T cd01338           3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVI---TDDPNV-----   74 (322)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEE---ecCcHH-----
Confidence            4699999999999999999999885       6999999543  3444444443321 10 11111   101111     


Q ss_pred             HHHHHHHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCC-CCCeEEEEcCCcccc
Q 017812          129 KDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP-VPSRIVNVTSFTHRN  207 (365)
Q Consensus       129 ~~~~~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~-~~g~iV~vsS~~~~~  207 (365)
                                  ....-|++|..||.... +..+.   .+.+..|+    -+.+.+.+.+.+.. ..+.++++|-..-..
T Consensus        75 ------------~~~daDivvitaG~~~k-~g~tR---~dll~~N~----~i~~~i~~~i~~~~~~~~iiivvsNPvD~~  134 (322)
T cd01338          75 ------------AFKDADWALLVGAKPRG-PGMER---ADLLKANG----KIFTAQGKALNDVASRDVKVLVVGNPCNTN  134 (322)
T ss_pred             ------------HhCCCCEEEEeCCCCCC-CCCcH---HHHHHHHH----HHHHHHHHHHHhhCCCCeEEEEecCcHHHH
Confidence                        12458999999998533 22332   22355554    56666677666655 267888887533110


Q ss_pred             cccccCCCccccccccccCC-CCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEE
Q 017812          208 VFNAQVNNETITGKFFLRSK-CYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSV  263 (365)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v  263 (365)
                      .+            ...... +.|....|+.++..-..|...+++.+... ...|+.
T Consensus       135 t~------------~~~k~sg~~p~~~ViG~t~LDs~Rl~~~la~~lgv~-~~~v~~  178 (322)
T cd01338         135 AL------------IAMKNAPDIPPDNFTAMTRLDHNRAKSQLAKKAGVP-VTDVKN  178 (322)
T ss_pred             HH------------HHHHHcCCCChHheEEehHHHHHHHHHHHHHHhCcC-hhHeEE
Confidence            00            000113 37788899999999999999999988631 344553

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=96.97  E-value=0.0062  Score=51.40  Aligned_cols=77  Identities=18%  Similarity=0.307  Sum_probs=56.3

Q ss_pred             EEEecCCChHHHHHHHHHHHCCC-EEEEEecCc------------------hhHHHHHHHHHhhcCCCceEEEEecCCCh
Q 017812           62 CIVTGATSGLGAAAAYALSREGF-HVVLVGRSS------------------HLLSETMADITSRNKDARLEAFQVDLSSF  122 (365)
Q Consensus        62 vlITGassGIG~~~a~~la~~G~-~Vil~~r~~------------------~~~~~~~~~l~~~~~~~~~~~~~~Dls~~  122 (365)
                      |+|.|+ ||+|.++++.|++.|. ++++++.+.                  .+.+.+.+.+.+.+|..++..+...++. 
T Consensus         2 VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~~-   79 (174)
T cd01487           2 VGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKIDE-   79 (174)
T ss_pred             EEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecCh-
Confidence            678886 8899999999999998 799999875                  4566667777777777777777766654 


Q ss_pred             hhHHHHHHHHHHHHhccCCCCCeeEEEecCC
Q 017812          123 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAG  153 (365)
Q Consensus       123 ~~v~~~~~~~~~~~~~~~~~~~id~lv~nAG  153 (365)
                      +.+.+++             ...|++|.+..
T Consensus        80 ~~~~~~l-------------~~~DlVi~~~d   97 (174)
T cd01487          80 NNLEGLF-------------GDCDIVVEAFD   97 (174)
T ss_pred             hhHHHHh-------------cCCCEEEECCC
Confidence            2222222             34788887643

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=96.93  E-value=0.0039  Score=60.01  Aligned_cols=47  Identities=13%  Similarity=0.170  Sum_probs=41.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADI  103 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l  103 (365)
                      ++.+++++|-|+ ||+|+.+++.|+.+|+ +|+++.|+.++++++.+++
T Consensus       178 ~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~  225 (414)
T PRK13940        178 NISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAF  225 (414)
T ss_pred             CccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHh
Confidence            467899999999 9999999999999996 8999999998887776654

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=96.86  E-value=0.018  Score=54.19  Aligned_cols=76  Identities=16%  Similarity=0.157  Sum_probs=51.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      .|++|+|+|+ |++|...+..+...|+ +|+++++++++++.+. ++     +...   ..|..+. ++.+    +.+  
T Consensus       169 ~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~-~l-----Ga~~---vi~~~~~-~~~~----~~~--  231 (343)
T PRK09880        169 QGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAR-EM-----GADK---LVNPQND-DLDH----YKA--  231 (343)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHH-Hc-----CCcE---EecCCcc-cHHH----Hhc--
Confidence            4789999986 8999999988888898 6889999988765433 23     3221   2343332 2222    222  


Q ss_pred             hccCCCCCeeEEEecCCc
Q 017812          137 LDSDMHSSIQLLINNAGI  154 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~  154 (365)
                          ..+.+|+++.++|.
T Consensus       232 ----~~g~~D~vid~~G~  245 (343)
T PRK09880        232 ----EKGYFDVSFEVSGH  245 (343)
T ss_pred             ----cCCCCCEEEECCCC
Confidence                22469999999984

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=96.84  E-value=0.02  Score=53.15  Aligned_cols=97  Identities=22%  Similarity=0.172  Sum_probs=64.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .|++|+|+|++ |+|...++.....|++|++++|++++++.+.+.      +.+.   ..|-+|.+....+    ++   
T Consensus       166 pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~l------GAd~---~i~~~~~~~~~~~----~~---  228 (339)
T COG1064         166 PGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAKKL------GADH---VINSSDSDALEAV----KE---  228 (339)
T ss_pred             CCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHh------CCcE---EEEcCCchhhHHh----Hh---
Confidence            38999999999 999777766666999999999999887654433      3322   2232344433332    21   


Q ss_pred             ccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017812          138 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  204 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~  204 (365)
                            ..|++|..++ ..                       .....++.++.   .|++|.++-..
T Consensus       229 ------~~d~ii~tv~-~~-----------------------~~~~~l~~l~~---~G~~v~vG~~~  262 (339)
T COG1064         229 ------IADAIIDTVG-PA-----------------------TLEPSLKALRR---GGTLVLVGLPG  262 (339)
T ss_pred             ------hCcEEEECCC-hh-----------------------hHHHHHHHHhc---CCEEEEECCCC
Confidence                  2889998888 21                       12234455544   58999998764

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=96.84  E-value=0.011  Score=47.99  Aligned_cols=77  Identities=18%  Similarity=0.312  Sum_probs=58.0

Q ss_pred             EEEecCCChHHHHHHHHHHHCCC-EEEEEecC-------------------chhHHHHHHHHHhhcCCCceEEEEecCCC
Q 017812           62 CIVTGATSGLGAAAAYALSREGF-HVVLVGRS-------------------SHLLSETMADITSRNKDARLEAFQVDLSS  121 (365)
Q Consensus        62 vlITGassGIG~~~a~~la~~G~-~Vil~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~~Dls~  121 (365)
                      |+|.|+ ||+|.++++.|++.|. ++.+++.+                   ..+.+.+.+.+++.+|..++..+..++.+
T Consensus         2 VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~~   80 (143)
T cd01483           2 VLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGISE   80 (143)
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecCh
Confidence            788887 8999999999999998 79998764                   24667777888888887888888777765


Q ss_pred             hhhHHHHHHHHHHHHhccCCCCCeeEEEecCC
Q 017812          122 FQSVLKFKDSLQQWLLDSDMHSSIQLLINNAG  153 (365)
Q Consensus       122 ~~~v~~~~~~~~~~~~~~~~~~~id~lv~nAG  153 (365)
                      ...        .+      ...+.|++|.+..
T Consensus        81 ~~~--------~~------~~~~~diVi~~~d   98 (143)
T cd01483          81 DNL--------DD------FLDGVDLVIDAID   98 (143)
T ss_pred             hhH--------HH------HhcCCCEEEECCC
Confidence            322        11      1245888887765

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=96.83  E-value=0.0071  Score=55.74  Aligned_cols=41  Identities=20%  Similarity=0.255  Sum_probs=36.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSE   98 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~   98 (365)
                      .|++++|+|+++++|.+++..+...|++|+++++++++.+.
T Consensus       139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~  179 (325)
T TIGR02824       139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAA  179 (325)
T ss_pred             CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence            47899999999999999999999999999999998876543

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=96.82  E-value=0.018  Score=53.33  Aligned_cols=118  Identities=19%  Similarity=0.233  Sum_probs=69.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHCCC--EEEEEecCc--hhHHHHHHHHHhhcC--CCceEEEEecCCChhhHHHHHHHHHH
Q 017812           61 VCIVTGATSGLGAAAAYALSREGF--HVVLVGRSS--HLLSETMADITSRNK--DARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G~--~Vil~~r~~--~~~~~~~~~l~~~~~--~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      .+.|+|++|.+|..++..|+..|.  .|++++|++  ++++....++.....  +...   .+..++  +..    .+  
T Consensus         2 kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~---~i~~~~--d~~----~l--   70 (309)
T cd05294           2 KVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDA---EIKISS--DLS----DV--   70 (309)
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCc---EEEECC--CHH----Hh--
Confidence            589999999999999999999996  599999965  555555544433210  1111   111111  111    11  


Q ss_pred             HHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017812          135 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  205 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~  205 (365)
                              ...|++|..+|.... ...+.   .+.++.|.--    ++.+.+.+.+....+.||++++..-
T Consensus        71 --------~~aDiViitag~p~~-~~~~r---~dl~~~n~~i----~~~~~~~i~~~~~~~~viv~~npvd  125 (309)
T cd05294          71 --------AGSDIVIITAGVPRK-EGMSR---LDLAKKNAKI----VKKYAKQIAEFAPDTKILVVTNPVD  125 (309)
T ss_pred             --------CCCCEEEEecCCCCC-CCCCH---HHHHHHHHHH----HHHHHHHHHHHCCCeEEEEeCCchH
Confidence                    358999999998532 22222   2334445443    4444444444333578888887553

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=96.81  E-value=0.0081  Score=55.40  Aligned_cols=78  Identities=18%  Similarity=0.325  Sum_probs=57.4

Q ss_pred             EEEecCCChHHHHHHHHHHHCCC-EEEEEecC-------------------chhHHHHHHHHHhhcCCCceEEEEecCCC
Q 017812           62 CIVTGATSGLGAAAAYALSREGF-HVVLVGRS-------------------SHLLSETMADITSRNKDARLEAFQVDLSS  121 (365)
Q Consensus        62 vlITGassGIG~~~a~~la~~G~-~Vil~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~~Dls~  121 (365)
                      |+|.|+ ||+|.++++.|+..|. ++.++|.+                   ..+.+.+.+.+++.++..++..+..++++
T Consensus         2 VlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i~~   80 (312)
T cd01489           2 VLVVGA-GGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIKD   80 (312)
T ss_pred             EEEECC-CHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccCCC
Confidence            788886 8999999999999997 89998863                   24666777777888888888888888876


Q ss_pred             hhhHHHHHHHHHHHHhccCCCCCeeEEEecCC
Q 017812          122 FQSVLKFKDSLQQWLLDSDMHSSIQLLINNAG  153 (365)
Q Consensus       122 ~~~v~~~~~~~~~~~~~~~~~~~id~lv~nAG  153 (365)
                      .+...+++             ...|++|++..
T Consensus        81 ~~~~~~f~-------------~~~DvVv~a~D   99 (312)
T cd01489          81 PDFNVEFF-------------KQFDLVFNALD   99 (312)
T ss_pred             ccchHHHH-------------hcCCEEEECCC
Confidence            42222222             24788886654

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=96.79  E-value=0.0097  Score=51.41  Aligned_cols=64  Identities=22%  Similarity=0.412  Sum_probs=48.4

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecC---c---------------hhHHHHHHHHHhhcCCCceEEEEe
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRS---S---------------HLLSETMADITSRNKDARLEAFQV  117 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~---~---------------~~~~~~~~~l~~~~~~~~~~~~~~  117 (365)
                      ++.++|+|.|+ ||+|..+|..|++.|. +|++++++   .               .+.+.+.+.+.+.+|..++..+..
T Consensus        19 L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~~~i~~~~~   97 (200)
T TIGR02354        19 LEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPYTEIEAYDE   97 (200)
T ss_pred             HhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCCCEEEEeee
Confidence            66788999998 7899999999999998 79999987   2               233344555556666667777666


Q ss_pred             cCCC
Q 017812          118 DLSS  121 (365)
Q Consensus       118 Dls~  121 (365)
                      +++.
T Consensus        98 ~i~~  101 (200)
T TIGR02354        98 KITE  101 (200)
T ss_pred             eCCH
Confidence            6653

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=96.78  E-value=0.027  Score=50.82  Aligned_cols=105  Identities=17%  Similarity=0.222  Sum_probs=73.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .|+|++|+||+|..|.-+..----+|++|+.++-.+++.+-+.+++     +..   ..+|-... +   +.+.+.+.. 
T Consensus       150 ~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~l-----GfD---~~idyk~~-d---~~~~L~~a~-  216 (340)
T COG2130         150 AGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEEL-----GFD---AGIDYKAE-D---FAQALKEAC-  216 (340)
T ss_pred             CCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhc-----CCc---eeeecCcc-c---HHHHHHHHC-
Confidence            5999999999999996544433356899999999999887776665     211   12333332 2   333333332 


Q ss_pred             ccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccc
Q 017812          138 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHR  206 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~  206 (365)
                          -..||+.+-|.|-                        -...++++.|..   .+||+..+-++++
T Consensus       217 ----P~GIDvyfeNVGg------------------------~v~DAv~~~ln~---~aRi~~CG~IS~Y  254 (340)
T COG2130         217 ----PKGIDVYFENVGG------------------------EVLDAVLPLLNL---FARIPVCGAISQY  254 (340)
T ss_pred             ----CCCeEEEEEcCCc------------------------hHHHHHHHhhcc---ccceeeeeehhhc
Confidence                3579999999995                        344567777766   4799999998887

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=96.76  E-value=0.013  Score=52.19  Aligned_cols=83  Identities=16%  Similarity=0.314  Sum_probs=59.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCc-------------------hhHHHHHHHHHhhcCCCceEEE
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSS-------------------HLLSETMADITSRNKDARLEAF  115 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~  115 (365)
                      .+++.+|+|.|+ ||+|..+|..|++.|. ++++++.+.                   .|.+.+.+.+.+.+|..++..+
T Consensus        21 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~   99 (240)
T TIGR02355        21 ALKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPI   99 (240)
T ss_pred             HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEE
Confidence            367888999987 6899999999999997 899988742                   3566667778888877777777


Q ss_pred             EecCCChhhHHHHHHHHHHHHhccCCCCCeeEEEecCC
Q 017812          116 QVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAG  153 (365)
Q Consensus       116 ~~Dls~~~~v~~~~~~~~~~~~~~~~~~~id~lv~nAG  153 (365)
                      ...++. +.+.+++             ...|++|.+..
T Consensus       100 ~~~i~~-~~~~~~~-------------~~~DlVvd~~D  123 (240)
T TIGR02355       100 NAKLDD-AELAALI-------------AEHDIVVDCTD  123 (240)
T ss_pred             eccCCH-HHHHHHh-------------hcCCEEEEcCC
Confidence            655543 2232222             24788887665

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PTZ00117 malate dehydrogenase; Provisional

Probab=96.76  E-value=0.034  Score=51.79  Aligned_cols=120  Identities=15%  Similarity=0.204  Sum_probs=73.9

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCC-CEEEEEecCchhHHHHHHHHHhhcC--CCceEEEEecCCChhhHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREG-FHVVLVGRSSHLLSETMADITSRNK--DARLEAFQVDLSSFQSVLKFKDSLQ  133 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G-~~Vil~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dls~~~~v~~~~~~~~  133 (365)
                      .+.+.+.|.|| |.+|..++..++..| +.|++++++++.++...-++.....  +.... +.. -+|.+.   +     
T Consensus         3 ~~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~-i~~-~~d~~~---l-----   71 (319)
T PTZ00117          3 VKRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNIN-ILG-TNNYED---I-----   71 (319)
T ss_pred             CCCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeE-EEe-CCCHHH---h-----
Confidence            35678999997 889999999999999 6999999998765533333322110  11111 111 112221   1     


Q ss_pred             HHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017812          134 QWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  204 (365)
Q Consensus       134 ~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~  204 (365)
                               ..-|++|..||..... ..+.   .+.+..|.    -+.+.+.+.+.+....+.++++|-..
T Consensus        72 ---------~~ADiVVitag~~~~~-g~~r---~dll~~n~----~i~~~i~~~i~~~~p~a~vivvsNP~  125 (319)
T PTZ00117         72 ---------KDSDVVVITAGVQRKE-EMTR---EDLLTING----KIMKSVAESVKKYCPNAFVICVTNPL  125 (319)
T ss_pred             ---------CCCCEEEECCCCCCCC-CCCH---HHHHHHHH----HHHHHHHHHHHHHCCCeEEEEecChH
Confidence                     3479999999985332 2222   34555666    45666777766655456788887644

>PRK08223 hypothetical protein; Validated

Probab=96.76  E-value=0.0099  Score=53.95  Aligned_cols=65  Identities=14%  Similarity=0.256  Sum_probs=51.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecC-------------------chhHHHHHHHHHhhcCCCceEEE
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRS-------------------SHLLSETMADITSRNKDARLEAF  115 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~  115 (365)
                      .+++..|+|.|+ ||+|..+|..|+..|. ++.++|.+                   ..+.+.+.+.+.+.+|..+++.+
T Consensus        24 kL~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~~~  102 (287)
T PRK08223         24 RLRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIRAF  102 (287)
T ss_pred             HHhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEEEE
Confidence            367888999987 5799999999999997 89998874                   23566667777777777777777


Q ss_pred             EecCCC
Q 017812          116 QVDLSS  121 (365)
Q Consensus       116 ~~Dls~  121 (365)
                      ...++.
T Consensus       103 ~~~l~~  108 (287)
T PRK08223        103 PEGIGK  108 (287)
T ss_pred             ecccCc
Confidence            777764

>PRK08328 hypothetical protein; Provisional

Probab=96.76  E-value=0.014  Score=51.67  Aligned_cols=64  Identities=27%  Similarity=0.429  Sum_probs=45.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCch--------------------hHHHHHHHHHhhcCCCceEE
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSH--------------------LLSETMADITSRNKDARLEA  114 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~--------------------~~~~~~~~l~~~~~~~~~~~  114 (365)
                      .+++.+|+|.|+ ||+|.++++.|++.|. ++++++.+.-                    +.+.+.+.+.+.+|..++..
T Consensus        24 ~L~~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np~v~v~~  102 (231)
T PRK08328         24 KLKKAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNSDIKIET  102 (231)
T ss_pred             HHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCCCCEEEE
Confidence            367788999987 5899999999999997 8999986531                    22233344555566666666


Q ss_pred             EEecCC
Q 017812          115 FQVDLS  120 (365)
Q Consensus       115 ~~~Dls  120 (365)
                      +...++
T Consensus       103 ~~~~~~  108 (231)
T PRK08328        103 FVGRLS  108 (231)
T ss_pred             EeccCC
Confidence            665553

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=96.75  E-value=0.012  Score=50.69  Aligned_cols=64  Identities=20%  Similarity=0.298  Sum_probs=49.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCc---------------------hhHHHHHHHHHhhcCCCceEE
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSS---------------------HLLSETMADITSRNKDARLEA  114 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~---------------------~~~~~~~~~l~~~~~~~~~~~  114 (365)
                      +++.+|+|.|+++ +|.++++.|+..|. ++++++.+.                     .+.+.+.+.+++.+|..+++.
T Consensus        17 L~~s~VlviG~gg-lGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~i~~   95 (198)
T cd01485          17 LRSAKVLIIGAGA-LGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVKLSI   95 (198)
T ss_pred             HhhCcEEEECCCH-HHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCCEEEE
Confidence            5677899998765 99999999999998 788887641                     245566777888888888887


Q ss_pred             EEecCCC
Q 017812          115 FQVDLSS  121 (365)
Q Consensus       115 ~~~Dls~  121 (365)
                      +..++.+
T Consensus        96 ~~~~~~~  102 (198)
T cd01485          96 VEEDSLS  102 (198)
T ss_pred             Eeccccc
Confidence            7776653

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>PLN02602 lactate dehydrogenase

Probab=96.74  E-value=0.049  Score=51.27  Aligned_cols=117  Identities=17%  Similarity=0.213  Sum_probs=75.8

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhhcCC-CceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRNKD-ARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~--~Vil~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      +.|.|+|+ |.+|..+|..|+.+|.  ++++++.++++++....++....+- ... .+..+ .+.+.       +    
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~-~i~~~-~dy~~-------~----  103 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRT-KILAS-TDYAV-------T----  103 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCC-EEEeC-CCHHH-------h----
Confidence            68999996 9999999999999885  7999999998887777777654221 112 22211 12111       1    


Q ss_pred             hccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017812          137 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  204 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~  204 (365)
                            ..-|++|..||.... +..+..   +.+..|    .-+.+.+.+.+.+....+.++++|-..
T Consensus       104 ------~daDiVVitAG~~~k-~g~tR~---dll~~N----~~I~~~i~~~I~~~~p~~ivivvtNPv  157 (350)
T PLN02602        104 ------AGSDLCIVTAGARQI-PGESRL---NLLQRN----VALFRKIIPELAKYSPDTILLIVSNPV  157 (350)
T ss_pred             ------CCCCEEEECCCCCCC-cCCCHH---HHHHHH----HHHHHHHHHHHHHHCCCeEEEEecCch
Confidence                  348999999998533 223322   233444    345566666666555468888888644

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=96.72  E-value=0.0084  Score=54.89  Aligned_cols=49  Identities=20%  Similarity=0.254  Sum_probs=39.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCc---hhHHHHHHHHHh
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSS---HLLSETMADITS  105 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~---~~~~~~~~~l~~  105 (365)
                      ++++|+++|-|| ||-+++++..|+..|+ +|+++.|+.   ++++++.+++..
T Consensus       121 ~~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~  173 (288)
T PRK12749        121 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNE  173 (288)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhh
Confidence            357899999997 6779999999999997 899999995   466666666543

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=96.72  E-value=0.023  Score=52.53  Aligned_cols=80  Identities=19%  Similarity=0.187  Sum_probs=54.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .+.+++|+|+++++|.+++..+...|++|+.++++.++.+.+ +++     +..   ...|..+.+..+.    +.+.. 
T Consensus       142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~-~~~-----g~~---~~~~~~~~~~~~~----~~~~~-  207 (324)
T cd08244         142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALV-RAL-----GAD---VAVDYTRPDWPDQ----VREAL-  207 (324)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHc-----CCC---EEEecCCccHHHH----HHHHc-
Confidence            368999999999999999999999999999999998876544 332     221   1233333333222    22211 


Q ss_pred             ccCCCCCeeEEEecCCc
Q 017812          138 DSDMHSSIQLLINNAGI  154 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~  154 (365)
                         ...++|+++++.|.
T Consensus       208 ---~~~~~d~vl~~~g~  221 (324)
T cd08244         208 ---GGGGVTVVLDGVGG  221 (324)
T ss_pred             ---CCCCceEEEECCCh
Confidence               22469999998873

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=96.68  E-value=0.014  Score=55.38  Aligned_cols=83  Identities=18%  Similarity=0.398  Sum_probs=62.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecC-------------------chhHHHHHHHHHhhcCCCceEEE
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRS-------------------SHLLSETMADITSRNKDARLEAF  115 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~  115 (365)
                      .+++.+|+|.|+ ||+|..++..|+..|. ++++++.+                   ..|.+.+.+.+.+.++..++..+
T Consensus        38 ~l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~  116 (370)
T PRK05600         38 RLHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNAL  116 (370)
T ss_pred             HhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEEe
Confidence            367888999987 6899999999999997 99999885                   34677778888888888888888


Q ss_pred             EecCCChhhHHHHHHHHHHHHhccCCCCCeeEEEecCC
Q 017812          116 QVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAG  153 (365)
Q Consensus       116 ~~Dls~~~~v~~~~~~~~~~~~~~~~~~~id~lv~nAG  153 (365)
                      ...++. +.+.+++             ...|++|.+..
T Consensus       117 ~~~i~~-~~~~~~~-------------~~~DlVid~~D  140 (370)
T PRK05600        117 RERLTA-ENAVELL-------------NGVDLVLDGSD  140 (370)
T ss_pred             eeecCH-HHHHHHH-------------hCCCEEEECCC
Confidence            777753 2333222             23788876654

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=96.68  E-value=0.006  Score=54.74  Aligned_cols=74  Identities=16%  Similarity=0.161  Sum_probs=53.9

Q ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhccC
Q 017812           61 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  140 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~~  140 (365)
                      .++|+|||+- |+.++++|.+.|++|+...++....+...+        .....+..+..|.+++.+++.+         
T Consensus         2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~--------~g~~~v~~g~l~~~~l~~~l~~---------   63 (256)
T TIGR00715         2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPI--------HQALTVHTGALDPQELREFLKR---------   63 (256)
T ss_pred             eEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccc--------cCCceEEECCCCHHHHHHHHHh---------
Confidence            5999999998 999999999999999999998764332211        1123455666676766555532         


Q ss_pred             CCCCeeEEEecCCc
Q 017812          141 MHSSIQLLINNAGI  154 (365)
Q Consensus       141 ~~~~id~lv~nAG~  154 (365)
                        .++|++|+.+..
T Consensus        64 --~~i~~VIDAtHP   75 (256)
T TIGR00715        64 --HSIDILVDATHP   75 (256)
T ss_pred             --cCCCEEEEcCCH
Confidence              569999988864

This enzyme was found to be a monomer by gel filtration.

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=96.68  E-value=0.032  Score=54.83  Aligned_cols=115  Identities=17%  Similarity=0.183  Sum_probs=73.2

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCC-------------hh
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSS-------------FQ  123 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~-------------~~  123 (365)
                      ..+.+|+|.|+ |.+|...+..+...|++|++++++.++++.+.+ +     +.  .++..|..+             .+
T Consensus       162 vp~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~-l-----Ga--~~v~v~~~e~g~~~~gYa~~~s~~  232 (511)
T TIGR00561       162 VPPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQS-M-----GA--EFLELDFKEEGGSGDGYAKVMSEE  232 (511)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c-----CC--eEEeccccccccccccceeecCHH
Confidence            45689999996 889999999999999999999999887654443 2     22  344444321             12


Q ss_pred             hHHHHHHHHHHHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCC
Q 017812          124 SVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSF  203 (365)
Q Consensus       124 ~v~~~~~~~~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~  203 (365)
                      ..+...+.+.+      .....|++|+++-+.+...                 +.++++..+..|+.   ++.||-+++.
T Consensus       233 ~~~~~~~~~~e------~~~~~DIVI~TalipG~~a-----------------P~Lit~emv~~MKp---GsvIVDlA~d  286 (511)
T TIGR00561       233 FIAAEMELFAA------QAKEVDIIITTALIPGKPA-----------------PKLITEEMVDSMKA---GSVIVDLAAE  286 (511)
T ss_pred             HHHHHHHHHHH------HhCCCCEEEECcccCCCCC-----------------CeeehHHHHhhCCC---CCEEEEeeeC
Confidence            22222232333      2356999999995543211                 11344555666654   4688889886


Q ss_pred             ccc
Q 017812          204 THR  206 (365)
Q Consensus       204 ~~~  206 (365)
                      .|-
T Consensus       287 ~GG  289 (511)
T TIGR00561       287 QGG  289 (511)
T ss_pred             CCC
Confidence            543

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=96.67  E-value=0.067  Score=49.61  Aligned_cols=117  Identities=16%  Similarity=0.170  Sum_probs=76.2

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhhcCCC-ceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRNKDA-RLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~--~Vil~~r~~~~~~~~~~~l~~~~~~~-~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      ..|.|+|+ |.+|..+|..|+..|.  .+++++.++++++....++....+-. ...+...  .|.+.       +    
T Consensus         4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~--~dy~~-------~----   69 (312)
T cd05293           4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEAD--KDYSV-------T----   69 (312)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEEC--CCHHH-------h----
Confidence            46899996 9999999999999985  79999999988877777776543211 1112211  12221       1    


Q ss_pred             hccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017812          137 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  204 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~  204 (365)
                            ...|++|..||.... +..+.   .+.+..|.    -+.+.+.+.+.+....+.++++|-..
T Consensus        70 ------~~adivvitaG~~~k-~g~~R---~dll~~N~----~i~~~~~~~i~~~~p~~~vivvsNP~  123 (312)
T cd05293          70 ------ANSKVVIVTAGARQN-EGESR---LDLVQRNV----DIFKGIIPKLVKYSPNAILLVVSNPV  123 (312)
T ss_pred             ------CCCCEEEECCCCCCC-CCCCH---HHHHHHHH----HHHHHHHHHHHHhCCCcEEEEccChH
Confidence                  348999999998543 23333   22344444    45566666666655568888888654

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=96.66  E-value=0.027  Score=52.73  Aligned_cols=78  Identities=22%  Similarity=0.269  Sum_probs=52.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCE-EEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFH-VVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~-Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      .|.+++|+|+ |++|..++..+...|++ |+++++++++.+.+ +++     +..   ..+|..+.+ .+++.+ +.   
T Consensus       163 ~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~-~~~-----ga~---~~i~~~~~~-~~~~~~-~~---  227 (339)
T cd08239         163 GRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELA-KAL-----GAD---FVINSGQDD-VQEIRE-LT---  227 (339)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHh-----CCC---EEEcCCcch-HHHHHH-Hh---
Confidence            3789999986 89999999999899998 99999988876544 333     221   223444333 222221 11   


Q ss_pred             hccCCCCCeeEEEecCCc
Q 017812          137 LDSDMHSSIQLLINNAGI  154 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~  154 (365)
                          ...++|++|.+.|.
T Consensus       228 ----~~~~~d~vid~~g~  241 (339)
T cd08239         228 ----SGAGADVAIECSGN  241 (339)
T ss_pred             ----CCCCCCEEEECCCC
Confidence                12369999999884

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=96.66  E-value=0.013  Score=50.44  Aligned_cols=63  Identities=17%  Similarity=0.314  Sum_probs=50.2

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecC-------------------chhHHHHHHHHHhhcCCCceEEEE
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRS-------------------SHLLSETMADITSRNKDARLEAFQ  116 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~  116 (365)
                      +++.+|+|.|+ +|+|.++++.|+..|. ++.+++.+                   ..+.+.+.+.+++.+|..++..+.
T Consensus        19 L~~s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~~   97 (197)
T cd01492          19 LRSARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVDT   97 (197)
T ss_pred             HHhCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEEe
Confidence            56788999975 5599999999999998 79898764                   235667778888888888888777


Q ss_pred             ecCC
Q 017812          117 VDLS  120 (365)
Q Consensus       117 ~Dls  120 (365)
                      ..++
T Consensus        98 ~~~~  101 (197)
T cd01492          98 DDIS  101 (197)
T ss_pred             cCcc
Confidence            6665

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=96.65  E-value=0.043  Score=51.68  Aligned_cols=41  Identities=27%  Similarity=0.311  Sum_probs=36.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSET   99 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~   99 (365)
                      .|++|+|.|+ |+||..++..+...|++|+++++++++++.+
T Consensus       166 ~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~  206 (349)
T TIGR03201       166 KGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMM  206 (349)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH
Confidence            4789999999 9999999999989999999999998877654

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=96.63  E-value=0.026  Score=52.40  Aligned_cols=41  Identities=29%  Similarity=0.397  Sum_probs=36.7

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHH
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSET   99 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~   99 (365)
                      +++++|.|+++++|.+++......|++|+.+++++++.+.+
T Consensus       147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~  187 (326)
T cd08289         147 QGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYL  187 (326)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHH
Confidence            67999999999999999999999999999999998876554

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=96.62  E-value=0.062  Score=50.04  Aligned_cols=124  Identities=16%  Similarity=0.243  Sum_probs=74.0

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhc--CCCceEEEEecCCChhhHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRN--KDARLEAFQVDLSSFQSVLKFKDSLQ  133 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~Dls~~~~v~~~~~~~~  133 (365)
                      ++.+.+.|.|| |.+|..+|..++..|. .|++++.+++.++...-++....  .+....+...  +|.+.       + 
T Consensus         4 ~~~~KI~IIGa-G~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~~--~d~~~-------l-   72 (321)
T PTZ00082          4 IKRRKISLIGS-GNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIGT--NNYED-------I-   72 (321)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEEC--CCHHH-------h-
Confidence            45578999995 7799999999999995 99999999886533222222211  0111222210  22211       1 


Q ss_pred             HHHhccCCCCCeeEEEecCCcccCCCC--CCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017812          134 QWLLDSDMHSSIQLLINNAGILATSSR--LTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  205 (365)
Q Consensus       134 ~~~~~~~~~~~id~lv~nAG~~~~~~~--~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~  205 (365)
                               ..-|++|+.||.......  .+.+ -.+.+..|+    .+.+.+.+.+.+....+.++++|-...
T Consensus        73 ---------~~aDiVI~tag~~~~~~~~~~~~~-r~~~l~~n~----~i~~~i~~~i~~~~p~a~~iv~sNP~d  132 (321)
T PTZ00082         73 ---------AGSDVVIVTAGLTKRPGKSDKEWN-RDDLLPLNA----KIMDEVAEGIKKYCPNAFVIVITNPLD  132 (321)
T ss_pred             ---------CCCCEEEECCCCCCCCCCCcCCCC-HHHHHHHHH----HHHHHHHHHHHHHCCCeEEEEecCcHH
Confidence                     348999999998643211  1111 133445553    466777777766654667888876553

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=96.60  E-value=0.031  Score=51.46  Aligned_cols=42  Identities=26%  Similarity=0.263  Sum_probs=36.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSE   98 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~   98 (365)
                      ++++++++|.|. |++|+.++..|...|++|++++|+.++.+.
T Consensus       149 ~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~  190 (296)
T PRK08306        149 TIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLAR  190 (296)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence            367899999997 679999999999999999999999765443

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=96.58  E-value=0.043  Score=50.97  Aligned_cols=42  Identities=24%  Similarity=0.188  Sum_probs=36.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSET   99 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~   99 (365)
                      .|.+++|.|+++++|.+++......|++|+.+++++++.+.+
T Consensus       139 ~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~  180 (329)
T cd08250         139 SGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFL  180 (329)
T ss_pred             CCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHH
Confidence            478999999999999999998889999999999988765544

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=96.58  E-value=0.0053  Score=60.36  Aligned_cols=47  Identities=19%  Similarity=0.297  Sum_probs=40.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADI  103 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l  103 (365)
                      ++++++++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++
T Consensus       329 ~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~  375 (477)
T PRK09310        329 PLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASRC  375 (477)
T ss_pred             CcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh
Confidence            367899999996 79999999999999999999999988777665543

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.53  E-value=0.0074  Score=50.52  Aligned_cols=42  Identities=17%  Similarity=0.184  Sum_probs=36.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLS   97 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~   97 (365)
                      +++||.++|.|++.-+|..+|+.|.++|++|+++.|+.+.+.
T Consensus        41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~~l~   82 (168)
T cd01080          41 DLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTKNLK   82 (168)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCchhHH
Confidence            578999999999666799999999999999999999864443

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.53  E-value=0.015  Score=53.73  Aligned_cols=42  Identities=24%  Similarity=0.254  Sum_probs=37.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSET   99 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~   99 (365)
                      .+++++|+|+++++|.+++..+...|++|++++++.++.+.+
T Consensus       144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~  185 (328)
T cd08268         144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDAL  185 (328)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH
Confidence            468999999999999999999999999999999988765554

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=96.50  E-value=0.038  Score=51.11  Aligned_cols=43  Identities=19%  Similarity=0.169  Sum_probs=37.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETM  100 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~  100 (365)
                      .|.+++|.|+++++|.+++......|++|+.+.++.++.+.+.
T Consensus       139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~  181 (324)
T cd08292         139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELR  181 (324)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHH
Confidence            4789999999999999999999999999999999887655543

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=96.49  E-value=0.0093  Score=58.00  Aligned_cols=78  Identities=15%  Similarity=0.199  Sum_probs=54.1

Q ss_pred             CCCCCEEEEecC----------------CChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecC
Q 017812           56 GIKRPVCIVTGA----------------TSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDL  119 (365)
Q Consensus        56 ~~~~k~vlITGa----------------ssGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl  119 (365)
                      +++||.||||+|                ||-.|.++|++++.+|++|++++-...        +  .. ...+.++.+  
T Consensus       253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~--------~--~~-p~~v~~i~V--  319 (475)
T PRK13982        253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD--------L--AD-PQGVKVIHV--  319 (475)
T ss_pred             ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC--------C--CC-CCCceEEEe--
Confidence            488999999986                567999999999999999999975432        0  01 223444443  


Q ss_pred             CChhhHHHHHHHHHHHHhccCCCCCeeEEEecCCccc
Q 017812          120 SSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA  156 (365)
Q Consensus       120 s~~~~v~~~~~~~~~~~~~~~~~~~id~lv~nAG~~~  156 (365)
                      .+   .+++.+.+.+.      . +.|++|++|++..
T Consensus       320 ~t---a~eM~~av~~~------~-~~Di~I~aAAVaD  346 (475)
T PRK13982        320 ES---ARQMLAAVEAA------L-PADIAIFAAAVAD  346 (475)
T ss_pred             cC---HHHHHHHHHhh------C-CCCEEEEeccccc
Confidence            33   44445555442      2 2699999999863

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=96.47  E-value=0.045  Score=49.46  Aligned_cols=117  Identities=15%  Similarity=0.165  Sum_probs=73.3

Q ss_pred             EEEecCCChHHHHHHHHHHHCC----CEEEEEecCchhHHHHHHHHHhhcCCC-ceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           62 CIVTGATSGLGAAAAYALSREG----FHVVLVGRSSHLLSETMADITSRNKDA-RLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        62 vlITGassGIG~~~a~~la~~G----~~Vil~~r~~~~~~~~~~~l~~~~~~~-~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      +.|.||+|.+|..+|..|+..|    .+|++.++++++++....++....... ...+..  -+|   ..+.        
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~--~~d---~~~~--------   67 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSI--TDD---PYEA--------   67 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEE--CCc---hHHH--------
Confidence            4689998899999999999999    699999999988888888776542211 111111  112   1111        


Q ss_pred             hccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017812          137 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  204 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~  204 (365)
                           ....|++|..+|..... ..+.   ...+.-    ..-+.+.+.+.+.+....+.++++|-..
T Consensus        68 -----~~~aDiVv~t~~~~~~~-g~~r---~~~~~~----n~~i~~~i~~~i~~~~p~a~~i~~tNP~  122 (263)
T cd00650          68 -----FKDADVVIITAGVGRKP-GMGR---LDLLKR----NVPIVKEIGDNIEKYSPDAWIIVVSNPV  122 (263)
T ss_pred             -----hCCCCEEEECCCCCCCc-CCCH---HHHHHH----HHHHHHHHHHHHHHHCCCeEEEEecCcH
Confidence                 13489999999985332 1111   112222    3345555666665554467888887544

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=96.43  E-value=0.052  Score=49.80  Aligned_cols=42  Identities=26%  Similarity=0.305  Sum_probs=37.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSET   99 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~   99 (365)
                      .+.+++|+|+++++|.+++..+...|++|+.++++.++.+.+
T Consensus       139 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  180 (323)
T cd08241         139 PGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALA  180 (323)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHH
Confidence            478999999999999999999999999999999987765443

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>PLN02740 Alcohol dehydrogenase-like

Probab=96.43  E-value=0.055  Score=51.72  Aligned_cols=79  Identities=11%  Similarity=0.152  Sum_probs=52.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChh-hHHHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQ-SVLKFKDSLQQW  135 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~-~v~~~~~~~~~~  135 (365)
                      .|++|+|.|+ |+||..++..+...|+ +|+++++++++++.+. ++     +.. .+  .|..+.+ +..+.+.++.  
T Consensus       198 ~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~-~~-----Ga~-~~--i~~~~~~~~~~~~v~~~~--  265 (381)
T PLN02740        198 AGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKGK-EM-----GIT-DF--INPKDSDKPVHERIREMT--  265 (381)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHH-Hc-----CCc-EE--EecccccchHHHHHHHHh--
Confidence            4889999996 8999999998889999 6999999988766553 22     222 12  2433321 2222222221  


Q ss_pred             HhccCCCCCeeEEEecCCc
Q 017812          136 LLDSDMHSSIQLLINNAGI  154 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~  154 (365)
                            .+.+|+++.++|.
T Consensus       266 ------~~g~dvvid~~G~  278 (381)
T PLN02740        266 ------GGGVDYSFECAGN  278 (381)
T ss_pred             ------CCCCCEEEECCCC
Confidence                  1369999999985

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=96.41  E-value=0.074  Score=48.65  Aligned_cols=42  Identities=17%  Similarity=0.080  Sum_probs=37.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSET   99 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~   99 (365)
                      .|++++|.|+++++|.+++......|++|+.+++++++.+.+
T Consensus       136 ~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  177 (320)
T cd05286         136 PGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELA  177 (320)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHH
Confidence            478999999999999999999999999999999888775544

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=96.41  E-value=0.056  Score=49.94  Aligned_cols=42  Identities=21%  Similarity=0.183  Sum_probs=37.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSET   99 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~   99 (365)
                      .|.+++|.|+++++|.+++..+..+|++|++++++.++.+.+
T Consensus       138 ~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~  179 (323)
T cd05282         138 PGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEEL  179 (323)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHH
Confidence            478999999999999999999999999999999988765444

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=96.41  E-value=0.0063  Score=42.89  Aligned_cols=34  Identities=26%  Similarity=0.345  Sum_probs=22.9

Q ss_pred             CEEEEecCCChHHHHHHHHHH-HCCCEEEEEecCc
Q 017812           60 PVCIVTGATSGLGAAAAYALS-REGFHVVLVGRSS   93 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la-~~G~~Vil~~r~~   93 (365)
                      |+|||+|+|+|.|++....++ ..|++.+-++...
T Consensus        40 K~VLViGaStGyGLAsRIa~aFg~gA~TiGV~fEk   74 (78)
T PF12242_consen   40 KKVLVIGASTGYGLASRIAAAFGAGADTIGVSFEK   74 (78)
T ss_dssp             SEEEEES-SSHHHHHHHHHHHHCC--EEEEEE---
T ss_pred             ceEEEEecCCcccHHHHHHHHhcCCCCEEEEeecc
Confidence            899999999999999555554 6778888777653

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=96.38  E-value=0.062  Score=51.97  Aligned_cols=116  Identities=9%  Similarity=0.076  Sum_probs=77.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHC-------CC--EEEEEecCchhHHHHHHHHHhhc-CC-CceEEEEecCCChhhHHHHH
Q 017812           61 VCIVTGATSGLGAAAAYALSRE-------GF--HVVLVGRSSHLLSETMADITSRN-KD-ARLEAFQVDLSSFQSVLKFK  129 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~-------G~--~Vil~~r~~~~~~~~~~~l~~~~-~~-~~~~~~~~Dls~~~~v~~~~  129 (365)
                      .|.|+|++|.+|.++|..|+..       |.  +++++++++++++...-++.... +- .++.+ ..  .+.+.     
T Consensus       102 KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i-~~--~~ye~-----  173 (444)
T PLN00112        102 NVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSI-GI--DPYEV-----  173 (444)
T ss_pred             EEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEE-ec--CCHHH-----
Confidence            5999999999999999999988       74  89999999999988888886643 11 12211 11  12221     


Q ss_pred             HHHHHHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhc-CCCCCeEEEEcCCc
Q 017812          130 DSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKN-SPVPSRIVNVTSFT  204 (365)
Q Consensus       130 ~~~~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~-~~~~g~iV~vsS~~  204 (365)
                                  ...-|++|..||.... +..+.   .+.++.|.    -+.+.+.+.+.+ .+..+.||++|-..
T Consensus       174 ------------~kdaDiVVitAG~prk-pG~tR---~dLl~~N~----~I~k~i~~~I~~~a~p~~ivIVVsNPv  229 (444)
T PLN00112        174 ------------FQDAEWALLIGAKPRG-PGMER---ADLLDING----QIFAEQGKALNEVASRNVKVIVVGNPC  229 (444)
T ss_pred             ------------hCcCCEEEECCCCCCC-CCCCH---HHHHHHHH----HHHHHHHHHHHHhcCCCeEEEEcCCcH
Confidence                        2458999999998532 22332   23455554    456666666666 34467888888543

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=96.37  E-value=0.09  Score=48.51  Aligned_cols=115  Identities=19%  Similarity=0.219  Sum_probs=73.7

Q ss_pred             EEecCCChHHHHHHHHHHHCC--CEEEEEecCchhHHHHHHHHHhhcCC-CceEEEEecCCChhhHHHHHHHHHHHHhcc
Q 017812           63 IVTGATSGLGAAAAYALSREG--FHVVLVGRSSHLLSETMADITSRNKD-ARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  139 (365)
Q Consensus        63 lITGassGIG~~~a~~la~~G--~~Vil~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~  139 (365)
                      .|.|+ |++|..+|..|+..|  .+++++++++++++....++...... ........  .|.+       .        
T Consensus         2 ~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~--~~~~-------~--------   63 (300)
T cd00300           2 TIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRG--GDYA-------D--------   63 (300)
T ss_pred             EEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEEC--CCHH-------H--------
Confidence            57787 679999999999999  58999999999888888888665322 11122211  1111       1        


Q ss_pred             CCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017812          140 DMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  205 (365)
Q Consensus       140 ~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~  205 (365)
                        ...-|++|..||.... ...+.   .+.+..|    .-+.+.+.+.+.+....+.++++|....
T Consensus        64 --l~~aDiVIitag~p~~-~~~~R---~~l~~~n----~~i~~~~~~~i~~~~p~~~viv~sNP~d  119 (300)
T cd00300          64 --AADADIVVITAGAPRK-PGETR---LDLINRN----APILRSVITNLKKYGPDAIILVVSNPVD  119 (300)
T ss_pred             --hCCCCEEEEcCCCCCC-CCCCH---HHHHHHH----HHHHHHHHHHHHHhCCCeEEEEccChHH
Confidence              1358999999998532 22222   2333344    4455666666665554688888886543

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>PRK04148 hypothetical protein; Provisional

Probab=96.36  E-value=0.012  Score=46.93  Aligned_cols=56  Identities=21%  Similarity=0.233  Sum_probs=45.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQ  123 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~  123 (365)
                      +++.+++.|.+  -|.++|..|++.|++|++++.+++..+.+.+.        .+.++..|+.+++
T Consensus        16 ~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~--------~~~~v~dDlf~p~   71 (134)
T PRK04148         16 KNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKKL--------GLNAFVDDLFNPN   71 (134)
T ss_pred             cCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHh--------CCeEEECcCCCCC
Confidence            45789999987  77888999999999999999999865554332        3678999999865

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=96.32  E-value=0.056  Score=49.73  Aligned_cols=42  Identities=24%  Similarity=0.188  Sum_probs=37.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSET   99 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~   99 (365)
                      .|.+++|.|+++++|.+++......|++|+.+++++++.+.+
T Consensus       142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  183 (320)
T cd08243         142 PGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALL  183 (320)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            478999999999999999999999999999999988765444

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=96.32  E-value=0.083  Score=50.23  Aligned_cols=78  Identities=18%  Similarity=0.228  Sum_probs=51.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      .|++|+|+|+ ++||..++..+...|+ +|+++++++++++-+ +++     +..   ...|..+.+    +.+++.+. 
T Consensus       191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a-~~~-----Ga~---~~i~~~~~~----~~~~i~~~-  255 (371)
T cd08281         191 PGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALA-REL-----GAT---ATVNAGDPN----AVEQVREL-  255 (371)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHH-HHc-----CCc---eEeCCCchh----HHHHHHHH-
Confidence            4789999985 8999998888888899 699999998876544 333     221   123333322    22223321 


Q ss_pred             hccCCCCCeeEEEecCCc
Q 017812          137 LDSDMHSSIQLLINNAGI  154 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~  154 (365)
                          ..+++|++|.+.|.
T Consensus       256 ----~~~g~d~vid~~G~  269 (371)
T cd08281         256 ----TGGGVDYAFEMAGS  269 (371)
T ss_pred             ----hCCCCCEEEECCCC
Confidence                12369999999884

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.32  E-value=0.019  Score=55.67  Aligned_cols=47  Identities=19%  Similarity=0.340  Sum_probs=40.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADI  103 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l  103 (365)
                      ++.+++++|.|+ |++|..+++.|...|+ +|++++|+.+++++..+++
T Consensus       179 ~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~  226 (423)
T PRK00045        179 DLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEF  226 (423)
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc
Confidence            367899999987 9999999999999997 8999999998877666554

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=96.30  E-value=0.1  Score=48.42  Aligned_cols=42  Identities=21%  Similarity=0.287  Sum_probs=36.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSET   99 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~   99 (365)
                      .|.+++|+|+++++|.+++..+...|++++++.++.++.+.+
T Consensus       140 ~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  181 (334)
T PTZ00354        140 KGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFC  181 (334)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            478999999999999999999999999988899888765554

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=96.29  E-value=0.081  Score=48.92  Aligned_cols=116  Identities=14%  Similarity=0.158  Sum_probs=76.4

Q ss_pred             EEEecCCChHHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhhcC---CCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           62 CIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRNK---DARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        62 vlITGassGIG~~~a~~la~~G~--~Vil~~r~~~~~~~~~~~l~~~~~---~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      |.|.|+ |.+|..+|..|+.+|.  ++++++.++++++....++....+   ..++.....   +.+.            
T Consensus         2 i~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~---~y~~------------   65 (307)
T cd05290           2 LVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAG---DYDD------------   65 (307)
T ss_pred             EEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEEC---CHHH------------
Confidence            678898 9999999999999985  799999999888877777765322   123333322   2221            


Q ss_pred             hccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017812          137 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  204 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~  204 (365)
                           ...-|++|..||.... +..+.+ =.+.++.|    ..+.+.+.|.+.+....+.++++|-..
T Consensus        66 -----~~~aDivvitaG~~~k-pg~tr~-R~dll~~N----~~I~~~i~~~i~~~~p~~i~ivvsNPv  122 (307)
T cd05290          66 -----CADADIIVITAGPSID-PGNTDD-RLDLAQTN----AKIIREIMGNITKVTKEAVIILITNPL  122 (307)
T ss_pred             -----hCCCCEEEECCCCCCC-CCCCch-HHHHHHHH----HHHHHHHHHHHHHhCCCeEEEEecCcH
Confidence                 1348999999998532 223310 12234444    456777778777766567777776543

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=96.29  E-value=0.056  Score=51.15  Aligned_cols=79  Identities=19%  Similarity=0.234  Sum_probs=51.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      .|++|+|.|+ |++|...+......|+ +|+.+++++++.+.+. ++     +..   ...|..+.+..+    .+.+..
T Consensus       176 ~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~-~~-----Ga~---~~i~~~~~~~~~----~i~~~~  241 (358)
T TIGR03451       176 RGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWAR-EF-----GAT---HTVNSSGTDPVE----AIRALT  241 (358)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hc-----CCc---eEEcCCCcCHHH----HHHHHh
Confidence            4789999985 9999999988888898 5999999887765542 22     221   122333332222    222211


Q ss_pred             hccCCCCCeeEEEecCCc
Q 017812          137 LDSDMHSSIQLLINNAGI  154 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~  154 (365)
                          ...++|+++.+.|.
T Consensus       242 ----~~~g~d~vid~~g~  255 (358)
T TIGR03451       242 ----GGFGADVVIDAVGR  255 (358)
T ss_pred             ----CCCCCCEEEECCCC
Confidence                12358999998884

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=96.29  E-value=0.0061  Score=52.89  Aligned_cols=39  Identities=13%  Similarity=0.264  Sum_probs=34.2

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCch
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH   94 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~   94 (365)
                      -+++||.|+|.|| |.+|..-++.|.+.|++|++++.+..
T Consensus         5 l~l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~   43 (205)
T TIGR01470         5 ANLEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELE   43 (205)
T ss_pred             EEcCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCC
Confidence            3588999999998 45999999999999999999988764

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.28  E-value=0.024  Score=53.33  Aligned_cols=81  Identities=21%  Similarity=0.285  Sum_probs=52.7

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      -+|+.+||.||+||+|.+.++-....|+..++++++.++. +..+++     +.   -...|..+++-+    +++++. 
T Consensus       156 ~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~-~l~k~l-----GA---d~vvdy~~~~~~----e~~kk~-  221 (347)
T KOG1198|consen  156 SKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKL-ELVKKL-----GA---DEVVDYKDENVV----ELIKKY-  221 (347)
T ss_pred             CCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchH-HHHHHc-----CC---cEeecCCCHHHH----HHHHhh-
Confidence            3588999999999999999988888895444555554443 333333     21   234566663333    333321 


Q ss_pred             hccCCCCCeeEEEecCCcc
Q 017812          137 LDSDMHSSIQLLINNAGIL  155 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~  155 (365)
                          ..+++|+++-+.|-.
T Consensus       222 ----~~~~~DvVlD~vg~~  236 (347)
T KOG1198|consen  222 ----TGKGVDVVLDCVGGS  236 (347)
T ss_pred             ----cCCCccEEEECCCCC
Confidence                246899999999963

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=96.28  E-value=0.033  Score=51.51  Aligned_cols=116  Identities=16%  Similarity=0.212  Sum_probs=69.8

Q ss_pred             EEEecCCChHHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhcc
Q 017812           62 CIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  139 (365)
Q Consensus        62 vlITGassGIG~~~a~~la~~G~--~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~  139 (365)
                      |.|+|++|.+|..+|..|+.+|.  .++++++++  .+....++....  ....+....-.  ++.       .+     
T Consensus         2 V~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~--a~g~a~DL~~~~--~~~~i~~~~~~--~~~-------~~-----   63 (312)
T TIGR01772         2 VAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG--AAGVAADLSHIP--TAASVKGFSGE--EGL-------EN-----   63 (312)
T ss_pred             EEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC--CcEEEchhhcCC--cCceEEEecCC--Cch-------HH-----
Confidence            78999999999999999999985  799999986  222222222211  11111110000  000       01     


Q ss_pred             CCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017812          140 DMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  204 (365)
Q Consensus       140 ~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~  204 (365)
                       ....-|++|..||.... +..+   =.+.+..|+-    +.+.+.+.+.+....+.|+++|-..
T Consensus        64 -~~~daDivvitaG~~~~-~g~~---R~dll~~N~~----I~~~i~~~i~~~~p~~iiivvsNPv  119 (312)
T TIGR01772        64 -ALKGADVVVIPAGVPRK-PGMT---RDDLFNVNAG----IVKDLVAAVAESCPKAMILVITNPV  119 (312)
T ss_pred             -HcCCCCEEEEeCCCCCC-CCcc---HHHHHHHhHH----HHHHHHHHHHHhCCCeEEEEecCch
Confidence             23568999999998532 2222   2335666665    6666666666655567888888765

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=96.26  E-value=0.011  Score=54.07  Aligned_cols=42  Identities=29%  Similarity=0.260  Sum_probs=37.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSE   98 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~   98 (365)
                      +++|++++|.|. |+||+++|+.|...|++|++.+|+.++.+.
T Consensus       148 ~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~  189 (287)
T TIGR02853       148 TIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLAR  189 (287)
T ss_pred             CCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence            578999999999 679999999999999999999999876544

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=96.26  E-value=0.071  Score=49.56  Aligned_cols=42  Identities=19%  Similarity=0.211  Sum_probs=34.2

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHH
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETM  100 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~  100 (365)
                      +++++++||++++|..++......|++|+.+++++++.+.+.
T Consensus       144 ~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~  185 (324)
T cd08291         144 AKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLK  185 (324)
T ss_pred             CcEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence            455666799999999998877788999999999987765543

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.24  E-value=0.026  Score=54.58  Aligned_cols=47  Identities=19%  Similarity=0.351  Sum_probs=40.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCC-CEEEEEecCchhHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREG-FHVVLVGRSSHLLSETMADI  103 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G-~~Vil~~r~~~~~~~~~~~l  103 (365)
                      ++.+++++|.|+ |.+|..+++.|...| .+|++++|+.+++++..+++
T Consensus       177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~  224 (417)
T TIGR01035       177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKEL  224 (417)
T ss_pred             CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc
Confidence            467899999997 999999999999999 68999999988776665554

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=96.22  E-value=0.041  Score=48.67  Aligned_cols=60  Identities=15%  Similarity=0.340  Sum_probs=46.5

Q ss_pred             EEEecCCChHHHHHHHHHHHCCC-EEEEEecCc-------------------hhHHHHHHHHHhhcCCCceEEEEecCCC
Q 017812           62 CIVTGATSGLGAAAAYALSREGF-HVVLVGRSS-------------------HLLSETMADITSRNKDARLEAFQVDLSS  121 (365)
Q Consensus        62 vlITGassGIG~~~a~~la~~G~-~Vil~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~~Dls~  121 (365)
                      |+|.| .||+|.++++.|+..|. ++.+++.+.                   .|.+.+.+.+.+.+|..++..+..++++
T Consensus         2 VlvvG-~GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~~~~~i~~   80 (234)
T cd01484           2 VLLVG-AGGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVPYQNKVGP   80 (234)
T ss_pred             EEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEEEeccCCh
Confidence            66777 57999999999999997 899988742                   3556666777777777788888777765


Q ss_pred             h
Q 017812          122 F  122 (365)
Q Consensus       122 ~  122 (365)
                      .
T Consensus        81 ~   81 (234)
T cd01484          81 E   81 (234)
T ss_pred             h
Confidence            3

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=96.22  E-value=0.041  Score=50.85  Aligned_cols=117  Identities=15%  Similarity=0.146  Sum_probs=69.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhc
Q 017812           61 VCIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  138 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G~--~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~  138 (365)
                      .+.|+|++|.+|..+|..|+.+|.  .+++++.+  +++...-++......  .....+.  ..+++   .+        
T Consensus         2 KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~~~--~~i~~~~--~~~~~---y~--------   64 (310)
T cd01337           2 KVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHINTP--AKVTGYL--GPEEL---KK--------   64 (310)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCCCc--ceEEEec--CCCch---HH--------
Confidence            588999999999999999999984  89999998  433333444332111  1111110  00111   11        


Q ss_pred             cCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017812          139 SDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  204 (365)
Q Consensus       139 ~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~  204 (365)
                        ....-|++|..||.... +..+.   .+.++.|.--    .+.+.+.+.+....+.++++|-..
T Consensus        65 --~~~daDivvitaG~~~k-~g~tR---~dll~~N~~i----~~~i~~~i~~~~p~a~vivvtNPv  120 (310)
T cd01337          65 --ALKGADVVVIPAGVPRK-PGMTR---DDLFNINAGI----VRDLATAVAKACPKALILIISNPV  120 (310)
T ss_pred             --hcCCCCEEEEeCCCCCC-CCCCH---HHHHHHHHHH----HHHHHHHHHHhCCCeEEEEccCch
Confidence              22458999999998532 22222   3455666544    444444444444468888888765

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK06223 malate dehydrogenase; Reviewed

Probab=96.18  E-value=0.13  Score=47.65  Aligned_cols=117  Identities=16%  Similarity=0.203  Sum_probs=68.7

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcC--CCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNK--DARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      +.+.|.|| |-+|..+|..++..|. +|+++++++++++....++.....  ..... +.. -+|.+   .    +    
T Consensus         3 ~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~-i~~-~~d~~---~----~----   68 (307)
T PRK06223          3 KKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTK-ITG-TNDYE---D----I----   68 (307)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcE-EEe-CCCHH---H----H----
Confidence            46899999 8899999999999875 999999998876554444433211  01111 111 11211   1    1    


Q ss_pred             hccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017812          137 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  204 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~  204 (365)
                            ..-|++|..+|+.... ..+.   .+.+.-|.    -+.+.+.+.+.+....+.+|+++-..
T Consensus        69 ------~~aDiVii~~~~p~~~-~~~r---~~~~~~n~----~i~~~i~~~i~~~~~~~~viv~tNP~  122 (307)
T PRK06223         69 ------AGSDVVVITAGVPRKP-GMSR---DDLLGINA----KIMKDVAEGIKKYAPDAIVIVVTNPV  122 (307)
T ss_pred             ------CCCCEEEECCCCCCCc-CCCH---HHHHHHHH----HHHHHHHHHHHHHCCCeEEEEecCcH
Confidence                  3489999999985322 2221   22333333    45555555555544356777776544

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.16  E-value=0.86  Score=40.41  Aligned_cols=161  Identities=14%  Similarity=0.161  Sum_probs=93.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .|.+|||--|.||.|..++..+...|++++.+..+.++.+.+++.      +.   -+.+|.+.++-++++. ++.    
T Consensus       146 pGhtVlvhaAAGGVGlll~Ql~ra~~a~tI~~asTaeK~~~aken------G~---~h~I~y~~eD~v~~V~-kiT----  211 (336)
T KOG1197|consen  146 PGHTVLVHAAAGGVGLLLCQLLRAVGAHTIATASTAEKHEIAKEN------GA---EHPIDYSTEDYVDEVK-KIT----  211 (336)
T ss_pred             CCCEEEEEeccccHHHHHHHHHHhcCcEEEEEeccHHHHHHHHhc------CC---cceeeccchhHHHHHH-hcc----
Confidence            489999999999999999999999999999999988876554432      22   2345666655444432 222    


Q ss_pred             ccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcc
Q 017812          138 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNET  217 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~  217 (365)
                         ...++|++.-..|.         |.++..               +..++.   .|.+|..+-.++...+   .+...
T Consensus       212 ---ngKGVd~vyDsvG~---------dt~~~s---------------l~~Lk~---~G~mVSfG~asgl~~p---~~l~~  258 (336)
T KOG1197|consen  212 ---NGKGVDAVYDSVGK---------DTFAKS---------------LAALKP---MGKMVSFGNASGLIDP---IPLNQ  258 (336)
T ss_pred             ---CCCCceeeeccccc---------hhhHHH---------------HHHhcc---CceEEEeccccCCCCC---eehhh
Confidence               23579998877775         111111               112222   3788887766655221   11222


Q ss_pred             ccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecC
Q 017812          218 ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADP  268 (365)
Q Consensus       218 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~P  268 (365)
                      +..+.++  .-.|.+-.|-....-+..++..+=.+.. .+.-+|+++.+.|
T Consensus       259 ls~k~l~--lvrpsl~gYi~g~~el~~~v~rl~alvn-sg~lk~~I~~~yp  306 (336)
T KOG1197|consen  259 LSPKALQ--LVRPSLLGYIDGEVELVSYVARLFALVN-SGHLKIHIDHVYP  306 (336)
T ss_pred             cChhhhh--hccHhhhcccCCHHHHHHHHHHHHHHhh-cCccceeeeeecc
Confidence            2111111  2234555676666666655544444432 1234556665553

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=96.12  E-value=0.08  Score=50.03  Aligned_cols=41  Identities=24%  Similarity=0.288  Sum_probs=34.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSET   99 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~   99 (365)
                      .|++++|+| ++++|.+++..+...|+ +|+++++++++.+.+
T Consensus       177 ~g~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~  218 (361)
T cd08231         177 AGDTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPERLELA  218 (361)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence            578999997 59999999998889999 999999887765433

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.12  E-value=0.077  Score=48.61  Aligned_cols=43  Identities=30%  Similarity=0.256  Sum_probs=37.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETM  100 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~  100 (365)
                      .|.+++|+|+++++|.+++..+...|++|+.+++++++.+.+.
T Consensus       132 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~  174 (305)
T cd08270         132 LGRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAEGLR  174 (305)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence            4789999999999999999999999999999999887665543

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>TIGR01381 E1_like_apg7 E1-like protein-activating enzyme Gsa7p/Apg7p

Probab=96.11  E-value=0.026  Score=56.46  Aligned_cols=63  Identities=14%  Similarity=0.185  Sum_probs=50.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecC----------------------chhHHHHHHHHHhhcCCCce
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRS----------------------SHLLSETMADITSRNKDARL  112 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~----------------------~~~~~~~~~~l~~~~~~~~~  112 (365)
                      .+++.+|+|.|| ||+|..+|+.|+..|. ++++++.+                      ..|.+.+.+.+++.+|+.++
T Consensus       335 kL~~~kVLIvGa-GGLGs~VA~~La~~GVg~ItlVD~D~Ve~SNL~RQ~Lf~~~Dv~~~Gk~KA~aAa~~Lk~InP~v~i  413 (664)
T TIGR01381       335 RYSQLKVLLLGA-GTLGCNVARCLIGWGVRHITFVDNGKVSYSNPVRQSLSNFEDCLLGGRGKAETAQKALKRIFPSIQA  413 (664)
T ss_pred             HHhcCeEEEECC-cHHHHHHHHHHHHcCCCeEEEEcCCEECCCccccccccchhhhhhcCCcHHHHHHHHHHHHCCCcEE
Confidence            367889999998 6799999999999997 89998862                      23566677888888888888


Q ss_pred             EEEEecC
Q 017812          113 EAFQVDL  119 (365)
Q Consensus       113 ~~~~~Dl  119 (365)
                      ..+...+
T Consensus       414 ~~~~~~I  420 (664)
T TIGR01381       414 TGHRLTV  420 (664)
T ss_pred             EEeeeee
Confidence            8777663

This model represents a family of eukaryotic proteins found in animals, plants, and yeasts, including Apg7p (YHR171W) from Saccharomyces cerevisiae and GSA7 from Pichia pastoris. Members are about 650 to 700 residues in length and include a central domain of about 150 residues shared with the ThiF/MoeB/HesA family of proteins. A low level of similarity to ubiquitin-activating enzyme E1 is described in a paper on peroxisome autophagy mediated by GSA7, and is the basis of the name ubiquitin activating enzyme E1-like protein. Members of the family appear to be involved in protein lipidation events analogous to ubiquitination and required for membrane fusion events during autophagy.

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=96.11  E-value=0.11  Score=48.39  Aligned_cols=114  Identities=11%  Similarity=0.106  Sum_probs=70.9

Q ss_pred             EEEEecCCChHHHHHHHHHHHCCC-------EEEEEecCc--hhHHHHHHHHHhhc-CCC-ceEEEEecCCChhhHHHHH
Q 017812           61 VCIVTGATSGLGAAAAYALSREGF-------HVVLVGRSS--HLLSETMADITSRN-KDA-RLEAFQVDLSSFQSVLKFK  129 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G~-------~Vil~~r~~--~~~~~~~~~l~~~~-~~~-~~~~~~~Dls~~~~v~~~~  129 (365)
                      .|.|+||+|.+|..+|..|+..|.       .+++.+.++  ++++....++.... +.. .++. ..  .+.+      
T Consensus         5 KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i-~~--~~~~------   75 (323)
T TIGR01759         5 RVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVA-TT--DPEE------   75 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEE-ec--ChHH------
Confidence            589999999999999999999884       799999965  44666666664432 110 1111 10  1111      


Q ss_pred             HHHHHHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCC-CCeEEEEcC
Q 017812          130 DSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPV-PSRIVNVTS  202 (365)
Q Consensus       130 ~~~~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~-~g~iV~vsS  202 (365)
                                 ....-|++|..||.... +..+.   .+.+..|.    -+.+.+.+.+.+... .+.++++|-
T Consensus        76 -----------~~~daDvVVitAG~~~k-~g~tR---~dll~~Na----~i~~~i~~~i~~~~~~~~iiivvsN  130 (323)
T TIGR01759        76 -----------AFKDVDAALLVGAFPRK-PGMER---ADLLSKNG----KIFKEQGKALNKVAKKDVKVLVVGN  130 (323)
T ss_pred             -----------HhCCCCEEEEeCCCCCC-CCCcH---HHHHHHHH----HHHHHHHHHHHhhCCCCeEEEEeCC
Confidence                       12458999999998532 22232   33455554    455556666665543 577888774

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=96.10  E-value=0.085  Score=48.77  Aligned_cols=41  Identities=29%  Similarity=0.390  Sum_probs=35.8

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHH
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSET   99 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~   99 (365)
                      +.+++|.|+++++|.+++......|++|+++++++++.+.+
T Consensus       147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~  187 (325)
T cd05280         147 DGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQADYL  187 (325)
T ss_pred             CCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            46899999999999999998888999999999998765544

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.09  E-value=0.031  Score=51.89  Aligned_cols=46  Identities=24%  Similarity=0.395  Sum_probs=39.7

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADI  103 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l  103 (365)
                      +.+++++|.|+ |.||..+++.|...|+ +|++++|+.++.++..+++
T Consensus       176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~  222 (311)
T cd05213         176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKEL  222 (311)
T ss_pred             ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHc
Confidence            57899999998 9999999999999774 8999999998877766665

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=96.09  E-value=0.046  Score=52.11  Aligned_cols=86  Identities=16%  Similarity=0.273  Sum_probs=61.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      ++++++++|.||+ -+|.-+|++|+++|. +|+++.|+.++++++.+++.            .+....+++....     
T Consensus       175 ~L~~~~vlvIGAG-em~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~------------~~~~~l~el~~~l-----  236 (414)
T COG0373         175 SLKDKKVLVIGAG-EMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG------------AEAVALEELLEAL-----  236 (414)
T ss_pred             ccccCeEEEEccc-HHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC------------CeeecHHHHHHhh-----
Confidence            4789999999984 599999999999995 89999999999998888873            1222223333322     


Q ss_pred             HHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHh
Q 017812          135 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQM  169 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~  169 (365)
                              ...|++|.+.|...+  -++.+.++..
T Consensus       237 --------~~~DvVissTsa~~~--ii~~~~ve~a  261 (414)
T COG0373         237 --------AEADVVISSTSAPHP--IITREMVERA  261 (414)
T ss_pred             --------hhCCEEEEecCCCcc--ccCHHHHHHH
Confidence                    348999988875433  3445555544

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=96.09  E-value=0.12  Score=49.55  Aligned_cols=42  Identities=24%  Similarity=0.204  Sum_probs=36.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSET   99 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~   99 (365)
                      .+.+++|+|+++++|.+++......|+++++++++.++.+.+
T Consensus       193 ~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~  234 (393)
T cd08246         193 PGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYC  234 (393)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH
Confidence            478999999999999999988889999999999888776554

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=96.08  E-value=0.12  Score=49.71  Aligned_cols=42  Identities=24%  Similarity=0.168  Sum_probs=36.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSET   99 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~   99 (365)
                      .|.+++|+|+++++|.+++..+...|+++++++++.++.+.+
T Consensus       189 ~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~  230 (398)
T TIGR01751       189 PGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYC  230 (398)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH
Confidence            478999999999999999988889999998888887665443

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=96.08  E-value=0.13  Score=46.91  Aligned_cols=40  Identities=33%  Similarity=0.253  Sum_probs=33.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCE-EEEEecCchhHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFH-VVLVGRSSHLLSE   98 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~-Vil~~r~~~~~~~   98 (365)
                      .|++|+|.|+ |+||...+..+...|++ |+++++++++.+.
T Consensus       120 ~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~  160 (280)
T TIGR03366       120 KGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRREL  160 (280)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH
Confidence            4789999987 89999999888888986 8888888776543

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=96.05  E-value=0.03  Score=43.50  Aligned_cols=71  Identities=15%  Similarity=0.207  Sum_probs=52.4

Q ss_pred             EEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhccCC
Q 017812           62 CIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDM  141 (365)
Q Consensus        62 vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~~~  141 (365)
                      ++|-|.+ .+|+.+++.|.+.+.+|++++++++..+++.++        .+.++..|.++++.++++            .
T Consensus         1 vvI~G~g-~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~--------~~~~i~gd~~~~~~l~~a------------~   59 (116)
T PF02254_consen    1 VVIIGYG-RIGREIAEQLKEGGIDVVVIDRDPERVEELREE--------GVEVIYGDATDPEVLERA------------G   59 (116)
T ss_dssp             EEEES-S-HHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHT--------TSEEEES-TTSHHHHHHT------------T
T ss_pred             eEEEcCC-HHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhc--------ccccccccchhhhHHhhc------------C
Confidence            5677775 699999999999777999999998876554432        267899999998877664            2


Q ss_pred             CCCeeEEEecCC
Q 017812          142 HSSIQLLINNAG  153 (365)
Q Consensus       142 ~~~id~lv~nAG  153 (365)
                      ....+.+|...+
T Consensus        60 i~~a~~vv~~~~   71 (116)
T PF02254_consen   60 IEKADAVVILTD   71 (116)
T ss_dssp             GGCESEEEEESS
T ss_pred             ccccCEEEEccC
Confidence            245777776655

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=96.05  E-value=0.0048  Score=47.24  Aligned_cols=37  Identities=22%  Similarity=0.282  Sum_probs=32.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCc
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS   93 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~   93 (365)
                      +++|+.|+|.|| |.+|..-++.|.+.|++|++++.+.
T Consensus         4 ~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~   40 (103)
T PF13241_consen    4 DLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI   40 (103)
T ss_dssp             --TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred             EcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch
Confidence            478999999999 8899999999999999999999986

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.04  E-value=0.035  Score=54.28  Aligned_cols=57  Identities=21%  Similarity=0.173  Sum_probs=43.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhH
Q 017812           61 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSV  125 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v  125 (365)
                      .++|.|+ |.+|.++++.|.++|..|+++++++++.+++.+.       ..+.++..|.++.+.+
T Consensus         2 ~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~-------~~~~~~~gd~~~~~~l   58 (453)
T PRK09496          2 KIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDR-------LDVRTVVGNGSSPDVL   58 (453)
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhh-------cCEEEEEeCCCCHHHH
Confidence            5888888 8999999999999999999999999877665432       1345556666655443

>cd08230 glucose_DH Glucose dehydrogenase

Probab=96.04  E-value=0.09  Score=49.64  Aligned_cols=34  Identities=32%  Similarity=0.468  Sum_probs=30.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecC
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRS   92 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~   92 (365)
                      .|++|+|+|+ |++|...+..+...|++|++++|+
T Consensus       172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~  205 (355)
T cd08230         172 NPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRR  205 (355)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecC
Confidence            4789999986 999999998888889999999984

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=96.03  E-value=0.081  Score=41.88  Aligned_cols=92  Identities=22%  Similarity=0.305  Sum_probs=60.1

Q ss_pred             hHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhccCCCCCeeEEE
Q 017812           70 GLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLI  149 (365)
Q Consensus        70 GIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~~~~~~id~lv  149 (365)
                      |||...+.-+...|++|+++++++++.+.+. ++     +.   ...+|-++.+    +.+++++..    ...++|++|
T Consensus         1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~-~~-----Ga---~~~~~~~~~~----~~~~i~~~~----~~~~~d~vi   63 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAK-EL-----GA---DHVIDYSDDD----FVEQIRELT----GGRGVDVVI   63 (130)
T ss_dssp             HHHHHHHHHHHHTTSEEEEEESSHHHHHHHH-HT-----TE---SEEEETTTSS----HHHHHHHHT----TTSSEEEEE
T ss_pred             ChHHHHHHHHHHcCCEEEEEECCHHHHHHHH-hh-----cc---cccccccccc----ccccccccc----ccccceEEE
Confidence            6899999999999999999999988765443 22     31   2224555444    334444432    124799999


Q ss_pred             ecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017812          150 NNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  204 (365)
Q Consensus       150 ~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~  204 (365)
                      .++|.        .+               ..+..+..+++   .|++++++...
T Consensus        64 d~~g~--------~~---------------~~~~~~~~l~~---~G~~v~vg~~~   92 (130)
T PF00107_consen   64 DCVGS--------GD---------------TLQEAIKLLRP---GGRIVVVGVYG   92 (130)
T ss_dssp             ESSSS--------HH---------------HHHHHHHHEEE---EEEEEEESSTS
T ss_pred             EecCc--------HH---------------HHHHHHHHhcc---CCEEEEEEccC
Confidence            99994        22               22233444444   58999999876

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=96.02  E-value=0.092  Score=48.26  Aligned_cols=117  Identities=15%  Similarity=0.223  Sum_probs=72.9

Q ss_pred             EEEEecCCChHHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhhcCCC-ceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           61 VCIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRNKDA-RLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G~--~Vil~~r~~~~~~~~~~~l~~~~~~~-~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .|.|+|+ |+||..+|..|+.++.  .+++++.++++.+-...++....+-. .-..+..| .+.++             
T Consensus         2 KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~-~~y~~-------------   66 (313)
T COG0039           2 KVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGD-GDYED-------------   66 (313)
T ss_pred             eEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecC-CChhh-------------
Confidence            5889999 9999999999988874  89999999777666666664432111 11122222 22221             


Q ss_pred             ccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017812          138 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  204 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~  204 (365)
                          ...-|++|-.||+.... .++.+   +.+..|..    +.+.+.+.+.+....+.++.+|-..
T Consensus        67 ----~~~aDiVvitAG~prKp-GmtR~---DLl~~Na~----I~~~i~~~i~~~~~d~ivlVvtNPv  121 (313)
T COG0039          67 ----LKGADIVVITAGVPRKP-GMTRL---DLLEKNAK----IVKDIAKAIAKYAPDAIVLVVTNPV  121 (313)
T ss_pred             ----hcCCCEEEEeCCCCCCC-CCCHH---HHHHhhHH----HHHHHHHHHHhhCCCeEEEEecCcH
Confidence                24589999999986432 23332   34555654    4444555555544357777777644

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=96.01  E-value=0.049  Score=51.80  Aligned_cols=79  Identities=9%  Similarity=0.109  Sum_probs=52.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCC-hhhHHHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSS-FQSVLKFKDSLQQW  135 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~-~~~v~~~~~~~~~~  135 (365)
                      .|.+|+|+|+ |+||...+......|+ +|+.+++++++++.+ +++     +..   ...|..+ .+++.+.+.++.  
T Consensus       185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a-~~~-----Ga~---~~i~~~~~~~~~~~~v~~~~--  252 (368)
T TIGR02818       185 EGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELA-KKL-----GAT---DCVNPNDYDKPIQEVIVEIT--  252 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHh-----CCC---eEEcccccchhHHHHHHHHh--
Confidence            4789999986 8999999988888898 799999998876655 333     322   1223332 122222222221  


Q ss_pred             HhccCCCCCeeEEEecCCc
Q 017812          136 LLDSDMHSSIQLLINNAGI  154 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~  154 (365)
                            .+.+|++|.++|.
T Consensus       253 ------~~g~d~vid~~G~  265 (368)
T TIGR02818       253 ------DGGVDYSFECIGN  265 (368)
T ss_pred             ------CCCCCEEEECCCC
Confidence                  2369999999984

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=96.00  E-value=0.1  Score=49.43  Aligned_cols=44  Identities=25%  Similarity=0.243  Sum_probs=35.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMAD  102 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~  102 (365)
                      .|++|+|.|+ |+||..++......|++|++++.+.++..+..++
T Consensus       183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~  226 (360)
T PLN02586        183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINR  226 (360)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHh
Confidence            4789999775 8999999998888999999888877655444444

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=95.95  E-value=0.11  Score=48.73  Aligned_cols=40  Identities=23%  Similarity=0.215  Sum_probs=33.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCE-EEEEecCchhHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFH-VVLVGRSSHLLSE   98 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~-Vil~~r~~~~~~~   98 (365)
                      .|++++|+|+ +++|..++..+...|++ |+.+++++++.+.
T Consensus       160 ~g~~vlV~G~-g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~  200 (347)
T PRK10309        160 EGKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDINSEKLAL  200 (347)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHH
Confidence            4789999975 99999999988899996 7888888877654

>PRK07411 hypothetical protein; Validated

Probab=95.93  E-value=0.051  Score=52.06  Aligned_cols=65  Identities=20%  Similarity=0.327  Sum_probs=53.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecC-------------------chhHHHHHHHHHhhcCCCceEEE
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRS-------------------SHLLSETMADITSRNKDARLEAF  115 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~  115 (365)
                      .++..+|+|.|+ ||+|.++|+.|+..|. ++++++.+                   ..|.+.+.+.+.+.+|..++..+
T Consensus        35 ~L~~~~VlivG~-GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~v~~~  113 (390)
T PRK07411         35 RLKAASVLCIGT-GGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQVDLY  113 (390)
T ss_pred             HHhcCcEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCeEEEE
Confidence            467889999987 5799999999999997 89998874                   23677778888888888888888


Q ss_pred             EecCCC
Q 017812          116 QVDLSS  121 (365)
Q Consensus       116 ~~Dls~  121 (365)
                      ...++.
T Consensus       114 ~~~~~~  119 (390)
T PRK07411        114 ETRLSS  119 (390)
T ss_pred             ecccCH
Confidence            777665

>cd01488 Uba3_RUB Ubiquitin activating enzyme (E1) subunit UBA3

Probab=95.92  E-value=0.048  Score=49.77  Aligned_cols=60  Identities=15%  Similarity=0.224  Sum_probs=48.3

Q ss_pred             EEEecCCChHHHHHHHHHHHCCC-EEEEEecC-------------------chhHHHHHHHHHhhcCCCceEEEEecCCC
Q 017812           62 CIVTGATSGLGAAAAYALSREGF-HVVLVGRS-------------------SHLLSETMADITSRNKDARLEAFQVDLSS  121 (365)
Q Consensus        62 vlITGassGIG~~~a~~la~~G~-~Vil~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~~Dls~  121 (365)
                      |+|.| .||+|.++++.|+..|. ++.++|.+                   ..+++.+.+.+.+.+|+.++..+..++.+
T Consensus         2 VlVVG-aGGlG~eilknLal~Gvg~I~IvD~D~Ve~SNLnRQfLf~~~dIGk~KAevaa~~l~~~np~v~I~~~~~~i~~   80 (291)
T cd01488           2 ILVIG-AGGLGCELLKNLALSGFRNIHVIDMDTIDVSNLNRQFLFREKDIGKPKAEVAAKFVNDRVPGVNVTPHFGKIQD   80 (291)
T ss_pred             EEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCEecccccCcCcccChHHcchHHHHHHHHHHHHHCCCCEEEEEecccCc
Confidence            67777 57899999999999997 89898763                   24667777788888888888888888875


Q ss_pred             h
Q 017812          122 F  122 (365)
Q Consensus       122 ~  122 (365)
                      .
T Consensus        81 ~   81 (291)
T cd01488          81 K   81 (291)
T ss_pred             h
Confidence            3

UBA3 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins. consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. UBA3 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>PRK14851 hypothetical protein; Provisional

Probab=95.90  E-value=0.053  Score=55.47  Aligned_cols=82  Identities=13%  Similarity=0.268  Sum_probs=62.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecC-------------------chhHHHHHHHHHhhcCCCceEEE
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRS-------------------SHLLSETMADITSRNKDARLEAF  115 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~  115 (365)
                      .+++.+|+|.|+ ||+|..++..|+..|. ++++++.+                   ..|.+.+.+.+.+.+|..++..+
T Consensus        40 kL~~~~VlIvG~-GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~I~~~  118 (679)
T PRK14851         40 RLAEAKVAIPGM-GGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLEITPF  118 (679)
T ss_pred             HHhcCeEEEECc-CHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCeEEEE
Confidence            367899999995 6899999999999997 89898863                   23666677778888888888888


Q ss_pred             EecCCChhhHHHHHHHHHHHHhccCCCCCeeEEEecC
Q 017812          116 QVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNA  152 (365)
Q Consensus       116 ~~Dls~~~~v~~~~~~~~~~~~~~~~~~~id~lv~nA  152 (365)
                      ...++. +++..+++             .+|++|.+.
T Consensus       119 ~~~i~~-~n~~~~l~-------------~~DvVid~~  141 (679)
T PRK14851        119 PAGINA-DNMDAFLD-------------GVDVVLDGL  141 (679)
T ss_pred             ecCCCh-HHHHHHHh-------------CCCEEEECC
Confidence            888864 34444432             378877554

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=95.89  E-value=0.13  Score=47.67  Aligned_cols=42  Identities=14%  Similarity=0.101  Sum_probs=36.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSET   99 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~   99 (365)
                      .|.+++|.||++.+|..++......|++|+.++++.++.+.+
T Consensus       140 ~g~~vlI~g~~g~ig~~~~~lak~~G~~v~~~~~~~~~~~~~  181 (327)
T PRK10754        140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQRA  181 (327)
T ss_pred             CCCEEEEEeCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            478999999999999999988889999999999887765443

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=95.89  E-value=0.12  Score=48.54  Aligned_cols=79  Identities=15%  Similarity=0.244  Sum_probs=52.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      .|++++|+|+ +++|..++..+...|+ +|++++++.++.+.+ .++     +..   ...|..+.+    +.+++.+..
T Consensus       172 ~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~-~~~-----ga~---~~i~~~~~~----~~~~l~~~~  237 (351)
T cd08233         172 PGDTALVLGA-GPIGLLTILALKAAGASKIIVSEPSEARRELA-EEL-----GAT---IVLDPTEVD----VVAEVRKLT  237 (351)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHh-----CCC---EEECCCccC----HHHHHHHHh
Confidence            4789999985 8999999999999999 899998888776544 222     222   123444333    222333321


Q ss_pred             hccCCCCCeeEEEecCCc
Q 017812          137 LDSDMHSSIQLLINNAGI  154 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~  154 (365)
                          ..+++|+++.+.|.
T Consensus       238 ----~~~~~d~vid~~g~  251 (351)
T cd08233         238 ----GGGGVDVSFDCAGV  251 (351)
T ss_pred             ----CCCCCCEEEECCCC
Confidence                12359999999884

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>COG2263 Predicted RNA methylase [Translation, ribosomal structure and biogenesis]

Probab=95.88  E-value=0.15  Score=42.94  Aligned_cols=77  Identities=19%  Similarity=0.203  Sum_probs=61.5

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHH
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  133 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~  133 (365)
                      .+++|++|+=-||..|+   ++...+-.|+ +|+.++.+++.++-+.+...+.  ..++.++.+|+++..          
T Consensus        42 g~l~g~~V~DlG~GTG~---La~ga~~lGa~~V~~vdiD~~a~ei~r~N~~~l--~g~v~f~~~dv~~~~----------  106 (198)
T COG2263          42 GDLEGKTVLDLGAGTGI---LAIGAALLGASRVLAVDIDPEALEIARANAEEL--LGDVEFVVADVSDFR----------  106 (198)
T ss_pred             CCcCCCEEEEcCCCcCH---HHHHHHhcCCcEEEEEecCHHHHHHHHHHHHhh--CCceEEEEcchhhcC----------
Confidence            36899999999998776   3444555785 8999999999998888887773  678999999998743          


Q ss_pred             HHHhccCCCCCeeEEEecCCcc
Q 017812          134 QWLLDSDMHSSIQLLINNAGIL  155 (365)
Q Consensus       134 ~~~~~~~~~~~id~lv~nAG~~  155 (365)
                               ++.|.+|.|.-..
T Consensus       107 ---------~~~dtvimNPPFG  119 (198)
T COG2263         107 ---------GKFDTVIMNPPFG  119 (198)
T ss_pred             ---------CccceEEECCCCc
Confidence                     6788899888654

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=95.86  E-value=0.056  Score=51.32  Aligned_cols=79  Identities=10%  Similarity=0.152  Sum_probs=53.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChh-hHHHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQ-SVLKFKDSLQQW  135 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~-~v~~~~~~~~~~  135 (365)
                      .|.+|+|.|+ ++||...+..+...|+ +|+.+++++++.+.+ +++     +.. +  ..|..+.+ ++.+.+.++.  
T Consensus       186 ~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~-~~l-----Ga~-~--~i~~~~~~~~~~~~v~~~~--  253 (368)
T cd08300         186 PGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELA-KKF-----GAT-D--CVNPKDHDKPIQQVLVEMT--  253 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHc-----CCC-E--EEcccccchHHHHHHHHHh--
Confidence            4789999985 8999999999989999 799999998877644 333     222 1  23433322 3333333322  


Q ss_pred             HhccCCCCCeeEEEecCCc
Q 017812          136 LLDSDMHSSIQLLINNAGI  154 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~  154 (365)
                            .+++|+++.+.|.
T Consensus       254 ------~~g~d~vid~~g~  266 (368)
T cd08300         254 ------DGGVDYTFECIGN  266 (368)
T ss_pred             ------CCCCcEEEECCCC
Confidence                  2469999998884

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=95.85  E-value=0.028  Score=45.49  Aligned_cols=43  Identities=21%  Similarity=0.258  Sum_probs=37.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSE   98 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~   98 (365)
                      +++||.++|-|.|.-+|+.++..|.++|++|.++.++...+++
T Consensus        25 ~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l~~   67 (140)
T cd05212          25 RLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQLQS   67 (140)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCHHH
Confidence            5789999999999999999999999999999999876544433

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=95.85  E-value=0.17  Score=47.47  Aligned_cols=35  Identities=23%  Similarity=0.311  Sum_probs=31.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecC
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRS   92 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~   92 (365)
                      .|.+++|+|+++++|.+++......|++|+.+.++
T Consensus       162 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~  196 (350)
T cd08248         162 AGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST  196 (350)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc
Confidence            48999999999999999999999999999888865

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PLN00203 glutamyl-tRNA reductase

Probab=95.83  E-value=0.044  Score=54.27  Aligned_cols=46  Identities=22%  Similarity=0.314  Sum_probs=41.2

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADI  103 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l  103 (365)
                      +.+++++|.|+ |++|..+++.|...|+ +|+++.|+.++++++.+++
T Consensus       264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~  310 (519)
T PLN00203        264 HASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEF  310 (519)
T ss_pred             CCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHh
Confidence            77899999999 9999999999999997 7999999998887766654

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=95.81  E-value=0.07  Score=52.21  Aligned_cols=77  Identities=16%  Similarity=0.179  Sum_probs=58.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      ..+.++|.|+ |.+|+.+++.|.+.|.+|+++++++++.++..++.      ..+.++..|.++.+.+.+.         
T Consensus       230 ~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~------~~~~~i~gd~~~~~~L~~~---------  293 (453)
T PRK09496        230 PVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEEL------PNTLVLHGDGTDQELLEEE---------  293 (453)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHC------CCCeEEECCCCCHHHHHhc---------
Confidence            4688999999 88999999999999999999999988766554431      2456788999988765443         


Q ss_pred             ccCCCCCeeEEEecCC
Q 017812          138 DSDMHSSIQLLINNAG  153 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG  153 (365)
                         .....|.+|...+
T Consensus       294 ---~~~~a~~vi~~~~  306 (453)
T PRK09496        294 ---GIDEADAFIALTN  306 (453)
T ss_pred             ---CCccCCEEEECCC
Confidence               2245677775443

>cd01486 Apg7 Apg7 is an E1-like protein, that activates two different ubiquitin-like proteins, Apg12 and Apg8, and assigns them to specific E2 enzymes, Apg10 and Apg3, respectively

Probab=95.80  E-value=0.045  Score=49.88  Aligned_cols=57  Identities=18%  Similarity=0.283  Sum_probs=42.5

Q ss_pred             EEEecCCChHHHHHHHHHHHCCC-EEEEEecC---------------------chhHHHHHHHHHhhcCCCceEEEEecC
Q 017812           62 CIVTGATSGLGAAAAYALSREGF-HVVLVGRS---------------------SHLLSETMADITSRNKDARLEAFQVDL  119 (365)
Q Consensus        62 vlITGassGIG~~~a~~la~~G~-~Vil~~r~---------------------~~~~~~~~~~l~~~~~~~~~~~~~~Dl  119 (365)
                      |+|.|+ ||+|.++|+.|+..|. ++++++.+                     ..|.+.+.+.+++.+|..++..+...+
T Consensus         2 VLIvGa-GGLGs~vA~~La~aGVg~ItlvD~D~Ve~sNL~RQ~L~~~~D~~iGk~Ka~aaa~~L~~iNP~v~v~~~~~~I   80 (307)
T cd01486           2 CLLLGA-GTLGCNVARNLLGWGVRHITFVDSGKVSYSNPVRQSLFTFEDCKGGKPKAEAAAERLKEIFPSIDATGIVLSI   80 (307)
T ss_pred             EEEECC-CHHHHHHHHHHHHcCCCeEEEECCCEeccccCCcccccccchhhcCccHHHHHHHHHHHHCCCcEEEEeeeec
Confidence            677776 6899999999999997 88888753                     124556667777777777777666544

This leads to the covalent conjugation of Apg8 with phosphatidylethanolamine, an important step in autophagy. Autophagy is a dynamic membrane phenomenon for bulk protein degradation in the lysosome/vacuole.

>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins

Probab=95.80  E-value=0.19  Score=46.35  Aligned_cols=115  Identities=18%  Similarity=0.246  Sum_probs=66.7

Q ss_pred             EEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcC--CCceEEEEecCCChhhHHHHHHHHHHHHhc
Q 017812           62 CIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNK--DARLEAFQVDLSSFQSVLKFKDSLQQWLLD  138 (365)
Q Consensus        62 vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~  138 (365)
                      |.|.|| |.+|..+|..|+.+|. +|++++++++.++...-++.....  ..... +.. -+|.+   .    +      
T Consensus         1 I~IIGa-G~vG~~ia~~la~~~l~eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~-I~~-t~d~~---~----l------   64 (300)
T cd01339           1 ISIIGA-GNVGATLAQLLALKELGDVVLLDIVEGLPQGKALDISQAAPILGSDTK-VTG-TNDYE---D----I------   64 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhCCCcEEEEEeCCCcHHHHHHHHHHHhhhhcCCCeE-EEE-cCCHH---H----h------
Confidence            458898 8899999999999886 999999998765433333332210  11111 111 01211   1    1      


Q ss_pred             cCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017812          139 SDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  204 (365)
Q Consensus       139 ~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~  204 (365)
                          ..-|++|.++|..... ..+.+   +.+.-|    .-+.+.+.+.+.+...++.+|++|-..
T Consensus        65 ----~dADiVIit~g~p~~~-~~~r~---e~~~~n----~~i~~~i~~~i~~~~p~~~iIv~sNP~  118 (300)
T cd01339          65 ----AGSDVVVITAGIPRKP-GMSRD---DLLGTN----AKIVKEVAENIKKYAPNAIVIVVTNPL  118 (300)
T ss_pred             ----CCCCEEEEecCCCCCc-CCCHH---HHHHHH----HHHHHHHHHHHHHHCCCeEEEEecCcH
Confidence                3479999999975332 22221   222333    455666666666654456777777544

Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=95.77  E-value=0.1  Score=48.94  Aligned_cols=36  Identities=31%  Similarity=0.452  Sum_probs=32.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCc
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS   93 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~   93 (365)
                      .|.+++|.|+++++|.+++......|++|+.++++.
T Consensus       177 ~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~  212 (350)
T cd08274         177 AGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAA  212 (350)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCch
Confidence            478999999999999999999999999999888654

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=95.74  E-value=0.17  Score=48.25  Aligned_cols=44  Identities=27%  Similarity=0.267  Sum_probs=34.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMAD  102 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~  102 (365)
                      .|++++|.|+ |++|..++......|++|++++++.++..+..++
T Consensus       178 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~  221 (375)
T PLN02178        178 SGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDR  221 (375)
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHh
Confidence            4789999986 8999999998889999999998876553333333

>PRK07877 hypothetical protein; Provisional

Probab=95.73  E-value=0.05  Score=55.88  Aligned_cols=81  Identities=22%  Similarity=0.257  Sum_probs=62.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCC--EEEEEecC------------------chhHHHHHHHHHhhcCCCceEEE
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGF--HVVLVGRS------------------SHLLSETMADITSRNKDARLEAF  115 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~--~Vil~~r~------------------~~~~~~~~~~l~~~~~~~~~~~~  115 (365)
                      .+++.+|+|.|+ | +|..+|..|+..|.  ++++++.+                  ..|.+.+++.+.+.++..++..+
T Consensus       104 ~L~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~~~  181 (722)
T PRK07877        104 RLGRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVEVF  181 (722)
T ss_pred             HHhcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEEEE
Confidence            367889999999 4 99999999999993  89999874                  24667777888888888888888


Q ss_pred             EecCCChhhHHHHHHHHHHHHhccCCCCCeeEEEecC
Q 017812          116 QVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNA  152 (365)
Q Consensus       116 ~~Dls~~~~v~~~~~~~~~~~~~~~~~~~id~lv~nA  152 (365)
                      ...++ .+++.++++             .+|++|.+.
T Consensus       182 ~~~i~-~~n~~~~l~-------------~~DlVvD~~  204 (722)
T PRK07877        182 TDGLT-EDNVDAFLD-------------GLDVVVEEC  204 (722)
T ss_pred             eccCC-HHHHHHHhc-------------CCCEEEECC
Confidence            88887 345555432             367777665

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=95.72  E-value=0.084  Score=51.01  Aligned_cols=44  Identities=11%  Similarity=0.072  Sum_probs=35.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCC---EEEEEecCchhHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGF---HVVLVGRSSHLLSETMA  101 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~---~Vil~~r~~~~~~~~~~  101 (365)
                      .|.+|+|.||+|++|...+..+...|+   +|+++++++++++.+.+
T Consensus       175 ~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~  221 (410)
T cd08238         175 PGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQR  221 (410)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHH
Confidence            478999999999999998776666553   79999999988776544

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.72  E-value=0.28  Score=48.44  Aligned_cols=76  Identities=20%  Similarity=0.115  Sum_probs=51.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCch-hHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH-LLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      +++++.|+|.|+ |++|.++|+.|+++|++|++++++.. ......+.+++.  +  +.++..+-..          .  
T Consensus        13 ~~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~--g--v~~~~~~~~~----------~--   75 (480)
T PRK01438         13 DWQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEAL--G--ATVRLGPGPT----------L--   75 (480)
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHc--C--CEEEECCCcc----------c--
Confidence            467889999997 77999999999999999999986643 333444455443  2  3333322111          0  


Q ss_pred             HHhccCCCCCeeEEEecCCcc
Q 017812          135 WLLDSDMHSSIQLLINNAGIL  155 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~  155 (365)
                             ....|.+|...|+.
T Consensus        76 -------~~~~D~Vv~s~Gi~   89 (480)
T PRK01438         76 -------PEDTDLVVTSPGWR   89 (480)
T ss_pred             -------cCCCCEEEECCCcC
Confidence                   02479999999985

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=95.69  E-value=0.43  Score=44.20  Aligned_cols=115  Identities=17%  Similarity=0.224  Sum_probs=70.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHCC--CEEEEEecCchhHHHHHHHHHhhcC-CCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           61 VCIVTGATSGLGAAAAYALSREG--FHVVLVGRSSHLLSETMADITSRNK-DARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G--~~Vil~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .+.|.|+ |.+|..+|..|+.+|  .+|+++++++++.+....++....+ ........   .+.+.       +     
T Consensus         2 kI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~---~d~~~-------l-----   65 (308)
T cd05292           2 KVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYA---GDYAD-------C-----   65 (308)
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEee---CCHHH-------h-----
Confidence            3788898 889999999999999  5899999999887755555543311 01111111   12111       1     


Q ss_pred             ccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017812          138 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  204 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~  204 (365)
                           ...|++|..+|..... ..+   ..+.+..|.    .+.+.+.+.+.+....|.+++++...
T Consensus        66 -----~~aDiViita~~~~~~-~~~---r~dl~~~n~----~i~~~~~~~l~~~~~~giiiv~tNP~  119 (308)
T cd05292          66 -----KGADVVVITAGANQKP-GET---RLDLLKRNV----AIFKEIIPQILKYAPDAILLVVTNPV  119 (308)
T ss_pred             -----CCCCEEEEccCCCCCC-CCC---HHHHHHHHH----HHHHHHHHHHHHHCCCeEEEEecCcH
Confidence                 3589999999975321 222   223344443    45555555555554467888886533

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=95.68  E-value=0.075  Score=50.97  Aligned_cols=64  Identities=20%  Similarity=0.272  Sum_probs=50.7

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecC-------------------chhHHHHHHHHHhhcCCCceEEEE
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRS-------------------SHLLSETMADITSRNKDARLEAFQ  116 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~  116 (365)
                      +++.+|+|.|+ ||+|.++|+.|+..|. ++++++.+                   ..|.+.+.+.+.+.+|..++..+.
T Consensus        40 L~~~~VlviG~-GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~~~~  118 (392)
T PRK07878         40 LKNARVLVIGA-GGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVRLHE  118 (392)
T ss_pred             HhcCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEEEEe
Confidence            56788999987 5799999999999997 89998864                   235666777788888877777777


Q ss_pred             ecCCC
Q 017812          117 VDLSS  121 (365)
Q Consensus       117 ~Dls~  121 (365)
                      .+++.
T Consensus       119 ~~i~~  123 (392)
T PRK07878        119 FRLDP  123 (392)
T ss_pred             ccCCh
Confidence            66654

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=95.67  E-value=0.11  Score=46.97  Aligned_cols=105  Identities=13%  Similarity=0.100  Sum_probs=72.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHH-CCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSR-EGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~-~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      +|+|++|.||+|..|. ++-+||+ .|++|+..+-+.++..-+.+++    +-..    ..|--++.++.+++.+.    
T Consensus       153 ~geTv~VSaAsGAvGq-l~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~----G~d~----afNYK~e~~~~~aL~r~----  219 (343)
T KOG1196|consen  153 KGETVFVSAASGAVGQ-LVGQFAKLMGCYVVGSAGSKEKVDLLKTKF----GFDD----AFNYKEESDLSAALKRC----  219 (343)
T ss_pred             CCCEEEEeeccchhHH-HHHHHHHhcCCEEEEecCChhhhhhhHhcc----CCcc----ceeccCccCHHHHHHHh----
Confidence            5899999999999995 5556665 5999999999988765554443    1111    12333343454544442    


Q ss_pred             hccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccc
Q 017812          137 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHR  206 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~  206 (365)
                          -...||+.+-|.|-                        .+..+++..|..   .|||+..+-++.+
T Consensus       220 ----~P~GIDiYfeNVGG------------------------~~lDavl~nM~~---~gri~~CG~ISqY  258 (343)
T KOG1196|consen  220 ----FPEGIDIYFENVGG------------------------KMLDAVLLNMNL---HGRIAVCGMISQY  258 (343)
T ss_pred             ----CCCcceEEEeccCc------------------------HHHHHHHHhhhh---ccceEeeeeehhc
Confidence                23579999999996                        456667777776   5899998877765

>COG4123 Predicted O-methyltransferase [General function prediction only]

Probab=95.67  E-value=0.041  Score=48.75  Aligned_cols=124  Identities=18%  Similarity=0.220  Sum_probs=80.9

Q ss_pred             CCEEEEecC-CChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           59 RPVCIVTGA-TSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        59 ~k~vlITGa-ssGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .+.++=-|+ +|.+|..+|.+..+  ++|+++.+.++..+.+.+.++...-..++.+++.|+.+.....           
T Consensus        45 ~~~IlDlGaG~G~l~L~la~r~~~--a~I~~VEiq~~~a~~A~~nv~ln~l~~ri~v~~~Di~~~~~~~-----------  111 (248)
T COG4123          45 KGRILDLGAGNGALGLLLAQRTEK--AKIVGVEIQEEAAEMAQRNVALNPLEERIQVIEADIKEFLKAL-----------  111 (248)
T ss_pred             CCeEEEecCCcCHHHHHHhccCCC--CcEEEEEeCHHHHHHHHHHHHhCcchhceeEehhhHHHhhhcc-----------
Confidence            455666665 47777777766554  8999999999998888888877666789999999887643221           


Q ss_pred             ccCCCCCeeEEEecCCcccCCCCCCHHHHhH----hHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017812          138 DSDMHSSIQLLINNAGILATSSRLTPEGYDQ----MMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  204 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~----~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~  204 (365)
                         ....+|++|+|.-........+++....    +...|+-..+..+.   ..+ +.  .|++.+|....
T Consensus       112 ---~~~~fD~Ii~NPPyf~~~~~~~~~~~~~~Ar~e~~~~le~~i~~a~---~~l-k~--~G~l~~V~r~e  173 (248)
T COG4123         112 ---VFASFDLIICNPPYFKQGSRLNENPLRAIARHEITLDLEDLIRAAA---KLL-KP--GGRLAFVHRPE  173 (248)
T ss_pred             ---cccccCEEEeCCCCCCCccccCcChhhhhhhhhhcCCHHHHHHHHH---HHc-cC--CCEEEEEecHH
Confidence               2346999999998875444433333332    33334444333333   333 33  48988887643

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=95.67  E-value=0.035  Score=47.09  Aligned_cols=44  Identities=30%  Similarity=0.421  Sum_probs=37.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHh
Q 017812           61 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITS  105 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~  105 (365)
                      +|.|.|| |-+|..+|..++..|++|++.+++++.+++..+.+..
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~~   44 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRIER   44 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHHH
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHHH
Confidence            4678888 8899999999999999999999999988887777655

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=95.64  E-value=0.096  Score=41.46  Aligned_cols=76  Identities=24%  Similarity=0.354  Sum_probs=54.2

Q ss_pred             EEEEecCCChHHHHHHHHHHH-CCCEEEE-EecCc----------------------hhHHHHHHHHHhhcCCCceEEEE
Q 017812           61 VCIVTGATSGLGAAAAYALSR-EGFHVVL-VGRSS----------------------HLLSETMADITSRNKDARLEAFQ  116 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~-~G~~Vil-~~r~~----------------------~~~~~~~~~l~~~~~~~~~~~~~  116 (365)
                      .|+|.|++|-+|+++++.+.+ .|.+++. ++|+.                      +.++++.++          .=+.
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~----------~DVv   71 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEE----------ADVV   71 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH-----------SEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhccc----------CCEE
Confidence            489999999999999999999 6777664 46665                      222222222          1167


Q ss_pred             ecCCChhhHHHHHHHHHHHHhccCCCCCeeEEEecCCc
Q 017812          117 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI  154 (365)
Q Consensus       117 ~Dls~~~~v~~~~~~~~~~~~~~~~~~~id~lv~nAG~  154 (365)
                      +|+|.++.+...++.+.+        .++.+++-..|.
T Consensus        72 IDfT~p~~~~~~~~~~~~--------~g~~~ViGTTG~  101 (124)
T PF01113_consen   72 IDFTNPDAVYDNLEYALK--------HGVPLVIGTTGF  101 (124)
T ss_dssp             EEES-HHHHHHHHHHHHH--------HT-EEEEE-SSS
T ss_pred             EEcCChHHhHHHHHHHHh--------CCCCEEEECCCC
Confidence            899999999998888876        368899988886

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=95.64  E-value=0.24  Score=47.13  Aligned_cols=117  Identities=9%  Similarity=0.063  Sum_probs=73.6

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCC-E----EEE----EecCchhHHHHHHHHHhhc-CC-CceEEEEecCCChhhHHHH
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGF-H----VVL----VGRSSHLLSETMADITSRN-KD-ARLEAFQVDLSSFQSVLKF  128 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~-~----Vil----~~r~~~~~~~~~~~l~~~~-~~-~~~~~~~~Dls~~~~v~~~  128 (365)
                      -.|.|+||+|.+|..+|..|+..|. .    |.+    +++++++++...-++.... +- .++++. .  .+.+.    
T Consensus        45 ~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~-~--~~y~~----  117 (387)
T TIGR01757        45 VNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIG-I--DPYEV----  117 (387)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEe-c--CCHHH----
Confidence            3699999999999999999999884 4    444    4889998888887776543 11 122111 1  12111    


Q ss_pred             HHHHHHHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhc-CCCCCeEEEEcCCc
Q 017812          129 KDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKN-SPVPSRIVNVTSFT  204 (365)
Q Consensus       129 ~~~~~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~-~~~~g~iV~vsS~~  204 (365)
                                   ...-|++|..||.... +..+.   .+.+..|.    .+.+.+.+.+.+ .+..++||++|-..
T Consensus       118 -------------~kdaDIVVitAG~prk-pg~tR---~dll~~N~----~I~k~i~~~I~~~a~~~~iviVVsNPv  173 (387)
T TIGR01757       118 -------------FEDADWALLIGAKPRG-PGMER---ADLLDING----QIFADQGKALNAVASKNCKVLVVGNPC  173 (387)
T ss_pred             -------------hCCCCEEEECCCCCCC-CCCCH---HHHHHHHH----HHHHHHHHHHHHhCCCCeEEEEcCCcH
Confidence                         2458999999998532 22222   23455554    455566666655 32367888887543

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1

Probab=95.58  E-value=0.087  Score=48.02  Aligned_cols=62  Identities=18%  Similarity=0.230  Sum_probs=49.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecC-------------------chhHHHHHHHHHhhcCCCceEEE
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRS-------------------SHLLSETMADITSRNKDARLEAF  115 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~  115 (365)
                      .+++.+|+|.|+ +|+|.++|+.|+..|. +|.+++.+                   ..+.+.+.+.+++.+|..++..+
T Consensus        16 kL~~s~VLIvG~-gGLG~EiaKnLalaGVg~itI~D~d~ve~snL~rqf~~~~~dIGk~Kaea~~~~L~eLNp~V~V~~~   94 (286)
T cd01491          16 KLQKSNVLISGL-GGLGVEIAKNLILAGVKSVTLHDTKPCSWSDLSSQFYLREEDIGKNRAEASQARLAELNPYVPVTVS   94 (286)
T ss_pred             HHhcCcEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCccchhhcccCccCChHHhCHHHHHHHHHHHHHHCCCCEEEEE
Confidence            366788999987 5799999999999997 78888764                   24567777788888887777777


Q ss_pred             Eec
Q 017812          116 QVD  118 (365)
Q Consensus       116 ~~D  118 (365)
                      ..+
T Consensus        95 ~~~   97 (286)
T cd01491          95 TGP   97 (286)
T ss_pred             ecc
Confidence            655

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1.

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=95.57  E-value=0.23  Score=47.14  Aligned_cols=41  Identities=15%  Similarity=0.192  Sum_probs=34.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSET   99 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~   99 (365)
                      .|.+++|.|+ +++|..++......|+ +|+.++++.++.+.+
T Consensus       184 ~g~~vlV~G~-g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~  225 (365)
T cd08277         184 PGSTVAVFGL-GAVGLSAIMGAKIAGASRIIGVDINEDKFEKA  225 (365)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH
Confidence            4789999975 9999999998888898 799999988776544

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.56  E-value=0.039  Score=50.17  Aligned_cols=38  Identities=16%  Similarity=0.237  Sum_probs=35.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCc
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS   93 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~   93 (365)
                      +++||.|+|.|+|.-+|+-+|..|.++|++|+++.++.
T Consensus       155 ~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t  192 (286)
T PRK14175        155 DLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS  192 (286)
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc
Confidence            58999999999999999999999999999999988754

>PRK05442 malate dehydrogenase; Provisional

Probab=95.56  E-value=0.066  Score=49.91  Aligned_cols=116  Identities=9%  Similarity=0.057  Sum_probs=70.0

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCC-------EEEEEecCch--hHHHHHHHHHhhc-CC-CceEEEEecCCChhhHHHH
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGF-------HVVLVGRSSH--LLSETMADITSRN-KD-ARLEAFQVDLSSFQSVLKF  128 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~-------~Vil~~r~~~--~~~~~~~~l~~~~-~~-~~~~~~~~Dls~~~~v~~~  128 (365)
                      +.|.|+||+|.+|..+|..|+..|.       .+++++.++.  +++....++.... +. ..+.+ ..  .+.+     
T Consensus         5 ~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i-~~--~~y~-----   76 (326)
T PRK05442          5 VRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVI-TD--DPNV-----   76 (326)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEE-ec--ChHH-----
Confidence            4699999999999999999998774       6999999543  3444444443321 10 11111 10  1111     


Q ss_pred             HHHHHHHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCC-CCCeEEEEcCC
Q 017812          129 KDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP-VPSRIVNVTSF  203 (365)
Q Consensus       129 ~~~~~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~-~~g~iV~vsS~  203 (365)
                                  ....-|++|..||..... ..+.   .+.+..|.    .+.+.+.+.+.+.. ..+.++++|-.
T Consensus        77 ------------~~~daDiVVitaG~~~k~-g~tR---~dll~~Na----~i~~~i~~~i~~~~~~~~iiivvsNP  132 (326)
T PRK05442         77 ------------AFKDADVALLVGARPRGP-GMER---KDLLEANG----AIFTAQGKALNEVAARDVKVLVVGNP  132 (326)
T ss_pred             ------------HhCCCCEEEEeCCCCCCC-CCcH---HHHHHHHH----HHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence                        124589999999985322 2222   33455554    45666666666622 35788888753

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=95.51  E-value=0.096  Score=48.98  Aligned_cols=42  Identities=19%  Similarity=0.289  Sum_probs=37.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSET   99 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~   99 (365)
                      .+.+++|.|+++++|.+++..+...|++|+.+.+++++.+.+
T Consensus       165 ~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~  206 (341)
T cd08297         165 PGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELA  206 (341)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHH
Confidence            478999999999999999999999999999999998765544

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=95.42  E-value=0.041  Score=49.92  Aligned_cols=44  Identities=25%  Similarity=0.299  Sum_probs=38.0

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHH
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADI  103 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l  103 (365)
                      ++.++|-|+ ||-+++++..|++.|+ +|+++.|+.++.+++.+.+
T Consensus       122 ~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~  166 (272)
T PRK12550        122 DLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELY  166 (272)
T ss_pred             CCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHh
Confidence            468999996 8999999999999998 6999999998887766554

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=95.37  E-value=0.066  Score=57.06  Aligned_cols=77  Identities=25%  Similarity=0.281  Sum_probs=60.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCC-CE-------------EEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREG-FH-------------VVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQ  123 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G-~~-------------Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~  123 (365)
                      +.|.|+|.|| |.||+..|+.|++.. +.             |++++++.++++++.+..      .++..+++|++|.+
T Consensus       568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~------~~~~~v~lDv~D~e  640 (1042)
T PLN02819        568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGI------ENAEAVQLDVSDSE  640 (1042)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhc------CCCceEEeecCCHH
Confidence            4678999997 889999999999864 33             888999988777665543      24678999999988


Q ss_pred             hHHHHHHHHHHHHhccCCCCCeeEEEecCCc
Q 017812          124 SVLKFKDSLQQWLLDSDMHSSIQLLINNAGI  154 (365)
Q Consensus       124 ~v~~~~~~~~~~~~~~~~~~~id~lv~nAG~  154 (365)
                      ++.++++             .+|+||++...
T Consensus       641 ~L~~~v~-------------~~DaVIsalP~  658 (1042)
T PLN02819        641 SLLKYVS-------------QVDVVISLLPA  658 (1042)
T ss_pred             HHHHhhc-------------CCCEEEECCCc
Confidence            7766543             38999998874

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=95.37  E-value=0.11  Score=49.27  Aligned_cols=79  Identities=13%  Similarity=0.157  Sum_probs=51.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCCh-hhHHHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF-QSVLKFKDSLQQW  135 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~-~~v~~~~~~~~~~  135 (365)
                      .|.+|+|.|+ +++|...+..+...|+ +|+.++++.++.+.+ +++     +..   ...|..+. +++.+.+.++.  
T Consensus       187 ~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~-~~~-----Ga~---~~i~~~~~~~~~~~~v~~~~--  254 (369)
T cd08301         187 KGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQA-KKF-----GVT---EFVNPKDHDKPVQEVIAEMT--  254 (369)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHc-----CCc---eEEcccccchhHHHHHHHHh--
Confidence            4789999986 8999999988888998 899999998876544 233     221   11233221 22333333222  


Q ss_pred             HhccCCCCCeeEEEecCCc
Q 017812          136 LLDSDMHSSIQLLINNAGI  154 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~  154 (365)
                            .+.+|+++.+.|.
T Consensus       255 ------~~~~d~vid~~G~  267 (369)
T cd08301         255 ------GGGVDYSFECTGN  267 (369)
T ss_pred             ------CCCCCEEEECCCC
Confidence                  1369999998874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>PRK14967 putative methyltransferase; Provisional

Probab=95.36  E-value=0.5  Score=41.47  Aligned_cols=75  Identities=13%  Similarity=0.086  Sum_probs=52.0

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      +..+|-.|+++|.   ++..+++.|+ +|+.++.+++.++.+.+.+...  +.++.++..|+.+.      .        
T Consensus        37 ~~~vLDlGcG~G~---~~~~la~~~~~~v~~vD~s~~~l~~a~~n~~~~--~~~~~~~~~d~~~~------~--------   97 (223)
T PRK14967         37 GRRVLDLCTGSGA---LAVAAAAAGAGSVTAVDISRRAVRSARLNALLA--GVDVDVRRGDWARA------V--------   97 (223)
T ss_pred             CCeEEEecCCHHH---HHHHHHHcCCCeEEEEECCHHHHHHHHHHHHHh--CCeeEEEECchhhh------c--------
Confidence            5689999987755   3455666676 9999999998887777666544  33566666666431      1        


Q ss_pred             ccCCCCCeeEEEecCCcc
Q 017812          138 DSDMHSSIQLLINNAGIL  155 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~  155 (365)
                         ..+..|++|.|....
T Consensus        98 ---~~~~fD~Vi~npPy~  112 (223)
T PRK14967         98 ---EFRPFDVVVSNPPYV  112 (223)
T ss_pred             ---cCCCeeEEEECCCCC
Confidence               125699999998653

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=95.36  E-value=0.31  Score=45.49  Aligned_cols=41  Identities=27%  Similarity=0.371  Sum_probs=35.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSET   99 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~   99 (365)
                      .+++++|.| ++++|.+++..+...|++|+.+++++++.+.+
T Consensus       163 ~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~  203 (333)
T cd08296         163 PGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISRGSDKADLA  203 (333)
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Confidence            478999999 79999999999999999999999988775544

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>PRK14852 hypothetical protein; Provisional

Probab=95.34  E-value=0.098  Score=55.04  Aligned_cols=71  Identities=18%  Similarity=0.271  Sum_probs=55.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecC-------------------chhHHHHHHHHHhhcCCCceEEE
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRS-------------------SHLLSETMADITSRNKDARLEAF  115 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~  115 (365)
                      .+++.+|+|.|+ ||+|..+++.|+..|. ++.+++.+                   ..|.+.+.+.+.+.+|..++..+
T Consensus       329 kL~~srVlVvGl-GGlGs~ia~~LAraGVG~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~INP~v~I~~~  407 (989)
T PRK14852        329 RLLRSRVAIAGL-GGVGGIHLMTLARTGIGNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVNPFLDIRSF  407 (989)
T ss_pred             HHhcCcEEEECC-cHHHHHHHHHHHHcCCCeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHCCCCeEEEE
Confidence            467889999995 6899999999999997 88888763                   24667777888888888888888


Q ss_pred             EecCCChhhHHHH
Q 017812          116 QVDLSSFQSVLKF  128 (365)
Q Consensus       116 ~~Dls~~~~v~~~  128 (365)
                      ...++. +.+.++
T Consensus       408 ~~~I~~-en~~~f  419 (989)
T PRK14852        408 PEGVAA-ETIDAF  419 (989)
T ss_pred             ecCCCH-HHHHHH
Confidence            777744 444444

>PF13659 Methyltransf_26: Methyltransferase domain; PDB: 3GJY_A 3LPM_B 2NP6_D 1AQI_B 2ADM_B 2IH2_A 2JG3_A 2IBS_D 2NP7_A 2IBT_A

Probab=95.33  E-value=0.14  Score=39.55  Aligned_cols=114  Identities=18%  Similarity=0.137  Sum_probs=68.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCC-CEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREG-FHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G-~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      |.+|+--|+.+|.   ++..+++.| .+++.++.++..++-+...+.......++.++..|..+..      +..     
T Consensus         1 g~~vlD~~~G~G~---~~~~~~~~~~~~~~gvdi~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~------~~~-----   66 (117)
T PF13659_consen    1 GDRVLDPGCGSGT---FLLAALRRGAARVTGVDIDPEAVELARRNLPRNGLDDRVEVIVGDARDLP------EPL-----   66 (117)
T ss_dssp             TEEEEEETSTTCH---HHHHHHHHCTCEEEEEESSHHHHHHHHHHCHHCTTTTTEEEEESHHHHHH------HTC-----
T ss_pred             CCEEEEcCcchHH---HHHHHHHHCCCeEEEEEECHHHHHHHHHHHHHccCCceEEEEECchhhch------hhc-----
Confidence            3467767766554   233333445 8999999999988888777776544567889998875542      111     


Q ss_pred             ccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEc
Q 017812          138 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVT  201 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vs  201 (365)
                         ..++.|+++.|.-........ ... .+       ....+.+.+.+.++.   +|+++++.
T Consensus        67 ---~~~~~D~Iv~npP~~~~~~~~-~~~-~~-------~~~~~~~~~~~~L~~---gG~~~~~~  115 (117)
T PF13659_consen   67 ---PDGKFDLIVTNPPYGPRSGDK-AAL-RR-------LYSRFLEAAARLLKP---GGVLVFIT  115 (117)
T ss_dssp             ---TTT-EEEEEE--STTSBTT-----G-GC-------HHHHHHHHHHHHEEE---EEEEEEEE
T ss_pred             ---cCceeEEEEECCCCccccccc-hhh-HH-------HHHHHHHHHHHHcCC---CeEEEEEe
Confidence               347899999999775321110 111 11       333566777777765   47777764

...

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=95.32  E-value=0.062  Score=46.52  Aligned_cols=39  Identities=15%  Similarity=0.346  Sum_probs=35.0

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCc
Q 017812           54 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS   93 (365)
Q Consensus        54 ~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~   93 (365)
                      .-+++||.|+|.|| |.+|...++.|.+.|++|++++++.
T Consensus         5 ~l~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~   43 (202)
T PRK06718          5 MIDLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPEL   43 (202)
T ss_pred             EEEcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Confidence            34689999999999 7799999999999999999998764

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=95.31  E-value=0.4  Score=48.39  Aligned_cols=59  Identities=14%  Similarity=0.142  Sum_probs=47.4

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHH
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLK  127 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~  127 (365)
                      ..++|.|++ .+|+++|++|.++|.+|+++++|+++.++..+.        ...++..|.+|++..++
T Consensus       418 ~hiiI~G~G-~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~~--------g~~~i~GD~~~~~~L~~  476 (558)
T PRK10669        418 NHALLVGYG-RVGSLLGEKLLAAGIPLVVIETSRTRVDELRER--------GIRAVLGNAANEEIMQL  476 (558)
T ss_pred             CCEEEECCC-hHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHC--------CCeEEEcCCCCHHHHHh
Confidence            457777775 599999999999999999999999877665421        46789999999876655

>KOG2013 consensus SMT3/SUMO-activating complex, catalytic component UBA2 [Posttranslational modification, protein turnover, chaperones]

Probab=95.28  E-value=0.1  Score=49.92  Aligned_cols=84  Identities=19%  Similarity=0.260  Sum_probs=52.9

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      +++-.+|+.|| ||||-++-+.|+..|+ +|.+++-+.-.+..+         +-+..+-+=|+......  ++.++...
T Consensus        10 i~~~riLvVGa-GGIGCELLKnLal~gf~~IhiIDlDTIDlSNL---------NRQFLFrkkhVgqsKA~--vA~~~v~~   77 (603)
T KOG2013|consen   10 IKSGRILVVGA-GGIGCELLKNLALTGFEEIHIIDLDTIDLSNL---------NRQFLFRKKHVGQSKAT--VAAKAVKQ   77 (603)
T ss_pred             hccCeEEEEec-CcccHHHHHHHHHhcCCeeEEEeccceeccch---------hhhheeehhhcCchHHH--HHHHHHHH
Confidence            34667999988 6799999999999998 899998865433222         22334445555554432  22222221


Q ss_pred             HhccCCCCCeeEEEecCCcccC
Q 017812          136 LLDSDMHSSIQLLINNAGILAT  157 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~~  157 (365)
                           -...++++-..|.++.+
T Consensus        78 -----Fnpn~~l~~yhanI~e~   94 (603)
T KOG2013|consen   78 -----FNPNIKLVPYHANIKEP   94 (603)
T ss_pred             -----hCCCCceEeccccccCc
Confidence                 23467777777777655

>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family

Probab=95.25  E-value=0.29  Score=45.25  Aligned_cols=40  Identities=33%  Similarity=0.414  Sum_probs=35.0

Q ss_pred             CCC-EEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHH
Q 017812           58 KRP-VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLS   97 (365)
Q Consensus        58 ~~k-~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~   97 (365)
                      .|. +++|.|+++++|.+++..+...|++|+++.++.++.+
T Consensus       144 ~~~~~vlI~g~~g~vg~~~~~la~~~G~~vi~~~~~~~~~~  184 (323)
T TIGR02823       144 PEDGPVLVTGATGGVGSLAVAILSKLGYEVVASTGKAEEED  184 (323)
T ss_pred             CCCceEEEEcCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHH
Confidence            366 9999999999999999999999999998888876653

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=95.24  E-value=0.055  Score=47.44  Aligned_cols=43  Identities=23%  Similarity=0.299  Sum_probs=38.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHH
Q 017812           61 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADI  103 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l  103 (365)
                      ++.|.||+|.+|.+++..|++.|++|++.+|++++.++..++.
T Consensus         2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~~   44 (219)
T TIGR01915         2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAKA   44 (219)
T ss_pred             EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHHH
Confidence            4889999999999999999999999999999998877766544

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

Probab=95.24  E-value=0.34  Score=44.07  Aligned_cols=36  Identities=19%  Similarity=0.361  Sum_probs=33.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCc
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS   93 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~   93 (365)
                      .|++++|.|+++++|.+++..+...|++|+.+.++.
T Consensus       144 ~~~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~  179 (309)
T cd05289         144 AGQTVLIHGAAGGVGSFAVQLAKARGARVIATASAA  179 (309)
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecch
Confidence            478999999999999999999999999999988765

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=95.18  E-value=0.29  Score=44.73  Aligned_cols=76  Identities=18%  Similarity=0.181  Sum_probs=52.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCC-ChhhHHHHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS-SFQSVLKFKDSLQQWL  136 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls-~~~~v~~~~~~~~~~~  136 (365)
                      -|+++.|+|+.| +|.--++.--..|++|+++++...+-+++.+.+     +.+.   -+|.+ |++.++++.+.     
T Consensus       181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~L-----GAd~---fv~~~~d~d~~~~~~~~-----  246 (360)
T KOG0023|consen  181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSL-----GADV---FVDSTEDPDIMKAIMKT-----  246 (360)
T ss_pred             CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhc-----Ccce---eEEecCCHHHHHHHHHh-----
Confidence            599999999988 996555444467999999999987777777776     3332   24555 66766665543     


Q ss_pred             hccCCCCCeeEEEec
Q 017812          137 LDSDMHSSIQLLINN  151 (365)
Q Consensus       137 ~~~~~~~~id~lv~n  151 (365)
                          ..+.+|.++|-
T Consensus       247 ----~dg~~~~v~~~  257 (360)
T KOG0023|consen  247 ----TDGGIDTVSNL  257 (360)
T ss_pred             ----hcCcceeeeec
Confidence                23556666554

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=95.11  E-value=0.37  Score=45.11  Aligned_cols=66  Identities=17%  Similarity=0.192  Sum_probs=46.7

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHH---HHHHhhcCCCceEEEEecCCC
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETM---ADITSRNKDARLEAFQVDLSS  121 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~---~~l~~~~~~~~~~~~~~Dls~  121 (365)
                      ..++|+++.|.|. |.||+++|+.|...|++|+..+|+.+......   .++.+.....++.++.+-.+.
T Consensus       142 ~~l~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDiVil~lP~t~  210 (330)
T PRK12480        142 KPVKNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNKDLDFLTYKDSVKEAIKDADIISLHVPANK  210 (330)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhHhhhhhhccCCHHHHHhcCCEEEEeCCCcH
Confidence            4689999999987 56999999999999999999999875432211   123333334566666665554

>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]

Probab=95.10  E-value=2.5  Score=38.22  Aligned_cols=259  Identities=14%  Similarity=0.073  Sum_probs=129.6

Q ss_pred             CCEEEEecCCChHHHHHHHHHHH-CCCEEEEEec-------Cchh----HHHHHHHHHhhcCCCceEEEEecCCChhhHH
Q 017812           59 RPVCIVTGATSGLGAAAAYALSR-EGFHVVLVGR-------SSHL----LSETMADITSRNKDARLEAFQVDLSSFQSVL  126 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~-~G~~Vil~~r-------~~~~----~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~  126 (365)
                      -|.|||.|+|+|-|++.-...+= .|++-+.+.-       ++-.    .....++..+. .+--..-+..|.-+.+--+
T Consensus        41 PKkVLviGaSsGyGLa~RIsaaFG~gAdTiGVffE~pgte~~~gtagwyn~~~f~~~A~~-kGlyAksingDaFS~e~k~  119 (398)
T COG3007          41 PKKVLVIGASSGYGLAARISAAFGPGADTIGVFFERPGTERKPGTAGWYNNAAFKKFAKQ-KGLYAKSINGDAFSDEMKQ  119 (398)
T ss_pred             CceEEEEecCCcccHHHHHHHHhCCCCceeeEEeecCCccCCCcchhhhHHHHHHHHHHh-cCceeeecccchhhHHHHH
Confidence            47899999999999875444432 3565444432       1110    11112222211 1333456678888777777


Q ss_pred             HHHHHHHHHHhccCCCCCeeEEEecCCcccCC------------------------------------CCCCHHHHhHhH
Q 017812          127 KFKDSLQQWLLDSDMHSSIQLLINNAGILATS------------------------------------SRLTPEGYDQMM  170 (365)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~id~lv~nAG~~~~~------------------------------------~~~~~~~~~~~~  170 (365)
                      .+++.|++      .++.+|.+|..-+...+.                                    ...+.++++.+.
T Consensus       120 kvIe~Ik~------~~g~vDlvvYSlAsp~Rk~pktgev~~SalKpIg~a~~~~~ldt~kd~i~e~~lepAseqEI~~Tv  193 (398)
T COG3007         120 KVIEAIKQ------DFGKVDLVVYSLASPRRKHPKTGEVFRSALKPIGEAVSGRTLDTEKDVIIEATLEPASEQEIADTV  193 (398)
T ss_pred             HHHHHHHH------hhccccEEEEeccCccccCCCcchhhHhhhcchhhhccccccccccceeeeeecccccHHHHHHHH
Confidence            88899988      668899999765421000                                    011344555554


Q ss_pred             HHHhHHHH-HHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHH
Q 017812          171 STNYIGAF-FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYEL  249 (365)
Q Consensus       171 ~vN~~~~~-~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l  249 (365)
                      .|.=---+ ..+.+++..-.-.. +.+-|..|-+.....                  .+.....+-+.+|.-++.-++.+
T Consensus       194 ~VMGGeDWq~WidaLl~advlae-g~kTiAfsYiG~~iT------------------~~IYw~GtiG~AK~DLd~~~~~i  254 (398)
T COG3007         194 AVMGGEDWQMWIDALLEADVLAE-GAKTIAFSYIGEKIT------------------HPIYWDGTIGRAKKDLDQKSLAI  254 (398)
T ss_pred             HhhCcchHHHHHHHHHhcccccc-CceEEEEEecCCccc------------------cceeeccccchhhhcHHHHHHHH
Confidence            44211111 22333333211111 244444443332210                  23344556789999999999999


Q ss_pred             HHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcc
Q 017812          250 HRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRT  329 (365)
Q Consensus       250 a~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~  329 (365)
                      ...++... -+.+|. |+-. +-|.....+|........ ....++--.+-|-+.+.+-+++..+-. +|.-.-.|+..-
T Consensus       255 nekLa~~g-G~A~vs-VlKa-vVTqASsaIP~~plYla~-lfkvMKekg~HEgcIeQi~rlfse~ly-~g~~~~~D~e~r  329 (398)
T COG3007         255 NEKLAALG-GGARVS-VLKA-VVTQASSAIPMMPLYLAI-LFKVMKEKGTHEGCIEQIDRLFSEKLY-SGSKIQLDDEGR  329 (398)
T ss_pred             HHHHHhcC-CCeeee-ehHH-HHhhhhhccccccHHHHH-HHHHHHHcCcchhHHHHHHHHHHHHhh-CCCCCCcCcccc
Confidence            98887321 133333 2222 333333333322222111 112232334667777777765543322 244444444444


Q ss_pred             ccCCcccCCHHHH---HHHHHH
Q 017812          330 VNSSALSFNSKLA---GELWTT  348 (365)
Q Consensus       330 ~~~~~~~~d~~~~---~~lw~~  348 (365)
                      +...+....++.|   +.+|..
T Consensus       330 lR~Dd~El~~dvQ~~v~~lw~q  351 (398)
T COG3007         330 LRMDDWELRPDVQDQVRELWDQ  351 (398)
T ss_pred             cccchhhcCHHHHHHHHHHHHh
Confidence            4555555566655   556654

>TIGR00537 hemK_rel_arch HemK-related putative methylase

Probab=95.01  E-value=0.91  Score=38.25  Aligned_cols=74  Identities=18%  Similarity=0.207  Sum_probs=54.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      +++.++=.|+++|.   ++..+++.|.+|+.++.+++.++.+.+.+...  +.++.++..|+.+..              
T Consensus        19 ~~~~vLdlG~G~G~---~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~~~d~~~~~--------------   79 (179)
T TIGR00537        19 KPDDVLEIGAGTGL---VAIRLKGKGKCILTTDINPFAVKELRENAKLN--NVGLDVVMTDLFKGV--------------   79 (179)
T ss_pred             CCCeEEEeCCChhH---HHHHHHhcCCEEEEEECCHHHHHHHHHHHHHc--CCceEEEEccccccc--------------
Confidence            45678888887764   45566677779999999999888888777654  346777888875421              


Q ss_pred             ccCCCCCeeEEEecCCc
Q 017812          138 DSDMHSSIQLLINNAGI  154 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~  154 (365)
                          .+..|+++.|...
T Consensus        80 ----~~~fD~Vi~n~p~   92 (179)
T TIGR00537        80 ----RGKFDVILFNPPY   92 (179)
T ss_pred             ----CCcccEEEECCCC
Confidence                1358999988754

The gene hemK from E. coli was found to contribute to heme biosynthesis and originally suggested to be protoporphyrinogen oxidase (Medline 95189105). Functional analysis of the nearest homolog in Saccharomyces cerevisiae, YNL063w, finds it is not protoporphyrinogen oxidase and sequence analysis suggests that HemK homologs have S-adenosyl-methionine-dependent methyltransferase activity (Medline 99237242). Homologs are found, usually in a single copy, in nearly all completed genomes, but varying somewhat in apparent domain architecture. This model represents an archaeal and eukaryotic protein family that lacks an N-terminal domain found in HemK and its eubacterial homologs. It is found in a single copy in the first six completed archaeal and eukaryotic genomes.

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=95.00  E-value=0.1  Score=45.94  Aligned_cols=36  Identities=28%  Similarity=0.377  Sum_probs=32.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCC---EEEEEecC
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGF---HVVLVGRS   92 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~---~Vil~~r~   92 (365)
                      ++++++++|-|| ||.|+++|..|++.|.   +|++++|+
T Consensus        22 ~l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~   60 (226)
T cd05311          22 KIEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSK   60 (226)
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCC
Confidence            367899999999 8899999999999997   59999998

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>PF12076 Wax2_C: WAX2 C-terminal domain; InterPro: IPR021940 This presumed domain is functionally uncharacterised

Probab=94.99  E-value=0.041  Score=44.70  Aligned_cols=42  Identities=31%  Similarity=0.424  Sum_probs=35.8

Q ss_pred             EEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHh
Q 017812           62 CIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITS  105 (365)
Q Consensus        62 vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~  105 (365)
                      |+.||+++-+|+++|..|.++|.+|++.  +.+..+.+..++..
T Consensus         1 V~L~G~~sKvaraiA~~LC~rgv~V~m~--~~~~y~~lk~~~~~   42 (164)
T PF12076_consen    1 VFLTGNTSKVARAIALALCRRGVQVVML--SKERYESLKSEAPE   42 (164)
T ss_pred             CeecccccHHHHHHHHHHHhcCCEEEEe--cHHHHHHHHHHcCH
Confidence            5789999999999999999999999998  66667777666643

This domain is found in eukaryotes. This domain is about 170 amino acids in length. This domain is found associated with PF04116 from PFAM. This domain has a conserved LEGW sequence motif. This region has similarity to short chain dehydrogenases [].

>PLN02827 Alcohol dehydrogenase-like

Probab=94.97  E-value=0.18  Score=48.19  Aligned_cols=79  Identities=9%  Similarity=0.170  Sum_probs=50.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCCh-hhHHHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF-QSVLKFKDSLQQW  135 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~-~~v~~~~~~~~~~  135 (365)
                      .|++|+|+|+ |+||..++......|+ .|+++++++++.+.+ +++     +.. .+  .|..+. ++..+.+.++.  
T Consensus       193 ~g~~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a-~~l-----Ga~-~~--i~~~~~~~~~~~~v~~~~--  260 (378)
T PLN02827        193 KGSSVVIFGL-GTVGLSVAQGAKLRGASQIIGVDINPEKAEKA-KTF-----GVT-DF--INPNDLSEPIQQVIKRMT--  260 (378)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHc-----CCc-EE--EcccccchHHHHHHHHHh--
Confidence            4889999986 8999999988888998 577788887765443 332     222 11  333322 22333222221  


Q ss_pred             HhccCCCCCeeEEEecCCc
Q 017812          136 LLDSDMHSSIQLLINNAGI  154 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~  154 (365)
                            .+.+|++|.++|.
T Consensus       261 ------~~g~d~vid~~G~  273 (378)
T PLN02827        261 ------GGGADYSFECVGD  273 (378)
T ss_pred             ------CCCCCEEEECCCC
Confidence                  2369999999985

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.96  E-value=0.059  Score=49.29  Aligned_cols=39  Identities=21%  Similarity=0.224  Sum_probs=36.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCch
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH   94 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~   94 (365)
                      +++||.|.|.|.|+-+|+.+|..|.++|++|+++.|...
T Consensus       156 ~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~  194 (301)
T PRK14194        156 DLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRST  194 (301)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCC
Confidence            588999999999999999999999999999999977654

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=94.94  E-value=0.087  Score=44.58  Aligned_cols=45  Identities=22%  Similarity=0.208  Sum_probs=37.4

Q ss_pred             CCCCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHH
Q 017812           52 PPITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLS   97 (365)
Q Consensus        52 ~~~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~   97 (365)
                      ....++.|+++.|.|. |.||+++|+.|...|++|+..+|+.....
T Consensus        29 ~~~~~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~   73 (178)
T PF02826_consen   29 FPGRELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEE   73 (178)
T ss_dssp             TTBS-STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHH
T ss_pred             CCccccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhh
Confidence            3445789999999987 77999999999999999999999987543

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=94.92  E-value=0.055  Score=44.80  Aligned_cols=42  Identities=19%  Similarity=0.277  Sum_probs=33.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLS   97 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~   97 (365)
                      +++||.|+|.|.|.-+|+-++..|.++|+.|.++..+.+.++
T Consensus        33 ~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~   74 (160)
T PF02882_consen   33 DLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQ   74 (160)
T ss_dssp             STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHH
T ss_pred             CCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCccc
Confidence            478999999999999999999999999999999877654443

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]

Probab=94.92  E-value=0.15  Score=47.55  Aligned_cols=67  Identities=16%  Similarity=0.167  Sum_probs=45.8

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEec-CchhHHH-----HHHHHHhhcCCCceEEEEecCCCh
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGR-SSHLLSE-----TMADITSRNKDARLEAFQVDLSSF  122 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r-~~~~~~~-----~~~~l~~~~~~~~~~~~~~Dls~~  122 (365)
                      ..+.|||+-|.|. |.||+++|+.+..-|++|+..++ .......     ...++.+.-...++.++.+=+++.
T Consensus       138 ~el~gkTvGIiG~-G~IG~~va~~l~afgm~v~~~d~~~~~~~~~~~~~~~~~~Ld~lL~~sDiv~lh~PlT~e  210 (324)
T COG0111         138 TELAGKTVGIIGL-GRIGRAVAKRLKAFGMKVIGYDPYSPRERAGVDGVVGVDSLDELLAEADILTLHLPLTPE  210 (324)
T ss_pred             ccccCCEEEEECC-CHHHHHHHHHHHhCCCeEEEECCCCchhhhccccceecccHHHHHhhCCEEEEcCCCCcc
Confidence            3688999999997 55999999999999999999999 3322111     011122222235677777766654

>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein

Probab=94.88  E-value=0.18  Score=46.88  Aligned_cols=41  Identities=12%  Similarity=0.231  Sum_probs=34.4

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHC-CCEEEEEecCchhHHHH
Q 017812           59 RPVCIVTGATSGLGAAAAYALSRE-GFHVVLVGRSSHLLSET   99 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~-G~~Vil~~r~~~~~~~~   99 (365)
                      |.+++|+||++++|.+++...... |++|+.+++++++.+.+
T Consensus       149 g~~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l  190 (336)
T TIGR02817       149 KRALLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQEWV  190 (336)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHH
Confidence            789999999999999987666656 99999999988765544

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	365
3rd5_A	291	Crystal Structure Of A Putative Uncharacterized Pro		7e-12
1nxq_A	251	Crystal Structure Of R-Alcohol Dehydrogenase (Radh)		6e-04

>pdb|3RD5|A Chain A, Crystal Structure Of A Putative Uncharacterized Protein From Mycobacterium Paratuberculosis Length = 291

Iteration: 1
 Score = 68.2 bits (165), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 89/198 (44%), Gaps = 34/198 (17%)
Query: 81  REGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD 140
           R G  V++  R +        +  +R    ++E  ++DL    SV +F D +        
Sbjct: 38  RRGATVIMAVRDTR-----KGEAAARTMAGQVEVRELDLQDLSSVRRFADGV-------- 84
Query: 141 MHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFXXXXXXXXXXNSPVP---SRI 197
             S   +LINNAGI+A    LT +G++  + TN++G F           N  +P    R+
Sbjct: 85  --SGADVLINNAGIMAVPYALTVDGFESQIGTNHLGHF--------ALTNLLLPRLTDRV 134
Query: 198 VNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDK 257
           V V+S  H   +  ++N E +      RS+ Y     Y  SKL  L+F+ EL R L    
Sbjct: 135 VTVSSMAH---WPGRINLEDLN----WRSRRYSPWLAYSQSKLANLLFTSELQRRLTAAG 187
Query: 258 SRHVSVIAADPGVVKTNI 275
           S  +  +AA PG   TN+
Sbjct: 188 S-PLRALAAHPGYSHTNL 204

>pdb|1NXQ|A Chain A, Crystal Structure Of R-Alcohol Dehydrogenase (Radh) (Apoenyzme) From Lactobacillus Brevis Length = 251

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 48/222 (21%), Positives = 83/222 (37%), Gaps = 32/222 (14%)
Query: 81  REGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD 140
            EG  V++ GR S +  +    + + +   +++ FQ D S      K  D+ ++      
Sbjct: 28  EEGAKVMITGRHSDVGEKAAKSVGTPD---QIQFFQHDSSDEDGWTKLFDATEKAF---- 80
Query: 141 MHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGAFFXXXXXXXXXXNSPVPSRIV 198
               +  L+NNAGI    S    T   + ++++ N  G FF          N  + + I+
Sbjct: 81  --GPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASII 138
Query: 199 NVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKS 258
           N++S             E   G         P    Y  SK  + I S     +  L K 
Sbjct: 139 NMSSI------------EGFVGD--------PSLGAYNASKGAVRIMSKSAALDCAL-KD 177
Query: 259 RHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSP 300
             V V    PG +KT ++ ++P     M+      +G +  P
Sbjct: 178 YDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGHIGEP 219

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	365
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	2e-60
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	1e-49
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	1e-36
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	2e-36
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	2e-29
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	9e-29
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	1e-28
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	3e-28
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	3e-28
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	4e-28
1spx_A	278	Short-chain reductase family member (5L265); paral	8e-28
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	9e-28
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	1e-27
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	2e-27
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	3e-27
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	3e-27
1xhl_A	297	Short-chain dehydrogenase/reductase family member	3e-27
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	5e-27
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	1e-26
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	2e-26
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	2e-26
1xkq_A	280	Short-chain reductase family member (5D234); parra	2e-26
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	2e-26
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	3e-26
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	4e-26
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	6e-26
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	8e-26
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	1e-25
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	1e-25
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	2e-25
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	6e-25
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	6e-25
3imf_A	257	Short chain dehydrogenase; structural genomics, in	6e-25
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	1e-24
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	1e-24
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	2e-24
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	2e-24
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	2e-24
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	3e-24
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	3e-24
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	3e-24
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	3e-24
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	4e-24
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	4e-24
1xq1_A	266	Putative tropinone reducatse; structural genomics,	5e-24
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	8e-24
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	1e-23
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	1e-23
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	2e-23
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	3e-23
4e4y_A	244	Short chain dehydrogenase family protein; structur	3e-23
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	3e-23
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	4e-23
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	4e-23
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	4e-23
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	5e-23
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	7e-23
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	7e-23
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	8e-23
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	1e-22
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	1e-22
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	1e-22
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	1e-22
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	1e-22
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	1e-22
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	2e-22
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	2e-22
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	3e-22
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	3e-22
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	4e-22
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	4e-22
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	4e-22
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	4e-22
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	5e-22
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	5e-22
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	6e-22
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	8e-22
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	1e-21
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	1e-21
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	1e-21
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	1e-21
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	1e-21
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	1e-21
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	1e-21
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	1e-21
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	2e-21
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	2e-21
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	2e-21
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	2e-21
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	3e-21
3cxt_A	291	Dehydrogenase with different specificities; rossma	3e-21
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	3e-21
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	3e-21
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	4e-21
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	4e-21
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	4e-21
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	5e-21
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	6e-21
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	8e-21
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	9e-21
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	1e-20
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	1e-20
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	1e-20
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	1e-20
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	1e-20
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	2e-20
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	2e-20
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	2e-20
3rih_A	293	Short chain dehydrogenase or reductase; structural	2e-20
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	3e-20
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	3e-20
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	3e-20
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	4e-20
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	4e-20
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	4e-20
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	6e-20
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	8e-20
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	9e-20
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	9e-20
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	1e-19
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	1e-19
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	2e-19
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	3e-19
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	4e-19
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	5e-19
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	5e-19
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	7e-19
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	7e-19
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	9e-19
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	1e-18
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	1e-18
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	1e-18
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	1e-18
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	1e-18
4dqx_A	277	Probable oxidoreductase protein; structural genomi	1e-18
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	2e-18
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	2e-18
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	2e-18
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	2e-18
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	2e-18
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	3e-18
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	3e-18
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	3e-18
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	3e-18
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	3e-18
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	3e-18
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	3e-18
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	4e-18
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	8e-18
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	9e-18
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	1e-17
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	1e-17
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	1e-17
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	2e-17
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	2e-17
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	2e-17
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	2e-17
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	2e-17
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	2e-17
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	3e-17
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	3e-17
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	3e-17
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	4e-17
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	5e-17
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	6e-17
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	6e-17
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	1e-16
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	2e-16
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	2e-16
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	3e-16
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	3e-16
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	6e-16
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	1e-15
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	1e-15
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	2e-15
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-15
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	3e-15
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	4e-15
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	8e-15
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	2e-14
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	3e-14
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	2e-13
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	4e-12
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	5e-12
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	2e-07
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	4e-11
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	5e-11
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	6e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-05
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	3e-04

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291

 Score =  195 bits (498), Expect = 2e-60
 Identities = 84/306 (27%), Positives = 128/306 (41%), Gaps = 36/306 (11%)

Query: 51  VPPITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDA 110
           +P          ++TGA SGLGA  A  L+R G  V++  R +         +       
Sbjct: 11  LPSFAQ---RTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM-----AG 62

Query: 111 RLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMM 170
           ++E  ++DL    SV +F D +          S   +LINNAGI+A    LT +G++  +
Sbjct: 63  QVEVRELDLQDLSSVRRFADGV----------SGADVLINNAGIMAVPYALTVDGFESQI 112

Query: 171 STNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYP 230
            TN++G F LT LLLP L       R+V V+S  H      ++N E +      RS+ Y 
Sbjct: 113 GTNHLGHFALTNLLLPRLT-----DRVVTVSSMAHW---PGRINLEDLN----WRSRRYS 160

Query: 231 CARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTV 290
               Y  SKL  L+F+ EL R L       +  +AA PG   TN+       L     + 
Sbjct: 161 PWLAYSQSKLANLLFTSELQRRLT-AAGSPLRALAAHPGYSHTNLQGASGRKLGDALMSA 219

Query: 291 LKLLGLLQSPEKGINSVLDAALAPPETSGVY----FFGGKGRTVNSSALSFNSKLAGELW 346
              + +    + G    L AA               + G+ + V  S  + ++ +A  LW
Sbjct: 220 ATRV-VATDADFGARQTLYAASQDLPGDSFVGPRFGYLGRTQPVGRSRRAKDAGMAAALW 278

Query: 347 TTSCNL 352
             S  L
Sbjct: 279 ALSEQL 284

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score =  167 bits (424), Expect = 1e-49
 Identities = 67/290 (23%), Positives = 109/290 (37%), Gaps = 55/290 (18%)

Query: 61  VCIVTGATSGLGAAAAYAL-SREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDL 119
           V +VTG   G+G A    L       VVL  R        +  + +     R    Q+D+
Sbjct: 6   VALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRF--HQLDI 63

Query: 120 SSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTP--EGYDQMMSTNYIGA 177
              QS+   +D L++       +  + +L+NNAGI    +  TP     +  M TN+ G 
Sbjct: 64  DDLQSIRALRDFLRKE------YGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGT 117

Query: 178 FFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN-------AQVNNETITG---------- 220
             +   LLPL+K      R+VNV+S                +  +ETIT           
Sbjct: 118 RDVCTELLPLIKPQG---RVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKF 174

Query: 221 ----KFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLD-KSRHVSVIAADPGVVKTNI 275
               K  +  K    +  Y  +K+ + + S    R L    K   + + A  PG V+T++
Sbjct: 175 VEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDM 234

Query: 276 MREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPET---SGVYF 322
                +                +SPE+G  + +  AL PP+     G + 
Sbjct: 235 AGPKAT----------------KSPEEGAETPVYLALLPPDAEGPHGQFV 268

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score =  132 bits (334), Expect = 1e-36
 Identities = 51/274 (18%), Positives = 95/274 (34%), Gaps = 40/274 (14%)

Query: 61  VCIVTGATSGLGAAAAYALSR---EGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQV 117
           VC++TGA+ G G A A  L+R    G  +++  RS  +L +   ++ ++  D ++     
Sbjct: 8   VCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAA 67

Query: 118 DLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSR-----LTPEGYDQMMST 172
           DL +   V +   ++++      +   +  LINNA  L   S+           +   + 
Sbjct: 68  DLGTEAGVQRLLSAVRELPRPEGLQRLL--LINNAATLGDVSKGFLNVNDLAEVNNYWAL 125

Query: 173 NYIGAFFLTKLLLPLLKNSP-VPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPC 231
           N      LT   L   ++SP +   +VN++S      +                   Y C
Sbjct: 126 NLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGL--------------Y-C 170

Query: 232 ARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS----FLSLMA 287
           A      K    +      + L  +    V V++  PG +  ++ +              
Sbjct: 171 A-----GKAARDMLY----QVLAAE-EPSVRVLSYAPGPLDNDMQQLARETSKDPELRSK 220

Query: 288 FTVLKLLGLLQSPEKGINSVLDAALAPPETSGVY 321
              LK  G L         +L         SG +
Sbjct: 221 LQKLKSDGALVDCGTSAQKLLGLLQKDTFQSGAH 254

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score =  133 bits (336), Expect = 2e-36
 Identities = 70/335 (20%), Positives = 115/335 (34%), Gaps = 92/335 (27%)

Query: 52  PPITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDAR 111
            P T  KR   +VTG   G+G      LS  G  VVL  R      E +  + + N +  
Sbjct: 5   CPNTVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHE-N 63

Query: 112 LEAFQVDLSS-FQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATS------------ 158
           +   Q+D++    ++    D ++           + +L+NNAG+   S            
Sbjct: 64  VVFHQLDVTDPIATMSSLADFIKT------HFGKLDILVNNAGVAGFSVDADRFKAMISD 117

Query: 159 --------------------SRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIV 198
                                  T E  ++ +  NY G   +T++L+PLL+ S    RIV
Sbjct: 118 IGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSD-SPRIV 176

Query: 199 NVTSFTHRNVFNAQVNNETITGKFF-------------------------LRSKCYPCAR 233
           NV+S T        V+NET                               + +  +P   
Sbjct: 177 NVSSSTGSL---KYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFG 233

Query: 234 I-YEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLK 292
             Y  SK CL  ++  L   +         V    PG+VKT +   + +           
Sbjct: 234 AAYTTSKACLNAYTRVLANKI-----PKFQVNCVCPGLVKTEMNYGIGN----------- 277

Query: 293 LLGLLQSPEKGINSVLDAALAPPE-TSGVYFFGGK 326
                 + E+G   V+  AL P +  SG ++   +
Sbjct: 278 -----YTAEEGAEHVVRIALFPDDGPSGFFYDCSE 307

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score =  114 bits (287), Expect = 2e-29
 Identities = 48/223 (21%), Positives = 78/223 (34%), Gaps = 32/223 (14%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
             IVTGA+ G+G   AY L++ G HVV+  RS   L + ++        A        + 
Sbjct: 30  KVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGA-ASAHYIAGTME 88

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGAF 178
                 +F     +          + +LI N     + +          + M  N++   
Sbjct: 89  DMTFAEQFVAQAGKL------MGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYV 142

Query: 179 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYS 238
            LT   LP+LK S     IV V+S               + GK        P    Y  S
Sbjct: 143 VLTVAALPMLKQS--NGSIVVVSS---------------LAGKVAY-----PMVAAYSAS 180

Query: 239 KLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS 281
           K  L  F   + +   + +  +VS+     G++ T    +  S
Sbjct: 181 KFALDGFFSSIRKEYSVSRV-NVSITLCVLGLIDTETAMKAVS 222

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score =  110 bits (278), Expect = 9e-29
 Identities = 47/261 (18%), Positives = 81/261 (31%), Gaps = 48/261 (18%)

Query: 57  IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQ 116
           +     IVTGA SGLG A    L   G  V ++GR    L +    +        +    
Sbjct: 1   MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLL-----GNAVIGIV 55

Query: 117 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNY 174
            DL+  + V     +  +W          +L+++ AG          T E   ++M +N 
Sbjct: 56  ADLAHHEDVDVAFAAAVEW------GGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNL 109

Query: 175 IGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARI 234
           +    + +  + L+        + NV S   +     +                Y CA  
Sbjct: 110 VSTILVAQQTVRLIGER--GGVLANVLSSAAQVGKANESL--------------Y-CA-- 150

Query: 235 YEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLL 294
              SK  +  F   L   L   K   + ++   P  +++                     
Sbjct: 151 ---SKWGMRGFLESLRAEL---KDSPLRLVNLYPSGIRSEFWDNTDHVDP---------- 194

Query: 295 GLLQSPEKGINSVLDAALAPP 315
               +PE     +LDA  A  
Sbjct: 195 SGFMTPEDAAAYMLDALEARS 215

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score =  110 bits (278), Expect = 1e-28
 Identities = 50/255 (19%), Positives = 83/255 (32%), Gaps = 53/255 (20%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVG--RSSHLLSETMADITSRNKDARLEAFQVD 118
           V +VTG + G+G +    L       V+ G  RS   L +            R      D
Sbjct: 4   VILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY-----GDRFFYVVGD 58

Query: 119 LSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS---RLTPEGYDQMMSTNY 174
           ++    + +    +++           I  L+ NAG+L        +    + ++   N+
Sbjct: 59  ITEDSVLKQLVNAAVKGH-------GKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINF 111

Query: 175 IGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARI 234
                L  + LP LK +     +V V+S      F++                 Y  +  
Sbjct: 112 FSIVSLVGIALPELKKT--NGNVVFVSSDACNMYFSSWGA--------------Y-GS-- 152

Query: 235 YEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP--------SFLSLM 286
              SK  L  F+  L       + R V  IA  PG+V T++   +         S   L 
Sbjct: 153 ---SKAALNHFAMTLAN-----EERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLK 204

Query: 287 AFTVLKLLGLLQSPE 301
            F  LK    L    
Sbjct: 205 MFRGLKENNQLLDSS 219

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score =  109 bits (275), Expect = 3e-28
 Identities = 47/228 (20%), Positives = 89/228 (39%), Gaps = 36/228 (15%)

Query: 57  IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDA-RLEAF 115
            ++ + I+TGA+ G+GA  A  L+ +G+ VVL+ RS   L +   +I   NK        
Sbjct: 5   KQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVL 64

Query: 116 QVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI-LATSSRLTPEGYDQMMSTNY 174
            +D++           +         + ++ +L+N A + +  S     + + ++M  N 
Sbjct: 65  PLDITDCTKADTEIKDIH------QKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINV 118

Query: 175 IGAFFLTKLLLPLLK--NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCA 232
           I  + + K +  ++K   +     I NV S                  K       +   
Sbjct: 119 IAQYGILKTVTEIMKVQKN---GYIFNVAS---------------RAAK-----YGFADG 155

Query: 233 RIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP 280
            IY  +K  LL  +  L+R L       + V    PG V T++ ++  
Sbjct: 156 GIYGSTKFALLGLAESLYRELA---PLGIRVTTLCPGWVNTDMAKKAG 200

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score =  109 bits (274), Expect = 3e-28
 Identities = 44/218 (20%), Positives = 74/218 (33%), Gaps = 41/218 (18%)

Query: 60  PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDL 119
            + ++TGA+SGLGA  A     EG    L GRS   LS     ++       +     DL
Sbjct: 2   SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLS-----NNVGYRARDL 56

Query: 120 SSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGA 177
           +S Q V +  + L          S    ++++AG           PE    ++  N   A
Sbjct: 57  ASHQEVEQLFEQL---------DSIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSA 107

Query: 178 FFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEY 237
             + + L+   K+   P  +V + S                  +     +       Y  
Sbjct: 108 INVLRELVKRYKDQ--PVNVVMIMS---------------TAAQ-----QPKAQESTYCA 145

Query: 238 SKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNI 275
            K  +      +   L   K + + +IA  PG + T  
Sbjct: 146 VKWAVKGLIESVRLEL---KGKPMKIIAVYPGGMATEF 180

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score =  110 bits (276), Expect = 4e-28
 Identities = 58/297 (19%), Positives = 96/297 (32%), Gaps = 55/297 (18%)

Query: 20  ALLWPVSLLTSHFQLLFQNLFPRKSNPYKRCVPPITGIKRPVCIVTGATSGLGAAAAYAL 79
                 S   +   L FQ   P++             +   + ++TGA  G+G   AY  
Sbjct: 5   HHHHHSSGREN---LYFQGHMPKRRKS----------VTGEIVLITGAGHGIGRLTAYEF 51

Query: 80  SREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS 139
           ++    +VL   + H L ET A             F VD S+ + +      ++      
Sbjct: 52  AKLKSKLVLWDINKHGLEETAAKCKGLGAKVH--TFVVDCSNREDIYSSAKKVKAE---- 105

Query: 140 DMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRI 197
                + +L+NNAG++ TS          ++    N +  F+ TK  LP +  +     I
Sbjct: 106 --IGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNN-HGHI 162

Query: 198 VNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDK 257
           V V S                 G   +     P    Y  SK   + F   L   L   +
Sbjct: 163 VTVAS---------------AAGHVSV-----PFLLAYCSSKFAAVGFHKTLTDELAALQ 202

Query: 258 SRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP 314
              V      P  V T  ++   + L          L     PE+ +N ++   L  
Sbjct: 203 ITGVKTTCLCPNFVNTGFIKNPSTSL-------GPTL----EPEEVVNRLMHGILTE 248

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score =  109 bits (274), Expect = 8e-28
 Identities = 49/228 (21%), Positives = 89/228 (39%), Gaps = 41/228 (17%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSR-NKDARLEAFQVDL 119
           V I+TG+++G+G A A   +REG  V + GR +  L ET   I +    +  + +   D+
Sbjct: 8   VAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADV 67

Query: 120 SSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGIL------ATSSRLTPEGYDQMMST 172
           ++     +    +L ++         + +L+NNAG         T +  + E YD  ++ 
Sbjct: 68  TTDAGQDEILSTTLGKF-------GKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNL 120

Query: 173 NYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCA 232
           N      LTK  +P L ++     IVN++S                              
Sbjct: 121 NLRSVIALTKKAVPHLSST--KGEIVNISSIASGLHATPDFPY----------------- 161

Query: 233 RIYEYSKLCLLIFSYELHRNLGLD-KSRHVSVIAADPGVVKTNIMREV 279
             Y  +K  +  ++    RN  +D     + V +  PG+V T     +
Sbjct: 162 --YSIAKAAIDQYT----RNTAIDLIQHGIRVNSISPGLVATGFGSAM 203

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score =  109 bits (274), Expect = 9e-28
 Identities = 50/218 (22%), Positives = 88/218 (40%), Gaps = 28/218 (12%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           + +VTGA+ G+GAA A AL ++G  VV   R+   + E  A+  S      L  ++ DLS
Sbjct: 34  LALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLS 93

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGAF 178
           + + +L    +++        HS + + INNAG+    +    +  G+  M + N +   
Sbjct: 94  NEEDILSMFSAIR------SQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALS 147

Query: 179 FLTKLLLPLLKNSPVPS-RIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEY 237
             T+     +K   V    I+N+ S +   V                          Y  
Sbjct: 148 ICTREAYQSMKERNVDDGHIININSMSGHRVLP------------------LSVTHFYSA 189

Query: 238 SKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNI 275
           +K  +   +  L + L   ++ H+      PGVV+T  
Sbjct: 190 TKYAVTALTEGLRQELREAQT-HIRATCISPGVVETQF 226

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score =  109 bits (274), Expect = 1e-27
 Identities = 40/226 (17%), Positives = 75/226 (33%), Gaps = 36/226 (15%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
              VTG  +G+G      L  +G  V +       + + +A + +      +   Q+D++
Sbjct: 10  TAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVA 69

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGAF 178
           S +      D ++           + +L NNAG+         + + +D ++  N  G  
Sbjct: 70  SREGFKMAADEVEAR------FGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVV 123

Query: 179 FLTKLLLPLLKNSPVPS-----RIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCAR 233
                 +P +             +VN  S               +               
Sbjct: 124 NGVTTFVPRMVERVKAGEQKGGHVVNTAS---------------MAAFL-----AAGSPG 163

Query: 234 IYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV 279
           IY  +K  +   S  LH +L   +   VSV+   PG+VK+ I    
Sbjct: 164 IYNTTKFAVRGLSESLHYSLLKYEIG-VSVLC--PGLVKSYIYASD 206

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score =  107 bits (269), Expect = 2e-27
 Identities = 48/149 (32%), Positives = 71/149 (47%), Gaps = 15/149 (10%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDA-RLEAFQVDL 119
           V +VTGA  G+GAAAA A +  G  VVL+GR+   L+E    I S  +    + A  ++ 
Sbjct: 16  VILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLEN 75

Query: 120 SSFQSVLKFKDSLQQWL--LDSDMHSSIQLLINNAGILATSSRL---TPEGYDQMMSTNY 174
           ++ Q   +    ++     LD         L++NA I+   + L     E + Q+M  N 
Sbjct: 76  ATAQQYRELAARVEHEFGRLD--------GLLHNASIIGPRTPLEQLPDEDFMQVMHVNV 127

Query: 175 IGAFFLTKLLLPLLKNSPVPSRIVNVTSF 203
              F LT+ LLPLLK S   S I   +S 
Sbjct: 128 NATFMLTRALLPLLKRSEDAS-IAFTSSS 155

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score =  107 bits (270), Expect = 3e-27
 Identities = 55/238 (23%), Positives = 94/238 (39%), Gaps = 41/238 (17%)

Query: 46  PYKRCVPPITGIKRP------VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSET 99
                    +G+            +TGATSG G A A   +  G+ +VL GR    L   
Sbjct: 2   SSHHHHHHSSGLVPRGSHMSSTLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQAL 61

Query: 100 MADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI---LA 156
             +++      R+    +D+    ++    D+L       +  ++++ LINNAG+     
Sbjct: 62  AGELS---AKTRVLPLTLDVRDRAAMSAAVDNLP------EEFATLRGLINNAGLALGTD 112

Query: 157 TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE 216
            +     + +D M+ TN  G  + T+LLLP L      + IVN+ S              
Sbjct: 113 PAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGS-------------- 158

Query: 217 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTN 274
            + GK       YP + +Y  +K  +  FS  L  +L       V V   +PG+ ++ 
Sbjct: 159 -VAGK-----WPYPGSHVYGGTKAFVEQFSLNLRCDLQ---GTGVRVTNLEPGLCESE 207

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score =  106 bits (268), Expect = 3e-27
 Identities = 37/149 (24%), Positives = 66/149 (44%), Gaps = 15/149 (10%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRN-KDARLEAFQVDL 119
           + +VTGA+ G+G  AA   +R G  V+L+GR+   L +  + I     +  +     +  
Sbjct: 14  IILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLT 73

Query: 120 SSFQSVLKFKDSLQQWL--LDSDMHSSIQLLINNAGILATSSRL---TPEGYDQMMSTNY 174
            + ++  +    +      LD         +++NAG+L     +    P+ +  +M  N 
Sbjct: 74  CTSENCQQLAQRIAVNYPRLD--------GVLHNAGLLGDVCPMSEQNPQVWQDVMQVNV 125

Query: 175 IGAFFLTKLLLPLLKNSPVPSRIVNVTSF 203
              F LT+ LLPLL  S   S +V  +S 
Sbjct: 126 NATFMLTQALLPLLLKSDAGS-LVFTSSS 153

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score =  108 bits (271), Expect = 3e-27
 Identities = 47/225 (20%), Positives = 80/225 (35%), Gaps = 37/225 (16%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDA-RLEAFQVDL 119
             I+TG+++G+G +AA   ++EG  V + GR+   L ET   I      A ++ A   D+
Sbjct: 28  SVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADV 87

Query: 120 SSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS----RLTPEGYDQMMSTNY 174
           +           +L ++         I +L+NNAG              E Y +    N+
Sbjct: 88  TEASGQDDIINTTLAKF-------GKIDILVNNAGANLADGTANTDQPVELYQKTFKLNF 140

Query: 175 IGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARI 234
                +T+     L  +     IVNV+S       ++                       
Sbjct: 141 QAVIEMTQKTKEHLIKT--KGEIVNVSSIVAGPQAHSGYPY------------------- 179

Query: 235 YEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV 279
           Y  +K  L  ++     +L       V V +  PG V T  M  +
Sbjct: 180 YACAKAALDQYTRCTAIDLI---QHGVRVNSVSPGAVATGFMGAM 221

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score =  106 bits (267), Expect = 5e-27
 Identities = 42/253 (16%), Positives = 73/253 (28%), Gaps = 48/253 (18%)

Query: 57  IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQ 116
            +     V GA   +GA  A   + EGF V    R+   L+  +A+I +        A  
Sbjct: 5   PRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIV--ARS 62

Query: 117 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNY 174
           +D  +   V  F ++          H+ +++ I N G          T   + ++     
Sbjct: 63  LDARNEDEVTAFLNAADA-------HAPLEVTIFNVGANVNFPILETTDRVFRKVWEMAC 115

Query: 175 IGAFFLTKLLLPLLKNSPVPSRIVNVTS------FTHRNVFNAQVNNETITGKFFLRSKC 228
              F   +    L+       +I    +       +    F +         KF LR+  
Sbjct: 116 WAGFVSGRESARLMLAH-GQGKIFFTGATASLRGGSGFAAFAS--------AKFGLRA-- 164

Query: 229 YPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAF 288
                            +  + R L         +I      V T  +RE      +   
Sbjct: 165 ----------------VAQSMARELMPKNIHVAHLII--DSGVDTAWVRERRE--QMFGK 204

Query: 289 TVLKLLGLLQSPE 301
             L    LL  P 
Sbjct: 205 DALANPDLLMPPA 217

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score =  105 bits (264), Expect = 1e-26
 Identities = 36/156 (23%), Positives = 59/156 (37%), Gaps = 16/156 (10%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
             IV G T G+G A    L   G  V+L GR+   ++    +        R+ A + D++
Sbjct: 10  KAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF-----GPRVHALRSDIA 64

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGAF 178
               +     +            +I LL  NAG+  L    +++   YD+  + N  GAF
Sbjct: 65  DLNEIAVLGAAAG------QTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAF 118

Query: 179 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN 214
           F  + L PL++       IV  +S            
Sbjct: 119 FTVQRLTPLIREG---GSIVFTSSVADEGGHPGMSV 151

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255

 Score =  104 bits (263), Expect = 2e-26
 Identities = 46/157 (29%), Positives = 73/157 (46%), Gaps = 8/157 (5%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLV-GRSSHLLSETMADITSRNKDARLEAFQVDL 119
           V +VTGA+ G+G A A  L+ +G  V +  G       ET+ +I S    A   +   +L
Sbjct: 9   VALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSA--FSIGANL 66

Query: 120 SSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGA 177
            S   V     SL   L +    +   +LINNAGI   +     T + +D+M+S N    
Sbjct: 67  ESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAP 126

Query: 178 FFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN 214
           FF+ +  L  L+++   SRI+N++S   R      + 
Sbjct: 127 FFIIQQALSRLRDN---SRIINISSAATRISLPDFIA 160

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score =  104 bits (262), Expect = 2e-26
 Identities = 45/217 (20%), Positives = 83/217 (38%), Gaps = 36/217 (16%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V ++TGA+ G+G A A AL+R+G+ + L  RS   L +   ++        +    +D+S
Sbjct: 4   VAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQ-GVEVFYHHLDVS 62

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATS--SRLTPEGYDQMMSTNYIGAF 178
             +SV +F   +       +    + +++ NAG+        L+ E + +M+  N +G +
Sbjct: 63  KAESVEEFSKKVL------ERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVW 116

Query: 179 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYS 238
              K  L  LK +     +V  +  + R +        T   K+  R+            
Sbjct: 117 RTLKAFLDSLKRTGG-LALVTTSDVSARLIPYGGGYVST---KWAARA------------ 160

Query: 239 KLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNI 275
                     L R   ++    V      PG V T  
Sbjct: 161 ----------LVRTFQIENP-DVRFFELRPGAVDTYF 186

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score =  105 bits (264), Expect = 2e-26
 Identities = 39/153 (25%), Positives = 67/153 (43%), Gaps = 17/153 (11%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDA-RLEAFQVDL 119
             I+TG+++G+G   A   ++EG +V + GRSS  L ET   I        ++ +   D+
Sbjct: 8   TVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADV 67

Query: 120 SSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI------LATSSRLTPEGYDQMMST 172
           ++     +    +L+Q+         I +L+NNAG         T +    + Y + +  
Sbjct: 68  TTEDGQDQIINSTLKQF-------GKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKL 120

Query: 173 NYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH 205
           N      +TK + P L  S     IVNV+S   
Sbjct: 121 NLQAVIEMTKKVKPHLVAS--KGEIVNVSSIVA 151

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score =  104 bits (262), Expect = 2e-26
 Identities = 46/255 (18%), Positives = 85/255 (33%), Gaps = 47/255 (18%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           VC+VTGA+ G+G   A  L + G  V + GR    L     +  S            D S
Sbjct: 7   VCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQC--VPVVCDSS 64

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS---------RLTPEGYDQMMS 171
               V    + + +     +    + +L+NNA     +                +D + +
Sbjct: 65  QESEVRSLFEQVDR-----EQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINN 119

Query: 172 TNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT-HRNVFNAQVNNETITGKFFLRSKCYP 230
               G +F +     L+  +     IV ++S    + +FN                    
Sbjct: 120 VGLRGHYFCSVYGARLMVPAG-QGLIVVISSPGSLQYMFNV------------------- 159

Query: 231 CARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTV 290
               Y   K      + +    L       VS ++  PG+V+T +++E  +   ++   V
Sbjct: 160 ---PYGVGKAACDKLAADCAHELR---RHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPV 213

Query: 291 LK----LLGLLQSPE 301
           LK         ++ E
Sbjct: 214 LKQFKSAFSSAETTE 228

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score =  104 bits (262), Expect = 3e-26
 Identities = 29/149 (19%), Positives = 58/149 (38%), Gaps = 10/149 (6%)

Query: 56  GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAF 115
           GI+  + +VT  +SGLG A+A  L+R G  ++L  R+   L    + I S    A+++  
Sbjct: 4   GIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIV 63

Query: 116 QVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTN 173
             D+     + +  +  +             +L+ + G         L  E +D+     
Sbjct: 64  AGDIREPGDIDRLFEKARDL-------GGADILVYSTGGPRPGRFMELGVEDWDESYRLL 116

Query: 174 YIGAFFLTKLLLPLLKNSPVPSRIVNVTS 202
              A ++ +     +       R+V + S
Sbjct: 117 ARSAVWVGRRAAEQMVEKGWG-RMVYIGS 144

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score =  104 bits (262), Expect = 4e-26
 Identities = 36/145 (24%), Positives = 56/145 (38%), Gaps = 11/145 (7%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V +VTG +SG+G A    L   G  V    R    L    + +  R   ARL A   D+ 
Sbjct: 10  VAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVL 69

Query: 121 SFQSVLKF-KDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGA 177
               V  F +   +             +L+NNAG   ++T +  T E + + +   +   
Sbjct: 70  DALQVRAFAEACERTL-------GCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSV 122

Query: 178 FFLTKLLLPLLKNSPVPSRIVNVTS 202
               +  LP L++      IV V S
Sbjct: 123 IHPVRAFLPQLESRADA-AIVCVNS 146

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score =  104 bits (261), Expect = 6e-26
 Identities = 50/224 (22%), Positives = 88/224 (39%), Gaps = 36/224 (16%)

Query: 57  IKRPVCIVTGATSGLGAAAAYALSREG---FHVVLVGRSSHLLSETMADITSRNKDARLE 113
           + +   ++TGA++G+G A A            ++L  R    L E    I     +A++ 
Sbjct: 31  LAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVH 90

Query: 114 AFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI---LATSSRLTPEGYDQMM 170
             Q+D++  + +  F ++L            I +L+NNAG         ++  E    + 
Sbjct: 91  VAQLDITQAEKIKPFIENL------PQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVF 144

Query: 171 STNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYP 230
            TN      +T+ +LP+ +       IVN+ S               I G+       YP
Sbjct: 145 DTNVTALINITQAVLPIFQAKNS-GDIVNLGS---------------IAGR-----DAYP 183

Query: 231 CARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTN 274
              IY  SK  +  F+  L + L    +  + VI   PG+V+T 
Sbjct: 184 TGSIYCASKFAVGAFTDSLRKEL---INTKIRVILIAPGLVETE 224

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score =  103 bits (258), Expect = 8e-26
 Identities = 39/226 (17%), Positives = 74/226 (32%), Gaps = 42/226 (18%)

Query: 57  IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQ 116
           +K+ + +VTGAT G+G      LSR+   V  +GR+   L+              +E  +
Sbjct: 3   LKKKIAVVTGATGGMGIEIVKDLSRDH-IVYALGRNPEHLAALAEIE-------GVEPIE 54

Query: 117 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNY 174
            D+          D L+           +  L++ A +    T    +   +   +  N 
Sbjct: 55  SDIVKEVLEEGGVDKLKNL-------DHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNV 107

Query: 175 IGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARI 234
           I    L++ LLP L+ +     ++ + S                          Y  A  
Sbjct: 108 IVPAELSRQLLPALRAA--SGCVIYINSGAGNGPHPGNTI--------------Y-AA-- 148

Query: 235 YEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP 280
              SK  L   +    +      +  + V    PG   T +++ + 
Sbjct: 149 ---SKHALRGLADAFRKEEA---NNGIRVSTVSPGPTNTPMLQGLM 188

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score =  103 bits (259), Expect = 1e-25
 Identities = 40/147 (27%), Positives = 65/147 (44%), Gaps = 13/147 (8%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           + +VTG  +G+G   A ALS EG+ VV+ GR   +L     +I  R     + A   D+ 
Sbjct: 35  IALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRT-GNIVRAVVCDVG 93

Query: 121 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS---RLTPEGYDQMMSTNYIG 176
               V   F     ++       + + LL+NNAG          +T E ++ +++ N  G
Sbjct: 94  DPDQVAALFAAVRAEF-------ARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTG 146

Query: 177 AFFLTKLLLPL-LKNSPVPSRIVNVTS 202
           AF  T+    +    +P   RI+N  S
Sbjct: 147 AFLCTQHAFRMMKAQTPRGGRIINNGS 173

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score =  103 bits (258), Expect = 1e-25
 Identities = 43/179 (24%), Positives = 76/179 (42%), Gaps = 19/179 (10%)

Query: 29  TSHFQLLFQNLFPRKSNPYKRCVPPITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVL 88
           + H       L PR S+     + P   +   + +VTG + G+G   A  L   G  V +
Sbjct: 4   SHHHHHHSSGLVPRGSH-----MHPYFSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFI 58

Query: 89  VGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLL 148
             R +   ++T   +   +     +A   DLSS     +   +L       ++ + + +L
Sbjct: 59  CARDAEACADTATRL---SAYGDCQAIPADLSSEAGARRLAQAL------GELSARLDIL 109

Query: 149 INNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPV---PSRIVNVTS 202
           +NNAG    A        G++++M  N    F   + LLPLL+ S     P+R++N+ S
Sbjct: 110 VNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGS 168

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score =  102 bits (256), Expect = 2e-25
 Identities = 46/220 (20%), Positives = 87/220 (39%), Gaps = 36/220 (16%)

Query: 57  IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQ 116
           +   V ++TGA+ G+G   A  L   G  ++L  R    +     +I      A   A  
Sbjct: 2   VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTA--LAQV 59

Query: 117 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATS--SRLTPEGYDQMMSTNY 174
           +D++   SV  F  +        D    I +L+NNAG++  S  + +  + +++M+  N 
Sbjct: 60  LDVTDRHSVAAFAQAAV------DTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNI 113

Query: 175 IGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARI 234
            G  +    +LP+++       I+N+ S               I           P A +
Sbjct: 114 KGVLWGIGAVLPIMEAQRSGQ-IINIGS---------------IGAL-----SVVPTAAV 152

Query: 235 YEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTN 274
           Y  +K  +   S      L  + + ++ V   +PGVV++ 
Sbjct: 153 YCATKFAVRAIS----DGLRQEST-NIRVTCVNPGVVESE 187

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score =  101 bits (253), Expect = 6e-25
 Identities = 50/224 (22%), Positives = 78/224 (34%), Gaps = 37/224 (16%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V +VTGA+ G+GAA A  L   G  VVL  R    L     +I +   +A   +   DLS
Sbjct: 31  VAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAE--SHACDLS 88

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS---RLTPEGYDQMMSTNYIGA 177
              ++  F   +         H    +L+NNAG+         + P  +D +++ N    
Sbjct: 89  HSDAIAAFATGVL------AAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAP 142

Query: 178 FFLTKLLLP-LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYE 236
           + L +   P ++        I+N++S   +N                     Y  A    
Sbjct: 143 YLLLRAFAPAMIAAK--RGHIINISSLAGKNPVADGAA--------------Y-TA---- 181

Query: 237 YSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP 280
            SK  L          L       V V    PG V+T     + 
Sbjct: 182 -SKWGLNGLMTSAAEELR---QHQVRVSLVAPGSVRTEFGVGLS 221

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score =  100 bits (252), Expect = 6e-25
 Identities = 41/246 (16%), Positives = 81/246 (32%), Gaps = 42/246 (17%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
             I   A  G+G   +  L +      ++          +A++ + N    +     D++
Sbjct: 7   NVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP-TALAELKAINPKVNITFHTYDVT 65

Query: 121 SFQSVLK--FKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAF 178
              +  K   K    Q         ++ +LIN AGI      L     ++ ++ N+ G  
Sbjct: 66  VPVAESKKLLKKIFDQL-------KTVDILINGAGI------LDDHQIERTIAINFTGLV 112

Query: 179 FLTKLLLPLL--KNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYE 236
             T  +L     +       I N+ S               +TG             +Y 
Sbjct: 113 NTTTAILDFWDKRKGGPGGIIANICS---------------VTGF-----NAIHQVPVYS 152

Query: 237 YSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL-LG 295
            SK  ++ F+  L +         V+  + +PG+ +T ++    S+L +       L   
Sbjct: 153 ASKAAVVSFTNSLAKLAP---ITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSH 209

Query: 296 LLQSPE 301
             Q+ E
Sbjct: 210 PTQTSE 215

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score =  100 bits (252), Expect = 6e-25
 Identities = 32/145 (22%), Positives = 65/145 (44%), Gaps = 12/145 (8%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V I+TG +SG+G   A   ++EG  VV+ GR+   L E   +I            Q+D+ 
Sbjct: 8   VVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQI--LTVQMDVR 65

Query: 121 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGA 177
           +   + K  +   +++         I +LINNA    +  +  L+  G++ +++    G 
Sbjct: 66  NTDDIQKMIEQIDEKF-------GRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGT 118

Query: 178 FFLTKLLLPLLKNSPVPSRIVNVTS 202
           F+ ++ +        +   I+N+ +
Sbjct: 119 FYCSQAIGKYWIEKGIKGNIINMVA 143

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score =   99 bits (250), Expect = 1e-24
 Identities = 30/144 (20%), Positives = 54/144 (37%), Gaps = 9/144 (6%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
             ++TGAT G+GA  A A +  G  +VL GR    L      +  +     +    +DL+
Sbjct: 22  RALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQF-GTDVHTVAIDLA 80

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGAF 178
              +  +            +    + +L+NNAGI          P+ +D  ++ N     
Sbjct: 81  EPDAPAELARRAA------EAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPA 134

Query: 179 FLTKLLLPLLKNSPVPSRIVNVTS 202
            L   +   +  +     I+ V S
Sbjct: 135 LLASAVGKAMVAAGEGGAIITVAS 158

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score =  100 bits (251), Expect = 1e-24
 Identities = 35/145 (24%), Positives = 63/145 (43%), Gaps = 12/145 (8%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
             +VTG + G+G A    L+  G  V    R+   L E +     +  +   E    DL 
Sbjct: 23  TALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNV--EGSVCDLL 80

Query: 121 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGA 177
           S     K  +     +         + +L+NNAG++    +   T + Y+ +M TN+  A
Sbjct: 81  SRTERDKLMQTVAHVF------DGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAA 134

Query: 178 FFLTKLLLPLLKNSPVPSRIVNVTS 202
           + L+++  PLLK S     ++ ++S
Sbjct: 135 YHLSQIAYPLLKASQ-NGNVIFLSS 158

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score = 99.1 bits (248), Expect = 2e-24
 Identities = 50/222 (22%), Positives = 80/222 (36%), Gaps = 38/222 (17%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
             ++TGA+ G+G A A  L  +G+ V L+ R    L    A++              D+ 
Sbjct: 7   AVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEG------ALPLPGDVR 60

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGAF 178
                 +   +++      +    +  L+NNAG+  +     LT E +  ++ TN  GAF
Sbjct: 61  EEGDWARAVAAME------EAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAF 114

Query: 179 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYS 238
              +  +P L      + IVNV S               + GK       +     Y  S
Sbjct: 115 LGIRHAVPALLRRGGGT-IVNVGS---------------LAGK-----NPFKGGAAYNAS 153

Query: 239 KLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP 280
           K  LL  +     +L     R V  +   PG V T      P
Sbjct: 154 KFGLLGLAGAAMLDLREANVR-VVNVL--PGSVDTGFAGNTP 192

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score =   99 bits (250), Expect = 2e-24
 Identities = 39/146 (26%), Positives = 59/146 (40%), Gaps = 16/146 (10%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           + ++TGATSG+G AAA     EG  V + GR   +L   +A+I            Q D +
Sbjct: 31  IAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI-----GGGAVGIQADSA 85

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGAF 178
           +   + +  + ++           I +L  NAG   +     +T E YD     N  G  
Sbjct: 86  NLAELDRLYEKVKAE------AGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVL 139

Query: 179 FLTKLLLPLLKNSPVPSRIVNVTSFT 204
           F  +  LPLL      S +V   S  
Sbjct: 140 FTVQKALPLLARG---SSVVLTGSTA 162

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score = 99.5 bits (249), Expect = 2e-24
 Identities = 39/145 (26%), Positives = 62/145 (42%), Gaps = 12/145 (8%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
             +VTG + G+G      L+  G  V    R+   L++ +    S+      EA   DLS
Sbjct: 11  TALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKV--EASVCDLS 68

Query: 121 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGA 177
           S     +        +      H  + +L+NNAGI+    +   T E Y  +MS N+  A
Sbjct: 69  SRSERQELMNTVANHF------HGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAA 122

Query: 178 FFLTKLLLPLLKNSPVPSRIVNVTS 202
           + L+ L  P LK S     +V ++S
Sbjct: 123 YHLSVLAHPFLKAS-ERGNVVFISS 146

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score = 98.8 bits (247), Expect = 3e-24
 Identities = 49/217 (22%), Positives = 86/217 (39%), Gaps = 40/217 (18%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           + +VTGAT+G G        ++G  V+  GR    L E   ++        L   Q+D+ 
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL-----GDNLYIAQLDVR 56

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI---LATSSRLTPEGYDQMMSTNYIGA 177
           +  ++ +   SL           +I +L+NNAG+   +  + + + E ++ M+ TN  G 
Sbjct: 57  NRAAIEEMLASL------PAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGL 110

Query: 178 FFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEY 237
            ++T+ +LP +        I+N+ S                 G        Y    +Y  
Sbjct: 111 VYMTRAVLPGMVERNH-GHIINIGS---------------TAGS-----WPYAGGNVYGA 149

Query: 238 SKLCLLIFSYELHRNLGLD-KSRHVSVIAADPGVVKT 273
           +K  +  FS     NL  D     V V   +PG+V  
Sbjct: 150 TKAFVRQFS----LNLRTDLHGTAVRVTDIEPGLVGG 182

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score = 99.2 bits (248), Expect = 3e-24
 Identities = 45/147 (30%), Positives = 67/147 (45%), Gaps = 17/147 (11%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           + IVTGA SG+G A A AL+  G+ V L GR    L ET A+I              D++
Sbjct: 30  IAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI-----GDDALCVPTDVT 84

Query: 121 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS---RLTPEGYDQMMSTNYIG 176
              SV   F  +++++         + +L NNAG  A +     LT   + Q++ TN  G
Sbjct: 85  DPDSVRALFTATVEKF-------GRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTG 137

Query: 177 AFFLTKLLLPLLKNSPVPS-RIVNVTS 202
            F  T+    ++K       RI+N  S
Sbjct: 138 PFLCTQEAFRVMKAQEPRGGRIINNGS 164

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score = 99.7 bits (249), Expect = 3e-24
 Identities = 39/222 (17%), Positives = 76/222 (34%), Gaps = 33/222 (14%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
             +VTG  SG+G A A   +R G  +VL       L + +  +  +  DA       D+ 
Sbjct: 33  AAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAH--GVVCDVR 90

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGAF 178
               +++  D   +          + ++ +NAGI+      ++  + +  ++  +  G+ 
Sbjct: 91  HLDEMVRLADEAFRL------LGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSI 144

Query: 179 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYS 238
              +  LP L        I    S                 G              Y  +
Sbjct: 145 HAVEAFLPRLLEQGTGGHIAFTAS---------------FAGLV-----PNAGLGTYGVA 184

Query: 239 KLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP 280
           K  ++  +  L R +  +    VSV+   P VV+T ++    
Sbjct: 185 KYGVVGLAETLAREVKPNGIG-VSVLC--PMVVETKLVSNSE 223

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score = 98.6 bits (246), Expect = 3e-24
 Identities = 53/280 (18%), Positives = 101/280 (36%), Gaps = 61/280 (21%)

Query: 61  VCIVTGATSGLGAAAAYALSREG--FHVVLVGRSSHLLSETMADITSRNKDARLEAFQVD 118
             +VTGA  G+G      L ++    H++   R     +E  +      KD+R+    + 
Sbjct: 5   SVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI-----KDSRVHVLPLT 59

Query: 119 LSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYI 175
           ++  +S+  F   + + +        + LLINNAG+L    T++        + +  N  
Sbjct: 60  VTCDKSLDTFVSKVGEIVGSD----GLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTT 115

Query: 176 GAFFLTKLLLPLLKNSPVP----------SRIVNVTSFTHRNVFNAQVNNETITGKFFLR 225
               LT+ LLPLLKN+             + ++ ++S                 G     
Sbjct: 116 SVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISS---------------GLGSITDN 160

Query: 226 SKCYPCARIYEY--SKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFL 283
           +       +  Y  SK  + +F   L  +L   K  +V V+   PG V+TN+  +  +  
Sbjct: 161 TSGSAQFPVLAYRMSKAAINMFGRTLAVDL---KDDNVLVVNFCPGWVQTNLGGKNAAL- 216

Query: 284 SLMAFTVLKLLGLLQSPEKGINSVLD-AALAPPETSGVYF 322
                          + E+    ++          +G +F
Sbjct: 217 ---------------TVEQSTAELISSFNKLDNSHNGRFF 241

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score = 98.4 bits (246), Expect = 4e-24
 Identities = 54/237 (22%), Positives = 94/237 (39%), Gaps = 44/237 (18%)

Query: 55  TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEA 114
           + ++  V ++TGA+SG+G A A AL+ EG  V +  R    L     ++T+         
Sbjct: 3   SALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKV--HV 60

Query: 115 FQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMST 172
            ++D++  Q V     S        +    + +L+NNAGI  L          + +M+ T
Sbjct: 61  LELDVADRQGVDAAVASTV------EALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDT 114

Query: 173 NYIGAFFLTKLLLP-LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPC 231
           N +G  ++T+  LP LL++      +V ++S               I G+          
Sbjct: 115 NLLGLMYMTRAALPHLLRSK---GTVVQMSS---------------IAGR-----VNVRN 151

Query: 232 ARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAF 288
           A +Y+ +K  +  FS  L + +     R V VI   PG   T            +  
Sbjct: 152 AAVYQATKFGVNAFSETLRQEVTERGVR-VVVIE--PGTTDTE-------LRGHITH 198

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score = 98.8 bits (247), Expect = 4e-24
 Identities = 30/146 (20%), Positives = 57/146 (39%), Gaps = 15/146 (10%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V +++G    LG   A   + +G  +VL  R+   L +    +T   + A   +   D++
Sbjct: 13  VVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRA--LSVGTDIT 70

Query: 121 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS---RLTPEGYDQMMSTNYIG 176
               V     ++++ +         + ++INNA  + +       T E     +     G
Sbjct: 71  DDAQVAHLVDETMKAY-------GRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFG 123

Query: 177 AFFLTKLLLPLLKNSPVPSRIVNVTS 202
           A  L +   P L+ S     +VNV S
Sbjct: 124 ALRLIQGFTPALEES--KGAVVNVNS 147

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score = 98.7 bits (247), Expect = 5e-24
 Identities = 35/146 (23%), Positives = 57/146 (39%), Gaps = 14/146 (9%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
             +VTG T G+G A     +  G  +    R+ + L+E ++    +           D S
Sbjct: 16  TVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQV--TGSVCDAS 73

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI----LATSSRLTPEGYDQMMSTNYIG 176
                 K   ++      S     + +LINN G            T E +   +STN   
Sbjct: 74  LRPEREKLMQTVS-----SMFGGKLDILINNLGAIRSKPTL--DYTAEDFSFHISTNLES 126

Query: 177 AFFLTKLLLPLLKNSPVPSRIVNVTS 202
           A+ L++L  PLLK S     I+ ++S
Sbjct: 127 AYHLSQLAHPLLKAS-GCGNIIFMSS 151

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score = 97.6 bits (244), Expect = 8e-24
 Identities = 46/223 (20%), Positives = 83/223 (37%), Gaps = 35/223 (15%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V +VTGA  G+G A A  L ++GF V +   +        ++I      A   A +VD+S
Sbjct: 4   VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHA--VAVKVDVS 61

Query: 121 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGA 177
               V    + + +             +++NNAG+  ++    +TPE  D++ + N  G 
Sbjct: 62  DRDQVFAAVEQARKTL-------GGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGV 114

Query: 178 FFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEY 237
            +  +  +   K      +I+N  S                          Y  +     
Sbjct: 115 IWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAV--------------Y-SS----- 154

Query: 238 SKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP 280
           SK  +   +    R+L       ++V    PG+VKT +  E+ 
Sbjct: 155 SKFAVRGLTQTAARDLA---PLGITVNGYCPGIVKTPMWAEID 194

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score = 97.2 bits (243), Expect = 1e-23
 Identities = 43/229 (18%), Positives = 82/229 (35%), Gaps = 37/229 (16%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLV--GRSSHLLSETMADITSRNKDARLEAFQVD 118
           V +VTG   G+G   +  L+ +GF + +    +     +ET+  I + ++ A      +D
Sbjct: 4   VAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAV--FVGLD 61

Query: 119 LSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYI 175
           ++   +      ++ ++            +L+NNAGI        +T E   Q+ S N  
Sbjct: 62  VTDKANFDSAIDEAAEKL-------GGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVF 114

Query: 176 GAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIY 235
             FF  +          V  +I+N  S      F                   Y      
Sbjct: 115 SVFFGIQAASRKFDELGVKGKIINAASIAAIQGFPILSA--------------Y-ST--- 156

Query: 236 EYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLS 284
             +K  +   +    + L     +  +V A  PG+V T +  ++ + LS
Sbjct: 157 --TKFAVRGLTQAAAQELA---PKGHTVNAYAPGIVGTGMWEQIDAELS 200

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score = 96.9 bits (242), Expect = 1e-23
 Identities = 52/231 (22%), Positives = 83/231 (35%), Gaps = 45/231 (19%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFH-------VVLVGRSSHLLSETMADITSRNKDARLE 113
           + ++TGA  G+G A A   +R   H       +VL  R++  L +   +  +       +
Sbjct: 4   ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALT--D 61

Query: 114 AFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMS 171
               D+S    V +    +       + +  I  L+NNAG+      S LT E +D  M+
Sbjct: 62  TITADISDMADVRRLTTHIV------ERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMN 115

Query: 172 TNYIGAFFLTKLLLPLLK--NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCY 229
           TN  G FFLT+ L  L++  +S     I  +TS      F                   Y
Sbjct: 116 TNLKGTFFLTQALFALMERQHS---GHIFFITSVAATKAFRHSSI--------------Y 158

Query: 230 PCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP 280
            C      SK         +          +V +    PG V T +  +V 
Sbjct: 159 -CM-----SKFGQRGLVETMRLYAR---KCNVRITDVQPGAVYTPMWGKVD 200

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score = 96.5 bits (241), Expect = 2e-23
 Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 18/151 (11%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH-LLSETMADITSRNKDARLEAFQVDL 119
             ++TG++ G+G A A   +R G  V L GR +   + ET+A + +   DA    F  DL
Sbjct: 9   RVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAA--FFAADL 66

Query: 120 SSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYI 175
           ++ ++  +   + + ++         I +LINNAG L        +    YD +M  N  
Sbjct: 67  ATSEACQQLVDEFVAKF-------GGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIR 119

Query: 176 GAFFLTKLLLPLLKNSPVPS----RIVNVTS 202
                TK  LP L  +   S     +++  S
Sbjct: 120 SVVMTTKFALPHLAAAAKASGQTSAVISTGS 150

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score = 96.4 bits (241), Expect = 3e-23
 Identities = 33/160 (20%), Positives = 59/160 (36%), Gaps = 18/160 (11%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH-LLSETMADITSRNKDARLEAFQVDL 119
             +V GA   +G A A   ++EG +VVL    +    +  +A+I    + A   A + DL
Sbjct: 10  TIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSA--LAIKADL 67

Query: 120 SSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL---TPEGYDQMMSTNYI 175
           ++   V      +  ++         I  L++ AG L     +       + Q++  N  
Sbjct: 68  TNAAEVEAAISAAADKF-------GEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLT 120

Query: 176 GAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNV-FNAQVN 214
             F   K  LP +        IV  +S   R+      + 
Sbjct: 121 SLFLTAKTALPKMAKG---GAIVTFSSQAGRDGGGPGALA 157

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score = 96.1 bits (240), Expect = 3e-23
 Identities = 33/144 (22%), Positives = 52/144 (36%), Gaps = 24/144 (16%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
             +VTG + G+G A    L +   H V+             DI        L+  + DL+
Sbjct: 6   NYLVTGGSKGIGKAVVELLLQNKNHTVINI-----------DIQQSFSAENLKFIKADLT 54

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGAF 178
             Q +          +LD   + S   +  NAGIL   S   +  E   +++  N   + 
Sbjct: 55  KQQDITN--------VLDIIKNVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSI 106

Query: 179 FLTKLLLPLLKNSPVPSRIVNVTS 202
           +  K L   LK     + IV   S
Sbjct: 107 YFIKGLENNLKVG---ASIVFNGS 127

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score = 97.0 bits (242), Expect = 3e-23
 Identities = 31/147 (21%), Positives = 62/147 (42%), Gaps = 15/147 (10%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
             ++TG+TSG+G A A  L++ G ++VL G  +     T+ D  +      +     D++
Sbjct: 27  TAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMT 86

Query: 121 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGA 177
               +         ++           +L+NNAG+           E +D++++ N   +
Sbjct: 87  KPSEIADMMAMVADRF-------GGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSS 139

Query: 178 FFLTKLLLPLLK--NSPVPSRIVNVTS 202
           F   +  +P +K        RI+N+ S
Sbjct: 140 FHTIRGAIPPMKKKGW---GRIINIAS 163

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score = 96.1 bits (240), Expect = 4e-23
 Identities = 28/147 (19%), Positives = 59/147 (40%), Gaps = 17/147 (11%)

Query: 58  KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQV 117
                ++TGA+  +G   A  L   G  V++  R+      ++ ++    + A   A   
Sbjct: 26  SSAPILITGASQRVGLHCALRLLEHGHRVIISYRTE---HASVTEL----RQAGAVALYG 78

Query: 118 DLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI-LATSSRLTPEGYDQMMSTNYI 175
           D S    ++        Q        SS++ +++NA   LA +     + + +M S + +
Sbjct: 79  DFSCETGIMAFIDLLKTQT-------SSLRAVVHNASEWLAETPGEEADNFTRMFSVHML 131

Query: 176 GAFFLTKLLLPLLKNSPVPSRIVNVTS 202
             + +     PLL  S   + IV+++ 
Sbjct: 132 APYLINLHCEPLLTASE-VADIVHISD 157

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score = 96.2 bits (240), Expect = 4e-23
 Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 15/147 (10%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V +VTG+TSG+G   A AL+ +G  +VL G       E +    +     ++     DLS
Sbjct: 6   VAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLS 65

Query: 121 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGA 177
             ++V     ++++Q          I +L+NNAGI   A       E +D +++ N    
Sbjct: 66  KGEAVRGLVDNAVRQM-------GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAV 118

Query: 178 FFLTKLLLPLLK--NSPVPSRIVNVTS 202
           F  T   LP +K        RI+N+ S
Sbjct: 119 FHGTAAALPHMKKQGF---GRIINIAS 142

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score = 95.6 bits (239), Expect = 4e-23
 Identities = 37/144 (25%), Positives = 60/144 (41%), Gaps = 18/144 (12%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
             +VTGA  G+G     AL   G  VV V R+   L   + +         +E   VDL 
Sbjct: 9   RVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC------PGIEPVCVDLG 62

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGAF 178
            +++  +   S+            + LL+NNA +  L     +T E +D+    N     
Sbjct: 63  DWEATERALGSVGP----------VDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVI 112

Query: 179 FLTKLLLPLLKNSPVPSRIVNVTS 202
            +++++   L    VP  IVNV+S
Sbjct: 113 QVSQIVARGLIARGVPGAIVNVSS 136

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score = 95.7 bits (239), Expect = 5e-23
 Identities = 35/146 (23%), Positives = 63/146 (43%), Gaps = 14/146 (9%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V ++TG++SG+G A A   ++EG H+VLV R    L E    +  +    R+    VD++
Sbjct: 9   VAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFG-VRVLEVAVDVA 67

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGAF 178
           + + V    +S++             +L+NNAG     T      E +        + A 
Sbjct: 68  TPEGVDAVVESVR------SSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAV 121

Query: 179 FLTKLLLPLLK--NSPVPSRIVNVTS 202
            L + L+P ++         I++  S
Sbjct: 122 RLARGLVPGMRARGG---GAIIHNAS 144

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score = 95.7 bits (239), Expect = 7e-23
 Identities = 28/145 (19%), Positives = 54/145 (37%), Gaps = 12/145 (8%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
             ++TGA++G+G   A A +  G  V +  R S  L     +I      A     + D++
Sbjct: 34  RALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKAL--PIRCDVT 91

Query: 121 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGA 177
               V         +          I + + NAGI++  +   +  E + ++  TN  G 
Sbjct: 92  QPDQVRGMLDQMTGEL-------GGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGV 144

Query: 178 FFLTKLLLPLLKNSPVPSRIVNVTS 202
           F   +     + +  +   I+   S
Sbjct: 145 FLTAQAAARAMVDQGLGGTIITTAS 169

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score = 95.7 bits (239), Expect = 7e-23
 Identities = 41/153 (26%), Positives = 67/153 (43%), Gaps = 17/153 (11%)

Query: 58  KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH-LLSETMADITSRNKDARLEAFQ 116
            RPV IVTG   G+G   A AL+  GF + + G      ++  +A+++           +
Sbjct: 28  ARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVI--FLR 85

Query: 117 VDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS----RLTPEGYDQMMS 171
            DL+   S        + ++         I  L+NNAGI +        L PE +D ++ 
Sbjct: 86  ADLADLSSHQATVDAVVAEF-------GRIDCLVNNAGIASIVRDDFLDLKPENFDTIVG 138

Query: 172 TNYIGAFFLTKLLL-PLLKNSPVPS-RIVNVTS 202
            N  G  F T+ +L  +L +    S  I+N+TS
Sbjct: 139 VNLRGTVFFTQAVLKAMLASDARASRSIINITS 171

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score = 95.3 bits (238), Expect = 8e-23
 Identities = 30/146 (20%), Positives = 73/146 (50%), Gaps = 13/146 (8%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH-LLSETMADITSRNKDARLEAFQVDL 119
           V ++TG+++GLG + A   + E   VV+  RS     +  + +I     +A   A + D+
Sbjct: 9   VVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEA--IAVKGDV 66

Query: 120 SSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIG 176
           +    V+   + +++++         + ++INNAG+    +S  ++   +++++ TN  G
Sbjct: 67  TVESDVINLVQSAIKEF-------GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTG 119

Query: 177 AFFLTKLLLPLLKNSPVPSRIVNVTS 202
           AF  ++  +     + +   ++N++S
Sbjct: 120 AFLGSREAIKYFVENDIKGTVINMSS 145

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score = 94.9 bits (237), Expect = 1e-22
 Identities = 38/158 (24%), Positives = 70/158 (44%), Gaps = 16/158 (10%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLV-GRSSHLLSETMADITSRNKDARLEAFQVDL 119
           V IVTGA+ G+GAA A  L+ +GF VV+     +    E    I +    A     Q D+
Sbjct: 29  VAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKAL--TAQADV 86

Query: 120 SSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIG 176
           S   +V + F  + + +         + +L+NNAGI+  ++        +D++++ N  G
Sbjct: 87  SDPAAVRRLFATAEEAF-------GGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKG 139

Query: 177 AFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN 214
            F   +     L+      RI+N+++     +  +   
Sbjct: 140 TFNTLREAAQRLRVG---GRIINMSTSQVGLLHPSYGI 174

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score = 95.3 bits (238), Expect = 1e-22
 Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 16/148 (10%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V ++TGA SG+G A A AL+ +G  V  +GR+   + E   +I      A   A + D+S
Sbjct: 30  VALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAI--ALEADVS 87

Query: 121 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS---RLTPEGYDQMMSTNYIG 176
               +    +D + ++         + +++ NAGI    +    L P  +D+ ++ N  G
Sbjct: 88  DELQMRNAVRDLVLKF-------GHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRG 140

Query: 177 AFFLTKLLLP-LLKNSPVPSRIVNVTSF 203
            F    L +P L +       IV V+S 
Sbjct: 141 TFLTLHLTVPYLKQRG--GGAIVVVSSI 166

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score = 94.5 bits (236), Expect = 1e-22
 Identities = 35/145 (24%), Positives = 54/145 (37%), Gaps = 15/145 (10%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
             IVTG + G+GAA A AL + G  V +           +A +          A +VD++
Sbjct: 14  KAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLE-----NGGFAVEVDVT 68

Query: 121 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGA 177
              SV    + ++              LL  NAG+  +  +  +T E +D     N  G 
Sbjct: 69  KRASVDAAMQKAIDAL-------GGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGV 121

Query: 178 FFLTKLLLPLLKNSPVPSRIVNVTS 202
           F   ++       S     IVN  S
Sbjct: 122 FLANQIACRHFLASNTKGVIVNTAS 146

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score = 94.9 bits (237), Expect = 1e-22
 Identities = 37/146 (25%), Positives = 70/146 (47%), Gaps = 17/146 (11%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
             +VTG+T+G+G A A +L  EG +V++ GR    ++ET+ +I ++  DA L+    DL 
Sbjct: 12  TALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLG 71

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGAF 178
           + Q     +D ++++         + +LINN GI        +  E + ++   N +   
Sbjct: 72  TEQGC---QDVIEKY-------PKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGV 121

Query: 179 FLTKLLLPLLK--NSPVPSRIVNVTS 202
            LT+  L  +         R++ + S
Sbjct: 122 RLTRSYLKKMIERKE---GRVIFIAS 144

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score = 94.3 bits (235), Expect = 1e-22
 Identities = 16/145 (11%), Positives = 38/145 (26%), Gaps = 26/145 (17%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
             +V G +  LGA        + ++ + +    +                   +F +  S
Sbjct: 24  NILVLGGSGALGAEVVKFFKSKSWNTISIDFREN--------------PNADHSFTIKDS 69

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL---TPEGYDQMMSTNYIGA 177
             + +    + +            +   +  AG  +  +       +    M+  N   A
Sbjct: 70  GEEEIKSVIEKIN------SKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSA 123

Query: 178 FFLTKLLLPLLKNSPVPSRIVNVTS 202
           F    +   LL         V   +
Sbjct: 124 FASAHIGAKLLNQG---GLFVLTGA 145

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score = 94.1 bits (235), Expect = 1e-22
 Identities = 38/144 (26%), Positives = 61/144 (42%), Gaps = 18/144 (12%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
             +VTGA  G+G     AL   G  VV V R++  L     +         +E   VDL 
Sbjct: 9   RALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC------PGIEPVCVDLG 62

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGAF 178
            + +  K    +            + LL+NNA +  +     +T E +D+  S N    F
Sbjct: 63  DWDATEKALGGIGP----------VDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVF 112

Query: 179 FLTKLLLPLLKNSPVPSRIVNVTS 202
            +++++   + N  VP  IVNV+S
Sbjct: 113 QVSQMVARDMINRGVPGSIVNVSS 136

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score = 95.0 bits (237), Expect = 2e-22
 Identities = 33/156 (21%), Positives = 59/156 (37%), Gaps = 9/156 (5%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V  +TG  +GLG      LS  G   V+  R   +L  T   I+S+    ++ A Q D+ 
Sbjct: 28  VAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTG-NKVHAIQCDVR 86

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGAF 178
               V      L        +     ++INNA    ++ + RL+P  +  +      G  
Sbjct: 87  DPDMVQNTVSELI------KVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTA 140

Query: 179 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN 214
           F+T  +   L  +   +  +++T+          V 
Sbjct: 141 FVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVP 176

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score = 94.2 bits (235), Expect = 2e-22
 Identities = 38/182 (20%), Positives = 63/182 (34%), Gaps = 16/182 (8%)

Query: 41  PRKSNPYKRCVPPITGIKRP------VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH 94
           P        C+P    +  P      V  +TG  SG+G   A    R G H V+  RS  
Sbjct: 3   PPPDVEGDDCLPAYRHLFCPDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLP 62

Query: 95  LLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI 154
            +      +       R     +D+ +  +V+   D              I +LIN A  
Sbjct: 63  RVLTAARKLAGATG-RRCLPLSMDVRAPPAVMAAVDQAL------KEFGRIDILINCAAG 115

Query: 155 --LATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ 212
             L  +  L+   +  +M  +  G F ++++L            IVN+T+         Q
Sbjct: 116 NFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDH-GGVIVNITATLGNRGQALQ 174

Query: 213 VN 214
           V+
Sbjct: 175 VH 176

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score = 93.8 bits (234), Expect = 3e-22
 Identities = 46/240 (19%), Positives = 88/240 (36%), Gaps = 39/240 (16%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLV-GRSSHLLSETMADITSRNKDARLEAFQVDL 119
              VTG + G+GAA A  L+ EG  V L    ++      +++I      A   A + D 
Sbjct: 33  TAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAV--AIRADN 90

Query: 120 SSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIG 176
              +++ +  +++++           + +L+N+AGI  ++     T   +D++M+ N+  
Sbjct: 91  RDAEAIEQAIRETVEAL-------GGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRA 143

Query: 177 AFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYE 236
            F   +     L +     RI+ + S     V    ++                    Y 
Sbjct: 144 PFVAIRSASRHLGDG---GRIITIGSNLAELVPWPGISL-------------------YS 181

Query: 237 YSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFL-SLMAFTVLKLLG 295
            SK  L   +  L R+LG    R ++V    PG   T++         +          G
Sbjct: 182 ASKAALAGLTKGLARDLG---PRGITVNIVHPGSTDTDMNPADGDHAEAQRERIATGSYG 238

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score = 93.3 bits (233), Expect = 3e-22
 Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 10/144 (6%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
             +VTG+  GLG A A  L+  G  V+L    + LL+E++  +T +  DA       D++
Sbjct: 11  TALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDA--HGVAFDVT 68

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAF 178
              ++      L            + +LINNAGI        L  E + +++ TN   AF
Sbjct: 69  DELAIEAAFSKLD------AEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAF 122

Query: 179 FLTKLLLPLLKNSPVPSRIVNVTS 202
            +++     +       +I+N+ S
Sbjct: 123 LVSRSAAKRMIARNSGGKIINIGS 146

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score = 93.4 bits (233), Expect = 4e-22
 Identities = 27/148 (18%), Positives = 57/148 (38%), Gaps = 18/148 (12%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVL---VGRSSHLLSETMADITSRNKDARLEAFQV 117
           V ++ G    LGA  A   + E  ++VL     + S   ++   ++  +        +Q 
Sbjct: 13  VIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKV--ALYQS 70

Query: 118 DLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNY 174
           DLS+ + V K F  + +++         + + IN  G +        +   +D M + N 
Sbjct: 71  DLSNEEEVAKLFDFAEKEF-------GKVDIAINTVGKVLKKPIVETSEAEFDAMDTINN 123

Query: 175 IGAFFLTKLLLPLLKNSPVPSRIVNVTS 202
             A+F  K     +  +     I+ + +
Sbjct: 124 KVAYFFIKQAAKHMNPN---GHIITIAT 148

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score = 93.0 bits (232), Expect = 4e-22
 Identities = 43/149 (28%), Positives = 64/149 (42%), Gaps = 18/149 (12%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V IVTG+  G+G A A AL+REG  VV+   ++         I +    A   +  VD+S
Sbjct: 11  VGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAI--SVAVDVS 68

Query: 121 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS-----RLTPEGYDQMMSTNY 174
             +S       +L ++         I  L+NNA I           + PE Y + MS N 
Sbjct: 69  DPESAKAMADRTLAEF-------GGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNL 121

Query: 175 IGAFFLTKLLLP-LLKNSPVPSRIVNVTS 202
            GA + T+ +   + K       IVN +S
Sbjct: 122 DGALWCTRAVYKKMTKRG--GGAIVNQSS 148

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score = 93.4 bits (233), Expect = 4e-22
 Identities = 50/240 (20%), Positives = 83/240 (34%), Gaps = 55/240 (22%)

Query: 55  TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEA 114
            G  + + ++TGA+SG+G A A   S EG  ++L+ R    L                  
Sbjct: 12  RGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKAL--------NLPNTLC 63

Query: 115 FQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMST 172
            QVD++   +        +       ++     ++NNAG+  L          + +M   
Sbjct: 64  AQVDVTDKYTFDTAITRAE------KIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDV 117

Query: 173 NYIGAFFLTKLLLPLLKNSPVPSR----IVNVTSFTHRNVFNAQVNNETITGKFFLRSKC 228
           N +G     + +L  +K     +R    I+N++S               I GK     K 
Sbjct: 118 NVLGLLNGMQAVLAPMK-----ARNCGTIINISS---------------IAGK-----KT 152

Query: 229 YPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAF 288
           +P    Y  +K  +   S  +   +     R V  IA  P  VKT         LS    
Sbjct: 153 FPDHAAYCGTKFAVHAISENVREEVAASNVR-VMTIA--PSAVKTE-------LLSHTTS 202

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score = 93.5 bits (233), Expect = 5e-22
 Identities = 28/163 (17%), Positives = 56/163 (34%), Gaps = 21/163 (12%)

Query: 58  KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH-LLSETMADITSRNKDARLEAFQ 116
           + P  ++TG    +G + A  L ++GF VV+  R S       +A++ +          +
Sbjct: 10  ECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAG-SAVLCK 68

Query: 117 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI-------------LATSSRLTP 163
            DLS   S+L   + +      +       +L+NNA                A  ++   
Sbjct: 69  GDLSLSSSLLDCCEDIIDCSFRA--FGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPID 126

Query: 164 EGYDQMMSTNYIGAFFLTKLLLPLLKNSPV----PSRIVNVTS 202
               ++  +N +   FL +                  +VN+  
Sbjct: 127 AQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCD 169

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score = 93.0 bits (232), Expect = 5e-22
 Identities = 38/145 (26%), Positives = 69/145 (47%), Gaps = 18/145 (12%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
             +VTGA SG+G AA    +REG  +V V R   LL+E +A +     +A   A   D+S
Sbjct: 8   TILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL-----EAEAIAVVADVS 62

Query: 121 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGA 177
             ++V   F ++L+++         +  + + AG+   A S  L  E +++++  N  G+
Sbjct: 63  DPKAVEAVFAEALEEF-------GRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGS 115

Query: 178 FFLTKLLLPLLKNSPVPSRIVNVTS 202
           F + +    +L+       +V   S
Sbjct: 116 FLVARKAGEVLEEG---GSLVLTGS 137

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score = 92.6 bits (231), Expect = 6e-22
 Identities = 38/148 (25%), Positives = 71/148 (47%), Gaps = 16/148 (10%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V IVTGA SG+G A A   +     VV V      L++ + ++    K+      + D+S
Sbjct: 9   VVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEV--LGVKADVS 66

Query: 121 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI---LATSSRLTPEGYDQMMSTNYIG 176
             + V +  + + + +       S I +L NNAGI   +   + ++ E ++++++ N   
Sbjct: 67  KKKDVEEFVRRTFETY-------SRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYS 119

Query: 177 AFFLTKLLLP-LLKNSPVPSRIVNVTSF 203
           AF+ ++ ++P +LK       IVN  S 
Sbjct: 120 AFYSSRAVIPIMLKQG--KGVIVNTASI 145

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score = 92.7 bits (231), Expect = 8e-22
 Identities = 36/146 (24%), Positives = 63/146 (43%), Gaps = 16/146 (10%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLV-GRSSHLLSETMADITSRNKDARLEAFQVDL 119
           V + TGA  G+G   A  L R G  VV+  G SS    E +A++          A Q D+
Sbjct: 23  VALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQG--VAIQADI 80

Query: 120 SSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIG 176
           S    V+  F  ++  +         +  +++N+G+        +T E +D++ + N  G
Sbjct: 81  SKPSEVVALFDKAVSHF-------GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRG 133

Query: 177 AFFLTKLLLPLLKNSPVPSRIVNVTS 202
            FF+ +  L   +      RI+  +S
Sbjct: 134 QFFVAQQGLKHCRRG---GRIILTSS 156

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score = 92.4 bits (230), Expect = 1e-21
 Identities = 50/282 (17%), Positives = 91/282 (32%), Gaps = 64/282 (22%)

Query: 60  PVCIVTGATSGLGAAAAYAL---SREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQ 116
              ++TG   GLG     AL    +   H+    R+     E           + +   +
Sbjct: 22  NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELED---LAKNHSNIHILE 78

Query: 117 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL---TPEGYDQMMSTN 173
           +DL +F +  K    ++    D      + +L NNAGI   S+R+     +     + TN
Sbjct: 79  IDLRNFDAYDKLVADIEGVTKDQ----GLNVLFNNAGIAPKSARITAVRSQELLDTLQTN 134

Query: 174 YIGAFFLTKLLLPLLKNSPVP----------SRIVNVTSFTHRNVFNAQVNNETITGKFF 223
            +    L K  LPLLK +             + I+N++S               I G   
Sbjct: 135 TVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSS---------------ILGSIQ 179

Query: 224 LRSKCYPCARIYEY--SKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS 281
             +       +Y Y  SK  L   +  L  +L     + +  ++  PG VKT++      
Sbjct: 180 GNTD----GGMYAYRTSKSALNAATKSLSVDL---YPQRIMCVSLHPGWVKTDMGGSSAP 232

Query: 282 FLSLMAFTVLKLLGLLQSPEKGINSVLD-AALAPPETSGVYF 322
                                    ++   +    + +G + 
Sbjct: 233 L----------------DVPTSTGQIVQTISKLGEKQNGGFV 258

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score = 91.8 bits (229), Expect = 1e-21
 Identities = 31/145 (21%), Positives = 59/145 (40%), Gaps = 14/145 (9%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
             I+TGA +G+G   A   +  G  VV+   ++   +  + +I      A   A + D++
Sbjct: 13  CAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQA--FACRCDIT 70

Query: 121 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGIL-ATSSRLTPEGYDQMMSTNYIGAF 178
           S Q +      ++ +          + +L+NNAG        +    + +    N    F
Sbjct: 71  SEQELSALADFAISKL-------GKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFF 123

Query: 179 FLTKLLLPL-LKNSPVPSRIVNVTS 202
            L++L+ P   KN      I+ +TS
Sbjct: 124 HLSQLVAPEMEKNG--GGVILTITS 146

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score = 91.8 bits (229), Expect = 1e-21
 Identities = 29/146 (19%), Positives = 61/146 (41%), Gaps = 14/146 (9%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V +VT +T G+G A A  L+++G HVV+  R    +  T+A +               + 
Sbjct: 16  VALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSV--TGTVCHVG 73

Query: 121 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI---LATSSRLTPEGYDQMMSTNYIG 176
             +   +    ++         H  + +L++NA +          T E +D+++  N   
Sbjct: 74  KAEDRERLVAMAVNL-------HGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKA 126

Query: 177 AFFLTKLLLPLLKNSPVPSRIVNVTS 202
              +TK ++P ++       ++ V+S
Sbjct: 127 TVLMTKAVVPEMEKRG-GGSVLIVSS 151

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score = 92.2 bits (230), Expect = 1e-21
 Identities = 37/152 (24%), Positives = 65/152 (42%), Gaps = 16/152 (10%)

Query: 58  KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH-LLSETMADITSRNKDARLEAFQ 116
             PV +VTG + G+GAA     +R+G+ V +   ++       +A IT    +A   A  
Sbjct: 25  DTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEA--VAIP 82

Query: 117 VDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL---TPEGYDQMMST 172
            D+ +   +   F    +Q+         +  L+NNAGI+    R+   + E  ++M+  
Sbjct: 83  GDVGNAADIAAMFSAVDRQF-------GRLDGLVNNAGIVDYPQRVDEMSVERIERMLRV 135

Query: 173 NYIGAFFLTKLLLPLL--KNSPVPSRIVNVTS 202
           N  G+       +  +    S     IVNV+S
Sbjct: 136 NVTGSILCAAEAVRRMSRLYSGQGGAIVNVSS 167

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score = 90.7 bits (226), Expect = 1e-21
 Identities = 44/255 (17%), Positives = 80/255 (31%), Gaps = 60/255 (23%)

Query: 63  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 122
           ++TGAT GLG A A AL  +G  ++L GR +  L+E   ++          A   DL+  
Sbjct: 4   LITGATGGLGGAFARAL--KGHDLLLSGRRAGALAELAREV-------GARALPADLADE 54

Query: 123 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGAFFL 180
                     +  L   +    + LL++  G    A+      +  ++M++ + + A   
Sbjct: 55  LEA-------KALL---EEAGPLDLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAA-- 102

Query: 181 TKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKL 240
              +L   +      R V   +                           P    Y  +K 
Sbjct: 103 --FVLKHARFQKGA-RAVFFGA---------------YPRYV-----QVPGFAAYAAAKG 139

Query: 241 CLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSP 300
            L  +     + L       V ++      V T +   +          +        SP
Sbjct: 140 ALEAYLEAARKEL---LREGVHLVLVRLPAVATGLWAPLGGP---PKGAL--------SP 185

Query: 301 EKGINSVLDAALAPP 315
           E+    VL+     P
Sbjct: 186 EEAARKVLEGLFREP 200

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score = 91.8 bits (229), Expect = 1e-21
 Identities = 39/149 (26%), Positives = 61/149 (40%), Gaps = 16/149 (10%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V ++TG  SGLG A A  L+ EG  + LV  SS  L  + A +     DA +     D+S
Sbjct: 15  VVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVS 74

Query: 121 SFQSVLKFKDSLQQWLLDS--DMHSSIQLLINNAGILATSSRL---TPEGYDQMMSTNYI 175
               V        +  + +  +    I    NNAGI    +     T   +D+++S N  
Sbjct: 75  DEAQV--------EAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLR 126

Query: 176 GAFFLTKLLLP-LLKNSPVPSRIVNVTSF 203
           G F   + +L  + +       +VN  S 
Sbjct: 127 GVFLGLEKVLKIMREQG--SGMVVNTASV 153

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score = 91.8 bits (229), Expect = 1e-21
 Identities = 29/147 (19%), Positives = 59/147 (40%), Gaps = 16/147 (10%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V IVTG    +G A   AL+  G  V++      + ++ + D+     D    +  +D++
Sbjct: 15  VAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDV--SSVVMDVT 72

Query: 121 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS---RLTPEGYDQMMSTNYIG 176
           + +SV    +   +Q          + +L+  AGI  +      +T   + + +  N  G
Sbjct: 73  NTESVQNAVRSVHEQE-------GRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNG 125

Query: 177 AFFLTKLLLP-LLKNSPVPSRIVNVTS 202
            F   + +   +L+       IV + S
Sbjct: 126 MFRSCQAVGRIMLEQK--QGVIVAIGS 150

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score = 91.4 bits (228), Expect = 1e-21
 Identities = 30/147 (20%), Positives = 58/147 (39%), Gaps = 16/147 (10%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH-LLSETMADITSRNKDARLEAFQVDL 119
             +VTG++ G+G AAA  L+  G+++V+    S     ET  +I            + ++
Sbjct: 6   CALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVL--VVKANV 63

Query: 120 SSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIG 176
                + + F+   + +         + + +NNA    L     L    +D  M+ N   
Sbjct: 64  GQPAKIKEMFQQIDETF-------GRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKA 116

Query: 177 AFFLTKLLLP-LLKNSPVPSRIVNVTS 202
             F  +     + KN      IV+++S
Sbjct: 117 LLFCAQEAAKLMEKNG--GGHIVSISS 141

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score = 91.5 bits (228), Expect = 2e-21
 Identities = 33/145 (22%), Positives = 62/145 (42%), Gaps = 16/145 (11%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V +VTGA  G+G A A AL  +G  V LV  +     +  A +  + +  +    Q D++
Sbjct: 9   VALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVA 68

Query: 121 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFF 179
             Q +   F+  +  +         + +L+NNAG+         + +++ +  N +    
Sbjct: 69  DQQQLRDTFRKVVDHF-------GRLDILVNNAGV------NNEKNWEKTLQINLVSVIS 115

Query: 180 LTKLLLPLLK--NSPVPSRIVNVTS 202
            T L L  +   N      I+N++S
Sbjct: 116 GTYLGLDYMSKQNGGEGGIIINMSS 140

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score = 91.5 bits (228), Expect = 2e-21
 Identities = 38/155 (24%), Positives = 72/155 (46%), Gaps = 16/155 (10%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLV-GRSSHLLSETMADITSRNKDARLEAFQVDL 119
           V +VTG+  G+GAA A  L R G  VV+    S+    + +++I +   DA   A + D+
Sbjct: 20  VALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDA--IAIKADI 77

Query: 120 SSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIG 176
                ++K F  ++  +         + + ++N+G+++      +T E +D++ S N  G
Sbjct: 78  RQVPEIVKLFDQAVAHF-------GHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRG 130

Query: 177 AFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA 211
            FF+ +     L       RIV  +S T ++    
Sbjct: 131 QFFVAREAYRHLTEG---GRIVLTSSNTSKDFSVP 162

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score = 91.5 bits (228), Expect = 2e-21
 Identities = 39/150 (26%), Positives = 67/150 (44%), Gaps = 19/150 (12%)

Query: 60  PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDL 119
            V +VTGATSG+G   A  L +EG  V +  R    L  T+ ++     +A  +    D+
Sbjct: 23  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEA--DGRTCDV 80

Query: 120 SSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIG 176
            S   +       ++++         + +L+NNAG      ++ L  E +  ++ TN  G
Sbjct: 81  RSVPEIEALVAAVVERY-------GPVDVLVNNAGRPGGGATAELADELWLDVVETNLTG 133

Query: 177 AFFLTKLLLPLL----KNSPVPSRIVNVTS 202
            F +TK +L       + +    RIVN+ S
Sbjct: 134 VFRVTKQVLKAGGMLERGT---GRIVNIAS 160

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score = 91.5 bits (228), Expect = 2e-21
 Identities = 34/148 (22%), Positives = 59/148 (39%), Gaps = 17/148 (11%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
              VTG +SG+G A A  L+  G  V    R +  +S  +  + +   D   +    D++
Sbjct: 26  TAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDV--DGSSCDVT 83

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAF 178
           S   V     +        +    I +L+N+AG      ++ L    +  ++ TN  G F
Sbjct: 84  STDEVHAAVAAAV------ERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVF 137

Query: 179 FLTKLLLPLL----KNSPVPSRIVNVTS 202
            +T+ +L              RIVN+ S
Sbjct: 138 RVTREVLRAGGMREAGW---GRIVNIAS 162

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score = 90.7 bits (226), Expect = 3e-21
 Identities = 34/146 (23%), Positives = 61/146 (41%), Gaps = 24/146 (16%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V ++TGA+ G+GA    A     + VV   RS              + D  +     D+S
Sbjct: 30  VVVITGASQGIGAGLVRAYRDRNYRVVATSRSI-----------KPSADPDIHTVAGDIS 78

Query: 121 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGA 177
             ++  +  ++ ++++         I  L+NNAG+        +T E YD  +  N  G 
Sbjct: 79  KPETADRIVREGIERF-------GRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGF 131

Query: 178 FFLTKLLLP-LLKNSPVPSRIVNVTS 202
           F +T+     +LK       IV++T+
Sbjct: 132 FHITQRAAAEMLKQG--SGHIVSITT 155

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score = 90.7 bits (226), Expect = 3e-21
 Identities = 47/223 (21%), Positives = 79/223 (35%), Gaps = 34/223 (15%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
             +VTG T G+G   A   +R G +V + GRS+  +   +AD+  +    ++   Q D+S
Sbjct: 12  SVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADL-DQLGSGKVIGVQTDVS 70

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAF 178
                              +    I ++  NAG+   A  + +TPE  + + + N  G F
Sbjct: 71  DRAQCDALAGRAV------EEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTF 124

Query: 179 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA-QVNNETITGKFFLRSKCYPCARIYEY 237
           +  +  L  L  S    R+V  +S T          +                    Y  
Sbjct: 125 YAVQACLDALIASGS-GRVVLTSSITGPITGYPGWSH--------------------YGA 163

Query: 238 SKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP 280
           +K   L F       L       ++V A  PG + T  + E  
Sbjct: 164 TKAAQLGFMRTAAIELA---PHKITVNAIMPGNIMTEGLLENG 203

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score = 90.3 bits (225), Expect = 3e-21
 Identities = 40/145 (27%), Positives = 69/145 (47%), Gaps = 15/145 (10%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
             +VTG+TSG+G   A  L+R G ++VL G      +  +A+I      A       DLS
Sbjct: 6   TALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARHGVKAV--HHPADLS 61

Query: 121 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGA 177
               +   F  + +++         + +L+NNAGI  +A   +   E +D++++ N    
Sbjct: 62  DVAQIEALFALAEREF-------GGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAV 114

Query: 178 FFLTKLLLPLLKNSPVPSRIVNVTS 202
           F  T+L LP ++      RI+N+ S
Sbjct: 115 FHGTRLALPGMRARNW-GRIINIAS 138

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score = 90.7 bits (226), Expect = 4e-21
 Identities = 30/145 (20%), Positives = 59/145 (40%), Gaps = 15/145 (10%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
             ++TG+  G+G A A A  REG  V +         +  A+I          A Q+D++
Sbjct: 10  SALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI-----GPAAYAVQMDVT 64

Query: 121 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGA 177
              S+      +++           + +L+NNA +   +    +T E Y+++ + N  G 
Sbjct: 65  RQDSIDAAIAATVEHA-------GGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGT 117

Query: 178 FFLTKLLLPLLKNSPVPSRIVNVTS 202
            F  +     +       +I+N+ S
Sbjct: 118 LFTLQAAARQMIAQGRGGKIINMAS 142

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score = 90.7 bits (226), Expect = 4e-21
 Identities = 31/152 (20%), Positives = 62/152 (40%), Gaps = 18/152 (11%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITS-----RNKDARLEAF 115
           + +VTGA SG+G A +  L+ EG  V           ET+  +               AF
Sbjct: 9   LALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAF 68

Query: 116 QVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI----LATSSRLTPEGYDQMM 170
           Q D+S  ++     +     +           ++++ AGI          ++ + +D+++
Sbjct: 69  QADVSEARAARCLLEQVQACFSRPPS------VVVSCAGITQDEFLL--HMSEDDWDKVI 120

Query: 171 STNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 202
           + N  G F +T+     L ++     I+N++S
Sbjct: 121 AVNLKGTFLVTQAAAQALVSNGCRGSIINISS 152

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score = 91.1 bits (227), Expect = 4e-21
 Identities = 25/149 (16%), Positives = 60/149 (40%), Gaps = 17/149 (11%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDA-RLEAFQVDL 119
             +VTG  SG+G   A  L   G  V++VGR+   L+  + ++ +   +   +     D+
Sbjct: 13  TYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDI 72

Query: 120 SSFQSVLKFKDSLQQWLLDS--DMHSSIQLLINNAGI---LATSSRLTPEGYDQMMSTNY 174
           ++               +D+    H  +  +++ AG    +   +++  E + + +  N 
Sbjct: 73  TNEDET--------ARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNV 124

Query: 175 IGAFFLTKLLLP-LLKNSPVPSRIVNVTS 202
            G  ++ K     +++        V ++S
Sbjct: 125 NGTMYVLKHAAREMVRGG--GGSFVGISS 151

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score = 91.8 bits (228), Expect = 5e-21
 Identities = 32/152 (21%), Positives = 69/152 (45%), Gaps = 20/152 (13%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH-------LLSETMADITSRNKDARLE 113
              +TGA+ G+G A A   +++G ++V+  +++         +     +I +    A   
Sbjct: 47  TVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKA--L 104

Query: 114 AFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMM 170
              VD+   Q +    + +++++         I +L+NNA  ++ ++      +  D MM
Sbjct: 105 PCIVDVRDEQQISAAVEKAIKKF-------GGIDILVNNASAISLTNTLDTPTKRLDLMM 157

Query: 171 STNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 202
           + N  G +  +K  +P LK S V   I+N++ 
Sbjct: 158 NVNTRGTYLASKACIPYLKKSKVA-HILNISP 188

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score = 90.4 bits (225), Expect = 6e-21
 Identities = 26/162 (16%), Positives = 57/162 (35%), Gaps = 22/162 (13%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH-------LLSETMADITSRNKDARLE 113
              ++G + G+G A A  ++ +G +V LV +S+         +     +I      A   
Sbjct: 11  TMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQA--L 68

Query: 114 AFQVDLSSFQSVLKFKDSLQQWLLDS--DMHSSIQLLINNAGI--LATSSRLTPEGYDQM 169
               D+    +V           +    +    I + +NNA    L +   +  + +D M
Sbjct: 69  PIVGDIRDGDAV--------AAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLM 120

Query: 170 MSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA 211
                 G + +++  +P +K    P  I+ ++          
Sbjct: 121 NGIQVRGTYAVSQSCIPHMKGRDNP-HILTLSPPIRLEPKWL 161

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score = 89.9 bits (224), Expect = 8e-21
 Identities = 38/145 (26%), Positives = 67/145 (46%), Gaps = 15/145 (10%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
             +VTGA SG+G A A+  +R G HV+  GR+   + E   +I      A  EA   DL+
Sbjct: 33  TAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDG-VKEVADEIADGGGSA--EAVVADLA 89

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAF 178
             +      + L            + +L+NNAGI+  A +  ++   + ++++ N   A+
Sbjct: 90  DLEGAANVAEELAA-------TRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAW 142

Query: 179 FLTKLLLP-LLKNSPVPSRIVNVTS 202
            L++     +L +     RIV + S
Sbjct: 143 VLSRSFGTAMLAHG--SGRIVTIAS 165

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score = 89.5 bits (223), Expect = 9e-21
 Identities = 40/146 (27%), Positives = 66/146 (45%), Gaps = 15/146 (10%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V I+TG T G+G A A     EG  V++ GR S +  +    +       +++ FQ D S
Sbjct: 8   VAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSV---GTPDQIQFFQHDSS 64

Query: 121 SFQSVLKFKDSLQQWLLDS--DMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIG 176
                          L D+       +  L+NNAGI    S    T   + ++++ N  G
Sbjct: 65  DEDGW--------TKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDG 116

Query: 177 AFFLTKLLLPLLKNSPVPSRIVNVTS 202
            FF T+L +  +KN  + + I+N++S
Sbjct: 117 VFFGTRLGIQRMKNKGLGASIINMSS 142

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score = 89.6 bits (223), Expect = 1e-20
 Identities = 36/147 (24%), Positives = 67/147 (45%), Gaps = 16/147 (10%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           VC+VTGA   +G A A  L+ EG  + L+  +   L +  A +  +  +A   ++  D++
Sbjct: 9   VCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEA--RSYVCDVT 66

Query: 121 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI---LATSSRLTPEGYDQMMSTNYIG 176
           S ++V+      ++ +         I  L NNAG     A       + + ++++ N  G
Sbjct: 67  SEEAVIGTVDSVVRDF-------GKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTG 119

Query: 177 AFFLTKLLLP-LLKNSPVPSRIVNVTS 202
           AF + K +   ++  +    RIVN  S
Sbjct: 120 AFHVLKAVSRQMITQN--YGRIVNTAS 144

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score = 89.6 bits (223), Expect = 1e-20
 Identities = 34/174 (19%), Positives = 64/174 (36%), Gaps = 29/174 (16%)

Query: 51  VPPITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDA 110
           VP  + ++ P  +VTGA   +G A A  L + G+ VV+   +S   + ++AD  ++ +  
Sbjct: 15  VPRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSN 74

Query: 111 RLEAFQVDLSSFQSVLK-----FKDSLQQWLLDSDMHSSIQLLINNAGI----------- 154
                Q DL++   +            + +           +L+NNA             
Sbjct: 75  TAVVCQADLTNSNVLPASCEEIINSCFRAF-------GRCDVLVNNASAFYPTPLVQGDH 127

Query: 155 -LATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPS-----RIVNVTS 202
              ++ +       +++ TN I  F LT       K +          IVN+  
Sbjct: 128 EDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCD 181

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score = 89.6 bits (223), Expect = 1e-20
 Identities = 32/146 (21%), Positives = 70/146 (47%), Gaps = 16/146 (10%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLV-GRSSHLLSETMADITSRNKDARLEAFQVDL 119
           V +VTGA  G+G   A  L R G  V++    S+    E +A I     DA     + ++
Sbjct: 31  VALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDA--ACVKANV 88

Query: 120 SSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIG 176
              + +++ F+++++ +         + ++ +N+G+++      +TPE +D++ + N  G
Sbjct: 89  GVVEDIVRMFEEAVKIF-------GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRG 141

Query: 177 AFFLTKLLLPLLKNSPVPSRIVNVTS 202
            FF+ +     L+      R++ + S
Sbjct: 142 QFFVAREAYKHLEIG---GRLILMGS 164

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score = 88.7 bits (221), Expect = 1e-20
 Identities = 27/144 (18%), Positives = 56/144 (38%), Gaps = 14/144 (9%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
              VTGA SG+G     A +  G  ++L+ R +  L     ++ +            D++
Sbjct: 13  CAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAA----VAARIVADVT 68

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAF 178
             +++       +         + + +L+N+AGI     +       + Q+M+ N  G F
Sbjct: 69  DAEAMTAAAAEAEAV-------APVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMF 121

Query: 179 FLTKLLLPLLKNSPVPSRIVNVTS 202
           + ++     +        IVN+ S
Sbjct: 122 WASRAFGRAMVARG-AGAIVNLGS 144

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score = 88.7 bits (221), Expect = 1e-20
 Identities = 36/145 (24%), Positives = 58/145 (40%), Gaps = 14/145 (9%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V IVTGA +G+G A A   ++ G  VV+    S       A I      A     + +++
Sbjct: 14  VAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAI--GLECNVT 71

Query: 121 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGIL-ATSSRLTPEGYDQMMSTNYIGAF 178
             Q      K +L Q+         I +L+NNAG        +    ++     N    F
Sbjct: 72  DEQHREAVIKAALDQF-------GKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLF 124

Query: 179 FLTKLLLP-LLKNSPVPSRIVNVTS 202
            L++L  P + K       I+N++S
Sbjct: 125 RLSQLAAPHMQKAG--GGAILNISS 147

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score = 89.2 bits (222), Expect = 2e-20
 Identities = 34/148 (22%), Positives = 70/148 (47%), Gaps = 19/148 (12%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V +VTGA  G+G   A  L++   HV+ + R+       + +I S   ++    +  D+S
Sbjct: 46  VALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESS--GYAGDVS 103

Query: 121 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI----LATSSRLTPEGYDQMMSTNYI 175
             + + +     L +         ++ +L+NNAGI    L    R+  + ++ ++ TN  
Sbjct: 104 KKEEISEVINKILTEH-------KNVDILVNNAGITRDNLFL--RMKNDEWEDVLRTNLN 154

Query: 176 GAFFLTKLLL-PLLKNSPVPSRIVNVTS 202
             F++T+ +   ++ N     RI+N++S
Sbjct: 155 SLFYITQPISKRMINNR--YGRIINISS 180

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score = 88.7 bits (221), Expect = 2e-20
 Identities = 34/146 (23%), Positives = 57/146 (39%), Gaps = 17/146 (11%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           + ++TG  +G+G A A   + EG  + +         E  A I +  +       + D+S
Sbjct: 9   LAVITGGANGIGRAIAERFAVEGADIAIADLVP--APEAEAAIRNLGRRVL--TVKCDVS 64

Query: 121 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGA 177
               V    K  +  +           +L+NNAGI        LT E + +    N    
Sbjct: 65  QPGDVEAFGKQVISTF-------GRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSG 117

Query: 178 FFLTKLLLPL-LKNSPVPSRIVNVTS 202
           F + K  +P   +N     RI+N+TS
Sbjct: 118 FLMAKAFVPGMKRNG--WGRIINLTS 141

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score = 88.7 bits (221), Expect = 2e-20
 Identities = 36/145 (24%), Positives = 62/145 (42%), Gaps = 10/145 (6%)

Query: 61  VCIVTGAT-SGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDL 119
           V +VT A  +G+G+  A     EG  VV+       L ET   +       R+EA   D+
Sbjct: 24  VVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLG-LGRVEAVVCDV 82

Query: 120 SSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGA 177
           +S ++V    D+L    ++      + +L+NNAG+        +T E +D++++      
Sbjct: 83  TSTEAV----DALITQTVEK--AGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSV 136

Query: 178 FFLTKLLLPLLKNSPVPSRIVNVTS 202
              T+  L   +       IVN  S
Sbjct: 137 MRATRAALRYFRGVDHGGVIVNNAS 161

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score = 88.8 bits (221), Expect = 2e-20
 Identities = 33/161 (20%), Positives = 62/161 (38%), Gaps = 19/161 (11%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
             +VTG T G+G   A   +R G +V +  RS   LS   A++        +   ++D+S
Sbjct: 43  SVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAEL-GELGAGNVIGVRLDVS 101

Query: 121 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI----LATSSRLTPEGYDQMMSTNYI 175
              S     +  +  +        ++ ++  NAGI          +TPE   +++  N  
Sbjct: 102 DPGSCADAARTVVDAF-------GALDVVCANAGIFPEARLD--TMTPEQLSEVLDVNVK 152

Query: 176 GAFFLTKLLL-PLLKNSPVPSRIVNVTSFTHRNVFNA-QVN 214
           G  +  +  L PL  +     R++  +S T          +
Sbjct: 153 GTVYTVQACLAPLTASG--RGRVILTSSITGPVTGYPGWSH 191

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score = 88.4 bits (220), Expect = 3e-20
 Identities = 40/148 (27%), Positives = 64/148 (43%), Gaps = 16/148 (10%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           + IVTGA+SG+G AAA   +REG  VV+  R+ + L+E   +I     +A   A   D+ 
Sbjct: 10  IAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEA--AALAGDVG 67

Query: 121 SFQSVLKFKDSLQQWLLDS--DMHSSIQLLINNAGILATSSRL---TPEGYDQMMSTNYI 175
                        + L++        +    NNAG L     +   + EG+ + + TN  
Sbjct: 68  DEALH--------EALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLT 119

Query: 176 GAFFLTKLLLPLLKNSPVPSRIVNVTSF 203
            AF   K  +P +      S +   +SF
Sbjct: 120 SAFLAAKYQVPAIAALGGGS-LTFTSSF 146

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score = 88.4 bits (220), Expect = 3e-20
 Identities = 41/148 (27%), Positives = 72/148 (48%), Gaps = 19/148 (12%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V IVTGA+ G+G A A  L+R G  V+    +        A       + R     ++++
Sbjct: 30  VAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGR--GAVLNVN 87

Query: 121 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI----LATSSRLTPEGYDQMMSTNYI 175
              +V    + +L+++        ++ +L+NNAGI    LA   R+  + +D ++ TN  
Sbjct: 88  DATAVDALVESTLKEF-------GALNVLVNNAGITQDQLAM--RMKDDEWDAVIDTNLK 138

Query: 176 GAFFLTKLLL-PLLKNSPVPSRIVNVTS 202
             F L++ +L P++K      RIVN+TS
Sbjct: 139 AVFRLSRAVLRPMMKAR--GGRIVNITS 164

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score = 87.5 bits (218), Expect = 3e-20
 Identities = 31/147 (21%), Positives = 59/147 (40%), Gaps = 19/147 (12%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
             +VTGA  G+G A A  L+ +G  V++   ++       A I       +  A   D+S
Sbjct: 8   TALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI-----GKKARAIAADIS 62

Query: 121 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI----LATSSRLTPEGYDQMMSTNYI 175
              SV   F +              I +L+NNA I          +  + + +++  N  
Sbjct: 63  DPGSVKALFAEIQALT-------GGIDILVNNASIVPFVAWD--DVDLDHWRKIIDVNLT 113

Query: 176 GAFFLTKLLLPLLKNSPVPSRIVNVTS 202
           G F +T+     ++ +    R++++ S
Sbjct: 114 GTFIVTRAGTDQMRAAGKAGRVISIAS 140

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score = 87.0 bits (216), Expect = 4e-20
 Identities = 20/151 (13%), Positives = 42/151 (27%), Gaps = 30/151 (19%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETM----ADITSRNKDARLEAFQ 116
             IV G    LG+A      + G+ V+ +  S++  +++      +     ++  +    
Sbjct: 5   KVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVDGNKNWTEQEQSILEQT 64

Query: 117 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL---TPEGYDQMMSTN 173
                               +D         +   AG  A  S       +  D M+  +
Sbjct: 65  ASSLQGSQ------------VD--------GVFCVAGGWAGGSASSKDFVKNADLMIKQS 104

Query: 174 YIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT 204
              +    KL    LK       +    +  
Sbjct: 105 VWSSAIAAKLATTHLKPG---GLLQLTGAAA 132

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score = 88.5 bits (220), Expect = 4e-20
 Identities = 35/148 (23%), Positives = 61/148 (41%), Gaps = 14/148 (9%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDA---RLEAFQV 117
           V IVTG  +G+G A    L   G +VV+  R    L     ++ +        R+   Q 
Sbjct: 20  VAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQC 79

Query: 118 DLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYI 175
           ++ + + V     S        D    I  L+NN G   L+ +  ++ +G+  ++ TN  
Sbjct: 80  NIRNEEEVNNLVKSTL------DTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLT 133

Query: 176 GAFFLTKLLLP-LLKNSPVPSRIVNVTS 202
           G F++ K +    +K       IVN+  
Sbjct: 134 GTFYMCKAVYSSWMKEH--GGSIVNIIV 159

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score = 86.2 bits (214), Expect = 4e-20
 Identities = 26/146 (17%), Positives = 50/146 (34%), Gaps = 35/146 (23%)

Query: 63  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 122
           ++ GA+  LG+A    L ++   V+  GR S                       VD+++ 
Sbjct: 7   LLIGASGTLGSAVKERLEKKA-EVITAGRHS-------------------GDVTVDITNI 46

Query: 123 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGAFFL 180
            S+ K  + + +  +D         +++  G    +  + LTPE     +S+   G   L
Sbjct: 47  DSIKKMYEQVGK--VD--------AIVSATGSATFSPLTELTPEKNAVTISSKLGGQINL 96

Query: 181 TKLLLPLLKNSPVPSRIVNVTSFTHR 206
             L +  L +          T     
Sbjct: 97  VLLGIDSLNDK---GSFTLTTGIMME 119

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score = 86.8 bits (216), Expect = 6e-20
 Identities = 26/147 (17%), Positives = 40/147 (27%), Gaps = 22/147 (14%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
             IVT      G  +A  LS  G  V     S     E  A              Q+   
Sbjct: 3   TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAE--------TYPQLKPM 54

Query: 121 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI---LATSSRLTPEGYDQMMSTNYIG 176
           S Q   +  +     +         + +L++N           +   E Y   +    I 
Sbjct: 55  SEQEPAELIEAVTSAY-------GQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIR 107

Query: 177 AFFLTKLLLPL-LKNSPVPSRIVNVTS 202
            F L   +     K       I+ +TS
Sbjct: 108 PFALVNAVASQMKKRK--SGHIIFITS 132

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score = 86.6 bits (215), Expect = 8e-20
 Identities = 17/148 (11%), Positives = 35/148 (23%), Gaps = 24/148 (16%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
             +V G    LG+    A     + V  +    +  +              ++       
Sbjct: 9   RVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASA---------SVIVKMTDSFTE 59

Query: 121 SFQSVLKFKDSLQQWL-LDSDMHSSIQLLINNAGILATSSRL---TPEGYDQMMSTNYIG 176
               V      L     +D         ++  AG  A  +       +  D M   +   
Sbjct: 60  QADQVTAEVGKLLGDQKVD--------AILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWT 111

Query: 177 AFFLTKLLLPLLKNSPVPSRIVNVTSFT 204
           +   + L    LK       +    +  
Sbjct: 112 STISSHLATKHLKEG---GLLTLAGAKA 136

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score = 86.8 bits (216), Expect = 9e-20
 Identities = 35/163 (21%), Positives = 70/163 (42%), Gaps = 17/163 (10%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V +VTG + GLG   A  L+  G  VV+  R+    SE    +T         AF+ D+S
Sbjct: 23  VALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLT-EKYGVETMAFRCDVS 81

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAF 178
           +++ V K  ++++      +    +  ++N AGI     +     + + Q++  N  G +
Sbjct: 82  NYEEVKKLLEAVK------EKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTY 135

Query: 179 FLTKLLLP-LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITG 220
           ++ +     L ++      I+N+ S     +   +V    I+ 
Sbjct: 136 YVCREAFSLLRESD--NPSIINIGS-----LTVEEVTMPNISA 171

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score = 86.4 bits (215), Expect = 9e-20
 Identities = 35/147 (23%), Positives = 70/147 (47%), Gaps = 17/147 (11%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V +VTGA+ G+G   A+AL+ +G  VV    S     +    +  +   A      +++S
Sbjct: 7   VALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKA--RGLVLNIS 64

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI----LATSSRLTPEGYDQMMSTNYIG 176
             +S+  F   ++        + +I +L+NNAGI    L    R++ + +  +++TN   
Sbjct: 65  DIESIQNFFAEIK------AENLAIDILVNNAGITRDNLMM--RMSEDEWQSVINTNLSS 116

Query: 177 AFFLTKLLL-PLLKNSPVPSRIVNVTS 202
            F ++K  +  ++K      RI+++ S
Sbjct: 117 IFRMSKECVRGMMKKR--WGRIISIGS 141

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score = 86.0 bits (214), Expect = 1e-19
 Identities = 39/149 (26%), Positives = 71/149 (47%), Gaps = 20/149 (13%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSS-HLLSETMADITSRNKDARLEAFQVDL 119
             IVTG++ GLG A A+ L   G ++VL G  +   L  T  +  +   +      + D+
Sbjct: 7   TAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVV--VAKGDV 64

Query: 120 SSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI----LATSSRLTPEGYDQMMSTNY 174
            + + V    K ++  +         I +L+NNAGI    L    +++ + +D +++TN 
Sbjct: 65  KNPEDVENMVKTAMDAF-------GRIDILVNNAGITRDTLML--KMSEKDWDDVLNTNL 115

Query: 175 IGAFFLTKLLL-PLLKNSPVPSRIVNVTS 202
             A+  TK +   +LK      +I+N+TS
Sbjct: 116 KSAYLCTKAVSKIMLKQK--SGKIINITS 142

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score = 86.5 bits (215), Expect = 1e-19
 Identities = 32/152 (21%), Positives = 59/152 (38%), Gaps = 20/152 (13%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSS-------HLLSETMADITSRNKDARLE 113
              +TGA+ G+G A A   +R+G +V +  +S+         +    A + +        
Sbjct: 8   TLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQG--L 65

Query: 114 AFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMM 170
           A + D+     V      ++  +         I +L+NNA    L  +     + +D M 
Sbjct: 66  ALKCDIREEDQVRAAVAATVDTF-------GGIDILVNNASAIWLRGTLDTPMKRFDLMQ 118

Query: 171 STNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 202
             N  G+F   +  LP L  +P P  I+ +  
Sbjct: 119 QVNARGSFVCAQACLPHLLQAPNP-HILTLAP 149

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score = 85.7 bits (213), Expect = 2e-19
 Identities = 37/147 (25%), Positives = 58/147 (39%), Gaps = 15/147 (10%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
             IVTG   G+G A   A++  G +V ++ RS+    E    +  +    + +A+Q D+S
Sbjct: 16  TIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKV-GKEFGVKTKAYQCDVS 74

Query: 121 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI----LATSSRLTPEGYDQMMSTNYI 175
           +   V K  +               I  LI NAG+     AT   LT E +  +   N  
Sbjct: 75  NTDIVTKTIQQIDADL-------GPISGLIANAGVSVVKPAT--ELTHEDFAFVYDVNVF 125

Query: 176 GAFFLTKLLLPLLKNSPVPSRIVNVTS 202
           G F   + +  L         IV  +S
Sbjct: 126 GVFNTCRAVAKLWLQKQQKGSIVVTSS 152

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score = 85.7 bits (213), Expect = 3e-19
 Identities = 24/147 (16%), Positives = 62/147 (42%), Gaps = 15/147 (10%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V  VTG++ G+G A A A ++ G  V +   S     +      +    ++  A++ ++S
Sbjct: 36  VASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSK--AYKCNIS 93

Query: 121 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI----LATSSRLTPEGYDQMMSTNYI 175
             +SV +      + +        +I + + NAG+             + +++++S +  
Sbjct: 94  DPKSVEETISQQEKDF-------GTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLN 146

Query: 176 GAFFLTKLLLPLLKNSPVPSRIVNVTS 202
           G ++ +  +  + K +     ++  +S
Sbjct: 147 GVYYCSHNIGKIFKKNG-KGSLIITSS 172

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score = 84.8 bits (211), Expect = 4e-19
 Identities = 40/148 (27%), Positives = 63/148 (42%), Gaps = 15/148 (10%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V IVTGA+SG G A A      G  V  +  S+  L ET           ++   + D++
Sbjct: 4   VAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHW-HAYADKVLRVRADVA 62

Query: 121 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS-----RLTPEGYDQMMSTNY 174
               V      +++Q+        +I +L+NNAGI   S          E +D++M+ N 
Sbjct: 63  DEGDVNAAIAATMEQF-------GAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNV 115

Query: 175 IGAFFLTKLLLPLLKNSPVPSRIVNVTS 202
            G F   + +LP +        IVN+ S
Sbjct: 116 RGIFLGCRAVLPHMLLQG-AGVIVNIAS 142

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score = 84.1 bits (209), Expect = 5e-19
 Identities = 28/146 (19%), Positives = 57/146 (39%), Gaps = 20/146 (13%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
             ++TGA  G+G A     ++EG  +V        L E    + +           +D++
Sbjct: 7   AVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAH-------PVVMDVA 59

Query: 121 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGA 177
              SV + F ++L            +  +++ AGI       ++  E ++ ++  N  G+
Sbjct: 60  DPASVERGFAEALAHL-------GRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGS 112

Query: 178 FFLTKLLL-PLLKNSPVPSRIVNVTS 202
           F + K     + + +  P  IV   S
Sbjct: 113 FLVAKAASEAMREKN--PGSIVLTAS 136

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score = 84.5 bits (210), Expect = 5e-19
 Identities = 37/150 (24%), Positives = 59/150 (39%), Gaps = 21/150 (14%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V ++TGA SG G   A   ++ G  VV+V R          +I          A   D+S
Sbjct: 11  VALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI-----GDAALAVAADIS 65

Query: 121 SFQSVLKFKDSLQQWLLDS--DMHSSIQLLINNAGILATSSRL---TPEGYDQMMSTNYI 175
               V           +++       + +L+NNAGI           PE +D+++  N  
Sbjct: 66  KEADV--------DAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVR 117

Query: 176 GAFFLTKLLLPLLKNS---PVPSRIVNVTS 202
           G + +T  L+P  K +        I+NV S
Sbjct: 118 GVYLMTSKLIPHFKENGAKGQECVILNVAS 147

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score = 83.7 bits (208), Expect = 7e-19
 Identities = 41/149 (27%), Positives = 75/149 (50%), Gaps = 20/149 (13%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVL-VGRSSHLLSETMADITSRNKDARLEAFQVDL 119
           V +VTGA+ G+G A A  L+++G +VV+    +    +E + +I     DA   A + D+
Sbjct: 6   VALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAI--AVRADV 63

Query: 120 SSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI----LATSSRLTPEGYDQMMSTNY 174
           ++ + V    K ++  +         + +L+NNAG+    L    R+  E +D +++TN 
Sbjct: 64  ANAEDVTNMVKQTVDVF-------GQVDILVNNAGVTKDNLLM--RMKEEEWDTVINTNL 114

Query: 175 IGAFFLTKLLL-PLLKNSPVPSRIVNVTS 202
            G F  TK +   +++      RIVN+ S
Sbjct: 115 KGVFLCTKAVSRFMMRQR--HGRIVNIAS 141

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score = 83.7 bits (208), Expect = 7e-19
 Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 20/150 (13%)

Query: 60  PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS-HLLSETMADITSRNKDARLEAFQVD 118
           PV +VTGA+ G+G A A +L + G  V++    S     E    I +    A    F  D
Sbjct: 2   PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAI--TFGGD 59

Query: 119 LSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI----LATSSRLTPEGYDQMMSTN 173
           +S    V    K ++  W        +I +++NNAGI    L    R+    +D+++  N
Sbjct: 60  VSKEADVEAMMKTAIDAW-------GTIDVVVNNAGITRDTLLI--RMKKSQWDEVIDLN 110

Query: 174 YIGAFFLTKLLL-PLLKNSPVPSRIVNVTS 202
             G F  T+     ++K      RI+N+ S
Sbjct: 111 LTGVFLCTQAATKIMMKKR--KGRIINIAS 138

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score = 83.3 bits (207), Expect = 9e-19
 Identities = 27/149 (18%), Positives = 48/149 (32%), Gaps = 24/149 (16%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           + +VT A    G AA  AL+++G+ VV    S    +E              E       
Sbjct: 3   IALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQR--------FESENPGTIAL 54

Query: 121 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI-----LATSSRLTPEGYDQMMSTNY 174
           + Q   +    +LQ          +I  +++N  I            +     QM     
Sbjct: 55  AEQKPERLVDATLQHG-------EAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALS 107

Query: 175 IGAFFLTKLLLP-LLKNSPVPSRIVNVTS 202
           I    L +  +  L       + ++ +TS
Sbjct: 108 IFPILLLQSAIAPLRAAG--GASVIFITS 134

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score = 84.2 bits (209), Expect = 1e-18
 Identities = 37/150 (24%), Positives = 52/150 (34%), Gaps = 22/150 (14%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V ++TG  SGLG A       EG  V ++ +S+  L E                   D+ 
Sbjct: 7   VALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH-----GGNAVGVVGDVR 61

Query: 121 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL-------TPEGYDQMMST 172
           S Q   +  +  L  +         I  LI NAGI   S+ L           +D +   
Sbjct: 62  SLQDQKRAAERCLAAF-------GKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHV 114

Query: 173 NYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 202
           N  G     K  LP L +S     +V   S
Sbjct: 115 NVKGYIHAVKACLPALVSS--RGSVVFTIS 142

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score = 83.4 bits (207), Expect = 1e-18
 Identities = 34/148 (22%), Positives = 51/148 (34%), Gaps = 29/148 (19%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
              VTGA  G+G A A A    G  V               D     +        +D++
Sbjct: 9   NVWVTGAGKGIGYATALAFVEAGAKVTG------------FDQAFTQEQYPFATEVMDVA 56

Query: 121 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGA 177
               V +  +  L +          +  L+N AGIL   +  +L+ E + Q  + N  GA
Sbjct: 57  DAAQVAQVCQRLLAET-------ERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGA 109

Query: 178 FFLTKLLLPLLKNSPVPSR---IVNVTS 202
           F L +  +          R   IV V S
Sbjct: 110 FNLFQQTMNQF----RRQRGGAIVTVAS 133

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score = 83.3 bits (207), Expect = 1e-18
 Identities = 37/149 (24%), Positives = 70/149 (46%), Gaps = 20/149 (13%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVL-VGRSSHLLSETMADITSRNKDARLEAFQVDL 119
             +VTGA+ G+G + A  L+ EG++V +    S       + +I ++  D+   A Q ++
Sbjct: 6   SALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSF--AIQANV 63

Query: 120 SSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI----LATSSRLTPEGYDQMMSTNY 174
           +    V    K+ + Q+        S+ +L+NNAGI    L    R+  + +D ++ TN 
Sbjct: 64  ADADEVKAMIKEVVSQF-------GSLDVLVNNAGITRDNLLM--RMKEQEWDDVIDTNL 114

Query: 175 IGAFFLTKLLL-PLLKNSPVPSRIVNVTS 202
            G F   +     +L+       I+N++S
Sbjct: 115 KGVFNCIQKATPQMLRQR--SGAIINLSS 141

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score = 83.4 bits (207), Expect = 1e-18
 Identities = 35/148 (23%), Positives = 64/148 (43%), Gaps = 16/148 (10%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
             ++T  T GLG      L  +G+ V +   S     ETM +   ++ + RL+  Q D++
Sbjct: 9   HALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKET-YKDVEERLQFVQADVT 67

Query: 121 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATS----SRLTPEGYDQMMSTNYI 175
             + + K  ++++  +         I  LINNAG              + +++M+  N  
Sbjct: 68  KKEDLHKIVEEAMSHF-------GKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLT 120

Query: 176 GAFFLTKLLLP-LLKNSPVPSRIVNVTS 202
             F L KL++P + K +    RI+N   
Sbjct: 121 AVFHLLKLVVPVMRKQN--FGRIINYGF 146

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score = 83.3 bits (207), Expect = 1e-18
 Identities = 39/147 (26%), Positives = 72/147 (48%), Gaps = 16/147 (10%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V +VTG+T G+G A A  L+  G  V++ G S         +I +     +    +++L 
Sbjct: 9   VSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEI-ANKYGVKAHGVEMNLL 67

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI----LATSSRLTPEGYDQMMSTNYIG 176
           S +S+ K  + +       ++   I +L+NNAGI    L    R++   +++++  N  G
Sbjct: 68  SEESINKAFEEIY------NLVDGIDILVNNAGITRDKLFL--RMSLLDWEEVLKVNLTG 119

Query: 177 AFFLTKLLL-PLLKNSPVPSRIVNVTS 202
            F +T+  L  ++K      RIVN++S
Sbjct: 120 TFLVTQNSLRKMIKQR--WGRIVNISS 144

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score = 83.8 bits (208), Expect = 1e-18
 Identities = 39/147 (26%), Positives = 72/147 (48%), Gaps = 18/147 (12%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           VCIVTG  SG+G A A   ++ G +VV+   +         +I      ++    +VD+S
Sbjct: 29  VCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI-----GSKAFGVRVDVS 83

Query: 121 SFQSVLKFKDSLQQWLLDS--DMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIG 176
           S +          + +++        + +L+NNAG   T +   +  E +D++MS N  G
Sbjct: 84  SAKDA--------ESMVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKG 135

Query: 177 AFFLTKLLLPLLKNSPVPSRIVNVTSF 203
            F  +K ++P+++ +   S I+N TS+
Sbjct: 136 IFLCSKYVIPVMRRNGGGS-IINTTSY 161

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score = 83.4 bits (207), Expect = 2e-18
 Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 20/149 (13%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVL-VGRSSHLLSETMADITSRNKDARLEAFQVDL 119
           + +VTGA+ G+G A A  L+  G  V +    S+    E +A I +   +A   A + D+
Sbjct: 30  IALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAF--AVKADV 87

Query: 120 SSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI----LATSSRLTPEGYDQMMSTNY 174
           S    V   F   +++W         + +L+NNAGI    L    R+  + +  ++  N 
Sbjct: 88  SQESEVEALFAAVIERW-------GRLDVLVNNAGITRDTLLL--RMKRDDWQSVLDLNL 138

Query: 175 IGAFFLTKLLL-PLLKNSPVPSRIVNVTS 202
            G F  ++     +LK      RI+N+ S
Sbjct: 139 GGVFLCSRAAAKIMLKQR--SGRIINIAS 165

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score = 83.0 bits (206), Expect = 2e-18
 Identities = 31/149 (20%), Positives = 52/149 (34%), Gaps = 15/149 (10%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V  +TG+ SG+GAA    L+R G  V+ + R     ++  AD+++     R  A    L 
Sbjct: 3   VIAITGSASGIGAALKELLARAGHTVIGIDRGQ---ADIEADLSTP--GGRETAVAAVLD 57

Query: 121 SFQSVLKFKDSLQQWLLDS--DMHSSIQLLINNAGILATSS----RLTPEGYDQMMSTNY 174
               VL   D L           +S + + +N  G+ A        L+       +    
Sbjct: 58  RCGGVL---DGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGS 114

Query: 175 IGAFFLTKLLLPLLKNSPVPSRIVNVTSF 203
           I A       LP+++              
Sbjct: 115 IAATQPGAAELPMVEAML-AGDEARAIEL 142

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score = 83.0 bits (206), Expect = 2e-18
 Identities = 29/145 (20%), Positives = 50/145 (34%), Gaps = 24/145 (16%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V +VTGA  G+G A   AL   G  V +  R+   ++  +                 DL 
Sbjct: 30  VALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAADL-------------HLPGDLR 76

Query: 121 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGA 177
                                    + +++NNAG+++       T   +   +  N    
Sbjct: 77  EAAYADGLPGAVAAGL-------GRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAP 129

Query: 178 FFLTKLLLPLLKNSPVPSRIVNVTS 202
           F + +  +PL+  +     IVNV S
Sbjct: 130 FRICRAAIPLMAAAGG-GAIVNVAS 153

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score = 82.9 bits (206), Expect = 2e-18
 Identities = 36/146 (24%), Positives = 55/146 (37%), Gaps = 21/146 (14%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
             +VTG   G+G A A A +REG  V L         E    I           FQVDL 
Sbjct: 8   GVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGK-EVAEAIGGA-------FFQVDLE 59

Query: 121 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGA 177
             +  ++  +++             + +L+NNA I A  S   +    + +++  N    
Sbjct: 60  DERERVRFVEEAAYAL-------GRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAP 112

Query: 178 FFLTKLLLP-LLKNSPVPSRIVNVTS 202
             L+ L    + K       IVNV S
Sbjct: 113 MHLSALAAREMRKVG--GGAIVNVAS 136

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score = 82.5 bits (205), Expect = 2e-18
 Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 20/147 (13%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V +VTGA+ G+G A A  L+  G  V+    S          +    K        ++++
Sbjct: 11  VALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGK-----GMALNVT 65

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI----LATSSRLTPEGYDQMMSTNYIG 176
           + +S+     ++       D    + +L+NNAGI    L    R+  E +  +M TN   
Sbjct: 66  NPESIEAVLKAIT------DEFGGVDILVNNAGITRDNLLM--RMKEEEWSDIMETNLTS 117

Query: 177 AFFLTKLLL-PLLKNSPVPSRIVNVTS 202
            F L+K +L  ++K      RI+NV S
Sbjct: 118 IFRLSKAVLRGMMKKR--QGRIINVGS 142

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score = 82.4 bits (204), Expect = 3e-18
 Identities = 42/230 (18%), Positives = 77/230 (33%), Gaps = 47/230 (20%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           + +++G  +G+GAA    L   G  +V +       +E +AD+++   + R +A    L+
Sbjct: 3   IIVISGCATGIGAATRKVLEAAGHQIVGIDIRD---AEVIADLSTA--EGRKQAIADVLA 57

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFL 180
                                   +  L+  AG+   +  L       ++S NY GA  L
Sbjct: 58  KC-------------------SKGMDGLVLCAGLGPQTKVL-----GNVVSVNYFGATEL 93

Query: 181 TKLLLPLLKNSPVPSRIVNVTS--------FTHRNVFNAQVNNETITGKFFLRSKCYPCA 232
               LP LK    P+  V ++S          +      +   E         +      
Sbjct: 94  MDAFLPALKKGHQPA-AVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGN 152

Query: 233 RIYEYSKLCLLIFSYELHRNLGLDKSRH---VSVIAADPGVVKTNIMREV 279
             Y  SK  L +      R            ++ IA  PG  +T +++  
Sbjct: 153 LAYAGSKNALTVAV----RKRAAAWGEAGVRLNTIA--PGATETPLLQAG 196

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score = 82.1 bits (204), Expect = 3e-18
 Identities = 33/149 (22%), Positives = 62/149 (41%), Gaps = 19/149 (12%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVL-VGRSSHLLSETMADITSRNKDARLEAFQVDL 119
             ++TGA+ G+G A A  L+ +GF + +  G++     E   +   R     +     +L
Sbjct: 3   KALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPL-VAVLGANL 61

Query: 120 SSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI----LATSSRLTPEGYDQMMSTNY 174
              ++       + +           +  L+NNAGI    L    R+  E ++ ++  N 
Sbjct: 62  LEAEAATALVHQAAEVL-------GGLDTLVNNAGITRDTLLV--RMKDEDWEAVLEANL 112

Query: 175 IGAFFLTKLLL-PLLKNSPVPSRIVNVTS 202
              F  T+  +  ++K      RIVN+TS
Sbjct: 113 SAVFRTTREAVKLMMKAR--FGRIVNITS 139

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score = 83.0 bits (206), Expect = 3e-18
 Identities = 36/157 (22%), Positives = 57/157 (36%), Gaps = 26/157 (16%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSE------TMADITSRNKDARLEA 114
             +VTG  SG+G AAA A +REG  V +     +L +E        A I    + A    
Sbjct: 51  KALVTGGDSGIGRAAAIAYAREGADVAIN----YLPAEEEDAQQVKALIEECGRKA--VL 104

Query: 115 FQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL---TPEGYDQMM 170
              DLS           + +           + +L   AG       +   T E + Q  
Sbjct: 105 LPGDLSDESFARSLVHKAREAL-------GGLDILALVAGKQTAIPEIKDLTSEQFQQTF 157

Query: 171 STNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRN 207
           + N    F++T+  +PLL      + I+  +S     
Sbjct: 158 AVNVFALFWITQEAIPLLPKG---ASIITTSSIQAYQ 191

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score = 82.6 bits (205), Expect = 3e-18
 Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 14/146 (9%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH-LLSETMADITSRNKDARLEAFQVDL 119
           V  VTG   GLGAA +  L   G  V +     +  +S  +       +D +  A+ VD+
Sbjct: 27  VAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFK--AYAVDV 84

Query: 120 SSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGA 177
           + F+S  +  + +            + +LINNAGI   AT  ++T   +D +M T+    
Sbjct: 85  ADFESCERCAEKVL------ADFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAM 138

Query: 178 FFLTKLLL-PLLKNSPVPSRIVNVTS 202
           F +TK  +  +++      RIVN+ S
Sbjct: 139 FNVTKQFIAGMVERR--FGRIVNIGS 162

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score = 82.6 bits (205), Expect = 3e-18
 Identities = 35/145 (24%), Positives = 67/145 (46%), Gaps = 23/145 (15%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V IVTG +SG+G A   AL R G  VV               +  ++     + F++D++
Sbjct: 16  VAIVTGGSSGIGLAVVDALVRYGAKVVS------------VSLDEKSDVNVSDHFKIDVT 63

Query: 121 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGA 177
           + + V +  + + +++         I +L+NNAGI   S       E + +++  N  G+
Sbjct: 64  NEEEVKEAVEKTTKKY-------GRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGS 116

Query: 178 FFLTKLLLPLLKNSPVPSRIVNVTS 202
           + + K  +P++      S I+N+ S
Sbjct: 117 YLMAKYTIPVMLAIGHGS-IINIAS 140

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score = 82.2 bits (204), Expect = 3e-18
 Identities = 35/146 (23%), Positives = 64/146 (43%), Gaps = 26/146 (17%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V IVTGA+ G+G A A     EG  V+               I     +A+ +  + D++
Sbjct: 10  VVIVTGASMGIGRAIAERFVDEGSKVID------------LSI-HDPGEAKYDHIECDVT 56

Query: 121 SFQSVLKFKDSLQQWLLDS--DMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIG 176
           +   V        +  +D     + SI +L+NNAGI +      ++   + +++  N  G
Sbjct: 57  NPDQV--------KASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFG 108

Query: 177 AFFLTKLLLPLLKNSPVPSRIVNVTS 202
            ++ +K  +P +  S     IVN++S
Sbjct: 109 YYYASKFAIPYMIRSR-DPSIVNISS 133

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score = 82.2 bits (204), Expect = 3e-18
 Identities = 41/147 (27%), Positives = 67/147 (45%), Gaps = 20/147 (13%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
             +VTGAT G+G A A     +G  V L G     L E  AD+        +  F  +LS
Sbjct: 29  KALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL-----GKDVFVFSANLS 83

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI----LATSSRLTPEGYDQMMSTNYIG 176
             +S+ +  +  +           I +L+NNAGI    L    R+  + +D +++ N   
Sbjct: 84  DRKSIKQLAEVAE------REMEGIDILVNNAGITRDGLFV--RMQDQDWDDVLAVNLTA 135

Query: 177 AFFLTKLLL-PLLKNSPVPSRIVNVTS 202
           A  LT+ L+  +++      RI+N+TS
Sbjct: 136 ASTLTRELIHSMMRRR--YGRIINITS 160

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287

 Score = 82.3 bits (204), Expect = 4e-18
 Identities = 30/156 (19%), Positives = 60/156 (38%), Gaps = 27/156 (17%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLV------------GRSSHLLSETMADITSRNK 108
           V +VTG   G G + A  L+ EG  ++L               +S  L E   ++     
Sbjct: 12  VVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEV--EKT 69

Query: 109 DARLEAFQVDLSSFQSVLK-FKDSLQQW-LLDSDMHSSIQLLINNAGILATSSRLTPEGY 166
             +    +VD+    +V +   +++ ++  LD        +++ NAGI    + L  + +
Sbjct: 70  GRKAYTAEVDVRDRAAVSRELANAVAEFGKLD--------VVVANAGICPLGAHLPVQAF 121

Query: 167 DQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 202
                 +++G        LP L +    + I+   S
Sbjct: 122 ADAFDVDFVGVINTVHAALPYLTSG---ASIITTGS 154

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score = 81.0 bits (201), Expect = 8e-18
 Identities = 32/145 (22%), Positives = 60/145 (41%), Gaps = 20/145 (13%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V I+T A  G+G AAA A +REG  V+    +   L E         K   ++   +D++
Sbjct: 8   VIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQEL-------EKYPGIQTRVLDVT 60

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGAF 178
             + + +F +              + +L N AG +   +      + +D  M+ N    +
Sbjct: 61  KKKQIDQFANE----------VERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMY 110

Query: 179 FLTKLLLPLLKNSPVPSRIVNVTSF 203
            + K  LP +      + I+N++S 
Sbjct: 111 LMIKAFLPKMLAQKSGN-IINMSSV 134

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score = 81.1 bits (201), Expect = 9e-18
 Identities = 34/148 (22%), Positives = 59/148 (39%), Gaps = 21/148 (14%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V +VTG   G+GA    A    G  VV+  +          ++      A       D++
Sbjct: 11  VVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL----PGAV--FILCDVT 64

Query: 121 SFQSVLKFKDSLQQWLLDS--DMHSSIQLLINNAGILATSSRL---TPEGYDQMMSTNYI 175
               V        + L+         +  ++NNAG      R    + +G+ Q++  N +
Sbjct: 65  QEDDV--------KTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLL 116

Query: 176 GAFFLTKLLLPLLKNSPVPSRIVNVTSF 203
           G + LTKL LP L+ S     ++N++S 
Sbjct: 117 GTYTLTKLALPYLRKS--QGNVINISSL 142

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score = 81.0 bits (201), Expect = 1e-17
 Identities = 37/149 (24%), Positives = 63/149 (42%), Gaps = 20/149 (13%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V I+TGA  G+G   +  L+R G  VVL       L+   A +             VDL+
Sbjct: 13  VAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV-----GRGAVHHVVDLT 67

Query: 121 SFQSVLKFKDSLQQWLLDS--DMHSSIQLLINNAGILATSS----RLTPEGYDQMMSTNY 174
           +  SV        + L+D   D    + ++ NNA     +     ++T + +D   + N 
Sbjct: 68  NEVSV--------RALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNA 119

Query: 175 IGAFFLTKLLLPLLKNSPVPSRIVNVTSF 203
            G   + K  +P L ++   + IVN++S 
Sbjct: 120 RGTMLMCKYAIPRLISAGGGA-IVNISSA 147

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score = 80.6 bits (200), Expect = 1e-17
 Identities = 33/144 (22%), Positives = 58/144 (40%), Gaps = 14/144 (9%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
             I+TG   GLGA AA      G  VVL        + T  ++             +D++
Sbjct: 7   TVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL-----GDAARYQHLDVT 61

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGAF 178
             +   +     +      +   S+  L+NNAGI         + E + +++  N  G F
Sbjct: 62  IEEDWQRVVAYAR------EEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVF 115

Query: 179 FLTKLLLPLLKNSPVPSRIVNVTS 202
              K ++P +K++     IVN++S
Sbjct: 116 IGMKTVIPAMKDAG-GGSIVNISS 138

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score = 81.2 bits (201), Expect = 1e-17
 Identities = 36/181 (19%), Positives = 58/181 (32%), Gaps = 34/181 (18%)

Query: 55  TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS-HLLSETMADITSRNKDARLE 113
           T    PV +VTGA   LG + A  L  EG+ V L    S    +   A + +R  +    
Sbjct: 5   TAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPN-SAI 63

Query: 114 AFQVDLSSFQSVLKFKDSLQQWLLDSDM-----------HSSIQLLINNAGIL--ATSSR 160
             Q DLS+  +           +                     +L+NNA         R
Sbjct: 64  TVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLR 123

Query: 161 LTPEGYD--------------QMMSTNYIGAFFLTKLLLPLLKNSPVPS-----RIVNVT 201
              +G++               +  +N I  +FL K     +  +P         I+N+ 
Sbjct: 124 NDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMV 183

Query: 202 S 202
            
Sbjct: 184 D 184

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score = 80.3 bits (199), Expect = 2e-17
 Identities = 33/146 (22%), Positives = 65/146 (44%), Gaps = 14/146 (9%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH-LLSETMADITSRNKDARLEAFQVDL 119
           +  VTG   G+G +    L ++GF VV     +     + + D  +   D    A + ++
Sbjct: 15  IAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFY--ASEGNV 72

Query: 120 SSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGA 177
             + S  +  D ++           I +L+NNAGI       ++T E +  ++ TN    
Sbjct: 73  GDWDSTKQAFDKVK------AEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSL 126

Query: 178 FFLTKLLL-PLLKNSPVPSRIVNVTS 202
           F +TK ++  +++      RI+N++S
Sbjct: 127 FNVTKQVIDGMVERG--WGRIINISS 150

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score = 82.3 bits (204), Expect = 2e-17
 Identities = 33/149 (22%), Positives = 63/149 (42%), Gaps = 23/149 (15%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V +VTGA  G+GA  A   +R+G  VV +            D+          A  +D++
Sbjct: 215 VAVVTGAARGIGATIAEVFARDGATVVAIDV-----DGAAEDLKRVADKVGGTALTLDVT 269

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI-----LATSSRLTPEGYDQMMSTNYI 175
           +  +V K    + +          + +L+NNAGI     LA    +  + +D +++ N +
Sbjct: 270 ADDAVDKITAHVTE-----HHGGKVDILVNNAGITRDKLLA---NMDEKRWDAVIAVNLL 321

Query: 176 GAFFLTKLLLP--LLKNSPVPSRIVNVTS 202
               LT+ L+    +       R++ ++S
Sbjct: 322 APQRLTEGLVGNGTIGEGG---RVIGLSS 347

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278

 Score = 80.3 bits (199), Expect = 2e-17
 Identities = 32/155 (20%), Positives = 62/155 (40%), Gaps = 24/155 (15%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLV------------GRSSHLLSETMADITSRNK 108
           V  +TGA  G G A A  L+ +G  ++ V              +   L+ T+  +   + 
Sbjct: 15  VAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLV--EDI 72

Query: 109 DARLEAFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYD 167
            +R+ A Q D+   +S+    +  L +          + +++ NAGI         +G+ 
Sbjct: 73  GSRIVARQADVRDRESLSAALQAGLDEL-------GRLDIVVANAGI--APMSAGDDGWH 123

Query: 168 QMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 202
            ++  N  G +   K+ +P L        IV ++S
Sbjct: 124 DVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISS 158

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score = 79.9 bits (198), Expect = 2e-17
 Identities = 31/147 (21%), Positives = 63/147 (42%), Gaps = 24/147 (16%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
             ++TGA+SG+G+A A  L + G  V++ G +   L      +              +L+
Sbjct: 16  TSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYT-----IEVCNLA 70

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI----LATSSRLTPEGYDQMMSTNYIG 176
           + +                   S++ +L+ NAGI    LA   R+  + +D+++  N   
Sbjct: 71  NKEECSNLISK----------TSNLDILVCNAGITSDTLAI--RMKDQDFDKVIDINLKA 118

Query: 177 AFFLTKLLL-PLLKNSPVPSRIVNVTS 202
            F L +  +  +++      RI+N++S
Sbjct: 119 NFILNREAIKKMIQKR--YGRIINISS 143

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score = 80.9 bits (200), Expect = 2e-17
 Identities = 36/181 (19%), Positives = 58/181 (32%), Gaps = 34/181 (18%)

Query: 55  TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS-HLLSETMADITSRNKDARLE 113
           T    PV +VTGA   LG + A  L  EG+ V L    S    +   A + +R  +    
Sbjct: 42  TAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPN-SAI 100

Query: 114 AFQVDLSSFQSVLKFKDSLQQWLLDSDM-----------HSSIQLLINNAGIL--ATSSR 160
             Q DLS+  +           +                     +L+NNA         R
Sbjct: 101 TVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLR 160

Query: 161 LTPEGYD--------------QMMSTNYIGAFFLTKLLLPLLKNSPVPS-----RIVNVT 201
              +G++               +  +N I  +FL K     +  +P         I+N+ 
Sbjct: 161 NDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMV 220

Query: 202 S 202
            
Sbjct: 221 D 221

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score = 79.9 bits (198), Expect = 2e-17
 Identities = 34/162 (20%), Positives = 59/162 (36%), Gaps = 17/162 (10%)

Query: 61  VCIVTGA--TSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVD 118
           V +VTGA    G+G  AA   +  G  V +   S    +E       +    + +A++  
Sbjct: 22  VVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQ 81

Query: 119 LSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYI 175
           + S++S  K  KD +  +         I   I NAG  A S     + E ++ ++  +  
Sbjct: 82  VDSYESCEKLVKDVVADF-------GQIDAFIANAGATADSGILDGSVEAWNHVVQVDLN 134

Query: 176 GAFFLTKLLL-PLLKNSPVPSRIVNVTSF--THRNVFNAQVN 214
           G F   K +     +       +V   S      N    Q +
Sbjct: 135 GTFHCAKAVGHHFKERG--TGSLVITASMSGHIANFPQEQTS 174

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score = 79.4 bits (197), Expect = 3e-17
 Identities = 26/145 (17%), Positives = 55/145 (37%), Gaps = 22/145 (15%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
             +VTG + G+G A A AL   G+ V +  R+    +++                  DL 
Sbjct: 4   KALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQS----------LGAVPLPTDLE 53

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAF 178
                   K +L+           + +L++ A +     +  L+ E + +++  +   AF
Sbjct: 54  KDDPKGLVKRALEAL-------GGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAF 106

Query: 179 FLTKLLLP-LLKNSPVPSRIVNVTS 202
            L +   P + +      R++ + S
Sbjct: 107 LLAQAAAPHMAEAG--WGRVLFIGS 129

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score = 79.9 bits (198), Expect = 3e-17
 Identities = 40/149 (26%), Positives = 64/149 (42%), Gaps = 24/149 (16%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V IVTGA +G+G A A  L+ EG HV+               I          A +VD+S
Sbjct: 31  VAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI-----GCGAAACRVDVS 85

Query: 121 SFQSVLKFKDSLQQWLLDS--DMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIG 176
             Q +          ++D+       +  L+ NAG++  +S    T E +D++++ N  G
Sbjct: 86  DEQQI--------IAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRG 137

Query: 177 AFFLTKLLLPLLKNSPVPSR---IVNVTS 202
           A+  TK   P +           IVN++S
Sbjct: 138 AWLCTKHAAPRMI----ERGGGAIVNLSS 162

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317

 Score = 80.4 bits (199), Expect = 3e-17
 Identities = 35/157 (22%), Positives = 65/157 (41%), Gaps = 24/157 (15%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHL------------LSETMADITSRNK 108
           V  +TGA  G G   A  L+++G  +V +                  L ET+  +    +
Sbjct: 48  VAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLV--EEQ 105

Query: 109 DARLEAFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEG 165
             R+ A Q D+    S+     ++L ++         I +L++N GI        LT + 
Sbjct: 106 GRRIIARQADVRDLASLQAVVDEALAEF-------GHIDILVSNVGISNQGEVVSLTDQQ 158

Query: 166 YDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 202
           +  ++ TN IGA+   + +LP +        ++ V+S
Sbjct: 159 WSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSS 195

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score = 79.1 bits (196), Expect = 4e-17
 Identities = 34/149 (22%), Positives = 57/149 (38%), Gaps = 26/149 (17%)

Query: 56  GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAF 115
           GI+    +V  A+ G+G A A  LS+EG  V +  R+  LL  +                
Sbjct: 16  GIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGH-----------RYV 64

Query: 116 QVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTN 173
             DL     +L             +    + +L+ NAG         LT E + + + + 
Sbjct: 65  VCDLRKDLDLLF------------EKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSL 112

Query: 174 YIGAFFLTKLLLPLLKNSPVPSRIVNVTS 202
           ++    + +  LP +K      RIV +TS
Sbjct: 113 FLNMIKIVRNYLPAMKEKGWG-RIVAITS 140

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score = 79.1 bits (196), Expect = 5e-17
 Identities = 32/158 (20%), Positives = 63/158 (39%), Gaps = 25/158 (15%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLV-------------GRSSHLLSETMADITSRN 107
           V  +TGA  G G + A  L+ EG  ++                 S   L ET   +   +
Sbjct: 17  VAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLV--ED 74

Query: 108 KDARLEAFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPE 164
           +  +     +D+    ++ +   D ++Q+         + +++ NAG+L       LT E
Sbjct: 75  QGRKALTRVLDVRDDAALRELVADGMEQF-------GRLDVVVANAGVLSWGRVWELTDE 127

Query: 165 GYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 202
            +D ++  N  G +   +  +P +  +     IV V+S
Sbjct: 128 QWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSS 165

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277

 Score = 79.1 bits (196), Expect = 6e-17
 Identities = 38/159 (23%), Positives = 62/159 (38%), Gaps = 27/159 (16%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLV-------------GRSSHLLSETMADITSRN 107
           V  +TGA  G G A A  ++ EG  ++ V               S   LSET+  +    
Sbjct: 13  VAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLV--EA 70

Query: 108 KDARLEAFQVDLSSFQSVLK-FKDSLQQW-LLDSDMHSSIQLLINNAGILATSS--RLTP 163
            + R+ A  VD   F  + K   D +     LD        +++ NAG+ A  +   +TP
Sbjct: 71  ANRRIVAAVVDTRDFDRLRKVVDDGVAALGRLD--------IIVANAGVAAPQAWDDITP 122

Query: 164 EGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 202
           E +  +M  N  G +       P +        I+ ++S
Sbjct: 123 EDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISS 161

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score = 78.4 bits (194), Expect = 6e-17
 Identities = 33/148 (22%), Positives = 60/148 (40%), Gaps = 30/148 (20%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
             +VTG   G+G A A A +  G  V +  RS                     A + D++
Sbjct: 23  SVLVTGGNRGIGLAIARAFADAGDKVAITYRSG-------------EPPEGFLAVKCDIT 69

Query: 121 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI----LATSSRLTPEGYDQMMSTNYI 175
             + V + +K+  +           +++LI NAG+    L    R++ E +  ++ TN  
Sbjct: 70  DTEQVEQAYKEIEETH-------GPVEVLIANAGVTKDQLLM--RMSEEDFTSVVETNLT 120

Query: 176 GAFFLTKLLL-PLLKNSPVPSRIVNVTS 202
           G F + K     +L+      R+V ++S
Sbjct: 121 GTFRVVKRANRAMLRAK--KGRVVLISS 146

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score = 77.6 bits (192), Expect = 1e-16
 Identities = 31/148 (20%), Positives = 62/148 (41%), Gaps = 30/148 (20%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
             +VTG   G+G A A  L+ +G  V +  R S                  L   +VD++
Sbjct: 17  SVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGS-------------GAPKGLFGVEVDVT 63

Query: 121 SFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGI----LATSSRLTPEGYDQMMSTNYI 175
              +V + F    +           +++L++NAG+         R+T E ++++++ N  
Sbjct: 64  DSDAVDRAFTAVEEHQ-------GPVEVLVSNAGLSADAFLM--RMTEEKFEKVINANLT 114

Query: 176 GAFFLTKLLL-PLLKNSPVPSRIVNVTS 202
           GAF + +     + +N     R++ + S
Sbjct: 115 GAFRVAQRASRSMQRNK--FGRMIFIGS 140

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291

 Score = 78.0 bits (193), Expect = 2e-16
 Identities = 33/147 (22%), Positives = 57/147 (38%), Gaps = 17/147 (11%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHL-LSETMADITSRNKDARLEAFQVDL 119
             ++TG  SG+G A + A ++EG ++ +         +ET   +        L     DL
Sbjct: 49  NVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVL--LPGDL 106

Query: 120 SSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGILATS---SRLTPEGYDQMMSTNYI 175
           S  Q      +++++Q         S+ +L+NN            +T E  ++    N  
Sbjct: 107 SDEQHCKDIVQETVRQL-------GSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIF 159

Query: 176 GAFFLTKLLLPLLKNSPVPSRIVNVTS 202
             F +TK  L  LK       I+N  S
Sbjct: 160 SYFHVTKAALSHLKQG---DVIINTAS 183

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299

 Score = 78.0 bits (193), Expect = 2e-16
 Identities = 35/159 (22%), Positives = 66/159 (41%), Gaps = 27/159 (16%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLV------------GRSSHLLSETMADITSRNK 108
           V  +TGA  G G + A  L+REG  ++ +              +   L+ET+  +     
Sbjct: 30  VAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQV--EAL 87

Query: 109 DARLEAFQVDLSSFQSVLKFKDSLQQWLLDS--DMHSSIQLLINNAGILATSSRL---TP 163
             R+ A QVD+  F ++        Q  +D        + +++ NA + +  +RL    P
Sbjct: 88  GRRIIASQVDVRDFDAM--------QAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDP 139

Query: 164 EGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 202
           + +  M+  N  GA+   ++ +P +        IV  +S
Sbjct: 140 KTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSS 178

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score = 76.8 bits (190), Expect = 3e-16
 Identities = 29/144 (20%), Positives = 56/144 (38%), Gaps = 14/144 (9%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V +V+G   G+GA+   A+  EG  VV             A++             +D++
Sbjct: 9   VALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL-----ADAARYVHLDVT 63

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGAF 178
                    D+             + +L+NNAGIL   +        + +++  N  G F
Sbjct: 64  QPAQWKAAVDTAV------TAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVF 117

Query: 179 FLTKLLLPLLKNSPVPSRIVNVTS 202
              + ++  +K +   S I+N++S
Sbjct: 118 LGIRAVVKPMKEAGRGS-IINISS 140

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score = 76.4 bits (189), Expect = 3e-16
 Identities = 29/147 (19%), Positives = 56/147 (38%), Gaps = 19/147 (12%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V +VTG  SG+G      L  EG  V     +     +  A++    + +     + D+S
Sbjct: 8   VALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---GERSM--FVRHDVS 62

Query: 121 SFQSVLKFKDSLQQWLLDS--DMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIG 176
           S              ++ +      ++ +L+NNAGIL          E + +++  N   
Sbjct: 63  SEADW--------TLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTES 114

Query: 177 AFFLTKLLLPLLKNSPVPSRIVNVTSF 203
            F   +  +  +K +     I+N+ S 
Sbjct: 115 VFIGCQQGIAAMKET--GGSIINMASV 139

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281

 Score = 76.0 bits (188), Expect = 6e-16
 Identities = 35/158 (22%), Positives = 64/158 (40%), Gaps = 27/158 (17%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHL------------LSETMADITSRNK 108
             ++TG   G+G + A AL+  G  + +  R  +             L+ET+A +     
Sbjct: 12  TALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALV--EKT 69

Query: 109 DARLEAFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEG 165
             R  + +VD+    ++     ++             I + I NAGI   A    +    
Sbjct: 70  GRRCISAKVDVKDRAALESFVAEAEDTL-------GGIDIAITNAGISTIALLPEVESAQ 122

Query: 166 YDQMMSTNYIGAFFLTKLLLP-LLKNSPVPSRIVNVTS 202
           +D+++ TN  G F     + P ++K +    RIV V+S
Sbjct: 123 WDEVIGTNLTGTFNTIAAVAPGMIKRN--YGRIVTVSS 158

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286

 Score = 75.7 bits (187), Expect = 1e-15
 Identities = 32/163 (19%), Positives = 65/163 (39%), Gaps = 31/163 (19%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLV----------------GRSSHLLSETMADIT 104
           V  VTGA  G G + A  L++EG  ++ V                  +   L+ET   + 
Sbjct: 13  VAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLV- 71

Query: 105 SRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS--DMHSSIQLLINNAGILATSS--- 159
            +  + R+   +VD+  + ++        +  +DS  +    + +++ NAGI        
Sbjct: 72  -KGHNRRIVTAEVDVRDYDAL--------KAAVDSGVEQLGRLDIIVANAGIGNGGDTLD 122

Query: 160 RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 202
           + + E + +M+  N  G +   K  +P +        I+  +S
Sbjct: 123 KTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSS 165

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score = 74.6 bits (184), Expect = 1e-15
 Identities = 34/153 (22%), Positives = 59/153 (38%), Gaps = 32/153 (20%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
             +VTG  SGLG AAA AL   G+ VV+             D+    +D      + D++
Sbjct: 4   SALVTGGASGLGRAAALALKARGYRVVV------------LDLRREGEDLI--YVEGDVT 49

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI------LATSSRLTPEGYDQMMSTNY 174
             + V +     Q+        + +  +++ AG+      L        E + +++  N 
Sbjct: 50  REEDVRRAVARAQE-------EAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNL 102

Query: 175 IGAFFLTKLLLPL-LKNSPVPS----RIVNVTS 202
           +G F + +L      +N P        IVN  S
Sbjct: 103 LGTFNVLRLAAWAMRENPPDAEGQRGVIVNTAS 135

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score = 74.6 bits (184), Expect = 2e-15
 Identities = 38/157 (24%), Positives = 63/157 (40%), Gaps = 22/157 (14%)

Query: 57  IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQ 116
           +K  V IVTGA+SGLGAA    L++EG  V+ +        E  A++      A +    
Sbjct: 5   LKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL-----GAAVRFRN 59

Query: 117 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI------LATSSRLTPEGYDQMM 170
            D+++           +Q          +  L+N AG       L  S     + + + +
Sbjct: 60  ADVTNEADATAALAFAKQ------EFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTV 113

Query: 171 STNYIGAFFLTKLLLPLL-KNSPVPS----RIVNVTS 202
           + N IG F + +L   ++ +  P        IVN  S
Sbjct: 114 AVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTAS 150

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score = 75.6 bits (186), Expect = 2e-15
 Identities = 44/230 (19%), Positives = 79/230 (34%), Gaps = 48/230 (20%)

Query: 58  KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRS----SHLLSETMADITSRNKDARLE 113
            + + ++TGA+SG G   A AL+  G  V    R     +    E +A     N    L 
Sbjct: 4   SKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDV-DLR 62

Query: 114 AFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMS 171
             ++D+ S  SV +  D +            I +LI+NAG +        TPE + ++  
Sbjct: 63  TLELDVQSQVSVDRAIDQII------GEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYD 116

Query: 172 TNYIGAFFLTKLLLPLL--KNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCY 229
            N +    + +  LP +  +       ++ ++S                +          
Sbjct: 117 INVLSTQRVNRAALPHMRRQKH---GLLIWISS---------------SSSAGGT----P 154

Query: 230 PCARIYEYSKLCLLIFS----YELHRNLGLDKSRHVSVIAADPGVVKTNI 275
           P    Y  +K  +   +     EL    G+      S+I   PG   +  
Sbjct: 155 PYLAPYFAAKAAMDAIAVQYAREL-SRWGI----ETSIIV--PGAFTSGT 197

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score = 73.9 bits (182), Expect = 3e-15
 Identities = 25/158 (15%), Positives = 52/158 (32%), Gaps = 23/158 (14%)

Query: 57  IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQ 116
            +    IV+G   GLG A    L  +G  VV+   ++        ++       R E   
Sbjct: 28  FEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL-----GNRAEFVS 82

Query: 117 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEG-------YDQM 169
            +++S  SVL   ++  Q             ++ + G       +  +G       + + 
Sbjct: 83  TNVTSEDSVLAAIEAANQL------GRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKT 136

Query: 170 MSTNYIGAFFLTKLLLPL-LKNSPVPS----RIVNVTS 202
           +     G + + +L+        P  +     +V   S
Sbjct: 137 IDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTAS 174

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score = 73.8 bits (182), Expect = 4e-15
 Identities = 33/159 (20%), Positives = 57/159 (35%), Gaps = 24/159 (15%)

Query: 57  IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQ 116
           +K  V ++TG  SGLG A A  L  +G   VL+   +         +             
Sbjct: 10  VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL-----GNNCVFAP 64

Query: 117 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--------LATSSRLTPEGYDQ 168
            D++S + V       +           + + +N AGI        L      T E + +
Sbjct: 65  ADVTSEKDVQTALALAKGK------FGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQR 118

Query: 169 MMSTNYIGAFFLTKLLLPL-LKNSPVPS----RIVNVTS 202
           ++  N +G F + +L+     +N P        I+N  S
Sbjct: 119 VLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTAS 157

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score = 72.6 bits (179), Expect = 8e-15
 Identities = 33/152 (21%), Positives = 61/152 (40%), Gaps = 24/152 (15%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V I+TG   G+G   A    R G  VV+   +     +   +I S      +     D++
Sbjct: 18  VAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS---PDVISFVHCDVT 74

Query: 121 SFQSVLKFKDSLQQWLLDS--DMHSSIQLLINNAGILATSSR----LTPEGYDQMMSTNY 174
             + V        + L+D+    H  + ++  N G+L+T+         E + ++M  N 
Sbjct: 75  KDEDV--------RNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINV 126

Query: 175 IGAFFLTKLLLPLLKNSPVPSR---IVNVTSF 203
            GAF + K    ++    +P++   IV   S 
Sbjct: 127 YGAFLVAKHAARVM----IPAKKGSIVFTASI 154

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score = 71.5 bits (176), Expect = 2e-14
 Identities = 33/159 (20%), Positives = 60/159 (37%), Gaps = 28/159 (17%)

Query: 57  IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQ 116
           I+  V +VTG  SGLG A    L   G  VV++      +   + D        R     
Sbjct: 7   IRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVADLGD--------RARFAA 58

Query: 117 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI------LATSSRLTPEGYDQMM 170
            D++   +V    D  +          ++++++N AG       L+     +   + +++
Sbjct: 59  ADVTDEAAVASALDLAET-------MGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIV 111

Query: 171 STNYIGAFFLTKLLLPL-LKNSPVPS------RIVNVTS 202
             N +G+F + +L      K  PV         I+N  S
Sbjct: 112 DINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTAS 150

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score = 71.1 bits (175), Expect = 3e-14
 Identities = 38/144 (26%), Positives = 63/144 (43%), Gaps = 20/144 (13%)

Query: 64  VTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQ 123
           VTGA+SG G A A A    G  V+   R     +E + D+ +   D R EA  +D++  +
Sbjct: 10  VTGASSGFGRAIAEAAVAAGDTVIGTARR----TEALDDLVAAYPD-RAEAISLDVTDGE 64

Query: 124 SVLK-FKDSLQQWLLDSDMHSSIQLLINNAG--ILATSSRLTPEGYDQMMSTNYIGAFFL 180
            +     D L +       +  + +L+NNAG   +      T      +   +  G   L
Sbjct: 65  RIDVVAADVLAR-------YGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARL 117

Query: 181 TKLLLPLL--KNSPVPSRIVNVTS 202
           T+ LLP +  + S     +VN++S
Sbjct: 118 TRALLPQMRERGSG---SVVNISS 138

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score = 69.3 bits (170), Expect = 2e-13
 Identities = 48/229 (20%), Positives = 80/229 (34%), Gaps = 50/229 (21%)

Query: 59  RPVCIVTGATSGLGAAAAYALSRE---GFHVVLVGRSSHLLSETMADITSRNKDA-RLEA 114
           R V ++TG +SG+G   A  L+ +    F V    R             +       LE 
Sbjct: 2   RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLET 61

Query: 115 FQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMST 172
            Q+D+   +SV   ++ + +  +D        +L+ NAG+  L     L  +    ++  
Sbjct: 62  LQLDVRDSKSVAAARERVTEGRVD--------VLVCNAGLGLLGPLEALGEDAVASVLDV 113

Query: 173 NYIGAFFLTKLLLPLLK--NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYP 230
           N +G   + +  LP +K   S    R++   S               + G   L     P
Sbjct: 114 NVVGTVRMLQAFLPDMKRRGS---GRVLVTGS---------------VGGLMGL-----P 150

Query: 231 CARIYEYSKLCLLIFS----YELHRNLGLDKSRHVSVIAADPGVVKTNI 275
              +Y  SK  L          L    G+    H+S+I    G V T  
Sbjct: 151 FNDVYCASKFALEGLCESLAVLL-LPFGV----HLSLIE--CGPVHTAF 192

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322

 Score = 65.5 bits (160), Expect = 4e-12
 Identities = 35/160 (21%), Positives = 66/160 (41%), Gaps = 27/160 (16%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVL--VGRSSH---LLSETMAD-----ITSRNKDA 110
           V IVTGA  G+G A A A + EG  VV+  +G           + A      IT+   +A
Sbjct: 29  VVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEA 88

Query: 111 RLEAFQVDLSSFQSVLK-FKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYD 167
              A   +++ +       + +++ +         + +L+NNAGI+     +  + E +D
Sbjct: 89  --VADGSNVADWDQAAGLIQTAVETF-------GGLDVLVNNAGIVRDRMIANTSEEEFD 139

Query: 168 QMMSTNYIGAFFLTKLLLPLLKNSPVPS-----RIVNVTS 202
            +++ +  G F   +      +           RI+N +S
Sbjct: 140 AVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSS 179

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 66.3 bits (162), Expect = 5e-12
 Identities = 37/153 (24%), Positives = 67/153 (43%), Gaps = 23/153 (15%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVL---------VGRSSHLLSETMADITSRNKDAR 111
           V I+TGA  GLG   +   ++ G  VV+          G +S      + +I      A 
Sbjct: 10  VVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVA- 68

Query: 112 LEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQM 169
             A   ++     +   + +++ +        ++ ++INNAGIL  A+  ++T + Y  +
Sbjct: 69  -VADYNNVLDGDKI--VETAVKNF-------GTVHVIINNAGILRDASMKKMTEKDYKLV 118

Query: 170 MSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 202
           +  +  GAF +TK   P  +      RIVN +S
Sbjct: 119 IDVHLNGAFAVTKAAWPYFQKQKY-GRIVNTSS 150

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 51.6 bits (124), Expect = 2e-07
 Identities = 37/146 (25%), Positives = 73/146 (50%), Gaps = 19/146 (13%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVL--VGRSSHLLSETMADITSRNKDARLEAFQVD 118
           V ++TGA +GLG   A   ++ G  VV+     ++    +T+ +I +   +A        
Sbjct: 324 VVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDAT----KTVDEIKAAGGEA-------- 371

Query: 119 LSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIG 176
                 V K  +++ + ++D   + +I +L+NNAGIL   + ++++ + +D +   + IG
Sbjct: 372 WPDQHDVAKDSEAIIKNVIDK--YGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIG 429

Query: 177 AFFLTKLLLPLLKNSPVPSRIVNVTS 202
            F L++L  P         RI+N+TS
Sbjct: 430 TFNLSRLAWPYFVEKQF-GRIINITS 454

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613

 Score = 63.3 bits (154), Expect = 4e-11
 Identities = 33/153 (21%), Positives = 63/153 (41%), Gaps = 23/153 (15%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVL---------VGRSSHLLSETMADITSRNKDAR 111
           V +VTGA +GLG   A   +  G  VV+          G S       + +I     +A 
Sbjct: 21  VAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEA- 79

Query: 112 LEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQM 169
             A    +     V+  + +++ +         + +L+NNAGIL   +  + + + ++ +
Sbjct: 80  -VADYNSVIDGAKVI--ETAIKAF-------GRVDILVNNAGILRDRSLVKTSEQDWNLV 129

Query: 170 MSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 202
              +  G+F  T+   P +K      RI+  +S
Sbjct: 130 NDVHLKGSFKCTQAAFPYMKKQNY-GRIIMTSS 161

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319

 Score = 62.0 bits (151), Expect = 5e-11
 Identities = 41/153 (26%), Positives = 68/153 (44%), Gaps = 23/153 (15%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVL---------VGRSSHLLSETMADITSRNKDAR 111
           V +VTGA  GLG A A A +  G  VV+         VG+ S    + + +I  R   A 
Sbjct: 11  VVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKA- 69

Query: 112 LEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQM 169
             A    + + + +   K +L  +         I +++NNAGIL   + SR++ E +D +
Sbjct: 70  -VANYDSVEAGEKL--VKTALDTF-------GRIDVVVNNAGILRDRSFSRISDEDWDII 119

Query: 170 MSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS 202
              +  G+F +T+     +K      RI+   S
Sbjct: 120 QRVHLRGSFQVTRAAWDHMKKQNY-GRIIMTAS 151

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287

 Score = 52.6 bits (126), Expect = 6e-08
 Identities = 19/99 (19%), Positives = 28/99 (28%), Gaps = 16/99 (16%)

Query: 55  TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEA 114
             +K    +V   T  +G  +A  L+ EG  VVL GR           +  R K     A
Sbjct: 115 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAA 174

Query: 115 FQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAG 153
              D +S    +K                    +     
Sbjct: 175 ETADDASRAEAVK----------------GAHFVFTAGA 197

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 43.7 bits (102), Expect = 7e-05
 Identities = 45/272 (16%), Positives = 84/272 (30%), Gaps = 79/272 (29%)

Query: 24  PVSLLTSHFQLLFQNLFPRKSNPYKRCVPPITGIKRPV------------C--IVT---- 65
            + L     Q   + L   KS PY+ C+  +  +   V            C  ++T    
Sbjct: 222 NIKLRIHSIQAELRRLL--KSKPYENCL--L--VLLNVQNAKAWNAFNLSCKILLTTRFK 275

Query: 66  GATSGLGAAAAYALSREGFHVVLVGRSSHL-LSETM---ADITS-RNKDARLEAFQVD-- 118
             T  L AA          H+ L   S  L   E           R +D   E    +  
Sbjct: 276 QVTDFLSAATTT-------HISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPR 328

Query: 119 -LSSFQSVLK-FKDSLQQWL-LDSD-MHSSIQLLINNAGILATSSRLTPEGYDQMMSTNY 174
            LS     ++    +   W  ++ D + + I+  +N          L P  Y +M    +
Sbjct: 329 RLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNV---------LEPAEYRKM----F 375

Query: 175 IGAFFLTKLLLPLLKNSPVPSRIVNV--TSFTHRNVFNAQVNNETITGKFFLRS--KCYP 230
                +     P   ++ +P+ ++++        +V         +  K    S  +  P
Sbjct: 376 D-RLSV----FP--PSAHIPTILLSLIWFDVIKSDV-------MVVVNKLHKYSLVEKQP 421

Query: 231 CARIYEYSKLCLLIF-----SYELHRNLGLDK 257
                    + L +       Y LHR++ +D 
Sbjct: 422 KESTISIPSIYLELKVKLENEYALHRSI-VDH 452

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512

 Score = 42.2 bits (99), Expect = 3e-04
 Identities = 24/131 (18%), Positives = 46/131 (35%), Gaps = 15/131 (11%)

Query: 63   IVTGATSGLGAAAAYALSREGF-HVVLVGRS---SHLLSETMADITSRNKDARLEAFQVD 118
            ++TG   G G   A  L   G   +VL  RS   +   +  + +   +    ++     +
Sbjct: 1888 VITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQ--GVQVLVSTSN 1945

Query: 119  LSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIG 176
             SS        D  +  + ++     +  + N A +L  A     TPE +  +    Y G
Sbjct: 1946 ASS-------LDGARSLITEATQLGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSG 1998

Query: 177  AFFLTKLLLPL 187
               L ++    
Sbjct: 1999 TANLDRVTREA 2009

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	365
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	100.0
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	100.0
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	100.0
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	100.0
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	100.0
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	100.0
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	100.0
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	100.0
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	100.0
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	100.0
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	100.0
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	100.0
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	100.0
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	100.0
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	100.0
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	100.0
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	100.0
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	100.0
3rih_A	293	Short chain dehydrogenase or reductase; structural	100.0
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	100.0
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	100.0
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	100.0
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	100.0
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	100.0
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	100.0
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	100.0
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	100.0
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	100.0
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	100.0
4dqx_A	277	Probable oxidoreductase protein; structural genomi	100.0
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	100.0
3imf_A	257	Short chain dehydrogenase; structural genomics, in	100.0
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	100.0
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	100.0
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	100.0
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	100.0
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	100.0
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	100.0
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	100.0
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	100.0
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	100.0
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	100.0
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	100.0
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	100.0
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	100.0
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	100.0
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	100.0
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	100.0
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	100.0
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	100.0
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	100.0
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	100.0
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	100.0
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	100.0
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	100.0
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	100.0
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	100.0
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	100.0
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	100.0
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	100.0
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	100.0
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	100.0
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	100.0
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	100.0
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	100.0
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	100.0
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	100.0
3cxt_A	291	Dehydrogenase with different specificities; rossma	100.0
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	100.0
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	100.0
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	100.0
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	100.0
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	100.0
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	100.0
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	100.0
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	100.0
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	100.0
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	100.0
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	100.0
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	100.0
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	100.0
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	100.0
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	100.0
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	100.0
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	100.0
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	100.0
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	100.0
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	100.0
1xhl_A	297	Short-chain dehydrogenase/reductase family member	100.0
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	100.0
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	100.0
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	100.0
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	100.0
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	100.0
1xkq_A	280	Short-chain reductase family member (5D234); parra	100.0
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	100.0
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	100.0
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	100.0
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	100.0
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	100.0
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	100.0
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	100.0
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	100.0
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	100.0
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	100.0
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
1spx_A	278	Short-chain reductase family member (5L265); paral	100.0
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	100.0
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	100.0
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	100.0
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	100.0
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	100.0
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	100.0
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	100.0
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	100.0
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	100.0
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	100.0
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	100.0
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	100.0
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	100.0
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	100.0
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	100.0
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	100.0
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	100.0
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	100.0
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	100.0
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	100.0
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	100.0
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	100.0
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	100.0
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	100.0
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	100.0
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	100.0
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	100.0
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	100.0
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	100.0
1xq1_A	266	Putative tropinone reducatse; structural genomics,	100.0
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	100.0
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	100.0
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	100.0
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	100.0
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	100.0
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	100.0
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	100.0
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	100.0
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	100.0
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	100.0
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	100.0
4e4y_A	244	Short chain dehydrogenase family protein; structur	100.0
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	100.0
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	100.0
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	100.0
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	100.0
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	100.0
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	100.0
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	100.0
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	100.0
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	100.0
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	100.0
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	100.0
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	100.0
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	100.0
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	100.0
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	100.0
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	100.0
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	100.0
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	100.0
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	100.0
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	100.0
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	100.0
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	100.0
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	100.0
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	100.0
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	100.0
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	100.0
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	100.0
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	100.0
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	100.0
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	100.0
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	100.0
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	100.0
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	100.0
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	100.0
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	100.0
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	100.0
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	100.0
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	100.0
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	100.0
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	100.0
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	100.0
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	100.0
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	100.0
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	100.0
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	100.0
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.97
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.97
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.97
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.97
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.97
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.96
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.95
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.95
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.95
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.94
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.94
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.93
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.93
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.92
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.92
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.92
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.92
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.92
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.92
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.91
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.91
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.91
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.9
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.9
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.9
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.9
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.9
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.89
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.89
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.89
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.89
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.88
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.88
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.88
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.88
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.88
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.88
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.88
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.88
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.88
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.88
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.88
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.88
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.88
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.88
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.87
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.87
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.87
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.87
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.87
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.87
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.87
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.87
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.87
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.86
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.86
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.86
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.86
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.85
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.85
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.85
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.85
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.85
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.85
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.84
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.84
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.84
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.84
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.84
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.82
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.82
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.81
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.81
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.81
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.81
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.81
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.8
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.8
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.8
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.79
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.79
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.79
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.77
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.77
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.77
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.75
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.71
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.71
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.69
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.69
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.68
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.68
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.68
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.67
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.66
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.6
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.6
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.59
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.57
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.56
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.5
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.38
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.15
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	99.12
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.94
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.93
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.83
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.8
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	98.78
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.75
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	98.73
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.71
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	98.69
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.67
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.67
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.65
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	98.62
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	98.61
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	98.61
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	98.6
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	98.57
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.51
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	98.51
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.46
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	98.43
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	98.37
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.34
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	98.34
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	98.33
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.33
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	98.32
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.31
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	98.31
3gms_A	340	Putative NADPH:quinone reductase; structural genom	98.3
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.28
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	98.26
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	98.25
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	98.25
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	98.24
4eye_A	342	Probable oxidoreductase; structural genomics, niai	98.23
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	98.22
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	98.17
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	98.16
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	98.09
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	98.06
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	98.04
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	98.02
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.99
1id1_A	153	Putative potassium channel protein; RCK domain, E.	97.96
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.94
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.89
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	97.88
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.87
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	97.84
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.83
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	97.82
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	97.8
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.8
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	97.79
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	97.77
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	97.76
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.75
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	97.71
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.67
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	97.67
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	97.65
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.62
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.58
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	97.58
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	97.57
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	97.56
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	97.56
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	97.54
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.54
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	97.52
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	97.52
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.51
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	97.51
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.49
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	97.49
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	97.48
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.44
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	97.44
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.42
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	97.41
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.39
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	97.38
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	97.38
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	97.36
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	97.36
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	97.34
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.33
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	97.33
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	97.33
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	97.31
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	97.31
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	97.3
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	97.27
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	97.26
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	97.24
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.23
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	97.22
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	97.22
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	97.21
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	97.14
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	97.11
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	97.11
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	97.1
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	97.1
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	97.08
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	97.08
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	97.05
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	97.05
3tl2_A	315	Malate dehydrogenase; center for structural genomi	97.03
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	97.0
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	96.99
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	96.98
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	96.97
3vh1_A	598	Ubiquitin-like modifier-activating enzyme ATG7; au	96.96
4gsl_A	615	Ubiquitin-like modifier-activating enzyme ATG7; ub	96.95
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	96.94
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	96.93
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	96.91
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	96.9
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	96.9
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	96.87
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	96.84
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	96.8
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	96.79
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	96.78
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	96.77
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	96.75
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	96.75
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	96.71
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	96.7
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	96.69
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	96.69
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	96.65
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	96.63
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	96.63
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	96.6
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	96.56
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	96.55
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	96.54
1tt5_B	434	Ubiquitin-activating enzyme E1C isoform 1; cell cy	96.53
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	96.47
1y8q_B	640	Anthracycline-, ubiquitin-like 2 activating enzyme	96.41
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	96.4
2d4a_B	308	Malate dehydrogenase; archaea, hyperthermophIle, o	96.39
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	96.37
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	96.32
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	96.27
1y8q_A	346	Ubiquitin-like 1 activating enzyme E1A; SUMO, hete	96.27
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	96.25
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	96.25
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	96.24
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	96.21
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.19
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	96.16
3njr_A	204	Precorrin-6Y methylase; methyltransferase, decarbo	96.15
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	96.09
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	96.09
1lnq_A	336	MTHK channels, potassium channel related protein;	96.06
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	96.05
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	95.95
3mti_A	185	RRNA methylase; SAM-dependent, PSI, MCSG, structur	95.89
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	95.87
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	95.86
4g65_A	461	TRK system potassium uptake protein TRKA; structur	95.86
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	95.85
4hc4_A	376	Protein arginine N-methyltransferase 6; HRMT1L6, S	95.84
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	95.83
3aoe_E	419	Glutamate dehydrogenase; rossmann fold, NADH, oxid	95.81
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	95.74
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	95.73
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	95.72
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	95.65
1obb_A	480	Maltase, alpha-glucosidase; glycosidase, sulfinic	95.62
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	95.6
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	95.58
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	95.53
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	95.5
3l07_A	285	Bifunctional protein fold; structural genomics, ID	95.49
3lpm_A	259	Putative methyltransferase; structural genomics, p	95.49
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	95.43
3fpf_A	298	Mtnas, putative uncharacterized protein; thermonic	95.42

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=100.00  E-value=1.5e-52  Score=373.66  Aligned_cols=241  Identities=25%  Similarity=0.303  Sum_probs=213.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      +|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++++.  +.++.++++|++|+++++++++++.+ 
T Consensus         4 sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~--g~~~~~~~~Dvt~~~~v~~~~~~~~~-   80 (254)
T 4fn4_A            4 SLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGM--GKEVLGVKADVSKKKDVEEFVRRTFE-   80 (254)
T ss_dssp             GGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHH-
Confidence            589999999999999999999999999999999999999999999999876  56899999999999999999999998 


Q ss_pred             HhccCCCCCeeEEEecCCccc---CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017812          136 LLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~  212 (365)
                           ++++||+||||||+..   +..++++++|++++++|+.|+|+++|+++|+|++++ .|+||++||.++.      
T Consensus        81 -----~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IVnisS~~g~------  148 (254)
T 4fn4_A           81 -----TYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQG-KGVIVNTASIAGI------  148 (254)
T ss_dssp             -----HHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT------
T ss_pred             -----HcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEechhhc------
Confidence                 5689999999999763   456889999999999999999999999999999877 7999999999998      


Q ss_pred             CCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh--H-HHHHHHH
Q 017812          213 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS--F-LSLMAFT  289 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~--~-~~~~~~~  289 (365)
                                    .+.++..+|++||+|+.+|+++|+.|++   ++|||||+|+||+|+|+|......  . .......
T Consensus       149 --------------~~~~~~~~Y~asKaal~~ltr~lA~ela---~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~  211 (254)
T 4fn4_A          149 --------------RGGFAGAPYTVAKHGLIGLTRSIAAHYG---DQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTK  211 (254)
T ss_dssp             --------------CSSSSCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHH
T ss_pred             --------------CCCCCChHHHHHHHHHHHHHHHHHHHhh---hhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHh
Confidence                          8888999999999999999999999998   899999999999999999765322  1 1122222


Q ss_pred             HHHHhcCCCCHHHHHHHHHHHhcCCC---CCcccEEeCCCCccc
Q 017812          290 VLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRTV  330 (365)
Q Consensus       290 ~~~~~~~~~~p~e~A~~i~~~~l~~~---~~~G~~~~~~~g~~~  330 (365)
                      ...|++|+.+|||+|+.++  ||+|+   ..+|+.+.+|+|..+
T Consensus       212 ~~~~~~R~g~pediA~~v~--fLaSd~a~~iTG~~i~VDGG~t~  253 (254)
T 4fn4_A          212 LMSLSSRLAEPEDIANVIV--FLASDEASFVNGDAVVVDGGLTV  253 (254)
T ss_dssp             HHTTCCCCBCHHHHHHHHH--HHHSGGGTTCCSCEEEESTTGGG
T ss_pred             cCCCCCCCcCHHHHHHHHH--HHhCchhcCCcCCEEEeCCCccc
Confidence            3346789999999999999  56665   458999999998653

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=100.00  E-value=2.5e-52  Score=372.35  Aligned_cols=243  Identities=20%  Similarity=0.258  Sum_probs=216.9

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHH
Q 017812           54 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  133 (365)
Q Consensus        54 ~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~  133 (365)
                      +.+++||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.  +.++.++++|++|+++++++++++.
T Consensus         4 ~f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~   81 (255)
T 4g81_D            4 LFDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRK--GYDAHGVAFDVTDELAIEAAFSKLD   81 (255)
T ss_dssp             TTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHT--TCCEEECCCCTTCHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHH
Confidence            34689999999999999999999999999999999999999999999999887  4688999999999999999999999


Q ss_pred             HHHhccCCCCCeeEEEecCCcc--cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017812          134 QWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  211 (365)
Q Consensus       134 ~~~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~  211 (365)
                      +      ++++||+||||||+.  .+..++++++|++++++|+.|+|+++|+++|+|.+++..|+||++||.++.     
T Consensus        82 ~------~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~-----  150 (255)
T 4g81_D           82 A------EGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQ-----  150 (255)
T ss_dssp             H------TTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGT-----
T ss_pred             H------HCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhc-----
Confidence            8      789999999999986  455688999999999999999999999999999765447999999999998     


Q ss_pred             cCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHH-HHHHHH
Q 017812          212 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLS-LMAFTV  290 (365)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~-~~~~~~  290 (365)
                                     .+.++..+|++||+|+.+|+++|+.|++   +.|||||+|+||+|+|++.+....... ......
T Consensus       151 ---------------~~~~~~~~Y~asKaal~~ltr~lA~ela---~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~  212 (255)
T 4g81_D          151 ---------------AARPTVAPYTAAKGGIKMLTCSMAAEWA---QFNIQTNAIGPGYILTDMNTALIEDKQFDSWVKS  212 (255)
T ss_dssp             ---------------SBCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCCGGGHHHHTCHHHHHHHHH
T ss_pred             ---------------CCCCCchhHHHHHHHHHHHHHHHHHHhc---ccCeEEEEEeeCCCCCchhhcccCCHHHHHHHHh
Confidence                           8889999999999999999999999998   899999999999999999876543222 223345


Q ss_pred             HHHhcCCCCHHHHHHHHHHHhcCCC---CCcccEEeCCCCcc
Q 017812          291 LKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRT  329 (365)
Q Consensus       291 ~~~~~~~~~p~e~A~~i~~~~l~~~---~~~G~~~~~~~g~~  329 (365)
                      ..|++|+.+|||+|+.++  ||+|+   ..+|+.+.+|+|..
T Consensus       213 ~~Pl~R~g~pediA~~v~--fL~S~~a~~iTG~~i~VDGG~~  252 (255)
T 4g81_D          213 STPSQRWGRPEELIGTAI--FLSSKASDYINGQIIYVDGGWL  252 (255)
T ss_dssp             HSTTCSCBCGGGGHHHHH--HHHSGGGTTCCSCEEEESTTGG
T ss_pred             CCCCCCCcCHHHHHHHHH--HHhCchhCCCcCCEEEECCCeE
Confidence            578999999999999999  55555   46899999999854

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=100.00  E-value=4.4e-50  Score=361.06  Aligned_cols=235  Identities=26%  Similarity=0.346  Sum_probs=203.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      .|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++     +.++..+++|++|+++++++++++.+ 
T Consensus        26 rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~-----g~~~~~~~~Dv~~~~~v~~~~~~~~~-   99 (273)
T 4fgs_A           26 RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI-----GGGAVGIQADSANLAELDRLYEKVKA-   99 (273)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTCEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             hhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----CCCeEEEEecCCCHHHHHHHHHHHHH-
Confidence            389999999999999999999999999999999999999999888887     56788999999999999999999998 


Q ss_pred             HhccCCCCCeeEEEecCCcc--cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                           .+|+||+||||||+.  .+..++++++|++++++|+.|+|+++|+++|+|++   .|+||++||.++.       
T Consensus       100 -----~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~---~G~IInisS~~~~-------  164 (273)
T 4fgs_A          100 -----EAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLAR---GSSVVLTGSTAGS-------  164 (273)
T ss_dssp             -----HHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE---EEEEEEECCGGGG-------
T ss_pred             -----HcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhh---CCeEEEEeehhhc-------
Confidence                 568999999999986  45678899999999999999999999999999975   4899999999998       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH----H--HHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF----L--SLMA  287 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~----~--~~~~  287 (365)
                                   .+.++..+|++||+|+.+|+++|+.|++   +.|||||+|+||+|+|++..+....    .  ....
T Consensus       165 -------------~~~~~~~~Y~asKaav~~ltr~lA~Ela---~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~  228 (273)
T 4fgs_A          165 -------------TGTPAFSVYAASKAALRSFARNWILDLK---DRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNA  228 (273)
T ss_dssp             -------------SCCTTCHHHHHHHHHHHHHHHHHHHHTT---TSCEEEEEEEECSBCC---------CHHHHHHHHHH
T ss_pred             -------------cCCCCchHHHHHHHHHHHHHHHHHHHhc---ccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHH
Confidence                         8889999999999999999999999998   8999999999999999997654221    1  1122


Q ss_pred             HHHHHHhcCCCCHHHHHHHHHHHhcCCC---CCcccEEeCCCCcc
Q 017812          288 FTVLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRT  329 (365)
Q Consensus       288 ~~~~~~~~~~~~p~e~A~~i~~~~l~~~---~~~G~~~~~~~g~~  329 (365)
                      .....|++|+.+|||+|++++  ||+|+   ..+|+.+.+|+|..
T Consensus       229 ~~~~~PlgR~g~peeiA~~v~--FLaSd~a~~iTG~~i~VDGG~s  271 (273)
T 4fgs_A          229 LAAQVPMGRVGRAEEVAAAAL--FLASDDSSFVTGAELFVDGGSA  271 (273)
T ss_dssp             HHHHSTTSSCBCHHHHHHHHH--HHHSGGGTTCCSCEEEESTTTT
T ss_pred             HHhcCCCCCCcCHHHHHHHHH--HHhCchhcCccCCeEeECcChh
Confidence            344568999999999999999  66665   45899999999853

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=100.00  E-value=2.9e-50  Score=355.67  Aligned_cols=235  Identities=22%  Similarity=0.248  Sum_probs=203.8

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      .+|+||++|||||++|||+++|++|+++|++|++++|+.+  +++.+++.+.  +.++..+++|++|++++++++     
T Consensus         5 f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~--g~~~~~~~~Dv~d~~~v~~~~-----   75 (247)
T 4hp8_A            5 FSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKD--GGNASALLIDFADPLAAKDSF-----   75 (247)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHT--TCCEEEEECCTTSTTTTTTSS-----
T ss_pred             cCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHh--CCcEEEEEccCCCHHHHHHHH-----
Confidence            3689999999999999999999999999999999999865  4566666665  568899999999999887654     


Q ss_pred             HHhccCCCCCeeEEEecCCcc--cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017812          135 WLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~  212 (365)
                            .+++||+||||||+.  .+..++++++|++++++|+.|+|+++|+++|+|+++++.|+||++||.++.      
T Consensus        76 ------~~g~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~------  143 (247)
T 4hp8_A           76 ------TDAGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSF------  143 (247)
T ss_dssp             ------TTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGT------
T ss_pred             ------HhCCCCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhC------
Confidence                  347899999999986  455688999999999999999999999999999876546999999999998      


Q ss_pred             CCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHH-HHHHHHHH
Q 017812          213 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFL-SLMAFTVL  291 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~-~~~~~~~~  291 (365)
                                    .+.++..+|++||+|+.+|+|+|+.|++   ++|||||+|+||+|+|+|.+...... ........
T Consensus       144 --------------~g~~~~~~Y~asKaav~~ltr~lA~Ela---~~gIrVNaV~PG~i~T~~~~~~~~~~~~~~~~~~~  206 (247)
T 4hp8_A          144 --------------QGGIRVPSYTAAKHGVAGLTKLLANEWA---AKGINVNAIAPGYIETNNTEALRADAARNKAILER  206 (247)
T ss_dssp             --------------SCCSSCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHTT
T ss_pred             --------------CCCCCChHHHHHHHHHHHHHHHHHHHHh---hcCeEEEEEeeCCCCCcchhhcccCHHHHHHHHhC
Confidence                          8889999999999999999999999999   89999999999999999987653322 22233445


Q ss_pred             HHhcCCCCHHHHHHHHHHHhcCCC---CCcccEEeCCCCcc
Q 017812          292 KLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRT  329 (365)
Q Consensus       292 ~~~~~~~~p~e~A~~i~~~~l~~~---~~~G~~~~~~~g~~  329 (365)
                      .|++|+.+|||+|.+++  ||+|+   ..+|+.+.+|+|..
T Consensus       207 ~PlgR~g~peeiA~~v~--fLaSd~a~~iTG~~i~VDGG~~  245 (247)
T 4hp8_A          207 IPAGRWGHSEDIAGAAV--FLSSAAADYVHGAILNVDGGWL  245 (247)
T ss_dssp             CTTSSCBCTHHHHHHHH--HHTSGGGTTCCSCEEEESTTGG
T ss_pred             CCCCCCcCHHHHHHHHH--HHhCchhcCCcCCeEEECcccc
Confidence            68999999999999999  77776   45899999999864

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=100.00  E-value=3.1e-50  Score=354.81  Aligned_cols=229  Identities=20%  Similarity=0.256  Sum_probs=197.7

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      ++||++|||||++|||+++|++|+++|++|++++|+.+++++.        .+.++..+++|++|+++++++++      
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~--------~~~~~~~~~~Dv~~~~~v~~~~~------   74 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAP--------RHPRIRREELDITDSQRLQRLFE------   74 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSC--------CCTTEEEEECCTTCHHHHHHHHH------
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhh--------hcCCeEEEEecCCCHHHHHHHHH------
Confidence            5899999999999999999999999999999999998765431        14588999999999999988765      


Q ss_pred             hccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017812          137 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  216 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~  216 (365)
                          .+++||+||||||+..+..+++.++|++++++|+.|+|+++|+++|+|+++  .|+||++||.++.          
T Consensus        75 ----~~g~iDiLVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~--~G~IVnisS~~~~----------  138 (242)
T 4b79_A           75 ----ALPRLDVLVNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQR--GGSILNIASMYST----------  138 (242)
T ss_dssp             ----HCSCCSEEEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--CEEEEEECCGGGT----------
T ss_pred             ----hcCCCCEEEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc--CCeEEEEeecccc----------
Confidence                358899999999998888889999999999999999999999999999875  4999999999998          


Q ss_pred             cccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH-HHHHHHHHHHHhc
Q 017812          217 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF-LSLMAFTVLKLLG  295 (365)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~  295 (365)
                                .+.++..+|++||+|+.+|+|+|+.|++   ++|||||+|+||+|+|||.+..... ..........|++
T Consensus       139 ----------~~~~~~~~Y~asKaav~~ltr~lA~Ela---~~gIrVNaV~PG~i~T~m~~~~~~~~~~~~~~~~~~Plg  205 (242)
T 4b79_A          139 ----------FGSADRPAYSASKGAIVQLTRSLACEYA---AERIRVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPLA  205 (242)
T ss_dssp             ----------SCCSSCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCCC-----CCCHHHHHHHHHTCTTC
T ss_pred             ----------CCCCCCHHHHHHHHHHHHHHHHHHHHhh---hcCeEEEEEEeCCCCChhhhcccCCHHHHHHHHhcCCCC
Confidence                      8889999999999999999999999998   8999999999999999998765432 2223344557899


Q ss_pred             CCCCHHHHHHHHHHHhcCCC---CCcccEEeCCCCccc
Q 017812          296 LLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRTV  330 (365)
Q Consensus       296 ~~~~p~e~A~~i~~~~l~~~---~~~G~~~~~~~g~~~  330 (365)
                      |+.+|||+|++++  ||+|+   ..+|+.+.+|+|...
T Consensus       206 R~g~peeiA~~v~--fLaSd~a~~iTG~~l~VDGG~la  241 (242)
T 4b79_A          206 RWGEAPEVASAAA--FLCGPGASFVTGAVLAVDGGYLC  241 (242)
T ss_dssp             SCBCHHHHHHHHH--HHTSGGGTTCCSCEEEESTTGGG
T ss_pred             CCcCHHHHHHHHH--HHhCchhcCccCceEEECccHhh
Confidence            9999999999999  67776   458999999998643

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=100.00  E-value=4.3e-49  Score=352.88  Aligned_cols=238  Identities=24%  Similarity=0.271  Sum_probs=202.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      +|+||++|||||++|||+++|++|+++|++|++++|+.++.+ ..+++.+.  +.++.++++|++|+++++++++++.+ 
T Consensus         4 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~-~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~v~~~~~-   79 (258)
T 4gkb_A            4 NLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGA-FLDALAQR--QPRATYLPVELQDDAQCRDAVAQTIA-   79 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHH-HHHHHHHH--CTTCEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHH-HHHHHHhc--CCCEEEEEeecCCHHHHHHHHHHHHH-
Confidence            589999999999999999999999999999999999988754 44555555  45789999999999999999999998 


Q ss_pred             HhccCCCCCeeEEEecCCccc-CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017812          136 LLDSDMHSSIQLLINNAGILA-TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  214 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~-~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~  214 (365)
                           .+++||+||||||+.. ...+.+.++|++++++|+.|+++++|+++|+|++++  |+||++||.++.        
T Consensus        80 -----~~G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~--G~IVnisS~~~~--------  144 (258)
T 4gkb_A           80 -----TFGRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATR--GAIVNISSKTAV--------  144 (258)
T ss_dssp             -----HHSCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCTHHH--------
T ss_pred             -----HhCCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--CeEEEEeehhhc--------
Confidence                 5689999999999863 334778999999999999999999999999998754  999999999998        


Q ss_pred             CccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHH-----HHHHHH
Q 017812          215 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFL-----SLMAFT  289 (365)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~-----~~~~~~  289 (365)
                                  .+.++..+|++||+|+.+|+|+++.|++   +.|||||+|+||+|+|++.+......     ......
T Consensus       145 ------------~~~~~~~~Y~asKaav~~ltr~lA~ela---~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~  209 (258)
T 4gkb_A          145 ------------TGQGNTSGYCASKGAQLALTREWAVALR---EHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIA  209 (258)
T ss_dssp             ------------HCCSSCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEECSBCCSCC-----------CHHHHHH
T ss_pred             ------------cCCCCchHHHHHHHHHHHHHHHHHHHhc---ccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHH
Confidence                        7889999999999999999999999998   89999999999999999987643211     112223


Q ss_pred             HHHHhc-CCCCHHHHHHHHHHHhcCCC---CCcccEEeCCCCcc
Q 017812          290 VLKLLG-LLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRT  329 (365)
Q Consensus       290 ~~~~~~-~~~~p~e~A~~i~~~~l~~~---~~~G~~~~~~~g~~  329 (365)
                      ...|++ |+.+|||+|+.++  ||+|+   ..+|+.+.+|+|..
T Consensus       210 ~~~plg~R~g~peeiA~~v~--fLaS~~a~~iTG~~i~VDGG~T  251 (258)
T 4gkb_A          210 AKVPLGRRFTTPDEIADTAV--FLLSPRASHTTGEWLFVDGGYT  251 (258)
T ss_dssp             TTCTTTTSCBCHHHHHHHHH--HHHSGGGTTCCSCEEEESTTTT
T ss_pred             hcCCCCCCCcCHHHHHHHHH--HHhCchhcCccCCeEEECCCcc
Confidence            334664 8999999999999  55565   46899999999964

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=100.00  E-value=1.7e-48  Score=345.93  Aligned_cols=229  Identities=21%  Similarity=0.220  Sum_probs=201.0

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhc
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  138 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~  138 (365)
                      +|+||||||++|||+++|++|+++|++|++++|++++++++.++      ..++.++++|++|+++++++++++.+    
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~------~~~~~~~~~Dv~~~~~v~~~v~~~~~----   71 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKE------RPNLFYFHGDVADPLTLKKFVEYAME----   71 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTT------CTTEEEEECCTTSHHHHHHHHHHHHH----
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh------cCCEEEEEecCCCHHHHHHHHHHHHH----
Confidence            48999999999999999999999999999999998877654433      45788999999999999999999998    


Q ss_pred             cCCCCCeeEEEecCCcc--cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017812          139 SDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  216 (365)
Q Consensus       139 ~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~  216 (365)
                        .+++||+||||||+.  .+..+++.++|++++++|+.|+|+++|+++|+|++++  |+||++||.++.          
T Consensus        72 --~~g~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~--G~IInisS~~~~----------  137 (247)
T 3ged_A           72 --KLQRIDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNK--GRIINIASTRAF----------  137 (247)
T ss_dssp             --HHSCCCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT--CEEEEECCGGGT----------
T ss_pred             --HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC--CcEEEEeecccc----------
Confidence              558899999999986  4556889999999999999999999999999998865  999999999998          


Q ss_pred             cccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhcC
Q 017812          217 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGL  296 (365)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  296 (365)
                                .+.++..+|++||+|+.+|+|+|+.|++   + ||+||+|+||+|+|++..+.....     ....|++|
T Consensus       138 ----------~~~~~~~~Y~asKaal~~ltk~lA~ela---~-~IrVN~I~PG~i~t~~~~~~~~~~-----~~~~Pl~R  198 (247)
T 3ged_A          138 ----------QSEPDSEAYASAKGGIVALTHALAMSLG---P-DVLVNCIAPGWINVTEQQEFTQED-----CAAIPAGK  198 (247)
T ss_dssp             ----------SCCTTCHHHHHHHHHHHHHHHHHHHHHT---T-TSEEEEEEECSBCCCC---CCHHH-----HHTSTTSS
T ss_pred             ----------cCCCCCHHHHHHHHHHHHHHHHHHHHHC---C-CCEEEEEecCcCCCCCcHHHHHHH-----HhcCCCCC
Confidence                      8889999999999999999999999997   5 999999999999999987654322     23468999


Q ss_pred             CCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcccc
Q 017812          297 LQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  331 (365)
Q Consensus       297 ~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~~  331 (365)
                      +.+|+|+|+++++++. ++..+|+.+.+|+|...+
T Consensus       199 ~g~pediA~~v~fL~s-~~~iTG~~i~VDGG~s~r  232 (247)
T 3ged_A          199 VGTPKDISNMVLFLCQ-QDFITGETIIVDGGMSKR  232 (247)
T ss_dssp             CBCHHHHHHHHHHHHH-CSSCCSCEEEESTTGGGC
T ss_pred             CcCHHHHHHHHHHHHh-CCCCCCCeEEECcCHHHh
Confidence            9999999999997663 457899999999997653

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=100.00  E-value=4.8e-47  Score=341.29  Aligned_cols=240  Identities=15%  Similarity=0.115  Sum_probs=210.9

Q ss_pred             CCCCCCEEEEecCCC--hHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHH
Q 017812           55 TGIKRPVCIVTGATS--GLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  132 (365)
Q Consensus        55 ~~~~~k~vlITGass--GIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~  132 (365)
                      .+|+||++|||||+|  |||+++|++|+++|++|++++|+++.++++.+++.+.+ +.++.++++|++|+++++++++++
T Consensus         2 ~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~   80 (256)
T 4fs3_A            2 LNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLN-QPEAHLYQIDVQSDEEVINGFEQI   80 (256)
T ss_dssp             CCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGT-CSSCEEEECCTTCHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-CCcEEEEEccCCCHHHHHHHHHHH
Confidence            468999999999875  99999999999999999999999999999988887764 457899999999999999999999


Q ss_pred             HHHHhccCCCCCeeEEEecCCccc------CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccc
Q 017812          133 QQWLLDSDMHSSIQLLINNAGILA------TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHR  206 (365)
Q Consensus       133 ~~~~~~~~~~~~id~lv~nAG~~~------~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~  206 (365)
                      .+      .++++|+||||||+..      +..+.+.++|+.++++|+.+++.+++.+.|++++   .|+||++||.++.
T Consensus        81 ~~------~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~---~G~IVnisS~~~~  151 (256)
T 4fs3_A           81 GK------DVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPE---GGSIVATTYLGGE  151 (256)
T ss_dssp             HH------HHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTT---CEEEEEEECGGGT
T ss_pred             HH------HhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc---CCEEEEEeccccc
Confidence            98      5689999999999853      2346788999999999999999999999998765   5899999999998


Q ss_pred             ccccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHH-H
Q 017812          207 NVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLS-L  285 (365)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~-~  285 (365)
                                          .+.+++.+|++||+|+++|+++|+.|++   +.|||||+|+||+|+|++.+....... .
T Consensus       152 --------------------~~~~~~~~Y~asKaal~~ltr~lA~Ela---~~gIrVN~V~PG~i~T~~~~~~~~~~~~~  208 (256)
T 4fs3_A          152 --------------------FAVQNYNVMGVAKASLEANVKYLALDLG---PDNIRVNAISAGPIRTLSAKGVGGFNTIL  208 (256)
T ss_dssp             --------------------SCCTTTHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECCCCSGGGTTCTTHHHHH
T ss_pred             --------------------cCcccchhhHHHHHHHHHHHHHHHHHhC---ccCeEEEEEecCCCCChhhhhccCCHHHH
Confidence                                8889999999999999999999999998   899999999999999999887654332 2


Q ss_pred             HHHHHHHHhcCCCCHHHHHHHHHHHhcCCC---CCcccEEeCCCCcc
Q 017812          286 MAFTVLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRT  329 (365)
Q Consensus       286 ~~~~~~~~~~~~~~p~e~A~~i~~~~l~~~---~~~G~~~~~~~g~~  329 (365)
                      .......|++|+.+|||+|++++  ||+|+   ..+|+.+.+|+|..
T Consensus       209 ~~~~~~~Pl~R~g~peevA~~v~--fL~Sd~a~~iTG~~i~VDGG~~  253 (256)
T 4fs3_A          209 KEIKERAPLKRNVDQVEVGKTAA--YLLSDLSSGVTGENIHVDSGFH  253 (256)
T ss_dssp             HHHHHHSTTSSCCCHHHHHHHHH--HHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHhcCCCCCCcCHHHHHHHHH--HHhCchhcCccCCEEEECcCHH
Confidence            33445578999999999999999  55555   45899999999864

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=100.00  E-value=1.2e-47  Score=344.66  Aligned_cols=232  Identities=20%  Similarity=0.235  Sum_probs=197.4

Q ss_pred             CCCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHH
Q 017812           53 PITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  132 (365)
Q Consensus        53 ~~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~  132 (365)
                      ++.+|+||++|||||++|||+++|++|+++|++|++++|+.++.            ..+..++++|++|+++++++++++
T Consensus         5 dl~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~------------~~~~~~~~~Dv~~~~~v~~~~~~~   72 (261)
T 4h15_A            5 EFLNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG------------LPEELFVEADLTTKEGCAIVAEAT   72 (261)
T ss_dssp             CCCCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT------------SCTTTEEECCTTSHHHHHHHHHHH
T ss_pred             hccCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC------------CCcEEEEEcCCCCHHHHHHHHHHH
Confidence            44578999999999999999999999999999999999986521            224457899999999999999999


Q ss_pred             HHHHhccCCCCCeeEEEecCCccc----CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccc
Q 017812          133 QQWLLDSDMHSSIQLLINNAGILA----TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNV  208 (365)
Q Consensus       133 ~~~~~~~~~~~~id~lv~nAG~~~----~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~  208 (365)
                      .+      .+++||+||||||+..    +..+++.++|++++++|+.|+++++|+++|+|++++ .|+||++||.++.  
T Consensus        73 ~~------~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~Iv~isS~~~~--  143 (261)
T 4h15_A           73 RQ------RLGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARG-SGVVVHVTSIQRV--  143 (261)
T ss_dssp             HH------HTSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT--
T ss_pred             HH------HcCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcC-CceEEEEEehhhc--
Confidence            98      6789999999999753    456789999999999999999999999999999876 7999999999987  


Q ss_pred             ccccCCCccccccccccCCCCC-hhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHH---
Q 017812          209 FNAQVNNETITGKFFLRSKCYP-CARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLS---  284 (365)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~-~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~---  284 (365)
                                        .+.+ +...|++||+|+++|+++|+.|++   +.||+||+|+||+|+|++.........   
T Consensus       144 ------------------~~~~~~~~~Y~asKaal~~lt~~lA~Ela---~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~  202 (261)
T 4h15_A          144 ------------------LPLPESTTAYAAAKAALSTYSKAMSKEVS---PKGVRVVRVSPGWIETEASVRLAERLAKQA  202 (261)
T ss_dssp             ------------------SCCTTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECCBCCHHHHHHHHHHHHHT
T ss_pred             ------------------cCCCCccHHHHHHHHHHHHHHHHHHHHhh---hhCeEEEEEeCCCcCCcchhhhhHHHHHhh
Confidence                              6655 578999999999999999999998   899999999999999998765322110   


Q ss_pred             ----------HHHHHHHHHhcCCCCHHHHHHHHHHHhcCCC---CCcccEEeCCCCc
Q 017812          285 ----------LMAFTVLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGR  328 (365)
Q Consensus       285 ----------~~~~~~~~~~~~~~~p~e~A~~i~~~~l~~~---~~~G~~~~~~~g~  328 (365)
                                ........|++|+.+|||+|+.++  ||+|+   ..+|+.+.+|+|.
T Consensus       203 ~~~~~~~~~~~~~~~~~~PlgR~g~peevA~~v~--fLaS~~a~~itG~~i~VDGG~  257 (261)
T 4h15_A          203 GTDLEGGKKIIMDGLGGIPLGRPAKPEEVANLIA--FLASDRAASITGAEYTIDGGT  257 (261)
T ss_dssp             TCCHHHHHHHHHHHTTCCTTSSCBCHHHHHHHHH--HHHSGGGTTCCSCEEEESTTC
T ss_pred             ccchhhHHHHHHHHhcCCCCCCCcCHHHHHHHHH--HHhCchhcCccCcEEEECCcC
Confidence                      011112247899999999999999  55555   4589999999985

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=100.00  E-value=3.4e-45  Score=331.11  Aligned_cols=245  Identities=21%  Similarity=0.234  Sum_probs=212.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+..++.++.++++|++|+++++++++++.+ 
T Consensus         5 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~-   83 (265)
T 3lf2_A            5 DLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACER-   83 (265)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHH-
Confidence            5789999999999999999999999999999999999999999999998866666799999999999999999999988 


Q ss_pred             HhccCCCCCeeEEEecCCcc--cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                           .++++|+||||||+.  .+..+.+.++|++++++|+.|+++++++++|+|++++ .|+||++||.++.       
T Consensus        84 -----~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~-------  150 (265)
T 3lf2_A           84 -----TLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRA-DAAIVCVNSLLAS-------  150 (265)
T ss_dssp             -----HHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTST-TEEEEEEEEGGGT-------
T ss_pred             -----HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccC-CeEEEEECCcccC-------
Confidence                 458899999999986  3456789999999999999999999999999998876 7999999999988       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh--------HHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS--------FLSL  285 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~--------~~~~  285 (365)
                                   .+.++...|++||+|+++|+++++.|++   +.||+||+|+||+|+|++.+....        ....
T Consensus       151 -------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~  214 (265)
T 3lf2_A          151 -------------QPEPHMVATSAARAGVKNLVRSMAFEFA---PKGVRVNGILIGLVESGQWRRRFEAREERELDWAQW  214 (265)
T ss_dssp             -------------SCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCCHHHHHHHTC------CHHHH
T ss_pred             -------------CCCCCchhhHHHHHHHHHHHHHHHHHhc---ccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHH
Confidence                         7888999999999999999999999998   789999999999999998764321        1111


Q ss_pred             HHHHHH---HHhcCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCccc
Q 017812          286 MAFTVL---KLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTV  330 (365)
Q Consensus       286 ~~~~~~---~~~~~~~~p~e~A~~i~~~~l~-~~~~~G~~~~~~~g~~~  330 (365)
                      ......   .|++|+.+|+|+|+++++++.. +...+|+.+.+|+|...
T Consensus       215 ~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~~  263 (265)
T 3lf2_A          215 TAQLARNKQIPLGRLGKPIEAARAILFLASPLSAYTTGSHIDVSGGLSR  263 (265)
T ss_dssp             HHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSEEEEESSSCCC
T ss_pred             HHHHhhccCCCcCCCcCHHHHHHHHHHHhCchhcCcCCCEEEECCCCcC
Confidence            112222   5788999999999999954432 13568999999998754

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=100.00  E-value=4e-45  Score=328.92  Aligned_cols=245  Identities=21%  Similarity=0.225  Sum_probs=212.4

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.  +.++.++++|++|+++++++++++.+
T Consensus         8 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~   85 (256)
T 3gaf_A            8 FHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQA--GGKAIGLECNVTDEQHREAVIKAALD   85 (256)
T ss_dssp             TCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            4588999999999999999999999999999999999999999999988765  46789999999999999999999998


Q ss_pred             HHhccCCCCCeeEEEecCCcccCC-CCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          135 WLLDSDMHSSIQLLINNAGILATS-SRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~~~-~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                            .++++|+||||||+..+. .+.+.+++++++++|+.|+++++++++|+|++++ .|+||++||.++.       
T Consensus        86 ------~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~-------  151 (256)
T 3gaf_A           86 ------QFGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAG-GGAILNISSMAGE-------  151 (256)
T ss_dssp             ------HHSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGT-------
T ss_pred             ------HcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHHHc-------
Confidence                  457899999999987432 2788999999999999999999999999998876 7999999999988       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  293 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  293 (365)
                                   .+.++...|++||+|+++|+++++.|++   +.||+||+|+||+|+|++.+...............|
T Consensus       152 -------------~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p  215 (256)
T 3gaf_A          152 -------------NTNVRMASYGSSKAAVNHLTRNIAFDVG---PMGIRVNAIAPGAIKTDALATVLTPEIERAMLKHTP  215 (256)
T ss_dssp             -------------CCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECCBCCHHHHHHCCHHHHHHHHTTCT
T ss_pred             -------------CCCCCchHHHHHHHHHHHHHHHHHHHHh---hhCcEEEEEEEccccCchhhhccCHHHHHHHHhcCC
Confidence                         7888899999999999999999999998   789999999999999998765422222222333457


Q ss_pred             hcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcccc
Q 017812          294 LGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVN  331 (365)
Q Consensus       294 ~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~~  331 (365)
                      ++|+.+|+|+|+++++++... ...+|+.+..|+|...+
T Consensus       216 ~~r~~~~~dva~~~~~L~s~~~~~itG~~i~vdgG~~~~  254 (256)
T 3gaf_A          216 LGRLGEAQDIANAALFLCSPAAAWISGQVLTVSGGGVQE  254 (256)
T ss_dssp             TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSCCC
T ss_pred             CCCCCCHHHHHHHHHHHcCCcccCccCCEEEECCCcccc
Confidence            789999999999999544322 35689999999998763

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=100.00  E-value=3.8e-44  Score=322.94  Aligned_cols=246  Identities=18%  Similarity=0.233  Sum_probs=212.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEE-ecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLV-GRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      ++|++|||||++|||+++|++|+++|++|+++ +|+.++++++.+++.+.  +.++.++++|++|+++++++++++.+  
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~--   78 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKL--GVKVLVVKANVGQPAKIKEMFQQIDE--   78 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHHHH--
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHH--
Confidence            58999999999999999999999999999997 89999999998888765  46799999999999999999999988  


Q ss_pred             hccCCCCCeeEEEecCCcc--cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017812          137 LDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  214 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~  214 (365)
                          .++++|+||||||+.  .+..+.+.++|++++++|+.|+++++++++|+|++++ .|+||++||.++.        
T Consensus        79 ----~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~--------  145 (258)
T 3oid_A           79 ----TFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNG-GGHIVSISSLGSI--------  145 (258)
T ss_dssp             ----HHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEEEEGGGT--------
T ss_pred             ----HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECchhhC--------
Confidence                457899999999975  3456789999999999999999999999999999876 7999999999988        


Q ss_pred             CccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHH-HHHHHHHHH
Q 017812          215 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLS-LMAFTVLKL  293 (365)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~-~~~~~~~~~  293 (365)
                                  .+.++...|++||+|+++|+++++.|++   +.||+||+|+||+|+|++.+....... ........|
T Consensus       146 ------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p  210 (258)
T 3oid_A          146 ------------RYLENYTTVGVSKAALEALTRYLAVELS---PKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQNTP  210 (258)
T ss_dssp             ------------SBCTTCHHHHHHHHHHHHHHHHHHHHTG---GGTEEEEEEEECCBCSGGGGGCTTHHHHHHHHHHHCT
T ss_pred             ------------CCCCCcHHHHHHHHHHHHHHHHHHHHHh---hcCcEEEEEeeCCCcChhhhhcccCHHHHHHHHhcCC
Confidence                        7888899999999999999999999998   789999999999999999887654322 223334467


Q ss_pred             hcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccccCCcc
Q 017812          294 LGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVNSSAL  335 (365)
Q Consensus       294 ~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~~~~~~  335 (365)
                      ++|+.+|+|+|+++++++... ...+|+.+.+|+|.....+..
T Consensus       211 ~~r~~~~~dva~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~  253 (258)
T 3oid_A          211 AGRMVEIKDMVDTVEFLVSSKADMIRGQTIIVDGGRSLLVLEH  253 (258)
T ss_dssp             TSSCBCHHHHHHHHHHHTSSTTTTCCSCEEEESTTGGGBCC--
T ss_pred             CCCCcCHHHHHHHHHHHhCcccCCccCCEEEECCCccCCCCCC
Confidence            889999999999999443322 256899999999988765544

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=100.00  E-value=3.7e-44  Score=322.40  Aligned_cols=242  Identities=23%  Similarity=0.298  Sum_probs=210.0

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      .+++||++|||||++|||+++|++|+++|++|++++|++++++++.+++     +.++.++++|++|+++++++++++.+
T Consensus         4 ~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~   78 (255)
T 4eso_A            4 GNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF-----GPRVHALRSDIADLNEIAVLGAAAGQ   78 (255)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----GGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCcceEEEccCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999999888887776     45789999999999999999999988


Q ss_pred             HHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017812          135 WLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~  212 (365)
                            .++++|+||||||+..  +..+.+.++|++++++|+.|+++++++++|+|++   .|+||++||.++.      
T Consensus        79 ------~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~---~g~iv~isS~~~~------  143 (255)
T 4eso_A           79 ------TLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIRE---GGSIVFTSSVADE------  143 (255)
T ss_dssp             ------HHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEECCGGGS------
T ss_pred             ------HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhc---CCEEEEECChhhc------
Confidence                  4578999999999863  4557899999999999999999999999999976   4899999999988      


Q ss_pred             CCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc--hhHHH---HHH
Q 017812          213 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV--PSFLS---LMA  287 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~--~~~~~---~~~  287 (365)
                                    .+.++...|++||+|+++|+++++.|++   +.||+||+|+||+|+|++.+..  +....   ...
T Consensus       144 --------------~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~  206 (255)
T 4eso_A          144 --------------GGHPGMSVYSASKAALVSFASVLAAELL---PRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTL  206 (255)
T ss_dssp             --------------SBCTTBHHHHHHHHHHHHHHHHHHHHTG---GGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHH
T ss_pred             --------------CCCCCchHHHHHHHHHHHHHHHHHHHHh---hhCcEEEEEecCcccCcccccccCChhhHHHHHHH
Confidence                          7888999999999999999999999998   7899999999999999987542  22111   112


Q ss_pred             HHHHHHhcCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccccCC
Q 017812          288 FTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSS  333 (365)
Q Consensus       288 ~~~~~~~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~~~~  333 (365)
                      .....|++|+.+|+|+|+++++++..+...+|+.+.+|+|.....+
T Consensus       207 ~~~~~p~~r~~~pedvA~~v~~L~s~~~~itG~~i~vdGG~~~~l~  252 (255)
T 4eso_A          207 GDNITPMKRNGTADEVARAVLFLAFEATFTTGAKLAVDGGLGQKLS  252 (255)
T ss_dssp             HHHHSTTSSCBCHHHHHHHHHHHHHTCTTCCSCEEEESTTTTTTBC
T ss_pred             HhccCCCCCCcCHHHHHHHHHHHcCcCcCccCCEEEECCCccccCc
Confidence            2334578899999999999997666555778999999999877544

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=100.00  E-value=9.9e-45  Score=324.65  Aligned_cols=240  Identities=21%  Similarity=0.279  Sum_probs=208.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++     +.++.++++|++|+++++++++++.+ 
T Consensus         3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~-   76 (247)
T 3rwb_A            3 RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI-----GKKARAIAADISDPGSVKALFAEIQA-   76 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-----CTTEEECCCCTTCHHHHHHHHHHHHH-
T ss_pred             CcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceEEEEcCCCCHHHHHHHHHHHHH-
Confidence            578999999999999999999999999999999999999988887776     55789999999999999999999998 


Q ss_pred             HhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                           .++++|+||||||+..  +..+.+.++|++++++|+.|+++++++++|+|++++..|+||++||.++.       
T Consensus        77 -----~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-------  144 (247)
T 3rwb_A           77 -----LTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFF-------  144 (247)
T ss_dssp             -----HHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHH-------
T ss_pred             -----HCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhc-------
Confidence                 4578999999999863  34578999999999999999999999999999876546899999999988       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  293 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  293 (365)
                                   .+.++...|++||+|+++|+++++.|++   +.||+||+|+||+|+|++.+..+............+
T Consensus       145 -------------~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~  208 (247)
T 3rwb_A          145 -------------AGTPNMAAYVAAKGGVIGFTRALATELG---KYNITANAVTPGLIESDGVKASPHNEAFGFVEMLQA  208 (247)
T ss_dssp             -------------HTCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCCHHHHTSGGGGGHHHHHHHSS
T ss_pred             -------------cCCCCchhhHHHHHHHHHHHHHHHHHhh---hcCeEEEEEeeCcCcCccccccChhHHHHHHhcccc
Confidence                         7788899999999999999999999998   889999999999999998876544332222223357


Q ss_pred             hcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017812          294 LGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  329 (365)
Q Consensus       294 ~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~  329 (365)
                      ++++.+|+|+|+.+++++... ...+|+.+..|+|..
T Consensus       209 ~~r~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~  245 (247)
T 3rwb_A          209 MKGKGQPEHIADVVSFLASDDARWITGQTLNVDAGMV  245 (247)
T ss_dssp             SCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSS
T ss_pred             cCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCcc
Confidence            788999999999999544322 256899999998864

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=3.3e-44  Score=324.08  Aligned_cols=250  Identities=22%  Similarity=0.271  Sum_probs=213.8

Q ss_pred             CCCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHH
Q 017812           53 PITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  132 (365)
Q Consensus        53 ~~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~  132 (365)
                      ++.+++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.+ ..++.++++|++|+++++++++++
T Consensus         4 ~m~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~   82 (262)
T 3pk0_A            4 SMFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLG-SGKVIGVQTDVSDRAQCDALAGRA   82 (262)
T ss_dssp             CTTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTS-SSCEEEEECCTTSHHHHHHHHHHH
T ss_pred             CccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhC-CCcEEEEEcCCCCHHHHHHHHHHH
Confidence            3456899999999999999999999999999999999999999999999987753 358999999999999999999999


Q ss_pred             HHHHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc
Q 017812          133 QQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN  210 (365)
Q Consensus       133 ~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~  210 (365)
                      .+      .++++|+||||||+..  +..+.+.++|++++++|+.|+++++++++|+|++++ .|+||++||.++.    
T Consensus        83 ~~------~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~----  151 (262)
T 3pk0_A           83 VE------EFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASG-SGRVVLTSSITGP----  151 (262)
T ss_dssp             HH------HHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHS-SCEEEEECCSBTT----
T ss_pred             HH------HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEechhhc----
Confidence            88      4578999999999863  456789999999999999999999999999998876 6999999998874    


Q ss_pred             ccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHH
Q 017812          211 AQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTV  290 (365)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~  290 (365)
                                     ..+.++...|++||+|+++|+++++.|++   +.||+||+|+||+|.|++........ ......
T Consensus       152 ---------------~~~~~~~~~Y~asK~a~~~l~~~la~e~~---~~gi~vn~v~PG~v~t~~~~~~~~~~-~~~~~~  212 (262)
T 3pk0_A          152 ---------------ITGYPGWSHYGATKAAQLGFMRTAAIELA---PHKITVNAIMPGNIMTEGLLENGEEY-IASMAR  212 (262)
T ss_dssp             ---------------TBCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEECSBCCHHHHTTCHHH-HHHHHT
T ss_pred             ---------------cCCCCCChhhHHHHHHHHHHHHHHHHHHH---hhCcEEEEEEeCcCcCccccccCHHH-HHHHHh
Confidence                           14567889999999999999999999998   78999999999999999876543321 122233


Q ss_pred             HHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccccCC
Q 017812          291 LKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVNSS  333 (365)
Q Consensus       291 ~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~~~~  333 (365)
                      ..|++|+.+|+|+|+++++++... ...+|+.+.+|+|..+..+
T Consensus       213 ~~p~~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdGG~~~~~~  256 (262)
T 3pk0_A          213 SIPAGALGTPEDIGHLAAFLATKEAGYITGQAIAVDGGQVLPES  256 (262)
T ss_dssp             TSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTCCSS
T ss_pred             cCCCCCCcCHHHHHHHHHHHhCccccCCcCCEEEECCCeecCcc
Confidence            357788999999999999544322 3578999999999887543

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=100.00  E-value=2.1e-44  Score=322.79  Aligned_cols=240  Identities=22%  Similarity=0.273  Sum_probs=207.8

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHH
Q 017812           54 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  133 (365)
Q Consensus        54 ~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~  133 (365)
                      +.+++||++|||||++|||+++|++|+++|++|++++|++++++++.+++.     .+...+++|++|+++++++++++.
T Consensus         4 ~~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dv~d~~~v~~~~~~~~   78 (248)
T 3op4_A            4 FMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLG-----DNGKGMALNVTNPESIEAVLKAIT   78 (248)
T ss_dssp             TTCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG-----GGEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc-----ccceEEEEeCCCHHHHHHHHHHHH
Confidence            345789999999999999999999999999999999999999888887773     356889999999999999999999


Q ss_pred             HHHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017812          134 QWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  211 (365)
Q Consensus       134 ~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~  211 (365)
                      +      .++++|+||||||+..  +..+.+.++|++++++|+.|+++++++++|+|++++ .|+||++||.++.     
T Consensus        79 ~------~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~-----  146 (248)
T 3op4_A           79 D------EFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKR-QGRIINVGSVVGT-----  146 (248)
T ss_dssp             H------HHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHH-----
T ss_pred             H------HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhhc-----
Confidence            8      4588999999999874  345779999999999999999999999999998766 6999999999988     


Q ss_pred             cCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHH
Q 017812          212 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVL  291 (365)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~  291 (365)
                                     .+.++...|++||+|+++|+++++.|++   +.||+||+|+||+|+|++.+...... .......
T Consensus       147 ---------------~~~~~~~~Y~asK~a~~~l~~~la~e~~---~~gi~vn~v~PG~v~T~~~~~~~~~~-~~~~~~~  207 (248)
T 3op4_A          147 ---------------MGNAGQANYAAAKAGVIGFTKSMAREVA---SRGVTVNTVAPGFIETDMTKALNDEQ-RTATLAQ  207 (248)
T ss_dssp             ---------------HCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBSSTTTTTSCHHH-HHHHHHT
T ss_pred             ---------------CCCCCChHHHHHHHHHHHHHHHHHHHHH---HhCeEEEEEeeCCCCCchhhhcCHHH-HHHHHhc
Confidence                           7788899999999999999999999998   78999999999999999987764432 2222334


Q ss_pred             HHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017812          292 KLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  329 (365)
Q Consensus       292 ~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~  329 (365)
                      .|.+++.+|+|+|+++++++... ...+|+.+..|+|..
T Consensus       208 ~p~~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdgG~~  246 (248)
T 3op4_A          208 VPAGRLGDPREIASAVAFLASPEAAYITGETLHVNGGMY  246 (248)
T ss_dssp             CTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSS
T ss_pred             CCCCCCcCHHHHHHHHHHHcCCccCCccCcEEEECCCee
Confidence            57788999999999999544322 246799999998864

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=100.00  E-value=1.9e-44  Score=327.92  Aligned_cols=261  Identities=16%  Similarity=0.177  Sum_probs=219.8

Q ss_pred             CCCCCEEEEecCC--ChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHH
Q 017812           56 GIKRPVCIVTGAT--SGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  133 (365)
Q Consensus        56 ~~~~k~vlITGas--sGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~  133 (365)
                      ++++|+++||||+  +|||+++|++|+++|++|++++|+.+ .++..+++.+..+  .+.++++|++|+++++++++++.
T Consensus         3 ~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~--~~~~~~~D~~~~~~v~~~~~~~~   79 (275)
T 2pd4_A            3 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELN--SPYVYELDVSKEEHFKSLYNSVK   79 (275)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTT--CCCEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhcC--CcEEEEcCCCCHHHHHHHHHHHH
Confidence            4789999999999  99999999999999999999999986 5555666655432  37899999999999999999998


Q ss_pred             HHHhccCCCCCeeEEEecCCccc------CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccc
Q 017812          134 QWLLDSDMHSSIQLLINNAGILA------TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRN  207 (365)
Q Consensus       134 ~~~~~~~~~~~id~lv~nAG~~~------~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~  207 (365)
                      +      .++++|+||||||+..      +..+.+.+++++++++|+.|+++++++++|.|++   .|+||++||.++. 
T Consensus        80 ~------~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~isS~~~~-  149 (275)
T 2pd4_A           80 K------DLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN---GASVLTLSYLGST-  149 (275)
T ss_dssp             H------HTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEECGGGT-
T ss_pred             H------HcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc---CCEEEEEecchhc-
Confidence            8      5689999999999864      3447789999999999999999999999999975   4899999999887 


Q ss_pred             cccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHH-H
Q 017812          208 VFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSL-M  286 (365)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~-~  286 (365)
                                         .+.++...|++||+|+++|+++++.|++   +.||+||+|+||+|+|++.+........ .
T Consensus       150 -------------------~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~  207 (275)
T 2pd4_A          150 -------------------KYMAHYNVMGLAKAALESAVRYLAVDLG---KHHIRVNALSAGPIRTLASSGIADFRMILK  207 (275)
T ss_dssp             -------------------SBCTTCHHHHHHHHHHHHHHHHHHHHHH---TTTCEEEEEEECCCCCTTGGGSTTHHHHHH
T ss_pred             -------------------CCCCCchhhHHHHHHHHHHHHHHHHHhh---hcCeEEEEEeeCccccchhhhccccHHHHH
Confidence                               6778889999999999999999999998   7899999999999999998764322111 1


Q ss_pred             HHHHHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc-cCCcccCCHHHHHHHHHHHHH
Q 017812          287 AFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV-NSSALSFNSKLAGELWTTSCN  351 (365)
Q Consensus       287 ~~~~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~-~~~~~~~d~~~~~~lw~~~~~  351 (365)
                      ......|++++.+|+|+|+.+++++... ...+|+++..++|... .++....|++.+++||+.+++
T Consensus       208 ~~~~~~p~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdgg~~~~~~~~~~~~~~~~~~lw~~s~~  274 (275)
T 2pd4_A          208 WNEINAPLRKNVSLEEVGNAGMYLLSSLSSGVSGEVHFVDAGYHVMGMGAVEEKDNKATLLWDLHKE  274 (275)
T ss_dssp             HHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGBSSCCCTTCTTTTCCHHHHSSC
T ss_pred             HHHhcCCcCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCcccCCCChhhcCcccchhhhhhhcc
Confidence            1222346778899999999999655432 3568999998988765 466778899999999999865

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=100.00  E-value=1.3e-44  Score=327.35  Aligned_cols=248  Identities=21%  Similarity=0.242  Sum_probs=212.8

Q ss_pred             CCCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHH
Q 017812           53 PITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  132 (365)
Q Consensus        53 ~~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~  132 (365)
                      .+.+++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.. +.++.++++|++|+++++++++++
T Consensus        14 ~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~   92 (266)
T 4egf_A           14 GVLRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQF-GTDVHTVAIDLAEPDAPAELARRA   92 (266)
T ss_dssp             GGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTSTTHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCcEEEEEecCCCHHHHHHHHHHH
Confidence            3456899999999999999999999999999999999999999999988887643 467999999999999999999999


Q ss_pred             HHHHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc
Q 017812          133 QQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN  210 (365)
Q Consensus       133 ~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~  210 (365)
                      .+      .++++|+||||||+..  +..+.+.++|++++++|+.|+++++++++|+|++++..|+||++||.++.    
T Consensus        93 ~~------~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~----  162 (266)
T 4egf_A           93 AE------AFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAAL----  162 (266)
T ss_dssp             HH------HHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT----
T ss_pred             HH------HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhc----
Confidence            98      4578999999999874  34578999999999999999999999999999876546899999999988    


Q ss_pred             ccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh-HHHHHHHH
Q 017812          211 AQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS-FLSLMAFT  289 (365)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~-~~~~~~~~  289 (365)
                                      .+.++...|++||+|+++|+++++.|++   +.||+||+|+||+|+|++.+.... ........
T Consensus       163 ----------------~~~~~~~~Y~asK~a~~~l~~~la~e~~---~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~  223 (266)
T 4egf_A          163 ----------------APLPDHYAYCTSKAGLVMATKVLARELG---PHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMI  223 (266)
T ss_dssp             ----------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEESCBCSHHHHHHTCSHHHHHHHH
T ss_pred             ----------------cCCCCChHHHHHHHHHHHHHHHHHHHHh---hhCeEEEEEEeCCCcCchhhhhccChHHHHHHH
Confidence                            7888899999999999999999999998   789999999999999998764321 11122223


Q ss_pred             HHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017812          290 VLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  330 (365)
Q Consensus       290 ~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~  330 (365)
                      ...|++|+.+|+|+|+++++++... ...+|+.+.+|+|..+
T Consensus       224 ~~~p~~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdGG~~~  265 (266)
T 4egf_A          224 ARIPLGRFAVPHEVSDAVVWLASDAASMINGVDIPVDGGYTM  265 (266)
T ss_dssp             TTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             hcCCCCCCcCHHHHHHHHHHHhCchhcCccCcEEEECCCccC
Confidence            3357788999999999999544322 3568999999998754

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=100.00  E-value=2.7e-44  Score=326.03  Aligned_cols=245  Identities=18%  Similarity=0.230  Sum_probs=213.5

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHH
Q 017812           54 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  133 (365)
Q Consensus        54 ~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~  133 (365)
                      +.+++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.  +.++.++++|++|+++++++++++.
T Consensus        21 ~~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~   98 (271)
T 4ibo_A           21 IFDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNV--GHDAEAVAFDVTSESEIIEAFARLD   98 (271)
T ss_dssp             GGCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHT--TCCEEECCCCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHH
Confidence            34689999999999999999999999999999999999999999999998765  4578999999999999999999998


Q ss_pred             HHHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017812          134 QWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  211 (365)
Q Consensus       134 ~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~  211 (365)
                      +      .++++|+||||||+..  +..+.+.++|++++++|+.|+++++++++|.|++++ .|+||++||.++.     
T Consensus        99 ~------~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iV~isS~~~~-----  166 (271)
T 4ibo_A           99 E------QGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRG-YGKIVNIGSLTSE-----  166 (271)
T ss_dssp             H------HTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT-----
T ss_pred             H------HCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEccHHhC-----
Confidence            8      5689999999999863  445789999999999999999999999999998876 6899999999988     


Q ss_pred             cCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH-HHHHHHHH
Q 017812          212 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF-LSLMAFTV  290 (365)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~  290 (365)
                                     .+.++...|++||+|+++|+++++.|++   +.||+||+|+||+|+|++.+..... ........
T Consensus       167 ---------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~  228 (271)
T 4ibo_A          167 ---------------LARATVAPYTVAKGGIKMLTRAMAAEWA---QYGIQANAIGPGYMLTDMNQALIDNPEFDAWVKA  228 (271)
T ss_dssp             ---------------SBCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCSGGGHHHHHCHHHHHHHHH
T ss_pred             ---------------CCCCCchhHHHHHHHHHHHHHHHHHHHh---hhCeEEEEEEeccEeCcchhhcccCHHHHHHHHh
Confidence                           7888899999999999999999999998   7899999999999999998754321 11222334


Q ss_pred             HHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017812          291 LKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  330 (365)
Q Consensus       291 ~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~  330 (365)
                      ..|++|+.+|+|+|+++++++... ...+|+.+.+|+|...
T Consensus       229 ~~p~~r~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~  269 (271)
T 4ibo_A          229 RTPAKRWGKPQELVGTAVFLSASASDYVNGQIIYVDGGMLS  269 (271)
T ss_dssp             HSTTCSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             cCCCCCCcCHHHHHHHHHHHhCccccCCCCcEEEECCCeec
Confidence            457889999999999999544322 3568999999999764

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=100.00  E-value=3.1e-44  Score=329.05  Aligned_cols=255  Identities=22%  Similarity=0.263  Sum_probs=217.5

Q ss_pred             CCCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHH
Q 017812           53 PITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  132 (365)
Q Consensus        53 ~~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~  132 (365)
                      .+.+++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.+ ..++.++++|++|+++++++++++
T Consensus        35 ~m~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~  113 (293)
T 3rih_A           35 VMFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELG-AGNVIGVRLDVSDPGSCADAARTV  113 (293)
T ss_dssp             CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSS-SSCEEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhC-CCcEEEEEEeCCCHHHHHHHHHHH
Confidence            4557899999999999999999999999999999999999999999999987653 357899999999999999999999


Q ss_pred             HHHHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc
Q 017812          133 QQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN  210 (365)
Q Consensus       133 ~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~  210 (365)
                      .+      .++++|+||||||+..  +..+.+.++|++++++|+.|+++++++++|.|++++ .|+||++||.++.    
T Consensus       114 ~~------~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iV~isS~~~~----  182 (293)
T 3rih_A          114 VD------AFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASG-RGRVILTSSITGP----  182 (293)
T ss_dssp             HH------HHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHS-SCEEEEECCSBTT----
T ss_pred             HH------HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEeChhhc----
Confidence            88      4588999999999873  455789999999999999999999999999998876 6999999999874    


Q ss_pred             ccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHH
Q 017812          211 AQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTV  290 (365)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~  290 (365)
                                     ..+.++...|++||+|+++|+++++.|++   +.||+||+|+||+|.|++........ ......
T Consensus       183 ---------------~~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gI~vn~v~PG~v~t~~~~~~~~~~-~~~~~~  243 (293)
T 3rih_A          183 ---------------VTGYPGWSHYGASKAAQLGFMRTAAIELA---PRGVTVNAILPGNILTEGLVDMGEEY-ISGMAR  243 (293)
T ss_dssp             ---------------TBBCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEECSBCCHHHHHTCHHH-HHHHHT
T ss_pred             ---------------cCCCCCCHHHHHHHHHHHHHHHHHHHHHh---hhCeEEEEEecCCCcCcchhhccHHH-HHHHHh
Confidence                           04567889999999999999999999998   78999999999999999876543221 122233


Q ss_pred             HHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccccCCcccCC
Q 017812          291 LKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVNSSALSFN  338 (365)
Q Consensus       291 ~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~~~~~~~~d  338 (365)
                      ..|++|+.+|+|+|+.+++++... ...+|+.+.+|+|..+..+..+.|
T Consensus       244 ~~p~~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~~~~~~~~~~  292 (293)
T 3rih_A          244 SIPMGMLGSPVDIGHLAAFLATDEAGYITGQAIVVDGGQVLPESPDAVN  292 (293)
T ss_dssp             TSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTCBSSGGGSC
T ss_pred             cCCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccCCCCCCCCC
Confidence            357788999999999999544322 356899999999999877666554

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=100.00  E-value=7.2e-44  Score=321.34  Aligned_cols=240  Identities=20%  Similarity=0.231  Sum_probs=207.7

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++     +.++.++++|++|+++++++++++.+
T Consensus         4 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~   78 (259)
T 4e6p_A            4 KRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI-----GPAAYAVQMDVTRQDSIDAAIAATVE   78 (259)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCCceEEEeeCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999999988888777     45689999999999999999999988


Q ss_pred             HHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017812          135 WLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~  212 (365)
                            .++++|+||||||+..  +..+.+.++|++++++|+.|+++++++++|.|.+++..|+||++||.++.      
T Consensus        79 ------~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~------  146 (259)
T 4e6p_A           79 ------HAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGR------  146 (259)
T ss_dssp             ------HSSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT------
T ss_pred             ------HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhc------
Confidence                  5689999999999864  44578999999999999999999999999999876546899999999988      


Q ss_pred             CCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh----------H
Q 017812          213 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS----------F  282 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~----------~  282 (365)
                                    .+.++...|++||+|+++|+++++.|++   ++||+||+|+||+|+|++.+....          .
T Consensus       147 --------------~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~  209 (259)
T 4e6p_A          147 --------------RGEALVAIYCATKAAVISLTQSAGLDLI---KHRINVNAIAPGVVDGEHWDGVDALFARYENRPRG  209 (259)
T ss_dssp             --------------SCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECCBCSTTHHHHHHHHHHHHTCCTT
T ss_pred             --------------cCCCCChHHHHHHHHHHHHHHHHHHHhh---hcCCEEEEEEECCCccchhhhhhhhhhhhccCChH
Confidence                          7888899999999999999999999998   889999999999999998764311          1


Q ss_pred             HHHHHHHHHHHhcCCCCHHHHHHHHHHHhcCCC---CCcccEEeCCCCccc
Q 017812          283 LSLMAFTVLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRTV  330 (365)
Q Consensus       283 ~~~~~~~~~~~~~~~~~p~e~A~~i~~~~l~~~---~~~G~~~~~~~g~~~  330 (365)
                      ..........|++|+.+|+|+|++++  +|.++   ..+|+.+.+|+|...
T Consensus       210 ~~~~~~~~~~p~~r~~~~~dva~~v~--~L~s~~~~~itG~~i~vdgG~~~  258 (259)
T 4e6p_A          210 EKKRLVGEAVPFGRMGTAEDLTGMAI--FLASAESDYIVSQTYNVDGGNWM  258 (259)
T ss_dssp             HHHHHHHHHSTTSSCBCTHHHHHHHH--HTTSGGGTTCCSCEEEESTTSSC
T ss_pred             HHHHHHhccCCCCCCcCHHHHHHHHH--HHhCCccCCCCCCEEEECcChhc
Confidence            11122233457789999999999999  55554   457999999998754

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=100.00  E-value=6.5e-44  Score=327.05  Aligned_cols=270  Identities=30%  Similarity=0.395  Sum_probs=213.4

Q ss_pred             CCCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHH
Q 017812           53 PITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  132 (365)
Q Consensus        53 ~~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~  132 (365)
                      ++.+++||+++||||++|||+++|++|+++|++|++++|+.++++++.+++     +.++.++++|++|++++++++++ 
T Consensus        10 ~~~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~d~~~v~~~~~~-   83 (291)
T 3rd5_A           10 DLPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM-----AGQVEVRELDLQDLSSVRRFADG-   83 (291)
T ss_dssp             GCCCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS-----SSEEEEEECCTTCHHHHHHHHHT-
T ss_pred             hccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----cCCeeEEEcCCCCHHHHHHHHHh-
Confidence            345689999999999999999999999999999999999998887776655     46899999999999999888774 


Q ss_pred             HHHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017812          133 QQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       133 ~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~  212 (365)
                               .+++|+||||||+..+..+.+.+++++++++|+.|+++++++++|.|.+     |||++||.++...... 
T Consensus        84 ---------~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~-----riv~isS~~~~~~~~~-  148 (291)
T 3rd5_A           84 ---------VSGADVLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTD-----RVVTVSSMAHWPGRIN-  148 (291)
T ss_dssp             ---------CCCEEEEEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEE-----EEEEECCGGGTTCCCC-
T ss_pred             ---------cCCCCEEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----heeEeechhhccCCCC-
Confidence                     3679999999999877777889999999999999999999999999963     9999999988743211 


Q ss_pred             CCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCC--eEEEEecCCcccCCccccchhHHHHHHHHH
Q 017812          213 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRH--VSVIAADPGVVKTNIMREVPSFLSLMAFTV  290 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~g--i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~  290 (365)
                        ..+...    ...+.++...|++||+|+++|++++++|+.   +.|  |+|++|+||+|+|++.+..+......  ..
T Consensus       149 --~~~~~~----~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~g~~i~v~~v~PG~v~T~~~~~~~~~~~~~--~~  217 (291)
T 3rd5_A          149 --LEDLNW----RSRRYSPWLAYSQSKLANLLFTSELQRRLT---AAGSPLRALAAHPGYSHTNLQGASGRKLGDA--LM  217 (291)
T ss_dssp             --SSCTTC----SSSCCCHHHHHHHHHHHHHHHHHHHHHHHH---HTTCCCEEEEECCSGGGSCC---------------
T ss_pred             --cccccc----cccCCCCcchHHHHHHHHHHHHHHHHHHHh---hCCCCEEEEEeeCCCCccccccccchHHHHH--HH
Confidence              111111    125678889999999999999999999997   556  99999999999999987754322111  11


Q ss_pred             HHHhcCCC-CHHHHHHHHHHHhcCCCCCcccEEeCCCCccc-----cCCcccCCHHHHHHHHHHHHHhhhc
Q 017812          291 LKLLGLLQ-SPEKGINSVLDAALAPPETSGVYFFGGKGRTV-----NSSALSFNSKLAGELWTTSCNLFIN  355 (365)
Q Consensus       291 ~~~~~~~~-~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~-----~~~~~~~d~~~~~~lw~~~~~~~~~  355 (365)
                      ..+.+++. +|+|+|+.+++++.. +..+|+++..++|...     ..+..+.|++.+++||+.++++++.
T Consensus       218 ~~~~~~~~~~~~~~A~~~~~l~~~-~~~~G~~~~vdgG~~~~~~~~~~~~~~~~~~~~~~lw~~~~~~~~~  287 (291)
T 3rd5_A          218 SAATRVVATDADFGARQTLYAASQ-DLPGDSFVGPRFGYLGRTQPVGRSRRAKDAGMAAALWALSEQLTKT  287 (291)
T ss_dssp             -------CHHHHHHHHHHHHHHHS-CCCTTCEEEETTSSSSCEEECCCCTGGGCHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHhCCHHHHHHHHHHHHcC-CCCCCceeCCcccccCccccCCCCcccCCHHHHHHHHHHHHHHHcc
Confidence            13344444 599999999987776 5789999998877543     4567889999999999999999864

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=100.00  E-value=7.2e-44  Score=324.73  Aligned_cols=250  Identities=25%  Similarity=0.305  Sum_probs=211.0

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++...  +.++.++++|++|+++++++++++.+
T Consensus         4 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~   81 (280)
T 3tox_A            4 SRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGG--GGEAAALAGDVGDEALHEALVELAVR   81 (280)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTT--TCCEEECCCCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999999999999888654  56889999999999999999999988


Q ss_pred             HHhccCCCCCeeEEEecCCcc---cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017812          135 WLLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  211 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~---~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~  211 (365)
                            .++++|+||||||+.   .+..+.+.+++++++++|+.|+++++++++|.|++++ .|+||++||..+.     
T Consensus        82 ------~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~-----  149 (280)
T 3tox_A           82 ------RFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALG-GGSLTFTSSFVGH-----  149 (280)
T ss_dssp             ------HHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCSBTT-----
T ss_pred             ------HcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEcChhhC-----
Confidence                  457899999999976   3445789999999999999999999999999999876 7899999998875     


Q ss_pred             cCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcccc-chh--HHHHHHH
Q 017812          212 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE-VPS--FLSLMAF  288 (365)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~-~~~--~~~~~~~  288 (365)
                                    ..+.++...|++||+|+++|+++++.|++   +.||+||+|+||+|+|++... .+.  .......
T Consensus       150 --------------~~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~  212 (280)
T 3tox_A          150 --------------TAGFAGVAPYAASKAGLIGLVQALAVELG---ARGIRVNALLPGGTDTPANFANLPGAAPETRGFV  212 (280)
T ss_dssp             --------------TBCCTTCHHHHHHHHHHHHHHHHHHHHHH---TTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHH
T ss_pred             --------------cCCCCCchhHHHHHHHHHHHHHHHHHHhh---hcCeEEEEEEECCCCCchhhhhccccCHHHHHHH
Confidence                          13567889999999999999999999998   889999999999999998765 211  1111222


Q ss_pred             HHHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccccCCcc
Q 017812          289 TVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVNSSAL  335 (365)
Q Consensus       289 ~~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~~~~~~  335 (365)
                      ....|++|+.+|+|+|+++++++... ...+|+.+.+|+|..+.....
T Consensus       213 ~~~~p~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~~~~~~a~  260 (280)
T 3tox_A          213 EGLHALKRIARPEEIAEAALYLASDGASFVTGAALLADGGASVTKAAE  260 (280)
T ss_dssp             HTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCC---
T ss_pred             hccCccCCCcCHHHHHHHHHHHhCccccCCcCcEEEECCCcccccccc
Confidence            23356788999999999999655332 356899999999988754433

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=100.00  E-value=4e-44  Score=324.81  Aligned_cols=243  Identities=25%  Similarity=0.318  Sum_probs=211.2

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.  +.++.++.+|++|.++++++++++.+
T Consensus        24 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~  101 (270)
T 3ftp_A           24 KTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQA--GLEGRGAVLNVNDATAVDALVESTLK  101 (270)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH--TCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEEeCCCHHHHHHHHHHHHH
Confidence            3588999999999999999999999999999999999999999999888776  45788999999999999999999988


Q ss_pred             HHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017812          135 WLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~  212 (365)
                            .++++|+||||||+..  +..+.+.++|++++++|+.|+++++++++|.|.+++ .|+||++||.++.      
T Consensus       102 ------~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~------  168 (270)
T 3ftp_A          102 ------EFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKAR-GGRIVNITSVVGS------  168 (270)
T ss_dssp             ------HHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHH------
T ss_pred             ------HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhC------
Confidence                  4578999999999864  445789999999999999999999999999998765 6999999999988      


Q ss_pred             CCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHH
Q 017812          213 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLK  292 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~  292 (365)
                                    .+.++...|++||+|+++|+++++.|++   +.||+||+|+||+|+|++.+..+... ........
T Consensus       169 --------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gI~vn~v~PG~v~T~~~~~~~~~~-~~~~~~~~  230 (270)
T 3ftp_A          169 --------------AGNPGQVNYAAAKAGVAGMTRALAREIG---SRGITVNCVAPGFIDTDMTKGLPQEQ-QTALKTQI  230 (270)
T ss_dssp             --------------HCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCSHHHHHSCHHH-HHHHHTTC
T ss_pred             --------------CCCCCchhHHHHHHHHHHHHHHHHHHHh---hhCeEEEEEEeCCCcCcchhhcCHHH-HHHHHhcC
Confidence                          7788899999999999999999999998   78999999999999999987654332 12222334


Q ss_pred             HhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017812          293 LLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  330 (365)
Q Consensus       293 ~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~  330 (365)
                      |++|+.+|+|+|+++++++... ...+|+.+.+|+|..+
T Consensus       231 p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~  269 (270)
T 3ftp_A          231 PLGRLGSPEDIAHAVAFLASPQAGYITGTTLHVNGGMFM  269 (270)
T ss_dssp             TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSSC
T ss_pred             CCCCCCCHHHHHHHHHHHhCCCcCCccCcEEEECCCccc
Confidence            6788999999999999554322 3568999999998754

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.6e-44  Score=327.25  Aligned_cols=245  Identities=25%  Similarity=0.321  Sum_probs=205.3

Q ss_pred             CCCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHH
Q 017812           53 PITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  132 (365)
Q Consensus        53 ~~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~  132 (365)
                      ++.++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++...  +.++.++++|++|+++++++++++
T Consensus        22 ~m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~   99 (283)
T 3v8b_A           22 SMMNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGA--GGQAIALEADVSDELQMRNAVRDL   99 (283)
T ss_dssp             -----CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTT--TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             hhcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHH
Confidence            445678999999999999999999999999999999999999999999988665  567899999999999999999999


Q ss_pred             HHHHhccCCCCCeeEEEecCCcc---cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccc
Q 017812          133 QQWLLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVF  209 (365)
Q Consensus       133 ~~~~~~~~~~~~id~lv~nAG~~---~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~  209 (365)
                      .+      .++++|+||||||+.   .+..+.+.++|++++++|+.|+++++++++|+|++++ .|+||++||.++... 
T Consensus       100 ~~------~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS~~~~~~-  171 (283)
T 3v8b_A          100 VL------KFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRG-GGAIVVVSSINGTRT-  171 (283)
T ss_dssp             HH------HHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTTB-
T ss_pred             HH------HhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CceEEEEcChhhccC-
Confidence            98      458899999999985   4556889999999999999999999999999998876 699999999988710 


Q ss_pred             cccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHH--
Q 017812          210 NAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMA--  287 (365)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~--  287 (365)
                                       .+.++..+|++||+|+++|+++++.|++   +.||+||+|+||+|+|++............  
T Consensus       172 -----------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~  231 (283)
T 3v8b_A          172 -----------------FTTPGATAYTATKAAQVAIVQQLALELG---KHHIRVNAVCPGAIETNISDNTKLRHEEETAI  231 (283)
T ss_dssp             -----------------CCSTTCHHHHHHHHHHHHHHHHHHHHTT---TTTEEEEEEEECSBSSCTTCCTTBCCHHHHSC
T ss_pred             -----------------CCCCCchHHHHHHHHHHHHHHHHHHHhC---ccCcEEEEEEeCCCcCCcccccccccchhhhh
Confidence                             2667889999999999999999999998   889999999999999999865421111100  


Q ss_pred             ----HHHHHHh--cCCCCHHHHHHHHHHHhcCCC---CCcccEEeCCCCcc
Q 017812          288 ----FTVLKLL--GLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRT  329 (365)
Q Consensus       288 ----~~~~~~~--~~~~~p~e~A~~i~~~~l~~~---~~~G~~~~~~~g~~  329 (365)
                          .....|+  +|+.+|+|+|++++  +|.++   ..+|+.+.+|+|..
T Consensus       232 ~~~~~~~~~p~~~~r~~~pedvA~~v~--fL~s~~a~~itG~~i~vdGG~~  280 (283)
T 3v8b_A          232 PVEWPKGQVPITDGQPGRSEDVAELIR--FLVSERARHVTGSPVWIDGGQG  280 (283)
T ss_dssp             CCBCTTCSCGGGTTCCBCHHHHHHHHH--HHTSGGGTTCCSCEEEESTTHH
T ss_pred             hhhhhhhcCccccCCCCCHHHHHHHHH--HHcCccccCCcCCEEEECcCcc
Confidence                0111244  78899999999999  44443   56899999999864

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=1.2e-43  Score=320.84  Aligned_cols=242  Identities=21%  Similarity=0.221  Sum_probs=209.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      .++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.  +.++.++++|++|+++++++++++.+ 
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~-   84 (264)
T 3ucx_A            8 LLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDT--GRRALSVGTDITDDAQVAHLVDETMK-   84 (264)
T ss_dssp             TTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             CcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHH-
Confidence            478999999999999999999999999999999999999999999998776  56889999999999999999999998 


Q ss_pred             HhccCCCCCeeEEEecCCcc---cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017812          136 LLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~---~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~  212 (365)
                           .++++|+||||||+.   .+..+.+.++|++++++|+.|+++++++++|+|.+++  |+||++||.++.      
T Consensus        85 -----~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--g~iv~isS~~~~------  151 (264)
T 3ucx_A           85 -----AYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK--GAVVNVNSMVVR------  151 (264)
T ss_dssp             -----HTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT--CEEEEECCGGGG------
T ss_pred             -----HcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--CEEEEECcchhc------
Confidence                 568999999999985   3455789999999999999999999999999998764  899999999988      


Q ss_pred             CCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH----------
Q 017812          213 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF----------  282 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~----------  282 (365)
                                    .+.++...|++||+|+++|+++++.|++   +.||+||+|+||+|+|++.+.....          
T Consensus       152 --------------~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~  214 (264)
T 3ucx_A          152 --------------HSQAKYGAYKMAKSALLAMSQTLATELG---EKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVE  214 (264)
T ss_dssp             --------------CCCTTCHHHHHHHHHHHHHHHHHHHHHH---TTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHH
T ss_pred             --------------cCCCccHHHHHHHHHHHHHHHHHHHHhC---ccCeEEEEEecCccccccHHHHHHhhhhhcCCCHH
Confidence                          7888899999999999999999999998   8899999999999999987654221          


Q ss_pred             HHHHHHHHHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017812          283 LSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  330 (365)
Q Consensus       283 ~~~~~~~~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~  330 (365)
                      ..........|++|+.+|+|+|+++++++... ...+|+.+.+|+|+..
T Consensus       215 ~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~~  263 (264)
T 3ucx_A          215 DIYNAAAAGSDLKRLPTEDEVASAILFMASDLASGITGQALDVNCGEYK  263 (264)
T ss_dssp             HHHHHHHTTSSSSSCCBHHHHHHHHHHHHSGGGTTCCSCEEEESTTSSC
T ss_pred             HHHHHHhccCCcccCCCHHHHHHHHHHHcCccccCCCCCEEEECCCccC
Confidence            11111222346778999999999999544322 3568999999999754

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.6e-43  Score=321.13  Aligned_cols=246  Identities=26%  Similarity=0.356  Sum_probs=190.9

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEec-CchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHH
Q 017812           54 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGR-SSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  132 (365)
Q Consensus        54 ~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~  132 (365)
                      +.++++|++|||||++|||+++|++|+++|++|++++| +.++++++.+++...  +.++.++++|++|+++++++++++
T Consensus        24 m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~  101 (280)
T 4da9_A           24 MTQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGL--GARVIFLRADLADLSSHQATVDAV  101 (280)
T ss_dssp             CSCCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHT--TCCEEEEECCTTSGGGHHHHHHHH
T ss_pred             hhccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHH
Confidence            45678999999999999999999999999999999995 778888888888765  567999999999999999999999


Q ss_pred             HHHHhccCCCCCeeEEEecCCcc----cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCC--CCCeEEEEcCCccc
Q 017812          133 QQWLLDSDMHSSIQLLINNAGIL----ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP--VPSRIVNVTSFTHR  206 (365)
Q Consensus       133 ~~~~~~~~~~~~id~lv~nAG~~----~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~--~~g~iV~vsS~~~~  206 (365)
                      .+      .++++|+||||||+.    .+..+.+.++|++++++|+.|+++++++++|.|++++  ..|+||++||.++.
T Consensus       102 ~~------~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~  175 (280)
T 4da9_A          102 VA------EFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAV  175 (280)
T ss_dssp             HH------HHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC---
T ss_pred             HH------HcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhc
Confidence            98      457899999999983    3455789999999999999999999999999997643  25799999999988


Q ss_pred             ccccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHH
Q 017812          207 NVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLM  286 (365)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~  286 (365)
                                          .+.++...|++||+|+++|+++++.|++   +.||+||+|+||+|+|++.+.........
T Consensus       176 --------------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gI~vn~v~PG~v~T~~~~~~~~~~~~~  232 (280)
T 4da9_A          176 --------------------MTSPERLDYCMSKAGLAAFSQGLALRLA---ETGIAVFEVRPGIIRSDMTAAVSGKYDGL  232 (280)
T ss_dssp             ------------------------CCHHHHHHHHHHHHHHHHHHHHHT---TTTEEEEEEEECCBCC-------------
T ss_pred             --------------------cCCCCccHHHHHHHHHHHHHHHHHHHHH---HhCcEEEEEeecCCcCCchhhcchhHHHH
Confidence                                7788889999999999999999999998   88999999999999999987654322222


Q ss_pred             HHHHHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017812          287 AFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  330 (365)
Q Consensus       287 ~~~~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~  330 (365)
                      ......|++|+.+|+|+|+++++++... ...+|+.+.+|+|..+
T Consensus       233 ~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~  277 (280)
T 4da9_A          233 IESGLVPMRRWGEPEDIGNIVAGLAGGQFGFATGSVIQADGGLSI  277 (280)
T ss_dssp             ---------CCBCHHHHHHHHHHHHTSTTGGGTTCEEEESTTCC-
T ss_pred             HhhcCCCcCCcCCHHHHHHHHHHHhCccccCCCCCEEEECCCccc
Confidence            2222467889999999999999544322 2468999999998764

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=100.00  E-value=8.7e-44  Score=323.90  Aligned_cols=249  Identities=19%  Similarity=0.187  Sum_probs=211.7

Q ss_pred             CCCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHH
Q 017812           53 PITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  132 (365)
Q Consensus        53 ~~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~  132 (365)
                      +...++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.... +.++.++++|++|+++++++++++
T Consensus        21 ~~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~   99 (277)
T 4fc7_A           21 CPDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGAT-GRRCLPLSMDVRAPPAVMAAVDQA   99 (277)
T ss_dssp             CTTTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHH-SSCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCcEEEEEcCCCCHHHHHHHHHHH
Confidence            3446899999999999999999999999999999999999999998888886654 457999999999999999999999


Q ss_pred             HHHHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc
Q 017812          133 QQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN  210 (365)
Q Consensus       133 ~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~  210 (365)
                      .+      .++++|+||||||+..  +..+.+.++|++++++|+.|+++++++++|.|.+++ .|+||++||.++.    
T Consensus       100 ~~------~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~----  168 (277)
T 4fc7_A          100 LK------EFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDH-GGVIVNITATLGN----  168 (277)
T ss_dssp             HH------HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-CEEEEEECCSHHH----
T ss_pred             HH------HcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhC----
Confidence            88      4578999999999763  455789999999999999999999999999997765 6899999999988    


Q ss_pred             ccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc-h-hHHHHHHH
Q 017812          211 AQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV-P-SFLSLMAF  288 (365)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~-~-~~~~~~~~  288 (365)
                                      .+.++...|++||+|+++|+++++.|++   +.||+||+|+||+|.|++.... . ........
T Consensus       169 ----------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~  229 (277)
T 4fc7_A          169 ----------------RGQALQVHAGSAKAAVDAMTRHLAVEWG---PQNIRVNSLAPGPISGTEGLRRLGGPQASLSTK  229 (277)
T ss_dssp             ----------------HTCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHH
T ss_pred             ----------------CCCCCcHHHHHHHHHHHHHHHHHHHHhh---hcCeEEEEEEECCEecchhhhhccCCHHHHHHH
Confidence                            7788889999999999999999999998   7899999999999999864321 1 11112223


Q ss_pred             HHHHHhcCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCccccC
Q 017812          289 TVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTVNS  332 (365)
Q Consensus       289 ~~~~~~~~~~~p~e~A~~i~~~~l~-~~~~~G~~~~~~~g~~~~~  332 (365)
                      ....|++|+.+|+|+|+++++++.. +...+|+.+.+|+|..+..
T Consensus       230 ~~~~p~~r~~~p~dvA~~v~fL~s~~~~~itG~~i~vdGG~~~~~  274 (277)
T 4fc7_A          230 VTASPLQRLGNKTEIAHSVLYLASPLASYVTGAVLVADGGAWLTF  274 (277)
T ss_dssp             HHTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTHHHHC
T ss_pred             hccCCCCCCcCHHHHHHHHHHHcCCccCCcCCCEEEECCCcccCC
Confidence            3445788999999999999954432 1356899999999987643

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=100.00  E-value=3.9e-43  Score=320.28  Aligned_cols=246  Identities=16%  Similarity=0.216  Sum_probs=212.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcC-CCceEEEEecCCChhhHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNK-DARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.+. +.++.++++|++|+++++++++++.+
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   87 (281)
T 3svt_A            8 SFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTA   87 (281)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999999999999999987643 23789999999999999999999988


Q ss_pred             HHhccCCCCCeeEEEecCCcc---cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017812          135 WLLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  211 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~---~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~  211 (365)
                            .++++|+||||||+.   .+..+.+.++|++++++|+.|+++++++++|+|.+++ .|+||++||.++.     
T Consensus        88 ------~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~-----  155 (281)
T 3svt_A           88 ------WHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGG-GGSFVGISSIAAS-----  155 (281)
T ss_dssp             ------HHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CEEEEEECCHHHH-----
T ss_pred             ------HcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEeCHHHc-----
Confidence                  458899999999984   3456789999999999999999999999999998876 7999999999988     


Q ss_pred             cCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH-HHHHHHHH
Q 017812          212 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF-LSLMAFTV  290 (365)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~  290 (365)
                                     .+.++..+|++||+|+++|+++++.|++   ++||+||+|+||+|+|++.+..... ........
T Consensus       156 ---------------~~~~~~~~Y~asK~a~~~l~~~la~e~~---~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~  217 (281)
T 3svt_A          156 ---------------NTHRWFGAYGVTKSAVDHLMQLAADELG---ASWVRVNSIRPGLIRTDLVAAITESAELSSDYAM  217 (281)
T ss_dssp             ---------------SCCTTCTHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHH
T ss_pred             ---------------CCCCCChhHHHHHHHHHHHHHHHHHHhh---hcCeEEEEEEeCcCcCcchhhcccCHHHHHHHHh
Confidence                           7788889999999999999999999998   8899999999999999998654221 11222334


Q ss_pred             HHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcccc
Q 017812          291 LKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVN  331 (365)
Q Consensus       291 ~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~~  331 (365)
                      ..|++|+.+|+|+|+++++++... ...+|+.+..|+|....
T Consensus       218 ~~p~~r~~~~~dva~~~~~l~s~~~~~itG~~~~vdgG~~~~  259 (281)
T 3svt_A          218 CTPLPRQGEVEDVANMAMFLLSDAASFVTGQVINVDGGQMLR  259 (281)
T ss_dssp             HCSSSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGS
T ss_pred             cCCCCCCCCHHHHHHHHHHHhCcccCCCCCCEEEeCCChhcc
Confidence            457789999999999999544322 24589999999998875

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=100.00  E-value=3.9e-43  Score=323.03  Aligned_cols=244  Identities=21%  Similarity=0.260  Sum_probs=205.9

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecC------------chhHHHHHHHHHhhcCCCceEEEEecCCCh
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRS------------SHLLSETMADITSRNKDARLEAFQVDLSSF  122 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~------------~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~  122 (365)
                      .+++||++|||||++|||+++|++|+++|++|++++|+            .++++++.+++...  +.++.++++|++|+
T Consensus        24 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~  101 (299)
T 3t7c_A           24 GKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEAL--GRRIIASQVDVRDF  101 (299)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHT--TCCEEEEECCTTCH
T ss_pred             cccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhc--CCceEEEECCCCCH
Confidence            46889999999999999999999999999999999987            67788888887765  56899999999999


Q ss_pred             hhHHHHHHHHHHHHhccCCCCCeeEEEecCCcccC---CCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEE
Q 017812          123 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILAT---SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVN  199 (365)
Q Consensus       123 ~~v~~~~~~~~~~~~~~~~~~~id~lv~nAG~~~~---~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~  199 (365)
                      ++++++++++.+      .++++|+||||||+...   ..+.+.++|++++++|+.|+++++++++|.|.+++..|+||+
T Consensus       102 ~~v~~~~~~~~~------~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~  175 (299)
T 3t7c_A          102 DAMQAAVDDGVT------QLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVF  175 (299)
T ss_dssp             HHHHHHHHHHHH------HHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEE
T ss_pred             HHHHHHHHHHHH------HhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEE
Confidence            999999999988      45789999999998643   557799999999999999999999999999887654689999


Q ss_pred             EcCCcccccccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc
Q 017812          200 VTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV  279 (365)
Q Consensus       200 vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~  279 (365)
                      +||.++.                    .+.++...|++||+|+++|+++++.|++   +.||+||+|+||+|+|++....
T Consensus       176 isS~~~~--------------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gI~vn~v~PG~v~T~~~~~~  232 (299)
T 3t7c_A          176 TSSIGGL--------------------RGAENIGNYIASKHGLHGLMRTMALELG---PRNIRVNIVCPSSVATPMLLNE  232 (299)
T ss_dssp             ECCGGGT--------------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEESCBSSTTTSSH
T ss_pred             ECChhhc--------------------cCCCCcchHHHHHHHHHHHHHHHHHHhc---ccCcEEEEEecCCccCcccccc
Confidence            9999998                    7888999999999999999999999998   7899999999999999997643


Q ss_pred             hhHH-----------HHH----HHHHHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017812          280 PSFL-----------SLM----AFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  330 (365)
Q Consensus       280 ~~~~-----------~~~----~~~~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~  330 (365)
                      +...           ...    ......| +++.+|+|+|+++++++... ...+|+.+.+|+|..+
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~l  298 (299)
T 3t7c_A          233 PTYRMFRPDLENPTVEDFQVASRQMHVLP-IPYVEPADISNAILFLVSDDARYITGVSLPVDGGALL  298 (299)
T ss_dssp             HHHHHHCTTSSSCCHHHHHHHHHHHSSSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             chhhhhhhhhccchhhHHHHHhhhhcccC-cCCCCHHHHHHHHHHHhCcccccCcCCEEeeCCCccc
Confidence            2110           000    0111112 57789999999999544322 2568999999999764

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=100.00  E-value=2.5e-43  Score=319.89  Aligned_cols=238  Identities=23%  Similarity=0.275  Sum_probs=205.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++     +.++.++++|++|.++++++++++.+ 
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~-   81 (271)
T 3tzq_B            8 ELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV-----GRGAVHHVVDLTNEVSVRALIDFTID-   81 (271)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH-----CTTCEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-----CCCeEEEECCCCCHHHHHHHHHHHHH-
Confidence            578999999999999999999999999999999999999998888777     45788999999999999999999988 


Q ss_pred             HhccCCCCCeeEEEecCCcccC----CCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017812          136 LLDSDMHSSIQLLINNAGILAT----SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  211 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~~----~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~  211 (365)
                           .++++|+||||||+..+    ..+.+.++|++++++|+.|+++++++++|+|++++ .|+||++||.++.     
T Consensus        82 -----~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~-----  150 (271)
T 3tzq_B           82 -----TFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAG-GGAIVNISSATAH-----  150 (271)
T ss_dssp             -----HHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGT-----
T ss_pred             -----HcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEECCHHHc-----
Confidence                 45789999999998633    34779999999999999999999999999998876 7999999999988     


Q ss_pred             cCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHH
Q 017812          212 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVL  291 (365)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~  291 (365)
                                     .+.++...|++||+|+++|+++++.|++   +.||+||+|+||+|+|++.+..............
T Consensus       151 ---------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~  212 (271)
T 3tzq_B          151 ---------------AAYDMSTAYACTKAAIETLTRYVATQYG---RHGVRCNAIAPGLVRTPRLEVGLPQPIVDIFATH  212 (271)
T ss_dssp             ---------------SBCSSCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECCBCCTTTC---CHHHHHHHHTT
T ss_pred             ---------------CCCCCChHHHHHHHHHHHHHHHHHHHHh---hcCEEEEEEEeCCCcCccccccCCHHHHHHHHhc
Confidence                           7788899999999999999999999998   7899999999999999998732221112222333


Q ss_pred             HHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCc
Q 017812          292 KLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  328 (365)
Q Consensus       292 ~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~  328 (365)
                      .+++|+.+|+|+|+.+++++... ...+|+.+.+|+|.
T Consensus       213 ~~~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  250 (271)
T 3tzq_B          213 HLAGRIGEPHEIAELVCFLASDRAAFITGQVIAADSGL  250 (271)
T ss_dssp             STTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             CCCCCCcCHHHHHHHHHHHhCcccCCcCCCEEEECCCc
Confidence            46788999999999999554332 35689999999993

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=100.00  E-value=1.1e-43  Score=321.28  Aligned_cols=241  Identities=24%  Similarity=0.298  Sum_probs=201.3

Q ss_pred             CCCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHH
Q 017812           53 PITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  132 (365)
Q Consensus        53 ~~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~  132 (365)
                      ++.+++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++     +.++.++++|++|+++++++++++
T Consensus        21 ~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~   95 (266)
T 3grp_A           21 SMFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL-----GKDVFVFSANLSDRKSIKQLAEVA   95 (266)
T ss_dssp             CTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CSSEEEEECCTTSHHHHHHHHHHH
T ss_pred             chhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceEEEEeecCCHHHHHHHHHHH
Confidence            456789999999999999999999999999999999999999888877665     567899999999999999999999


Q ss_pred             HHHHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc
Q 017812          133 QQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN  210 (365)
Q Consensus       133 ~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~  210 (365)
                      .+      .++++|+||||||+..  +..+.+.++|++++++|+.|+++++++++|.|++++ .|+||++||.++.    
T Consensus        96 ~~------~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~Iv~isS~~~~----  164 (266)
T 3grp_A           96 ER------EMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRR-YGRIINITSIVGV----  164 (266)
T ss_dssp             HH------HHTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCC-------
T ss_pred             HH------HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CcEEEEECCHHHc----
Confidence            88      4578999999999864  345778999999999999999999999999998765 6899999999988    


Q ss_pred             ccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHH
Q 017812          211 AQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTV  290 (365)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~  290 (365)
                                      .+.++...|++||+|+++|+++++.|++   +.||+||+|+||+|+|++.+...... ......
T Consensus       165 ----------------~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gI~vn~v~PG~v~t~~~~~~~~~~-~~~~~~  224 (266)
T 3grp_A          165 ----------------VGNPGQTNYCAAKAGLIGFSKALAQEIA---SRNITVNCIAPGFIKSAMTDKLNEKQ-KEAIMA  224 (266)
T ss_dssp             --------------------CHHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCSHHHHTCCHHH-HHHHHT
T ss_pred             ----------------CCCCCchhHHHHHHHHHHHHHHHHHHhh---hhCcEEEEEeeCcCCCchhhccCHHH-HHHHHh
Confidence                            7788899999999999999999999998   78999999999999999987654322 122233


Q ss_pred             HHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017812          291 LKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  329 (365)
Q Consensus       291 ~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~  329 (365)
                      ..|++|+.+|+|+|+++++++... ...+|+.+.+|+|..
T Consensus       225 ~~p~~r~~~~edvA~~v~~L~s~~~~~itG~~i~vdGG~~  264 (266)
T 3grp_A          225 MIPMKRMGIGEEIAFATVYLASDEAAYLTGQTLHINGGMA  264 (266)
T ss_dssp             TCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC-
T ss_pred             cCCCCCCcCHHHHHHHHHHHhCccccCccCCEEEECCCee
Confidence            457789999999999999544322 256899999998864

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=100.00  E-value=3.1e-43  Score=320.13  Aligned_cols=242  Identities=21%  Similarity=0.316  Sum_probs=207.0

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++     +.++.++++|++|+++++++++++.+
T Consensus        23 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~~~   97 (277)
T 4dqx_A           23 MDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI-----GSKAFGVRVDVSSAKDAESMVEKTTA   97 (277)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceEEEEecCCCHHHHHHHHHHHHH
Confidence            3588999999999999999999999999999999999999888877775     55789999999999999999999988


Q ss_pred             HHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017812          135 WLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~  212 (365)
                            .++++|+||||||+..  +..+.+.++|++++++|+.|+++++++++|.|++++ .|+||++||.++.      
T Consensus        98 ------~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~------  164 (277)
T 4dqx_A           98 ------KWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNG-GGSIINTTSYTAT------  164 (277)
T ss_dssp             ------HHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTT-CEEEEEECCGGGT------
T ss_pred             ------HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhC------
Confidence                  4578999999999863  455789999999999999999999999999998876 7899999999988      


Q ss_pred             CCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccch----hH-HHHHH
Q 017812          213 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP----SF-LSLMA  287 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~----~~-~~~~~  287 (365)
                                    .+.++...|++||+|+++|+++++.|++   +.||+||+|+||+|+|++.....    .. .....
T Consensus       165 --------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~  227 (277)
T 4dqx_A          165 --------------SAIADRTAYVASKGAISSLTRAMAMDHA---KEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSD  227 (277)
T ss_dssp             --------------SCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHH
T ss_pred             --------------cCCCCChhHHHHHHHHHHHHHHHHHHhh---hcCeEEEEEeeCcCcCchhhhhcccccchhHHHHH
Confidence                          7888899999999999999999999998   78999999999999999843211    11 11111


Q ss_pred             HHHHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcccc
Q 017812          288 FTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVN  331 (365)
Q Consensus       288 ~~~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~~  331 (365)
                      .....|++|+.+|+|+|+++++++... ...+|+.+.+|+|..+.
T Consensus       228 ~~~~~~~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~  272 (277)
T 4dqx_A          228 FNARAVMDRMGTAEEIAEAMLFLASDRSRFATGSILTVDGGSSIG  272 (277)
T ss_dssp             HHTTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSSSC
T ss_pred             HHhcCcccCCcCHHHHHHHHHHHhCCccCCCcCCEEEECCchhhh
Confidence            223346788999999999999554322 24689999999997763

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=100.00  E-value=1.2e-43  Score=323.17  Aligned_cols=240  Identities=23%  Similarity=0.245  Sum_probs=205.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      .+++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++...  +.++.++++|++|.++++++++++.+ 
T Consensus        21 m~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~-   97 (279)
T 3sju_A           21 MSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAA--GHDVDGSSCDVTSTDEVHAAVAAAVE-   97 (279)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHH-
Confidence            467999999999999999999999999999999999999999999998765  56789999999999999999999988 


Q ss_pred             HhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhH--hhhcCCCCCeEEEEcCCcccccccc
Q 017812          136 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLP--LLKNSPVPSRIVNVTSFTHRNVFNA  211 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~--~~~~~~~~g~iV~vsS~~~~~~~~~  211 (365)
                           .++++|+||||||+..  +..+.+.++|++++++|+.|+++++++++|  .|++++ .|+||++||.++.     
T Consensus        98 -----~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~-~g~iV~isS~~~~-----  166 (279)
T 3sju_A           98 -----RFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAG-WGRIVNIASTGGK-----  166 (279)
T ss_dssp             -----HHCSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHT-CEEEEEECCGGGT-----
T ss_pred             -----HcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcC-CcEEEEECChhhc-----
Confidence                 4588999999999874  445789999999999999999999999999  577655 6899999999988     


Q ss_pred             cCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccch----------h
Q 017812          212 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP----------S  281 (365)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~----------~  281 (365)
                                     .+.++...|++||+|+++|+++++.|++   +.||+||+|+||+|+|++.+...          .
T Consensus       167 ---------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~  228 (279)
T 3sju_A          167 ---------------QGVMYAAPYTASKHGVVGFTKSVGFELA---KTGITVNAVCPGYVETPMAERVREGYARHWGVTE  228 (279)
T ss_dssp             ---------------SCCTTCHHHHHHHHHHHHHHHHHHHHTG---GGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCH
T ss_pred             ---------------cCCCCChhHHHHHHHHHHHHHHHHHHHH---hhCcEEEEEeeCcccchHHHHHHhhhhhcccCCh
Confidence                           7888899999999999999999999998   78999999999999999876431          1


Q ss_pred             HHHHHHHHHHHHhcCCCCHHHHHHHHHHHhcCCC---CCcccEEeCCCCcc
Q 017812          282 FLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRT  329 (365)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~p~e~A~~i~~~~l~~~---~~~G~~~~~~~g~~  329 (365)
                      ...........|++|+.+|+|+|++++  +|.++   ..+|+.+.+|+|..
T Consensus       229 ~~~~~~~~~~~p~~r~~~pedvA~~v~--~L~s~~a~~itG~~i~vdGG~~  277 (279)
T 3sju_A          229 QEVHERFNAKIPLGRYSTPEEVAGLVG--YLVTDAAASITAQALNVCGGLG  277 (279)
T ss_dssp             HHHHHHHHTTCTTSSCBCHHHHHHHHH--HHTSSGGGGCCSCEEEESTTCC
T ss_pred             HHHHHHHHhcCCCCCCCCHHHHHHHHH--HHhCccccCcCCcEEEECCCcc
Confidence            111222233357788999999999999  55554   46899999999864

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=100.00  E-value=7.4e-44  Score=320.90  Aligned_cols=246  Identities=20%  Similarity=0.266  Sum_probs=206.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      +++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.  +.++.++++|++|+++++++++++.+ 
T Consensus         3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~-   79 (257)
T 3imf_A            3 AMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQF--PGQILTVQMDVRNTDDIQKMIEQIDE-   79 (257)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCS--TTCEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHH-
Confidence            478999999999999999999999999999999999999999998888654  45789999999999999999999988 


Q ss_pred             HhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                           .++++|+||||||+..  +..+.+.++|++++++|+.|+++++++++|+|.+++..|+||++||..+.       
T Consensus        80 -----~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-------  147 (257)
T 3imf_A           80 -----KFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAW-------  147 (257)
T ss_dssp             -----HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGG-------
T ss_pred             -----HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhc-------
Confidence                 4578999999999863  45678999999999999999999999999999554436999999999988       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHH--HHHHHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFL--SLMAFTVL  291 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~--~~~~~~~~  291 (365)
                                   .+.++...|++||+|+++|+++++.|++  .+.||+||+|+||+|+|++........  ........
T Consensus       148 -------------~~~~~~~~Y~asKaa~~~l~~~la~e~~--~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~  212 (257)
T 3imf_A          148 -------------DAGPGVIHSAAAKAGVLAMTKTLAVEWG--RKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQS  212 (257)
T ss_dssp             -------------SCCTTCHHHHHHHHHHHHHHHHHHHHHH--HHHCCEEEEEEECCBSSCCCC-------CCSHHHHTT
T ss_pred             -------------cCCCCcHHHHHHHHHHHHHHHHHHHHhc--cccCeEEEEEEECCCcCCcchhhcccCHHHHHHHHhc
Confidence                         7788899999999999999999999984  135999999999999999765321100  01112233


Q ss_pred             HHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcccc
Q 017812          292 KLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVN  331 (365)
Q Consensus       292 ~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~~  331 (365)
                      .|++|+.+|+|+|+++++++... ...+|+.+.+|+|..+.
T Consensus       213 ~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~  253 (257)
T 3imf_A          213 VPLGRLGTPEEIAGLAYYLCSDEAAYINGTCMTMDGGQHLH  253 (257)
T ss_dssp             STTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTSC
T ss_pred             CCCCCCcCHHHHHHHHHHHcCchhcCccCCEEEECCCcccC
Confidence            46788999999999999554322 24689999999998763

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=100.00  E-value=1e-43  Score=321.95  Aligned_cols=240  Identities=22%  Similarity=0.292  Sum_probs=208.2

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEec-CchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHH
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGR-SSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  133 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~  133 (365)
                      .++++|++|||||++|||+++|++|+++|++|++++| +.+.++++.+++...  +.++.++++|++|+++++++++++.
T Consensus        24 ~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~v~~~~~~~~  101 (269)
T 4dmm_A           24 LPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAA--GGEAFAVKADVSQESEVEALFAAVI  101 (269)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999998 667788888887765  4578999999999999999999998


Q ss_pred             HHHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017812          134 QWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  211 (365)
Q Consensus       134 ~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~  211 (365)
                      +      .++++|+||||||+..  +..+.+.++|++++++|+.|+++++++++|+|++++ .|+||++||.++.     
T Consensus       102 ~------~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~-----  169 (269)
T 4dmm_A          102 E------RWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQR-SGRIINIASVVGE-----  169 (269)
T ss_dssp             H------HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCHHHH-----
T ss_pred             H------HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhc-----
Confidence            8      4578999999999874  345789999999999999999999999999998765 6999999999988     


Q ss_pred             cCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHH
Q 017812          212 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVL  291 (365)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~  291 (365)
                                     .+.++...|++||+|+++|+++++.|++   +.||+||+|+||+|+|++.+....    ......
T Consensus       170 ---------------~~~~~~~~Y~asK~a~~~l~~~la~e~~---~~gi~vn~v~PG~v~T~~~~~~~~----~~~~~~  227 (269)
T 4dmm_A          170 ---------------MGNPGQANYSAAKAGVIGLTKTVAKELA---SRGITVNAVAPGFIATDMTSELAA----EKLLEV  227 (269)
T ss_dssp             ---------------HCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEECCBTTSCSCHHHH----HHHGGG
T ss_pred             ---------------CCCCCchhHHHHHHHHHHHHHHHHHHHh---hhCcEEEEEEECCCcCcccccccH----HHHHhc
Confidence                           7778899999999999999999999998   789999999999999999865432    122233


Q ss_pred             HHhcCCCCHHHHHHHHHHHhcCC--CCCcccEEeCCCCccc
Q 017812          292 KLLGLLQSPEKGINSVLDAALAP--PETSGVYFFGGKGRTV  330 (365)
Q Consensus       292 ~~~~~~~~p~e~A~~i~~~~l~~--~~~~G~~~~~~~g~~~  330 (365)
                      .|++|+.+|+|+|+++++++..+  ...+|+.+.+|+|..+
T Consensus       228 ~p~~r~~~~~dvA~~v~~l~s~~~~~~itG~~i~vdGG~~~  268 (269)
T 4dmm_A          228 IPLGRYGEAAEVAGVVRFLAADPAAAYITGQVINIDGGLVM  268 (269)
T ss_dssp             CTTSSCBCHHHHHHHHHHHHHCGGGGGCCSCEEEESTTSCC
T ss_pred             CCCCCCCCHHHHHHHHHHHhCCcccCCCcCCEEEECCCeec
Confidence            57789999999999999655432  2567999999998754

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=100.00  E-value=3.8e-44  Score=323.63  Aligned_cols=246  Identities=18%  Similarity=0.190  Sum_probs=199.3

Q ss_pred             CCCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecC---chhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHH
Q 017812           53 PITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRS---SHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFK  129 (365)
Q Consensus        53 ~~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~---~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~  129 (365)
                      .+.+++||++|||||++|||+++|++|+++|++|++++|+   .++++++.+++...  +.++.++++|++|++++++++
T Consensus         5 ~~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~   82 (262)
T 3ksu_A            5 KYHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQ--GAKVALYQSDLSNEEEVAKLF   82 (262)
T ss_dssp             CCSCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTT--TCEEEEEECCCCSHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHH
Confidence            3456899999999999999999999999999999998765   45677777777665  568999999999999999999


Q ss_pred             HHHHHHHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccc
Q 017812          130 DSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRN  207 (365)
Q Consensus       130 ~~~~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~  207 (365)
                      +++.+      .++++|+||||||+..  +..+.+.++|++++++|+.|+++++++++|+|++   .|+||++||.++. 
T Consensus        83 ~~~~~------~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~---~g~iv~isS~~~~-  152 (262)
T 3ksu_A           83 DFAEK------EFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNP---NGHIITIATSLLA-  152 (262)
T ss_dssp             HHHHH------HHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEE---EEEEEEECCCHHH-
T ss_pred             HHHHH------HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcC---CCEEEEEechhhc-
Confidence            99998      4588999999999874  3457899999999999999999999999999943   4899999999887 


Q ss_pred             cccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHH
Q 017812          208 VFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMA  287 (365)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~  287 (365)
                                         .+.++...|++||+|+++|+++++.|++   +.||+||+|+||+|+|++............
T Consensus       153 -------------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~  210 (262)
T 3ksu_A          153 -------------------AYTGFYSTYAGNKAPVEHYTRAASKELM---KQQISVNAIAPGPMDTSFFYGQETKESTAF  210 (262)
T ss_dssp             -------------------HHHCCCCC-----CHHHHHHHHHHHHTT---TTTCEEEEEEECCCCTHHHHTCC-------
T ss_pred             -------------------cCCCCCchhHHHHHHHHHHHHHHHHHHH---HcCcEEEEEeeCCCcCccccccCchHHHHH
Confidence                               5666778999999999999999999998   889999999999999999765433222222


Q ss_pred             HHHHHHhcCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccccC
Q 017812          288 FTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNS  332 (365)
Q Consensus       288 ~~~~~~~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~~~  332 (365)
                      .....|++++.+|+|+|+++++++..+...+|+.+.+|+|.....
T Consensus       211 ~~~~~~~~r~~~pedvA~~v~~L~s~~~~itG~~i~vdGg~~~~~  255 (262)
T 3ksu_A          211 HKSQAMGNQLTKIEDIAPIIKFLTTDGWWINGQTIFANGGYTTRE  255 (262)
T ss_dssp             -----CCCCSCCGGGTHHHHHHHHTTTTTCCSCEEEESTTCCCC-
T ss_pred             HHhcCcccCCCCHHHHHHHHHHHcCCCCCccCCEEEECCCccCCC
Confidence            334457788999999999999766543467899999999977643

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=100.00  E-value=5.9e-43  Score=319.11  Aligned_cols=247  Identities=21%  Similarity=0.261  Sum_probs=204.7

Q ss_pred             CCCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecC------------chhHHHHHHHHHhhcCCCceEEEEecCC
Q 017812           53 PITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRS------------SHLLSETMADITSRNKDARLEAFQVDLS  120 (365)
Q Consensus        53 ~~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~------------~~~~~~~~~~l~~~~~~~~~~~~~~Dls  120 (365)
                      ++.+++||++|||||++|||+++|++|+++|++|++++|+            .+.+++..+++...  +.++.++++|++
T Consensus         4 ~m~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~   81 (281)
T 3s55_A            4 SMADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKT--GRRCISAKVDVK   81 (281)
T ss_dssp             --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHT--TCCEEEEECCTT
T ss_pred             cccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhc--CCeEEEEeCCCC
Confidence            3557899999999999999999999999999999999997            55667777776655  467899999999


Q ss_pred             ChhhHHHHHHHHHHHHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEE
Q 017812          121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIV  198 (365)
Q Consensus       121 ~~~~v~~~~~~~~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV  198 (365)
                      |+++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.|+++++++++|+|++++ .|+||
T Consensus        82 ~~~~v~~~~~~~~~------~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv  154 (281)
T 3s55_A           82 DRAALESFVAEAED------TLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRN-YGRIV  154 (281)
T ss_dssp             CHHHHHHHHHHHHH------HHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEE
T ss_pred             CHHHHHHHHHHHHH------hcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEE
Confidence            99999999999988      4578999999999863  456789999999999999999999999999998776 69999


Q ss_pred             EEcCCcccccccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcccc
Q 017812          199 NVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE  278 (365)
Q Consensus       199 ~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~  278 (365)
                      ++||.++.                    .+.++...|++||+|+++|+++++.|++   +.||+||+|+||+|+|++.+.
T Consensus       155 ~isS~~~~--------------------~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~vn~v~PG~v~t~~~~~  211 (281)
T 3s55_A          155 TVSSMLGH--------------------SANFAQASYVSSKWGVIGLTKCAAHDLV---GYGITVNAVAPGNIETPMTHN  211 (281)
T ss_dssp             EECCGGGG--------------------SCCTTCHHHHHHHHHHHHHHHHHHHHTG---GGTEEEEEEEECSBCSTTTSS
T ss_pred             EECChhhc--------------------CCCCCCchhHHHHHHHHHHHHHHHHHHh---hcCcEEEEEecCcccCccccc
Confidence            99999988                    7788899999999999999999999998   789999999999999999764


Q ss_pred             chh------------HHHHHHHH-HH-HHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcccc
Q 017812          279 VPS------------FLSLMAFT-VL-KLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVN  331 (365)
Q Consensus       279 ~~~------------~~~~~~~~-~~-~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~~  331 (365)
                      ...            ........ .. ...+++.+|+|+|+++++++... ...+|+.+.+|+|....
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~~  279 (281)
T 3s55_A          212 DFVFGTMRPDLEKPTLKDVESVFASLHLQYAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDAGATAR  279 (281)
T ss_dssp             HHHHHC-------CCHHHHHHHHHHHCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred             hhhhccccccccccchhHHHHHHHhhhccCcCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCcccC
Confidence            210            00000000 00 11157889999999999544322 25689999999998753

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=100.00  E-value=2.6e-43  Score=322.26  Aligned_cols=244  Identities=22%  Similarity=0.251  Sum_probs=204.8

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecC----------------chhHHHHHHHHHhhcCCCceEEEEec
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRS----------------SHLLSETMADITSRNKDARLEAFQVD  118 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~----------------~~~~~~~~~~l~~~~~~~~~~~~~~D  118 (365)
                      .+++||++|||||++|||+++|++|+++|++|++++|+                .++++++.+++...  +.++.++++|
T Consensus         7 ~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D   84 (286)
T 3uve_A            7 GRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGH--NRRIVTAEVD   84 (286)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTT--TCCEEEEECC
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhc--CCceEEEEcC
Confidence            35789999999999999999999999999999999987                67777777777655  5689999999


Q ss_pred             CCChhhHHHHHHHHHHHHhccCCCCCeeEEEecCCcccC---CCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCC
Q 017812          119 LSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILAT---SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPS  195 (365)
Q Consensus       119 ls~~~~v~~~~~~~~~~~~~~~~~~~id~lv~nAG~~~~---~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g  195 (365)
                      ++|+++++++++++.+      .++++|+||||||+...   ..+.+.++|++++++|+.|+++++++++|+|.+++..|
T Consensus        85 v~~~~~v~~~~~~~~~------~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g  158 (286)
T 3uve_A           85 VRDYDALKAAVDSGVE------QLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGG  158 (286)
T ss_dssp             TTCHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCE
T ss_pred             CCCHHHHHHHHHHHHH------HhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCc
Confidence            9999999999999998      45789999999998643   45779999999999999999999999999998765468


Q ss_pred             eEEEEcCCcccccccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCc
Q 017812          196 RIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNI  275 (365)
Q Consensus       196 ~iV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~  275 (365)
                      +||++||.++.                    .+.++...|++||+|+++|+++|+.|++   +.||+||+|+||+|+|++
T Consensus       159 ~iv~isS~~~~--------------------~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gI~vn~v~PG~v~T~~  215 (286)
T 3uve_A          159 SIILTSSVGGL--------------------KAYPHTGHYVAAKHGVVGLMRAFGVELG---QHMIRVNSVHPTHVKTPM  215 (286)
T ss_dssp             EEEEECCGGGT--------------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEESSBSSTT
T ss_pred             EEEEECchhhc--------------------cCCCCccHHHHHHHHHHHHHHHHHHHhc---ccCeEEEEEecCcccCCc
Confidence            99999999998                    7888999999999999999999999998   789999999999999999


Q ss_pred             cccchhHHH------------HHH---HHHHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017812          276 MREVPSFLS------------LMA---FTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  330 (365)
Q Consensus       276 ~~~~~~~~~------------~~~---~~~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~  330 (365)
                      .+.......            ...   .....| +++.+|+|+|+++++++... ...+|+.+.+|+|..+
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~l  285 (286)
T 3uve_A          216 LHNEGTFKMFRPDLENPGPDDMAPICQMFHTLP-IPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSCL  285 (286)
T ss_dssp             TSSHHHHHHHCTTSSSCCHHHHHHHHHTTCSSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             ccccchhhhccccccccchhhHHHHHHhhhccC-CCcCCHHHHHHHHHHHcCccccCCcCCEEeECCcccc
Confidence            864221100            000   001112 67889999999999544321 2568999999999754

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=100.00  E-value=2.4e-43  Score=320.49  Aligned_cols=240  Identities=20%  Similarity=0.245  Sum_probs=207.0

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.++++++.+++.+.  +.++.++++|++|.++++++++++.+
T Consensus        29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (275)
T 4imr_A           29 FGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIAS--GGTAQELAGDLSEAGAGTDLIERAEA  106 (275)
T ss_dssp             HCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHT--TCCEEEEECCTTSTTHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHHH
Confidence            3588999999999999999999999999999999999999999998888775  56789999999999999999999887


Q ss_pred             HHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017812          135 WLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~  212 (365)
                            . +++|+||||||+..  +..+.+.++|++++++|+.|+++++++++|.|++++ .|+||++||.++.      
T Consensus       107 ------~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS~~~~------  172 (275)
T 4imr_A          107 ------I-APVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARK-WGRVVSIGSINQL------  172 (275)
T ss_dssp             ------H-SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT------
T ss_pred             ------h-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHhC------
Confidence                  4 78999999999863  455789999999999999999999999999998775 6999999999988      


Q ss_pred             CCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh--HHHHHHHHH
Q 017812          213 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS--FLSLMAFTV  290 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~--~~~~~~~~~  290 (365)
                                    .+.++...|++||+|+++|+++++.|++   +.||+||+|+||+|+|++......  .........
T Consensus       173 --------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~  235 (275)
T 4imr_A          173 --------------RPKSVVTAYAATKAAQHNLIQSQARDFA---GDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVR  235 (275)
T ss_dssp             --------------SCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHH
T ss_pred             --------------CCCCCchhhHHHHHHHHHHHHHHHHHhc---ccCcEEEEEEeccccCcccccccccChHHHHHHHh
Confidence                          6777888999999999999999999998   789999999999999998765322  111122222


Q ss_pred             HH-HhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCC
Q 017812          291 LK-LLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKG  327 (365)
Q Consensus       291 ~~-~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g  327 (365)
                      .. |++|+.+|+|+|+++++++... ...+|+.+.+|+|
T Consensus       236 ~~~p~~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG  274 (275)
T 4imr_A          236 TLNWMGRAGRPEEMVGAALFLASEACSFMTGETIFLTGG  274 (275)
T ss_dssp             HHSTTCSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESSC
T ss_pred             hcCccCCCcCHHHHHHHHHHHcCcccCCCCCCEEEeCCC
Confidence            33 7889999999999999544322 3568999999887

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=100.00  E-value=1.1e-42  Score=317.88  Aligned_cols=258  Identities=16%  Similarity=0.195  Sum_probs=202.4

Q ss_pred             CCCCCEEEEecCC--ChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHH
Q 017812           56 GIKRPVCIVTGAT--SGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  133 (365)
Q Consensus        56 ~~~~k~vlITGas--sGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~  133 (365)
                      +++||++|||||+  +|||+++|++|+++|++|++++|+.+ .++..+++.+..+  .+.++++|++|+++++++++++.
T Consensus        18 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~--~~~~~~~Dl~~~~~v~~~~~~~~   94 (285)
T 2p91_A           18 LLEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKGFG--SDLVVKCDVSLDEDIKNLKKFLE   94 (285)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHTT--CCCEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHhcC--CeEEEEcCCCCHHHHHHHHHHHH
Confidence            4789999999999  99999999999999999999999985 4555666655432  36889999999999999999998


Q ss_pred             HHHhccCCCCCeeEEEecCCccc------CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccc
Q 017812          134 QWLLDSDMHSSIQLLINNAGILA------TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRN  207 (365)
Q Consensus       134 ~~~~~~~~~~~id~lv~nAG~~~------~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~  207 (365)
                      +      .++++|+||||||+..      +..+.+.+++++++++|+.|+++++++++|.|.++  .|+||++||.++. 
T Consensus        95 ~------~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~g~iv~isS~~~~-  165 (285)
T 2p91_A           95 E------NWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGR--NGAIVTLSYYGAE-  165 (285)
T ss_dssp             H------HTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTS--CCEEEEEECGGGT-
T ss_pred             H------HcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc--CCEEEEEccchhc-
Confidence            8      5689999999999864      34477899999999999999999999999999764  4899999999887 


Q ss_pred             cccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHH-H
Q 017812          208 VFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSL-M  286 (365)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~-~  286 (365)
                                         .+.++...|++||+|+++|+++++.|++   +.||+||+|+||+|+|++.+........ .
T Consensus       166 -------------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~  223 (285)
T 2p91_A          166 -------------------KVVPHYNVMGIAKAALESTVRYLAYDIA---KHGHRINAISAGPVKTLAAYSITGFHLLME  223 (285)
T ss_dssp             -------------------SBCTTTTHHHHHHHHHHHHHHHHHHHHH---TTTCEEEEEEECCCCCSCC--CTTHHHHHH
T ss_pred             -------------------cCCCCccHHHHHHHHHHHHHHHHHHHhc---ccCcEEEEEEeCcccCchhhcccchHHHHH
Confidence                               6777888999999999999999999998   7899999999999999997654322111 1


Q ss_pred             HHHHHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccccCCcccCCHHHHHHHHHH
Q 017812          287 AFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVNSSALSFNSKLAGELWTT  348 (365)
Q Consensus       287 ~~~~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~~~~~~~~d~~~~~~lw~~  348 (365)
                      ......|++++.+|+|+|+.+++++... ...+|+.+..++|... .+....|++.+++||+.
T Consensus       224 ~~~~~~p~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgg~~~-~~~~~~~~~~~~~lw~~  285 (285)
T 2p91_A          224 HTTKVNPFGKPITIEDVGDTAVFLCSDWARAITGEVVHVDNGYHI-MGVFGREEEIKKEVYGD  285 (285)
T ss_dssp             HHHHHSTTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGG-BSCC-------------
T ss_pred             HHHhcCCCCCCcCHHHHHHHHHHHcCCcccCCCCCEEEECCCccc-ccccCChHHHHHHhcCC
Confidence            1222346778899999999999554321 2457999999998766 35668899999999974

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=100.00  E-value=2.5e-43  Score=320.58  Aligned_cols=245  Identities=19%  Similarity=0.283  Sum_probs=209.1

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.  +.++.++++|++|+++++++++++.+
T Consensus        28 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~v~~~~~~~~~  105 (276)
T 3r1i_A           28 FDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGV--GGKALPIRCDVTQPDQVRGMLDQMTG  105 (276)
T ss_dssp             GCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT--TCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            4688999999999999999999999999999999999999999999998765  45789999999999999999999998


Q ss_pred             HHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017812          135 WLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~  212 (365)
                            .++++|+||||||+..  +..+.+.++|++++++|+.|+++++++++|.|.+++..|+||++||.++...    
T Consensus       106 ------~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~----  175 (276)
T 3r1i_A          106 ------ELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHII----  175 (276)
T ss_dssp             ------HHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC----
T ss_pred             ------HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhccc----
Confidence                  4578999999999874  3457799999999999999999999999999988754589999999987611    


Q ss_pred             CCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHH
Q 017812          213 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLK  292 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~  292 (365)
                                    ...++...|++||+|++.|+++++.|++   +.||+||+|+||+|+|++.+..+....  ......
T Consensus       176 --------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gIrvn~v~PG~v~T~~~~~~~~~~~--~~~~~~  236 (276)
T 3r1i_A          176 --------------NIPQQVSHYCTSKAAVVHLTKAMAVELA---PHQIRVNSVSPGYIRTELVEPLADYHA--LWEPKI  236 (276)
T ss_dssp             --------------CCSSCCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECCBCSTTTGGGGGGHH--HHGGGS
T ss_pred             --------------CCCCCcchHHHHHHHHHHHHHHHHHHHh---hcCcEEEEEeeCCCcCCccccchHHHH--HHHhcC
Confidence                          1224678999999999999999999998   789999999999999999876644321  222334


Q ss_pred             HhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017812          293 LLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  330 (365)
Q Consensus       293 ~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~  330 (365)
                      |++|+.+|+|+|+++++++... ...+|+.+.+|+|...
T Consensus       237 p~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~~  275 (276)
T 3r1i_A          237 PLGRMGRPEELTGLYLYLASAASSYMTGSDIVIDGGYTC  275 (276)
T ss_dssp             TTSSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred             CCCCCcCHHHHHHHHHHHcCccccCccCcEEEECcCccC
Confidence            7789999999999999544322 3568999999998653

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=100.00  E-value=8.4e-43  Score=316.26  Aligned_cols=238  Identities=23%  Similarity=0.279  Sum_probs=202.8

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecC-chhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHH
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRS-SHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  133 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~  133 (365)
                      .+++||++|||||++|||+++|++|+++|++|++++++ .+.++++.+++.+.  +.++.++++|++|+++++++++++.
T Consensus        14 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~   91 (270)
T 3is3_A           14 GRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKAL--GSDAIAIKADIRQVPEIVKLFDQAV   91 (270)
T ss_dssp             TCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            45899999999999999999999999999999998764 56677888888765  5678999999999999999999998


Q ss_pred             HHHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc-cccccc
Q 017812          134 QWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT-HRNVFN  210 (365)
Q Consensus       134 ~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~-~~~~~~  210 (365)
                      +      .++++|+||||||+..  +..+.+.++|++++++|+.|+++++++++|+|++   .|+||++||.. +.    
T Consensus        92 ~------~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~---~g~iv~isS~~~~~----  158 (270)
T 3is3_A           92 A------HFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTE---GGRIVLTSSNTSKD----  158 (270)
T ss_dssp             H------HHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT---TCEEEEECCTTTTT----
T ss_pred             H------HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc---CCeEEEEeCchhcc----
Confidence            8      4578999999999863  4457899999999999999999999999999976   48999999988 44    


Q ss_pred             ccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc-----------
Q 017812          211 AQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV-----------  279 (365)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~-----------  279 (365)
                                      .+.++...|++||+|+++|+++++.|++   +.||+||+|+||+|+|++.+..           
T Consensus       159 ----------------~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~  219 (270)
T 3is3_A          159 ----------------FSVPKHSLYSGSKGAVDSFVRIFSKDCG---DKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSY  219 (270)
T ss_dssp             ----------------CCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGS
T ss_pred             ----------------CCCCCCchhHHHHHHHHHHHHHHHHHhc---ccCeEEEEEEeCCccChhhhhhhhhcccccccc
Confidence                            5778889999999999999999999998   8899999999999999997531           


Q ss_pred             hhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhcCCC---CCcccEEeCCCCc
Q 017812          280 PSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGR  328 (365)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~p~e~A~~i~~~~l~~~---~~~G~~~~~~~g~  328 (365)
                      .............|++|+.+|+|+|+++++  |.++   ..+|+.+.+|+|.
T Consensus       220 ~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~--L~s~~~~~itG~~i~vdGG~  269 (270)
T 3is3_A          220 TAEQRQQMAAHASPLHRNGWPQDVANVVGF--LVSKEGEWVNGKVLTLDGGA  269 (270)
T ss_dssp             CHHHHHHHHHHHSTTCSCBCHHHHHHHHHH--HTSGGGTTCCSCEEEESTTC
T ss_pred             chHHHHHHHHhcCCCCCCCCHHHHHHHHHH--HcCCccCCccCcEEEeCCCC
Confidence            111122223344578899999999999994  4443   4689999999885

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=100.00  E-value=4.3e-43  Score=319.13  Aligned_cols=241  Identities=23%  Similarity=0.284  Sum_probs=206.7

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++     +.++.++++|++|+++++++++++.+
T Consensus        25 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~~~   99 (277)
T 3gvc_A           25 PDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI-----GCGAAACRVDVSDEQQIIAMVDACVA   99 (277)
T ss_dssp             --CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-----CSSCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-----CCcceEEEecCCCHHHHHHHHHHHHH
Confidence            3588999999999999999999999999999999999999888888776     55789999999999999999999988


Q ss_pred             HHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017812          135 WLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~  212 (365)
                            .++++|+||||||+..  +..+.+.+++++++++|+.|+++++++++|.|++++ .|+||++||.++.      
T Consensus       100 ------~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS~~~~------  166 (277)
T 3gvc_A          100 ------AFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERG-GGAIVNLSSLAGQ------  166 (277)
T ss_dssp             ------HHSSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGT------
T ss_pred             ------HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhc------
Confidence                  4578999999999863  455789999999999999999999999999998876 7999999999988      


Q ss_pred             CCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh----HH-H-HH
Q 017812          213 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS----FL-S-LM  286 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~----~~-~-~~  286 (365)
                                    .+.++...|++||+|+++|+++++.|++   +.||+||+|+||+|+|++.+....    .. . ..
T Consensus       167 --------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~  229 (277)
T 3gvc_A          167 --------------VAVGGTGAYGMSKAGIIQLSRITAAELR---SSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGA  229 (277)
T ss_dssp             --------------SCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCCHHHHHHHTCC------CCH
T ss_pred             --------------cCCCCchhHHHHHHHHHHHHHHHHHHhc---ccCeEEEEEeeCCccCchHHHhhhcchhhHHHHhh
Confidence                          7888999999999999999999999998   889999999999999998654221    00 0 01


Q ss_pred             HHHHHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017812          287 AFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  330 (365)
Q Consensus       287 ~~~~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~  330 (365)
                      ......|++|+.+|+|+|+++++++... ...+|+.+.+|+|...
T Consensus       230 ~~~~~~~~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~~~  274 (277)
T 3gvc_A          230 RSMIARLQGRMAAPEEMAGIVVFLLSDDASMITGTTQIADGGTIA  274 (277)
T ss_dssp             HHHHHHHHSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             hhhhhccccCCCCHHHHHHHHHHHcCCccCCccCcEEEECCcchh
Confidence            1122457789999999999999544322 3568999999999765

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=100.00  E-value=2.8e-43  Score=315.05  Aligned_cols=240  Identities=21%  Similarity=0.268  Sum_probs=205.9

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEec-CchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGR-SSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      +.+|++|||||++|||+++|++|+++|++|++++| +.++++++.+++...  +.++.++++|++|.++++++++++.+ 
T Consensus         2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~-   78 (246)
T 3osu_A            2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAK--GVDSFAIQANVADADEVKAMIKEVVS-   78 (246)
T ss_dssp             CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TSCEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHH-
Confidence            46899999999999999999999999999999887 557788888888765  56789999999999999999999988 


Q ss_pred             HhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                           .++++|+||||||+..  +..+.+.++|++++++|+.|+++++++++|+|++++ .|+||++||.++.       
T Consensus        79 -----~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~-------  145 (246)
T 3osu_A           79 -----QFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQR-SGAIINLSSVVGA-------  145 (246)
T ss_dssp             -----HHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHH-------
T ss_pred             -----HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhhc-------
Confidence                 4578999999999874  456789999999999999999999999999998765 6899999999988       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  293 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  293 (365)
                                   .+.++...|++||+|+++|+++++.|++   +.||+||+|+||+|.|++.+...+... .......|
T Consensus       146 -------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~vn~v~PG~v~t~~~~~~~~~~~-~~~~~~~p  208 (246)
T 3osu_A          146 -------------VGNPGQANYVATKAGVIGLTKSAARELA---SRGITVNAVAPGFIVSDMTDALSDELK-EQMLTQIP  208 (246)
T ss_dssp             -------------HCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBGGGCCSCSCHHHH-HHHHTTCT
T ss_pred             -------------CCCCCChHHHHHHHHHHHHHHHHHHHhc---ccCeEEEEEEECCCcCCcccccCHHHH-HHHHhcCC
Confidence                         7778899999999999999999999998   789999999999999999876644321 22223357


Q ss_pred             hcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017812          294 LGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  329 (365)
Q Consensus       294 ~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~  329 (365)
                      ++++.+|+|+|+++++++... ...+|+.+..++|..
T Consensus       209 ~~r~~~~~dva~~v~~l~s~~~~~itG~~i~vdgG~~  245 (246)
T 3osu_A          209 LARFGQDTDIANTVAFLASDKAKYITGQTIHVNGGMY  245 (246)
T ss_dssp             TCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTSC
T ss_pred             CCCCcCHHHHHHHHHHHhCccccCCCCCEEEeCCCcc
Confidence            788999999999999433322 245799999998854

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=100.00  E-value=4.7e-43  Score=319.64  Aligned_cols=246  Identities=18%  Similarity=0.227  Sum_probs=201.3

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEec-CchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHH
Q 017812           54 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGR-SSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  132 (365)
Q Consensus        54 ~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~  132 (365)
                      +.++++|++|||||++|||+++|++|+++|++|++++| +.+.++++.+++.... +.++.++++|++|.++++++++++
T Consensus        20 ~~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~   98 (281)
T 3v2h_A           20 FQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLS-SGTVLHHPADMTKPSEIADMMAMV   98 (281)
T ss_dssp             --CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTC-SSCEEEECCCTTCHHHHHHHHHHH
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhcc-CCcEEEEeCCCCCHHHHHHHHHHH
Confidence            34688999999999999999999999999999999999 6677888888876553 457899999999999999999999


Q ss_pred             HHHHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc
Q 017812          133 QQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN  210 (365)
Q Consensus       133 ~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~  210 (365)
                      .+      .++++|+||||||+..  +..+.+.++|++++++|+.|+++++++++|.|++++ .|+||++||.++.    
T Consensus        99 ~~------~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~----  167 (281)
T 3v2h_A           99 AD------RFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKG-WGRIINIASAHGL----  167 (281)
T ss_dssp             HH------HTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT----
T ss_pred             HH------HCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECCcccc----
Confidence            98      5689999999999863  345779999999999999999999999999998876 6999999999988    


Q ss_pred             ccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHH-----
Q 017812          211 AQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSL-----  285 (365)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~-----  285 (365)
                                      .+.++...|++||+|+++|+++++.|++   +.||+||+|+||+|+|++.+........     
T Consensus       168 ----------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~  228 (281)
T 3v2h_A          168 ----------------VASPFKSAYVAAKHGIMGLTKTVALEVA---ESGVTVNSICPGYVLTPLVEKQIPDQARTRGIT  228 (281)
T ss_dssp             ----------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCC-----------------
T ss_pred             ----------------cCCCCchHHHHHHHHHHHHHHHHHHHhh---hcCcEEEEEECCCCcCcchhhhcchhhhhcCCC
Confidence                            7888899999999999999999999998   7899999999999999997653221100     


Q ss_pred             ------HHHHHHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017812          286 ------MAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  330 (365)
Q Consensus       286 ------~~~~~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~  330 (365)
                            .......|++++.+|+|+|+++++++... ...+|+.+.+|+|...
T Consensus       229 ~~~~~~~~~~~~~p~~r~~~~edvA~~v~~L~s~~a~~itG~~i~vdGG~~~  280 (281)
T 3v2h_A          229 EEQVINEVMLKGQPTKKFITVEQVASLALYLAGDDAAQITGTHVSMDGGWTA  280 (281)
T ss_dssp             -----------CCTTCSCBCHHHHHHHHHHHHSSGGGGCCSCEEEESTTGGG
T ss_pred             HHHHHHHHHHhcCCCCCccCHHHHHHHHHHHcCCCcCCCCCcEEEECCCccC
Confidence                  01122246778999999999999544322 2468999999998654

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.8e-43  Score=318.72  Aligned_cols=238  Identities=25%  Similarity=0.300  Sum_probs=195.2

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEE-ecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLV-GRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      ++||++|||||++|||+++|++|+++|++|+++ .|+.+.++++.+++...  +.++.++++|++|+++++++++++.+ 
T Consensus        25 ~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~-  101 (267)
T 3u5t_A           25 ETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAA--GGKALTAQADVSDPAAVRRLFATAEE-  101 (267)
T ss_dssp             --CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHH-
Confidence            579999999999999999999999999999998 55667788888887665  45789999999999999999999998 


Q ss_pred             HhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                           .++++|+||||||+..  +..+.+.++|++++++|+.|+++++++++|.|++   .|+||++||.++.       
T Consensus       102 -----~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~---~g~iv~isS~~~~-------  166 (267)
T 3u5t_A          102 -----AFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRV---GGRIINMSTSQVG-------  166 (267)
T ss_dssp             -----HHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCTHHH-------
T ss_pred             -----HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh---CCeEEEEeChhhc-------
Confidence                 4578999999999863  4457889999999999999999999999999975   4899999999987       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  293 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  293 (365)
                                   .+.++..+|++||+|+++|+++++.|++   +.||+||+|+||+|+|++.................|
T Consensus       167 -------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p  230 (267)
T 3u5t_A          167 -------------LLHPSYGIYAAAKAGVEAMTHVLSKELR---GRDITVNAVAPGPTATDLFLEGKSDEVRDRFAKLAP  230 (267)
T ss_dssp             -------------HCCTTCHHHHHHHHHHHHHHHHHHHHTT---TSCCEEEEEEECCBC-----------CHHHHHTSST
T ss_pred             -------------cCCCCchHHHHHHHHHHHHHHHHHHHhh---hhCCEEEEEEECCCcCccccccCCHHHHHHHHhcCC
Confidence                         6778889999999999999999999998   889999999999999999765322211222333457


Q ss_pred             hcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCc
Q 017812          294 LGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  328 (365)
Q Consensus       294 ~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~  328 (365)
                      ++|+.+|+|+|+++++++... ...+|+.+.+|+|.
T Consensus       231 ~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~  266 (267)
T 3u5t_A          231 LERLGTPQDIAGAVAFLAGPDGAWVNGQVLRANGGI  266 (267)
T ss_dssp             TCSCBCHHHHHHHHHHHHSTTTTTCCSEEEEESSSC
T ss_pred             CCCCcCHHHHHHHHHHHhCccccCccCCEEEeCCCc
Confidence            788999999999999544322 24589999999884

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=100.00  E-value=9.7e-43  Score=315.11  Aligned_cols=247  Identities=19%  Similarity=0.185  Sum_probs=205.3

Q ss_pred             CCCCCCCCCEEEEecCC-ChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHH
Q 017812           52 PPITGIKRPVCIVTGAT-SGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKD  130 (365)
Q Consensus        52 ~~~~~~~~k~vlITGas-sGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~  130 (365)
                      +.+.++++|++|||||+ +|||+++|++|+++|++|++++|+.++++++.+++.+.. +.++.++++|++|+++++++++
T Consensus        15 ~~~~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~   93 (266)
T 3o38_A           15 DGHGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLG-LGRVEAVVCDVTSTEAVDALIT   93 (266)
T ss_dssp             CCCSTTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTC-SSCEEEEECCTTCHHHHHHHHH
T ss_pred             ccccCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcC-CCceEEEEeCCCCHHHHHHHHH
Confidence            44567899999999998 599999999999999999999999999999999986654 4689999999999999999999


Q ss_pred             HHHHHHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccc
Q 017812          131 SLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNV  208 (365)
Q Consensus       131 ~~~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~  208 (365)
                      ++.+      .++++|+||||||+..  +..+.+.+++++++++|+.|+++++++++|+|++++..++||++||.++.  
T Consensus        94 ~~~~------~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~--  165 (266)
T 3o38_A           94 QTVE------KAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGW--  165 (266)
T ss_dssp             HHHH------HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGT--
T ss_pred             HHHH------HhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHc--
Confidence            9988      4578999999999864  34577999999999999999999999999999987447899999999988  


Q ss_pred             ccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHH
Q 017812          209 FNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAF  288 (365)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~  288 (365)
                                        .+.++...|++||+|+++|+++++.|++   +.||+|++|+||+|+|++.+...........
T Consensus       166 ------------------~~~~~~~~Y~~sKaa~~~~~~~la~e~~---~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~  224 (266)
T 3o38_A          166 ------------------RAQHSQSHYAAAKAGVMALTRCSAIEAV---EFGVRINAVSPSIARHKFLEKTSSSELLDRL  224 (266)
T ss_dssp             ------------------CCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECCCCC---------------
T ss_pred             ------------------CCCCCCchHHHHHHHHHHHHHHHHHHHH---HcCcEEEEEeCCcccchhhhccCcHHHHHHH
Confidence                              7788899999999999999999999998   7899999999999999998765432222223


Q ss_pred             HHHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCc
Q 017812          289 TVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  328 (365)
Q Consensus       289 ~~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~  328 (365)
                      ....+++++.+|+|+|+.+++++... ...+|+++.+++|.
T Consensus       225 ~~~~~~~r~~~~~dva~~i~~l~s~~~~~~tG~~i~vdgG~  265 (266)
T 3o38_A          225 ASDEAFGRAAEPWEVAATIAFLASDYSSYMTGEVVSVSSQR  265 (266)
T ss_dssp             --CCTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESSCC
T ss_pred             HhcCCcCCCCCHHHHHHHHHHHcCccccCccCCEEEEcCCc
Confidence            33346778999999999999655432 35789999999885

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=2.2e-43  Score=321.74  Aligned_cols=244  Identities=20%  Similarity=0.204  Sum_probs=203.9

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEec-------------CchhHHHHHHHHHhhcCCCceEEEEecCC
Q 017812           54 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGR-------------SSHLLSETMADITSRNKDARLEAFQVDLS  120 (365)
Q Consensus        54 ~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r-------------~~~~~~~~~~~l~~~~~~~~~~~~~~Dls  120 (365)
                      +.+++||++|||||++|||+++|++|+++|++|++++|             +.++++++.+++...  +.++.++++|++
T Consensus        10 ~~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~   87 (280)
T 3pgx_A           10 AGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQ--GRKALTRVLDVR   87 (280)
T ss_dssp             -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTT--TCCEEEEECCTT
T ss_pred             ccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhc--CCeEEEEEcCCC
Confidence            45689999999999999999999999999999999998             677888888887665  567899999999


Q ss_pred             ChhhHHHHHHHHHHHHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEE
Q 017812          121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIV  198 (365)
Q Consensus       121 ~~~~v~~~~~~~~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV  198 (365)
                      |+++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.|+++++++++|+|++++..|+||
T Consensus        88 ~~~~v~~~~~~~~~------~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv  161 (280)
T 3pgx_A           88 DDAALRELVADGME------QFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIV  161 (280)
T ss_dssp             CHHHHHHHHHHHHH------HHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEE
T ss_pred             CHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEE
Confidence            99999999999988      4588999999999874  445789999999999999999999999999998764468999


Q ss_pred             EEcCCcccccccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcccc
Q 017812          199 NVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE  278 (365)
Q Consensus       199 ~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~  278 (365)
                      ++||.++.                    .+.++...|++||+|+++|+++++.|++   +.||+||+|+||+|+|++.+.
T Consensus       162 ~isS~~~~--------------------~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gi~vn~v~PG~v~t~~~~~  218 (280)
T 3pgx_A          162 VVSSSAGL--------------------KATPGNGHYSASKHGLTALTNTLAIELG---EYGIRVNSIHPYSVETPMIEP  218 (280)
T ss_dssp             EECCGGGT--------------------SCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCSTTCCH
T ss_pred             EEcchhhc--------------------cCCCCchhHHHHHHHHHHHHHHHHHHhh---hcCeEEEEEeeCcccCcccch
Confidence            99999998                    7888899999999999999999999998   789999999999999999764


Q ss_pred             chhHHHHHH---------HHHHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017812          279 VPSFLSLMA---------FTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  329 (365)
Q Consensus       279 ~~~~~~~~~---------~~~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~  329 (365)
                      .........         .....|. |+.+|+|+|+++++++... ...+|+.+.+|+|..
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~-r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~  278 (280)
T 3pgx_A          219 EAMMEIFARHPSFVHSFPPMPVQPN-GFMTADEVADVVAWLAGDGSGTLTGTQIPVDKGAL  278 (280)
T ss_dssp             HHHHHHHHHCGGGGGGSCCBTTBCS-SCBCHHHHHHHHHHHHSGGGTTCSSCEEEESTTGG
T ss_pred             hhhhhhhhcCchhhhhhhhcccCCC-CCCCHHHHHHHHHHHhCccccCCCCCEEEECCCcc
Confidence            211000000         0001122 5779999999999544322 246899999999864

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.4e-43  Score=317.59  Aligned_cols=240  Identities=21%  Similarity=0.214  Sum_probs=191.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++     +.++.++++|++|+++++++++++.+ 
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~-   77 (257)
T 3tpc_A            4 QLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL-----GAAVRFRNADVTNEADATAALAFAKQ-   77 (257)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC-----------------CEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh-----CCceEEEEccCCCHHHHHHHHHHHHH-
Confidence            478999999999999999999999999999999999999888877766     45789999999999999999999998 


Q ss_pred             HhccCCCCCeeEEEecCCcccCC------CCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcC-----CCCCeEEEEcCCc
Q 017812          136 LLDSDMHSSIQLLINNAGILATS------SRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNS-----PVPSRIVNVTSFT  204 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~~~------~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~-----~~~g~iV~vsS~~  204 (365)
                           .++++|+||||||+....      .+.+.++|++++++|+.|+++++++++|+|+++     +..|+||++||.+
T Consensus        78 -----~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~  152 (257)
T 3tpc_A           78 -----EFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIA  152 (257)
T ss_dssp             -----HHSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTH
T ss_pred             -----HcCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechh
Confidence                 457899999999987432      256889999999999999999999999999875     2368999999999


Q ss_pred             ccccccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHH
Q 017812          205 HRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLS  284 (365)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~  284 (365)
                      +.                    .+.++...|++||+|+++|+++++.|++   +.||+||+|+||+|+|++.+..+....
T Consensus       153 ~~--------------------~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gi~vn~v~PG~v~t~~~~~~~~~~~  209 (257)
T 3tpc_A          153 AF--------------------DGQIGQAAYAASKGGVAALTLPAARELA---RFGIRVVTIAPGIFDTPMMAGMPQDVQ  209 (257)
T ss_dssp             HH--------------------HCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECCBSCC----------
T ss_pred             hc--------------------cCCCCCcchHHHHHHHHHHHHHHHHHHH---HcCeEEEEEEeCCCCChhhccCCHHHH
Confidence            88                    7788899999999999999999999998   789999999999999999876543221


Q ss_pred             HHHHHHHHHh-cCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcccc
Q 017812          285 LMAFTVLKLL-GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  331 (365)
Q Consensus       285 ~~~~~~~~~~-~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~~  331 (365)
                       .......|+ +|+.+|+|+|+++++++. +...+|+.+.+|+|..+.
T Consensus       210 -~~~~~~~p~~~r~~~~~dva~~v~~l~s-~~~itG~~i~vdGG~~~~  255 (257)
T 3tpc_A          210 -DALAASVPFPPRLGRAEEYAALVKHICE-NTMLNGEVIRLDGALRMA  255 (257)
T ss_dssp             -----CCSSSSCSCBCHHHHHHHHHHHHH-CTTCCSCEEEESTTCCC-
T ss_pred             -HHHHhcCCCCCCCCCHHHHHHHHHHHcc-cCCcCCcEEEECCCccCC
Confidence             111122345 788999999999997663 357899999999997663

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=100.00  E-value=1.4e-42  Score=311.63  Aligned_cols=238  Identities=23%  Similarity=0.296  Sum_probs=203.1

Q ss_pred             CCCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecC--CChhhHHHHHH
Q 017812           53 PITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDL--SSFQSVLKFKD  130 (365)
Q Consensus        53 ~~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl--s~~~~v~~~~~  130 (365)
                      ....++||+++||||++|||+++|++|+++|++|++++|+.++++++.+++.+.. +.++.++.+|+  +|.++++++++
T Consensus         6 ~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~   84 (252)
T 3f1l_A            6 KQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEET-GRQPQWFILDLLTCTSENCQQLAQ   84 (252)
T ss_dssp             CTTTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-SCCCEEEECCTTTCCHHHHHHHHH
T ss_pred             cccccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc-CCCceEEEEecccCCHHHHHHHHH
Confidence            3445899999999999999999999999999999999999999999998887764 34778999999  99999999999


Q ss_pred             HHHHHHhccCCCCCeeEEEecCCcc---cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccc
Q 017812          131 SLQQWLLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRN  207 (365)
Q Consensus       131 ~~~~~~~~~~~~~~id~lv~nAG~~---~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~  207 (365)
                      ++.+      .++++|+||||||+.   .+..+.++++|++++++|+.|+++++++++|+|++++ .|+||++||.++. 
T Consensus        85 ~~~~------~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~-  156 (252)
T 3f1l_A           85 RIAV------NYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSD-AGSLVFTSSSVGR-  156 (252)
T ss_dssp             HHHH------HCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGT-
T ss_pred             HHHH------hCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCC-CCEEEEECChhhc-
Confidence            9988      678999999999985   3556789999999999999999999999999998876 7999999999988 


Q ss_pred             cccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHH
Q 017812          208 VFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMA  287 (365)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~  287 (365)
                                         .+.++...|++||+|+++|+++++.|++   +. |+||+|+||+|+|++.......     
T Consensus       157 -------------------~~~~~~~~Y~asK~a~~~l~~~la~e~~---~~-irvn~v~PG~v~t~~~~~~~~~-----  208 (252)
T 3f1l_A          157 -------------------QGRANWGAYAASKFATEGMMQVLADEYQ---QR-LRVNCINPGGTRTAMRASAFPT-----  208 (252)
T ss_dssp             -------------------SCCTTCHHHHHHHHHHHHHHHHHHHHTT---TT-CEEEEEECCSBSSHHHHHHCTT-----
T ss_pred             -------------------cCCCCCchhHHHHHHHHHHHHHHHHHhc---CC-cEEEEEecCcccCchhhhhCCc-----
Confidence                               7888899999999999999999999997   55 9999999999999986432110     


Q ss_pred             HHHHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcccc
Q 017812          288 FTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVN  331 (365)
Q Consensus       288 ~~~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~~  331 (365)
                          .+..++.+|+|+|+.+++++... ...+|+.+..|+|+...
T Consensus       209 ----~~~~~~~~p~dva~~~~~L~s~~~~~itG~~i~vdgG~~~~  249 (252)
T 3f1l_A          209 ----EDPQKLKTPADIMPLYLWLMGDDSRRKTGMTFDAQPGRKPG  249 (252)
T ss_dssp             ----CCGGGSBCTGGGHHHHHHHHSGGGTTCCSCEEESSCC----
T ss_pred             ----cchhccCCHHHHHHHHHHHcCccccCCCCCEEEeCCCcCCC
Confidence                01235679999999999654332 35689999999998753

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=100.00  E-value=1.3e-42  Score=315.34  Aligned_cols=242  Identities=23%  Similarity=0.281  Sum_probs=205.5

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      .+++||++|||||++|||+++|++|+++|++|++++|+ +.+++..+++.+.  +.++.++++|++|+++++++.+.+.+
T Consensus        27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~  103 (273)
T 3uf0_A           27 FSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADG--GGSAEAVVADLADLEGAANVAEELAA  103 (273)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-THHHHHHHHHHTT--TCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-HHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHh
Confidence            46889999999999999999999999999999999976 5567777777654  56889999999999999999666554


Q ss_pred             HHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017812          135 WLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~  212 (365)
                             ++++|+||||||+..  +..+.+.++|++++++|+.|+++++++++|.|++++ .|+||++||.++.      
T Consensus       104 -------~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~------  169 (273)
T 3uf0_A          104 -------TRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHG-SGRIVTIASMLSF------  169 (273)
T ss_dssp             -------HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT------
T ss_pred             -------cCCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchHhc------
Confidence                   478999999999874  445789999999999999999999999999998876 6999999999998      


Q ss_pred             CCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH-HHHHHHHHH
Q 017812          213 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF-LSLMAFTVL  291 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~  291 (365)
                                    .+.++...|++||+|+++|+++++.|++   +.||+||+|+||+|.|++....... .........
T Consensus       170 --------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~  232 (273)
T 3uf0_A          170 --------------QGGRNVAAYAASKHAVVGLTRALASEWA---GRGVGVNALAPGYVVTANTAALRADDERAAEITAR  232 (273)
T ss_dssp             --------------SCCSSCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHHH
T ss_pred             --------------CCCCCChhHHHHHHHHHHHHHHHHHHHh---hcCcEEEEEEeCCCcCCchhhcccCHHHHHHHHhc
Confidence                          7888899999999999999999999998   7899999999999999997654321 112223344


Q ss_pred             HHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017812          292 KLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  330 (365)
Q Consensus       292 ~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~  330 (365)
                      .|++|+.+|+|+|+++++++... ...+|+.+.+|+|...
T Consensus       233 ~p~~r~~~pedva~~v~~L~s~~a~~itG~~i~vdGG~~~  272 (273)
T 3uf0_A          233 IPAGRWATPEDMVGPAVFLASDAASYVHGQVLAVDGGWLA  272 (273)
T ss_dssp             STTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCCCCCCCHHHHHHHHHHHhCchhcCCcCCEEEECcCccC
Confidence            57889999999999999544332 3568999999999754

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=100.00  E-value=2.3e-42  Score=314.64  Aligned_cols=247  Identities=19%  Similarity=0.191  Sum_probs=200.8

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecC------------chhHHHHHHHHHhhcCCCceEEEEecCCC
Q 017812           54 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRS------------SHLLSETMADITSRNKDARLEAFQVDLSS  121 (365)
Q Consensus        54 ~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~------------~~~~~~~~~~l~~~~~~~~~~~~~~Dls~  121 (365)
                      ..+++||++|||||++|||+++|++|+++|++|++++|+            .+++++..+++...  +.++.++++|++|
T Consensus         8 ~~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~   85 (278)
T 3sx2_A            8 EGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDI--GSRIVARQADVRD   85 (278)
T ss_dssp             -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHH--TCCEEEEECCTTC
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhc--CCeEEEEeCCCCC
Confidence            346889999999999999999999999999999999987            67777777777665  4689999999999


Q ss_pred             hhhHHHHHHHHHHHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEc
Q 017812          122 FQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVT  201 (365)
Q Consensus       122 ~~~v~~~~~~~~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vs  201 (365)
                      +++++++++++.+      .++++|+||||||+.....  +.++|++++++|+.|+++++++++|+|.+++..|+||++|
T Consensus        86 ~~~v~~~~~~~~~------~~g~id~lv~nAg~~~~~~--~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~is  157 (278)
T 3sx2_A           86 RESLSAALQAGLD------ELGRLDIVVANAGIAPMSA--GDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLIS  157 (278)
T ss_dssp             HHHHHHHHHHHHH------HHCCCCEEEECCCCCCCSS--THHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEEC
T ss_pred             HHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCC--CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEc
Confidence            9999999999998      4588999999999864433  6899999999999999999999999998764468999999


Q ss_pred             CCcccccccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh
Q 017812          202 SFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS  281 (365)
Q Consensus       202 S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~  281 (365)
                      |.++....                ..+.++...|++||+|+++|+++++.|++   +.||+||+|+||+|+|++......
T Consensus       158 S~~~~~~~----------------~~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gi~vn~v~PG~v~T~~~~~~~~  218 (278)
T 3sx2_A          158 SSAGLAGV----------------GSADPGSVGYVAAKHGVVGLMRVYANLLA---GQMIRVNSIHPSGVETPMINNEFT  218 (278)
T ss_dssp             CGGGTSCC----------------CCSSHHHHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEESCBSSTTTSSHHH
T ss_pred             cHHhcCCC----------------ccCCCCchHhHHHHHHHHHHHHHHHHHHh---ccCcEEEEEecCCccCccchhhhH
Confidence            99987110                02237889999999999999999999998   889999999999999999865322


Q ss_pred             HHHHHHHHH----------HHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017812          282 FLSLMAFTV----------LKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  330 (365)
Q Consensus       282 ~~~~~~~~~----------~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~  330 (365)
                      .........          ..| +++.+|+|+|+++++++... ...+|+.+.+|+|...
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~p-~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~~~  277 (278)
T 3sx2_A          219 REWLAKMAAATDTPGAMGNAMP-VEVLAPEDVANAVAWLVSDQARYITGVTLPVDAGFLN  277 (278)
T ss_dssp             HHHHHHHHHHCC--CTTSCSSS-CSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTT
T ss_pred             HHHHhhccchhhhhhhhhhhcC-cCcCCHHHHHHHHHHHhCcccccccCCEEeECCCccc
Confidence            111110000          012 46779999999999543321 3568999999998654

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=100.00  E-value=5.9e-43  Score=316.76  Aligned_cols=247  Identities=21%  Similarity=0.219  Sum_probs=207.6

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHH
Q 017812           54 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  133 (365)
Q Consensus        54 ~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~  133 (365)
                      ..++++|+++||||++|||+++|++|+++|++|++++|+.++++++.+++.+..++.++.++++|++|+++++++++++.
T Consensus         8 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   87 (267)
T 1iy8_A            8 TTRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATT   87 (267)
T ss_dssp             --CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999999999999888888776555688999999999999999999998


Q ss_pred             HHHhccCCCCCeeEEEecCCccc---CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc
Q 017812          134 QWLLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN  210 (365)
Q Consensus       134 ~~~~~~~~~~~id~lv~nAG~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~  210 (365)
                      +      .++++|+||||||+..   +..+.+.+++++++++|+.|++++++.++|.|++++ .|+||++||.++.    
T Consensus        88 ~------~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~----  156 (267)
T 1iy8_A           88 E------RFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQG-SGMVVNTASVGGI----  156 (267)
T ss_dssp             H------HHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGT----
T ss_pred             H------HcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhhc----
Confidence            8      4578999999999863   345778999999999999999999999999998765 6899999999988    


Q ss_pred             ccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc-----hhHHHH
Q 017812          211 AQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV-----PSFLSL  285 (365)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~-----~~~~~~  285 (365)
                                      .+.++...|++||+++++|+++++.|++   +.||+||+|+||+|+|++.+..     +.....
T Consensus       157 ----------------~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~  217 (267)
T 1iy8_A          157 ----------------RGIGNQSGYAAAKHGVVGLTRNSAVEYG---RYGIRINAIAPGAIWTPMVENSMKQLDPENPRK  217 (267)
T ss_dssp             ----------------SBCSSBHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHH
T ss_pred             ----------------cCCCCCccHHHHHHHHHHHHHHHHHHHH---hcCeEEEEEEeCCCcCcchhccccccChhhhhh
Confidence                            6778889999999999999999999998   7899999999999999986542     111110


Q ss_pred             H--HHHHHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017812          286 M--AFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  330 (365)
Q Consensus       286 ~--~~~~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~  330 (365)
                      .  ......|++++.+|+|+|+.+++++... ...+|+.+..++|...
T Consensus       218 ~~~~~~~~~p~~r~~~~~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~~  265 (267)
T 1iy8_A          218 AAEEFIQVNPSKRYGEAPEIAAVVAFLLSDDASYVNATVVPIDGGQSA  265 (267)
T ss_dssp             HHHHHHTTCTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTT
T ss_pred             HHHHHhccCCCCCCcCHHHHHHHHHHHcCccccCCCCCEEEECCCccc
Confidence            0  1112236678899999999999544321 2568999999988653

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=100.00  E-value=1.3e-42  Score=313.02  Aligned_cols=243  Identities=22%  Similarity=0.225  Sum_probs=193.5

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEE-ecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHH
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLV-GRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  133 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~  133 (365)
                      .+++||++|||||++|||+++|++|+++|++|+++ .|+.+.+++..+++.+.  +.++.++++|++|+++++++++++.
T Consensus         4 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~   81 (259)
T 3edm_A            4 QRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKL--GRSALAIKADLTNAAEVEAAISAAA   81 (259)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTT--TSCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHH
Confidence            35789999999999999999999999999999998 66777788888888665  4578999999999999999999999


Q ss_pred             HHHhccCCCCCeeEEEecCCcc---cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc
Q 017812          134 QWLLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN  210 (365)
Q Consensus       134 ~~~~~~~~~~~id~lv~nAG~~---~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~  210 (365)
                      +      .++++|+||||||+.   .+..+.+.++|++++++|+.|+++++++++|+|++   .|+||++||.++.    
T Consensus        82 ~------~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~---~g~iv~isS~~~~----  148 (259)
T 3edm_A           82 D------KFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAK---GGAIVTFSSQAGR----  148 (259)
T ss_dssp             H------HHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEECCHHHH----
T ss_pred             H------HhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCEEEEEcCHHhc----
Confidence            8      458899999999976   34557899999999999999999999999999976   4899999998875    


Q ss_pred             ccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHH
Q 017812          211 AQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTV  290 (365)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~  290 (365)
                                     ..+.++...|++||+|+++|+++++.|++   +. |+||+|+||+|+|++.+.............
T Consensus       149 ---------------~~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~-I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~  209 (259)
T 3edm_A          149 ---------------DGGGPGALAYATSKGAVMTFTRGLAKEVG---PK-IRVNAVCPGMISTTFHDTFTKPEVRERVAG  209 (259)
T ss_dssp             ---------------HCCSTTCHHHHHHHHHHHHHHHHHHHHHT---TT-CEEEEEEECCBCC-----------------
T ss_pred             ---------------cCCCCCcHHHHHHHHHHHHHHHHHHHHHC---CC-CEEEEEEECCCcCcccccccChHHHHHHHh
Confidence                           13567788999999999999999999997   54 999999999999999876543222223334


Q ss_pred             HHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcccc
Q 017812          291 LKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVN  331 (365)
Q Consensus       291 ~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~~  331 (365)
                      ..|++|+.+|+|+|+.+++++... ...+|+.+.+|+|....
T Consensus       210 ~~p~~r~~~pedva~~v~~L~s~~~~~itG~~i~vdGg~~~~  251 (259)
T 3edm_A          210 ATSLKREGSSEDVAGLVAFLASDDAAYVTGACYDINGGVLFS  251 (259)
T ss_dssp             -----CCBCHHHHHHHHHHHHSGGGTTCCSCEEEESBCSSBC
T ss_pred             cCCCCCCcCHHHHHHHHHHHcCccccCccCCEEEECCCcCCC
Confidence            467889999999999999544322 24589999999987764

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=100.00  E-value=1.5e-42  Score=314.04  Aligned_cols=241  Identities=22%  Similarity=0.243  Sum_probs=205.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      +++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.+++..+..+.+|++|+++++++++     
T Consensus         7 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~-----   81 (267)
T 3t4x_A            7 QLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIE-----   81 (267)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHH-----
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHH-----
Confidence            478999999999999999999999999999999999999999999999888777789999999999999887764     


Q ss_pred             HhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                           .++++|+||||||+..  +..+.+.++|++++++|+.|+++++++++|+|++++ .|+||++||.++.       
T Consensus        82 -----~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~-------  148 (267)
T 3t4x_A           82 -----KYPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERK-EGRVIFIASEAAI-------  148 (267)
T ss_dssp             -----HCCCCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-EEEEEEECCGGGT-------
T ss_pred             -----hcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEEcchhhc-------
Confidence                 3578999999999874  345778999999999999999999999999998876 6899999999998       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh----------HH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS----------FL  283 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~----------~~  283 (365)
                                   .+.++...|++||+|+++|+++++.|++   ++||+||+|+||+++|++.+....          ..
T Consensus       149 -------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~  212 (267)
T 3t4x_A          149 -------------MPSQEMAHYSATKTMQLSLSRSLAELTT---GTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEE  212 (267)
T ss_dssp             -------------SCCTTCHHHHHHHHHHHHHHHHHHHHTT---TSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHH
T ss_pred             -------------cCCCcchHHHHHHHHHHHHHHHHHHHhC---CCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHH
Confidence                         7888999999999999999999999998   889999999999999997653211          11


Q ss_pred             HHHHHHH----HHHhcCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCccc
Q 017812          284 SLMAFTV----LKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTV  330 (365)
Q Consensus       284 ~~~~~~~----~~~~~~~~~p~e~A~~i~~~~l~-~~~~~G~~~~~~~g~~~  330 (365)
                      .......    ..|++|+.+|+|+|+++++++.. +...+|+.+.+|+|...
T Consensus       213 ~~~~~~~~~~~~~~~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~~  264 (267)
T 3t4x_A          213 AEKRFMKENRPTSIIQRLIRPEEIAHLVTFLSSPLSSAINGSALRIDGGLVR  264 (267)
T ss_dssp             HHHHHHHHHCTTCSSCSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTCSC
T ss_pred             HHHHHhhccCCcccccCccCHHHHHHHHHHHcCccccCccCCeEEECCCccc
Confidence            1111111    12468899999999999954432 23568999999999765

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=100.00  E-value=2.1e-42  Score=309.51  Aligned_cols=242  Identities=21%  Similarity=0.277  Sum_probs=211.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.++++++.+++.+.  +.++.++++|++|+++++++++++.+ 
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~-   78 (247)
T 3lyl_A            2 SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEK--GFKARGLVLNISDIESIQNFFAEIKA-   78 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHH-
Confidence            367999999999999999999999999999999999999999998888776  46789999999999999999999988 


Q ss_pred             HhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                           .++++|+||||||+..  +..+.+.+++++++++|+.|++++++.++|.|.+++ .|+||++||..+.       
T Consensus        79 -----~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~-------  145 (247)
T 3lyl_A           79 -----ENLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKR-WGRIISIGSVVGS-------  145 (247)
T ss_dssp             -----TTCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHH-------
T ss_pred             -----HcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CeEEEEEcchhhc-------
Confidence                 6789999999999874  345779999999999999999999999999998766 6899999999988       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  293 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  293 (365)
                                   .+.++...|++||+|++.|+++++.|+.   ++||+|++|+||+|+|++.+....... .......|
T Consensus       146 -------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~PG~v~t~~~~~~~~~~~-~~~~~~~~  208 (247)
T 3lyl_A          146 -------------AGNPGQTNYCAAKAGVIGFSKSLAYEVA---SRNITVNVVAPGFIATDMTDKLTDEQK-SFIATKIP  208 (247)
T ss_dssp             -------------HCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCCTTTTTSCHHHH-HHHHTTST
T ss_pred             -------------cCCCCcHHHHHHHHHHHHHHHHHHHHHH---HcCeEEEEEeeCcEecccchhccHHHH-HHHhhcCC
Confidence                         7778899999999999999999999998   789999999999999999887654322 12223346


Q ss_pred             hcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017812          294 LGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  330 (365)
Q Consensus       294 ~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~  330 (365)
                      .+++.+|+|+|+.+++++... ...+|+.+..++|..+
T Consensus       209 ~~~~~~~~dva~~i~~l~s~~~~~~tG~~i~vdgG~~~  246 (247)
T 3lyl_A          209 SGQIGEPKDIAAAVAFLASEEAKYITGQTLHVNGGMYM  246 (247)
T ss_dssp             TCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSSC
T ss_pred             CCCCcCHHHHHHHHHHHhCCCcCCccCCEEEECCCEec
Confidence            778899999999999655332 3568999999988653

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=100.00  E-value=4.6e-42  Score=311.87  Aligned_cols=243  Identities=22%  Similarity=0.330  Sum_probs=202.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.++++++.+++.+.  +.++.++++|++|+++++++++++.+ 
T Consensus        18 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~-   94 (273)
T 1ae1_A           18 SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK--GLNVEGSVCDLLSRTERDKLMQTVAH-   94 (273)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHH-
Confidence            478999999999999999999999999999999999999988888888665  45788999999999999999999988 


Q ss_pred             HhccCCC-CCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017812          136 LLDSDMH-SSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       136 ~~~~~~~-~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~  212 (365)
                           .+ +++|+||||||+..  +..+.+.+++++++++|+.|+++++++++|+|++++ .|+||++||.++.      
T Consensus        95 -----~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~------  162 (273)
T 1ae1_A           95 -----VFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQ-NGNVIFLSSIAGF------  162 (273)
T ss_dssp             -----HTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-SEEEEEECCGGGT------
T ss_pred             -----HcCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHhhc------
Confidence                 55 78999999999863  456778999999999999999999999999998765 6899999999988      


Q ss_pred             CCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh-----HHHHHH
Q 017812          213 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS-----FLSLMA  287 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~-----~~~~~~  287 (365)
                                    .+.++...|++||+|++.|+++++.|++   +.||+||+|+||+|+|++......     ......
T Consensus       163 --------------~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~  225 (273)
T 1ae1_A          163 --------------SALPSVSLYSASKGAINQMTKSLACEWA---KDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDN  225 (273)
T ss_dssp             --------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBC-------------CHHHHHH
T ss_pred             --------------CCCCCcchhHHHHHHHHHHHHHHHHHHh---hcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHH
Confidence                          6778889999999999999999999998   789999999999999999764321     111112


Q ss_pred             HHHHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017812          288 FTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  330 (365)
Q Consensus       288 ~~~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~  330 (365)
                      .....|++|+.+|+|+|+.+++++... ...+|+.+..++|...
T Consensus       226 ~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~~  269 (273)
T 1ae1_A          226 FIVKTPMGRAGKPQEVSALIAFLCFPAASYITGQIIWADGGFTA  269 (273)
T ss_dssp             HHHHSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHhcCCCCCCcCHHHHHHHHHHHhCccccCcCCCEEEECCCccc
Confidence            223357788999999999999654322 2568999999998754

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=2.8e-42  Score=312.26  Aligned_cols=247  Identities=23%  Similarity=0.333  Sum_probs=205.9

Q ss_pred             CCCCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHH
Q 017812           52 PPITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDS  131 (365)
Q Consensus        52 ~~~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~  131 (365)
                      ++..++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++.... +.++.++++|++|++++++++++
T Consensus        14 ~~~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~   92 (267)
T 1vl8_A           14 KEVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKY-GVETMAFRCDVSNYEEVKKLLEA   92 (267)
T ss_dssp             ---CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCeEEEEEcCCCCHHHHHHHHHH
Confidence            34456899999999999999999999999999999999999998888888873332 45788999999999999999999


Q ss_pred             HHHHHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc-cccc
Q 017812          132 LQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT-HRNV  208 (365)
Q Consensus       132 ~~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~-~~~~  208 (365)
                      +.+      .++++|+||||||+..  +..+.+.++|++++++|+.|+++++++++|.|++++ .|+||++||.+ +.  
T Consensus        93 ~~~------~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~--  163 (267)
T 1vl8_A           93 VKE------KFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESD-NPSIINIGSLTVEE--  163 (267)
T ss_dssp             HHH------HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCS-SCEEEEECCGGGTC--
T ss_pred             HHH------HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEECCcchhc--
Confidence            988      4578999999999864  345778999999999999999999999999998775 68999999998 76  


Q ss_pred             ccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh-HHHHHH
Q 017812          209 FNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS-FLSLMA  287 (365)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~-~~~~~~  287 (365)
                                        .+.++...|++||++++.|+++++.|++   +.||+||+|+||+++|++.+.... ......
T Consensus       164 ------------------~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~  222 (267)
T 1vl8_A          164 ------------------VTMPNISAYAASKGGVASLTKALAKEWG---RYGIRVNVIAPGWYRTKMTEAVFSDPEKLDY  222 (267)
T ss_dssp             ------------------CCSSSCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEECCBCSTTTHHHHTCHHHHHH
T ss_pred             ------------------cCCCCChhHHHHHHHHHHHHHHHHHHhc---ccCeEEEEEEeccCccccccccccChHHHHH
Confidence                              6677889999999999999999999998   789999999999999999764321 111111


Q ss_pred             HHHHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017812          288 FTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  329 (365)
Q Consensus       288 ~~~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~  329 (365)
                      .....|++++.+|+|+|+.+++++... ...+|+.+..++|..
T Consensus       223 ~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~~  265 (267)
T 1vl8_A          223 MLKRIPLGRTGVPEDLKGVAVFLASEEAKYVTGQIIFVDGGWT  265 (267)
T ss_dssp             HHHTCTTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHhhCCCCCCcCHHHHHHHHHHHcCccccCCcCCeEEECCCCC
Confidence            122236678899999999999655432 356899999998864

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=100.00  E-value=1.5e-42  Score=312.63  Aligned_cols=235  Identities=19%  Similarity=0.225  Sum_probs=193.6

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+++.+..++.       .+.++.+|++|+++++++++++.+
T Consensus        23 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-------~~~~~~~Dv~~~~~v~~~~~~~~~   95 (260)
T 3gem_A           23 MTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQA-------GAVALYGDFSCETGIMAFIDLLKT   95 (260)
T ss_dssp             ----CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHH-------TCEEEECCTTSHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhc-------CCeEEECCCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999988764443332       268899999999999999999988


Q ss_pred             HHhccCCCCCeeEEEecCCcccC-CCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          135 WLLDSDMHSSIQLLINNAGILAT-SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~~-~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                            .++++|+||||||+... ..+.+.++|++++++|+.|+++++++++|+|++++ .|+||++||.++.       
T Consensus        96 ------~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~-------  161 (260)
T 3gem_A           96 ------QTSSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASE-VADIVHISDDVTR-------  161 (260)
T ss_dssp             ------HCSCCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGG-------
T ss_pred             ------hcCCCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CcEEEEECChhhc-------
Confidence                  66899999999998643 24667899999999999999999999999999876 6999999999988       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  293 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  293 (365)
                                   .+.++...|++||+|+++|+++++.|++   + +|+||+|+||+|.|++......   ........|
T Consensus       162 -------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~-~Irvn~v~PG~v~t~~~~~~~~---~~~~~~~~p  221 (260)
T 3gem_A          162 -------------KGSSKHIAYCATKAGLESLTLSFAARFA---P-LVKVNGIAPALLMFQPKDDAAY---RANALAKSA  221 (260)
T ss_dssp             -------------TCCSSCHHHHHHHHHHHHHHHHHHHHHT---T-TCEEEEEEECTTCC------------------CC
T ss_pred             -------------CCCCCcHhHHHHHHHHHHHHHHHHHHHC---C-CCEEEEEeecccccCCCCCHHH---HHHHHhcCC
Confidence                         7888899999999999999999999997   5 7999999999999997542111   112223346


Q ss_pred             hcCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcccc
Q 017812          294 LGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  331 (365)
Q Consensus       294 ~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~~  331 (365)
                      ++++.+|+|+|+++++++ .+...+|+.+.+|+|..+.
T Consensus       222 ~~r~~~~edva~~v~~L~-~~~~itG~~i~vdGG~~~~  258 (260)
T 3gem_A          222 LGIEPGAEVIYQSLRYLL-DSTYVTGTTLTVNGGRHVK  258 (260)
T ss_dssp             SCCCCCTHHHHHHHHHHH-HCSSCCSCEEEESTTTTTC
T ss_pred             CCCCCCHHHHHHHHHHHh-hCCCCCCCEEEECCCcccC
Confidence            778899999999999876 5667899999999998764

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=100.00  E-value=2.3e-42  Score=314.57  Aligned_cols=243  Identities=23%  Similarity=0.249  Sum_probs=203.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEec-------------CchhHHHHHHHHHhhcCCCceEEEEecCCCh
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGR-------------SSHLLSETMADITSRNKDARLEAFQVDLSSF  122 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r-------------~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~  122 (365)
                      +++||++|||||++|||+++|++|+++|++|++++|             +.++++++.+++...  +.++.++.+|++|+
T Consensus         8 ~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~   85 (277)
T 3tsc_A            8 KLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAA--NRRIVAAVVDTRDF   85 (277)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHT--TCCEEEEECCTTCH
T ss_pred             ccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhc--CCeEEEEECCCCCH
Confidence            578999999999999999999999999999999998             677778877777665  56889999999999


Q ss_pred             hhHHHHHHHHHHHHhccCCCCCeeEEEecCCcccC--CCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEE
Q 017812          123 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILAT--SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNV  200 (365)
Q Consensus       123 ~~v~~~~~~~~~~~~~~~~~~~id~lv~nAG~~~~--~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~v  200 (365)
                      ++++++++++.+      .++++|+||||||+..+  ..+.+.++|++++++|+.|+++++++++|+|.+++..|+||++
T Consensus        86 ~~v~~~~~~~~~------~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~i  159 (277)
T 3tsc_A           86 DRLRKVVDDGVA------ALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILI  159 (277)
T ss_dssp             HHHHHHHHHHHH------HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEE
T ss_pred             HHHHHHHHHHHH------HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence            999999999998      45889999999998743  4578999999999999999999999999999876546899999


Q ss_pred             cCCcccccccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccch
Q 017812          201 TSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP  280 (365)
Q Consensus       201 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~  280 (365)
                      ||.++.                    .+.++...|++||+|+++|+++|+.|++   +.||+||+|+||+|+|++.+...
T Consensus       160 sS~~~~--------------------~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gi~vn~v~PG~v~T~~~~~~~  216 (277)
T 3tsc_A          160 SSAAGM--------------------KMQPFMIHYTASKHAVTGLARAFAAELG---KHSIRVNSVHPGPVNTPMGSGDM  216 (277)
T ss_dssp             CCGGGT--------------------SCCSSCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEESSBSSGGGSHHH
T ss_pred             ccHhhC--------------------CCCCCchhhHHHHHHHHHHHHHHHHHhC---ccCeEEEEEEeCCCcCCcccchh
Confidence            999998                    7888899999999999999999999998   78999999999999999976421


Q ss_pred             hHHHHHH----------HHHHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017812          281 SFLSLMA----------FTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  330 (365)
Q Consensus       281 ~~~~~~~----------~~~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~  330 (365)
                      .......          .....|. |+.+|+|+|+++++++... ...+|+.+.+|+|...
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~p~-r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~  276 (277)
T 3tsc_A          217 VTAVGQAMETNPQLSHVLTPFLPD-WVAEPEDIADTVCWLASDESRKVTAAQIPVDQGSTQ  276 (277)
T ss_dssp             HHHHHHHHHTCGGGTTTTCCSSSC-SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             hhhhhhcccccHHHHHHhhhccCC-CCCCHHHHHHHHHHHhCccccCCcCCEEeeCCCccc
Confidence            1000000          0000122 5789999999999554332 3568999999998643

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=100.00  E-value=6.7e-42  Score=314.33  Aligned_cols=246  Identities=16%  Similarity=0.102  Sum_probs=208.0

Q ss_pred             CCCCCCCCEEEEecCCC--hHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHH
Q 017812           53 PITGIKRPVCIVTGATS--GLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKD  130 (365)
Q Consensus        53 ~~~~~~~k~vlITGass--GIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~  130 (365)
                      ++.+++||++|||||+|  |||+++|++|+++|++|++++|+.+..+.+.+...+.   ..+.++++|++|+++++++++
T Consensus        24 ~~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~  100 (296)
T 3k31_A           24 TGMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESL---GVKLTVPCDVSDAESVDNMFK  100 (296)
T ss_dssp             CCCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHH---TCCEEEECCTTCHHHHHHHHH
T ss_pred             chhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc---CCeEEEEcCCCCHHHHHHHHH
Confidence            34568899999999997  9999999999999999999999976655554444333   246899999999999999999


Q ss_pred             HHHHHHhccCCCCCeeEEEecCCcc------cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017812          131 SLQQWLLDSDMHSSIQLLINNAGIL------ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  204 (365)
Q Consensus       131 ~~~~~~~~~~~~~~id~lv~nAG~~------~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~  204 (365)
                      ++.+      .++++|+||||||+.      .+..+.+.++|++++++|+.|+++++++++|+|++   .|+||++||.+
T Consensus       101 ~~~~------~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~---~g~IV~isS~~  171 (296)
T 3k31_A          101 VLAE------EWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTN---GGSILTLSYYG  171 (296)
T ss_dssp             HHHH------HHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT---CEEEEEEECGG
T ss_pred             HHHH------HcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc---CCEEEEEEehh
Confidence            9998      457899999999986      34567899999999999999999999999999976   48999999999


Q ss_pred             ccccccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHH
Q 017812          205 HRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLS  284 (365)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~  284 (365)
                      +.                    .+.+++..|++||+|+++|+++++.|++   +.||+||+|+||+|+|++.+.......
T Consensus       172 ~~--------------------~~~~~~~~Y~asKaal~~l~~~la~e~~---~~gIrvn~v~PG~v~T~~~~~~~~~~~  228 (296)
T 3k31_A          172 AE--------------------KVVPHYNVMGVCKAALEASVKYLAVDLG---KQQIRVNAISAGPVRTLASSGISDFHY  228 (296)
T ss_dssp             GT--------------------SCCTTTTHHHHHHHHHHHHHHHHHHHHH---TTTEEEEEEEECCCCCSSCCSCHHHHH
T ss_pred             hc--------------------cCCCCchhhHHHHHHHHHHHHHHHHHHh---hcCcEEEEEEECCCcCchhhcccchHH
Confidence            88                    7888899999999999999999999998   789999999999999999887654322


Q ss_pred             H-HHHHHHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccccCC
Q 017812          285 L-MAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVNSS  333 (365)
Q Consensus       285 ~-~~~~~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~~~~  333 (365)
                      . .......|++|+.+|+|+|+++++++... ...+|+.+.+|+|..+...
T Consensus       229 ~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~~~~~  279 (296)
T 3k31_A          229 ILTWNKYNSPLRRNTTLDDVGGAALYLLSDLGRGTTGETVHVDCGYHVVGM  279 (296)
T ss_dssp             HHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCSS
T ss_pred             HHHHHHhcCCCCCCCCHHHHHHHHHHHcCCccCCccCCEEEECCCccccCC
Confidence            2 22334457889999999999999544321 3578999999999877543

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=100.00  E-value=1.8e-42  Score=314.21  Aligned_cols=230  Identities=23%  Similarity=0.272  Sum_probs=182.8

Q ss_pred             CCCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHH
Q 017812           53 PITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  132 (365)
Q Consensus        53 ~~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~  132 (365)
                      ++.++.+|++|||||++|||+++|++|+++|++|++++|+.++++++.+++     +.++.++++|++|+++++++++++
T Consensus        22 ~m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~   96 (272)
T 4dyv_A           22 SMSKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI-----GDDALCVPTDVTDPDSVRALFTAT   96 (272)
T ss_dssp             ------CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----TSCCEEEECCTTSHHHHHHHHHHH
T ss_pred             hhcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----CCCeEEEEecCCCHHHHHHHHHHH
Confidence            455678999999999999999999999999999999999999988888877     357899999999999999999999


Q ss_pred             HHHHhccCCCCCeeEEEecCCccc---CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCC-CCCeEEEEcCCccccc
Q 017812          133 QQWLLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP-VPSRIVNVTSFTHRNV  208 (365)
Q Consensus       133 ~~~~~~~~~~~~id~lv~nAG~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~-~~g~iV~vsS~~~~~~  208 (365)
                      .+      .++++|+||||||+..   +..+.+.++|++++++|+.|+++++++++|.|++++ ..|+||++||.++.  
T Consensus        97 ~~------~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~--  168 (272)
T 4dyv_A           97 VE------KFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISAT--  168 (272)
T ss_dssp             HH------HHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTT--
T ss_pred             HH------HcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhc--
Confidence            88      4578999999999863   445789999999999999999999999999998764 25899999999998  


Q ss_pred             ccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHH
Q 017812          209 FNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAF  288 (365)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~  288 (365)
                                        .+.++...|++||+|+++|+++++.|++   ..||+||+|+||+|+|++.+........  .
T Consensus       169 ------------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gI~vn~v~PG~v~T~~~~~~~~~~~~--~  225 (272)
T 4dyv_A          169 ------------------SPRPYSAPYTATKHAITGLTKSTSLDGR---VHDIACGQIDIGNADTPMAQKMKAGVPQ--A  225 (272)
T ss_dssp             ------------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEEEECC----------------
T ss_pred             ------------------CCCCCchHHHHHHHHHHHHHHHHHHHhC---ccCEEEEEEEECcccChhhhhhcccchh--h
Confidence                              7888899999999999999999999998   7899999999999999998765432211  1


Q ss_pred             HHHHHhcCCCCHHHHHHHHHHHhcCCCCCc
Q 017812          289 TVLKLLGLLQSPEKGINSVLDAALAPPETS  318 (365)
Q Consensus       289 ~~~~~~~~~~~p~e~A~~i~~~~l~~~~~~  318 (365)
                      ....+.+++.+|+|+|+++++++..++...
T Consensus       226 ~~~~~~~~~~~pedvA~~v~fL~s~~~~~~  255 (272)
T 4dyv_A          226 DLSIKVEPVMDVAHVASAVVYMASLPLDAN  255 (272)
T ss_dssp             ----------CHHHHHHHHHHHHHSCTTSC
T ss_pred             hhcccccCCCCHHHHHHHHHHHhCCCCcCc
Confidence            122355677899999999998776665443

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=100.00  E-value=2e-42  Score=310.77  Aligned_cols=242  Identities=24%  Similarity=0.293  Sum_probs=174.6

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.  +.++.++++|++|+++++++++++.+
T Consensus         5 ~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (253)
T 3qiv_A            5 MRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVAD--GGTAISVAVDVSDPESAKAMADRTLA   82 (253)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999999999999998776  46889999999999999999999998


Q ss_pred             HHhccCCCCCeeEEEecCCccc-----CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccc
Q 017812          135 WLLDSDMHSSIQLLINNAGILA-----TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVF  209 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~-----~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~  209 (365)
                            .++++|+||||||+..     +..+.+.+++++++++|+.|+++++++++|.|++++ .|+||++||.+++   
T Consensus        83 ------~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~---  152 (253)
T 3qiv_A           83 ------EFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRG-GGAIVNQSSTAAW---  152 (253)
T ss_dssp             ------HHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECC-------
T ss_pred             ------HcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CCEEEEECCcccc---
Confidence                  4578999999999842     345678999999999999999999999999998876 7999999998865   


Q ss_pred             cccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHH
Q 017812          210 NAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFT  289 (365)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~  289 (365)
                                          ++...|++||+|++.|+++++.|+.   ++||+|++|+||+|+|++.+............
T Consensus       153 --------------------~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~  209 (253)
T 3qiv_A          153 --------------------LYSNYYGLAKVGINGLTQQLSRELG---GRNIRINAIAPGPIDTEANRTTTPKEMVDDIV  209 (253)
T ss_dssp             ---------------------------CCHHHHHHHHHHHHHHTT---TTTEEEEEEEC---------------------
T ss_pred             --------------------CCCchhHHHHHHHHHHHHHHHHHHh---hcCeEEEEEEecCCcccchhhcCcHHHHHHHh
Confidence                                3456799999999999999999998   88999999999999999887643322222233


Q ss_pred             HHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcccc
Q 017812          290 VLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVN  331 (365)
Q Consensus       290 ~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~~  331 (365)
                      ...|++++.+|+|+|+++++++... ...+|+.|..++|..+.
T Consensus       210 ~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgG~~~~  252 (253)
T 3qiv_A          210 KGLPLSRMGTPDDLVGMCLFLLSDEASWITGQIFNVDGGQIIR  252 (253)
T ss_dssp             ----------CCHHHHHHHHHHSGGGTTCCSCEEEC-------
T ss_pred             ccCCCCCCCCHHHHHHHHHHHcCccccCCCCCEEEECCCeecC
Confidence            3456778889999999999654322 34589999999998763

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=100.00  E-value=3.8e-42  Score=308.78  Aligned_cols=232  Identities=16%  Similarity=0.116  Sum_probs=184.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.  +.++.++++|++|+++++++++++.+ 
T Consensus         4 ~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~-   80 (252)
T 3h7a_A            4 TPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAA--GGRIVARSLDARNEDEVTAFLNAADA-   80 (252)
T ss_dssp             -CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECcCCCHHHHHHHHHHHHh-
Confidence            467999999999999999999999999999999999999999999999876  56899999999999999999999987 


Q ss_pred             HhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                           . +++|+||||||+..  +..+.+.+++++++++|+.|+++++++++|.|++++ .|+||++||.++.       
T Consensus        81 -----~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~-------  146 (252)
T 3h7a_A           81 -----H-APLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHG-QGKIFFTGATASL-------  146 (252)
T ss_dssp             -----H-SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGT-------
T ss_pred             -----h-CCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHHc-------
Confidence                 5 78999999999864  345789999999999999999999999999998876 6899999999988       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEE-EEecCCcccCCccccchhHHHHHHHHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSV-IAADPGVVKTNIMREVPSFLSLMAFTVLK  292 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v-~~v~PG~v~T~~~~~~~~~~~~~~~~~~~  292 (365)
                                   .+.++...|++||+|+++|+++|+.|++   +.||+| |+|+||+|+|++.+....... .......
T Consensus       147 -------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gi~v~n~v~PG~v~T~~~~~~~~~~~-~~~~~~~  209 (252)
T 3h7a_A          147 -------------RGGSGFAAFASAKFGLRAVAQSMARELM---PKNIHVAHLIIDSGVDTAWVRERREQMF-GKDALAN  209 (252)
T ss_dssp             -------------CCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEEC------------------------
T ss_pred             -------------CCCCCCccHHHHHHHHHHHHHHHHHHhh---hcCCEEEEEecCCccCChhhhccchhhh-hhhhhcC
Confidence                         7888999999999999999999999998   789999 999999999999876533221 1112223


Q ss_pred             HhcCCCCHHHHHHHHHHHhcCCC-CCcccEE
Q 017812          293 LLGLLQSPEKGINSVLDAALAPP-ETSGVYF  322 (365)
Q Consensus       293 ~~~~~~~p~e~A~~i~~~~l~~~-~~~G~~~  322 (365)
                      |.+ +.+|+|+|+.+++++..+. ...|+..
T Consensus       210 ~~~-~~~pedvA~~~~~l~s~~~~~~~~~i~  239 (252)
T 3h7a_A          210 PDL-LMPPAAVAGAYWQLYQQPKSAWTFEME  239 (252)
T ss_dssp             -----CCHHHHHHHHHHHHHCCGGGBCSEEE
T ss_pred             Ccc-CCCHHHHHHHHHHHHhCchhcceeeEE
Confidence            454 7899999999996654332 2234443

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=100.00  E-value=2.7e-42  Score=308.70  Aligned_cols=240  Identities=23%  Similarity=0.307  Sum_probs=204.6

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEec-CchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGR-SSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      +++|+++||||++|||+++|++|+++|++|++++| ++++++++.+++...  +.++.++++|++|+++++++++++.+ 
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~-   78 (246)
T 2uvd_A            2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKL--GSDAIAVRADVANAEDVTNMVKQTVD-   78 (246)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHH-
Confidence            57899999999999999999999999999999999 888888888888665  45788999999999999999999988 


Q ss_pred             HhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                           .++++|+||||||+..  +..+.+.+++++++++|+.|+++++++++|.|++++ .|+||++||.++.       
T Consensus        79 -----~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~-------  145 (246)
T 2uvd_A           79 -----VFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQR-HGRIVNIASVVGV-------  145 (246)
T ss_dssp             -----HHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHH-------
T ss_pred             -----HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECCHHhc-------
Confidence                 4578999999999863  345778999999999999999999999999998765 6899999999887       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  293 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  293 (365)
                                   .+.++...|++||++++.|+++++.|++   +.||+||+|+||+++|++.+....... .......|
T Consensus       146 -------------~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~-~~~~~~~p  208 (246)
T 2uvd_A          146 -------------TGNPGQANYVAAKAGVIGLTKTSAKELA---SRNITVNAIAPGFIATDMTDVLDENIK-AEMLKLIP  208 (246)
T ss_dssp             -------------HCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBGGGCSSCCCTTHH-HHHHHTCT
T ss_pred             -------------CCCCCCchHHHHHHHHHHHHHHHHHHhh---hcCeEEEEEEeccccCcchhhcCHHHH-HHHHhcCC
Confidence                         6677889999999999999999999998   789999999999999999765432211 11222246


Q ss_pred             hcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017812          294 LGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  329 (365)
Q Consensus       294 ~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~  329 (365)
                      ++++.+|+|+|+.+++++... ...+|+.+..++|..
T Consensus       209 ~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~~  245 (246)
T 2uvd_A          209 AAQFGEAQDIANAVTFFASDQSKYITGQTLNVDGGMV  245 (246)
T ss_dssp             TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSC
T ss_pred             CCCCcCHHHHHHHHHHHcCchhcCCCCCEEEECcCcc
Confidence            678899999999999655322 246899999888853

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=100.00  E-value=2.1e-42  Score=312.32  Aligned_cols=240  Identities=22%  Similarity=0.258  Sum_probs=204.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.++++++.+++.+.  +.++.++++|++|+++++++++++.+ 
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~-   80 (262)
T 1zem_A            4 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK--GVEARSYVCDVTSEEAVIGTVDSVVR-   80 (262)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT--TSCEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHH-
Confidence            478999999999999999999999999999999999999988888888665  45789999999999999999999988 


Q ss_pred             HhccCCCCCeeEEEecCCcc---cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017812          136 LLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~---~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~  212 (365)
                           .++++|+||||||+.   .+..+.+.++|++++++|+.|+++++++++|.|.+++ .|+||++||.++.      
T Consensus        81 -----~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~------  148 (262)
T 1zem_A           81 -----DFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQN-YGRIVNTASMAGV------  148 (262)
T ss_dssp             -----HHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHH------
T ss_pred             -----HhCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhc------
Confidence                 457899999999976   3445778999999999999999999999999998765 6899999999988      


Q ss_pred             CCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc-------------
Q 017812          213 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV-------------  279 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~-------------  279 (365)
                                    .+.++...|++||++++.|+++++.|++   +.||+||+|+||+++|++....             
T Consensus       149 --------------~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~  211 (262)
T 1zem_A          149 --------------KGPPNMAAYGTSKGAIIALTETAALDLA---PYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYF  211 (262)
T ss_dssp             --------------SCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTS
T ss_pred             --------------cCCCCCchHHHHHHHHHHHHHHHHHHHH---hhCeEEEEEecCCcCcchhhhhccchhhhcccccc
Confidence                          6778889999999999999999999998   7899999999999999986542             


Q ss_pred             h-hHH-HHHHHHHHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCC
Q 017812          280 P-SFL-SLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKG  327 (365)
Q Consensus       280 ~-~~~-~~~~~~~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g  327 (365)
                      + ... .........|++|+.+|+|+|+.+++++... ...+|+.+..|+|
T Consensus       212 ~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG  262 (262)
T 1zem_A          212 STDPKVVAQQMIGSVPMRRYGDINEIPGVVAFLLGDDSSFMTGVNLPIAGG  262 (262)
T ss_dssp             CSSHHHHHHHHHHTSTTSSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred             ccCHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCcCCcEEecCCC
Confidence            1 011 1111222347788999999999999655332 3568999988876

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=100.00  E-value=2e-42  Score=317.07  Aligned_cols=243  Identities=19%  Similarity=0.196  Sum_probs=202.8

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHH-HHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHH
Q 017812           54 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLS-ETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  132 (365)
Q Consensus        54 ~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~-~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~  132 (365)
                      ..+++||++|||||++|||+++|++|+++|++|++++|+.+... ++.+.+.+.  +.++.++++|++|+++++++++++
T Consensus        42 ~~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~  119 (291)
T 3ijr_A           42 SEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKE--GVKCVLLPGDLSDEQHCKDIVQET  119 (291)
T ss_dssp             CSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTT--TCCEEEEESCTTSHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHH
Confidence            34689999999999999999999999999999999999987544 444444433  568899999999999999999999


Q ss_pred             HHHHhccCCCCCeeEEEecCCccc---CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccc
Q 017812          133 QQWLLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVF  209 (365)
Q Consensus       133 ~~~~~~~~~~~~id~lv~nAG~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~  209 (365)
                      .+      .++++|+||||||+..   +..+.+.++|++++++|+.|+++++++++|+|++   .|+||++||.++.   
T Consensus       120 ~~------~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~---~g~iv~isS~~~~---  187 (291)
T 3ijr_A          120 VR------QLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQ---GDVIINTASIVAY---  187 (291)
T ss_dssp             HH------HHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCT---TCEEEEECCTHHH---
T ss_pred             HH------HcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh---CCEEEEEechHhc---
Confidence            88      4578999999999863   3456799999999999999999999999999965   4799999999988   


Q ss_pred             cccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHH
Q 017812          210 NAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFT  289 (365)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~  289 (365)
                                       .+.++...|++||+|+++|+++++.|++   +.||+||+|+||+|+|++..............
T Consensus       188 -----------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~  247 (291)
T 3ijr_A          188 -----------------EGNETLIDYSATKGAIVAFTRSLSQSLV---QKGIRVNGVAPGPIWTPLIPSSFDEKKVSQFG  247 (291)
T ss_dssp             -----------------HCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEECSBCSTHHHHHSCHHHHHHTT
T ss_pred             -----------------CCCCCChhHHHHHHHHHHHHHHHHHHHh---hcCEEEEEEeeCCCcCCcccccCCHHHHHHHH
Confidence                             6778889999999999999999999998   78999999999999999875422211112222


Q ss_pred             HHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017812          290 VLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  330 (365)
Q Consensus       290 ~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~  330 (365)
                      ...|++|+.+|+|+|+++++++... ...+|+.+.+|+|..+
T Consensus       248 ~~~p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~~  289 (291)
T 3ijr_A          248 SNVPMQRPGQPYELAPAYVYLASSDSSYVTGQMIHVNGGVIV  289 (291)
T ss_dssp             TTSTTSSCBCGGGTHHHHHHHHSGGGTTCCSCEEEESSSCCC
T ss_pred             ccCCCCCCcCHHHHHHHHHHHhCCccCCCcCCEEEECCCccc
Confidence            2346788999999999999554322 3568999999998765

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=7.4e-43  Score=313.02  Aligned_cols=236  Identities=22%  Similarity=0.289  Sum_probs=197.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCC-CceEEEEecCCChhhHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKD-ARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+..++ .++.++++|++|.++++++++++.+
T Consensus         4 ~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   83 (250)
T 3nyw_A            4 EKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQ   83 (250)
T ss_dssp             -CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHH
Confidence            367999999999999999999999999999999999999999999999887544 6889999999999999999999988


Q ss_pred             HHhccCCCCCeeEEEecCCcccC-CCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          135 WLLDSDMHSSIQLLINNAGILAT-SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~~-~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                            .++++|+||||||+... ..+.+.++|++++++|+.|+++++++++|.|++++ .|+||++||.++.       
T Consensus        84 ------~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~-------  149 (250)
T 3nyw_A           84 ------KYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQK-NGYIFNVASRAAK-------  149 (250)
T ss_dssp             ------HHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC-----------
T ss_pred             ------hcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEEccHHhc-------
Confidence                  45889999999998632 22678899999999999999999999999998766 6999999999988       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  293 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  293 (365)
                                   .+.++...|++||+|+++|+++++.|++   +.||+||+|+||+|+|++.+.....         .+
T Consensus       150 -------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gi~vn~v~PG~v~T~~~~~~~~~---------~~  204 (250)
T 3nyw_A          150 -------------YGFADGGIYGSTKFALLGLAESLYRELA---PLGIRVTTLCPGWVNTDMAKKAGTP---------FK  204 (250)
T ss_dssp             ----------------CCTTHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEESSBCSHHHHHTTCC---------SC
T ss_pred             -------------CCCCCCcchHHHHHHHHHHHHHHHHHhh---hcCcEEEEEecCcccCchhhhcCCC---------cc
Confidence                         5556688999999999999999999998   7899999999999999987643221         13


Q ss_pred             hcCCCCHHHHHHHHHHHhcCCC--CCcccEEeCCCCccc
Q 017812          294 LGLLQSPEKGINSVLDAALAPP--ETSGVYFFGGKGRTV  330 (365)
Q Consensus       294 ~~~~~~p~e~A~~i~~~~l~~~--~~~G~~~~~~~g~~~  330 (365)
                      .+++.+|+|+|+.+++++..+.  ..+|..+..|+|+..
T Consensus       205 ~~~~~~p~dva~~v~~l~s~~~~~~~~~~~i~vd~~~~~  243 (250)
T 3nyw_A          205 DEEMIQPDDLLNTIRCLLNLSENVCIKDIVFEMKKSIIE  243 (250)
T ss_dssp             GGGSBCHHHHHHHHHHHHTSCTTEECCEEEEEEHHHHHC
T ss_pred             cccCCCHHHHHHHHHHHHcCCCceEeeEEEEEeeccccc
Confidence            4567899999999996554433  245666777766654

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.2e-42  Score=317.63  Aligned_cols=245  Identities=21%  Similarity=0.277  Sum_probs=206.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCC---EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGF---HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  132 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~---~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~  132 (365)
                      +++||++|||||++|||+++|++|+++|+   +|++++|+.++++++.+++...+++.++.++++|++|+++++++++++
T Consensus        30 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~  109 (287)
T 3rku_A           30 RLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENL  109 (287)
T ss_dssp             HHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTS
T ss_pred             hcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence            47899999999999999999999999998   999999999999999999988777788999999999999999999988


Q ss_pred             HHHHhccCCCCCeeEEEecCCccc---CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccc
Q 017812          133 QQWLLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVF  209 (365)
Q Consensus       133 ~~~~~~~~~~~~id~lv~nAG~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~  209 (365)
                      .+      .++++|+||||||+..   +..+.+.++|++++++|+.|+++++++++|.|++++ .|+||++||.++.   
T Consensus       110 ~~------~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~---  179 (287)
T 3rku_A          110 PQ------EFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKN-SGDIVNLGSIAGR---  179 (287)
T ss_dssp             CG------GGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGT---
T ss_pred             HH------hcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEEECChhhc---
Confidence            77      5689999999999863   455779999999999999999999999999998765 6999999999998   


Q ss_pred             cccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHH
Q 017812          210 NAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFT  289 (365)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~  289 (365)
                                       .+.++...|++||+|+++|+++++.|++   ++||+||+|+||+|+|++.......... ...
T Consensus       180 -----------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gIrvn~v~PG~v~T~~~~~~~~~~~~-~~~  238 (287)
T 3rku_A          180 -----------------DAYPTGSIYCASKFAVGAFTDSLRKELI---NTKIRVILIAPGLVETEFSLVRYRGNEE-QAK  238 (287)
T ss_dssp             -----------------SCCTTCHHHHHHHHHHHHHHHHHHHHTT---TSSCEEEEEEESCEESSHHHHHTTTCHH-HHH
T ss_pred             -----------------CCCCCCchHHHHHHHHHHHHHHHHHHhh---hcCCEEEEEeCCcCcCccccccccCcHH-HHH
Confidence                             7888899999999999999999999998   8999999999999999986421110000 001


Q ss_pred             HHHHhcCCCCHHHHHHHHHHHhcCCC-CCcccEEeCCCCcccc
Q 017812          290 VLKLLGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKGRTVN  331 (365)
Q Consensus       290 ~~~~~~~~~~p~e~A~~i~~~~l~~~-~~~G~~~~~~~g~~~~  331 (365)
                      .........+|+|+|+++++++.... ..+|+.+..++|++..
T Consensus       239 ~~~~~~~p~~pedvA~~v~~l~s~~~~~i~g~~i~v~~g~~~p  281 (287)
T 3rku_A          239 NVYKDTTPLMADDVADLIVYATSRKQNTVIADTLIFPTNQASP  281 (287)
T ss_dssp             HHHTTSCCEEHHHHHHHHHHHHTSCTTEEEEEEEEEETTEEET
T ss_pred             HhhcccCCCCHHHHHHHHHHHhCCCCCeEecceEEeeCCCCCC
Confidence            11112234589999999995554332 3468888888887753

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=2.8e-42  Score=319.85  Aligned_cols=244  Identities=23%  Similarity=0.288  Sum_probs=203.7

Q ss_pred             CCCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecC------------chhHHHHHHHHHhhcCCCceEEEEecCC
Q 017812           53 PITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRS------------SHLLSETMADITSRNKDARLEAFQVDLS  120 (365)
Q Consensus        53 ~~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~------------~~~~~~~~~~l~~~~~~~~~~~~~~Dls  120 (365)
                      ++.+++||++|||||++|||+++|++|+++|++|++++|+            .++++++.+++.+.  +.++.++++|++
T Consensus        40 ~m~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~  117 (317)
T 3oec_A           40 RMNRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQ--GRRIIARQADVR  117 (317)
T ss_dssp             --CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHT--TCCEEEEECCTT
T ss_pred             hhhccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhc--CCeEEEEECCCC
Confidence            4567899999999999999999999999999999999886            66777777777665  568899999999


Q ss_pred             ChhhHHHHHHHHHHHHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEE
Q 017812          121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIV  198 (365)
Q Consensus       121 ~~~~v~~~~~~~~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV  198 (365)
                      |+++++++++++.+      .+++||+||||||+..  +..+.+.++|++++++|+.|+++++++++|.|++++..|+||
T Consensus       118 d~~~v~~~~~~~~~------~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv  191 (317)
T 3oec_A          118 DLASLQAVVDEALA------EFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVI  191 (317)
T ss_dssp             CHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEE
T ss_pred             CHHHHHHHHHHHHH------HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEE
Confidence            99999999999988      4588999999999874  456789999999999999999999999999998875468999


Q ss_pred             EEcCCcccccccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcccc
Q 017812          199 NVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE  278 (365)
Q Consensus       199 ~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~  278 (365)
                      ++||.++.                    .+.++...|++||+|+++|+++|+.|++   +.||+||+|+||+|+|++...
T Consensus       192 ~isS~~~~--------------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gI~vn~v~PG~v~T~~~~~  248 (317)
T 3oec_A          192 FVSSTVGL--------------------RGAPGQSHYAASKHGVQGLMLSLANEVG---RHNIRVNSVNPGAVNTEMALN  248 (317)
T ss_dssp             EECCGGGS--------------------SCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBSSHHHHC
T ss_pred             EECcHHhc--------------------CCCCCCcchHHHHHHHHHHHHHHHHHHh---hcCeEEEEEecCcccCccccc
Confidence            99999988                    7888899999999999999999999998   789999999999999998643


Q ss_pred             chhH------------HHHHHH---HHHHHhcCCCCHHHHHHHHHHHhcCCC---CCcccEEeCCCCccc
Q 017812          279 VPSF------------LSLMAF---TVLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRTV  330 (365)
Q Consensus       279 ~~~~------------~~~~~~---~~~~~~~~~~~p~e~A~~i~~~~l~~~---~~~G~~~~~~~g~~~  330 (365)
                      ....            ......   ....| +++.+|+|+|++++  +|.++   ..+|+.+.+|+|...
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~pedvA~av~--fL~s~~a~~itG~~i~vdGG~~~  315 (317)
T 3oec_A          249 EKLLKMFLPHLENPTREDAAELFSQLTLLP-IPWVEPEDVSNAVA--WLASDEARYIHGAAIPVDGGQLA  315 (317)
T ss_dssp             HHHHHHHCTTCSSCCHHHHHHHHTTTCSSS-SSSBCHHHHHHHHH--HHTSGGGTTCCSCEEEESTTGGG
T ss_pred             hhhhhhhhhhccccchhHHHHHHhhhccCC-CCCCCHHHHHHHHH--HHcCCcccCCCCCEEEECcchhh
Confidence            1100            000000   00011 46779999999999  45544   468999999999765

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=5.2e-42  Score=308.53  Aligned_cols=245  Identities=21%  Similarity=0.247  Sum_probs=207.5

Q ss_pred             CCCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEe-cCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHH
Q 017812           53 PITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVG-RSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDS  131 (365)
Q Consensus        53 ~~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~  131 (365)
                      +..+.++|++|||||++|||+++|++|+++|++|++++ |+.++.++..+++.+.  +.++.++++|++|.+++++++++
T Consensus         7 ~~~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~   84 (256)
T 3ezl_A            7 HHMVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKAL--GFDFYASEGNVGDWDSTKQAFDK   84 (256)
T ss_dssp             ------CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHT--TCCCEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCeeEEEecCCCCHHHHHHHHHH
Confidence            33457899999999999999999999999999999988 7777788888887665  46789999999999999999999


Q ss_pred             HHHHHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccc
Q 017812          132 LQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVF  209 (365)
Q Consensus       132 ~~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~  209 (365)
                      +.+      .++++|+||||||+..  +..+.+.+++++++++|+.|+++++++++|.|++++ .|+||++||.++.   
T Consensus        85 ~~~------~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~---  154 (256)
T 3ezl_A           85 VKA------EVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERG-WGRIINISSVNGQ---  154 (256)
T ss_dssp             HHH------HTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCCCGG---
T ss_pred             HHH------hcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchhhc---
Confidence            988      5689999999999874  445789999999999999999999999999998876 6999999999988   


Q ss_pred             cccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHH
Q 017812          210 NAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFT  289 (365)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~  289 (365)
                                       .+.++...|++||+|+++|+++++.|++   ..||+|++|+||+|+|++.+...+... ....
T Consensus       155 -----------------~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~v~~v~PG~v~t~~~~~~~~~~~-~~~~  213 (256)
T 3ezl_A          155 -----------------KGQFGQTNYSTAKAGIHGFTMSLAQEVA---TKGVTVNTVSPGYIGTDMVKAIRPDVL-EKIV  213 (256)
T ss_dssp             -----------------GSCSCCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCCHHHHTSCHHHH-HHHH
T ss_pred             -----------------cCCCCCcccHHHHHHHHHHHHHHHHHHH---HhCCEEEEEEECcccCccccccCHHHH-HHHH
Confidence                             7788899999999999999999999998   789999999999999999877644322 2223


Q ss_pred             HHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017812          290 VLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  330 (365)
Q Consensus       290 ~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~  330 (365)
                      ...+.+++.+|+|+|+.+++++... ...+|+.+..++|..+
T Consensus       214 ~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~vdgG~~~  255 (256)
T 3ezl_A          214 ATIPVRRLGSPDEIGSIVAWLASEESGFSTGADFSLNGGLHM  255 (256)
T ss_dssp             HHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSCC
T ss_pred             hcCCCCCCcCHHHHHHHHHHHhCCcccCCcCcEEEECCCEeC
Confidence            3457788999999999999655322 3578999999998754

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=100.00  E-value=8.9e-42  Score=307.81  Aligned_cols=243  Identities=21%  Similarity=0.287  Sum_probs=206.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.++++++.+++...  +.++.++++|++|+++++++++++.+ 
T Consensus         6 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~-   82 (260)
T 2ae2_A            6 NLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK--GFKVEASVCDLSSRSERQELMNTVAN-   82 (260)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHH-
Confidence            478999999999999999999999999999999999999988888888665  45789999999999999999999988 


Q ss_pred             HhccCCC-CCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017812          136 LLDSDMH-SSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       136 ~~~~~~~-~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~  212 (365)
                           .+ +++|+||||||+..  +..+.+.+++++++++|+.|+++++++++|+|++++ .|+||++||.++.      
T Consensus        83 -----~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~------  150 (260)
T 2ae2_A           83 -----HFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASE-RGNVVFISSVSGA------  150 (260)
T ss_dssp             -----HTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTS-SEEEEEECCGGGT------
T ss_pred             -----HcCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhc------
Confidence                 55 78999999999863  345778999999999999999999999999998765 6899999999987      


Q ss_pred             CCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHH-HH---HH
Q 017812          213 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLS-LM---AF  288 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~-~~---~~  288 (365)
                                    .+.++...|++||++++.|+++++.|++   +.||+||+|+||+++|++.+....... ..   ..
T Consensus       151 --------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~  213 (260)
T 2ae2_A          151 --------------LAVPYEAVYGATKGAMDQLTRCLAFEWA---KDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKL  213 (260)
T ss_dssp             --------------SCCTTCHHHHHHHHHHHHHHHHHHHHTG---GGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHH
T ss_pred             --------------cCCCCcchHHHHHHHHHHHHHHHHHHHh---hcCcEEEEEecCCCCCcchhhhccChhhHHHHHHH
Confidence                          6778889999999999999999999998   789999999999999998654211110 11   11


Q ss_pred             HHHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017812          289 TVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  330 (365)
Q Consensus       289 ~~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~  330 (365)
                      ....|++++.+|+|+|+.+++++... ...+|+.+..++|...
T Consensus       214 ~~~~~~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~~  256 (260)
T 2ae2_A          214 IDRCALRRMGEPKELAAMVAFLCFPAASYVTGQIIYVDGGLMA  256 (260)
T ss_dssp             HHTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HhcCCCCCCCCHHHHHHHHHHHcCccccCCCCCEEEECCCccc
Confidence            22236678899999999999655322 2468999999998765

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=1.2e-42  Score=317.65  Aligned_cols=233  Identities=14%  Similarity=0.196  Sum_probs=200.0

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCch-------hHHHHHHHHHhhcCCCceEEEEecCCChhhHHH
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH-------LLSETMADITSRNKDARLEAFQVDLSSFQSVLK  127 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~-------~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~  127 (365)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+       .++++.+++...  +.++.++++|++|++++++
T Consensus         5 m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~   82 (285)
T 3sc4_A            5 MSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEA--GGQALPIVGDIRDGDAVAA   82 (285)
T ss_dssp             -CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHH--TSEEEEEECCTTSHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHH
Confidence            3578999999999999999999999999999999999987       577777777766  5689999999999999999


Q ss_pred             HHHHHHHHHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017812          128 FKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  205 (365)
Q Consensus       128 ~~~~~~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~  205 (365)
                      +++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.|+++++++++|+|++++ .|+||++||.++
T Consensus        83 ~~~~~~~------~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~  155 (285)
T 3sc4_A           83 AVAKTVE------QFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRD-NPHILTLSPPIR  155 (285)
T ss_dssp             HHHHHHH------HHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSS-SCEEEECCCCCC
T ss_pred             HHHHHHH------HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECChhh
Confidence            9999998      4578999999999873  455789999999999999999999999999998876 799999999988


Q ss_pred             cccccccCCCccccccccccCCCC-ChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCC-cccCCccccchhHH
Q 017812          206 RNVFNAQVNNETITGKFFLRSKCY-PCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG-VVKTNIMREVPSFL  283 (365)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG-~v~T~~~~~~~~~~  283 (365)
                      .                    .+. ++...|++||+|+++|+++|+.|++   +.||+||+|+|| +++|++.+..... 
T Consensus       156 ~--------------------~~~~~~~~~Y~asKaal~~~~~~la~e~~---~~gI~vn~v~PG~~v~t~~~~~~~~~-  211 (285)
T 3sc4_A          156 L--------------------EPKWLRPTPYMMAKYGMTLCALGIAEELR---DAGIASNTLWPRTTVATAAVQNLLGG-  211 (285)
T ss_dssp             C--------------------SGGGSCSHHHHHHHHHHHHHHHHHHHHTG---GGTCEEEEEECSSCBCCHHHHHHHTS-
T ss_pred             c--------------------cCCCCCCchHHHHHHHHHHHHHHHHHHhc---ccCcEEEEEeCCCccccHHHHhhccc-
Confidence            7                    443 6678999999999999999999998   889999999999 6899886542211 


Q ss_pred             HHHHHHHHHHhcCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCC
Q 017812          284 SLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKG  327 (365)
Q Consensus       284 ~~~~~~~~~~~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g  327 (365)
                             ..+++++.+|||+|+.+++++......+|+.+..++|
T Consensus       212 -------~~~~~r~~~pedvA~~~~~l~s~~~~~tG~~i~~dgg  248 (285)
T 3sc4_A          212 -------DEAMARSRKPEVYADAAYVVLNKPSSYTGNTLLCEDV  248 (285)
T ss_dssp             -------CCCCTTCBCTHHHHHHHHHHHTSCTTCCSCEEEHHHH
T ss_pred             -------cccccCCCCHHHHHHHHHHHhCCcccccceEEEEcCc
Confidence                   1245688899999999996654444678988876654

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=100.00  E-value=9.9e-42  Score=307.51  Aligned_cols=244  Identities=21%  Similarity=0.279  Sum_probs=206.8

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.++++++.+++...  +.++.++.+|++|.++++++++++.+
T Consensus        10 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   87 (260)
T 2zat_A           10 KPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGE--GLSVTGTVCHVGKAEDRERLVAMAVN   87 (260)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999999888888888665  45788999999999999999999988


Q ss_pred             HHhccCCCCCeeEEEecCCcc---cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017812          135 WLLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  211 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~---~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~  211 (365)
                            .++++|+||||||+.   .+..+.+.++|++++++|+.|+++++++++|+|++++ .|+||++||.+++     
T Consensus        88 ------~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~-----  155 (260)
T 2zat_A           88 ------LHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRG-GGSVLIVSSVGAY-----  155 (260)
T ss_dssp             ------HHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGT-----
T ss_pred             ------HcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEechhhc-----
Confidence                  457899999999985   3445778999999999999999999999999998765 6899999999988     


Q ss_pred             cCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccch-hHHHHHHHHH
Q 017812          212 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP-SFLSLMAFTV  290 (365)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~-~~~~~~~~~~  290 (365)
                                     .+.++...|++||++++.|+++++.|++   +.||+||+|+||+++|++.+... ..........
T Consensus       156 ---------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~  217 (260)
T 2zat_A          156 ---------------HPFPNLGPYNVSKTALLGLTKNLAVELA---PRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKE  217 (260)
T ss_dssp             ---------------SCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCSSTTHHHHSSHHHHHHHHH
T ss_pred             ---------------CCCCCchhHHHHHHHHHHHHHHHHHHhc---ccCeEEEEEEECcccCccchhcccChHHHHHHHh
Confidence                           6778889999999999999999999998   78999999999999999875321 1111112223


Q ss_pred             HHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017812          291 LKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  330 (365)
Q Consensus       291 ~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~  330 (365)
                      ..|++++.+|+|+|+.+++++... ...+|+.+..++|...
T Consensus       218 ~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~  258 (260)
T 2zat_A          218 SLRIRRLGNPEDCAGIVSFLCSEDASYITGETVVVGGGTAS  258 (260)
T ss_dssp             HHTCSSCBCGGGGHHHHHHHTSGGGTTCCSCEEEESTTCCC
T ss_pred             cCCCCCCCCHHHHHHHHHHHcCcccCCccCCEEEECCCccc
Confidence            346778999999999999544322 2458999999998765

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=100.00  E-value=1.4e-41  Score=308.16  Aligned_cols=252  Identities=16%  Similarity=0.116  Sum_probs=205.1

Q ss_pred             CCCCCCCCEEEEecCC--ChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHH
Q 017812           53 PITGIKRPVCIVTGAT--SGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKD  130 (365)
Q Consensus        53 ~~~~~~~k~vlITGas--sGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~  130 (365)
                      +..++++|++|||||+  +|||+++|++|+++|++|++++|+... .+..+++.+..+  ++.++++|++|+++++++++
T Consensus         8 ~~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~   84 (271)
T 3ek2_A            8 HMGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRF-KDRITEFAAEFG--SELVFPCDVADDAQIDALFA   84 (271)
T ss_dssp             -CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGG-HHHHHHHHHHTT--CCCEEECCTTCHHHHHHHHH
T ss_pred             CccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhh-HHHHHHHHHHcC--CcEEEECCCCCHHHHHHHHH
Confidence            4456889999999999  999999999999999999999999544 344555555432  47899999999999999999


Q ss_pred             HHHHHHhccCCCCCeeEEEecCCccc------CCCC-CCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCC
Q 017812          131 SLQQWLLDSDMHSSIQLLINNAGILA------TSSR-LTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSF  203 (365)
Q Consensus       131 ~~~~~~~~~~~~~~id~lv~nAG~~~------~~~~-~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~  203 (365)
                      ++.+      .++++|+||||||+..      +..+ .+.+++++++++|+.|+++++++++|+|++   .|+||++||.
T Consensus        85 ~~~~------~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~g~iv~isS~  155 (271)
T 3ek2_A           85 SLKT------HWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSD---DASLLTLSYL  155 (271)
T ss_dssp             HHHH------HCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEE---EEEEEEEECG
T ss_pred             HHHH------HcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhcc---CceEEEEecc
Confidence            9998      5689999999999863      2334 789999999999999999999999999975   4899999999


Q ss_pred             cccccccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHH
Q 017812          204 THRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFL  283 (365)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~  283 (365)
                      ++.                    .+.++...|++||+|+++|+++++.|++   +.||+|++|+||+|+|++.+......
T Consensus       156 ~~~--------------------~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gi~v~~v~PG~v~T~~~~~~~~~~  212 (271)
T 3ek2_A          156 GAE--------------------RAIPNYNTMGLAKAALEASVRYLAVSLG---AKGVRVNAISAGPIKTLAASGIKSFG  212 (271)
T ss_dssp             GGT--------------------SBCTTTTHHHHHHHHHHHHHHHHHHHHH---TTTCEEEEEEECCC-----CCCHHHH
T ss_pred             ccc--------------------cCCCCccchhHHHHHHHHHHHHHHHHHH---hcCcEEEEEecCcccchhhhcccchH
Confidence            988                    7888899999999999999999999998   78999999999999999988765432


Q ss_pred             HH-HHHHHHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccccCCcccCCH
Q 017812          284 SL-MAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVNSSALSFNS  339 (365)
Q Consensus       284 ~~-~~~~~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~~~~~~~~d~  339 (365)
                      .. .......|++++.+|+|+|+.+++++... ...+|+.+..|+|........+..+
T Consensus       213 ~~~~~~~~~~~~~~~~~pedva~~i~~l~s~~~~~~tG~~i~vdgG~~~~~~~~~~~~  270 (271)
T 3ek2_A          213 KILDFVESNSPLKRNVTIEQVGNAGAFLLSDLASGVTAEVMHVDSGFNAVVGGMAGLE  270 (271)
T ss_dssp             HHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSEEEEESTTGGGBCCCC----
T ss_pred             HHHHHHHhcCCcCCCCCHHHHHHHHHHHcCcccCCeeeeEEEECCCeeeehhhhhhcc
Confidence            22 22334457788999999999999655432 4578999999999998777665544

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=100.00  E-value=5.6e-42  Score=309.12  Aligned_cols=242  Identities=23%  Similarity=0.256  Sum_probs=199.3

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchh-HHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHL-LSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      +++|+++||||++|||+++|++|+++|++|++++|+.++ ++++.+++.+.. +.++.++++|++|+++++++++++.+ 
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~-   79 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQH-GVKVLYDGADLSKGEAVRGLVDNAVR-   79 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHH-TSCEEEECCCTTSHHHHHHHHHHHHH-
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhcc-CCcEEEEECCCCCHHHHHHHHHHHHH-
Confidence            578999999999999999999999999999999999988 888888876542 34688999999999999999999988 


Q ss_pred             HhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                           .++++|+||||||+..  +..+.+.+++++++++|+.|+++++++++|+|++++ .|+||++||.++.       
T Consensus        80 -----~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~-------  146 (260)
T 1x1t_A           80 -----QMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQG-FGRIINIASAHGL-------  146 (260)
T ss_dssp             -----HHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT-------
T ss_pred             -----hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEECcHHhC-------
Confidence                 4578999999999864  345678999999999999999999999999998765 6899999999988       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH---------HH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF---------LS  284 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~---------~~  284 (365)
                                   .+.++...|++||++++.|+++++.|++   +.||+||+|+||+|+|++.+.....         ..
T Consensus       147 -------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~  210 (260)
T 1x1t_A          147 -------------VASANKSAYVAAKHGVVGFTKVTALETA---GQGITANAICPGWVRTPLVEKQISALAEKNGVDQET  210 (260)
T ss_dssp             -------------SCCTTCHHHHHHHHHHHHHHHHHHHHHT---TTTEEEEEEEECCBCC--------------------
T ss_pred             -------------cCCCCCchHHHHHHHHHHHHHHHHHHhc---cCCEEEEEEeecCccCchHHHhhhhhccccCCchHH
Confidence                         6778889999999999999999999998   7899999999999999997643210         00


Q ss_pred             H-HHH-HHHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017812          285 L-MAF-TVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  329 (365)
Q Consensus       285 ~-~~~-~~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~  329 (365)
                      . ... ....|++++.+|+|+|+.+++++... ...+|+.+..++|..
T Consensus       211 ~~~~~~~~~~p~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdgG~~  258 (260)
T 1x1t_A          211 AARELLSEKQPSLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGGWT  258 (260)
T ss_dssp             ----CHHHHCTTCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHhhccCCCCCCcCHHHHHHHHHHHhChhhcCCCCCEEEECCCcc
Confidence            0 011 22246778999999999999655322 356899999998864

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=100.00  E-value=7.9e-42  Score=313.13  Aligned_cols=244  Identities=20%  Similarity=0.199  Sum_probs=202.9

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEe-cCchhHHHHHHHHHhhcCCCceEEEEecCCChh---------
Q 017812           54 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVG-RSSHLLSETMADITSRNKDARLEAFQVDLSSFQ---------  123 (365)
Q Consensus        54 ~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~---------  123 (365)
                      +.++++|++|||||++|||+++|++|+++|++|++++ |+.++++++.+++.... +.++.++++|++|++         
T Consensus         4 m~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~   82 (291)
T 1e7w_A            4 MTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARR-PNSAITVQADLSNVATAPVSGADG   82 (291)
T ss_dssp             ----CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSSSCBCCCC----
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhc-CCeeEEEEeecCCccccccccccc
Confidence            3457899999999999999999999999999999999 99999998888886333 457899999999999         


Q ss_pred             --------hHHHHHHHHHHHHhccCCCCCeeEEEecCCccc--CCCCCC--------------HHHHhHhHHHHhHHHHH
Q 017812          124 --------SVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLT--------------PEGYDQMMSTNYIGAFF  179 (365)
Q Consensus       124 --------~v~~~~~~~~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~--------------~~~~~~~~~vN~~~~~~  179 (365)
                              +++++++++.+      .++++|+||||||+..  +..+.+              .+++++++++|+.|+++
T Consensus        83 ~~~~~~~~~v~~~~~~~~~------~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~  156 (291)
T 1e7w_A           83 SAPVTLFTRCAELVAACYT------HWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYF  156 (291)
T ss_dssp             CCCBCHHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHH
T ss_pred             ccccchHHHHHHHHHHHHH------hcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHH
Confidence                    99999999988      4578999999999863  345667              89999999999999999


Q ss_pred             HHHHHhHhhhcCCC-----CCeEEEEcCCcccccccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhC
Q 017812          180 LTKLLLPLLKNSPV-----PSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLG  254 (365)
Q Consensus       180 l~~~~l~~~~~~~~-----~g~iV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~  254 (365)
                      ++++++|+|++++.     .|+||++||.++.                    .+.++...|++||+|+++|+++++.|++
T Consensus       157 l~~~~~~~m~~~~~~~~~~~g~Iv~isS~~~~--------------------~~~~~~~~Y~asKaa~~~l~~~la~e~~  216 (291)
T 1e7w_A          157 LIKAFAHRVAGTPAKHRGTNYSIINMVDAMTN--------------------QPLLGYTIYTMAKGALEGLTRSAALELA  216 (291)
T ss_dssp             HHHHHHHHHHTSCGGGSCSCEEEEEECCTTTT--------------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             HHHHHHHHHHhcCCCCCCCCcEEEEEechhhc--------------------CCCCCCchhHHHHHHHHHHHHHHHHHHH
Confidence            99999999987541     4899999999988                    7788899999999999999999999998


Q ss_pred             CCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhc-CCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017812          255 LDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLG-LLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  330 (365)
Q Consensus       255 ~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~-~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~  330 (365)
                         +.||+||+|+||+|+|++ + .++. .........|++ ++.+|+|+|+.+++++... ...+|+.+..++|..+
T Consensus       217 ---~~gI~vn~v~PG~v~T~~-~-~~~~-~~~~~~~~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~  288 (291)
T 1e7w_A          217 ---PLQIRVNGVGPGLSVLVD-D-MPPA-VWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL  288 (291)
T ss_dssp             ---GGTEEEEEEEESSBCCGG-G-SCHH-HHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             ---hcCeEEEEEeeCCccCCc-c-CCHH-HHHHHHhhCCCCCCCCCHHHHHHHHHHHhCCcccCccCcEEEECCCccc
Confidence               789999999999999999 5 4211 111122223667 8899999999999655432 3568999999998654

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=100.00  E-value=5e-42  Score=312.87  Aligned_cols=239  Identities=21%  Similarity=0.202  Sum_probs=198.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      +++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++     +.++.++++|++|+++++++++++.+ 
T Consensus         2 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~-   75 (281)
T 3zv4_A            2 KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH-----GGNAVGVVGDVRSLQDQKRAAERCLA-   75 (281)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-----BTTEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             CcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHc-----CCcEEEEEcCCCCHHHHHHHHHHHHH-
Confidence            368999999999999999999999999999999999998887766554     45789999999999999999999988 


Q ss_pred             HhccCCCCCeeEEEecCCcccCC-------CCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccc
Q 017812          136 LLDSDMHSSIQLLINNAGILATS-------SRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNV  208 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~~~-------~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~  208 (365)
                           .++++|+||||||+....       .+.+.++|++++++|+.|+++++++++|+|.+++  |+||++||.++.  
T Consensus        76 -----~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~--g~iv~isS~~~~--  146 (281)
T 3zv4_A           76 -----AFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSR--GSVVFTISNAGF--  146 (281)
T ss_dssp             -----HHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCGGGT--
T ss_pred             -----hcCCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC--CeEEEEecchhc--
Confidence                 457899999999986321       2345678999999999999999999999998764  899999999988  


Q ss_pred             ccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh-------
Q 017812          209 FNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS-------  281 (365)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~-------  281 (365)
                                        .+.++...|++||+|+++|+++++.|++   +. |+||+|+||+|+|++......       
T Consensus       147 ------------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~-Irvn~v~PG~v~T~~~~~~~~~~~~~~~  204 (281)
T 3zv4_A          147 ------------------YPNGGGPLYTATKHAVVGLVRQMAFELA---PH-VRVNGVAPGGMNTDLRGPSSLGLSEQSI  204 (281)
T ss_dssp             ------------------SSSSSCHHHHHHHHHHHHHHHHHHHHHT---TT-SEEEEEEECSSCC--CCCTTCC------
T ss_pred             ------------------cCCCCCchhHHHHHHHHHHHHHHHHHhc---CC-CEEEEEECCcCcCCcccccccccccccc
Confidence                              7888899999999999999999999997   55 999999999999998753210       


Q ss_pred             --HHHHHHHHHHHHhcCCCCHHHHHHHHHHHhcCC--CCCcccEEeCCCCcccc
Q 017812          282 --FLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP--PETSGVYFFGGKGRTVN  331 (365)
Q Consensus       282 --~~~~~~~~~~~~~~~~~~p~e~A~~i~~~~l~~--~~~~G~~~~~~~g~~~~  331 (365)
                        ...........|++|+.+|+|+|+++++++..+  ...+|+.+.+|+|....
T Consensus       205 ~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~~~~~itG~~i~vdGG~~~~  258 (281)
T 3zv4_A          205 SSVPLADMLKSVLPIGRMPALEEYTGAYVFFATRGDSLPATGALLNYDGGMGVR  258 (281)
T ss_dssp             --CCHHHHHHHTCTTSSCCCGGGGSHHHHHHHSTTTSTTCSSCEEEESSSGGGC
T ss_pred             cchhHHHHHHhcCCCCCCCCHHHHHHHHHHhhcccccccccCcEEEECCCCccc
Confidence              001122333457889999999999999655422  24689999999998663

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=100.00  E-value=7.1e-42  Score=308.54  Aligned_cols=243  Identities=22%  Similarity=0.290  Sum_probs=195.4

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++     +.++.++++|++|.++++++++++.+
T Consensus         5 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~   79 (261)
T 3n74_A            5 MSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI-----GDAALAVAADISKEADVDAAVEAALS   79 (261)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-----CCceEEEEecCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999999988888776     55789999999999999999999988


Q ss_pred             HHhccCCCCCeeEEEecCCccc---CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCC---CCCeEEEEcCCccccc
Q 017812          135 WLLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP---VPSRIVNVTSFTHRNV  208 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~---~~g~iV~vsS~~~~~~  208 (365)
                            .++++|+||||||+..   +..+.+.+++++++++|+.|+++++++++|+|++++   ..++||++||.++.  
T Consensus        80 ------~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~--  151 (261)
T 3n74_A           80 ------KFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAG--  151 (261)
T ss_dssp             ------HHSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTT--
T ss_pred             ------hcCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhc--
Confidence                  4578999999999864   334568999999999999999999999999998652   24789999999988  


Q ss_pred             ccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH---HHH
Q 017812          209 FNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF---LSL  285 (365)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~---~~~  285 (365)
                                        .+.++...|++||+|+++|+++++.|++   +.||+|++|+||+++|++.+.....   ...
T Consensus       152 ------------------~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~  210 (261)
T 3n74_A          152 ------------------RPRPNLAWYNATKGWVVSVTKALAIELA---PAKIRVVALNPVAGETPLLTTFMGEDSEEIR  210 (261)
T ss_dssp             ------------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEEC-------------------
T ss_pred             ------------------CCCCCccHHHHHHHHHHHHHHHHHHHhh---hcCcEEEEEecCcccChhhhhhcccCcHHHH
Confidence                              7888899999999999999999999998   7899999999999999998754221   111


Q ss_pred             HHHHHHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcccc
Q 017812          286 MAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVN  331 (365)
Q Consensus       286 ~~~~~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~~  331 (365)
                      .......|++++.+|+|+|+++++++... ...+|+.+..++|..+.
T Consensus       211 ~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~itG~~i~vdgG~~~~  257 (261)
T 3n74_A          211 KKFRDSIPMGRLLKPDDLAEAAAFLCSPQASMITGVALDVDGGRSIG  257 (261)
T ss_dssp             ------CTTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTC-
T ss_pred             HHHhhcCCcCCCcCHHHHHHHHHHHcCCcccCcCCcEEEecCCcccC
Confidence            12233356778999999999999544321 35689999999998763

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=100.00  E-value=2e-42  Score=313.67  Aligned_cols=245  Identities=22%  Similarity=0.257  Sum_probs=202.6

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEe-cCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHH
Q 017812           54 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVG-RSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  132 (365)
Q Consensus        54 ~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~  132 (365)
                      ...+++|+++||||++|||+++|++|+++|++|++++ |+.+..++..+++...  +.++.++.+|++|.++++++++++
T Consensus        20 ~~~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~   97 (269)
T 3gk3_A           20 GSMQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDA--GRDFKAYAVDVADFESCERCAEKV   97 (269)
T ss_dssp             ----CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTT--TCCCEEEECCTTCHHHHHHHHHHH
T ss_pred             hhhhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHH
Confidence            3447899999999999999999999999999999998 5666666666666544  567899999999999999999999


Q ss_pred             HHHHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc
Q 017812          133 QQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN  210 (365)
Q Consensus       133 ~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~  210 (365)
                      .+      .++++|+||||||+..  +..+.+.+++++++++|+.|++.+++.++|.|++++ .|+||++||.++.    
T Consensus        98 ~~------~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~----  166 (269)
T 3gk3_A           98 LA------DFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERR-FGRIVNIGSVNGS----  166 (269)
T ss_dssp             HH------HHSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHH----
T ss_pred             HH------HcCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEeCChhhc----
Confidence            88      4578999999999873  445779999999999999999999999999998765 6899999999988    


Q ss_pred             ccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHH
Q 017812          211 AQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTV  290 (365)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~  290 (365)
                                      .+.++...|++||+|+++|++++++|++   +.||+|++|+||+|+|++.+..+..........
T Consensus       167 ----------------~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~  227 (269)
T 3gk3_A          167 ----------------RGAFGQANYASAKAGIHGFTKTLALETA---KRGITVNTVSPGYLATAMVEAVPQDVLEAKILP  227 (269)
T ss_dssp             ----------------HCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCCTTTTC-------CCSGG
T ss_pred             ----------------cCCCCcchHHHHHHHHHHHHHHHHHHhh---hcCCEEEEEecCcccchhhhhhchhHHHHHhhh
Confidence                            7788899999999999999999999998   789999999999999999876543221111222


Q ss_pred             HHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017812          291 LKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  330 (365)
Q Consensus       291 ~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~  330 (365)
                      ..+++++.+|+|+|+.+++++... ...+|+.+.+|+|..+
T Consensus       228 ~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~  268 (269)
T 3gk3_A          228 QIPVGRLGRPDEVAALIAFLCSDDAGFVTGADLAINGGMHM  268 (269)
T ss_dssp             GCTTSSCBCHHHHHHHHHHHTSTTCTTCCSCEEEESTTSCC
T ss_pred             cCCcCCccCHHHHHHHHHHHhCCCcCCeeCcEEEECCCEeC
Confidence            346678889999999999544332 2468999999998764

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.1e-41  Score=308.97  Aligned_cols=240  Identities=22%  Similarity=0.250  Sum_probs=203.1

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecC-chhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHH
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRS-SHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  133 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~  133 (365)
                      .+++||++|||||++|||+++|++|+++|++|++++++ .++++++.+++.+.  +.++.++++|++|+++++++++++.
T Consensus        27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~  104 (271)
T 3v2g_A           27 ISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQA--GGRAVAIRADNRDAEAIEQAIRETV  104 (271)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHH
Confidence            35889999999999999999999999999999999665 46777888888765  4678999999999999999999998


Q ss_pred             HHHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017812          134 QWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  211 (365)
Q Consensus       134 ~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~  211 (365)
                      +      .++++|+||||||+..  +..+.+.++|++++++|+.|+++++++++|.|++   .|+||++||..+.     
T Consensus       105 ~------~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~---~g~iv~isS~~~~-----  170 (271)
T 3v2g_A          105 E------ALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGD---GGRIITIGSNLAE-----  170 (271)
T ss_dssp             H------HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT---TCEEEEECCGGGT-----
T ss_pred             H------HcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc---CCEEEEEeChhhc-----
Confidence            8      4578999999999863  4457899999999999999999999999999965   4899999998765     


Q ss_pred             cCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHH
Q 017812          212 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVL  291 (365)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~  291 (365)
                                    ..+.++...|++||+|+++|+++++.|++   +.||+||+|+||+|+|++....+....  .....
T Consensus       171 --------------~~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gIrvn~v~PG~v~T~~~~~~~~~~~--~~~~~  231 (271)
T 3v2g_A          171 --------------LVPWPGISLYSASKAALAGLTKGLARDLG---PRGITVNIVHPGSTDTDMNPADGDHAE--AQRER  231 (271)
T ss_dssp             --------------CCCSTTCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEECSBCSSSSCSSCSSHH--HHHHT
T ss_pred             --------------cCCCCCchHHHHHHHHHHHHHHHHHHHhh---hhCeEEEEEecCCCcCCcccccchhHH--HHHhc
Confidence                          03467889999999999999999999998   789999999999999999865433221  22233


Q ss_pred             HHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017812          292 KLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  329 (365)
Q Consensus       292 ~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~  329 (365)
                      .|++|+.+|+|+|+.+++++... ...+|+.+.+|+|..
T Consensus       232 ~~~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~  270 (271)
T 3v2g_A          232 IATGSYGEPQDIAGLVAWLAGPQGKFVTGASLTIDGGAN  270 (271)
T ss_dssp             CTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             CCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEeCcCcc
Confidence            57788999999999999544322 357899999998853

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=100.00  E-value=4.8e-42  Score=311.00  Aligned_cols=238  Identities=21%  Similarity=0.257  Sum_probs=199.3

Q ss_pred             CCCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHH
Q 017812           53 PITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  132 (365)
Q Consensus        53 ~~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~  132 (365)
                      +..+++||+||||||++|||+++|++|+++|++|++++|+.+..            ...+..+++|++|+++++++++++
T Consensus         8 ~~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~------------~~~~~~~~~Dv~~~~~v~~~~~~~   75 (269)
T 3vtz_A            8 HMEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD------------VNVSDHFKIDVTNEEEVKEAVEKT   75 (269)
T ss_dssp             --CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C------------TTSSEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc------------cCceeEEEecCCCHHHHHHHHHHH
Confidence            44568899999999999999999999999999999999987643            125678999999999999999999


Q ss_pred             HHHHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc
Q 017812          133 QQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN  210 (365)
Q Consensus       133 ~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~  210 (365)
                      .+      .++++|+||||||+..  +..+.+.++|++++++|+.|+++++++++|+|++++ .|+||++||.+++    
T Consensus        76 ~~------~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~----  144 (269)
T 3vtz_A           76 TK------KYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIG-HGSIINIASVQSY----  144 (269)
T ss_dssp             HH------HHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT----
T ss_pred             HH------HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhc----
Confidence            88      4578999999999863  445778999999999999999999999999998765 6999999999988    


Q ss_pred             ccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh---------
Q 017812          211 AQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS---------  281 (365)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~---------  281 (365)
                                      .+.++...|++||+|+++|+++++.|++   + +|+||+|+||+|+|++......         
T Consensus       145 ----------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~-~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~  204 (269)
T 3vtz_A          145 ----------------AATKNAAAYVTSKHALLGLTRSVAIDYA---P-KIRCNAVCPGTIMTPMVIKAAKMEVGEDENA  204 (269)
T ss_dssp             ----------------SBCTTCHHHHHHHHHHHHHHHHHHHHHT---T-TEEEEEEEECSBCCHHHHHHHHHHHCCSTTH
T ss_pred             ----------------cCCCCChhHHHHHHHHHHHHHHHHHHhc---C-CCEEEEEEECCCcCcchhhhhhccccccchh
Confidence                            7788899999999999999999999997   5 8999999999999998754311         


Q ss_pred             -HHHHHHHHHHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccccCC
Q 017812          282 -FLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVNSS  333 (365)
Q Consensus       282 -~~~~~~~~~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~~~~  333 (365)
                       ...........|++|+.+|+|+|+++++++... ...+|+.+.+|+|.....+
T Consensus       205 ~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~~~  258 (269)
T 3vtz_A          205 VERKIEEWGRQHPMGRIGRPEEVAEVVAFLASDRSSFITGACLTVDGGLLSKLP  258 (269)
T ss_dssp             HHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGBCC
T ss_pred             hHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCccCCCcCcEEEECCCccccCC
Confidence             111122334457789999999999999554332 3568999999999876543

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=100.00  E-value=8.4e-42  Score=307.98  Aligned_cols=242  Identities=19%  Similarity=0.212  Sum_probs=202.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.++++++.+++....++.++.++++|++|+++++++++++.+ 
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~-   82 (260)
T 2z1n_A            4 GIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARD-   82 (260)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHH-
Confidence            3679999999999999999999999999999999999999888888886543334789999999999999999999988 


Q ss_pred             HhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                           .++ +|+||||||+..  +..+.+.++|++++++|+.|+++++++++|.|++++ .|+||++||.++.       
T Consensus        83 -----~~g-id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~-------  148 (260)
T 2z1n_A           83 -----LGG-ADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKG-WGRMVYIGSVTLL-------  148 (260)
T ss_dssp             -----TTC-CSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT-------
T ss_pred             -----hcC-CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECchhhc-------
Confidence                 667 999999999863  345778999999999999999999999999998765 6899999999988       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccc----------cchhHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMR----------EVPSFL  283 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~----------~~~~~~  283 (365)
                                   .+.++...|++||++++.++++++.|++   +.||+||+|+||+|.|++.+          ..+...
T Consensus       149 -------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~  212 (260)
T 2z1n_A          149 -------------RPWQDLALSNIMRLPVIGVVRTLALELA---PHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEE  212 (260)
T ss_dssp             -------------SCCTTBHHHHHHTHHHHHHHHHHHHHHG---GGTEEEEEEEECHHHHCCCC----------------
T ss_pred             -------------CCCCCCchhHHHHHHHHHHHHHHHHHHh---hhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHH
Confidence                         6778889999999999999999999998   78999999999999999976          221110


Q ss_pred             HHHHHHHHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCc
Q 017812          284 SLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  328 (365)
Q Consensus       284 ~~~~~~~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~  328 (365)
                      .........|++++.+|+|+|+.+++++... ...+|+.+..++|.
T Consensus       213 ~~~~~~~~~p~~r~~~~~dva~~v~~l~s~~~~~~tG~~i~vdGG~  258 (260)
T 2z1n_A          213 ALKSMASRIPMGRVGKPEELASVVAFLASEKASFITGAVIPVDGGA  258 (260)
T ss_dssp             -------CCTTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred             HHHHHHhcCCCCCccCHHHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence            0111112236678899999999999554322 35689999988885

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=100.00  E-value=1.2e-41  Score=302.42  Aligned_cols=210  Identities=20%  Similarity=0.217  Sum_probs=179.5

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      |.+|++|||||++|||+++|++|+++|++|++++|+.++++++.+++.     .++.++++|++|+++++++++++.+  
T Consensus         1 Ms~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~--   73 (235)
T 3l6e_A            1 MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLG-----NAVIGIVADLAHHEDVDVAFAAAVE--   73 (235)
T ss_dssp             --CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG-----GGEEEEECCTTSHHHHHHHHHHHHH--
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc-----CCceEEECCCCCHHHHHHHHHHHHH--
Confidence            357999999999999999999999999999999999999988887772     2589999999999999999999988  


Q ss_pred             hccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017812          137 LDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  214 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~  214 (365)
                          .++++|+||||||+..  +..+.+.+++++++++|+.|+++++++++|.|++++  |+||++||.++.        
T Consensus        74 ----~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--~~iv~isS~~~~--------  139 (235)
T 3l6e_A           74 ----WGGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG--GVLANVLSSAAQ--------  139 (235)
T ss_dssp             ----HHCSCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC--EEEEEECCEECC--------
T ss_pred             ----hcCCCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--CEEEEEeCHHhc--------
Confidence                4578999999999863  445789999999999999999999999999998865  699999999988        


Q ss_pred             CccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHh
Q 017812          215 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLL  294 (365)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  294 (365)
                                  .+.++...|++||+|+++|+++++.|++   +.||+||+|+||+|+|++.+....          .+.
T Consensus       140 ------------~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gi~v~~v~PG~v~T~~~~~~~~----------~~~  194 (235)
T 3l6e_A          140 ------------VGKANESLYCASKWGMRGFLESLRAELK---DSPLRLVNLYPSGIRSEFWDNTDH----------VDP  194 (235)
T ss_dssp             ------------SSCSSHHHHHHHHHHHHHHHHHHHHHTT---TSSEEEEEEEEEEECCCC-------------------
T ss_pred             ------------CCCCCCcHHHHHHHHHHHHHHHHHHHhh---ccCCEEEEEeCCCccCcchhccCC----------CCC
Confidence                        7888999999999999999999999998   889999999999999999765432          123


Q ss_pred             cCCCCHHHHHHHHHHHhc
Q 017812          295 GLLQSPEKGINSVLDAAL  312 (365)
Q Consensus       295 ~~~~~p~e~A~~i~~~~l  312 (365)
                      .++.+|+|+|+.+++++.
T Consensus       195 ~~~~~pedvA~~v~~l~~  212 (235)
T 3l6e_A          195 SGFMTPEDAAAYMLDALE  212 (235)
T ss_dssp             --CBCHHHHHHHHHHHTC
T ss_pred             cCCCCHHHHHHHHHHHHh
Confidence            367899999999995443

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.4e-41  Score=305.43  Aligned_cols=234  Identities=23%  Similarity=0.260  Sum_probs=198.6

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCC--CEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREG--FHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G--~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      ||++|||||++|||+++|++|+++|  ++|++++|+.++++++.+++     +.++.++++|++|.++++++++++.+  
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~--   74 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY-----GDRFFYVVGDITEDSVLKQLVNAAVK--   74 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHH-----GGGEEEEESCTTSHHHHHHHHHHHHH--
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHh-----CCceEEEECCCCCHHHHHHHHHHHHH--
Confidence            6899999999999999999999985  79999999999888877766     45789999999999999999999988  


Q ss_pred             hccCCCCCeeEEEecCCcc---cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          137 LDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~---~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                          .++++|+||||||+.   .+..+.+.++|++++++|+.|+++++++++|+|++++  |+||++||.++.       
T Consensus        75 ----~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~--g~iv~isS~~~~-------  141 (254)
T 3kzv_A           75 ----GHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN--GNVVFVSSDACN-------  141 (254)
T ss_dssp             ----HHSCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCSCCC-------
T ss_pred             ----hcCCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--CeEEEEcCchhc-------
Confidence                458899999999985   3455789999999999999999999999999998864  899999999988       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh--------HHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS--------FLSL  285 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~--------~~~~  285 (365)
                                   .+.++...|++||+|+++|+++++.|+     +||+||+|+||+|+|++.+....        ....
T Consensus       142 -------------~~~~~~~~Y~asK~a~~~~~~~la~e~-----~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~  203 (254)
T 3kzv_A          142 -------------MYFSSWGAYGSSKAALNHFAMTLANEE-----RQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQL  203 (254)
T ss_dssp             -------------CSSCCSHHHHHHHHHHHHHHHHHHHHC-----TTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHH
T ss_pred             -------------cCCCCcchHHHHHHHHHHHHHHHHhhc-----cCcEEEEEeCCcccchhHHHhhcccCccccCHHHH
Confidence                         788889999999999999999999996     48999999999999999865421        1222


Q ss_pred             HHHHHHHHhcCCCCHHHHHHHHHHHhcCC--CCCcccEEeCCCCccc
Q 017812          286 MAFTVLKLLGLLQSPEKGINSVLDAALAP--PETSGVYFFGGKGRTV  330 (365)
Q Consensus       286 ~~~~~~~~~~~~~~p~e~A~~i~~~~l~~--~~~~G~~~~~~~g~~~  330 (365)
                      .......|++|+.+|+|+|+++++++...  ...+|+++.+|+|+..
T Consensus       204 ~~~~~~~~~~r~~~p~dva~~v~~L~s~~~~~~itG~~i~vdg~~~~  250 (254)
T 3kzv_A          204 KMFRGLKENNQLLDSSVPATVYAKLALHGIPDGVNGQYLSYNDPALA  250 (254)
T ss_dssp             HHHHHHHTTC----CHHHHHHHHHHHHHCCCGGGTTCEEETTCGGGG
T ss_pred             HHHHHHHhcCCcCCcccHHHHHHHHHhhcccCCCCccEEEecCcccc
Confidence            33445567889999999999999665443  3468999999988764

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=1.1e-41  Score=309.73  Aligned_cols=243  Identities=22%  Similarity=0.298  Sum_probs=203.9

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHH
Q 017812           54 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  133 (365)
Q Consensus        54 ~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~  133 (365)
                      +.++++|+++||||++|||+++|++|+++|++|++++|+.++++++.+++...  + ++.++++|++|+++++++++++.
T Consensus        24 ~~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~-~~~~~~~Dv~d~~~v~~~~~~~~  100 (276)
T 2b4q_A           24 YFSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAY--G-DCQAIPADLSSEAGARRLAQALG  100 (276)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTS--S-CEEECCCCTTSHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--C-ceEEEEeeCCCHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999999999888888887543  2 78899999999999999999998


Q ss_pred             HHHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCC---CCeEEEEcCCccccc
Q 017812          134 QWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPV---PSRIVNVTSFTHRNV  208 (365)
Q Consensus       134 ~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~---~g~iV~vsS~~~~~~  208 (365)
                      +      .++++|+||||||+..  +..+.+.++|++++++|+.|+++++++++|.|++++.   .|+||++||.++.  
T Consensus       101 ~------~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~--  172 (276)
T 2b4q_A          101 E------LSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGI--  172 (276)
T ss_dssp             H------HCSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGT--
T ss_pred             H------hcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHc--
Confidence            8      5688999999999864  3457789999999999999999999999999987541   2899999999987  


Q ss_pred             ccccCCCccccccccccCCCCChhh-hhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHH
Q 017812          209 FNAQVNNETITGKFFLRSKCYPCAR-IYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMA  287 (365)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~-~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~  287 (365)
                                        .+.++.. .|++||+|++.|+++++.|++   +.||+||+|+||+++|++.+...... ...
T Consensus       173 ------------------~~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gI~vn~v~PG~v~T~~~~~~~~~~-~~~  230 (276)
T 2b4q_A          173 ------------------SAMGEQAYAYGPSKAALHQLSRMLAKELV---GEHINVNVIAPGRFPSRMTRHIANDP-QAL  230 (276)
T ss_dssp             ------------------CCCCCSCTTHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECCCCSTTTHHHHHCH-HHH
T ss_pred             ------------------CCCCCCccccHHHHHHHHHHHHHHHHHhc---ccCeEEEEEEeccCcCcchhhcchhH-HHH
Confidence                              5566667 899999999999999999998   78999999999999999976432111 111


Q ss_pred             HHH--HHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017812          288 FTV--LKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  329 (365)
Q Consensus       288 ~~~--~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~  329 (365)
                      ...  ..|++++.+|+|+|+.+++++... ...+|+.+..++|..
T Consensus       231 ~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~  275 (276)
T 2b4q_A          231 EADSASIPMGRWGRPEEMAALAISLAGTAGAYMTGNVIPIDGGFH  275 (276)
T ss_dssp             HHHHHTSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             HHhhcCCCCCCcCCHHHHHHHHHHHhCccccCCCCCEEEeCCCcc
Confidence            111  346778899999999999655432 256899999998853

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=100.00  E-value=8.4e-42  Score=308.25  Aligned_cols=238  Identities=20%  Similarity=0.327  Sum_probs=189.9

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      +++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++...  +.++.++.+|++|+++++++++++.+  
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~--   77 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDA--GGTALAQVLDVTDRHSVAAFAQAAVD--   77 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHHH--
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHH--
Confidence            46899999999999999999999999999999999999999999998776  56789999999999999999999988  


Q ss_pred             hccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017812          137 LDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  214 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~  214 (365)
                          .++++|+||||||+..  +..+.+.++|++++++|+.|+++++++++|.|++++ .|+||++||.++.        
T Consensus        78 ----~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~--------  144 (264)
T 3tfo_A           78 ----TWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQR-SGQIINIGSIGAL--------  144 (264)
T ss_dssp             ----HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT--------
T ss_pred             ----HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CeEEEEEcCHHHc--------
Confidence                4578999999999863  445789999999999999999999999999998766 6999999999998        


Q ss_pred             CccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHh
Q 017812          215 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLL  294 (365)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  294 (365)
                                  .+.++...|++||+|+++|+++++.|+    + ||+||+|+||+|+|++..............  ...
T Consensus       145 ------------~~~~~~~~Y~asKaal~~l~~~la~e~----~-gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~--~~~  205 (264)
T 3tfo_A          145 ------------SVVPTAAVYCATKFAVRAISDGLRQES----T-NIRVTCVNPGVVESELAGTITHEETMAAMD--TYR  205 (264)
T ss_dssp             ------------CCCTTCHHHHHHHHHHHHHHHHHHHHC----S-SEEEEEEEECCC-----------------------
T ss_pred             ------------ccCCCChhHHHHHHHHHHHHHHHHHhC----C-CCEEEEEecCCCcCcccccccchhHHHHHH--hhh
Confidence                        788889999999999999999999995    3 999999999999999987643321111110  111


Q ss_pred             cCCCCHHHHHHHHHHHhcCCC-CCcccEEeCCCCccc
Q 017812          295 GLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKGRTV  330 (365)
Q Consensus       295 ~~~~~p~e~A~~i~~~~l~~~-~~~G~~~~~~~g~~~  330 (365)
                      +...+|+|+|+++++++..+. ..+|+..+.+.+++.
T Consensus       206 ~~~~~pedvA~~v~~l~s~~~~~~~~~i~i~p~~~~~  242 (264)
T 3tfo_A          206 AIALQPADIARAVRQVIEAPQSVDTTEITIRPTASGN  242 (264)
T ss_dssp             --CCCHHHHHHHHHHHHHSCTTEEEEEEEEEECC---
T ss_pred             ccCCCHHHHHHHHHHHhcCCccCccceEEEecCcccc
Confidence            235699999999997665543 345677776666654

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=100.00  E-value=2.5e-41  Score=305.38  Aligned_cols=244  Identities=23%  Similarity=0.292  Sum_probs=205.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.. +.++.++++|++|+++++++++++.+ 
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~-   81 (263)
T 3ai3_A            4 GISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKF-GVRVLEVAVDVATPEGVDAVVESVRS-   81 (263)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTSHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhc-CCceEEEEcCCCCHHHHHHHHHHHHH-
Confidence            3679999999999999999999999999999999999998888888886542 34788999999999999999999988 


Q ss_pred             HhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                           .++++|+||||||+..  +..+.+.++|++++++|+.|+++++++++|.|++++ .|+||++||.++.       
T Consensus        82 -----~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~-------  148 (263)
T 3ai3_A           82 -----SFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARG-GGAIIHNASICAV-------  148 (263)
T ss_dssp             -----HHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT-------
T ss_pred             -----HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhc-------
Confidence                 4578999999999863  445778999999999999999999999999998765 6899999999988       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh---------HHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS---------FLS  284 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~---------~~~  284 (365)
                                   .+.++...|++||++++.++++++.|++   +.||+||+|+||+|.|++......         ...
T Consensus       149 -------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~  212 (263)
T 3ai3_A          149 -------------QPLWYEPIYNVTKAALMMFSKTLATEVI---KDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKG  212 (263)
T ss_dssp             -------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHH
T ss_pred             -------------CCCCCcchHHHHHHHHHHHHHHHHHHhh---hcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHH
Confidence                         6777889999999999999999999998   789999999999999998654311         111


Q ss_pred             H-HHHHHH-HHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017812          285 L-MAFTVL-KLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  330 (365)
Q Consensus       285 ~-~~~~~~-~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~  330 (365)
                      . ...... .|++++.+|+|+|+.+++++... ...+|+.+..++|...
T Consensus       213 ~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~~G~~~~vdgG~~~  261 (263)
T 3ai3_A          213 YLQSVADEHAPIKRFASPEELANFFVFLCSERATYSVGSAYFVDGGMLK  261 (263)
T ss_dssp             HHHHHHHHHCTTCSCBCHHHHHHHHHHHTSTTCTTCCSCEEEESTTCCC
T ss_pred             HHHHHHhcCCCCCCCcCHHHHHHHHHHHcCccccCCCCcEEEECCCccc
Confidence            1 111122 46778999999999999554322 2457999999988754

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=100.00  E-value=2.2e-41  Score=305.07  Aligned_cols=242  Identities=21%  Similarity=0.229  Sum_probs=203.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHH---CCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSR---EGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  132 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~---~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~  132 (365)
                      ++++|++|||||++|||+++|++|++   +|++|++++|+.++++++.+++.+.+++.++.++++|++|+++++++++++
T Consensus         3 ~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   82 (259)
T 1oaa_A            3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV   82 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHH
Confidence            36799999999999999999999999   899999999999999999999887655678999999999999999999988


Q ss_pred             HHHHhccCCCCCee--EEEecCCcccC----CCC-CCHHHHhHhHHHHhHHHHHHHHHHhHhhhcC-CCCCeEEEEcCCc
Q 017812          133 QQWLLDSDMHSSIQ--LLINNAGILAT----SSR-LTPEGYDQMMSTNYIGAFFLTKLLLPLLKNS-PVPSRIVNVTSFT  204 (365)
Q Consensus       133 ~~~~~~~~~~~~id--~lv~nAG~~~~----~~~-~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~-~~~g~iV~vsS~~  204 (365)
                      .+..    .++++|  +||||||+..+    ..+ .+.+++++++++|+.|+++++++++|.|+++ +..|+||++||.+
T Consensus        83 ~~~~----~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~  158 (259)
T 1oaa_A           83 RELP----RPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLC  158 (259)
T ss_dssp             HHSC----CCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGG
T ss_pred             Hhcc----ccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCch
Confidence            7621    246788  99999998632    345 6889999999999999999999999999876 1268999999999


Q ss_pred             ccccccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh---
Q 017812          205 HRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS---  281 (365)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~---  281 (365)
                      +.                    .+.++...|++||+|+++|+++++.|+.     +|+||+|+||+|+|++.+....   
T Consensus       159 ~~--------------------~~~~~~~~Y~asKaa~~~~~~~la~e~~-----~i~vn~v~PG~v~T~~~~~~~~~~~  213 (259)
T 1oaa_A          159 AL--------------------QPYKGWGLYCAGKAARDMLYQVLAAEEP-----SVRVLSYAPGPLDNDMQQLARETSK  213 (259)
T ss_dssp             GT--------------------SCCTTCHHHHHHHHHHHHHHHHHHHHCT-----TEEEEEEECCSBSSHHHHHHHHHCS
T ss_pred             hc--------------------CCCCCccHHHHHHHHHHHHHHHHHhhCC-----CceEEEecCCCcCcchHHHHhhccC
Confidence            88                    7788899999999999999999999985     3999999999999998764321   


Q ss_pred             -HHHHHHHHHHHHhcCCCCHHHHHHHHHHHhcCCCCCcccEEeCCC
Q 017812          282 -FLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGK  326 (365)
Q Consensus       282 -~~~~~~~~~~~~~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~  326 (365)
                       ...........|++++.+|+|+|+.+++++......+|+.+..++
T Consensus       214 ~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~~~~~~itG~~i~vdg  259 (259)
T 1oaa_A          214 DPELRSKLQKLKSDGALVDCGTSAQKLLGLLQKDTFQSGAHVDFYD  259 (259)
T ss_dssp             CHHHHHHHHHHHHTTCSBCHHHHHHHHHHHHHHCCSCTTEEEETTC
T ss_pred             ChhHHHHHHHhhhcCCcCCHHHHHHHHHHHHhhccccCCcEEeccC
Confidence             111122233457788999999999999877654567888887553

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=100.00  E-value=2.5e-41  Score=309.96  Aligned_cols=243  Identities=14%  Similarity=0.115  Sum_probs=199.7

Q ss_pred             CCCCCCCEEEEecCC--ChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHH
Q 017812           54 ITGIKRPVCIVTGAT--SGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDS  131 (365)
Q Consensus        54 ~~~~~~k~vlITGas--sGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~  131 (365)
                      +.+++||++|||||+  +|||+++|++|+++|++|++++|+++.. +..+++.+..  .++.++++|++|.+++++++++
T Consensus        26 ~~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~-~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~  102 (293)
T 3grk_A           26 SGLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALK-KRVEPLAEEL--GAFVAGHCDVADAASIDAVFET  102 (293)
T ss_dssp             -CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHH-HHHHHHHHHH--TCEEEEECCTTCHHHHHHHHHH
T ss_pred             cccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHH-HHHHHHHHhc--CCceEEECCCCCHHHHHHHHHH
Confidence            446899999999999  5599999999999999999999996443 3344444443  3588999999999999999999


Q ss_pred             HHHHHhccCCCCCeeEEEecCCccc------CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017812          132 LQQWLLDSDMHSSIQLLINNAGILA------TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  205 (365)
Q Consensus       132 ~~~~~~~~~~~~~id~lv~nAG~~~------~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~  205 (365)
                      +.+      .++++|+||||||+..      +..+.+.++|++++++|+.|+++++++++|+|++   .|+||++||.++
T Consensus       103 ~~~------~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~---~g~Iv~isS~~~  173 (293)
T 3grk_A          103 LEK------KWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMAD---GGSILTLTYYGA  173 (293)
T ss_dssp             HHH------HTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTT---CEEEEEEECGGG
T ss_pred             HHH------hcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccC---CCEEEEEeehhh
Confidence            998      5689999999999863      4457899999999999999999999999999976   489999999998


Q ss_pred             cccccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHH-
Q 017812          206 RNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLS-  284 (365)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~-  284 (365)
                      .                    .+.+++..|++||+|+++|+++++.|++   +.||+||+|+||+|+|++.+....... 
T Consensus       174 ~--------------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gI~vn~v~PG~v~T~~~~~~~~~~~~  230 (293)
T 3grk_A          174 E--------------------KVMPNYNVMGVAKAALEASVKYLAVDLG---PQNIRVNAISAGPIKTLAASGIGDFRYI  230 (293)
T ss_dssp             T--------------------SBCTTTTHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECCCCC------CCHHHH
T ss_pred             c--------------------cCCCchHHHHHHHHHHHHHHHHHHHHHh---HhCCEEEEEecCCCcchhhhcccchHHH
Confidence            8                    7788899999999999999999999998   789999999999999999876543222 


Q ss_pred             HHHHHHHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcccc
Q 017812          285 LMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVN  331 (365)
Q Consensus       285 ~~~~~~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~~  331 (365)
                      ........|++|+.+|+|+|+++++++... ...+|+.+.+|+|..+.
T Consensus       231 ~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~  278 (293)
T 3grk_A          231 LKWNEYNAPLRRTVTIDEVGDVGLYFLSDLSRSVTGEVHHADSGYHVI  278 (293)
T ss_dssp             HHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGB
T ss_pred             HHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCCcceEEEECCCcccC
Confidence            222334457889999999999999544322 35789999999998764

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=100.00  E-value=6.1e-42  Score=308.35  Aligned_cols=237  Identities=19%  Similarity=0.252  Sum_probs=191.2

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.++.   .+++     +.++.++++|++|+++++++++.+.+
T Consensus         5 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~---~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~   76 (257)
T 3tl3_A            5 MEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDV---VADL-----GDRARFAAADVTDEAAVASALDLAET   76 (257)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHH---HHHT-----CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHH---HHhc-----CCceEEEECCCCCHHHHHHHHHHHHH
Confidence            357899999999999999999999999999999999976532   2222     45789999999999999999998865


Q ss_pred             HHhccCCCCCeeEEEecCCcccC------CCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcC-------CCCCeEEEEc
Q 017812          135 WLLDSDMHSSIQLLINNAGILAT------SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNS-------PVPSRIVNVT  201 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~~------~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~-------~~~g~iV~vs  201 (365)
                             ++++|+||||||+...      ..+.+.++|++++++|+.|+++++++++|+|.+.       +..|+||++|
T Consensus        77 -------~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~is  149 (257)
T 3tl3_A           77 -------MGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTA  149 (257)
T ss_dssp             -------HSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEEC
T ss_pred             -------hCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEc
Confidence                   3789999999998632      2357899999999999999999999999999872       2368999999


Q ss_pred             CCcccccccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh
Q 017812          202 SFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS  281 (365)
Q Consensus       202 S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~  281 (365)
                      |.++.                    .+.++...|++||+|+++|+++++.|++   +.||+||+|+||+|+|++.+..+.
T Consensus       150 S~~~~--------------------~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gI~vn~v~PG~v~T~~~~~~~~  206 (257)
T 3tl3_A          150 SVAAF--------------------DGQIGQAAYSASKGGVVGMTLPIARDLA---SHRIRVMTIAPGLFDTPLLASLPE  206 (257)
T ss_dssp             CCC----------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCCTTC---CH
T ss_pred             chhhc--------------------CCCCCCccHHHHHHHHHHHHHHHHHHhc---ccCcEEEEEEecCccChhhhhccH
Confidence            99988                    7788899999999999999999999998   789999999999999999887654


Q ss_pred             HHHHHHHHHHHHh-cCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcccc
Q 017812          282 FLSLMAFTVLKLL-GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  331 (365)
Q Consensus       282 ~~~~~~~~~~~~~-~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~~  331 (365)
                      .... ......+. +|+.+|+|+|+.+++++. ++..+|+.+.+|+|..+.
T Consensus       207 ~~~~-~~~~~~~~~~r~~~p~dva~~v~~l~s-~~~itG~~i~vdGG~~~~  255 (257)
T 3tl3_A          207 EARA-SLGKQVPHPSRLGNPDEYGALAVHIIE-NPMLNGEVIRLDGAIRMA  255 (257)
T ss_dssp             HHHH-HHHHTSSSSCSCBCHHHHHHHHHHHHH-CTTCCSCEEEESTTC---
T ss_pred             HHHH-HHHhcCCCCCCccCHHHHHHHHHHHhc-CCCCCCCEEEECCCccCC
Confidence            3221 12222345 788999999999997664 367899999999997654

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=2.3e-41  Score=302.41  Aligned_cols=235  Identities=20%  Similarity=0.236  Sum_probs=199.6

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      +++|+++||||++|||+++|++|+++|++|++++|+.++++++.+++     +  +.++++|++|+++++++++++.+  
T Consensus         3 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~--~~~~~~D~~~~~~~~~~~~~~~~--   73 (245)
T 1uls_A            3 LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-----G--AHPVVMDVADPASVERGFAEALA--   73 (245)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-----T--CEEEECCTTCHHHHHHHHHHHHH--
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-----C--CEEEEecCCCHHHHHHHHHHHHH--
Confidence            67899999999999999999999999999999999988777665443     2  78899999999999999999988  


Q ss_pred             hccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017812          137 LDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  214 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~  214 (365)
                          .++++|+||||||+..  +..+.+.++|++++++|+.|+++++++++|+|++++ .|+||++||.+ .        
T Consensus        74 ----~~g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~-~--------  139 (245)
T 1uls_A           74 ----HLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKN-PGSIVLTASRV-Y--------  139 (245)
T ss_dssp             ----HHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-CEEEEEECCGG-G--------
T ss_pred             ----HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEccch-h--------
Confidence                4578999999999863  345778999999999999999999999999998875 69999999988 6        


Q ss_pred             CccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHh
Q 017812          215 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLL  294 (365)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  294 (365)
                                  .+.++...|++||+++++|+++++.|++   +.||+||+|+||+|+|++.+..+... ........|+
T Consensus       140 ------------~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~v~~v~PG~v~t~~~~~~~~~~-~~~~~~~~p~  203 (245)
T 1uls_A          140 ------------LGNLGQANYAASMAGVVGLTRTLALELG---RWGIRVNTLAPGFIETRMTAKVPEKV-REKAIAATPL  203 (245)
T ss_dssp             ------------GCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCCTTTSSSCHHH-HHHHHHTCTT
T ss_pred             ------------cCCCCchhHHHHHHHHHHHHHHHHHHHh---HhCeEEEEEEeCcCcCcchhhcCHHH-HHHHHhhCCC
Confidence                        5667788999999999999999999998   78999999999999999987653321 1112222366


Q ss_pred             cCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017812          295 GLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  330 (365)
Q Consensus       295 ~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~  330 (365)
                      +++.+|+|+|+.+++++... ...+|+.+..++|..+
T Consensus       204 ~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~~  240 (245)
T 1uls_A          204 GRAGKPLEVAYAALFLLSDESSFITGQVLFVDGGRTI  240 (245)
T ss_dssp             CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTT
T ss_pred             CCCcCHHHHHHHHHHHhCchhcCCcCCEEEECCCccc
Confidence            78899999999999655432 3568999999998765

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=2.7e-42  Score=315.57  Aligned_cols=255  Identities=18%  Similarity=0.240  Sum_probs=203.5

Q ss_pred             CCCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecC------------chhHHHHHHHHHhhcCCCceEEEEecCC
Q 017812           53 PITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRS------------SHLLSETMADITSRNKDARLEAFQVDLS  120 (365)
Q Consensus        53 ~~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~------------~~~~~~~~~~l~~~~~~~~~~~~~~Dls  120 (365)
                      ++.+++||+||||||++|||+++|++|+++|++|++++|+            .+.+++...++...  +.++.++++|++
T Consensus         4 ~m~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~   81 (287)
T 3pxx_A            4 SMGRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKT--GRKAYTAEVDVR   81 (287)
T ss_dssp             SCCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHT--TSCEEEEECCTT
T ss_pred             cccccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhc--CCceEEEEccCC
Confidence            4567899999999999999999999999999999999998            66777777777655  568999999999


Q ss_pred             ChhhHHHHHHHHHHHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEE
Q 017812          121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNV  200 (365)
Q Consensus       121 ~~~~v~~~~~~~~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~v  200 (365)
                      |+++++++++++.+      .++++|+||||||+.....+.+.+++++++++|+.|+++++++++|+|.+   .|+||++
T Consensus        82 ~~~~v~~~~~~~~~------~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~i  152 (287)
T 3pxx_A           82 DRAAVSRELANAVA------EFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTS---GASIITT  152 (287)
T ss_dssp             CHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCT---TCEEEEE
T ss_pred             CHHHHHHHHHHHHH------HcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhc---CcEEEEe
Confidence            99999999999988      45789999999999755455789999999999999999999999999933   5899999


Q ss_pred             cCCcccccccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccch
Q 017812          201 TSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP  280 (365)
Q Consensus       201 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~  280 (365)
                      ||.++.........         ....+.++...|++||+|+++|+++++.|++   +.||+||+|+||+|+|++.+..+
T Consensus       153 sS~~~~~~~~~~~~---------~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~vn~v~PG~v~T~~~~~~~  220 (287)
T 3pxx_A          153 GSVAGLIAAAQPPG---------AGGPQGPGGAGYSYAKQLVDSYTLQLAAQLA---PQSIRANVIHPTNVNTDMLNSAP  220 (287)
T ss_dssp             CCHHHHHHHHCCC--------------CHHHHHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEESSBSSTTTSSHH
T ss_pred             ccchhccccccccc---------ccccCCCccchHHHHHHHHHHHHHHHHHHHh---hcCcEEEEEecCccccccccccc
Confidence            99987733211100         0013347788999999999999999999998   78999999999999999986532


Q ss_pred             hHHHH----------HHHH-----HHHHhcCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCcccc
Q 017812          281 SFLSL----------MAFT-----VLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTVN  331 (365)
Q Consensus       281 ~~~~~----------~~~~-----~~~~~~~~~~p~e~A~~i~~~~l~-~~~~~G~~~~~~~g~~~~  331 (365)
                      .....          ....     ...| +++.+|+|+|+++++++.. +...+|+.+.+|+|..++
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG~~~~  286 (287)
T 3pxx_A          221 MYRQFRPDLEAPSRADALLAFPAMQAMP-TPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAMLK  286 (287)
T ss_dssp             HHHHHCTTSSSCCHHHHHHHGGGGCSSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred             hhhhhccccccchhHHHHhhhhhhcccC-CCCCCHHHHHhhHheecchhhcCCCCceEeECchhhhc
Confidence            21100          0000     0011 5788999999999954432 135689999999997653

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=100.00  E-value=1.4e-41  Score=305.74  Aligned_cols=240  Identities=23%  Similarity=0.308  Sum_probs=202.7

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhc
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  138 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~  138 (365)
                      +|+++||||++|||+++|++|+++|++|++++|+.++++++.+++...  +.++.++++|++|.++++++++++.+    
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~----   75 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA--GGHAVAVKVDVSDRDQVFAAVEQARK----   75 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHH----
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHH----
Confidence            689999999999999999999999999999999999988888888665  45788999999999999999999988    


Q ss_pred             cCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017812          139 SDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  216 (365)
Q Consensus       139 ~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~  216 (365)
                        .++++|+||||||+..  +..+.+.+++++++++|+.|+++++++++|.|++++..|+||++||.++.          
T Consensus        76 --~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~----------  143 (256)
T 1geg_A           76 --TLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGH----------  143 (256)
T ss_dssp             --HTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT----------
T ss_pred             --HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhc----------
Confidence              5688999999999863  44577899999999999999999999999999875324899999999988          


Q ss_pred             cccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh----------HHHHH
Q 017812          217 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS----------FLSLM  286 (365)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~----------~~~~~  286 (365)
                                .+.++...|++||+|+++|+++++.|++   +.||+||+|+||+|+|++......          .....
T Consensus       144 ----------~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~  210 (256)
T 1geg_A          144 ----------VGNPELAVYSSSKFAVRGLTQTAARDLA---PLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTA  210 (256)
T ss_dssp             ----------SCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHH
T ss_pred             ----------CCCCCchhHHHHHHHHHHHHHHHHHHHH---HcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHH
Confidence                      6778889999999999999999999998   789999999999999998654311          00011


Q ss_pred             HHHHHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017812          287 AFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  329 (365)
Q Consensus       287 ~~~~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~  329 (365)
                      ......|++++.+|+|+|+.+++++... ...+|+.+..++|..
T Consensus       211 ~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~  254 (256)
T 1geg_A          211 EFAKRITLGRLSEPEDVAACVSYLASPDSDYMTGQSLLIDGGMV  254 (256)
T ss_dssp             HHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSS
T ss_pred             HHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEeCCCcc
Confidence            1111236678899999999999655332 256899999998864

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=100.00  E-value=2.8e-41  Score=307.32  Aligned_cols=245  Identities=23%  Similarity=0.270  Sum_probs=206.8

Q ss_pred             CCCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHH
Q 017812           53 PITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  132 (365)
Q Consensus        53 ~~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~  132 (365)
                      .+.++++|+++||||++|||+++|++|+++|++|++++|++++++++.+++.+.  +.++.++++|++|+++++++++++
T Consensus        16 ~m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~~~~~v~~~~~~~   93 (277)
T 2rhc_B           16 HMATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA--GVEADGRTCDVRSVPEIEALVAAV   93 (277)
T ss_dssp             TTCCTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHH
Confidence            344578999999999999999999999999999999999999988888888665  457889999999999999999999


Q ss_pred             HHHHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHh--hhcCCCCCeEEEEcCCccccc
Q 017812          133 QQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPL--LKNSPVPSRIVNVTSFTHRNV  208 (365)
Q Consensus       133 ~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~--~~~~~~~g~iV~vsS~~~~~~  208 (365)
                      .+      .++++|+||||||+..  +..+.+.++|++++++|+.|+++++++++|.  |++++ .|+||++||.++.  
T Consensus        94 ~~------~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~-~g~iv~isS~~~~--  164 (277)
T 2rhc_B           94 VE------RYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERG-TGRIVNIASTGGK--  164 (277)
T ss_dssp             HH------HTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHT-EEEEEEECCGGGT--
T ss_pred             HH------HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcC-CeEEEEECccccc--
Confidence            88      5688999999999863  3457789999999999999999999999999  87754 6899999999987  


Q ss_pred             ccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh-------
Q 017812          209 FNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS-------  281 (365)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~-------  281 (365)
                                        .+.++...|++||+|++.|+++++.|++   +.||+||+|+||+++|++......       
T Consensus       165 ------------------~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~  223 (277)
T 2rhc_B          165 ------------------QGVVHAAPYSASKHGVVGFTKALGLELA---RTGITVNAVCPGFVETPMAASVREHYSDIWE  223 (277)
T ss_dssp             ------------------SCCTTCHHHHHHHHHHHHHHHHHHHHHT---TTEEEEEEEEECSBCSHHHHHHHHHHHHHHT
T ss_pred             ------------------cCCCCCccHHHHHHHHHHHHHHHHHHHH---HhCcEEEEEecCcCcCchhhhhhhhcccccc
Confidence                              6778889999999999999999999998   789999999999999998654311       


Q ss_pred             ---HHHHHHHHHHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017812          282 ---FLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  329 (365)
Q Consensus       282 ---~~~~~~~~~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~  329 (365)
                         ...........|++++.+|+|+|+++++++... ...+|+.+..++|..
T Consensus       224 ~~~~~~~~~~~~~~p~~r~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdGG~~  275 (277)
T 2rhc_B          224 VSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGGLG  275 (277)
T ss_dssp             CCHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred             cchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCCCcEEEECCCcc
Confidence               011111222346778999999999999655322 256899999898853

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=100.00  E-value=3.3e-41  Score=304.41  Aligned_cols=235  Identities=22%  Similarity=0.282  Sum_probs=193.5

Q ss_pred             CCCCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHH
Q 017812           52 PPITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDS  131 (365)
Q Consensus        52 ~~~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~  131 (365)
                      .++.++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.  +.++.++.+|++|.+++++++++
T Consensus        22 ~~m~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~   99 (262)
T 3rkr_A           22 KHMSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAA--GGEAESHACDLSHSDAIAAFATG   99 (262)
T ss_dssp             ---CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHH
T ss_pred             chhhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHh--CCceeEEEecCCCHHHHHHHHHH
Confidence            3466789999999999999999999999999999999999999999999988766  46789999999999999999999


Q ss_pred             HHHHHhccCCCCCeeEEEecCCcc---cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccc
Q 017812          132 LQQWLLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNV  208 (365)
Q Consensus       132 ~~~~~~~~~~~~~id~lv~nAG~~---~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~  208 (365)
                      +.+      .++++|+||||||+.   .+..+.+.+++++++++|+.|++.++++++|.|++++ .|+||++||.++.  
T Consensus       100 ~~~------~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~--  170 (262)
T 3rkr_A          100 VLA------AHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAK-RGHIINISSLAGK--  170 (262)
T ss_dssp             HHH------HHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CCEEEEECSSCSS--
T ss_pred             HHH------hcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CceEEEEechhhc--
Confidence            988      457899999999984   3456789999999999999999999999999998876 7999999999988  


Q ss_pred             ccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHH
Q 017812          209 FNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAF  288 (365)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~  288 (365)
                                        .+.++...|++||+|+++|+++++.|++   +.||+|++|+||+|+|++.......      
T Consensus       171 ------------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gi~v~~v~PG~v~t~~~~~~~~~------  223 (262)
T 3rkr_A          171 ------------------NPVADGAAYTASKWGLNGLMTSAAEELR---QHQVRVSLVAPGSVRTEFGVGLSAK------  223 (262)
T ss_dssp             ------------------CCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEECCC-----------------
T ss_pred             ------------------CCCCCCchHHHHHHHHHHHHHHHHHHhh---hcCcEEEEEecCCCcCCcccccccc------
Confidence                              7888899999999999999999999998   7899999999999999997654321      


Q ss_pred             HHHHHhcCCCCHHHHHHHHHHHhcCCC-CCcccEEeCCCC
Q 017812          289 TVLKLLGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKG  327 (365)
Q Consensus       289 ~~~~~~~~~~~p~e~A~~i~~~~l~~~-~~~G~~~~~~~g  327 (365)
                         .+..++.+|+|+|+.+++++.... ...|+.+..+.+
T Consensus       224 ---~~~~~~~~p~dvA~~v~~l~s~~~~~~~g~~~i~p~~  260 (262)
T 3rkr_A          224 ---KSALGAIEPDDIADVVALLATQADQSFISEVLVRPTL  260 (262)
T ss_dssp             --------CCCHHHHHHHHHHHHTCCTTCCEEEEEEECCC
T ss_pred             ---cccccCCCHHHHHHHHHHHhcCccccccCcEEecccc
Confidence               233467799999999996554432 445777765544

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=100.00  E-value=9.3e-42  Score=307.35  Aligned_cols=240  Identities=21%  Similarity=0.270  Sum_probs=202.1

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchh--HHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHL--LSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~--~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      +|+++||||++|||+++|++|+++|++|++++|+.++  ++++.+++...  +.++.++++|++|+++++++++++.+  
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~--   77 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAA--DQKAVFVGLDVTDKANFDSAIDEAAE--   77 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHHHH--
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHH--
Confidence            6899999999999999999999999999999999887  88888887654  45789999999999999999999988  


Q ss_pred             hccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017812          137 LDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  214 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~  214 (365)
                          .++++|+||||||+..  +..+.+.++|++++++|+.|+++++++++|.|++++..|+||++||.++.        
T Consensus        78 ----~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~--------  145 (258)
T 3a28_C           78 ----KLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAI--------  145 (258)
T ss_dssp             ----HHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGT--------
T ss_pred             ----HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhc--------
Confidence                4578999999999863  34577899999999999999999999999999876522899999999988        


Q ss_pred             CccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccch-h---------HHH
Q 017812          215 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP-S---------FLS  284 (365)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~-~---------~~~  284 (365)
                                  .+.++...|++||+++++|+++++.|++   +.||+||+|+||+|+|++.+... .         ...
T Consensus       146 ------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~  210 (258)
T 3a28_C          146 ------------QGFPILSAYSTTKFAVRGLTQAAAQELA---PKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGEN  210 (258)
T ss_dssp             ------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHH
T ss_pred             ------------cCCCCchhHHHHHHHHHHHHHHHHHHHH---hhCeEEEEEECCccCChhhhhhhhhhccccCCchHHH
Confidence                        6778889999999999999999999998   78999999999999999865421 0         000


Q ss_pred             HHHHHHHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017812          285 LMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  329 (365)
Q Consensus       285 ~~~~~~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~  329 (365)
                      ........|++|+.+|+|+|+.+++++... ...+|+.+..++|..
T Consensus       211 ~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~  256 (258)
T 3a28_C          211 FKEYSSSIALGRPSVPEDVAGLVSFLASENSNYVTGQVMLVDGGML  256 (258)
T ss_dssp             HHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSC
T ss_pred             HHHHHhcCCCCCccCHHHHHHHHHHHhCcccCCCCCCEEEECCCEe
Confidence            111112236678899999999999655322 256899999998864

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=1.9e-41  Score=311.44  Aligned_cols=251  Identities=22%  Similarity=0.268  Sum_probs=207.8

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcC-CCceEEEEecCCChhhHHHHHHHHH
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNK-DARLEAFQVDLSSFQSVLKFKDSLQ  133 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dls~~~~v~~~~~~~~  133 (365)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.+. ..++.++.+|++|+++++++++++.
T Consensus        22 ~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  101 (297)
T 1xhl_A           22 ARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTL  101 (297)
T ss_dssp             -CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHH
Confidence            357899999999999999999999999999999999999999988888866421 1278999999999999999999998


Q ss_pred             HHHhccCCCCCeeEEEecCCcccC----CCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccc
Q 017812          134 QWLLDSDMHSSIQLLINNAGILAT----SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVF  209 (365)
Q Consensus       134 ~~~~~~~~~~~id~lv~nAG~~~~----~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~  209 (365)
                      +      .++++|+||||||+...    ..+.+.++|++++++|+.|+++++++++|.|++++  |+||++||.++.   
T Consensus       102 ~------~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~--g~IV~isS~~~~---  170 (297)
T 1xhl_A          102 A------KFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK--GEIVNVSSIVAG---  170 (297)
T ss_dssp             H------HHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT--CEEEEECCGGGS---
T ss_pred             H------hcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC--CEEEEEcCchhc---
Confidence            8      45789999999998633    45778999999999999999999999999998765  899999999887   


Q ss_pred             cccCCCccccccccccCCCC-ChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc--hhHH--H
Q 017812          210 NAQVNNETITGKFFLRSKCY-PCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV--PSFL--S  284 (365)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~-~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~--~~~~--~  284 (365)
                                       .+. ++...|++||+|++.|+++++.|++   +.||+||+|+||+|+|++.+..  +...  .
T Consensus       171 -----------------~~~~~~~~~Y~asKaa~~~l~~~la~el~---~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~  230 (297)
T 1xhl_A          171 -----------------PQAHSGYPYYACAKAALDQYTRCTAIDLI---QHGVRVNSVSPGAVATGFMGAMGLPETASDK  230 (297)
T ss_dssp             -----------------SSCCTTSHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEECCBCSSHHHHTTCCHHHHHH
T ss_pred             -----------------cCCCCCcchHHHHHHHHHHHHHHHHHHhc---ccCeEEEEEeeCCCcCccccccccccccccc
Confidence                             555 7788999999999999999999998   7899999999999999987643  1110  0


Q ss_pred             HHHH----HHHHHhcCCCCHHHHHHHHHHHhcC--CCCCcccEEeCCCCccccCCccc
Q 017812          285 LMAF----TVLKLLGLLQSPEKGINSVLDAALA--PPETSGVYFFGGKGRTVNSSALS  336 (365)
Q Consensus       285 ~~~~----~~~~~~~~~~~p~e~A~~i~~~~l~--~~~~~G~~~~~~~g~~~~~~~~~  336 (365)
                      ....    ....|++++.+|+|+|+.+++++..  +...+|+.+..++|........+
T Consensus       231 ~~~~~~~~~~~~p~~r~~~pedvA~~v~~l~s~~~~~~itG~~i~vdGG~~~~~~~~~  288 (297)
T 1xhl_A          231 LYSFIGSRKECIPVGHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGSTLVMGMQT  288 (297)
T ss_dssp             HHHHHHHCTTTCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGCCGGGG
T ss_pred             hHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCcccCCccCcEEEECCCccccccccc
Confidence            0000    1113567889999999999965532  23578999999999876544433

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=100.00  E-value=2.3e-41  Score=305.93  Aligned_cols=234  Identities=20%  Similarity=0.258  Sum_probs=194.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      ++.+|++|||||++|||+++|++|+++|++|++++|+.+++++..        ..++.++++|++|.++++++++++.+ 
T Consensus        13 ~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~Dv~d~~~v~~~~~~~~~-   83 (266)
T 3p19_A           13 GSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALN--------LPNTLCAQVDVTDKYTFDTAITRAEK-   83 (266)
T ss_dssp             --CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTC--------CTTEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhh--------cCCceEEEecCCCHHHHHHHHHHHHH-
Confidence            467899999999999999999999999999999999987654321        33788999999999999999999988 


Q ss_pred             HhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                           .++++|+||||||+..  +..+.+.++|++++++|+.|+++++++++|.|++++ .|+||++||.++.       
T Consensus        84 -----~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~IV~isS~~~~-------  150 (266)
T 3p19_A           84 -----IYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARN-CGTIINISSIAGK-------  150 (266)
T ss_dssp             -----HHCSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGT-------
T ss_pred             -----HCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhC-------
Confidence                 4588999999999863  455778999999999999999999999999998766 6999999999988       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHH-HHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMA-FTVLK  292 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~-~~~~~  292 (365)
                                   .+.++...|++||+|+++|+++++.|++   +.||+||+|+||+|+|++............ .....
T Consensus       151 -------------~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  214 (266)
T 3p19_A          151 -------------KTFPDHAAYCGTKFAVHAISENVREEVA---ASNVRVMTIAPSAVKTELLSHTTSQQIKDGYDAWRV  214 (266)
T ss_dssp             -------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEECSBSSSGGGGCSCHHHHHHHHHHHH
T ss_pred             -------------CCCCCCchHHHHHHHHHHHHHHHHHHhc---ccCcEEEEEeeCccccchhhcccchhhhHHHHhhcc
Confidence                         7888899999999999999999999998   789999999999999999876543222111 12234


Q ss_pred             HhcCCCCHHHHHHHHHHHhcCCCC-CcccEEeCCCC
Q 017812          293 LLGLLQSPEKGINSVLDAALAPPE-TSGVYFFGGKG  327 (365)
Q Consensus       293 ~~~~~~~p~e~A~~i~~~~l~~~~-~~G~~~~~~~g  327 (365)
                      |++++.+|+|+|+++++++..+.. ..++......+
T Consensus       215 ~~~r~~~pedvA~av~~l~~~~~~~~~~~i~i~p~~  250 (266)
T 3p19_A          215 DMGGVLAADDVARAVLFAYQQPQNVCIREIALAPTK  250 (266)
T ss_dssp             HTTCCBCHHHHHHHHHHHHHSCTTEEEEEEEEEETT
T ss_pred             cccCCCCHHHHHHHHHHHHcCCCCccceeeEEecCC
Confidence            788999999999999976655442 23444443333

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=100.00  E-value=6.6e-41  Score=303.09  Aligned_cols=247  Identities=13%  Similarity=0.117  Sum_probs=208.5

Q ss_pred             CCCCCEEEEecCC--ChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHH
Q 017812           56 GIKRPVCIVTGAT--SGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  133 (365)
Q Consensus        56 ~~~~k~vlITGas--sGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~  133 (365)
                      +++||++|||||+  +|||+++|++|+++|++|++++|+.+..+.+ +++.+..++.++.++++|++|.++++++++++.
T Consensus         4 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   82 (266)
T 3oig_A            4 SLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSV-HELAGTLDRNDSIILPCDVTNDAEIETCFASIK   82 (266)
T ss_dssp             CCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHH-HHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHH
T ss_pred             ccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHH-HHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHH
Confidence            4789999999999  6799999999999999999999997555444 444444444579999999999999999999999


Q ss_pred             HHHhccCCCCCeeEEEecCCccc------CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccc
Q 017812          134 QWLLDSDMHSSIQLLINNAGILA------TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRN  207 (365)
Q Consensus       134 ~~~~~~~~~~~id~lv~nAG~~~------~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~  207 (365)
                      +      .++++|+||||||+..      +..+.+.+++++++++|+.+++.++++++|+|++   .|+||++||.++. 
T Consensus        83 ~------~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~g~iv~isS~~~~-  152 (266)
T 3oig_A           83 E------QVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTE---GGSIVTLTYLGGE-  152 (266)
T ss_dssp             H------HHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT---CEEEEEEECGGGT-
T ss_pred             H------HhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCC---CceEEEEeccccc-
Confidence            8      4578999999999864      3456789999999999999999999999999975   4899999999988 


Q ss_pred             cccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHH-HH
Q 017812          208 VFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLS-LM  286 (365)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~-~~  286 (365)
                                         .+.++...|++||+|+++|++++++|++   +.||+|++|+||+|+|++.+....... ..
T Consensus       153 -------------------~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~  210 (266)
T 3oig_A          153 -------------------LVMPNYNVMGVAKASLDASVKYLAADLG---KENIRVNSISAGPIRTLSAKGISDFNSILK  210 (266)
T ss_dssp             -------------------SCCTTTHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECCCCSGGGTTCTTHHHHHH
T ss_pred             -------------------ccCCCcchhHHHHHHHHHHHHHHHHHHh---hcCcEEEEEecCcccccccccccchHHHHH
Confidence                               7888999999999999999999999998   789999999999999999887654322 22


Q ss_pred             HHHHHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccccCCcc
Q 017812          287 AFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVNSSAL  335 (365)
Q Consensus       287 ~~~~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~~~~~~  335 (365)
                      ......|++++.+|+|+|+.+++++... ...+|+.+..|+|........
T Consensus       211 ~~~~~~~~~~~~~p~dva~~v~~l~s~~~~~~tG~~i~vdGG~~~~~~~~  260 (266)
T 3oig_A          211 DIEERAPLRRTTTPEEVGDTAAFLFSDMSRGITGENLHVDSGFHITARLE  260 (266)
T ss_dssp             HHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCCCCC
T ss_pred             HHHhcCCCCCCCCHHHHHHHHHHHcCCchhcCcCCEEEECCCeEEeeecC
Confidence            3334456788899999999999655432 357899999999988765544

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=100.00  E-value=8e-42  Score=310.44  Aligned_cols=229  Identities=19%  Similarity=0.278  Sum_probs=191.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchh-------HHHHHHHHHhhcCCCceEEEEecCCChhhHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHL-------LSETMADITSRNKDARLEAFQVDLSSFQSVLKF  128 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~-------~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~  128 (365)
                      +++||++|||||++|||+++|++|+++|++|++++|+.++       +++..+++...  +.++.++++|++|+++++++
T Consensus         3 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~   80 (274)
T 3e03_A            3 TLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAA--GGQGLALKCDIREEDQVRAA   80 (274)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHH--TSEEEEEECCTTCHHHHHHH
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhc--CCeEEEEeCCCCCHHHHHHH
Confidence            4789999999999999999999999999999999999764       66677777665  56899999999999999999


Q ss_pred             HHHHHHHHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccc
Q 017812          129 KDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHR  206 (365)
Q Consensus       129 ~~~~~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~  206 (365)
                      ++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.|+++++++++|+|++++ .|+||++||.++.
T Consensus        81 ~~~~~~------~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~  153 (274)
T 3e03_A           81 VAATVD------TFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAP-NPHILTLAPPPSL  153 (274)
T ss_dssp             HHHHHH------HHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSS-SCEEEECCCCCCC
T ss_pred             HHHHHH------HcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcC-CceEEEECChHhc
Confidence            999998      4578999999999864  445778999999999999999999999999998876 7999999999987


Q ss_pred             ccccccCCCccccccccccCCC--CChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCC-cccCCccccchhHH
Q 017812          207 NVFNAQVNNETITGKFFLRSKC--YPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG-VVKTNIMREVPSFL  283 (365)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG-~v~T~~~~~~~~~~  283 (365)
                                          .+  .++...|++||+|+++|++++++|++   +.||+||+|+|| +++|++.+..+.  
T Consensus       154 --------------------~~~~~~~~~~Y~asKaal~~l~~~la~e~~---~~gI~vn~v~PG~~v~T~~~~~~~~--  208 (274)
T 3e03_A          154 --------------------NPAWWGAHTGYTLAKMGMSLVTLGLAAEFG---PQGVAINALWPRTVIATDAINMLPG--  208 (274)
T ss_dssp             --------------------CHHHHHHCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEECSBCBCC-------C--
T ss_pred             --------------------CCCCCCCCchHHHHHHHHHHHHHHHHHHhh---hcCEEEEEEECCcccccchhhhccc--
Confidence                                44  56788999999999999999999998   889999999999 689998743321  


Q ss_pred             HHHHHHHHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCC
Q 017812          284 SLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKG  327 (365)
Q Consensus       284 ~~~~~~~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g  327 (365)
                              .+..++.+|+|+|+.+++++... ...+|+++. ++|
T Consensus       209 --------~~~~~~~~pedvA~~v~~l~s~~~~~itG~~i~-~~g  244 (274)
T 3e03_A          209 --------VDAAACRRPEIMADAAHAVLTREAAGFHGQFLI-DDE  244 (274)
T ss_dssp             --------CCGGGSBCTHHHHHHHHHHHTSCCTTCCSCEEE-HHH
T ss_pred             --------ccccccCCHHHHHHHHHHHhCccccccCCeEEE-cCc
Confidence                    12235679999999999655332 356899984 444

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=100.00  E-value=9.3e-42  Score=309.55  Aligned_cols=241  Identities=19%  Similarity=0.244  Sum_probs=199.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecC-chhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRS-SHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      +++||+++||||++|||+++|++|+++|++|++++|+ .+..+++.+++.+.  +.++.++++|++|.++++++++++.+
T Consensus        26 ~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~  103 (271)
T 4iin_A           26 QFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEK--GYKAAVIKFDAASESDFIEAIQTIVQ  103 (271)
T ss_dssp             CCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999995 55566666666554  56889999999999999999999988


Q ss_pred             HHhccCCCCCeeEEEecCCcccC--CCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017812          135 WLLDSDMHSSIQLLINNAGILAT--SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~~--~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~  212 (365)
                            .++++|+||||||+..+  ..+.+.+++++++++|+.|++++++.++|.|++++ .|+||++||.++.      
T Consensus       104 ------~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~------  170 (271)
T 4iin_A          104 ------SDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSR-FGSVVNVASIIGE------  170 (271)
T ss_dssp             ------HHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHH------
T ss_pred             ------hcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcC-CCEEEEEechhhc------
Confidence                  45789999999998743  34678999999999999999999999999998876 6899999999988      


Q ss_pred             CCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHH
Q 017812          213 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLK  292 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~  292 (365)
                                    .+.++...|++||+|++.|+++++.|++   .+||+|++|+||+|+|++.+..+.... .......
T Consensus       171 --------------~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~v~~v~PG~v~T~~~~~~~~~~~-~~~~~~~  232 (271)
T 4iin_A          171 --------------RGNMGQTNYSASKGGMIAMSKSFAYEGA---LRNIRFNSVTPGFIETDMNANLKDELK-ADYVKNI  232 (271)
T ss_dssp             --------------HCCTTCHHHHHHHHHHHHHHHHHHHHHH---TTTEEEEEEEECSBCCC-------------CGGGC
T ss_pred             --------------CCCCCchHhHHHHHHHHHHHHHHHHHHH---HhCcEEEEEEeCcccCCchhhhcHHHH-HHHHhcC
Confidence                          7788899999999999999999999998   789999999999999999876543221 1112224


Q ss_pred             HhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017812          293 LLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  329 (365)
Q Consensus       293 ~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~  329 (365)
                      |++++.+|+|+|+++++++... ...+|+.+..|+|..
T Consensus       233 ~~~~~~~p~dvA~~i~~l~s~~~~~itG~~i~vdGG~~  270 (271)
T 4iin_A          233 PLNRLGSAKEVAEAVAFLLSDHSSYITGETLKVNGGLY  270 (271)
T ss_dssp             TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSC
T ss_pred             CcCCCcCHHHHHHHHHHHhCCCcCCCcCCEEEeCCCee
Confidence            6678899999999999655432 356899999998864

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=100.00  E-value=7.1e-42  Score=313.84  Aligned_cols=242  Identities=20%  Similarity=0.206  Sum_probs=201.3

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCc--hhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHH
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS--HLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  132 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~  132 (365)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.  +..+++.+.+.+.  +.++.++++|++|+++++++++++
T Consensus        45 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~  122 (294)
T 3r3s_A           45 GRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEEC--GRKAVLLPGDLSDESFARSLVHKA  122 (294)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHT--TCCEEECCCCTTSHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHc--CCcEEEEEecCCCHHHHHHHHHHH
Confidence            467899999999999999999999999999999999973  4455666665554  567899999999999999999999


Q ss_pred             HHHHhccCCCCCeeEEEecCCccc---CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccc
Q 017812          133 QQWLLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVF  209 (365)
Q Consensus       133 ~~~~~~~~~~~~id~lv~nAG~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~  209 (365)
                      .+      .++++|+||||||+..   +..+.+.++|++++++|+.|+++++++++|+|++   .|+||++||.++.   
T Consensus       123 ~~------~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~---~g~Iv~isS~~~~---  190 (294)
T 3r3s_A          123 RE------ALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPK---GASIITTSSIQAY---  190 (294)
T ss_dssp             HH------HHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCT---TCEEEEECCGGGT---
T ss_pred             HH------HcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc---CCEEEEECChhhc---
Confidence            88      4578999999999853   3457899999999999999999999999999965   4899999999998   


Q ss_pred             cccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc-hhHHHHHHH
Q 017812          210 NAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV-PSFLSLMAF  288 (365)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~-~~~~~~~~~  288 (365)
                                       .+.++...|++||+|+++|+++++.|++   +.||+||+|+||+|+|++.... .........
T Consensus       191 -----------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~  250 (294)
T 3r3s_A          191 -----------------QPSPHLLDYAATKAAILNYSRGLAKQVA---EKGIRVNIVAPGPIWTALQISGGQTQDKIPQF  250 (294)
T ss_dssp             -----------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEECSBCSHHHHTTTSCGGGSTTT
T ss_pred             -----------------cCCCCchHHHHHHHHHHHHHHHHHHHHh---hcCeEEEEEecCcCccccccccCCCHHHHHHH
Confidence                             7888899999999999999999999998   7899999999999999984221 100001111


Q ss_pred             HHHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017812          289 TVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  330 (365)
Q Consensus       289 ~~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~  330 (365)
                      ....|++|+.+|+|+|+++++++... ...+|+.+.+|+|..+
T Consensus       251 ~~~~p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~l  293 (294)
T 3r3s_A          251 GQQTPMKRAGQPAELAPVYVYLASQESSYVTAEVHGVCGGEHL  293 (294)
T ss_dssp             TTTSTTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred             HhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCccC
Confidence            22346788999999999999544322 3568999999999764

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=1.4e-41  Score=309.80  Aligned_cols=245  Identities=23%  Similarity=0.288  Sum_probs=204.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcC-CCceEEEEecCCChhhHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNK-DARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.++++++.+++...+. +.++.++++|++|+++++++++++.+
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   82 (280)
T 1xkq_A            3 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK   82 (280)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999999999888888866421 12789999999999999999999988


Q ss_pred             HHhccCCCCCeeEEEecCCcccC------CCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccc
Q 017812          135 WLLDSDMHSSIQLLINNAGILAT------SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNV  208 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~~------~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~  208 (365)
                            .++++|+||||||+..+      ..+.+.+++++++++|+.|+++++++++|.|.+++  |+||++||.++.  
T Consensus        83 ------~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--g~iv~isS~~~~--  152 (280)
T 1xkq_A           83 ------QFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK--GEIVNVSSIVAG--  152 (280)
T ss_dssp             ------HHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCGGGS--
T ss_pred             ------hcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC--CcEEEecCcccc--
Confidence                  45789999999998643      44678999999999999999999999999998754  899999999887  


Q ss_pred             ccccCCCccccccccccCCCC-ChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc--hhHH--
Q 017812          209 FNAQVNNETITGKFFLRSKCY-PCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV--PSFL--  283 (365)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~-~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~--~~~~--  283 (365)
                                        .+. ++...|++||+|++.|+++++.|++   +.||+||+|+||+|+|++.+..  +...  
T Consensus       153 ------------------~~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~  211 (280)
T 1xkq_A          153 ------------------PQAQPDFLYYAIAKAALDQYTRSTAIDLA---KFGIRVNSVSPGMVETGFTNAMGMPDQASQ  211 (280)
T ss_dssp             ------------------SSCCCSSHHHHHHHHHHHHHHHHHHHHHH---TTTCEEEEEEECCBCSSHHHHTTCCHHHHH
T ss_pred             ------------------CCCCCcccHHHHHHHHHHHHHHHHHHHhc---cCCeEEEEEeeCcCcCCccccccccccccc
Confidence                              555 7788999999999999999999998   7899999999999999987643  1110  


Q ss_pred             HHHHH----HHHHHhcCCCCHHHHHHHHHHHhcC--CCCCcccEEeCCCCcccc
Q 017812          284 SLMAF----TVLKLLGLLQSPEKGINSVLDAALA--PPETSGVYFFGGKGRTVN  331 (365)
Q Consensus       284 ~~~~~----~~~~~~~~~~~p~e~A~~i~~~~l~--~~~~~G~~~~~~~g~~~~  331 (365)
                      .....    ....|++++.+|+|+|+.+++++..  +...+|+.+..++|....
T Consensus       212 ~~~~~~~~~~~~~p~~~~~~pedvA~~v~~l~s~~~~~~~tG~~i~vdgG~~~~  265 (280)
T 1xkq_A          212 KFYNFMASHKECIPIGAAGKPEHIANIILFLADRNLSFYILGQSIVADGGTSLV  265 (280)
T ss_dssp             HHHHHHHHCTTTCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC
T ss_pred             chHHHHHHHHcCCCCCCCCCHHHHHHHHHHhcCcccccCccCCeEEECCCcccc
Confidence            00001    1113567889999999999965533  225689999999997654

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=100.00  E-value=1.3e-41  Score=304.73  Aligned_cols=238  Identities=22%  Similarity=0.266  Sum_probs=191.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCc-hhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS-HLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      ++++|+++||||++|||+++|++|+++|++|++++|+. +++++   ++.+.  +.++.++++|++|+++++++++++.+
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~   78 (249)
T 2ew8_A            4 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA---AIRNL--GRRVLTVKCDVSQPGDVEAFGKQVIS   78 (249)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH---HHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH---HHHhc--CCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            36799999999999999999999999999999999998 66654   33332  45789999999999999999999988


Q ss_pred             HHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017812          135 WLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~  212 (365)
                            .++++|+||||||+..  +..+.+.+++++++++|+.|+++++++++|.|++++ .|+||++||.++.      
T Consensus        79 ------~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~------  145 (249)
T 2ew8_A           79 ------TFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNG-WGRIINLTSTTYW------  145 (249)
T ss_dssp             ------HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGG------
T ss_pred             ------HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CeEEEEEcchhhc------
Confidence                  4578999999999863  345778999999999999999999999999998765 6899999999988      


Q ss_pred             CCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccc-cchhH-HHHHHHHH
Q 017812          213 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMR-EVPSF-LSLMAFTV  290 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~-~~~~~-~~~~~~~~  290 (365)
                                    .+.++...|++||++++.|+++++.|++   +.||+||+|+||+|+|++.+ ..... ........
T Consensus       146 --------------~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~  208 (249)
T 2ew8_A          146 --------------LKIEAYTHYISTKAANIGFTRALASDLG---KDGITVNAIAPSLVRTATTEASALSAMFDVLPNML  208 (249)
T ss_dssp             --------------SCCSSCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECCC------------------CTT
T ss_pred             --------------cCCCCchhHHHHHHHHHHHHHHHHHHHH---hcCcEEEEEecCcCcCccchhccccchhhHHHHhh
Confidence                          6778889999999999999999999998   78999999999999999876 33211 00000000


Q ss_pred             HHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017812          291 LKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  329 (365)
Q Consensus       291 ~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~  329 (365)
                       .|++++.+|+|+|+.+++++... ...+|+.+..++|..
T Consensus       209 -~~~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdGG~~  247 (249)
T 2ew8_A          209 -QAIPRLQVPLDLTGAAAFLASDDASFITGQTLAVDGGMV  247 (249)
T ss_dssp             -SSSCSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESSSCC
T ss_pred             -CccCCCCCHHHHHHHHHHHcCcccCCCCCcEEEECCCcc
Confidence             35678899999999999544321 256899999898854

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=100.00  E-value=8.2e-41  Score=299.23  Aligned_cols=224  Identities=25%  Similarity=0.395  Sum_probs=192.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.++++++.+++...  +.++.++++|++|+++++++++++.+ 
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~-   80 (247)
T 2jah_A            4 ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAA--GAKVHVLELDVADRQGVDAAVASTVE-   80 (247)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHH-
Confidence            378999999999999999999999999999999999999999888888764  45789999999999999999999988 


Q ss_pred             HhccCCCCCeeEEEecCCcc--cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                           .++++|+||||||+.  .+..+.+.+++++++++|+.|+++++++++|+|++++  |+||++||.++.       
T Consensus        81 -----~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--g~iv~isS~~~~-------  146 (247)
T 2jah_A           81 -----ALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK--GTVVQMSSIAGR-------  146 (247)
T ss_dssp             -----HHSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCGGGT-------
T ss_pred             -----HcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC--CEEEEEccHHhc-------
Confidence                 457899999999986  3456789999999999999999999999999998764  899999999988       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  293 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  293 (365)
                                   .+.++...|++||+|+++|+++++.|++   +.||+||+|+||+++|++......... .......|
T Consensus       147 -------------~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~v~~v~PG~v~T~~~~~~~~~~~-~~~~~~~~  209 (247)
T 2jah_A          147 -------------VNVRNAAVYQATKFGVNAFSETLRQEVT---ERGVRVVVIEPGTTDTELRGHITHTAT-KEMYEQRI  209 (247)
T ss_dssp             -------------CCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEECSBSSSGGGGCCCHHH-HHHHHHHT
T ss_pred             -------------CCCCCCcHHHHHHHHHHHHHHHHHHHhc---ccCcEEEEEECCCCCCcchhcccchhh-HHHHHhcc
Confidence                         7778889999999999999999999998   789999999999999999765432111 11111123


Q ss_pred             hcCC--CCHHHHHHHHHHHhcCC
Q 017812          294 LGLL--QSPEKGINSVLDAALAP  314 (365)
Q Consensus       294 ~~~~--~~p~e~A~~i~~~~l~~  314 (365)
                       +++  .+|+|+|+.+++++..+
T Consensus       210 -~~~~~~~pedvA~~v~~l~s~~  231 (247)
T 2jah_A          210 -SQIRKLQAQDIAEAVRYAVTAP  231 (247)
T ss_dssp             -TTSCCBCHHHHHHHHHHHHHSC
T ss_pred             -cccCCCCHHHHHHHHHHHhCCC
Confidence             555  89999999999766443

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=100.00  E-value=5.3e-41  Score=306.17  Aligned_cols=242  Identities=17%  Similarity=0.200  Sum_probs=206.8

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHH
Q 017812           54 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  133 (365)
Q Consensus        54 ~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~  133 (365)
                      +.+++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++     +.++.++++|++|.++++++++++ 
T Consensus        25 ~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~~-   98 (281)
T 3ppi_A           25 IKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL-----GNRAEFVSTNVTSEDSVLAAIEAA-   98 (281)
T ss_dssp             CGGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHH-
T ss_pred             hhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh-----CCceEEEEcCCCCHHHHHHHHHHH-
Confidence            45689999999999999999999999999999999999999998888877     457899999999999999999988 


Q ss_pred             HHHhccCCCCCeeEEEec-CCcccCC-------CCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcC-----CCCCeEEEE
Q 017812          134 QWLLDSDMHSSIQLLINN-AGILATS-------SRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNS-----PVPSRIVNV  200 (365)
Q Consensus       134 ~~~~~~~~~~~id~lv~n-AG~~~~~-------~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~-----~~~g~iV~v  200 (365)
                      +      .++++|++||| ||+....       .+.+.+++++++++|+.|++++++.++|.|.+.     +..|+||++
T Consensus        99 ~------~~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~i  172 (281)
T 3ppi_A           99 N------QLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLT  172 (281)
T ss_dssp             T------TSSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEE
T ss_pred             H------HhCCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEE
Confidence            5      56899999999 5553221       257889999999999999999999999999862     236899999


Q ss_pred             cCCcccccccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccch
Q 017812          201 TSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP  280 (365)
Q Consensus       201 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~  280 (365)
                      ||.++.                    .+.++...|++||+|+++|+++|+.|++   +.||+|++|+||+|+|++.+...
T Consensus       173 sS~~~~--------------------~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gi~v~~v~PG~v~T~~~~~~~  229 (281)
T 3ppi_A          173 ASIAGY--------------------EGQIGQTAYAAAKAGVIGLTIAAARDLS---SAGIRVNTIAPGTMKTPIMESVG  229 (281)
T ss_dssp             CCGGGT--------------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCCHHHHTTC
T ss_pred             eccccc--------------------CCCCCCcccHHHHHHHHHHHHHHHHHHh---hcCeEEEEEecCcCCchhhhccc
Confidence            999998                    7888899999999999999999999998   78999999999999999987754


Q ss_pred             hHHHHHHHHHHHHh-cCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccccC
Q 017812          281 SFLSLMAFTVLKLL-GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNS  332 (365)
Q Consensus       281 ~~~~~~~~~~~~~~-~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~~~  332 (365)
                      .... .......++ +++.+|+|+|+++++++. ++..+|+.+..++|..+.+
T Consensus       230 ~~~~-~~~~~~~~~~~~~~~pedvA~~v~~l~s-~~~~tG~~i~vdGG~~~~p  280 (281)
T 3ppi_A          230 EEAL-AKFAANIPFPKRLGTPDEFADAAAFLLT-NGYINGEVMRLDGAQRFTP  280 (281)
T ss_dssp             HHHH-HHHHHTCCSSSSCBCHHHHHHHHHHHHH-CSSCCSCEEEESTTCCCCC
T ss_pred             HHHH-HHHHhcCCCCCCCCCHHHHHHHHHHHHc-CCCcCCcEEEECCCcccCC
Confidence            4321 112222344 678899999999997664 4678999999999987754

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=100.00  E-value=5.8e-41  Score=306.97  Aligned_cols=246  Identities=20%  Similarity=0.195  Sum_probs=199.3

Q ss_pred             CCCCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCc-hhHHHHHHHHHhhcCCCceEEEEecCCC----hhhHH
Q 017812           52 PPITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS-HLLSETMADITSRNKDARLEAFQVDLSS----FQSVL  126 (365)
Q Consensus        52 ~~~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dls~----~~~v~  126 (365)
                      ++..++++|++|||||++|||+++|++|+++|++|++++|+. ++++++.+++.... +.++.++++|++|    .++++
T Consensus        16 ~~~~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~~~~~~~~~v~   94 (288)
T 2x9g_A           16 PRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKER-SNTAVVCQADLTNSNVLPASCE   94 (288)
T ss_dssp             ------CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSCSTTHHHHHH
T ss_pred             CCCcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhc-CCceEEEEeecCCccCCHHHHH
Confidence            445568999999999999999999999999999999999998 88888888886333 4578999999999    99999


Q ss_pred             HHHHHHHHHHhccCCCCCeeEEEecCCcccC--C-----CC-----CCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCC-
Q 017812          127 KFKDSLQQWLLDSDMHSSIQLLINNAGILAT--S-----SR-----LTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPV-  193 (365)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~id~lv~nAG~~~~--~-----~~-----~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~-  193 (365)
                      ++++++.+      .++++|+||||||+...  .     .+     .+.+++++++++|+.|++++++.++|.|++++. 
T Consensus        95 ~~~~~~~~------~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~  168 (288)
T 2x9g_A           95 EIINSCFR------AFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPN  168 (288)
T ss_dssp             HHHHHHHH------HHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC------
T ss_pred             HHHHHHHH------hcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCC
Confidence            99999988      45789999999998642  3     34     778999999999999999999999999987531 


Q ss_pred             ----CCeEEEEcCCcccccccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCC
Q 017812          194 ----PSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPG  269 (365)
Q Consensus       194 ----~g~iV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG  269 (365)
                          .|+||++||.++.                    .+.++...|++||+|+++|+++++.|++   +.||+||+|+||
T Consensus       169 ~~~~~g~iv~isS~~~~--------------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gI~vn~v~PG  225 (288)
T 2x9g_A          169 CTSSNLSIVNLCDAMVD--------------------QPCMAFSLYNMGKHALVGLTQSAALELA---PYGIRVNGVAPG  225 (288)
T ss_dssp             --CCCEEEEEECCTTTT--------------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEES
T ss_pred             CCCCCeEEEEEeccccc--------------------CCCCCCchHHHHHHHHHHHHHHHHHHhh---ccCeEEEEEEec
Confidence                4899999999988                    7788899999999999999999999998   789999999999


Q ss_pred             cccCCccccchhHHHHHHHHHHHHhcCC-CCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017812          270 VVKTNIMREVPSFLSLMAFTVLKLLGLL-QSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  330 (365)
Q Consensus       270 ~v~T~~~~~~~~~~~~~~~~~~~~~~~~-~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~  330 (365)
                      +|.|++ +..+..  ........|++++ .+|+|+|+.+++++... ...+|+++..++|..+
T Consensus       226 ~v~t~~-~~~~~~--~~~~~~~~p~~r~~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~  285 (288)
T 2x9g_A          226 VSLLPV-AMGEEE--KDKWRRKVPLGRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSL  285 (288)
T ss_dssp             SCSCCT-TSCHHH--HHHHHHTCTTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             cccCcc-ccChHH--HHHHHhhCCCCCCCCCHHHHHHHHHHHhCccccCccCCEEEECcchhh
Confidence            999999 422211  1112222466788 89999999999655432 3568999999998654

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=100.00  E-value=7.8e-41  Score=300.56  Aligned_cols=246  Identities=28%  Similarity=0.322  Sum_probs=208.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEE-ecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLV-GRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      .+++|+++||||++|||+++|++|+++|++|+++ .|+.+++++..+++...  +.++.++.+|++|.++++++++++.+
T Consensus         4 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (255)
T 3icc_A            4 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSN--GGSAFSIGANLESLHGVEALYSSLDN   81 (255)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhc--CCceEEEecCcCCHHHHHHHHHHHHH
Confidence            3679999999999999999999999999999885 77788888888888766  56789999999999999999999887


Q ss_pred             HHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017812          135 WLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~  212 (365)
                      .++.....+++|+||||||+..  +..+.+.+++++++++|+.|+++++++++|+|++   .|+||++||.++.      
T Consensus        82 ~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~~~iv~isS~~~~------  152 (255)
T 3icc_A           82 ELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD---NSRIINISSAATR------  152 (255)
T ss_dssp             HHHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE---EEEEEEECCGGGT------
T ss_pred             HhcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCC---CCEEEEeCChhhc------
Confidence            6543223457999999999863  3456789999999999999999999999999954   4799999999988      


Q ss_pred             CCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHH-HHHHHHH
Q 017812          213 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLS-LMAFTVL  291 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~-~~~~~~~  291 (365)
                                    .+.++...|++||+|+++|+++++.|+.   ++||+|++|+||+|+|++.+....... .......
T Consensus       153 --------------~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~  215 (255)
T 3icc_A          153 --------------ISLPDFIAYSMTKGAINTMTFTLAKQLG---ARGITVNAILPGFVKTDMNAELLSDPMMKQYATTI  215 (255)
T ss_dssp             --------------SCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEECCBCCSSSTTTTTSHHHHHHHHHT
T ss_pred             --------------cCCCCcchhHHhHHHHHHHHHHHHHHHH---hcCeEEEEEEEeeecccchhhhcccHHHHHhhhcc
Confidence                          7888899999999999999999999998   789999999999999999877543221 2223333


Q ss_pred             HHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017812          292 KLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  329 (365)
Q Consensus       292 ~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~  329 (365)
                      .+++++.+|+|+|+++++++... ...+|+.+..|+|..
T Consensus       216 ~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~vdgG~~  254 (255)
T 3icc_A          216 SAFNRLGEVEDIADTAAFLASPDSRWVTGQLIDVSGGSC  254 (255)
T ss_dssp             STTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSTT
T ss_pred             CCcCCCCCHHHHHHHHHHHhCcccCCccCCEEEecCCee
Confidence            56778999999999999655322 357899999999864

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=100.00  E-value=9e-41  Score=304.50  Aligned_cols=245  Identities=16%  Similarity=0.120  Sum_probs=205.6

Q ss_pred             CCCCCCCCCEEEEecCC--ChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHH
Q 017812           52 PPITGIKRPVCIVTGAT--SGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFK  129 (365)
Q Consensus        52 ~~~~~~~~k~vlITGas--sGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~  129 (365)
                      +.+.++++|++|||||+  +|||+++|++|+++|++|++++|+.  .++..+++.+..+  ++.++++|++|.+++++++
T Consensus        19 ~~M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~~~~--~~~~~~~Dl~~~~~v~~~~   94 (280)
T 3nrc_A           19 SHMGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCAEFN--PAAVLPCDVISDQEIKDLF   94 (280)
T ss_dssp             ---CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHGGGC--CSEEEECCTTCHHHHHHHH
T ss_pred             CcccccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--HHHHHHHHHHhcC--CceEEEeecCCHHHHHHHH
Confidence            44567899999999998  7899999999999999999999997  3455566655543  5889999999999999999


Q ss_pred             HHHHHHHhccCCCCCeeEEEecCCcccC------CCC-CCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcC
Q 017812          130 DSLQQWLLDSDMHSSIQLLINNAGILAT------SSR-LTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS  202 (365)
Q Consensus       130 ~~~~~~~~~~~~~~~id~lv~nAG~~~~------~~~-~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS  202 (365)
                      +++.+      .++++|+||||||+...      ..+ .+.+++++++++|+.++++++++++|+|.++  .|+||++||
T Consensus        95 ~~~~~------~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--~g~iv~isS  166 (280)
T 3nrc_A           95 VELGK------VWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNR--NASMVALTY  166 (280)
T ss_dssp             HHHHH------HCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT--TCEEEEEEC
T ss_pred             HHHHH------HcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC--CCeEEEEec
Confidence            99988      56899999999998643      223 7899999999999999999999999999876  499999999


Q ss_pred             CcccccccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH
Q 017812          203 FTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF  282 (365)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~  282 (365)
                      .++.                    .+.++...|++||+|+++|+++++.|++   +.||+|++|+||+|+|++.+.....
T Consensus       167 ~~~~--------------------~~~~~~~~Y~asKaal~~~~~~la~e~~---~~gi~v~~v~PG~v~T~~~~~~~~~  223 (280)
T 3nrc_A          167 IGAE--------------------KAMPSYNTMGVAKASLEATVRYTALALG---EDGIKVNAVSAGPIKTLAASGISNF  223 (280)
T ss_dssp             GGGT--------------------SCCTTTHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEECCCCCSGGGGCTTH
T ss_pred             cccc--------------------cCCCCchhhHHHHHHHHHHHHHHHHHHH---HcCcEEEEEeeccccchhhhcCcch
Confidence            9988                    7888999999999999999999999998   7899999999999999998876543


Q ss_pred             HH-HHHHHHHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcccc
Q 017812          283 LS-LMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVN  331 (365)
Q Consensus       283 ~~-~~~~~~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~~  331 (365)
                      .. ........|++++.+|+|+|+.+++++... ...+|+.+..|+|..+.
T Consensus       224 ~~~~~~~~~~~p~~~~~~pedvA~~v~~l~s~~~~~~tG~~i~vdgG~~~~  274 (280)
T 3nrc_A          224 KKMLDYNAMVSPLKKNVDIMEVGNTVAFLCSDMATGITGEVVHVDAGYHCV  274 (280)
T ss_dssp             HHHHHHHHHHSTTCSCCCHHHHHHHHHHTTSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCcccCCcCCcEEEECCCcccc
Confidence            22 222334456788999999999999433221 34689999999998763

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=100.00  E-value=1.4e-41  Score=307.42  Aligned_cols=236  Identities=21%  Similarity=0.251  Sum_probs=195.6

Q ss_pred             CCCCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHH
Q 017812           52 PPITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDS  131 (365)
Q Consensus        52 ~~~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~  131 (365)
                      +++.+++||++|||||++|||+++|++|+++|++|++++|+.+.++             ....+++|++|.+++++++++
T Consensus        21 ~~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~-------------~~~~~~~Dv~~~~~~~~~~~~   87 (266)
T 3uxy_A           21 QSMQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIA-------------ADLHLPGDLREAAYADGLPGA   87 (266)
T ss_dssp             -----CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSC-------------CSEECCCCTTSHHHHHHHHHH
T ss_pred             hhhhCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-------------hhhccCcCCCCHHHHHHHHHH
Confidence            3456789999999999999999999999999999999999876431             224558999999999999999


Q ss_pred             HHHHHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccc
Q 017812          132 LQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVF  209 (365)
Q Consensus       132 ~~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~  209 (365)
                      +.+      .++++|+||||||+..  +..+.+.++|++++++|+.|+++++++++|+|++++ .|+||++||.++.   
T Consensus        88 ~~~------~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~---  157 (266)
T 3uxy_A           88 VAA------GLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAG-GGAIVNVASCWGL---  157 (266)
T ss_dssp             HHH------HHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTT---
T ss_pred             HHH------hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHhC---
Confidence            988      4578999999999874  345789999999999999999999999999998876 6999999999988   


Q ss_pred             cccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH------H
Q 017812          210 NAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF------L  283 (365)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~------~  283 (365)
                                       .+.++..+|++||+|+++|+++++.|++   +.||+||+|+||+|+|++.+.....      .
T Consensus       158 -----------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~  217 (266)
T 3uxy_A          158 -----------------RPGPGHALYCLTKAALASLTQCMGMDHA---PQGIRINAVCPNEVNTPMLRTGFAKRGFDPDR  217 (266)
T ss_dssp             -----------------BCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEESSBCCHHHHHHHHHTTCCHHH
T ss_pred             -----------------CCCCCChHHHHHHHHHHHHHHHHHHHhh---hcCcEEEEEeeCCCcchHhhhhhhcccccchH
Confidence                             7888899999999999999999999998   7899999999999999987543211      1


Q ss_pred             HHHHHHHHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017812          284 SLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  330 (365)
Q Consensus       284 ~~~~~~~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~  330 (365)
                      .........|++++.+|+|+|+++++++... ...+|+.+.+|+|..+
T Consensus       218 ~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~  265 (266)
T 3uxy_A          218 AVAELGRTVPLGRIAEPEDIADVVLFLASDAARYLCGSLVEVNGGKAV  265 (266)
T ss_dssp             HHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred             HHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCcCCEEEECcCEeC
Confidence            1112223346778999999999999654332 3568999999998754

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=100.00  E-value=3.7e-41  Score=304.83  Aligned_cols=243  Identities=19%  Similarity=0.215  Sum_probs=206.2

Q ss_pred             CCCCCCEEEEecCC--ChHHHHHHHHHHHCCCEEEEEecCchhH-HHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHH
Q 017812           55 TGIKRPVCIVTGAT--SGLGAAAAYALSREGFHVVLVGRSSHLL-SETMADITSRNKDARLEAFQVDLSSFQSVLKFKDS  131 (365)
Q Consensus        55 ~~~~~k~vlITGas--sGIG~~~a~~la~~G~~Vil~~r~~~~~-~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~  131 (365)
                      .+++||+++||||+  +|||+++|++|+++|++|++++|+.+.. ++..+++.+.. +.++.++++|++|++++++++++
T Consensus        16 ~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~   94 (267)
T 3gdg_A           16 LSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTY-GIKAKAYKCQVDSYESCEKLVKD   94 (267)
T ss_dssp             HCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHH-CCCEECCBCCTTCHHHHHHHHHH
T ss_pred             cCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhc-CCceeEEecCCCCHHHHHHHHHH
Confidence            46889999999999  9999999999999999999999987655 67777776554 46899999999999999999999


Q ss_pred             HHHHHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccc
Q 017812          132 LQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVF  209 (365)
Q Consensus       132 ~~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~  209 (365)
                      +.+      .++++|+||||||+..  +..+.+.+++++++++|+.|+++++++++|+|++++ .|+||++||.++.   
T Consensus        95 ~~~------~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~---  164 (267)
T 3gdg_A           95 VVA------DFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERG-TGSLVITASMSGH---  164 (267)
T ss_dssp             HHH------HTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGT---
T ss_pred             HHH------HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcC-CceEEEEcccccc---
Confidence            988      5689999999999874  345779999999999999999999999999998876 6899999999887   


Q ss_pred             cccCCCccccccccccCCCC--ChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHH
Q 017812          210 NAQVNNETITGKFFLRSKCY--PCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMA  287 (365)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~--~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~  287 (365)
                                       .+.  ++...|++||+|+++|++++++|+.   +. |+||+|+||+|+|++.+..+.... ..
T Consensus       165 -----------------~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~-i~v~~v~PG~v~t~~~~~~~~~~~-~~  222 (267)
T 3gdg_A          165 -----------------IANFPQEQTSYNVAKAGCIHMARSLANEWR---DF-ARVNSISPGYIDTGLSDFVPKETQ-QL  222 (267)
T ss_dssp             -----------------SCCSSSCCHHHHHHHHHHHHHHHHHHHHTT---TT-CEEEEEEECCEECSCGGGSCHHHH-HH
T ss_pred             -----------------ccCCCCCCCcchHHHHHHHHHHHHHHHHhc---cC-cEEEEEECCccccchhhhCCHHHH-HH
Confidence                             333  5678999999999999999999997   55 999999999999999876644322 22


Q ss_pred             HHHHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017812          288 FTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  330 (365)
Q Consensus       288 ~~~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~  330 (365)
                      .....|++|+.+|+|+|+++++++... ...+|+.+..|+|...
T Consensus       223 ~~~~~~~~r~~~~~dva~~~~~l~s~~~~~itG~~i~vdgG~~~  266 (267)
T 3gdg_A          223 WHSMIPMGRDGLAKELKGAYVYFASDASTYTTGADLLIDGGYTT  266 (267)
T ss_dssp             HHTTSTTSSCEETHHHHHHHHHHHSTTCTTCCSCEEEESTTGGG
T ss_pred             HHhcCCCCCCcCHHHHHhHhheeecCccccccCCEEEECCceec
Confidence            233457788899999999999655332 3568999999998754

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=100.00  E-value=6.2e-41  Score=303.48  Aligned_cols=242  Identities=17%  Similarity=0.177  Sum_probs=204.1

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEE-EecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHH
Q 017812           54 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVL-VGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  132 (365)
Q Consensus        54 ~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil-~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~  132 (365)
                      ..++.+|++|||||++|||+++|++|+++|++|++ ..|+.+++++..+++.+.  +.++.++.+|++|+++++++++++
T Consensus        21 ~~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~   98 (267)
T 4iiu_A           21 QSNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVAN--GGNGRLLSFDVANREQCREVLEHE   98 (267)
T ss_dssp             ----CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHH
Confidence            34578999999999999999999999999999966 567788888888888776  457899999999999999999999


Q ss_pred             HHHHhccCCCCCeeEEEecCCcccC--CCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc
Q 017812          133 QQWLLDSDMHSSIQLLINNAGILAT--SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN  210 (365)
Q Consensus       133 ~~~~~~~~~~~~id~lv~nAG~~~~--~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~  210 (365)
                      .+      .++++|+||||||+..+  ..+.+.+++++++++|+.|++.+++.++|.|.+.+..|+||++||.++.    
T Consensus        99 ~~------~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~----  168 (267)
T 4iiu_A           99 IA------QHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGV----  168 (267)
T ss_dssp             HH------HHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHH----
T ss_pred             HH------HhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhc----
Confidence            88      45789999999998743  4577999999999999999999999999988633336999999999988    


Q ss_pred             ccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHH
Q 017812          211 AQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTV  290 (365)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~  290 (365)
                                      .+.++...|++||+|+++|+++++.|++   +.||+|++|+||+|+|++.+..+...  .....
T Consensus       169 ----------------~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gi~v~~v~PG~v~t~~~~~~~~~~--~~~~~  227 (267)
T 4iiu_A          169 ----------------MGNRGQVNYSAAKAGIIGATKALAIELA---KRKITVNCIAPGLIDTGMIEMEESAL--KEAMS  227 (267)
T ss_dssp             ----------------HCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCSTTCCCCHHHH--HHHHH
T ss_pred             ----------------cCCCCCchhHHHHHHHHHHHHHHHHHHh---hcCeEEEEEEEeeecCCcccccHHHH--HHHHh
Confidence                            7778899999999999999999999998   78999999999999999987663322  22233


Q ss_pred             HHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCc
Q 017812          291 LKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  328 (365)
Q Consensus       291 ~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~  328 (365)
                      ..|++++.+|+|+|+.+++++... ...+|+.+..|+|.
T Consensus       228 ~~p~~~~~~~edva~~~~~L~s~~~~~itG~~i~vdGG~  266 (267)
T 4iiu_A          228 MIPMKRMGQAEEVAGLASYLMSDIAGYVTRQVISINGGM  266 (267)
T ss_dssp             TCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             cCCCCCCcCHHHHHHHHHHHhCCcccCccCCEEEeCCCc
Confidence            456778999999999999655332 35789999988874

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=100.00  E-value=6.6e-41  Score=301.26  Aligned_cols=239  Identities=22%  Similarity=0.256  Sum_probs=199.1

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      +++|+++||||++|||+++|++|+++|++|++++|+.+  ++..+++...  +.++.++.+|++|+++++++++++.+  
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~--   75 (255)
T 2q2v_A            2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARH--GVKAVHHPADLSDVAQIEALFALAER--   75 (255)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTT--SCCEEEECCCTTSHHHHHHHHHHHHH--
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHhc--CCceEEEeCCCCCHHHHHHHHHHHHH--
Confidence            67899999999999999999999999999999999877  5556666543  45788999999999999999999988  


Q ss_pred             hccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017812          137 LDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  214 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~  214 (365)
                          .++++|+||||||+..  +..+.+.+++++++++|+.|+++++++++|.|++++ .|+||++||.++.        
T Consensus        76 ----~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~--------  142 (255)
T 2q2v_A           76 ----EFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARN-WGRIINIASVHGL--------  142 (255)
T ss_dssp             ----HHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGT--------
T ss_pred             ----HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcCchhc--------
Confidence                4578999999999863  345678999999999999999999999999998875 6899999999988        


Q ss_pred             CccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH-HHH--------
Q 017812          215 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF-LSL--------  285 (365)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~-~~~--------  285 (365)
                                  .+.++...|++||+++++|+++++.|++   +.||+||+|+||+|.|++.+..... ...        
T Consensus       143 ------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~  207 (255)
T 2q2v_A          143 ------------VGSTGKAAYVAAKHGVVGLTKVVGLETA---TSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQ  207 (255)
T ss_dssp             ------------SCCTTBHHHHHHHHHHHHHHHHHHHHTT---TSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHH
T ss_pred             ------------cCCCCchhHHHHHHHHHHHHHHHHHHhc---ccCcEEEEEeeCCCcCcchhhhcccccccccchHHHH
Confidence                        6778889999999999999999999998   7899999999999999986543210 000        


Q ss_pred             HHH-HHHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017812          286 MAF-TVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  329 (365)
Q Consensus       286 ~~~-~~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~  329 (365)
                      ... ....|++++.+|+|+|+.+++++... ...+|+.+..++|..
T Consensus       208 ~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~~  253 (255)
T 2q2v_A          208 HDLLAEKQPSLAFVTPEHLGELVLFLCSEAGSQVRGAAWNVDGGWL  253 (255)
T ss_dssp             HHHHTTTCTTCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHhccCCCCCCcCHHHHHHHHHHHhCCccCCCCCCEEEECCCcc
Confidence            001 11235678899999999999554322 245799999898864

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=6.3e-41  Score=301.57  Aligned_cols=238  Identities=25%  Similarity=0.270  Sum_probs=198.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.++ +++.+++.      + .++++|++|+++++++++++.+ 
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~------~-~~~~~D~~~~~~~~~~~~~~~~-   73 (256)
T 2d1y_A            3 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIG------G-AFFQVDLEDERERVRFVEEAAY-   73 (256)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHT------C-EEEECCTTCHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhh------C-CEEEeeCCCHHHHHHHHHHHHH-
Confidence            4789999999999999999999999999999999999887 66665552      3 7899999999999999999987 


Q ss_pred             HhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                           .++++|+||||||+..  +..+.+.+++++++++|+.|+++++++++|.|++++ .|+||++||.++.       
T Consensus        74 -----~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~-------  140 (256)
T 2d1y_A           74 -----ALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVG-GGAIVNVASVQGL-------  140 (256)
T ss_dssp             -----HHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEECCGGGT-------
T ss_pred             -----HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcccccc-------
Confidence                 4578999999999863  345778999999999999999999999999998875 6899999999987       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc----h-hHHHHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV----P-SFLSLMAF  288 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~----~-~~~~~~~~  288 (365)
                                   .+.++...|++||++++.|+++++.|++   +.||+||+|+||+++|++....    . ........
T Consensus       141 -------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~  204 (256)
T 2d1y_A          141 -------------FAEQENAAYNASKGGLVNLTRSLALDLA---PLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDW  204 (256)
T ss_dssp             -------------SBCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCCHHHHHHHC--------CHHH
T ss_pred             -------------CCCCCChhHHHHHHHHHHHHHHHHHHHh---hcCeEEEEEeeCCccCchhhhccccccCCHHHHHHH
Confidence                         6778889999999999999999999998   7899999999999999986432    1 00000111


Q ss_pred             HHHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcccc
Q 017812          289 TVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVN  331 (365)
Q Consensus       289 ~~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~~  331 (365)
                      ....|++++.+|+|+|+++++++... ...+|+.+..++|....
T Consensus       205 ~~~~~~~~~~~~~dvA~~~~~l~s~~~~~~~G~~~~v~gG~~~~  248 (256)
T 2d1y_A          205 EDLHALRRLGKPEEVAEAVLFLASEKASFITGAILPVDGGMTAS  248 (256)
T ss_dssp             HTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGB
T ss_pred             HhcCCCCCCcCHHHHHHHHHHHhCchhcCCCCCEEEECCCcccc
Confidence            12235678899999999999655332 25689999999997653

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=7.7e-42  Score=311.53  Aligned_cols=229  Identities=21%  Similarity=0.259  Sum_probs=188.2

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.. +..+.++++|++|+++++++++++.+
T Consensus        29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~  107 (281)
T 4dry_A           29 GSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRT-GNIVRAVVCDVGDPDQVAALFAAVRA  107 (281)
T ss_dssp             -----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-SSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-CCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999999999999887664 33468999999999999999999988


Q ss_pred             HHhccCCCCCeeEEEecCCcc---cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCC-CCCeEEEEcCCccccccc
Q 017812          135 WLLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP-VPSRIVNVTSFTHRNVFN  210 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~---~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~-~~g~iV~vsS~~~~~~~~  210 (365)
                            .++++|+||||||+.   .+..+.+.++|++++++|+.|+++++++++|.|++++ ..|+||++||.++.    
T Consensus       108 ------~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~----  177 (281)
T 4dry_A          108 ------EFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQ----  177 (281)
T ss_dssp             ------HHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGT----
T ss_pred             ------HcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhC----
Confidence                  458899999999986   3456789999999999999999999999999998764 25899999999988    


Q ss_pred             ccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHH
Q 017812          211 AQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTV  290 (365)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~  290 (365)
                                      .+.++...|++||+|+++|+++++.|++   +.||+||+|+||+|+|++.+........  ...
T Consensus       178 ----------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gI~vn~v~PG~v~T~~~~~~~~~~~~--~~~  236 (281)
T 4dry_A          178 ----------------TPRPNSAPYTATKHAITGLTKSTALDGR---MHDIACGQIDIGNAATDMTARMSTGVLQ--ANG  236 (281)
T ss_dssp             ----------------CCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEEECBCC-------CEEEC--TTS
T ss_pred             ----------------CCCCCChhHHHHHHHHHHHHHHHHHHhc---ccCeEEEEEEECcCcChhhhhhcchhhh--hhh
Confidence                            7888999999999999999999999998   8899999999999999997654321100  001


Q ss_pred             HHHhcCCCCHHHHHHHHHHHhcCCC
Q 017812          291 LKLLGLLQSPEKGINSVLDAALAPP  315 (365)
Q Consensus       291 ~~~~~~~~~p~e~A~~i~~~~l~~~  315 (365)
                      ..+.+++.+|||+|+++++++..+.
T Consensus       237 ~~~~~~~~~pedvA~~v~fL~s~~~  261 (281)
T 4dry_A          237 EVAAEPTIPIEHIAEAVVYMASLPL  261 (281)
T ss_dssp             CEEECCCBCHHHHHHHHHHHHHSCT
T ss_pred             cccccCCCCHHHHHHHHHHHhCCCc
Confidence            1234577899999999997665544

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=4.9e-41  Score=305.88  Aligned_cols=247  Identities=21%  Similarity=0.290  Sum_probs=197.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhh-cCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSR-NKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~-~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.++++++.+++... ..+.++.++++|++|+++++++++++.+
T Consensus         3 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (278)
T 1spx_A            3 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   82 (278)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHH
Confidence            467999999999999999999999999999999999999988888887432 1245789999999999999999999988


Q ss_pred             HHhccCCCCCeeEEEecCCccc--CCCCC----CHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc-cc
Q 017812          135 WLLDSDMHSSIQLLINNAGILA--TSSRL----TPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH-RN  207 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~--~~~~~----~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~-~~  207 (365)
                            .++++|+||||||+..  +..+.    +.+++++++++|+.|+++++++++|.|++++  |+||++||.++ . 
T Consensus        83 ------~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--g~iv~isS~~~~~-  153 (278)
T 1spx_A           83 ------KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK--GEIVNISSIASGL-  153 (278)
T ss_dssp             ------HHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCTTSSS-
T ss_pred             ------HcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC--CeEEEEecccccc-
Confidence                  4578999999999863  33455    8999999999999999999999999998754  89999999988 6 


Q ss_pred             cccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccch--hHHH-
Q 017812          208 VFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP--SFLS-  284 (365)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~--~~~~-  284 (365)
                                         .+.++...|++||++++.|+++++.|++   +.||+||+|+||+|.|++.....  .... 
T Consensus       154 -------------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~  211 (278)
T 1spx_A          154 -------------------HATPDFPYYSIAKAAIDQYTRNTAIDLI---QHGIRVNSISPGLVATGFGSAMGMPEETSK  211 (278)
T ss_dssp             -------------------SCCTTSHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEECCBCCCC------------
T ss_pred             -------------------cCCCCccHHHHHHHHHHHHHHHHHHHHH---hcCcEEEEEecCcccCccccccccCchhhh
Confidence                               6677889999999999999999999998   78999999999999999875421  1000 


Q ss_pred             -----HHHHHHHHHhcCCCCHHHHHHHHHHHhcCCC-C-CcccEEeCCCCccccCC
Q 017812          285 -----LMAFTVLKLLGLLQSPEKGINSVLDAALAPP-E-TSGVYFFGGKGRTVNSS  333 (365)
Q Consensus       285 -----~~~~~~~~~~~~~~~p~e~A~~i~~~~l~~~-~-~~G~~~~~~~g~~~~~~  333 (365)
                           ........|++++.+|+|+|+.+++++.... . .+|+.+..++|......
T Consensus       212 ~~~~~~~~~~~~~p~~~~~~~~dvA~~v~~l~s~~~~~~~tG~~~~vdgG~~~~~~  267 (278)
T 1spx_A          212 KFYSTMATMKECVPAGVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSSLIMG  267 (278)
T ss_dssp             --HHHHHHHHHHCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC--
T ss_pred             hhhHHHHHHHhcCCCcCCCCHHHHHHHHHHHcCccccCcccCcEEEECCCcccccC
Confidence                 1111222356788999999999996543222 3 68999999999876433

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=100.00  E-value=1.3e-40  Score=309.97  Aligned_cols=244  Identities=20%  Similarity=0.198  Sum_probs=202.9

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEe-cCchhHHHHHHHHHhhcCCCceEEEEecCCChh---------
Q 017812           54 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVG-RSSHLLSETMADITSRNKDARLEAFQVDLSSFQ---------  123 (365)
Q Consensus        54 ~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~---------  123 (365)
                      +.++++|++|||||++|||+++|++|+++|++|++++ |+.++++++.+++.... +.++.++++|++|.+         
T Consensus        41 m~~l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~  119 (328)
T 2qhx_A           41 MTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARR-PNSAITVQADLSNVATAPVSGADG  119 (328)
T ss_dssp             ----CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSSSCBCC------
T ss_pred             ccccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhc-CCeEEEEEeeCCCchhcccccccc
Confidence            3447899999999999999999999999999999999 99999998888886333 457899999999999         


Q ss_pred             --------hHHHHHHHHHHHHhccCCCCCeeEEEecCCccc--CCCCCC--------------HHHHhHhHHHHhHHHHH
Q 017812          124 --------SVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLT--------------PEGYDQMMSTNYIGAFF  179 (365)
Q Consensus       124 --------~v~~~~~~~~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~--------------~~~~~~~~~vN~~~~~~  179 (365)
                              +++++++++.+      .++++|+||||||+..  +..+.+              .+++++++++|+.|+++
T Consensus       120 ~~~~~~~~~v~~~~~~~~~------~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~  193 (328)
T 2qhx_A          120 SAPVTLFTRCAELVAACYT------HWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYF  193 (328)
T ss_dssp             -CCBCHHHHHHHHHHHHHH------HHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHH
T ss_pred             ccccccHHHHHHHHHHHHH------hcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHH
Confidence                    99999999988      4578999999999863  344566              89999999999999999


Q ss_pred             HHHHHhHhhhcCCC-----CCeEEEEcCCcccccccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhC
Q 017812          180 LTKLLLPLLKNSPV-----PSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLG  254 (365)
Q Consensus       180 l~~~~l~~~~~~~~-----~g~iV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~  254 (365)
                      ++++++|.|.+++.     .|+||++||.++.                    .+.++...|++||+|+++|+++|+.|++
T Consensus       194 l~~~~~~~m~~~~~~~~~~~g~IV~isS~~~~--------------------~~~~~~~~Y~asKaal~~l~~~la~el~  253 (328)
T 2qhx_A          194 LIKAFAHRVAGTPAKHRGTNYSIINMVDAMTN--------------------QPLLGYTIYTMAKGALEGLTRSAALELA  253 (328)
T ss_dssp             HHHHHHHHHHHSCGGGSCSCEEEEEECCTTTT--------------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             HHHHHHHHHHhcCCcCCCCCcEEEEECchhhc--------------------cCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999986531     4899999999988                    7778889999999999999999999998


Q ss_pred             CCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhc-CCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017812          255 LDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLG-LLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  330 (365)
Q Consensus       255 ~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~-~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~  330 (365)
                         +.||+||+|+||+|+|++ ...+...  .......|++ ++.+|+|+|+++++++... ...+|+++..++|..+
T Consensus       254 ---~~gIrvn~v~PG~v~T~~-~~~~~~~--~~~~~~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~  325 (328)
T 2qhx_A          254 ---PLQIRVNGVGPGLSVLVD-DMPPAVW--EGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL  325 (328)
T ss_dssp             ---GGTEEEEEEEESSBSCCC-CSCHHHH--HHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             ---hcCcEEEEEecCcccCCc-cccHHHH--HHHHhhCCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCCccc
Confidence               789999999999999999 5443211  1112224667 8899999999999665422 3568999999998654

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=100.00  E-value=1e-41  Score=306.40  Aligned_cols=240  Identities=21%  Similarity=0.215  Sum_probs=201.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.++++++.+++     +.++.++++|++|+++++++++++.+ 
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~-   75 (254)
T 1hdc_A            2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL-----GDAARYQHLDVTIEEDWQRVVAYARE-   75 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-----GGGEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceeEEEecCCCHHHHHHHHHHHHH-
Confidence            467999999999999999999999999999999999998887766655     34688999999999999999999988 


Q ss_pred             HhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                           .++++|+||||||+..  +..+.+.+++++++++|+.|++++++.++|.|++++ .|+||++||.++.       
T Consensus        76 -----~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~-------  142 (254)
T 1hdc_A           76 -----EFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAG-GGSIVNISSAAGL-------  142 (254)
T ss_dssp             -----HHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT-------
T ss_pred             -----HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhc-------
Confidence                 4578999999999864  345778999999999999999999999999998765 6899999999988       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  293 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  293 (365)
                                   .+.++...|++||++++.|+++++.|++   ++||+||+|+||++.|++.+..+.... .......|
T Consensus       143 -------------~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~-~~~~~~~p  205 (254)
T 1hdc_A          143 -------------MGLALTSSYGASKWGVRGLSKLAAVELG---TDRIRVNSVHPGMTYTPMTAETGIRQG-EGNYPNTP  205 (254)
T ss_dssp             -------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCCHHHHHHTCCCS-TTSCTTST
T ss_pred             -------------cCCCCchhHHHHHHHHHHHHHHHHHHhh---hcCeEEEEEecccCcCccccccchhHH-HHHHhcCC
Confidence                         6778889999999999999999999998   789999999999999998653211000 00001135


Q ss_pred             hcCCC-CHHHHHHHHHHHhcCC-CCCcccEEeCCCCcccc
Q 017812          294 LGLLQ-SPEKGINSVLDAALAP-PETSGVYFFGGKGRTVN  331 (365)
Q Consensus       294 ~~~~~-~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~~  331 (365)
                      ++++. +|+|+|+.+++++... ...+|+.+..++|....
T Consensus       206 ~~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~~~  245 (254)
T 1hdc_A          206 MGRVGNEPGEIAGAVVKLLSDTSSYVTGAELAVDGGWTTG  245 (254)
T ss_dssp             TSSCB-CHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTTS
T ss_pred             CCCCCCCHHHHHHHHHHHhCchhcCCCCCEEEECCCcccc
Confidence            66788 9999999999655332 25689999999997653

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=8e-41  Score=301.99  Aligned_cols=237  Identities=23%  Similarity=0.269  Sum_probs=197.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      ++++|+++||||++|||+++|++|+++|++|++++|++++++++.+++     ..++.++++|++|.++++++++++.+ 
T Consensus         3 ~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~-   76 (263)
T 2a4k_A            3 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL-----EAEAIAVVADVSDPKAVEAVFAEALE-   76 (263)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC-----CSSEEEEECCTTSHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----cCceEEEEcCCCCHHHHHHHHHHHHH-
Confidence            478999999999999999999999999999999999998877766554     24788999999999999999999988 


Q ss_pred             HhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                           .++++|+||||||+..  +..+.+.+++++++++|+.|+++++++++|+| ++  .|+||++||.++.       
T Consensus        77 -----~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~--~g~iv~isS~~~~-------  141 (263)
T 2a4k_A           77 -----EFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVL-EE--GGSLVLTGSVAGL-------  141 (263)
T ss_dssp             -----HHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHC-CT--TCEEEEECCCTTC-------
T ss_pred             -----HcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH-hc--CCEEEEEecchhc-------
Confidence                 4578999999999863  34577899999999999999999999999999 43  5899999998865       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  293 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  293 (365)
                                    +.++...|++||++++.|+++++.|++   +.||+||+|+||+|+|++.+..+... ........|
T Consensus       142 --------------~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~v~~v~PG~v~t~~~~~~~~~~-~~~~~~~~p  203 (263)
T 2a4k_A          142 --------------GAFGLAHYAAGKLGVVGLARTLALELA---RKGVRVNVLLPGLIQTPMTAGLPPWA-WEQEVGASP  203 (263)
T ss_dssp             --------------CHHHHHHHHHCSSHHHHHHHHHHHHHT---TTTCEEEEEEECSBCCGGGTTSCHHH-HHHHHHTST
T ss_pred             --------------CCCCcHHHHHHHHHHHHHHHHHHHHhh---hhCcEEEEEEeCcCcCchhhhcCHHH-HHHHHhcCC
Confidence                          345678999999999999999999998   78999999999999999987653221 111222246


Q ss_pred             hcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcccc
Q 017812          294 LGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVN  331 (365)
Q Consensus       294 ~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~~  331 (365)
                      ++++.+|+|+|+.+++++... ...+|+.+..++|....
T Consensus       204 ~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdgG~~~~  242 (263)
T 2a4k_A          204 LGRAGRPEEVAQAALFLLSEESAYITGQALYVDGGRSIV  242 (263)
T ss_dssp             TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTTC
T ss_pred             CCCCcCHHHHHHHHHHHhCccccCCcCCEEEECCCcccc
Confidence            678899999999999655432 25689999999997653

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=100.00  E-value=7.5e-41  Score=308.04  Aligned_cols=231  Identities=19%  Similarity=0.276  Sum_probs=194.9

Q ss_pred             CCCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHH
Q 017812           53 PITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  132 (365)
Q Consensus        53 ~~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~  132 (365)
                      .+.+++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++...  +.++.++++|++|.++++++++++
T Consensus        25 ~m~~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~  102 (301)
T 3tjr_A           25 FLSGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQ--GFDAHGVVCDVRHLDEMVRLADEA  102 (301)
T ss_dssp             CCCCSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             HHhccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHH
Confidence            345689999999999999999999999999999999999999999999998776  567899999999999999999999


Q ss_pred             HHHHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc
Q 017812          133 QQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN  210 (365)
Q Consensus       133 ~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~  210 (365)
                      .+      .++++|+||||||+..  +..+.+.+++++++++|+.|+++++++++|.|.+++..|+||++||.++.    
T Consensus       103 ~~------~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~----  172 (301)
T 3tjr_A          103 FR------LLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGL----  172 (301)
T ss_dssp             HH------HHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGT----
T ss_pred             HH------hCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhc----
Confidence            88      4578999999999873  44578999999999999999999999999999876545899999999998    


Q ss_pred             ccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHH----
Q 017812          211 AQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLM----  286 (365)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~----  286 (365)
                                      .+.++...|++||+|+++|+++++.|++   +.||+|++|+||+|+|++...........    
T Consensus       173 ----------------~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~  233 (301)
T 3tjr_A          173 ----------------VPNAGLGTYGVAKYGVVGLAETLAREVK---PNGIGVSVLCPMVVETKLVSNSERIRGADYGMS  233 (301)
T ss_dssp             ----------------SCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEECCSCCCSSHHHHHHHHC-------
T ss_pred             ----------------CCCCCchHHHHHHHHHHHHHHHHHHHhc---ccCcEEEEEECCccccccccccccccchhhccc
Confidence                            7888999999999999999999999998   78999999999999999976432211100    


Q ss_pred             -----HHHHHHHhcCCCCHHHHHHHHHHHhcCC
Q 017812          287 -----AFTVLKLLGLLQSPEKGINSVLDAALAP  314 (365)
Q Consensus       287 -----~~~~~~~~~~~~~p~e~A~~i~~~~l~~  314 (365)
                           .+........+.+|+|+|+.+++++..+
T Consensus       234 ~~~~~~~~~~~~~~~~~~pedvA~~i~~~l~~~  266 (301)
T 3tjr_A          234 ATPEGAFGPLPTQDESVSADDVARLTADAILAN  266 (301)
T ss_dssp             ---------------CCCHHHHHHHHHHHHHHT
T ss_pred             cChhhhccccccccCCCCHHHHHHHHHHHHhcC
Confidence                 0011112234679999999999877553

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=100.00  E-value=5.2e-41  Score=302.72  Aligned_cols=232  Identities=21%  Similarity=0.248  Sum_probs=197.9

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+..+           ..++.++++|++|+++++++++++.+
T Consensus        24 ~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-----------~~~~~~~~~Dv~d~~~v~~~~~~~~~   92 (260)
T 3un1_A           24 MRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA-----------DPDIHTVAGDISKPETADRIVREGIE   92 (260)
T ss_dssp             HHTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS-----------STTEEEEESCTTSHHHHHHHHHHHHH
T ss_pred             hCcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc-----------cCceEEEEccCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999876421           34789999999999999999999988


Q ss_pred             HHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017812          135 WLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~  212 (365)
                            .++++|+||||||+..  +..+.+.+++++++++|+.|+++++++++|.|++++ .|+||++||..+...    
T Consensus        93 ------~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~----  161 (260)
T 3un1_A           93 ------RFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQG-SGHIVSITTSLVDQP----  161 (260)
T ss_dssp             ------HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCTTTTSC----
T ss_pred             ------HCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEEechhhccC----
Confidence                  4578999999999864  345789999999999999999999999999998876 799999999876511    


Q ss_pred             CCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHH
Q 017812          213 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLK  292 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~  292 (365)
                                    .+.++...|++||+|+++|+++++.|++   +.||+||+|+||+|+|++......    .......
T Consensus       162 --------------~~~~~~~~Y~~sKaa~~~l~~~la~e~~---~~gI~vn~v~PG~v~t~~~~~~~~----~~~~~~~  220 (260)
T 3un1_A          162 --------------MVGMPSALASLTKGGLNAVTRSLAMEFS---RSGVRVNAVSPGVIKTPMHPAETH----STLAGLH  220 (260)
T ss_dssp             --------------BTTCCCHHHHHHHHHHHHHHHHHHHHTT---TTTEEEEEEEECCBCCTTSCGGGH----HHHHTTS
T ss_pred             --------------CCCCccHHHHHHHHHHHHHHHHHHHHhC---cCCeEEEEEeecCCCCCCCCHHHH----HHHhccC
Confidence                          3345568999999999999999999998   889999999999999999764221    1122335


Q ss_pred             HhcCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017812          293 LLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  330 (365)
Q Consensus       293 ~~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~  330 (365)
                      |++++.+|+|+|++++++ ..+...+|+.+.+|+|...
T Consensus       221 p~~r~~~~~dva~av~~L-~~~~~itG~~i~vdGG~~~  257 (260)
T 3un1_A          221 PVGRMGEIRDVVDAVLYL-EHAGFITGEILHVDGGQNA  257 (260)
T ss_dssp             TTSSCBCHHHHHHHHHHH-HHCTTCCSCEEEESTTGGG
T ss_pred             CCCCCcCHHHHHHHHHHh-cccCCCCCcEEEECCCeec
Confidence            778999999999999976 4456779999999999765

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=100.00  E-value=5.5e-41  Score=310.98  Aligned_cols=255  Identities=23%  Similarity=0.255  Sum_probs=212.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEE---------ecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLV---------GRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVL  126 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~---------~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~  126 (365)
                      +++||++|||||++|||+++|++|+++|++|+++         +|+.++++++.+++...+  ..   ..+|++|.++++
T Consensus         6 ~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~--~~---~~~D~~~~~~~~   80 (319)
T 1gz6_A            6 RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRG--GK---AVANYDSVEAGE   80 (319)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTT--CE---EEEECCCGGGHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhC--Ce---EEEeCCCHHHHH
Confidence            4789999999999999999999999999999996         457788888888887653  22   358999999999


Q ss_pred             HHHHHHHHHHhccCCCCCeeEEEecCCcccC--CCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017812          127 KFKDSLQQWLLDSDMHSSIQLLINNAGILAT--SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  204 (365)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~id~lv~nAG~~~~--~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~  204 (365)
                      ++++++.+      .++++|+||||||+...  ..+.+.++++.++++|+.|+++++++++|+|++++ .|+||++||.+
T Consensus        81 ~~~~~~~~------~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~grIV~vsS~~  153 (319)
T 1gz6_A           81 KLVKTALD------TFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQN-YGRIIMTASAS  153 (319)
T ss_dssp             HHHHHHHH------HTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCHH
T ss_pred             HHHHHHHH------HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECChh
Confidence            99999887      56899999999998743  45679999999999999999999999999998765 68999999998


Q ss_pred             ccccccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHH
Q 017812          205 HRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLS  284 (365)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~  284 (365)
                      +.                    .+.++...|++||+|+++|+++|++|++   +.||+||+|+||++ |++.+...... 
T Consensus       154 ~~--------------------~~~~~~~~Y~aSK~a~~~~~~~la~el~---~~gI~vn~v~PG~~-t~~~~~~~~~~-  208 (319)
T 1gz6_A          154 GI--------------------YGNFGQANYSAAKLGLLGLANTLVIEGR---KNNIHCNTIAPNAG-SRMTETVMPED-  208 (319)
T ss_dssp             HH--------------------HCCTTCHHHHHHHHHHHHHHHHHHHHTG---GGTEEEEEEEEECC-STTTGGGSCHH-
T ss_pred             hc--------------------cCCCCCHHHHHHHHHHHHHHHHHHHHhc---ccCEEEEEEeCCCc-cccccccCChh-
Confidence            87                    5667789999999999999999999998   78999999999998 88865421110 


Q ss_pred             HHHHHHHHHhcCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc------------cCCcccCCHHHHHHHHHHHHHh
Q 017812          285 LMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV------------NSSALSFNSKLAGELWTTSCNL  352 (365)
Q Consensus       285 ~~~~~~~~~~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~------------~~~~~~~d~~~~~~lw~~~~~~  352 (365)
                         .   .   ...+|+|+|..+++++..+...+|++|..++|...            ..+....|++.++++|+.++++
T Consensus       209 ---~---~---~~~~p~dvA~~~~~l~s~~~~~tG~~~~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lw~~~~~~  279 (319)
T 1gz6_A          209 ---L---V---EALKPEYVAPLVLWLCHESCEENGGLFEVGAGWIGKLRWERTLGAIVRKRNQPMTPEAVRDNWVKICDF  279 (319)
T ss_dssp             ---H---H---HHSCGGGTHHHHHHHTSTTCCCCSCEEEEETTEEEEEEEEECCCEECCBTTBCCCHHHHHHTHHHHTCC
T ss_pred             ---h---h---ccCCHHHHHHHHHHHhCchhhcCCCEEEECCCeEEEEeeeeccceeccCCCCCCCHHHHHHHHHHhhcc
Confidence               0   0   12499999999997665544568999987777432            1234567999999999999999


Q ss_pred             hhcc
Q 017812          353 FINS  356 (365)
Q Consensus       353 ~~~~  356 (365)
                      .+..
T Consensus       280 ~~~~  283 (319)
T 1gz6_A          280 SNAS  283 (319)
T ss_dssp             TTCB
T ss_pred             cccc
Confidence            8654

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=100.00  E-value=1.3e-40  Score=300.71  Aligned_cols=242  Identities=24%  Similarity=0.259  Sum_probs=201.0

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHH
Q 017812           54 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  133 (365)
Q Consensus        54 ~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~  133 (365)
                      +.++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++.     .++.++++|++|+++++++++++.
T Consensus         7 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~D~~d~~~v~~~~~~~~   81 (263)
T 3ak4_A            7 IFDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLE-----NGGFAVEVDVTKRASVDAAMQKAI   81 (263)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCT-----TCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh-----cCCeEEEEeCCCHHHHHHHHHHHH
Confidence            345789999999999999999999999999999999999888776655542     267889999999999999999998


Q ss_pred             HHHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017812          134 QWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  211 (365)
Q Consensus       134 ~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~  211 (365)
                      +      .++++|+||||||+..  +..+.+.+++++.+++|+.|+++++++++|+|.+++..|+||++||..+.     
T Consensus        82 ~------~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-----  150 (263)
T 3ak4_A           82 D------ALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAK-----  150 (263)
T ss_dssp             H------HHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGT-----
T ss_pred             H------HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccc-----
Confidence            8      4578999999999863  34577899999999999999999999999999876435899999999987     


Q ss_pred             cCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh----------
Q 017812          212 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS----------  281 (365)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~----------  281 (365)
                                     .+.++...|++||++++.|+++++.|++   +.||+|++|+||+|.|++......          
T Consensus       151 ---------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~  212 (263)
T 3ak4_A          151 ---------------VGAPLLAHYSASKFAVFGWTQALAREMA---PKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTP  212 (263)
T ss_dssp             ---------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCH
T ss_pred             ---------------cCCCCchhHHHHHHHHHHHHHHHHHHHh---HcCeEEEEEecccccChhhhhhccccccccccCc
Confidence                           6777889999999999999999999998   789999999999999998654211          


Q ss_pred             HHHHHHHHHHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017812          282 FLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  329 (365)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~  329 (365)
                      ...........|++++.+|+|+|+.+++++... ...+|+.+..++|..
T Consensus       213 ~~~~~~~~~~~p~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~  261 (263)
T 3ak4_A          213 EAVRAEYVSLTPLGRIEEPEDVADVVVFLASDAARFMTGQGINVTGGVR  261 (263)
T ss_dssp             HHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSS
T ss_pred             HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECcCEe
Confidence            000111112236678899999999999655332 256899999998864

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=100.00  E-value=2.1e-40  Score=299.49  Aligned_cols=241  Identities=20%  Similarity=0.276  Sum_probs=201.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.++             +.++.++++|++|.++++++++++.+ 
T Consensus         5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-------------~~~~~~~~~Dl~~~~~v~~~~~~~~~-   70 (264)
T 2dtx_A            5 DLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG-------------EAKYDHIECDVTNPDQVKASIDHIFK-   70 (264)
T ss_dssp             GGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC-------------SCSSEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc-------------CCceEEEEecCCCHHHHHHHHHHHHH-
Confidence            4789999999999999999999999999999999998764             34678999999999999999999988 


Q ss_pred             HhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                           .++++|+||||||+..  +..+.+.+++++++++|+.|+++++++++|.|++++ .|+||++||.++.       
T Consensus        71 -----~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~-------  137 (264)
T 2dtx_A           71 -----EYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSR-DPSIVNISSVQAS-------  137 (264)
T ss_dssp             -----HHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-SCEEEEECCGGGT-------
T ss_pred             -----HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEECCchhc-------
Confidence                 4578999999999863  445778999999999999999999999999998765 6899999999988       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccch------hH----H
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP------SF----L  283 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~------~~----~  283 (365)
                                   .+.++...|++||++++.|+++++.|++   +. |+||+|+||+++|++.....      ..    .
T Consensus       138 -------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~-i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~  200 (264)
T 2dtx_A          138 -------------IITKNASAYVTSKHAVIGLTKSIALDYA---PL-LRCNAVCPATIDTPLVRKAAELEVGSDPMRIEK  200 (264)
T ss_dssp             -------------SCCTTBHHHHHHHHHHHHHHHHHHHHHT---TT-SEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHH
T ss_pred             -------------cCCCCchhHHHHHHHHHHHHHHHHHHhc---CC-cEEEEEEeCCCcCcchhhhhhcccccCchhhHH
Confidence                         6778889999999999999999999997   66 99999999999999865431      00    1


Q ss_pred             HHHHHHHHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccccCCcccCCHH
Q 017812          284 SLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVNSSALSFNSK  340 (365)
Q Consensus       284 ~~~~~~~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~~~~~~~~d~~  340 (365)
                      .........|++++.+|+|+|+.+++++... ...+|+.+..++|.....+....+++
T Consensus       201 ~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~~~~p~~~~~~~  258 (264)
T 2dtx_A          201 KISEWGHEHPMQRIGKPQEVASAVAFLASREASFITGTCLYVDGGLSIRAPISTPELE  258 (264)
T ss_dssp             HHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCCCCCCCC--
T ss_pred             HHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCCCcEEEECCCcccCCCCCCcchh
Confidence            1111122246678899999999999655432 25689999999998876666655544

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=100.00  E-value=9e-41  Score=303.24  Aligned_cols=241  Identities=20%  Similarity=0.252  Sum_probs=193.6

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEE-ecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLV-GRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      .++|++|||||++|||+++|++|+++|++|+++ .|+.+.++++.+++.+.  +.++.++.+|++|.++++++++++.+ 
T Consensus        24 ~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~-  100 (272)
T 4e3z_A           24 SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITES--GGEAVAIPGDVGNAADIAAMFSAVDR-  100 (272)
T ss_dssp             CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHH-
Confidence            358999999999999999999999999999887 78888888888888765  56899999999999999999999988 


Q ss_pred             HhccCCCCCeeEEEecCCccc---CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcC--CCCCeEEEEcCCccccccc
Q 017812          136 LLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNS--PVPSRIVNVTSFTHRNVFN  210 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~--~~~g~iV~vsS~~~~~~~~  210 (365)
                           .++++|+||||||+..   +..+.+.+++++++++|+.|++++++.++|.|.+.  +..|+||++||.++.    
T Consensus       101 -----~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~----  171 (272)
T 4e3z_A          101 -----QFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAI----  171 (272)
T ss_dssp             -----HHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHH----
T ss_pred             -----hCCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhc----
Confidence                 4578999999999863   34577999999999999999999999999999763  225899999999987    


Q ss_pred             ccCCCccccccccccCCCCC-hhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHH
Q 017812          211 AQVNNETITGKFFLRSKCYP-CARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFT  289 (365)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~-~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~  289 (365)
                                      .+.+ ....|++||+|++.|++++++|++   +.||+|++|+||+|+|++..............
T Consensus       172 ----------------~~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~  232 (272)
T 4e3z_A          172 ----------------LGSATQYVDYAASKAAIDTFTIGLAREVA---AEGIRVNAVRPGIIETDLHASGGLPDRAREMA  232 (272)
T ss_dssp             ----------------HCCTTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBC-----------------
T ss_pred             ----------------cCCCCCcchhHHHHHHHHHHHHHHHHHHH---HcCcEEEEEecCCCcCCcccccCChHHHHHHh
Confidence                            4444 567899999999999999999998   78999999999999999876522211111222


Q ss_pred             HHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCc
Q 017812          290 VLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  328 (365)
Q Consensus       290 ~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~  328 (365)
                      ...+++++.+|+|+|+++++++... ...+|+.+.+++|+
T Consensus       233 ~~~~~~~~~~~edvA~~i~~l~s~~~~~~tG~~i~vdgG~  272 (272)
T 4e3z_A          233 PSVPMQRAGMPEEVADAILYLLSPSASYVTGSILNVSGGR  272 (272)
T ss_dssp             -CCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             hcCCcCCCcCHHHHHHHHHHHhCCccccccCCEEeecCCC
Confidence            2346678889999999999655432 35689999988874

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=100.00  E-value=2.1e-40  Score=299.43  Aligned_cols=248  Identities=17%  Similarity=0.179  Sum_probs=197.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      +.+|+++||||++|||+++|++|+++|++|++++|+.+...+...+..... +.++.++++|++|+++++++++++.+  
T Consensus         5 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~--   81 (264)
T 3i4f_A            5 RFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDV-EERLQFVQADVTKKEDLHKIVEEAMS--   81 (264)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGG-GGGEEEEECCTTSHHHHHHHHHHHHH--
T ss_pred             cccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhc-CCceEEEEecCCCHHHHHHHHHHHHH--
Confidence            457999999999999999999999999999999887655444433333322 45899999999999999999999988  


Q ss_pred             hccCCCCCeeEEEecCCcc----cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017812          137 LDSDMHSSIQLLINNAGIL----ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~----~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~  212 (365)
                          .++++|+||||||+.    .+..+.+.+++++++++|+.|++.++++++|.|++++ .|+||++||.....     
T Consensus        82 ----~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~-----  151 (264)
T 3i4f_A           82 ----HFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQN-FGRIINYGFQGADS-----  151 (264)
T ss_dssp             ----HHSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTTGGG-----
T ss_pred             ----HhCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-CCeEEEEeechhcc-----
Confidence                457899999999943    3445778999999999999999999999999998876 68999999984320     


Q ss_pred             CCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHH
Q 017812          213 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLK  292 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~  292 (365)
                                   ..+.++...|++||+|+++|+++++.|++   +.||+|++|+||+|.|++.+....... .......
T Consensus       152 -------------~~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gi~v~~v~PG~v~t~~~~~~~~~~~-~~~~~~~  214 (264)
T 3i4f_A          152 -------------APGWIYRSAFAAAKVGLVSLTKTVAYEEA---EYGITANMVCPGDIIGEMKEATIQEAR-QLKEHNT  214 (264)
T ss_dssp             -------------CCCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECCCCGGGGSCCHHHHH-HC-----
T ss_pred             -------------cCCCCCCchhHHHHHHHHHHHHHHHHHhh---hcCcEEEEEccCCccCccchhccHHHH-HHHhhcC
Confidence                         05667789999999999999999999998   789999999999999999887654322 1223345


Q ss_pred             HhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccccCCc
Q 017812          293 LLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVNSSA  334 (365)
Q Consensus       293 ~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~~~~~  334 (365)
                      |++++.+|+|+|+.+++++... ...+|+.+..++|......+
T Consensus       215 p~~r~~~~~dva~~v~~l~s~~~~~itG~~i~vdGG~~~~~~~  257 (264)
T 3i4f_A          215 PIGRSGTGEDIARTISFLCEDDSDMITGTIIEVTGAVDVIHRE  257 (264)
T ss_dssp             ---CCCCHHHHHHHHHHHHSGGGTTCCSCEEEESCSCCCCC--
T ss_pred             CCCCCcCHHHHHHHHHHHcCcccCCCCCcEEEEcCceeeccCC
Confidence            7789999999999999655432 35689999999998775443

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=100.00  E-value=5.4e-40  Score=296.95  Aligned_cols=241  Identities=15%  Similarity=0.152  Sum_probs=200.1

Q ss_pred             CCCCCEEEEecCC--ChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHH
Q 017812           56 GIKRPVCIVTGAT--SGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  133 (365)
Q Consensus        56 ~~~~k~vlITGas--sGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~  133 (365)
                      ++++|++|||||+  +|||+++|++|+++|++|++++|+. +.++..+++.+..+  ...++++|++|+++++++++++.
T Consensus         6 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~~--~~~~~~~D~~~~~~v~~~~~~~~   82 (265)
T 1qsg_A            6 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLG--SDIVLQCDVAEDASIDTMFAELG   82 (265)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHTT--CCCEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhcC--CcEEEEccCCCHHHHHHHHHHHH
Confidence            4789999999999  9999999999999999999999997 45555666655432  24789999999999999999988


Q ss_pred             HHHhccCCCCCeeEEEecCCcccC------CCC-CCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccc
Q 017812          134 QWLLDSDMHSSIQLLINNAGILAT------SSR-LTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHR  206 (365)
Q Consensus       134 ~~~~~~~~~~~id~lv~nAG~~~~------~~~-~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~  206 (365)
                      +      .++++|+||||||+..+      ..+ .+.+++++++++|+.|+++++++++|+|.+   .|+||++||.++.
T Consensus        83 ~------~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~isS~~~~  153 (265)
T 1qsg_A           83 K------VWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP---GSALLTLSYLGAE  153 (265)
T ss_dssp             T------TCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEECGGGT
T ss_pred             H------HcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc---CCEEEEEcchhhc
Confidence            7      67899999999998642      235 788999999999999999999999999974   4899999999887


Q ss_pred             ccccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHH
Q 017812          207 NVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLM  286 (365)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~  286 (365)
                                          .+.++...|++||+|++.|+++++.|++   +.||+||+|+||+|+|++.+..+......
T Consensus       154 --------------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~PG~v~t~~~~~~~~~~~~~  210 (265)
T 1qsg_A          154 --------------------RAIPNYNVMGLAKASLEANVRYMANAMG---PEGVRVNAISAGPIRTLAASGIKDFRKML  210 (265)
T ss_dssp             --------------------SBCTTTTHHHHHHHHHHHHHHHHHHHHT---TTTEEEEEEEECCCCCTTGGGSTTHHHHH
T ss_pred             --------------------cCCCCchHHHHHHHHHHHHHHHHHHHhh---hcCeEEEEEEeCCCccchhhcccccHHHH
Confidence                                6777888999999999999999999998   78999999999999999976543221111


Q ss_pred             -HHHHHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcccc
Q 017812          287 -AFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVN  331 (365)
Q Consensus       287 -~~~~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~~  331 (365)
                       ......|++++.+|+|+|+.+++++... ...+|+.+..++|....
T Consensus       211 ~~~~~~~p~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~~  257 (265)
T 1qsg_A          211 AHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFSIA  257 (265)
T ss_dssp             HHHHHHSTTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGB
T ss_pred             HHHHhcCCCCCCCCHHHHHHHHHHHhCchhcCccCCEEEECCCcCCC
Confidence             1222346778899999999999544321 24589999999997654

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=100.00  E-value=1.5e-40  Score=311.11  Aligned_cols=233  Identities=17%  Similarity=0.269  Sum_probs=199.3

Q ss_pred             CCCCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchh-------HHHHHHHHHhhcCCCceEEEEecCCChhh
Q 017812           52 PPITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHL-------LSETMADITSRNKDARLEAFQVDLSSFQS  124 (365)
Q Consensus        52 ~~~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~-------~~~~~~~l~~~~~~~~~~~~~~Dls~~~~  124 (365)
                      +...+++||++|||||++|||+++|++|+++|++|++++|+.++       ++++.+++...  +.++.++++|++|+++
T Consensus        38 ~~~~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~--g~~~~~~~~Dv~d~~~  115 (346)
T 3kvo_A           38 PNTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAV--GGKALPCIVDVRDEQQ  115 (346)
T ss_dssp             CCCSTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHT--TCEEEEEECCTTCHHH
T ss_pred             ccCCCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhc--CCeEEEEEccCCCHHH
Confidence            34557899999999999999999999999999999999999874       56677777665  5689999999999999


Q ss_pred             HHHHHHHHHHHHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcC
Q 017812          125 VLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS  202 (365)
Q Consensus       125 v~~~~~~~~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS  202 (365)
                      ++++++++.+      .+++||+||||||+..  +..+.+.++|++++++|+.|+++++++++|+|++++ .|+||++||
T Consensus       116 v~~~~~~~~~------~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~g~IV~iSS  188 (346)
T 3kvo_A          116 ISAAVEKAIK------KFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSK-VAHILNISP  188 (346)
T ss_dssp             HHHHHHHHHH------HHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCS-SCEEEEECC
T ss_pred             HHHHHHHHHH------HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CCEEEEECC
Confidence            9999999998      4578999999999863  456788999999999999999999999999999876 799999999


Q ss_pred             CcccccccccCCCccccccccccCCC--CChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCc-ccCCccccc
Q 017812          203 FTHRNVFNAQVNNETITGKFFLRSKC--YPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGV-VKTNIMREV  279 (365)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~-v~T~~~~~~  279 (365)
                      ..+.                    .+  .++...|++||+|+++|+++++.|++    +||+||+|+||+ ++|++.+..
T Consensus       189 ~~~~--------------------~~~~~~~~~~Y~aSKaal~~l~~~la~e~~----~gIrvn~v~PG~~i~T~~~~~~  244 (346)
T 3kvo_A          189 PLNL--------------------NPVWFKQHCAYTIAKYGMSMYVLGMAEEFK----GEIAVNALWPKTAIHTAAMDML  244 (346)
T ss_dssp             CCCC--------------------CGGGTSSSHHHHHHHHHHHHHHHHHHHHTT----TTCEEEEEECSBCBCCHHHHHH
T ss_pred             HHHc--------------------CCCCCCCchHHHHHHHHHHHHHHHHHHHhc----CCcEEEEEeCCCccccHHHHhh
Confidence            9987                    34  67789999999999999999999994    789999999995 899876532


Q ss_pred             hhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCC
Q 017812          280 PSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKG  327 (365)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g  327 (365)
                      ..         ..+++++.+|+|+|+++++++..+...+|+++ .|+|
T Consensus       245 ~~---------~~~~~r~~~pedvA~~v~~L~s~~~~itG~~i-vdgg  282 (346)
T 3kvo_A          245 GG---------PGIESQCRKVDIIADAAYSIFQKPKSFTGNFV-IDEN  282 (346)
T ss_dssp             CC-----------CGGGCBCTHHHHHHHHHHHTSCTTCCSCEE-EHHH
T ss_pred             cc---------ccccccCCCHHHHHHHHHHHHhcCCCCCceEE-ECCc
Confidence            21         12456788999999999977766446789988 4544

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=100.00  E-value=3.3e-40  Score=295.54  Aligned_cols=236  Identities=21%  Similarity=0.286  Sum_probs=188.1

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHH
Q 017812           54 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  133 (365)
Q Consensus        54 ~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~  133 (365)
                      ..++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++     ..++.++.+|+++.++++++++   
T Consensus         9 ~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~---   80 (249)
T 3f9i_A            9 MIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNAL-----KDNYTIEVCNLANKEECSNLIS---   80 (249)
T ss_dssp             CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CSSEEEEECCTTSHHHHHHHHH---
T ss_pred             cccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-----ccCccEEEcCCCCHHHHHHHHH---
Confidence            34678999999999999999999999999999999999999988887776     3478899999999999887765   


Q ss_pred             HHHhccCCCCCeeEEEecCCcccC--CCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017812          134 QWLLDSDMHSSIQLLINNAGILAT--SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  211 (365)
Q Consensus       134 ~~~~~~~~~~~id~lv~nAG~~~~--~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~  211 (365)
                             ..+++|+||||||+..+  ..+.+.+++++++++|+.|++.++++++|.|.+++ .|+||++||.++.     
T Consensus        81 -------~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~-----  147 (249)
T 3f9i_A           81 -------KTSNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKR-YGRIINISSIVGI-----  147 (249)
T ss_dssp             -------TCSCCSEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCCCC------
T ss_pred             -------hcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CcEEEEEccHHhc-----
Confidence                   34679999999998743  34678899999999999999999999999998765 6899999999988     


Q ss_pred             cCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHH
Q 017812          212 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVL  291 (365)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~  291 (365)
                                     .+.++...|++||+|+++|+++++.|++   +.||+|++|+||+|+|++.+...... .......
T Consensus       148 ---------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~PG~v~t~~~~~~~~~~-~~~~~~~  208 (249)
T 3f9i_A          148 ---------------AGNPGQANYCASKAGLIGMTKSLSYEVA---TRGITVNAVAPGFIKSDMTDKLNEKQ-REAIVQK  208 (249)
T ss_dssp             ----------------CCSCSHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECCBC------CCHHH-HHHHHHH
T ss_pred             ---------------cCCCCCchhHHHHHHHHHHHHHHHHHHH---HcCcEEEEEecCccccCcccccCHHH-HHHHHhc
Confidence                           7788899999999999999999999998   78999999999999999987764432 2223334


Q ss_pred             HHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017812          292 KLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  329 (365)
Q Consensus       292 ~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~  329 (365)
                      .+.+++.+|+|+|+++++++... ...+|+.+..++|..
T Consensus       209 ~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgG~~  247 (249)
T 3f9i_A          209 IPLGTYGIPEDVAYAVAFLASNNASYITGQTLHVNGGML  247 (249)
T ss_dssp             CTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSS
T ss_pred             CCCCCCcCHHHHHHHHHHHcCCccCCccCcEEEECCCEe
Confidence            56788999999999999655432 356899999998864

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=9.8e-41  Score=302.61  Aligned_cols=239  Identities=20%  Similarity=0.254  Sum_probs=201.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      ++++|+++||||++|||+++|++|+++|++|++++|++++++++.+++      ..+.++++|++|+++++++++++.+ 
T Consensus         6 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~Dv~d~~~v~~~~~~~~~-   78 (270)
T 1yde_A            6 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL------PGAVFILCDVTQEDDVKTLVSETIR-   78 (270)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC------TTEEEEECCTTSHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh------cCCeEEEcCCCCHHHHHHHHHHHHH-
Confidence            478999999999999999999999999999999999998877666554      1378899999999999999999988 


Q ss_pred             HhccCCCCCeeEEEecCCccc---CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017812          136 LLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~  212 (365)
                           .++++|+||||||+..   +..+.+.++|++++++|+.|+++++++++|+|+++  .|+||++||.++.      
T Consensus        79 -----~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~g~iv~isS~~~~------  145 (270)
T 1yde_A           79 -----RFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS--QGNVINISSLVGA------  145 (270)
T ss_dssp             -----HHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCHHHH------
T ss_pred             -----HcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC--CCEEEEEcCcccc------
Confidence                 4578999999999863   34577899999999999999999999999999765  4899999999877      


Q ss_pred             CCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccch----hHHH-HHH
Q 017812          213 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP----SFLS-LMA  287 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~----~~~~-~~~  287 (365)
                                    .+.++...|++||++++.|+++++.|++   ++||+||+|+||+|.|++.+...    .... ...
T Consensus       146 --------------~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~  208 (270)
T 1yde_A          146 --------------IGQAQAVPYVATKGAVTAMTKALALDES---PYGVRVNCISPGNIWTPLWEELAALMPDPRASIRE  208 (270)
T ss_dssp             --------------HCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHH
T ss_pred             --------------CCCCCCcccHHHHHHHHHHHHHHHHHhh---hhCcEEEEEEeCccccchhhhhhhcccchHHHHHH
Confidence                          6667788999999999999999999998   78999999999999999865321    1111 111


Q ss_pred             HHHHHHhcCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcccc
Q 017812          288 FTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  331 (365)
Q Consensus       288 ~~~~~~~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~~  331 (365)
                      .....|++|+.+|+|+|+.+++++..+...+|+.+.+|+|..+.
T Consensus       209 ~~~~~p~~r~~~p~dva~~v~~L~s~~~~itG~~i~vdGG~~~~  252 (270)
T 1yde_A          209 GMLAQPLGRMGQPAEVGAAAVFLASEANFCTGIELLVTGGAELG  252 (270)
T ss_dssp             HHHTSTTSSCBCHHHHHHHHHHHHHHCTTCCSCEEEESTTTTSC
T ss_pred             HhhcCCCCCCcCHHHHHHHHHHHcccCCCcCCCEEEECCCeecc
Confidence            11234778899999999999976655456789999999997664

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=100.00  E-value=2.8e-40  Score=300.57  Aligned_cols=240  Identities=18%  Similarity=0.181  Sum_probs=195.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEec-CchhHHHHHHHHHhhcCCCceEEEEecCCCh----hhHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGR-SSHLLSETMADITSRNKDARLEAFQVDLSSF----QSVLKFKD  130 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~----~~v~~~~~  130 (365)
                      ++++|++|||||++|||+++|++|+++|++|++++| +.++++++.+++.+.. +.++.++++|++|.    ++++++++
T Consensus         8 ~~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~   86 (276)
T 1mxh_A            8 ASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAAR-AGSAVLCKGDLSLSSSLLDCCEDIID   86 (276)
T ss_dssp             ---CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSSSTTHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhc-CCceEEEeccCCCccccHHHHHHHHH
Confidence            478999999999999999999999999999999999 9888888888887653 34789999999999    99999999


Q ss_pred             HHHHHHhccCCCCCeeEEEecCCccc--CCCCCCH-----------HHHhHhHHHHhHHHHHHHHHHhHhhhcCCCC---
Q 017812          131 SLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTP-----------EGYDQMMSTNYIGAFFLTKLLLPLLKNSPVP---  194 (365)
Q Consensus       131 ~~~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~-----------~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~---  194 (365)
                      ++.+      .++++|+||||||+..  +..+.+.           +++++++++|+.|+++++++++|.|. ++ .   
T Consensus        87 ~~~~------~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~-~~~~  158 (276)
T 1mxh_A           87 CSFR------AFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQG-EG-GAWR  158 (276)
T ss_dssp             HHHH------HHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC---------
T ss_pred             HHHH------hcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHh-cC-CCCC
Confidence            9888      4578999999999863  3445667           89999999999999999999999997 43 4   


Q ss_pred             ---CeEEEEcCCcccccccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcc
Q 017812          195 ---SRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVV  271 (365)
Q Consensus       195 ---g~iV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v  271 (365)
                         |+||++||.++.                    .+.++...|++||+|+++|+++++.|++   +.||+||+|+||+|
T Consensus       159 ~~~g~iv~isS~~~~--------------------~~~~~~~~Y~asK~a~~~l~~~la~e~~---~~gi~v~~v~PG~v  215 (276)
T 1mxh_A          159 SRNLSVVNLCDAMTD--------------------LPLPGFCVYTMAKHALGGLTRAAALELA---PRHIRVNAVAPGLS  215 (276)
T ss_dssp             CCCEEEEEECCGGGG--------------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEESSB
T ss_pred             CCCcEEEEECchhhc--------------------CCCCCCeehHHHHHHHHHHHHHHHHHHh---hcCeEEEEEecCcc
Confidence               899999999988                    7778889999999999999999999998   78999999999999


Q ss_pred             cCCccccchhHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017812          272 KTNIMREVPSFLSLMAFTVLKLLGL-LQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  330 (365)
Q Consensus       272 ~T~~~~~~~~~~~~~~~~~~~~~~~-~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~  330 (365)
                      .|+  ...+... ........|+++ +.+|+|+|+.+++++... ...+|+.+..++|...
T Consensus       216 ~t~--~~~~~~~-~~~~~~~~p~~r~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~  273 (276)
T 1mxh_A          216 LLP--PAMPQET-QEEYRRKVPLGQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLIL  273 (276)
T ss_dssp             SCC--SSSCHHH-HHHHHTTCTTTSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             cCC--ccCCHHH-HHHHHhcCCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCchhc
Confidence            999  3332211 111112245677 889999999999655422 2458999999988653

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=100.00  E-value=3.6e-41  Score=302.63  Aligned_cols=238  Identities=21%  Similarity=0.199  Sum_probs=200.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.++++++.+++     +.++.++++|++|+++++++++++.+ 
T Consensus         3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~-   76 (253)
T 1hxh_A            3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL-----GERSMFVRHDVSSEADWTLVMAAVQR-   76 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-----CTTEEEECCCTTCHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-----CCceEEEEccCCCHHHHHHHHHHHHH-
Confidence            478999999999999999999999999999999999998888877776     45788999999999999999999988 


Q ss_pred             HhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                           .++++|+||||||+..  +..+.+.+++++++++|+.|++++++.++|.|++++  |+||++||.++.       
T Consensus        77 -----~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~--g~iv~isS~~~~-------  142 (253)
T 1hxh_A           77 -----RLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG--GSIINMASVSSW-------  142 (253)
T ss_dssp             -----HHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC--EEEEEECCGGGT-------
T ss_pred             -----HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC--CEEEEEcchhhc-------
Confidence                 4578999999999863  445778999999999999999999999999998765  899999999988       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCC--CeEEEEecCCcccCCcccc-chhHHHHHHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSR--HVSVIAADPGVVKTNIMRE-VPSFLSLMAFTV  290 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~--gi~v~~v~PG~v~T~~~~~-~~~~~~~~~~~~  290 (365)
                                   .+.++...|++||++++.|+++++.|++   +.  ||+|++|+||++.|++... .+..........
T Consensus       143 -------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~  206 (253)
T 1hxh_A          143 -------------LPIEQYAGYSASKAAVSALTRAAALSCR---KQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLH  206 (253)
T ss_dssp             -------------SCCTTBHHHHHHHHHHHHHHHHHHHHHH---HHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBC
T ss_pred             -------------CCCCCCccHHHHHHHHHHHHHHHHHHhh---hcCCCeEEEEEEeCCccCchhhhccchhhhHHHHhh
Confidence                         7778889999999999999999999997   56  9999999999999998653 111100000111


Q ss_pred             ---HHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017812          291 ---LKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  329 (365)
Q Consensus       291 ---~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~  329 (365)
                         ..|++++.+|+|+|+.+++++... ...+|+.+..++|..
T Consensus       207 ~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~~  249 (253)
T 1hxh_A          207 DPKLNRAGRAYMPERIAQLVLFLASDESSVMSGSELHADNSIL  249 (253)
T ss_dssp             BTTTBTTCCEECHHHHHHHHHHHHSGGGTTCCSCEEEESSSCT
T ss_pred             hhccCccCCCCCHHHHHHHHHHHcCccccCCCCcEEEECCCcc
Confidence               235677889999999999655332 256899999998864

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=100.00  E-value=2e-40  Score=298.94  Aligned_cols=236  Identities=20%  Similarity=0.252  Sum_probs=201.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.++++++.+++.     .++.++++|++|+++++++++++.+ 
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~-   77 (260)
T 1nff_A            4 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA-----DAARYVHLDVTQPAQWKAAVDTAVT-   77 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG-----GGEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh-----cCceEEEecCCCHHHHHHHHHHHHH-
Confidence            3789999999999999999999999999999999999988877766653     2478899999999999999999988 


Q ss_pred             HhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                           .++++|+||||||+..  +..+.+.+++++++++|+.|+++++++++|.|++++ .|+||++||.++.       
T Consensus        78 -----~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~-------  144 (260)
T 1nff_A           78 -----AFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAG-RGSIINISSIEGL-------  144 (260)
T ss_dssp             -----HHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT-------
T ss_pred             -----HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEeehhhc-------
Confidence                 4578999999999863  345778999999999999999999999999998765 6899999999988       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  293 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  293 (365)
                                   .+.++...|++||++++.|+++++.|++   +.||+|++|+||+|.|++.+ .....    .. ..|
T Consensus       145 -------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~Pg~v~t~~~~-~~~~~----~~-~~~  202 (260)
T 1nff_A          145 -------------AGTVACHGYTATKFAVRGLTKSTALELG---PSGIRVNSIHPGLVKTPMTD-WVPED----IF-QTA  202 (260)
T ss_dssp             -------------SCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECCBCSGGGT-TSCTT----CS-CCS
T ss_pred             -------------CCCCCchhHHHHHHHHHHHHHHHHHHhC---ccCcEEEEEEeCCCCCCccc-cchhh----HH-hCc
Confidence                         6777889999999999999999999998   78999999999999999865 21100    00 235


Q ss_pred             hcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccccC
Q 017812          294 LGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVNS  332 (365)
Q Consensus       294 ~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~~~  332 (365)
                      ++++.+|+|+|+.+++++... ...+|+.+..++|.....
T Consensus       203 ~~~~~~~~dvA~~v~~l~s~~~~~~~G~~~~v~gG~~~~~  242 (260)
T 1nff_A          203 LGRAAEPVEVSNLVVYLASDESSYSTGAEFVVDGGTVAGL  242 (260)
T ss_dssp             SSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGSC
T ss_pred             cCCCCCHHHHHHHHHHHhCccccCCcCCEEEECCCeeccC
Confidence            567889999999999655332 245799999999987653

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=100.00  E-value=5.2e-40  Score=296.43  Aligned_cols=240  Identities=18%  Similarity=0.188  Sum_probs=200.1

Q ss_pred             CCCCCEEEEecCC--ChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHH
Q 017812           56 GIKRPVCIVTGAT--SGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  133 (365)
Q Consensus        56 ~~~~k~vlITGas--sGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~  133 (365)
                      ++++|+++||||+  +|||+++|++|+++|++|++++|+.+ .++..+++.+..+  .+.++++|++|+++++++++++.
T Consensus         5 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~--~~~~~~~D~~~~~~v~~~~~~~~   81 (261)
T 2wyu_A            5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEALG--GALLFRADVTQDEELDALFAGVK   81 (261)
T ss_dssp             CCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHHHHHHHHHHTT--CCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHhcC--CcEEEECCCCCHHHHHHHHHHHH
Confidence            4679999999999  99999999999999999999999975 4455556655432  37899999999999999999998


Q ss_pred             HHHhccCCCCCeeEEEecCCccc------CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccc
Q 017812          134 QWLLDSDMHSSIQLLINNAGILA------TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRN  207 (365)
Q Consensus       134 ~~~~~~~~~~~id~lv~nAG~~~------~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~  207 (365)
                      +      .++++|+||||||+..      +..+.+.+++++++++|+.|+++++++++|.|++   .|+||++||.++. 
T Consensus        82 ~------~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~isS~~~~-  151 (261)
T 2wyu_A           82 E------AFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE---GGGIVTLTYYASE-  151 (261)
T ss_dssp             H------HHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE---EEEEEEEECGGGT-
T ss_pred             H------HcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhcc---CCEEEEEeccccc-
Confidence            8      4578999999999863      3457789999999999999999999999999974   4899999999887 


Q ss_pred             cccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHH-H
Q 017812          208 VFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSL-M  286 (365)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~-~  286 (365)
                                         .+.++...|++||+|++.|+++++.|++   +.||+||+|+||+|+|++.+........ .
T Consensus       152 -------------------~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~  209 (261)
T 2wyu_A          152 -------------------KVVPKYNVMAIAKAALEASVRYLAYELG---PKGVRVNAISAGPVRTVAARSIPGFTKMYD  209 (261)
T ss_dssp             -------------------SBCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEECCCCCTGGGGCTTHHHHHH
T ss_pred             -------------------CCCCCchHHHHHHHHHHHHHHHHHHHHh---hhCcEEEEEeeCCCcCchhhhccccHHHHH
Confidence                               6777888999999999999999999998   7899999999999999997654322111 1


Q ss_pred             HHHHHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017812          287 AFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  330 (365)
Q Consensus       287 ~~~~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~  330 (365)
                      ......|++++.+|+|+|+.+++++... ...+|+.+..++|...
T Consensus       210 ~~~~~~p~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~  254 (261)
T 2wyu_A          210 RVAQTAPLRRNITQEEVGNLGLFLLSPLASGITGEVVYVDAGYHI  254 (261)
T ss_dssp             HHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHhcCCCCCCCCHHHHHHHHHHHcChhhcCCCCCEEEECCCccc
Confidence            1223346778899999999999655332 3458999999998765

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=100.00  E-value=2e-40  Score=298.99  Aligned_cols=237  Identities=19%  Similarity=0.227  Sum_probs=189.5

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      +++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++...  +.++.++++|++|+++++++++++.+. 
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~-   79 (260)
T 2qq5_A            3 MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSL--GGQCVPVVCDSSQESEVRSLFEQVDRE-   79 (260)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH--SSEEEEEECCTTSHHHHHHHHHHHHHH-
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHc--CCceEEEECCCCCHHHHHHHHHHHHHh-
Confidence            67999999999999999999999999999999999999998888888765  457899999999999999999998762 


Q ss_pred             hccCCCCCeeEEEecCC--cc-------cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccc
Q 017812          137 LDSDMHSSIQLLINNAG--IL-------ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRN  207 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG--~~-------~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~  207 (365)
                          .++++|+||||||  +.       .+..+.+.++|++++++|+.+++++++.++|.|.+++ .|+||++||.++. 
T Consensus        80 ----~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~-  153 (260)
T 2qq5_A           80 ----QQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAG-QGLIVVISSPGSL-  153 (260)
T ss_dssp             ----HTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGT-CCEEEEECCGGGT-
T ss_pred             ----cCCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcC-CcEEEEEcChhhc-
Confidence                1588999999995  32       3445778899999999999999999999999998765 6999999999876 


Q ss_pred             cccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHH--
Q 017812          208 VFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSL--  285 (365)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~--  285 (365)
                                         .+ ++...|++||+|+++|+++++.|++   +.||+||+|+||+|+|++.+........  
T Consensus       154 -------------------~~-~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~  210 (260)
T 2qq5_A          154 -------------------QY-MFNVPYGVGKAACDKLAADCAHELR---RHGVSCVSLWPGIVQTELLKEHMAKEEVLQ  210 (260)
T ss_dssp             -------------------SC-CSSHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEECCCSCTTTC-----------
T ss_pred             -------------------CC-CCCCchHHHHHHHHHHHHHHHHHhc---cCCeEEEEEecCccccHHHHHhhccccccc
Confidence                               32 2357899999999999999999998   7899999999999999997653211100  


Q ss_pred             HH-HH-HHHHhcCCCCHHHHHHHHHHHhcCCC--CCcccEEeCC
Q 017812          286 MA-FT-VLKLLGLLQSPEKGINSVLDAALAPP--ETSGVYFFGG  325 (365)
Q Consensus       286 ~~-~~-~~~~~~~~~~p~e~A~~i~~~~l~~~--~~~G~~~~~~  325 (365)
                      .. .. ...++++..+|+|+|+.+++++....  ..+|+++..+
T Consensus       211 ~~~~~~~~~~~~~~~~pe~va~~v~~l~s~~~~~~itG~~i~~~  254 (260)
T 2qq5_A          211 DPVLKQFKSAFSSAETTELSGKCVVALATDPNILSLSGKVLPSC  254 (260)
T ss_dssp             -----------CHHHHHHHHHHHHHHHHTCTTGGGGTTCEEEHH
T ss_pred             hhHHHHHHhhhccCCCHHHHHHHHHHHhcCcccccccceeechh
Confidence            00 00 11244455699999999996554332  2478888744

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=100.00  E-value=5.7e-40  Score=293.59  Aligned_cols=230  Identities=27%  Similarity=0.280  Sum_probs=195.2

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecC--CChhhHHHHHHH
Q 017812           54 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDL--SSFQSVLKFKDS  131 (365)
Q Consensus        54 ~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl--s~~~~v~~~~~~  131 (365)
                      ..+++||+++||||++|||+++|++|+++|++|++++|+.++++++.+++.+.+ ..++.++.+|+  +|.+++++++++
T Consensus         9 ~~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~d~d~~~~~~~~~~~~~   87 (247)
T 3i1j_A            9 PELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAG-QPQPLIIALNLENATAQQYRELAAR   87 (247)
T ss_dssp             TTTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-SCCCEEEECCTTTCCHHHHHHHHHH
T ss_pred             CccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcC-CCCceEEEeccccCCHHHHHHHHHH
Confidence            345889999999999999999999999999999999999999999999987764 34566777776  999999999999


Q ss_pred             HHHHHhccCCCCCeeEEEecCCccc---CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccc
Q 017812          132 LQQWLLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNV  208 (365)
Q Consensus       132 ~~~~~~~~~~~~~id~lv~nAG~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~  208 (365)
                      +.+      .++++|+||||||+..   +..+.+.+++++++++|+.|++.++++++|+|++++ .|+||++||..+.  
T Consensus        88 ~~~------~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~--  158 (247)
T 3i1j_A           88 VEH------EFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSE-DASIAFTSSSVGR--  158 (247)
T ss_dssp             HHH------HHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-SEEEEEECCGGGT--
T ss_pred             HHH------hCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCeEEEEcchhhc--
Confidence            988      4578999999999863   345779999999999999999999999999998876 7899999999988  


Q ss_pred             ccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCC-CCeEEEEecCCcccCCccccchhHHHHHH
Q 017812          209 FNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKS-RHVSVIAADPGVVKTNIMREVPSFLSLMA  287 (365)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~-~gi~v~~v~PG~v~T~~~~~~~~~~~~~~  287 (365)
                                        .+.++...|++||+|+++|+++++.|+.   + +||+|++|+||+|+|++.+......    
T Consensus       159 ------------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~~~i~v~~v~PG~v~t~~~~~~~~~~----  213 (247)
T 3i1j_A          159 ------------------KGRANWGAYGVSKFATEGLMQTLADELE---GVTAVRANSINPGATRTGMRAQAYPDE----  213 (247)
T ss_dssp             ------------------SCCTTCHHHHHHHHHHHHHHHHHHHHHT---TTSSEEEEEEECCCCSSHHHHHHSTTS----
T ss_pred             ------------------CCCCCcchhHHHHHHHHHHHHHHHHHhc---CCCCeEEEEEecCcccCccchhccccc----
Confidence                              7888899999999999999999999997   5 7999999999999999865321110    


Q ss_pred             HHHHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEe
Q 017812          288 FTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFF  323 (365)
Q Consensus       288 ~~~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~  323 (365)
                           ...+..+|+|+|+.+++++... ...+|+.+.
T Consensus       214 -----~~~~~~~p~dva~~~~~l~s~~~~~itG~~i~  245 (247)
T 3i1j_A          214 -----NPLNNPAPEDIMPVYLYLMGPDSTGINGQALN  245 (247)
T ss_dssp             -----CGGGSCCGGGGTHHHHHHHSGGGTTCCSCEEE
T ss_pred             -----CccCCCCHHHHHHHHHHHhCchhccccCeeec
Confidence                 1124569999999999544321 245787765

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=100.00  E-value=5.7e-40  Score=299.66  Aligned_cols=241  Identities=19%  Similarity=0.277  Sum_probs=198.4

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchh-HHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHH
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHL-LSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  133 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~  133 (365)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.++ .+++.+++.+.  +.++.++.+|++|.++++++++++.
T Consensus        25 ~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~  102 (283)
T 1g0o_A           25 ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKN--GSDAACVKANVGVVEDIVRMFEEAV  102 (283)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHh--CCCeEEEEcCCCCHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999764 56666666554  4578999999999999999999998


Q ss_pred             HHHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017812          134 QWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  211 (365)
Q Consensus       134 ~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~  211 (365)
                      +      .++++|+||||||+..  +..+.+.+++++++++|+.|+++++++++|+|.  + .|+||++||.++.     
T Consensus       103 ~------~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~--~-~g~iv~isS~~~~-----  168 (283)
T 1g0o_A          103 K------IFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLE--I-GGRLILMGSITGQ-----  168 (283)
T ss_dssp             H------HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSC--T-TCEEEEECCGGGT-----
T ss_pred             H------HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHh--c-CCeEEEEechhhc-----
Confidence            8      4578999999999863  345678999999999999999999999999993  2 5899999999887     


Q ss_pred             cCCCccccccccccCCCCC-hhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh---------
Q 017812          212 QVNNETITGKFFLRSKCYP-CARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS---------  281 (365)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~-~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~---------  281 (365)
                                     .+.+ +...|++||+|+++|+++++.|++   +.||+||+|+||+|+|++.+....         
T Consensus       169 ---------------~~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~  230 (283)
T 1g0o_A          169 ---------------AKAVPKHAVYSGSKGAIETFARCMAIDMA---DKKITVNVVAPGGIKTDMYHAVCREYIPNGENL  230 (283)
T ss_dssp             ---------------CSSCSSCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTC
T ss_pred             ---------------cCCCCCCcchHHHHHHHHHHHHHHHHHhc---ccCeEEEEEecCcccchhhhhhhhhcccccccc
Confidence                           4444 478999999999999999999998   789999999999999998654210         


Q ss_pred             -HHHHHHHHH--HHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017812          282 -FLSLMAFTV--LKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  329 (365)
Q Consensus       282 -~~~~~~~~~--~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~  329 (365)
                       .........  ..|++|+.+|+|+|+.+++++... ...+|+.+..|+|..
T Consensus       231 ~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdgG~~  282 (283)
T 1g0o_A          231 SNEEVDEYAAVQWSPLRRVGLPIDIARVVCFLASNDGGWVTGKVIGIDGGAC  282 (283)
T ss_dssp             CHHHHHHHHHHHSCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred             CHHHHHHHHhhcCCCCCCCcCHHHHHHHHHHHhCccccCcCCCEEEeCCCcc
Confidence             111111111  346788999999999999655322 356899999998853

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=100.00  E-value=8.6e-40  Score=290.33  Aligned_cols=230  Identities=20%  Similarity=0.261  Sum_probs=196.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      ++|+++||||++|||+++|++|+++|++|++++|+.++++++.+++.+.. +.++.++++|++|+++++++++++.+   
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~---   76 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQ-GVEVFYHHLDVSKAESVEEFSKKVLE---   76 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTCHHHHHHHCC-HHH---
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc-CCeEEEEEeccCCHHHHHHHHHHHHH---
Confidence            37899999999999999999999999999999999999999998887544 56899999999999999999999988   


Q ss_pred             ccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCC
Q 017812          138 DSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNN  215 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~  215 (365)
                         .++++|+||||||+..  +..+.+.+++++++++|+.|+++++++++|+|.+.  .+++|++||..+.         
T Consensus        77 ---~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~~~ii~~sS~~~~---------  142 (235)
T 3l77_A           77 ---RFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRT--GGLALVTTSDVSA---------  142 (235)
T ss_dssp             ---HHSSCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCGGGS---------
T ss_pred             ---hcCCCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCcEEEEecchhc---------
Confidence               4578999999999863  44577999999999999999999999999999654  4899999999887         


Q ss_pred             ccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhc
Q 017812          216 ETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLG  295 (365)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  295 (365)
                                 .+.++...|++||+|+++|+++++.+     .+||+|++|+||+|+|++.+.......         ..
T Consensus       143 -----------~~~~~~~~Y~~sKaa~~~~~~~l~~~-----~~~i~v~~v~PG~v~T~~~~~~~~~~~---------~~  197 (235)
T 3l77_A          143 -----------RLIPYGGGYVSTKWAARALVRTFQIE-----NPDVRFFELRPGAVDTYFGGSKPGKPK---------EK  197 (235)
T ss_dssp             -----------SCCTTCHHHHHHHHHHHHHHHHHHHH-----CTTSEEEEEEECSBSSSTTTCCSCCCG---------GG
T ss_pred             -----------ccCCCcchHHHHHHHHHHHHHHHhhc-----CCCeEEEEEeCCccccccccccCCccc---------cc
Confidence                       67788899999999999999999554     679999999999999999876543211         12


Q ss_pred             CCCCHHHHHHHHHHHhcCCC-CCcccEEeCCCCccc
Q 017812          296 LLQSPEKGINSVLDAALAPP-ETSGVYFFGGKGRTV  330 (365)
Q Consensus       296 ~~~~p~e~A~~i~~~~l~~~-~~~G~~~~~~~g~~~  330 (365)
                      ++.+|+|+|+.+++++..+. ...|+.+..+.|+..
T Consensus       198 ~~~~p~dva~~v~~l~~~~~~~~~~~~~~~~~~~~~  233 (235)
T 3l77_A          198 GYLKPDEIAEAVRCLLKLPKDVRVEELMLRSVYQRP  233 (235)
T ss_dssp             TCBCHHHHHHHHHHHHTSCTTCCCCEEEECCTTSCC
T ss_pred             CCCCHHHHHHHHHHHHcCCCCCccceEEEeecccCC
Confidence            56799999999997665543 457888888877653

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=100.00  E-value=7.2e-40  Score=293.22  Aligned_cols=231  Identities=23%  Similarity=0.293  Sum_probs=186.9

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhcc
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  139 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~  139 (365)
                      |+++||||++|||+++|++|+++|++|++++|+.++++++.+++     +.++.++++|++|+++++++++++.+     
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~-----   70 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL-----GDNLYIAQLDVRNRAAIEEMLASLPA-----   70 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHTSCT-----
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----cCceEEEEcCCCCHHHHHHHHHHHHH-----
Confidence            58999999999999999999999999999999998888877776     34688999999999999999988776     


Q ss_pred             CCCCCeeEEEecCCcc---cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017812          140 DMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  216 (365)
Q Consensus       140 ~~~~~id~lv~nAG~~---~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~  216 (365)
                       .++++|+||||||+.   .+..+.+.+++++++++|+.|+++++++++|+|++++ .|+||++||.++.          
T Consensus        71 -~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~----------  138 (248)
T 3asu_A           71 -EWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERN-HGHIINIGSTAGS----------  138 (248)
T ss_dssp             -TTCCCCEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGT----------
T ss_pred             -hCCCCCEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEccchhc----------
Confidence             678999999999986   2445778999999999999999999999999998765 6899999999988          


Q ss_pred             cccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCccc-CCccccc-hhHHHHHHHHHHHHh
Q 017812          217 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVK-TNIMREV-PSFLSLMAFTVLKLL  294 (365)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~-T~~~~~~-~~~~~~~~~~~~~~~  294 (365)
                                .+.++...|++||+++++|+++++.|++   +.||+||+|+||+|+ |++.... .......  ......
T Consensus       139 ----------~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gi~v~~v~PG~v~gT~~~~~~~~~~~~~~--~~~~~~  203 (248)
T 3asu_A          139 ----------WPYAGGNVYGATKAFVRQFSLNLRTDLH---GTAVRVTDIEPGLVGGTEFSNVRFKGDDGKA--EKTYQN  203 (248)
T ss_dssp             ----------SCCTTCHHHHHHHHHHHHHHHHHHHHTT---TSCCEEEEEEECSBCC-----------------------
T ss_pred             ----------cCCCCCchHHHHHHHHHHHHHHHHHHhh---hcCcEEEEEeccccccCcchhhcccCchHHH--HHHHhc
Confidence                      7778889999999999999999999998   789999999999999 9986432 1110000  000111


Q ss_pred             cCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCC
Q 017812          295 GLLQSPEKGINSVLDAALAPPETSGVYFFGGKG  327 (365)
Q Consensus       295 ~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g  327 (365)
                      ..+.+|+|+|+.+++++..+...+|+.+....+
T Consensus       204 ~~~~~p~dvA~~v~~l~s~~~~~~g~~i~v~~~  236 (248)
T 3asu_A          204 TVALTPEDVSEAVWWVSTLPAHVNINTLEMMPV  236 (248)
T ss_dssp             -CCBCHHHHHHHHHHHHHSCTTCCCCEEEECCT
T ss_pred             cCCCCHHHHHHHHHHHhcCCccceeeEEEEccc
Confidence            234699999999998776655667877765544

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=100.00  E-value=1.7e-40  Score=298.01  Aligned_cols=232  Identities=23%  Similarity=0.284  Sum_probs=187.6

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.++++             .+.++++|++|+++++++++++.+
T Consensus        17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-------------~~~~~~~Dl~d~~~v~~~~~~~~~   83 (253)
T 2nm0_A           17 RSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE-------------GFLAVKCDITDTEQVEQAYKEIEE   83 (253)
T ss_dssp             ---CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT-------------TSEEEECCTTSHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc-------------cceEEEecCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999876432             267899999999999999999988


Q ss_pred             HHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017812          135 WLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~  212 (365)
                            .++++|+||||||+..  +..+.+.+++++++++|+.|++.++++++|.|++++ .|+||++||.++.      
T Consensus        84 ------~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~------  150 (253)
T 2nm0_A           84 ------THGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAK-KGRVVLISSVVGL------  150 (253)
T ss_dssp             ------HTCSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCCCCC------
T ss_pred             ------HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEECchhhC------
Confidence                  5689999999999863  345678899999999999999999999999998765 6899999999987      


Q ss_pred             CCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHH
Q 017812          213 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLK  292 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~  292 (365)
                                    .+.++...|++||+|++.|+++++.|++   +.||+||+|+||+|+|++......... .......
T Consensus       151 --------------~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~vn~v~PG~v~T~~~~~~~~~~~-~~~~~~~  212 (253)
T 2nm0_A          151 --------------LGSAGQANYAASKAGLVGFARSLARELG---SRNITFNVVAPGFVDTDMTKVLTDEQR-ANIVSQV  212 (253)
T ss_dssp             --------------CCHHHHHHHHHHHHHHHHHHHHHHHHHC---SSSEEEEEEEECSBCC---------CH-HHHHTTC
T ss_pred             --------------CCCCCcHHHHHHHHHHHHHHHHHHHHhh---hcCeEEEEEEeCcCcCcchhhcCHHHH-HHHHhcC
Confidence                          6677889999999999999999999998   889999999999999999765322111 1111223


Q ss_pred             HhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017812          293 LLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  330 (365)
Q Consensus       293 ~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~  330 (365)
                      |++++.+|+|+|+.+++++... ...+|+.+..++|..+
T Consensus       213 p~~~~~~p~dvA~~i~~l~s~~~~~~tG~~i~vdGG~~~  251 (253)
T 2nm0_A          213 PLGRYARPEEIAATVRFLASDDASYITGAVIPVDGGLGM  251 (253)
T ss_dssp             TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred             CCCCCcCHHHHHHHHHHHhCccccCCcCcEEEECCcccc
Confidence            5678899999999999655432 2568999999988643

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=100.00  E-value=5.3e-40  Score=302.49  Aligned_cols=272  Identities=19%  Similarity=0.171  Sum_probs=216.7

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHH
Q 017812           54 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  133 (365)
Q Consensus        54 ~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~  133 (365)
                      ..++++|+++||||++|||+++|++|+++|++|++++|+.++++++.+++.+.. +.++.++++|++|.++++++++++.
T Consensus        21 ~~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~   99 (302)
T 1w6u_A           21 PNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQT-GNKVHAIQCDVRDPDMVQNTVSELI   99 (302)
T ss_dssp             TTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-SSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCceEEEEeCCCCHHHHHHHHHHHH
Confidence            346889999999999999999999999999999999999999888888887653 3478999999999999999999998


Q ss_pred             HHHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017812          134 QWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  211 (365)
Q Consensus       134 ~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~  211 (365)
                      +      .++++|+||||||+..  +..+.+.+++++.+++|+.|++.++++++|.|.++...++||++||..+.     
T Consensus       100 ~------~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~-----  168 (302)
T 1w6u_A          100 K------VAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAE-----  168 (302)
T ss_dssp             H------HTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHH-----
T ss_pred             H------HcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccc-----
Confidence            8      5689999999999853  34467899999999999999999999999999743336899999999887     


Q ss_pred             cCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCC-ccccchh-HHHHHHHH
Q 017812          212 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTN-IMREVPS-FLSLMAFT  289 (365)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~-~~~~~~~-~~~~~~~~  289 (365)
                                     .+.++...|++||++++.++++++.++.   +.||++++++||++.|+ +...... ........
T Consensus       169 ---------------~~~~~~~~Y~~sK~a~~~~~~~la~~~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~  230 (302)
T 1w6u_A          169 ---------------TGSGFVVPSASAKAGVEAMSKSLAAEWG---KYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMI  230 (302)
T ss_dssp             ---------------HCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECCBCC------CCTTSHHHHHHH
T ss_pred             ---------------cCCCCcchhHHHHHHHHHHHHHHHHHhh---hcCcEEEEEeeccCCCcchhhhcccchhhHHHHH
Confidence                           6677888999999999999999999997   78999999999999998 5443321 11111112


Q ss_pred             HHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccccCCcc-cCCHHHHHHHHHHHHHhhhc
Q 017812          290 VLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVNSSAL-SFNSKLAGELWTTSCNLFIN  355 (365)
Q Consensus       290 ~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~~~~~~-~~d~~~~~~lw~~~~~~~~~  355 (365)
                      ...|.+++.+|+|+|+++++++... ...+|+.+..++|+....... ....+...+.|+.++++++.
T Consensus       231 ~~~p~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  298 (302)
T 1w6u_A          231 GRIPCGRLGTVEELANLAAFLCSDYASWINGAVIKFDGGEEVLISGEFNDLRKVTKEQWDTIEELIRK  298 (302)
T ss_dssp             TTCTTSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTHHHHHHSTTGGGGGCCHHHHHHHTTC---
T ss_pred             hcCCcCCCCCHHHHHHHHHHHcCCcccccCCCEEEECCCeeeccCCccccchhhccccccChhhhccC
Confidence            2245677889999999999554322 234799999999987654333 22344566789999888654

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=100.00  E-value=1.5e-40  Score=308.97  Aligned_cols=241  Identities=20%  Similarity=0.233  Sum_probs=202.5

Q ss_pred             CCCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecC----------chhHHHHHHHHHhhcCCCceEEEEecCCCh
Q 017812           53 PITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRS----------SHLLSETMADITSRNKDARLEAFQVDLSSF  122 (365)
Q Consensus        53 ~~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~----------~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~  122 (365)
                      .+.+++||++|||||++|||+++|++|+++|++|++++|+          .+.++++.+++...  +.++.++++|++|+
T Consensus        21 ~m~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~   98 (322)
T 3qlj_A           21 SMGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAA--GGEAVADGSNVADW   98 (322)
T ss_dssp             -CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHT--TCEEEEECCCTTSH
T ss_pred             hhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhc--CCcEEEEECCCCCH
Confidence            3556899999999999999999999999999999999998          77888888888766  46889999999999


Q ss_pred             hhHHHHHHHHHHHHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCC-----CCC
Q 017812          123 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP-----VPS  195 (365)
Q Consensus       123 ~~v~~~~~~~~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~-----~~g  195 (365)
                      ++++++++++.+      .++++|+||||||+..  +..+.+.++|++++++|+.|+++++++++|+|.+.+     ..|
T Consensus        99 ~~v~~~~~~~~~------~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g  172 (322)
T 3qlj_A           99 DQAAGLIQTAVE------TFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDG  172 (322)
T ss_dssp             HHHHHHHHHHHH------HHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCE
T ss_pred             HHHHHHHHHHHH------HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCc
Confidence            999999999998      4578999999999874  345789999999999999999999999999997532     137


Q ss_pred             eEEEEcCCcccccccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCc
Q 017812          196 RIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNI  275 (365)
Q Consensus       196 ~iV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~  275 (365)
                      +||++||.++.                    .+.++...|++||+|+++|+++++.|++   +.||+||+|+|| +.|++
T Consensus       173 ~IV~isS~~~~--------------------~~~~~~~~Y~asKaal~~l~~~la~e~~---~~gI~vn~v~PG-~~t~~  228 (322)
T 3qlj_A          173 RIINTSSGAGL--------------------QGSVGQGNYSAAKAGIATLTLVGAAEMG---RYGVTVNAIAPS-ARTRM  228 (322)
T ss_dssp             EEEEECCHHHH--------------------HCBTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEEC-TTSCC
T ss_pred             EEEEEcCHHHc--------------------cCCCCCccHHHHHHHHHHHHHHHHHHhc---ccCcEEEEecCC-CCCcc
Confidence            99999999988                    6778889999999999999999999998   789999999999 99999


Q ss_pred             cccchhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhcCCC---CCcccEEeCCCCcccc
Q 017812          276 MREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRTVN  331 (365)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~p~e~A~~i~~~~l~~~---~~~G~~~~~~~g~~~~  331 (365)
                      ...........    .....+..+|+|+|++++  +|.++   ..+|+.+.+|+|....
T Consensus       229 ~~~~~~~~~~~----~~~~~~~~~pedva~~v~--~L~s~~~~~itG~~i~vdGG~~~~  281 (322)
T 3qlj_A          229 TETVFAEMMAT----QDQDFDAMAPENVSPLVV--WLGSAEARDVTGKVFEVEGGKIRV  281 (322)
T ss_dssp             SCCSCCC------------CCTTCGGGTHHHHH--HHTSGGGGGCCSCEEEEETTEEEE
T ss_pred             chhhhhhhhhc----cccccCCCCHHHHHHHHH--HHhCccccCCCCCEEEECCCcccc
Confidence            87543221110    011124569999999999  44454   4589999999998663

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=100.00  E-value=1.4e-39  Score=293.39  Aligned_cols=246  Identities=20%  Similarity=0.294  Sum_probs=205.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEec-CchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGR-SSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      ++++|+++||||++|||+++|++|+++|++|++++| +.++++++.+++...  +.++.++.+|++|+++++++++++.+
T Consensus         4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (261)
T 1gee_A            4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKV--GGEAIAVKGDVTVESDVINLVQSAIK   81 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999 888888888887654  45788999999999999999999988


Q ss_pred             HHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017812          135 WLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~  212 (365)
                            .++++|+||||||+..  +..+.+.+++++++++|+.|++.++++++|.|.+++..++||++||..+.      
T Consensus        82 ------~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~------  149 (261)
T 1gee_A           82 ------EFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEK------  149 (261)
T ss_dssp             ------HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGT------
T ss_pred             ------HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhc------
Confidence                  4578999999999864  34567899999999999999999999999999876435899999999887      


Q ss_pred             CCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHH-HHHHHHH
Q 017812          213 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLS-LMAFTVL  291 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~-~~~~~~~  291 (365)
                                    .+.++...|++||+|++.++++++.|++   +.||++++++||++.|++.+....... .......
T Consensus       150 --------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~  212 (261)
T 1gee_A          150 --------------IPWPLFVHYAASKGGMKLMTETLALEYA---PKGIRVNNIGPGAINTPINAEKFADPEQRADVESM  212 (261)
T ss_dssp             --------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTT
T ss_pred             --------------CCCCCccHHHHHHHHHHHHHHHHHHHhc---ccCeEEEEEeeCCcCCchhhhcccChhHHHHHHhc
Confidence                          6778889999999999999999999997   789999999999999998764321111 1111112


Q ss_pred             HHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccccC
Q 017812          292 KLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVNS  332 (365)
Q Consensus       292 ~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~~~  332 (365)
                      .|++++.+|+|+|+.+++++... ...+|+.+..++|....+
T Consensus       213 ~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~  254 (261)
T 1gee_A          213 IPMGYIGEPEEIAAVAAWLASSEASYVTGITLFADGGMTLYP  254 (261)
T ss_dssp             CTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCG
T ss_pred             CCCCCCcCHHHHHHHHHHHhCccccCCCCcEEEEcCCcccCC
Confidence            35667889999999999765432 356899999999987643

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=100.00  E-value=1.6e-39  Score=291.44  Aligned_cols=233  Identities=21%  Similarity=0.201  Sum_probs=182.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+.         +.   ..+.++.+|++|+++++++++++.+ 
T Consensus         4 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~---------~~---~~~~~~~~D~~d~~~~~~~~~~~~~-   70 (250)
T 2fwm_X            4 DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ---------EQ---YPFATEVMDVADAAQVAQVCQRLLA-   70 (250)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS---------SC---CSSEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh---------hc---CCceEEEcCCCCHHHHHHHHHHHHH-
Confidence            3679999999999999999999999999999999998752         11   1278899999999999999999988 


Q ss_pred             HhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                           .++++|+||||||+..  +..+.+.+++++++++|+.|+++++++++|+|++++ .|+||++||.++.       
T Consensus        71 -----~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~-------  137 (250)
T 2fwm_X           71 -----ETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQR-GGAIVTVASDAAH-------  137 (250)
T ss_dssp             -----HCSCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGT-------
T ss_pred             -----HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcC-CCEEEEECchhhC-------
Confidence                 5689999999999863  445778999999999999999999999999998765 6899999999988       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHH-HH-HHHH-
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLS-LM-AFTV-  290 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~-~~-~~~~-  290 (365)
                                   .+.++...|++||++++.|+++++.|++   +.||+||+|+||+++|++.+....... .. .... 
T Consensus       138 -------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~  201 (250)
T 2fwm_X          138 -------------TPRIGMSAYGASKAALKSLALSVGLELA---GSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGF  201 (250)
T ss_dssp             -------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEECCC----------------------
T ss_pred             -------------CCCCCCchHHHHHHHHHHHHHHHHHHhC---ccCCEEEEEECCcccCccccccccChhHHHHHHhhh
Confidence                         7778889999999999999999999998   789999999999999998764311100 00 1111 


Q ss_pred             ------HHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017812          291 ------LKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  330 (365)
Q Consensus       291 ------~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~  330 (365)
                            ..|++++.+|+|+|+.+++++... ...+|+.+..++|..+
T Consensus       202 ~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~~  248 (250)
T 2fwm_X          202 GEQFKLGIPLGKIARPQEIANTILFLASDLASHITLQDIVVDGGSTL  248 (250)
T ss_dssp             --------------CHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTT
T ss_pred             hhcccccCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCccc
Confidence                  346778899999999999655432 3568999999988643

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=4.3e-40  Score=298.54  Aligned_cols=239  Identities=23%  Similarity=0.300  Sum_probs=190.4

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      .+++ |++|||||++|||+++|++|+++|++|++++|+.++++++.+++...   .++.++++|++|.++++++++++.+
T Consensus        18 ~~~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~   93 (272)
T 2nwq_A           18 SHMS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK---TRVLPLTLDVRDRAAMSAAVDNLPE   93 (272)
T ss_dssp             ---C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT---SCEEEEECCTTCHHHHHHHHHTCCG
T ss_pred             CCcC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcC---CcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            4567 99999999999999999999999999999999999888888877542   4788999999999999999998776


Q ss_pred             HHhccCCCCCeeEEEecCCccc---CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCC-eEEEEcCCccccccc
Q 017812          135 WLLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPS-RIVNVTSFTHRNVFN  210 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g-~iV~vsS~~~~~~~~  210 (365)
                            .++++|+||||||+..   +..+.+.+++++++++|+.|+++++++++|.|++++ .| +||++||.++.    
T Consensus        94 ------~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~~IV~isS~~~~----  162 (272)
T 2nwq_A           94 ------EFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHG-AGASIVNLGSVAGK----  162 (272)
T ss_dssp             ------GGSSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-TTCEEEEECCGGGT----
T ss_pred             ------HhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEeCCchhc----
Confidence                  5688999999999853   445788999999999999999999999999998765 57 99999999988    


Q ss_pred             ccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHH
Q 017812          211 AQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTV  290 (365)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~  290 (365)
                                      .+.++...|++||+|++.|+++++.|++   +.||+||+|+||+|+|++.......... ....
T Consensus       163 ----------------~~~~~~~~Y~asKaa~~~l~~~la~el~---~~gIrvn~v~PG~v~T~~~~~~~~~~~~-~~~~  222 (272)
T 2nwq_A          163 ----------------WPYPGSHVYGGTKAFVEQFSLNLRCDLQ---GTGVRVTNLEPGLCESEFSLVRFGGDQA-RYDK  222 (272)
T ss_dssp             ----------------SCCTTCHHHHHHHHHHHHHHHHHHTTCT---TSCCEEEEEEECSBC------------------
T ss_pred             ----------------cCCCCCchHHHHHHHHHHHHHHHHHHhC---ccCeEEEEEEcCCCcCcchhcccccchH-HHHH
Confidence                            6778889999999999999999999998   7899999999999999987532110000 0000


Q ss_pred             HHHhcCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCc
Q 017812          291 LKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGR  328 (365)
Q Consensus       291 ~~~~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~  328 (365)
                      ......+.+|+|+|+.+++++..+...+|+.+..+.|.
T Consensus       223 ~~~~~~~~~pedvA~~v~~l~s~~~~~~g~~i~v~~~~  260 (272)
T 2nwq_A          223 TYAGAHPIQPEDIAETIFWIMNQPAHLNINSLEIMPVS  260 (272)
T ss_dssp             ---CCCCBCHHHHHHHHHHHHTSCTTEEEEEEEEEETT
T ss_pred             hhccCCCCCHHHHHHHHHHHhCCCccCccceEEEeecc
Confidence            01112357999999999977765556678777666553

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=100.00  E-value=1.6e-39  Score=293.57  Aligned_cols=240  Identities=19%  Similarity=0.223  Sum_probs=199.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.++++++.+++     +.++.++++|++|+++++++++++.+ 
T Consensus         9 ~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~-   82 (265)
T 2o23_A            9 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL-----GNNCVFAPADVTSEKDVQTALALAKG-   82 (265)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh-----CCceEEEEcCCCCHHHHHHHHHHHHH-
Confidence            478999999999999999999999999999999999998888877776     45789999999999999999999988 


Q ss_pred             HhccCCCCCeeEEEecCCcccCC--C------CCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCC-----CCCeEEEEcC
Q 017812          136 LLDSDMHSSIQLLINNAGILATS--S------RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP-----VPSRIVNVTS  202 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~~~--~------~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~-----~~g~iV~vsS  202 (365)
                           .++++|+||||||+....  .      +.+.+++++++++|+.+++.++++++|.|+++.     ..++||++||
T Consensus        83 -----~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS  157 (265)
T 2o23_A           83 -----KFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTAS  157 (265)
T ss_dssp             -----HHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECC
T ss_pred             -----HCCCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCC
Confidence                 457899999999986432  1      368899999999999999999999999998761     2689999999


Q ss_pred             CcccccccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH
Q 017812          203 FTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF  282 (365)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~  282 (365)
                      ..+.                    .+.++...|++||++++.++++++.|+.   +.||+|++|+||+++|++.+..+..
T Consensus       158 ~~~~--------------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~  214 (265)
T 2o23_A          158 VAAF--------------------EGQVGQAAYSASKGGIVGMTLPIARDLA---PIGIRVMTIAPGLFGTPLLTSLPEK  214 (265)
T ss_dssp             THHH--------------------HCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECCBCCC--------
T ss_pred             hhhc--------------------CCCCCCchhHHHHHHHHHHHHHHHHHHh---hcCcEEEEEEeccccCccccccCHH
Confidence            9987                    6677889999999999999999999998   7899999999999999997654321


Q ss_pred             HHHHHHHHHHHh-cCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcccc
Q 017812          283 LSLMAFTVLKLL-GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  331 (365)
Q Consensus       283 ~~~~~~~~~~~~-~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~~  331 (365)
                      .. .......|+ +++.+|+|+|+.+++++ .++..+|+.+..++|..+.
T Consensus       215 ~~-~~~~~~~~~~~~~~~~~dva~~~~~l~-~~~~~~G~~i~vdgG~~~~  262 (265)
T 2o23_A          215 VC-NFLASQVPFPSRLGDPAEYAHLVQAII-ENPFLNGEVIRLDGAIRMQ  262 (265)
T ss_dssp             ---CHHHHTCSSSCSCBCHHHHHHHHHHHH-HCTTCCSCEEEESTTCCCC
T ss_pred             HH-HHHHHcCCCcCCCCCHHHHHHHHHHHh-hcCccCceEEEECCCEecC
Confidence            11 111122344 67889999999999876 4567789999999987653

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=100.00  E-value=2.4e-39  Score=300.26  Aligned_cols=232  Identities=19%  Similarity=0.246  Sum_probs=189.1

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHH
Q 017812           54 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  133 (365)
Q Consensus        54 ~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~  133 (365)
                      +.+++||+|||||||||||+++|++|+++|++|++++|+.++++++.+++...+.+.++.++.+|++|.++++++++++.
T Consensus         3 m~~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   82 (319)
T 3ioy_A            3 LKDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVE   82 (319)
T ss_dssp             CCCCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            34678999999999999999999999999999999999999999999999887655689999999999999999999998


Q ss_pred             HHHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcC-----CCCCeEEEEcCCccc
Q 017812          134 QWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNS-----PVPSRIVNVTSFTHR  206 (365)
Q Consensus       134 ~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~-----~~~g~iV~vsS~~~~  206 (365)
                      +      .++++|+||||||+..  +..+.+.+++++++++|+.|+++++++++|.|.++     ...|+||++||.++.
T Consensus        83 ~------~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~  156 (319)
T 3ioy_A           83 A------RFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAF  156 (319)
T ss_dssp             H------HTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGT
T ss_pred             H------hCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccc
Confidence            8      5689999999999863  45677999999999999999999999999999764     126899999999998


Q ss_pred             ccccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHH
Q 017812          207 NVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLM  286 (365)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~  286 (365)
                                          .+.++...|++||+|+++|+++++.|+.   +.||+|++|+||+|+|++...........
T Consensus       157 --------------------~~~~~~~~Y~aSKaal~~~~~~la~e~~---~~gi~v~~v~PG~v~T~~~~~~~~~~~~~  213 (319)
T 3ioy_A          157 --------------------LAAGSPGIYNTTKFAVRGLSESLHYSLL---KYEIGVSVLCPGLVKSYIYASDDIRPDAL  213 (319)
T ss_dssp             --------------------CCCSSSHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEECCCCBC--------------
T ss_pred             --------------------cCCCCCHHHHHHHHHHHHHHHHHHHHhh---hcCCEEEEEEcCeEccCcccccccCchhh
Confidence                                7788889999999999999999999998   78999999999999999976432211100


Q ss_pred             H-------HHHHHHh----cCCCCHHHHHHHHHHHhcCC
Q 017812          287 A-------FTVLKLL----GLLQSPEKGINSVLDAALAP  314 (365)
Q Consensus       287 ~-------~~~~~~~----~~~~~p~e~A~~i~~~~l~~  314 (365)
                      .       .......    ....+|+++|+.++.++..+
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~pe~vA~~~~~al~~~  252 (319)
T 3ioy_A          214 KGEVKPVDKTAVERLAGVHEFGMEPDVIGARVIEAMKAN  252 (319)
T ss_dssp             ---------------CCGGGSSBCHHHHHHHHHHHHHTT
T ss_pred             cccccchhHHHHHHHHHhhhcCCCHHHHHHHHHHHHHcC
Confidence            0       0000000    11269999999999876553

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=100.00  E-value=1.9e-39  Score=293.36  Aligned_cols=245  Identities=23%  Similarity=0.240  Sum_probs=184.3

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.++++++.+++...  +.++.++.+|++|.++++++++++.+
T Consensus        10 ~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   87 (266)
T 1xq1_A           10 WSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK--GFQVTGSVCDASLRPEREKLMQTVSS   87 (266)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeeEEEECCCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999999888888888665  45788999999999999999999887


Q ss_pred             HHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017812          135 WLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~  212 (365)
                      .+     .+++|+||||||+..  +..+.+.+++++.+++|+.|++.++++++|.|++++ .++||++||.++.      
T Consensus        88 ~~-----~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~------  155 (266)
T 1xq1_A           88 MF-----GGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASG-CGNIIFMSSIAGV------  155 (266)
T ss_dssp             HH-----TTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-SCEEEEEC-----------
T ss_pred             Hh-----CCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEccchhc------
Confidence            32     167999999999863  345678999999999999999999999999998765 6899999999987      


Q ss_pred             CCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHH
Q 017812          213 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLK  292 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~  292 (365)
                                    .+.++...|++||++++.++++++.|++   ++||++++|+||++.|++.+...............
T Consensus       156 --------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~  218 (266)
T 1xq1_A          156 --------------VSASVGSIYSATKGALNQLARNLACEWA---SDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRK  218 (266)
T ss_dssp             -------------------CCHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEECCSCC--------------------
T ss_pred             --------------cCCCCCchHHHHHHHHHHHHHHHHHHHh---HhCcEEEEEeeCCCccchhhhhcCHHHHHHHHhcC
Confidence                          6667788999999999999999999997   78999999999999999976532111111112234


Q ss_pred             HhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017812          293 LLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  330 (365)
Q Consensus       293 ~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~  330 (365)
                      |++++.+|+|+|+.+++++... ...+|+.+..++|...
T Consensus       219 ~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~~  257 (266)
T 1xq1_A          219 PLGRFGEPEEVSSLVAFLCMPAASYITGQTICVDGGLTV  257 (266)
T ss_dssp             -----CCGGGGHHHHHHHTSGGGTTCCSCEEECCCCEEE
T ss_pred             CCCCCcCHHHHHHHHHHHcCccccCccCcEEEEcCCccc
Confidence            6677889999999999544322 2457999999999765

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=100.00  E-value=9e-40  Score=292.45  Aligned_cols=232  Identities=20%  Similarity=0.248  Sum_probs=189.3

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.+++++             +..+++|++|+++++++++++.+
T Consensus        11 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-------------~~~~~~D~~~~~~~~~~~~~~~~   77 (247)
T 1uzm_A           11 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG-------------LFGVEVDVTDSDAVDRAFTAVEE   77 (247)
T ss_dssp             CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT-------------SEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH-------------hcCeeccCCCHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999998764321             12488999999999999999988


Q ss_pred             HHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017812          135 WLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~  212 (365)
                            .++++|+||||||+..  +..+.+.+++++++++|+.|+++++++++|.|++++ .|+||++||.++.      
T Consensus        78 ------~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~------  144 (247)
T 1uzm_A           78 ------HQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNK-FGRMIFIGSVSGL------  144 (247)
T ss_dssp             ------HHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCCC-------
T ss_pred             ------HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEECCHhhc------
Confidence                  4578999999999864  345788999999999999999999999999998765 6899999999987      


Q ss_pred             CCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHH
Q 017812          213 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLK  292 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~  292 (365)
                                    .+.++...|++||+|++.|+++++.|++   +.||+||+|+||+++|++.+....... .......
T Consensus       145 --------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~PG~v~t~~~~~~~~~~~-~~~~~~~  206 (247)
T 1uzm_A          145 --------------WGIGNQANYAASKAGVIGMARSIARELS---KANVTANVVAPGYIDTDMTRALDERIQ-QGALQFI  206 (247)
T ss_dssp             ------------------CCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCCHHHHHSCHHHH-HHHGGGC
T ss_pred             --------------cCCCCChhHHHHHHHHHHHHHHHHHHhh---hcCcEEEEEEeCCCcccchhhcCHHHH-HHHHhcC
Confidence                          6677889999999999999999999998   789999999999999998765432111 1111223


Q ss_pred             HhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017812          293 LLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  330 (365)
Q Consensus       293 ~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~  330 (365)
                      |++++.+|+|+|+.+++++... ...+|+.+..++|...
T Consensus       207 p~~~~~~~~dvA~~~~~l~s~~~~~~~G~~i~vdgG~~~  245 (247)
T 1uzm_A          207 PAKRVGTPAEVAGVVSFLASEDASYISGAVIPVDGGMGM  245 (247)
T ss_dssp             TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred             CCCCCcCHHHHHHHHHHHcCccccCCcCCEEEECCCccc
Confidence            5678899999999999655432 3568999999988643

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=100.00  E-value=1.5e-39  Score=289.58  Aligned_cols=230  Identities=18%  Similarity=0.187  Sum_probs=190.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhc
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  138 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~  138 (365)
                      +|+++||||++|||+++|++|+++|++|++++|+.++   ..+++     +  +.++++|++| ++++++++++.+    
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~---~~~~~-----~--~~~~~~D~~~-~~~~~~~~~~~~----   66 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE---AAQSL-----G--AVPLPTDLEK-DDPKGLVKRALE----   66 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH---HHHHH-----T--CEEEECCTTT-SCHHHHHHHHHH----
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHhh-----C--cEEEecCCch-HHHHHHHHHHHH----
Confidence            6899999999999999999999999999999999875   23333     2  6789999999 999999999887    


Q ss_pred             cCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017812          139 SDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  216 (365)
Q Consensus       139 ~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~  216 (365)
                        .++++|+||||||+..  +..+.+.+++++++++|+.|+++++++++|.|++++ .|+||++||.++.          
T Consensus        67 --~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~----------  133 (239)
T 2ekp_A           67 --ALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAG-WGRVLFIGSVTTF----------  133 (239)
T ss_dssp             --HHTSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT----------
T ss_pred             --HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhc----------
Confidence              4478999999999863  455779999999999999999999999999998765 6899999999887          


Q ss_pred             cccccccccCCCC--ChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHH-HHHHHHHHH
Q 017812          217 TITGKFFLRSKCY--PCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLS-LMAFTVLKL  293 (365)
Q Consensus       217 ~~~~~~~~~~~~~--~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~-~~~~~~~~~  293 (365)
                                .+.  ++...|++||++++.|+++++.|++   +.||+||+|+||+++|++......... ........|
T Consensus       134 ----------~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p  200 (239)
T 2ekp_A          134 ----------TAGGPVPIPAYTTAKTALLGLTRALAKEWA---RLGIRVNLLCPGYVETEFTLPLRQNPELYEPITARIP  200 (239)
T ss_dssp             ----------SCCTTSCCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHTTCT
T ss_pred             ----------cCCCCCCCccHHHHHHHHHHHHHHHHHHhh---hcCcEEEEEEeCCccCchhhccccCHHHHHHHHhcCC
Confidence                      444  7788999999999999999999998   789999999999999998754321111 111112236


Q ss_pred             hcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017812          294 LGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  329 (365)
Q Consensus       294 ~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~  329 (365)
                      ++++.+|+|+|+.+++++... ...+|+.+..++|..
T Consensus       201 ~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~~  237 (239)
T 2ekp_A          201 MGRWARPEEIARVAAVLCGDEAEYLTGQAVAVDGGFL  237 (239)
T ss_dssp             TSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTT
T ss_pred             CCCCcCHHHHHHHHHHHcCchhcCCCCCEEEECCCcc
Confidence            678899999999999544321 246899999998854

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=100.00  E-value=4.5e-39  Score=289.82  Aligned_cols=242  Identities=18%  Similarity=0.219  Sum_probs=202.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.++++++.+++...  +.++.++++|++|+++++++++++.+ 
T Consensus        10 ~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~-   86 (260)
T 3awd_A           10 RLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRME--GHDVSSVVMDVTNTESVQNAVRSVHE-   86 (260)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHH-
Confidence            478999999999999999999999999999999999999888888888665  45789999999999999999999988 


Q ss_pred             HhccCCCCCeeEEEecCCccc---CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017812          136 LLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~  212 (365)
                           .++++|+||||||+..   +..+.+.+++++.+++|+.|++.++++++|.|.+++ .++||++||..+.      
T Consensus        87 -----~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~------  154 (260)
T 3awd_A           87 -----QEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQK-QGVIVAIGSMSGL------  154 (260)
T ss_dssp             -----HHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT------
T ss_pred             -----HcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcC-CCEEEEEecchhc------
Confidence                 4578999999999864   345678999999999999999999999999998765 6899999999877      


Q ss_pred             CCCccccccccccCCCCChh--hhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccc-cchhHHHHHHHH
Q 017812          213 VNNETITGKFFLRSKCYPCA--RIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMR-EVPSFLSLMAFT  289 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~--~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~-~~~~~~~~~~~~  289 (365)
                                    .+.++.  ..|++||++++.++++++.|+.   +.||++++|+||++.|++.+ ............
T Consensus       155 --------------~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~---~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~  217 (260)
T 3awd_A          155 --------------IVNRPQQQAAYNASKAGVHQYIRSLAAEWA---PHGIRANAVAPTYIETTLTRFGMEKPELYDAWI  217 (260)
T ss_dssp             --------------SCCSSSCCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECCBCCTTTHHHHTCHHHHHHHH
T ss_pred             --------------ccCCCCCccccHHHHHHHHHHHHHHHHHhh---hcCeEEEEEEeeeeccchhhcccCChHHHHHHH
Confidence                          444444  8999999999999999999997   78999999999999999876 322111111112


Q ss_pred             HHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017812          290 VLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  329 (365)
Q Consensus       290 ~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~  329 (365)
                      ...|++++.+|+|+|+.+++++... ...+|+.+..++|..
T Consensus       218 ~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~  258 (260)
T 3awd_A          218 AGTPMGRVGQPDEVASVVQFLASDAASLMTGAIVNVDAGFT  258 (260)
T ss_dssp             HTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             hcCCcCCCCCHHHHHHHHHHHhCchhccCCCcEEEECCcee
Confidence            2235678889999999999765432 356899998888854

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=100.00  E-value=1.1e-39  Score=295.51  Aligned_cols=237  Identities=14%  Similarity=0.153  Sum_probs=193.8

Q ss_pred             CCCCCEEEEecC--CChHHHHHHHHHHHCCCEEEEEecCchh-HHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHH
Q 017812           56 GIKRPVCIVTGA--TSGLGAAAAYALSREGFHVVLVGRSSHL-LSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  132 (365)
Q Consensus        56 ~~~~k~vlITGa--ssGIG~~~a~~la~~G~~Vil~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~  132 (365)
                      ++++|+++||||  ++|||+++|++|+++|++|++++|+.++ ++++.+++     +.++.++++|++|+++++++++++
T Consensus         4 ~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~   78 (269)
T 2h7i_A            4 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRL-----PAKAPLLELDVQNEEHLASLAGRV   78 (269)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTS-----SSCCCEEECCTTCHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhc-----CCCceEEEccCCCHHHHHHHHHHH
Confidence            478999999999  9999999999999999999999999865 34433322     346789999999999999999999


Q ss_pred             HHHHhccCCCC---CeeEEEecCCccc-------CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcC
Q 017812          133 QQWLLDSDMHS---SIQLLINNAGILA-------TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS  202 (365)
Q Consensus       133 ~~~~~~~~~~~---~id~lv~nAG~~~-------~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS  202 (365)
                      .+.      ++   ++|+||||||+..       +..+.+.++|++++++|+.|+++++++++|+|++   .|+||++||
T Consensus        79 ~~~------~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~iss  149 (269)
T 2h7i_A           79 TEA------IGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP---GGSIVGMDF  149 (269)
T ss_dssp             HHH------HCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEEC
T ss_pred             HHH------hCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc---CCeEEEEcC
Confidence            884      45   8999999999864       3456789999999999999999999999999975   379999999


Q ss_pred             CcccccccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc---
Q 017812          203 FTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV---  279 (365)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~---  279 (365)
                      ..+                     .+.+.+..|++||+|+++|+++++.|++   +.||+||+|+||+|+|++.+..   
T Consensus       150 ~~~---------------------~~~~~~~~Y~asKaa~~~l~~~la~e~~---~~gi~vn~v~PG~v~T~~~~~~~~~  205 (269)
T 2h7i_A          150 DPS---------------------RAMPAYNWMTVAKSALESVNRFVAREAG---KYGVRSNLVAAGPIRTLAMSAIVGG  205 (269)
T ss_dssp             CCS---------------------SCCTTTHHHHHHHHHHHHHHHHHHHHHH---TTTCEEEEEEECCCCCHHHHHHHTT
T ss_pred             ccc---------------------cccCchHHHHHHHHHHHHHHHHHHHHhc---ccCcEEEEEecCcccchhhhccccc
Confidence            764                     3456778999999999999999999998   7899999999999999986542   


Q ss_pred             --hhHH-H-----HHHHHHHHHhc-CCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017812          280 --PSFL-S-----LMAFTVLKLLG-LLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  330 (365)
Q Consensus       280 --~~~~-~-----~~~~~~~~~~~-~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~  330 (365)
                        +... .     ........|++ |+.+|+|+|+.+++++... ...+|+.+.+|+|...
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~p~~rr~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~~  266 (269)
T 2h7i_A          206 ALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVAKTVCALLSDWLPATTGDIIYADGGAHT  266 (269)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHCTTCCCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTGGG
T ss_pred             cchhhHHHHHHHHHHhhhccCCcccCCCCHHHHHHHHHHHhCchhccCcceEEEecCCeee
Confidence              1110 0     01122234677 6899999999999655321 3568999999998654

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=100.00  E-value=2.8e-39  Score=289.44  Aligned_cols=240  Identities=21%  Similarity=0.208  Sum_probs=200.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhc
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  138 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~  138 (365)
                      +|+++||||++|||+++|++|+++|++|++++|+.++++++.+++.... +.++.++++|++|+++++++++++.+    
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~----   76 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAY-ADKVLRVRADVADEGDVNAAIAATME----   76 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTT-GGGEEEEECCTTCHHHHHHHHHHHHH----
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCcEEEEEecCCCHHHHHHHHHHHHH----
Confidence            6899999999999999999999999999999999988888877772222 35789999999999999999999988    


Q ss_pred             cCCCCCeeEEEecCCcccC-----CCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          139 SDMHSSIQLLINNAGILAT-----SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       139 ~~~~~~id~lv~nAG~~~~-----~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                        .++++|+||||||+...     ..+.+.+++++++++|+.|++.+++.++|.|++++ .++||++||.++.       
T Consensus        77 --~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~-------  146 (250)
T 2cfc_A           77 --QFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQG-AGVIVNIASVASL-------  146 (250)
T ss_dssp             --HHSCCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT-------
T ss_pred             --HhCCCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECChhhc-------
Confidence              45789999999998643     34668899999999999999999999999998765 6899999999987       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcccc-chhHHHHHHHHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE-VPSFLSLMAFTVLK  292 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~-~~~~~~~~~~~~~~  292 (365)
                                   .+.++...|++||++++.|+++++.|+.   +.||++++++||++.|++.+. ..............
T Consensus       147 -------------~~~~~~~~Y~~sK~a~~~~~~~l~~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~  210 (250)
T 2cfc_A          147 -------------VAFPGRSAYTTSKGAVLQLTKSVAVDYA---GSGIRCNAVCPGMIETPMTQWRLDQPELRDQVLARI  210 (250)
T ss_dssp             -------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCSTTTHHHHTSHHHHHHHHTTC
T ss_pred             -------------cCCCCchhHHHHHHHHHHHHHHHHHHhc---ccCeEEEEEEeCcCccCccccccCCHHHHHHHHhcC
Confidence                         6777889999999999999999999997   789999999999999998754 21111111111223


Q ss_pred             HhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017812          293 LLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  329 (365)
Q Consensus       293 ~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~  329 (365)
                      |++++.+|+|+|+.+++++... ...+|+.+..++|..
T Consensus       211 ~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~  248 (250)
T 2cfc_A          211 PQKEIGTAAQVADAVMFLAGEDATYVNGAALVMDGAYT  248 (250)
T ss_dssp             TTCSCBCHHHHHHHHHHHHSTTCTTCCSCEEEESTTGG
T ss_pred             CCCCCcCHHHHHHHHHHHcCchhhcccCCEEEECCcee
Confidence            5678889999999999765433 256799999888864

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=100.00  E-value=4.9e-40  Score=306.48  Aligned_cols=255  Identities=11%  Similarity=-0.001  Sum_probs=206.2

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHH-CCCEEEEEecCchhHH------------HHHHHHHhhcCCCceEEEEecCCChh
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSR-EGFHVVLVGRSSHLLS------------ETMADITSRNKDARLEAFQVDLSSFQ  123 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~-~G~~Vil~~r~~~~~~------------~~~~~l~~~~~~~~~~~~~~Dls~~~  123 (365)
                      -.+|++||||||+|||+++|+.|++ .|++|++++|+.+..+            .+.+++.+.  +.++..+.+|++|++
T Consensus        45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~--G~~a~~i~~Dvtd~~  122 (405)
T 3zu3_A           45 NGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQK--GLYAKSINGDAFSDE  122 (405)
T ss_dssp             TCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHT--TCCEEEEESCTTSHH
T ss_pred             CCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhc--CCceEEEECCCCCHH
Confidence            3589999999999999999999999 9999999998765432            223344443  557889999999999


Q ss_pred             hHHHHHHHHHHHHhccCCCCCeeEEEecCCcc---------------cCC---------------------CCCCHHHHh
Q 017812          124 SVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL---------------ATS---------------------SRLTPEGYD  167 (365)
Q Consensus       124 ~v~~~~~~~~~~~~~~~~~~~id~lv~nAG~~---------------~~~---------------------~~~~~~~~~  167 (365)
                      +++++++++.+      .+|+||+||||||+.               .+.                     .+.++++|+
T Consensus       123 ~v~~~v~~i~~------~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~  196 (405)
T 3zu3_A          123 IKQLTIDAIKQ------DLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEID  196 (405)
T ss_dssp             HHHHHHHHHHH------HTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHH
T ss_pred             HHHHHHHHHHH------HcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHH
Confidence            99999999998      678999999999974               232                     457999999


Q ss_pred             HhHHHHhHHHH-HHHHHHhH-hhhcCCCCCeEEEEcCCcccccccccCCCccccccccccCCCCChh--hhhhhhHHHHH
Q 017812          168 QMMSTNYIGAF-FLTKLLLP-LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCA--RIYEYSKLCLL  243 (365)
Q Consensus       168 ~~~~vN~~~~~-~l~~~~l~-~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~~sK~a~~  243 (365)
                      ++++||..+.+ ++++++.+ .|.+.  .|+||++||.++.                    .+.+.+  .+|++||+|++
T Consensus       197 ~~v~Vn~~~~~~~~~~~~~~~~m~~~--gG~IVniSSi~~~--------------------~~~p~~~~~aY~AaKaal~  254 (405)
T 3zu3_A          197 STVAVMGGEDWQMWIDALLDAGVLAE--GAQTTAFTYLGEK--------------------ITHDIYWNGSIGAAKKDLD  254 (405)
T ss_dssp             HHHHHHSSHHHHHHHHHHHHHTCEEE--EEEEEEEECCCCG--------------------GGTTTTTTSHHHHHHHHHH
T ss_pred             HHHHhhchhHHHHHHHHHHHHhhhhC--CcEEEEEeCchhh--------------------CcCCCccchHHHHHHHHHH
Confidence            99999999998 78888765 45543  4899999999987                    666766  99999999999


Q ss_pred             HHHHHHHHHhCCCCCC-CeEEEEecCCcccCCccccchhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhcCCCCCcccEE
Q 017812          244 IFSYELHRNLGLDKSR-HVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYF  322 (365)
Q Consensus       244 ~~~~~la~e~~~~~~~-gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~A~~i~~~~l~~~~~~G~~~  322 (365)
                      +++++|+.|++   +. ||+||+|+||.|.|++...++...... .....+++|..+||++|+.+.++  .++.-.|...
T Consensus       255 ~ltrsLA~Ela---~~~GIRVNaVaPG~i~T~~s~~ip~~p~y~-~~l~~~mkr~G~~Ed~a~~i~~L--~sd~l~~~~~  328 (405)
T 3zu3_A          255 QKVLAIRESLA---AHGGGDARVSVLKAVVSQASSAIPMMPLYL-SLLFKVMKEKGTHEGCIEQVYSL--YKDSLCGDSP  328 (405)
T ss_dssp             HHHHHHHHHHH---TTTSCEEEEEECCCCCCHHHHTSTTHHHHH-HHHHHHHHHHTCCCCHHHHHHHH--HHHTTSSSCC
T ss_pred             HHHHHHHHHhC---cccCeEEEEEEeCCCcCchhhcCCCCcHHH-HHHHHHHhcCCCcHHHHHHHHHH--HhccccCCCC
Confidence            99999999998   88 999999999999999988776533322 23334788899999999999954  4545555555


Q ss_pred             eCCCCccccCCcccCCHHHHHHHHH
Q 017812          323 FGGKGRTVNSSALSFNSKLAGELWT  347 (365)
Q Consensus       323 ~~~~g~~~~~~~~~~d~~~~~~lw~  347 (365)
                      ..|++.-+...+...+++.|.++-+
T Consensus       329 ~~D~~~~~r~d~~e~~~~~q~~~~~  353 (405)
T 3zu3_A          329 HMDQEGRLRADYKELDPEVQNQVQQ  353 (405)
T ss_dssp             CBCTTSCEECCHHHHCHHHHHHHHH
T ss_pred             CcCCCcCCCCchhhcCHHHHHHHHH
Confidence            5677777777777778877754433

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=100.00  E-value=6.2e-40  Score=308.62  Aligned_cols=255  Identities=11%  Similarity=0.010  Sum_probs=205.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHH-CCCEEEEEecCchhHH------------HHHHHHHhhcCCCceEEEEecCCChhh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSR-EGFHVVLVGRSSHLLS------------ETMADITSRNKDARLEAFQVDLSSFQS  124 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~-~G~~Vil~~r~~~~~~------------~~~~~l~~~~~~~~~~~~~~Dls~~~~  124 (365)
                      .+|+|||||||+|||+++|+.|++ .|++|++++|+.+.++            .+.+++.+.  +.++..+.+|++|+++
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~--G~~a~~i~~Dvtd~~~  137 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAA--GLYSKSINGDAFSDAA  137 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHT--TCCEEEEESCTTSHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhc--CCcEEEEEecCCCHHH
Confidence            489999999999999999999999 9999999999876433            223445444  5678899999999999


Q ss_pred             HHHHHHHHHHHHhccCCC-CCeeEEEecCCcc---------------cCC---------------------CCCCHHHHh
Q 017812          125 VLKFKDSLQQWLLDSDMH-SSIQLLINNAGIL---------------ATS---------------------SRLTPEGYD  167 (365)
Q Consensus       125 v~~~~~~~~~~~~~~~~~-~~id~lv~nAG~~---------------~~~---------------------~~~~~~~~~  167 (365)
                      ++++++++.+      .+ |+||+||||||+.               .+.                     .+.+.++|+
T Consensus       138 v~~~v~~i~~------~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~  211 (422)
T 3s8m_A          138 RAQVIELIKT------EMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIE  211 (422)
T ss_dssp             HHHHHHHHHH------HSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHH
T ss_pred             HHHHHHHHHH------HcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHH
Confidence            9999999998      67 8999999999972               122                     246899999


Q ss_pred             HhHHHHhHHHH-HHHHHHhHh-hhcCCCCCeEEEEcCCcccccccccCCCccccccccccCCCCChh--hhhhhhHHHHH
Q 017812          168 QMMSTNYIGAF-FLTKLLLPL-LKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCA--RIYEYSKLCLL  243 (365)
Q Consensus       168 ~~~~vN~~~~~-~l~~~~l~~-~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~~sK~a~~  243 (365)
                      +++++|..+.+ ++++++.+. |.+.  .|+||++||.++.                    .+.+.+  .+|++||+|++
T Consensus       212 ~~v~Vn~~~~~~~~~~a~~~~~m~~~--gG~IVniSSi~g~--------------------~~~p~~~~~aY~ASKaAl~  269 (422)
T 3s8m_A          212 DTITVMGGQDWELWIDALEGAGVLAD--GARSVAFSYIGTE--------------------ITWPIYWHGALGKAKVDLD  269 (422)
T ss_dssp             HHHHHHSSHHHHHHHHHHHHTTCEEE--EEEEEEEEECCCG--------------------GGHHHHTSHHHHHHHHHHH
T ss_pred             HHHHhhchhHHHHHHHHHHHHHHhhC--CCEEEEEeCchhh--------------------ccCCCccchHHHHHHHHHH
Confidence            99999999997 788887764 4443  4899999999987                    666766  89999999999


Q ss_pred             HHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhcCCCCC-cccEE
Q 017812          244 IFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPET-SGVYF  322 (365)
Q Consensus       244 ~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~A~~i~~~~l~~~~~-~G~~~  322 (365)
                      +|+++|+.|++   +.||+||+|+||+|.|++....+....... ....|++|..+|||+|+.+.+++...-.. .|..-
T Consensus       270 ~lTrsLA~Ela---~~GIRVNaVaPG~i~T~~~~~ip~~~~~~~-~~~~~m~r~G~pEdva~~v~~L~sd~ly~~~~~~~  345 (422)
T 3s8m_A          270 RTAQRLNARLA---KHGGGANVAVLKSVVTQASAAIPVMPLYIS-MVYKIMKEKGLHEGTIEQLDRLFRERLYRQDGQPA  345 (422)
T ss_dssp             HHHHHHHHHHH---TTTCEEEEEEECCCCCTTGGGSTHHHHHHH-HHHHHHHHTTCCCCHHHHHHHHHHHTTTCTTCCCC
T ss_pred             HHHHHHHHHhC---ccCEEEEEEEcCCCcChhhhcCCCChHHHH-HHHhhhcCCcChHHHHHHHHHHhcchhhccCCCCc
Confidence            99999999998   899999999999999999988765443322 23357889999999999999655443232 25555


Q ss_pred             eCCCCccccCCcccCCHHHHHHHH
Q 017812          323 FGGKGRTVNSSALSFNSKLAGELW  346 (365)
Q Consensus       323 ~~~~g~~~~~~~~~~d~~~~~~lw  346 (365)
                      ..|++.-+...+...+++.|.++-
T Consensus       346 ~~d~~~~~r~d~~e~~~~~q~~~~  369 (422)
T 3s8m_A          346 EVDEQNRLRLDDWELRDDVQDACK  369 (422)
T ss_dssp             CCCTTSCEESCTTTTSHHHHHHHH
T ss_pred             ccCCCCCCccchhhCCHHHHHHHH
Confidence            356666667888888888875443

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=7.8e-40  Score=292.68  Aligned_cols=233  Identities=19%  Similarity=0.232  Sum_probs=189.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      ++++|+++||||++|||+++|++|+++|++|++++|++++++++. ++      .++.++++|++|+++++++.+     
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~------~~~~~~~~D~~~~~~~~~~~~-----   70 (246)
T 2ag5_A            3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KY------PGIQTRVLDVTKKKQIDQFAN-----   70 (246)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GS------TTEEEEECCTTCHHHHHHHHH-----
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hc------cCceEEEeeCCCHHHHHHHHH-----
Confidence            478999999999999999999999999999999999987665433 21      268899999999999874433     


Q ss_pred             HhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                           .++++|+||||||+..  +..+.+.++|++++++|+.|+++++++++|+|++++ .|+||++||.++.       
T Consensus        71 -----~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~-------  137 (246)
T 2ag5_A           71 -----EVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQK-SGNIINMSSVASS-------  137 (246)
T ss_dssp             -----HCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTT-------
T ss_pred             -----HhCCCCEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEechHhC-------
Confidence                 3578999999999864  345778999999999999999999999999998765 6899999999887       


Q ss_pred             CCccccccccccCCCCC-hhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc-h----hHHHHHH
Q 017812          214 NNETITGKFFLRSKCYP-CARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV-P----SFLSLMA  287 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~-~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~-~----~~~~~~~  287 (365)
                                   .+.+ +...|++||++++.++++++.|++   +.||+|++|+||++.|++.... .    .......
T Consensus       138 -------------~~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~  201 (246)
T 2ag5_A          138 -------------VKGVVNRCVYSTTKAAVIGLTKSVAADFI---QQGIRCNCVCPGTVDTPSLQERIQARGNPEEARND  201 (246)
T ss_dssp             -------------TBCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHH
T ss_pred             -------------cCCCCCCccHHHHHHHHHHHHHHHHHHhh---hcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHH
Confidence                         5555 788999999999999999999998   7899999999999999986541 1    0111111


Q ss_pred             HHHHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017812          288 FTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  329 (365)
Q Consensus       288 ~~~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~  329 (365)
                      .....|++++.+|+|+|+.+++++... ...+|+.+..++|..
T Consensus       202 ~~~~~~~~~~~~~~dvA~~v~~l~s~~~~~~tG~~i~vdgG~~  244 (246)
T 2ag5_A          202 FLKRQKTGRFATAEEIAMLCVYLASDESAYVTGNPVIIDGGWS  244 (246)
T ss_dssp             HHHTCTTSSCEEHHHHHHHHHHHHSGGGTTCCSCEEEECTTGG
T ss_pred             HHhcCCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCcc
Confidence            122236678899999999999655332 356899999998854

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=100.00  E-value=6.2e-39  Score=296.15  Aligned_cols=240  Identities=27%  Similarity=0.374  Sum_probs=191.0

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCCh-hhHHHHHHHHH
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF-QSVLKFKDSLQ  133 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~-~~v~~~~~~~~  133 (365)
                      ..+++|+||||||++|||+++|++|+++|++|++++|+.++++++.+++.+.+ +.++.++++|++|+ ++++++++.+.
T Consensus         8 ~~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~~v~~~~~~~~   86 (311)
T 3o26_A            8 TVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSN-HENVVFHQLDVTDPIATMSSLADFIK   86 (311)
T ss_dssp             ----CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT-CCSEEEEECCTTSCHHHHHHHHHHHH
T ss_pred             ccCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CCceEEEEccCCCcHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999999999999997764 45799999999998 99999999998


Q ss_pred             HHHhccCCCCCeeEEEecCCcccC--------------------------------CCCCCHHHHhHhHHHHhHHHHHHH
Q 017812          134 QWLLDSDMHSSIQLLINNAGILAT--------------------------------SSRLTPEGYDQMMSTNYIGAFFLT  181 (365)
Q Consensus       134 ~~~~~~~~~~~id~lv~nAG~~~~--------------------------------~~~~~~~~~~~~~~vN~~~~~~l~  181 (365)
                      +      .++++|+||||||+...                                ..+.+.+++++++++|+.|+++++
T Consensus        87 ~------~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~  160 (311)
T 3o26_A           87 T------HFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVT  160 (311)
T ss_dssp             H------HHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHH
T ss_pred             H------hCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHH
Confidence            8      45789999999998632                                235688999999999999999999


Q ss_pred             HHHhHhhhcCCCCCeEEEEcCCcccccccccC-------CCccccc---------------cccccCCC-CChhhhhhhh
Q 017812          182 KLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV-------NNETITG---------------KFFLRSKC-YPCARIYEYS  238 (365)
Q Consensus       182 ~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~-------~~~~~~~---------------~~~~~~~~-~~~~~~Y~~s  238 (365)
                      ++++|.|++++ .|+||++||.++........       +.+.+..               .......+ .++..+|++|
T Consensus       161 ~~~~~~l~~~~-~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~S  239 (311)
T 3o26_A          161 EVLIPLLQLSD-SPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTS  239 (311)
T ss_dssp             HHHHHHHTTSS-SCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHH
T ss_pred             HHhhHhhccCC-CCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHH
Confidence            99999998776 68999999998874321100       0000000               00000112 2466899999


Q ss_pred             HHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhcCCC-CC
Q 017812          239 KLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPP-ET  317 (365)
Q Consensus       239 K~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~A~~i~~~~l~~~-~~  317 (365)
                      |+|+++|++++++|+.     +|+|++|+||+|+|+|.+...                ..+|+++|+.+++++..++ ..
T Consensus       240 K~a~~~~~~~la~e~~-----~i~v~~v~PG~v~T~~~~~~~----------------~~~~~~~a~~~~~~~~~~~~~~  298 (311)
T 3o26_A          240 KACLNAYTRVLANKIP-----KFQVNCVCPGLVKTEMNYGIG----------------NYTAEEGAEHVVRIALFPDDGP  298 (311)
T ss_dssp             HHHHHHHHHHHHHHCT-----TSEEEEECCCSBCSGGGTTCC----------------SBCHHHHHHHHHHHHTCCSSCC
T ss_pred             HHHHHHHHHHHHhhcC-----CceEEEecCCceecCCcCCCC----------------CCCHHHHHHHHHHHHhCCCCCC
Confidence            9999999999999984     499999999999999987542                2489999999999888775 44


Q ss_pred             cccEEe
Q 017812          318 SGVYFF  323 (365)
Q Consensus       318 ~G~~~~  323 (365)
                      +|.+|.
T Consensus       299 ~g~~~~  304 (311)
T 3o26_A          299 SGFFYD  304 (311)
T ss_dssp             CSCEET
T ss_pred             CceEec
Confidence            566654

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=100.00  E-value=4.5e-39  Score=294.02  Aligned_cols=242  Identities=21%  Similarity=0.302  Sum_probs=201.7

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.++++++.+++...  +.++.++.+|++|.++++++++++.+
T Consensus        40 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~d~~~v~~~~~~~~~  117 (285)
T 2c07_A           40 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF--GYESSGYAGDVSKKEEISEVINKILT  117 (285)
T ss_dssp             CCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhc--CCceeEEECCCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999999888888888664  45788999999999999999999988


Q ss_pred             HHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017812          135 WLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~  212 (365)
                            .++++|+||||||+..  +..+.+.+++++++++|+.|++.+++.++|.|.+++ .++||++||.++.      
T Consensus       118 ------~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~------  184 (285)
T 2c07_A          118 ------EHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNR-YGRIINISSIVGL------  184 (285)
T ss_dssp             ------HCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT-CEEEEEECCTHHH------
T ss_pred             ------hcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECChhhc------
Confidence                  5688999999999863  345778999999999999999999999999998765 6899999999887      


Q ss_pred             CCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHH
Q 017812          213 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLK  292 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~  292 (365)
                                    .+.++...|++||++++.++++++.|+.   +.||++++|+||+++|++......... .......
T Consensus       185 --------------~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~-~~~~~~~  246 (285)
T 2c07_A          185 --------------TGNVGQANYSSSKAGVIGFTKSLAKELA---SRNITVNAIAPGFISSDMTDKISEQIK-KNIISNI  246 (285)
T ss_dssp             --------------HCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCC-----CCHHHH-HHHHTTC
T ss_pred             --------------cCCCCCchHHHHHHHHHHHHHHHHHHHH---HhCcEEEEEEeCcEecCchhhcCHHHH-HHHHhhC
Confidence                          6677889999999999999999999997   789999999999999998766432211 1111223


Q ss_pred             HhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017812          293 LLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  329 (365)
Q Consensus       293 ~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~  329 (365)
                      |.+++.+|+|+|+++++++... ...+|+.+..++|..
T Consensus       247 ~~~~~~~~~dvA~~~~~l~~~~~~~~~G~~i~v~gG~~  284 (285)
T 2c07_A          247 PAGRMGTPEEVANLACFLSSDKSGYINGRVFVIDGGLS  284 (285)
T ss_dssp             TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSC
T ss_pred             CCCCCCCHHHHHHHHHHHhCCCcCCCCCCEEEeCCCcc
Confidence            5667889999999999765432 245899998888853

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=100.00  E-value=1.2e-39  Score=291.18  Aligned_cols=229  Identities=17%  Similarity=0.119  Sum_probs=188.7

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEE-e--cCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLV-G--RSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~-~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      ||+++||||++|||+++|++|+++|++|+++ +  |+.++++++.+++  .  +.       |+.|.++++++++++.+ 
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~--~--~~-------~~~~~~~v~~~~~~~~~-   68 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN--P--GT-------IALAEQKPERLVDATLQ-   68 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS--T--TE-------EECCCCCGGGHHHHHGG-
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh--C--CC-------cccCHHHHHHHHHHHHH-
Confidence            5899999999999999999999999999999 6  9998887776665  1  22       23377788888888876 


Q ss_pred             HhccCCCCCeeEEEecCCccc-----CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc
Q 017812          136 LLDSDMHSSIQLLINNAGILA-----TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN  210 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~-----~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~  210 (365)
                           .++++|+||||||+..     +..+.+.+++++++++|+.|+++++++++|+|++++ .|+||++||.++.    
T Consensus        69 -----~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~----  138 (244)
T 1zmo_A           69 -----HGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAG-GASVIFITSSVGK----  138 (244)
T ss_dssp             -----GSSCEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGT----
T ss_pred             -----HcCCCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECChhhC----
Confidence                 6789999999999863     345778999999999999999999999999998875 6999999999988    


Q ss_pred             ccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcc---ccchhHHHHHH
Q 017812          211 AQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIM---REVPSFLSLMA  287 (365)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~---~~~~~~~~~~~  287 (365)
                                      .+.++...|++||+|+++|+++++.|++   +.||+||+|+||+|+|++.   +..........
T Consensus       139 ----------------~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~  199 (244)
T 1zmo_A          139 ----------------KPLAYNPLYGPARAATVALVESAAKTLS---RDGILLYAIGPNFFNNPTYFPTSDWENNPELRE  199 (244)
T ss_dssp             ----------------SCCTTCTTHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEESSBCBTTTBCHHHHHHCHHHHH
T ss_pred             ----------------CCCCCchHHHHHHHHHHHHHHHHHHHHh---hcCcEEEEEeeCCCcCCcccccccccchHHHHH
Confidence                            7778889999999999999999999998   7899999999999999997   44321111111


Q ss_pred             HHH-HHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCc
Q 017812          288 FTV-LKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  328 (365)
Q Consensus       288 ~~~-~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~  328 (365)
                      ... ..|++++.+|+|+|+.+++++... ...+|+++..++|.
T Consensus       200 ~~~~~~p~~r~~~pe~vA~~v~~l~s~~~~~~tG~~i~vdgG~  242 (244)
T 1zmo_A          200 RVDRDVPLGRLGRPDEMGALITFLASRRAAPIVGQFFAFTGGY  242 (244)
T ss_dssp             HHHHHCTTCSCBCHHHHHHHHHHHHTTTTGGGTTCEEEESTTC
T ss_pred             HHhcCCCCCCCcCHHHHHHHHHHHcCccccCccCCEEEeCCCC
Confidence            122 346788999999999999655432 24689999988874

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=100.00  E-value=8.3e-40  Score=292.16  Aligned_cols=227  Identities=20%  Similarity=0.190  Sum_probs=190.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHH-CCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSR-EGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~-~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      ++|++|||||++|||+++|++|++ .|++|++++|+++.            ....+.++++|++|.++++++++.+.   
T Consensus         3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~------------~~~~~~~~~~Dv~~~~~v~~~~~~~~---   67 (244)
T 4e4y_A            3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSF------------SAENLKFIKADLTKQQDITNVLDIIK---   67 (244)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCC------------CCTTEEEEECCTTCHHHHHHHHHHTT---
T ss_pred             CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccc------------ccccceEEecCcCCHHHHHHHHHHHH---
Confidence            589999999999999999999999 78999999998651            13467899999999999999885543   


Q ss_pred             hccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017812          137 LDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  214 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~  214 (365)
                           ++++|+||||||+..  +..+.+.++|++++++|+.|+++++++++|+|+++   |+||++||.++.        
T Consensus        68 -----~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~---g~iv~~sS~~~~--------  131 (244)
T 4e4y_A           68 -----NVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVG---ASIVFNGSDQCF--------  131 (244)
T ss_dssp             -----TCCEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEE---EEEEEECCGGGT--------
T ss_pred             -----hCCCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccC---cEEEEECCHHHc--------
Confidence                 468999999999874  45678999999999999999999999999999763   799999999988        


Q ss_pred             CccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHH----------H
Q 017812          215 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFL----------S  284 (365)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~----------~  284 (365)
                                  .+.++...|++||+|+++|+++|+.|++   +.||+||+|+||+|+|++.+......          .
T Consensus       132 ------------~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  196 (244)
T 4e4y_A          132 ------------IAKPNSFAYTLSKGAIAQMTKSLALDLA---KYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEA  196 (244)
T ss_dssp             ------------CCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHH
T ss_pred             ------------cCCCCCchhHHHHHHHHHHHHHHHHHHH---HcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHH
Confidence                        7888899999999999999999999998   78999999999999999976543221          1


Q ss_pred             HHHHHHHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017812          285 LMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  330 (365)
Q Consensus       285 ~~~~~~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~  330 (365)
                      ........|++++.+|+|+|+.+++++... ...+|+.+..|+|...
T Consensus       197 ~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~~~  243 (244)
T 4e4y_A          197 QKQEEKEFPLNRIAQPQEIAELVIFLLSDKSKFMTGGLIPIDGGYTA  243 (244)
T ss_dssp             HHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHhhcCCCCCCcCHHHHHHHHHHHhcCccccccCCeEeECCCccC
Confidence            111222346678899999999999655432 3568999999998754

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=100.00  E-value=7.3e-39  Score=289.18  Aligned_cols=251  Identities=21%  Similarity=0.218  Sum_probs=202.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.++..+..+++.+.. +.++.++++|++|.++++++++++.+ 
T Consensus        11 ~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~-   88 (265)
T 1h5q_A           11 SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEF-GVKTKAYQCDVSNTDIVTKTIQQIDA-   88 (265)
T ss_dssp             CCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHH-TCCEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhc-CCeeEEEEeeCCCHHHHHHHHHHHHH-
Confidence            4789999999999999999999999999999999998777766666665543 45789999999999999999999987 


Q ss_pred             HhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                           .++++|+||||||+..  +..+.+.+++++++++|+.|++.++++++|.|.+++..++||++||..+....... 
T Consensus        89 -----~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~-  162 (265)
T 1h5q_A           89 -----DLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSS-  162 (265)
T ss_dssp             -----HSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEE-
T ss_pred             -----hcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhcccccc-
Confidence                 5688999999999864  34567899999999999999999999999999875434899999998876211000 


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  293 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  293 (365)
                                  ..+..+...|++||++++.++++++.|+.   +.||++++|+||+|.|++.+....... .......|
T Consensus       163 ------------~~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~-~~~~~~~~  226 (265)
T 1h5q_A          163 ------------LNGSLTQVFYNSSKAACSNLVKGLAAEWA---SAGIRVNALSPGYVNTDQTAHMDKKIR-DHQASNIP  226 (265)
T ss_dssp             ------------TTEECSCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCCGGGGGSCHHHH-HHHHHTCT
T ss_pred             ------------ccccccccccHHHHHHHHHHHHHHHHHHH---hcCcEEEEEecCccccccccccchhHH-HHHHhcCc
Confidence                        01223367899999999999999999997   789999999999999999876532211 11122245


Q ss_pred             hcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017812          294 LGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  330 (365)
Q Consensus       294 ~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~  330 (365)
                      ++++.+|+|+|+.+++++... ...+|+.+..++|..+
T Consensus       227 ~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~~  264 (265)
T 1h5q_A          227 LNRFAQPEEMTGQAILLLSDHATYMTGGEYFIDGGQLI  264 (265)
T ss_dssp             TSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEECTTGGG
T ss_pred             ccCCCCHHHHHHHHHhhccCchhcCcCcEEEecCCEeC
Confidence            678889999999999665432 3568999999998754

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=100.00  E-value=5.5e-39  Score=287.75  Aligned_cols=245  Identities=25%  Similarity=0.333  Sum_probs=202.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++...   .++.++.+|++|+++++++++++.+ 
T Consensus         3 ~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~-   78 (251)
T 1zk4_A            3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTP---DQIQFFQHDSSDEDGWTKLFDATEK-   78 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT---TTEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcc---CceEEEECCCCCHHHHHHHHHHHHH-
Confidence            478999999999999999999999999999999999998888777776432   4789999999999999999999988 


Q ss_pred             HhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                           .++++|+||||||+..  +..+.+.+++++++++|+.|++.+++.++|.|++++..++||++||..+.       
T Consensus        79 -----~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~-------  146 (251)
T 1zk4_A           79 -----AFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGF-------  146 (251)
T ss_dssp             -----HHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGT-------
T ss_pred             -----HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhc-------
Confidence                 4578999999999863  34567899999999999999999999999999887622899999999987       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  293 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  293 (365)
                                   .+.++...|++||++++.++++++.|+.. ...||++++|+||++.|++.+..+............|
T Consensus       147 -------------~~~~~~~~Y~~sK~a~~~~~~~~a~e~~~-~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~  212 (251)
T 1zk4_A          147 -------------VGDPSLGAYNASKGAVRIMSKSAALDCAL-KDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTP  212 (251)
T ss_dssp             -------------SCCTTCHHHHHHHHHHHHHHHHHHHHHHH-TTCSEEEEEEEECCBCCHHHHTSTTHHHHHTSTTTCT
T ss_pred             -------------cCCCCCccchHHHHHHHHHHHHHHHHhcc-cCCCeEEEEEeeCcCcchhhhhcCchhhhHHHhhcCC
Confidence                         67788899999999999999999998741 1469999999999999998776532211111111235


Q ss_pred             hcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017812          294 LGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  330 (365)
Q Consensus       294 ~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~  330 (365)
                      ++++.+|+|+|+.+++++... ...+|+.+..++|...
T Consensus       213 ~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~~  250 (251)
T 1zk4_A          213 MGHIGEPNDIAYICVYLASNESKFATGSEFVVDGGYTA  250 (251)
T ss_dssp             TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCCCcCHHHHHHHHHHHcCcccccccCcEEEECCCccC
Confidence            667889999999999765432 2468999998988643

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=100.00  E-value=5e-39  Score=283.21  Aligned_cols=214  Identities=21%  Similarity=0.202  Sum_probs=184.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+                      +|++|+++++++++++   
T Consensus         3 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~----------------------~D~~~~~~v~~~~~~~---   57 (223)
T 3uce_A            3 GSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG----------------------LDISDEKSVYHYFETI---   57 (223)
T ss_dssp             --CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT----------------------CCTTCHHHHHHHHHHH---
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc----------------------cCCCCHHHHHHHHHHh---
Confidence            467999999999999999999999999999999999864                      8999999999888743   


Q ss_pred             HhccCCCCCeeEEEecCCcc---cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017812          136 LLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~---~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~  212 (365)
                             +++|+||||||+.   .+..+.+.+++++++++|+.|+++++++++|+|++   .|+||++||.++.      
T Consensus        58 -------g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~---~g~iv~~sS~~~~------  121 (223)
T 3uce_A           58 -------GAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQ---GGSITLTSGMLSR------  121 (223)
T ss_dssp             -------CSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEE---EEEEEEECCGGGT------
T ss_pred             -------CCCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccC---CeEEEEecchhhc------
Confidence                   6799999999986   34567899999999999999999999999999976   4899999999988      


Q ss_pred             CCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHH---HHHH
Q 017812          213 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSL---MAFT  289 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~---~~~~  289 (365)
                                    .+.++...|++||+|+++|+++++.|+.   +  |+||+|+||+|+|++.+........   ....
T Consensus       122 --------------~~~~~~~~Y~asK~a~~~~~~~la~e~~---~--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~  182 (223)
T 3uce_A          122 --------------KVVANTYVKAAINAAIEATTKVLAKELA---P--IRVNAISPGLTKTEAYKGMNADDRDAMYQRTQ  182 (223)
T ss_dssp             --------------SCCTTCHHHHHHHHHHHHHHHHHHHHHT---T--SEEEEEEECSBCSGGGTTSCHHHHHHHHHHHH
T ss_pred             --------------cCCCCchHHHHHHHHHHHHHHHHHHhhc---C--cEEEEEEeCCCcchhhhhcchhhHHHHHHHHh
Confidence                          7888899999999999999999999996   4  9999999999999998776443221   1223


Q ss_pred             HHHHhcCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017812          290 VLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  330 (365)
Q Consensus       290 ~~~~~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~  330 (365)
                      ...|++++.+|+|+|+++++++. +...+|+.+..|+|..+
T Consensus       183 ~~~~~~~~~~~~dvA~~~~~l~~-~~~~tG~~i~vdgG~~~  222 (223)
T 3uce_A          183 SHLPVGKVGEASDIAMAYLFAIQ-NSYMTGTVIDVDGGALL  222 (223)
T ss_dssp             HHSTTCSCBCHHHHHHHHHHHHH-CTTCCSCEEEESTTGGG
T ss_pred             hcCCCCCccCHHHHHHHHHHHcc-CCCCCCcEEEecCCeec
Confidence            34577889999999999997664 56779999999998764

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=100.00  E-value=9.3e-39  Score=286.84  Aligned_cols=244  Identities=19%  Similarity=0.228  Sum_probs=204.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      ++++|+++||||+||||+++|++|+++|++|++++|+.++++++.+++...  +.++.++.+|++|+++++++++++.+ 
T Consensus         8 ~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~-   84 (255)
T 1fmc_A            8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL--GGQAFACRCDITSEQELSALADFAIS-   84 (255)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHh--CCceEEEEcCCCCHHHHHHHHHHHHH-
Confidence            478999999999999999999999999999999999999888888888665  45788999999999999999999887 


Q ss_pred             HhccCCCCCeeEEEecCCcccCC-CCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017812          136 LLDSDMHSSIQLLINNAGILATS-SRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  214 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~~~-~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~  214 (365)
                           .++++|+||||||+..+. .+.+.+++++.+++|+.|+++++++++|.|++++ .++||++||.++.        
T Consensus        85 -----~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~--------  150 (255)
T 1fmc_A           85 -----KLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAE--------  150 (255)
T ss_dssp             -----HHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT--------
T ss_pred             -----hcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhc--------
Confidence                 457899999999986432 2678899999999999999999999999998765 6899999999887        


Q ss_pred             CccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHh
Q 017812          215 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLL  294 (365)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  294 (365)
                                  .+.++...|++||++++.++++++.|+.   .+||++++++||++.|++.+...............|+
T Consensus       151 ------------~~~~~~~~Y~~sK~a~~~~~~~~~~~~~---~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~  215 (255)
T 1fmc_A          151 ------------NKNINMTSYASSKAAASHLVRNMAFDLG---EKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPI  215 (255)
T ss_dssp             ------------CCCTTCHHHHHHHHHHHHHHHHHHHHHH---TTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSS
T ss_pred             ------------CCCCCCcccHHHHHHHHHHHHHHHHHhh---hcCcEEEEEecccCcchhhhhccChHHHHHHHhcCCc
Confidence                        6677888999999999999999999997   7899999999999999987543111111111222356


Q ss_pred             cCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcccc
Q 017812          295 GLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVN  331 (365)
Q Consensus       295 ~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~~  331 (365)
                      +++.+|+|+|+.+++++... ...+|+.|..++|+...
T Consensus       216 ~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~s  253 (255)
T 1fmc_A          216 RRLGQPQDIANAALFLCSPAASWVSGQILTVSGGGVQE  253 (255)
T ss_dssp             CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSCCC
T ss_pred             ccCCCHHHHHHHHHHHhCCccccCCCcEEEECCceecc
Confidence            77889999999999655332 24579999989887653

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=100.00  E-value=2.1e-38  Score=288.20  Aligned_cols=244  Identities=21%  Similarity=0.277  Sum_probs=202.2

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.+..+++.+++..   ..++.++.+|++|+++++++++++.+
T Consensus        12 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~   88 (278)
T 2bgk_A           12 NRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS---PDVISFVHCDVTKDEDVRNLVDTTIA   88 (278)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC---TTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCC---CCceEEEECCCCCHHHHHHHHHHHHH
Confidence            457899999999999999999999999999999999998887777666632   23789999999999999999999988


Q ss_pred             HHhccCCCCCeeEEEecCCccc----CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc
Q 017812          135 WLLDSDMHSSIQLLINNAGILA----TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN  210 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~----~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~  210 (365)
                            .++++|+||||||+..    +..+.+.+++++.+++|+.|++.++++++|.|.+++ .|+||++||..++    
T Consensus        89 ------~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~----  157 (278)
T 2bgk_A           89 ------KHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAK-KGSIVFTASISSF----  157 (278)
T ss_dssp             ------HHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGT-CEEEEEECCGGGT----
T ss_pred             ------HcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CCeEEEEeecccc----
Confidence                  4578999999999863    345678899999999999999999999999998765 6899999999987    


Q ss_pred             ccCCCccccccccccCCCCC-hhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh-HHHHH-H
Q 017812          211 AQVNNETITGKFFLRSKCYP-CARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS-FLSLM-A  287 (365)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~-~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~-~~~~~-~  287 (365)
                                      .+.+ +...|++||++++.++++++.|++   +.||++++|+||++.|++.+.... ..... .
T Consensus       158 ----------------~~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~  218 (278)
T 2bgk_A          158 ----------------TAGEGVSHVYTATKHAVLGLTTSLCTELG---EYGIRVNCVSPYIVASPLLTDVFGVDSSRVEE  218 (278)
T ss_dssp             ----------------CCCTTSCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEESCCSCCCCTTSSSCCHHHHHH
T ss_pred             ----------------CCCCCCCcchHHHHHHHHHHHHHHHHHHh---hcCcEEEEEEeceecchhhhhhcccchhHHHH
Confidence                            5555 678999999999999999999997   789999999999999999765421 11111 1


Q ss_pred             HHHH--HHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcccc
Q 017812          288 FTVL--KLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVN  331 (365)
Q Consensus       288 ~~~~--~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~~  331 (365)
                      ....  .+.+++.+|+|+|+++++++... ...+|+.|..++|....
T Consensus       219 ~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~  265 (278)
T 2bgk_A          219 LAHQAANLKGTLLRAEDVADAVAYLAGDESKYVSGLNLVIDGGYTRT  265 (278)
T ss_dssp             HHHHTCSSCSCCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             hhhcccccccccCCHHHHHHHHHHHcCcccccCCCCEEEECCccccc
Confidence            1111  13456889999999999765432 35689999999998764

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=100.00  E-value=1.3e-40  Score=310.17  Aligned_cols=241  Identities=15%  Similarity=0.146  Sum_probs=193.3

Q ss_pred             CCCEEEEecCCC--hHHHHHHHHHHHCCCEEEEEecCc---------hhHHHHHHHHHhhc-CCCceEEEEecCCCh--h
Q 017812           58 KRPVCIVTGATS--GLGAAAAYALSREGFHVVLVGRSS---------HLLSETMADITSRN-KDARLEAFQVDLSSF--Q  123 (365)
Q Consensus        58 ~~k~vlITGass--GIG~~~a~~la~~G~~Vil~~r~~---------~~~~~~~~~l~~~~-~~~~~~~~~~Dls~~--~  123 (365)
                      ++|++|||||++  |||+++|++|+++|++|++++|++         ++++...+.+.... ....+.++++|+++.  +
T Consensus         1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~   80 (329)
T 3lt0_A            1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchh
Confidence            378999999985  999999999999999999887765         22222222211111 123478899999988  8


Q ss_pred             ------------------hHHHHHHHHHHHHhccCCCCCeeEEEecCCcc----cCCCCCCHHHHhHhHHHHhHHHHHHH
Q 017812          124 ------------------SVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL----ATSSRLTPEGYDQMMSTNYIGAFFLT  181 (365)
Q Consensus       124 ------------------~v~~~~~~~~~~~~~~~~~~~id~lv~nAG~~----~~~~~~~~~~~~~~~~vN~~~~~~l~  181 (365)
                                        +++++++++.+      .+++||+||||||+.    .+..+.+.++|++++++|+.|+++++
T Consensus        81 ~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~------~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~  154 (329)
T 3lt0_A           81 DIDEETKNNKRYNMLQNYTIEDVANLIHQ------KYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLC  154 (329)
T ss_dssp             GCCHHHHTSHHHHTCCSCSHHHHHHHHHH------HHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred             hhhhhhcccccccccCHHHHHHHHHHHHH------hcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHH
Confidence                              99999999988      458899999999974    34567899999999999999999999


Q ss_pred             HHHhHhhhcCCCCCeEEEEcCCcccccccccCCCccccccccccCCCCChhh-hhhhhHHHHHHHHHHHHHHhCCCCC-C
Q 017812          182 KLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCAR-IYEYSKLCLLIFSYELHRNLGLDKS-R  259 (365)
Q Consensus       182 ~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Y~~sK~a~~~~~~~la~e~~~~~~-~  259 (365)
                      ++++|+|+++   |+||++||.++.                    .+.++.. +|++||+|+.+|+++|+.|++   + .
T Consensus       155 ~~~~p~m~~~---g~Iv~isS~~~~--------------------~~~~~~~~~Y~asKaal~~~~~~la~el~---~~~  208 (329)
T 3lt0_A          155 KYFVNIMKPQ---SSIISLTYHASQ--------------------KVVPGYGGGMSSAKAALESDTRVLAYHLG---RNY  208 (329)
T ss_dssp             HHHGGGEEEE---EEEEEEECGGGT--------------------SCCTTCTTTHHHHHHHHHHHHHHHHHHHH---HHH
T ss_pred             HHHHHHHhhC---CeEEEEeCcccc--------------------CCCCcchHHHHHHHHHHHHHHHHHHHHhC---Ccc
Confidence            9999999874   899999999988                    7778885 999999999999999999997   6 7


Q ss_pred             CeEEEEecCCcccCCccccchhHH--------------------------------------------HHHHHHHHHHhc
Q 017812          260 HVSVIAADPGVVKTNIMREVPSFL--------------------------------------------SLMAFTVLKLLG  295 (365)
Q Consensus       260 gi~v~~v~PG~v~T~~~~~~~~~~--------------------------------------------~~~~~~~~~~~~  295 (365)
                      ||+||+|+||+|+|+|.+......                                            .........|++
T Consensus       209 gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~  288 (329)
T 3lt0_A          209 NIRINTISAGPLKSRAATAINKLNNTYENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLR  288 (329)
T ss_dssp             CCEEEEEEECCCCCHHHHTCC------------------------------------------CHHHHHHHHHHHHSSSC
T ss_pred             CeEEEEEecceeechhHhhhhhhcccccccccccccccccccchhhcccccchhhhhhhhcccchhHHHHHHHhhcCccc
Confidence            999999999999999987642100                                            011223345778


Q ss_pred             CCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCccc
Q 017812          296 LLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTV  330 (365)
Q Consensus       296 ~~~~p~e~A~~i~~~~l~-~~~~~G~~~~~~~g~~~  330 (365)
                      |+.+|+|+|+.+++++.. +...+|+.+.+|+|..+
T Consensus       289 r~~~peevA~~v~fL~s~~a~~itG~~i~vdGG~~~  324 (329)
T 3lt0_A          289 QKLLSTDIGSVASFLLSRESRAITGQTIYVDNGLNI  324 (329)
T ss_dssp             SCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CcCCHHHHHHHHHHHhCchhccccCcEEEEcCCeeE
Confidence            999999999999954432 12568999999999876

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=100.00  E-value=2.2e-39  Score=295.40  Aligned_cols=231  Identities=22%  Similarity=0.271  Sum_probs=189.9

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      +++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++     +.++.++++|++|.++++++++++.+  
T Consensus         3 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~~~~~~~~~~~--   75 (281)
T 3m1a_A            3 ESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAY-----PDRAEAISLDVTDGERIDVVAADVLA--   75 (281)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHC-----TTTEEEEECCTTCHHHHHHHHHHHHH--
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----cCCceEEEeeCCCHHHHHHHHHHHHH--
Confidence            46899999999999999999999999999999999998887766553     45789999999999999999999988  


Q ss_pred             hccCCCCCeeEEEecCCcc--cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017812          137 LDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  214 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~  214 (365)
                          .++++|+||||||+.  .+..+.+.+++++++++|+.|++++++.++|.|++++ .|+||++||.++.        
T Consensus        76 ----~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~--------  142 (281)
T 3m1a_A           76 ----RYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERG-SGSVVNISSFGGQ--------  142 (281)
T ss_dssp             ----HHSCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT--------
T ss_pred             ----hCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEEcCcccc--------
Confidence                457899999999986  3455789999999999999999999999999998876 6899999999988        


Q ss_pred             CccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc--------hhHHHH-
Q 017812          215 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV--------PSFLSL-  285 (365)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~--------~~~~~~-  285 (365)
                                  .+.++...|++||++++.++++++.|++   +.||+|++|+||+|.|++....        +..... 
T Consensus       143 ------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~  207 (281)
T 3m1a_A          143 ------------LSFAGFSAYSATKAALEQLSEGLADEVA---PFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKV  207 (281)
T ss_dssp             ------------CCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHH
T ss_pred             ------------CCCCCchHHHHHHHHHHHHHHHHHHHhh---ccCcEEEEEecCccccccccccccccCCcchhhHHHh
Confidence                        7788899999999999999999999998   7899999999999999986431        111111 


Q ss_pred             ---HHHHHHHHhcCCCCHHHHHHHHHHHhcCCCCCcccEEe
Q 017812          286 ---MAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFF  323 (365)
Q Consensus       286 ---~~~~~~~~~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~  323 (365)
                         .......+.+++.+|+|+|+++++++.. +...+.|+.
T Consensus       208 ~~~~~~~~~~~~~~~~~~~dva~a~~~~~~~-~~~~~~~~l  247 (281)
T 3m1a_A          208 GPTRQLVQGSDGSQPGDPAKAAAAIRLALDT-EKTPLRLAL  247 (281)
T ss_dssp             HHHHHHHHC-----CBCHHHHHHHHHHHHHS-SSCCSEEEE
T ss_pred             HHHHHHHhhccCCCCCCHHHHHHHHHHHHhC-CCCCeEEec
Confidence               1112223556788999999999965543 333444444

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.4e-38  Score=287.93  Aligned_cols=244  Identities=19%  Similarity=0.194  Sum_probs=199.1

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      +++|+++||||++|||+++|++|+++|++|++++|+.++++++.+++.+...+.++.++++|++|+++++++++++.+  
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~--   82 (267)
T 2gdz_A            5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVD--   82 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHH--
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHH--
Confidence            678999999999999999999999999999999999988888888876544345789999999999999999999988  


Q ss_pred             hccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCC--CCCeEEEEcCCcccccccccCC
Q 017812          137 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP--VPSRIVNVTSFTHRNVFNAQVN  214 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~--~~g~iV~vsS~~~~~~~~~~~~  214 (365)
                          .++++|+||||||+..      .+++++.+++|+.|++.+++.++|.|++++  ..|+||++||.++.        
T Consensus        83 ----~~g~id~lv~~Ag~~~------~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~--------  144 (267)
T 2gdz_A           83 ----HFGRLDILVNNAGVNN------EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGL--------  144 (267)
T ss_dssp             ----HHSCCCEEEECCCCCC------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGT--------
T ss_pred             ----HcCCCCEEEECCCCCC------hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCcccc--------
Confidence                4578999999999752      467899999999999999999999997652  25899999999988        


Q ss_pred             CccccccccccCCCCChhhhhhhhHHHHHHHHHHH--HHHhCCCCCCCeEEEEecCCcccCCccccchhHHHH-------
Q 017812          215 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYEL--HRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSL-------  285 (365)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l--a~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~-------  285 (365)
                                  .+.++...|++||++++.+++++  +.|++   +.||+||+|+||+++|++..........       
T Consensus       145 ------------~~~~~~~~Y~~sK~a~~~~~~~~ala~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~  209 (267)
T 2gdz_A          145 ------------MPVAQQPVYCASKHGIVGFTRSAALAANLM---NSGVRLNAICPGFVNTAILESIEKEENMGQYIEYK  209 (267)
T ss_dssp             ------------SCCTTCHHHHHHHHHHHHHHHHHHHHHHHH---TCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGH
T ss_pred             ------------CCCCCCchHHHHHHHHHHHHHHHHHHHHhc---cCCcEEEEEecCcCcchhhhccccccccchhhhHH
Confidence                        67778889999999999999995  68887   7899999999999999986543211000       


Q ss_pred             HHHHHHHHhcCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccccCCccc
Q 017812          286 MAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALS  336 (365)
Q Consensus       286 ~~~~~~~~~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~~~~~~~  336 (365)
                      .......+..++.+|+|+|+.+++++.. +..+|+.+..++|+.....+..
T Consensus       210 ~~~~~~~~~~~~~~~~dvA~~v~~l~s~-~~~~G~~~~v~gg~~~~~~~~~  259 (267)
T 2gdz_A          210 DHIKDMIKYYGILDPPLIANGLITLIED-DALNGAIMKITTSKGIHFQDYG  259 (267)
T ss_dssp             HHHHHHHHHHCCBCHHHHHHHHHHHHHC-TTCSSCEEEEETTTEEEECCCC
T ss_pred             HHHHHHhccccCCCHHHHHHHHHHHhcC-cCCCCcEEEecCCCcccccCcC
Confidence            0011112233567999999999965543 3578999988888876554443

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=100.00  E-value=8.9e-39  Score=285.19  Aligned_cols=238  Identities=24%  Similarity=0.316  Sum_probs=200.6

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEE-EecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVL-VGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil-~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      ||+++||||++|||+++|++|+++|++|++ .+|+.++++++.+++...  +.++.++++|++|+++++++++++.+   
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~---   75 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAY--GGQAITFGGDVSKEADVEAMMKTAID---   75 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH--TCEEEEEECCTTSHHHHHHHHHHHHH---
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCcEEEEeCCCCCHHHHHHHHHHHHH---
Confidence            589999999999999999999999999999 489988888888887665  45788999999999999999999988   


Q ss_pred             ccCCCCCeeEEEecCCcccC--CCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCC
Q 017812          138 DSDMHSSIQLLINNAGILAT--SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNN  215 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~--~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~  215 (365)
                         .++++|+||||||+...  ..+.+.+++++++++|+.|++++++.++|.|.+++ .++||++||.++.         
T Consensus        76 ---~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~---------  142 (244)
T 1edo_A           76 ---AWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKR-KGRIINIASVVGL---------  142 (244)
T ss_dssp             ---HSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHH---------
T ss_pred             ---HcCCCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-CCEEEEECChhhc---------
Confidence               56889999999998643  34678999999999999999999999999998765 6899999999887         


Q ss_pred             ccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhc
Q 017812          216 ETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLG  295 (365)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  295 (365)
                                 .+.++...|++||++++.++++++.|+.   +.||++++++||++.|++.+....... .......|++
T Consensus       143 -----------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~-~~~~~~~~~~  207 (244)
T 1edo_A          143 -----------IGNIGQANYAAAKAGVIGFSKTAAREGA---SRNINVNVVCPGFIASDMTAKLGEDME-KKILGTIPLG  207 (244)
T ss_dssp             -----------HCCTTCHHHHHHHHHHHHHHHHHHHHHH---TTTEEEEEEEECSBCSHHHHTTCHHHH-HHHHTSCTTC
T ss_pred             -----------CCCCCCccchhhHHHHHHHHHHHHHHhh---hcCCEEEEEeeCccccchhhhcChHHH-HHHhhcCCCC
Confidence                       5667789999999999999999999997   789999999999999998765432211 1111123566


Q ss_pred             CCCCHHHHHHHHHHHhcCCC--CCcccEEeCCCCcc
Q 017812          296 LLQSPEKGINSVLDAALAPP--ETSGVYFFGGKGRT  329 (365)
Q Consensus       296 ~~~~p~e~A~~i~~~~l~~~--~~~G~~~~~~~g~~  329 (365)
                      ++.+|+|+|+.+++++..+.  ..+|+.+..++|..
T Consensus       208 ~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gG~~  243 (244)
T 1edo_A          208 RTGQPENVAGLVEFLALSPAASYITGQAFTIDGGIA  243 (244)
T ss_dssp             SCBCHHHHHHHHHHHHHCSGGGGCCSCEEEESTTTT
T ss_pred             CCCCHHHHHHHHHHHhCCCccCCcCCCEEEeCCCcc
Confidence            78899999999997654432  45799998888753

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=100.00  E-value=3.4e-38  Score=283.08  Aligned_cols=239  Identities=20%  Similarity=0.256  Sum_probs=198.3

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCce-EEEEecCCChhhHHHHHHHHH
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARL-EAFQVDLSSFQSVLKFKDSLQ  133 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~-~~~~~Dls~~~~v~~~~~~~~  133 (365)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.++++++.+++     +.++ .++.+|++|.++++++++++.
T Consensus         7 ~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~~   81 (254)
T 2wsb_A            7 FRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQEL-----GAAVAARIVADVTDAEAMTAAAAEAE   81 (254)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----GGGEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----cccceeEEEEecCCHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999998888777776     2356 889999999999999999887


Q ss_pred             HHHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017812          134 QWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  211 (365)
Q Consensus       134 ~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~  211 (365)
                      + +      +++|+||||||+..  +..+.+.+++++++++|+.|++.+++.++|.|++++ .++||++||..+.     
T Consensus        82 ~-~------~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~-----  148 (254)
T 2wsb_A           82 A-V------APVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARG-AGAIVNLGSMSGT-----  148 (254)
T ss_dssp             H-H------SCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT-----
T ss_pred             h-h------CCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEecchhc-----
Confidence            6 3      67999999999864  345678999999999999999999999999998765 6899999999887     


Q ss_pred             cCCCccccccccccCCCCChh--hhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHH-HHHH
Q 017812          212 QVNNETITGKFFLRSKCYPCA--RIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLS-LMAF  288 (365)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~--~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~-~~~~  288 (365)
                                     .+.+..  ..|++||++++.++++++.|+.   +.||++++|+||++.|++.+....... ....
T Consensus       149 ---------------~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~  210 (254)
T 2wsb_A          149 ---------------IVNRPQFASSYMASKGAVHQLTRALAAEWA---GRGVRVNALAPGYVATEMTLKMRERPELFETW  210 (254)
T ss_dssp             ---------------SCCSSSCBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECCBCSHHHHHHHTCHHHHHHH
T ss_pred             ---------------cCCCCCcchHHHHHHHHHHHHHHHHHHHHh---hcCeEEEEEEecccCchhhhccccChHHHHHH
Confidence                           444455  8999999999999999999997   789999999999999998764321111 1111


Q ss_pred             HHHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017812          289 TVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  329 (365)
Q Consensus       289 ~~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~  329 (365)
                      ....|.+++.+|+|+|+.+++++... ...+|+.+..++|..
T Consensus       211 ~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~  252 (254)
T 2wsb_A          211 LDMTPMGRCGEPSEIAAAALFLASPAASYVTGAILAVDGGYT  252 (254)
T ss_dssp             HHTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HhcCCCCCCCCHHHHHHHHHHHhCcccccccCCEEEECCCEe
Confidence            22235677889999999999765432 356899999888753

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=100.00  E-value=2.7e-38  Score=287.84  Aligned_cols=241  Identities=18%  Similarity=0.191  Sum_probs=202.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.++.+++.+++...  +.++.++++|++|.++++++++++.+ 
T Consensus        31 ~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~-  107 (279)
T 3ctm_A           31 SLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTY--GVHSKAYKCNISDPKSVEETISQQEK-  107 (279)
T ss_dssp             CCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHH--CSCEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcceEEEeecCCHHHHHHHHHHHHH-
Confidence            588999999999999999999999999999999999998887777776554  45789999999999999999999887 


Q ss_pred             HhccCCCCCeeEEEecCCcccC---CC-CCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017812          136 LLDSDMHSSIQLLINNAGILAT---SS-RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  211 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~~---~~-~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~  211 (365)
                           .++++|+||||||+...   .. +.+.+++++++++|+.|++.+++.++|.|++++ .++||++||.++.     
T Consensus       108 -----~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~~iv~isS~~~~-----  176 (279)
T 3ctm_A          108 -----DFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNG-KGSLIITSSISGK-----  176 (279)
T ss_dssp             -----HHSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCCTTS-----
T ss_pred             -----HhCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEECchHhc-----
Confidence                 45789999999998633   33 667899999999999999999999999998765 6899999999887     


Q ss_pred             cCCCccccccccccCCC--CChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHH
Q 017812          212 QVNNETITGKFFLRSKC--YPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFT  289 (365)
Q Consensus       212 ~~~~~~~~~~~~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~  289 (365)
                                     .+  .++...|++||++++.++++++.|+.   +.+ +|++|+||+++|++....+.... ....
T Consensus       177 ---------------~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~~-~v~~v~Pg~v~t~~~~~~~~~~~-~~~~  236 (279)
T 3ctm_A          177 ---------------IVNIPQLQAPYNTAKAACTHLAKSLAIEWA---PFA-RVNTISPGYIDTDITDFASKDMK-AKWW  236 (279)
T ss_dssp             ---------------CC---CCHHHHHHHHHHHHHHHHHHHHHTT---TTC-EEEEEEECSBSSTTTSSCCHHHH-HHHH
T ss_pred             ---------------cCCCCCCcccHHHHHHHHHHHHHHHHHHhc---ccC-CEEEEeccCCccccccccChHHH-HHHH
Confidence                           45  67788999999999999999999998   778 99999999999999864332211 1122


Q ss_pred             HHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017812          290 VLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  330 (365)
Q Consensus       290 ~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~  330 (365)
                      ...|++++.+|+|+|+.+++++... ...+|+.+..++|..+
T Consensus       237 ~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~i~vdgG~~~  278 (279)
T 3ctm_A          237 QLTPLGREGLTQELVGGYLYLASNASTFTTGSDVVIDGGYTC  278 (279)
T ss_dssp             HHSTTCSCBCGGGTHHHHHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred             HhCCccCCcCHHHHHHHHHHHhCccccCccCCEEEECCCeec
Confidence            3346778899999999999655432 3568999999988653

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=100.00  E-value=7.8e-39  Score=286.08  Aligned_cols=239  Identities=23%  Similarity=0.307  Sum_probs=185.2

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEE-ecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLV-GRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      +++|+++||||++|||+++|++|+++|++|+++ .|+++.++++.+++...  +.++.++++|++|+++++++++++.+ 
T Consensus         3 l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~-   79 (247)
T 2hq1_A            3 LKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAA--GINVVVAKGDVKNPEDVENMVKTAMD-   79 (247)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHT--TCCEEEEESCTTSHHHHHHHHHHHHH-
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHH-
Confidence            678999999999999999999999999999999 67888888887777654  45789999999999999999999988 


Q ss_pred             HhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                           .++++|+||||||+..  +..+.+.+++++.+++|+.|+++++++++|.|++++ .++||++||.++.       
T Consensus        80 -----~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~-------  146 (247)
T 2hq1_A           80 -----AFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQK-SGKIINITSIAGI-------  146 (247)
T ss_dssp             -----HHSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHT-CEEEEEECC-----------
T ss_pred             -----hcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhc-------
Confidence                 4578999999999864  334667889999999999999999999999998765 6899999999877       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  293 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  293 (365)
                                   .+.++...|++||++++.+++++++|+.   ..||++++++||++.|++....+..... ......|
T Consensus       147 -------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~~-~~~~~~~  209 (247)
T 2hq1_A          147 -------------IGNAGQANYAASKAGLIGFTKSIAKEFA---AKGIYCNAVAPGIIKTDMTDVLPDKVKE-MYLNNIP  209 (247)
T ss_dssp             ------------------CHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCCHHHHTSCHHHHH-HHHTTST
T ss_pred             -------------cCCCCCcHhHHHHHHHHHHHHHHHHHHH---HcCcEEEEEEEEEEeccchhhcchHHHH-HHHhhCC
Confidence                         6667889999999999999999999998   7899999999999999987655432111 1111235


Q ss_pred             hcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCc
Q 017812          294 LGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  328 (365)
Q Consensus       294 ~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~  328 (365)
                      .+++.+|+|+|+.+++++... ...+|+.|..++|.
T Consensus       210 ~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~  245 (247)
T 2hq1_A          210 LKRFGTPEEVANVVGFLASDDSNYITGQVINIDGGL  245 (247)
T ss_dssp             TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CCCCCCHHHHHHHHHHHcCcccccccCcEEEeCCCc
Confidence            567889999999999655432 34579999888875

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=100.00  E-value=2e-38  Score=283.46  Aligned_cols=241  Identities=25%  Similarity=0.333  Sum_probs=202.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.++++++.+++.+.. +.++.++.+|++|+++++++++++.+ 
T Consensus         4 ~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~-   81 (248)
T 2pnf_A            4 KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKY-GVKAHGVEMNLLSEESINKAFEEIYN-   81 (248)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH-CCCEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhc-CCceEEEEccCCCHHHHHHHHHHHHH-
Confidence            4679999999999999999999999999999999999998888887776532 35789999999999999999999988 


Q ss_pred             HhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                           .++++|+||||||+..  +..+.+.+++++.+++|+.|++++++.++|.|.+++ .++||++||..+.       
T Consensus        82 -----~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~-------  148 (248)
T 2pnf_A           82 -----LVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQR-WGRIVNISSVVGF-------  148 (248)
T ss_dssp             -----HSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHT-CEEEEEECCHHHH-------
T ss_pred             -----hcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEccHHhc-------
Confidence                 5688999999999864  335678999999999999999999999999998765 6899999998876       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  293 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  293 (365)
                                   .+.++...|++||++++.++++++.|+.   ..||++++++||++.|++....+.... .......|
T Consensus       149 -------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~~i~v~~v~Pg~v~t~~~~~~~~~~~-~~~~~~~~  211 (248)
T 2pnf_A          149 -------------TGNVGQVNYSTTKAGLIGFTKSLAKELA---PRNVLVNAVAPGFIETDMTAVLSEEIK-QKYKEQIP  211 (248)
T ss_dssp             -------------HCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCCGGGGGSCHHHH-HHHHHTCT
T ss_pred             -------------CCCCCCchHHHHHHHHHHHHHHHHHHhc---ccCeEEEEEEeceecCchhhhccHHHH-HHHHhcCC
Confidence                         5667788999999999999999999997   789999999999999999765433211 11112235


Q ss_pred             hcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCc
Q 017812          294 LGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  328 (365)
Q Consensus       294 ~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~  328 (365)
                      .+++.+|+|+|+.+++++... ...+|+.|..++|.
T Consensus       212 ~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~  247 (248)
T 2pnf_A          212 LGRFGSPEEVANVVLFLCSELASYITGEVIHVNGGM  247 (248)
T ss_dssp             TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CCCccCHHHHHHHHHHHhCchhhcCCCcEEEeCCCc
Confidence            567889999999999766432 35679998888774

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=100.00  E-value=9.5e-39  Score=287.01  Aligned_cols=231  Identities=19%  Similarity=0.188  Sum_probs=190.9

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhcc
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  139 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~  139 (365)
                      |++|||||++|||+++|++|+++|++|++++|+.++++++.+ +...  +.++..+     |.++++++++++.+     
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~--~~~~~~~-----d~~~v~~~~~~~~~-----   68 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAET--YPQLKPM-----SEQEPAELIEAVTS-----   68 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHH--CTTSEEC-----CCCSHHHHHHHHHH-----
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhc--CCcEEEE-----CHHHHHHHHHHHHH-----
Confidence            689999999999999999999999999999999988877665 6554  2344443     67788888988887     


Q ss_pred             CCCCCeeEEEecCCcc-c--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017812          140 DMHSSIQLLINNAGIL-A--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  216 (365)
Q Consensus       140 ~~~~~id~lv~nAG~~-~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~  216 (365)
                       .++++|+||||||+. .  +..+.+.+++++++++|+.|+++++++++|+|++++ .|+||++||.++.          
T Consensus        69 -~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~----------  136 (254)
T 1zmt_A           69 -AYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRK-SGHIIFITSATPF----------  136 (254)
T ss_dssp             -HHSCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCSTTT----------
T ss_pred             -HhCCCCEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECCcccc----------
Confidence             457899999999986 2  345778999999999999999999999999998765 6899999999988          


Q ss_pred             cccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcc---------cCCccccchhHHHHHH
Q 017812          217 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVV---------KTNIMREVPSFLSLMA  287 (365)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v---------~T~~~~~~~~~~~~~~  287 (365)
                                .+.++...|++||+|+++|+++++.|++   +.||+||+|+||+|         +|++.+..+...  ..
T Consensus       137 ----------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~~~~~--~~  201 (254)
T 1zmt_A          137 ----------GPWKELSTYTSARAGACTLANALSKELG---EYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHV--AH  201 (254)
T ss_dssp             ----------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHH--HH
T ss_pred             ----------cCCCCchHHHHHHHHHHHHHHHHHHHhh---hcCcEEEEEecCccccccccccCCCcccccChHHH--HH
Confidence                      7778889999999999999999999998   78999999999999         777765432211  11


Q ss_pred             HHHHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017812          288 FTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  330 (365)
Q Consensus       288 ~~~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~  330 (365)
                      .....|++++.+|+|+|+.+++++... ...+|+++..++|...
T Consensus       202 ~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~~  245 (254)
T 1zmt_A          202 VKKVTALQRLGTQKELGELVAFLASGSCDYLTGQVFWLAGGFPM  245 (254)
T ss_dssp             HHHHSSSSSCBCHHHHHHHHHHHHTTSCGGGTTCEEEESTTCCC
T ss_pred             HhccCCCCCCcCHHHHHHHHHHHhCcccCCccCCEEEECCCchh
Confidence            222346678899999999999655432 2458999999998754

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=100.00  E-value=8.8e-39  Score=288.57  Aligned_cols=245  Identities=22%  Similarity=0.273  Sum_probs=195.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhc-----CCCceEEEEecCCChhhHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRN-----KDARLEAFQVDLSSFQSVLKFKD  130 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~-----~~~~~~~~~~Dls~~~~v~~~~~  130 (365)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.++++++.+++.+.+     +..++.++++|++|.++++++++
T Consensus         4 ~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   83 (264)
T 2pd6_A            4 RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLE   83 (264)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHH
Confidence            4789999999999999999999999999999999999988887776665432     11578899999999999999999


Q ss_pred             HHHHHHhccCCCCCe-eEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccc
Q 017812          131 SLQQWLLDSDMHSSI-QLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRN  207 (365)
Q Consensus       131 ~~~~~~~~~~~~~~i-d~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~  207 (365)
                      ++.+      .++++ |+||||||+..  +..+.+.+++++.+++|+.|+++++++++|.|.+++..|+||++||.++. 
T Consensus        84 ~~~~------~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~-  156 (264)
T 2pd6_A           84 QVQA------CFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGK-  156 (264)
T ss_dssp             HHHH------HHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHH-
T ss_pred             HHHH------HhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhc-
Confidence            9988      44778 99999999864  33567899999999999999999999999999865324899999999887 


Q ss_pred             cccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHH
Q 017812          208 VFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMA  287 (365)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~  287 (365)
                                         .+.++...|++||++++.++++++.|+.   +.||++++++||++.|++.+..+.... ..
T Consensus       157 -------------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~-~~  213 (264)
T 2pd6_A          157 -------------------VGNVGQTNYAASKAGVIGLTQTAARELG---RHGIRCNSVLPGFIATPMTQKVPQKVV-DK  213 (264)
T ss_dssp             -------------------HCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCSCC-----------C
T ss_pred             -------------------cCCCCChhhHHHHHHHHHHHHHHHHHhh---hcCeEEEEEeeecccccchhhcCHHHH-HH
Confidence                               6677889999999999999999999998   789999999999999998765322110 00


Q ss_pred             HHHHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017812          288 FTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  330 (365)
Q Consensus       288 ~~~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~  330 (365)
                      .....|.+++.+|+|+|+.+++++... ...+|+.+..++|..+
T Consensus       214 ~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~  257 (264)
T 2pd6_A          214 ITEMIPMGHLGDPEDVADVVAFLASEDSGYITGTSVEVTGGLFM  257 (264)
T ss_dssp             TGGGCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC--
T ss_pred             HHHhCCCCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCcee
Confidence            111124567889999999999665432 3568999999988765

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=100.00  E-value=8.6e-39  Score=283.02  Aligned_cols=218  Identities=21%  Similarity=0.194  Sum_probs=175.3

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhcc
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  139 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~  139 (365)
                      |++|||||++|||+++|++|+++|++|++++|+.++++++.+++     +.++.++.+|++|.++++++++++.+     
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~-----   71 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL-----SNNVGYRARDLASHQEVEQLFEQLDS-----   71 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC-----SSCCCEEECCTTCHHHHHHHHHSCSS-----
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH-----hhccCeEeecCCCHHHHHHHHHHHhh-----
Confidence            68999999999999999999999999999999999888777665     45788999999999999998876543     


Q ss_pred             CCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcc
Q 017812          140 DMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNET  217 (365)
Q Consensus       140 ~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~  217 (365)
                          ..|+||||||+..  +..+.+.+++++++++|+.|++++++.++|.|.+++  ++||++||.++.           
T Consensus        72 ----~~d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--~~iv~isS~~~~-----------  134 (230)
T 3guy_A           72 ----IPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQP--VNVVMIMSTAAQ-----------  134 (230)
T ss_dssp             ----CCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC--CEEEEECCGGGT-----------
T ss_pred             ----cCCEEEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--CeEEEEeecccC-----------
Confidence                3499999999863  345779999999999999999999999999998875  599999999988           


Q ss_pred             ccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhcCC
Q 017812          218 ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLL  297 (365)
Q Consensus       218 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  297 (365)
                               .+.++...|++||+|++.|+++++.|+.   +.||+|++|+||+|+|++.+.....         .+.+++
T Consensus       135 ---------~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gi~v~~v~PG~v~t~~~~~~~~~---------~~~~~~  193 (230)
T 3guy_A          135 ---------QPKAQESTYCAVKWAVKGLIESVRLELK---GKPMKIIAVYPGGMATEFWETSGKS---------LDTSSF  193 (230)
T ss_dssp             ---------SCCTTCHHHHHHHHHHHHHHHHHHHHTT---TSSCEEEEEEECCC-------------------------C
T ss_pred             ---------CCCCCCchhHHHHHHHHHHHHHHHHHHH---hcCeEEEEEECCcccChHHHhcCCC---------CCcccC
Confidence                     7888899999999999999999999998   8899999999999999998654321         235578


Q ss_pred             CCHHHHHHHHHHHhcCCC--CCcccEEeCC
Q 017812          298 QSPEKGINSVLDAALAPP--ETSGVYFFGG  325 (365)
Q Consensus       298 ~~p~e~A~~i~~~~l~~~--~~~G~~~~~~  325 (365)
                      .+|+|+|+.+++++..++  ..+|+.+..+
T Consensus       194 ~~~~dvA~~i~~l~~~~~~~~itg~~~~~~  223 (230)
T 3guy_A          194 MSAEDAALMIHGALANIGNGYVSDITVNRE  223 (230)
T ss_dssp             CCHHHHHHHHHHHCCEETTEEEEEEEEEC-
T ss_pred             CCHHHHHHHHHHHHhCcCCCCccceeecCC
Confidence            899999999995443222  2356666533

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=100.00  E-value=7e-38  Score=279.45  Aligned_cols=230  Identities=25%  Similarity=0.356  Sum_probs=197.9

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCC-------EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHH
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGF-------HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDS  131 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~-------~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~  131 (365)
                      +|+++||||++|||+++|++|+++|+       +|++++|+.++++++.+++...  +.++.++++|++|++++++++++
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~   79 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE--GALTDTITADISDMADVRRLTTH   79 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTT--TCEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHcc--CCeeeEEEecCCCHHHHHHHHHH
Confidence            68999999999999999999999999       9999999999888888887654  45789999999999999999999


Q ss_pred             HHHHHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccc
Q 017812          132 LQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVF  209 (365)
Q Consensus       132 ~~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~  209 (365)
                      +.+      .++++|+||||||+..  +..+.+.+++++++++|+.|++.++++++|+|++++ .++||++||.++.   
T Consensus        80 ~~~------~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~---  149 (244)
T 2bd0_A           80 IVE------RYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQH-SGHIFFITSVAAT---  149 (244)
T ss_dssp             HHH------HTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT---
T ss_pred             HHH------hCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEEecchhc---
Confidence            988      5688999999999863  345678999999999999999999999999998765 6899999999988   


Q ss_pred             cccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHH
Q 017812          210 NAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFT  289 (365)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~  289 (365)
                                       .+.++...|++||++++.|+++++.|+.   +.||++++++||++.|++....+...      
T Consensus       150 -----------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~------  203 (244)
T 2bd0_A          150 -----------------KAFRHSSIYCMSKFGQRGLVETMRLYAR---KCNVRITDVQPGAVYTPMWGKVDDEM------  203 (244)
T ss_dssp             -----------------SCCTTCHHHHHHHHHHHHHHHHHHHHHT---TTTEEEEEEEECCBCSTTTCCCCSTT------
T ss_pred             -----------------CCCCCCchhHHHHHHHHHHHHHHHHHhh---ccCcEEEEEECCCccchhhhhccccc------
Confidence                             6778889999999999999999999998   78999999999999999986543211      


Q ss_pred             HHHHhcCCCCHHHHHHHHHHHhcCCC-CCcccEEeCCCCccc
Q 017812          290 VLKLLGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKGRTV  330 (365)
Q Consensus       290 ~~~~~~~~~~p~e~A~~i~~~~l~~~-~~~G~~~~~~~g~~~  330 (365)
                          ..++.+|+|+|+.+++++..+. ...|+.+..++++..
T Consensus       204 ----~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~~~~~  241 (244)
T 2bd0_A          204 ----QALMMMPEDIAAPVVQAYLQPSRTVVEEIILRPTSGDI  241 (244)
T ss_dssp             ----GGGSBCHHHHHHHHHHHHTSCTTEEEEEEEEEETTCCC
T ss_pred             ----cccCCCHHHHHHHHHHHHhCCccccchheEEecccccc
Confidence                1256799999999997665432 446777776665544

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=5.3e-38  Score=289.34  Aligned_cols=268  Identities=18%  Similarity=0.199  Sum_probs=210.7

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhc---CCCceEEEEecCCChhhHHHHHHH
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRN---KDARLEAFQVDLSSFQSVLKFKDS  131 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~---~~~~~~~~~~Dls~~~~v~~~~~~  131 (365)
                      ..+++|+++||||++|||+++|++|+++|++|++++|+.++++++.+++....   .+.++.++++|++|.+++++++++
T Consensus        14 ~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   93 (303)
T 1yxm_A           14 GLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKS   93 (303)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHH
Confidence            35889999999999999999999999999999999999999988888887631   245789999999999999999999


Q ss_pred             HHHHHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccc
Q 017812          132 LQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVF  209 (365)
Q Consensus       132 ~~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~  209 (365)
                      +.+      .++++|+||||||+..  +..+.+.+++++++++|+.|+++++++++|.+.+++ .|+||++||.+ .   
T Consensus        94 ~~~------~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~-~---  162 (303)
T 1yxm_A           94 TLD------TFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEH-GGSIVNIIVPT-K---  162 (303)
T ss_dssp             HHH------HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-CEEEEEECCCC-T---
T ss_pred             HHH------HcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhc-CCeEEEEEeec-c---
Confidence            988      4578999999999753  345678999999999999999999999999655443 58999999988 5   


Q ss_pred             cccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcc-ccchh--HHHHH
Q 017812          210 NAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIM-REVPS--FLSLM  286 (365)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~-~~~~~--~~~~~  286 (365)
                                       .+.++...|++||+++.+++++++.|+.   ..||++++|+||+|.|++. .....  .....
T Consensus       163 -----------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~  222 (303)
T 1yxm_A          163 -----------------AGFPLAVHSGAARAGVYNLTKSLALEWA---CSGIRINCVAPGVIYSQTAVENYGSWGQSFFE  222 (303)
T ss_dssp             -----------------TCCTTCHHHHHHHHHHHHHHHHHHHHTG---GGTEEEEEEEECSBCCTGGGTTSGGGGGGGGT
T ss_pred             -----------------cCCCcchhhHHHHHHHHHHHHHHHHHhc---ccCeEEEEEecCCcccchhhhhccccchHHHH
Confidence                             5677788999999999999999999997   7899999999999999953 22211  00000


Q ss_pred             HHHHHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccccCCc--------ccCCHHHHHHHHHHHHHhh
Q 017812          287 AFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVNSSA--------LSFNSKLAGELWTTSCNLF  353 (365)
Q Consensus       287 ~~~~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~~~~~--------~~~d~~~~~~lw~~~~~~~  353 (365)
                      ......|.+++.+|+|+|+.+++++... ...+|+.+..++|.......        ...++.....+|+..+.+.
T Consensus       223 ~~~~~~p~~~~~~~~dvA~~i~~l~~~~~~~~~G~~~~v~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (303)
T 1yxm_A          223 GSFQKIPAKRIGVPEEVSSVVCFLLSPAASFITGQSVDVDGGRSLYTHSYEVPDHDNWPKGAGDLSVVKKMKETFK  298 (303)
T ss_dssp             TGGGGSTTSSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCBTTCCCCCCSCCCCCSSCCHHHHHHHHHHH
T ss_pred             HHHhcCcccCCCCHHHHHHHHHHHhCcccccCCCcEEEECCCeeccccCCCCcchhccCccccchhHHHhcccccc
Confidence            1111235667889999999999655332 35689999999987653221        1122233355666665554

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=4.6e-38  Score=313.94  Aligned_cols=249  Identities=21%  Similarity=0.241  Sum_probs=198.5

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      .+++||+++||||++|||+++|++|+++|++|++.+|+.  ++++.+++.+.  +.++..+.+|++  ++.+++++++.+
T Consensus       318 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~--~~~~~~~i~~~--g~~~~~~~~Dv~--~~~~~~~~~~~~  391 (604)
T 2et6_A          318 VSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKD--ATKTVDEIKAA--GGEAWPDQHDVA--KDSEAIIKNVID  391 (604)
T ss_dssp             CCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSC--CHHHHHHHHHT--TCEEEEECCCHH--HHHHHHHHHHHH
T ss_pred             cccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCcc--HHHHHHHHHhc--CCeEEEEEcChH--HHHHHHHHHHHH
Confidence            358899999999999999999999999999999998743  35666677654  456778888984  445677888777


Q ss_pred             HHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017812          135 WLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~  212 (365)
                            .+++||+||||||+..  +..+++.++|+++++||+.|+++++++++|+|++++ .|+||++||.++.      
T Consensus       392 ------~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IVnisS~ag~------  458 (604)
T 2et6_A          392 ------KYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQ-FGRIINITSTSGI------  458 (604)
T ss_dssp             ------HHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCHHHH------
T ss_pred             ------hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECChhhc------
Confidence                  4588999999999863  456889999999999999999999999999998775 6999999999988      


Q ss_pred             CCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHH
Q 017812          213 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLK  292 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~  292 (365)
                                    .+.+++..|++||+|+.+|+++|+.|++   ++||+||+|+||. .|+|.......          
T Consensus       459 --------------~~~~~~~~Y~asKaal~~lt~~la~El~---~~gIrVn~v~PG~-~T~m~~~~~~~----------  510 (604)
T 2et6_A          459 --------------YGNFGQANYSSSKAGILGLSKTMAIEGA---KNNIKVNIVAPHA-ETAMTLSIMRE----------  510 (604)
T ss_dssp             --------------SCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECC-CCCC-----------------
T ss_pred             --------------cCCCCChhHHHHHHHHHHHHHHHHHHhC---ccCeEEEEEcCCC-CCccccccCch----------
Confidence                          7788899999999999999999999998   8999999999995 99987643111          


Q ss_pred             HhcCCCCHHHHHHHHHHHhcCCC--CCcccEEeCCCCcccc----------CCcccCCHHHHHHHHHHHHHh
Q 017812          293 LLGLLQSPEKGINSVLDAALAPP--ETSGVYFFGGKGRTVN----------SSALSFNSKLAGELWTTSCNL  352 (365)
Q Consensus       293 ~~~~~~~p~e~A~~i~~~~l~~~--~~~G~~~~~~~g~~~~----------~~~~~~d~~~~~~lw~~~~~~  352 (365)
                      ......+|+|+|..++  +|.++  ..+|+.+..++|....          +.....+++.....|+...+.
T Consensus       511 ~~~~~~~pe~vA~~v~--~L~s~~~~itG~~~~vdGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  580 (604)
T 2et6_A          511 QDKNLYHADQVAPLLV--YLGTDDVPVTGETFEIGGGWIGNTRWQRAKGAVSHDEHTTVEFIKEHLNEITDF  580 (604)
T ss_dssp             --CCSSCGGGTHHHHH--HTTSTTCCCCSCEEEEETTEEEEEEEEECCCEECCSSSCCHHHHHHHHHHHTCC
T ss_pred             hhccCCCHHHHHHHHH--HHhCCccCCCCcEEEECCCeeEeeeeeccccccCCCCCCCHHHHHHHHHHHhcc
Confidence            0123469999999999  45444  2589999999886442          122334677777778865544

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=3.6e-38  Score=282.41  Aligned_cols=232  Identities=21%  Similarity=0.221  Sum_probs=185.9

Q ss_pred             CCCCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHH
Q 017812           52 PPITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDS  131 (365)
Q Consensus        52 ~~~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~  131 (365)
                      +...+++||+++||||++|||+++|++|+++|++|++++|+++.++    ++     + .+.++ +|+  .+++++++++
T Consensus        12 ~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~----~~-----~-~~~~~-~D~--~~~~~~~~~~   78 (249)
T 1o5i_A           12 HMELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLK----RS-----G-HRYVV-CDL--RKDLDLLFEK   78 (249)
T ss_dssp             ----CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH----HT-----C-SEEEE-CCT--TTCHHHHHHH
T ss_pred             hHHhccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHH----hh-----C-CeEEE-eeH--HHHHHHHHHH
Confidence            3455789999999999999999999999999999999999974322    22     2 56677 999  5677777664


Q ss_pred             HHHHHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccc
Q 017812          132 LQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVF  209 (365)
Q Consensus       132 ~~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~  209 (365)
                      +          .++|+||||||+..  +..+.+.+++++++++|+.|++++++.++|.|++++ .|+||++||.++.   
T Consensus        79 ~----------~~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~---  144 (249)
T 1o5i_A           79 V----------KEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKG-WGRIVAITSFSVI---  144 (249)
T ss_dssp             S----------CCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT---
T ss_pred             h----------cCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcchHhc---
Confidence            3          36999999999863  345778999999999999999999999999998765 6899999999988   


Q ss_pred             cccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHH
Q 017812          210 NAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFT  289 (365)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~  289 (365)
                                       .+.++...|++||++++.|+++++.|++   +.||+|++|+||+++|++..............
T Consensus       145 -----------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~  204 (249)
T 1o5i_A          145 -----------------SPIENLYTSNSARMALTGFLKTLSFEVA---PYGITVNCVAPGWTETERVKELLSEEKKKQVE  204 (249)
T ss_dssp             -----------------SCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCCTTHHHHSCHHHHHHHH
T ss_pred             -----------------CCCCCCchHHHHHHHHHHHHHHHHHHhh---hcCeEEEEEeeCCCccCcccccchhhHHHHHH
Confidence                             6778889999999999999999999998   78999999999999999875432211110111


Q ss_pred             HHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017812          290 VLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  330 (365)
Q Consensus       290 ~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~  330 (365)
                      ...|++++.+|+|+|+.+++++... ...+|+.+..++|...
T Consensus       205 ~~~p~~~~~~~~dvA~~i~~l~s~~~~~~tG~~~~vdgG~~~  246 (249)
T 1o5i_A          205 SQIPMRRMAKPEEIASVVAFLCSEKASYLTGQTIVVDGGLSK  246 (249)
T ss_dssp             TTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred             hcCCCCCCcCHHHHHHHHHHHcCccccCCCCCEEEECCCccc
Confidence            2245678889999999999655432 3568999999988653

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=100.00  E-value=5.6e-38  Score=280.08  Aligned_cols=237  Identities=23%  Similarity=0.319  Sum_probs=198.4

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEE-ecCchhHHHHHHHHHhhcCCCceEE-EEecCCChhhHHHHHHHHHHHH
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLV-GRSSHLLSETMADITSRNKDARLEA-FQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~-~r~~~~~~~~~~~l~~~~~~~~~~~-~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      +|+++||||++|||+++|++|+++|++|+++ +|+.++++++.+++...  +.++.. +.+|++|.++++++++++.+  
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~--   76 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRR--GSPLVAVLGANLLEAEAATALVHQAAE--   76 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHT--TCSCEEEEECCTTSHHHHHHHHHHHHH--
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCceEEEEeccCCCHHHHHHHHHHHHH--
Confidence            4789999999999999999999999999998 89998888888887665  345666 89999999999999999988  


Q ss_pred             hccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017812          137 LDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  214 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~  214 (365)
                          .++++|+||||||+..  +..+.+.+++++++++|+.|++++++.++|.|++++ .++||++||.++.        
T Consensus        77 ----~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~--------  143 (245)
T 2ph3_A           77 ----VLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKAR-FGRIVNITSVVGI--------  143 (245)
T ss_dssp             ----HHTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHH--------
T ss_pred             ----hcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcC-CCEEEEEeChhhc--------
Confidence                4478999999999864  345678999999999999999999999999998765 6899999999877        


Q ss_pred             CccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHh
Q 017812          215 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLL  294 (365)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  294 (365)
                                  .+.++...|++||++++.++++++.|+.   +.||++++++||++.|++.+..+.... .......+.
T Consensus       144 ------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~-~~~~~~~~~  207 (245)
T 2ph3_A          144 ------------LGNPGQANYVASKAGLIGFTRAVAKEYA---QRGITVNAVAPGFIETEMTERLPQEVK-EAYLKQIPA  207 (245)
T ss_dssp             ------------HCCSSBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCCHHHHTSCHHHH-HHHHHTCTT
T ss_pred             ------------cCCCCCcchHHHHHHHHHHHHHHHHHHH---HcCeEEEEEEEEeecCcchhhcCHHHH-HHHHhcCCC
Confidence                        5667788999999999999999999997   789999999999999998765432211 111122355


Q ss_pred             cCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCc
Q 017812          295 GLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  328 (365)
Q Consensus       295 ~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~  328 (365)
                      +++.+|+|+|+.+++++... ...+|+.+..++|.
T Consensus       208 ~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~  242 (245)
T 2ph3_A          208 GRFGRPEEVAEAVAFLVSEKAGYITGQTLCVDGGL  242 (245)
T ss_dssp             CSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred             CCCcCHHHHHHHHHHHhCcccccccCCEEEECCCC
Confidence            67889999999999655432 24579999888875

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=5.6e-38  Score=313.30  Aligned_cols=250  Identities=22%  Similarity=0.264  Sum_probs=201.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCc---------hhHHHHHHHHHhhcCCCceEEEEecCCChhhHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS---------HLLSETMADITSRNKDARLEAFQVDLSSFQSVL  126 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~---------~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~  126 (365)
                      +++||+++||||++|||+++|++|+++|++|++++|+.         +.++++.+++.+.+  .++   .+|++|.++++
T Consensus         5 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g--~~~---~~d~~d~~~~~   79 (604)
T 2et6_A            5 DFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNG--GVA---VADYNNVLDGD   79 (604)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTT--CEE---EEECCCTTCHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcC--CeE---EEEcCCHHHHH
Confidence            47899999999999999999999999999999998765         67888888887653  232   36999999999


Q ss_pred             HHHHHHHHHHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017812          127 KFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  204 (365)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~  204 (365)
                      ++++++.+      .+++||+||||||+..  +..+++.++|+++++||+.|+++++++++|+|++++ .|+||++||.+
T Consensus        80 ~~v~~~~~------~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~-~G~IVnisS~a  152 (604)
T 2et6_A           80 KIVETAVK------NFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQK-YGRIVNTSSPA  152 (604)
T ss_dssp             HHHHHHHH------HHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHH
T ss_pred             HHHHHHHH------HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECCHH
Confidence            99999888      4588999999999863  456889999999999999999999999999998765 69999999999


Q ss_pred             ccccccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHH
Q 017812          205 HRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLS  284 (365)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~  284 (365)
                      +.                    .+.+++..|++||+|+.+|+++|+.|++   ++||+||+|+|| +.|+|........ 
T Consensus       153 g~--------------------~~~~~~~~Y~asKaal~~lt~~la~El~---~~gIrVn~v~Pg-~~T~m~~~~~~~~-  207 (604)
T 2et6_A          153 GL--------------------YGNFGQANYASAKSALLGFAETLAKEGA---KYNIKANAIAPL-ARSRMTESIMPPP-  207 (604)
T ss_dssp             HH--------------------HCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEEC-CCCHHHHTTSCHH-
T ss_pred             Hc--------------------CCCCCchHHHHHHHHHHHHHHHHHHHhC---ccCeEEEEEccC-CcCccccccCChh-
Confidence            88                    7778899999999999999999999998   899999999998 6888865431110 


Q ss_pred             HHHHHHHHHhcCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccccC-----------CcccCCHHHHHHHHHHHHH
Q 017812          285 LMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNS-----------SALSFNSKLAGELWTTSCN  351 (365)
Q Consensus       285 ~~~~~~~~~~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~~~-----------~~~~~d~~~~~~lw~~~~~  351 (365)
                               .....+|+|+|..+++++......+|+.+..++|.....           .....+++....-|+...+
T Consensus       208 ---------~~~~~~pe~vA~~v~~L~s~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  276 (604)
T 2et6_A          208 ---------MLEKLGPEKVAPLVLYLSSAENELTGQFFEVAAGFYAQIRWERSGGVLFKPDQSFTAEVVAKRFSEILD  276 (604)
T ss_dssp             ---------HHTTCSHHHHHHHHHHHTSSSCCCCSCEEEEETTEEEEEEEEECCCEECCSSTTCCHHHHHHHHHHHTC
T ss_pred             ---------hhccCCHHHHHHHHHHHhCCcccCCCCEEEECCCeEEEEEEEeccceecCCCCCCCHHHHHHHHHHhhc
Confidence                     012359999999999655443456899999888854321           1122345555557876543

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=100.00  E-value=2.8e-38  Score=283.86  Aligned_cols=235  Identities=19%  Similarity=0.266  Sum_probs=188.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCE-EEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCCh-hhHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFH-VVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF-QSVLKFKDSLQ  133 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~-Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~-~~v~~~~~~~~  133 (365)
                      ++++|+++||||++|||+++|++|+++|++ |++++|+.+.  +..+++.+..++.++.++.+|++|+ ++++++++++.
T Consensus         2 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~--~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   79 (254)
T 1sby_A            2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP--TALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIF   79 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH--HHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchH--HHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHH
Confidence            367999999999999999999999999996 9999998742  3334555544456889999999998 99999999998


Q ss_pred             HHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCC--CCCeEEEEcCCcccccccc
Q 017812          134 QWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP--VPSRIVNVTSFTHRNVFNA  211 (365)
Q Consensus       134 ~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~--~~g~iV~vsS~~~~~~~~~  211 (365)
                      +      .++++|+||||||+.      +.+++++++++|+.|++.++++++|.|.+++  ..|+||++||.++.     
T Consensus        80 ~------~~g~id~lv~~Ag~~------~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~-----  142 (254)
T 1sby_A           80 D------QLKTVDILINGAGIL------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGF-----  142 (254)
T ss_dssp             H------HHSCCCEEEECCCCC------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGT-----
T ss_pred             H------hcCCCCEEEECCccC------CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhc-----
Confidence            8      457899999999984      4577999999999999999999999997652  14899999999988     


Q ss_pred             cCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHH-HHHHHH
Q 017812          212 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLS-LMAFTV  290 (365)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~-~~~~~~  290 (365)
                                     .+.++...|++||++++.|+++++.++.   +.||+|++|+||+|+|++.+....... ......
T Consensus       143 ---------------~~~~~~~~Y~~sK~a~~~~~~~la~~~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~  204 (254)
T 1sby_A          143 ---------------NAIHQVPVYSASKAAVVSFTNSLAKLAP---ITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAE  204 (254)
T ss_dssp             ---------------SCCTTSHHHHHHHHHHHHHHHHHHHHHH---HHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHH
T ss_pred             ---------------cCCCCchHHHHHHHHHHHHHHHHHHHhc---cCCeEEEEEecCCccCccccccchhhhhhHHHHH
Confidence                           6778889999999999999999999986   679999999999999998754321100 000000


Q ss_pred             HHHhcCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcc
Q 017812          291 LKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRT  329 (365)
Q Consensus       291 ~~~~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~  329 (365)
                      ......+.+|+|+|+.+++++.  ...+|+.|..++|..
T Consensus       205 ~~~~~~~~~~~dvA~~i~~~~~--~~~~G~~~~v~gG~~  241 (254)
T 1sby_A          205 LLLSHPTQTSEQCGQNFVKAIE--ANKNGAIWKLDLGTL  241 (254)
T ss_dssp             HHTTSCCEEHHHHHHHHHHHHH--HCCTTCEEEEETTEE
T ss_pred             HHhcCCCCCHHHHHHHHHHHHH--cCCCCCEEEEeCCce
Confidence            1111123589999999997653  466899999898853

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=100.00  E-value=2.5e-37  Score=275.86  Aligned_cols=235  Identities=23%  Similarity=0.258  Sum_probs=192.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.++++++.+++    +  .+.++++|++|+++++++++     
T Consensus         4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~--~~~~~~~D~~~~~~~~~~~~-----   72 (244)
T 3d3w_A            4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC----P--GIEPVCVDLGDWEATERALG-----   72 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----T--TCEEEECCTTCHHHHHHHHT-----
T ss_pred             ccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc----C--CCCEEEEeCCCHHHHHHHHH-----
Confidence            478999999999999999999999999999999999988777665543    1  34667999999999888765     


Q ss_pred             HhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                           .++++|+||||||+..  +..+.+.+++++.+++|+.++++++++++|.|.+++..|+||++||..+.       
T Consensus        73 -----~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~-------  140 (244)
T 3d3w_A           73 -----SVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQ-------  140 (244)
T ss_dssp             -----TCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGT-------
T ss_pred             -----HcCCCCEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhc-------
Confidence                 3478999999999863  34567899999999999999999999999999865324899999999887       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc-hhHHHHHHHHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV-PSFLSLMAFTVLK  292 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~-~~~~~~~~~~~~~  292 (365)
                                   .+.++...|++||++++.++++++.|+.   +.||++++|+||+|.|++.+.. .............
T Consensus       141 -------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~  204 (244)
T 3d3w_A          141 -------------RAVTNHSVYCSTKGALDMLTKVMALELG---PHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRI  204 (244)
T ss_dssp             -------------SCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECCBTTTTHHHHSCSTTHHHHHHHTC
T ss_pred             -------------cCCCCCchHHHHHHHHHHHHHHHHHHhc---ccCeEEEEEEeccccccchhhhccChHHHHHHHhhC
Confidence                         6777889999999999999999999997   7899999999999999986532 1111111122223


Q ss_pred             HhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017812          293 LLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  329 (365)
Q Consensus       293 ~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~  329 (365)
                      |.+++.+|+|+|+.+++++... ...+|+.|..++|..
T Consensus       205 ~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~  242 (244)
T 3d3w_A          205 PLGKFAEVEHVVNAILFLLSDRSGMTTGSTLPVEGGFW  242 (244)
T ss_dssp             TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CCCCCcCHHHHHHHHHHHcCccccCCCCCEEEECCCcc
Confidence            5678899999999999665432 256899999888864

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=2e-37  Score=281.13  Aligned_cols=221  Identities=24%  Similarity=0.332  Sum_probs=191.1

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHH
Q 017812           54 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  133 (365)
Q Consensus        54 ~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~  133 (365)
                      ..++++|+++||||++|||+++|++|+++|++|++++|+.++++++.+++.+.  +.++.++.+|++|.++++++++++.
T Consensus        26 ~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~  103 (272)
T 1yb1_A           26 RKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL--GAKVHTFVVDCSNREDIYSSAKKVK  103 (272)
T ss_dssp             CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhc--CCeEEEEEeeCCCHHHHHHHHHHHH
Confidence            34588999999999999999999999999999999999999888888888765  4578999999999999999999998


Q ss_pred             HHHhccCCCCCeeEEEecCCcccC--CCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017812          134 QWLLDSDMHSSIQLLINNAGILAT--SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  211 (365)
Q Consensus       134 ~~~~~~~~~~~id~lv~nAG~~~~--~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~  211 (365)
                      +      .++++|+||||||+...  ..+.+.+++++.+++|+.|++.+++.++|.|++++ .++||++||.++.     
T Consensus       104 ~------~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~-----  171 (272)
T 1yb1_A          104 A------EIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNN-HGHIVTVASAAGH-----  171 (272)
T ss_dssp             H------HTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCC-C-----
T ss_pred             H------HCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEechhhc-----
Confidence            8      56889999999998643  34567889999999999999999999999998765 6899999999987     


Q ss_pred             cCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHH
Q 017812          212 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVL  291 (365)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~  291 (365)
                                     .+.++...|++||++++.++++++.|+....++||+|++|+||+|+|++.+..           .
T Consensus       172 ---------------~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~~-----------~  225 (272)
T 1yb1_A          172 ---------------VSVPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNP-----------S  225 (272)
T ss_dssp             ---------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCT-----------H
T ss_pred             ---------------CCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCccccc-----------c
Confidence                           66778899999999999999999999841114699999999999999996531           1


Q ss_pred             HHhcCCCCHHHHHHHHHHHhcCC
Q 017812          292 KLLGLLQSPEKGINSVLDAALAP  314 (365)
Q Consensus       292 ~~~~~~~~p~e~A~~i~~~~l~~  314 (365)
                      .+++++.+|+|+|+.+++++..+
T Consensus       226 ~~~~~~~~~~dva~~i~~~~~~~  248 (272)
T 1yb1_A          226 TSLGPTLEPEEVVNRLMHGILTE  248 (272)
T ss_dssp             HHHCCCCCHHHHHHHHHHHHHTT
T ss_pred             ccccCCCCHHHHHHHHHHHHHcC
Confidence            24567889999999999877554

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=100.00  E-value=6.3e-38  Score=281.83  Aligned_cols=241  Identities=22%  Similarity=0.255  Sum_probs=200.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecC-chhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRS-SHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      ++++|+++||||++|||+++|++|+++|++|++++|+ .++++++.+++...  +.++.++.+|++|+++++++++++.+
T Consensus         4 ~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (258)
T 3afn_B            4 DLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRAD--GGDAAFFAADLATSEACQQLVDEFVA   81 (258)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHH
Confidence            4679999999999999999999999999999999999 88888888888665  45789999999999999999999988


Q ss_pred             HHhccCCCCCeeEEEecCCc-c--cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCC----CCCeEEEEcCCcccc
Q 017812          135 WLLDSDMHSSIQLLINNAGI-L--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP----VPSRIVNVTSFTHRN  207 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~-~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~----~~g~iV~vsS~~~~~  207 (365)
                            .++++|+||||||+ .  .+..+.+.+++++++++|+.|++.++++++|.|.+++    ..++||++||..+. 
T Consensus        82 ------~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~-  154 (258)
T 3afn_B           82 ------KFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGH-  154 (258)
T ss_dssp             ------HHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHH-
T ss_pred             ------HcCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhc-
Confidence                  45789999999997 3  2345678899999999999999999999999997532    12899999999877 


Q ss_pred             cccccCCCccccccccccCC-CCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHH
Q 017812          208 VFNAQVNNETITGKFFLRSK-CYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLM  286 (365)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~  286 (365)
                                         . +.++...|++||++++.++++++.|+.   +.||++++|+||++.|++........ ..
T Consensus       155 -------------------~~~~~~~~~Y~~sK~a~~~~~~~~~~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~-~~  211 (258)
T 3afn_B          155 -------------------TGGGPGAGLYGAAKAFLHNVHKNWVDFHT---KDGVRFNIVSPGTVDTAFHADKTQDV-RD  211 (258)
T ss_dssp             -------------------HCCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBSSGGGTTCCHHH-HH
T ss_pred             -------------------cCCCCCchHHHHHHHHHHHHHHHHHHhhc---ccCeEEEEEeCCCcccccccccCHHH-HH
Confidence                               4 567788999999999999999999997   78999999999999999976542211 11


Q ss_pred             HHHHHHHhcCCCCHHHHHHHHHHHhcCCC--CCcccEEeCCCCc
Q 017812          287 AFTVLKLLGLLQSPEKGINSVLDAALAPP--ETSGVYFFGGKGR  328 (365)
Q Consensus       287 ~~~~~~~~~~~~~p~e~A~~i~~~~l~~~--~~~G~~~~~~~g~  328 (365)
                      ......|++++.+|+|+|+.+++++....  ..+|+.|..++|.
T Consensus       212 ~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gg~  255 (258)
T 3afn_B          212 RISNGIPMGRFGTAEEMAPAFLFFASHLASGYITGQVLDINGGQ  255 (258)
T ss_dssp             HHHTTCTTCSCBCGGGTHHHHHHHHCHHHHTTCCSEEEEESTTS
T ss_pred             HHhccCCCCcCCCHHHHHHHHHHHhCcchhccccCCEEeECCCc
Confidence            11112356678899999999996553221  4579999888875

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=100.00  E-value=9.9e-38  Score=296.09  Aligned_cols=261  Identities=13%  Similarity=0.012  Sum_probs=211.1

Q ss_pred             CCCCEEEEecCCChHHHH--HHHHHHHCCCEEEEEecCchh------------HHHHHHHHHhhcCCCceEEEEecCCCh
Q 017812           57 IKRPVCIVTGATSGLGAA--AAYALSREGFHVVLVGRSSHL------------LSETMADITSRNKDARLEAFQVDLSSF  122 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~--~a~~la~~G~~Vil~~r~~~~------------~~~~~~~l~~~~~~~~~~~~~~Dls~~  122 (365)
                      ..||+|||||||+|||++  +|+.|+++|++|++++|+.+.            .+.+.+.+.+.  +.++..+++|++|.
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~Dvtd~  135 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKK--GLVAKNFIEDAFSN  135 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHT--TCCEEEEESCTTCH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHc--CCcEEEEEeeCCCH
Confidence            479999999999999999  999999999999999997643            23333344333  56789999999999


Q ss_pred             hhHHHHHHHHHHHHhccCCCCCeeEEEecCCcc---------------cCC---------------------CCCCHHHH
Q 017812          123 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL---------------ATS---------------------SRLTPEGY  166 (365)
Q Consensus       123 ~~v~~~~~~~~~~~~~~~~~~~id~lv~nAG~~---------------~~~---------------------~~~~~~~~  166 (365)
                      ++++++++++.+      .+++||+||||||+.               .+.                     .+.+.++|
T Consensus       136 ~~v~~~v~~i~~------~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~  209 (418)
T 4eue_A          136 ETKDKVIKYIKD------EFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEI  209 (418)
T ss_dssp             HHHHHHHHHHHH------TTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHH
T ss_pred             HHHHHHHHHHHH------HcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHH
Confidence            999999999998      779999999999974               122                     24689999


Q ss_pred             hHhHHHHhHHHH-HHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCccccccccccCCCCChh--hhhhhhHHHHH
Q 017812          167 DQMMSTNYIGAF-FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCA--RIYEYSKLCLL  243 (365)
Q Consensus       167 ~~~~~vN~~~~~-~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~~sK~a~~  243 (365)
                      +.++++|..+.+ .+++.+.+.+...+ .|+||++||.++.                    .+.+.+  .+|++||+|++
T Consensus       210 ~~~~~vn~~~~~~~~~~~l~~~~~~~~-gg~IV~iSSi~~~--------------------~~~p~~~~~aY~ASKaAL~  268 (418)
T 4eue_A          210 EETRKVMGGEDWQEWCEELLYEDCFSD-KATTIAYSYIGSP--------------------RTYKIYREGTIGIAKKDLE  268 (418)
T ss_dssp             HHHHHHHSSHHHHHHHHHHHHTTCEEE-EEEEEEEECCCCG--------------------GGTTTTTTSHHHHHHHHHH
T ss_pred             HHHHHHhhHHHHHHHHHHHHHHhhhcC-CcEEEEEeCchhc--------------------CCCCccccHHHHHHHHHHH
Confidence            999999999988 77787776543333 5899999999987                    666777  99999999999


Q ss_pred             HHHHHHHHHhCCCCC-CCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhcCCCCCcccEE
Q 017812          244 IFSYELHRNLGLDKS-RHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYF  322 (365)
Q Consensus       244 ~~~~~la~e~~~~~~-~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~A~~i~~~~l~~~~~~G~~~  322 (365)
                      +|+++|+.|++   + .||+||+|+||+|.|++...++...... .....++++..+||++++.+.+++-. ...+|..+
T Consensus       269 ~ltrsLA~ELa---~~~GIrVN~V~PG~v~T~~s~~ip~~p~y~-~~~~~~mk~~G~~E~v~e~~~~L~sd-~~~~g~~~  343 (418)
T 4eue_A          269 DKAKLINEKLN---RVIGGRAFVSVNKALVTKASAYIPTFPLYA-AILYKVMKEKNIHENCIMQIERMFSE-KIYSNEKI  343 (418)
T ss_dssp             HHHHHHHHHHH---HHHSCEEEEEECCCCCCHHHHTSTTHHHHH-HHHHHHHHHTTCCCCHHHHHHHHHHH-TTSSSSCC
T ss_pred             HHHHHHHHHhC---CccCeEEEEEECCcCcChhhhcCCCCcHHH-HHHHHHHhhcCChHHHHHHHHHHhhc-cccCCCcc
Confidence            99999999998   7 7999999999999999988776533222 22334677788999999999965433 45678887


Q ss_pred             eCCCCccccCCcccCCHHHHHHHHHHHHH
Q 017812          323 FGGKGRTVNSSALSFNSKLAGELWTTSCN  351 (365)
Q Consensus       323 ~~~~g~~~~~~~~~~d~~~~~~lw~~~~~  351 (365)
                      ..|+|..+.+.+...+++.|+++-+.-++
T Consensus       344 ~~D~~~~~r~d~~e~~~~~q~~~~~~~~~  372 (418)
T 4eue_A          344 QFDDKGRLRMDDLELRKDVQDEVDRIWSN  372 (418)
T ss_dssp             CCCTTSCEESCTTTTCHHHHHHHHHHHHH
T ss_pred             ccCCCceeeCChhhcCHHHHHHHHHHHHH
Confidence            88888888899999999888655444433

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=100.00  E-value=1.3e-37  Score=300.92  Aligned_cols=240  Identities=19%  Similarity=0.214  Sum_probs=192.3

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      ..+++|++|||||++|||+++|++|+++|++|++++|+... +++.+...+.    .+.+++||++|.++++++++++.+
T Consensus       209 ~~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~-~~l~~~~~~~----~~~~~~~Dvtd~~~v~~~~~~~~~  283 (454)
T 3u0b_A          209 KPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAA-EDLKRVADKV----GGTALTLDVTADDAVDKITAHVTE  283 (454)
T ss_dssp             STTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGH-HHHHHHHHHH----TCEEEECCTTSTTHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccH-HHHHHHHHHc----CCeEEEEecCCHHHHHHHHHHHHH
Confidence            34689999999999999999999999999999999997532 2222222222    356899999999999999999988


Q ss_pred             HHhccCCCCC-eeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017812          135 WLLDSDMHSS-IQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  211 (365)
Q Consensus       135 ~~~~~~~~~~-id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~  211 (365)
                            .+++ ||+||||||+..  +..+.+.++|++++++|+.|+++++++++|.|.+++ .++||++||.++.     
T Consensus       284 ------~~g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~-~g~iV~iSS~a~~-----  351 (454)
T 3u0b_A          284 ------HHGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGE-GGRVIGLSSMAGI-----  351 (454)
T ss_dssp             ------HSTTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCT-TCEEEEECCHHHH-----
T ss_pred             ------HcCCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC-CCEEEEEeChHhC-----
Confidence                  4555 999999999974  345789999999999999999999999999998765 7999999999988     


Q ss_pred             cCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHH
Q 017812          212 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVL  291 (365)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~  291 (365)
                                     .+.+++..|++||+++++|+++++.|++   +.||+||+|+||+|+|+|.+..+..... .....
T Consensus       352 ---------------~g~~g~~~YaasKaal~~l~~~la~e~~---~~gI~vn~v~PG~v~T~~~~~~~~~~~~-~~~~~  412 (454)
T 3u0b_A          352 ---------------AGNRGQTNYATTKAGMIGLAEALAPVLA---DKGITINAVAPGFIETKMTEAIPLATRE-VGRRL  412 (454)
T ss_dssp             ---------------HCCTTCHHHHHHHHHHHHHHHHHHHHHH---TTTCEEEEEEECSBCC----------CH-HHHHS
T ss_pred             ---------------CCCCCCHHHHHHHHHHHHHHHHHHHHhh---hcCcEEEEEEcCcccChhhhhcchhhHH-HHHhh
Confidence                           7788999999999999999999999998   8899999999999999998765432211 11223


Q ss_pred             HHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017812          292 KLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  330 (365)
Q Consensus       292 ~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~  330 (365)
                      .++++..+|+|+|+.+++++... ...+|+.+.+|+|..+
T Consensus       413 ~~l~r~g~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~l  452 (454)
T 3u0b_A          413 NSLFQGGQPVDVAELIAYFASPASNAVTGNTIRVCGQAML  452 (454)
T ss_dssp             BTTSSCBCHHHHHHHHHHHHCGGGTTCCSCEEEESSSBSC
T ss_pred             ccccCCCCHHHHHHHHHHHhCCccCCCCCcEEEECCcccc
Confidence            45677889999999999554322 3568999999988654

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=4.7e-37  Score=279.76  Aligned_cols=245  Identities=23%  Similarity=0.308  Sum_probs=195.5

Q ss_pred             CCCCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHH
Q 017812           52 PPITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDS  131 (365)
Q Consensus        52 ~~~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~  131 (365)
                      +++.++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++...+...++.++.+|++|++++++++++
T Consensus        25 ~~m~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~  104 (279)
T 1xg5_A           25 PGMERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSA  104 (279)
T ss_dssp             TTCGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHH
T ss_pred             ccccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHH
Confidence            34556899999999999999999999999999999999999999988888887765456789999999999999999999


Q ss_pred             HHHHHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCC-CCeEEEEcCCccccc
Q 017812          132 LQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPV-PSRIVNVTSFTHRNV  208 (365)
Q Consensus       132 ~~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~-~g~iV~vsS~~~~~~  208 (365)
                      +.+      .++++|+||||||+..  +..+.+.+++++.+++|+.+++++++.++|.|++++. .|+||++||.++...
T Consensus       105 ~~~------~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~  178 (279)
T 1xg5_A          105 IRS------QHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRV  178 (279)
T ss_dssp             HHH------HHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSC
T ss_pred             HHH------hCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhccc
Confidence            887      4578999999999863  3456789999999999999999999999999987652 389999999987611


Q ss_pred             ccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcccc-chhHHHHHH
Q 017812          209 FNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE-VPSFLSLMA  287 (365)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~-~~~~~~~~~  287 (365)
                                        .+.++...|++||++++.|+++++.|+.. ...||++++|+||+|+|++... .......  
T Consensus       179 ------------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~~-~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~--  237 (279)
T 1xg5_A          179 ------------------LPLSVTHFYSATKYAVTALTEGLRQELRE-AQTHIRATCISPGVVETQFAFKLHDKDPEK--  237 (279)
T ss_dssp             ------------------CSCGGGHHHHHHHHHHHHHHHHHHHHHHH-TTCCCEEEEEEESCBCSSHHHHHTTTCHHH--
T ss_pred             ------------------CCCCCCchhHHHHHHHHHHHHHHHHHHhh-cCCCeEEEEEecCcccchhhhhhcccChhH--
Confidence                              35567889999999999999999999841 1479999999999999998532 1111111  


Q ss_pred             HHHHHHhcCCCCHHHHHHHHHHHhcCCC-CCcccEEe
Q 017812          288 FTVLKLLGLLQSPEKGINSVLDAALAPP-ETSGVYFF  323 (365)
Q Consensus       288 ~~~~~~~~~~~~p~e~A~~i~~~~l~~~-~~~G~~~~  323 (365)
                      .....+..++.+|+|+|+.+++++..+. ...|.+..
T Consensus       238 ~~~~~~~~~~~~~~dvA~~i~~l~~~~~~~~~g~i~i  274 (279)
T 1xg5_A          238 AAATYEQMKCLKPEDVAEAVIYVLSTPAHIQIGDIQM  274 (279)
T ss_dssp             HHHHHC---CBCHHHHHHHHHHHHHSCTTEEEEEEEE
T ss_pred             HhhhcccccCCCHHHHHHHHHHHhcCCcceEeeeEEE
Confidence            1111233467899999999997665543 23344433

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.9e-36  Score=281.14  Aligned_cols=189  Identities=21%  Similarity=0.305  Sum_probs=161.5

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecC-----chhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRS-----SHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDS  131 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~  131 (365)
                      +++|+++|||||+|||+++|++|+++|++|++++|+     .++++++.+.+...  +.++.++++|++|.+++++++++
T Consensus         3 m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~--~~~~~~~~~Dvtd~~~v~~~~~~   80 (324)
T 3u9l_A            3 MSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDN--DVDLRTLELDVQSQVSVDRAIDQ   80 (324)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHH--TCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhc--CCcEEEEEeecCCHHHHHHHHHH
Confidence            568999999999999999999999999999998876     45566666665554  46789999999999999999999


Q ss_pred             HHHHHhccCCCCCeeEEEecCCcc--cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccc
Q 017812          132 LQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVF  209 (365)
Q Consensus       132 ~~~~~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~  209 (365)
                      +.+      .++++|+||||||+.  .+..+.+.+++++++++|+.|+++++++++|+|++++ .|+||++||.++..  
T Consensus        81 ~~~------~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~-~g~iV~isS~~~~~--  151 (324)
T 3u9l_A           81 IIG------EDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQK-HGLLIWISSSSSAG--  151 (324)
T ss_dssp             HHH------HHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS--
T ss_pred             HHH------HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEecchhcc--
Confidence            988      458899999999986  3556789999999999999999999999999998876 69999999998761  


Q ss_pred             cccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcc
Q 017812          210 NAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIM  276 (365)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~  276 (365)
                                       .+.++...|++||+|+++++++++.|++   +.||+|++|+||+|.|++.
T Consensus       152 -----------------~~~~~~~~Y~asKaa~~~~~~~la~el~---~~gI~v~~v~PG~v~t~~~  198 (324)
T 3u9l_A          152 -----------------GTPPYLAPYFAAKAAMDAIAVQYARELS---RWGIETSIIVPGAFTSGTN  198 (324)
T ss_dssp             -----------------CCCSSCHHHHHHHHHHHHHHHHHHHHHH---TTTEEEEEEEECCC-----
T ss_pred             -----------------CCCCcchhHHHHHHHHHHHHHHHHHHhh---hhCcEEEEEECCccccCch
Confidence                             2346678999999999999999999998   7899999999999997764

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=100.00  E-value=9.6e-37  Score=270.43  Aligned_cols=222  Identities=24%  Similarity=0.303  Sum_probs=179.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .+|+++||||++|||+++|++|+++|++|++++|+.++++++.+++      .++.++.+|++|.++++++++++.+   
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~---   74 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAEL------EGALPLPGDVREEGDWARAVAAMEE---   74 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS------TTCEEEECCTTCHHHHHHHHHHHHH---
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh------hhceEEEecCCCHHHHHHHHHHHHH---
Confidence            4689999999999999999999999999999999988877666554      1678899999999999999999988   


Q ss_pred             ccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCC
Q 017812          138 DSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNN  215 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~  215 (365)
                         .++++|+||||||+..  +..+.+.+++++.+++|+.|++.+++.++|.|++++ .++||++||.++.         
T Consensus        75 ---~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~---------  141 (234)
T 2ehd_A           75 ---AFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRG-GGTIVNVGSLAGK---------  141 (234)
T ss_dssp             ---HHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEECCTTTT---------
T ss_pred             ---HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CcEEEEECCchhc---------
Confidence               4478999999999863  345678999999999999999999999999998875 6899999999987         


Q ss_pred             ccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhc
Q 017812          216 ETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLG  295 (365)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  295 (365)
                                 .+.++...|++||++++.++++++.|+.   +.||++++|+||+++|++....+..     .       
T Consensus       142 -----------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~-----~-------  195 (234)
T 2ehd_A          142 -----------NPFKGGAAYNASKFGLLGLAGAAMLDLR---EANVRVVNVLPGSVDTGFAGNTPGQ-----A-------  195 (234)
T ss_dssp             -----------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEECC--------------------------
T ss_pred             -----------CCCCCCchhhHHHHHHHHHHHHHHHHHh---hcCcEEEEEEeCCCcCCcccccccc-----c-------
Confidence                       6777889999999999999999999998   7899999999999999987643211     0       


Q ss_pred             CCCCHHHHHHHHHHHhcCCC-CCcccEEeCCCC
Q 017812          296 LLQSPEKGINSVLDAALAPP-ETSGVYFFGGKG  327 (365)
Q Consensus       296 ~~~~p~e~A~~i~~~~l~~~-~~~G~~~~~~~g  327 (365)
                      ...+|+|+|+.+++++..+. ..+|+....+..
T Consensus       196 ~~~~~~dvA~~~~~l~~~~~~~~~g~~~~~~~~  228 (234)
T 2ehd_A          196 WKLKPEDVAQAVLFALEMPGHAMVSEIELRPTR  228 (234)
T ss_dssp             --CCHHHHHHHHHHHHHSCCSSCCCEEECCC--
T ss_pred             CCCCHHHHHHHHHHHhCCCcccccceEEEeecC
Confidence            13599999999997765543 456777665443

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-36  Score=271.60  Aligned_cols=236  Identities=25%  Similarity=0.303  Sum_probs=191.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++      ..+.++.+|++|+++++++++     
T Consensus         4 ~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~-----   72 (244)
T 1cyd_A            4 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC------PGIEPVCVDLGDWDATEKALG-----   72 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS------TTCEEEECCTTCHHHHHHHHT-----
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc------cCCCcEEecCCCHHHHHHHHH-----
Confidence            478999999999999999999999999999999999988776655442      235667999999999888765     


Q ss_pred             HhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                           .++++|+||||||+..  +..+.+.+++++.+++|+.|++.++++++|.|.+++..++||++||..+.       
T Consensus        73 -----~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~-------  140 (244)
T 1cyd_A           73 -----GIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAH-------  140 (244)
T ss_dssp             -----TCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGT-------
T ss_pred             -----HcCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhc-------
Confidence                 3478999999999863  34567899999999999999999999999999865324899999999887       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc-hhHHHHHHHHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV-PSFLSLMAFTVLK  292 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~-~~~~~~~~~~~~~  292 (365)
                                   .+.++...|++||++++.+++++++|+.   .+||++++++||++.|++.+.. .............
T Consensus       141 -------------~~~~~~~~Y~~sK~a~~~~~~~~a~~~~---~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~  204 (244)
T 1cyd_A          141 -------------VTFPNLITYSSTKGAMTMLTKAMAMELG---PHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERH  204 (244)
T ss_dssp             -------------SCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHS
T ss_pred             -------------CCCCCcchhHHHHHHHHHHHHHHHHHhh---hcCeEEEEEecCcccCccccccccCHHHHHHHHhcC
Confidence                         6677889999999999999999999997   7899999999999999986532 1111111122223


Q ss_pred             HhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017812          293 LLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  330 (365)
Q Consensus       293 ~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~  330 (365)
                      +++++.+|+|+|+++++++... ...+|+.+..++|..+
T Consensus       205 ~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~~  243 (244)
T 1cyd_A          205 PLRKFAEVEDVVNSILFLLSDRSASTSGGGILVDAGYLA  243 (244)
T ss_dssp             TTSSCBCHHHHHHHHHHHHSGGGTTCCSSEEEESTTGGG
T ss_pred             CccCCCCHHHHHHHHHHHhCchhhcccCCEEEECCCccC
Confidence            5678889999999999655432 2467999988888643

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=100.00  E-value=1.6e-37  Score=285.46  Aligned_cols=243  Identities=13%  Similarity=0.124  Sum_probs=184.6

Q ss_pred             CCCCCEEEEecCC--ChHHHHHHHHHHHCCCEEEEEecCchhHH-------HHHHHHHhhcCC---CceEEEEec-----
Q 017812           56 GIKRPVCIVTGAT--SGLGAAAAYALSREGFHVVLVGRSSHLLS-------ETMADITSRNKD---ARLEAFQVD-----  118 (365)
Q Consensus        56 ~~~~k~vlITGas--sGIG~~~a~~la~~G~~Vil~~r~~~~~~-------~~~~~l~~~~~~---~~~~~~~~D-----  118 (365)
                      +++||++|||||+  +|||+++|++|+++|++|++++|++....       +..+++.+...+   .....+.+|     
T Consensus         5 ~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (297)
T 1d7o_A            5 DLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDN   84 (297)
T ss_dssp             CCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCS
T ss_pred             ccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhhhhhccccccccccccccceeccc
Confidence            3789999999999  99999999999999999999998642110       000111110001   112344443     


Q ss_pred             ---C----CC--------hhhHHHHHHHHHHHHhccCCCCCeeEEEecCCcc----cCCCCCCHHHHhHhHHHHhHHHHH
Q 017812          119 ---L----SS--------FQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL----ATSSRLTPEGYDQMMSTNYIGAFF  179 (365)
Q Consensus       119 ---l----s~--------~~~v~~~~~~~~~~~~~~~~~~~id~lv~nAG~~----~~~~~~~~~~~~~~~~vN~~~~~~  179 (365)
                         +    +|        +++++++++++.+      .++++|+||||||+.    .+..+.+.++|++++++|+.|+++
T Consensus        85 ~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~------~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~  158 (297)
T 1d7o_A           85 PEDVPEDVKANKRYAGSSNWTVQEAAECVRQ------DFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVS  158 (297)
T ss_dssp             GGGSCHHHHTSHHHHHCCCCSHHHHHHHHHH------HHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHH
T ss_pred             hhhhhhhhhccccccccCHHHHHHHHHHHHH------HcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHH
Confidence               2    22        6789999999888      457899999999974    344678999999999999999999


Q ss_pred             HHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCccccccccccCCCCChh-hhhhhhHHHHHHHHHHHHHHhCCCCC
Q 017812          180 LTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCA-RIYEYSKLCLLIFSYELHRNLGLDKS  258 (365)
Q Consensus       180 l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~sK~a~~~~~~~la~e~~~~~~  258 (365)
                      ++++++|+|++   .|+||++||.++.                    .+.++. ..|++||+|+++|+++++.|++   +
T Consensus       159 l~~~~~~~m~~---~g~iv~isS~~~~--------------------~~~~~~~~~Y~asKaa~~~~~~~la~e~~---~  212 (297)
T 1d7o_A          159 LLSHFLPIMNP---GGASISLTYIASE--------------------RIIPGYGGGMSSAKAALESDTRVLAFEAG---R  212 (297)
T ss_dssp             HHHHHGGGEEE---EEEEEEEECGGGT--------------------SCCTTCTTTHHHHHHHHHHHHHHHHHHHH---H
T ss_pred             HHHHHHHHhcc---CceEEEEeccccc--------------------cCCCCcchHHHHHHHHHHHHHHHHHHHhC---c
Confidence            99999999975   3899999999987                    666666 6899999999999999999996   4


Q ss_pred             -CCeEEEEecCCcccCCccccchhHHHH-HHHHHHHHhcCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCccc
Q 017812          259 -RHVSVIAADPGVVKTNIMREVPSFLSL-MAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTV  330 (365)
Q Consensus       259 -~gi~v~~v~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~~~~~p~e~A~~i~~~~l~-~~~~~G~~~~~~~g~~~  330 (365)
                       .||+||+|+||+|+|++.+........ .......|++++.+|+|+|+.+++++.. +...+|+.+..++|...
T Consensus       213 ~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG~~~  287 (297)
T 1d7o_A          213 KQNIRVNTISAGPLGSRAAKAIGFIDTMIEYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNS  287 (297)
T ss_dssp             HHCCEEEEEEECCCBCCCSSCCSHHHHHHHHHHHHSSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred             ccCcEEEEEeccccccchhhhccccHHHHHHhhccCCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCcee
Confidence             699999999999999998764211111 1112234677889999999999954432 13568999999998765

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-36  Score=276.20  Aligned_cols=241  Identities=23%  Similarity=0.270  Sum_probs=198.1

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEec-CchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHH
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGR-SSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  133 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~  133 (365)
                      .++++|+++||||++|||+++|++|+++|++|++++| +.++++++.+++...  +.++.++++|++|+++++++++++.
T Consensus        17 ~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   94 (274)
T 1ja9_A           17 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKL--GAQGVAIQADISKPSEVVALFDKAV   94 (274)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999 778888888887664  4578899999999999999999988


Q ss_pred             HHHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017812          134 QWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  211 (365)
Q Consensus       134 ~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~  211 (365)
                      +      .++++|+||||||+..  +..+.+.+++++.+++|+.|+++++++++|.|++   .++||++||.++..    
T Consensus        95 ~------~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~iv~~sS~~~~~----  161 (274)
T 1ja9_A           95 S------HFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRR---GGRIILTSSIAAVM----  161 (274)
T ss_dssp             H------HHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEE---EEEEEEECCGGGTC----
T ss_pred             H------HcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh---CCEEEEEcChHhcc----
Confidence            8      4578999999999864  3346789999999999999999999999999973   38999999988750    


Q ss_pred             cCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcccc------------c
Q 017812          212 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE------------V  279 (365)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~------------~  279 (365)
                                     .+.++...|++||++++.++++++.|+.   .+||++++++||++.|++.+.            .
T Consensus       162 ---------------~~~~~~~~Y~~sK~a~~~~~~~~~~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~  223 (274)
T 1ja9_A          162 ---------------TGIPNHALYAGSKAAVEGFCRAFAVDCG---AKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGM  223 (274)
T ss_dssp             ---------------CSCCSCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTC
T ss_pred             ---------------CCCCCCchHHHHHHHHHHHHHHHHHHhh---hcCeEEEEEeeCcccccchhcccccccccccccC
Confidence                           2446678899999999999999999997   789999999999999998652            2


Q ss_pred             hhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCc
Q 017812          280 PSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGR  328 (365)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~  328 (365)
                      +............+.+++.+|+|+|+++++++... ...+|+.|..++|.
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~~~~~~~~~G~~~~v~gG~  273 (274)
T 1ja9_A          224 PQEKIDEGLANMNPLKRIGYPADIGRAVSALCQEESEWINGQVIKLTGGG  273 (274)
T ss_dssp             CHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             chHHHHHHHHhcCCCCCccCHHHHHHHHHHHhCcccccccCcEEEecCCc
Confidence            10111111122235667889999999999665432 24579999888774

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=100.00  E-value=1.6e-37  Score=287.79  Aligned_cols=243  Identities=16%  Similarity=0.137  Sum_probs=184.9

Q ss_pred             CCCCCEEEEecC--CChHHHHHHHHHHHCCCEEEEEecCchh------HH-HHHHHHHhhcCCC---ceEEEEec-----
Q 017812           56 GIKRPVCIVTGA--TSGLGAAAAYALSREGFHVVLVGRSSHL------LS-ETMADITSRNKDA---RLEAFQVD-----  118 (365)
Q Consensus        56 ~~~~k~vlITGa--ssGIG~~~a~~la~~G~~Vil~~r~~~~------~~-~~~~~l~~~~~~~---~~~~~~~D-----  118 (365)
                      +++||++|||||  ++|||+++|++|+++|++|++++|++..      .+ +..+++.+...+.   .+.++.+|     
T Consensus         6 ~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~   85 (315)
T 2o2s_A            6 DLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFDK   85 (315)
T ss_dssp             CCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTCSS
T ss_pred             cCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhccccccccccccccccccc
Confidence            378999999999  8999999999999999999999986420      00 0111121111111   12344443     


Q ss_pred             -------CCC--------hhhHHHHHHHHHHHHhccCCCCCeeEEEecCCcc----cCCCCCCHHHHhHhHHHHhHHHHH
Q 017812          119 -------LSS--------FQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL----ATSSRLTPEGYDQMMSTNYIGAFF  179 (365)
Q Consensus       119 -------ls~--------~~~v~~~~~~~~~~~~~~~~~~~id~lv~nAG~~----~~~~~~~~~~~~~~~~vN~~~~~~  179 (365)
                             ++|        +++++++++++.+      .++++|+||||||+.    .+..+.+.++|++++++|+.|+++
T Consensus        86 ~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~------~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~  159 (315)
T 2o2s_A           86 PEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQ------DLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVS  159 (315)
T ss_dssp             TTSSCHHHHTCGGGSSCCCCSHHHHHHHHHH------HHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHH
T ss_pred             cchhhhhhhcccccccCCHHHHHHHHHHHHH------hcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHH
Confidence                   443        6689999999988      457899999999975    344578999999999999999999


Q ss_pred             HHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCccccccccccCCCCChh-hhhhhhHHHHHHHHHHHHHHhCCCCC
Q 017812          180 LTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCA-RIYEYSKLCLLIFSYELHRNLGLDKS  258 (365)
Q Consensus       180 l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~sK~a~~~~~~~la~e~~~~~~  258 (365)
                      ++++++|+|++   .|+||++||.++.                    .+.++. ..|++||+|+++|+++|+.|++   +
T Consensus       160 l~~~~~~~m~~---~g~Iv~isS~~~~--------------------~~~~~~~~~Y~asKaal~~l~~~la~el~---~  213 (315)
T 2o2s_A          160 LLQHFGPIMNE---GGSAVTLSYLAAE--------------------RVVPGYGGGMSSAKAALESDTRTLAWEAG---Q  213 (315)
T ss_dssp             HHHHHSTTEEE---EEEEEEEEEGGGT--------------------SCCTTCCTTHHHHHHHHHHHHHHHHHHHH---H
T ss_pred             HHHHHHHHHhc---CCEEEEEeccccc--------------------ccCCCccHHHHHHHHHHHHHHHHHHHHhC---c
Confidence            99999999976   3899999999987                    566666 5899999999999999999996   4


Q ss_pred             -CCeEEEEecCCcccCCccccchh-----HHHH--HHHHHHHHhcCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCcc
Q 017812          259 -RHVSVIAADPGVVKTNIMREVPS-----FLSL--MAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRT  329 (365)
Q Consensus       259 -~gi~v~~v~PG~v~T~~~~~~~~-----~~~~--~~~~~~~~~~~~~~p~e~A~~i~~~~l~-~~~~~G~~~~~~~g~~  329 (365)
                       .||+||+|+||+|+|++.+....     ....  .......|++|+.+|+|+|+.+++++.. +...+|+++..|+|..
T Consensus       214 ~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~  293 (315)
T 2o2s_A          214 KYGVRVNAISAGPLKSRAASAIGKSGEKSFIDYAIDYSYNNAPLRRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGLH  293 (315)
T ss_dssp             HTCCEEEEEEECCCCCHHHHHTTCSSSSCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             ccCeEEEEEecccccchhhhhccccccchhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhCchhccCcCCEEEECCCee
Confidence             79999999999999998654321     1111  1112234778899999999999954432 1256899999999976


Q ss_pred             c
Q 017812          330 V  330 (365)
Q Consensus       330 ~  330 (365)
                      .
T Consensus       294 ~  294 (315)
T 2o2s_A          294 A  294 (315)
T ss_dssp             G
T ss_pred             e
Confidence            5

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=100.00  E-value=1.1e-37  Score=289.40  Aligned_cols=243  Identities=16%  Similarity=0.152  Sum_probs=157.5

Q ss_pred             CCCCCEEEEecC--CChHHHHHHHHHHHCCCEEEEEecCc-----------hhHH-----------HHHHHHHhhcCC-C
Q 017812           56 GIKRPVCIVTGA--TSGLGAAAAYALSREGFHVVLVGRSS-----------HLLS-----------ETMADITSRNKD-A  110 (365)
Q Consensus        56 ~~~~k~vlITGa--ssGIG~~~a~~la~~G~~Vil~~r~~-----------~~~~-----------~~~~~l~~~~~~-~  110 (365)
                      +++||++|||||  ++|||+++|++|+++|++|++++|++           ++++           ++.+++.+.+.. .
T Consensus         6 ~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (319)
T 2ptg_A            6 DLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLV   85 (319)
T ss_dssp             CCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------C
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhcccccc
Confidence            378999999999  89999999999999999999998753           2222           223333322110 0


Q ss_pred             ceEEEEec------------CCC--------hhhHHHHHHHHHHHHhccCCCCCeeEEEecCCcc----cCCCCCCHHHH
Q 017812          111 RLEAFQVD------------LSS--------FQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL----ATSSRLTPEGY  166 (365)
Q Consensus       111 ~~~~~~~D------------ls~--------~~~v~~~~~~~~~~~~~~~~~~~id~lv~nAG~~----~~~~~~~~~~~  166 (365)
                      ...++.+|            ++|        .++++++++++.+      .++++|+||||||+.    .+..+.+.++|
T Consensus        86 ~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~------~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~  159 (319)
T 2ptg_A           86 FDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRA------DVGQIDILVHSLANGPEVTKPLLQTSRKGY  159 (319)
T ss_dssp             CSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHH------HHSCEEEEEEEEECCSSSSSCGGGCCHHHH
T ss_pred             ccccccccccccccccccchhcccccccccCHHHHHHHHHHHHH------HcCCCCEEEECCccCCCCCCccccCCHHHH
Confidence            12344433            333        4589999999888      457899999999975    34567899999


Q ss_pred             hHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCccccccccccCCCCChh-hhhhhhHHHHHHH
Q 017812          167 DQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCA-RIYEYSKLCLLIF  245 (365)
Q Consensus       167 ~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~sK~a~~~~  245 (365)
                      ++++++|+.|+++++++++|+|++   .|+||++||.++.                    .+.++. ..|++||+|+++|
T Consensus       160 ~~~~~vN~~g~~~l~~~~~~~m~~---~g~Iv~isS~~~~--------------------~~~~~~~~~Y~asKaal~~l  216 (319)
T 2ptg_A          160 LAAVSSSSYSFVSLLQHFLPLMKE---GGSALALSYIASE--------------------KVIPGYGGGMSSAKAALESD  216 (319)
T ss_dssp             HHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEEECC--------------------------------------THHH
T ss_pred             HHHHhHhhHHHHHHHHHHHHHHhc---CceEEEEeccccc--------------------cccCccchhhHHHHHHHHHH
Confidence            999999999999999999999976   3899999999987                    666676 6899999999999


Q ss_pred             HHHHHHHhCCCCC-CCeEEEEecCCcccCCccccchhHH-----HH--HHHHHHHHhcCCCCHHHHHHHHHHHhcC-CCC
Q 017812          246 SYELHRNLGLDKS-RHVSVIAADPGVVKTNIMREVPSFL-----SL--MAFTVLKLLGLLQSPEKGINSVLDAALA-PPE  316 (365)
Q Consensus       246 ~~~la~e~~~~~~-~gi~v~~v~PG~v~T~~~~~~~~~~-----~~--~~~~~~~~~~~~~~p~e~A~~i~~~~l~-~~~  316 (365)
                      +++|+.|++   + .||+||+|+||+|+|++.+......     ..  .......|++|+.+|+|+|+.+++++.. +..
T Consensus       217 ~~~la~el~---~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~  293 (319)
T 2ptg_A          217 CRTLAFEAG---RARAVRVNCISAGPLKSRAASAIGKAGDKTFIDLAIDYSEANAPLQKELESDDVGRAALFLLSPLARA  293 (319)
T ss_dssp             HHHHHHHHH---HHHCCEEEEEEECCCC-------------------------------CCCHHHHHHHHHHHTSGGGTT
T ss_pred             HHHHHHHhc---cccCeeEEEEeeCCccChhhhhcccccchhhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhCcccCC
Confidence            999999996   5 6999999999999999976543110     00  0011234778899999999999954432 135


Q ss_pred             CcccEEeCCCCccc
Q 017812          317 TSGVYFFGGKGRTV  330 (365)
Q Consensus       317 ~~G~~~~~~~g~~~  330 (365)
                      .+|+.+.+|+|...
T Consensus       294 itG~~i~vdGG~~~  307 (319)
T 2ptg_A          294 VTGATLYVDNGLHA  307 (319)
T ss_dssp             CCSCEEEESTTCTT
T ss_pred             ccCCEEEECCCcee
Confidence            68999999999765

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=100.00  E-value=5.9e-37  Score=307.04  Aligned_cols=255  Identities=18%  Similarity=0.201  Sum_probs=194.2

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEec---------CchhHHHHHHHHHhhcCCCceEEEEecCCChhh
Q 017812           54 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGR---------SSHLLSETMADITSRNKDARLEAFQVDLSSFQS  124 (365)
Q Consensus        54 ~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r---------~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~  124 (365)
                      ..+++||++|||||++|||+++|++|+++|++|++++|         +.+.++++.+++...+  ..   ..+|++|.++
T Consensus        14 ~~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~--~~---~~~D~~d~~~   88 (613)
T 3oml_A           14 KLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAG--GE---AVADYNSVID   88 (613)
T ss_dssp             -CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTT--CC---EEECCCCGGG
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhC--Ce---EEEEeCCHHH
Confidence            34689999999999999999999999999999999988         7788888888887763  22   2489999999


Q ss_pred             HHHHHHHHHHHHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcC
Q 017812          125 VLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS  202 (365)
Q Consensus       125 v~~~~~~~~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS  202 (365)
                      ++++++++.+      .+++||+||||||+..  +..+.+.++|++++++|+.|+++++++++|+|++++ .|+||++||
T Consensus        89 ~~~~~~~~~~------~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~-~g~IV~isS  161 (613)
T 3oml_A           89 GAKVIETAIK------AFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQN-YGRIIMTSS  161 (613)
T ss_dssp             HHHHHC----------------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-CEEEEEECC
T ss_pred             HHHHHHHHHH------HCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEECC
Confidence            9999999887      6789999999999974  445789999999999999999999999999999876 799999999


Q ss_pred             CcccccccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH
Q 017812          203 FTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF  282 (365)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~  282 (365)
                      .++.                    .+.++...|++||+|+++|+++|+.|++   +.||+||+|+||.+ |++.......
T Consensus       162 ~a~~--------------------~~~~~~~~Y~asKaal~~lt~~la~e~~---~~gI~vn~v~Pg~~-t~~~~~~~~~  217 (613)
T 3oml_A          162 NSGI--------------------YGNFGQVNYTAAKMGLIGLANTVAIEGA---RNNVLCNVIVPTAA-SRMTEGILPD  217 (613)
T ss_dssp             HHHH--------------------HCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEEC-------CCCCCH
T ss_pred             HHHc--------------------CCCCCChHHHHHHHHHHHHHHHHHHHhC---ccCeEEEEEECCCC-Chhhhhccch
Confidence            9988                    7778899999999999999999999998   88999999999975 6666543221


Q ss_pred             HHHHHHHHHHHhcCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcccc------------CC-cccCCHHHHHHHHHHH
Q 017812          283 LSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN------------SS-ALSFNSKLAGELWTTS  349 (365)
Q Consensus       283 ~~~~~~~~~~~~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~~------------~~-~~~~d~~~~~~lw~~~  349 (365)
                      .          ..+..+|+|+|..+++++......+|+++..++|....            +. ....++|...+.|+..
T Consensus       218 ~----------~~~~~~pedvA~~v~~L~s~~~~~tG~~i~vdGG~~~~~~~~~~~g~~~~~~~~~~~~~e~~~~~w~~i  287 (613)
T 3oml_A          218 I----------LFNELKPKLIAPVVAYLCHESCEDNGSYIESAAGWATKLHMVRGKGAVLRPSLDDPVTIEYVKDVWSNV  287 (613)
T ss_dssp             H----------HHTTCCGGGTHHHHHHTTSTTCCCCSCEEEEETTEEEEECCCBCCCCCSSSSTTSCCCHHHHHHTHHHH
T ss_pred             h----------hhhcCCHHHHHHHHHHhcCCCcCCCceEEEECCCeEEEEEEEecCCEEecCccccCCCHHHHHHHHHHh
Confidence            1          12345999999999954433334689999888775431            11 2235678888899988


Q ss_pred             HHhhh
Q 017812          350 CNLFI  354 (365)
Q Consensus       350 ~~~~~  354 (365)
                      .++..
T Consensus       288 ~~~~~  292 (613)
T 3oml_A          288 TDMSK  292 (613)
T ss_dssp             TCCTT
T ss_pred             hcccc
Confidence            77654

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=1.2e-36  Score=272.03  Aligned_cols=231  Identities=23%  Similarity=0.300  Sum_probs=179.4

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCC--CEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREG--FHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G--~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      |++|+++||||++|||+++|++|+++|  ++|++++|+.++++++.+    . .+.++.++.+|++|.++++++++++.+
T Consensus         1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~----~-~~~~~~~~~~D~~~~~~~~~~~~~~~~   75 (250)
T 1yo6_A            1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS----I-KDSRVHVLPLTVTCDKSLDTFVSKVGE   75 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT----C-CCTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHh----c-cCCceEEEEeecCCHHHHHHHHHHHHH
Confidence            357999999999999999999999999  999999999887765432    1 255789999999999999999999988


Q ss_pred             HHhccCCCCCeeEEEecCCccc---CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcC------CC----CCeEEEEc
Q 017812          135 WLLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNS------PV----PSRIVNVT  201 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~------~~----~g~iV~vs  201 (365)
                      .++.    +++|+||||||+..   +..+.+.+++++++++|+.|++.++++++|.|.++      +.    .++||++|
T Consensus        76 ~~g~----~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~is  151 (250)
T 1yo6_A           76 IVGS----DGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITIS  151 (250)
T ss_dssp             HHGG----GCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEEC
T ss_pred             hcCC----CCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEec
Confidence            4421    17999999999864   33567899999999999999999999999999764      21    48999999


Q ss_pred             CCcccccccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh
Q 017812          202 SFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS  281 (365)
Q Consensus       202 S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~  281 (365)
                      |..+.......             ..+.++...|++||++++.++++++.|+.   +.||++++|+||+|+|++.+..  
T Consensus       152 S~~~~~~~~~~-------------~~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~Pg~v~t~~~~~~--  213 (250)
T 1yo6_A          152 SGLGSITDNTS-------------GSAQFPVLAYRMSKAAINMFGRTLAVDLK---DDNVLVVNFCPGWVQTNLGGKN--  213 (250)
T ss_dssp             CGGGCSTTCCS-------------TTSSSCBHHHHHHHHHHHHHHHHHHHHTG---GGTCEEEEEECCCC----------
T ss_pred             cCccccCCccc-------------ccccCCccHHHHHHHHHHHHHHHHHHHhc---cCCeEEEEEcCCceecCCCCCC--
Confidence            99876221000             01125678899999999999999999997   7899999999999999987531  


Q ss_pred             HHHHHHHHHHHHhcCCCCHHHHHHHHHHHhcCCC-CCcccEEeCCCCc
Q 017812          282 FLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKGR  328 (365)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~p~e~A~~i~~~~l~~~-~~~G~~~~~~~g~  328 (365)
                                    .+.+|+++|+.+++++.... ..+|+++..++|.
T Consensus       214 --------------~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g~~  247 (250)
T 1yo6_A          214 --------------AALTVEQSTAELISSFNKLDNSHNGRFFMRNLKP  247 (250)
T ss_dssp             -------------------HHHHHHHHHHHTTCCGGGTTCEEETTEEE
T ss_pred             --------------CCCCHHHHHHHHHHHHhcccccCCCeEEEECCcC
Confidence                          23599999999998776554 4589998876543

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=100.00  E-value=4.3e-37  Score=275.73  Aligned_cols=223  Identities=13%  Similarity=0.062  Sum_probs=186.0

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      .+..+|++|||||++|||+++|++|+++|++|++++|+.++.+              -..+.+|++|.++++++++++.+
T Consensus        18 ~~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~--------------~~~~~~d~~d~~~v~~~~~~~~~   83 (251)
T 3orf_A           18 GSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA--------------DHSFTIKDSGEEEIKSVIEKINS   83 (251)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS--------------SEEEECSCSSHHHHHHHHHHHHT
T ss_pred             ccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc--------------ccceEEEeCCHHHHHHHHHHHHH
Confidence            3455899999999999999999999999999999999986421              24678999999999999999987


Q ss_pred             HHhccCCCCCeeEEEecCCcccC---CCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017812          135 WLLDSDMHSSIQLLINNAGILAT---SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  211 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~~---~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~  211 (365)
                            .++++|+||||||+...   ..+.+.+++++++++|+.|++.++++++|.|++   .|+||++||.++.     
T Consensus        84 ------~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~isS~~~~-----  149 (251)
T 3orf_A           84 ------KSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQ---GGLFVLTGASAAL-----  149 (251)
T ss_dssp             ------TTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCGGGG-----
T ss_pred             ------HcCCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhcc---CCEEEEEechhhc-----
Confidence                  67899999999998643   446678999999999999999999999999976   3899999999988     


Q ss_pred             cCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHH
Q 017812          212 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVL  291 (365)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~  291 (365)
                                     .+.++...|++||+|++.|+++++.|++. .++||+|++|+||+|+|++.+.....         
T Consensus       150 ---------------~~~~~~~~Y~~sKaa~~~~~~~la~e~~~-~~~gi~v~~v~PG~v~t~~~~~~~~~---------  204 (251)
T 3orf_A          150 ---------------NRTSGMIAYGATKAATHHIIKDLASENGG-LPAGSTSLGILPVTLDTPTNRKYMSD---------  204 (251)
T ss_dssp             ---------------SCCTTBHHHHHHHHHHHHHHHHHTSTTSS-SCTTCEEEEEEESCBCCHHHHHHCTT---------
T ss_pred             ---------------cCCCCCchhHHHHHHHHHHHHHHHHHhcc-cCCCcEEEEEecCcCcCcchhhhccc---------
Confidence                           78888999999999999999999999631 15899999999999999986542211         


Q ss_pred             HHhcCCCCHHHHHHHHHHHhcC-C-CCCcccEEeCCCCccc
Q 017812          292 KLLGLLQSPEKGINSVLDAALA-P-PETSGVYFFGGKGRTV  330 (365)
Q Consensus       292 ~~~~~~~~p~e~A~~i~~~~l~-~-~~~~G~~~~~~~g~~~  330 (365)
                      .+.+++.+|+|+|+.+++++.. . ...+|+.+....|+..
T Consensus       205 ~~~~~~~~~~dva~~i~~l~~~~~~~~~tG~~i~v~~g~~~  245 (251)
T 3orf_A          205 ANFDDWTPLSEVAEKLFEWSTNSDSRPTNGSLVKFETKSKV  245 (251)
T ss_dssp             SCGGGSBCHHHHHHHHHHHHHCGGGCCCTTCEEEEEEETTE
T ss_pred             ccccccCCHHHHHHHHHHHhcCccccCCcceEEEEecCCcc
Confidence            1345678999999999976655 2 4568998877666543

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=100.00  E-value=3e-36  Score=272.45  Aligned_cols=233  Identities=20%  Similarity=0.239  Sum_probs=188.9

Q ss_pred             CCCCCCCCEEEEecCCChHHHHHHHHHHHCC---CEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHH
Q 017812           53 PITGIKRPVCIVTGATSGLGAAAAYALSREG---FHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFK  129 (365)
Q Consensus        53 ~~~~~~~k~vlITGassGIG~~~a~~la~~G---~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~  129 (365)
                      +..++++|++|||||++|||+++|++|+++|   ++|++++|+.++++.+ +++.+.  +.++.++.+|++|.+++++++
T Consensus        15 ~~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~-~~l~~~--~~~~~~~~~Dl~~~~~v~~~~   91 (267)
T 1sny_A           15 VPRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKEL-EDLAKN--HSNIHILEIDLRNFDAYDKLV   91 (267)
T ss_dssp             -----CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHH-HHHHHH--CTTEEEEECCTTCGGGHHHHH
T ss_pred             cccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHH-HHhhcc--CCceEEEEecCCChHHHHHHH
Confidence            3446889999999999999999999999999   9999999998776543 444444  357899999999999999999


Q ss_pred             HHHHHHHhccCCCCCeeEEEecCCccc---CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcC------CC----CCe
Q 017812          130 DSLQQWLLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNS------PV----PSR  196 (365)
Q Consensus       130 ~~~~~~~~~~~~~~~id~lv~nAG~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~------~~----~g~  196 (365)
                      +++.+.++.    .++|+||||||+..   +..+.+.+++++++++|+.|++.++++++|.|.++      +.    .++
T Consensus        92 ~~~~~~~g~----~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (267)
T 1sny_A           92 ADIEGVTKD----QGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAA  167 (267)
T ss_dssp             HHHHHHHGG----GCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCE
T ss_pred             HHHHHhcCC----CCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCce
Confidence            999884421    17999999999864   34567899999999999999999999999999865      11    489


Q ss_pred             EEEEcCCcccccccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcc
Q 017812          197 IVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIM  276 (365)
Q Consensus       197 iV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~  276 (365)
                      ||++||..+....                 .+.++...|++||++++.|+++++.|+.   +.||++++|+||+|+|++.
T Consensus       168 iv~isS~~~~~~~-----------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~Pg~v~t~~~  227 (267)
T 1sny_A          168 IINMSSILGSIQG-----------------NTDGGMYAYRTSKSALNAATKSLSVDLY---PQRIMCVSLHPGWVKTDMG  227 (267)
T ss_dssp             EEEECCGGGCSTT-----------------CCSCCCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEECCCSBCSTTT
T ss_pred             EEEEecccccccC-----------------CCCCCchHHHHHHHHHHHHHHHHHHHhh---cCCcEEEEeCCcceecCCC
Confidence            9999999876110                 1123667899999999999999999997   7899999999999999997


Q ss_pred             ccchhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhcCCC-CCcccEEeCCCCc
Q 017812          277 REVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKGR  328 (365)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~p~e~A~~i~~~~l~~~-~~~G~~~~~~~g~  328 (365)
                      ...                ...+|+++|+.+++++.... ..+|.++..++++
T Consensus       228 ~~~----------------~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g~~  264 (267)
T 1sny_A          228 GSS----------------APLDVPTSTGQIVQTISKLGEKQNGGFVNYDGTP  264 (267)
T ss_dssp             CTT----------------CSBCHHHHHHHHHHHHHHCCGGGTTCEECTTSCB
T ss_pred             CCC----------------CCCCHHHHHHHHHHHHHhcCcCCCCcEEccCCcC
Confidence            531                34699999999998776543 5689988766543

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=100.00  E-value=4.6e-37  Score=285.80  Aligned_cols=233  Identities=22%  Similarity=0.246  Sum_probs=179.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhh----cCCCceEEEEecCCChhhHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSR----NKDARLEAFQVDLSSFQSVLKFKDSLQ  133 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~----~~~~~~~~~~~Dls~~~~v~~~~~~~~  133 (365)
                      ++|+|+||||++|||+++|++|+++|++|++++|+.+++++..+.+...    ..+.++.++++|++|.++++++++++.
T Consensus         1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   80 (327)
T 1jtv_A            1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT   80 (327)
T ss_dssp             CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence            3789999999999999999999999999999988765554444443322    124578999999999999999988763


Q ss_pred             HHHhccCCCCCeeEEEecCCcc--cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017812          134 QWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  211 (365)
Q Consensus       134 ~~~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~  211 (365)
                              .+++|+||||||+.  .+..+.+.+++++++++|+.|+++++++++|+|++++ .|+||++||.++.     
T Consensus        81 --------~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-~g~IV~isS~~~~-----  146 (327)
T 1jtv_A           81 --------EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRG-SGRVLVTGSVGGL-----  146 (327)
T ss_dssp             --------TSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGT-----
T ss_pred             --------cCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEECCcccc-----
Confidence                    37899999999986  3445778999999999999999999999999998765 6999999999988     


Q ss_pred             cCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHH--------
Q 017812          212 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFL--------  283 (365)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~--------  283 (365)
                                     .+.++...|++||++++.|+++++.|++   +.||+|++|+||+|+|++........        
T Consensus       147 ---------------~~~~~~~~Y~aSK~a~~~~~~~la~el~---~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~  208 (327)
T 1jtv_A          147 ---------------MGLPFNDVYCASKFALEGLCESLAVLLL---PFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTD  208 (327)
T ss_dssp             ---------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECCBCC-------CCHHHHHHTSC
T ss_pred             ---------------cCCCCChHHHHHHHHHHHHHHHHHHHhh---hcCcEEEEEEeCcccChHHhhhhhcchhhhccCC
Confidence                           6778889999999999999999999998   78999999999999999976431100        


Q ss_pred             ---HH-H-HHH--HHHHhcCC-CCHHHHHHHHHHHhcCCCCCcccEEe
Q 017812          284 ---SL-M-AFT--VLKLLGLL-QSPEKGINSVLDAALAPPETSGVYFF  323 (365)
Q Consensus       284 ---~~-~-~~~--~~~~~~~~-~~p~e~A~~i~~~~l~~~~~~G~~~~  323 (365)
                         .. . ...  ...+++++ .+|+|+|+.+++++..+ .....|+.
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~i~~l~~~~-~~~~~~~t  255 (327)
T 1jtv_A          209 IHTFHRFYQYLAHSKQVFREAAQNPEEVAEVFLTALRAP-KPTLRYFT  255 (327)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCBCHHHHHHHHHHHHHCS-SCCSEEES
T ss_pred             HHHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHcCC-CCCeEEEe
Confidence               00 0 000  01233444 59999999999766543 22334554

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=100.00  E-value=4.9e-37  Score=273.69  Aligned_cols=224  Identities=13%  Similarity=0.031  Sum_probs=183.3

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      .++|+++||||++|||+++|++|+++|++|++++|+.++.+            ....++++|++|+++++++++++.+.+
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~------------~~~~~~~~D~~~~~~v~~~~~~~~~~~   72 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA------------SASVIVKMTDSFTEQADQVTAEVGKLL   72 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS------------SEEEECCCCSCHHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc------------CCcEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            46899999999999999999999999999999999976532            245778999999999999999998833


Q ss_pred             hccCCCCCeeEEEecCCccc--CC-CCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          137 LDSDMHSSIQLLINNAGILA--TS-SRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~--~~-~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                      +    .+++|+||||||+..  +. .+.+.+++++++++|+.+++.++++++|+|++   .|+||++||.++.       
T Consensus        73 ~----~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~---~g~iv~isS~~~~-------  138 (241)
T 1dhr_A           73 G----DQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE---GGLLTLAGAKAAL-------  138 (241)
T ss_dssp             T----TCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCGGGG-------
T ss_pred             C----CCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc---CCEEEEECCHHHc-------
Confidence            1    168999999999864  33 56678999999999999999999999999975   3899999999988       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  293 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  293 (365)
                                   .+.++...|++||+|++.|+++++.|++. .+.||+||+|+||+|+|++.+......         .
T Consensus       139 -------------~~~~~~~~Y~asK~a~~~~~~~la~e~~~-~~~gi~v~~v~PG~v~T~~~~~~~~~~---------~  195 (241)
T 1dhr_A          139 -------------DGTPGMIGYGMAKGAVHQLCQSLAGKNSG-MPSGAAAIAVLPVTLDTPMNRKSMPEA---------D  195 (241)
T ss_dssp             -------------SCCTTBHHHHHHHHHHHHHHHHHTSTTSS-CCTTCEEEEEEESCEECHHHHHHSTTS---------C
T ss_pred             -------------cCCCCchHHHHHHHHHHHHHHHHHHHhcc-CCCCeEEEEEecCcccCccccccCcch---------h
Confidence                         77788899999999999999999999841 147899999999999999865321100         0


Q ss_pred             hcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcc
Q 017812          294 LGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRT  329 (365)
Q Consensus       294 ~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~  329 (365)
                      ..+..+|+|+|+.+++++... ...+|+++..++|+.
T Consensus       196 ~~~~~~~~~vA~~v~~l~~~~~~~~~G~~~~v~g~~~  232 (241)
T 1dhr_A          196 FSSWTPLEFLVETFHDWITGNKRPNSGSLIQVVTTDG  232 (241)
T ss_dssp             GGGSEEHHHHHHHHHHHHTTTTCCCTTCEEEEEEETT
T ss_pred             hccCCCHHHHHHHHHHHhcCCCcCccceEEEEeCCCC
Confidence            123458999999999766432 246899988776543

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=5.8e-37  Score=272.32  Aligned_cols=224  Identities=14%  Similarity=0.042  Sum_probs=183.3

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      |++|+++||||++|||+++|++|+++|++|++++|++++.+            ....++.+|++|.++++++++++.+.+
T Consensus         1 m~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~------------~~~~~~~~D~~~~~~~~~~~~~~~~~~   68 (236)
T 1ooe_A            1 MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA------------DSNILVDGNKNWTEQEQSILEQTASSL   68 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS------------SEEEECCTTSCHHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc------------cccEEEeCCCCCHHHHHHHHHHHHHHh
Confidence            35799999999999999999999999999999999976532            245778999999999999999998843


Q ss_pred             hccCCCCCeeEEEecCCccc--CC-CCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          137 LDSDMHSSIQLLINNAGILA--TS-SRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~--~~-~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                      +    .+++|+||||||+..  +. .+.+.+++++++++|+.|++.++++++|.|++   .|+||++||.++.       
T Consensus        69 ~----~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~isS~~~~-------  134 (236)
T 1ooe_A           69 Q----GSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP---GGLLQLTGAAAAM-------  134 (236)
T ss_dssp             T----TCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCGGGG-------
T ss_pred             C----CCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc---CCEEEEECchhhc-------
Confidence            1    168999999999863  33 46678999999999999999999999999975   3899999999988       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  293 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  293 (365)
                                   .+.++...|++||+|+++|+++++.|++. .+.||+|++|+||+++|++.+......         .
T Consensus       135 -------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~~-~~~gi~v~~v~Pg~v~t~~~~~~~~~~---------~  191 (236)
T 1ooe_A          135 -------------GPTPSMIGYGMAKAAVHHLTSSLAAKDSG-LPDNSAVLTIMPVTLDTPMNRKWMPNA---------D  191 (236)
T ss_dssp             -------------SCCTTBHHHHHHHHHHHHHHHHHHSTTSS-CCTTCEEEEEEESCBCCHHHHHHSTTC---------C
T ss_pred             -------------cCCCCcHHHHHHHHHHHHHHHHHHHHhcc-cCCCeEEEEEecCcccCcchhhcCCCc---------c
Confidence                         77788999999999999999999999841 147899999999999999865321100         1


Q ss_pred             hcCCCCHHHHHHHHHHHhcCC--CCCcccEEeCCCCcc
Q 017812          294 LGLLQSPEKGINSVLDAALAP--PETSGVYFFGGKGRT  329 (365)
Q Consensus       294 ~~~~~~p~e~A~~i~~~~l~~--~~~~G~~~~~~~g~~  329 (365)
                      ..+..+|+|+|+.+++.+..+  ...+|+++..++|..
T Consensus       192 ~~~~~~~~dvA~~i~~~l~s~~~~~~~G~~~~v~gg~~  229 (236)
T 1ooe_A          192 HSSWTPLSFISEHLLKWTTETSSRPSSGALLKITTENG  229 (236)
T ss_dssp             GGGCBCHHHHHHHHHHHHHCGGGCCCTTCEEEEEEETT
T ss_pred             ccccCCHHHHHHHHHHHHcCCCcccccccEEEEecCCC
Confidence            224569999999998644333  355799998777654

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=100.00  E-value=5e-36  Score=273.93  Aligned_cols=218  Identities=22%  Similarity=0.273  Sum_probs=186.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      +++||+++||||+||||+++|++|+++|++|++++|+.++++++.+++.+.+ ..++.++.+|++|.++++++++++.+ 
T Consensus        25 ~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~v~~~~~~~~~-  102 (286)
T 1xu9_A           25 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELG-AASAHYIAGTMEDMTFAEQFVAQAGK-  102 (286)
T ss_dssp             GGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHT-CSEEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             hcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhC-CCceEEEeCCCCCHHHHHHHHHHHHH-
Confidence            4789999999999999999999999999999999999999998888887653 34789999999999999999999887 


Q ss_pred             HhccCCCCCeeEEEec-CCccc-CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINN-AGILA-TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~n-AG~~~-~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                           .++++|+|||| ||+.. +..+.+.+++++++++|+.|++.++++++|.|+++  .|+||++||.++.       
T Consensus       103 -----~~g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~--~g~iv~isS~~~~-------  168 (286)
T 1xu9_A          103 -----LMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS--NGSIVVVSSLAGK-------  168 (286)
T ss_dssp             -----HHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEEEGGGT-------
T ss_pred             -----HcCCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHC--CCEEEEECCcccc-------
Confidence                 45789999999 67653 33456889999999999999999999999999765  4899999999988       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHh--CCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNL--GLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVL  291 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~--~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~  291 (365)
                                   .+.++...|++||++++.++++++.|+  .   ..||++++|+||+|+|++........        
T Consensus       169 -------------~~~~~~~~Y~asK~a~~~~~~~l~~e~~~~---~~~i~v~~v~Pg~v~t~~~~~~~~~~--------  224 (286)
T 1xu9_A          169 -------------VAYPMVAAYSASKFALDGFFSSIRKEYSVS---RVNVSITLCVLGLIDTETAMKAVSGI--------  224 (286)
T ss_dssp             -------------SCCTTCHHHHHHHHHHHHHHHHHHHHHHHH---TCCCEEEEEEECCBCCHHHHHHSCGG--------
T ss_pred             -------------cCCCCccHHHHHHHHHHHHHHHHHHHHhhc---CCCeEEEEeecCccCChhHHHhcccc--------
Confidence                         677888999999999999999999998  5   67999999999999999864311100        


Q ss_pred             HHhcCCCCHHHHHHHHHHHhcCC
Q 017812          292 KLLGLLQSPEKGINSVLDAALAP  314 (365)
Q Consensus       292 ~~~~~~~~p~e~A~~i~~~~l~~  314 (365)
                       ......+|+++|+.+++++..+
T Consensus       225 -~~~~~~~~~~vA~~i~~~~~~~  246 (286)
T 1xu9_A          225 -VHMQAAPKEECALEIIKGGALR  246 (286)
T ss_dssp             -GGGGCBCHHHHHHHHHHHHHTT
T ss_pred             -ccCCCCCHHHHHHHHHHHHhcC
Confidence             0113569999999999866543

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=4e-36  Score=267.44  Aligned_cols=227  Identities=21%  Similarity=0.259  Sum_probs=188.0

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhc
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  138 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~  138 (365)
                      +|+++||||++|||+++|++|+++|++|++++|+.+ .             .++.++++|++|+++++++++++ +    
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~-------------~~~~~~~~D~~~~~~~~~~~~~~-~----   62 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G-------------EDLIYVEGDVTREEDVRRAVARA-Q----   62 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S-------------SSSEEEECCTTCHHHHHHHHHHH-H----
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c-------------cceEEEeCCCCCHHHHHHHHHHH-H----
Confidence            689999999999999999999999999999999865 1             24588999999999999999998 5    


Q ss_pred             cCCCCCeeEEEecCCcccC--CCCC----CHHHHhHhHHHHhHHHHHHHHHHhHhhhcCC-----CCCeEEEEcCCcccc
Q 017812          139 SDMHSSIQLLINNAGILAT--SSRL----TPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP-----VPSRIVNVTSFTHRN  207 (365)
Q Consensus       139 ~~~~~~id~lv~nAG~~~~--~~~~----~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~-----~~g~iV~vsS~~~~~  207 (365)
                        .++++|++|||||+...  ..+.    +.+++++.+++|+.+++.++++++|.|.+++     ..++||++||..+. 
T Consensus        63 --~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~-  139 (242)
T 1uay_A           63 --EEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAF-  139 (242)
T ss_dssp             --HHSCEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHH-
T ss_pred             --hhCCceEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhc-
Confidence              34789999999998643  2232    3459999999999999999999999998753     13599999999987 


Q ss_pred             cccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHH
Q 017812          208 VFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMA  287 (365)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~  287 (365)
                                         .+.++...|++||++++.++++++.|++   +.||++++|+||+|.|++....+.... ..
T Consensus       140 -------------------~~~~~~~~Y~~sK~a~~~~~~~l~~e~~---~~gi~v~~v~Pg~v~t~~~~~~~~~~~-~~  196 (242)
T 1uay_A          140 -------------------EGQIGQAAYAASKGGVVALTLPAARELA---GWGIRVVTVAPGLFDTPLLQGLPEKAK-AS  196 (242)
T ss_dssp             -------------------HCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSCSSHHHHTSCHHHH-HH
T ss_pred             -------------------cCCCCCchhhHHHHHHHHHHHHHHHHHh---hcCcEEEEEEeccCcchhhhccchhHH-HH
Confidence                               6677889999999999999999999997   789999999999999999766543211 11


Q ss_pred             HHHHHHh-cCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcccc
Q 017812          288 FTVLKLL-GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  331 (365)
Q Consensus       288 ~~~~~~~-~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~~  331 (365)
                      .....|+ +++.+|+|+|+.+++++.. +..+|+.+..++|..+.
T Consensus       197 ~~~~~~~~~~~~~~~dva~~~~~l~~~-~~~~G~~~~v~gG~~~~  240 (242)
T 1uay_A          197 LAAQVPFPPRLGRPEEYAALVLHILEN-PMLNGEVVRLDGALRMA  240 (242)
T ss_dssp             HHTTCCSSCSCCCHHHHHHHHHHHHHC-TTCCSCEEEESTTCCCC
T ss_pred             HHhhCCCcccCCCHHHHHHHHHHHhcC-CCCCCcEEEEcCCeecC
Confidence            1112344 6788999999999976655 67789999999987653

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=100.00  E-value=1.8e-37  Score=277.10  Aligned_cols=220  Identities=18%  Similarity=0.184  Sum_probs=155.0

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      +++|++|||||++|||+++|++|++ |++|++++|+.++++++.+       ..++.++.+|+++.++. +.+.+..+  
T Consensus         3 l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~-------~~~~~~~~~D~~~~~~~-~~~~~~~~--   71 (245)
T 3e9n_A            3 LKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE-------IEGVEPIESDIVKEVLE-EGGVDKLK--   71 (245)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT-------STTEEEEECCHHHHHHT-SSSCGGGT--
T ss_pred             CCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh-------hcCCcceecccchHHHH-HHHHHHHH--
Confidence            6799999999999999999999998 9999999999887765543       13588999999987663 33332222  


Q ss_pred             hccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017812          137 LDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  214 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~  214 (365)
                          .++++|+||||||+..  +..+.+.+++++++++|+.|+++++++++|.|++++  |+||++||.++.        
T Consensus        72 ----~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--g~iv~isS~~~~--------  137 (245)
T 3e9n_A           72 ----NLDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS--GCVIYINSGAGN--------  137 (245)
T ss_dssp             ----TCSCCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEC-------------
T ss_pred             ----hcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC--CeEEEEcCcccc--------
Confidence                5689999999999874  344678899999999999999999999999998764  899999999988        


Q ss_pred             CccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHh
Q 017812          215 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLL  294 (365)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  294 (365)
                                  .+.++...|++||+|++.|+++++.|++   +.||+|++|+||+|.|++.+.......     ...+.
T Consensus       138 ------------~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gi~v~~v~PG~v~t~~~~~~~~~~~-----~~~~~  197 (245)
T 3e9n_A          138 ------------GPHPGNTIYAASKHALRGLADAFRKEEA---NNGIRVSTVSPGPTNTPMLQGLMDSQG-----TNFRP  197 (245)
T ss_dssp             -----------------CHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEECCC---------------------CC
T ss_pred             ------------cCCCCchHHHHHHHHHHHHHHHHHHHhh---hcCeEEEEEecCCccCchhhhhhhhhh-----ccccc
Confidence                        7788899999999999999999999998   789999999999999999876533211     11233


Q ss_pred             cCCCCHHHHHHHHHHHhcCCCCCcccEEe
Q 017812          295 GLLQSPEKGINSVLDAALAPPETSGVYFF  323 (365)
Q Consensus       295 ~~~~~p~e~A~~i~~~~l~~~~~~G~~~~  323 (365)
                      +++.+|+|+|+++++++.  ....|..+.
T Consensus       198 ~~~~~p~dvA~~i~~l~~--~~~~~~~~~  224 (245)
T 3e9n_A          198 EIYIEPKEIANAIRFVID--AGETTQITN  224 (245)
T ss_dssp             GGGSCHHHHHHHHHHHHT--SCTTEEEEE
T ss_pred             ccCCCHHHHHHHHHHHHc--CCCccceee
Confidence            467899999999996553  333455543

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=100.00  E-value=9.7e-36  Score=269.81  Aligned_cols=235  Identities=26%  Similarity=0.386  Sum_probs=187.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHH-CCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSR-EGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~-~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      ++|++|||||++|||+++|++|++ +|++|++++|+.+++++..+++...  +.++.++.+|++|.++++++++++.+  
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~--   78 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE--GLSPRFHQLDIDDLQSIRALRDFLRK--   78 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHT--TCCCEEEECCTTCHHHHHHHHHHHHH--
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhc--CCeeEEEECCCCCHHHHHHHHHHHHH--
Confidence            589999999999999999999999 9999999999999888888888765  45788999999999999999999988  


Q ss_pred             hccCCCCCeeEEEecCCcccCC-CCCC-HHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc---
Q 017812          137 LDSDMHSSIQLLINNAGILATS-SRLT-PEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA---  211 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~~~-~~~~-~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~---  211 (365)
                          .++++|+||||||+.... ...+ .+++++++++|+.|+++++++++|.|++   .|+||++||.++......   
T Consensus        79 ----~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~~sS~~~~~~~~~~~~  151 (276)
T 1wma_A           79 ----EYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP---QGRVVNVSSIMSVRALKSCSP  151 (276)
T ss_dssp             ----HHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEECCHHHHHHHHTSCH
T ss_pred             ----hcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCC---CCEEEEECChhhhcccccCCh
Confidence                457899999999986432 2333 5889999999999999999999999875   379999999887632110   


Q ss_pred             ---------cCCCccccc----------cccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCC----CCeEEEEecC
Q 017812          212 ---------QVNNETITG----------KFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKS----RHVSVIAADP  268 (365)
Q Consensus       212 ---------~~~~~~~~~----------~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~----~gi~v~~v~P  268 (365)
                               .+..+++..          .......+.+ ...|++||++++.|++.+++++.   .    .||+|++|+|
T Consensus       152 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~sK~a~~~~~~~la~~~~---~~~~~~~i~v~~v~P  227 (276)
T 1wma_A          152 ELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWP-SSAYGVTKIGVTVLSRIHARKLS---EQRKGDKILLNACCP  227 (276)
T ss_dssp             HHHHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCC-SCHHHHHHHHHHHHHHHHHHHHH---HHCTTSCCEEEEEEC
T ss_pred             hHHhhccccccchhhhhhhhhhhhhhhcccccccCCCc-cchhHHHHHHHHHHHHHHHHHhh---cccCCCceEEEEecC
Confidence                     000000000          0000001122 37899999999999999999996   4    6999999999


Q ss_pred             CcccCCccccchhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhcCCC---CCcccEEe
Q 017812          269 GVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFF  323 (365)
Q Consensus       269 G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~A~~i~~~~l~~~---~~~G~~~~  323 (365)
                      |+|.|++.+.                .++.+|+|+|+.+++++..++   ..+|+++.
T Consensus       228 G~v~t~~~~~----------------~~~~~~~~~a~~~~~l~~~~~~~~~~~G~~~~  269 (276)
T 1wma_A          228 GWVRTDMAGP----------------KATKSPEEGAETPVYLALLPPDAEGPHGQFVS  269 (276)
T ss_dssp             CSBCSTTTCT----------------TCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEE
T ss_pred             CccccCcCCc----------------cccCChhHhhhhHhhhhcCcccccccCceEec
Confidence            9999999764                145799999999998776442   56899987

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=100.00  E-value=5.9e-36  Score=269.05  Aligned_cols=237  Identities=16%  Similarity=0.148  Sum_probs=169.5

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhcc
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  139 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~  139 (365)
                      |+++||||++|||+++|++|+++|++|++++|+.++++.              . +++|++|.++++++++++       
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~--------------~-~~~Dl~~~~~v~~~~~~~-------   59 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA--------------D-LSTAEGRKQAIADVLAKC-------   59 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC--------------C-TTSHHHHHHHHHHHHTTC-------
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc--------------c-cccCCCCHHHHHHHHHHh-------
Confidence            689999999999999999999999999999998764321              1 678999999988877632       


Q ss_pred             CCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcc-c
Q 017812          140 DMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNET-I  218 (365)
Q Consensus       140 ~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~-~  218 (365)
                        .+++|+||||||+..+.     +.+++++++|+.|+++++++++|.|++++ .|+||++||.++............ .
T Consensus        60 --~~~id~lv~~Ag~~~~~-----~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~~~~~~  131 (257)
T 1fjh_A           60 --SKGMDGLVLCAGLGPQT-----KVLGNVVSVNYFGATELMDAFLPALKKGH-QPAAVVISSVASAHLAFDKNPLALAL  131 (257)
T ss_dssp             --TTCCSEEEECCCCCTTC-----SSHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGSSCGGGCTTHHHH
T ss_pred             --CCCCCEEEECCCCCCCc-----ccHHHHHHHhhHHHHHHHHHHHHHHhhcC-CcEEEEECChhhhccccccchhhhhh
Confidence              27899999999986421     23899999999999999999999998875 689999999988732111100000 0


Q ss_pred             ccccc-------ccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc-hhHHHHHHHHH
Q 017812          219 TGKFF-------LRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV-PSFLSLMAFTV  290 (365)
Q Consensus       219 ~~~~~-------~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~-~~~~~~~~~~~  290 (365)
                      .....       ....+.++...|++||+|++.++++++.|+.   ++||+|++|+||+|.|++.+.. ..... .....
T Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~v~PG~v~t~~~~~~~~~~~~-~~~~~  207 (257)
T 1fjh_A          132 EAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWG---EAGVRLNTIAPGATETPLLQAGLQDPRY-GESIA  207 (257)
T ss_dssp             HHTCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHH---HTTCEEEEEEECC---------------------
T ss_pred             cccchhhhhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHh---hcCeEEEEEeeCCCCCccchhhccchhH-HHHHH
Confidence            00000       0003456789999999999999999999997   7899999999999999997654 21110 01111


Q ss_pred             --HHHhcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017812          291 --LKLLGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  330 (365)
Q Consensus       291 --~~~~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~  330 (365)
                        ..|++++.+|+|+|+.+++++... ...+|+++..++|...
T Consensus       208 ~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~tG~~~~vdgG~~~  250 (257)
T 1fjh_A          208 KFVPPMGRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGGIDA  250 (257)
T ss_dssp             -CCCSTTSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTTHHH
T ss_pred             hcccccCCCCCHHHHHHHHHHHhCchhcCCcCCEEEECCCccc
Confidence              235567899999999999655332 2568999999998654

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=100.00  E-value=7e-33  Score=297.15  Aligned_cols=236  Identities=19%  Similarity=0.158  Sum_probs=188.1

Q ss_pred             CCCCCEEEEecCCCh-HHHHHHHHHHHCCCEEEEE-ecCchhHHHHHHHHHhhcC--CCceEEEEecCCChhhHHHHHHH
Q 017812           56 GIKRPVCIVTGATSG-LGAAAAYALSREGFHVVLV-GRSSHLLSETMADITSRNK--DARLEAFQVDLSSFQSVLKFKDS  131 (365)
Q Consensus        56 ~~~~k~vlITGassG-IG~~~a~~la~~G~~Vil~-~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dls~~~~v~~~~~~  131 (365)
                      +++||++|||||++| ||+++|++|+++|++|+++ +|+.++++++.+++.+..+  +.++.++.+|++|.+++++++++
T Consensus       672 ~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~  751 (1887)
T 2uv8_A          672 TFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEF  751 (1887)
T ss_dssp             CCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHH
Confidence            578999999999998 9999999999999999998 6888888888777755432  45789999999999999999999


Q ss_pred             HHHHHhccCC-----CC-CeeEEEecCCccc---CCCCCC--HHHHhHhHHHHhHHHHHHHHHH--hHhhhcCCCCCeEE
Q 017812          132 LQQWLLDSDM-----HS-SIQLLINNAGILA---TSSRLT--PEGYDQMMSTNYIGAFFLTKLL--LPLLKNSPVPSRIV  198 (365)
Q Consensus       132 ~~~~~~~~~~-----~~-~id~lv~nAG~~~---~~~~~~--~~~~~~~~~vN~~~~~~l~~~~--l~~~~~~~~~g~iV  198 (365)
                      +.+      .     ++ +||+||||||+..   +..+.+  .++|+++|++|+.|++.+++.+  +|.|.+++ .|+||
T Consensus       752 i~~------~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~-~G~IV  824 (1887)
T 2uv8_A          752 IYD------TEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRP-AQVIL  824 (1887)
T ss_dssp             HHS------CTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCC-EEEEE
T ss_pred             HHH------hccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCC-CCEEE
Confidence            886      4     45 8999999999863   345667  8999999999999999999998  78887765 68999


Q ss_pred             EEcCCcccccccccCCCccccccccccCCCCChhhhhhhhHHHHHHH-HHHHHHHhCCCCCCCeEEEEecCCccc-CCcc
Q 017812          199 NVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIF-SYELHRNLGLDKSRHVSVIAADPGVVK-TNIM  276 (365)
Q Consensus       199 ~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~-~~~la~e~~~~~~~gi~v~~v~PG~v~-T~~~  276 (365)
                      ++||.++.                    .+  +...|++||+|+++| ++.++.+++   +. |+||+|+||+|+ |+|.
T Consensus       825 nISS~ag~--------------------~g--g~~aYaASKAAL~~Lttr~lA~ela---~~-IrVNaV~PG~V~tT~m~  878 (1887)
T 2uv8_A          825 PMSPNHGT--------------------FG--GDGMYSESKLSLETLFNRWHSESWA---NQ-LTVCGAIIGWTRGTGLM  878 (1887)
T ss_dssp             EECSCTTC--------------------SS--CBTTHHHHHHHGGGHHHHHHHSSCT---TT-EEEEEEEECCEECC---
T ss_pred             EEcChHhc--------------------cC--CCchHHHHHHHHHHHHHHHHHHHhC---CC-eEEEEEEeccccccccc
Confidence            99999887                    44  567899999999999 999999987   55 999999999999 8987


Q ss_pred             ccchhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhcCCCC----CcccEEeC--CCCccc
Q 017812          277 REVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPE----TSGVYFFG--GKGRTV  330 (365)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~p~e~A~~i~~~~l~~~~----~~G~~~~~--~~g~~~  330 (365)
                      .........   ....++ +..+|+|+|..++  +|.++.    .+|+.+..  ++|...
T Consensus       879 ~~~~~~~~~---~~~~pl-r~~sPEEVA~avl--fLaSd~~as~iTGq~I~VDVDGG~~~  932 (1887)
T 2uv8_A          879 SANNIIAEG---IEKMGV-RTFSQKEMAFNLL--GLLTPEVVELCQKSPVMADLNGGLQF  932 (1887)
T ss_dssp             --CCTTHHH---HHTTSC-CCEEHHHHHHHHH--GGGSHHHHHHHHHSCEEEEESCSTTT
T ss_pred             ccchhHHHH---HHhcCC-CCCCHHHHHHHHH--HHhCCCccccccCcEEEEECCCCeec
Confidence            542111111   111122 5569999999999  666654    36887765  477554

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2e-33  Score=292.20  Aligned_cols=236  Identities=19%  Similarity=0.158  Sum_probs=188.4

Q ss_pred             CCCCCEEEEecCCCh-HHHHHHHHHHHCCCEEEEE-ecCchhHHHHHHHHHhhcC--CCceEEEEecCCChhhHHHHHHH
Q 017812           56 GIKRPVCIVTGATSG-LGAAAAYALSREGFHVVLV-GRSSHLLSETMADITSRNK--DARLEAFQVDLSSFQSVLKFKDS  131 (365)
Q Consensus        56 ~~~~k~vlITGassG-IG~~~a~~la~~G~~Vil~-~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dls~~~~v~~~~~~  131 (365)
                      +++||++|||||++| ||+++|++|+++|++|+++ +|+.++++++.+++.+..+  +.++.++++|++|.+++++++++
T Consensus       473 sL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe~  552 (1688)
T 2pff_A          473 TFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEF  552 (1688)
T ss_dssp             CCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHHH
T ss_pred             ccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHHH
Confidence            478999999999998 9999999999999999998 6887777777777754432  45789999999999999999999


Q ss_pred             HHHHHhccCC-----CC-CeeEEEecCCccc---CCCCCC--HHHHhHhHHHHhHHHHHHHHHH--hHhhhcCCCCCeEE
Q 017812          132 LQQWLLDSDM-----HS-SIQLLINNAGILA---TSSRLT--PEGYDQMMSTNYIGAFFLTKLL--LPLLKNSPVPSRIV  198 (365)
Q Consensus       132 ~~~~~~~~~~-----~~-~id~lv~nAG~~~---~~~~~~--~~~~~~~~~vN~~~~~~l~~~~--l~~~~~~~~~g~iV  198 (365)
                      +.+      .     ++ +||+||||||+..   +..+.+  .++|++++++|+.|++.+++.+  +|.|++++ .|+||
T Consensus       553 I~e------~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krg-gGrIV  625 (1688)
T 2pff_A          553 IYD------TEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRP-AQVIL  625 (1688)
T ss_dssp             HHS------CTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSC-EEECC
T ss_pred             HHH------hccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCC-CCEEE
Confidence            886      5     56 8999999999863   345667  8999999999999999999999  88888765 58999


Q ss_pred             EEcCCcccccccccCCCccccccccccCCCCChhhhhhhhHHHHHHH-HHHHHHHhCCCCCCCeEEEEecCCccc-CCcc
Q 017812          199 NVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIF-SYELHRNLGLDKSRHVSVIAADPGVVK-TNIM  276 (365)
Q Consensus       199 ~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~-~~~la~e~~~~~~~gi~v~~v~PG~v~-T~~~  276 (365)
                      ++||.++.                    .+  +..+|++||+|+++| ++.++.+++   +. |+||+|+||+|+ |+|.
T Consensus       626 nISSiAG~--------------------~G--g~saYaASKAAL~aLttrsLAeEla---~~-IRVNaVaPG~V~TT~M~  679 (1688)
T 2pff_A          626 PMSPNHGT--------------------FG--GDGMYSESKLSLETLFNRWHSESWA---NQ-LTVCGAIIGWTRGTGLM  679 (1688)
T ss_dssp             CCCSCTTT--------------------SS--CBTTHHHHHHHHTHHHHHTTTSSCT---TT-EECCCCCCCCCCCCSSS
T ss_pred             EEEChHhc--------------------cC--CchHHHHHHHHHHHHHHHHHHHHcC---CC-eEEEEEEECcCcCCccc
Confidence            99999887                    43  567899999999999 788888886   44 999999999999 7886


Q ss_pred             ccchhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhcCCCC----CcccEEeCC--CCccc
Q 017812          277 REVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPE----TSGVYFFGG--KGRTV  330 (365)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~p~e~A~~i~~~~l~~~~----~~G~~~~~~--~g~~~  330 (365)
                      .........   ....++ +..+|+|+|+.++  ++.++.    .+|+.+..+  +|...
T Consensus       680 ~~~e~~~~~---l~~ipl-R~~sPEEVA~aIl--FLaSd~sAs~ITGq~I~VDVDGG~~~  733 (1688)
T 2pff_A          680 SANNIIAEG---IEKMGV-RTFSQKEMAFNLL--GLLTPEVVELCQKSPVMADLNGGLQF  733 (1688)
T ss_dssp             CTTTTCSTT---TSSSSC-CCCCCCTTHHHHH--HHTSTTHHHHHTTSCCCCCCSCSGGG
T ss_pred             CCchHHHHH---HHhCCC-CCCCHHHHHHHHH--HHhCCCccccccCcEEEEEcCCCeee
Confidence            531110000   000122 4559999999999  555554    368887654  67554

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.97  E-value=1.2e-31  Score=232.17  Aligned_cols=195  Identities=17%  Similarity=0.189  Sum_probs=164.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhccC
Q 017812           61 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  140 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~~  140 (365)
                      +++||||+||||++++++|+ +|++|++++|+.+                   .+.+|++|+++++++++++        
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-------------------~~~~D~~~~~~~~~~~~~~--------   56 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-------------------DVTVDITNIDSIKKMYEQV--------   56 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-------------------SEECCTTCHHHHHHHHHHH--------
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-------------------ceeeecCCHHHHHHHHHHh--------
Confidence            79999999999999999999 9999999999864                   4789999999998887653        


Q ss_pred             CCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCccc
Q 017812          141 MHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETI  218 (365)
Q Consensus       141 ~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~~  218 (365)
                        +++|+||||||...  +..+.+.+++++.+++|+.+++.+++++.|.|.+   .++||++||..+.            
T Consensus        57 --~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~iv~~sS~~~~------------  119 (202)
T 3d7l_A           57 --GKVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLND---KGSFTLTTGIMME------------  119 (202)
T ss_dssp             --CCEEEEEECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEE---EEEEEEECCGGGT------------
T ss_pred             --CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhcc---CCEEEEEcchhhc------------
Confidence              57999999999763  3456788999999999999999999999999865   3899999999887            


Q ss_pred             cccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhcCCC
Q 017812          219 TGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQ  298 (365)
Q Consensus       219 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  298 (365)
                              .+.++...|++||++++.++++++.|+    +.||++++++||++.|++.....          ..+..++.
T Consensus       120 --------~~~~~~~~Y~~sK~~~~~~~~~~~~e~----~~gi~v~~v~pg~v~~~~~~~~~----------~~~~~~~~  177 (202)
T 3d7l_A          120 --------DPIVQGASAAMANGAVTAFAKSAAIEM----PRGIRINTVSPNVLEESWDKLEP----------FFEGFLPV  177 (202)
T ss_dssp             --------SCCTTCHHHHHHHHHHHHHHHHHTTSC----STTCEEEEEEECCBGGGHHHHGG----------GSTTCCCB
T ss_pred             --------CCCCccHHHHHHHHHHHHHHHHHHHHc----cCCeEEEEEecCccCCchhhhhh----------hccccCCC
Confidence                    677888999999999999999999887    36999999999999998743110          01234677


Q ss_pred             CHHHHHHHHHHHhcCCCCCcccEEeC
Q 017812          299 SPEKGINSVLDAALAPPETSGVYFFG  324 (365)
Q Consensus       299 ~p~e~A~~i~~~~l~~~~~~G~~~~~  324 (365)
                      +|+|+|+.++.++  ....+|+.|..
T Consensus       178 ~~~dva~~~~~~~--~~~~~G~~~~v  201 (202)
T 3d7l_A          178 PAAKVARAFEKSV--FGAQTGESYQV  201 (202)
T ss_dssp             CHHHHHHHHHHHH--HSCCCSCEEEE
T ss_pred             CHHHHHHHHHHhh--hccccCceEec
Confidence            9999999998655  44567777654

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.97  E-value=1.6e-32  Score=245.91  Aligned_cols=239  Identities=19%  Similarity=0.144  Sum_probs=175.9

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhcc
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  139 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~  139 (365)
                      |+++||||+||||++++++|+++|++|++++|+.++++.               .+.+|++|.++++++++++       
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---------------~~~~D~~~~~~~~~~~~~~-------   59 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA---------------DLSTPGGRETAVAAVLDRC-------   59 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC---------------CTTSHHHHHHHHHHHHHHH-------
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc---------------cccCCcccHHHHHHHHHHc-------
Confidence            589999999999999999999999999999998764210               1678999999998887743       


Q ss_pred             CCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCccc-
Q 017812          140 DMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETI-  218 (365)
Q Consensus       140 ~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~~-  218 (365)
                        .+++|+||||||+...     .+.++..+++|+.|++.++++++|.|++.+ .++||++||.+++..........+. 
T Consensus        60 --~~~~d~vi~~Ag~~~~-----~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~~~~  131 (255)
T 2dkn_A           60 --GGVLDGLVCCAGVGVT-----AANSGLVVAVNYFGVSALLDGLAEALSRGQ-QPAAVIVGSIAATQPGAAELPMVEAM  131 (255)
T ss_dssp             --TTCCSEEEECCCCCTT-----SSCHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGSTTGGGCHHHHHH
T ss_pred             --CCCccEEEECCCCCCc-----chhHHHHHHHHhHHHHHHHHHHHHHhhhcC-CceEEEEeccccccccccccchhhhh
Confidence              1579999999998542     234889999999999999999999998765 6899999999887322110000000 


Q ss_pred             -----cccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHH-
Q 017812          219 -----TGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLK-  292 (365)
Q Consensus       219 -----~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~-  292 (365)
                           ...........++...|++||++++.+++.+++++.   ..||++++++||++.|++.+............... 
T Consensus       132 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~---~~gi~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~  208 (255)
T 2dkn_A          132 LAGDEARAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWA---GRGVRLNVVAPGAVETPLLQASKADPRYGESTRRFV  208 (255)
T ss_dssp             HHTCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHH---HTTCEEEEEEECCBCSHHHHHHHHCTTTHHHHHSCC
T ss_pred             cccchhhhhhhccccCCcchhHHHHHHHHHHHHHHHHHHHh---hcCcEEEEEcCCcccchhhhhcccchhhHHHHHHHH
Confidence                 000000001125778999999999999999999987   68999999999999999865431100000111111 


Q ss_pred             -HhcCCCCHHHHHHHHHHHhcCCC-CCcccEEeCCCCcccc
Q 017812          293 -LLGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKGRTVN  331 (365)
Q Consensus       293 -~~~~~~~p~e~A~~i~~~~l~~~-~~~G~~~~~~~g~~~~  331 (365)
                       +.+++.+|+|+|+++++++.... ..+|++|..++|+...
T Consensus       209 ~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~  249 (255)
T 2dkn_A          209 APLGRGSEPREVAEAIAFLLGPQASFIHGSVLFVDGGMDAL  249 (255)
T ss_dssp             CTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTHHHH
T ss_pred             HHhcCCCCHHHHHHHHHHHhCCCcccceeeEEEecCCeEee
Confidence             45678899999999997664332 4679999999887764

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.97  E-value=2.2e-31  Score=231.26  Aligned_cols=196  Identities=21%  Similarity=0.259  Sum_probs=163.3

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhcc
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  139 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~  139 (365)
                      |+++||||+||||++++++|+++  +|++++|++++++++.+++.     .  .++.+|++|++++++++++        
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~-----~--~~~~~D~~~~~~~~~~~~~--------   63 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVG-----A--RALPADLADELEAKALLEE--------   63 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHT-----C--EECCCCTTSHHHHHHHHHH--------
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhcc-----C--cEEEeeCCCHHHHHHHHHh--------
Confidence            57999999999999999999999  99999999988877766652     1  7889999999999988876        


Q ss_pred             CCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcc
Q 017812          140 DMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNET  217 (365)
Q Consensus       140 ~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~  217 (365)
                        ++++|+||||||+..  +..+.+.+++++.+++|+.|++.+++++    .+++ .++||++||..++           
T Consensus        64 --~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~-~~~iv~~sS~~~~-----------  125 (207)
T 2yut_A           64 --AGPLDLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHA----RFQK-GARAVFFGAYPRY-----------  125 (207)
T ss_dssp             --HCSEEEEEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHC----CEEE-EEEEEEECCCHHH-----------
T ss_pred             --cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH----HhcC-CcEEEEEcChhhc-----------
Confidence              167999999999863  3346688999999999999999999998    2222 5899999999987           


Q ss_pred             ccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhcCC
Q 017812          218 ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLL  297 (365)
Q Consensus       218 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  297 (365)
                               .+.++...|++||++++.++++++.++.   +.||++++++||++.|++.....           .+.+++
T Consensus       126 ---------~~~~~~~~Y~~sK~a~~~~~~~~~~~~~---~~gi~v~~v~pg~v~t~~~~~~~-----------~~~~~~  182 (207)
T 2yut_A          126 ---------VQVPGFAAYAAAKGALEAYLEAARKELL---REGVHLVLVRLPAVATGLWAPLG-----------GPPKGA  182 (207)
T ss_dssp             ---------HSSTTBHHHHHHHHHHHHHHHHHHHHHH---TTTCEEEEECCCCBCSGGGGGGT-----------SCCTTC
T ss_pred             ---------cCCCCcchHHHHHHHHHHHHHHHHHHHh---hhCCEEEEEecCcccCCCccccC-----------CCCCCC
Confidence                     6677889999999999999999999997   78999999999999999853211           123567


Q ss_pred             CCHHHHHHHHHHHhcC
Q 017812          298 QSPEKGINSVLDAALA  313 (365)
Q Consensus       298 ~~p~e~A~~i~~~~l~  313 (365)
                      .+|+|+|+.+++++..
T Consensus       183 ~~~~dva~~~~~~~~~  198 (207)
T 2yut_A          183 LSPEEAARKVLEGLFR  198 (207)
T ss_dssp             BCHHHHHHHHHHHHC-
T ss_pred             CCHHHHHHHHHHHHhC
Confidence            8999999999965543

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.97  E-value=2e-31  Score=285.40  Aligned_cols=236  Identities=18%  Similarity=0.157  Sum_probs=186.5

Q ss_pred             CCCCCEEEEecCCCh-HHHHHHHHHHHCCCEEEEEe-cCchhHHHHHHHHHhhcC--CCceEEEEecCCChhhHHHHHHH
Q 017812           56 GIKRPVCIVTGATSG-LGAAAAYALSREGFHVVLVG-RSSHLLSETMADITSRNK--DARLEAFQVDLSSFQSVLKFKDS  131 (365)
Q Consensus        56 ~~~~k~vlITGassG-IG~~~a~~la~~G~~Vil~~-r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dls~~~~v~~~~~~  131 (365)
                      +++||+||||||++| ||+++|++|+++|++|++++ |+.+++++..+++.+...  +.++.++.||++|.+++++++++
T Consensus       649 ~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~  728 (1878)
T 2uv9_A          649 TFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNY  728 (1878)
T ss_dssp             CCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHH
Confidence            478999999999999 99999999999999999995 777777777766644322  45789999999999999999999


Q ss_pred             HHHHHhccCC---CC-CeeEEEecCCccc---CCCCCC--HHHHhHhHHHHhHHHHHHHHH--HhHhhhcCCCCCeEEEE
Q 017812          132 LQQWLLDSDM---HS-SIQLLINNAGILA---TSSRLT--PEGYDQMMSTNYIGAFFLTKL--LLPLLKNSPVPSRIVNV  200 (365)
Q Consensus       132 ~~~~~~~~~~---~~-~id~lv~nAG~~~---~~~~~~--~~~~~~~~~vN~~~~~~l~~~--~l~~~~~~~~~g~iV~v  200 (365)
                      +.+      .   ++ +||+||||||+..   +..+.+  .++|+++|++|+.|++.+++.  ++|.|.+++ .|+||++
T Consensus       729 i~~------~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~-~G~IVnI  801 (1878)
T 2uv9_A          729 IYD------TKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRP-AQVILPL  801 (1878)
T ss_dssp             HHC------SSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCC-EEECCEE
T ss_pred             HHH------hhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCC-CCEEEEE
Confidence            886      5   67 8999999999873   446777  799999999999999999987  778887764 5899999


Q ss_pred             cCCcccccccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHH-hCCCCCCCeEEEEecCCccc-CCcccc
Q 017812          201 TSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRN-LGLDKSRHVSVIAADPGVVK-TNIMRE  278 (365)
Q Consensus       201 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e-~~~~~~~gi~v~~v~PG~v~-T~~~~~  278 (365)
                      ||.++.                    .+  +...|++||+|+++|++.++.+ ++   +. |+||+|+||+++ |+|...
T Consensus       802 SS~ag~--------------------~g--g~~aYaASKAAL~aLt~~laAeEla---~~-IrVNaVaPG~V~gT~m~~~  855 (1878)
T 2uv9_A          802 SPNHGT--------------------FG--NDGLYSESKLALETLFNRWYSESWG---NY-LTICGAVIGWTRGTGLMSA  855 (1878)
T ss_dssp             CSCSSS--------------------SS--CCSSHHHHHHHHTTHHHHHHHSTTT---TT-EEEEEEEECCBCCTTSCSH
T ss_pred             cchhhc--------------------cC--CchHHHHHHHHHHHHHHHHHHHHcC---CC-eEEEEEEecceecCccccc
Confidence            999887                    33  4678999999999999877655 64   44 999999999999 999764


Q ss_pred             chhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhcCCCC----CcccEEeC--CCCccc
Q 017812          279 VPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPE----TSGVYFFG--GKGRTV  330 (365)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~p~e~A~~i~~~~l~~~~----~~G~~~~~--~~g~~~  330 (365)
                      .....   ......++ +..+|+|+|+.+++  |.++.    .+|+.+..  |+|...
T Consensus       856 ~~~~~---~~~~~~pl-r~~sPeEVA~avlf--LaSd~a~s~iTGq~I~VDVDGG~~~  907 (1878)
T 2uv9_A          856 NNLVA---EGVEKLGV-RTFSQQEMAFNLLG--LMAPAIVNLCQSDPVFADLNGGLQF  907 (1878)
T ss_dssp             HHHTH---HHHHTTTC-CCBCHHHHHHHHHH--HHSHHHHHHHTTSCEEEEESCSGGG
T ss_pred             chhhH---HHHHhcCC-CCCCHHHHHHHHHH--HhCCcccccccCcEEEEEcCCCccc
Confidence            21100   11111122 45699999999994  44443    36777765  477544

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.97  E-value=1e-30  Score=256.83  Aligned_cols=215  Identities=14%  Similarity=0.103  Sum_probs=174.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCE-EEEE-ecC-------------chhHHHHHHHHHhhcCCCceEEEEecCCCh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFH-VVLV-GRS-------------SHLLSETMADITSRNKDARLEAFQVDLSSF  122 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~-Vil~-~r~-------------~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~  122 (365)
                      .++++|||||++|||+++|++|+++|++ |+++ +|+             .+.++++.+++.+.  +.++.++.||++|.
T Consensus       250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~--g~~v~~~~~Dvtd~  327 (525)
T 3qp9_A          250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADL--GATATVVTCDLTDA  327 (525)
T ss_dssp             TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHH--TCEEEEEECCTTSH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhc--CCEEEEEECCCCCH
Confidence            5899999999999999999999999996 8888 898             35667777888776  56899999999999


Q ss_pred             hhHHHHHHHHHHHHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEE
Q 017812          123 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNV  200 (365)
Q Consensus       123 ~~v~~~~~~~~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~v  200 (365)
                      ++++++++++.       .+++||+||||||+..  +..+.+.+++++++++|+.|++++.+.+.|.+++++..++||++
T Consensus       328 ~~v~~~~~~i~-------~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~  400 (525)
T 3qp9_A          328 EAAARLLAGVS-------DAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLF  400 (525)
T ss_dssp             HHHHHHHHTSC-------TTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEE
T ss_pred             HHHHHHHHHHH-------hcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEE
Confidence            99999998775       2578999999999974  45678999999999999999999999999999776435899999


Q ss_pred             cCCcccccccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccch
Q 017812          201 TSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP  280 (365)
Q Consensus       201 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~  280 (365)
                      ||.++.                    .+.+++..|++||+++++|+    ++++   ..||++++|+||+++|+|.....
T Consensus       401 SS~a~~--------------------~g~~g~~~YaaaKa~l~~lA----~~~~---~~gi~v~sI~pG~~~tgm~~~~~  453 (525)
T 3qp9_A          401 SSVAAI--------------------WGGAGQGAYAAGTAFLDALA----GQHR---ADGPTVTSVAWSPWEGSRVTEGA  453 (525)
T ss_dssp             EEGGGT--------------------TCCTTCHHHHHHHHHHHHHH----TSCC---SSCCEEEEEEECCBTTSGGGSSH
T ss_pred             CCHHHc--------------------CCCCCCHHHHHHHHHHHHHH----HHHH---hCCCCEEEEECCccccccccchh
Confidence            999998                    78899999999999998875    4555   68999999999999999985422


Q ss_pred             hHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhcC
Q 017812          281 SFLSLMAFTVLKLLGLLQSPEKGINSVLDAALA  313 (365)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~p~e~A~~i~~~~l~  313 (365)
                      ... ..   . .......+|+++++.+.+++..
T Consensus       454 ~~~-~~---~-~~g~~~l~pee~a~~l~~~l~~  481 (525)
T 3qp9_A          454 TGE-RL---R-RLGLRPLAPATALTALDTALGH  481 (525)
T ss_dssp             HHH-HH---H-HTTBCCBCHHHHHHHHHHHHHH
T ss_pred             hHH-HH---H-hcCCCCCCHHHHHHHHHHHHhC
Confidence            111 11   1 1111456999999999976644

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.96  E-value=1.9e-29  Score=245.15  Aligned_cols=211  Identities=19%  Similarity=0.172  Sum_probs=169.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCc---hhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSS---HLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~---~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      ++++|||||++|||+++|++|+++|+ +|++++|+.   +..+++.+++.+.  +.++.++.||++|.++++++++++.+
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~--g~~v~~~~~Dvtd~~~v~~~~~~i~~  316 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQL--GVRVTIAACDAADREALAALLAELPE  316 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHTCCT
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            58999999999999999999999999 899999974   4567777777765  56899999999999999999988764


Q ss_pred             HHhccCCCCCeeEEEecCCcc---cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017812          135 WLLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  211 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~---~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~  211 (365)
                            . +++|+||||||+.   .+..+.+.+++++++++|+.|++++.+.+.+.+     .++||++||.++.     
T Consensus       317 ------~-g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~-----~~~iV~~SS~a~~-----  379 (496)
T 3mje_A          317 ------D-APLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLD-----LDAFVLFSSGAAV-----  379 (496)
T ss_dssp             ------T-SCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSC-----CSEEEEEEEHHHH-----
T ss_pred             ------h-CCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccC-----CCEEEEEeChHhc-----
Confidence                  3 6899999999987   345678999999999999999999999887663     4799999999998     


Q ss_pred             cCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHH
Q 017812          212 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVL  291 (365)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~  291 (365)
                                     .+.+++..|++||++++.|++.++       ..||++++|+||++.|+.+.........+..   
T Consensus       380 ---------------~g~~g~~~YaAaKa~ldala~~~~-------~~Gi~v~sV~pG~w~~~gm~~~~~~~~~l~~---  434 (496)
T 3mje_A          380 ---------------WGSGGQPGYAAANAYLDALAEHRR-------SLGLTASSVAWGTWGEVGMATDPEVHDRLVR---  434 (496)
T ss_dssp             ---------------TTCTTCHHHHHHHHHHHHHHHHHH-------HTTCCCEEEEECEESSSCC------CHHHHH---
T ss_pred             ---------------CCCCCcHHHHHHHHHHHHHHHHHH-------hcCCeEEEEECCcccCCccccChHHHHHHHh---
Confidence                           788899999999999999887654       4699999999999876554322111111111   


Q ss_pred             HHhcCCCCHHHHHHHHHHHhcCC
Q 017812          292 KLLGLLQSPEKGINSVLDAALAP  314 (365)
Q Consensus       292 ~~~~~~~~p~e~A~~i~~~~l~~  314 (365)
                      ..+ ...+|+++++.+.+++...
T Consensus       435 ~g~-~~l~pe~~~~~l~~~l~~~  456 (496)
T 3mje_A          435 QGV-LAMEPEHALGALDQMLEND  456 (496)
T ss_dssp             TTE-EEECHHHHHHHHHHHHHHT
T ss_pred             cCC-CCCCHHHHHHHHHHHHcCC
Confidence            111 2359999999988755443

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.95  E-value=2.6e-28  Score=250.45  Aligned_cols=211  Identities=24%  Similarity=0.225  Sum_probs=170.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHH-HCCC-EEEEEecC---chhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALS-REGF-HVVLVGRS---SHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  132 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la-~~G~-~Vil~~r~---~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~  132 (365)
                      .+++++||||++|||+++|++|+ ++|+ +|++++|+   .++++++.+++++.  +.++++++||++|.++++++++++
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~--G~~v~~~~~Dvsd~~~v~~~~~~~  606 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAY--GAEVSLQACDVADRETLAKVLASI  606 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHTS
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhc--CCcEEEEEeecCCHHHHHHHHHHH
Confidence            58999999999999999999999 7999 69999999   55677888888766  678999999999999999999987


Q ss_pred             HHHHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc
Q 017812          133 QQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN  210 (365)
Q Consensus       133 ~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~  210 (365)
                      .+      .+ +||+||||||+..  +..+++.++|++++++|+.|++++++++.|.|       +||++||.++.    
T Consensus       607 ~~------~~-~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l-------~iV~~SS~ag~----  668 (795)
T 3slk_A          607 PD------EH-PLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDPDV-------ALVLFSSVSGV----  668 (795)
T ss_dssp             CT------TS-CEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS-------EEEEEEETHHH----
T ss_pred             HH------hC-CCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC-------EEEEEccHHhc----
Confidence            65      44 8999999999974  45688999999999999999999999998776       89999999998    


Q ss_pred             ccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHH
Q 017812          211 AQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTV  290 (365)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~  290 (365)
                                      .+.+++..|++||+    |+++|+++++   ..||++++|+||++.|+++......... ....
T Consensus       669 ----------------~g~~g~~~YaAaka----~~~alA~~~~---~~Gi~v~sI~pG~v~t~g~~~~~~~~~~-~~~~  724 (795)
T 3slk_A          669 ----------------LGSGGQGNYAAANS----FLDALAQQRQ---SRGLPTRSLAWGPWAEHGMASTLREAEQ-DRLA  724 (795)
T ss_dssp             ----------------HTCSSCHHHHHHHH----HHHHHHHHHH---HTTCCEEEEEECCCSCCCHHHHHHHHHH-HHHH
T ss_pred             ----------------CCCCCCHHHHHHHH----HHHHHHHHHH---HcCCeEEEEECCeECcchhhccccHHHH-HHHH
Confidence                            88899999999996    5555666665   6899999999999998865432111111 1111


Q ss_pred             HHHhcCCCCHHHHHHHHHHHhcC
Q 017812          291 LKLLGLLQSPEKGINSVLDAALA  313 (365)
Q Consensus       291 ~~~~~~~~~p~e~A~~i~~~~l~  313 (365)
                      ...+ ...+++|+...+..++..
T Consensus       725 ~~g~-~~l~~~e~~~~~~~~l~~  746 (795)
T 3slk_A          725 RSGL-LPISTEEGLSQFDAACGG  746 (795)
T ss_dssp             HTTB-CCCCHHHHHHHHHHHHTS
T ss_pred             hcCC-CCCCHHHHHHHHHHHHhC
Confidence            1122 345888888887754433

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.95  E-value=1e-27  Score=268.71  Aligned_cols=225  Identities=16%  Similarity=0.092  Sum_probs=167.9

Q ss_pred             CCCCCEEEEecCCCh-HHHHHHHHHHHCCCEEEEEecCchh-----HHHHHHHHHhhcCCCceEEEEecCCChhhHHHHH
Q 017812           56 GIKRPVCIVTGATSG-LGAAAAYALSREGFHVVLVGRSSHL-----LSETMADITSRNKDARLEAFQVDLSSFQSVLKFK  129 (365)
Q Consensus        56 ~~~~k~vlITGassG-IG~~~a~~la~~G~~Vil~~r~~~~-----~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~  129 (365)
                      .++||++|||||++| ||+++|+.|++.|++|++++|+.++     ++++.+++...  +.++..+++|++|.+++++++
T Consensus      2133 ~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~--G~~~~~v~~Dvtd~~~v~~lv 2210 (3089)
T 3zen_D         2133 XXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARF--DATLWVVPANMASYSDIDKLV 2210 (3089)
T ss_dssp             CCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCT--TCEEEEEECCTTCHHHHHHHH
T ss_pred             cCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhc--CCeEEEEEecCCCHHHHHHHH
Confidence            378999999999999 9999999999999999999999876     55666665443  457889999999999999999


Q ss_pred             HHHHHHHhccCCCCCeeEEEecCCcc-------cCCCCCCHHHHhHh----HHHHhHHHHHHHHHHhHhhhcCCCC---C
Q 017812          130 DSLQQWLLDSDMHSSIQLLINNAGIL-------ATSSRLTPEGYDQM----MSTNYIGAFFLTKLLLPLLKNSPVP---S  195 (365)
Q Consensus       130 ~~~~~~~~~~~~~~~id~lv~nAG~~-------~~~~~~~~~~~~~~----~~vN~~~~~~l~~~~l~~~~~~~~~---g  195 (365)
                      +++.+...  ..+|+||+||||||+.       ....+.+.++|+..    +++|+.+++.+++.+.|.|.+++..   +
T Consensus      2211 ~~i~~~~~--~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ 2288 (3089)
T 3zen_D         2211 EWVGTEQT--ESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLH 2288 (3089)
T ss_dssp             HHHTSCCE--EEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEE
T ss_pred             HHHHhhhh--hhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeE
Confidence            98865110  0358999999999982       12223344555544    9999999999999999999876521   1


Q ss_pred             eEEEEcCCcccccccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHH--hCCCCCCCeEEEEecCCccc-
Q 017812          196 RIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRN--LGLDKSRHVSVIAADPGVVK-  272 (365)
Q Consensus       196 ~iV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e--~~~~~~~gi~v~~v~PG~v~-  272 (365)
                      .|++.|+..+.                      .++..+|++||+|+++|+++++.|  ++    ++|+||+++||+|+ 
T Consensus      2289 ii~~~ss~~g~----------------------~g~~~aYsASKaAl~~LtrslA~E~~~a----~~IrVn~v~PG~v~t 2342 (3089)
T 3zen_D         2289 VVLPGSPNRGM----------------------FGGDGAYGEAKSALDALENRWSAEKSWA----ERVSLAHALIGWTKG 2342 (3089)
T ss_dssp             EEEEECSSTTS----------------------CSSCSSHHHHGGGHHHHHHHHHHCSTTT----TTEEEEEEECCCEEC
T ss_pred             EEEECCccccc----------------------CCCchHHHHHHHHHHHHHHHHHhccccC----CCeEEEEEeecccCC
Confidence            23333433322                      234568999999999999999999  64    67999999999998 


Q ss_pred             CCccccchhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhcCCCC
Q 017812          273 TNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPE  316 (365)
Q Consensus       273 T~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~A~~i~~~~l~~~~  316 (365)
                      |++..........   ....+. +..+|+|+|..++  +|+++.
T Consensus      2343 T~l~~~~~~~~~~---~~~~~~-r~~~PeEIA~avl--fLaS~~ 2380 (3089)
T 3zen_D         2343 TGLMGQNDAIVSA---VEEAGV-TTYTTDEMAAMLL--DLCTVE 2380 (3089)
T ss_dssp             STTTTTTTTTHHH---HGGGSC-BCEEHHHHHHHHH--HTTSHH
T ss_pred             CcccccchhHHHH---HHhcCC-CCCCHHHHHHHHH--HHhChh
Confidence            7776542221111   111122 3449999999999  777764

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.95  E-value=7.1e-27  Score=211.08  Aligned_cols=206  Identities=16%  Similarity=0.057  Sum_probs=159.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      ++|+|+||||+||||++++++|+++|++|++++|++.+.+           +.++.++.+|++|.++++++++       
T Consensus         2 ~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~-----------~~~~~~~~~Dl~d~~~~~~~~~-------   63 (267)
T 3rft_A            2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA-----------GPNEECVQCDLADANAVNAMVA-------   63 (267)
T ss_dssp             CEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC-----------CTTEEEEECCTTCHHHHHHHHT-------
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc-----------CCCCEEEEcCCCCHHHHHHHHc-------
Confidence            4689999999999999999999999999999999975432           3578999999999999887664       


Q ss_pred             ccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcc
Q 017812          138 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNET  217 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~  217 (365)
                            ++|+||||||+.      +.+.+++++++|+.|++++++++.+.    + .++||++||..++.......    
T Consensus        64 ------~~D~vi~~Ag~~------~~~~~~~~~~~N~~g~~~l~~a~~~~----~-~~~iv~~SS~~~~g~~~~~~----  122 (267)
T 3rft_A           64 ------GCDGIVHLGGIS------VEKPFEQILQGNIIGLYNLYEAARAH----G-QPRIVFASSNHTIGYYPQTE----  122 (267)
T ss_dssp             ------TCSEEEECCSCC------SCCCHHHHHHHHTHHHHHHHHHHHHT----T-CCEEEEEEEGGGGTTSBTTS----
T ss_pred             ------CCCEEEECCCCc------CcCCHHHHHHHHHHHHHHHHHHHHHc----C-CCEEEEEcchHHhCCCCCCC----
Confidence                  489999999983      34568899999999999999999443    2 58999999988773322111    


Q ss_pred             ccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhcCC
Q 017812          218 ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLL  297 (365)
Q Consensus       218 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  297 (365)
                          ...+..+.++...|+.||++.+.+++.++.++      |+++++|+||.|.++.......             ..+
T Consensus       123 ----~~~e~~~~~~~~~Y~~sK~~~e~~~~~~a~~~------g~~~~~vr~~~v~~~~~~~~~~-------------~~~  179 (267)
T 3rft_A          123 ----RLGPDVPARPDGLYGVSKCFGENLARMYFDKF------GQETALVRIGSCTPEPNNYRML-------------STW  179 (267)
T ss_dssp             ----CBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH------CCCEEEEEECBCSSSCCSTTHH-------------HHB
T ss_pred             ----CCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh------CCeEEEEEeecccCCCCCCCce-------------eeE
Confidence                11122566777899999999999999999875      6788999999998876543211             123


Q ss_pred             CCHHHHHHHHHHHhcCCCCCcccEEeCC
Q 017812          298 QSPEKGINSVLDAALAPPETSGVYFFGG  325 (365)
Q Consensus       298 ~~p~e~A~~i~~~~l~~~~~~G~~~~~~  325 (365)
                      .+++++++.+..++..++...+.++...
T Consensus       180 ~~~~d~a~~~~~~~~~~~~~~~~~~~~s  207 (267)
T 3rft_A          180 FSHDDFVSLIEAVFRAPVLGCPVVWGAS  207 (267)
T ss_dssp             CCHHHHHHHHHHHHHCSCCCSCEEEECC
T ss_pred             EcHHHHHHHHHHHHhCCCCCceEEEEeC
Confidence            5899999999876655544444455443

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.94  E-value=5.7e-26  Score=222.26  Aligned_cols=207  Identities=15%  Similarity=0.179  Sum_probs=168.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCch---hHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSH---LLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  133 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~---~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~  133 (365)
                      .++++|||||+||||+++|++|+++|+ +|++++|+..   .++++.+++...  +.++.++.||++|.+++++++++  
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~--g~~v~~~~~Dvtd~~~v~~~~~~--  333 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGH--GCEVVHAACDVAERDALAALVTA--  333 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTT--TCEEEEEECCSSCHHHHHHHHHH--
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhc--CCEEEEEEeCCCCHHHHHHHHhc--
Confidence            579999999999999999999999999 7999999874   466777777654  56899999999999999888764  


Q ss_pred             HHHhccCCCCCeeEEEecCCcccC--CCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017812          134 QWLLDSDMHSSIQLLINNAGILAT--SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  211 (365)
Q Consensus       134 ~~~~~~~~~~~id~lv~nAG~~~~--~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~  211 (365)
                               +++|+||||||+...  ..+.+.+.++.++++|+.|++++.+.+.+..   + .++||++||.++.     
T Consensus       334 ---------~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~---~-~~~~V~~SS~a~~-----  395 (511)
T 2z5l_A          334 ---------YPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIK---G-LDAFVLFSSVTGT-----  395 (511)
T ss_dssp             ---------SCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCT---T-CCCEEEEEEGGGT-----
T ss_pred             ---------CCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhcc---C-CCEEEEEeCHHhc-----
Confidence                     579999999998743  4577899999999999999999998875431   2 5799999999988     


Q ss_pred             cCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcc-cCCccccchhHHHHHHHHH
Q 017812          212 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVV-KTNIMREVPSFLSLMAFTV  290 (365)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v-~T~~~~~~~~~~~~~~~~~  290 (365)
                                     .+.+++..|++||++++.|++.++       ..|+++++|+||++ +|+|.......  ...   
T Consensus       396 ---------------~g~~g~~~YaaaKa~ld~la~~~~-------~~gi~v~sv~pG~~~~tgm~~~~~~~--~~~---  448 (511)
T 2z5l_A          396 ---------------WGNAGQGAYAAANAALDALAERRR-------AAGLPATSVAWGLWGGGGMAAGAGEE--SLS---  448 (511)
T ss_dssp             ---------------TCCTTBHHHHHHHHHHHHHHHHHH-------TTTCCCEEEEECCBCSTTCCCCHHHH--HHH---
T ss_pred             ---------------CCCCCCHHHHHHHHHHHHHHHHHH-------HcCCcEEEEECCcccCCcccccccHH--HHH---
Confidence                           777889999999999999998653       57999999999999 88887653211  111   


Q ss_pred             HHHhcCCCCHHHHHHHHHHHhcCC
Q 017812          291 LKLLGLLQSPEKGINSVLDAALAP  314 (365)
Q Consensus       291 ~~~~~~~~~p~e~A~~i~~~~l~~  314 (365)
                       .......+|+++++.+..++..+
T Consensus       449 -~~g~~~l~~e~~a~~l~~al~~~  471 (511)
T 2z5l_A          449 -RRGLRAMDPDAAVDALLGAMGRN  471 (511)
T ss_dssp             -HHTBCCBCHHHHHHHHHHHHHHT
T ss_pred             -hcCCCCCCHHHHHHHHHHHHhCC
Confidence             11124579999999999766443

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.94  E-value=1.2e-26  Score=226.19  Aligned_cols=210  Identities=21%  Similarity=0.195  Sum_probs=165.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCch---hHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSH---LLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  133 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~---~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~  133 (365)
                      .++++|||||+||||+++|++|+++|+ +|++++|+..   .++++.+++...  +.++.++.||++|.+++.++++++ 
T Consensus       225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~--g~~v~~~~~Dv~d~~~v~~~~~~i-  301 (486)
T 2fr1_A          225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEAL--GARTTVAACDVTDRESVRELLGGI-  301 (486)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHTS-
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhc--CCEEEEEEeCCCCHHHHHHHHHHH-
Confidence            589999999999999999999999999 5999999875   466777777665  568999999999999999998877 


Q ss_pred             HHHhccCCCCCeeEEEecCCcccC--CCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017812          134 QWLLDSDMHSSIQLLINNAGILAT--SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  211 (365)
Q Consensus       134 ~~~~~~~~~~~id~lv~nAG~~~~--~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~  211 (365)
                      +      .++++|+||||||+...  ..+.+.+++++++++|+.|++++.+.+.+.    + .++||++||.++.     
T Consensus       302 ~------~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~----~-~~~~V~~SS~a~~-----  365 (486)
T 2fr1_A          302 G------DDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTREL----D-LTAFVLFSSFASA-----  365 (486)
T ss_dssp             C------TTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS----C-CSEEEEEEEHHHH-----
T ss_pred             H------hcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcC----C-CCEEEEEcChHhc-----
Confidence            3      45899999999998743  457799999999999999999999987553    2 5899999999988     


Q ss_pred             cCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCC-ccccchhHHHHHHHHH
Q 017812          212 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTN-IMREVPSFLSLMAFTV  290 (365)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~-~~~~~~~~~~~~~~~~  290 (365)
                                     .+.+++..|+++|++++.|++.++       ..|+++++|+||.+.|+ |......  ..   ..
T Consensus       366 ---------------~g~~g~~~Yaaaka~l~~la~~~~-------~~gi~v~~i~pG~~~~~gm~~~~~~--~~---~~  418 (486)
T 2fr1_A          366 ---------------FGAPGLGGYAPGNAYLDGLAQQRR-------SDGLPATAVAWGTWAGSGMAEGPVA--DR---FR  418 (486)
T ss_dssp             ---------------TCCTTCTTTHHHHHHHHHHHHHHH-------HTTCCCEEEEECCBC-----------------CT
T ss_pred             ---------------CCCCCCHHHHHHHHHHHHHHHHHH-------hcCCeEEEEECCeeCCCcccchhHH--HH---HH
Confidence                           777888999999999998877654       46899999999999876 4322110  00   00


Q ss_pred             HHHhcCCCCHHHHHHHHHHHhcCC
Q 017812          291 LKLLGLLQSPEKGINSVLDAALAP  314 (365)
Q Consensus       291 ~~~~~~~~~p~e~A~~i~~~~l~~  314 (365)
                       .......+|+++++.+..++..+
T Consensus       419 -~~g~~~i~~e~~a~~l~~~l~~~  441 (486)
T 2fr1_A          419 -RHGVIEMPPETACRALQNALDRA  441 (486)
T ss_dssp             -TTTEECBCHHHHHHHHHHHHHTT
T ss_pred             -hcCCCCCCHHHHHHHHHHHHhCC
Confidence             00013569999999999766543

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.93  E-value=4.6e-26  Score=201.82  Aligned_cols=209  Identities=14%  Similarity=0.030  Sum_probs=151.0

Q ss_pred             CCCCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCce-EEEEecCCChhhHHHHHH
Q 017812           52 PPITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARL-EAFQVDLSSFQSVLKFKD  130 (365)
Q Consensus        52 ~~~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~-~~~~~Dls~~~~v~~~~~  130 (365)
                      +...+++|++++|||||||||++++++|+++|++|++++|+.++++++.+        ..+ .++++|++  +++.+   
T Consensus        14 ~~~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~--------~~~~~~~~~Dl~--~~~~~---   80 (236)
T 3e8x_A           14 RENLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE--------RGASDIVVANLE--EDFSH---   80 (236)
T ss_dssp             -------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH--------TTCSEEEECCTT--SCCGG---
T ss_pred             ccccCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh--------CCCceEEEcccH--HHHHH---
Confidence            34567899999999999999999999999999999999999988765432        257 88999999  33322   


Q ss_pred             HHHHHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc
Q 017812          131 SLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN  210 (365)
Q Consensus       131 ~~~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~  210 (365)
                                ..+++|+||||||...      .+++++.+++|+.++..+++++...    + .++||++||.++.... 
T Consensus        81 ----------~~~~~D~vi~~ag~~~------~~~~~~~~~~n~~~~~~l~~a~~~~----~-~~~iv~~SS~~~~~~~-  138 (236)
T 3e8x_A           81 ----------AFASIDAVVFAAGSGP------HTGADKTILIDLWGAIKTIQEAEKR----G-IKRFIMVSSVGTVDPD-  138 (236)
T ss_dssp             ----------GGTTCSEEEECCCCCT------TSCHHHHHHTTTHHHHHHHHHHHHH----T-CCEEEEECCTTCSCGG-
T ss_pred             ----------HHcCCCEEEECCCCCC------CCCccccchhhHHHHHHHHHHHHHc----C-CCEEEEEecCCCCCCC-
Confidence                      2357999999999753      2467899999999999999998443    2 5799999997655110 


Q ss_pred             ccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHH
Q 017812          211 AQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTV  290 (365)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~  290 (365)
                                      ...++...|+.||++++.+.+          ..|+++++++||++.|+..........     .
T Consensus       139 ----------------~~~~~~~~Y~~sK~~~e~~~~----------~~gi~~~~lrpg~v~~~~~~~~~~~~~-----~  187 (236)
T 3e8x_A          139 ----------------QGPMNMRHYLVAKRLADDELK----------RSSLDYTIVRPGPLSNEESTGKVTVSP-----H  187 (236)
T ss_dssp             ----------------GSCGGGHHHHHHHHHHHHHHH----------HSSSEEEEEEECSEECSCCCSEEEEES-----S
T ss_pred             ----------------CChhhhhhHHHHHHHHHHHHH----------HCCCCEEEEeCCcccCCCCCCeEEecc-----C
Confidence                            011567899999999988764          258999999999999987543211000     0


Q ss_pred             HHHhcCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCC
Q 017812          291 LKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKG  327 (365)
Q Consensus       291 ~~~~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g  327 (365)
                      ......+.+++|+|+++++++.. +...|+.|..++|
T Consensus       188 ~~~~~~~i~~~Dva~~~~~~~~~-~~~~g~~~~v~~~  223 (236)
T 3e8x_A          188 FSEITRSITRHDVAKVIAELVDQ-QHTIGKTFEVLNG  223 (236)
T ss_dssp             CSCCCCCEEHHHHHHHHHHHTTC-GGGTTEEEEEEEC
T ss_pred             CCcccCcEeHHHHHHHHHHHhcC-ccccCCeEEEeCC
Confidence            00113467999999999975543 3366777776655

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.93  E-value=3.8e-24  Score=197.56  Aligned_cols=255  Identities=9%  Similarity=-0.024  Sum_probs=188.7

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHH-HCCCEEEEEecCchh------------HHHHHHHHHhhcCCCceEEEEecCCChh
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALS-REGFHVVLVGRSSHL------------LSETMADITSRNKDARLEAFQVDLSSFQ  123 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la-~~G~~Vil~~r~~~~------------~~~~~~~l~~~~~~~~~~~~~~Dls~~~  123 (365)
                      ..+|+|||||||+|||+++|..|| +.|++|++++++.+.            ...+.+++++.  +.+...+.||++|.+
T Consensus        48 ~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~--G~~a~~i~~Dv~d~e  125 (401)
T 4ggo_A           48 KAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKRE--GLYSVTIDGDAFSDE  125 (401)
T ss_dssp             CCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHH--TCCEEEEESCTTSHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHc--CCCceeEeCCCCCHH
Confidence            468999999999999999999999 689999999886532            33455566665  568899999999999


Q ss_pred             hHHHHHHHHHHHHhccCCCCCeeEEEecCCcccCC------------------------------------CCCCHHHHh
Q 017812          124 SVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATS------------------------------------SRLTPEGYD  167 (365)
Q Consensus       124 ~v~~~~~~~~~~~~~~~~~~~id~lv~nAG~~~~~------------------------------------~~~~~~~~~  167 (365)
                      +++++++++++      .+|+||+||||+|.....                                    ...+.++++
T Consensus       126 ~i~~vi~~i~~------~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie  199 (401)
T 4ggo_A          126 IKAQVIEEAKK------KGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAA  199 (401)
T ss_dssp             HHHHHHHHHHH------TTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHH
T ss_pred             HHHHHHHHHHH------hcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHH
Confidence            99999999999      779999999999965210                                    012455566


Q ss_pred             HhHHH---HhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCccccccccccCCCCChh--hhhhhhHHHH
Q 017812          168 QMMST---NYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCA--RIYEYSKLCL  242 (365)
Q Consensus       168 ~~~~v---N~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~~sK~a~  242 (365)
                      .+..+   ..++.+...+...+.|.+   ++++|.+|+.++.                    ...|.+  ..++++|++|
T Consensus       200 ~T~~vMg~s~~s~w~~al~~a~lla~---G~siva~SYiGse--------------------~t~P~Y~~G~mG~AKaaL  256 (401)
T 4ggo_A          200 ATVKVMGGEDWERWIKQLSKEGLLEE---GCITLAYSYIGPE--------------------ATQALYRKGTIGKAKEHL  256 (401)
T ss_dssp             HHHHHHSSHHHHHHHHHHHHTTCEEE---EEEEEEEECCCCG--------------------GGHHHHTTSHHHHHHHHH
T ss_pred             HHHHHHhhhHHHHHHHHHHhhhcccC---CceEEEEeccCcc--------------------eeecCCCccHHHHHHHHH
Confidence            55554   556666677777777765   5899999998875                    334443  4789999999


Q ss_pred             HHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhcCCCCCcccEE
Q 017812          243 LIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYF  322 (365)
Q Consensus       243 ~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~A~~i~~~~l~~~~~~G~~~  322 (365)
                      +..++.|+.+++     +++++++.||.+.|.....+|....+..... ..++...+.|.+.+.+.++|-..-...+.-.
T Consensus       257 Ea~~r~La~eL~-----~~~a~v~v~~a~vT~AssaIP~~ply~~~l~-kvmk~~g~heg~ieq~~rl~~~~ly~~~~~~  330 (401)
T 4ggo_A          257 EATAHRLNKENP-----SIRAFVSVNKGLVTRASAVIPVIPLYLASLF-KVMKEKGNHEGCIEQITRLYAERLYRKDGTI  330 (401)
T ss_dssp             HHHHHHHHHHCT-----TEEEEEEECCCCCCTTGGGSSSHHHHHHHHH-HHHHHHTCCCCHHHHHHHHHHHTTSCTTCCC
T ss_pred             HHHHHHHHHhcC-----CCcEEEEEcCccccchhhcCCCchHHHHHHH-HHHHhcCCCCchHHHHHHHHHHhhccCCCCC
Confidence            999999999985     4899999999999999998887655443332 2344455888899999988765433322222


Q ss_pred             eCCCCccccCCcccCCHHHHH---HHHHH
Q 017812          323 FGGKGRTVNSSALSFNSKLAG---ELWTT  348 (365)
Q Consensus       323 ~~~~g~~~~~~~~~~d~~~~~---~lw~~  348 (365)
                      ..|+..-+...+...+++.|.   .+|+.
T Consensus       331 ~~D~~~r~r~d~~el~~~vq~~v~~~~~~  359 (401)
T 4ggo_A          331 PVDEENRIRIDDWELEEDVQKAVSALMEK  359 (401)
T ss_dssp             CCCTTSCEESCTTTTCHHHHHHHHHHHHH
T ss_pred             CcCCCCCccCchhhcCHHHHHHHHHHHHH
Confidence            234444455666777777774   45543

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.92  E-value=8.9e-24  Score=197.41  Aligned_cols=243  Identities=13%  Similarity=0.065  Sum_probs=168.8

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEecCc-hhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhc
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS-HLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  138 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~  138 (365)
                      ++||||||+|+||++++++|+++|++|++++|+. ....+..+.+..   ..++.++.+|++|.+++.++++.       
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~---~~~~~~~~~Dl~d~~~~~~~~~~-------   71 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS---LGNFEFVHGDIRNKNDVTRLITK-------   71 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT---TCCCEEEECCTTCHHHHHHHHHH-------
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhcc---CCceEEEEcCCCCHHHHHHHHhc-------
Confidence            5799999999999999999999999999999864 233333444433   23688999999999998887764       


Q ss_pred             cCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC-CCc-
Q 017812          139 SDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV-NNE-  216 (365)
Q Consensus       139 ~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~-~~~-  216 (365)
                          .++|+||||||....  ..+.++++..+++|+.|+..+++++.+.+.    .++||++||.+.+....... ..+ 
T Consensus        72 ----~~~d~vih~A~~~~~--~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~----~~~iv~~SS~~v~g~~~~~~~~e~~  141 (347)
T 1orr_A           72 ----YMPDSCFHLAGQVAM--TTSIDNPCMDFEINVGGTLNLLEAVRQYNS----NCNIIYSSTNKVYGDLEQYKYNETE  141 (347)
T ss_dssp             ----HCCSEEEECCCCCCH--HHHHHCHHHHHHHHHHHHHHHHHHHHHHCT----TCEEEEEEEGGGGTTCTTSCEEECS
T ss_pred             ----cCCCEEEECCcccCh--hhhhhCHHHHHHHHHHHHHHHHHHHHHhCC----CceEEEeccHHHhCCCCcCCccccc
Confidence                249999999997432  223456788999999999999999988763    26999999987664321110 000 


Q ss_pred             -cc----cccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccch--hHHH-HHH-
Q 017812          217 -TI----TGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP--SFLS-LMA-  287 (365)
Q Consensus       217 -~~----~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~--~~~~-~~~-  287 (365)
                       .+    ......+..+..+...|+.||++.+.+++.++.++      |+++++++||.|.++......  .... ... 
T Consensus       142 ~~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~------gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~  215 (347)
T 1orr_A          142 TRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF------GLNTVVFRHSSMYGGRQFATYDQGWVGWFCQK  215 (347)
T ss_dssp             SCEEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH------CCEEEEEEECCEECTTCCCBTTBCHHHHHHHH
T ss_pred             ccccccccccCccccCCCCCCCchHHHHHHHHHHHHHHHHHh------CCcEEEEccCceeCcCCCCCCcCcHHHHHHHH
Confidence             00    00011222455577899999999999999998864      699999999999998754321  1111 111 


Q ss_pred             HHHHH-----HhcC---------CCCHHHHHHHHHHHhcCCCCCcccEEeCCCCc
Q 017812          288 FTVLK-----LLGL---------LQSPEKGINSVLDAALAPPETSGVYFFGGKGR  328 (365)
Q Consensus       288 ~~~~~-----~~~~---------~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~  328 (365)
                      .....     +...         +..++|+|++++.++..++..+|+.|..++|+
T Consensus       216 ~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~v~~~~  270 (347)
T 1orr_A          216 AVEIKNGINKPFTISGNGKQVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTI  270 (347)
T ss_dssp             HHHHHTTCCCCEEEESSSCCEEECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCG
T ss_pred             HHhCcccCCCCeEEecCCcceEeeEEHHHHHHHHHHHHhccccCCCCEEEeCCCC
Confidence            11111     2221         45899999999976643234568788777775

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.92  E-value=2e-23  Score=194.49  Aligned_cols=242  Identities=15%  Similarity=0.091  Sum_probs=168.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEE-EecCCChhhHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAF-QVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~-~~Dls~~~~v~~~~~~~~~  134 (365)
                      .+++++|+||||+|+||++++++|+++|++|++++|+.++.+.+.+.+.... +.++.++ .+|++|.+++++++     
T Consensus         8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~-----   81 (342)
T 1y1p_A            8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKY-PGRFETAVVEDMLKQGAYDEVI-----   81 (342)
T ss_dssp             SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHS-TTTEEEEECSCTTSTTTTTTTT-----
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccC-CCceEEEEecCCcChHHHHHHH-----
Confidence            3678999999999999999999999999999999999887776666554433 2467888 89999998876543     


Q ss_pred             HHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc----
Q 017812          135 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN----  210 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~----  210 (365)
                              .++|+||||||.....     ++.++.+++|+.|+..+++++.+.   .+ .++||++||.+++....    
T Consensus        82 --------~~~d~vih~A~~~~~~-----~~~~~~~~~n~~g~~~ll~~~~~~---~~-~~~iv~~SS~~~~~~~~~~~~  144 (342)
T 1y1p_A           82 --------KGAAGVAHIASVVSFS-----NKYDEVVTPAIGGTLNALRAAAAT---PS-VKRFVLTSSTVSALIPKPNVE  144 (342)
T ss_dssp             --------TTCSEEEECCCCCSCC-----SCHHHHHHHHHHHHHHHHHHHHTC---TT-CCEEEEECCGGGTCCCCTTCC
T ss_pred             --------cCCCEEEEeCCCCCCC-----CCHHHHHHHHHHHHHHHHHHHHhC---CC-CcEEEEeccHHHhcCCCCCCC
Confidence                    2599999999986432     246789999999999999998763   12 47999999987763211    


Q ss_pred             -ccCCCcccccccc------ccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccch---
Q 017812          211 -AQVNNETITGKFF------LRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP---  280 (365)
Q Consensus       211 -~~~~~~~~~~~~~------~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~---  280 (365)
                       ..++++......+      ....+..+...|+.||++.+.+++.+++++.    .++++++++||.+.++......   
T Consensus       145 ~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~----~~~~~~~~rp~~v~g~~~~~~~~~~  220 (342)
T 1y1p_A          145 GIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENK----PHFTLNAVLPNYTIGTIFDPETQSG  220 (342)
T ss_dssp             CCEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHC----CSSEEEEEEESEEECCCSCTTTCCC
T ss_pred             CcccCccccCchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcC----CCceEEEEcCCceECCCCCCCCCCc
Confidence             1111111000000      0001234678999999999999999999985    4899999999999998764321   


Q ss_pred             hHHHHHHHHH-------HH--HhcCCCCHHHHHHHHHHHhcCCCCCcccEEeCC
Q 017812          281 SFLSLMAFTV-------LK--LLGLLQSPEKGINSVLDAALAPPETSGVYFFGG  325 (365)
Q Consensus       281 ~~~~~~~~~~-------~~--~~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~  325 (365)
                      ..........       ..  +.+.+..++|+|++++.++.. +...|.+++..
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~-~~~~g~~~~~~  273 (342)
T 1y1p_A          221 STSGWMMSLFNGEVSPALALMPPQYYVSAVDIGLLHLGCLVL-PQIERRRVYGT  273 (342)
T ss_dssp             HHHHHHHHHHTTCCCHHHHTCCSEEEEEHHHHHHHHHHHHHC-TTCCSCEEEEC
T ss_pred             cHHHHHHHHHcCCCccccccCCcCCEeEHHHHHHHHHHHHcC-cccCCceEEEe
Confidence            1111110000       00  122457899999999976654 34456555443

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.92  E-value=3.1e-24  Score=200.19  Aligned_cols=241  Identities=16%  Similarity=0.069  Sum_probs=170.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .+++||||||+|+||++++++|+++|++|++++|+.+...+..+++.... +.++.++.+|++|.+++++++++      
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~------   76 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKIT-GKTPAFHETDVSDERALARIFDA------   76 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHH-SCCCEEECCCTTCHHHHHHHHHH------
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhc-CCCceEEEeecCCHHHHHHHHhc------
Confidence            46799999999999999999999999999999998877666666665543 34688999999999998887763      


Q ss_pred             ccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcc
Q 017812          138 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNET  217 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~  217 (365)
                           .++|+||||||+....  ...+..++.+++|+.++..+++++.    +.+ .++||++||.+.+.....      
T Consensus        77 -----~~~d~vih~A~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~----~~~-~~~iv~~SS~~~~g~~~~------  138 (341)
T 3enk_A           77 -----HPITAAIHFAALKAVG--ESVAKPIEYYRNNLDSLLSLLRVMR----ERA-VKRIVFSSSATVYGVPER------  138 (341)
T ss_dssp             -----SCCCEEEECCCCCCHH--HHHHCHHHHHHHHHHHHHHHHHHHH----HTT-CCEEEEEEEGGGBCSCSS------
T ss_pred             -----cCCcEEEECccccccC--ccccChHHHHHHHHHHHHHHHHHHH----hCC-CCEEEEEecceEecCCCC------
Confidence                 4699999999985321  1234456789999999998877654    333 579999999877632211      


Q ss_pred             ccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcccc----c-----hhHHHHHHH
Q 017812          218 ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE----V-----PSFLSLMAF  288 (365)
Q Consensus       218 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~----~-----~~~~~~~~~  288 (365)
                         ..+.+..+..+...|+.||++.+.+++.++.++     .++++++++||.+..+....    .     .........
T Consensus       139 ---~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-----~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~  210 (341)
T 3enk_A          139 ---SPIDETFPLSATNPYGQTKLMAEQILRDVEAAD-----PSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQ  210 (341)
T ss_dssp             ---SSBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHC-----TTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHH
T ss_pred             ---CCCCCCCCCCCCChhHHHHHHHHHHHHHHhhcC-----CCceEEEEeeccccCCccccccCCCcccCccchHHHHHH
Confidence               111122455667899999999999999999874     37999999999997764211    0     111111111


Q ss_pred             HHHH---Hh---------------cCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCcccc
Q 017812          289 TVLK---LL---------------GLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTVN  331 (365)
Q Consensus       289 ~~~~---~~---------------~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~~  331 (365)
                      ....   ++               ..+..++|+|++++.++... +...|..|...+|+++.
T Consensus       211 ~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s  272 (341)
T 3enk_A          211 VAVGKLEKLRVFGSDYPTPDGTGVRDYIHVVDLARGHIAALDALERRDASLTVNLGTGRGYS  272 (341)
T ss_dssp             HHHTSSSCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHHHTSCEEEEESCSCCEE
T ss_pred             HHhcCCCceEEeCCccCCCCCCeeEeeEEHHHHHHHHHHHHHhhhcCCcceEEEeCCCCcee
Confidence            1100   00               01346799999999665442 23457778777787763

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.92  E-value=3.1e-24  Score=200.83  Aligned_cols=220  Identities=16%  Similarity=0.196  Sum_probs=165.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHC-CC-EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSRE-GF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  133 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~-G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~  133 (365)
                      .+++|+||||||+|+||++++++|+++ |+ +|++++|++.+.+++.+++.    ..++.++.+|++|.+++.+++    
T Consensus        18 ~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~----~~~v~~~~~Dl~d~~~l~~~~----   89 (344)
T 2gn4_A           18 MLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN----DPRMRFFIGDVRDLERLNYAL----   89 (344)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC----CTTEEEEECCTTCHHHHHHHT----
T ss_pred             hhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc----CCCEEEEECCCCCHHHHHHHH----
Confidence            467999999999999999999999999 98 99999999888777666553    347899999999998877654    


Q ss_pred             HHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          134 QWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       134 ~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                               .++|+||||||....  .......++.+++|+.|+.++++++.+.-     .++||++||..+.       
T Consensus        90 ---------~~~D~Vih~Aa~~~~--~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~-----v~~~V~~SS~~~~-------  146 (344)
T 2gn4_A           90 ---------EGVDICIHAAALKHV--PIAEYNPLECIKTNIMGASNVINACLKNA-----ISQVIALSTDKAA-------  146 (344)
T ss_dssp             ---------TTCSEEEECCCCCCH--HHHHHSHHHHHHHHHHHHHHHHHHHHHTT-----CSEEEEECCGGGS-------
T ss_pred             ---------hcCCEEEECCCCCCC--CchhcCHHHHHHHHHHHHHHHHHHHHhCC-----CCEEEEecCCccC-------
Confidence                     248999999997532  11223456899999999999999998752     4799999997654       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHH--H
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTV--L  291 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~--~  291 (365)
                                   .   +...|++||++.+.+++++++++.   ..|+++++++||.|.++...-.+..........  .
T Consensus       147 -------------~---p~~~Y~~sK~~~E~~~~~~~~~~~---~~g~~~~~vRpg~v~g~~~~~i~~~~~~~~~g~~~~  207 (344)
T 2gn4_A          147 -------------N---PINLYGATKLCSDKLFVSANNFKG---SSQTQFSVVRYGNVVGSRGSVVPFFKKLVQNKASEI  207 (344)
T ss_dssp             -------------S---CCSHHHHHHHHHHHHHHHGGGCCC---SSCCEEEEECCCEETTCTTSHHHHHHHHHHHTCCCE
T ss_pred             -------------C---CccHHHHHHHHHHHHHHHHHHHhC---CCCcEEEEEEeccEECCCCCHHHHHHHHHHcCCCce
Confidence                         2   246899999999999999998876   689999999999999876432222211110000  0


Q ss_pred             -----HHhcCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCC
Q 017812          292 -----KLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKG  327 (365)
Q Consensus       292 -----~~~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g  327 (365)
                           ...+.+.+++|+|++++.++...  ..|..|..+++
T Consensus       208 ~i~~~~~~r~~i~v~D~a~~v~~~l~~~--~~g~~~~~~~~  246 (344)
T 2gn4_A          208 PITDIRMTRFWITLDEGVSFVLKSLKRM--HGGEIFVPKIP  246 (344)
T ss_dssp             EESCTTCEEEEECHHHHHHHHHHHHHHC--CSSCEEEECCC
T ss_pred             EEeCCCeEEeeEEHHHHHHHHHHHHhhc--cCCCEEecCCC
Confidence                 00112468999999999766543  35666665443

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.92  E-value=8e-25  Score=194.38  Aligned_cols=203  Identities=14%  Similarity=0.103  Sum_probs=146.5

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~--~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      +++|+++||||+||||++++++|+++|+  +|++++|+++++++..        ...+.++.+|++|.+++++++     
T Consensus        16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~--------~~~~~~~~~D~~d~~~~~~~~-----   82 (242)
T 2bka_A           16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA--------YKNVNQEVVDFEKLDDYASAF-----   82 (242)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG--------GGGCEEEECCGGGGGGGGGGG-----
T ss_pred             hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc--------cCCceEEecCcCCHHHHHHHh-----
Confidence            4578999999999999999999999999  9999999976543211        125788999999998876643     


Q ss_pred             HHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017812          135 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  214 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~  214 (365)
                              .++|+||||||....     .+.++..+++|+.++..+++++.+    .+ .++||++||.+++        
T Consensus        83 --------~~~d~vi~~ag~~~~-----~~~~~~~~~~n~~~~~~~~~~~~~----~~-~~~iv~~SS~~~~--------  136 (242)
T 2bka_A           83 --------QGHDVGFCCLGTTRG-----KAGAEGFVRVDRDYVLKSAELAKA----GG-CKHFNLLSSKGAD--------  136 (242)
T ss_dssp             --------SSCSEEEECCCCCHH-----HHHHHHHHHHHTHHHHHHHHHHHH----TT-CCEEEEECCTTCC--------
T ss_pred             --------cCCCEEEECCCcccc-----cCCcccceeeeHHHHHHHHHHHHH----CC-CCEEEEEccCcCC--------
Confidence                    259999999997432     245688999999999998887643    33 5799999998876        


Q ss_pred             CccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCe-EEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017812          215 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHV-SVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  293 (365)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi-~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  293 (365)
                                  .  ++...|++||++++.+++.+          ++ ++++++||++.|+..................|
T Consensus       137 ------------~--~~~~~Y~~sK~~~e~~~~~~----------~~~~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~~~  192 (242)
T 2bka_A          137 ------------K--SSNFLYLQVKGEVEAKVEEL----------KFDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSLP  192 (242)
T ss_dssp             ------------T--TCSSHHHHHHHHHHHHHHTT----------CCSEEEEEECCEEECTTGGGSHHHHHHHHHHCSCC
T ss_pred             ------------C--CCcchHHHHHHHHHHHHHhc----------CCCCeEEEcCceecCCCCCCcHHHHHHHHhhcccC
Confidence                        2  23357999999999887543          34 79999999999997533111100000000011


Q ss_pred             ----hcCCCCHHHHHHHHHHHhcCCCCCcccEEe
Q 017812          294 ----LGLLQSPEKGINSVLDAALAPPETSGVYFF  323 (365)
Q Consensus       294 ----~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~  323 (365)
                          .+++.+++|+|+++++++.. +...|.++.
T Consensus       193 ~~~~~~~~~~~~dva~~~~~~~~~-~~~~~~~~~  225 (242)
T 2bka_A          193 DSWASGHSVPVVTVVRAMLNNVVR-PRDKQMELL  225 (242)
T ss_dssp             TTGGGGTEEEHHHHHHHHHHHHTS-CCCSSEEEE
T ss_pred             ccccCCcccCHHHHHHHHHHHHhC-ccccCeeEe
Confidence                34667999999999965543 333344443

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.92  E-value=7e-24  Score=196.14  Aligned_cols=229  Identities=12%  Similarity=0.015  Sum_probs=164.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      +.++||||||+|+||++++++|+++|++|++++|+.+. +.    +       ++.++.+|++|.+++.++++.      
T Consensus        11 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----l-------~~~~~~~Dl~d~~~~~~~~~~------   72 (321)
T 2pk3_A           11 GSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----P-------NVEMISLDIMDSQRVKKVISD------   72 (321)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----T-------TEEEEECCTTCHHHHHHHHHH------
T ss_pred             CcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----c-------eeeEEECCCCCHHHHHHHHHh------
Confidence            45799999999999999999999999999999998754 11    1       578899999999998887654      


Q ss_pred             ccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcc
Q 017812          138 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNET  217 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~  217 (365)
                           +++|+||||||....  ..+.++++..+++|+.|+..+++++ +.+.  + .++||++||.+.+.....  .   
T Consensus        73 -----~~~d~vih~A~~~~~--~~~~~~~~~~~~~Nv~g~~~l~~a~-~~~~--~-~~~iv~~SS~~v~g~~~~--~---  136 (321)
T 2pk3_A           73 -----IKPDYIFHLAAKSSV--KDSWLNKKGTFSTNVFGTLHVLDAV-RDSN--L-DCRILTIGSSEEYGMILP--E---  136 (321)
T ss_dssp             -----HCCSEEEECCSCCCH--HHHTTCHHHHHHHHHHHHHHHHHHH-HHHT--C-CCEEEEEEEGGGTBSCCG--G---
T ss_pred             -----cCCCEEEEcCcccch--hhhhhcHHHHHHHHHHHHHHHHHHH-HHhC--C-CCeEEEEccHHhcCCCCC--C---
Confidence                 359999999997532  1223467889999999999999999 6552  1 479999999976632200  0   


Q ss_pred             ccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHH---H--
Q 017812          218 ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVL---K--  292 (365)
Q Consensus       218 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~---~--  292 (365)
                        ...+.+..+.++...|+.||++.+.+++.++.++      |++++.++||.+.++.................   .  
T Consensus       137 --~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~------gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g~~  208 (321)
T 2pk3_A          137 --ESPVSEENQLRPMSPYGVSKASVGMLARQYVKAY------GMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQ  208 (321)
T ss_dssp             --GCSBCTTSCCBCCSHHHHHHHHHHHHHHHHHHHH------CCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHTTSS
T ss_pred             --CCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHc------CCCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhcCCC
Confidence              0111122455667899999999999999998763      79999999999999876532111111111111   0  


Q ss_pred             -H---------hcCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017812          293 -L---------LGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  330 (365)
Q Consensus       293 -~---------~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~  330 (365)
                       +         ...+..++|+|++++.++..+  ..|..|..++|+++
T Consensus       209 ~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~--~~g~~~~i~~~~~~  254 (321)
T 2pk3_A          209 EPIIKVGNLEAVRDFTDVRDIVQAYWLLSQYG--KTGDVYNVCSGIGT  254 (321)
T ss_dssp             CSEEEESCSSCEEEEEEHHHHHHHHHHHHHHC--CTTCEEEESCSCEE
T ss_pred             CCeEEeCCCCcEEeeEEHHHHHHHHHHHHhCC--CCCCeEEeCCCCCe
Confidence             0         112468999999999766543  45677777777766

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.91  E-value=4.5e-24  Score=199.16  Aligned_cols=242  Identities=12%  Similarity=0.079  Sum_probs=164.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      ++++|+||||+|+||++++++|+++|++|++++|+.++.+.  +.+.......++.++.+|++|.+++.++++.+     
T Consensus         2 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----   74 (345)
T 2z1m_A            2 SGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFAS--WRLKELGIENDVKIIHMDLLEFSNIIRTIEKV-----   74 (345)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTT--HHHHHTTCTTTEEECCCCTTCHHHHHHHHHHH-----
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCccccc--ccHhhccccCceeEEECCCCCHHHHHHHHHhc-----
Confidence            57899999999999999999999999999999998765422  12222222346889999999999988877653     


Q ss_pred             ccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcc
Q 017812          138 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNET  217 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~  217 (365)
                            ++|+||||||....  +.+.++++..+++|+.|+..+++++.+. ..   .++||++||.+.+......     
T Consensus        75 ------~~d~vih~A~~~~~--~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~---~~~iv~~SS~~vyg~~~~~-----  137 (345)
T 2z1m_A           75 ------QPDEVYNLAAQSFV--GVSFEQPILTAEVDAIGVLRILEALRTV-KP---DTKFYQASTSEMFGKVQEI-----  137 (345)
T ss_dssp             ------CCSEEEECCCCCCH--HHHTTSHHHHHHHHTHHHHHHHHHHHHH-CT---TCEEEEEEEGGGGCSCSSS-----
T ss_pred             ------CCCEEEECCCCcch--hhhhhCHHHHHHHHHHHHHHHHHHHHHh-CC---CceEEEEechhhcCCCCCC-----
Confidence                  48999999997531  2234567889999999999999999853 11   2799999998765322110     


Q ss_pred             ccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHH-----
Q 017812          218 ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLK-----  292 (365)
Q Consensus       218 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~-----  292 (365)
                          .+.+..+.++...|+.||++.+.+++.++.++...-..++.++.+.||...|.+...+.............     
T Consensus       138 ----~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (345)
T 2z1m_A          138 ----PQTEKTPFYPRSPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLG  213 (345)
T ss_dssp             ----SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEES
T ss_pred             ----CCCccCCCCCCChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeC
Confidence                11112455667899999999999999999887421113456677889888776543221111100000000     


Q ss_pred             --Hhc-CCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017812          293 --LLG-LLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  330 (365)
Q Consensus       293 --~~~-~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~  330 (365)
                        ... .+..++|+|++++.++..+.  .|.| ...+|+++
T Consensus       214 ~~~~~~~~~~v~Dva~a~~~~~~~~~--~~~~-~i~~~~~~  251 (345)
T 2z1m_A          214 NLNAKRDWGYAPEYVEAMWLMMQQPE--PDDY-VIATGETH  251 (345)
T ss_dssp             CTTCEECCEEHHHHHHHHHHHHTSSS--CCCE-EECCSCCE
T ss_pred             CCCceeeeEEHHHHHHHHHHHHhCCC--CceE-EEeCCCCc
Confidence              011 26789999999996554332  3554 44556655

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.91  E-value=1.6e-23  Score=196.93  Aligned_cols=245  Identities=13%  Similarity=0.090  Sum_probs=167.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHC-CCEEEEEecCch--hHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           61 VCIVTGATSGLGAAAAYALSRE-GFHVVLVGRSSH--LLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~-G~~Vil~~r~~~--~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      +||||||+|+||++++++|+++ |++|++++|+..  ..+.+ +++.   ...++.++.+|++|.+++.+++++      
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~------   71 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESL-SDIS---ESNRYNFEHADICDSAEITRIFEQ------   71 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGG-TTTT---TCTTEEEEECCTTCHHHHHHHHHH------
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhh-hhhh---cCCCeEEEECCCCCHHHHHHHHhh------
Confidence            4999999999999999999998 799999999752  22211 1111   134788999999999998887764      


Q ss_pred             ccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCC----CCCeEEEEcCCcccccccc--
Q 017812          138 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP----VPSRIVNVTSFTHRNVFNA--  211 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~----~~g~iV~vsS~~~~~~~~~--  211 (365)
                           .++|+||||||....  +.+.+++++.+++|+.|+..+++++.+.|...+    ..++||++||.+.+.....  
T Consensus        72 -----~~~d~vih~A~~~~~--~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~  144 (361)
T 1kew_A           72 -----YQPDAVMHLAAESHV--DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPD  144 (361)
T ss_dssp             -----HCCSEEEECCSCCCH--HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGG
T ss_pred             -----cCCCEEEECCCCcCh--hhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccc
Confidence                 259999999997531  223456788999999999999999999875321    1259999999875532210  


Q ss_pred             cCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHH
Q 017812          212 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVL  291 (365)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~  291 (365)
                      ... .......+.+..+.++...|+.||++.+.+++.++.++      |+++++++||.|.++.................
T Consensus       145 ~~~-~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~------gi~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~  217 (361)
T 1kew_A          145 EVE-NSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY------GLPTIVTNCSNNYGPYHFPEKLIPLVILNALE  217 (361)
T ss_dssp             GSC-TTSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH------CCCEEEEEECEEESTTCCTTSHHHHHHHHHHH
T ss_pred             ccc-ccccCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHh------CCcEEEEeeceeECCCCCcccHHHHHHHHHHc
Confidence            000 00000012222455667899999999999999998875      68999999999999875421111111111100


Q ss_pred             -HH---------hcCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcccc
Q 017812          292 -KL---------LGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  331 (365)
Q Consensus       292 -~~---------~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~~  331 (365)
                       .+         ...+..++|+|++++.++..  ...|+.|..++|+++.
T Consensus       218 ~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~--~~~g~~~~v~~~~~~s  265 (361)
T 1kew_A          218 GKPLPIYGKGDQIRDWLYVEDHARALHMVVTE--GKAGETYNIGGHNEKK  265 (361)
T ss_dssp             TCCEEEETTSCCEEEEEEHHHHHHHHHHHHHH--CCTTCEEEECCCCEEE
T ss_pred             CCCceEcCCCceeEeeEEHHHHHHHHHHHHhC--CCCCCEEEecCCCeee
Confidence             01         11345799999999976543  2467788878887663

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.91  E-value=3.5e-23  Score=192.70  Aligned_cols=234  Identities=12%  Similarity=0.069  Sum_probs=163.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCC--CEEEEEecCch--hHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREG--FHVVLVGRSSH--LLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  133 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G--~~Vil~~r~~~--~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~  133 (365)
                      ++++|+||||+|+||++++++|+++|  ++|++++|+..  ..+.+ +++   ....++.++.+|++|.+++.+++.   
T Consensus         2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~-~~~---~~~~~~~~~~~Dl~d~~~~~~~~~---   74 (336)
T 2hun_A            2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANL-KDL---EDDPRYTFVKGDVADYELVKELVR---   74 (336)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGG-TTT---TTCTTEEEEECCTTCHHHHHHHHH---
T ss_pred             CCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHH-hhh---ccCCceEEEEcCCCCHHHHHHHhh---
Confidence            35679999999999999999999997  89999998742  11111 111   113478899999999988877651   


Q ss_pred             HHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          134 QWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       134 ~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                                ++|+||||||....  ..+.++++..+++|+.|+..+++++.+.  ..  .++||++||.+.+.....  
T Consensus        75 ----------~~d~vih~A~~~~~--~~~~~~~~~~~~~Nv~g~~~l~~a~~~~--~~--~~~iv~~SS~~vyg~~~~--  136 (336)
T 2hun_A           75 ----------KVDGVVHLAAESHV--DRSISSPEIFLHSNVIGTYTLLESIRRE--NP--EVRFVHVSTDEVYGDILK--  136 (336)
T ss_dssp             ----------TCSEEEECCCCCCH--HHHHHCTHHHHHHHHHHHHHHHHHHHHH--CT--TSEEEEEEEGGGGCCCSS--
T ss_pred             ----------CCCEEEECCCCcCh--hhhhhCHHHHHHHHHHHHHHHHHHHHHh--CC--CcEEEEeccHHHHCCCCC--
Confidence                      49999999997531  2234567889999999999999999887  21  379999999876532210  


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHH--
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVL--  291 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~--  291 (365)
                        .     .+.+..+.++...|+.||++.+.+++.++.++      |+++++++||.|.++.................  
T Consensus       137 --~-----~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~------~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~  203 (336)
T 2hun_A          137 --G-----SFTENDRLMPSSPYSATKAASDMLVLGWTRTY------NLNASITRCTNNYGPYQFPEKLIPKTIIRASLGL  203 (336)
T ss_dssp             --S-----CBCTTBCCCCCSHHHHHHHHHHHHHHHHHHHT------TCEEEEEEECEEESTTCCTTSHHHHHHHHHHTTC
T ss_pred             --C-----CcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh------CCCEEEEeeeeeeCcCCCcCchHHHHHHHHHcCC
Confidence              0     11112345567799999999999999998763      79999999999999875321111111100000  


Q ss_pred             --------HHhcCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcccc
Q 017812          292 --------KLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  331 (365)
Q Consensus       292 --------~~~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~~  331 (365)
                              .....+..++|+|++++.++..  ..+|+.|..++|++..
T Consensus       204 ~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~--~~~g~~~~v~~~~~~s  249 (336)
T 2hun_A          204 KIPIYGTGKNVRDWLYVEDHVRAIELVLLK--GESREIYNISAGEEKT  249 (336)
T ss_dssp             CEEEETC---CEEEEEHHHHHHHHHHHHHH--CCTTCEEEECCSCEEC
T ss_pred             CceEeCCCCceeeeEEHHHHHHHHHHHHhC--CCCCCEEEeCCCCccc
Confidence                    0112346799999999966533  3467778778777663

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.90  E-value=6.2e-23  Score=192.72  Aligned_cols=242  Identities=14%  Similarity=0.032  Sum_probs=167.7

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      +++++|+||||+|+||++++++|+++|++|++++|+.++.....+.+.   ...++.++.+|++|.+++.++++.+    
T Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~----   79 (357)
T 1rkx_A            7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR---VADGMQSEIGDIRDQNKLLESIREF----   79 (357)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT---TTTTSEEEECCTTCHHHHHHHHHHH----
T ss_pred             hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhc---cCCceEEEEccccCHHHHHHHHHhc----
Confidence            567899999999999999999999999999999998766544444332   1347889999999999988877643    


Q ss_pred             hccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017812          137 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  216 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~  216 (365)
                             ++|+||||||...  ...+.++++..+++|+.|+..+++++.+.  .  ..++||++||.+.+.......   
T Consensus        80 -------~~d~vih~A~~~~--~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~--~~~~~v~~SS~~vyg~~~~~~---  143 (357)
T 1rkx_A           80 -------QPEIVFHMAAQPL--VRLSYSEPVETYSTNVMGTVYLLEAIRHV--G--GVKAVVNITSDKCYDNKEWIW---  143 (357)
T ss_dssp             -------CCSEEEECCSCCC--HHHHHHCHHHHHHHHTHHHHHHHHHHHHH--C--CCCEEEEECCGGGBCCCCSSS---
T ss_pred             -------CCCEEEECCCCcc--cccchhCHHHHHHHHHHHHHHHHHHHHHh--C--CCCeEEEecCHHHhCCCCcCC---
Confidence                   4899999999631  12235667889999999999999999764  1  147999999988663321100   


Q ss_pred             cccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCC---CCCCeEEEEecCCcccCCccccchhHHHHHHHHHHH-
Q 017812          217 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLD---KSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLK-  292 (365)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~---~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~-  292 (365)
                           ...+..+..+...|+.||++.+.+++.++.++...   ...|+++++++||.+.++.................. 
T Consensus       144 -----~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g  218 (357)
T 1rkx_A          144 -----GYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQS  218 (357)
T ss_dssp             -----CBCTTSCBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTT
T ss_pred             -----CCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcC
Confidence                 01111344566789999999999999999887300   013899999999999987642111111111111000 


Q ss_pred             -H--------hcCCCCHHHHHHHHHHHhcC---CCCCcccEEeCCC
Q 017812          293 -L--------LGLLQSPEKGINSVLDAALA---PPETSGVYFFGGK  326 (365)
Q Consensus       293 -~--------~~~~~~p~e~A~~i~~~~l~---~~~~~G~~~~~~~  326 (365)
                       +        ...+..++|+|++++.++..   .+...|..|...+
T Consensus       219 ~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~~~ni~~  264 (357)
T 1rkx_A          219 QPVIIRNPHAIRPWQHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGP  264 (357)
T ss_dssp             CCEECSCTTCEECCEETHHHHHHHHHHHHHHHHTCGGGCSEEECCC
T ss_pred             CCEEECCCCCeeccEeHHHHHHHHHHHHHhhhhcCCCCCceEEECC
Confidence             0        11246789999999976643   2223455666554

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.90  E-value=3.6e-24  Score=199.12  Aligned_cols=229  Identities=12%  Similarity=0.050  Sum_probs=153.9

Q ss_pred             CCCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHH
Q 017812           53 PITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  132 (365)
Q Consensus        53 ~~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~  132 (365)
                      ...++++++||||||+|+||++++++|+++|++|++++|+.+...+..+++      .++.++.+|++|.+++.++++++
T Consensus        14 ~~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l------~~v~~~~~Dl~d~~~~~~~~~~~   87 (330)
T 2pzm_A           14 LVPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPV------AGLSVIEGSVTDAGLLERAFDSF   87 (330)
T ss_dssp             CCSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSC------TTEEEEECCTTCHHHHHHHHHHH
T ss_pred             CcccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhcc------CCceEEEeeCCCHHHHHHHHhhc
Confidence            344688999999999999999999999999999999999764322111111      36889999999999988877643


Q ss_pred             HHHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017812          133 QQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       133 ~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~  212 (365)
                                 ++|+||||||.....   +.++++  +++|+.++..+++++...    + .++||++||.+.+......
T Consensus        88 -----------~~D~vih~A~~~~~~---~~~~~~--~~~N~~~~~~l~~a~~~~----~-~~~iV~~SS~~~~~~~~~~  146 (330)
T 2pzm_A           88 -----------KPTHVVHSAAAYKDP---DDWAED--AATNVQGSINVAKAASKA----G-VKRLLNFQTALCYGRPATV  146 (330)
T ss_dssp             -----------CCSEEEECCCCCSCT---TCHHHH--HHHHTHHHHHHHHHHHHH----T-CSEEEEEEEGGGGCSCSSS
T ss_pred             -----------CCCEEEECCccCCCc---cccChh--HHHHHHHHHHHHHHHHHc----C-CCEEEEecCHHHhCCCccC
Confidence                       499999999986432   445555  999999999999999743    2 4799999998776321110


Q ss_pred             CCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeE-EEEecCCcccCCccccchhHHHHHHHHHH
Q 017812          213 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVS-VIAADPGVVKTNIMREVPSFLSLMAFTVL  291 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~-v~~v~PG~v~T~~~~~~~~~~~~~~~~~~  291 (365)
                        .....     +..  .+...|+.||++.+.+++.+  ++.   ...+| ++.+.||. .|++...+   ...... ..
T Consensus       147 --~~~~~-----E~~--~~~~~Y~~sK~~~e~~~~~~--~~~---~~~iR~~~v~gp~~-~~~~~~~~---~~~~~~-~~  207 (330)
T 2pzm_A          147 --PIPID-----SPT--APFTSYGISKTAGEAFLMMS--DVP---VVSLRLANVTGPRL-AIGPIPTF---YKRLKA-GQ  207 (330)
T ss_dssp             --SBCTT-----CCC--CCCSHHHHHHHHHHHHHHTC--SSC---EEEEEECEEECTTC-CSSHHHHH---HHHHHT-TC
T ss_pred             --CCCcC-----CCC--CCCChHHHHHHHHHHHHHHc--CCC---EEEEeeeeeECcCC-CCCHHHHH---HHHHHc-CC
Confidence              00000     001  24578999999999998876  333   34555 55566664 33322111   000000 00


Q ss_pred             HH-----hcCCCCHHHHHH-HHHHHhcCCCCCcccEEeCCCCccc
Q 017812          292 KL-----LGLLQSPEKGIN-SVLDAALAPPETSGVYFFGGKGRTV  330 (365)
Q Consensus       292 ~~-----~~~~~~p~e~A~-~i~~~~l~~~~~~G~~~~~~~g~~~  330 (365)
                      ..     ...+..++|+|+ +++.++.. +.  |..|..++|++.
T Consensus       208 ~~~~~~~~~~~i~~~Dva~~a~~~~~~~-~~--g~~~~v~~~~~~  249 (330)
T 2pzm_A          208 KCFCSDTVRDFLDMSDFLAIADLSLQEG-RP--TGVFNVSTGEGH  249 (330)
T ss_dssp             CCCEESCEECEEEHHHHHHHHHHHTSTT-CC--CEEEEESCSCCE
T ss_pred             EEeCCCCEecceeHHHHHHHHHHHHhhc-CC--CCEEEeCCCCCC
Confidence            00     234579999999 99854433 22  777877777766

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.90  E-value=1.2e-22  Score=190.43  Aligned_cols=239  Identities=12%  Similarity=0.019  Sum_probs=167.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCch----hHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH----LLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  132 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~----~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~  132 (365)
                      +++++|+||||+|+||++++++|+++|++|++++|+..    .++++.+++.... ..++.++.+|++|.+++.++++  
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~--  101 (352)
T 1sb8_A           25 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQ-WSNFKFIQGDIRNLDDCNNACA--  101 (352)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHH-HTTEEEEECCTTSHHHHHHHHT--
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhccccc-CCceEEEECCCCCHHHHHHHhc--
Confidence            46789999999999999999999999999999999764    3333332221110 2468899999999988776653  


Q ss_pred             HHHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017812          133 QQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       133 ~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~  212 (365)
                                 ++|+|||+||.....  .+.++++..+++|+.++..+++++.+.    + .++||++||.+.+......
T Consensus       102 -----------~~d~vih~A~~~~~~--~~~~~~~~~~~~n~~~~~~l~~a~~~~----~-~~~~v~~SS~~~~~~~~~~  163 (352)
T 1sb8_A          102 -----------GVDYVLHQAALGSVP--RSINDPITSNATNIDGFLNMLIAARDA----K-VQSFTYAASSSTYGDHPGL  163 (352)
T ss_dssp             -----------TCSEEEECCSCCCHH--HHHHCHHHHHHHHTHHHHHHHHHHHHT----T-CSEEEEEEEGGGGTTCCCS
T ss_pred             -----------CCCEEEECCcccCch--hhhhCHHHHHHHHHHHHHHHHHHHHHc----C-CCEEEEeccHHhcCCCCCC
Confidence                       499999999974321  134567889999999999999998763    2 4799999998876432210


Q ss_pred             CCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc---hhHHHHHHHH
Q 017812          213 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV---PSFLSLMAFT  289 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~---~~~~~~~~~~  289 (365)
                               .+.+..+..+...|+.||++.+.+++.++.++      |+++++++||.+.++.....   ..........
T Consensus       164 ---------~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~------g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~  228 (352)
T 1sb8_A          164 ---------PKVEDTIGKPLSPYAVTKYVNELYADVFSRCY------GFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSS  228 (352)
T ss_dssp             ---------SBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH------CCCCEEEEECCEECTTCCCCSTTCCHHHHHHHH
T ss_pred             ---------CCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc------CCCEEEEEECceeCcCCCCCcchhhHHHHHHHH
Confidence                     01111334556789999999999999998764      68999999999998875421   0111111111


Q ss_pred             HH--HHh---------cCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcccc
Q 017812          290 VL--KLL---------GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  331 (365)
Q Consensus       290 ~~--~~~---------~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~~  331 (365)
                      ..  .+.         ..+..++|+|++++.++...+...|..|...+|+++.
T Consensus       229 ~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~ni~~~~~~s  281 (352)
T 1sb8_A          229 MIQGDDVYINGDGETSRDFCYIENTVQANLLAATAGLDARNQVYNIAVGGRTS  281 (352)
T ss_dssp             HHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCGGGCSEEEEESCSCCEE
T ss_pred             HHCCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhccccCCCceEEeCCCCCcc
Confidence            11  011         1346799999999976655344567777777777663

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.90  E-value=5.5e-23  Score=180.11  Aligned_cols=176  Identities=10%  Similarity=0.059  Sum_probs=132.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHH-HCCCEEEEEecCch-hHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           59 RPVCIVTGATSGLGAAAAYALS-REGFHVVLVGRSSH-LLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la-~~G~~Vil~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      .|+++||||+||||++++++|+ ++|++|++++|+++ +++++.    ..  ..++.++++|++|.++++++++      
T Consensus         5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~----~~--~~~~~~~~~D~~d~~~~~~~~~------   72 (221)
T 3r6d_A            5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI----ID--HERVTVIEGSFQNPGXLEQAVT------   72 (221)
T ss_dssp             CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH----HT--STTEEEEECCTTCHHHHHHHHT------
T ss_pred             EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc----cC--CCceEEEECCCCCHHHHHHHHc------
Confidence            3789999999999999999999 89999999999987 655443    12  4578999999999998877653      


Q ss_pred             hccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017812          137 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  216 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~  216 (365)
                             ++|+||||||..                 |+.     ++.+++.|++.+ .++||++||..++          
T Consensus        73 -------~~d~vv~~ag~~-----------------n~~-----~~~~~~~~~~~~-~~~iv~iSs~~~~----------  112 (221)
T 3r6d_A           73 -------NAEVVFVGAMES-----------------GSD-----MASIVKALSRXN-IRRVIGVSMAGLS----------  112 (221)
T ss_dssp             -------TCSEEEESCCCC-----------------HHH-----HHHHHHHHHHTT-CCEEEEEEETTTT----------
T ss_pred             -------CCCEEEEcCCCC-----------------Chh-----HHHHHHHHHhcC-CCeEEEEeeceec----------
Confidence                   489999999963                 322     788888888765 6899999999877          


Q ss_pred             cccccccccCCCCChhh----------hhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCC-ccccchhHHHH
Q 017812          217 TITGKFFLRSKCYPCAR----------IYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTN-IMREVPSFLSL  285 (365)
Q Consensus       217 ~~~~~~~~~~~~~~~~~----------~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~-~~~~~~~~~~~  285 (365)
                                .+.+...          .|+.+|.+++.+.+          ..|+++++|+||++.++ ...........
T Consensus       113 ----------~~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~----------~~~i~~~~vrpg~v~~~~~~~~~~~~~~~  172 (221)
T 3r6d_A          113 ----------GEFPVALEKWTFDNLPISYVQGERQARNVLR----------ESNLNYTILRLTWLYNDPEXTDYELIPEG  172 (221)
T ss_dssp             ----------SCSCHHHHHHHHHTSCHHHHHHHHHHHHHHH----------HSCSEEEEEEECEEECCTTCCCCEEECTT
T ss_pred             ----------CCCCcccccccccccccHHHHHHHHHHHHHH----------hCCCCEEEEechhhcCCCCCcceeeccCC
Confidence                      2222222          79999999987663          25899999999999887 33222110000


Q ss_pred             HHHHHHHHhcCCCCHHHHHHHHHHHh
Q 017812          286 MAFTVLKLLGLLQSPEKGINSVLDAA  311 (365)
Q Consensus       286 ~~~~~~~~~~~~~~p~e~A~~i~~~~  311 (365)
                           ....+...+++|+|+.+++++
T Consensus       173 -----~~~~~~~~~~~dvA~~~~~l~  193 (221)
T 3r6d_A          173 -----AQFNDAQVSREAVVKAIFDIL  193 (221)
T ss_dssp             -----SCCCCCEEEHHHHHHHHHHHH
T ss_pred             -----ccCCCceeeHHHHHHHHHHHH
Confidence                 001123568999999999766

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.89  E-value=6e-22  Score=185.47  Aligned_cols=254  Identities=12%  Similarity=0.015  Sum_probs=177.4

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCC---CceEEEEecCCChhhHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKD---ARLEAFQVDLSSFQSVLKFKDSLQ  133 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~---~~~~~~~~Dls~~~~v~~~~~~~~  133 (365)
                      +++++||||||||+||++++++|+++|++|++++|+.....+....+....+.   .++.++.+|++|.+++.++++   
T Consensus        23 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---   99 (351)
T 3ruf_A           23 FSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK---   99 (351)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT---
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhc---
Confidence            46789999999999999999999999999999999876544444555433211   578999999999988776543   


Q ss_pred             HHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          134 QWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       134 ~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                                ++|+|||+||....  ..+.++.+..+++|+.++..+++++...    + .+++|++||.+.+...... 
T Consensus       100 ----------~~d~Vih~A~~~~~--~~~~~~~~~~~~~nv~~~~~ll~a~~~~----~-~~~~v~~SS~~vyg~~~~~-  161 (351)
T 3ruf_A          100 ----------GVDHVLHQAALGSV--PRSIVDPITTNATNITGFLNILHAAKNA----Q-VQSFTYAASSSTYGDHPAL-  161 (351)
T ss_dssp             ----------TCSEEEECCCCCCH--HHHHHCHHHHHHHHTHHHHHHHHHHHHT----T-CSEEEEEEEGGGGTTCCCS-
T ss_pred             ----------CCCEEEECCccCCc--chhhhCHHHHHHHHHHHHHHHHHHHHHc----C-CCEEEEEecHHhcCCCCCC-
Confidence                      59999999997432  1234556788999999999999988554    2 4699999998876332211 


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccch---hHHHHHHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP---SFLSLMAFTV  290 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~---~~~~~~~~~~  290 (365)
                              .+.+..+..+...|+.||.+.+.+++.++.+.      |++++.++||.+..+......   ..........
T Consensus       162 --------~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~------g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~  227 (351)
T 3ruf_A          162 --------PKVEENIGNPLSPYAVTKYVNEIYAQVYARTY------GFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAM  227 (351)
T ss_dssp             --------SBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH------CCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHH
T ss_pred             --------CCccCCCCCCCChhHHHHHHHHHHHHHHHHHh------CCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHH
Confidence                    11122444567889999999999999998764      688999999999877543220   1111111111


Q ss_pred             HH--Hh---c------CCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccccCCcccCCHHHHHHHHHHHHHhhhc
Q 017812          291 LK--LL---G------LLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFIN  355 (365)
Q Consensus       291 ~~--~~---~------~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~~~~~~~~d~~~~~~lw~~~~~~~~~  355 (365)
                      ..  +.   +      .+..++|+|++++.++...+...|..|...+|+++.          .+.+++...+.++.
T Consensus       228 ~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~ni~~~~~~s----------~~e~~~~i~~~~g~  293 (351)
T 3ruf_A          228 LKGDDVYINGDGETSRDFCYIDNVIQMNILSALAKDSAKDNIYNVAVGDRTT----------LNELSGYIYDELNL  293 (351)
T ss_dssp             HHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCGGGCSEEEEESCSCCEE----------HHHHHHHHHHHHHT
T ss_pred             HcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhhccccCCCEEEeCCCCccc----------HHHHHHHHHHHhCc
Confidence            10  11   1      235699999999976665445667788777777763          23455555555554

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.89  E-value=2.2e-22  Score=189.41  Aligned_cols=233  Identities=15%  Similarity=0.125  Sum_probs=156.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHH--CCCEEEEEecCchhHHHHHHHH-----HhhcCCCceEEEEecCCChhhHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSR--EGFHVVLVGRSSHLLSETMADI-----TSRNKDARLEAFQVDLSSFQSVLKF  128 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~--~G~~Vil~~r~~~~~~~~~~~l-----~~~~~~~~~~~~~~Dls~~~~v~~~  128 (365)
                      ++++++||||||+|+||++++++|++  .|++|++++|+...........     .....+..+.++.+|++|.++++++
T Consensus         7 ~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~   86 (362)
T 3sxp_A            7 ELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRL   86 (362)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHH
T ss_pred             hcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHh
Confidence            47899999999999999999999999  9999999999765211100000     0011234678999999999888775


Q ss_pred             HHHHHHHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccc
Q 017812          129 KDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNV  208 (365)
Q Consensus       129 ~~~~~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~  208 (365)
                          .        ..++|+||||||+...    +.++++..+++|+.|+..+++++...      +++||++||.+.+..
T Consensus        87 ----~--------~~~~D~vih~A~~~~~----~~~~~~~~~~~Nv~gt~~ll~aa~~~------~~~~V~~SS~~vyg~  144 (362)
T 3sxp_A           87 ----E--------KLHFDYLFHQAAVSDT----TMLNQELVMKTNYQAFLNLLEIARSK------KAKVIYASSAGVYGN  144 (362)
T ss_dssp             ----T--------TSCCSEEEECCCCCGG----GCCCHHHHHHHHTHHHHHHHHHHHHT------TCEEEEEEEGGGGCS
T ss_pred             ----h--------ccCCCEEEECCccCCc----cccCHHHHHHHHHHHHHHHHHHHHHc------CCcEEEeCcHHHhCC
Confidence                1        2569999999996533    44667899999999999999998432      356999999766533


Q ss_pred             ccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccch---hHHHH
Q 017812          209 FNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP---SFLSL  285 (365)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~---~~~~~  285 (365)
                      .....+          +..+..+.+.|+.||++.+.+++.++.+        +.++.++|+.+-.|......   .....
T Consensus       145 ~~~~~~----------E~~~~~p~~~Y~~sK~~~E~~~~~~~~~--------~~~~~lR~~~v~Gp~~~~~~~~~~~~~~  206 (362)
T 3sxp_A          145 TKAPNV----------VGKNESPENVYGFSKLCMDEFVLSHSND--------NVQVGLRYFNVYGPREFYKEKTASMVLQ  206 (362)
T ss_dssp             CCSSBC----------TTSCCCCSSHHHHHHHHHHHHHHHTTTT--------SCEEEEEECSEESTTCGGGGGGSCHHHH
T ss_pred             CCCCCC----------CCCCCCCCChhHHHHHHHHHHHHHHhcc--------CCEEEEEeCceeCcCCCCCCcchhHHHH
Confidence            322111          1234556678999999999988877543        66788888888766543211   11111


Q ss_pred             HHHHHH--HHh---------cCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcccc
Q 017812          286 MAFTVL--KLL---------GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  331 (365)
Q Consensus       286 ~~~~~~--~~~---------~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~~  331 (365)
                      ......  .+.         ..+..++|+|++++.++.  ...+| .|...+|++..
T Consensus       207 ~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~ai~~~~~--~~~~g-~~~i~~~~~~s  260 (362)
T 3sxp_A          207 LALGAMAFKEVKLFEFGEQLRDFVYIEDVIQANVKAMK--AQKSG-VYNVGYSQARS  260 (362)
T ss_dssp             HHHHHHTTSEEECSGGGCCEEECEEHHHHHHHHHHHTT--CSSCE-EEEESCSCEEE
T ss_pred             HHHHHHhCCCeEEECCCCeEEccEEHHHHHHHHHHHHh--cCCCC-EEEeCCCCCcc
Confidence            111100  011         123469999999995443  33467 67667777763

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.89  E-value=3.4e-22  Score=186.17  Aligned_cols=237  Identities=16%  Similarity=0.135  Sum_probs=154.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcC-CCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNK-DARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      ++|+||||||+|+||++++++|+++|++|++++|+.+..++... +..... ..++.++.+|++|.+++.++++      
T Consensus         4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   76 (337)
T 2c29_D            4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKH-LLDLPKAETHLTLWKADLADEGSFDEAIK------   76 (337)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHH-HHTSTTHHHHEEEEECCTTSTTTTHHHHT------
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHH-HHhcccCCCeEEEEEcCCCCHHHHHHHHc------
Confidence            57899999999999999999999999999999998765433322 111100 1357889999999998876653      


Q ss_pred             hccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc---cC
Q 017812          137 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA---QV  213 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~---~~  213 (365)
                             .+|+|||+||... ..  ..+..++.+++|+.|+..+++++.+...    .+|||++||.++......   ..
T Consensus        77 -------~~d~Vih~A~~~~-~~--~~~~~~~~~~~nv~gt~~ll~a~~~~~~----~~riV~~SS~~~~~~~~~~~~~~  142 (337)
T 2c29_D           77 -------GCTGVFHVATPMD-FE--SKDPENEVIKPTIEGMLGIMKSCAAAKT----VRRLVFTSSAGTVNIQEHQLPVY  142 (337)
T ss_dssp             -------TCSEEEECCCCCC-SS--CSSHHHHTHHHHHHHHHHHHHHHHHHSC----CCEEEEECCGGGTSCSSSCCSEE
T ss_pred             -------CCCEEEEeccccC-CC--CCChHHHHHHHHHHHHHHHHHHHHhCCC----ccEEEEeeeHhhcccCCCCCccc
Confidence                   3899999999642 11  1223457899999999999999987531    369999999875432111   01


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcccc-chhHHHHHH-----
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE-VPSFLSLMA-----  287 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~-~~~~~~~~~-----  287 (365)
                      +++......+.. ...++...|+.||++.+.+++.++++      .|+++++++||.|.+|.... .+.......     
T Consensus       143 ~E~~~~~~~~~~-~~~~~~~~Y~~sK~~~E~~~~~~~~~------~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g  215 (337)
T 2c29_D          143 DESCWSDMEFCR-AKKMTAWMYFVSKTLAEQAAWKYAKE------NNIDFITIIPTLVVGPFIMSSMPPSLITALSPITG  215 (337)
T ss_dssp             CTTCCCCHHHHH-HHCCTTHHHHHHHHHHHHHHHHHHHH------HTCCEEEEEECEEESCCSCSSCCHHHHHHTHHHHT
T ss_pred             CcccCCchhhhc-ccCCccchHHHHHHHHHHHHHHHHHH------cCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcC
Confidence            111000000000 00113457999999999998877654      47999999999999987532 222111100     


Q ss_pred             ---HHHHHHhcCCCCHHHHHHHHHHHhcCCCCCcccEEe
Q 017812          288 ---FTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFF  323 (365)
Q Consensus       288 ---~~~~~~~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~  323 (365)
                         .....+..++..++|+|++++.++.. +...|.|+.
T Consensus       216 ~~~~~~~~~~~~~i~v~Dva~a~~~~~~~-~~~~~~~~~  253 (337)
T 2c29_D          216 NEAHYSIIRQGQFVHLDDLCNAHIYLFEN-PKAEGRYIC  253 (337)
T ss_dssp             CGGGHHHHTEEEEEEHHHHHHHHHHHHHC-TTCCEEEEE
T ss_pred             CCccccccCCCCEEEHHHHHHHHHHHhcC-cccCceEEE
Confidence               00011223478999999999975543 344566544

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.89  E-value=3.8e-23  Score=180.91  Aligned_cols=199  Identities=11%  Similarity=0.145  Sum_probs=148.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCC-hhhHHHHHHHHHHHHhcc
Q 017812           61 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSS-FQSVLKFKDSLQQWLLDS  139 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~-~~~v~~~~~~~~~~~~~~  139 (365)
                      +++||||+|+||++++++|+++|++|++++|+.++.++.          .++.++++|++| .+++.+++          
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~----------~~~~~~~~D~~d~~~~~~~~~----------   61 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY----------NNVKAVHFDVDWTPEEMAKQL----------   61 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC----------TTEEEEECCTTSCHHHHHTTT----------
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc----------CCceEEEecccCCHHHHHHHH----------
Confidence            599999999999999999999999999999998754321          478999999999 87776643          


Q ss_pred             CCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcccc
Q 017812          140 DMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETIT  219 (365)
Q Consensus       140 ~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~~~  219 (365)
                         .++|+||||||...          +..+++|+.++..+++++..    .+ .++||++||..+.....  ..     
T Consensus        62 ---~~~d~vi~~ag~~~----------~~~~~~n~~~~~~l~~a~~~----~~-~~~iv~~SS~~~~~~~~--~~-----  116 (219)
T 3dqp_A           62 ---HGMDAIINVSGSGG----------KSLLKVDLYGAVKLMQAAEK----AE-VKRFILLSTIFSLQPEK--WI-----  116 (219)
T ss_dssp             ---TTCSEEEECCCCTT----------SSCCCCCCHHHHHHHHHHHH----TT-CCEEEEECCTTTTCGGG--CC-----
T ss_pred             ---cCCCEEEECCcCCC----------CCcEeEeHHHHHHHHHHHHH----hC-CCEEEEECcccccCCCc--cc-----
Confidence               35999999999854          23789999999999988843    22 47999999987662110  00     


Q ss_pred             ccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhcCCCC
Q 017812          220 GKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQS  299 (365)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (365)
                           + .+..+...|+.+|++.+.+.+    +     ..|++++.++||++.++.........        .....+.+
T Consensus       117 -----e-~~~~~~~~Y~~sK~~~e~~~~----~-----~~~i~~~ilrp~~v~g~~~~~~~~~~--------~~~~~~i~  173 (219)
T 3dqp_A          117 -----G-AGFDALKDYYIAKHFADLYLT----K-----ETNLDYTIIQPGALTEEEATGLIDIN--------DEVSASNT  173 (219)
T ss_dssp             -----S-HHHHHTHHHHHHHHHHHHHHH----H-----SCCCEEEEEEECSEECSCCCSEEEES--------SSCCCCEE
T ss_pred             -----c-cccccccHHHHHHHHHHHHHH----h-----ccCCcEEEEeCceEecCCCCCccccC--------CCcCCccc
Confidence                 0 112347789999999998876    2     57999999999999887544321110        12235679


Q ss_pred             HHHHHHHHHHHhcCCCCCcccEEeCCCCc
Q 017812          300 PEKGINSVLDAALAPPETSGVYFFGGKGR  328 (365)
Q Consensus       300 p~e~A~~i~~~~l~~~~~~G~~~~~~~g~  328 (365)
                      ++|+|+.++.++.. +...|+.|...+|.
T Consensus       174 ~~Dva~~i~~~l~~-~~~~g~~~~i~~g~  201 (219)
T 3dqp_A          174 IGDVADTIKELVMT-DHSIGKVISMHNGK  201 (219)
T ss_dssp             HHHHHHHHHHHHTC-GGGTTEEEEEEECS
T ss_pred             HHHHHHHHHHHHhC-ccccCcEEEeCCCC
Confidence            99999999976654 34457777665554

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.88  E-value=7.1e-22  Score=184.68  Aligned_cols=172  Identities=15%  Similarity=0.022  Sum_probs=130.4

Q ss_pred             CCCCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHH
Q 017812           52 PPITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDS  131 (365)
Q Consensus        52 ~~~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~  131 (365)
                      ++..+.++|+||||||+|+||.+++++|+++|++|++++|+.+.              .++.++.+|++|.+++.++++ 
T Consensus        12 ~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~--------------~~~~~~~~Dl~d~~~~~~~~~-   76 (347)
T 4id9_A           12 SGLVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG--------------TGGEEVVGSLEDGQALSDAIM-   76 (347)
T ss_dssp             ---------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS--------------SCCSEEESCTTCHHHHHHHHT-
T ss_pred             CcccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC--------------CCccEEecCcCCHHHHHHHHh-
Confidence            34556789999999999999999999999999999999998764              357889999999988876653 


Q ss_pred             HHHHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017812          132 LQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  211 (365)
Q Consensus       132 ~~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~  211 (365)
                                  ++|++||+||....    +.+.++..+++|+.++..+++++...    + .++||++||.+.+.....
T Consensus        77 ------------~~d~vih~A~~~~~----~~~~~~~~~~~nv~~~~~ll~a~~~~----~-~~~~V~~SS~~vyg~~~~  135 (347)
T 4id9_A           77 ------------GVSAVLHLGAFMSW----APADRDRMFAVNVEGTRRLLDAASAA----G-VRRFVFASSGEVYPENRP  135 (347)
T ss_dssp             ------------TCSEEEECCCCCCS----SGGGHHHHHHHHTHHHHHHHHHHHHT----T-CSEEEEEEEGGGTTTTSC
T ss_pred             ------------CCCEEEECCcccCc----chhhHHHHHHHHHHHHHHHHHHHHHc----C-CCeEEEECCHHHhCCCCC
Confidence                        49999999997532    34455899999999999999988552    2 479999999876633100


Q ss_pred             cCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCccc
Q 017812          212 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVK  272 (365)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~  272 (365)
                      .       ...+.+..+..+...|+.||++.+.+++.++.+      .|++++.++|+.+.
T Consensus       136 ~-------~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~------~~~~~~ilRp~~v~  183 (347)
T 4id9_A          136 E-------FLPVTEDHPLCPNSPYGLTKLLGEELVRFHQRS------GAMETVILRFSHTQ  183 (347)
T ss_dssp             S-------SSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHH------SSSEEEEEEECEEE
T ss_pred             C-------CCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHh------cCCceEEEccceEe
Confidence            0       011222245667789999999999999999875      47999999999997

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.88  E-value=6.5e-22  Score=184.98  Aligned_cols=238  Identities=13%  Similarity=0.075  Sum_probs=162.5

Q ss_pred             CEEEEecCCChHHHHHHHHHHHC--CCEEEEEecCchh-HHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           60 PVCIVTGATSGLGAAAAYALSRE--GFHVVLVGRSSHL-LSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~--G~~Vil~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      ++|+||||+|+||++++++|+++  |++|++++|+... ..+   .+... .+.++.++.+|++|.+++.++++      
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~---~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~------   74 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKA---NLEAI-LGDRVELVVGDIADAELVDKLAA------   74 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGG---GTGGG-CSSSEEEEECCTTCHHHHHHHHT------
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChh---HHhhh-ccCCeEEEECCCCCHHHHHHHhh------
Confidence            68999999999999999999999  8999999997531 011   11111 13578899999999988776653      


Q ss_pred             hccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC---
Q 017812          137 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV---  213 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~---  213 (365)
                             .+|+|||+||....  ..+.++++..+++|+.|+..+++++.+.    +  ++||++||.+.+.......   
T Consensus        75 -------~~d~vih~A~~~~~--~~~~~~~~~~~~~Nv~g~~~l~~a~~~~----~--~~~v~~SS~~vyg~~~~~~~~~  139 (348)
T 1oc2_A           75 -------KADAIVHYAAESHN--DNSLNDPSPFIHTNFIGTYTLLEAARKY----D--IRFHHVSTDEVYGDLPLREDLP  139 (348)
T ss_dssp             -------TCSEEEECCSCCCH--HHHHHCCHHHHHHHTHHHHHHHHHHHHH----T--CEEEEEEEGGGGCCBCCGGGST
T ss_pred             -------cCCEEEECCcccCc--cchhhCHHHHHHHHHHHHHHHHHHHHHh----C--CeEEEecccceeCCCccccccc
Confidence                   36999999997531  2234567889999999999999999876    2  4999999987653221100   


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHH-H
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVL-K  292 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~-~  292 (365)
                      .........+.+..+.++...|+.||++.+.+++.++.++      |+++++++||.+.++................. .
T Consensus       140 ~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~------gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~  213 (348)
T 1oc2_A          140 GHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF------GVKATISNCSNNYGPYQHIEKFIPRQITNILAGI  213 (348)
T ss_dssp             TTTCSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH------CCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTC
T ss_pred             ccccccCCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh------CCCEEEEeeceeeCCCCCccchHHHHHHHHHcCC
Confidence            0000000112222455667899999999999999998764      69999999999998875321111111111000 0


Q ss_pred             H---------hcCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017812          293 L---------LGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  330 (365)
Q Consensus       293 ~---------~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~  330 (365)
                      +         ...+..++|+|++++.++..  ...|+.|..++|++.
T Consensus       214 ~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~--~~~g~~~~i~~~~~~  258 (348)
T 1oc2_A          214 KPKLYGEGKNVRDWIHTNDHSTGVWAILTK--GRMGETYLIGADGEK  258 (348)
T ss_dssp             CCEEETTSCCEEECEEHHHHHHHHHHHHHH--CCTTCEEEECCSCEE
T ss_pred             CceEecCCCceEeeEEHHHHHHHHHHHhhC--CCCCCeEEeCCCCCC
Confidence            0         11346799999999976543  246777777777766

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.88  E-value=4e-21  Score=181.26  Aligned_cols=239  Identities=12%  Similarity=0.051  Sum_probs=153.0

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHH-HHHHHHHhhc--CCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLS-ETMADITSRN--KDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~-~~~~~l~~~~--~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      +++|+||||+|+||++++++|+++|++|++++|+.+... +..+++....  .+.++.++.+|++|.+++.++++.+   
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   77 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV---   77 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH---
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhc---
Confidence            368999999999999999999999999999999865421 1112221110  1346889999999999988877643   


Q ss_pred             HhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCC
Q 017812          136 LLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNN  215 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~  215 (365)
                              ++|+||||||....  ..+.++++..+++|+.++..+++++.+...+.  .++||++||.+.+.....    
T Consensus        78 --------~~d~vih~A~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~iv~~SS~~v~g~~~~----  141 (372)
T 1db3_A           78 --------QPDEVYNLGAMSHV--AVSFESPEYTADVDAMGTLRLLEAIRFLGLEK--KTRFYQASTSELYGLVQE----  141 (372)
T ss_dssp             --------CCSEEEECCCCCTT--TTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTT--TCEEEEEEEGGGGTTCCS----
T ss_pred             --------CCCEEEECCcccCc--cccccCHHHHHHHHHHHHHHHHHHHHHhCCCC--CcEEEEeCChhhhCCCCC----
Confidence                    48999999997543  23445678899999999999999998876432  379999999876633211    


Q ss_pred             ccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcccc-ch-hHHHHHHHHHH-H
Q 017812          216 ETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE-VP-SFLSLMAFTVL-K  292 (365)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~-~~-~~~~~~~~~~~-~  292 (365)
                      .     .+.+..+..+...|+.||++.+.+++.++.++      ++.+..+.|..+..|.... .. ........... .
T Consensus       142 ~-----~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~------~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g  210 (372)
T 1db3_A          142 I-----PQKETTPFYPRSPYAVAKLYAYWITVNYRESY------GMYACNGILFNHESPRRGETFVTRKITRAIANIAQG  210 (372)
T ss_dssp             S-----SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH------CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTT
T ss_pred             C-----CCCccCCCCCCChHHHHHHHHHHHHHHHHHHh------CCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcC
Confidence            0     11112344557789999999999999999876      3555566666554443221 11 10000000000 0


Q ss_pred             --H---h------cCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017812          293 --L---L------GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  330 (365)
Q Consensus       293 --~---~------~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~  330 (365)
                        +   .      ..+..++|+|++++.++.. +. .+ .|...+|++.
T Consensus       211 ~~~~~~~g~~~~~~~~i~v~Dva~a~~~~~~~-~~-~~-~~ni~~~~~~  256 (372)
T 1db3_A          211 LESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQ-EQ-PE-DFVIATGVQY  256 (372)
T ss_dssp             SCCCEEESCTTCEECCEEHHHHHHHHHHTTSS-SS-CC-CEEECCCCCE
T ss_pred             CCCceeecCCCceeeeeEHHHHHHHHHHHHhc-CC-Cc-eEEEcCCCce
Confidence              0   0      1246789999999964433 22 34 4454556655

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.88  E-value=1.7e-21  Score=182.08  Aligned_cols=239  Identities=14%  Similarity=0.105  Sum_probs=160.8

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchh------HHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHH
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHL------LSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  132 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~------~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~  132 (365)
                      +++|+||||+|+||.+++++|+++|++|++++|+...      ..+..+++.... +.++.++.+|++|.+++++++++ 
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~-   79 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELT-GRSVEFEEMDILDQGALQRLFKK-   79 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHH-TCCCEEEECCTTCHHHHHHHHHH-
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhcc-CCceEEEECCCCCHHHHHHHHHh-
Confidence            4789999999999999999999999999999986432      222333333221 34678999999999988777653 


Q ss_pred             HHHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017812          133 QQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       133 ~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~  212 (365)
                                .++|+||||||.....  .+.++.++.+++|+.++..+++++..    .+ .++||++||.+.+..... 
T Consensus        80 ----------~~~d~vih~A~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~iv~~SS~~~~g~~~~-  141 (348)
T 1ek6_A           80 ----------YSFMAVIHFAGLKAVG--ESVQKPLDYYRVNLTGTIQLLEIMKA----HG-VKNLVFSSSATVYGNPQY-  141 (348)
T ss_dssp             ----------CCEEEEEECCSCCCHH--HHHHCHHHHHHHHHHHHHHHHHHHHH----TT-CCEEEEEEEGGGGCSCSS-
T ss_pred             ----------cCCCEEEECCCCcCcc--chhhchHHHHHHHHHHHHHHHHHHHH----hC-CCEEEEECcHHHhCCCCC-
Confidence                      1599999999975321  13456788999999999999987643    22 479999999876632111 


Q ss_pred             CCCccccccccccCCCC-ChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcc----ccc-----hhH
Q 017812          213 VNNETITGKFFLRSKCY-PCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIM----REV-----PSF  282 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~-~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~----~~~-----~~~  282 (365)
                         .     .+.+..+. +....|+.||++.+.+++.++.+ .    ++++++.++|+.+-.+..    ...     ...
T Consensus       142 ---~-----~~~E~~~~~p~~~~Y~~sK~~~e~~~~~~~~~-~----~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~  208 (348)
T 1ek6_A          142 ---L-----PLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQA-D----KTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNL  208 (348)
T ss_dssp             ---S-----SBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHH-C----TTCEEEEEEECEEECCCTTSSCCCCCSSSCCSH
T ss_pred             ---C-----CcCCCCCCCCCCCchHHHHHHHHHHHHHHHhc-C----CCcceEEEeeccccCCCcccccCcCcccchhhH
Confidence               0     01111222 23678999999999999999876 2    579999999999876631    100     111


Q ss_pred             HHHHHHHHH---HH---------------hcCCCCHHHHHHHHHHHhcCCCCCcc-cEEeCCCCccc
Q 017812          283 LSLMAFTVL---KL---------------LGLLQSPEKGINSVLDAALAPPETSG-VYFFGGKGRTV  330 (365)
Q Consensus       283 ~~~~~~~~~---~~---------------~~~~~~p~e~A~~i~~~~l~~~~~~G-~~~~~~~g~~~  330 (365)
                      .........   .+               ...+..++|+|++++.++.......| ..|...+++++
T Consensus       209 ~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~~~~  275 (348)
T 1ek6_A          209 MPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGY  275 (348)
T ss_dssp             HHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCE
T ss_pred             HHHHHHHHHhcCCCeEEeCCcccCCCCceEEeeEEHHHHHHHHHHHHhcccccCCceEEEeCCCCCc
Confidence            111111111   00               01235689999999976654332333 67776767665

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.88  E-value=9.2e-23  Score=181.79  Aligned_cols=215  Identities=14%  Similarity=0.002  Sum_probs=147.9

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHC--CCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSRE--GFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~--G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      +++++++||||+|+||++++++|+++  |++|++++|++++.++.         ..++.++.+|++|.+++.++++    
T Consensus         2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~---------~~~~~~~~~D~~d~~~~~~~~~----   68 (253)
T 1xq6_A            2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI---------GGEADVFIGDITDADSINPAFQ----   68 (253)
T ss_dssp             CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT---------TCCTTEEECCTTSHHHHHHHHT----
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc---------CCCeeEEEecCCCHHHHHHHHc----
Confidence            35789999999999999999999999  89999999997665432         2356789999999988877653    


Q ss_pred             HHhccCCCCCeeEEEecCCcccCC-----------CCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCC
Q 017812          135 WLLDSDMHSSIQLLINNAGILATS-----------SRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSF  203 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~~~-----------~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~  203 (365)
                               .+|+||||||.....           .+...+.+++.+++|+.++..+++++.+.    + .++||++||.
T Consensus        69 ---------~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~iv~~SS~  134 (253)
T 1xq6_A           69 ---------GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA----G-VKHIVVVGSM  134 (253)
T ss_dssp             ---------TCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH----T-CSEEEEEEET
T ss_pred             ---------CCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHc----C-CCEEEEEcCc
Confidence                     389999999975321           11123444578899999999999888654    2 4799999998


Q ss_pred             cccccccccCCCccccccccccCCCCC--hhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh
Q 017812          204 THRNVFNAQVNNETITGKFFLRSKCYP--CARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS  281 (365)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~  281 (365)
                      ++....                 .+..  ....|+.+|++++.+.+          ..|+++++++||++.++.......
T Consensus       135 ~~~~~~-----------------~~~~~~~~~~y~~sK~~~e~~~~----------~~~i~~~~vrpg~v~~~~~~~~~~  187 (253)
T 1xq6_A          135 GGTNPD-----------------HPLNKLGNGNILVWKRKAEQYLA----------DSGTPYTIIRAGGLLDKEGGVREL  187 (253)
T ss_dssp             TTTCTT-----------------CGGGGGGGCCHHHHHHHHHHHHH----------TSSSCEEEEEECEEECSCSSSSCE
T ss_pred             cCCCCC-----------------CccccccchhHHHHHHHHHHHHH----------hCCCceEEEecceeecCCcchhhh
Confidence            865100                 1111  11347779999887763          358999999999999875421100


Q ss_pred             HHHHHHHHHHHHhcCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCC
Q 017812          282 FLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKG  327 (365)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g  327 (365)
                      ....... ......++.+++|+|+++++++.. +...|..|...++
T Consensus       188 ~~~~~~~-~~~~~~~~~~~~Dva~~~~~~~~~-~~~~g~~~~i~~~  231 (253)
T 1xq6_A          188 LVGKDDE-LLQTDTKTVPRADVAEVCIQALLF-EEAKNKAFDLGSK  231 (253)
T ss_dssp             EEESTTG-GGGSSCCEEEHHHHHHHHHHHTTC-GGGTTEEEEEEEC
T ss_pred             hccCCcC-CcCCCCcEEcHHHHHHHHHHHHcC-ccccCCEEEecCC
Confidence            0000000 000112457999999999975543 3345666655554

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.88  E-value=2.5e-22  Score=193.33  Aligned_cols=239  Identities=13%  Similarity=0.084  Sum_probs=160.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCch---hHHHHHHHHHhhcC-------CCceEEEEecCCChhhH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH---LLSETMADITSRNK-------DARLEAFQVDLSSFQSV  125 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~---~~~~~~~~l~~~~~-------~~~~~~~~~Dls~~~~v  125 (365)
                      ...+++||||||+|+||++++++|++.|++|++++|+.+   ..+.+.+.+....+       ..++.++.+|++|.+++
T Consensus        66 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l  145 (427)
T 4f6c_A           66 HRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDV  145 (427)
T ss_dssp             CCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCC
T ss_pred             CCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccC
Confidence            456789999999999999999999999999999999987   44444444433211       35789999999998887


Q ss_pred             HHHHHHHHHHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017812          126 LKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  205 (365)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~  205 (365)
                      .       .       .+++|+||||||....     .+.++..+++|+.|+..+++++.+    .  .+++|++||...
T Consensus       146 ~-------~-------~~~~d~Vih~A~~~~~-----~~~~~~~~~~Nv~g~~~l~~aa~~----~--~~~~v~~SS~~~  200 (427)
T 4f6c_A          146 V-------L-------PENMDTIIHAGARTDH-----FGDDDEFEKVNVQGTVDVIRLAQQ----H--HARLIYVSTISV  200 (427)
T ss_dssp             C-------C-------SSCCSEEEECCCCC------------CHHHHHHHHHHHHHHHHHH----T--TCEEEEEEEGGG
T ss_pred             C-------C-------cCCCCEEEECCcccCC-----CCCHHHHHHHHHHHHHHHHHHHHh----c--CCcEEEECchHh
Confidence            6       1       2679999999998632     356788999999999999999977    1  479999999887


Q ss_pred             ccccccc-CCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc---h-
Q 017812          206 RNVFNAQ-VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV---P-  280 (365)
Q Consensus       206 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~---~-  280 (365)
                       ...... ...........  ..+..+...|+.||++.+.+++.++.       .|+++++++||.|.++.....   . 
T Consensus       201 -G~~~~~~~~~~~~~E~~~--~~~~~~~~~Y~~sK~~~E~~~~~~~~-------~g~~~~ivRpg~v~G~~~~~~~~~~~  270 (427)
T 4f6c_A          201 -GTYFDIDTEDVTFSEADV--YKGQLLTSPYTRSKFYSELKVLEAVN-------NGLDGRIVRVGNLTSPYNGRWHMRNI  270 (427)
T ss_dssp             -GSEECSSCSCCEECTTCS--CSSCCCCSHHHHHHHHHHHHHHHHHH-------TTCCEEEEEECCEESCSSSCCCCTTG
T ss_pred             -CCCccCCCCCcccccccc--ccCCCCCCchHHHHHHHHHHHHHHHH-------cCCCEEEEeCCeeecCCCCCccccCc
Confidence             221111 11111111100  01234678999999999999988752       589999999999987765432   0 


Q ss_pred             --hHHHHHHHHHHH----------HhcCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcccc
Q 017812          281 --SFLSLMAFTVLK----------LLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  331 (365)
Q Consensus       281 --~~~~~~~~~~~~----------~~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~~  331 (365)
                        ............          ....+..++|+|++++.++..+.  .|..|...+|+++.
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~DvA~ai~~~~~~~~--~g~~~~l~~~~~~s  331 (427)
T 4f6c_A          271 KTNRFSMVMNDLLQLDCIGVSMAEMPVDFSFVDTTARQIVALAQVNT--PQIIYHVLSPNKMP  331 (427)
T ss_dssp             GGCHHHHHHHHHHHSSEEEHHHHTCEECCEEHHHHHHHHHHHTTSCC--CCSEEEESCSCCEE
T ss_pred             chHHHHHHHHHHHhcCCCCCccccceEEEeeHHHHHHHHHHHHcCCC--CCCEEEecCCCCCc
Confidence              001111110000          01135688999999997655444  67777777777764

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.88  E-value=1.1e-21  Score=186.72  Aligned_cols=192  Identities=13%  Similarity=0.000  Sum_probs=139.0

Q ss_pred             CCEEEEecCCChHHHHHHHHHH-HCCCEEEEEecCchh---------HHHHHHHHHhhcC---CCc---eEEEEecCCCh
Q 017812           59 RPVCIVTGATSGLGAAAAYALS-REGFHVVLVGRSSHL---------LSETMADITSRNK---DAR---LEAFQVDLSSF  122 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la-~~G~~Vil~~r~~~~---------~~~~~~~l~~~~~---~~~---~~~~~~Dls~~  122 (365)
                      +++||||||+|+||++++++|+ ++|++|++++|+...         .+.+.+.+.+...   ..+   +.++.+|++|.
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~   81 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence            3579999999999999999999 999999999997654         3444333333221   124   88999999999


Q ss_pred             hhHHHHHHHHHHHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcC
Q 017812          123 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS  202 (365)
Q Consensus       123 ~~v~~~~~~~~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS  202 (365)
                      +++.+++++          ++++|+||||||.....  .+.++++..+++|+.++..+++++...    + .++||++||
T Consensus        82 ~~~~~~~~~----------~~~~d~vih~A~~~~~~--~~~~~~~~~~~~Nv~g~~~ll~a~~~~----~-~~~iv~~SS  144 (397)
T 1gy8_A           82 DFLNGVFTR----------HGPIDAVVHMCAFLAVG--ESVRDPLKYYDNNVVGILRLLQAMLLH----K-CDKIIFSSS  144 (397)
T ss_dssp             HHHHHHHHH----------SCCCCEEEECCCCCCHH--HHHHCHHHHHHHHHHHHHHHHHHHHHT----T-CCEEEEEEE
T ss_pred             HHHHHHHHh----------cCCCCEEEECCCccCcC--cchhhHHHHHHHHhHHHHHHHHHHHHh----C-CCEEEEECC
Confidence            988777652          25699999999975321  134667889999999999999987442    2 479999999


Q ss_pred             CcccccccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCc
Q 017812          203 FTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNI  275 (365)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~  275 (365)
                      .+.+........  ......+.+..+..+...|+.||++.+.+++.++.++      |+++++++||.+..+.
T Consensus       145 ~~v~g~~~~~~~--~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~------gi~~~ilRp~~v~G~~  209 (397)
T 1gy8_A          145 AAIFGNPTMGSV--STNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY------GIKGICLRYFNACGAH  209 (397)
T ss_dssp             GGGTBSCCC-------CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH------CCEEEEEEECEEECCC
T ss_pred             HHHhCCCCcccc--cccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHH------CCcEEEEeccceeCCC
Confidence            776532210000  0000111222344556799999999999999999875      7999999999997764

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.88  E-value=1.1e-21  Score=183.30  Aligned_cols=239  Identities=12%  Similarity=0.045  Sum_probs=161.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCC--CEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREG--FHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  133 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G--~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~  133 (365)
                      ++++++|+||||||+||.+++++|+++|  ++|+..+|.....  ....+.......++.++.+|++|.+++.++++.. 
T Consensus        21 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-   97 (346)
T 4egb_A           21 QSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSG--NLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKER-   97 (346)
T ss_dssp             ---CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTC--CGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHH-
T ss_pred             ccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEecccccc--chhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhc-
Confidence            4678899999999999999999999999  6888888764211  0112222222457899999999999988887642 


Q ss_pred             HHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          134 QWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       134 ~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                                ++|+|||+||....  ..+.++.+..+++|+.++..+++++...    + .+++|++||.+.+...... 
T Consensus        98 ----------~~d~Vih~A~~~~~--~~~~~~~~~~~~~nv~~~~~ll~a~~~~----~-~~~~v~~SS~~vy~~~~~~-  159 (346)
T 4egb_A           98 ----------DVQVIVNFAAESHV--DRSIENPIPFYDTNVIGTVTLLELVKKY----P-HIKLVQVSTDEVYGSLGKT-  159 (346)
T ss_dssp             ----------TCCEEEECCCCC-----------CHHHHHHTHHHHHHHHHHHHS----T-TSEEEEEEEGGGGCCCCSS-
T ss_pred             ----------CCCEEEECCcccch--hhhhhCHHHHHHHHHHHHHHHHHHHHhc----C-CCEEEEeCchHHhCCCCcC-
Confidence                      49999999998643  2245667889999999999999988654    2 4699999998766432111 


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHH-H
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVL-K  292 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~-~  292 (365)
                             ..+.+..+..+...|+.||++.+.+++.++.+.      |++++.++||.+.++................. .
T Consensus       160 -------~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~------g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~  226 (346)
T 4egb_A          160 -------GRFTEETPLAPNSPYSSSKASADMIALAYYKTY------QLPVIVTRCSNNYGPYQYPEKLIPLMVTNALEGK  226 (346)
T ss_dssp             -------CCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH------CCCEEEEEECEEESTTCCTTSHHHHHHHHHHTTC
T ss_pred             -------CCcCCCCCCCCCChhHHHHHHHHHHHHHHHHHh------CCCEEEEeecceeCcCCCccchHHHHHHHHHcCC
Confidence                   111222455667889999999999999998764      68899999999988765322111111110000 0


Q ss_pred             Hhc---------CCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017812          293 LLG---------LLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  330 (365)
Q Consensus       293 ~~~---------~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~  330 (365)
                      +..         .+..++|+|++++.++..+.  .|..|...++++.
T Consensus       227 ~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~--~g~~~~i~~~~~~  271 (346)
T 4egb_A          227 KLPLYGDGLNVRDWLHVTDHCSAIDVVLHKGR--VGEVYNIGGNNEK  271 (346)
T ss_dssp             CCEEETTSCCEECEEEHHHHHHHHHHHHHHCC--TTCEEEECCSCCE
T ss_pred             CceeeCCCCeEEeeEEHHHHHHHHHHHHhcCC--CCCEEEECCCCce
Confidence            110         12358999999997665443  6777777777766

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.88  E-value=4.4e-22  Score=183.30  Aligned_cols=226  Identities=15%  Similarity=0.064  Sum_probs=160.6

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhcc
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  139 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~  139 (365)
                      ++|+||||+|+||++++++|+++|++|++++|+.+...+..        ...+.++.+|++|.+ +.+.+          
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~~~~~~~~~Dl~d~~-~~~~~----------   61 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV--------NPSAELHVRDLKDYS-WGAGI----------   61 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS--------CTTSEEECCCTTSTT-TTTTC----------
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc--------CCCceEEECccccHH-HHhhc----------
Confidence            36999999999999999999999999999999875432211        346789999999987 54322          


Q ss_pred             CCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcccc
Q 017812          140 DMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETIT  219 (365)
Q Consensus       140 ~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~~~  219 (365)
                         .. |+|||+||...  ...+.++++..+++|+.++..+++++...    + .++||++||.+.+.....        
T Consensus        62 ---~~-d~vih~A~~~~--~~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~-~~~iv~~SS~~vyg~~~~--------  122 (312)
T 3ko8_A           62 ---KG-DVVFHFAANPE--VRLSTTEPIVHFNENVVATFNVLEWARQT----G-VRTVVFASSSTVYGDADV--------  122 (312)
T ss_dssp             ---CC-SEEEECCSSCS--SSGGGSCHHHHHHHHHHHHHHHHHHHHHH----T-CCEEEEEEEGGGGCSCSS--------
T ss_pred             ---CC-CEEEECCCCCC--chhhhhCHHHHHHHHHHHHHHHHHHHHHc----C-CCEEEEeCcHHHhCCCCC--------
Confidence               23 99999999642  23456677889999999999999988543    2 469999999887643211        


Q ss_pred             ccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHH--HHh---
Q 017812          220 GKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVL--KLL---  294 (365)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~--~~~---  294 (365)
                       ..+.+..+..+...|+.||++.+.+++.++.++      |++++.++||.+.++........ ........  .++   
T Consensus       123 -~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~------g~~~~~lrp~~v~g~~~~~~~~~-~~~~~~~~~~~~~~~~  194 (312)
T 3ko8_A          123 -IPTPEEEPYKPISVYGAAKAAGEVMCATYARLF------GVRCLAVRYANVVGPRLRHGVIY-DFIMKLRRNPNVLEVL  194 (312)
T ss_dssp             -SSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH------CCEEEEEEECEEECTTCCSSHHH-HHHHHHHHCTTEEEEC
T ss_pred             -CCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh------CCCEEEEeeccccCcCCCCChHH-HHHHHHHhCCCCeEEc
Confidence             111122455667899999999999999999875      79999999999999875431110 11111100  011   


Q ss_pred             ------cCCCCHHHHHHHHHHHhcCC--CCCcccEEeCCCCcccc
Q 017812          295 ------GLLQSPEKGINSVLDAALAP--PETSGVYFFGGKGRTVN  331 (365)
Q Consensus       295 ------~~~~~p~e~A~~i~~~~l~~--~~~~G~~~~~~~g~~~~  331 (365)
                            ..+..++|+|++++.++...  +...|..|...+|++..
T Consensus       195 ~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~ni~~~~~~s  239 (312)
T 3ko8_A          195 GDGTQRKSYLYVRDAVEATLAAWKKFEEMDAPFLALNVGNVDAVR  239 (312)
T ss_dssp             ----CEECEEEHHHHHHHHHHHHHHHHHSCCSEEEEEESCSSCEE
T ss_pred             CCCCeEEeeEEHHHHHHHHHHHHHhccccCCCCcEEEEcCCCcee
Confidence                  12345999999999766541  23456777777777663

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.88  E-value=3.2e-21  Score=182.69  Aligned_cols=237  Identities=11%  Similarity=-0.000  Sum_probs=155.9

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchh-----HHHHHHHHHhhcCCC-ceEEEEecCCChhhHHHHHHHHH
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHL-----LSETMADITSRNKDA-RLEAFQVDLSSFQSVLKFKDSLQ  133 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~-----~~~~~~~l~~~~~~~-~~~~~~~Dls~~~~v~~~~~~~~  133 (365)
                      |+||||||+|+||.+++++|+++|++|++++|+.+.     ++.+.+++...  +. ++.++.+|++|.+++.++++.+ 
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~-  105 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNV--NKALMKLHYADLTDASSLRRWIDVI-  105 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC----------CCEEEEECCTTCHHHHHHHHHHH-
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccc--cccceEEEECCCCCHHHHHHHHHhc-
Confidence            789999999999999999999999999999998653     22222221111  12 6889999999999888877643 


Q ss_pred             HHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          134 QWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       134 ~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                                ++|+|||+||....  ..+.++++..+++|+.++..+++++.+...+++..++||++||.+.+...... 
T Consensus       106 ----------~~d~Vih~A~~~~~--~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~~-  172 (381)
T 1n7h_A          106 ----------KPDEVYNLAAQSHV--AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPP-  172 (381)
T ss_dssp             ----------CCSEEEECCSCCCH--HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSS-
T ss_pred             ----------CCCEEEECCcccCc--cccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCCC-
Confidence                      48999999997532  12346678899999999999999999987653224799999998866332211 


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccc-cch-hHHH-HHHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMR-EVP-SFLS-LMAFTV  290 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~-~~~-~~~~-~~~~~~  290 (365)
                               ..+..+..+...|+.||++.+.+++.++.++.      +.+..+.|+.+..|... ... .... ......
T Consensus       173 ---------~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~------~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~  237 (381)
T 1n7h_A          173 ---------QSETTPFHPRSPYAASKCAAHWYTVNYREAYG------LFACNGILFNHESPRRGENFVTRKITRALGRIK  237 (381)
T ss_dssp             ---------BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHC------CEEEEEEECCEECTTSCTTSHHHHHHHHHHHHH
T ss_pred             ---------CCCCCCCCCCCchHHHHHHHHHHHHHHHHHhC------CcEEEEEeCceeCCCCCCcchhHHHHHHHHHHH
Confidence                     11123455677899999999999999988763      44444444433332211 110 0000 000000


Q ss_pred             HH-----------HhcCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017812          291 LK-----------LLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  330 (365)
Q Consensus       291 ~~-----------~~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~  330 (365)
                      ..           ....+..++|+|++++.++..+.  . ..|...+|++.
T Consensus       238 ~g~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~--~-~~~~i~~~~~~  285 (381)
T 1n7h_A          238 VGLQTKLFLGNLQASRDWGFAGDYVEAMWLMLQQEK--P-DDYVVATEEGH  285 (381)
T ss_dssp             HTSCCCEEESCTTCEEECEEHHHHHHHHHHHHTSSS--C-CEEEECCSCEE
T ss_pred             cCCCCeEEeCCCCceeeeEEHHHHHHHHHHHHhCCC--C-CeEEeeCCCCC
Confidence            00           01135679999999996654332  2 45555666665

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.88  E-value=1.6e-22  Score=227.74  Aligned_cols=175  Identities=16%  Similarity=0.182  Sum_probs=137.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCE-EEEEecCchhH---HHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFH-VVLVGRSSHLL---SETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  133 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~-Vil~~r~~~~~---~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~  133 (365)
                      .+|+++||||++|||+++|+.|+++|++ |++++|+..+.   .+..+++...  +.++.++.||++|.++++++++++.
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~--g~~v~~~~~Dvsd~~~v~~~~~~~~ 1960 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQ--GVQVLVSTSNASSLDGARSLITEAT 1960 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHT--TCEEEEECCCSSSHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhC--CCEEEEEecCCCCHHHHHHHHHHHH
Confidence            5899999999999999999999999995 88999986543   3445555443  5688999999999999999999886


Q ss_pred             HHHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017812          134 QWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  211 (365)
Q Consensus       134 ~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~  211 (365)
                      +       .++||+||||||+..  +..+++.++|++++++|+.|++++.+++.+.|.+   .|+||++||.++.     
T Consensus      1961 ~-------~g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~---~g~iV~iSS~ag~----- 2025 (2512)
T 2vz8_A         1961 Q-------LGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPE---LDYFVIFSSVSCG----- 2025 (2512)
T ss_dssp             H-------HSCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTT---CCEEEEECCHHHH-----
T ss_pred             h-------cCCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhccc---CCEEEEecchhhc-----
Confidence            4       378999999999863  4567899999999999999999999999998865   3799999999998     


Q ss_pred             cCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcc
Q 017812          212 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVV  271 (365)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v  271 (365)
                                     .+.+++..|++||+++++|++.++.+       |+...++..|.+
T Consensus      2026 ---------------~g~~g~~~Y~aaKaal~~l~~~rr~~-------Gl~~~a~~~g~~ 2063 (2512)
T 2vz8_A         2026 ---------------RGNAGQANYGFANSAMERICEKRRHD-------GLPGLAVQWGAI 2063 (2512)
T ss_dssp             ---------------TTCTTCHHHHHHHHHHHHHHHHHHHT-------TSCCCEEEECCB
T ss_pred             ---------------CCCCCcHHHHHHHHHHHHHHHHHHHC-------CCcEEEEEccCc
Confidence                           78889999999999999999987753       555666666654

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.88  E-value=3.7e-21  Score=179.49  Aligned_cols=240  Identities=13%  Similarity=0.050  Sum_probs=159.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCC-------CEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREG-------FHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKF  128 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G-------~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~  128 (365)
                      .+++++|+||||+|+||.+++++|+++|       ++|++++|+.+...+        ....++.++.+|++|.+++.++
T Consensus        11 ~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~--------~~~~~~~~~~~Dl~d~~~~~~~   82 (342)
T 2hrz_A           11 YFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA--------GFSGAVDARAADLSAPGEAEKL   82 (342)
T ss_dssp             CCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT--------TCCSEEEEEECCTTSTTHHHHH
T ss_pred             CccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc--------ccCCceeEEEcCCCCHHHHHHH
Confidence            4678999999999999999999999999       899999998653211        1145788999999999988776


Q ss_pred             HHHHHHHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccc
Q 017812          129 KDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNV  208 (365)
Q Consensus       129 ~~~~~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~  208 (365)
                      ++            +++|+||||||....   .+.+++++.+++|+.|+..+++++.+...+.+..++||++||.+.+..
T Consensus        83 ~~------------~~~d~vih~A~~~~~---~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~  147 (342)
T 2hrz_A           83 VE------------ARPDVIFHLAAIVSG---EAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGA  147 (342)
T ss_dssp             HH------------TCCSEEEECCCCCHH---HHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCS
T ss_pred             Hh------------cCCCEEEECCccCcc---cccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCC
Confidence            53            259999999997532   235678899999999999999999876432111379999999977633


Q ss_pred             ccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEec--CCcccCCccccchhHHHHH
Q 017812          209 FNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD--PGVVKTNIMREVPSFLSLM  286 (365)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~--PG~v~T~~~~~~~~~~~~~  286 (365)
                      ...    .     .+.+..+..+...|+.||++.+.+++.++.+... ....+++..+.  ||.+.++...-........
T Consensus       148 ~~~----~-----~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~-~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~  217 (342)
T 2hrz_A          148 PLP----Y-----PIPDEFHTTPLTSYGTQKAICELLLSDYSRRGFF-DGIGIRLPTICIRPGKPNAAASGFFSNILREP  217 (342)
T ss_dssp             SCC----S-----SBCTTCCCCCSSHHHHHHHHHHHHHHHHHHTTSC-EEEEEEECEETTCCSSCCCSGGGHHHHHHHHH
T ss_pred             CCC----C-----CcCCCCCCCCcchHHHHHHHHHHHHHHHHHhcCC-CceeEEeeeEEecCCCCcchhHHHHHHHHHHH
Confidence            211    0     1111234445678999999999999998875320 02335566655  7766544321111111000


Q ss_pred             HHHHH---HHhc-----CCCCHHHHHHHHHHHhcCCCC--CcccEEeCCCCccc
Q 017812          287 AFTVL---KLLG-----LLQSPEKGINSVLDAALAPPE--TSGVYFFGGKGRTV  330 (365)
Q Consensus       287 ~~~~~---~~~~-----~~~~p~e~A~~i~~~~l~~~~--~~G~~~~~~~g~~~  330 (365)
                       ....   .+.+     .+..++|+|++++.++..+..  ..|..|... |++.
T Consensus       218 -~~~~~~~~~~~~~~~~~~~~v~Dva~~~~~~~~~~~~~~~~~~~~ni~-g~~~  269 (342)
T 2hrz_A          218 -LVGQEAVLPVPESIRHWHASPRSAVGFLIHGAMIDVEKVGPRRNLSMP-GLSA  269 (342)
T ss_dssp             -HTTCCEEECSCTTCEEEEECHHHHHHHHHHHHHSCHHHHCSCCEEECC-CEEE
T ss_pred             -hcCCCeeccCCCccceeeEehHHHHHHHHHHHhccccccCCccEEEcC-CCCC
Confidence             0000   0011     135799999999976654432  235566553 4444

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.88  E-value=1.8e-21  Score=181.08  Aligned_cols=246  Identities=14%  Similarity=0.028  Sum_probs=157.2

Q ss_pred             CCCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHH
Q 017812           53 PITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  132 (365)
Q Consensus        53 ~~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~  132 (365)
                      +...+++++|+||||+|+||++++++|+++|++|++++|+.....+.   +..   -.++.++.+|++|.++++++++. 
T Consensus        15 ~~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---l~~---~~~~~~~~~Dl~d~~~~~~~~~~-   87 (333)
T 2q1w_A           15 VPRGSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREH---LKD---HPNLTFVEGSIADHALVNQLIGD-   87 (333)
T ss_dssp             ------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGG---SCC---CTTEEEEECCTTCHHHHHHHHHH-
T ss_pred             eeecCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhh---Hhh---cCCceEEEEeCCCHHHHHHHHhc-
Confidence            34457889999999999999999999999999999999986432111   100   13688999999999988877653 


Q ss_pred             HHHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017812          133 QQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       133 ~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~  212 (365)
                                .++|+||||||.....   +.++.+  +++|+.++..+++++.+.    + .++||++||.+.+......
T Consensus        88 ----------~~~D~vih~A~~~~~~---~~~~~~--~~~N~~~~~~l~~a~~~~----~-~~~iV~~SS~~~~g~~~~~  147 (333)
T 2q1w_A           88 ----------LQPDAVVHTAASYKDP---DDWYND--TLTNCVGGSNVVQAAKKN----N-VGRFVYFQTALCYGVKPIQ  147 (333)
T ss_dssp             ----------HCCSEEEECCCCCSCT---TCHHHH--HHHHTHHHHHHHHHHHHT----T-CSEEEEEEEGGGGCSCCCS
T ss_pred             ----------cCCcEEEECceecCCC---ccCChH--HHHHHHHHHHHHHHHHHh----C-CCEEEEECcHHHhCCCccc
Confidence                      2599999999986432   334444  999999999999999763    2 4799999998765310000


Q ss_pred             CCCccccccccccCCCCChhhhhhhhHHHHHHHHHH-HHHHhCCCCCCCeEEEEecCCcccCCccc-cc-hhHHHHHHHH
Q 017812          213 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYE-LHRNLGLDKSRHVSVIAADPGVVKTNIMR-EV-PSFLSLMAFT  289 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~-la~e~~~~~~~gi~v~~v~PG~v~T~~~~-~~-~~~~~~~~~~  289 (365)
                      ... .     +.+.. .+....|+.||++.+.+++. ++           .++.++|+.+..+... .. +.........
T Consensus       148 ~~~-~-----~~E~~-~p~~~~Y~~sK~~~E~~~~~s~~-----------~~~ilR~~~v~gp~~~~~~~~~~~~~~~~~  209 (333)
T 2q1w_A          148 QPV-R-----LDHPR-NPANSSYAISKSANEDYLEYSGL-----------DFVTFRLANVVGPRNVSGPLPIFFQRLSEG  209 (333)
T ss_dssp             SSB-C-----TTSCC-CCTTCHHHHHHHHHHHHHHHHTC-----------CEEEEEESEEESTTCCSSHHHHHHHHHHTT
T ss_pred             CCC-C-----cCCCC-CCCCCchHHHHHHHHHHHHhhhC-----------CeEEEeeceEECcCCcCcHHHHHHHHHHcC
Confidence            000 0     01111 22227899999999998876 43           4667888877665521 11 1111000000


Q ss_pred             H----HHHhcCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccccCCcccCCHHHHHHHHHHHHHhhhcc
Q 017812          290 V----LKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFNSKLAGELWTTSCNLFINS  356 (365)
Q Consensus       290 ~----~~~~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~~~~~~~~d~~~~~~lw~~~~~~~~~~  356 (365)
                      .    ..+...+..++|+|++++.++..+.   |..|...+|+++.          .+.+.+...+.++..
T Consensus       210 ~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~---g~~~~v~~~~~~s----------~~e~~~~i~~~~g~~  267 (333)
T 2q1w_A          210 KKCFVTKARRDFVFVKDLARATVRAVDGVG---HGAYHFSSGTDVA----------IKELYDAVVEAMALP  267 (333)
T ss_dssp             CCCEEEECEECEEEHHHHHHHHHHHHTTCC---CEEEECSCSCCEE----------HHHHHHHHHHHTTCS
T ss_pred             CeeeCCCceEeeEEHHHHHHHHHHHHhcCC---CCEEEeCCCCCcc----------HHHHHHHHHHHhCCC
Confidence            0    0011245689999999997654433   7778777777663          224555555555443

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.88  E-value=1.2e-20  Score=179.86  Aligned_cols=198  Identities=14%  Similarity=0.096  Sum_probs=139.9

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHH----------------HHHHHHHhhcCCCceEEEEecCC
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLS----------------ETMADITSRNKDARLEAFQVDLS  120 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~----------------~~~~~l~~~~~~~~~~~~~~Dls  120 (365)
                      .++..||||||+|.||.+++++|+++|++|++++|+.....                +...++.... +.++.++.+|++
T Consensus         9 ~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~v~~~~~Dl~   87 (404)
T 1i24_A            9 HHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALT-GKSIELYVGDIC   87 (404)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHH-CCCCEEEESCTT
T ss_pred             cCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhcc-CCceEEEECCCC
Confidence            46889999999999999999999999999999998754321                1111111111 346889999999


Q ss_pred             ChhhHHHHHHHHHHHHhccCCCCCeeEEEecCCcccCC-CCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEE
Q 017812          121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATS-SRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVN  199 (365)
Q Consensus       121 ~~~~v~~~~~~~~~~~~~~~~~~~id~lv~nAG~~~~~-~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~  199 (365)
                      |.+++.++++..           ++|+||||||..... ...+++.++..+++|+.|+..+++++.+.-.    ..+||+
T Consensus        88 d~~~~~~~~~~~-----------~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~----~~~~V~  152 (404)
T 1i24_A           88 DFEFLAESFKSF-----------EPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGE----ECHLVK  152 (404)
T ss_dssp             SHHHHHHHHHHH-----------CCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCT----TCEEEE
T ss_pred             CHHHHHHHHhcc-----------CCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCC----CcEEEE
Confidence            999888876643           499999999975322 1235666778999999999999999876421    149999


Q ss_pred             EcCCcccccccccCCCccccccc----cccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCc
Q 017812          200 VTSFTHRNVFNAQVNNETITGKF----FLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNI  275 (365)
Q Consensus       200 vsS~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~  275 (365)
                      +||.+.+.......+.+.+....    .....+..+...|+.||++.+.+++.++.++      |+++++++||.|.+|.
T Consensus       153 ~SS~~vyg~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~------gi~~~ivrp~~v~Gp~  226 (404)
T 1i24_A          153 LGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW------GIRATDLNQGVVYGVK  226 (404)
T ss_dssp             ECCGGGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH------CCEEEEEEECEEECSC
T ss_pred             eCcHHHhCCCCCCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhc------CCeEEEEecceeeCCC
Confidence            99987664322212111100000    0000244556789999999999999998764      7999999999998875


Q ss_pred             c
Q 017812          276 M  276 (365)
Q Consensus       276 ~  276 (365)
                      .
T Consensus       227 ~  227 (404)
T 1i24_A          227 T  227 (404)
T ss_dssp             C
T ss_pred             C
Confidence            4

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.87  E-value=8e-22  Score=183.82  Aligned_cols=221  Identities=17%  Similarity=0.134  Sum_probs=150.8

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhcc
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  139 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~  139 (365)
                      .+|+||||+|+||++++++|+++|++|++++|+.++.++    +.    ..++.++.+|++|.+++.++++         
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----l~----~~~~~~~~~Dl~d~~~~~~~~~---------   76 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQR----LA----YLEPECRVAEMLDHAGLERALR---------   76 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGG----GG----GGCCEEEECCTTCHHHHHHHTT---------
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhh----hc----cCCeEEEEecCCCHHHHHHHHc---------
Confidence            479999999999999999999999999999998765432    11    1257889999999988766542         


Q ss_pred             CCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcccc
Q 017812          140 DMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETIT  219 (365)
Q Consensus       140 ~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~~~  219 (365)
                          ++|+|||+||...    .+.++.++.+++|+.++..+++++.+.    + .++||++||.+.+.........    
T Consensus        77 ----~~d~vih~a~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~~----~-~~~~v~~SS~~~~~~~~~~~~~----  139 (342)
T 2x4g_A           77 ----GLDGVIFSAGYYP----SRPRRWQEEVASALGQTNPFYAACLQA----R-VPRILYVGSAYAMPRHPQGLPG----  139 (342)
T ss_dssp             ----TCSEEEEC----------------CHHHHHHHHHHHHHHHHHHH----T-CSCEEEECCGGGSCCCTTSSCB----
T ss_pred             ----CCCEEEECCccCc----CCCCCHHHHHHHHHHHHHHHHHHHHHc----C-CCeEEEECCHHhhCcCCCCCCC----
Confidence                4999999999753    234567889999999999999999875    1 4799999998876433220000    


Q ss_pred             ccccccCCCCCh----hhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcc-c-cchhHHHHHHHHHHHH
Q 017812          220 GKFFLRSKCYPC----ARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIM-R-EVPSFLSLMAFTVLKL  293 (365)
Q Consensus       220 ~~~~~~~~~~~~----~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~-~-~~~~~~~~~~~~~~~~  293 (365)
                          .+..+..+    ...|+.||++.+.+++.++.      . |+++++++||.+.++.. + ..+....... ....+
T Consensus       140 ----~E~~~~~p~~~~~~~Y~~sK~~~e~~~~~~~~------~-g~~~~ilrp~~v~g~~~~~~~~~~~~~~~~-~~~~~  207 (342)
T 2x4g_A          140 ----HEGLFYDSLPSGKSSYVLCKWALDEQAREQAR------N-GLPVVIGIPGMVLGELDIGPTTGRVITAIG-NGEMT  207 (342)
T ss_dssp             ----CTTCCCSSCCTTSCHHHHHHHHHHHHHHHHHH------T-TCCEEEEEECEEECSCCSSCSTTHHHHHHH-TTCCC
T ss_pred             ----CCCCCCCccccccChHHHHHHHHHHHHHHHhh------c-CCcEEEEeCCceECCCCccccHHHHHHHHH-cCCCc
Confidence                01123333    67899999999999998874      4 79999999999998865 2 1221111100 00000


Q ss_pred             -h--c--CCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCc
Q 017812          294 -L--G--LLQSPEKGINSVLDAALAPPETSGVYFFGGKGR  328 (365)
Q Consensus       294 -~--~--~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~  328 (365)
                       .  .  .+..++|+|++++.++..+. . |..|...+++
T Consensus       208 ~~~~~~~~~i~v~Dva~~~~~~~~~~~-~-g~~~~v~~~~  245 (342)
T 2x4g_A          208 HYVAGQRNVIDAAEAGRGLLMALERGR-I-GERYLLTGHN  245 (342)
T ss_dssp             EEECCEEEEEEHHHHHHHHHHHHHHSC-T-TCEEEECCEE
T ss_pred             cccCCCcceeeHHHHHHHHHHHHhCCC-C-CceEEEcCCc
Confidence             0  1  14589999999997665433 2 6777777766

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.87  E-value=1.8e-21  Score=179.43  Aligned_cols=224  Identities=14%  Similarity=0.048  Sum_probs=156.5

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhcc
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  139 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~  139 (365)
                      ++||||||+|+||++++++|+++|..|++..|+....+.       .  ...+.++.+|+++ +++.++++         
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~~-------~--~~~~~~~~~Dl~~-~~~~~~~~---------   62 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEF-------V--NEAARLVKADLAA-DDIKDYLK---------   62 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGGG-------S--CTTEEEECCCTTT-SCCHHHHT---------
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChhh-------c--CCCcEEEECcCCh-HHHHHHhc---------
Confidence            479999999999999999999999555555554432211       0  3468899999999 87776553         


Q ss_pred             CCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcccc
Q 017812          140 DMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETIT  219 (365)
Q Consensus       140 ~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~~~  219 (365)
                          ++|++||+||..  ....+.++++..+++|+.++..+++++...    + .++||++||.+.+.....        
T Consensus        63 ----~~d~vih~a~~~--~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~----~-~~~iv~~SS~~vyg~~~~--------  123 (313)
T 3ehe_A           63 ----GAEEVWHIAANP--DVRIGAENPDEIYRNNVLATYRLLEAMRKA----G-VSRIVFTSTSTVYGEAKV--------  123 (313)
T ss_dssp             ----TCSEEEECCCCC--CCC-CCCCHHHHHHHHHHHHHHHHHHHHHH----T-CCEEEEECCGGGGCSCSS--------
T ss_pred             ----CCCEEEECCCCC--ChhhhhhCHHHHHHHHHHHHHHHHHHHHHc----C-CCeEEEeCchHHhCcCCC--------
Confidence                499999999964  234456678899999999999999986543    2 479999999887633211        


Q ss_pred             ccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHH--HHh---
Q 017812          220 GKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVL--KLL---  294 (365)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~--~~~---  294 (365)
                       ..+.+..+..+...|+.||++.+.+++.++.++      |++++.++||.+.++...... ..........  .+.   
T Consensus       124 -~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~------g~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~  195 (313)
T 3ehe_A          124 -IPTPEDYPTHPISLYGASKLACEALIESYCHTF------DMQAWIYRFANVIGRRSTHGV-IYDFIMKLKRNPEELEIL  195 (313)
T ss_dssp             -SSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHT------TCEEEEEECSCEESTTCCCSH-HHHHHHHHHHCTTEEEES
T ss_pred             -CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhc------CCCEEEEeeccccCcCCCcCh-HHHHHHHHHcCCCceEEe
Confidence             111122456667899999999999999999863      799999999999887544211 0011111100  011   


Q ss_pred             ------cCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcccc
Q 017812          295 ------GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  331 (365)
Q Consensus       295 ------~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~~  331 (365)
                            ..+..++|+|++++.++.  +...|..|...+|+++.
T Consensus       196 ~~g~~~~~~i~v~Dva~a~~~~~~--~~~~~~~~ni~~~~~~s  236 (313)
T 3ehe_A          196 GNGEQNKSYIYISDCVDAMLFGLR--GDERVNIFNIGSEDQIK  236 (313)
T ss_dssp             TTSCCEECCEEHHHHHHHHHHHTT--CCSSEEEEECCCSCCEE
T ss_pred             CCCCeEEeEEEHHHHHHHHHHHhc--cCCCCceEEECCCCCee
Confidence                  124578999999996544  44567778778777763

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.87  E-value=4.8e-22  Score=179.16  Aligned_cols=201  Identities=18%  Similarity=0.139  Sum_probs=149.2

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhcc
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  139 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~  139 (365)
                      |+++||||+|+||++++++|+++|++|++++|+.++..           ...+.++.+|++|.+++.++++         
T Consensus         3 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----------~~~~~~~~~Dl~d~~~~~~~~~---------   62 (267)
T 3ay3_A            3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA-----------EAHEEIVACDLADAQAVHDLVK---------   62 (267)
T ss_dssp             EEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC-----------CTTEEECCCCTTCHHHHHHHHT---------
T ss_pred             ceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc-----------CCCccEEEccCCCHHHHHHHHc---------
Confidence            68999999999999999999999999999999875310           1356889999999988776653         


Q ss_pred             CCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcccc
Q 017812          140 DMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETIT  219 (365)
Q Consensus       140 ~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~~~  219 (365)
                          .+|+||||||..      +.+.++..+++|+.++..+++++.+.    + .++||++||...+.......      
T Consensus        63 ----~~d~vi~~a~~~------~~~~~~~~~~~n~~~~~~l~~a~~~~----~-~~~iv~~SS~~~~~~~~~~~------  121 (267)
T 3ay3_A           63 ----DCDGIIHLGGVS------VERPWNDILQANIIGAYNLYEAARNL----G-KPRIVFASSNHTIGYYPRTT------  121 (267)
T ss_dssp             ----TCSEEEECCSCC------SCCCHHHHHHHTHHHHHHHHHHHHHT----T-CCEEEEEEEGGGSTTSBTTS------
T ss_pred             ----CCCEEEECCcCC------CCCCHHHHHHHHHHHHHHHHHHHHHh----C-CCEEEEeCCHHHhCCCCCCC------
Confidence                389999999975      23456889999999999999998653    2 47999999988763321110      


Q ss_pred             ccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcc-cCCccccchhHHHHHHHHHHHHhcCCC
Q 017812          220 GKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVV-KTNIMREVPSFLSLMAFTVLKLLGLLQ  298 (365)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v-~T~~~~~~~~~~~~~~~~~~~~~~~~~  298 (365)
                        .+.+..+..+...|+.||++.+.+++.++.      ..|+++++++||.+ .++....              ....+.
T Consensus       122 --~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~------~~gi~~~~lrp~~v~~~~~~~~--------------~~~~~~  179 (267)
T 3ay3_A          122 --RIDTEVPRRPDSLYGLSKCFGEDLASLYYH------KFDIETLNIRIGSCFPKPKDAR--------------MMATWL  179 (267)
T ss_dssp             --CBCTTSCCCCCSHHHHHHHHHHHHHHHHHH------TTCCCEEEEEECBCSSSCCSHH--------------HHHHBC
T ss_pred             --CCCCCCCCCCCChHHHHHHHHHHHHHHHHH------HcCCCEEEEeceeecCCCCCCC--------------eeeccc
Confidence              111123445567899999999999998864      46899999999998 4543110              111356


Q ss_pred             CHHHHHHHHHHHhcCCCCCcccEEe
Q 017812          299 SPEKGINSVLDAALAPPETSGVYFF  323 (365)
Q Consensus       299 ~p~e~A~~i~~~~l~~~~~~G~~~~  323 (365)
                      +++|+|+.++.++..+....+.++.
T Consensus       180 ~~~dva~~~~~~~~~~~~~~~~~~~  204 (267)
T 3ay3_A          180 SVDDFMRLMKRAFVAPKLGCTVVYG  204 (267)
T ss_dssp             CHHHHHHHHHHHHHSSCCCEEEEEE
T ss_pred             cHHHHHHHHHHHHhCCCCCceeEec
Confidence            9999999999776554432333443

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.87  E-value=9.5e-22  Score=181.76  Aligned_cols=240  Identities=16%  Similarity=0.112  Sum_probs=147.9

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEec-CchhHHHHHHHHHhhc-CCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGR-SSHLLSETMADITSRN-KDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r-~~~~~~~~~~~l~~~~-~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      ||+||||||+|+||++++++|+++|++|++++| +.+..+.. ..+.... ...++.++.+|++|.++++++++      
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   73 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDV-SFLTNLPGASEKLHFFNADLSNPDSFAAAIE------   73 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCC-HHHHTSTTHHHHEEECCCCTTCGGGGHHHHT------
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHH-HHHHhhhccCCceEEEecCCCCHHHHHHHHc------
Confidence            578999999999999999999999999999998 65321111 1111110 01257888999999998877653      


Q ss_pred             hccCCCCCeeEEEecCCcccCCCCCCH-HHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc---
Q 017812          137 LDSDMHSSIQLLINNAGILATSSRLTP-EGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ---  212 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~~~~~~~~-~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~---  212 (365)
                             .+|+|||+|+..    ..+. +..++.+++|+.|+.++++++.+..   + .++||++||.++.......   
T Consensus        74 -------~~d~vih~A~~~----~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~---~-~~~iV~~SS~~~~~~~~~~~~~  138 (322)
T 2p4h_X           74 -------GCVGIFHTASPI----DFAVSEPEEIVTKRTVDGALGILKACVNSK---T-VKRFIYTSSGSAVSFNGKDKDV  138 (322)
T ss_dssp             -------TCSEEEECCCCC------------CHHHHHHHHHHHHHHHHHTTCS---S-CCEEEEEEEGGGTSCSSSCCSE
T ss_pred             -------CCCEEEEcCCcc----cCCCCChHHHHHHHHHHHHHHHHHHHHhcC---C-ccEEEEeccHHHcccCCCCCee
Confidence                   389999999743    1122 2245689999999999999997652   1 4799999998754321110   


Q ss_pred             CCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcccc-chhHHHHHHHHHH
Q 017812          213 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE-VPSFLSLMAFTVL  291 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~-~~~~~~~~~~~~~  291 (365)
                      .+.+......+.. ...+....|+.||++.+.+++.++.+      .|+++++++||.|.++.... .+...........
T Consensus       139 ~~e~~~~~~~~~~-~~~p~~~~Y~~sK~~~e~~~~~~~~~------~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~  211 (322)
T 2p4h_X          139 LDESDWSDVDLLR-SVKPFGWNYAVSKTLAEKAVLEFGEQ------NGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVL  211 (322)
T ss_dssp             ECTTCCCCHHHHH-HHCCTTHHHHHHHHHHHHHHHHHHHH------TTCCEEEEEECEEESCCCSSSCCHHHHHHTHHHH
T ss_pred             cCCccccchhhhc-ccCcccccHHHHHHHHHHHHHHHHHh------cCCcEEEEcCCceECCCCCCCCCchHHHHHHHHh
Confidence            1111000000000 00111126999999888777666543      58999999999999997543 2221111100000


Q ss_pred             ---HHh--c--CCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017812          292 ---KLL--G--LLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  330 (365)
Q Consensus       292 ---~~~--~--~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~  330 (365)
                         ...  .  .+..++|+|++++.++.. +..+|.| .. .++++
T Consensus       212 g~~~~~~~~~~~~i~v~Dva~a~~~~~~~-~~~~g~~-~~-~~~~~  254 (322)
T 2p4h_X          212 GKKEQIGVTRFHMVHVDDVARAHIYLLEN-SVPGGRY-NC-SPFIV  254 (322)
T ss_dssp             SCGGGCCEEEEEEEEHHHHHHHHHHHHHS-CCCCEEE-EC-CCEEE
T ss_pred             CCCccCcCCCcCEEEHHHHHHHHHHHhhC-cCCCCCE-EE-cCCCC
Confidence               001  1  257999999999976643 3356774 43 34444

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.87  E-value=6.2e-22  Score=170.93  Aligned_cols=202  Identities=14%  Similarity=0.017  Sum_probs=144.0

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhc
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  138 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~  138 (365)
                      +++++||||+|+||++++++|+++|++|++++|++++.+..        ...++.++.+|++|.+++.++++        
T Consensus         3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~--------~~~~~~~~~~D~~~~~~~~~~~~--------   66 (206)
T 1hdo_A            3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE--------GPRPAHVVVGDVLQAADVDKTVA--------   66 (206)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS--------SCCCSEEEESCTTSHHHHHHHHT--------
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc--------cCCceEEEEecCCCHHHHHHHHc--------
Confidence            47899999999999999999999999999999998654211        03468899999999988776543        


Q ss_pred             cCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCccc
Q 017812          139 SDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETI  218 (365)
Q Consensus       139 ~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~~  218 (365)
                           .+|++|||||.....   +      ..++|+.++..+++++.+.    + .+++|++||...+....        
T Consensus        67 -----~~d~vi~~a~~~~~~---~------~~~~n~~~~~~~~~~~~~~----~-~~~~v~~Ss~~~~~~~~--------  119 (206)
T 1hdo_A           67 -----GQDAVIVLLGTRNDL---S------PTTVMSEGARNIVAAMKAH----G-VDKVVACTSAFLLWDPT--------  119 (206)
T ss_dssp             -----TCSEEEECCCCTTCC---S------CCCHHHHHHHHHHHHHHHH----T-CCEEEEECCGGGTSCTT--------
T ss_pred             -----CCCEEEECccCCCCC---C------ccchHHHHHHHHHHHHHHh----C-CCeEEEEeeeeeccCcc--------
Confidence                 389999999975431   1      1248888888888877653    2 47999999987651100        


Q ss_pred             cccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcc-cCCccccchhHHHHHHHHHHHHhcCC
Q 017812          219 TGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVV-KTNIMREVPSFLSLMAFTVLKLLGLL  297 (365)
Q Consensus       219 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v-~T~~~~~~~~~~~~~~~~~~~~~~~~  297 (365)
                              ....+...|+.+|++++.+.+          ..+++++.++||.+ .++..........      ..+.+.+
T Consensus       120 --------~~~~~~~~y~~~K~~~e~~~~----------~~~i~~~~lrp~~~~~~~~~~~~~~~~~------~~~~~~~  175 (206)
T 1hdo_A          120 --------KVPPRLQAVTDDHIRMHKVLR----------ESGLKYVAVMPPHIGDQPLTGAYTVTLD------GRGPSRV  175 (206)
T ss_dssp             --------CSCGGGHHHHHHHHHHHHHHH----------HTCSEEEEECCSEEECCCCCSCCEEESS------SCSSCSE
T ss_pred             --------cccccchhHHHHHHHHHHHHH----------hCCCCEEEEeCCcccCCCCCcceEeccc------CCCCCCc
Confidence                    001157889999999988872          25799999999998 4443322211000      0010356


Q ss_pred             CCHHHHHHHHHHHhcCCCCCcccEEeCCCCc
Q 017812          298 QSPEKGINSVLDAALAPPETSGVYFFGGKGR  328 (365)
Q Consensus       298 ~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~  328 (365)
                      .+++|+|+.+++++.. +...|+.|..++|+
T Consensus       176 i~~~Dva~~~~~~~~~-~~~~g~~~~i~~g~  205 (206)
T 1hdo_A          176 ISKHDLGHFMLRCLTT-DEYDGHSTYPSHQY  205 (206)
T ss_dssp             EEHHHHHHHHHHTTSC-STTTTCEEEEECCC
T ss_pred             cCHHHHHHHHHHHhcC-ccccccceeeeccc
Confidence            7999999999965544 44568877766664

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.87  E-value=4.2e-21  Score=178.69  Aligned_cols=232  Identities=13%  Similarity=0.066  Sum_probs=159.9

Q ss_pred             EEEEecCCChHHHHHHHHHHHC---C---CEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           61 VCIVTGATSGLGAAAAYALSRE---G---FHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~---G---~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      +++||||+|+||++++++|+++   |   ++|++++|+......  +.+.......++.++.+|++|.+++.+++     
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-----   74 (337)
T 1r6d_A            2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNR--ANLAPVDADPRLRFVHGDIRDAGLLAREL-----   74 (337)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCG--GGGGGGTTCTTEEEEECCTTCHHHHHHHT-----
T ss_pred             eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCch--hhhhhcccCCCeEEEEcCCCCHHHHHHHh-----
Confidence            5999999999999999999997   8   999999996421000  01111111357889999999998876654     


Q ss_pred             HHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017812          135 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  214 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~  214 (365)
                              .++|+|||+||....  ..+.++++..+++|+.++..+++++.+..     .++||++||.+.+.....   
T Consensus        75 --------~~~d~Vih~A~~~~~--~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~-----~~~~v~~SS~~vyg~~~~---  136 (337)
T 1r6d_A           75 --------RGVDAIVHFAAESHV--DRSIAGASVFTETNVQGTQTLLQCAVDAG-----VGRVVHVSTNQVYGSIDS---  136 (337)
T ss_dssp             --------TTCCEEEECCSCCCH--HHHHHCCHHHHHHHTHHHHHHHHHHHHTT-----CCEEEEEEEGGGGCCCSS---
T ss_pred             --------cCCCEEEECCCccCc--hhhhhCHHHHHHHHHHHHHHHHHHHHHcC-----CCEEEEecchHHhCCCCC---
Confidence                    359999999997532  12345667899999999999999998762     369999999876532211   


Q ss_pred             CccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHH-HH
Q 017812          215 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVL-KL  293 (365)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~-~~  293 (365)
                            ..+.+..+..+...|+.||++.+.+++.++.++      |++++.++||.+.++................. .+
T Consensus       137 ------~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~------g~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~  204 (337)
T 1r6d_A          137 ------GSWTESSPLEPNSPYAASKAGSDLVARAYHRTY------GLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGT  204 (337)
T ss_dssp             ------SCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH------CCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCC
T ss_pred             ------CCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHH------CCCEEEEEeeeeECCCCCCCChHHHHHHHHhcCCC
Confidence                  011112345567889999999999999998764      68899999999998875321111111110000 00


Q ss_pred             h---------cCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcccc
Q 017812          294 L---------GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  331 (365)
Q Consensus       294 ~---------~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~~  331 (365)
                      .         ..+..++|+|++++.++..+  ..|..|...+|++..
T Consensus       205 ~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~--~~g~~~~v~~~~~~s  249 (337)
T 1r6d_A          205 LPLYGDGANVREWVHTDDHCRGIALVLAGG--RAGEIYHIGGGLELT  249 (337)
T ss_dssp             EEEETTSCCEEEEEEHHHHHHHHHHHHHHC--CTTCEEEECCCCEEE
T ss_pred             cEEeCCCCeeEeeEeHHHHHHHHHHHHhCC--CCCCEEEeCCCCCcc
Confidence            0         12457899999999765432  357777777777663

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.87  E-value=1e-20  Score=178.78  Aligned_cols=237  Identities=10%  Similarity=0.031  Sum_probs=157.6

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchh-----HHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHL-----LSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~-----~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      ++|+||||+|+||++++++|+++|++|++++|+.+.     ++.+.+++... ...++.++.+|++|.+++.++++.+  
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~--  101 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAH-IEGNMKLHYGDLTDSTCLVKIINEV--  101 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC----------CEEEEECCTTCHHHHHHHHHHH--
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccc-cCCCceEEEccCCCHHHHHHHHHhc--
Confidence            689999999999999999999999999999998643     22211111100 1346889999999999988877643  


Q ss_pred             HHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017812          135 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  214 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~  214 (365)
                               ++|+||||||....  ..+.++++..+++|+.++..+++++.+...+.  .++||++||.+.+......  
T Consensus       102 ---------~~d~vih~A~~~~~--~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~--~~~iv~~SS~~~~~~~~~~--  166 (375)
T 1t2a_A          102 ---------KPTEIYNLGAQSHV--KISFDLAEYTADVDGVGTLRLLDAVKTCGLIN--SVKFYQASTSELYGKVQEI--  166 (375)
T ss_dssp             ---------CCSEEEECCSCCCH--HHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTT--TCEEEEEEEGGGTCSCSSS--
T ss_pred             ---------CCCEEEECCCcccc--cccccCHHHHHHHHHHHHHHHHHHHHHhCCCc--cceEEEecchhhhCCCCCC--
Confidence                     48999999997432  11346678899999999999999998875422  3799999998876332110  


Q ss_pred             CccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcccc-ch-hHHHHHHHHHHH
Q 017812          215 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE-VP-SFLSLMAFTVLK  292 (365)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~-~~-~~~~~~~~~~~~  292 (365)
                             .+.+..+..+...|+.||++.+.+++.++.++      ++.+..+.|+.+..|.... .. ............
T Consensus       167 -------~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~------~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~  233 (375)
T 1t2a_A          167 -------PQKETTPFYPRSPYGAAKLYAYWIVVNFREAY------NLFAVNGILFNHESPRRGANFVTRKISRSVAKIYL  233 (375)
T ss_dssp             -------SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH------CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHH
T ss_pred             -------CCCccCCCCCCChhHHHHHHHHHHHHHHHHHh------CCCEEEEecccccCCCCCCCcchHHHHHHHHHHHc
Confidence                   11111344456789999999999999998765      5777778887776554321 11 100000000000


Q ss_pred             ---H---hc------CCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017812          293 ---L---LG------LLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  330 (365)
Q Consensus       293 ---~---~~------~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~  330 (365)
                         +   .+      .+..++|+|++++.++..+.  .|.| ...+++++
T Consensus       234 g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~~~~~~--~~~~-ni~~~~~~  280 (375)
T 1t2a_A          234 GQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDE--PEDF-VIATGEVH  280 (375)
T ss_dssp             TSCSCEEESCTTCEECCEEHHHHHHHHHHHHHSSS--CCCE-EECCSCCE
T ss_pred             CCCceeEeCCCCceeeeEEHHHHHHHHHHHHhcCC--CceE-EEeCCCcc
Confidence               0   01      24579999999997665433  3444 44556655

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.87  E-value=1.2e-22  Score=178.57  Aligned_cols=217  Identities=13%  Similarity=0.005  Sum_probs=152.3

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhcc
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  139 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~  139 (365)
                      ++++||||+|+||++++++|+++|++|++++|++++.+..         ...+.++.+|++|.+++.++++         
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---------~~~~~~~~~Dl~d~~~~~~~~~---------   66 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE---------NEHLKVKKADVSSLDEVCEVCK---------   66 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC---------CTTEEEECCCTTCHHHHHHHHT---------
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc---------cCceEEEEecCCCHHHHHHHhc---------
Confidence            6899999999999999999999999999999998754221         2578999999999998877653         


Q ss_pred             CCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcccc
Q 017812          140 DMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETIT  219 (365)
Q Consensus       140 ~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~~~  219 (365)
                          ++|+|||+||....        ....+++|+.++..+++++...    + .+++|++||.++..........    
T Consensus        67 ----~~d~vi~~a~~~~~--------~~~~~~~n~~~~~~l~~~~~~~----~-~~~~v~~Ss~~~~~~~~~~~~~----  125 (227)
T 3dhn_A           67 ----GADAVISAFNPGWN--------NPDIYDETIKVYLTIIDGVKKA----G-VNRFLMVGGAGSLFIAPGLRLM----  125 (227)
T ss_dssp             ----TCSEEEECCCC--------------CCSHHHHHHHHHHHHHHHT----T-CSEEEEECCSTTSEEETTEEGG----
T ss_pred             ----CCCEEEEeCcCCCC--------ChhHHHHHHHHHHHHHHHHHHh----C-CCEEEEeCChhhccCCCCCccc----
Confidence                38999999987421        1237899999999998887553    2 4699999998866332211111    


Q ss_pred             ccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc--hhHHHHHHHHHHHHhcCC
Q 017812          220 GKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV--PSFLSLMAFTVLKLLGLL  297 (365)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~--~~~~~~~~~~~~~~~~~~  297 (365)
                            ..+..+...|+.+|++.+.+.+.++.      ..|++++.++||.+.++.....  ....... ... .....+
T Consensus       126 ------~~~~~p~~~Y~~sK~~~e~~~~~~~~------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~-~~~-~~~~~~  191 (227)
T 3dhn_A          126 ------DSGEVPENILPGVKALGEFYLNFLMK------EKEIDWVFFSPAADMRPGVRTGRYRLGKDDM-IVD-IVGNSH  191 (227)
T ss_dssp             ------GTTCSCGGGHHHHHHHHHHHHHTGGG------CCSSEEEEEECCSEEESCCCCCCCEEESSBC-CCC-TTSCCE
T ss_pred             ------cCCcchHHHHHHHHHHHHHHHHHHhh------ccCccEEEEeCCcccCCCccccceeecCCCc-ccC-CCCCcE
Confidence                  13445577899999999988888765      4689999999999876543211  0000000 000 000134


Q ss_pred             CCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017812          298 QSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  330 (365)
Q Consensus       298 ~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~  330 (365)
                      .+++|+|++++.++.. +...|+.|...+.++.
T Consensus       192 i~~~Dva~ai~~~l~~-~~~~g~~~~~~~~~~~  223 (227)
T 3dhn_A          192 ISVEDYAAAMIDELEH-PKHHQERFTIGYLEHH  223 (227)
T ss_dssp             EEHHHHHHHHHHHHHS-CCCCSEEEEEECCSCC
T ss_pred             EeHHHHHHHHHHHHhC-ccccCcEEEEEeehhc
Confidence            6899999999976654 4456777765655554

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.87  E-value=4.3e-21  Score=176.70  Aligned_cols=226  Identities=14%  Similarity=0.040  Sum_probs=155.9

Q ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhccC
Q 017812           61 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  140 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~~  140 (365)
                      +++||||+|+||++++++|+++|++|++++|..+...+   .+     ...+.++.+|++|.+++.+++++         
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~---~~-----~~~~~~~~~Dl~~~~~~~~~~~~---------   64 (311)
T 2p5y_A            2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRE---NV-----PKGVPFFRVDLRDKEGVERAFRE---------   64 (311)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGG---GS-----CTTCCEECCCTTCHHHHHHHHHH---------
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchh---hc-----ccCeEEEECCCCCHHHHHHHHHh---------
Confidence            59999999999999999999999999999985432110   01     13567889999999988877653         


Q ss_pred             CCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCC-cccccccccCCCcccc
Q 017812          141 MHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSF-THRNVFNAQVNNETIT  219 (365)
Q Consensus       141 ~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~-~~~~~~~~~~~~~~~~  219 (365)
                        .++|++||+||....  ..+.++++..+++|+.|+..+++++...    + .++||++||. +.+.......      
T Consensus        65 --~~~d~vi~~a~~~~~--~~~~~~~~~~~~~N~~g~~~l~~a~~~~----~-~~~iv~~SS~~~~~g~~~~~~------  129 (311)
T 2p5y_A           65 --FRPTHVSHQAAQASV--KVSVEDPVLDFEVNLLGGLNLLEACRQY----G-VEKLVFASTGGAIYGEVPEGE------  129 (311)
T ss_dssp             --HCCSEEEECCSCCCH--HHHHHCHHHHHHHHTHHHHHHHHHHHHT----T-CSEEEEEEEHHHHHCCCCTTC------
T ss_pred             --cCCCEEEECccccCc--hhhhhCHHHHHHHHHHHHHHHHHHHHHh----C-CCEEEEeCCChhhcCCCCCCC------
Confidence              248999999997432  1234567889999999999999988542    2 4799999998 4332100000      


Q ss_pred             ccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccch--hHHHHHHHHHHH--H--
Q 017812          220 GKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP--SFLSLMAFTVLK--L--  293 (365)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~--~~~~~~~~~~~~--~--  293 (365)
                        ...+..+..+...|+.||++.+.+++.++.++      |++++.++||.+.+|......  ............  +  
T Consensus       130 --~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~------~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~  201 (311)
T 2p5y_A          130 --RAEETWPPRPKSPYAASKAAFEHYLSVYGQSY------GLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVT  201 (311)
T ss_dssp             --CBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH------CCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEE
T ss_pred             --CcCCCCCCCCCChHHHHHHHHHHHHHHHHHHc------CCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcE
Confidence              01111334456789999999999999998764      689999999999988653321  111111111000  1  


Q ss_pred             -h-----------cCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017812          294 -L-----------GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  330 (365)
Q Consensus       294 -~-----------~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~  330 (365)
                       .           ..+..++|+|++++.++..+    |..|...+|++.
T Consensus       202 ~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~----~~~~~i~~~~~~  246 (311)
T 2p5y_A          202 LYARKTPGDEGCVRDYVYVGDVAEAHALALFSL----EGIYNVGTGEGH  246 (311)
T ss_dssp             EECSSSTTSCCCEECEEEHHHHHHHHHHHHHHC----CEEEEESCSCCE
T ss_pred             EEecccCCCCCeEEeeEEHHHHHHHHHHHHhCC----CCEEEeCCCCCc
Confidence             0           12346899999999765442    667776777766

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.86  E-value=6.3e-22  Score=175.21  Aligned_cols=205  Identities=9%  Similarity=0.025  Sum_probs=136.7

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCC-CEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREG-FHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G-~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      +..|+|+||||+||||++++++|+++| ++|++++|+++++++.        ....+.++++|++|+++++++++     
T Consensus        21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~--------~~~~~~~~~~Dl~d~~~~~~~~~-----   87 (236)
T 3qvo_A           21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP--------YPTNSQIIMGDVLNHAALKQAMQ-----   87 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSS--------CCTTEEEEECCTTCHHHHHHHHT-----
T ss_pred             CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccc--------ccCCcEEEEecCCCHHHHHHHhc-----
Confidence            446899999999999999999999999 8999999998764321        13478899999999998877653     


Q ss_pred             HhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCC
Q 017812          136 LLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNN  215 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~  215 (365)
                              .+|+||||||...         +           ...++.+++.|++.+ .++||++||..++.........
T Consensus        88 --------~~D~vv~~a~~~~---------~-----------~~~~~~~~~~~~~~~-~~~iV~iSS~~~~~~~~~~~~~  138 (236)
T 3qvo_A           88 --------GQDIVYANLTGED---------L-----------DIQANSVIAAMKACD-VKRLIFVLSLGIYDEVPGKFVE  138 (236)
T ss_dssp             --------TCSEEEEECCSTT---------H-----------HHHHHHHHHHHHHTT-CCEEEEECCCCC----------
T ss_pred             --------CCCEEEEcCCCCc---------h-----------hHHHHHHHHHHHHcC-CCEEEEEecceecCCCCccccc
Confidence                    4899999998510         1           134667888888776 6899999998876332111000


Q ss_pred             ccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhc
Q 017812          216 ETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLG  295 (365)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  295 (365)
                             ............|..+|.++           .   ..||++++|+||++.|+...........     ....+
T Consensus       139 -------~~~~~~~~~~~~~~~~~~~l-----------~---~~gi~~~~vrPg~i~~~~~~~~~~~~~~-----~~~~~  192 (236)
T 3qvo_A          139 -------WNNAVIGEPLKPFRRAADAI-----------E---ASGLEYTILRPAWLTDEDIIDYELTSRN-----EPFKG  192 (236)
T ss_dssp             -------------CGGGHHHHHHHHHH-----------H---TSCSEEEEEEECEEECCSCCCCEEECTT-----SCCSC
T ss_pred             -------chhhcccchHHHHHHHHHHH-----------H---HCCCCEEEEeCCcccCCCCcceEEeccC-----CCCCC
Confidence                   00012223345565554332           2   5799999999999988765432110000     00124


Q ss_pred             CCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcc
Q 017812          296 LLQSPEKGINSVLDAALAPPETSGVYFFGGKGRT  329 (365)
Q Consensus       296 ~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~  329 (365)
                      ++.+++|+|+++++++..+....|+.|...++..
T Consensus       193 ~~i~~~DvA~~i~~ll~~~~~~~g~~~~i~~~~~  226 (236)
T 3qvo_A          193 TIVSRKSVAALITDIIDKPEKHIGENIGINQPGT  226 (236)
T ss_dssp             SEEEHHHHHHHHHHHHHSTTTTTTEEEEEECSSC
T ss_pred             cEECHHHHHHHHHHHHcCcccccCeeEEecCCCC
Confidence            5679999999999877666544577776665544

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.86  E-value=6.6e-21  Score=180.36  Aligned_cols=234  Identities=13%  Similarity=0.060  Sum_probs=156.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCC-CEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREG-FHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G-~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      .+++++|+||||+|+||++++++|+++| ++|++++|+.+...+   .+.   ...++.++.+|++|.+++.+++     
T Consensus        29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~---~l~---~~~~v~~~~~Dl~d~~~l~~~~-----   97 (377)
T 2q1s_A           29 KLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKI---NVP---DHPAVRFSETSITDDALLASLQ-----   97 (377)
T ss_dssp             GGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGG---GSC---CCTTEEEECSCTTCHHHHHHCC-----
T ss_pred             HhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchh---hcc---CCCceEEEECCCCCHHHHHHHh-----
Confidence            4678999999999999999999999999 999999998653211   110   1347889999999988765533     


Q ss_pred             HHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc-cC
Q 017812          135 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA-QV  213 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~-~~  213 (365)
                              .++|+|||+||....  ..+.++.+..+++|+.++..+++++...   .+ .++||++||.+.+..... .+
T Consensus        98 --------~~~d~Vih~A~~~~~--~~~~~~~~~~~~~nv~~~~~ll~a~~~~---~~-~~~~V~~SS~~vyg~~~~~~~  163 (377)
T 2q1s_A           98 --------DEYDYVFHLATYHGN--QSSIHDPLADHENNTLTTLKLYERLKHF---KR-LKKVVYSAAGCSIAEKTFDDA  163 (377)
T ss_dssp             --------SCCSEEEECCCCSCH--HHHHHCHHHHHHHHTHHHHHHHHHHTTC---SS-CCEEEEEEEC-----------
T ss_pred             --------hCCCEEEECCCccCc--hhhhhCHHHHHHHHHHHHHHHHHHHHHh---CC-CCeEEEeCCHHHcCCCCCCCc
Confidence                    369999999997432  1224567889999999999999988432   02 469999999876532211 11


Q ss_pred             C--CccccccccccCCCC-ChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcc---------ccc--
Q 017812          214 N--NETITGKFFLRSKCY-PCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIM---------REV--  279 (365)
Q Consensus       214 ~--~~~~~~~~~~~~~~~-~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~---------~~~--  279 (365)
                      +  .+..       ..+. .+...|+.||++.+.+++.++.++      |+++++++||.+.++..         ...  
T Consensus       164 ~~~E~~~-------~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~------gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~  230 (377)
T 2q1s_A          164 KATEETD-------IVSLHNNDSPYSMSKIFGEFYSVYYHKQH------QLPTVRARFQNVYGPGEILGAGRWRGTPATV  230 (377)
T ss_dssp             ---CCCC-------CCCSSCCCSHHHHHHHHHHHHHHHHHHHH------CCCEEEEEECCEECTTCCTTCSSCCSSGGGT
T ss_pred             Ccccccc-------cccccCCCCchHHHHHHHHHHHHHHHHHh------CCCEEEEeeccEECCCCcccccccccCcccc
Confidence            1  1100       0033 456789999999999999998764      78999999999988765         210  


Q ss_pred             -hhHHHHHHHHHH--HHh---------cCCCCHHHHHHH-HHHHhcCCCCCcccEEeCCCCccc
Q 017812          280 -PSFLSLMAFTVL--KLL---------GLLQSPEKGINS-VLDAALAPPETSGVYFFGGKGRTV  330 (365)
Q Consensus       280 -~~~~~~~~~~~~--~~~---------~~~~~p~e~A~~-i~~~~l~~~~~~G~~~~~~~g~~~  330 (365)
                       ............  .+.         ..+..++|+|++ ++.++..+.  .| .|...+++++
T Consensus       231 ~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~i~~~~~~~~--~g-~~~i~~~~~~  291 (377)
T 2q1s_A          231 WRNVTPTFIYKALKGMPLPLENGGVATRDFIFVEDVANGLIACAADGTP--GG-VYNIASGKET  291 (377)
T ss_dssp             SCSHHHHHHHHHHTTCCCCCSGGGCCEECCEEHHHHHHHHHHHHHHCCT--TE-EEECCCCCCE
T ss_pred             cccHHHHHHHHHHcCCCeEEeCCCCeEEeeEEHHHHHHHHHHHHHhcCC--CC-eEEecCCCce
Confidence             011111111000  011         123458999999 886665433  67 7777777665

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.86  E-value=5.9e-21  Score=180.83  Aligned_cols=235  Identities=12%  Similarity=0.007  Sum_probs=159.0

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      .++++|+||||+|+||++++++|+++|++|++++|+.++....      .  ..++.++.+|++|.+++.++++      
T Consensus        27 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~--~~~v~~~~~Dl~d~~~~~~~~~------   92 (379)
T 2c5a_A           27 SENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE------D--MFCDEFHLVDLRVMENCLKVTE------   92 (379)
T ss_dssp             TSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG------G--GTCSEEEECCTTSHHHHHHHHT------
T ss_pred             ccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhh------c--cCCceEEECCCCCHHHHHHHhC------
Confidence            3578999999999999999999999999999999987542210      1  2367889999999988876652      


Q ss_pred             hccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCC-
Q 017812          137 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNN-  215 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~-  215 (365)
                             ++|+|||+||..... ..+.++.++.+++|+.++..+++++...    + .++||++||.+.+......... 
T Consensus        93 -------~~d~Vih~A~~~~~~-~~~~~~~~~~~~~Nv~g~~~ll~a~~~~----~-~~~~V~~SS~~v~~~~~~~~~~~  159 (379)
T 2c5a_A           93 -------GVDHVFNLAADMGGM-GFIQSNHSVIMYNNTMISFNMIEAARIN----G-IKRFFYASSACIYPEFKQLETTN  159 (379)
T ss_dssp             -------TCSEEEECCCCCCCH-HHHTTCHHHHHHHHHHHHHHHHHHHHHT----T-CSEEEEEEEGGGSCGGGSSSSSS
T ss_pred             -------CCCEEEECceecCcc-cccccCHHHHHHHHHHHHHHHHHHHHHc----C-CCEEEEEeehheeCCCCCCCccC
Confidence                   499999999975321 1113457889999999999999998643    2 4699999998765332111000 


Q ss_pred             ccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh---HHHHHHHHHH-
Q 017812          216 ETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS---FLSLMAFTVL-  291 (365)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~---~~~~~~~~~~-  291 (365)
                      .......   ..+..+...|+.||++.+.+++.++.+.      |+++++++||.+.++.......   .......... 
T Consensus       160 ~~~~E~~---~~~~~~~~~Y~~sK~~~E~~~~~~~~~~------gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~  230 (379)
T 2c5a_A          160 VSLKESD---AWPAEPQDAFGLEKLATEELCKHYNKDF------GIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQT  230 (379)
T ss_dssp             CEECGGG---GSSBCCSSHHHHHHHHHHHHHHHHHHHH------CCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHH
T ss_pred             CCcCccc---CCCCCCCChhHHHHHHHHHHHHHHHHHH------CCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHh
Confidence            0011000   0134456789999999999999998764      6999999999998886432110   1111111100 


Q ss_pred             -HH-h---------cCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017812          292 -KL-L---------GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  330 (365)
Q Consensus       292 -~~-~---------~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~  330 (365)
                       .+ +         ..+..++|+|++++.++..+   .|..|...+++++
T Consensus       231 ~~~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~---~~~~~ni~~~~~~  277 (379)
T 2c5a_A          231 STDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSD---FREPVNIGSDEMV  277 (379)
T ss_dssp             CSSCEEEESCSCCEECCEEHHHHHHHHHHHHHSS---CCSCEEECCCCCE
T ss_pred             CCCceEEeCCCCeeEEEEEHHHHHHHHHHHhhcc---CCCeEEeCCCCcc
Confidence             01 1         12356999999999766543   3445555566655

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.86  E-value=2.4e-20  Score=173.42  Aligned_cols=235  Identities=11%  Similarity=-0.010  Sum_probs=157.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHH-HHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLS-ETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~-~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      .+++||||||+|+||++++++|+++|++|++++|+.+... ...+.+   ....++.++.+|++|.+++.++++.+    
T Consensus        13 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~~----   85 (335)
T 1rpn_A           13 MTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLREL---GIEGDIQYEDGDMADACSVQRAVIKA----   85 (335)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHT---TCGGGEEEEECCTTCHHHHHHHHHHH----
T ss_pred             cCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhc---cccCceEEEECCCCCHHHHHHHHHHc----
Confidence            3678999999999999999999999999999999875421 111111   11346889999999999988877643    


Q ss_pred             hccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017812          137 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  216 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~  216 (365)
                             ++|+|||+||....  ..+.++.+..+++|+.++..+++++.+.    +..+++|++||.+.+......    
T Consensus        86 -------~~d~Vih~A~~~~~--~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~~v~~SS~~v~g~~~~~----  148 (335)
T 1rpn_A           86 -------QPQEVYNLAAQSFV--GASWNQPVTTGVVDGLGVTHLLEAIRQF----SPETRFYQASTSEMFGLIQAE----  148 (335)
T ss_dssp             -------CCSEEEECCSCCCH--HHHTTSHHHHHHHHTHHHHHHHHHHHHH----CTTSEEEEEEEGGGGCSCSSS----
T ss_pred             -------CCCEEEECccccch--hhhhhChHHHHHHHHHHHHHHHHHHHHh----CCCCeEEEEeCHHHhCCCCCC----
Confidence                   48999999997432  1123456789999999999999998664    102699999998766332110    


Q ss_pred             cccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcccc-ch-hHHHHHHHHHHH--
Q 017812          217 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE-VP-SFLSLMAFTVLK--  292 (365)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~-~~-~~~~~~~~~~~~--  292 (365)
                           .+.+..+..+...|+.||++.+.+++.++.++      ++.++.+.|+.+..+.... .. ............  
T Consensus       149 -----~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~------~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~  217 (335)
T 1rpn_A          149 -----RQDENTPFYPRSPYGVAKLYGHWITVNYRESF------GLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGK  217 (335)
T ss_dssp             -----SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH------CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTS
T ss_pred             -----CCCcccCCCCCChhHHHHHHHHHHHHHHHHHc------CCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCC
Confidence                 11111344456789999999999999998765      5778889998887664322 11 101111000000  


Q ss_pred             -H---hc------CCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017812          293 -L---LG------LLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  330 (365)
Q Consensus       293 -~---~~------~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~  330 (365)
                       +   .+      -+..++|+|++++.++..+.  .| .|...+++++
T Consensus       218 ~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~--~~-~~ni~~~~~~  262 (335)
T 1rpn_A          218 QQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDK--AD-DYVVATGVTT  262 (335)
T ss_dssp             CSCEEESCTTCEEECEEHHHHHHHHHHHHHSSS--CC-CEEECCSCEE
T ss_pred             CceEEeCCCcceeceEEHHHHHHHHHHHHhcCC--CC-EEEEeCCCCc
Confidence             0   01      13467999999997665433  34 4455566665

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.85  E-value=1.4e-20  Score=164.23  Aligned_cols=213  Identities=15%  Similarity=0.081  Sum_probs=131.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhccC
Q 017812           61 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  140 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~~  140 (365)
                      +|+||||||+||++++++|+++|++|++++|+++++++..         ..+.++.+|++|.++     +.         
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~---------~~~~~~~~D~~d~~~-----~~---------   58 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH---------KDINILQKDIFDLTL-----SD---------   58 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC---------SSSEEEECCGGGCCH-----HH---------
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc---------CCCeEEeccccChhh-----hh---------
Confidence            5999999999999999999999999999999987654421         367899999999887     11         


Q ss_pred             CCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCccccc
Q 017812          141 MHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITG  220 (365)
Q Consensus       141 ~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~~~~  220 (365)
                       ..++|+||||||....           ...+|+.++..+    ++.+++.+ .+++|++||.++..........     
T Consensus        59 -~~~~d~vi~~ag~~~~-----------~~~~~~~~~~~l----~~a~~~~~-~~~~v~~SS~~~~~~~~~~~~~-----  116 (221)
T 3ew7_A           59 -LSDQNVVVDAYGISPD-----------EAEKHVTSLDHL----ISVLNGTV-SPRLLVVGGAASLQIDEDGNTL-----  116 (221)
T ss_dssp             -HTTCSEEEECCCSSTT-----------TTTSHHHHHHHH----HHHHCSCC-SSEEEEECCCC----------------
T ss_pred             -hcCCCEEEECCcCCcc-----------ccchHHHHHHHH----HHHHHhcC-CceEEEEecceEEEcCCCCccc-----
Confidence             1459999999998422           134466655554    45555554 5899999998876332111000     


Q ss_pred             cccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHH-HHHHHHHHhcCCCC
Q 017812          221 KFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSL-MAFTVLKLLGLLQS  299 (365)
Q Consensus       221 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~~~~~  299 (365)
                         ....+..+...|+.+|++.+.+ ..+..  .   ..|++++.++||++.++.... ...... ...........+.+
T Consensus       117 ---~~~~~~~~~~~y~~~k~~~e~~-~~~~~--~---~~gi~~~ivrp~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~i~  186 (221)
T 3ew7_A          117 ---LESKGLREAPYYPTARAQAKQL-EHLKS--H---QAEFSWTYISPSAMFEPGERT-GDYQIGKDHLLFGSDGNSFIS  186 (221)
T ss_dssp             -----------CCCSCCHHHHHHHH-HHHHT--T---TTTSCEEEEECSSCCCCC----------------------CCC
T ss_pred             ---cccCCCCCHHHHHHHHHHHHHH-HHHHh--h---ccCccEEEEeCcceecCCCcc-CceEeccccceecCCCCceEe
Confidence               0012233456799999999886 33332  1   468999999999998872111 100000 00000011124679


Q ss_pred             HHHHHHHHHHHhcCCCCCcccEEeCCCCcc
Q 017812          300 PEKGINSVLDAALAPPETSGVYFFGGKGRT  329 (365)
Q Consensus       300 p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~  329 (365)
                      ++|+|++++.++.. +...|+.|...+..+
T Consensus       187 ~~Dva~~~~~~l~~-~~~~g~~~~~~~~~~  215 (221)
T 3ew7_A          187 MEDYAIAVLDEIER-PNHLNEHFTVAGKLE  215 (221)
T ss_dssp             HHHHHHHHHHHHHS-CSCTTSEEECCC---
T ss_pred             HHHHHHHHHHHHhC-ccccCCEEEECCCCc
Confidence            99999999986655 445677777655443

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.85  E-value=1.1e-21  Score=181.05  Aligned_cols=217  Identities=13%  Similarity=0.033  Sum_probs=122.2

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhc
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  138 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~  138 (365)
                      +++|+||||+|+||++++++|+++|++|++++|+.+.            +  +  ++.+|++|.+++.++++..      
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~------------~--~--~~~~Dl~d~~~~~~~~~~~------   59 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR------------P--K--FEQVNLLDSNAVHHIIHDF------   59 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC----------------------------------CHHHHHHH------
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC------------C--C--eEEecCCCHHHHHHHHHhh------
Confidence            5789999999999999999999999999999997543            1  1  6789999998888776542      


Q ss_pred             cCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCccc
Q 017812          139 SDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETI  218 (365)
Q Consensus       139 ~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~~  218 (365)
                           ++|+|||+||....  ..+.+++++.+++|+.++..+++++.+.      +++||++||.+.+.......     
T Consensus        60 -----~~d~vih~A~~~~~--~~~~~~~~~~~~~n~~~~~~l~~a~~~~------~~~~v~~SS~~v~~~~~~~~-----  121 (315)
T 2ydy_A           60 -----QPHVIVHCAAERRP--DVVENQPDAASQLNVDASGNLAKEAAAV------GAFLIYISSDYVFDGTNPPY-----  121 (315)
T ss_dssp             -----CCSEEEECC---------------------CHHHHHHHHHHHHH------TCEEEEEEEGGGSCSSSCSB-----
T ss_pred             -----CCCEEEECCcccCh--hhhhcCHHHHHHHHHHHHHHHHHHHHHc------CCeEEEEchHHHcCCCCCCC-----
Confidence                 48999999997543  2245678899999999999999999763      25999999988764311111     


Q ss_pred             cccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccc---cc-hhHHHHHHHHHH---
Q 017812          219 TGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMR---EV-PSFLSLMAFTVL---  291 (365)
Q Consensus       219 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~---~~-~~~~~~~~~~~~---  291 (365)
                           .+..+..+...|+.||++.+.+++.++.+          +..++|+.|..+...   .+ +...........   
T Consensus       122 -----~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~----------~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  186 (315)
T 2ydy_A          122 -----REEDIPAPLNLYGKTKLDGEKAVLENNLG----------AAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSAN  186 (315)
T ss_dssp             -----CTTSCCCCCSHHHHHHHHHHHHHHHHCTT----------CEEEEECSEECSCSSGGGSTTGGGHHHHHCCSSCEE
T ss_pred             -----CCCCCCCCcCHHHHHHHHHHHHHHHhCCC----------eEEEeeeeeeCCCCcccccHHHHHHHHHHhcCCCee
Confidence                 11234455678999999999999887422          234455554433221   11 111111000000   


Q ss_pred             ---HHhcCCCCHHHHHHHHHHHhcCC--CCCcccEEeCCCCccc
Q 017812          292 ---KLLGLLQSPEKGINSVLDAALAP--PETSGVYFFGGKGRTV  330 (365)
Q Consensus       292 ---~~~~~~~~p~e~A~~i~~~~l~~--~~~~G~~~~~~~g~~~  330 (365)
                         .....+..++|+|++++.++...  ....|..|...+|+++
T Consensus       187 ~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~i~~~~~~  230 (315)
T 2ydy_A          187 MDHWQQRFPTHVKDVATVCRQLAEKRMLDPSIKGTFHWSGNEQM  230 (315)
T ss_dssp             EECSSBBCCEEHHHHHHHHHHHHHHHHTCTTCCEEEECCCSCCB
T ss_pred             eccCceECcEEHHHHHHHHHHHHHhhccccCCCCeEEEcCCCcc
Confidence               01224568999999999766432  2345667777777776

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.85  E-value=5.5e-20  Score=170.56  Aligned_cols=230  Identities=13%  Similarity=0.080  Sum_probs=158.4

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhcc
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  139 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~  139 (365)
                      ++|+||||+|+||.+++++|+++|++|++++|+.....   +.+     ..++.++.+|++|.+++.+++++        
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~-----~~~~~~~~~D~~~~~~~~~~~~~--------   65 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE---DAI-----TEGAKFYNGDLRDKAFLRDVFTQ--------   65 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG---GGS-----CTTSEEEECCTTCHHHHHHHHHH--------
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch---hhc-----CCCcEEEECCCCCHHHHHHHHhh--------
Confidence            57999999999999999999999999999999764321   111     12678999999999988777653        


Q ss_pred             CCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcccc
Q 017812          140 DMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETIT  219 (365)
Q Consensus       140 ~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~~~  219 (365)
                         .++|+|||+||.....  .+.++.+..+++|+.++..+++++...    + .+++|++||.+.+.....        
T Consensus        66 ---~~~d~vih~a~~~~~~--~~~~~~~~~~~~n~~~~~~l~~a~~~~----~-~~~~v~~Ss~~~~~~~~~--------  127 (330)
T 2c20_A           66 ---ENIEAVMHFAADSLVG--VSMEKPLQYYNNNVYGALCLLEVMDEF----K-VDKFIFSSTAATYGEVDV--------  127 (330)
T ss_dssp             ---SCEEEEEECCCCCCHH--HHHHSHHHHHHHHHHHHHHHHHHHHHT----T-CCEEEEECCGGGGCSCSS--------
T ss_pred             ---cCCCEEEECCcccCcc--ccccCHHHHHHHHhHHHHHHHHHHHHc----C-CCEEEEeCCceeeCCCCC--------
Confidence               3699999999975321  134567889999999999999987532    2 479999999876632211        


Q ss_pred             ccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcccc--------chhHHHHHHHHHH
Q 017812          220 GKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE--------VPSFLSLMAFTVL  291 (365)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~--------~~~~~~~~~~~~~  291 (365)
                       ..+.+..+..+...|+.||++.+.+++.++.+      .|++++.++||.+.++....        .............
T Consensus       128 -~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~------~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~  200 (330)
T 2c20_A          128 -DLITEETMTNPTNTYGETKLAIEKMLHWYSQA------SNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVAL  200 (330)
T ss_dssp             -SSBCTTSCCCCSSHHHHHHHHHHHHHHHHHHT------SSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHT
T ss_pred             -CCCCcCCCCCCCChHHHHHHHHHHHHHHHHHH------hCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHh
Confidence             01111234456788999999999999998864      48999999999998764211        0111111111000


Q ss_pred             H---Hh---------------cCCCCHHHHHHHHHHHhcCCCC-CcccEEeCCCCccc
Q 017812          292 K---LL---------------GLLQSPEKGINSVLDAALAPPE-TSGVYFFGGKGRTV  330 (365)
Q Consensus       292 ~---~~---------------~~~~~p~e~A~~i~~~~l~~~~-~~G~~~~~~~g~~~  330 (365)
                      .   ++               ..+..++|+|++++.++..+.. ..|..|...++++.
T Consensus       201 ~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~  258 (330)
T 2c20_A          201 GQREKIMMFGDDYNTPDGTCIRDYIHVEDLVAAHFLGLKDLQNGGESDFYNLGNGNGF  258 (330)
T ss_dssp             TSSSCEEEECSCCSSSSSSCEECEEEHHHHHHHHHHHHHHHHTTCCCEEEECCCTTCB
T ss_pred             hcCCCeEEeCCccccCCCceeEeeEeHHHHHHHHHHHHhccccCCCCCeEEeCCCCCc
Confidence            0   00               0134589999999976644322 23567776666665

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.85  E-value=1.2e-20  Score=177.11  Aligned_cols=231  Identities=13%  Similarity=0.049  Sum_probs=155.6

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHCC-CEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHH
Q 017812           54 ITGIKRPVCIVTGATSGLGAAAAYALSREG-FHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  132 (365)
Q Consensus        54 ~~~~~~k~vlITGassGIG~~~a~~la~~G-~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~  132 (365)
                      +.++++++|+||||+|+||.+++++|+++| ++|++++|+.....     .... .  .+. +.+|++|.+.++++++..
T Consensus        41 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-----~~~~-~--~~~-~~~d~~~~~~~~~~~~~~  111 (357)
T 2x6t_A           41 GSGIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-----FVNL-V--DLN-IADYMDKEDFLIQIMAGE  111 (357)
T ss_dssp             -------CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG-----GGGT-T--TSC-CSEEEEHHHHHHHHHTTC
T ss_pred             cccCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch-----hhcc-c--Cce-EeeecCcHHHHHHHHhhc
Confidence            344678899999999999999999999999 89999999865421     1111 1  222 678999988877665420


Q ss_pred             HHHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc-
Q 017812          133 QQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA-  211 (365)
Q Consensus       133 ~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~-  211 (365)
                              ..+++|+|||+||....    +.+++++.+++|+.++..+++++.+.    + . +||++||.+.+..... 
T Consensus       112 --------~~~~~d~Vih~A~~~~~----~~~~~~~~~~~n~~~~~~ll~a~~~~----~-~-r~V~~SS~~v~g~~~~~  173 (357)
T 2x6t_A          112 --------EFGDVEAIFHEGACSST----TEWDGKYMMDNNYQYSKELLHYCLER----E-I-PFLYASSAATYGGRTSD  173 (357)
T ss_dssp             --------CCSSCCEEEECCSCCCT----TCCCHHHHHHHTHHHHHHHHHHHHHH----T-C-CEEEEEEGGGGCSCSSC
T ss_pred             --------ccCCCCEEEECCcccCC----ccCCHHHHHHHHHHHHHHHHHHHHHc----C-C-eEEEEcchHHhCCCCCC
Confidence                    24579999999997543    34457889999999999999999763    2 4 9999999876633211 


Q ss_pred             cCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc---hhHHHHHHH
Q 017812          212 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV---PSFLSLMAF  288 (365)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~---~~~~~~~~~  288 (365)
                      ..++          ..+..+...|+.||++.+.+++.++.+      .|++++.++||.+.++.....   .........
T Consensus       174 ~~~E----------~~~~~p~~~Y~~sK~~~E~~~~~~~~~------~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~  237 (357)
T 2x6t_A          174 FIES----------REYEKPLNVFGYSKFLFDEYVRQILPE------ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNT  237 (357)
T ss_dssp             CCSS----------GGGCCCSSHHHHHHHHHHHHHHHHGGG------CSSCEEEEEECEEESSSCTTCGGGSCHHHHHHH
T ss_pred             CcCC----------cCCCCCCChhHHHHHHHHHHHHHHHHH------cCCCEEEEecCeEECCCCCCCcccchHHHHHHH
Confidence            1111          123344678999999999999988754      479999999999988754311   011111100


Q ss_pred             HHH-----------HH-hcCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017812          289 TVL-----------KL-LGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  330 (365)
Q Consensus       289 ~~~-----------~~-~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~  330 (365)
                      ...           .. ...+..++|+|++++.++..+.   |..|...+|+++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~---~~~~~i~~~~~~  288 (357)
T 2x6t_A          238 QLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV---SGIFNLGTGRAE  288 (357)
T ss_dssp             HHHTTCCCEEETTGGGCEECEEEHHHHHHHHHHHHHHCC---CEEEEESCSCCE
T ss_pred             HHHcCCCcEEeCCCCcceEccEEHHHHHHHHHHHHhcCC---CCeEEecCCCcc
Confidence            000           01 2234688999999997665443   667766777665

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.85  E-value=4.7e-20  Score=171.68  Aligned_cols=181  Identities=14%  Similarity=0.085  Sum_probs=128.9

Q ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhccC
Q 017812           61 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  140 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~~  140 (365)
                      +|+||||+|+||++++++|+++|++|++++|......+..+.+.... +.++.++.+|++|.+++.++++.         
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~---------   71 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLG-GKHPTFVEGDIRNEALMTEILHD---------   71 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHH-TSCCEEEECCTTCHHHHHHHHHH---------
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhc-CCcceEEEccCCCHHHHHHHhhc---------
Confidence            59999999999999999999999999999875322112222232221 34678899999999988777653         


Q ss_pred             CCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCccccc
Q 017812          141 MHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITG  220 (365)
Q Consensus       141 ~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~~~~  220 (365)
                        .++|+||||||.....  ...+..++.+++|+.++..+++++...    + .++||++||.+.+..... .       
T Consensus        72 --~~~D~vih~A~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~iv~~SS~~~~g~~~~-~-------  134 (338)
T 1udb_A           72 --HAIDTVIHFAGLKAVG--ESVQKPLEYYDNNVNGTLRLISAMRAA----N-VKNFIFSSSATVYGDNPK-I-------  134 (338)
T ss_dssp             --TTCSEEEECCSCCCHH--HHHHCHHHHHHHHHHHHHHHHHHHHHH----T-CCEEEEEEEGGGGCSCCS-S-------
T ss_pred             --cCCCEEEECCccCccc--cchhcHHHHHHHHHHHHHHHHHHHHhc----C-CCeEEEEccHHHhCCCCC-C-------
Confidence              2599999999974321  123455778999999999998876432    2 479999999876532111 0       


Q ss_pred             cccccCCCC-ChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCC
Q 017812          221 KFFLRSKCY-PCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTN  274 (365)
Q Consensus       221 ~~~~~~~~~-~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~  274 (365)
                       ...+..+. ++...|+.||++.+.+++.++.+.     ++++++.++|+.+-.+
T Consensus       135 -~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-----~~~~~~ilR~~~v~G~  183 (338)
T 1udb_A          135 -PYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQ-----PDWSIALLRYFNPVGA  183 (338)
T ss_dssp             -SBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHHS-----TTCEEEEEEECEEECC
T ss_pred             -CcCcccCCCCCCChHHHHHHHHHHHHHHHHHhc-----CCCceEEEeeceecCC
Confidence             01111222 336789999999999999998873     4789999998776543

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.85  E-value=1e-19  Score=177.44  Aligned_cols=242  Identities=13%  Similarity=0.078  Sum_probs=157.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHC---CCEEEEEecCchhHHHHHHHHHhhcC--------------CCceEEEEec
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSRE---GFHVVLVGRSSHLLSETMADITSRNK--------------DARLEAFQVD  118 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~---G~~Vil~~r~~~~~~~~~~~l~~~~~--------------~~~~~~~~~D  118 (365)
                      ..++++|+||||+|+||.+++++|+++   |++|++++|+.+..+ ..+.+.+...              ..++.++.+|
T Consensus        70 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~D  148 (478)
T 4dqv_A           70 SPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDED-ARRRLEKTFDSGDPELLRHFKELAADRLEVVAGD  148 (478)
T ss_dssp             CSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHH-HHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHH-HHHHHHHHHHhcchhhhhhhhhhccCceEEEEeE
Confidence            467899999999999999999999999   999999999876542 2333332221              2589999999


Q ss_pred             CCChh------hHHHHHHHHHHHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCC
Q 017812          119 LSSFQ------SVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP  192 (365)
Q Consensus       119 ls~~~------~v~~~~~~~~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~  192 (365)
                      +++++      +++++++             ++|+||||||....      +.++..+++|+.|+..+++++...    +
T Consensus       149 l~~~~~gld~~~~~~~~~-------------~~D~Vih~Aa~~~~------~~~~~~~~~Nv~gt~~ll~aa~~~----~  205 (478)
T 4dqv_A          149 KSEPDLGLDQPMWRRLAE-------------TVDLIVDSAAMVNA------FPYHELFGPNVAGTAELIRIALTT----K  205 (478)
T ss_dssp             TTSGGGGCCHHHHHHHHH-------------HCCEEEECCSSCSB------SSCCEEHHHHHHHHHHHHHHHTSS----S
T ss_pred             CCCcccCCCHHHHHHHHc-------------CCCEEEECccccCC------cCHHHHHHHHHHHHHHHHHHHHhC----C
Confidence            99553      4444432             38999999998643      345678999999999999988542    2


Q ss_pred             CCCeEEEEcCCcccccccc-cCCCccc-cccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCc
Q 017812          193 VPSRIVNVTSFTHRNVFNA-QVNNETI-TGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGV  270 (365)
Q Consensus       193 ~~g~iV~vsS~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~  270 (365)
                       .+++|++||.+.+..... ....+.. ................|+.||++.+.+++.++.+.      |+++++++||.
T Consensus       206 -~~~~V~iSS~~v~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~------gi~~~ivRpg~  278 (478)
T 4dqv_A          206 -LKPFTYVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLC------ALPVAVFRCGM  278 (478)
T ss_dssp             -CCCEEEEEEGGGGTTSCTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHH------CCCEEEEEECE
T ss_pred             -CCeEEEEeehhhcCccCCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHh------CCCeEEEECce
Confidence             469999999765532211 1111100 00000000111223569999999999999998753      68999999999


Q ss_pred             ccCCcc-c---cchhHHHHHHHHHHHHhc--------------------CCCCHHHHHHHHHHHhcCC---CCCcccEEe
Q 017812          271 VKTNIM-R---EVPSFLSLMAFTVLKLLG--------------------LLQSPEKGINSVLDAALAP---PETSGVYFF  323 (365)
Q Consensus       271 v~T~~~-~---~~~~~~~~~~~~~~~~~~--------------------~~~~p~e~A~~i~~~~l~~---~~~~G~~~~  323 (365)
                      |..+-. .   ............. ...+                    -+...+++|++++.++...   +...|..|.
T Consensus       279 v~G~~~~~g~~~~~~~~~~l~~~~-~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~yn  357 (478)
T 4dqv_A          279 ILADTSYAGQLNMSDWVTRMVLSL-MATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYH  357 (478)
T ss_dssp             EECCSSSSSCCCTTBHHHHHHHHH-HHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEE
T ss_pred             eeCCCccCCcCCHHHHHHHHHHHH-HHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEE
Confidence            976532 1   1112221111111 1111                    1257889999999776542   344566776


Q ss_pred             CCCCcc
Q 017812          324 GGKGRT  329 (365)
Q Consensus       324 ~~~g~~  329 (365)
                      ..++++
T Consensus       358 v~~~~~  363 (478)
T 4dqv_A          358 VMNPHD  363 (478)
T ss_dssp             ESCCCC
T ss_pred             ecCCCC
Confidence            666665

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.84  E-value=5.5e-21  Score=177.98  Aligned_cols=233  Identities=17%  Similarity=0.182  Sum_probs=147.7

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHH--HHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSET--MADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~--~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      +|+||||||+|+||++++++|+++|++|+++.|+.++.++.  ...+. .  ..++.++++|++|.+++.++++      
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~-~--~~~~~~~~~Dl~d~~~~~~~~~------   79 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQ-E--LGDLKIFRADLTDELSFEAPIA------   79 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHG-G--GSCEEEEECCTTTSSSSHHHHT------
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcC-C--CCcEEEEecCCCChHHHHHHHc------
Confidence            68999999999999999999999999999999986543211  12222 1  2468889999999988776543      


Q ss_pred             hccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc-----
Q 017812          137 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA-----  211 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~-----  211 (365)
                             .+|+|||+||.... .  ..+..++.+++|+.|+..+++++.+..   + .+|||++||.++......     
T Consensus        80 -------~~D~Vih~A~~~~~-~--~~~~~~~~~~~nv~gt~~ll~aa~~~~---~-v~r~V~~SS~~~~~~~~~~~~~~  145 (338)
T 2rh8_A           80 -------GCDFVFHVATPVHF-A--SEDPENDMIKPAIQGVVNVMKACTRAK---S-VKRVILTSSAAAVTINQLDGTGL  145 (338)
T ss_dssp             -------TCSEEEEESSCCCC------------CHHHHHHHHHHHHHHHHCT---T-CCEEEEECCHHHHHHHHHTCSCC
T ss_pred             -------CCCEEEEeCCccCC-C--CCCcHHHHHHHHHHHHHHHHHHHHHcC---C-cCEEEEEecHHHeecCCcCCCCc
Confidence                   38999999996421 1  112234589999999999999987653   1 369999999874322110     


Q ss_pred             cCCCccccccccccCCCC-ChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcccc-chhHHHHH---
Q 017812          212 QVNNETITGKFFLRSKCY-PCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE-VPSFLSLM---  286 (365)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~-~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~-~~~~~~~~---  286 (365)
                      .++++........  .+. +....|+.||++.+.+++.++++      .|+++++++||.|.+|.... .+......   
T Consensus       146 ~~~E~~~~~~~~~--~~~~~~~~~Y~~sK~~~E~~~~~~~~~------~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~  217 (338)
T 2rh8_A          146 VVDEKNWTDIEFL--TSAKPPTWGYPASKTLAEKAAWKFAEE------NNIDLITVIPTLMAGSSLTSDVPSSIGLAMSL  217 (338)
T ss_dssp             CCCTTTTTCC---------CCCCCCTTSCCHHHHHHHHHHHH------HTCCEEEEEECEEESCCSSSSCCHHHHHHHHH
T ss_pred             ccChhhccchhhc--cccCCccchHHHHHHHHHHHHHHHHHH------cCCcEEEEeCCceECCCCCCCCCchHHHHHHH
Confidence            1111111000000  011 11226999999999888877654      47999999999999987543 22211100   


Q ss_pred             -----HHHH-HH----Hhc--CCCCHHHHHHHHHHHhcCCCCCcccEEe
Q 017812          287 -----AFTV-LK----LLG--LLQSPEKGINSVLDAALAPPETSGVYFF  323 (365)
Q Consensus       287 -----~~~~-~~----~~~--~~~~p~e~A~~i~~~~l~~~~~~G~~~~  323 (365)
                           .... ..    +.+  .+..++|+|++++.++. .+..+|.|+.
T Consensus       218 ~~g~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~-~~~~~~~~~~  265 (338)
T 2rh8_A          218 ITGNEFLINGMKGMQMLSGSVSIAHVEDVCRAHIFVAE-KESASGRYIC  265 (338)
T ss_dssp             HHTCHHHHHHHHHHHHHHSSEEEEEHHHHHHHHHHHHH-CTTCCEEEEE
T ss_pred             HcCCccccccccccccccCcccEEEHHHHHHHHHHHHc-CCCcCCcEEE
Confidence                 0000 00    111  36799999999997553 3444566644

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.84  E-value=8.2e-20  Score=168.15  Aligned_cols=220  Identities=15%  Similarity=0.055  Sum_probs=153.8

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhc
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  138 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~  138 (365)
                      +++|+||||+|+||++++++|+++|++|++++|+....+     +.      .+.++.+|++ .+++.++++        
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~~------~~~~~~~Dl~-~~~~~~~~~--------   61 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-----IN------DYEYRVSDYT-LEDLINQLN--------   61 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC----------------CCEEEECCCC-HHHHHHHTT--------
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-----CC------ceEEEEcccc-HHHHHHhhc--------
Confidence            368999999999999999999999999999999944322     11      5789999999 887766542        


Q ss_pred             cCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCccc
Q 017812          139 SDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETI  218 (365)
Q Consensus       139 ~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~~  218 (365)
                           ++|+|||+||.....      +.+..+++|+.++..+++++...    + .+++|++||.+.+......      
T Consensus        62 -----~~d~Vih~a~~~~~~------~~~~~~~~n~~~~~~ll~a~~~~----~-~~r~v~~SS~~vyg~~~~~------  119 (311)
T 3m2p_A           62 -----DVDAVVHLAATRGSQ------GKISEFHDNEILTQNLYDACYEN----N-ISNIVYASTISAYSDETSL------  119 (311)
T ss_dssp             -----TCSEEEECCCCCCSS------SCGGGTHHHHHHHHHHHHHHHHT----T-CCEEEEEEEGGGCCCGGGC------
T ss_pred             -----CCCEEEEccccCCCC------ChHHHHHHHHHHHHHHHHHHHHc----C-CCEEEEEccHHHhCCCCCC------
Confidence                 599999999986443      45678899999999999988543    2 4689999997765332111      


Q ss_pred             cccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHH-HHHh---
Q 017812          219 TGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTV-LKLL---  294 (365)
Q Consensus       219 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~-~~~~---  294 (365)
                         .+.+..+..+...|+.||++.+.+++.++.+      .|++++.++||.+.++................ ..+.   
T Consensus       120 ---~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~------~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  190 (311)
T 3m2p_A          120 ---PWNEKELPLPDLMYGVSKLACEHIGNIYSRK------KGLCIKNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLH  190 (311)
T ss_dssp             ---SBCTTSCCCCSSHHHHHHHHHHHHHHHHHHH------SCCEEEEEEECEEECSCC--CCHHHHHHHHHHTCCCEEES
T ss_pred             ---CCCCCCCCCCCchhHHHHHHHHHHHHHHHHH------cCCCEEEEeeCceeCcCCCCCCHHHHHHHHHHcCCCeEEe
Confidence               1112244556788999999999999998874      58999999999998876542111111111000 0010   


Q ss_pred             ------cCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcccc
Q 017812          295 ------GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  331 (365)
Q Consensus       295 ------~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~~  331 (365)
                            ..+..++|+|++++.++..+.  .|..|...+|+++.
T Consensus       191 g~~~~~~~~v~v~Dva~a~~~~~~~~~--~~~~~~i~~~~~~s  231 (311)
T 3m2p_A          191 ANSVAKREFLYAKDAAKSVIYALKQEK--VSGTFNIGSGDALT  231 (311)
T ss_dssp             SBCCCCEEEEEHHHHHHHHHHHTTCTT--CCEEEEECCSCEEC
T ss_pred             cCCCeEEceEEHHHHHHHHHHHHhcCC--CCCeEEeCCCCccc
Confidence                  023568899999996554433  56677767777663

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.84  E-value=1.2e-19  Score=171.20  Aligned_cols=240  Identities=9%  Similarity=0.088  Sum_probs=161.1

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHC-CCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCC-ChhhHHHHHHH
Q 017812           54 ITGIKRPVCIVTGATSGLGAAAAYALSRE-GFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS-SFQSVLKFKDS  131 (365)
Q Consensus        54 ~~~~~~k~vlITGassGIG~~~a~~la~~-G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls-~~~~v~~~~~~  131 (365)
                      +..+.+++|+||||+|+||.+++++|+++ |++|++++|+.++.....+       ..++.++.+|++ |.+++.++++ 
T Consensus        19 ~~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-------~~~v~~~~~Dl~~d~~~~~~~~~-   90 (372)
T 3slg_A           19 PGSMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVK-------HERMHFFEGDITINKEWVEYHVK-   90 (372)
T ss_dssp             ----CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGG-------STTEEEEECCTTTCHHHHHHHHH-
T ss_pred             CcccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhcc-------CCCeEEEeCccCCCHHHHHHHhc-
Confidence            34577899999999999999999999998 9999999999765433211       247899999999 8888877664 


Q ss_pred             HHHHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017812          132 LQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  211 (365)
Q Consensus       132 ~~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~  211 (365)
                                  ++|+|||+||...+.  ...++.++.+++|+.++..+++++...    +  .++|++||.+.+.....
T Consensus        91 ------------~~d~Vih~A~~~~~~--~~~~~~~~~~~~nv~~~~~ll~a~~~~----~--~~~v~~SS~~vyg~~~~  150 (372)
T 3slg_A           91 ------------KCDVILPLVAIATPA--TYVKQPLRVFELDFEANLPIVRSAVKY----G--KHLVFPSTSEVYGMCAD  150 (372)
T ss_dssp             ------------HCSEEEECBCCCCHH--HHHHCHHHHHHHHTTTTHHHHHHHHHH----T--CEEEEECCGGGGBSCCC
T ss_pred             ------------cCCEEEEcCccccHH--HHhhCHHHHHHHHHHHHHHHHHHHHHh----C--CcEEEeCcHHHhCCCCC
Confidence                        289999999975431  123456688999999999999888554    2  59999999766533211


Q ss_pred             -cCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcccc-------chhHH
Q 017812          212 -QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE-------VPSFL  283 (365)
Q Consensus       212 -~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~-------~~~~~  283 (365)
                       ....+...   ........+...|+.||++.+.+++.++.      . |++++.++|+.+..+....       .....
T Consensus       151 ~~~~e~~~~---~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~------~-g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~  220 (372)
T 3slg_A          151 EQFDPDASA---LTYGPINKPRWIYACSKQLMDRVIWGYGM------E-GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVV  220 (372)
T ss_dssp             SSBCTTTCC---EEECCTTCTTHHHHHHHHHHHHHHHHHHT------T-TCEEEEEEECSEECSSCCCTTCSBSCSCHHH
T ss_pred             CCCCccccc---cccCCCCCCCCcHHHHHHHHHHHHHHHHH------C-CCCEEEEccccccCCCcccccccccccchHH
Confidence             11111000   00001114567899999999999988763      3 8999999999998776432       01111


Q ss_pred             HHHHHHHHH--Hh---c------CCCCHHHHHHHHHHHhcCCC-CCcccEEeCCC-Ccccc
Q 017812          284 SLMAFTVLK--LL---G------LLQSPEKGINSVLDAALAPP-ETSGVYFFGGK-GRTVN  331 (365)
Q Consensus       284 ~~~~~~~~~--~~---~------~~~~p~e~A~~i~~~~l~~~-~~~G~~~~~~~-g~~~~  331 (365)
                      .........  +.   +      .+..++|+|++++.++..+. ...|..|...+ |+++.
T Consensus       221 ~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~~s  281 (372)
T 3slg_A          221 TQFLGHIVRGENISLVDGGSQKRAFTYVDDGISALMKIIENSNGVATGKIYNIGNPNNNFS  281 (372)
T ss_dssp             HHHHHHHHHTCCEEEGGGGCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTCEEE
T ss_pred             HHHHHHHHcCCCcEEeCCCceEEEEEEHHHHHHHHHHHHhcccCcCCCceEEeCCCCCCcc
Confidence            111111110  00   0      24578999999997665543 24677777676 46663

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.84  E-value=3.3e-21  Score=168.88  Aligned_cols=212  Identities=15%  Similarity=0.034  Sum_probs=137.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhccC
Q 017812           61 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  140 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~~  140 (365)
                      +|+||||||+||++++++|+++|++|++++|+.+++++..        ...+.++.+|++|.++     +.         
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--------~~~~~~~~~D~~d~~~-----~~---------   59 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL--------GATVATLVKEPLVLTE-----AD---------   59 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHT--------CTTSEEEECCGGGCCH-----HH---------
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccccccc--------CCCceEEecccccccH-----hh---------
Confidence            4999999999999999999999999999999987654331        3468899999999887     11         


Q ss_pred             CCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCccccc
Q 017812          141 MHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITG  220 (365)
Q Consensus       141 ~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~~~~  220 (365)
                       ..++|+||||||.....         ....+|+.++..+    ++.+++.+  +++|++||.++......... ...  
T Consensus        60 -~~~~d~vi~~ag~~~~~---------~~~~~n~~~~~~l----~~a~~~~~--~~~v~~SS~~~~~~~~~~~~-~~~--  120 (224)
T 3h2s_A           60 -LDSVDAVVDALSVPWGS---------GRGYLHLDFATHL----VSLLRNSD--TLAVFILGSASLAMPGADHP-MIL--  120 (224)
T ss_dssp             -HTTCSEEEECCCCCTTS---------SCTHHHHHHHHHH----HHTCTTCC--CEEEEECCGGGSBCTTCSSC-GGG--
T ss_pred             -cccCCEEEECCccCCCc---------chhhHHHHHHHHH----HHHHHHcC--CcEEEEecceeeccCCCCcc-ccc--
Confidence             14599999999986211         1245677776544    45555554  89999999876533211100 000  


Q ss_pred             cccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc-hhHHHHHHHHHHHHhcCCCC
Q 017812          221 KFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV-PSFLSLMAFTVLKLLGLLQS  299 (365)
Q Consensus       221 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~~~~~~~  299 (365)
                         .......+...|+.+|++.+.+ +.+   ..   ..|++++.++||++.++..... .......  ........+.+
T Consensus       121 ---~~~~~~~~~~~y~~sK~~~e~~-~~~---~~---~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~--~~~~~~~~~i~  188 (224)
T 3h2s_A          121 ---DFPESAASQPWYDGALYQYYEY-QFL---QM---NANVNWIGISPSEAFPSGPATSYVAGKDTL--LVGEDGQSHIT  188 (224)
T ss_dssp             ---GCCGGGGGSTTHHHHHHHHHHH-HHH---TT---CTTSCEEEEEECSBCCCCCCCCEEEESSBC--CCCTTSCCBCC
T ss_pred             ---cCCCCCccchhhHHHHHHHHHH-HHH---Hh---cCCCcEEEEcCccccCCCcccCceeccccc--ccCCCCCceEe
Confidence               0011222367899999998844 222   22   5799999999999987732111 0000000  00001124579


Q ss_pred             HHHHHHHHHHHhcCCCCCcccEEeCCC
Q 017812          300 PEKGINSVLDAALAPPETSGVYFFGGK  326 (365)
Q Consensus       300 p~e~A~~i~~~~l~~~~~~G~~~~~~~  326 (365)
                      ++|+|++++.++..+ ...|+.|...+
T Consensus       189 ~~DvA~~~~~~l~~~-~~~g~~~~~~~  214 (224)
T 3h2s_A          189 TGNMALAILDQLEHP-TAIRDRIVVRD  214 (224)
T ss_dssp             HHHHHHHHHHHHHSC-CCTTSEEEEEE
T ss_pred             HHHHHHHHHHHhcCc-cccCCEEEEec
Confidence            999999999866554 44566665443

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.84  E-value=2.8e-19  Score=166.63  Aligned_cols=234  Identities=10%  Similarity=0.079  Sum_probs=156.1

Q ss_pred             CEEEEecCCChHHHHHHHHHHHC-CCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCCh-hhHHHHHHHHHHHHh
Q 017812           60 PVCIVTGATSGLGAAAAYALSRE-GFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF-QSVLKFKDSLQQWLL  137 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~-G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~-~~v~~~~~~~~~~~~  137 (365)
                      ++|+||||+|+||++++++|+++ |++|++++|+.++.+...       ...++.++.+|++|. +.++++++       
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~-------   66 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-------NHPHFHFVEGDISIHSEWIEYHVK-------   66 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT-------TCTTEEEEECCTTTCSHHHHHHHH-------
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhh-------cCCCeEEEeccccCcHHHHHhhcc-------
Confidence            36999999999999999999998 899999999876543211       134688999999985 44555443       


Q ss_pred             ccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc-cCCCc
Q 017812          138 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA-QVNNE  216 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~-~~~~~  216 (365)
                            ++|+|||+||...+.  ...++.+..+++|+.++..+++++.+.    +  +++|++||.+.+..... ..+.+
T Consensus        67 ------~~d~vih~A~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~----~--~~~v~~SS~~v~g~~~~~~~~e~  132 (345)
T 2bll_A           67 ------KCDVVLPLVAIATPI--EYTRNPLRVFELDFEENLRIIRYCVKY----R--KRIIFPSTSEVYGMCSDKYFDED  132 (345)
T ss_dssp             ------HCSEEEECBCCCCHH--HHHHSHHHHHHHHTHHHHHHHHHHHHT----T--CEEEEECCGGGGBTCCCSSBCTT
T ss_pred             ------CCCEEEEcccccCcc--chhcCHHHHHHHHHHHHHHHHHHHHHh----C--CeEEEEecHHHcCCCCCCCcCCc
Confidence                  289999999975321  113456789999999999999888542    2  69999999876533221 11111


Q ss_pred             cccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc-------hhHHHHHHHH
Q 017812          217 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV-------PSFLSLMAFT  289 (365)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~-------~~~~~~~~~~  289 (365)
                      ....  . ......+...|+.||++.+.+++.++.+.      |+++++++||.+.++.....       ..........
T Consensus       133 ~~~~--~-~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~------~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~  203 (345)
T 2bll_A          133 HSNL--I-VGPVNKPRWIYSVSKQLLDRVIWAYGEKE------GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILN  203 (345)
T ss_dssp             TCCC--B-CCCTTCGGGHHHHHHHHHHHHHHHHHHHH------CCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHH
T ss_pred             cccc--c-cCcccCcccccHHHHHHHHHHHHHHHHhc------CCCEEEEcCCcccCCCcccccccccccccHHHHHHHH
Confidence            0000  0 00011345689999999999999998763      68999999999987764321       1111111110


Q ss_pred             HHH--Hh---c------CCCCHHHHHHHHHHHhcCCC-CCcccEEeCCCCc-cc
Q 017812          290 VLK--LL---G------LLQSPEKGINSVLDAALAPP-ETSGVYFFGGKGR-TV  330 (365)
Q Consensus       290 ~~~--~~---~------~~~~p~e~A~~i~~~~l~~~-~~~G~~~~~~~g~-~~  330 (365)
                      ...  +.   +      .+..++|+|++++.++.... ...|..|...+++ ++
T Consensus       204 ~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~g~~~~i~~~~~~~  257 (345)
T 2bll_A          204 LVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEA  257 (345)
T ss_dssp             HHHTCCEEEGGGSCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTSEE
T ss_pred             HHcCCCcEEECCCCEEEEEEEHHHHHHHHHHHHhhccccCCCceEEeCCCCCCC
Confidence            000  10   1      24689999999997665432 2467777777764 55

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.82  E-value=1.5e-19  Score=164.81  Aligned_cols=205  Identities=17%  Similarity=0.086  Sum_probs=145.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhc
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  138 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~  138 (365)
                      .++|+||||+|+||++++++|+++|++|++++|+                       .+|++|.+++.++++..      
T Consensus        12 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~-----------------------~~Dl~d~~~~~~~~~~~------   62 (292)
T 1vl0_A           12 HMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ-----------------------DLDITNVLAVNKFFNEK------   62 (292)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT-----------------------TCCTTCHHHHHHHHHHH------
T ss_pred             cceEEEECCCChHHHHHHHHHHhCCCeEEeccCc-----------------------cCCCCCHHHHHHHHHhc------
Confidence            5789999999999999999999999999999996                       27999999888776542      


Q ss_pred             cCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCccc
Q 017812          139 SDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETI  218 (365)
Q Consensus       139 ~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~~  218 (365)
                           ++|+|||+||....  ..+.+++++.+++|+.++..+++++.+.    +  .+||++||.+.+......      
T Consensus        63 -----~~d~vih~A~~~~~--~~~~~~~~~~~~~nv~~~~~l~~a~~~~----~--~~iv~~SS~~v~~~~~~~------  123 (292)
T 1vl0_A           63 -----KPNVVINCAAHTAV--DKCEEQYDLAYKINAIGPKNLAAAAYSV----G--AEIVQISTDYVFDGEAKE------  123 (292)
T ss_dssp             -----CCSEEEECCCCCCH--HHHHHCHHHHHHHHTHHHHHHHHHHHHH----T--CEEEEEEEGGGSCSCCSS------
T ss_pred             -----CCCEEEECCccCCH--HHHhcCHHHHHHHHHHHHHHHHHHHHHc----C--CeEEEechHHeECCCCCC------
Confidence                 49999999997432  1234677899999999999999998763    2  499999998766332110      


Q ss_pred             cccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHH-HH----
Q 017812          219 TGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVL-KL----  293 (365)
Q Consensus       219 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~-~~----  293 (365)
                         .+.+..+..+...|+.||++.+.+++.++       .   .++.++|+.+.++ .......  ....... .+    
T Consensus       124 ---~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~-------~---~~~~lR~~~v~G~-~~~~~~~--~~~~~~~~~~~~~~  187 (292)
T 1vl0_A          124 ---PITEFDEVNPQSAYGKTKLEGENFVKALN-------P---KYYIVRTAWLYGD-GNNFVKT--MINLGKTHDELKVV  187 (292)
T ss_dssp             ---CBCTTSCCCCCSHHHHHHHHHHHHHHHHC-------S---SEEEEEECSEESS-SSCHHHH--HHHHHHHCSEEEEE
T ss_pred             ---CCCCCCCCCCccHHHHHHHHHHHHHHhhC-------C---CeEEEeeeeeeCC-CcChHHH--HHHHHhcCCcEEee
Confidence               11111334456789999999999887753       1   3677889988866 2221111  1110000 01    


Q ss_pred             ---hcCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017812          294 ---LGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  330 (365)
Q Consensus       294 ---~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~  330 (365)
                         ...+..++|+|++++.++..+   .|..|...+|++.
T Consensus       188 ~~~~~~~i~v~Dva~~~~~~~~~~---~~~~~~i~~~~~~  224 (292)
T 1vl0_A          188 HDQVGTPTSTVDLARVVLKVIDEK---NYGTFHCTCKGIC  224 (292)
T ss_dssp             SSCEECCEEHHHHHHHHHHHHHHT---CCEEEECCCBSCE
T ss_pred             cCeeeCCccHHHHHHHHHHHHhcC---CCcEEEecCCCCc
Confidence               123457999999999766543   5677777777765

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.82  E-value=1.9e-19  Score=165.46  Aligned_cols=228  Identities=12%  Similarity=0.029  Sum_probs=155.6

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHC--CCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           59 RPVCIVTGATSGLGAAAAYALSRE--GFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~--G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      +++++||||+|+||.+++++|+++  |++|++++|+....+     +.     .++.++.+|++|.+++.+++++     
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----~~-----~~~~~~~~D~~d~~~~~~~~~~-----   66 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-----VV-----NSGPFEVVNALDFNQIEHLVEV-----   66 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-----HH-----HSSCEEECCTTCHHHHHHHHHH-----
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-----cc-----CCCceEEecCCCHHHHHHHHhh-----
Confidence            467999999999999999999999  899999999876521     11     1356889999999988877653     


Q ss_pred             hccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017812          137 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  216 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~  216 (365)
                            .++|++||+||.....   ..++.+..+++|+.++..+++++.+.    + .+++|++||.+.+.......   
T Consensus        67 ------~~~d~vih~a~~~~~~---~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~~v~~SS~~~~~~~~~~~---  129 (312)
T 2yy7_A           67 ------HKITDIYLMAALLSAT---AEKNPAFAWDLNMNSLFHVLNLAKAK----K-IKKIFWPSSIAVFGPTTPKE---  129 (312)
T ss_dssp             ------TTCCEEEECCCCCHHH---HHHCHHHHHHHHHHHHHHHHHHHHTT----S-CSEEECCEEGGGCCTTSCSS---
T ss_pred             ------cCCCEEEECCccCCCc---hhhChHHHHHHHHHHHHHHHHHHHHc----C-CCEEEEeccHHHhCCCCCCC---
Confidence                  2599999999975321   23567889999999999999988652    2 46999999988764321110   


Q ss_pred             cccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc----hhHHHHHHHHHH-
Q 017812          217 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV----PSFLSLMAFTVL-  291 (365)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~----~~~~~~~~~~~~-  291 (365)
                           ...+..+..+...|+.||++.+.+++.++.++      |++++.++||.+..+.....    ............ 
T Consensus       130 -----~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~------~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  198 (312)
T 2yy7_A          130 -----NTPQYTIMEPSTVYGISKQAGERWCEYYHNIY------GVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIAD  198 (312)
T ss_dssp             -----SBCSSCBCCCCSHHHHHHHHHHHHHHHHHHHH------CCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHT
T ss_pred             -----CccccCcCCCCchhHHHHHHHHHHHHHHHHhc------CCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcC
Confidence                 01111334556789999999999999988753      78999999999987542110    111111111000 


Q ss_pred             HHh---------cCCCCHHHHHHHHHHHhcCCCCC--cccEEeCCCCccc
Q 017812          292 KLL---------GLLQSPEKGINSVLDAALAPPET--SGVYFFGGKGRTV  330 (365)
Q Consensus       292 ~~~---------~~~~~p~e~A~~i~~~~l~~~~~--~G~~~~~~~g~~~  330 (365)
                      .+.         ..+..++|+|++++.++..+...  .|..|...+ ++.
T Consensus       199 ~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~ni~~-~~~  247 (312)
T 2yy7_A          199 KKYECFLSSETKMPMMYMDDAIDATINIMKAPVEKIKIHSSYNLAA-MSF  247 (312)
T ss_dssp             SEEEESSCTTCCEEEEEHHHHHHHHHHHHHSCGGGCCCSSCEECCS-EEE
T ss_pred             CCeEEecCCCceeeeeeHHHHHHHHHHHHhCcccccccCceEEeCC-Ccc
Confidence            000         01246799999999766554321  235555553 444

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.81  E-value=5.7e-19  Score=164.78  Aligned_cols=233  Identities=13%  Similarity=0.051  Sum_probs=151.0

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      ..+++++|+||||+|+||++++++|+++|++|++++|+.....+..+.+   ....++.++.+|+++..           
T Consensus        23 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~-----------   88 (343)
T 2b69_A           23 MEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHW---IGHENFELINHDVVEPL-----------   88 (343)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGG---TTCTTEEEEECCTTSCC-----------
T ss_pred             cccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhh---ccCCceEEEeCccCChh-----------
Confidence            3467899999999999999999999999999999999754221111111   11346889999998752           


Q ss_pred             HHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc-cC
Q 017812          135 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA-QV  213 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~-~~  213 (365)
                             ..++|+|||+||......  ..++.+..+++|+.++..+++++.+.    +  .++|++||.+.+..... ..
T Consensus        89 -------~~~~d~vih~A~~~~~~~--~~~~~~~~~~~n~~~~~~l~~a~~~~----~--~~~v~~SS~~v~g~~~~~~~  153 (343)
T 2b69_A           89 -------YIEVDQIYHLASPASPPN--YMYNPIKTLKTNTIGTLNMLGLAKRV----G--ARLLLASTSEVYGDPEVHPQ  153 (343)
T ss_dssp             -------CCCCSEEEECCSCCSHHH--HTTCHHHHHHHHHHHHHHHHHHHHHH----T--CEEEEEEEGGGGBSCSSSSB
T ss_pred             -------hcCCCEEEECccccCchh--hhhCHHHHHHHHHHHHHHHHHHHHHh----C--CcEEEECcHHHhCCCCCCCC
Confidence                   245999999999753211  12345678999999999999988653    2  49999999876533211 11


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccch-hHHHHHHHHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP-SFLSLMAFTVLK  292 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~-~~~~~~~~~~~~  292 (365)
                      ++.     .+....+..+...|+.||++.+.+++.++.+.      |++++.++||.+.++...... ............
T Consensus       154 ~E~-----~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~------~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~  222 (343)
T 2b69_A          154 SED-----YWGHVNPIGPRACYDEGKRVAETMCYAYMKQE------GVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQ  222 (343)
T ss_dssp             CTT-----CCCBCCSSSTTHHHHHHHHHHHHHHHHHHHHH------CCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHH
T ss_pred             ccc-----ccccCCCCCCCCchHHHHHHHHHHHHHHHHHh------CCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHc
Confidence            111     01111344567889999999999999988753      789999999999887643210 111111110010


Q ss_pred             --Hh---------cCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017812          293 --LL---------GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  330 (365)
Q Consensus       293 --~~---------~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~  330 (365)
                        +.         ..+..++|+|++++.++.. + ..| .|...+++++
T Consensus       223 ~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~-~-~~~-~~~i~~~~~~  268 (343)
T 2b69_A          223 GEPLTVYGSGSQTRAFQYVSDLVNGLVALMNS-N-VSS-PVNLGNPEEH  268 (343)
T ss_dssp             TCCEEEESSSCCEEECEEHHHHHHHHHHHHTS-S-CCS-CEEESCCCEE
T ss_pred             CCCceEcCCCCeEEeeEeHHHHHHHHHHHHhc-C-CCC-eEEecCCCCC
Confidence              10         1245899999999965533 2 234 4555556655

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.81  E-value=2.4e-19  Score=164.55  Aligned_cols=225  Identities=14%  Similarity=0.075  Sum_probs=152.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHCC-CEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhcc
Q 017812           61 VCIVTGATSGLGAAAAYALSREG-FHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  139 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G-~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~  139 (365)
                      +|+||||+|+||++++++|+++| ++|++++|+.....  ...+.    +  +. +.+|++|.+.++++++..       
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~----~--~~-~~~d~~~~~~~~~~~~~~-------   64 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLV----D--LN-IADYMDKEDFLIQIMAGE-------   64 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG--GHHHH----T--SC-CSEEEEHHHHHHHHHTTC-------
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch--hhhcC----c--ce-eccccccHHHHHHHHhcc-------
Confidence            38999999999999999999999 89999999865421  11121    1  12 678999888776654310       


Q ss_pred             CCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc-cCCCccc
Q 017812          140 DMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA-QVNNETI  218 (365)
Q Consensus       140 ~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~-~~~~~~~  218 (365)
                       ..+++|++||+||....    +.++.+..+++|+.++..+++++.+.    + . ++|++||.+.+..... ..++   
T Consensus        65 -~~~~~d~vi~~a~~~~~----~~~~~~~~~~~n~~~~~~l~~a~~~~----~-~-~~v~~SS~~v~g~~~~~~~~E---  130 (310)
T 1eq2_A           65 -EFGDVEAIFHEGACSST----TEWDGKYMMDNNYQYSKELLHYCLER----E-I-PFLYASSAATYGGRTSDFIES---  130 (310)
T ss_dssp             -CCSSCCEEEECCSCCCT----TCCCHHHHHHHTHHHHHHHHHHHHHH----T-C-CEEEEEEGGGGTTCCSCBCSS---
T ss_pred             -ccCCCcEEEECcccccC----cccCHHHHHHHHHHHHHHHHHHHHHc----C-C-eEEEEeeHHHhCCCCCCCCCC---
Confidence             12369999999997543    33456889999999999999998654    2 4 9999999876533211 1111   


Q ss_pred             cccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcccc------c-hhHHHHHH---H
Q 017812          219 TGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE------V-PSFLSLMA---F  288 (365)
Q Consensus       219 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~------~-~~~~~~~~---~  288 (365)
                             ..+..+...|+.||++.+.+++.++.+      .|++++.++||.+.++....      . +.......   .
T Consensus       131 -------~~~~~p~~~Y~~sK~~~e~~~~~~~~~------~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  197 (310)
T 1eq2_A          131 -------REYEKPLNVYGYSKFLFDEYVRQILPE------ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGES  197 (310)
T ss_dssp             -------GGGCCCSSHHHHHHHHHHHHHHHHGGG------CSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC---
T ss_pred             -------CCCCCCCChhHHHHHHHHHHHHHHHHH------cCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCC
Confidence                   123344678999999999999888753      48999999999998876431      1 11111000   0


Q ss_pred             HHH----HH-hcCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcccc
Q 017812          289 TVL----KL-LGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  331 (365)
Q Consensus       289 ~~~----~~-~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~~  331 (365)
                      ...    .. ...+..++|+|++++.++..+.   |..|...+|+++.
T Consensus       198 ~~~~~~g~~~~~~~i~v~Dva~~~~~~~~~~~---~~~~~i~~~~~~s  242 (310)
T 1eq2_A          198 PKLFEGSENFKRDFVYVGDVADVNLWFLENGV---SGIFNLGTGRAES  242 (310)
T ss_dssp             ----------CBCEEEHHHHHHHHHHHHHHCC---CEEEEESCSCCBC
T ss_pred             cEEecCCCcceEccEEHHHHHHHHHHHHhcCC---CCeEEEeCCCccC
Confidence            000    01 2234678999999997665444   5666666666653

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.81  E-value=7.6e-21  Score=165.37  Aligned_cols=200  Identities=13%  Similarity=0.013  Sum_probs=142.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~--~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      .+++++||||+|+||++++++|+++|+  +|++++|++++          .  ..++.++.+|++|.+++.+        
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~----------~--~~~~~~~~~D~~~~~~~~~--------   63 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----------E--HPRLDNPVGPLAELLPQLD--------   63 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----------C--CTTEECCBSCHHHHGGGCC--------
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc----------c--CCCceEEeccccCHHHHHH--------
Confidence            367899999999999999999999998  99999998764          1  3467888999998776533        


Q ss_pred             HhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCC
Q 017812          136 LLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNN  215 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~  215 (365)
                           ..  +|++|||||....    +.+.+++.+++|+.++..+++++.+.    + .+++|++||...+         
T Consensus        64 -----~~--~d~vi~~a~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~~v~~Ss~~~~---------  118 (215)
T 2a35_A           64 -----GS--IDTAFCCLGTTIK----EAGSEEAFRAVDFDLPLAVGKRALEM----G-ARHYLVVSALGAD---------  118 (215)
T ss_dssp             -----SC--CSEEEECCCCCHH----HHSSHHHHHHHHTHHHHHHHHHHHHT----T-CCEEEEECCTTCC---------
T ss_pred             -----hh--hcEEEECeeeccc----cCCCHHHHHHhhHHHHHHHHHHHHHc----C-CCEEEEECCcccC---------
Confidence                 22  8999999997532    23567889999999999999988653    2 4699999998866         


Q ss_pred             ccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeE-EEEecCCcccCCcccc-chhHHH-H-HHHHHH
Q 017812          216 ETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVS-VIAADPGVVKTNIMRE-VPSFLS-L-MAFTVL  291 (365)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~-v~~v~PG~v~T~~~~~-~~~~~~-~-~~~~~~  291 (365)
                                 .  ++...|+.+|++.+.+.+          ..|++ ++.++||++.++.... +..... . ..... 
T Consensus       119 -----------~--~~~~~y~~sK~~~e~~~~----------~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~-  174 (215)
T 2a35_A          119 -----------A--KSSIFYNRVKGELEQALQ----------EQGWPQLTIARPSLLFGPREEFRLAEILAAPIARILP-  174 (215)
T ss_dssp             -----------T--TCSSHHHHHHHHHHHHHT----------TSCCSEEEEEECCSEESTTSCEEGGGGTTCCCC-----
T ss_pred             -----------C--CCccHHHHHHHHHHHHHH----------HcCCCeEEEEeCceeeCCCCcchHHHHHHHhhhhccC-
Confidence                       1  234579999999987764          24788 9999999998875321 100000 0 00000 


Q ss_pred             HHhcCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017812          292 KLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  330 (365)
Q Consensus       292 ~~~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~  330 (365)
                      . ...+.+++|+|++++.++..+.   |..|...++++.
T Consensus       175 ~-~~~~i~~~Dva~~~~~~~~~~~---~~~~~i~~~~~~  209 (215)
T 2a35_A          175 G-KYHGIEACDLARALWRLALEEG---KGVRFVESDELR  209 (215)
T ss_dssp             C-HHHHHHHHHHHHHHHHHHTCCC---SEEEEEEHHHHH
T ss_pred             C-CcCcEeHHHHHHHHHHHHhcCC---CCceEEcHHHHH
Confidence            0 0123488999999997665543   444544444444

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.81  E-value=2.8e-19  Score=161.18  Aligned_cols=205  Identities=17%  Similarity=0.100  Sum_probs=139.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhccC
Q 017812           61 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  140 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~~  140 (365)
                      +++||||+|+||++++++|+ +|++|++++|+.+..           .+     +.+|++|.+++.++++.+        
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~~-----------~~-----~~~Dl~~~~~~~~~~~~~--------   56 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEIQ-----------GG-----YKLDLTDFPRLEDFIIKK--------   56 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCCT-----------TC-----EECCTTSHHHHHHHHHHH--------
T ss_pred             EEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcCC-----------CC-----ceeccCCHHHHHHHHHhc--------
Confidence            59999999999999999999 589999999987420           12     889999999988877643        


Q ss_pred             CCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCccccc
Q 017812          141 MHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITG  220 (365)
Q Consensus       141 ~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~~~~  220 (365)
                         ++|+||||||....  ..+.+++++.+++|+.++..+++++.+    .  +++||++||.+++.......+      
T Consensus        57 ---~~d~vi~~a~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~----~--~~~iv~~SS~~~~~~~~~~~~------  119 (273)
T 2ggs_A           57 ---RPDVIINAAAMTDV--DKCEIEKEKAYKINAEAVRHIVRAGKV----I--DSYIVHISTDYVFDGEKGNYK------  119 (273)
T ss_dssp             ---CCSEEEECCCCCCH--HHHHHCHHHHHHHHTHHHHHHHHHHHH----T--TCEEEEEEEGGGSCSSSCSBC------
T ss_pred             ---CCCEEEECCcccCh--hhhhhCHHHHHHHhHHHHHHHHHHHHH----h--CCeEEEEecceeEcCCCCCcC------
Confidence               49999999997532  123467889999999999999999865    2  359999999987643221111      


Q ss_pred             cccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH------h
Q 017812          221 KFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL------L  294 (365)
Q Consensus       221 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~------~  294 (365)
                          +..+..+...|+.||++.+.+++.    +.   ...+|++.+. |  .+++...+   ..  ......+      .
T Consensus       120 ----e~~~~~~~~~Y~~sK~~~e~~~~~----~~---~~~iR~~~v~-G--~~~~~~~~---~~--~~~~~~~~~~~~~~  180 (273)
T 2ggs_A          120 ----EEDIPNPINYYGLSKLLGETFALQ----DD---SLIIRTSGIF-R--NKGFPIYV---YK--TLKEGKTVFAFKGY  180 (273)
T ss_dssp             ----TTSCCCCSSHHHHHHHHHHHHHCC----TT---CEEEEECCCB-S--SSSHHHHH---HH--HHHTTCCEEEESCE
T ss_pred             ----CCCCCCCCCHHHHHHHHHHHHHhC----CC---eEEEeccccc-c--ccHHHHHH---HH--HHHcCCCEEeecCC
Confidence                113334567899999999998876    22   3345555444 3  22221100   00  0000001      2


Q ss_pred             cCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017812          295 GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  330 (365)
Q Consensus       295 ~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~  330 (365)
                      ..+..++|+|++++.++..+  .+| .|...+ +++
T Consensus       181 ~~~~~~~dva~~i~~~~~~~--~~g-~~~i~~-~~~  212 (273)
T 2ggs_A          181 YSPISARKLASAILELLELR--KTG-IIHVAG-ERI  212 (273)
T ss_dssp             ECCCBHHHHHHHHHHHHHHT--CCE-EEECCC-CCE
T ss_pred             CCceEHHHHHHHHHHHHhcC--cCC-eEEECC-Ccc
Confidence            35678999999999766543  355 555555 555

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.81  E-value=5.5e-19  Score=180.25  Aligned_cols=191  Identities=16%  Similarity=0.104  Sum_probs=135.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      ++++++|+||||+|+||++++++|+++|++|++++|+.....+..+++.... ..++.++.+|++|.+++.+++++    
T Consensus         8 ~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~v~~v~~Dl~d~~~l~~~~~~----   82 (699)
T 1z45_A            8 ESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLT-KHHIPFYEVDLCDRKGLEKVFKE----   82 (699)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHH-TSCCCEEECCTTCHHHHHHHHHH----
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhcc-CCceEEEEcCCCCHHHHHHHHHh----
Confidence            4678999999999999999999999999999999997654333333332221 34678899999999988877653    


Q ss_pred             HhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCC
Q 017812          136 LLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNN  215 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~  215 (365)
                             .++|+|||+||.....  ...+..++.+++|+.++..+++++...    + .++||++||.+.+.........
T Consensus        83 -------~~~D~Vih~A~~~~~~--~~~~~~~~~~~~Nv~gt~~ll~a~~~~----~-~~~iV~~SS~~vyg~~~~~~~~  148 (699)
T 1z45_A           83 -------YKIDSVIHFAGLKAVG--ESTQIPLRYYHNNILGTVVLLELMQQY----N-VSKFVFSSSATVYGDATRFPNM  148 (699)
T ss_dssp             -------SCCCEEEECCSCCCHH--HHHHSHHHHHHHHHHHHHHHHHHHHHH----T-CCEEEEEEEGGGGCCGGGSTTC
T ss_pred             -------CCCCEEEECCcccCcC--ccccCHHHHHHHHHHHHHHHHHHHHHc----C-CCEEEEECcHHHhCCCcccccc
Confidence                   1599999999975321  012334678999999999998876443    2 4799999998765322110000


Q ss_pred             ccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCC
Q 017812          216 ETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTN  274 (365)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~  274 (365)
                      .     ...+..+..+...|+.||++.+.+++.++.+.    ..+++++.++|+.+-.+
T Consensus       149 ~-----~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----~~g~~~~ilR~~~vyG~  198 (699)
T 1z45_A          149 I-----PIPEECPLGPTNPYGHTKYAIENILNDLYNSD----KKSWKFAILRYFNPIGA  198 (699)
T ss_dssp             C-----SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS----TTSCEEEEEEECEEECC
T ss_pred             C-----CccccCCCCCCChHHHHHHHHHHHHHHHHHhc----cCCCcEEEEEeccccCC
Confidence            0     01111334456789999999999999998774    36899999999988654

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.80  E-value=1.7e-18  Score=175.47  Aligned_cols=237  Identities=10%  Similarity=0.080  Sum_probs=159.5

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHC-CCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhh-HHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSRE-GFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQS-VLKFKDSLQQ  134 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~-G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~-v~~~~~~~~~  134 (365)
                      +++++|+||||+|+||.+++++|+++ |++|++++|+.++.++.       ....++.++.+|++|.++ +.++++    
T Consensus       313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~-------~~~~~v~~v~~Dl~d~~~~~~~~~~----  381 (660)
T 1z7e_A          313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRF-------LNHPHFHFVEGDISIHSEWIEYHVK----  381 (660)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGG-------TTCTTEEEEECCTTTCHHHHHHHHH----
T ss_pred             ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhh-------ccCCceEEEECCCCCcHHHHHHhhc----
Confidence            57899999999999999999999998 89999999987654221       113478899999999765 444432    


Q ss_pred             HHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc-cC
Q 017812          135 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA-QV  213 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~-~~  213 (365)
                               ++|+|||+||...+.  ...++.++.+++|+.++..+++++.+.    +  +++|++||.+.+..... .+
T Consensus       382 ---------~~D~Vih~Aa~~~~~--~~~~~~~~~~~~Nv~gt~~ll~aa~~~----~--~r~V~~SS~~vyg~~~~~~~  444 (660)
T 1z7e_A          382 ---------KCDVVLPLVAIATPI--EYTRNPLRVFELDFEENLRIIRYCVKY----R--KRIIFPSTSEVYGMCSDKYF  444 (660)
T ss_dssp             ---------HCSEEEECCCCCCTH--HHHHSHHHHHHHHTHHHHHHHHHHHHT----T--CEEEEECCGGGGBTCCSSSB
T ss_pred             ---------CCCEEEECceecCcc--ccccCHHHHHHhhhHHHHHHHHHHHHh----C--CEEEEEecHHHcCCCCCccc
Confidence                     289999999975421  123456789999999999999888653    2  69999999876633211 11


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc-------hhHHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV-------PSFLSLM  286 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~-------~~~~~~~  286 (365)
                      +.+....  . ......+...|+.||++.+.+++.++++.      |+++++++||.+.++.....       .......
T Consensus       445 ~E~~~~~--~-~~p~~~p~~~Y~~sK~~~E~~~~~~~~~~------gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~  515 (660)
T 1z7e_A          445 DEDHSNL--I-VGPVNKPRWIYSVSKQLLDRVIWAYGEKE------GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQL  515 (660)
T ss_dssp             CTTTCCE--E-ECCTTCTTHHHHHHHHHHHHHHHHHHHHH------CCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHH
T ss_pred             CCCcccc--c-cCcccCCCCCcHHHHHHHHHHHHHHHHHc------CCCEEEECCCcccCCCccccccccccccchHHHH
Confidence            1110000  0 00011345689999999999999998763      78999999999988764321       0011111


Q ss_pred             HHHHH--HHh---------cCCCCHHHHHHHHHHHhcCCC-CCcccEEeCCCCc-cc
Q 017812          287 AFTVL--KLL---------GLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKGR-TV  330 (365)
Q Consensus       287 ~~~~~--~~~---------~~~~~p~e~A~~i~~~~l~~~-~~~G~~~~~~~g~-~~  330 (365)
                      .....  .+.         ..+..++|+|++++.++.... ...|..|..++|+ ++
T Consensus       516 ~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~~~g~~~ni~~~~~~~  572 (660)
T 1z7e_A          516 ILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEA  572 (660)
T ss_dssp             HHHHHHTCCEEEEGGGCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCGGGEE
T ss_pred             HHHHHcCCCcEEeCCCCeEEEEEEHHHHHHHHHHHHhCccccCCCeEEEECCCCCCc
Confidence            11100  011         024569999999997665433 2467888877775 55

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.80  E-value=2.1e-18  Score=159.17  Aligned_cols=223  Identities=10%  Similarity=0.042  Sum_probs=150.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .+++++||||+|+||.+++++|+++|++|++++|+.                      .+|++|.+++.+++++.     
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~----------------------~~D~~d~~~~~~~~~~~-----   54 (321)
T 1e6u_A            2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD----------------------ELNLLDSRAVHDFFASE-----   54 (321)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT----------------------TCCTTCHHHHHHHHHHH-----
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc----------------------cCCccCHHHHHHHHHhc-----
Confidence            357899999999999999999999999999988862                      27999998887776532     


Q ss_pred             ccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc-cCCCc
Q 017812          138 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA-QVNNE  216 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~-~~~~~  216 (365)
                            ++|+|||+||..... ....++.+..+++|+.++..+++++.+.    + .+++|++||.+.+..... ..+++
T Consensus        55 ------~~d~vih~a~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~~v~~SS~~vyg~~~~~~~~E~  122 (321)
T 1e6u_A           55 ------RIDQVYLAAAKVGGI-VANNTYPADFIYQNMMIESNIIHAAHQN----D-VNKLLFLGSSCIYPKLAKQPMAES  122 (321)
T ss_dssp             ------CCSEEEECCCCCCCH-HHHHHCHHHHHHHHHHHHHHHHHHHHHT----T-CCEEEEECCGGGSCTTCCSSBCGG
T ss_pred             ------CCCEEEEcCeecCCc-chhhhCHHHHHHHHHHHHHHHHHHHHHh----C-CCeEEEEccHHHcCCCCCCCcCcc
Confidence                  499999999975311 1123456788999999999999988653    2 469999999877643211 11111


Q ss_pred             cccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccch---hHHHHHHHHHH--
Q 017812          217 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP---SFLSLMAFTVL--  291 (365)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~---~~~~~~~~~~~--  291 (365)
                      ...     .....+....|+.||++.+.+++.++.+.      |+++++++||.+..+......   ...........  
T Consensus       123 ~~~-----~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~------~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~  191 (321)
T 1e6u_A          123 ELL-----QGTLEPTNEPYAIAKIAGIKLCESYNRQY------GRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEA  191 (321)
T ss_dssp             GTT-----SSCCCGGGHHHHHHHHHHHHHHHHHHHHH------CCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHH
T ss_pred             ccc-----cCCCCCCCCccHHHHHHHHHHHHHHHHHh------CCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHh
Confidence            000     00122334689999999999999988753      789999999999877543210   11111111110  


Q ss_pred             -----HHh---c------CCCCHHHHHHHHHHHhcCCCCC-------cccEEeCCCCccc
Q 017812          292 -----KLL---G------LLQSPEKGINSVLDAALAPPET-------SGVYFFGGKGRTV  330 (365)
Q Consensus       292 -----~~~---~------~~~~p~e~A~~i~~~~l~~~~~-------~G~~~~~~~g~~~  330 (365)
                           .+.   +      .+..++|+|++++.++..+...       .|..|...+++++
T Consensus       192 ~~~g~~~~~~~~~g~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~~  251 (321)
T 1e6u_A          192 TAQKAPDVVVWGSGTPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDC  251 (321)
T ss_dssp             HHHTCSEEEEESCSCCEECEEEHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCE
T ss_pred             hhcCCCceEEcCCCCEEEEeEEHHHHHHHHHHHHhCcccccccccccCCceEEeCCCCCc
Confidence                 011   1      2347899999999766544321       2455665666655

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.80  E-value=1.4e-18  Score=159.71  Aligned_cols=228  Identities=11%  Similarity=0.003  Sum_probs=152.1

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      +++++|+||||+|+||++++++|+++|+      +...             ....+..+.+|++|.+++.++++.     
T Consensus         4 ~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~-------------~~~~~~~~~~D~~d~~~~~~~~~~-----   59 (319)
T 4b8w_A            4 FQSMRILVTGGSGLVGKAIQKVVADGAG------LPGE-------------DWVFVSSKDADLTDTAQTRALFEK-----   59 (319)
T ss_dssp             CCCCEEEEETCSSHHHHHHHHHHHTTTC------CTTC-------------EEEECCTTTCCTTSHHHHHHHHHH-----
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhcCC------cccc-------------cccccCceecccCCHHHHHHHHhh-----
Confidence            5678999999999999999999999998      1100             012344457899999988877653     


Q ss_pred             hccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc-cCCC
Q 017812          137 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA-QVNN  215 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~-~~~~  215 (365)
                            .++|+|||+||..... ..+.++.+..+++|+.|+..+++++...    + ..++|++||.+.+..... ..++
T Consensus        60 ------~~~d~Vih~A~~~~~~-~~~~~~~~~~~~~nv~gt~~ll~a~~~~----~-~~~~v~~SS~~vyg~~~~~~~~E  127 (319)
T 4b8w_A           60 ------VQPTHVIHLAAMVGGL-FRNIKYNLDFWRKNVHMNDNVLHSAFEV----G-ARKVVSCLSTCIFPDKTTYPIDE  127 (319)
T ss_dssp             ------SCCSEEEECCCCCCCH-HHHTTCHHHHHHHHHHHHHHHHHHHHHT----T-CSEEEEECCGGGSCSSCCSSBCG
T ss_pred             ------cCCCEEEECceecccc-cccccCHHHHHHHHHHHHHHHHHHHHHc----C-CCeEEEEcchhhcCCCCCCCccc
Confidence                  2599999999984321 1123455678999999999999988543    2 469999999876633211 1111


Q ss_pred             ccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc-------hhHHHHHHH
Q 017812          216 ETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV-------PSFLSLMAF  288 (365)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~-------~~~~~~~~~  288 (365)
                      +...     ...+.+....|+.||++.+.+++.++++.      |++++.++||.+-.+.....       +........
T Consensus       128 ~~~~-----~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~------~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~  196 (319)
T 4b8w_A          128 TMIH-----NGPPHNSNFGYSYAKRMIDVQNRAYFQQY------GCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHL  196 (319)
T ss_dssp             GGGG-----BSCCCSSSHHHHHHHHHHHHHHHHHHHHH------CCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHH
T ss_pred             cccc-----cCCCCCCcchHHHHHHHHHHHHHHHHHhh------CCCEEEEeeccccCCCCCCCCccccccHHHHHHHHH
Confidence            1100     00233334479999999999999998764      68999999999987754321       111111000


Q ss_pred             HHHH--Hh---c------CCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcccc
Q 017812          289 TVLK--LL---G------LLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  331 (365)
Q Consensus       289 ~~~~--~~---~------~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~~  331 (365)
                      ....  +.   +      .+..++|+|++++.++..++...|..|...+|++..
T Consensus       197 ~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~ni~~~~~~s  250 (319)
T 4b8w_A          197 AKSSGSALTVWGTGNPRRQFIYSLDLAQLFIWVLREYNEVEPIILSVGEEDEVS  250 (319)
T ss_dssp             HHHHTCCEEEESCSCCEECEEEHHHHHHHHHHHHHHCCCSSCEEECCCGGGCEE
T ss_pred             HhccCCceEEeCCCCeeEEEEeHHHHHHHHHHHHhccccCCceEEEecCCCcee
Confidence            0110  11   1      225789999999987766555567777777777663

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.79  E-value=3.5e-19  Score=161.92  Aligned_cols=203  Identities=14%  Similarity=0.054  Sum_probs=144.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhccC
Q 017812           61 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  140 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~~  140 (365)
                      +++||||+|+||++++++|+++|++|++++|.                       ++|++|.+++.++++..        
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~-----------------------~~D~~d~~~~~~~~~~~--------   55 (287)
T 3sc6_A            7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKK-----------------------LLDITNISQVQQVVQEI--------   55 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHSCTTTEEEEEECTT-----------------------TSCTTCHHHHHHHHHHH--------
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeccc-----------------------ccCCCCHHHHHHHHHhc--------
Confidence            79999999999999999999999999999992                       37999999888877643        


Q ss_pred             CCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCccccc
Q 017812          141 MHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITG  220 (365)
Q Consensus       141 ~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~~~~  220 (365)
                         ++|++||+||.....  ...++.+..+++|+.++..+++++.+.      +.++|++||...+.....         
T Consensus        56 ---~~d~vi~~a~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~v~~SS~~vy~~~~~---------  115 (287)
T 3sc6_A           56 ---RPHIIIHCAAYTKVD--QAEKERDLAYVINAIGARNVAVASQLV------GAKLVYISTDYVFQGDRP---------  115 (287)
T ss_dssp             ---CCSEEEECCCCCCHH--HHTTCHHHHHHHHTHHHHHHHHHHHHH------TCEEEEEEEGGGSCCCCS---------
T ss_pred             ---CCCEEEECCcccChH--HHhcCHHHHHHHHHHHHHHHHHHHHHc------CCeEEEEchhhhcCCCCC---------
Confidence               489999999985321  122467889999999999999998654      258999999876633211         


Q ss_pred             cccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHH--HHh----
Q 017812          221 KFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVL--KLL----  294 (365)
Q Consensus       221 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~--~~~----  294 (365)
                      ..+.+..+..+...|+.||.+.+.+++.++       .   .++.++||.+..+........   ......  .+.    
T Consensus       116 ~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~-------~---~~~ilR~~~v~G~~~~~~~~~---~~~~~~~~~~~~~~~  182 (287)
T 3sc6_A          116 EGYDEFHNPAPINIYGASKYAGEQFVKELH-------N---KYFIVRTSWLYGKYGNNFVKT---MIRLGKEREEISVVA  182 (287)
T ss_dssp             SCBCTTSCCCCCSHHHHHHHHHHHHHHHHC-------S---SEEEEEECSEECSSSCCHHHH---HHHHHTTCSEEEEEC
T ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHHHHHhC-------C---CcEEEeeeeecCCCCCcHHHH---HHHHHHcCCCeEeec
Confidence            111222455567899999999998887653       2   357899999987754332111   110000  011    


Q ss_pred             ---cCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017812          295 ---GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  330 (365)
Q Consensus       295 ---~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~  330 (365)
                         ..+..++|+|++++.++..+.   +..|...+|+++
T Consensus       183 ~~~~~~i~v~Dva~~~~~~~~~~~---~~~~~i~~~~~~  218 (287)
T 3sc6_A          183 DQIGSPTYVADLNVMINKLIHTSL---YGTYHVSNTGSC  218 (287)
T ss_dssp             SCEECCEEHHHHHHHHHHHHTSCC---CEEEECCCBSCE
T ss_pred             CcccCceEHHHHHHHHHHHHhCCC---CCeEEEcCCCcc
Confidence               123459999999997665444   446666777665

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.79  E-value=2.5e-18  Score=158.41  Aligned_cols=167  Identities=11%  Similarity=0.086  Sum_probs=126.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHC--CCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhc
Q 017812           61 VCIVTGATSGLGAAAAYALSRE--GFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  138 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~--G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~  138 (365)
                      +|+||||+|+||++++++|+++  |++|++++|+....+             .+.++.+|++|.+++.+++++       
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-------------~~~~~~~D~~d~~~~~~~~~~-------   60 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG-------------GIKFITLDVSNRDEIDRAVEK-------   60 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT-------------TCCEEECCTTCHHHHHHHHHH-------
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc-------------CceEEEecCCCHHHHHHHHhh-------
Confidence            3899999999999999999999  899999999764321             356889999999988877653       


Q ss_pred             cCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCccc
Q 017812          139 SDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETI  218 (365)
Q Consensus       139 ~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~~  218 (365)
                          .++|+|||+||....   ...++.+..+++|+.++..+++++.+.    + .+++|++||.+.+........    
T Consensus        61 ----~~~d~vih~a~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~~~----~-~~~~v~~SS~~~~~~~~~~~~----  124 (317)
T 3ajr_A           61 ----YSIDAIFHLAGILSA---KGEKDPALAYKVNMNGTYNILEAAKQH----R-VEKVVIPSTIGVFGPETPKNK----  124 (317)
T ss_dssp             ----TTCCEEEECCCCCHH---HHHHCHHHHHHHHHHHHHHHHHHHHHT----T-CCEEEEEEEGGGCCTTSCSSS----
T ss_pred             ----cCCcEEEECCcccCC---ccccChHHHhhhhhHHHHHHHHHHHHc----C-CCEEEEecCHHHhCCCCCCCC----
Confidence                259999999997532   123567789999999999999988653    2 469999999887643211000    


Q ss_pred             cccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccC
Q 017812          219 TGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKT  273 (365)
Q Consensus       219 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T  273 (365)
                          ..+..+..+...|+.||++.+.+++.++.+      .|++++.++|+.+-.
T Consensus       125 ----~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~------~~~~~~~lR~~~~~g  169 (317)
T 3ajr_A          125 ----VPSITITRPRTMFGVTKIAAELLGQYYYEK------FGLDVRSLRYPGIIS  169 (317)
T ss_dssp             ----BCSSSCCCCCSHHHHHHHHHHHHHHHHHHH------HCCEEEEEEECEEEC
T ss_pred             ----ccccccCCCCchHHHHHHHHHHHHHHHHHh------cCCeEEEEecCcEec
Confidence                111134445778999999999999988765      378999998665543

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.79  E-value=2.7e-19  Score=165.04  Aligned_cols=225  Identities=15%  Similarity=0.009  Sum_probs=143.9

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      +.+++|+||||||+||.+++++|+++|++|++++|+........+.+........+.++.+|++                
T Consensus         5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~----------------   68 (321)
T 3vps_A            5 TLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS----------------   68 (321)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT----------------
T ss_pred             cCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc----------------
Confidence            4578999999999999999999999999999999986510000000100001123333444443                


Q ss_pred             hccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017812          137 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  216 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~  216 (365)
                             ++|+|||+||......  ..+..+..++ |+.++..+++++...-     .+++|++||...+......    
T Consensus        69 -------~~d~vi~~a~~~~~~~--~~~~~~~~~~-n~~~~~~ll~a~~~~~-----v~~~v~~SS~~v~~~~~~~----  129 (321)
T 3vps_A           69 -------DVRLVYHLASHKSVPR--SFKQPLDYLD-NVDSGRHLLALCTSVG-----VPKVVVGSTCEVYGQADTL----  129 (321)
T ss_dssp             -------TEEEEEECCCCCCHHH--HTTSTTTTHH-HHHHHHHHHHHHHHHT-----CCEEEEEEEGGGGCSCSSS----
T ss_pred             -------cCCEEEECCccCChHH--HHhCHHHHHH-HHHHHHHHHHHHHHcC-----CCeEEEecCHHHhCCCCCC----
Confidence                   4999999999754211  1122344566 9999999999886542     3699999998876332110    


Q ss_pred             cccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCe-EEEEecCCcccCCccccchhHHHHHHHH-HHHHh
Q 017812          217 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHV-SVIAADPGVVKTNIMREVPSFLSLMAFT-VLKLL  294 (365)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi-~v~~v~PG~v~T~~~~~~~~~~~~~~~~-~~~~~  294 (365)
                           .+.+..+..+...|+.||++.+.+++.++.+      .|+ +++.++||.+.++............... ...+.
T Consensus       130 -----~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~------~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~  198 (321)
T 3vps_A          130 -----PTPEDSPLSPRSPYAASKVGLEMVAGAHQRA------SVAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNEL  198 (321)
T ss_dssp             -----SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHS------SSSCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSEE
T ss_pred             -----CCCCCCCCCCCChhHHHHHHHHHHHHHHHHH------cCCCceEEEEeccccCcCCCCCChHHHHHHHHHcCCCe
Confidence                 1112244556788999999999999998864      578 9999999999887654311111111111 11111


Q ss_pred             c---------CCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017812          295 G---------LLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  330 (365)
Q Consensus       295 ~---------~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~  330 (365)
                      .         .+..++|+|++++.++..+.  .| .|...+|+++
T Consensus       199 ~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~--~g-~~~i~~~~~~  240 (321)
T 3vps_A          199 PVEGDGEQRRDFTYITDVVDKLVALANRPL--PS-VVNFGSGQSL  240 (321)
T ss_dssp             EEETTSCCEECEEEHHHHHHHHHHGGGSCC--CS-EEEESCSCCE
T ss_pred             EEeCCCCceEceEEHHHHHHHHHHHHhcCC--CC-eEEecCCCcc
Confidence            1         23489999999996554433  37 7777777766

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.77  E-value=1.1e-18  Score=158.72  Aligned_cols=212  Identities=9%  Similarity=-0.012  Sum_probs=145.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      ++++|+||| +|+||++++++|+++|++|++++|+.+++            ...+.++.+|++|.+++.++++       
T Consensus         2 ~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~------------~~~~~~~~~Dl~d~~~~~~~~~-------   61 (286)
T 3gpi_A            2 SLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM------------PAGVQTLIADVTRPDTLASIVH-------   61 (286)
T ss_dssp             CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC------------CTTCCEEECCTTCGGGCTTGGG-------
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc------------ccCCceEEccCCChHHHHHhhc-------
Confidence            457899999 59999999999999999999999987642            3467899999999988766543       


Q ss_pred             ccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcc
Q 017812          138 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNET  217 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~  217 (365)
                           +++|++||+||..       ..+.+..+++|+.++..+++++..    .+ .+++|++||.+.+.....      
T Consensus        62 -----~~~d~vih~a~~~-------~~~~~~~~~~n~~~~~~ll~a~~~----~~-~~~~v~~SS~~vyg~~~~------  118 (286)
T 3gpi_A           62 -----LRPEILVYCVAAS-------EYSDEHYRLSYVEGLRNTLSALEG----AP-LQHVFFVSSTGVYGQEVE------  118 (286)
T ss_dssp             -----GCCSEEEECHHHH-------HHC-----CCSHHHHHHHHHHTTT----SC-CCEEEEEEEGGGCCCCCS------
T ss_pred             -----CCCCEEEEeCCCC-------CCCHHHHHHHHHHHHHHHHHHHhh----CC-CCEEEEEcccEEEcCCCC------
Confidence                 3599999999963       244577889999999999988852    22 479999999876633211      


Q ss_pred             ccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHH----HH
Q 017812          218 ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVL----KL  293 (365)
Q Consensus       218 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~----~~  293 (365)
                         ..+.+..+..+...|+.||.+.+.+ +..           ++++.++||.+..+....+..   .......    ..
T Consensus       119 ---~~~~E~~~~~p~~~Y~~sK~~~E~~-~~~-----------~~~~ilR~~~v~G~~~~~~~~---~~~~~~~~~~~~~  180 (286)
T 3gpi_A          119 ---EWLDEDTPPIAKDFSGKRMLEAEAL-LAA-----------YSSTILRFSGIYGPGRLRMIR---QAQTPEQWPARNA  180 (286)
T ss_dssp             ---SEECTTSCCCCCSHHHHHHHHHHHH-GGG-----------SSEEEEEECEEEBTTBCHHHH---HTTCGGGSCSSBC
T ss_pred             ---CCCCCCCCCCCCChhhHHHHHHHHH-Hhc-----------CCeEEEecccccCCCchhHHH---HHHhcccCCCcCc
Confidence               1112224555678899999998876 321           678999999998775432110   0000000    00


Q ss_pred             hcCCCCHHHHHHHHHHHhcCCC-CCcccEEeCCCCccc
Q 017812          294 LGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKGRTV  330 (365)
Q Consensus       294 ~~~~~~p~e~A~~i~~~~l~~~-~~~G~~~~~~~g~~~  330 (365)
                      ...+..++|+|++++.++..+. ...|..|...+|+++
T Consensus       181 ~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (286)
T 3gpi_A          181 WTNRIHRDDGAAFIAYLIQQRSHAVPERLYIVTDNQPL  218 (286)
T ss_dssp             EECEEEHHHHHHHHHHHHHHHTTSCCCSEEEECCSCCE
T ss_pred             eeEEEEHHHHHHHHHHHHhhhccCCCCceEEEeCCCCC
Confidence            1134578999999997665532 345667777777766

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.77  E-value=6.5e-18  Score=166.02  Aligned_cols=235  Identities=14%  Similarity=0.090  Sum_probs=156.0

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchh---HHHHHHHHHhh-------cCCCceEEEEecCCChhhHHHH
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHL---LSETMADITSR-------NKDARLEAFQVDLSSFQSVLKF  128 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~---~~~~~~~l~~~-------~~~~~~~~~~~Dls~~~~v~~~  128 (365)
                      .++|+||||||+||.+++++|.+.|++|++++|+...   .+.+.+.+...       ....++.++.+|+++++++.  
T Consensus       150 ~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~--  227 (508)
T 4f6l_B          150 LGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV--  227 (508)
T ss_dssp             CEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC--
T ss_pred             CCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC--
Confidence            5799999999999999999999999999999999873   33333333221       11458999999999988776  


Q ss_pred             HHHHHHHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccc
Q 017812          129 KDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNV  208 (365)
Q Consensus       129 ~~~~~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~  208 (365)
                           .       ..++|+||||||....     ....+..+++|+.++..+++++.+    .  ..++|++||.+. ..
T Consensus       228 -----~-------~~~~D~Vih~Aa~~~~-----~~~~~~~~~~Nv~gt~~ll~~a~~----~--~~~~v~iSS~~v-G~  283 (508)
T 4f6l_B          228 -----L-------PENMDTIIHAGARTDH-----FGDDDEFEKVNVQGTVDVIRLAQQ----H--HARLIYVSTISV-GT  283 (508)
T ss_dssp             -----C-------SSCCSEEEECCCC-------------CCHHHHHHHHHHHHHHHHT----T--TCEEEEEEESCT-TS
T ss_pred             -----C-------ccCCCEEEECCceecC-----CCCHHHHhhhHHHHHHHHHHHHHh----C--CCcEEEeCChhh-cc
Confidence                 1       2579999999997532     235677899999999999998865    1  479999999887 22


Q ss_pred             cccc-CCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc-----h-h
Q 017812          209 FNAQ-VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV-----P-S  281 (365)
Q Consensus       209 ~~~~-~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~-----~-~  281 (365)
                      +... ...........  ..+..+...|+.||.+.+.+++.++       ..|++++.++||.|..+.....     . .
T Consensus       284 ~~~~~~~~~~~~E~~~--~~~~~~~~~Y~~sK~~~E~~~~~~~-------~~gi~~~ilRp~~v~G~~~~~~~~~~~~~~  354 (508)
T 4f6l_B          284 YFDIDTEDVTFSEADV--YKGQLLTSPYTRSKFYSELKVLEAV-------NNGLDGRIVRVGNLTSPYNGRWHMRNIKTN  354 (508)
T ss_dssp             EECTTCSCCEECTTCS--CSSBCCCSHHHHHHHHHHHHHHHHH-------HTTCEEEEEEECCEESCSSSCCCCTTCTTC
T ss_pred             CCccCCcCcccccccc--cccccCCCcHHHHHHHHHHHHHHHH-------HcCCCEEEEecceeccCCCCCcccCCcchH
Confidence            2111 11111111100  0112356789999999999988765       2589999999999977754332     0 0


Q ss_pred             HHHHHHHHHHHHhc-----------CCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcccc
Q 017812          282 FLSLMAFTVLKLLG-----------LLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  331 (365)
Q Consensus       282 ~~~~~~~~~~~~~~-----------~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~~  331 (365)
                      ...... ......+           .+..++++|+++++++..+.  .|..|...+++++.
T Consensus       355 ~~~~~i-~~~~~~~~~~~~~g~~~~~~v~v~DvA~ai~~~~~~~~--~~~~~nl~~~~~~s  412 (508)
T 4f6l_B          355 RFSMVM-NDLLQLDCIGVSMAEMPVDFSFVDTTARQIVALAQVNT--PQIIYHVLSPNKMP  412 (508)
T ss_dssp             HHHHHH-HHHTTCSEEETTGGGSEEECEEHHHHHHHHHHHTTBCC--SCSEEEESCSCEEE
T ss_pred             HHHHHH-HHHHHcCCCCCCccCceEEEEcHHHHHHHHHHHHhCCC--CCCEEEeCCCCCCC
Confidence            011111 1110000           14568999999997665544  66777777777763

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.77  E-value=1.9e-18  Score=157.91  Aligned_cols=211  Identities=12%  Similarity=0.019  Sum_probs=145.9

Q ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhccC
Q 017812           61 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  140 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~~  140 (365)
                      +++||||+|+||.+++++|+ +|++|++++|+.+                   .+.+|++|.+++.++++..        
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~-------------------~~~~D~~d~~~~~~~~~~~--------   53 (299)
T 1n2s_A            2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK-------------------EFCGDFSNPKGVAETVRKL--------   53 (299)
T ss_dssp             EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS-------------------SSCCCTTCHHHHHHHHHHH--------
T ss_pred             eEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc-------------------cccccCCCHHHHHHHHHhc--------
Confidence            59999999999999999999 8999999999751                   3578999998887776542        


Q ss_pred             CCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCccccc
Q 017812          141 MHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITG  220 (365)
Q Consensus       141 ~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~~~~  220 (365)
                         ++|++||+||.....  .+.++.+..+++|+.++..+++++.+    .+  .++|++||.+.+......        
T Consensus        54 ---~~d~vih~a~~~~~~--~~~~~~~~~~~~n~~~~~~l~~a~~~----~~--~~~v~~SS~~vy~~~~~~--------  114 (299)
T 1n2s_A           54 ---RPDVIVNAAAHTAVD--KAESEPELAQLLNATSVEAIAKAANE----TG--AWVVHYSTDYVFPGTGDI--------  114 (299)
T ss_dssp             ---CCSEEEECCCCCCHH--HHTTCHHHHHHHHTHHHHHHHHHHTT----TT--CEEEEEEEGGGSCCCTTC--------
T ss_pred             ---CCCEEEECcccCCHh--hhhcCHHHHHHHHHHHHHHHHHHHHH----cC--CcEEEEecccEEeCCCCC--------
Confidence               489999999975321  12345678899999999999998843    22  489999998776432210        


Q ss_pred             cccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHH-HHh-----
Q 017812          221 KFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVL-KLL-----  294 (365)
Q Consensus       221 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~-~~~-----  294 (365)
                       .+.+..+..+...|+.||++.+.+++.++       .   +++.++||.+.++........  ....... .+.     
T Consensus       115 -~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~-------~---~~~ilRp~~v~G~~~~~~~~~--~~~~~~~~~~~~~~~~  181 (299)
T 1n2s_A          115 -PWQETDATSPLNVYGKTKLAGEKALQDNC-------P---KHLIFRTSWVYAGKGNNFAKT--MLRLAKERQTLSVIND  181 (299)
T ss_dssp             -CBCTTSCCCCSSHHHHHHHHHHHHHHHHC-------S---SEEEEEECSEECSSSCCHHHH--HHHHHHHCSEEEEECS
T ss_pred             -CCCCCCCCCCccHHHHHHHHHHHHHHHhC-------C---CeEEEeeeeecCCCcCcHHHH--HHHHHhcCCCEEeecC
Confidence             11111344456789999999998886653       2   688999999988764422111  1100000 011     


Q ss_pred             --cCCCCHHHHHHHHHHHhcCCC-CC-cccEEeCCCCcccc
Q 017812          295 --GLLQSPEKGINSVLDAALAPP-ET-SGVYFFGGKGRTVN  331 (365)
Q Consensus       295 --~~~~~p~e~A~~i~~~~l~~~-~~-~G~~~~~~~g~~~~  331 (365)
                        ..+..++|+|++++.++..+. .. .|..|...+|+++.
T Consensus       182 ~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~i~~~~~~s  222 (299)
T 1n2s_A          182 QYGAPTGAELLADCTAHAIRVALNKPEVAGLYHLVAGGTTT  222 (299)
T ss_dssp             CEECCEEHHHHHHHHHHHHHHHHHCGGGCEEEECCCBSCEE
T ss_pred             cccCCeeHHHHHHHHHHHHHHhccccccCceEEEeCCCCCC
Confidence              122358999999997665432 22 46677777777663

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.75  E-value=4.5e-18  Score=154.48  Aligned_cols=199  Identities=11%  Similarity=-0.045  Sum_probs=139.2

Q ss_pred             CEEEEecCCChHHHHHHHHHHHC--CCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           60 PVCIVTGATSGLGAAAAYALSRE--GFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~--G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      |+++||||||+||++++++|+++  |++|++++|+.++.+++.    .    ..+.++.+|++|.+++.++++       
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~----~----~~~~~~~~D~~d~~~l~~~~~-------   65 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLA----D----QGVEVRHGDYNQPESLQKAFA-------   65 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHH----H----TTCEEEECCTTCHHHHHHHTT-------
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHh----h----cCCeEEEeccCCHHHHHHHHh-------
Confidence            46999999999999999999999  999999999987654332    1    256789999999988766542       


Q ss_pred             ccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcc
Q 017812          138 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNET  217 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~  217 (365)
                            .+|++||+||.. .    . +      ++|+.++..+++++..    .+ .++||++||....           
T Consensus        66 ------~~d~vi~~a~~~-~----~-~------~~n~~~~~~l~~a~~~----~~-~~~~v~~Ss~~~~-----------  111 (287)
T 2jl1_A           66 ------GVSKLLFISGPH-Y----D-N------TLLIVQHANVVKAARD----AG-VKHIAYTGYAFAE-----------  111 (287)
T ss_dssp             ------TCSEEEECCCCC-S----C-H------HHHHHHHHHHHHHHHH----TT-CSEEEEEEETTGG-----------
T ss_pred             ------cCCEEEEcCCCC-c----C-c------hHHHHHHHHHHHHHHH----cC-CCEEEEECCCCCC-----------
Confidence                  489999999962 1    1 1      6799999888888743    22 4699999998754           


Q ss_pred             ccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcccc-chhHHHHHHHHH--HHHh
Q 017812          218 ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE-VPSFLSLMAFTV--LKLL  294 (365)
Q Consensus       218 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~-~~~~~~~~~~~~--~~~~  294 (365)
                               ..   ...|+.+|.+.+.+.+.          .|++++.++||++.++.... +...........  ....
T Consensus       112 ---------~~---~~~y~~~K~~~E~~~~~----------~~~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (287)
T 2jl1_A          112 ---------ES---IIPLAHVHLATEYAIRT----------TNIPYTFLRNALYTDFFVNEGLRASTESGAIVTNAGSGI  169 (287)
T ss_dssp             ---------GC---CSTHHHHHHHHHHHHHH----------TTCCEEEEEECCBHHHHSSGGGHHHHHHTEEEESCTTCC
T ss_pred             ---------CC---CCchHHHHHHHHHHHHH----------cCCCeEEEECCEeccccchhhHHHHhhCCceeccCCCCc
Confidence                     11   12699999999887742          47889999999987654211 111000000000  0001


Q ss_pred             cCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017812          295 GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  330 (365)
Q Consensus       295 ~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~  330 (365)
                      ..+..++|+|++++.++.. +...|+.|...++++.
T Consensus       170 ~~~i~~~Dva~~~~~~~~~-~~~~g~~~~i~~~~~~  204 (287)
T 2jl1_A          170 VNSVTRNELALAAATVLTE-EGHENKTYNLVSNQPW  204 (287)
T ss_dssp             BCCBCHHHHHHHHHHHHTS-SSCTTEEEEECCSSCB
T ss_pred             cCccCHHHHHHHHHHHhcC-CCCCCcEEEecCCCcC
Confidence            1457999999999976544 3346777777777665

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.71  E-value=1.5e-17  Score=150.93  Aligned_cols=196  Identities=10%  Similarity=-0.016  Sum_probs=130.9

Q ss_pred             EEEEecCCChHHHHHHHHHHHC--CCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhc
Q 017812           61 VCIVTGATSGLGAAAAYALSRE--GFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  138 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~--G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~  138 (365)
                      +++||||+|+||++++++|+++  |++|++++|++++.+++.    .    ..+.++.+|++|.+++.+++         
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~----~----~~~~~~~~D~~d~~~~~~~~---------   63 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALA----A----QGITVRQADYGDEAALTSAL---------   63 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHH----H----TTCEEEECCTTCHHHHHHHT---------
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhh----c----CCCeEEEcCCCCHHHHHHHH---------
Confidence            3899999999999999999999  999999999987654322    1    25678999999998876654         


Q ss_pred             cCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCccc
Q 017812          139 SDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETI  218 (365)
Q Consensus       139 ~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~~  218 (365)
                          ..+|++||+||...              ..|+.++..+++++..    .+ .++||++||....            
T Consensus        64 ----~~~d~vi~~a~~~~--------------~~~~~~~~~l~~a~~~----~~-~~~~v~~Ss~~~~------------  108 (286)
T 2zcu_A           64 ----QGVEKLLLISSSEV--------------GQRAPQHRNVINAAKA----AG-VKFIAYTSLLHAD------------  108 (286)
T ss_dssp             ----TTCSEEEECC----------------------CHHHHHHHHHHH----HT-CCEEEEEEETTTT------------
T ss_pred             ----hCCCEEEEeCCCCc--------------hHHHHHHHHHHHHHHH----cC-CCEEEEECCCCCC------------
Confidence                24899999999521              1366666666666543    22 4799999998754            


Q ss_pred             cccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHH-H-HHHhcC
Q 017812          219 TGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFT-V-LKLLGL  296 (365)
Q Consensus       219 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~-~-~~~~~~  296 (365)
                              .   ....|+.+|.+.+.+.+.          .|++++.++||++.++....+.......... . ......
T Consensus       109 --------~---~~~~y~~sK~~~e~~~~~----------~~~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (286)
T 2zcu_A          109 --------T---SPLGLADEHIETEKMLAD----------SGIVYTLLRNGWYSENYLASAPAALEHGVFIGAAGDGKIA  167 (286)
T ss_dssp             --------T---CCSTTHHHHHHHHHHHHH----------HCSEEEEEEECCBHHHHHTTHHHHHHHTEEEESCTTCCBC
T ss_pred             --------C---CcchhHHHHHHHHHHHHH----------cCCCeEEEeChHHhhhhHHHhHHhhcCCceeccCCCCccc
Confidence                    1   113699999999887742          3789999999988765432111100000000 0 001123


Q ss_pred             CCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017812          297 LQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  330 (365)
Q Consensus       297 ~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~  330 (365)
                      +..++|+|++++.++..+ ...|+.|...+++++
T Consensus       168 ~i~~~Dva~~~~~~~~~~-~~~g~~~~i~~~~~~  200 (286)
T 2zcu_A          168 SATRADYAAAAARVISEA-GHEGKVYELAGDSAW  200 (286)
T ss_dssp             CBCHHHHHHHHHHHHHSS-SCTTCEEEECCSSCB
T ss_pred             cccHHHHHHHHHHHhcCC-CCCCceEEEeCCCcC
Confidence            569999999999766543 346777777777665

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.71  E-value=5.5e-16  Score=145.42  Aligned_cols=225  Identities=14%  Similarity=0.062  Sum_probs=142.0

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCC-----CEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHH
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREG-----FHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  133 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G-----~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~  133 (365)
                      +++|+||||+|+||.+++++|+++|     ++|++++|+.....         ....++.++.+|++|.+++.++++   
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~---------~~~~~~~~~~~Dl~d~~~~~~~~~---   68 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW---------HEDNPINYVQCDISDPDDSQAKLS---   68 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC---------CCSSCCEEEECCTTSHHHHHHHHT---
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc---------cccCceEEEEeecCCHHHHHHHHh---
Confidence            4689999999999999999999999     99999999876432         113468899999999988776653   


Q ss_pred             HHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEE-------EEcCCccc
Q 017812          134 QWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIV-------NVTSFTHR  206 (365)
Q Consensus       134 ~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV-------~vsS~~~~  206 (365)
                             ...++|++||+||...       ++.+..+++|+.++..+++++.+....   ..++|       ++||.+.+
T Consensus        69 -------~~~~~d~vih~a~~~~-------~~~~~~~~~n~~~~~~l~~a~~~~~~~---~~~~v~~~g~~i~~Ss~~vy  131 (364)
T 2v6g_A           69 -------PLTDVTHVFYVTWANR-------STEQENCEANSKMFRNVLDAVIPNCPN---LKHISLQTGRKHYMGPFESY  131 (364)
T ss_dssp             -------TCTTCCEEEECCCCCC-------SSHHHHHHHHHHHHHHHHHHHTTTCTT---CCEEEEECCTHHHHCCGGGT
T ss_pred             -------cCCCCCEEEECCCCCc-------chHHHHHHHhHHHHHHHHHHHHHhccc---cceEEeccCceEEEechhhc
Confidence                   2234999999999752       246778999999999999999765321   34776       68887655


Q ss_pred             ccccccCCCccccccccccCCC-CChhhhhhhhHHHHHHHHHHHHHHhCCCCCCC-eEEEEecCCcccCCccccchhH-H
Q 017812          207 NVFNAQVNNETITGKFFLRSKC-YPCARIYEYSKLCLLIFSYELHRNLGLDKSRH-VSVIAADPGVVKTNIMREVPSF-L  283 (365)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~g-i~v~~v~PG~v~T~~~~~~~~~-~  283 (365)
                      ......  ....     .+..+ .+....|.    +.+.+++.++.      ..| ++++.++|+.+-.+........ .
T Consensus       132 g~~~~~--~~~~-----~E~~~~~~~~~~y~----~~E~~~~~~~~------~~~~~~~~ilRp~~v~G~~~~~~~~~~~  194 (364)
T 2v6g_A          132 GKIESH--DPPY-----TEDLPRLKYMNFYY----DLEDIMLEEVE------KKEGLTWSVHRPGNIFGFSPYSMMNLVG  194 (364)
T ss_dssp             TTSCCC--CSSB-----CTTSCCCSSCCHHH----HHHHHHHHHHT------TSTTCEEEEEEESSEECCCTTCSSCHHH
T ss_pred             cccccC--CCCC-----CccccCCccchhhH----HHHHHHHHHhh------cCCCceEEEECCCceeCCCCCcccchHH
Confidence            321100  0001     11111 12234562    33444444332      345 9999999999987654432111 1


Q ss_pred             HH--HHHH---HHHHh------------cCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017812          284 SL--MAFT---VLKLL------------GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  330 (365)
Q Consensus       284 ~~--~~~~---~~~~~------------~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~  330 (365)
                      ..  ....   ...+.            -.+.+.+|+|++++.++.. +...|+.|...++++.
T Consensus       195 ~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~v~Dva~a~~~~~~~-~~~~g~~~ni~~~~~~  257 (364)
T 2v6g_A          195 TLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLIAEHHIWAAVD-PYAKNEAFNVSNGDVF  257 (364)
T ss_dssp             HHHHHHHHHHHHTCCBCCCSCHHHHHSCBCCEEHHHHHHHHHHHHHC-GGGTTEEEEECCSCCB
T ss_pred             HHHHHHHHHHhcCCceecCCCcccccccCCCCcHHHHHHHHHHHHhC-CCCCCceEEecCCCcC
Confidence            11  0000   00000            0123448899999976644 3345767776766655

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.69  E-value=2.9e-17  Score=150.18  Aligned_cols=206  Identities=13%  Similarity=-0.010  Sum_probs=133.0

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCC-CEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREG-FHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G-~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      +++++||||||+||++++++|+++| ++|++++|++++...  +.+..    ..+.++.+|++|++++.++++       
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~--~~l~~----~~~~~~~~D~~d~~~l~~~~~-------   71 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA--KELRL----QGAEVVQGDQDDQVIMELALN-------   71 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH--HHHHH----TTCEEEECCTTCHHHHHHHHT-------
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH--HHHHH----CCCEEEEecCCCHHHHHHHHh-------
Confidence            5789999999999999999999999 999999999875421  22222    247889999999988876543       


Q ss_pred             ccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcc
Q 017812          138 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNET  217 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~  217 (365)
                            .+|++|||||.....          ..+.|+.++..++++    +++.+ .++||++||......         
T Consensus        72 ------~~d~vi~~a~~~~~~----------~~~~~~~~~~~~~~a----a~~~g-v~~iv~~S~~~~~~~---------  121 (299)
T 2wm3_A           72 ------GAYATFIVTNYWESC----------SQEQEVKQGKLLADL----ARRLG-LHYVVYSGLENIKKL---------  121 (299)
T ss_dssp             ------TCSEEEECCCHHHHT----------CHHHHHHHHHHHHHH----HHHHT-CSEEEECCCCCHHHH---------
T ss_pred             ------cCCEEEEeCCCCccc----------cchHHHHHHHHHHHH----HHHcC-CCEEEEEcCcccccc---------
Confidence                  389999999863211          133455555444444    44433 579999666543310         


Q ss_pred             ccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh-HHHHH-----HHHHH
Q 017812          218 ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS-FLSLM-----AFTVL  291 (365)
Q Consensus       218 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~-~~~~~-----~~~~~  291 (365)
                               .+......|+.+|++++.+.+.          .|++++.++||++.+++...+.. .....     .....
T Consensus       122 ---------~~~~~~~~y~~sK~~~e~~~~~----------~gi~~~ilrp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  182 (299)
T 2wm3_A          122 ---------TAGRLAAAHFDGKGEVEEYFRD----------IGVPMTSVRLPCYFENLLSHFLPQKAPDGKSYLLSLPTG  182 (299)
T ss_dssp             ---------TTTSCCCHHHHHHHHHHHHHHH----------HTCCEEEEECCEEGGGGGTTTCCEECTTSSSEEECCCCT
T ss_pred             ---------CCCcccCchhhHHHHHHHHHHH----------CCCCEEEEeecHHhhhchhhcCCcccCCCCEEEEEecCC
Confidence                     0111235799999999887643          36889999999998875432110 00000     00000


Q ss_pred             HHhcCCCCHHHHHHHHHHHhcCCCCCcccEEeCCC
Q 017812          292 KLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGK  326 (365)
Q Consensus       292 ~~~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~  326 (365)
                      .....+.+++|+|+.++.++..++...|+.|...+
T Consensus       183 ~~~~~~i~~~Dva~~~~~~l~~~~~~~g~~~~~~g  217 (299)
T 2wm3_A          183 DVPMDGMSVSDLGPVVLSLLKMPEKYVGQNIGLST  217 (299)
T ss_dssp             TSCEEEECGGGHHHHHHHHHHSHHHHTTCEEECCS
T ss_pred             CCccceecHHHHHHHHHHHHcChhhhCCeEEEeee
Confidence            00013458999999999776543323566666553

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.69  E-value=5e-17  Score=147.81  Aligned_cols=197  Identities=13%  Similarity=0.129  Sum_probs=127.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHC-CCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhcc
Q 017812           61 VCIVTGATSGLGAAAAYALSRE-GFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  139 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~-G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~  139 (365)
                      +|+||||||+||++++++|++. |++|++++|++++....    .    ...+.++.+|++|++++.+++          
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~----~----~~~v~~~~~D~~d~~~l~~~~----------   63 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD----W----RGKVSVRQLDYFNQESMVEAF----------   63 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG----G----BTTBEEEECCTTCHHHHHHHT----------
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh----h----hCCCEEEEcCCCCHHHHHHHH----------
Confidence            4999999999999999999998 99999999998764321    1    346889999999998877654          


Q ss_pred             CCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcccc
Q 017812          140 DMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETIT  219 (365)
Q Consensus       140 ~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~~~  219 (365)
                         .++|++||+||...+.            ..|+.++..+    ++.+++.+ .++||++||.+..             
T Consensus        64 ---~~~d~vi~~a~~~~~~------------~~~~~~~~~l----~~aa~~~g-v~~iv~~Ss~~~~-------------  110 (289)
T 3e48_A           64 ---KGMDTVVFIPSIIHPS------------FKRIPEVENL----VYAAKQSG-VAHIIFIGYYADQ-------------  110 (289)
T ss_dssp             ---TTCSEEEECCCCCCSH------------HHHHHHHHHH----HHHHHHTT-CCEEEEEEESCCS-------------
T ss_pred             ---hCCCEEEEeCCCCccc------------hhhHHHHHHH----HHHHHHcC-CCEEEEEcccCCC-------------
Confidence               3589999999974321            2255555444    44445544 5799999996532             


Q ss_pred             ccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhc----
Q 017812          220 GKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLG----  295 (365)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~----  295 (365)
                             ..    ..|..++...  +   +...+.   ..|++++.++||++.+++....+.....  .....+.+    
T Consensus       111 -------~~----~~~~~~~~~~--~---~e~~~~---~~g~~~~ilrp~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~  169 (289)
T 3e48_A          111 -------HN----NPFHMSPYFG--Y---ASRLLS---TSGIDYTYVRMAMYMDPLKPYLPELMNM--HKLIYPAGDGRI  169 (289)
T ss_dssp             -------TT----CCSTTHHHHH--H---HHHHHH---HHCCEEEEEEECEESTTHHHHHHHHHHH--TEECCCCTTCEE
T ss_pred             -------CC----CCCccchhHH--H---HHHHHH---HcCCCEEEEeccccccccHHHHHHHHHC--CCEecCCCCcee
Confidence                   11    1122333211  1   222222   4689999999999988754221110000  00000111    


Q ss_pred             CCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcccc
Q 017812          296 LLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  331 (365)
Q Consensus       296 ~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~~  331 (365)
                      .+.+++|+|++++.++..+... |+.|... ++.+.
T Consensus       170 ~~i~~~Dva~~~~~~l~~~~~~-g~~~~~~-~~~~s  203 (289)
T 3e48_A          170 NYITRNDIARGVIAIIKNPDTW-GKRYLLS-GYSYD  203 (289)
T ss_dssp             EEECHHHHHHHHHHHHHCGGGT-TCEEEEC-CEEEE
T ss_pred             eeEEHHHHHHHHHHHHcCCCcC-CceEEeC-CCcCC
Confidence            1468999999999766654433 7777767 76663

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.68  E-value=2.5e-15  Score=140.25  Aligned_cols=210  Identities=10%  Similarity=0.014  Sum_probs=134.3

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCc----hhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS----HLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  132 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~----~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~  132 (365)
                      |.+++|+||||||+||++++++|+++|++|++++|+.    ++.+. .+++.    ...+.++.+|++|.+++.+++++ 
T Consensus         8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~-~~~l~----~~~v~~~~~Dl~d~~~l~~~~~~-   81 (346)
T 3i6i_A            8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKI-FKALE----DKGAIIVYGLINEQEAMEKILKE-   81 (346)
T ss_dssp             ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHH-HHHHH----HTTCEEEECCTTCHHHHHHHHHH-
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHH-HHHHH----hCCcEEEEeecCCHHHHHHHHhh-
Confidence            4467899999999999999999999999999999987    33321 22232    24688999999999988887653 


Q ss_pred             HHHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017812          133 QQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       133 ~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~  212 (365)
                                .++|+|||+||..                 |+.++..+++++...-    ...++|+ |+. +.     .
T Consensus        82 ----------~~~d~Vi~~a~~~-----------------n~~~~~~l~~aa~~~g----~v~~~v~-S~~-g~-----~  123 (346)
T 3i6i_A           82 ----------HEIDIVVSTVGGE-----------------SILDQIALVKAMKAVG----TIKRFLP-SEF-GH-----D  123 (346)
T ss_dssp             ----------TTCCEEEECCCGG-----------------GGGGHHHHHHHHHHHC----CCSEEEC-SCC-SS-----C
T ss_pred             ----------CCCCEEEECCchh-----------------hHHHHHHHHHHHHHcC----CceEEee-ccc-CC-----C
Confidence                      2599999999972                 7778878877775431    1246764 432 21     0


Q ss_pred             CCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHH-H--HH
Q 017812          213 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLM-A--FT  289 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~-~--~~  289 (365)
                      .+          +..+.++...|+.+|.+.+.+.+.          .|+.++.++||++............... .  ..
T Consensus       124 ~~----------e~~~~~p~~~y~~sK~~~e~~l~~----------~g~~~tivrpg~~~g~~~~~~~~~~~~~~~~~~~  183 (346)
T 3i6i_A          124 VN----------RADPVEPGLNMYREKRRVRQLVEE----------SGIPFTYICCNSIASWPYYNNIHPSEVLPPTDFF  183 (346)
T ss_dssp             TT----------TCCCCTTHHHHHHHHHHHHHHHHH----------TTCCBEEEECCEESSCCCSCC-----CCCCSSCE
T ss_pred             CC----------ccCcCCCcchHHHHHHHHHHHHHH----------cCCCEEEEEecccccccCccccccccccCCCceE
Confidence            01          113445678899999998776643          3688999999988775543321100000 0  00


Q ss_pred             ----HHHHhcCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017812          290 ----VLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  330 (365)
Q Consensus       290 ----~~~~~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~  330 (365)
                          .......+..++|+|+.+++++..++..++.++....|+.+
T Consensus       184 ~~~g~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~g~~~~~  228 (346)
T 3i6i_A          184 QIYGDGNVKAYFVAGTDIGKFTMKTVDDVRTLNKSVHFRPSCNCL  228 (346)
T ss_dssp             EEETTSCCCEEEECHHHHHHHHHHHTTCGGGTTEEEECCCGGGEE
T ss_pred             EEccCCCceEEecCHHHHHHHHHHHHhCccccCeEEEEeCCCCCC
Confidence                00001134689999999997665543333444443234554

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.68  E-value=1e-15  Score=144.12  Aligned_cols=191  Identities=14%  Similarity=0.040  Sum_probs=137.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhcc
Q 017812           61 VCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  139 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~  139 (365)
                      +|+||||+|+||++++++|+++|+ +|+.++|+                           +|.++++++++         
T Consensus         2 ~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~---------------------------~d~~~l~~~~~---------   45 (369)
T 3st7_A            2 NIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ---------------------------TKEEELESALL---------   45 (369)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT---------------------------CCHHHHHHHHH---------
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC---------------------------CCHHHHHHHhc---------
Confidence            599999999999999999999998 88777764                           56667766654         


Q ss_pred             CCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcccc
Q 017812          140 DMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETIT  219 (365)
Q Consensus       140 ~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~~~  219 (365)
                          ++|++||+||...+      +..+..+++|+.++..+++++..    .+...++|++||...+             
T Consensus        46 ----~~d~Vih~a~~~~~------~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~~v~~Ss~~~~-------------   98 (369)
T 3st7_A           46 ----KADFIVHLAGVNRP------EHDKEFSLGNVSYLDHVLDILTR----NTKKPAILLSSSIQAT-------------   98 (369)
T ss_dssp             ----HCSEEEECCCSBCT------TCSTTCSSSCCBHHHHHHHHHTT----CSSCCEEEEEEEGGGG-------------
T ss_pred             ----cCCEEEECCcCCCC------CCHHHHHHHHHHHHHHHHHHHHH----hCCCCeEEEeCchhhc-------------
Confidence                28999999998643      24466788999999999988743    2212499999998876             


Q ss_pred             ccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc-hhHHHHHHHHHHH--Hh--
Q 017812          220 GKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV-PSFLSLMAFTVLK--LL--  294 (365)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~-~~~~~~~~~~~~~--~~--  294 (365)
                             .    ...|+.||++.+.+.+.++++.      |++++.++|+.+..+..+.. .............  +.  
T Consensus        99 -------~----~~~Y~~sK~~~E~~~~~~~~~~------g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (369)
T 3st7_A           99 -------Q----DNPYGESKLQGEQLLREYAEEY------GNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQV  161 (369)
T ss_dssp             -------S----CSHHHHHHHHHHHHHHHHHHHH------CCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCC
T ss_pred             -------C----CCCchHHHHHHHHHHHHHHHHh------CCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEe
Confidence                   1    4679999999999999998764      67899999999987654321 1111111110000  00  


Q ss_pred             ------cCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcccc
Q 017812          295 ------GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  331 (365)
Q Consensus       295 ------~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~~  331 (365)
                            ..+..++|+|++++.++..+....|..|...+++++.
T Consensus       162 ~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~~i~~~~~~s  204 (369)
T 3st7_A          162 NDRNVELTLNYVDDIVAEIKRAIEGTPTIENGVPTVPNVFKVT  204 (369)
T ss_dssp             SCTTCEEEEEEHHHHHHHHHHHHHTCCCEETTEECCSCCEEEE
T ss_pred             cCCCeEEEEEEHHHHHHHHHHHHhCCcccCCceEEeCCCCcee
Confidence                  0234689999999977665544337788777776653

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.68  E-value=8.6e-17  Score=145.97  Aligned_cols=206  Identities=7%  Similarity=-0.062  Sum_probs=135.0

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhcc
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  139 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~  139 (365)
                      ++|+|||| |+||.+++++|+++|++|++++|+.++.+....        ..+.++.+|++|.+        +       
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--------~~~~~~~~D~~d~~--------~-------   61 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA--------SGAEPLLWPGEEPS--------L-------   61 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH--------TTEEEEESSSSCCC--------C-------
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh--------CCCeEEEecccccc--------c-------
Confidence            68999998 999999999999999999999999887654332        35889999999943        1       


Q ss_pred             CCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcC-CCCCeEEEEcCCcccccccccCCCccc
Q 017812          140 DMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNS-PVPSRIVNVTSFTHRNVFNAQVNNETI  218 (365)
Q Consensus       140 ~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~-~~~g~iV~vsS~~~~~~~~~~~~~~~~  218 (365)
                         .++|++||+||.....     +.              .++.++..+.+. ....++|++||.+.+.....       
T Consensus        62 ---~~~d~vi~~a~~~~~~-----~~--------------~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~-------  112 (286)
T 3ius_A           62 ---DGVTHLLISTAPDSGG-----DP--------------VLAALGDQIAARAAQFRWVGYLSTTAVYGDHDG-------  112 (286)
T ss_dssp             ---TTCCEEEECCCCBTTB-----CH--------------HHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTT-------
T ss_pred             ---CCCCEEEECCCccccc-----cH--------------HHHHHHHHHHhhcCCceEEEEeecceecCCCCC-------
Confidence               3589999999975331     00              013333434331 12479999999876532211       


Q ss_pred             cccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHH--HHHHHHhcC
Q 017812          219 TGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMA--FTVLKLLGL  296 (365)
Q Consensus       219 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~--~~~~~~~~~  296 (365)
                        ..+.+..+..+...|+.+|.+.+.+.+.+         .|++++.++||.+..+....+........  ...-.....
T Consensus       113 --~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~---------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  181 (286)
T 3ius_A          113 --AWVDETTPLTPTAARGRWRVMAEQQWQAV---------PNLPLHVFRLAGIYGPGRGPFSKLGKGGIRRIIKPGQVFS  181 (286)
T ss_dssp             --CEECTTSCCCCCSHHHHHHHHHHHHHHHS---------TTCCEEEEEECEEEBTTBSSSTTSSSSCCCEEECTTCCBC
T ss_pred             --CCcCCCCCCCCCCHHHHHHHHHHHHHHhh---------cCCCEEEEeccceECCCchHHHHHhcCCccccCCCCcccc
Confidence              11122245556678999999998887655         37899999999997664322111000000  000000113


Q ss_pred             CCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcccc
Q 017812          297 LQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  331 (365)
Q Consensus       297 ~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~~  331 (365)
                      +..++|+|++++.++..+.  .|..|...+|+++.
T Consensus       182 ~i~v~Dva~a~~~~~~~~~--~g~~~~i~~~~~~s  214 (286)
T 3ius_A          182 RIHVEDIAQVLAASMARPD--PGAVYNVCDDEPVP  214 (286)
T ss_dssp             EEEHHHHHHHHHHHHHSCC--TTCEEEECCSCCBC
T ss_pred             eEEHHHHHHHHHHHHhCCC--CCCEEEEeCCCCcc
Confidence            4578999999997665544  56677777777663

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.67  E-value=1.6e-16  Score=145.56  Aligned_cols=198  Identities=13%  Similarity=0.106  Sum_probs=123.4

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCc-------hhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHH
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS-------HLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDS  131 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~-------~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~  131 (365)
                      +++|+||||||+||++++++|+++|++|++++|+.       ++.+.+ +++..    ..+.++++|++|.+++.++++ 
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~-~~l~~----~~v~~v~~D~~d~~~l~~~~~-   75 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELI-DNYQS----LGVILLEGDINDHETLVKAIK-   75 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHH-HHHHH----TTCEEEECCTTCHHHHHHHHT-
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHH-HHHHh----CCCEEEEeCCCCHHHHHHHHh-
Confidence            46799999999999999999999999999999987       444332 33322    257889999999988766543 


Q ss_pred             HHHHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017812          132 LQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  211 (365)
Q Consensus       132 ~~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~  211 (365)
                                  ++|+|||+||...                 +.++..+++++    ++.+..+|+|  .|..+..    
T Consensus        76 ------------~~d~vi~~a~~~~-----------------~~~~~~l~~aa----~~~g~v~~~v--~S~~g~~----  116 (307)
T 2gas_A           76 ------------QVDIVICAAGRLL-----------------IEDQVKIIKAI----KEAGNVKKFF--PSEFGLD----  116 (307)
T ss_dssp             ------------TCSEEEECSSSSC-----------------GGGHHHHHHHH----HHHCCCSEEE--CSCCSSC----
T ss_pred             ------------CCCEEEECCcccc-----------------cccHHHHHHHH----HhcCCceEEe--ecccccC----
Confidence                        4999999999742                 22334444444    3322135776  3433320    


Q ss_pred             cCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHH----H--H
Q 017812          212 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFL----S--L  285 (365)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~----~--~  285 (365)
                       .+.   .      ....|....| .+|++++.+.+.          .|++++.++||++.+++...+....    .  .
T Consensus       117 -~~~---~------~~~~p~~~~y-~sK~~~e~~~~~----------~~i~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~  175 (307)
T 2gas_A          117 -VDR---H------DAVEPVRQVF-EEKASIRRVIEA----------EGVPYTYLCCHAFTGYFLRNLAQLDATDPPRDK  175 (307)
T ss_dssp             -TTS---C------CCCTTHHHHH-HHHHHHHHHHHH----------HTCCBEEEECCEETTTTGGGTTCTTCSSCCSSE
T ss_pred             -ccc---c------cCCCcchhHH-HHHHHHHHHHHH----------cCCCeEEEEcceeeccccccccccccccCCCCe
Confidence             000   0      0233456789 999998876642          3678899999999886543221100    0  0


Q ss_pred             HH-HHHHHHhcCCCCHHHHHHHHHHHhcCCCCCcccEEe
Q 017812          286 MA-FTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFF  323 (365)
Q Consensus       286 ~~-~~~~~~~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~  323 (365)
                      .. .........+.+++|+|+.++.++..+. ..|..+.
T Consensus       176 ~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~-~~~~~~~  213 (307)
T 2gas_A          176 VVILGDGNVKGAYVTEADVGTFTIRAANDPN-TLNKAVH  213 (307)
T ss_dssp             EEEETTSCSEEEEECHHHHHHHHHHHHTCGG-GTTEEEE
T ss_pred             EEEecCCCcceEEeeHHHHHHHHHHHHcCcc-ccCceEE
Confidence            00 0000001134689999999997665433 3344443

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.66  E-value=4.5e-16  Score=153.10  Aligned_cols=218  Identities=11%  Similarity=0.027  Sum_probs=140.2

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhc
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  138 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~  138 (365)
                      +++||||||+|+||.+++++|+++|++|++++|+..+.                ..+.+|+.+..         .+    
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~----------------~~v~~d~~~~~---------~~----  197 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP----------------GKRFWDPLNPA---------SD----  197 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT----------------TCEECCTTSCC---------TT----
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc----------------cceeecccchh---------HH----
Confidence            57899999999999999999999999999999987642                12667876532         11    


Q ss_pred             cCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCccc
Q 017812          139 SDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETI  218 (365)
Q Consensus       139 ~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~~  218 (365)
                        ...++|+|||+||..... ..+.+..+..+++|+.++..+++++..   +.+ .+++|++||.+.+.....       
T Consensus       198 --~l~~~D~Vih~A~~~~~~-~~~~~~~~~~~~~Nv~gt~~ll~a~a~---~~~-~~r~V~~SS~~vyg~~~~-------  263 (516)
T 3oh8_A          198 --LLDGADVLVHLAGEPIFG-RFNDSHKEAIRESRVLPTKFLAELVAE---STQ-CTTMISASAVGFYGHDRG-------  263 (516)
T ss_dssp             --TTTTCSEEEECCCC------CCGGGHHHHHHHTHHHHHHHHHHHHH---CSS-CCEEEEEEEGGGGCSEEE-------
T ss_pred             --hcCCCCEEEECCCCcccc-ccchhHHHHHHHHHHHHHHHHHHHHHh---cCC-CCEEEEeCcceEecCCCC-------
Confidence              235699999999985332 445677888999999999999997432   222 579999999876631100       


Q ss_pred             cccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHh----
Q 017812          219 TGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLL----  294 (365)
Q Consensus       219 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~----  294 (365)
                       ...+.+..+. +...|+.+|...+.+.+...       ..|++++.++||.+.++.....+..............    
T Consensus       264 -~~~~~E~~~~-~~~~y~~~~~~~E~~~~~~~-------~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~g~~~~~g~g~  334 (516)
T 3oh8_A          264 -DEILTEESES-GDDFLAEVCRDWEHATAPAS-------DAGKRVAFIRTGVALSGRGGMLPLLKTLFSTGLGGKFGDGT  334 (516)
T ss_dssp             -EEEECTTSCC-CSSHHHHHHHHHHHTTHHHH-------HTTCEEEEEEECEEEBTTBSHHHHHHHTTC---CCCCTTSC
T ss_pred             -CCccCCCCCC-CcChHHHHHHHHHHHHHHHH-------hCCCCEEEEEeeEEECCCCChHHHHHHHHHhCCCcccCCCC
Confidence             0011111222 45678888988776654332       4689999999999988753211111000000000000    


Q ss_pred             --cCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017812          295 --GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  330 (365)
Q Consensus       295 --~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~  330 (365)
                        ..+..++|+|++++.++..+. .+|.|.. .+++++
T Consensus       335 ~~~~~i~v~Dva~ai~~~l~~~~-~~g~~ni-~~~~~~  370 (516)
T 3oh8_A          335 SWFSWIAIDDLTDIYYRAIVDAQ-ISGPINA-VAPNPV  370 (516)
T ss_dssp             CEECEEEHHHHHHHHHHHHHCTT-CCEEEEE-SCSCCE
T ss_pred             ceEceEeHHHHHHHHHHHHhCcc-cCCcEEE-ECCCCC
Confidence              123578999999997665443 4565544 445555

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.60  E-value=1.8e-15  Score=138.93  Aligned_cols=211  Identities=8%  Similarity=0.049  Sum_probs=125.7

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCch-----hHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHH
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH-----LLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  133 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~-----~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~  133 (365)
                      .++|+||||||+||++++++|+++|++|++++|+..     +.+. .+++.    ...+.++.+|++|++++.++++   
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-~~~~~----~~~~~~~~~D~~d~~~l~~~~~---   75 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQM-LLYFK----QLGAKLIEASLDDHQRLVDALK---   75 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHH-HHHHH----TTTCEEECCCSSCHHHHHHHHT---
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHH-HHHHH----hCCeEEEeCCCCCHHHHHHHHh---
Confidence            367999999999999999999999999999999853     3222 22222    2357899999999988776543   


Q ss_pred             HHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          134 QWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       134 ~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                                ++|++||+||.....             .|+.++..+++++.    +.+..+|+|+  |..+...     
T Consensus        76 ----------~~d~vi~~a~~~~~~-------------~~~~~~~~l~~aa~----~~g~v~~~v~--S~~g~~~-----  121 (313)
T 1qyd_A           76 ----------QVDVVISALAGGVLS-------------HHILEQLKLVEAIK----EAGNIKRFLP--SEFGMDP-----  121 (313)
T ss_dssp             ----------TCSEEEECCCCSSSS-------------TTTTTHHHHHHHHH----HSCCCSEEEC--SCCSSCT-----
T ss_pred             ----------CCCEEEECCccccch-------------hhHHHHHHHHHHHH----hcCCCceEEe--cCCcCCc-----
Confidence                      489999999975321             25556666655553    3221358874  3332100     


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH-------HHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF-------LSLM  286 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~-------~~~~  286 (365)
                        +...      ....+....| .+|++++.+.+          ..|+.++.++||++.+++...+...       ....
T Consensus       122 --~~~~------~~~~p~~~~y-~sK~~~e~~~~----------~~g~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~  182 (313)
T 1qyd_A          122 --DIME------HALQPGSITF-IDKRKVRRAIE----------AASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKV  182 (313)
T ss_dssp             --TSCC------CCCSSTTHHH-HHHHHHHHHHH----------HTTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEE
T ss_pred             --cccc------cCCCCCcchH-HHHHHHHHHHH----------hcCCCeEEEEeceeccccccccccccccccCCCCeE
Confidence              0000      0112345678 99999887663          2367888899998855332211000       0000


Q ss_pred             HHH-HHHHhcCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017812          287 AFT-VLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  330 (365)
Q Consensus       287 ~~~-~~~~~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~  330 (365)
                      ... .......+.+++|+|+.++.++..+...++.++....++.+
T Consensus       183 ~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~  227 (313)
T 1qyd_A          183 LIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNIL  227 (313)
T ss_dssp             CCBTTSCSEEEEECHHHHHHHHHHHTTCGGGSSSEEECCCGGGEE
T ss_pred             EEeCCCCceEEEEEHHHHHHHHHHHHhCcccCCceEEEeCCCCcc
Confidence            000 00001134689999999997655433223334443333443

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.60  E-value=7.2e-16  Score=142.26  Aligned_cols=206  Identities=8%  Similarity=0.020  Sum_probs=121.9

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCc-h----hHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHH
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS-H----LLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  133 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~-~----~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~  133 (365)
                      .++++||||||+||.+++++|+++|++|++++|+. .    ...+..+++..    ..+.++.+|++|.+++.++++   
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~----~~v~~v~~D~~d~~~l~~a~~---   76 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRS----MGVTIIEGEMEEHEKMVSVLK---   76 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHH----TTCEEEECCTTCHHHHHHHHT---
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhc----CCcEEEEecCCCHHHHHHHHc---
Confidence            35799999999999999999999999999999986 2    12222222322    357899999999988776653   


Q ss_pred             HHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          134 QWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       134 ~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                                .+|+|||+||...                 +.++..+++++    .+.+..++||  .|..+...     
T Consensus        77 ----------~~d~vi~~a~~~~-----------------~~~~~~l~~aa----~~~g~v~~~v--~S~~g~~~-----  118 (321)
T 3c1o_A           77 ----------QVDIVISALPFPM-----------------ISSQIHIINAI----KAAGNIKRFL--PSDFGCEE-----  118 (321)
T ss_dssp             ----------TCSEEEECCCGGG-----------------SGGGHHHHHHH----HHHCCCCEEE--CSCCSSCG-----
T ss_pred             ----------CCCEEEECCCccc-----------------hhhHHHHHHHH----HHhCCccEEe--ccccccCc-----
Confidence                      3899999999642                 22333344433    3322135777  34333200     


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccch-------hHHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP-------SFLSLM  286 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~-------~~~~~~  286 (365)
                        +. .      ....+....| .+|++++.+.+.          .|+.++.++||++.++....+.       ......
T Consensus       119 --~~-~------~~~~p~~~~y-~sK~~~e~~~~~----------~~~~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~  178 (321)
T 3c1o_A          119 --DR-I------KPLPPFESVL-EKKRIIRRAIEA----------AALPYTYVSANCFGAYFVNYLLHPSPHPNRNDDIV  178 (321)
T ss_dssp             --GG-C------CCCHHHHHHH-HHHHHHHHHHHH----------HTCCBEEEECCEEHHHHHHHHHCCCSSCCTTSCEE
T ss_pred             --cc-c------ccCCCcchHH-HHHHHHHHHHHH----------cCCCeEEEEeceeccccccccccccccccccCceE
Confidence              00 0      0122336789 999999877742          2567788899987554221000       000000


Q ss_pred             HHHHHHHhcCCCCHHHHHHHHHHHhcCCCCCcccEEeCC-CCccc
Q 017812          287 AFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGG-KGRTV  330 (365)
Q Consensus       287 ~~~~~~~~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~-~g~~~  330 (365)
                      ..........+.+++|+|+.++.++..+. ..|..+... .|+.+
T Consensus       179 ~~~~~~~~~~~i~~~Dva~~~~~~l~~~~-~~g~~~~~~g~~~~~  222 (321)
T 3c1o_A          179 IYGTGETKFVLNYEEDIAKYTIKVACDPR-CCNRIVIYRPPKNII  222 (321)
T ss_dssp             EETTSCCEEEEECHHHHHHHHHHHHHCGG-GTTEEEECCCGGGEE
T ss_pred             EecCCCcceeEeeHHHHHHHHHHHHhCcc-ccCeEEEEeCCCCcc
Confidence            00000001134689999999997665543 335544433 24443

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.59  E-value=1.7e-14  Score=134.92  Aligned_cols=203  Identities=14%  Similarity=-0.008  Sum_probs=128.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEec-CCChhhHHHHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVD-LSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D-ls~~~~v~~~~~~~~~~~  136 (365)
                      .+++++||||||+||++++++|+++|++|++++|+.++..  .+.+..   ...+.++.+| ++|.+++.++++      
T Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~--~~~l~~---~~~v~~v~~D~l~d~~~l~~~~~------   72 (352)
T 1xgk_A            4 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI--AEELQA---IPNVTLFQGPLLNNVPLMDTLFE------   72 (352)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH--HHHHHT---STTEEEEESCCTTCHHHHHHHHT------
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhh--HHHHhh---cCCcEEEECCccCCHHHHHHHHh------
Confidence            3678999999999999999999999999999999987642  123322   2367889999 999988876542      


Q ss_pred             hccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017812          137 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  216 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~  216 (365)
                             .+|++|||++...             .+.|..+ ..+++++    ++.+..++||++||.....         
T Consensus        73 -------~~d~Vi~~a~~~~-------------~~~~~~~-~~l~~aa----~~~g~v~~~V~~SS~~~~~---------  118 (352)
T 1xgk_A           73 -------GAHLAFINTTSQA-------------GDEIAIG-KDLADAA----KRAGTIQHYIYSSMPDHSL---------  118 (352)
T ss_dssp             -------TCSEEEECCCSTT-------------SCHHHHH-HHHHHHH----HHHSCCSEEEEEECCCGGG---------
T ss_pred             -------cCCEEEEcCCCCC-------------cHHHHHH-HHHHHHH----HHcCCccEEEEeCCccccc---------
Confidence                   3899999997531             1235544 4444444    3321136999999986210         


Q ss_pred             cccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh----H--HHHHH-H-
Q 017812          217 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS----F--LSLMA-F-  288 (365)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~----~--~~~~~-~-  288 (365)
                                .+.+....|+.||++.+.+++.          .|++++.++||++-++.......    .  ..... . 
T Consensus       119 ----------~~~~~~~~y~~sK~~~E~~~~~----------~gi~~~ivrpg~~g~~~~~~~~~~~~~~~~~~g~~~~~  178 (352)
T 1xgk_A          119 ----------YGPWPAVPMWAPKFTVENYVRQ----------LGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWH  178 (352)
T ss_dssp             ----------TSSCCCCTTTHHHHHHHHHHHT----------SSSCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEE
T ss_pred             ----------cCCCCCccHHHHHHHHHHHHHH----------cCCCEEEEecceecCCchhcccccccccccCCCceEEe
Confidence                      1122335799999999887743          37889999999875543221000    0  00000 0 


Q ss_pred             HH--HHHhcCCCCH-HHHHHHHHHHhcCCC-CCcccEEeCC
Q 017812          289 TV--LKLLGLLQSP-EKGINSVLDAALAPP-ETSGVYFFGG  325 (365)
Q Consensus       289 ~~--~~~~~~~~~p-~e~A~~i~~~~l~~~-~~~G~~~~~~  325 (365)
                      ..  ......+.++ +|+|++++.++..++ ...|+.|...
T Consensus       179 ~~~~~~~~~~~i~v~~Dva~ai~~~l~~~~~~~~g~~~~l~  219 (352)
T 1xgk_A          179 APFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALT  219 (352)
T ss_dssp             ESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTTCEEEEC
T ss_pred             eccCCCCceeeEecHHHHHHHHHHHHhCCchhhCCeEEEEe
Confidence            00  0000023577 899999997665432 2245555544

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.57  E-value=2.4e-15  Score=137.86  Aligned_cols=202  Identities=15%  Similarity=0.132  Sum_probs=117.6

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhH--HHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLL--SETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~--~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      .++|+||||||+||++++++|+++|++|++++|+....  .+..+.+.... ...+.++++|++|.+++.++++      
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~-~~~v~~v~~D~~d~~~l~~~~~------   76 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK-ASGANIVHGSIDDHASLVEAVK------   76 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHH-TTTCEEECCCTTCHHHHHHHHH------
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHH-hCCCEEEEeccCCHHHHHHHHc------
Confidence            46799999999999999999999999999999985321  11111121111 2357889999999988776653      


Q ss_pred             hccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017812          137 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  216 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~  216 (365)
                             ++|++||+||...                 +.++..+++++    ++.+..+|+|+ |+.+..      .+. 
T Consensus        77 -------~~d~vi~~a~~~~-----------------~~~~~~l~~aa----~~~g~v~~~v~-S~~g~~------~~~-  120 (308)
T 1qyc_A           77 -------NVDVVISTVGSLQ-----------------IESQVNIIKAI----KEVGTVKRFFP-SEFGND------VDN-  120 (308)
T ss_dssp             -------TCSEEEECCCGGG-----------------SGGGHHHHHHH----HHHCCCSEEEC-SCCSSC------TTS-
T ss_pred             -------CCCEEEECCcchh-----------------hhhHHHHHHHH----HhcCCCceEee-cccccC------ccc-
Confidence                   3899999999632                 22333344443    33221357763 432211      000 


Q ss_pred             cccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHH------HHHH-HH
Q 017812          217 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFL------SLMA-FT  289 (365)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~------~~~~-~~  289 (365)
                        .      ....+....| .+|++++.+.+.          .|+.++.++||++.+++........      .... ..
T Consensus       121 --~------~~~~p~~~~y-~sK~~~e~~~~~----------~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (308)
T 1qyc_A          121 --V------HAVEPAKSVF-EVKAKVRRAIEA----------EGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILG  181 (308)
T ss_dssp             --C------CCCTTHHHHH-HHHHHHHHHHHH----------HTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEET
T ss_pred             --c------ccCCcchhHH-HHHHHHHHHHHh----------cCCCeEEEEeceeccccccccccccccCCCCCceEEec
Confidence              0      0223446789 999998877643          2567888899987553322110000      0000 00


Q ss_pred             HHHHhcCCCCHHHHHHHHHHHhcCCCCCcccEEe
Q 017812          290 VLKLLGLLQSPEKGINSVLDAALAPPETSGVYFF  323 (365)
Q Consensus       290 ~~~~~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~  323 (365)
                      .......+.+++|+|+.++.++.. +...|..+.
T Consensus       182 ~~~~~~~~i~~~Dva~~~~~~l~~-~~~~~~~~~  214 (308)
T 1qyc_A          182 DGNARVVFVKEEDIGTFTIKAVDD-PRTLNKTLY  214 (308)
T ss_dssp             TSCCEEEEECHHHHHHHHHTTSSC-GGGTTEEEE
T ss_pred             CCCceEEEecHHHHHHHHHHHHhC-ccccCeEEE
Confidence            000011245889999999964433 333344443

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.56  E-value=1.2e-15  Score=140.68  Aligned_cols=206  Identities=8%  Similarity=0.065  Sum_probs=120.2

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhcc
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  139 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~  139 (365)
                      ++++||||||+||.+++++|+++|++|++++|+.+...+..+++..    ..+.++++|++|.+++.++++         
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~----~~v~~v~~Dl~d~~~l~~a~~---------   78 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQS----LGAIIVKGELDEHEKLVELMK---------   78 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHH----TTCEEEECCTTCHHHHHHHHT---------
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhc----CCCEEEEecCCCHHHHHHHHc---------
Confidence            5799999999999999999999999999999987522222233322    257889999999988776653         


Q ss_pred             CCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcccc
Q 017812          140 DMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETIT  219 (365)
Q Consensus       140 ~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~~~  219 (365)
                          .+|+|||+||...                 +.++..+++    .+++.+..+++|+ |+ .+..     .+..   
T Consensus        79 ----~~d~vi~~a~~~~-----------------~~~~~~l~~----aa~~~g~v~~~v~-S~-~g~~-----~~~~---  123 (318)
T 2r6j_A           79 ----KVDVVISALAFPQ-----------------ILDQFKILE----AIKVAGNIKRFLP-SD-FGVE-----EDRI---  123 (318)
T ss_dssp             ----TCSEEEECCCGGG-----------------STTHHHHHH----HHHHHCCCCEEEC-SC-CSSC-----TTTC---
T ss_pred             ----CCCEEEECCchhh-----------------hHHHHHHHH----HHHhcCCCCEEEe-ec-cccC-----cccc---
Confidence                3899999999632                 222333333    3333221357763 33 2210     0000   


Q ss_pred             ccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH----HHHHHHHHHHHhc
Q 017812          220 GKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF----LSLMAFTVLKLLG  295 (365)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~----~~~~~~~~~~~~~  295 (365)
                            ....+....| .+|++++.+.+.          .|+.++.++||++..++...+...    .............
T Consensus       124 ------~~~~p~~~~y-~sK~~~e~~~~~----------~~~~~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (318)
T 2r6j_A          124 ------NALPPFEALI-ERKRMIRRAIEE----------ANIPYTYVSANCFASYFINYLLRPYDPKDEITVYGTGEAKF  186 (318)
T ss_dssp             ------CCCHHHHHHH-HHHHHHHHHHHH----------TTCCBEEEECCEEHHHHHHHHHCTTCCCSEEEEETTSCCEE
T ss_pred             ------cCCCCcchhH-HHHHHHHHHHHh----------cCCCeEEEEcceehhhhhhhhccccCCCCceEEecCCCcee
Confidence                  0122335678 999998876642          367788899998754321100000    0000000000011


Q ss_pred             CCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017812          296 LLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  330 (365)
Q Consensus       296 ~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~  330 (365)
                      .+.+++|+|+.++.++..++..++.++....|+.+
T Consensus       187 ~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~  221 (318)
T 2r6j_A          187 AMNYEQDIGLYTIKVATDPRALNRVVIYRPSTNII  221 (318)
T ss_dssp             EEECHHHHHHHHHHHTTCGGGTTEEEECCCGGGEE
T ss_pred             eEeeHHHHHHHHHHHhcCccccCeEEEecCCCCcc
Confidence            24589999999997655433223334443334433

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.50  E-value=4.7e-13  Score=122.04  Aligned_cols=215  Identities=16%  Similarity=0.069  Sum_probs=130.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhccC
Q 017812           61 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  140 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~~  140 (365)
                      .||||||||.||++++++|.++|++|++++|++..              ..   +..|     .+   .   .+      
T Consensus         2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~--------------~~---~~~~-----~~---~---~~------   47 (298)
T 4b4o_A            2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGP--------------GR---ITWD-----EL---A---AS------   47 (298)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT--------------TE---EEHH-----HH---H---HH------
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc--------------Ce---eecc-----hh---h---Hh------
Confidence            49999999999999999999999999999997642              11   1111     11   0   11      


Q ss_pred             CCCCeeEEEecCCcc--cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCccc
Q 017812          141 MHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETI  218 (365)
Q Consensus       141 ~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~~  218 (365)
                      ....+|.+||.||..  .+....+....+..+++|+.++-.+.+++...-.+   ..++|+.||.+.+.......     
T Consensus        48 ~l~~~d~vihla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~---~~~~i~~Ss~~vyg~~~~~~-----  119 (298)
T 4b4o_A           48 GLPSCDAAVNLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQP---PKAWVLVTGVAYYQPSLTAE-----  119 (298)
T ss_dssp             CCCSCSEEEECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSC---CSEEEEEEEGGGSCCCSSCC-----
T ss_pred             hccCCCEEEEeccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCC---ceEEEEEeeeeeecCCCCCc-----
Confidence            345799999999853  33344567777888999999998887766443221   34678888877663322111     


Q ss_pred             cccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhc---
Q 017812          219 TGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLG---  295 (365)
Q Consensus       219 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~---  295 (365)
                          ..+..+..+...|+.+|...+..     ....   ..++++..+.||.|-.+-.................+.+   
T Consensus       120 ----~~E~~p~~~~~~~~~~~~~~e~~-----~~~~---~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~g~g~  187 (298)
T 4b4o_A          120 ----YDEDSPGGDFDFFSNLVTKWEAA-----ARLP---GDSTRQVVVRSGVVLGRGGGAMGHMLLPFRLGLGGPIGSGH  187 (298)
T ss_dssp             ----BCTTCCCSCSSHHHHHHHHHHHH-----HCCS---SSSSEEEEEEECEEECTTSHHHHHHHHHHHTTCCCCBTTSC
T ss_pred             ----ccccCCccccchhHHHHHHHHHH-----HHhh---ccCCceeeeeeeeEEcCCCCchhHHHHHHhcCCcceecccC
Confidence                11123444455566666544321     1222   67999999999999877432111111000000000000   


Q ss_pred             ---CCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcccc
Q 017812          296 ---LLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  331 (365)
Q Consensus       296 ---~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~~  331 (365)
                         -+...+|+|++++.++. .+..+|. |+..+++++.
T Consensus       188 ~~~~~ihv~Dva~a~~~~~~-~~~~~g~-yn~~~~~~~t  224 (298)
T 4b4o_A          188 QFFPWIHIGDLAGILTHALE-ANHVHGV-LNGVAPSSAT  224 (298)
T ss_dssp             SBCCEEEHHHHHHHHHHHHH-CTTCCEE-EEESCSCCCB
T ss_pred             ceeecCcHHHHHHHHHHHHh-CCCCCCe-EEEECCCccC
Confidence               12468999999986544 4445664 4556666663

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.38  E-value=1.2e-13  Score=125.43  Aligned_cols=107  Identities=16%  Similarity=0.168  Sum_probs=84.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      +++||+++||||+||||+++++.|+++|++|++++|+.++++++.+++....   .+.++.+|+++.++++++++     
T Consensus       116 ~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~---~~~~~~~D~~~~~~~~~~~~-----  187 (287)
T 1lu9_A          116 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF---KVNVTAAETADDASRAEAVK-----  187 (287)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH---TCCCEEEECCSHHHHHHHTT-----
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEecCCCHHHHHHHHH-----
Confidence            4679999999999999999999999999999999999999888888876532   35678899999987765432     


Q ss_pred             HhccCCCCCeeEEEecCCccc-CC--CCCCH-HHHhHhHHHHhHHHH
Q 017812          136 LLDSDMHSSIQLLINNAGILA-TS--SRLTP-EGYDQMMSTNYIGAF  178 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~-~~--~~~~~-~~~~~~~~vN~~~~~  178 (365)
                              .+|+||||||+.. +.  .+.+. +.++.++++|+.+++
T Consensus       188 --------~~DvlVn~ag~g~~~~~~~~~~~~~~~~~~~dvn~~~~~  226 (287)
T 1lu9_A          188 --------GAHFVFTAGAIGLELLPQAAWQNESSIEIVADYNAQPPL  226 (287)
T ss_dssp             --------TCSEEEECCCTTCCSBCHHHHTTCTTCCEEEECCCSSSC
T ss_pred             --------hCCEEEECCCccccCCChhHcCchHHHHHHHHhhhhhhH
Confidence                    3899999998642 21  12222 555668888888877

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.15  E-value=1.2e-10  Score=107.71  Aligned_cols=159  Identities=10%  Similarity=0.065  Sum_probs=105.9

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCC-------EEEEEecCc--hhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHH
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGF-------HVVLVGRSS--HLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKD  130 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~-------~Vil~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~  130 (365)
                      ..|+||||+|.||.+++..|+++|.       +|++++++.  ++.+....++...  .  +.++ .|+.+.++..+.+ 
T Consensus         5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~--~--~~~~-~di~~~~~~~~a~-   78 (327)
T 1y7t_A            5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDC--A--FPLL-AGLEATDDPKVAF-   78 (327)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTT--T--CTTE-EEEEEESCHHHHT-
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhcc--c--cccc-CCeEeccChHHHh-
Confidence            4699999999999999999999996       899999875  3333333344321  1  1122 5776655544332 


Q ss_pred             HHHHHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc
Q 017812          131 SLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN  210 (365)
Q Consensus       131 ~~~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~  210 (365)
                                  ...|++||.||..... ..+   -++.+++|+.++..+++++..+-  .. .++++++|+......+ 
T Consensus        79 ------------~~~D~Vih~Ag~~~~~-~~~---~~~~~~~Nv~~t~~l~~a~~~~~--~~-~~~vvv~snp~~~~~~-  138 (327)
T 1y7t_A           79 ------------KDADYALLVGAAPRKA-GME---RRDLLQVNGKIFTEQGRALAEVA--KK-DVKVLVVGNPANTNAL-  138 (327)
T ss_dssp             ------------TTCSEEEECCCCCCCT-TCC---HHHHHHHHHHHHHHHHHHHHHHS--CT-TCEEEECSSSHHHHHH-
T ss_pred             ------------CCCCEEEECCCcCCCC-CCC---HHHHHHHHHHHHHHHHHHHHhhc--CC-CeEEEEeCCchhhhHH-
Confidence                        3489999999986432 222   35679999999999999887652  11 3688888876521000 


Q ss_pred             ccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhC
Q 017812          211 AQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLG  254 (365)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~  254 (365)
                        .     ..+   ...+.++...|+.||...+.+...+++.+.
T Consensus       139 --~-----~~~---~~~~~~p~~~yg~tkl~~er~~~~~a~~~g  172 (327)
T 1y7t_A          139 --I-----AYK---NAPGLNPRNFTAMTRLDHNRAKAQLAKKTG  172 (327)
T ss_dssp             --H-----HHH---TCTTSCGGGEEECCHHHHHHHHHHHHHHHT
T ss_pred             --H-----HHH---HcCCCChhheeccchHHHHHHHHHHHHHhC
Confidence              0     000   001345666799999999999988887764

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=99.12  E-value=1.5e-10  Score=100.03  Aligned_cols=78  Identities=21%  Similarity=0.274  Sum_probs=59.3

Q ss_pred             CCCCCEEEEecC----------------CChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecC
Q 017812           56 GIKRPVCIVTGA----------------TSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDL  119 (365)
Q Consensus        56 ~~~~k~vlITGa----------------ssGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl  119 (365)
                      +++||+||||||                |||||+++|++|+++|++|++++++.. ++         .+. .+  -.+|+
T Consensus         5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~---------~~~-g~--~~~dv   71 (226)
T 1u7z_A            5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP---------TPP-FV--KRVDV   71 (226)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC---------CCT-TE--EEEEC
T ss_pred             CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc---------cCC-CC--eEEcc
Confidence            478999999999                689999999999999999999988652 10         011 12  34677


Q ss_pred             CChhhHHHHHHHHHHHHhccCCCCCeeEEEecCCcc
Q 017812          120 SSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL  155 (365)
Q Consensus       120 s~~~~v~~~~~~~~~~~~~~~~~~~id~lv~nAG~~  155 (365)
                      ++.+   ++++.+.+      .++++|++|||||+.
T Consensus        72 ~~~~---~~~~~v~~------~~~~~Dili~~Aav~   98 (226)
T 1u7z_A           72 MTAL---EMEAAVNA------SVQQQNIFIGCAAVA   98 (226)
T ss_dssp             CSHH---HHHHHHHH------HGGGCSEEEECCBCC
T ss_pred             CcHH---HHHHHHHH------hcCCCCEEEECCccc
Confidence            7754   45555655      346799999999986

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.94  E-value=2.8e-09  Score=90.89  Aligned_cols=103  Identities=14%  Similarity=0.090  Sum_probs=72.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .|++|+||||+||||.++++.+...|++|++++|++++.+.+.    +.  +..   ..+|.++.+..+.+.+..     
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~----~~--g~~---~~~d~~~~~~~~~~~~~~-----  103 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLS----RL--GVE---YVGDSRSVDFADEILELT-----  103 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH----TT--CCS---EEEETTCSTHHHHHHHHT-----
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----Hc--CCC---EEeeCCcHHHHHHHHHHh-----
Confidence            4899999999999999999999999999999999987665432    22  222   235777765443333221     


Q ss_pred             ccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017812          138 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  204 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~  204 (365)
                         ..+++|++|+|+|.         +               ..+.+++.++.   .|++|.+++..
T Consensus       104 ---~~~~~D~vi~~~g~---------~---------------~~~~~~~~l~~---~G~~v~~g~~~  140 (198)
T 1pqw_A          104 ---DGYGVDVVLNSLAG---------E---------------AIQRGVQILAP---GGRFIELGKKD  140 (198)
T ss_dssp             ---TTCCEEEEEECCCT---------H---------------HHHHHHHTEEE---EEEEEECSCGG
T ss_pred             ---CCCCCeEEEECCch---------H---------------HHHHHHHHhcc---CCEEEEEcCCC
Confidence               12469999999983         0               13445566654   48999998865

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.93  E-value=7.7e-10  Score=95.80  Aligned_cols=79  Identities=19%  Similarity=0.257  Sum_probs=57.6

Q ss_pred             CCCEEEEecC----------------CChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCC
Q 017812           58 KRPVCIVTGA----------------TSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSS  121 (365)
Q Consensus        58 ~~k~vlITGa----------------ssGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~  121 (365)
                      +||+||||||                ||++|.++|++|+++|++|++++|+....        ... ...+     |+.+
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~--------~~~-~~~~-----~~~~   67 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALK--------PEP-HPNL-----SIRE   67 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCC--------CCC-CTTE-----EEEE
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCcccc--------ccC-CCCe-----EEEE
Confidence            4899999999                78899999999999999999999975310        000 1122     3333


Q ss_pred             hhhHHHHHHHHHHHHhccCCCCCeeEEEecCCccc
Q 017812          122 FQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA  156 (365)
Q Consensus       122 ~~~v~~~~~~~~~~~~~~~~~~~id~lv~nAG~~~  156 (365)
                      .+++.++.+.+.+      ..+++|++|+|||+..
T Consensus        68 v~s~~em~~~v~~------~~~~~Dili~aAAvsD   96 (232)
T 2gk4_A           68 ITNTKDLLIEMQE------RVQDYQVLIHSMAVSD   96 (232)
T ss_dssp             CCSHHHHHHHHHH------HGGGCSEEEECSBCCS
T ss_pred             HhHHHHHHHHHHH------hcCCCCEEEEcCcccc
Confidence            3456666777766      3467999999999863

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.83  E-value=1.2e-08  Score=94.45  Aligned_cols=104  Identities=14%  Similarity=0.167  Sum_probs=75.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .|++|+||||+||||.++++.+...|++|++++|++++++.+ +++     +..   ..+|.++.+++.+.+.++.    
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~~-----g~~---~~~d~~~~~~~~~~~~~~~----  211 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQI-----GFD---AAFNYKTVNSLEEALKKAS----  211 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT-----TCS---EEEETTSCSCHHHHHHHHC----
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-Hhc-----CCc---EEEecCCHHHHHHHHHHHh----
Confidence            489999999999999999999999999999999998877665 333     222   3358877555555444432    


Q ss_pred             ccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017812          138 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  205 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~  205 (365)
                          .+++|++|+|+|.         +               ..+..++.++.   .|++|.+++..+
T Consensus       212 ----~~~~d~vi~~~g~---------~---------------~~~~~~~~l~~---~G~~v~~g~~~~  248 (333)
T 1v3u_A          212 ----PDGYDCYFDNVGG---------E---------------FLNTVLSQMKD---FGKIAICGAISV  248 (333)
T ss_dssp             ----TTCEEEEEESSCH---------H---------------HHHHHHTTEEE---EEEEEECCCCC-
T ss_pred             ----CCCCeEEEECCCh---------H---------------HHHHHHHHHhc---CCEEEEEecccc
Confidence                2579999999993         0               12344555544   589999987654

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.80  E-value=1.9e-08  Score=77.83  Aligned_cols=75  Identities=20%  Similarity=0.164  Sum_probs=61.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCC-CEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREG-FHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G-~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      .+++++|+|+ |+||.++++.|.+.| ++|++++|++++++...        ...+..+.+|+++.+++.+.+       
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~--------~~~~~~~~~d~~~~~~~~~~~-------   67 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN--------RMGVATKQVDAKDEAGLAKAL-------   67 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH--------TTTCEEEECCTTCHHHHHHHT-------
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH--------hCCCcEEEecCCCHHHHHHHH-------
Confidence            3578999999 999999999999999 89999999988766543        224667899999987766543       


Q ss_pred             hccCCCCCeeEEEecCCc
Q 017812          137 LDSDMHSSIQLLINNAGI  154 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~  154 (365)
                            ..+|++|+++|.
T Consensus        68 ------~~~d~vi~~~~~   79 (118)
T 3ic5_A           68 ------GGFDAVISAAPF   79 (118)
T ss_dssp             ------TTCSEEEECSCG
T ss_pred             ------cCCCEEEECCCc
Confidence                  258999999974

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=98.78  E-value=6.3e-11  Score=113.19  Aligned_cols=132  Identities=14%  Similarity=0.141  Sum_probs=77.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHH------hhcCCCceEEEEecCCChhhHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADIT------SRNKDARLEAFQVDLSSFQSVLKFK  129 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~------~~~~~~~~~~~~~Dls~~~~v~~~~  129 (365)
                      ++.||+|+|||++ |||+++|+.|+..|++|+++++++.++.++..+..      +.....++.+..  ....+-+..  
T Consensus       262 ~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~g~dv~~lee~~~~aDvVi~a--tG~~~vl~~--  336 (488)
T 3ond_A          262 MIAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPICALQATMEGLQVLTLEDVVSEADIFVTT--TGNKDIIML--  336 (488)
T ss_dssp             CCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCGGGTTTTCSEEEEC--SSCSCSBCH--
T ss_pred             cccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHhCCccCCHHHHHHhcCEEEeC--CCChhhhhH--
Confidence            3789999999998 99999999999999999999999887666544321      001111221111  111111111  


Q ss_pred             HHHHHHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHh-------HHHHhHHHHHHH-HHHhHhhhcCCCCCeEEEEc
Q 017812          130 DSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQM-------MSTNYIGAFFLT-KLLLPLLKNSPVPSRIVNVT  201 (365)
Q Consensus       130 ~~~~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~-------~~vN~~~~~~l~-~~~l~~~~~~~~~g~iV~vs  201 (365)
                       +..       ..-+.+.+|+|+|..  ..+.+.+.++..       +..|+.+.++.. +..++.|.    .|||||+|
T Consensus       337 -e~l-------~~mk~gaiVvNaG~~--~~Ei~~~~l~~~~~v~~~~i~~~v~~~~~~~fg~aI~lLa----eGRIVNls  402 (488)
T 3ond_A          337 -DHM-------KKMKNNAIVCNIGHF--DNEIDMLGLETHPGVKRITIKPQTDRWVFPETNTGIIILA----EGRLMNLG  402 (488)
T ss_dssp             -HHH-------TTSCTTEEEEESSST--TTTBTHHHHHTSTTCEEEEEETTEEEEECTTTCCEEEEEG----GGSCHHHH
T ss_pred             -HHH-------HhcCCCeEEEEcCCC--CcccchHHHHHhhhhheEEeeeeEEEEEecchHHHHHHHc----CCcEEEEe
Confidence             011       123456788888874  334555555544       233433333222 33344443    38999999


Q ss_pred             CCccc
Q 017812          202 SFTHR  206 (365)
Q Consensus       202 S~~~~  206 (365)
                      |..+.
T Consensus       403 S~~G~  407 (488)
T 3ond_A          403 CATGH  407 (488)
T ss_dssp             HSCCS
T ss_pred             cCccc
Confidence            98876

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.75  E-value=4e-08  Score=91.32  Aligned_cols=104  Identities=13%  Similarity=0.073  Sum_probs=77.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .|++|+||||+||||.++++.+...|++|++++|++++++.+. ++     +..   ..+|.++.+++.+.+.++..   
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~-~~-----g~~---~~~d~~~~~~~~~~~~~~~~---  236 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFR-SI-----GGE---VFIDFTKEKDIVGAVLKATD---  236 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHH-HT-----TCC---EEEETTTCSCHHHHHHHHHT---
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHH-Hc-----CCc---eEEecCccHhHHHHHHHHhC---
Confidence            4789999999999999999999999999999999988765432 22     222   23588866666666655442   


Q ss_pred             ccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017812          138 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  204 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~  204 (365)
                           +++|++|+|+|..                       ..++.+++.++.   .|++|.+++..
T Consensus       237 -----~~~D~vi~~~g~~-----------------------~~~~~~~~~l~~---~G~iv~~g~~~  272 (347)
T 2hcy_A          237 -----GGAHGVINVSVSE-----------------------AAIEASTRYVRA---NGTTVLVGMPA  272 (347)
T ss_dssp             -----SCEEEEEECSSCH-----------------------HHHHHHTTSEEE---EEEEEECCCCT
T ss_pred             -----CCCCEEEECCCcH-----------------------HHHHHHHHHHhc---CCEEEEEeCCC
Confidence                 3799999999941                       134556666654   48999998865

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=98.73  E-value=2.5e-09  Score=104.85  Aligned_cols=98  Identities=20%  Similarity=0.291  Sum_probs=66.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      ++++|+++|||| ||+|+++|+.|++.|++|++++|+.++++++.+++     +.++.    ++.|.+   ++       
T Consensus       361 ~l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~-----~~~~~----~~~dl~---~~-------  420 (523)
T 2o7s_A          361 PLASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAI-----GGKAL----SLTDLD---NY-------  420 (523)
T ss_dssp             -----CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHT-----TC-CE----ETTTTT---TC-------
T ss_pred             ccCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----CCcee----eHHHhh---hc-------
Confidence            367899999999 59999999999999999999999998888777665     22221    222211   00       


Q ss_pred             HhccCCCCCeeEEEecCCccc-------CCCCCCHHHHhHhHHHHhHHHH
Q 017812          136 LLDSDMHSSIQLLINNAGILA-------TSSRLTPEGYDQMMSTNYIGAF  178 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~-------~~~~~~~~~~~~~~~vN~~~~~  178 (365)
                           ....+|+||||+|+..       +..+.+.+.++.++++|+.+..
T Consensus       421 -----~~~~~DilVN~agvg~~~~~~~~~~~~~~~~~~~~v~Dvny~p~~  465 (523)
T 2o7s_A          421 -----HPEDGMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPRI  465 (523)
T ss_dssp             -------CCSEEEEECSSTTCTTCTTCCSSCTTTGGGEEEEEECCCSSSS
T ss_pred             -----cccCceEEEECCCCCCCCCCCCCCCChHHcCcCcEEEEEeeCCcc
Confidence                 1135899999999742       2233456778889999998753

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.71  E-value=5.7e-08  Score=92.19  Aligned_cols=83  Identities=19%  Similarity=0.294  Sum_probs=70.9

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCC---CEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           60 PVCIVTGATSGLGAAAAYALSREG---FHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G---~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      +.|+|+|| ||||+++++.|+++|   .+|++++|+.++++++.+++.... +.++..+.+|++|.+++++++++.    
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~-~~~~~~~~~D~~d~~~l~~~l~~~----   75 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKG-YGEIDITTVDADSIEELVALINEV----   75 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTT-CCCCEEEECCTTCHHHHHHHHHHH----
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhc-CCceEEEEecCCCHHHHHHHHHhh----
Confidence            46899999 899999999999998   499999999999999888886543 246889999999999998887653    


Q ss_pred             hccCCCCCeeEEEecCCcc
Q 017812          137 LDSDMHSSIQLLINNAGIL  155 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~  155 (365)
                             ++|+||||||..
T Consensus        76 -------~~DvVin~ag~~   87 (405)
T 4ina_A           76 -------KPQIVLNIALPY   87 (405)
T ss_dssp             -------CCSEEEECSCGG
T ss_pred             -------CCCEEEECCCcc
Confidence                   489999999853

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=98.69  E-value=1.2e-08  Score=83.69  Aligned_cols=76  Identities=14%  Similarity=0.082  Sum_probs=62.0

Q ss_pred             hHHHHHHHHHHHCCCEEEEEecCchhHH---HHHHHHHhhcCCCceEEEEecCCCh--hhHHHHHHHHHHHHhccCCCCC
Q 017812           70 GLGAAAAYALSREGFHVVLVGRSSHLLS---ETMADITSRNKDARLEAFQVDLSSF--QSVLKFKDSLQQWLLDSDMHSS  144 (365)
Q Consensus        70 GIG~~~a~~la~~G~~Vil~~r~~~~~~---~~~~~l~~~~~~~~~~~~~~Dls~~--~~v~~~~~~~~~~~~~~~~~~~  144 (365)
                      -++.+.++.|++.|++|++..|+.+...   +..+.+.+.  +.+...+++|++++  ++++++++.+.+      .+|+
T Consensus        27 ~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~--G~~~~~i~~Dv~~~~~~~v~~~~~~i~~------~~G~   98 (157)
T 3gxh_A           27 LPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQA--GMDYVYIPVDWQNPKVEDVEAFFAAMDQ------HKGK   98 (157)
T ss_dssp             CCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHT--TCEEEECCCCTTSCCHHHHHHHHHHHHH------TTTS
T ss_pred             CCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHc--CCeEEEecCCCCCCCHHHHHHHHHHHHh------cCCC
Confidence            4789999999999999999988765432   234444444  56788899999999  999999999987      6688


Q ss_pred             eeEEEecCCc
Q 017812          145 IQLLINNAGI  154 (365)
Q Consensus       145 id~lv~nAG~  154 (365)
                       |+||||||+
T Consensus        99 -dVLVnnAgg  107 (157)
T 3gxh_A           99 -DVLVHCLAN  107 (157)
T ss_dssp             -CEEEECSBS
T ss_pred             -CEEEECCCC
Confidence             999999997

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.67  E-value=6e-08  Score=89.34  Aligned_cols=104  Identities=12%  Similarity=0.096  Sum_probs=74.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .|++|+||||+||||.++++.+...|++|++++|++++++.+.+ +     +..   ..+|.++.+..+.+.+..     
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~-~-----g~~---~~~~~~~~~~~~~~~~~~-----  205 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-A-----GAW---QVINYREEDLVERLKEIT-----  205 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-H-----TCS---EEEETTTSCHHHHHHHHT-----
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c-----CCC---EEEECCCccHHHHHHHHh-----
Confidence            48999999999999999999999999999999999887765543 2     222   235777655444433321     


Q ss_pred             ccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017812          138 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  205 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~  205 (365)
                         ...++|++|+|+|.  .                      ..+..++.++.   .|++|.+++..+
T Consensus       206 ---~~~~~D~vi~~~g~--~----------------------~~~~~~~~l~~---~G~iv~~g~~~~  243 (327)
T 1qor_A          206 ---GGKKVRVVYDSVGR--D----------------------TWERSLDCLQR---RGLMVSFGNSSG  243 (327)
T ss_dssp             ---TTCCEEEEEECSCG--G----------------------GHHHHHHTEEE---EEEEEECCCTTC
T ss_pred             ---CCCCceEEEECCch--H----------------------HHHHHHHHhcC---CCEEEEEecCCC
Confidence               12469999999992  1                      12445555554   489999998654

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.67  E-value=5.5e-08  Score=91.16  Aligned_cols=109  Identities=18%  Similarity=0.191  Sum_probs=75.6

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      ..+++++|+|+|+ |+||+++++.+...|++|++++|++++++.+.+.+     +..   +.+|.++.+++.+.+.    
T Consensus       162 ~~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~-----g~~---~~~~~~~~~~l~~~~~----  228 (369)
T 2eez_A          162 PGVAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVF-----GGR---VITLTATEANIKKSVQ----  228 (369)
T ss_dssp             TBBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-----TTS---EEEEECCHHHHHHHHH----
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhc-----Cce---EEEecCCHHHHHHHHh----
Confidence            3578999999999 99999999999999999999999998876654433     222   4567777776655432    


Q ss_pred             HHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017812          135 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  205 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~  205 (365)
                               ..|++|+++|.....                 .+..+.+..++.|++   .++||++++..+
T Consensus       229 ---------~~DvVi~~~g~~~~~-----------------~~~li~~~~l~~mk~---gg~iV~v~~~~g  270 (369)
T 2eez_A          229 ---------HADLLIGAVLVPGAK-----------------APKLVTRDMLSLMKE---GAVIVDVAVDQG  270 (369)
T ss_dssp             ---------HCSEEEECCC------------------------CCSCHHHHTTSCT---TCEEEECC----
T ss_pred             ---------CCCEEEECCCCCccc-----------------cchhHHHHHHHhhcC---CCEEEEEecCCC
Confidence                     289999999974210                 112335667777753   589999998653

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.65  E-value=1e-07  Score=87.98  Aligned_cols=103  Identities=9%  Similarity=0.070  Sum_probs=73.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .|++|+||||+||||.++++.+...|++|++++|++++++.+.+ +     +..   ..+|.++.+..+.+.+..     
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~-~-----g~~---~~~d~~~~~~~~~i~~~~-----  210 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARK-L-----GCH---HTINYSTQDFAEVVREIT-----  210 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-H-----TCS---EEEETTTSCHHHHHHHHH-----
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c-----CCC---EEEECCCHHHHHHHHHHh-----
Confidence            47899999999999999999999999999999999887765532 3     222   235777655444333321     


Q ss_pred             ccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017812          138 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  204 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~  204 (365)
                         ...++|++|+|+|.  .                      ..+..++.++.   .|++|.+++..
T Consensus       211 ---~~~~~d~vi~~~g~--~----------------------~~~~~~~~l~~---~G~iv~~g~~~  247 (333)
T 1wly_A          211 ---GGKGVDVVYDSIGK--D----------------------TLQKSLDCLRP---RGMCAAYGHAS  247 (333)
T ss_dssp             ---TTCCEEEEEECSCT--T----------------------THHHHHHTEEE---EEEEEECCCTT
T ss_pred             ---CCCCCeEEEECCcH--H----------------------HHHHHHHhhcc---CCEEEEEecCC
Confidence               12469999999994  1                      13344555544   48999998765

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=98.62  E-value=2.5e-08  Score=90.28  Aligned_cols=79  Identities=18%  Similarity=0.320  Sum_probs=60.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      +++|+++|||++ |+|+++|+.|++.| +|++++|+.++++++.+++.......  ..+.+|+++.          .+  
T Consensus       126 l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~--~~~~~d~~~~----------~~--  189 (287)
T 1nvt_A          126 VKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKK--FGEEVKFSGL----------DV--  189 (287)
T ss_dssp             CCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCC--HHHHEEEECT----------TC--
T ss_pred             cCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccc--cceeEEEeeH----------HH--
Confidence            678999999997 99999999999999 99999999999888887775432101  0123455542          11  


Q ss_pred             hccCCCCCeeEEEecCCcc
Q 017812          137 LDSDMHSSIQLLINNAGIL  155 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~  155 (365)
                          ..+++|+||||+|+.
T Consensus       190 ----~~~~~DilVn~ag~~  204 (287)
T 1nvt_A          190 ----DLDGVDIIINATPIG  204 (287)
T ss_dssp             ----CCTTCCEEEECSCTT
T ss_pred             ----hhCCCCEEEECCCCC
Confidence                457899999999975

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=98.61  E-value=1.5e-07  Score=87.77  Aligned_cols=104  Identities=13%  Similarity=0.057  Sum_probs=72.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .|++|+||||+||||.++++.+...|++|++++|++++++.+ +++     +..   ..+|.++.+..+.+.    +.. 
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~-----g~~---~~~~~~~~~~~~~~~----~~~-  227 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA-EKL-----GAA---AGFNYKKEDFSEATL----KFT-  227 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHH-----TCS---EEEETTTSCHHHHHH----HHT-
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc-----CCc---EEEecCChHHHHHHH----HHh-
Confidence            489999999999999999999999999999999998887665 333     222   235776654433332    211 


Q ss_pred             ccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017812          138 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  205 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~  205 (365)
                         ...++|++|+|+|..         .               .+..++.++.   .|++|.++...+
T Consensus       228 ---~~~~~d~vi~~~G~~---------~---------------~~~~~~~l~~---~G~iv~~G~~~~  265 (354)
T 2j8z_A          228 ---KGAGVNLILDCIGGS---------Y---------------WEKNVNCLAL---DGRWVLYGLMGG  265 (354)
T ss_dssp             ---TTSCEEEEEESSCGG---------G---------------HHHHHHHEEE---EEEEEECCCTTC
T ss_pred             ---cCCCceEEEECCCch---------H---------------HHHHHHhccC---CCEEEEEeccCC
Confidence               124699999999941         0               2334455544   489999987543

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=98.61  E-value=8.9e-08  Score=88.86  Aligned_cols=105  Identities=12%  Similarity=0.070  Sum_probs=74.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .|++|+||||+||||..+++.+...|++|++++|++++++.+.+++     +..   ..+|.++.+++.+.+.++.    
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~-----g~~---~~~d~~~~~~~~~~~~~~~----  222 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKF-----GFD---DAFNYKEESDLTAALKRCF----  222 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTS-----CCS---EEEETTSCSCSHHHHHHHC----
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-----CCc---eEEecCCHHHHHHHHHHHh----
Confidence            4899999999999999999999999999999999988776554333     222   2347776545544444321    


Q ss_pred             ccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017812          138 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  205 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~  205 (365)
                          .+++|++|+|+|..                        ..+..++.++.   .|++|.++...+
T Consensus       223 ----~~~~d~vi~~~g~~------------------------~~~~~~~~l~~---~G~~v~~G~~~~  259 (345)
T 2j3h_A          223 ----PNGIDIYFENVGGK------------------------MLDAVLVNMNM---HGRIAVCGMISQ  259 (345)
T ss_dssp             ----TTCEEEEEESSCHH------------------------HHHHHHTTEEE---EEEEEECCCGGG
T ss_pred             ----CCCCcEEEECCCHH------------------------HHHHHHHHHhc---CCEEEEEccccc
Confidence                25799999999830                        13445555544   589999876543

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=98.60  E-value=1.7e-07  Score=87.39  Aligned_cols=102  Identities=13%  Similarity=0.162  Sum_probs=71.5

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhc
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  138 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~  138 (365)
                      ++|+||||+||||..+++.+...|+ +|+++++++++++.+.+++     +..   ..+|.++.+ +.+.+.+.      
T Consensus       162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~-----g~~---~~~d~~~~~-~~~~~~~~------  226 (357)
T 2zb4_A          162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSEL-----GFD---AAINYKKDN-VAEQLRES------  226 (357)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTS-----CCS---EEEETTTSC-HHHHHHHH------
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc-----CCc---eEEecCchH-HHHHHHHh------
Confidence            8999999999999999999999999 9999999987776554433     222   235777643 22222222      


Q ss_pred             cCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017812          139 SDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  205 (365)
Q Consensus       139 ~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~  205 (365)
                        ..+++|++|+|+|.         +               ..+.+++.++.   .|++|.++...+
T Consensus       227 --~~~~~d~vi~~~G~---------~---------------~~~~~~~~l~~---~G~iv~~G~~~~  264 (357)
T 2zb4_A          227 --CPAGVDVYFDNVGG---------N---------------ISDTVISQMNE---NSHIILCGQISQ  264 (357)
T ss_dssp             --CTTCEEEEEESCCH---------H---------------HHHHHHHTEEE---EEEEEECCCGGG
T ss_pred             --cCCCCCEEEECCCH---------H---------------HHHHHHHHhcc---CcEEEEECCccc
Confidence              12379999999993         0               23345555554   489999987653

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=98.57  E-value=2.1e-07  Score=86.05  Aligned_cols=104  Identities=15%  Similarity=0.205  Sum_probs=73.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .|++|+||||+||||..+++.+...|++|++++|++++++.+.+++     +..   ..+|.++.+..+.    +.+.  
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~-----g~~---~~~~~~~~~~~~~----~~~~--  214 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEEL-----GFD---GAIDYKNEDLAAG----LKRE--  214 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT-----CCS---EEEETTTSCHHHH----HHHH--
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-----CCC---EEEECCCHHHHHH----HHHh--
Confidence            4899999999999999999999999999999999988876654443     222   2346666443322    2221  


Q ss_pred             ccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017812          138 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  205 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~  205 (365)
                         ..+++|++|+|+|..                        ..+.+++.++.   .|++|.+++..+
T Consensus       215 ---~~~~~d~vi~~~g~~------------------------~~~~~~~~l~~---~G~iv~~G~~~~  252 (336)
T 4b7c_A          215 ---CPKGIDVFFDNVGGE------------------------ILDTVLTRIAF---KARIVLCGAISQ  252 (336)
T ss_dssp             ---CTTCEEEEEESSCHH------------------------HHHHHHTTEEE---EEEEEECCCGGG
T ss_pred             ---cCCCceEEEECCCcc------------------------hHHHHHHHHhh---CCEEEEEeeccc
Confidence               225799999999941                        23345555554   589999988664

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.51  E-value=1.6e-07  Score=90.11  Aligned_cols=78  Identities=12%  Similarity=0.101  Sum_probs=61.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      ++++|+||| +||||+++++.|++.|++|++++|+.++++++.+++      ..+..+.+|++|.+++.++++       
T Consensus         2 ~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~------~~~~~~~~Dv~d~~~l~~~l~-------   67 (450)
T 1ff9_A            2 ATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV------QHSTPISLDVNDDAALDAEVA-------   67 (450)
T ss_dssp             CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTC------TTEEEEECCTTCHHHHHHHHT-------
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhc------CCceEEEeecCCHHHHHHHHc-------
Confidence            468899998 799999999999999999999999987765443221      136788999999887766542       


Q ss_pred             ccCCCCCeeEEEecCCcc
Q 017812          138 DSDMHSSIQLLINNAGIL  155 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~  155 (365)
                            .+|+|||+++..
T Consensus        68 ------~~DvVIn~a~~~   79 (450)
T 1ff9_A           68 ------KHDLVISLIPYT   79 (450)
T ss_dssp             ------TSSEEEECCC--
T ss_pred             ------CCcEEEECCccc
Confidence                  499999999863

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=98.51  E-value=4.4e-07  Score=84.45  Aligned_cols=80  Identities=15%  Similarity=0.176  Sum_probs=58.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .|++|+||||+||||.++++.+...|++|++++|++++++.+ +++     +..   ..+|.++.+..+.+    .+.. 
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~-----ga~---~~~d~~~~~~~~~~----~~~~-  235 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV-LQN-----GAH---EVFNHREVNYIDKI----KKYV-  235 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT-----TCS---EEEETTSTTHHHHH----HHHH-
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHH-HHc-----CCC---EEEeCCCchHHHHH----HHHc-
Confidence            488999999999999999999999999999999998877633 222     222   23577765433333    2221 


Q ss_pred             ccCCCCCeeEEEecCCc
Q 017812          138 DSDMHSSIQLLINNAGI  154 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~  154 (365)
                         ...++|++|+|+|.
T Consensus       236 ---~~~~~D~vi~~~G~  249 (351)
T 1yb5_A          236 ---GEKGIDIIIEMLAN  249 (351)
T ss_dssp             ---CTTCEEEEEESCHH
T ss_pred             ---CCCCcEEEEECCCh
Confidence               22479999999983

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.46  E-value=1.1e-06  Score=80.05  Aligned_cols=83  Identities=18%  Similarity=0.259  Sum_probs=64.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecC---chhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRS---SHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDS  131 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~---~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~  131 (365)
                      +++||+++|+|+ ||+|++++..|++.|+ +|++++|+   .++++++.+++....+   +.+...++.+.+++.+.   
T Consensus       151 ~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~---~~~~~~~~~~~~~l~~~---  223 (315)
T 3tnl_A          151 DIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTD---CKAQLFDIEDHEQLRKE---  223 (315)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSS---CEEEEEETTCHHHHHHH---
T ss_pred             CccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcC---CceEEeccchHHHHHhh---
Confidence            478999999998 7999999999999999 99999999   8888888888876542   23344566665544332   


Q ss_pred             HHHHHhccCCCCCeeEEEecCCcc
Q 017812          132 LQQWLLDSDMHSSIQLLINNAGIL  155 (365)
Q Consensus       132 ~~~~~~~~~~~~~id~lv~nAG~~  155 (365)
                      +.          ..|+|||+..+.
T Consensus       224 l~----------~aDiIINaTp~G  237 (315)
T 3tnl_A          224 IA----------ESVIFTNATGVG  237 (315)
T ss_dssp             HH----------TCSEEEECSSTT
T ss_pred             hc----------CCCEEEECccCC
Confidence            22          389999988653

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=98.43  E-value=9.7e-07  Score=81.79  Aligned_cols=104  Identities=16%  Similarity=0.117  Sum_probs=72.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .|++|+|+||+||||..+++.+...|++|+++++++++++.+. ++     +..   ..+|.++.+ +.+   .+.+.. 
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~-----ga~---~~~d~~~~~-~~~---~~~~~~-  231 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK-AL-----GAD---ETVNYTHPD-WPK---EVRRLT-  231 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HH-----TCS---EEEETTSTT-HHH---HHHHHT-
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hc-----CCC---EEEcCCccc-HHH---HHHHHh-
Confidence            4789999999999999999999999999999999988876653 23     222   125777653 222   222211 


Q ss_pred             ccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017812          138 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  205 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~  205 (365)
                         ...++|++|+|+| . .                      ..+..++.++.   .|++|.+++..+
T Consensus       232 ---~~~~~d~vi~~~g-~-~----------------------~~~~~~~~l~~---~G~~v~~g~~~~  269 (343)
T 2eih_A          232 ---GGKGADKVVDHTG-A-L----------------------YFEGVIKATAN---GGRIAIAGASSG  269 (343)
T ss_dssp             ---TTTCEEEEEESSC-S-S----------------------SHHHHHHHEEE---EEEEEESSCCCS
T ss_pred             ---CCCCceEEEECCC-H-H----------------------HHHHHHHhhcc---CCEEEEEecCCC
Confidence               1247999999999 2 1                      12344555544   489999988653

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=98.37  E-value=1.7e-06  Score=80.42  Aligned_cols=104  Identities=13%  Similarity=0.134  Sum_probs=72.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .|++|+|+||+||||..++..+...|++|+++++++++++.+.+ +     +..   ..+|.++.+..+.+.+ .     
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-l-----Ga~---~~~~~~~~~~~~~~~~-~-----  231 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACER-L-----GAK---RGINYRSEDFAAVIKA-E-----  231 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-H-----TCS---EEEETTTSCHHHHHHH-H-----
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c-----CCC---EEEeCCchHHHHHHHH-H-----
Confidence            48899999999999999999999999999999999988765543 3     222   1246555443333222 1     


Q ss_pred             ccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccc
Q 017812          138 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHR  206 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~  206 (365)
                         ..+++|++|+|+|..                        ..+..++.++.   .|+++.+++..+.
T Consensus       232 ---~~~g~Dvvid~~g~~------------------------~~~~~~~~l~~---~G~iv~~g~~~~~  270 (353)
T 4dup_A          232 ---TGQGVDIILDMIGAA------------------------YFERNIASLAK---DGCLSIIAFLGGA  270 (353)
T ss_dssp             ---HSSCEEEEEESCCGG------------------------GHHHHHHTEEE---EEEEEECCCTTCS
T ss_pred             ---hCCCceEEEECCCHH------------------------HHHHHHHHhcc---CCEEEEEEecCCC
Confidence               125799999999941                        12334455544   5899999876543

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.34  E-value=1.2e-06  Score=78.37  Aligned_cols=76  Identities=13%  Similarity=0.150  Sum_probs=58.0

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      +++|+++|+|+ ||+|+++++.|++.|++|++++|+.++++++.+++...  + .+.  ..|+   +++       .   
T Consensus       117 l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~--~-~~~--~~~~---~~~-------~---  177 (271)
T 1nyt_A          117 RPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHT--G-SIQ--ALSM---DEL-------E---  177 (271)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGG--S-SEE--ECCS---GGG-------T---
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhcc--C-Cee--EecH---HHh-------c---
Confidence            57899999998 79999999999999999999999999888887776432  1 221  2332   221       0   


Q ss_pred             hccCCCCCeeEEEecCCccc
Q 017812          137 LDSDMHSSIQLLINNAGILA  156 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~  156 (365)
                          . +.+|++|||+|...
T Consensus       178 ----~-~~~DivVn~t~~~~  192 (271)
T 1nyt_A          178 ----G-HEFDLIINATSSGI  192 (271)
T ss_dssp             ----T-CCCSEEEECCSCGG
T ss_pred             ----c-CCCCEEEECCCCCC
Confidence                2 46999999999753

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=98.34  E-value=1.8e-06  Score=79.37  Aligned_cols=104  Identities=12%  Similarity=0.058  Sum_probs=72.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .|++|+|+||+||||..++..+...|++|+++++++++++.+. ++     +..   ..+|.++.+..+.    +.+.. 
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~-----Ga~---~~~~~~~~~~~~~----~~~~~-  205 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK-AL-----GAW---ETIDYSHEDVAKR----VLELT-  205 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HH-----TCS---EEEETTTSCHHHH----HHHHT-
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc-----CCC---EEEeCCCccHHHH----HHHHh-
Confidence            4899999999999999999999999999999999988876554 33     222   2245555443333    22221 


Q ss_pred             ccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017812          138 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  205 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~  205 (365)
                         ...++|++|+|+|..                        ..+..++.++.   .|++|.+++..+
T Consensus       206 ---~~~g~Dvvid~~g~~------------------------~~~~~~~~l~~---~G~iv~~g~~~~  243 (325)
T 3jyn_A          206 ---DGKKCPVVYDGVGQD------------------------TWLTSLDSVAP---RGLVVSFGNASG  243 (325)
T ss_dssp             ---TTCCEEEEEESSCGG------------------------GHHHHHTTEEE---EEEEEECCCTTC
T ss_pred             ---CCCCceEEEECCChH------------------------HHHHHHHHhcC---CCEEEEEecCCC
Confidence               224799999999941                        12334555544   589999987654

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=98.33  E-value=2.1e-06  Score=82.56  Aligned_cols=110  Identities=15%  Similarity=0.157  Sum_probs=74.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEE--ecCC---------ChhhHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQ--VDLS---------SFQSVL  126 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~--~Dls---------~~~~v~  126 (365)
                      .|++|+|+||+||||..++..+...|++|+++++++++++.+. ++     +....+-.  .|+.         +.++++
T Consensus       220 ~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~-~l-----Ga~~~i~~~~~~~~~~~~~~~~~~~~~~~  293 (447)
T 4a0s_A          220 QGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVR-AL-----GCDLVINRAELGITDDIADDPRRVVETGR  293 (447)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HT-----TCCCEEEHHHHTCCTTGGGCHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hc-----CCCEEEecccccccccccccccccchhhh
Confidence            5899999999999999999999999999999999988776542 22     22222211  1221         123445


Q ss_pred             HHHHHHHHHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017812          127 KFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  205 (365)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~  205 (365)
                      .+.+++.+..     .+++|++|+++|..                        ..+..++.++.   .|+||.+++..+
T Consensus       294 ~~~~~v~~~~-----g~g~Dvvid~~G~~------------------------~~~~~~~~l~~---~G~iv~~G~~~~  340 (447)
T 4a0s_A          294 KLAKLVVEKA-----GREPDIVFEHTGRV------------------------TFGLSVIVARR---GGTVVTCGSSSG  340 (447)
T ss_dssp             HHHHHHHHHH-----SSCCSEEEECSCHH------------------------HHHHHHHHSCT---TCEEEESCCTTC
T ss_pred             HHHHHHHHHh-----CCCceEEEECCCch------------------------HHHHHHHHHhc---CCEEEEEecCCC
Confidence            5566666542     24699999999940                        11334455543   589999998764

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.33  E-value=1.9e-06  Score=68.92  Aligned_cols=75  Identities=16%  Similarity=0.168  Sum_probs=59.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      ++++++|+|+ |.+|.++|+.|.++|++|+++++++++.+++.+.        .+.++..|.++++.++++         
T Consensus         5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~--------~~~~~~gd~~~~~~l~~~---------   66 (141)
T 3llv_A            5 GRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDE--------GFDAVIADPTDESFYRSL---------   66 (141)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT--------TCEEEECCTTCHHHHHHS---------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHC--------CCcEEECCCCCHHHHHhC---------
Confidence            4568999998 7799999999999999999999998876654421        356788999998766543         


Q ss_pred             ccCCCCCeeEEEecCC
Q 017812          138 DSDMHSSIQLLINNAG  153 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG  153 (365)
                         .....|++|.+.+
T Consensus        67 ---~~~~~d~vi~~~~   79 (141)
T 3llv_A           67 ---DLEGVSAVLITGS   79 (141)
T ss_dssp             ---CCTTCSEEEECCS
T ss_pred             ---CcccCCEEEEecC
Confidence               1246899998776

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=98.32  E-value=3e-06  Score=76.16  Aligned_cols=80  Identities=19%  Similarity=0.248  Sum_probs=61.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      ++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++++++.+++...+++.++.  ..+..+   +.+.   +.+
T Consensus       124 ~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~--~~~~~~---l~~~---l~~  194 (283)
T 3jyo_A          124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVV--GVDARG---IEDV---IAA  194 (283)
T ss_dssp             TCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEE--EECSTT---HHHH---HHH
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEE--EcCHHH---HHHH---Hhc
Confidence            367999999998 7999999999999998 79999999999999999987765443433  344333   3222   222


Q ss_pred             HHhccCCCCCeeEEEecCCc
Q 017812          135 WLLDSDMHSSIQLLINNAGI  154 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~  154 (365)
                                .|++||+..+
T Consensus       195 ----------~DiVInaTp~  204 (283)
T 3jyo_A          195 ----------ADGVVNATPM  204 (283)
T ss_dssp             ----------SSEEEECSST
T ss_pred             ----------CCEEEECCCC
Confidence                      7999998865

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.31  E-value=1e-06  Score=84.84  Aligned_cols=79  Identities=10%  Similarity=0.056  Sum_probs=61.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHC-CCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSRE-GFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~-G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      +++++.|+|+|| ||+|+++++.|++. |++|++++|+.++++++.+.    .   .+..+.+|++|.+++.++++    
T Consensus        20 ~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~----~---~~~~~~~D~~d~~~l~~~l~----   87 (467)
T 2axq_A           20 RHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP----S---GSKAISLDVTDDSALDKVLA----   87 (467)
T ss_dssp             ---CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG----G---TCEEEECCTTCHHHHHHHHH----
T ss_pred             CCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh----c---CCcEEEEecCCHHHHHHHHc----
Confidence            467899999998 99999999999998 68999999998877665433    1   24667899999887665542    


Q ss_pred             HHhccCCCCCeeEEEecCCcc
Q 017812          135 WLLDSDMHSSIQLLINNAGIL  155 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~  155 (365)
                               .+|+|||+++..
T Consensus        88 ---------~~DvVIn~tp~~   99 (467)
T 2axq_A           88 ---------DNDVVISLIPYT   99 (467)
T ss_dssp             ---------TSSEEEECSCGG
T ss_pred             ---------CCCEEEECCchh
Confidence                     389999999964

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=98.31  E-value=1.9e-06  Score=79.42  Aligned_cols=104  Identities=15%  Similarity=0.207  Sum_probs=71.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .|++|+|+||+||||..++..+...|++|+++++++++++.+ +++     +..   ..+|.++.+..+.    +.+.. 
T Consensus       148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~-----ga~---~~~~~~~~~~~~~----~~~~~-  213 (334)
T 3qwb_A          148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIA-KEY-----GAE---YLINASKEDILRQ----VLKFT-  213 (334)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT-----TCS---EEEETTTSCHHHH----HHHHT-
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHc-----CCc---EEEeCCCchHHHH----HHHHh-
Confidence            489999999999999999999999999999999998877643 222     222   2245555433322    22221 


Q ss_pred             ccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017812          138 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  205 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~  205 (365)
                         ...++|++|+|+|..                        ..+.+++.++.   .|++|.++...+
T Consensus       214 ---~~~g~D~vid~~g~~------------------------~~~~~~~~l~~---~G~iv~~G~~~~  251 (334)
T 3qwb_A          214 ---NGKGVDASFDSVGKD------------------------TFEISLAALKR---KGVFVSFGNASG  251 (334)
T ss_dssp             ---TTSCEEEEEECCGGG------------------------GHHHHHHHEEE---EEEEEECCCTTC
T ss_pred             ---CCCCceEEEECCChH------------------------HHHHHHHHhcc---CCEEEEEcCCCC
Confidence               124799999999941                        12334455544   589999987654

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=98.30  E-value=2.8e-06  Score=78.61  Aligned_cols=80  Identities=18%  Similarity=0.169  Sum_probs=57.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .|++|+|+||+||||..++..+...|++|+++++++++++.+.+ +     +...   .+|.++.+..+.    +.+.. 
T Consensus       144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-l-----ga~~---~~~~~~~~~~~~----~~~~~-  209 (340)
T 3gms_A          144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR-L-----GAAY---VIDTSTAPLYET----VMELT-  209 (340)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-H-----TCSE---EEETTTSCHHHH----HHHHT-
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-C-----CCcE---EEeCCcccHHHH----HHHHh-
Confidence            48899999999999999999999999999999999988766543 3     3221   235555433222    22221 


Q ss_pred             ccCCCCCeeEEEecCCc
Q 017812          138 DSDMHSSIQLLINNAGI  154 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~  154 (365)
                         ...++|++|+|+|.
T Consensus       210 ---~~~g~Dvvid~~g~  223 (340)
T 3gms_A          210 ---NGIGADAAIDSIGG  223 (340)
T ss_dssp             ---TTSCEEEEEESSCH
T ss_pred             ---CCCCCcEEEECCCC
Confidence               22479999999995

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.28  E-value=9.2e-07  Score=70.66  Aligned_cols=77  Identities=19%  Similarity=0.224  Sum_probs=56.6

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      +++++++|+|+ |++|..+++.|.+.|++|++++|++++.+.+    .+.    ....+..|.++.+.+.++        
T Consensus         4 ~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~----~~~----~~~~~~~d~~~~~~l~~~--------   66 (144)
T 2hmt_A            4 IKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAY----ASY----ATHAVIANATEENELLSL--------   66 (144)
T ss_dssp             --CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTT----TTT----CSEEEECCTTCHHHHHTT--------
T ss_pred             CcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HHh----CCEEEEeCCCCHHHHHhc--------
Confidence            55778999998 9999999999999999999999997654432    111    235677898886554332        


Q ss_pred             hccCCCCCeeEEEecCCc
Q 017812          137 LDSDMHSSIQLLINNAGI  154 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~  154 (365)
                          .....|++|++++.
T Consensus        67 ----~~~~~d~vi~~~~~   80 (144)
T 2hmt_A           67 ----GIRNFEYVIVAIGA   80 (144)
T ss_dssp             ----TGGGCSEEEECCCS
T ss_pred             ----CCCCCCEEEECCCC
Confidence                12458999999884

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=98.26  E-value=8.8e-06  Score=75.49  Aligned_cols=103  Identities=12%  Similarity=0.118  Sum_probs=70.2

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhc
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  138 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~  138 (365)
                      +++++|+||+||||...+..+...|++|+++++++++++.+. ++     +..   ..+|..+.+-.+. +.++..    
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~~-----Ga~---~~~~~~~~~~~~~-v~~~~~----  230 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK-DI-----GAA---HVLNEKAPDFEAT-LREVMK----  230 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHH-HH-----TCS---EEEETTSTTHHHH-HHHHHH----
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc-----CCC---EEEECCcHHHHHH-HHHHhc----
Confidence            489999999999999999999999999999999998876654 33     322   1245555333222 222221    


Q ss_pred             cCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017812          139 SDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  205 (365)
Q Consensus       139 ~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~  205 (365)
                         ..++|++++++|..                        .++.+++.++.   .|++|.+++..+
T Consensus       231 ---~~g~D~vid~~g~~------------------------~~~~~~~~l~~---~G~iv~~G~~~~  267 (349)
T 3pi7_A          231 ---AEQPRIFLDAVTGP------------------------LASAIFNAMPK---RARWIIYGRLDP  267 (349)
T ss_dssp             ---HHCCCEEEESSCHH------------------------HHHHHHHHSCT---TCEEEECCCSCC
T ss_pred             ---CCCCcEEEECCCCh------------------------hHHHHHhhhcC---CCEEEEEeccCC
Confidence               13699999999941                        01234455543   589999987654

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=98.25  E-value=4.2e-06  Score=78.24  Aligned_cols=100  Identities=15%  Similarity=0.199  Sum_probs=69.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCc---hhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS---HLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  132 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~---~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~  132 (365)
                      +++|++|+|+|| ||||..++..+...|++|+++++++   ++.+.+ +++     +.  ..+  | .+ +-.+.+ .+ 
T Consensus       178 ~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~-~~~-----ga--~~v--~-~~-~~~~~~-~~-  242 (366)
T 2cdc_A          178 TLNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVI-EET-----KT--NYY--N-SS-NGYDKL-KD-  242 (366)
T ss_dssp             SSTTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHH-HHH-----TC--EEE--E-CT-TCSHHH-HH-
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHH-HHh-----CC--cee--c-hH-HHHHHH-HH-
Confidence            467999999999 9999999999999999999999998   766433 333     32  222  5 54 222222 22 


Q ss_pred             HHHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHH-HHHhHhhhcCCCCCeEEEEcCCc
Q 017812          133 QQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLT-KLLLPLLKNSPVPSRIVNVTSFT  204 (365)
Q Consensus       133 ~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~-~~~l~~~~~~~~~g~iV~vsS~~  204 (365)
                      .       . +++|++|+++|...                       .+ +.+++.++.   .|++|+++...
T Consensus       243 ~-------~-~~~d~vid~~g~~~-----------------------~~~~~~~~~l~~---~G~iv~~g~~~  281 (366)
T 2cdc_A          243 S-------V-GKFDVIIDATGADV-----------------------NILGNVIPLLGR---NGVLGLFGFST  281 (366)
T ss_dssp             H-------H-CCEEEEEECCCCCT-----------------------HHHHHHGGGEEE---EEEEEECSCCC
T ss_pred             h-------C-CCCCEEEECCCChH-----------------------HHHHHHHHHHhc---CCEEEEEecCC
Confidence            1       2 56999999999521                       23 556677754   48999998754

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=98.25  E-value=5.7e-06  Score=76.11  Aligned_cols=159  Identities=11%  Similarity=0.074  Sum_probs=103.2

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCC-------EEEEEecC----chhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHH
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGF-------HVVLVGRS----SHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKF  128 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~-------~Vil~~r~----~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~  128 (365)
                      ..|+||||+|.||..++..|+.+|.       .|++++++    +++++....++....  ...   ..|+....+..+.
T Consensus         6 ~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~--~~~---~~~i~~~~~~~~a   80 (329)
T 1b8p_A            6 MRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCA--FPL---LAGMTAHADPMTA   80 (329)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTT--CTT---EEEEEEESSHHHH
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhc--ccc---cCcEEEecCcHHH
Confidence            4799999999999999999999985       79999998    666666566665421  111   1244433333332


Q ss_pred             HHHHHHHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccc
Q 017812          129 KDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNV  208 (365)
Q Consensus       129 ~~~~~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~  208 (365)
                      +             ...|++|+.||.... ...+.   .+.+..|+-....+++.+..+-   +..++||++|.......
T Consensus        81 l-------------~~aD~Vi~~ag~~~~-~g~~r---~dl~~~N~~i~~~i~~~i~~~~---~p~a~ii~~SNPv~~~t  140 (329)
T 1b8p_A           81 F-------------KDADVALLVGARPRG-PGMER---KDLLEANAQIFTVQGKAIDAVA---SRNIKVLVVGNPANTNA  140 (329)
T ss_dssp             T-------------TTCSEEEECCCCCCC-TTCCH---HHHHHHHHHHHHHHHHHHHHHS---CTTCEEEECSSSHHHHH
T ss_pred             h-------------CCCCEEEEeCCCCCC-CCCCH---HHHHHHHHHHHHHHHHHHHHhc---CCCeEEEEccCchHHHH
Confidence            2             358999999997543 22233   3467889888888888776652   12479999998653311


Q ss_pred             ccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhC
Q 017812          209 FNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLG  254 (365)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~  254 (365)
                      +-..-           ...++|....|+.++.--..+...++..+.
T Consensus       141 ~~~~~-----------~~~~~p~~~v~g~t~Ld~~r~~~~la~~lg  175 (329)
T 1b8p_A          141 YIAMK-----------SAPSLPAKNFTAMLRLDHNRALSQIAAKTG  175 (329)
T ss_dssp             HHHHH-----------TCTTSCGGGEEECCHHHHHHHHHHHHHHHT
T ss_pred             HHHHH-----------HcCCCCHHHEEEeecHHHHHHHHHHHHHhC
Confidence            10000           001344555688888766677778888775

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=98.24  E-value=5.4e-06  Score=76.84  Aligned_cols=104  Identities=15%  Similarity=0.172  Sum_probs=71.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHC-CCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSRE-GFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~-G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      .|++|+||||+||||..++..+... |++|+++++++++++.+. ++     +..   ..+|.++.+..+.    +.+..
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~-~~-----g~~---~~~~~~~~~~~~~----~~~~~  236 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK-RA-----GAD---YVINASMQDPLAE----IRRIT  236 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH-HH-----TCS---EEEETTTSCHHHH----HHHHT
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hh-----CCC---EEecCCCccHHHH----HHHHh
Confidence            4789999999999999999999999 999999999988776553 33     222   2246666443322    22211


Q ss_pred             hccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017812          137 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  204 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~  204 (365)
                          ..+++|++|+|+|..                       ...+..++.++.   .|++|.++...
T Consensus       237 ----~~~~~d~vi~~~g~~-----------------------~~~~~~~~~l~~---~G~iv~~g~~~  274 (347)
T 1jvb_A          237 ----ESKGVDAVIDLNNSE-----------------------KTLSVYPKALAK---QGKYVMVGLFG  274 (347)
T ss_dssp             ----TTSCEEEEEESCCCH-----------------------HHHTTGGGGEEE---EEEEEECCSSC
T ss_pred             ----cCCCceEEEECCCCH-----------------------HHHHHHHHHHhc---CCEEEEECCCC
Confidence                115799999999951                       123344555544   48999988754

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=98.23  E-value=6.1e-06  Score=76.38  Aligned_cols=103  Identities=17%  Similarity=0.165  Sum_probs=66.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .|++|+|+||+||||..++..+...|++|+++++++++.+.+.+ +     +.. .+  .|..  +++.+   .+.+.. 
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~-----ga~-~v--~~~~--~~~~~---~v~~~~-  223 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKS-V-----GAD-IV--LPLE--EGWAK---AVREAT-  223 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-H-----TCS-EE--EESS--TTHHH---HHHHHT-
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c-----CCc-EE--ecCc--hhHHH---HHHHHh-
Confidence            48999999999999999999999999999999999988755443 3     222 12  2433  23323   333321 


Q ss_pred             ccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017812          138 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  205 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~  205 (365)
                         ...++|++|+++|..                        ..+.++..++.   .|++|.++...+
T Consensus       224 ---~~~g~Dvvid~~g~~------------------------~~~~~~~~l~~---~G~iv~~G~~~~  261 (342)
T 4eye_A          224 ---GGAGVDMVVDPIGGP------------------------AFDDAVRTLAS---EGRLLVVGFAAG  261 (342)
T ss_dssp             ---TTSCEEEEEESCC--------------------------CHHHHHHTEEE---EEEEEEC-----
T ss_pred             ---CCCCceEEEECCchh------------------------HHHHHHHhhcC---CCEEEEEEccCC
Confidence               123799999999951                        02234455544   589999987553

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=98.22  E-value=6.8e-06  Score=76.68  Aligned_cols=103  Identities=16%  Similarity=0.169  Sum_probs=70.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .|++|+|+||+||||..++..+...|++|+++++++++++.+.+ +     +...   .+|.++. ++.+.   +.+.  
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~-~-----Ga~~---~~~~~~~-~~~~~---~~~~--  227 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS-L-----GCDR---PINYKTE-PVGTV---LKQE--  227 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-T-----TCSE---EEETTTS-CHHHH---HHHH--
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-c-----CCcE---EEecCCh-hHHHH---HHHh--
Confidence            47899999999999999999999999999999999877655432 2     3221   2355443 23222   2221  


Q ss_pred             ccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017812          138 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  205 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~  205 (365)
                         ..+++|++|+++|.         +               ..+.+++.++.   .|++|.+++..+
T Consensus       228 ---~~~g~D~vid~~g~---------~---------------~~~~~~~~l~~---~G~iv~~g~~~~  265 (362)
T 2c0c_A          228 ---YPEGVDVVYESVGG---------A---------------MFDLAVDALAT---KGRLIVIGFISG  265 (362)
T ss_dssp             ---CTTCEEEEEECSCT---------H---------------HHHHHHHHEEE---EEEEEECCCGGG
T ss_pred             ---cCCCCCEEEECCCH---------H---------------HHHHHHHHHhc---CCEEEEEeCCCC
Confidence               12479999999983         0               12344555554   489999998654

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=98.17  E-value=1.3e-05  Score=77.10  Aligned_cols=111  Identities=14%  Similarity=0.097  Sum_probs=76.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEE--ec--------CCChhhHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQ--VD--------LSSFQSVLK  127 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~--~D--------ls~~~~v~~  127 (365)
                      .|++|+|+||+|+||...+..+...|++|+++++++++++.+ +++     +....+-.  .|        .++.++.++
T Consensus       228 ~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~-~~l-----Ga~~vi~~~~~d~~~~~~~~~~~~~~~~~  301 (456)
T 3krt_A          228 QGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEIC-RAM-----GAEAIIDRNAEGYRFWKDENTQDPKEWKR  301 (456)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHH-----TCCEEEETTTTTCCSEEETTEECHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHH-Hhh-----CCcEEEecCcCcccccccccccchHHHHH
Confidence            489999999999999999999999999999999988877655 333     22211111  11        234556667


Q ss_pred             HHHHHHHHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017812          128 FKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  205 (365)
Q Consensus       128 ~~~~~~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~  205 (365)
                      +.+.+++..+    ..++|++|.++|..                        ..+..+..++.   .|++|.+++..+
T Consensus       302 ~~~~i~~~t~----g~g~Dvvid~~G~~------------------------~~~~~~~~l~~---~G~iv~~G~~~~  348 (456)
T 3krt_A          302 FGKRIRELTG----GEDIDIVFEHPGRE------------------------TFGASVFVTRK---GGTITTCASTSG  348 (456)
T ss_dssp             HHHHHHHHHT----SCCEEEEEECSCHH------------------------HHHHHHHHEEE---EEEEEESCCTTC
T ss_pred             HHHHHHHHhC----CCCCcEEEEcCCch------------------------hHHHHHHHhhC---CcEEEEEecCCC
Confidence            7777776432    24799999999840                        12334455544   589999987654

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=98.16  E-value=1.7e-05  Score=72.10  Aligned_cols=83  Identities=17%  Similarity=0.247  Sum_probs=61.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecC---chhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRS---SHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDS  131 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~---~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~  131 (365)
                      ++++|+++|+|+ ||+|++++..|++.|+ +|+++.|+   .++++++.+++.... +.  .+...++.+.+...   +.
T Consensus       145 ~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~-~~--~v~~~~~~~l~~~~---~~  217 (312)
T 3t4e_A          145 DMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENT-DC--VVTVTDLADQHAFT---EA  217 (312)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHS-SC--EEEEEETTCHHHHH---HH
T ss_pred             CcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhcc-Cc--ceEEechHhhhhhH---hh
Confidence            467999999998 8999999999999998 89999999   888888888887654 22  23344555543222   22


Q ss_pred             HHHHHhccCCCCCeeEEEecCCcc
Q 017812          132 LQQWLLDSDMHSSIQLLINNAGIL  155 (365)
Q Consensus       132 ~~~~~~~~~~~~~id~lv~nAG~~  155 (365)
                      +.+          .|++||+.++.
T Consensus       218 l~~----------~DiIINaTp~G  231 (312)
T 3t4e_A          218 LAS----------ADILTNGTKVG  231 (312)
T ss_dssp             HHH----------CSEEEECSSTT
T ss_pred             ccC----------ceEEEECCcCC
Confidence            222          79999987764

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=98.09  E-value=3.1e-05  Score=72.55  Aligned_cols=108  Identities=19%  Similarity=0.218  Sum_probs=73.4

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      .++.|++|+|+|+ |+||+++|+.+...|++|++++|++++++.+.+.+     +..+   .+|.++.+++.+.+   . 
T Consensus       164 ~~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~-----g~~~---~~~~~~~~~l~~~l---~-  230 (377)
T 2vhw_A          164 PGVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEF-----CGRI---HTRYSSAYELEGAV---K-  230 (377)
T ss_dssp             TTBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-----TTSS---EEEECCHHHHHHHH---H-
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhc-----CCee---EeccCCHHHHHHHH---c-
Confidence            3688999999999 99999999999999999999999998876655433     2222   23334444443332   2 


Q ss_pred             HHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017812          135 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  204 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~  204 (365)
                               ..|++|++++....  + ++              ..+.+..++.|++   .+.||++++..
T Consensus       231 ---------~aDvVi~~~~~p~~--~-t~--------------~li~~~~l~~mk~---g~~iV~va~~~  271 (377)
T 2vhw_A          231 ---------RADLVIGAVLVPGA--K-AP--------------KLVSNSLVAHMKP---GAVLVDIAIDQ  271 (377)
T ss_dssp             ---------HCSEEEECCCCTTS--C-CC--------------CCBCHHHHTTSCT---TCEEEEGGGGT
T ss_pred             ---------CCCEEEECCCcCCC--C-Cc--------------ceecHHHHhcCCC---CcEEEEEecCC
Confidence                     28999999986432  1 00              1123445566653   57999999643

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=98.06  E-value=3.3e-05  Score=71.44  Aligned_cols=100  Identities=15%  Similarity=0.206  Sum_probs=67.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .|++|+|+||+|+||..++..+...|++|+++ +++++++.+ +++     +...    +| .+ ++..+.+.+..    
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~-~~l-----Ga~~----i~-~~-~~~~~~~~~~~----  212 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYV-RDL-----GATP----ID-AS-REPEDYAAEHT----  212 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHH-HHH-----TSEE----EE-TT-SCHHHHHHHHH----
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHH-HHc-----CCCE----ec-cC-CCHHHHHHHHh----
Confidence            48899999999999999999999999999999 777775543 333     3322    45 33 23333333322    


Q ss_pred             ccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017812          138 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  204 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~  204 (365)
                         ...++|++|+++|..                        ..+..+..++.   .|++|.++...
T Consensus       213 ---~~~g~D~vid~~g~~------------------------~~~~~~~~l~~---~G~iv~~g~~~  249 (343)
T 3gaz_A          213 ---AGQGFDLVYDTLGGP------------------------VLDASFSAVKR---FGHVVSCLGWG  249 (343)
T ss_dssp             ---TTSCEEEEEESSCTH------------------------HHHHHHHHEEE---EEEEEESCCCS
T ss_pred             ---cCCCceEEEECCCcH------------------------HHHHHHHHHhc---CCeEEEEcccC
Confidence               234799999999831                        12344455544   48999987654

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=98.04  E-value=2.3e-05  Score=72.31  Aligned_cols=102  Identities=15%  Similarity=0.092  Sum_probs=70.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .|++|+|+|| ||||..++..+...|++|++++|++++++.+. ++     +..   ..+|.++.+ +.   +.+.+.  
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~l-----Ga~---~~~d~~~~~-~~---~~~~~~--  227 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK-EL-----GAD---LVVNPLKED-AA---KFMKEK--  227 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HT-----TCS---EEECTTTSC-HH---HHHHHH--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HC-----CCC---EEecCCCcc-HH---HHHHHH--
Confidence            4789999999 88999999999999999999999988876543 22     222   235766543 22   222221  


Q ss_pred             ccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017812          138 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  205 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~  205 (365)
                         . +++|++|+++|..        +               ..+..++.++.   .|++|.+++..+
T Consensus       228 ---~-~~~d~vid~~g~~--------~---------------~~~~~~~~l~~---~G~~v~~g~~~~  265 (339)
T 1rjw_A          228 ---V-GGVHAAVVTAVSK--------P---------------AFQSAYNSIRR---GGACVLVGLPPE  265 (339)
T ss_dssp             ---H-SSEEEEEESSCCH--------H---------------HHHHHHHHEEE---EEEEEECCCCSS
T ss_pred             ---h-CCCCEEEECCCCH--------H---------------HHHHHHHHhhc---CCEEEEecccCC
Confidence               1 4699999999951        1               23445555554   489999987653

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=98.02  E-value=1.1e-05  Score=72.19  Aligned_cols=76  Identities=17%  Similarity=0.223  Sum_probs=57.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++.+++....   .+.  ..|+   +++.         
T Consensus       116 ~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~---~~~--~~~~---~~~~---------  177 (272)
T 1p77_A          116 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYG---NIQ--AVSM---DSIP---------  177 (272)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGS---CEE--EEEG---GGCC---------
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccC---CeE--EeeH---HHhc---------
Confidence            367899999998 799999999999999999999999999888887774421   222  2333   1110         


Q ss_pred             HhccCCCCCeeEEEecCCcc
Q 017812          136 LLDSDMHSSIQLLINNAGIL  155 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~  155 (365)
                           . +..|++||+++..
T Consensus       178 -----~-~~~DivIn~t~~~  191 (272)
T 1p77_A          178 -----L-QTYDLVINATSAG  191 (272)
T ss_dssp             -----C-SCCSEEEECCCC-
T ss_pred             -----c-CCCCEEEECCCCC
Confidence                 0 3699999999974

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.99  E-value=2.9e-05  Score=72.49  Aligned_cols=99  Identities=17%  Similarity=0.168  Sum_probs=69.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .|++|+|+|+ |+||..++..+...|++|+++++++++.+.+.+++     +..   ..+|..+.+.+       .+   
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~l-----Ga~---~v~~~~~~~~~-------~~---  247 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNF-----GAD---SFLVSRDQEQM-------QA---  247 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTS-----CCS---EEEETTCHHHH-------HH---
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----CCc---eEEeccCHHHH-------HH---
Confidence            4889999996 99999999999999999999999998876654333     322   12465554322       22   


Q ss_pred             ccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017812          138 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  204 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~  204 (365)
                         ..+++|++|+++|...                       .++..++.++.   .|++|.+++..
T Consensus       248 ---~~~~~D~vid~~g~~~-----------------------~~~~~~~~l~~---~G~iv~~g~~~  285 (366)
T 1yqd_A          248 ---AAGTLDGIIDTVSAVH-----------------------PLLPLFGLLKS---HGKLILVGAPE  285 (366)
T ss_dssp             ---TTTCEEEEEECCSSCC-----------------------CSHHHHHHEEE---EEEEEECCCCS
T ss_pred             ---hhCCCCEEEECCCcHH-----------------------HHHHHHHHHhc---CCEEEEEccCC
Confidence               2247999999999521                       12234455544   48999998865

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=97.96  E-value=6.8e-05  Score=60.65  Aligned_cols=77  Identities=13%  Similarity=0.129  Sum_probs=57.9

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCc-hhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS-HLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      ++.++|.|+ |.+|+.+++.|.+.|++|+++++++ ++.+.+.+..     ...+.++..|.++++.+.+.         
T Consensus         3 ~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~-----~~~~~~i~gd~~~~~~l~~a---------   67 (153)
T 1id1_A            3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL-----GDNADVIPGDSNDSSVLKKA---------   67 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH-----CTTCEEEESCTTSHHHHHHH---------
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh-----cCCCeEEEcCCCCHHHHHHc---------
Confidence            467888986 9999999999999999999999984 5554444332     22467889999998765442         


Q ss_pred             ccCCCCCeeEEEecCC
Q 017812          138 DSDMHSSIQLLINNAG  153 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG  153 (365)
                         .....|.+|...+
T Consensus        68 ---~i~~ad~vi~~~~   80 (153)
T 1id1_A           68 ---GIDRCRAILALSD   80 (153)
T ss_dssp             ---TTTTCSEEEECSS
T ss_pred             ---ChhhCCEEEEecC
Confidence               1245888887776

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.94  E-value=3e-05  Score=72.22  Aligned_cols=108  Identities=20%  Similarity=0.195  Sum_probs=71.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      .+++++|+|+|+ ||+|+++++.+...|++|++++|++++++.+.+....     .+..   +..+.+++.+   .+.  
T Consensus       164 ~l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~-----~~~~---~~~~~~~~~~---~~~--  229 (361)
T 1pjc_A          164 GVKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS-----RVEL---LYSNSAEIET---AVA--  229 (361)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG-----GSEE---EECCHHHHHH---HHH--
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCc-----eeEe---eeCCHHHHHH---HHc--
Confidence            467899999999 9999999999999999999999999988776554321     2212   2223333322   222  


Q ss_pred             HhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017812          136 LLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  205 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~  205 (365)
                              ..|++|+++|.......                 ..+.+..++.|++   .++|+.+++..+
T Consensus       230 --------~~DvVI~~~~~~~~~~~-----------------~li~~~~~~~~~~---g~~ivdv~~~~g  271 (361)
T 1pjc_A          230 --------EADLLIGAVLVPGRRAP-----------------ILVPASLVEQMRT---GSVIVDVAVDQG  271 (361)
T ss_dssp             --------TCSEEEECCCCTTSSCC-----------------CCBCHHHHTTSCT---TCEEEETTCTTC
T ss_pred             --------CCCEEEECCCcCCCCCC-----------------eecCHHHHhhCCC---CCEEEEEecCCC
Confidence                    48999999987431100                 0112233445543   479999988653

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.89  E-value=3e-05  Score=68.31  Aligned_cols=82  Identities=17%  Similarity=0.293  Sum_probs=65.9

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCc-------------------hhHHHHHHHHHhhcCCCceEEEE
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSS-------------------HLLSETMADITSRNKDARLEAFQ  116 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~  116 (365)
                      +++++|+|.|+ ||+|.++|+.|++.|. +|++++++.                   .+.+.+.+.+.+.+|..++..+.
T Consensus        29 l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~  107 (249)
T 1jw9_B           29 LKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVN  107 (249)
T ss_dssp             HHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred             HhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEe
Confidence            56789999997 7999999999999997 999999998                   88999999998888877787777


Q ss_pred             ecCCChhhHHHHHHHHHHHHhccCCCCCeeEEEecCC
Q 017812          117 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAG  153 (365)
Q Consensus       117 ~Dls~~~~v~~~~~~~~~~~~~~~~~~~id~lv~nAG  153 (365)
                      .++++ +++.+++             ...|++|.+.+
T Consensus       108 ~~~~~-~~~~~~~-------------~~~DvVi~~~d  130 (249)
T 1jw9_B          108 ALLDD-AELAALI-------------AEHDLVLDCTD  130 (249)
T ss_dssp             SCCCH-HHHHHHH-------------HTSSEEEECCS
T ss_pred             ccCCH-hHHHHHH-------------hCCCEEEEeCC
Confidence            77763 3333322             23899998765

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=97.88  E-value=7.6e-05  Score=58.97  Aligned_cols=75  Identities=17%  Similarity=0.234  Sum_probs=55.6

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhc
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  138 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~  138 (365)
                      ++.++|+|+ |.+|..+++.|.+.|++|++++|++++.+.+.+.    .   .+.++..|.++.+.+.+.          
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~----~---~~~~~~~d~~~~~~l~~~----------   65 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE----I---DALVINGDCTKIKTLEDA----------   65 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----C---SSEEEESCTTSHHHHHHT----------
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHh----c---CcEEEEcCCCCHHHHHHc----------
Confidence            457899987 9999999999999999999999998776554322    1   345677888886654321          


Q ss_pred             cCCCCCeeEEEecCC
Q 017812          139 SDMHSSIQLLINNAG  153 (365)
Q Consensus       139 ~~~~~~id~lv~nAG  153 (365)
                        .....|++|.+.+
T Consensus        66 --~~~~~d~vi~~~~   78 (140)
T 1lss_A           66 --GIEDADMYIAVTG   78 (140)
T ss_dssp             --TTTTCSEEEECCS
T ss_pred             --CcccCCEEEEeeC
Confidence              1246899999875

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.87  E-value=7e-05  Score=69.33  Aligned_cols=103  Identities=13%  Similarity=0.145  Sum_probs=69.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      .|++|+|+|| |+||..++..+...|+ +|+++++++++++.+. ++     +..   ...|..+.+ +.   +++.+..
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~-~~-----Ga~---~~~~~~~~~-~~---~~v~~~~  232 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAK-KV-----GAD---YVINPFEED-VV---KEVMDIT  232 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHH-HH-----TCS---EEECTTTSC-HH---HHHHHHT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh-----CCC---EEECCCCcC-HH---HHHHHHc
Confidence            5789999999 9999999999999999 9999999988765543 33     222   124555432 22   2233211


Q ss_pred             hccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017812          137 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  204 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~  204 (365)
                          ...++|++|+++|..                       ...+.+++.++.   .|++|.+++..
T Consensus       233 ----~g~g~D~vid~~g~~-----------------------~~~~~~~~~l~~---~G~iv~~g~~~  270 (348)
T 2d8a_A          233 ----DGNGVDVFLEFSGAP-----------------------KALEQGLQAVTP---AGRVSLLGLYP  270 (348)
T ss_dssp             ----TTSCEEEEEECSCCH-----------------------HHHHHHHHHEEE---EEEEEECCCCS
T ss_pred             ----CCCCCCEEEECCCCH-----------------------HHHHHHHHHHhc---CCEEEEEccCC
Confidence                123699999999941                       123445566554   48999998754

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=97.84  E-value=0.00022  Score=65.28  Aligned_cols=117  Identities=16%  Similarity=0.130  Sum_probs=74.0

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCC--CEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           60 PVCIVTGATSGLGAAAAYALSREG--FHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G--~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      ..++||||+|.+|..++..|+.+|  .+|++++++++  +....++.......++..    +++.++..+.+        
T Consensus         9 mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~--~~~~~dL~~~~~~~~v~~----~~~t~d~~~al--------   74 (326)
T 1smk_A            9 FKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA--PGVTADISHMDTGAVVRG----FLGQQQLEAAL--------   74 (326)
T ss_dssp             EEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH--HHHHHHHHTSCSSCEEEE----EESHHHHHHHH--------
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc--HhHHHHhhcccccceEEE----EeCCCCHHHHc--------
Confidence            469999999999999999999999  68999998876  333334443211112222    22222332222        


Q ss_pred             ccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCC
Q 017812          138 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSF  203 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~  203 (365)
                           ...|++|+.||..... ..+.   .+.+.+|+-+...+.+.+...-.    .+.|+++|..
T Consensus        75 -----~gaDvVi~~ag~~~~~-g~~r---~dl~~~N~~~~~~i~~~i~~~~p----~~~viv~SNP  127 (326)
T 1smk_A           75 -----TGMDLIIVPAGVPRKP-GMTR---DDLFKINAGIVKTLCEGIAKCCP----RAIVNLISNP  127 (326)
T ss_dssp             -----TTCSEEEECCCCCCCS-SCCC---SHHHHHHHHHHHHHHHHHHHHCT----TSEEEECCSS
T ss_pred             -----CCCCEEEEcCCcCCCC-CCCH---HHHHHHHHHHHHHHHHHHHhhCC----CeEEEEECCc
Confidence                 3489999999975322 1222   24588899888888887766531    3455554433

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.83  E-value=2.8e-05  Score=70.33  Aligned_cols=46  Identities=13%  Similarity=0.177  Sum_probs=41.6

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADI  103 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l  103 (365)
                      +++++++|+|+ ||+|++++..|++.|+ +|++++|+.++++++.+++
T Consensus       139 l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~  185 (297)
T 2egg_A          139 LDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREG  185 (297)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHS
T ss_pred             CCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHh
Confidence            67899999998 7999999999999998 9999999999888777665

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=97.82  E-value=0.00013  Score=65.48  Aligned_cols=95  Identities=16%  Similarity=0.310  Sum_probs=75.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCc------------------hhHHHHHHHHHhhcCCCceEEEE
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSS------------------HLLSETMADITSRNKDARLEAFQ  116 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~------------------~~~~~~~~~l~~~~~~~~~~~~~  116 (365)
                      .+++.+|+|.|+ ||+|.++++.|++.|. ++.+++++.                  .|.+.+.+.+.+.+|..++..+.
T Consensus        33 kL~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~~  111 (292)
T 3h8v_A           33 KIRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHN  111 (292)
T ss_dssp             GGGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred             HHhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEec
Confidence            367889999987 7899999999999997 999999886                  78888999999999999999999


Q ss_pred             ecCCChhhHHHHHHHHHHHHhccCCCCCeeEEEecCC
Q 017812          117 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAG  153 (365)
Q Consensus       117 ~Dls~~~~v~~~~~~~~~~~~~~~~~~~id~lv~nAG  153 (365)
                      .++++.+.+..+++.+...  ........|++|.+..
T Consensus       112 ~~l~~~~~~~~~~~~~~~~--~l~~~~~~DlVid~~D  146 (292)
T 3h8v_A          112 YNITTVENFQHFMDRISNG--GLEEGKPVDLVLSCVD  146 (292)
T ss_dssp             CCTTSHHHHHHHHHHHHHB--SSSTTBCCSEEEECCS
T ss_pred             ccCCcHHHHHHHhhhhccc--ccccCCCCCEEEECCc
Confidence            9998877777776654321  0000136899986654

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=97.80  E-value=0.00055  Score=61.99  Aligned_cols=116  Identities=18%  Similarity=0.123  Sum_probs=75.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHCCC--EEEEEec--CchhHHHHHHHHHhhcC-CCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           61 VCIVTGATSGLGAAAAYALSREGF--HVVLVGR--SSHLLSETMADITSRNK-DARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G~--~Vil~~r--~~~~~~~~~~~l~~~~~-~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      .++||||+|.+|..++..|+..|.  ++++.++  ++++++....++..... ...+.+.. |  +.+.           
T Consensus         2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~~~a-----------   67 (303)
T 1o6z_A            2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--GYED-----------   67 (303)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--CGGG-----------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--CHHH-----------
Confidence            589999999999999999999885  7999999  87766655555544311 12233332 2  2222           


Q ss_pred             HhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017812          136 LLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  204 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~  204 (365)
                            ....|++|+.||+.... ..+.   .+.+.+|+-+...+.+.+..+    ...+.|+++|...
T Consensus        68 ------~~~aDvVi~~ag~~~~~-g~~r---~dl~~~N~~i~~~i~~~i~~~----~p~~~viv~SNPv  122 (303)
T 1o6z_A           68 ------TAGSDVVVITAGIPRQP-GQTR---IDLAGDNAPIMEDIQSSLDEH----NDDYISLTTSNPV  122 (303)
T ss_dssp             ------GTTCSEEEECCCCCCCT-TCCH---HHHHHHHHHHHHHHHHHHHTT----CSCCEEEECCSSH
T ss_pred             ------hCCCCEEEEcCCCCCCC-CCCH---HHHHHHHHHHHHHHHHHHHHH----CCCcEEEEeCChH
Confidence                  13599999999975322 2233   345788888888777777554    2235565554433

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.80  E-value=4.7e-05  Score=68.98  Aligned_cols=98  Identities=16%  Similarity=0.195  Sum_probs=63.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .|++|+|+||+||+|..++..+...|++|+++++++++.+.+. ++     +..   ..+|..+.+   .+.+.+     
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~-----ga~---~~~~~~~~~---~~~~~~-----  187 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL-AL-----GAE---EAATYAEVP---ERAKAW-----  187 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH-HT-----TCS---EEEEGGGHH---HHHHHT-----
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hc-----CCC---EEEECCcch---hHHHHh-----
Confidence            4789999999999999999999999999999999988876543 22     222   124544411   122211     


Q ss_pred             ccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017812          138 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  205 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~  205 (365)
                           +++|++|+ +|.  .                      ..+..++.++.   .|++|.++...+
T Consensus       188 -----~~~d~vid-~g~--~----------------------~~~~~~~~l~~---~G~~v~~g~~~~  222 (302)
T 1iz0_A          188 -----GGLDLVLE-VRG--K----------------------EVEESLGLLAH---GGRLVYIGAAEG  222 (302)
T ss_dssp             -----TSEEEEEE-CSC--T----------------------THHHHHTTEEE---EEEEEEC-----
T ss_pred             -----cCceEEEE-CCH--H----------------------HHHHHHHhhcc---CCEEEEEeCCCC
Confidence                 46999999 884  1                      02334555544   489999887543

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=97.79  E-value=0.00016  Score=66.98  Aligned_cols=104  Identities=14%  Similarity=0.146  Sum_probs=66.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCC-hhhHHHHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSS-FQSVLKFKDSLQQWL  136 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~-~~~v~~~~~~~~~~~  136 (365)
                      .|++|+|+|+ |++|...+..+...|++|+++++++++++.+. ++     +.. .  .+|.++ .+..+++.+..... 
T Consensus       168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~l-----Ga~-~--~~~~~~~~~~~~~i~~~~~~~-  236 (352)
T 1e3j_A          168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK-NC-----GAD-V--TLVVDPAKEEESSIIERIRSA-  236 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HT-----TCS-E--EEECCTTTSCHHHHHHHHHHH-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-Hh-----CCC-E--EEcCcccccHHHHHHHHhccc-
Confidence            4789999997 89999999988889999999999988765543 22     322 2  234443 33233322211100 


Q ss_pred             hccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcC
Q 017812          137 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS  202 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS  202 (365)
                          ..+++|++|+++|..        .               ..+..++.++.   .|++|.++.
T Consensus       237 ----~g~g~D~vid~~g~~--------~---------------~~~~~~~~l~~---~G~iv~~G~  272 (352)
T 1e3j_A          237 ----IGDLPNVTIDCSGNE--------K---------------CITIGINITRT---GGTLMLVGM  272 (352)
T ss_dssp             ----SSSCCSEEEECSCCH--------H---------------HHHHHHHHSCT---TCEEEECSC
T ss_pred             ----cCCCCCEEEECCCCH--------H---------------HHHHHHHHHhc---CCEEEEEec
Confidence                024699999999851        1               22334455543   589999876

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=97.77  E-value=0.00017  Score=67.16  Aligned_cols=103  Identities=15%  Similarity=0.109  Sum_probs=69.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .|++|+|+| +|+||...+..+...|++|+++++++++++.+ +++     +...   .+| .+.+++.+.+.++.    
T Consensus       189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~l-----Ga~~---vi~-~~~~~~~~~v~~~~----  253 (363)
T 3uog_A          189 AGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRA-FAL-----GADH---GIN-RLEEDWVERVYALT----  253 (363)
T ss_dssp             TTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHH-----TCSE---EEE-TTTSCHHHHHHHHH----
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHH-HHc-----CCCE---EEc-CCcccHHHHHHHHh----
Confidence            488999999 89999999999999999999999998877654 333     3221   234 44334433333332    


Q ss_pred             ccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017812          138 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  205 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~  205 (365)
                         ...++|+++.++|.  .                      ..+..+..++.   .|++|.++...+
T Consensus       254 ---~g~g~D~vid~~g~--~----------------------~~~~~~~~l~~---~G~iv~~G~~~~  291 (363)
T 3uog_A          254 ---GDRGADHILEIAGG--A----------------------GLGQSLKAVAP---DGRISVIGVLEG  291 (363)
T ss_dssp             ---TTCCEEEEEEETTS--S----------------------CHHHHHHHEEE---EEEEEEECCCSS
T ss_pred             ---CCCCceEEEECCCh--H----------------------HHHHHHHHhhc---CCEEEEEecCCC
Confidence               22479999999993  1                      02234445544   589999987654

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=97.76  E-value=0.00036  Score=64.82  Aligned_cols=107  Identities=10%  Similarity=0.080  Sum_probs=71.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCE-EEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFH-VVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~-Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      .|++|+|+|+ |++|...+......|++ |+++++++++++.+. ++ .    ..+..+..|-.+.+++   .+++++..
T Consensus       179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l-~----~~~~~~~~~~~~~~~~---~~~v~~~t  248 (363)
T 3m6i_A          179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAK-EI-C----PEVVTHKVERLSAEES---AKKIVESF  248 (363)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHH-HH-C----TTCEEEECCSCCHHHH---HHHHHHHT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh-c----hhcccccccccchHHH---HHHHHHHh
Confidence            4789999998 99999999888889997 999999988876544 33 2    2344455554444444   33444322


Q ss_pred             hccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017812          137 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  204 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~  204 (365)
                          ...++|+++.++|..        .               ..+..++.++.   .|++|.++...
T Consensus       249 ----~g~g~Dvvid~~g~~--------~---------------~~~~~~~~l~~---~G~iv~~G~~~  286 (363)
T 3m6i_A          249 ----GGIEPAVALECTGVE--------S---------------SIAAAIWAVKF---GGKVFVIGVGK  286 (363)
T ss_dssp             ----SSCCCSEEEECSCCH--------H---------------HHHHHHHHSCT---TCEEEECCCCC
T ss_pred             ----CCCCCCEEEECCCCh--------H---------------HHHHHHHHhcC---CCEEEEEccCC
Confidence                234799999999851        1               22334445443   58999998644

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.75  E-value=0.00014  Score=68.06  Aligned_cols=76  Identities=20%  Similarity=0.250  Sum_probs=52.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .|++|+|+||+|+||..++..+...|++|++++ +.++.+.+ +++     +..   ..+|..+.+-    .+++.+   
T Consensus       183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~-~~l-----Ga~---~v~~~~~~~~----~~~~~~---  245 (375)
T 2vn8_A          183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELV-RKL-----GAD---DVIDYKSGSV----EEQLKS---  245 (375)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHH-HHT-----TCS---EEEETTSSCH----HHHHHT---
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHH-HHc-----CCC---EEEECCchHH----HHHHhh---
Confidence            489999999999999999999889999999988 45554433 332     222   1235554332    223332   


Q ss_pred             ccCCCCCeeEEEecCCc
Q 017812          138 DSDMHSSIQLLINNAGI  154 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~  154 (365)
                          .+++|++|+++|.
T Consensus       246 ----~~g~D~vid~~g~  258 (375)
T 2vn8_A          246 ----LKPFDFILDNVGG  258 (375)
T ss_dssp             ----SCCBSEEEESSCT
T ss_pred             ----cCCCCEEEECCCC
Confidence                2579999999995

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=97.71  E-value=0.00047  Score=62.76  Aligned_cols=156  Identities=19%  Similarity=0.271  Sum_probs=95.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHCCC--EEEEEec--CchhHHHHHHHHHhhcC--CCceEEEEecCCChhhHHHHHHHHHH
Q 017812           61 VCIVTGATSGLGAAAAYALSREGF--HVVLVGR--SSHLLSETMADITSRNK--DARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G~--~Vil~~r--~~~~~~~~~~~l~~~~~--~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      .|+||||+|.+|..++..|+.+|.  .++++++  ++++++....++....+  +.++.+...|    +++.+       
T Consensus         2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~----d~l~~-------   70 (313)
T 1hye_A            2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES----DENLR-------   70 (313)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE----TTCGG-------
T ss_pred             EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC----cchHH-------
Confidence            589999999999999999999885  6899998  76666554445543211  1122222211    11111       


Q ss_pred             HHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017812          135 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  214 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~  214 (365)
                            .....|++|+.||+.... ..+.   .+.+++|+-+...+++.+..+-     .+.|+++|.......+-.   
T Consensus        71 ------al~gaD~Vi~~Ag~~~~~-g~~r---~dl~~~N~~i~~~i~~~i~~~~-----~~~vlv~SNPv~~~t~~~---  132 (313)
T 1hye_A           71 ------IIDESDVVIITSGVPRKE-GMSR---MDLAKTNAKIVGKYAKKIAEIC-----DTKIFVITNPVDVMTYKA---  132 (313)
T ss_dssp             ------GGTTCSEEEECCSCCCCT-TCCH---HHHHHHHHHHHHHHHHHHHHHC-----CCEEEECSSSHHHHHHHH---
T ss_pred             ------HhCCCCEEEECCCCCCCC-CCcH---HHHHHHHHHHHHHHHHHHHHhC-----CeEEEEecCcHHHHHHHH---
Confidence                  124599999999975322 2232   3458899999888888886653     256766666543311100   


Q ss_pred             CccccccccccCCCCChhhhhhh-hHHHHHHHHHHHHHHhC
Q 017812          215 NETITGKFFLRSKCYPCARIYEY-SKLCLLIFSYELHRNLG  254 (365)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~~-sK~a~~~~~~~la~e~~  254 (365)
                               ....++|....++. +..-...+...+++.+.
T Consensus       133 ---------~k~~~~p~~rviG~gt~LD~~r~~~~la~~lg  164 (313)
T 1hye_A          133 ---------LVDSKFERNQVFGLGTHLDSLRFKVAIAKFFG  164 (313)
T ss_dssp             ---------HHHHCCCTTSEEECTTHHHHHHHHHHHHHHHT
T ss_pred             ---------HHhhCcChhcEEEeCccHHHHHHHHHHHHHhC
Confidence                     00023444556666 66656666777777765

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.67  E-value=0.00019  Score=66.25  Aligned_cols=78  Identities=10%  Similarity=0.164  Sum_probs=56.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .|++|+|+||+|+||...+..+...|++|+++++++++++.+.+ +     +..   ..+|..+  +   +.+.+.+.  
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-l-----Ga~---~vi~~~~--~---~~~~~~~~--  213 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKK-M-----GAD---IVLNHKE--S---LLNQFKTQ--  213 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHH-H-----TCS---EEECTTS--C---HHHHHHHH--
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c-----CCc---EEEECCc--c---HHHHHHHh--
Confidence            48999999999999999999999999999999999887765543 3     222   1234332  2   22333332  


Q ss_pred             ccCCCCCeeEEEecCCc
Q 017812          138 DSDMHSSIQLLINNAGI  154 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~  154 (365)
                         ..+++|++++++|.
T Consensus       214 ---~~~g~Dvv~d~~g~  227 (346)
T 3fbg_A          214 ---GIELVDYVFCTFNT  227 (346)
T ss_dssp             ---TCCCEEEEEESSCH
T ss_pred             ---CCCCccEEEECCCc
Confidence               23579999999984

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=97.67  E-value=5e-05  Score=69.63  Aligned_cols=75  Identities=19%  Similarity=0.177  Sum_probs=50.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhccC
Q 017812           61 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  140 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~~  140 (365)
                      +|+|+||+||+|...+..+...|++|+++++++++++.+. ++     +...   .+|..+.+  .+.++++        
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~-~l-----Ga~~---~i~~~~~~--~~~~~~~--------  212 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR-VL-----GAKE---VLAREDVM--AERIRPL--------  212 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH-HT-----TCSE---EEECC-----------C--------
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-Hc-----CCcE---EEecCCcH--HHHHHHh--------
Confidence            7999999999999999999899999999999988776553 22     3221   23544432  1111111        


Q ss_pred             CCCCeeEEEecCCc
Q 017812          141 MHSSIQLLINNAGI  154 (365)
Q Consensus       141 ~~~~id~lv~nAG~  154 (365)
                      ..+++|++|+++|.
T Consensus       213 ~~~~~d~vid~~g~  226 (328)
T 1xa0_A          213 DKQRWAAAVDPVGG  226 (328)
T ss_dssp             CSCCEEEEEECSTT
T ss_pred             cCCcccEEEECCcH
Confidence            22479999999984

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=97.65  E-value=0.00039  Score=64.88  Aligned_cols=103  Identities=14%  Similarity=0.143  Sum_probs=69.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCCh-hhHHHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF-QSVLKFKDSLQQW  135 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~-~~v~~~~~~~~~~  135 (365)
                      .|++|+|+|+ |+||...+..+...|+ +|+++++++++++.+. ++     +..   ..+|.++. +++.+.+.++.  
T Consensus       192 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~l-----Ga~---~vi~~~~~~~~~~~~~~~~~--  259 (374)
T 1cdo_A          192 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK-VF-----GAT---DFVNPNDHSEPISQVLSKMT--  259 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT-----TCC---EEECGGGCSSCHHHHHHHHH--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-Hh-----CCc---eEEeccccchhHHHHHHHHh--
Confidence            4789999996 9999999998888999 8999999998876543 22     322   12455431 23444333332  


Q ss_pred             HhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCC-CeEEEEcCCc
Q 017812          136 LLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVP-SRIVNVTSFT  204 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~-g~iV~vsS~~  204 (365)
                            .+++|++|+++|..                       ...+..++.++.   . |++|.++...
T Consensus       260 ------~~g~D~vid~~g~~-----------------------~~~~~~~~~l~~---~~G~iv~~G~~~  297 (374)
T 1cdo_A          260 ------NGGVDFSLECVGNV-----------------------GVMRNALESCLK---GWGVSVLVGWTD  297 (374)
T ss_dssp             ------TSCBSEEEECSCCH-----------------------HHHHHHHHTBCT---TTCEEEECSCCS
T ss_pred             ------CCCCCEEEECCCCH-----------------------HHHHHHHHHhhc---CCcEEEEEcCCC
Confidence                  24799999999851                       123444555543   5 8999998754

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.62  E-value=0.00013  Score=67.94  Aligned_cols=75  Identities=21%  Similarity=0.319  Sum_probs=56.0

Q ss_pred             CCCCC--EEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHH
Q 017812           56 GIKRP--VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  133 (365)
Q Consensus        56 ~~~~k--~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~  133 (365)
                      +++|+  .|+|.|| |++|+.+|+.|++ ..+|.+++|+.++++++.         ..+..+.+|++|.+++.++++   
T Consensus        11 ~~~g~~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~---------~~~~~~~~d~~d~~~l~~~~~---   76 (365)
T 3abi_A           11 HIEGRHMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVK---------EFATPLKVDASNFDKLVEVMK---   76 (365)
T ss_dssp             -----CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHT---------TTSEEEECCTTCHHHHHHHHT---
T ss_pred             cccCCccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHh---------ccCCcEEEecCCHHHHHHHHh---
Confidence            45544  5888898 9999999999975 589999999988766542         245678899999888776643   


Q ss_pred             HHHhccCCCCCeeEEEecCCc
Q 017812          134 QWLLDSDMHSSIQLLINNAGI  154 (365)
Q Consensus       134 ~~~~~~~~~~~id~lv~nAG~  154 (365)
                                ..|+||++++.
T Consensus        77 ----------~~DvVi~~~p~   87 (365)
T 3abi_A           77 ----------EFELVIGALPG   87 (365)
T ss_dssp             ----------TCSEEEECCCG
T ss_pred             ----------CCCEEEEecCC
Confidence                      37999999875

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.58  E-value=0.00023  Score=59.23  Aligned_cols=78  Identities=10%  Similarity=0.054  Sum_probs=57.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHC-CCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSRE-GFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~-G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      ++.++.++|.|+ |.+|..+|+.|.+. |++|+++++++++.+.+.    +.    .+.++..|.++.+.+.++     .
T Consensus        36 ~~~~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~----~~----g~~~~~gd~~~~~~l~~~-----~  101 (183)
T 3c85_A           36 NPGHAQVLILGM-GRIGTGAYDELRARYGKISLGIEIREEAAQQHR----SE----GRNVISGDATDPDFWERI-----L  101 (183)
T ss_dssp             CCTTCSEEEECC-SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHH----HT----TCCEEECCTTCHHHHHTB-----C
T ss_pred             CCCCCcEEEECC-CHHHHHHHHHHHhccCCeEEEEECCHHHHHHHH----HC----CCCEEEcCCCCHHHHHhc-----c
Confidence            456777888985 99999999999999 999999999988765543    22    245677899887644321     0


Q ss_pred             HHhccCCCCCeeEEEecCC
Q 017812          135 WLLDSDMHSSIQLLINNAG  153 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG  153 (365)
                            .....|++|.+.+
T Consensus       102 ------~~~~ad~vi~~~~  114 (183)
T 3c85_A          102 ------DTGHVKLVLLAMP  114 (183)
T ss_dssp             ------SCCCCCEEEECCS
T ss_pred             ------CCCCCCEEEEeCC
Confidence                  1245899998766

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=97.58  E-value=0.00058  Score=62.83  Aligned_cols=101  Identities=14%  Similarity=0.136  Sum_probs=67.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .|++|+|+|+ |++|...+..+...|++|+++++++++.+.+. ++     +...   ..|..+.+..+.+. + .    
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~l-----Ga~~---~i~~~~~~~~~~~~-~-~----  229 (340)
T 3s2e_A          166 PGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLAR-RL-----GAEV---AVNARDTDPAAWLQ-K-E----  229 (340)
T ss_dssp             TTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HT-----TCSE---EEETTTSCHHHHHH-H-H----
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-Hc-----CCCE---EEeCCCcCHHHHHH-H-h----
Confidence            4889999997 89999999988899999999999988776442 22     3222   24555543332222 2 1    


Q ss_pred             ccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017812          138 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  204 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~  204 (365)
                          .+++|++|.++|.        .+               ..+.+++.++.   .|+++.++...
T Consensus       230 ----~g~~d~vid~~g~--------~~---------------~~~~~~~~l~~---~G~iv~~G~~~  266 (340)
T 3s2e_A          230 ----IGGAHGVLVTAVS--------PK---------------AFSQAIGMVRR---GGTIALNGLPP  266 (340)
T ss_dssp             ----HSSEEEEEESSCC--------HH---------------HHHHHHHHEEE---EEEEEECSCCS
T ss_pred             ----CCCCCEEEEeCCC--------HH---------------HHHHHHHHhcc---CCEEEEeCCCC
Confidence                1479999999884        11               23344455544   58999988654

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=97.57  E-value=0.00033  Score=61.68  Aligned_cols=82  Identities=21%  Similarity=0.318  Sum_probs=63.5

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCc-------------------hhHHHHHHHHHhhcCCCceEEEE
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSS-------------------HLLSETMADITSRNKDARLEAFQ  116 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~  116 (365)
                      +++++|+|.|+ ||+|.++++.|+..|. ++.+++++.                   .+.+.+.+.+.+.+|..++..+.
T Consensus        26 l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~  104 (251)
T 1zud_1           26 LLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQ  104 (251)
T ss_dssp             HHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred             HhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEe
Confidence            56789999998 6799999999999997 899987653                   67888889998888888888777


Q ss_pred             ecCCChhhHHHHHHHHHHHHhccCCCCCeeEEEecCC
Q 017812          117 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAG  153 (365)
Q Consensus       117 ~Dls~~~~v~~~~~~~~~~~~~~~~~~~id~lv~nAG  153 (365)
                      .+++. +.+.++++             ..|++|++..
T Consensus       105 ~~~~~-~~~~~~~~-------------~~DvVi~~~d  127 (251)
T 1zud_1          105 QRLTG-EALKDAVA-------------RADVVLDCTD  127 (251)
T ss_dssp             SCCCH-HHHHHHHH-------------HCSEEEECCS
T ss_pred             ccCCH-HHHHHHHh-------------cCCEEEECCC
Confidence            66654 33333322             2799997754

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=97.56  E-value=0.00065  Score=63.31  Aligned_cols=103  Identities=15%  Similarity=0.189  Sum_probs=68.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCCh-hhHHHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF-QSVLKFKDSLQQW  135 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~-~~v~~~~~~~~~~  135 (365)
                      .|++|+|+|+ |+||...+..+...|+ +|+++++++++++.+. ++     +..   ..+|.++. +++.+.+.++   
T Consensus       190 ~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~-~l-----Ga~---~vi~~~~~~~~~~~~v~~~---  256 (373)
T 2fzw_A          190 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAK-EF-----GAT---ECINPQDFSKPIQEVLIEM---  256 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HH-----TCS---EEECGGGCSSCHHHHHHHH---
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hc-----CCc---eEeccccccccHHHHHHHH---
Confidence            4789999996 9999999988888999 8999999998876543 33     322   12354431 2333333322   


Q ss_pred             HhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCC-CeEEEEcCCc
Q 017812          136 LLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVP-SRIVNVTSFT  204 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~-g~iV~vsS~~  204 (365)
                           ..+++|++|.++|..                       ...+..+..++.   . |++|.++...
T Consensus       257 -----~~~g~D~vid~~g~~-----------------------~~~~~~~~~l~~---~~G~iv~~G~~~  295 (373)
T 2fzw_A          257 -----TDGGVDYSFECIGNV-----------------------KVMRAALEACHK---GWGVSVVVGVAA  295 (373)
T ss_dssp             -----TTSCBSEEEECSCCH-----------------------HHHHHHHHTBCT---TTCEEEECSCCC
T ss_pred             -----hCCCCCEEEECCCcH-----------------------HHHHHHHHhhcc---CCcEEEEEecCC
Confidence                 224799999999851                       113344555544   5 8999998654

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=97.56  E-value=0.00057  Score=63.45  Aligned_cols=87  Identities=21%  Similarity=0.255  Sum_probs=53.1

Q ss_pred             CC-CEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCCh--hhHHHHHHHHHH
Q 017812           58 KR-PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF--QSVLKFKDSLQQ  134 (365)
Q Consensus        58 ~~-k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~--~~v~~~~~~~~~  134 (365)
                      .| ++|+|+||+|++|...+..+...|++|+.++++.+++++..+.+++.  +... +  +|..+.  ++   +.+++.+
T Consensus       166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~l--Ga~~-v--i~~~~~~~~~---~~~~i~~  237 (364)
T 1gu7_A          166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKEL--GATQ-V--ITEDQNNSRE---FGPTIKE  237 (364)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHH--TCSE-E--EEHHHHHCGG---GHHHHHH
T ss_pred             CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhc--CCeE-E--EecCccchHH---HHHHHHH
Confidence            37 89999999999999998888888999999998776533322333333  3221 2  222220  12   2223332


Q ss_pred             HHhccCCCCCeeEEEecCCc
Q 017812          135 WLLDSDMHSSIQLLINNAGI  154 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~  154 (365)
                      ....  ..+++|++|.++|.
T Consensus       238 ~t~~--~~~g~Dvvid~~G~  255 (364)
T 1gu7_A          238 WIKQ--SGGEAKLALNCVGG  255 (364)
T ss_dssp             HHHH--HTCCEEEEEESSCH
T ss_pred             Hhhc--cCCCceEEEECCCc
Confidence            1100  01469999999984

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=97.54  E-value=0.0007  Score=63.15  Aligned_cols=103  Identities=14%  Similarity=0.190  Sum_probs=68.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCCh-hhHHHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF-QSVLKFKDSLQQW  135 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~-~~v~~~~~~~~~~  135 (365)
                      .|++|+|+|+ |+||...+..+...|+ +|+++++++++++.+. ++     +..   ..+|.++. +++.+.+.++   
T Consensus       191 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~l-----Ga~---~vi~~~~~~~~~~~~~~~~---  257 (374)
T 2jhf_A          191 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK-EV-----GAT---ECVNPQDYKKPIQEVLTEM---  257 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT-----TCS---EEECGGGCSSCHHHHHHHH---
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hh-----CCc---eEecccccchhHHHHHHHH---
Confidence            4789999995 9999999998888999 8999999998876543 32     322   12455431 2333333332   


Q ss_pred             HhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCC-CeEEEEcCCc
Q 017812          136 LLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVP-SRIVNVTSFT  204 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~-g~iV~vsS~~  204 (365)
                           ..+++|++|.++|..                       ...+..+..++.   . |++|.++...
T Consensus       258 -----~~~g~D~vid~~g~~-----------------------~~~~~~~~~l~~---~~G~iv~~G~~~  296 (374)
T 2jhf_A          258 -----SNGGVDFSFEVIGRL-----------------------DTMVTALSCCQE---AYGVSVIVGVPP  296 (374)
T ss_dssp             -----TTSCBSEEEECSCCH-----------------------HHHHHHHHHBCT---TTCEEEECSCCC
T ss_pred             -----hCCCCcEEEECCCCH-----------------------HHHHHHHHHhhc---CCcEEEEeccCC
Confidence                 224799999999851                       112334455543   5 8999988644

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.54  E-value=0.00016  Score=64.43  Aligned_cols=49  Identities=14%  Similarity=0.207  Sum_probs=44.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHh
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITS  105 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~  105 (365)
                      ++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++++++.+++..
T Consensus       117 ~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~  166 (272)
T 3pwz_A          117 PLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDH  166 (272)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCC
T ss_pred             CccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcc
Confidence            468999999998 7999999999999996 999999999999888887743

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=97.52  E-value=0.00081  Score=62.76  Aligned_cols=101  Identities=13%  Similarity=0.140  Sum_probs=67.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCCh-hhHHHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF-QSVLKFKDSLQQW  135 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~-~~v~~~~~~~~~~  135 (365)
                      .|++|+|+|+ |+||...+..+...|+ +|+++++++++++.+. ++     +..   ..+|.++. +++.+.+.++.  
T Consensus       195 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l-----Ga~---~vi~~~~~~~~~~~~v~~~~--  262 (376)
T 1e3i_A          195 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAK-AL-----GAT---DCLNPRELDKPVQDVITELT--  262 (376)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT-----TCS---EEECGGGCSSCHHHHHHHHH--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hh-----CCc---EEEccccccchHHHHHHHHh--
Confidence            4789999996 9999999988888999 8999999998876543 32     322   12354431 23333333332  


Q ss_pred             HhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCC-CeEEEEcC
Q 017812          136 LLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVP-SRIVNVTS  202 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~-g~iV~vsS  202 (365)
                            .+++|++|.++|..                       ...+.++..++.   . |++|.++.
T Consensus       263 ------~~g~Dvvid~~G~~-----------------------~~~~~~~~~l~~---~~G~iv~~G~  298 (376)
T 1e3i_A          263 ------AGGVDYSLDCAGTA-----------------------QTLKAAVDCTVL---GWGSCTVVGA  298 (376)
T ss_dssp             ------TSCBSEEEESSCCH-----------------------HHHHHHHHTBCT---TTCEEEECCC
T ss_pred             ------CCCccEEEECCCCH-----------------------HHHHHHHHHhhc---CCCEEEEECC
Confidence                  24799999999851                       113344455543   5 89999886

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=97.52  E-value=0.00024  Score=65.57  Aligned_cols=101  Identities=15%  Similarity=0.106  Sum_probs=66.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      .|++|+|+|| |++|...+..+...|+ +|+++++++++.+.+.+ + .        ....|..+. ++.+.+.++.   
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~-l-a--------~~v~~~~~~-~~~~~~~~~~---  228 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARP-Y-A--------DRLVNPLEE-DLLEVVRRVT---  228 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTT-T-C--------SEEECTTTS-CHHHHHHHHH---
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-h-H--------HhccCcCcc-CHHHHHHHhc---
Confidence            4789999999 9999999998888999 99999999876543321 1 1        112455543 2322222221   


Q ss_pred             hccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017812          137 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  204 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~  204 (365)
                           ..++|++|+++|.        .               ...+..++.++.   .|++|.+++..
T Consensus       229 -----~~g~D~vid~~g~--------~---------------~~~~~~~~~l~~---~G~iv~~g~~~  265 (343)
T 2dq4_A          229 -----GSGVEVLLEFSGN--------E---------------AAIHQGLMALIP---GGEARILGIPS  265 (343)
T ss_dssp             -----SSCEEEEEECSCC--------H---------------HHHHHHHHHEEE---EEEEEECCCCS
T ss_pred             -----CCCCCEEEECCCC--------H---------------HHHHHHHHHHhc---CCEEEEEecCC
Confidence                 1469999999984        1               123445555554   48999998743

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.51  E-value=0.00017  Score=64.48  Aligned_cols=50  Identities=12%  Similarity=0.122  Sum_probs=45.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhh
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSR  106 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~  106 (365)
                      ++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++++++.+++...
T Consensus       123 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~  173 (281)
T 3o8q_A          123 LLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAY  173 (281)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGG
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhcc
Confidence            467999999998 7999999999999996 9999999999999988887653

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=97.51  E-value=0.00036  Score=63.68  Aligned_cols=98  Identities=17%  Similarity=0.197  Sum_probs=66.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhc
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  138 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~  138 (365)
                      |+ |+|+||+|++|...+..+...|++|+++++++++.+.+.+ +     +....   +|..+.+.    .+++      
T Consensus       148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~-l-----Ga~~v---i~~~~~~~----~~~~------  207 (324)
T 3nx4_A          148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKS-L-----GANRI---LSRDEFAE----SRPL------  207 (324)
T ss_dssp             CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHH-H-----TCSEE---EEGGGSSC----CCSS------
T ss_pred             Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c-----CCCEE---EecCCHHH----HHhh------
Confidence            46 9999999999999999999999999999999988766543 3     32222   23333222    1111      


Q ss_pred             cCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017812          139 SDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  205 (365)
Q Consensus       139 ~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~  205 (365)
                        ..+++|+++.++|.         +               ..+..+..++.   .|++|.++...+
T Consensus       208 --~~~~~d~v~d~~g~---------~---------------~~~~~~~~l~~---~G~iv~~G~~~~  245 (324)
T 3nx4_A          208 --EKQLWAGAIDTVGD---------K---------------VLAKVLAQMNY---GGCVAACGLAGG  245 (324)
T ss_dssp             --CCCCEEEEEESSCH---------H---------------HHHHHHHTEEE---EEEEEECCCTTC
T ss_pred             --cCCCccEEEECCCc---------H---------------HHHHHHHHHhc---CCEEEEEecCCC
Confidence              23579999998873         0               12334455544   589999987643

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.49  E-value=0.00052  Score=54.49  Aligned_cols=73  Identities=14%  Similarity=0.102  Sum_probs=56.3

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhcc
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  139 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~  139 (365)
                      +.++|.|+ |.+|..+|+.|.+.|++|+++++++++.+++.+    .    .+.++..|.++++.++++           
T Consensus         8 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~----~----g~~~i~gd~~~~~~l~~a-----------   67 (140)
T 3fwz_A            8 NHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRE----R----GVRAVLGNAANEEIMQLA-----------   67 (140)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----T----TCEEEESCTTSHHHHHHT-----------
T ss_pred             CCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH----c----CCCEEECCCCCHHHHHhc-----------
Confidence            45788887 889999999999999999999999987765442    1    356788999998765442           


Q ss_pred             CCCCCeeEEEecCC
Q 017812          140 DMHSSIQLLINNAG  153 (365)
Q Consensus       140 ~~~~~id~lv~nAG  153 (365)
                       .....|++|...+
T Consensus        68 -~i~~ad~vi~~~~   80 (140)
T 3fwz_A           68 -HLECAKWLILTIP   80 (140)
T ss_dssp             -TGGGCSEEEECCS
T ss_pred             -CcccCCEEEEECC
Confidence             1135788887766

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=97.49  E-value=0.0014  Score=61.06  Aligned_cols=78  Identities=12%  Similarity=0.166  Sum_probs=53.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .|++|+|+||+|++|...+..+...|++|+.++ ++++++. .+++     +..   ..+|..+.+ +.   +.+++.  
T Consensus       164 ~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~-~~~l-----Ga~---~vi~~~~~~-~~---~~v~~~--  227 (371)
T 3gqv_A          164 KPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDL-AKSR-----GAE---EVFDYRAPN-LA---QTIRTY--  227 (371)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHH-HHHT-----TCS---EEEETTSTT-HH---HHHHHH--
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHH-HHHc-----CCc---EEEECCCch-HH---HHHHHH--
Confidence            589999999999999999999999999999887 5666543 2332     322   123555533 22   233332  


Q ss_pred             ccCCCCCeeEEEecCCc
Q 017812          138 DSDMHSSIQLLINNAGI  154 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~  154 (365)
                         ..+++|+++.++|.
T Consensus       228 ---t~g~~d~v~d~~g~  241 (371)
T 3gqv_A          228 ---TKNNLRYALDCITN  241 (371)
T ss_dssp             ---TTTCCCEEEESSCS
T ss_pred             ---ccCCccEEEECCCc
Confidence               23569999999995

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=97.48  E-value=0.00082  Score=62.87  Aligned_cols=104  Identities=13%  Similarity=0.095  Sum_probs=67.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCC-CEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCC--ChhhHHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREG-FHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS--SFQSVLKFKDSLQQ  134 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G-~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls--~~~~v~~~~~~~~~  134 (365)
                      .|++|+|+| +|++|...+..+...| ++|+++++++++++.+. ++     +.. .+  +|..  +.++   +.+++.+
T Consensus       195 ~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~-~l-----Ga~-~v--i~~~~~~~~~---~~~~v~~  261 (380)
T 1vj0_A          195 AGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE-EI-----GAD-LT--LNRRETSVEE---RRKAIMD  261 (380)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH-HT-----TCS-EE--EETTTSCHHH---HHHHHHH
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH-Hc-----CCc-EE--EeccccCcch---HHHHHHH
Confidence            478999999 8999999999888899 59999999988766543 22     322 12  3433  1223   3333443


Q ss_pred             HHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017812          135 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  204 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~  204 (365)
                      ..    ...++|++|.++|..                       ..++..++.++.   .|++|.++...
T Consensus       262 ~~----~g~g~Dvvid~~g~~-----------------------~~~~~~~~~l~~---~G~iv~~G~~~  301 (380)
T 1vj0_A          262 IT----HGRGADFILEATGDS-----------------------RALLEGSELLRR---GGFYSVAGVAV  301 (380)
T ss_dssp             HT----TTSCEEEEEECSSCT-----------------------THHHHHHHHEEE---EEEEEECCCCS
T ss_pred             Hh----CCCCCcEEEECCCCH-----------------------HHHHHHHHHHhc---CCEEEEEecCC
Confidence            21    113699999999851                       112334455544   48999998754

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.44  E-value=0.00016  Score=58.51  Aligned_cols=79  Identities=15%  Similarity=0.148  Sum_probs=56.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      +..++.++|.|+ |.+|..+++.|.+.|++|++++|++++.+.+.+       ......+..|.++.+.+.+.       
T Consensus        16 ~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~-------~~g~~~~~~d~~~~~~l~~~-------   80 (155)
T 2g1u_A           16 KQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS-------EFSGFTVVGDAAEFETLKEC-------   80 (155)
T ss_dssp             -CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT-------TCCSEEEESCTTSHHHHHTT-------
T ss_pred             ccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh-------cCCCcEEEecCCCHHHHHHc-------
Confidence            356789999996 999999999999999999999999877543210       11244667788776543221       


Q ss_pred             HhccCCCCCeeEEEecCCc
Q 017812          136 LLDSDMHSSIQLLINNAGI  154 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~  154 (365)
                           .....|++|.+.+.
T Consensus        81 -----~~~~ad~Vi~~~~~   94 (155)
T 2g1u_A           81 -----GMEKADMVFAFTND   94 (155)
T ss_dssp             -----TGGGCSEEEECSSC
T ss_pred             -----CcccCCEEEEEeCC
Confidence                 11358999988773

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=97.44  E-value=0.0013  Score=60.62  Aligned_cols=101  Identities=21%  Similarity=0.189  Sum_probs=66.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHC--CCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSRE--GFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~--G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      .|++|+|+|| |+||...+..+...  |++|+++++++++.+.+. ++     +... +  +|..+.   ....+++.  
T Consensus       170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~-~l-----Ga~~-v--i~~~~~---~~~~~~~~--  234 (344)
T 2h6e_A          170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFAL-EL-----GADY-V--SEMKDA---ESLINKLT--  234 (344)
T ss_dssp             SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHH-HH-----TCSE-E--ECHHHH---HHHHHHHH--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHH-Hh-----CCCE-E--eccccc---hHHHHHhh--
Confidence            4789999999 89999999888888  999999999988776543 33     2221 1  233320   12223332  


Q ss_pred             HhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017812          136 LLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  204 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~  204 (365)
                           ...++|++|.++|..                       ...+..++.++.   .|++|.++...
T Consensus       235 -----~g~g~D~vid~~g~~-----------------------~~~~~~~~~l~~---~G~iv~~g~~~  272 (344)
T 2h6e_A          235 -----DGLGASIAIDLVGTE-----------------------ETTYNLGKLLAQ---EGAIILVGMEG  272 (344)
T ss_dssp             -----TTCCEEEEEESSCCH-----------------------HHHHHHHHHEEE---EEEEEECCCCS
T ss_pred             -----cCCCccEEEECCCCh-----------------------HHHHHHHHHhhc---CCEEEEeCCCC
Confidence                 123799999999851                       123444555544   48999988754

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.42  E-value=0.00026  Score=63.94  Aligned_cols=100  Identities=14%  Similarity=0.159  Sum_probs=61.9

Q ss_pred             CCCCE-EEEecCCC-----------------h-HHHHHHHHHHHCCCEEEEEecCchhH--------HHHHHHHHhh-cC
Q 017812           57 IKRPV-CIVTGATS-----------------G-LGAAAAYALSREGFHVVLVGRSSHLL--------SETMADITSR-NK  108 (365)
Q Consensus        57 ~~~k~-vlITGass-----------------G-IG~~~a~~la~~G~~Vil~~r~~~~~--------~~~~~~l~~~-~~  108 (365)
                      +.||. ||||+|..                 | .|.++|++++++|+.|+++.+...-.        ....+.+... ..
T Consensus        34 l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~sl~p~~r~~~~~~~~~~~~~~~~~  113 (313)
T 1p9o_A           34 AQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARSAFPYAHRFPPQTWLSALRPSGPA  113 (313)
T ss_dssp             HTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTSCCTTGGGSCHHHHHHHCEECCC-
T ss_pred             hcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCCcCcchhccCccchhhhhcccccc
Confidence            46777 99998865                 6 99999999999999999999853210        0001111000 00


Q ss_pred             CCceEEEEecCCChhhHHHHHHHHHHH------------------------HhccCCCCCeeEEEecCCccc
Q 017812          109 DARLEAFQVDLSSFQSVLKFKDSLQQW------------------------LLDSDMHSSIQLLINNAGILA  156 (365)
Q Consensus       109 ~~~~~~~~~Dls~~~~v~~~~~~~~~~------------------------~~~~~~~~~id~lv~nAG~~~  156 (365)
                      ...+..+.+|+.+.+++.+.+.+..+.                        .......+..|++|.+|++..
T Consensus       114 ~~~~~~i~v~v~sa~~m~~av~~~~~~~~~~~l~~i~f~tv~eyl~~L~~~~~~l~~~~~~di~i~aAAVsD  185 (313)
T 1p9o_A          114 LSGLLSLEAEENALPGFAEALRSYQEAAAAGTFLVVEFTTLADYLHLLQAAAQALNPLGPSAMFYLAAAVSD  185 (313)
T ss_dssp             CCSEEEEEEETTTSTTHHHHHHHHHHHHHHTCEEEEEECBHHHHHHHHHHHHHHHGGGGGGEEEEECSBCCS
T ss_pred             ccccceeeeccccHHHHHHHHHHHhhhhccccceeeccccHHHHHHHHHHhhHHhhccCCCCEEEECCchhh
Confidence            123456777777777776666543200                        000002357999999999974

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=97.41  E-value=0.00015  Score=66.57  Aligned_cols=40  Identities=30%  Similarity=0.423  Sum_probs=35.9

Q ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHH
Q 017812           61 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETM  100 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~  100 (365)
                      +|+|+||+||||...+..+...|++|+++++++++++.+.
T Consensus       153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~  192 (330)
T 1tt7_A          153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLK  192 (330)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHH
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            7999999999999999998899999999999988776543

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.39  E-value=0.00017  Score=57.68  Aligned_cols=44  Identities=16%  Similarity=0.186  Sum_probs=39.7

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHH
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADI  103 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l  103 (365)
                      +++++|.|+ |++|+.+++.|.+.|++|++++|++++.++..+++
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~   64 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKY   64 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHh
Confidence            789999997 99999999999999999999999999887766665

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=97.38  E-value=0.0017  Score=60.06  Aligned_cols=79  Identities=23%  Similarity=0.246  Sum_probs=53.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCC--ChhhHHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS--SFQSVLKFKDSLQQ  134 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls--~~~~v~~~~~~~~~  134 (365)
                      .|++|+|+|+ |++|...+..+...|+ +|+++++++++++.+. ++     +.. .+  +|..  +.+   .+.+++.+
T Consensus       171 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l-----Ga~-~v--i~~~~~~~~---~~~~~i~~  237 (356)
T 1pl8_A          171 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-EI-----GAD-LV--LQISKESPQ---EIARKVEG  237 (356)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HT-----TCS-EE--EECSSCCHH---HHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh-----CCC-EE--EcCcccccc---hHHHHHHH
Confidence            4789999996 8999999988888999 9999999988765443 22     322 22  3444  222   23333333


Q ss_pred             HHhccCCCCCeeEEEecCCc
Q 017812          135 WLLDSDMHSSIQLLINNAGI  154 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~  154 (365)
                      ..    . +++|++|.++|.
T Consensus       238 ~~----~-~g~D~vid~~g~  252 (356)
T 1pl8_A          238 QL----G-CKPEVTIECTGA  252 (356)
T ss_dssp             HH----T-SCCSEEEECSCC
T ss_pred             Hh----C-CCCCEEEECCCC
Confidence            21    2 469999999984

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=97.38  E-value=0.0018  Score=61.01  Aligned_cols=79  Identities=16%  Similarity=0.240  Sum_probs=54.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      .|.+|+|+|| |++|...+..+...|+ +|+++++++++++.+ +++     +..   ..+|..+.+-    .+++.+..
T Consensus       213 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~-~~l-----Ga~---~vi~~~~~~~----~~~i~~~t  278 (404)
T 3ip1_A          213 PGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLA-KEL-----GAD---HVIDPTKENF----VEAVLDYT  278 (404)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH-HHH-----TCS---EEECTTTSCH----HHHHHHHT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHc-----CCC---EEEcCCCCCH----HHHHHHHh
Confidence            4889999998 8999999988888999 999999998876544 333     322   1235444332    23333321


Q ss_pred             hccCCCCCeeEEEecCCc
Q 017812          137 LDSDMHSSIQLLINNAGI  154 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~  154 (365)
                          ...++|++|.++|.
T Consensus       279 ----~g~g~D~vid~~g~  292 (404)
T 3ip1_A          279 ----NGLGAKLFLEATGV  292 (404)
T ss_dssp             ----TTCCCSEEEECSSC
T ss_pred             ----CCCCCCEEEECCCC
Confidence                12469999999995

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=97.36  E-value=0.0008  Score=62.74  Aligned_cols=106  Identities=17%  Similarity=0.158  Sum_probs=68.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      .|++|+|+|+ |++|...+..+...|+ +|+++++++++.+.+ +++     +..   ...|.++.+-.    +.+.+..
T Consensus       182 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~~l-----Ga~---~vi~~~~~~~~----~~i~~~~  247 (370)
T 4ej6_A          182 AGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRLA-EEV-----GAT---ATVDPSAGDVV----EAIAGPV  247 (370)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH-HHH-----TCS---EEECTTSSCHH----HHHHSTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHc-----CCC---EEECCCCcCHH----HHHHhhh
Confidence            4789999998 8999999988888999 899999998876533 333     322   12455554322    2222100


Q ss_pred             hccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017812          137 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  205 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~  205 (365)
                      ..  ..+++|++|.++|..                       ...+..+..++.   .|++|.++...+
T Consensus       248 ~~--~~gg~Dvvid~~G~~-----------------------~~~~~~~~~l~~---~G~vv~~G~~~~  288 (370)
T 4ej6_A          248 GL--VPGGVDVVIECAGVA-----------------------ETVKQSTRLAKA---GGTVVILGVLPQ  288 (370)
T ss_dssp             SS--STTCEEEEEECSCCH-----------------------HHHHHHHHHEEE---EEEEEECSCCCT
T ss_pred             hc--cCCCCCEEEECCCCH-----------------------HHHHHHHHHhcc---CCEEEEEeccCC
Confidence            00  235899999999851                       123345555554   489999886543

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=97.36  E-value=0.0012  Score=61.50  Aligned_cols=103  Identities=14%  Similarity=0.179  Sum_probs=67.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCCh-hhHHHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF-QSVLKFKDSLQQW  135 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~-~~v~~~~~~~~~~  135 (365)
                      .|++|+|+|+ |+||...+..+...|+ +|+++++++++++.+. ++     +..   ..+|..+. +++.+.+.++   
T Consensus       191 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l-----Ga~---~vi~~~~~~~~~~~~i~~~---  257 (373)
T 1p0f_A          191 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI-EL-----GAT---ECLNPKDYDKPIYEVICEK---  257 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HT-----TCS---EEECGGGCSSCHHHHHHHH---
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-Hc-----CCc---EEEecccccchHHHHHHHH---
Confidence            4789999996 9999999888888899 8999999998876543 32     322   12344431 2333333322   


Q ss_pred             HhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCC-CeEEEEcCCc
Q 017812          136 LLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVP-SRIVNVTSFT  204 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~-g~iV~vsS~~  204 (365)
                           ..+++|++|.++|..                       ...+..+..++.   . |++|.++...
T Consensus       258 -----t~gg~Dvvid~~g~~-----------------------~~~~~~~~~l~~---~~G~iv~~G~~~  296 (373)
T 1p0f_A          258 -----TNGGVDYAVECAGRI-----------------------ETMMNALQSTYC---GSGVTVVLGLAS  296 (373)
T ss_dssp             -----TTSCBSEEEECSCCH-----------------------HHHHHHHHTBCT---TTCEEEECCCCC
T ss_pred             -----hCCCCCEEEECCCCH-----------------------HHHHHHHHHHhc---CCCEEEEEccCC
Confidence                 224799999999851                       123344555544   5 8999988654

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=97.34  E-value=0.0045  Score=56.44  Aligned_cols=119  Identities=13%  Similarity=0.078  Sum_probs=78.2

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhhcCC--CceEEEEecCCChhhHHHHHHHHHH
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRNKD--ARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~--~Vil~~r~~~~~~~~~~~l~~~~~~--~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      .+.+.|+|+ |.+|..+|..|+..|.  +|+++++++++++....++....+-  ..+....-|   .+.          
T Consensus         5 ~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~---~~a----------   70 (326)
T 3pqe_A            5 VNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT---YED----------   70 (326)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC---GGG----------
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc---HHH----------
Confidence            467999996 9999999999999996  8999999999888877777654221  233333222   111          


Q ss_pred             HHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccc
Q 017812          135 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHR  206 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~  206 (365)
                             ...-|++|..||.... +..+.   .+.++.|.--...+.+.+    .+....+.++++|-....
T Consensus        71 -------~~~aDvVvi~ag~p~k-pG~~R---~dL~~~N~~Iv~~i~~~I----~~~~p~a~vlvvtNPvd~  127 (326)
T 3pqe_A           71 -------CKDADIVCICAGANQK-PGETR---LELVEKNLKIFKGIVSEV----MASGFDGIFLVATNPVDI  127 (326)
T ss_dssp             -------GTTCSEEEECCSCCCC-TTCCH---HHHHHHHHHHHHHHHHHH----HHTTCCSEEEECSSSHHH
T ss_pred             -------hCCCCEEEEecccCCC-CCccH---HHHHHHHHHHHHHHHHHH----HHhcCCeEEEEcCChHHH
Confidence                   1348999999997432 22232   234666665444444444    443336788888876543

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.33  E-value=0.00071  Score=58.03  Aligned_cols=73  Identities=14%  Similarity=0.117  Sum_probs=57.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhccC
Q 017812           61 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  140 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~~  140 (365)
                      .++|.|+ |.+|..+|+.|.++|++|+++++++++.+++.+..       .+.++..|.++.+.+++.            
T Consensus         2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~-------~~~~i~gd~~~~~~l~~a------------   61 (218)
T 3l4b_C            2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKL-------KATIIHGDGSHKEILRDA------------   61 (218)
T ss_dssp             CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHS-------SSEEEESCTTSHHHHHHH------------
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHc-------CCeEEEcCCCCHHHHHhc------------
Confidence            4899997 88999999999999999999999998776654331       356899999998766543            


Q ss_pred             CCCCeeEEEecCC
Q 017812          141 MHSSIQLLINNAG  153 (365)
Q Consensus       141 ~~~~id~lv~nAG  153 (365)
                      .....|++|...+
T Consensus        62 ~i~~ad~vi~~~~   74 (218)
T 3l4b_C           62 EVSKNDVVVILTP   74 (218)
T ss_dssp             TCCTTCEEEECCS
T ss_pred             CcccCCEEEEecC
Confidence            2346888887665

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=97.33  E-value=0.00077  Score=62.65  Aligned_cols=78  Identities=12%  Similarity=0.200  Sum_probs=52.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHH-CCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSR-EGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~-~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      .|++|+|+||+|++|...+..+.. .|++|+++++++++.+.+. ++     +...   ..|..+  +   +.+++.+. 
T Consensus       171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~-~l-----Gad~---vi~~~~--~---~~~~v~~~-  235 (363)
T 4dvj_A          171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVK-SL-----GAHH---VIDHSK--P---LAAEVAAL-  235 (363)
T ss_dssp             SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHH-HT-----TCSE---EECTTS--C---HHHHHHTT-
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHH-Hc-----CCCE---EEeCCC--C---HHHHHHHh-
Confidence            588999999999999887765554 4899999999988766543 22     3221   234433  2   23333331 


Q ss_pred             hccCCCCCeeEEEecCCc
Q 017812          137 LDSDMHSSIQLLINNAGI  154 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~  154 (365)
                          ..+++|+++.++|.
T Consensus       236 ----~~~g~Dvvid~~g~  249 (363)
T 4dvj_A          236 ----GLGAPAFVFSTTHT  249 (363)
T ss_dssp             ----CSCCEEEEEECSCH
T ss_pred             ----cCCCceEEEECCCc
Confidence                23579999999984

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=97.33  E-value=0.0019  Score=58.94  Aligned_cols=121  Identities=13%  Similarity=0.169  Sum_probs=72.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhhcCC-CceEEEEecCCChhhHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRNKD-ARLEAFQVDLSSFQSVLKFKDSL  132 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~--~Vil~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~Dls~~~~v~~~~~~~  132 (365)
                      +..++.|.|+|+ |++|..+|..|+..|.  +|++.++++++++....++....+- ..+....-   +.+         
T Consensus         6 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~---~~~---------   72 (326)
T 3vku_A            6 DKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSA---EYS---------   72 (326)
T ss_dssp             -CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEEC---CGG---------
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEEC---cHH---------
Confidence            456778999997 9999999999999997  8999999999888877777654320 12232221   111         


Q ss_pred             HHHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017812          133 QQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  205 (365)
Q Consensus       133 ~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~  205 (365)
                              ....-|++|..||..... ..+.   .+.++.|.-    +.+.+.+.+.+....+.++++|-...
T Consensus        73 --------a~~~aDiVvi~ag~~~kp-G~tR---~dL~~~N~~----I~~~i~~~i~~~~p~a~ilvvtNPvd  129 (326)
T 3vku_A           73 --------DAKDADLVVITAGAPQKP-GETR---LDLVNKNLK----ILKSIVDPIVDSGFNGIFLVAANPVD  129 (326)
T ss_dssp             --------GGTTCSEEEECCCCC------------------------CHHHHHHHHHTTTCCSEEEECSSSHH
T ss_pred             --------HhcCCCEEEECCCCCCCC-CchH---HHHHHHHHH----HHHHHHHHHHhcCCceEEEEccCchH
Confidence                    124589999999975321 2221   234555553    34444555555444688888886553

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=97.31  E-value=0.0029  Score=57.68  Aligned_cols=120  Identities=16%  Similarity=0.190  Sum_probs=74.9

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhc----CCCceEEEEecCCChhhHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRN----KDARLEAFQVDLSSFQSVLKFKDS  131 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~----~~~~~~~~~~Dls~~~~v~~~~~~  131 (365)
                      |+.+.+.|.|| |.+|.++|..|+..|. +|+++++++++++....++....    ...++.. ..|   .+.       
T Consensus         5 m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-t~d---~~a-------   72 (324)
T 3gvi_A            5 MARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTG-AND---YAA-------   72 (324)
T ss_dssp             -CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEE-ESS---GGG-------
T ss_pred             CcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEE-eCC---HHH-------
Confidence            45678999998 9999999999999998 99999999988776666665432    1222221 122   221       


Q ss_pred             HHHHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccc
Q 017812          132 LQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHR  206 (365)
Q Consensus       132 ~~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~  206 (365)
                                ...-|++|..||..... ..+.   .+.+..|.--.    +.+.+.+.+....+.++++|-....
T Consensus        73 ----------~~~aDiVIiaag~p~k~-G~~R---~dl~~~N~~i~----~~i~~~i~~~~p~a~iivvtNPvd~  129 (324)
T 3gvi_A           73 ----------IEGADVVIVTAGVPRKP-GMSR---DDLLGINLKVM----EQVGAGIKKYAPEAFVICITNPLDA  129 (324)
T ss_dssp             ----------GTTCSEEEECCSCCCC---------CHHHHHHHHHH----HHHHHHHHHHCTTCEEEECCSSHHH
T ss_pred             ----------HCCCCEEEEccCcCCCC-CCCH---HHHHHhhHHHH----HHHHHHHHHHCCCeEEEecCCCcHH
Confidence                      13489999999975322 2222   23455555444    4444444433336788888876543

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=97.31  E-value=0.004  Score=56.88  Aligned_cols=120  Identities=14%  Similarity=0.165  Sum_probs=80.2

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhh--cCCCceEEEEecCCChhhHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSR--NKDARLEAFQVDLSSFQSVLKFKDSL  132 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~--~Vil~~r~~~~~~~~~~~l~~~--~~~~~~~~~~~Dls~~~~v~~~~~~~  132 (365)
                      ...+.|.|+|+ |++|.++|..|+.+|.  +|++.++++++++....++...  ++.. ...+..  .|.+.        
T Consensus        17 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~-~~i~~~--~d~~~--------   84 (331)
T 4aj2_A           17 VPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKT-PKIVSS--KDYSV--------   84 (331)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSC-CEEEEC--SSGGG--------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCC-CeEEEc--CCHHH--------
Confidence            45678999998 9999999999999997  8999999999888888888653  2211 122222  22221        


Q ss_pred             HHHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017812          133 QQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  205 (365)
Q Consensus       133 ~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~  205 (365)
                               ...-|++|..||.... +.++.   .+.++.|.-=...+.+.+..+    ...+.++++|-...
T Consensus        85 ---------~~~aDiVvi~aG~~~k-pG~tR---~dL~~~N~~I~~~i~~~i~~~----~p~a~vlvvtNPvd  140 (331)
T 4aj2_A           85 ---------TANSKLVIITAGARQQ-EGESR---LNLVQRNVNIFKFIIPNVVKY----SPQCKLLIVSNPVD  140 (331)
T ss_dssp             ---------GTTEEEEEECCSCCCC-TTCCG---GGGHHHHHHHHHHHHHHHHHH----CTTCEEEECSSSHH
T ss_pred             ---------hCCCCEEEEccCCCCC-CCccH---HHHHHHHHHHHHHHHHHHHHH----CCCeEEEEecChHH
Confidence                     1358999999998533 23333   245666665555555555443    33578888887654

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=97.30  E-value=0.00063  Score=63.06  Aligned_cols=100  Identities=14%  Similarity=0.162  Sum_probs=65.2

Q ss_pred             CCCCEEEEecCCChHHHHH-HHHH-HHCCCE-EEEEecCch---hHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAA-AYAL-SREGFH-VVLVGRSSH---LLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKD  130 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~-a~~l-a~~G~~-Vil~~r~~~---~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~  130 (365)
                      +++++|+|+|| |++|... +..+ ...|++ |+.++++++   +.+.+. ++     +.  ..+  |..+.+ +.+ +.
T Consensus       171 ~~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~-~l-----Ga--~~v--~~~~~~-~~~-i~  237 (357)
T 2b5w_A          171 WDPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIE-EL-----DA--TYV--DSRQTP-VED-VP  237 (357)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHH-HT-----TC--EEE--ETTTSC-GGG-HH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHH-Hc-----CC--ccc--CCCccC-HHH-HH
Confidence            34589999999 9999998 6665 567996 999999987   765542 32     32  222  555432 222 22


Q ss_pred             HHHHHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017812          131 SLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  204 (365)
Q Consensus       131 ~~~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~  204 (365)
                      ++ .        +++|++|.++|..        .               ..+..+..++.   .|++|.++...
T Consensus       238 ~~-~--------gg~Dvvid~~g~~--------~---------------~~~~~~~~l~~---~G~iv~~g~~~  276 (357)
T 2b5w_A          238 DV-Y--------EQMDFIYEATGFP--------K---------------HAIQSVQALAP---NGVGALLGVPS  276 (357)
T ss_dssp             HH-S--------CCEEEEEECSCCH--------H---------------HHHHHHHHEEE---EEEEEECCCCC
T ss_pred             Hh-C--------CCCCEEEECCCCh--------H---------------HHHHHHHHHhc---CCEEEEEeCCC
Confidence            22 2        3799999999851        1               12344455544   48999998754

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=97.27  E-value=0.0014  Score=59.79  Aligned_cols=63  Identities=17%  Similarity=0.173  Sum_probs=54.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCc-------------------hhHHHHHHHHHhhcCCCceEEE
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSS-------------------HLLSETMADITSRNKDARLEAF  115 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~  115 (365)
                      .+++++|+|.|+ ||+|.++|+.|+..|. ++.+++++.                   .|.+.+.+.+.+.+|..++..+
T Consensus        31 kL~~~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP~v~v~~~  109 (340)
T 3rui_A           31 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGV  109 (340)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEE
T ss_pred             HHhCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCCCCEEEEE
Confidence            367899999998 7899999999999997 899998854                   5788888999999888888888


Q ss_pred             EecC
Q 017812          116 QVDL  119 (365)
Q Consensus       116 ~~Dl  119 (365)
                      ..++
T Consensus       110 ~~~i  113 (340)
T 3rui_A          110 KLSI  113 (340)
T ss_dssp             CCCC
T ss_pred             eccc
Confidence            7665

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=97.26  E-value=0.0072  Score=54.26  Aligned_cols=117  Identities=15%  Similarity=0.146  Sum_probs=74.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhhc--CCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           61 VCIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRN--KDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G~--~Vil~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      .+.|+|| |.+|.++|..|+..|.  +|+++++++++++....++....  ......+...  +|.+.            
T Consensus         2 kI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~~a------------   66 (294)
T 1oju_A            2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYSL------------   66 (294)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCGGG------------
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe--CCHHH------------
Confidence            4789999 9999999999999997  99999999988765444443322  1112222211  12222            


Q ss_pred             hccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017812          137 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  205 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~  205 (365)
                           ...-|++|..||.... +..+..   +.++.|.    -+.+.+.+.+.+....+.++++|-...
T Consensus        67 -----~~~aDiVViaag~~~k-pG~~R~---dl~~~N~----~i~~~i~~~i~~~~p~a~iivvsNPvd  122 (294)
T 1oju_A           67 -----LKGSEIIVVTAGLARK-PGMTRL---DLAHKNA----GIIKDIAKKIVENAPESKILVVTNPMD  122 (294)
T ss_dssp             -----GTTCSEEEECCCCCCC-SSCCHH---HHHHHHH----HHHHHHHHHHHTTSTTCEEEECSSSHH
T ss_pred             -----hCCCCEEEECCCCCCC-CCCcHH---HHHHHHH----HHHHHHHHHHHhhCCCeEEEEeCCcch
Confidence                 1348999999998532 223333   3355554    445555555555554688888886553

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=97.24  E-value=0.0011  Score=61.45  Aligned_cols=78  Identities=18%  Similarity=0.144  Sum_probs=53.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHC-CCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSRE-GFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~-G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      .|++|+|+|| |++|...+..+... |++|+++++++++++.+. ++     +...   .+|..+.  +.+.+.++.   
T Consensus       186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~-~l-----Ga~~---vi~~~~~--~~~~v~~~~---  250 (359)
T 1h2b_A          186 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE-RL-----GADH---VVDARRD--PVKQVMELT---  250 (359)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH-HT-----TCSE---EEETTSC--HHHHHHHHT---
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-Hh-----CCCE---EEeccch--HHHHHHHHh---
Confidence            4789999999 89999998888788 999999999988766543 32     3221   2355543  322222221   


Q ss_pred             hccCCCCCeeEEEecCCc
Q 017812          137 LDSDMHSSIQLLINNAGI  154 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~  154 (365)
                          ...++|++|.++|.
T Consensus       251 ----~g~g~Dvvid~~G~  264 (359)
T 1h2b_A          251 ----RGRGVNVAMDFVGS  264 (359)
T ss_dssp             ----TTCCEEEEEESSCC
T ss_pred             ----CCCCCcEEEECCCC
Confidence                12379999999995

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=97.22  E-value=0.0055  Score=55.66  Aligned_cols=119  Identities=16%  Similarity=0.177  Sum_probs=74.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHCC--CEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhc
Q 017812           61 VCIVTGATSGLGAAAAYALSREG--FHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  138 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G--~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~  138 (365)
                      .|.|+||+|.+|..++..|+..|  ..|+++++++  .+....++.......++....    ..++.++.+         
T Consensus         2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~dL~~~~~~~~l~~~~----~t~d~~~a~---------   66 (314)
T 1mld_A            2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAADLSHIETRATVKGYL----GPEQLPDCL---------   66 (314)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHHHTTSSSSCEEEEEE----SGGGHHHHH---------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHHHhccCcCceEEEec----CCCCHHHHh---------
Confidence            48999999999999999999998  6899999987  334444554322111222210    012222221         


Q ss_pred             cCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccc
Q 017812          139 SDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHR  206 (365)
Q Consensus       139 ~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~  206 (365)
                          ...|++|+.||..... ..+.   .+.+..|.-....+.+.+.++-    ..++||++|-....
T Consensus        67 ----~~aDvVvi~ag~~~~~-g~~r---~dl~~~n~~i~~~i~~~i~~~~----p~a~viv~sNPv~~  122 (314)
T 1mld_A           67 ----KGCDVVVIPAGVPRKP-GMTR---DDLFNTNATIVATLTAACAQHC----PDAMICIISNPVNS  122 (314)
T ss_dssp             ----TTCSEEEECCSCCCCT-TCCG---GGGHHHHHHHHHHHHHHHHHHC----TTSEEEECSSCHHH
T ss_pred             ----CCCCEEEECCCcCCCC-CCcH---HHHHHHHHHHHHHHHHHHHhhC----CCeEEEEECCCcch
Confidence                3489999999985322 2222   2346777776666666665543    25799988765543

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=97.22  E-value=0.0057  Score=57.51  Aligned_cols=43  Identities=21%  Similarity=0.144  Sum_probs=38.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSET   99 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~   99 (365)
                      ++.+++|+|+|+ |.||+.+++.+...|++|++++++.++++.+
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~  211 (401)
T 1x13_A          169 KVPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQV  211 (401)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHH
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence            467899999997 8999999999999999999999999887665

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=97.21  E-value=0.0018  Score=58.90  Aligned_cols=74  Identities=14%  Similarity=0.229  Sum_probs=51.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .|++|+|+||+|++|...+..+...|++|+.++++ ++. +..+++     +...   ..|..+.+.+.       +   
T Consensus       152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~-~~~-~~~~~l-----Ga~~---~i~~~~~~~~~-------~---  211 (321)
T 3tqh_A          152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASK-RNH-AFLKAL-----GAEQ---CINYHEEDFLL-------A---  211 (321)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECH-HHH-HHHHHH-----TCSE---EEETTTSCHHH-------H---
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEecc-chH-HHHHHc-----CCCE---EEeCCCcchhh-------h---
Confidence            48899999999999999999999999999998854 332 333333     3221   23555433221       1   


Q ss_pred             ccCCCCCeeEEEecCCc
Q 017812          138 DSDMHSSIQLLINNAGI  154 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~  154 (365)
                         ...++|+++.++|.
T Consensus       212 ---~~~g~D~v~d~~g~  225 (321)
T 3tqh_A          212 ---ISTPVDAVIDLVGG  225 (321)
T ss_dssp             ---CCSCEEEEEESSCH
T ss_pred             ---hccCCCEEEECCCc
Confidence               22569999999984

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=97.14  E-value=0.0016  Score=61.36  Aligned_cols=47  Identities=23%  Similarity=0.385  Sum_probs=41.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADI  103 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l  103 (365)
                      ++.|++|+|.|+ |+||+.+++.|...|+ +|++++|+.+++++..+++
T Consensus       164 ~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~  211 (404)
T 1gpj_A          164 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL  211 (404)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH
T ss_pred             cccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc
Confidence            367999999998 9999999999999998 9999999998876666555

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=97.11  E-value=0.0013  Score=60.76  Aligned_cols=82  Identities=13%  Similarity=0.375  Sum_probs=66.7

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCc-------------------hhHHHHHHHHHhhcCCCceEEEE
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSS-------------------HLLSETMADITSRNKDARLEAFQ  116 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~  116 (365)
                      +++++|+|.|+ ||+|.++|+.|+..|. ++.+++++.                   .+.+.+.+.+.+.+|..++..+.
T Consensus       116 L~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~  194 (353)
T 3h5n_A          116 LKNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEIA  194 (353)
T ss_dssp             HHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEE
T ss_pred             HhCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEEee
Confidence            56789999998 8899999999999997 899999863                   47788888999999888999999


Q ss_pred             ecCCChhhHHHHHHHHHHHHhccCCCCCeeEEEecCC
Q 017812          117 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAG  153 (365)
Q Consensus       117 ~Dls~~~~v~~~~~~~~~~~~~~~~~~~id~lv~nAG  153 (365)
                      .++++..++..              ....|++|.+..
T Consensus       195 ~~i~~~~~~~~--------------~~~~DlVvd~~D  217 (353)
T 3h5n_A          195 LNINDYTDLHK--------------VPEADIWVVSAD  217 (353)
T ss_dssp             CCCCSGGGGGG--------------SCCCSEEEECCC
T ss_pred             cccCchhhhhH--------------hccCCEEEEecC
Confidence            88887653222              245899988653

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=97.11  E-value=0.0073  Score=54.95  Aligned_cols=121  Identities=12%  Similarity=0.135  Sum_probs=75.9

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcC--CCceEEEEecCCChhhHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNK--DARLEAFQVDLSSFQSVLKFKDSLQ  133 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dls~~~~v~~~~~~~~  133 (365)
                      |+.+.+.|+|+ |.+|.++|..|+..|. +|++.++++++++....++....+  +....+...  .|.+.         
T Consensus         3 m~~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t--~d~~a---------   70 (321)
T 3p7m_A            3 MARKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGT--NDYKD---------   70 (321)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCGGG---------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEc--CCHHH---------
Confidence            34567888895 9999999999999998 999999999888776666654311  112222211  12221         


Q ss_pred             HHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017812          134 QWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  205 (365)
Q Consensus       134 ~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~  205 (365)
                              ...-|++|..||.... +..+..   +.+..|.--...+.+.+..+    ...+.++++|-...
T Consensus        71 --------~~~aDvVIi~ag~p~k-~G~~R~---dl~~~N~~i~~~i~~~i~~~----~p~a~vivvtNPvd  126 (321)
T 3p7m_A           71 --------LENSDVVIVTAGVPRK-PGMSRD---DLLGINIKVMQTVGEGIKHN----CPNAFVICITNPLD  126 (321)
T ss_dssp             --------GTTCSEEEECCSCCCC-TTCCHH---HHHHHHHHHHHHHHHHHHHH----CTTCEEEECCSSHH
T ss_pred             --------HCCCCEEEEcCCcCCC-CCCCHH---HHHHHhHHHHHHHHHHHHHH----CCCcEEEEecCchH
Confidence                    1348999999997533 223332   34555655444444444333    33578888876544

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=97.10  E-value=0.0018  Score=59.76  Aligned_cols=103  Identities=14%  Similarity=0.115  Sum_probs=67.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      .|++|+|+|+ |+||...+..+...|+ +|+++++++++++.+ +++     +..   ..+|..+.+-    .+++.+..
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~-~~l-----Ga~---~vi~~~~~~~----~~~v~~~t  231 (352)
T 3fpc_A          166 LGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDIA-LEY-----GAT---DIINYKNGDI----VEQILKAT  231 (352)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHHHH-HHH-----TCC---EEECGGGSCH----HHHHHHHT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHh-----CCc---eEEcCCCcCH----HHHHHHHc
Confidence            4789999996 8999999888888899 899999998876543 333     322   2234444332    23333321


Q ss_pred             hccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017812          137 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  204 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~  204 (365)
                          ...++|+++.++|..                       ...+..++.++.   .|+++.++...
T Consensus       232 ----~g~g~D~v~d~~g~~-----------------------~~~~~~~~~l~~---~G~~v~~G~~~  269 (352)
T 3fpc_A          232 ----DGKGVDKVVIAGGDV-----------------------HTFAQAVKMIKP---GSDIGNVNYLG  269 (352)
T ss_dssp             ----TTCCEEEEEECSSCT-----------------------THHHHHHHHEEE---EEEEEECCCCC
T ss_pred             ----CCCCCCEEEECCCCh-----------------------HHHHHHHHHHhc---CCEEEEecccC
Confidence                123699999999852                       122334455544   48999998654

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=97.10  E-value=0.013  Score=52.15  Aligned_cols=43  Identities=21%  Similarity=0.280  Sum_probs=37.4

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHH
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADI  103 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l  103 (365)
                      ++|.|.|+ |.+|..+|..|++.|++|++.+|+++++++..+.+
T Consensus         5 ~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i   47 (283)
T 4e12_A            5 TNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRF   47 (283)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHH
Confidence            56777776 77999999999999999999999999888877664

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=97.08  E-value=0.0016  Score=60.25  Aligned_cols=75  Identities=19%  Similarity=0.235  Sum_probs=53.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .|++|+|+|+ |+||...+..+...|++|+++++++++.+.+.+++     +...   ..|..+.+.       +.+   
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~l-----Ga~~---vi~~~~~~~-------~~~---  240 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDL-----GADD---YVIGSDQAK-------MSE---  240 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTS-----CCSC---EEETTCHHH-------HHH---
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHc-----CCce---eeccccHHH-------HHH---
Confidence            4789999996 99999999888889999999999988765544232     2221   134444322       222   


Q ss_pred             ccCCCCCeeEEEecCCc
Q 017812          138 DSDMHSSIQLLINNAGI  154 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~  154 (365)
                         ..+++|++|.++|.
T Consensus       241 ---~~~g~D~vid~~g~  254 (357)
T 2cf5_A          241 ---LADSLDYVIDTVPV  254 (357)
T ss_dssp             ---STTTEEEEEECCCS
T ss_pred             ---hcCCCCEEEECCCC
Confidence               22469999999985

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=97.08  E-value=0.015  Score=52.99  Aligned_cols=119  Identities=15%  Similarity=0.088  Sum_probs=76.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhhc--CCCceEEEEecCCChhhHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRN--KDARLEAFQVDLSSFQSVLKFKDSLQ  133 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~--~Vil~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~Dls~~~~v~~~~~~~~  133 (365)
                      ..+.+.|+|+ |.+|..+|..|+..|.  .|++.++++++++....++....  +...-.....|..+            
T Consensus        20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~------------   86 (330)
T 3ldh_A           20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV------------   86 (330)
T ss_dssp             CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS------------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH------------
Confidence            3567999999 9999999999999997  89999999988887777765431  11111111223322            


Q ss_pred             HHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017812          134 QWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  205 (365)
Q Consensus       134 ~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~  205 (365)
                              ...-|++|..||..... .++.   .+.+..|.--.-.+.+.+.++    ...+.++++|-...
T Consensus        87 --------~~daDiVIitaG~p~kp-G~tR---~dll~~N~~I~k~i~~~I~k~----~P~a~ilvvtNPvd  142 (330)
T 3ldh_A           87 --------SAGSKLVVITAGARQQE-GESR---LNLVQRNVNIFKFIIPNIVKH----SPDCLKELHPELGT  142 (330)
T ss_dssp             --------CSSCSEEEECCSCCCCS-SCCT---TGGGHHHHHHHHHHHHHHHHH----CTTCEEEECSSSHH
T ss_pred             --------hCCCCEEEEeCCCCCCC-CCCH---HHHHHhhHHHHHHHHHHHHhh----CCCceEEeCCCccH
Confidence                    24589999999985332 2222   234555554444444444443    33678888887554

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=97.05  E-value=0.0054  Score=56.28  Aligned_cols=120  Identities=13%  Similarity=0.110  Sum_probs=74.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhh-cCCCceEEEEecCCChhhHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSR-NKDARLEAFQVDLSSFQSVLKFKDSLQ  133 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~--~Vil~~r~~~~~~~~~~~l~~~-~~~~~~~~~~~Dls~~~~v~~~~~~~~  133 (365)
                      +.++.|.|+|++|++|..+|..++.+|.  +|++++.++++++....++... ++..++.+ .   +|   ..+.+    
T Consensus         6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~-t---~d---~~~al----   74 (343)
T 3fi9_A            6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTF-T---SD---IKEAL----   74 (343)
T ss_dssp             SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEE-E---SC---HHHHH----
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEE-c---CC---HHHHh----
Confidence            4567899999999999999999999994  8999999998888777777553 11122221 1   12   21111    


Q ss_pred             HHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCe-EEEEcCCc
Q 017812          134 QWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSR-IVNVTSFT  204 (365)
Q Consensus       134 ~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~-iV~vsS~~  204 (365)
                               ..-|++|..||.... +..+   -.+.++.|.--...+.+.+..+    ...+. |+++|-..
T Consensus        75 ---------~dADvVvitaG~p~k-pG~~---R~dLl~~N~~I~~~i~~~i~~~----~p~a~~vlvvsNPv  129 (343)
T 3fi9_A           75 ---------TDAKYIVSSGGAPRK-EGMT---REDLLKGNAEIAAQLGKDIKSY----CPDCKHVIIIFNPA  129 (343)
T ss_dssp             ---------TTEEEEEECCC--------C---HHHHHHHHHHHHHHHHHHHHHH----CTTCCEEEECSSSH
T ss_pred             ---------CCCCEEEEccCCCCC-CCCC---HHHHHHHHHHHHHHHHHHHHHh----ccCcEEEEEecCch
Confidence                     348999999997432 2222   2345667765555555544433    33564 77777654

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=97.05  E-value=0.0051  Score=57.53  Aligned_cols=45  Identities=18%  Similarity=0.096  Sum_probs=39.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMA  101 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~  101 (365)
                      .+.+.+|+|.|+ |.+|..+|+.+...|++|+++++++++++.+.+
T Consensus       187 ~v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~  231 (405)
T 4dio_A          187 TVPAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVAS  231 (405)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHH
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence            367889999999 789999999999999999999999988766543

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=97.03  E-value=0.016  Score=52.56  Aligned_cols=119  Identities=24%  Similarity=0.257  Sum_probs=75.1

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecC--chhHHHHHHHHHhhc----CCCceEEEEecCCChhhHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRS--SHLLSETMADITSRN----KDARLEAFQVDLSSFQSVLKFK  129 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~--~~~~~~~~~~l~~~~----~~~~~~~~~~Dls~~~~v~~~~  129 (365)
                      ++.+.+.|.|+ |.+|..+|..|+..|. +|++.+++  +++++....++....    ...++.. .-|   .+      
T Consensus         6 ~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~-t~d---~~------   74 (315)
T 3tl2_A            6 IKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIG-TSD---YA------   74 (315)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEE-ESC---GG------
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEE-cCC---HH------
Confidence            35678999997 9999999999999999 99999999  555555555554321    1122221 112   21      


Q ss_pred             HHHHHHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017812          130 DSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  205 (365)
Q Consensus       130 ~~~~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~  205 (365)
                                 .....|++|..||..... ..+.   .+.++.|.--.-.+.+.+..+    ...+.++++|-...
T Consensus        75 -----------a~~~aDvVIiaag~p~kp-g~~R---~dl~~~N~~i~~~i~~~i~~~----~p~a~vlvvsNPvd  131 (315)
T 3tl2_A           75 -----------DTADSDVVVITAGIARKP-GMSR---DDLVATNSKIMKSITRDIAKH----SPNAIIVVLTNPVD  131 (315)
T ss_dssp             -----------GGTTCSEEEECCSCCCCT-TCCH---HHHHHHHHHHHHHHHHHHHHH----CTTCEEEECCSSHH
T ss_pred             -----------HhCCCCEEEEeCCCCCCC-CCCH---HHHHHHHHHHHHHHHHHHHHh----CCCeEEEECCChHH
Confidence                       124589999999985332 2333   345666665544454444443    33578888886543

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=97.00  E-value=0.0012  Score=61.69  Aligned_cols=104  Identities=12%  Similarity=0.067  Sum_probs=68.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCC-hhhHHHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSS-FQSVLKFKDSLQQW  135 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~-~~~v~~~~~~~~~~  135 (365)
                      .|.+|+|+|+ |+||...+..+...|+ +|+++++++++++.+. ++     +...   .+|..+ .+++.+.+.++   
T Consensus       193 ~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~-~l-----Ga~~---vi~~~~~~~~~~~~i~~~---  259 (378)
T 3uko_A          193 PGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETAK-KF-----GVNE---FVNPKDHDKPIQEVIVDL---  259 (378)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHH-TT-----TCCE---EECGGGCSSCHHHHHHHH---
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hc-----CCcE---EEccccCchhHHHHHHHh---
Confidence            4789999998 9999999988888999 8999999998876432 22     3221   245442 23333333332   


Q ss_pred             HhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017812          136 LLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  204 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~  204 (365)
                           ..+++|++|.++|..                       ...+..+..++..  .|+++.++...
T Consensus       260 -----~~gg~D~vid~~g~~-----------------------~~~~~~~~~l~~g--~G~iv~~G~~~  298 (378)
T 3uko_A          260 -----TDGGVDYSFECIGNV-----------------------SVMRAALECCHKG--WGTSVIVGVAA  298 (378)
T ss_dssp             -----TTSCBSEEEECSCCH-----------------------HHHHHHHHTBCTT--TCEEEECSCCC
T ss_pred             -----cCCCCCEEEECCCCH-----------------------HHHHHHHHHhhcc--CCEEEEEcccC
Confidence                 234899999999951                       1233344555431  28999998644

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=96.99  E-value=0.0039  Score=57.33  Aligned_cols=103  Identities=16%  Similarity=0.156  Sum_probs=66.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHC-CCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSRE-GFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~-G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      .|++|+|+|+ |++|...+..+... |++|+.+++++++++.+. ++     +... +  .|-.+  +.   .+++.+..
T Consensus       171 ~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~-~l-----Ga~~-~--i~~~~--~~---~~~v~~~t  235 (345)
T 3jv7_A          171 PGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALAR-EV-----GADA-A--VKSGA--GA---ADAIRELT  235 (345)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHH-HT-----TCSE-E--EECST--TH---HHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-Hc-----CCCE-E--EcCCC--cH---HHHHHHHh
Confidence            4889999998 99999887776666 689999999988776443 22     3222 2  23222  22   23333322


Q ss_pred             hccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017812          137 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  205 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~  205 (365)
                      +    ..++|+++.++|..                       ...+..+..++.   .|+++.++...+
T Consensus       236 ~----g~g~d~v~d~~G~~-----------------------~~~~~~~~~l~~---~G~iv~~G~~~~  274 (345)
T 3jv7_A          236 G----GQGATAVFDFVGAQ-----------------------STIDTAQQVVAV---DGHISVVGIHAG  274 (345)
T ss_dssp             G----GGCEEEEEESSCCH-----------------------HHHHHHHHHEEE---EEEEEECSCCTT
T ss_pred             C----CCCCeEEEECCCCH-----------------------HHHHHHHHHHhc---CCEEEEECCCCC
Confidence            1    23799999999951                       123445555554   589999987654

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=96.98  E-value=0.0029  Score=58.63  Aligned_cols=75  Identities=15%  Similarity=0.179  Sum_probs=53.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .|++|+|+|| |+||...+..+...|++|+++++++++++.+.+ +     +... +  .|..+.++.   .+++     
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~-l-----Ga~~-v--~~~~~~~~~---~~~~-----  240 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMK-M-----GADH-Y--IATLEEGDW---GEKY-----  240 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-H-----TCSE-E--EEGGGTSCH---HHHS-----
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-c-----CCCE-E--EcCcCchHH---HHHh-----
Confidence            4789999999 999999998888899999999999988765543 3     3221 1  344433111   1111     


Q ss_pred             ccCCCCCeeEEEecCCc
Q 017812          138 DSDMHSSIQLLINNAGI  154 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~  154 (365)
                          .+++|++|.++|.
T Consensus       241 ----~~~~D~vid~~g~  253 (360)
T 1piw_A          241 ----FDTFDLIVVCASS  253 (360)
T ss_dssp             ----CSCEEEEEECCSC
T ss_pred             ----hcCCCEEEECCCC
Confidence                1479999999986

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=96.97  E-value=0.0014  Score=60.60  Aligned_cols=38  Identities=21%  Similarity=0.211  Sum_probs=32.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHL   95 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~   95 (365)
                      .|++|+|+||+|++|...+..+...|++|+.++++.++
T Consensus       167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~  204 (357)
T 1zsy_A          167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPD  204 (357)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSC
T ss_pred             CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccc
Confidence            48899999999999999888877889998888766543

>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A

Probab=96.96  E-value=0.0022  Score=62.74  Aligned_cols=63  Identities=17%  Similarity=0.166  Sum_probs=53.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecC-------------------chhHHHHHHHHHhhcCCCceEEE
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRS-------------------SHLLSETMADITSRNKDARLEAF  115 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~  115 (365)
                      .++++.|+|.|+ ||+|.++|+.|+..|. ++.+++.+                   ..+.+.+.+.+++.+|..++..+
T Consensus       324 kL~~~kVLIVGa-GGLGs~va~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAeaaa~~L~~iNP~v~v~~~  402 (598)
T 3vh1_A          324 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGV  402 (598)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHTTTCCEEEEECCSBCCTTSTTTSTTCCSTTCSSBHHHHHHHHHHHHCTTCEEEEE
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccchhhcCcHHHHHHHHHHHhHCCCcEEEEE
Confidence            367889999987 6799999999999997 89999764                   25888999999999888888888


Q ss_pred             EecC
Q 017812          116 QVDL  119 (365)
Q Consensus       116 ~~Dl  119 (365)
                      ..++
T Consensus       403 ~~~I  406 (598)
T 3vh1_A          403 KLSI  406 (598)
T ss_dssp             CCCC
T ss_pred             eccc
Confidence            7665

>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A

Probab=96.95  E-value=0.0037  Score=61.20  Aligned_cols=63  Identities=17%  Similarity=0.173  Sum_probs=54.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCc-------------------hhHHHHHHHHHhhcCCCceEEE
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSS-------------------HLLSETMADITSRNKDARLEAF  115 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~  115 (365)
                      .+++..|+|.|+ ||+|.++|+.|+..|. ++.+++++.                   .+.+.+.+.+.+.+|..++..+
T Consensus       323 kL~~arVLIVGa-GGLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iNP~V~v~~~  401 (615)
T 4gsl_A          323 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGV  401 (615)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEE
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhCCCcEEEEe
Confidence            367889999998 6899999999999997 999999864                   5788899999999988888888


Q ss_pred             EecC
Q 017812          116 QVDL  119 (365)
Q Consensus       116 ~~Dl  119 (365)
                      ..++
T Consensus       402 ~~~I  405 (615)
T 4gsl_A          402 KLSI  405 (615)
T ss_dssp             CCCC
T ss_pred             eccc
Confidence            7665

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=96.94  E-value=0.00069  Score=60.51  Aligned_cols=45  Identities=27%  Similarity=0.361  Sum_probs=39.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMA  101 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~  101 (365)
                      +++++.++|.|+ ||.|++++..|++.|+ +|+++.|+.++++++.+
T Consensus       119 ~~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~  164 (282)
T 3fbt_A          119 EIKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYG  164 (282)
T ss_dssp             CCTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCT
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence            367999999998 6999999999999998 99999999988766543

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=96.93  E-value=0.0018  Score=60.57  Aligned_cols=79  Identities=15%  Similarity=0.099  Sum_probs=54.0

Q ss_pred             CCEEEEec-CCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           59 RPVCIVTG-ATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        59 ~k~vlITG-assGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      |.+|+|.| |+|++|...+..+...|++|+.+++++++.+.+.+ +     +...   .+|..+.+ +.+.+.++..   
T Consensus       171 g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~~-l-----Ga~~---~~~~~~~~-~~~~v~~~t~---  237 (379)
T 3iup_A          171 GHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLKA-Q-----GAVH---VCNAASPT-FMQDLTEALV---  237 (379)
T ss_dssp             TCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHHH-T-----TCSC---EEETTSTT-HHHHHHHHHH---
T ss_pred             CCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHh-C-----CCcE---EEeCCChH-HHHHHHHHhc---
Confidence            67899987 99999999998888899999999999887765432 2     2221   23444433 2222222221   


Q ss_pred             ccCCCCCeeEEEecCCc
Q 017812          138 DSDMHSSIQLLINNAGI  154 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~  154 (365)
                          ..++|+++.++|.
T Consensus       238 ----~~g~d~v~d~~g~  250 (379)
T 3iup_A          238 ----STGATIAFDATGG  250 (379)
T ss_dssp             ----HHCCCEEEESCEE
T ss_pred             ----CCCceEEEECCCc
Confidence                1369999999985

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=96.91  E-value=0.0059  Score=55.86  Aligned_cols=120  Identities=13%  Similarity=0.128  Sum_probs=75.7

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCC--E-----EEEEecCc--hhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHH
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGF--H-----VVLVGRSS--HLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKD  130 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~--~-----Vil~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~  130 (365)
                      ..|.||||+|.||..++..|+..|.  +     |+++++++  ++++....++...... -..  ....+  ++..+   
T Consensus         4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~-~~~--~~~~~--~~~~~---   75 (333)
T 5mdh_A            4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALP-LLK--DVIAT--DKEEI---   75 (333)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCT-TEE--EEEEE--SCHHH---
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhc-ccC--CEEEc--CCcHH---
Confidence            4699999999999999999998885  5     99999975  4666666677553111 111  11111  11111   


Q ss_pred             HHHHHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCC-eEEEEcCCcc
Q 017812          131 SLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPS-RIVNVTSFTH  205 (365)
Q Consensus       131 ~~~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g-~iV~vsS~~~  205 (365)
                                .....|++|+.||.... +..+   -.+.++.|......+.+.+..+    ...+ +++++|-...
T Consensus        76 ----------~~~daDvVvitAg~prk-pG~t---R~dll~~N~~i~~~i~~~i~~~----~~~~~~vivvsNPvd  133 (333)
T 5mdh_A           76 ----------AFKDLDVAILVGSMPRR-DGME---RKDLLKANVKIFKCQGAALDKY----AKKSVKVIVVGNPAN  133 (333)
T ss_dssp             ----------HTTTCSEEEECCSCCCC-TTCC---TTTTHHHHHHHHHHHHHHHHHH----SCTTCEEEECSSSHH
T ss_pred             ----------HhCCCCEEEEeCCCCCC-CCCC---HHHHHHHHHHHHHHHHHHHHHh----CCCCeEEEEcCCchH
Confidence                      12458999999997532 2222   2346777887766666655444    2245 6888886543

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=96.90  E-value=0.0055  Score=56.93  Aligned_cols=102  Identities=14%  Similarity=0.123  Sum_probs=66.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      .|++|+|+|+ |+||...+..+...|+ +|+.+++++++++.+. ++     +... +  +|..+.+ +   .+++.+. 
T Consensus       190 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~-~l-----Ga~~-v--i~~~~~~-~---~~~~~~~-  254 (371)
T 1f8f_A          190 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAK-QL-----GATH-V--INSKTQD-P---VAAIKEI-  254 (371)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH-HH-----TCSE-E--EETTTSC-H---HHHHHHH-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-Hc-----CCCE-E--ecCCccC-H---HHHHHHh-
Confidence            4789999995 8999999888888899 7999999988766543 33     3221 2  3444332 2   2223221 


Q ss_pred             hccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017812          137 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  204 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~  204 (365)
                          ..+++|++|.++|..                       ...+..++.++.   .|++|.++...
T Consensus       255 ----~~gg~D~vid~~g~~-----------------------~~~~~~~~~l~~---~G~iv~~G~~~  292 (371)
T 1f8f_A          255 ----TDGGVNFALESTGSP-----------------------EILKQGVDALGI---LGKIAVVGAPQ  292 (371)
T ss_dssp             ----TTSCEEEEEECSCCH-----------------------HHHHHHHHTEEE---EEEEEECCCCS
T ss_pred             ----cCCCCcEEEECCCCH-----------------------HHHHHHHHHHhc---CCEEEEeCCCC
Confidence                224799999999841                       123344555544   48999988654

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=96.90  E-value=0.0054  Score=57.02  Aligned_cols=74  Identities=19%  Similarity=0.171  Sum_probs=53.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .|.+|+|+|+ |+||...+..+...|++|+++++++++++.+. ++     +..   ..+|..+.+.+    +++     
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~-~l-----Ga~---~vi~~~~~~~~----~~~-----  254 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAK-AL-----GAD---EVVNSRNADEM----AAH-----  254 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HH-----TCS---EEEETTCHHHH----HTT-----
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc-----CCc---EEeccccHHHH----HHh-----
Confidence            4789999998 89999999888889999999999998876554 33     322   12455553322    111     


Q ss_pred             ccCCCCCeeEEEecCCc
Q 017812          138 DSDMHSSIQLLINNAGI  154 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~  154 (365)
                          .+++|++|.++|.
T Consensus       255 ----~~g~Dvvid~~g~  267 (369)
T 1uuf_A          255 ----LKSFDFILNTVAA  267 (369)
T ss_dssp             ----TTCEEEEEECCSS
T ss_pred             ----hcCCCEEEECCCC
Confidence                1469999999985

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=96.87  E-value=0.0056  Score=57.45  Aligned_cols=80  Identities=19%  Similarity=0.136  Sum_probs=54.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      .|++|+|+|+ |++|...+..+...|+ +|+++++++++++.+. ++     +..    .+|.++.+.+.+.+.++.   
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~-~l-----Ga~----~i~~~~~~~~~~~v~~~t---  250 (398)
T 1kol_A          185 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAK-AQ-----GFE----IADLSLDTPLHEQIAALL---  250 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HT-----TCE----EEETTSSSCHHHHHHHHH---
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHH-Hc-----CCc----EEccCCcchHHHHHHHHh---
Confidence            4789999995 9999998888888899 7999999988776543 22     332    245554433322222221   


Q ss_pred             hccCCCCCeeEEEecCCcc
Q 017812          137 LDSDMHSSIQLLINNAGIL  155 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~  155 (365)
                          ...++|++|.++|..
T Consensus       251 ----~g~g~Dvvid~~G~~  265 (398)
T 1kol_A          251 ----GEPEVDCAVDAVGFE  265 (398)
T ss_dssp             ----SSSCEEEEEECCCTT
T ss_pred             ----CCCCCCEEEECCCCc
Confidence                124699999999963

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=96.84  E-value=0.037  Score=50.73  Aligned_cols=122  Identities=13%  Similarity=0.085  Sum_probs=72.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCC-------EEEEEecCch--hHHHHHHHHHhhcCCCceEEEEecCCChhhHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGF-------HVVLVGRSSH--LLSETMADITSRNKDARLEAFQVDLSSFQSVL  126 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~-------~Vil~~r~~~--~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~  126 (365)
                      .+..-.|.||||+|+||..++..|+....       .+.+.+.++.  +++-+.-++..............  ++..   
T Consensus        21 s~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~--~~~~---   95 (345)
T 4h7p_A           21 SMSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVT--ADPR---   95 (345)
T ss_dssp             -CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEE--SCHH---
T ss_pred             CCCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEc--CChH---
Confidence            35566899999999999999999998653       6999998763  45555556654321222222222  1211   


Q ss_pred             HHHHHHHHHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcC-CCCCeEEEEcCC
Q 017812          127 KFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNS-PVPSRIVNVTSF  203 (365)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~-~~~g~iV~vsS~  203 (365)
                      +             ....-|++|..||+... +.++.+   +.++.|.-=.    +.+.+.+.+. .+...|+.+|-.
T Consensus        96 ~-------------a~~~advVvi~aG~prk-pGmtR~---DLl~~Na~I~----~~~~~~i~~~a~~~~~vlvvsNP  152 (345)
T 4h7p_A           96 V-------------AFDGVAIAIMCGAFPRK-AGMERK---DLLEMNARIF----KEQGEAIAAVAASDCRVVVVGNP  152 (345)
T ss_dssp             H-------------HTTTCSEEEECCCCCCC-TTCCHH---HHHHHHHHHH----HHHHHHHHHHSCTTCEEEECSSS
T ss_pred             H-------------HhCCCCEEEECCCCCCC-CCCCHH---HHHHHhHHHH----HHHHHHHHhhccCceEEEEeCCC
Confidence            1             12458999999998532 334443   3566776544    4444444432 113566667654

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=96.79  E-value=0.015  Score=53.90  Aligned_cols=45  Identities=16%  Similarity=0.130  Sum_probs=40.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMA  101 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~  101 (365)
                      .+.+++|+|.|+ |.+|..+|+.+...|++|++.+|+.++++.+.+
T Consensus       181 ~v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~  225 (381)
T 3p2y_A          181 TVKPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS  225 (381)
T ss_dssp             EECCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH
T ss_pred             CcCCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence            467899999999 789999999999999999999999988776643

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=96.78  E-value=0.0022  Score=56.76  Aligned_cols=43  Identities=28%  Similarity=0.373  Sum_probs=39.7

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHH
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADI  103 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l  103 (365)
                      +|+++|.|+ ||.|++++..|++.|.+|+++.|+.++++++. ++
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~  160 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RL  160 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HC
Confidence            789999997 99999999999999999999999999988877 54

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=96.77  E-value=0.0022  Score=59.11  Aligned_cols=93  Identities=18%  Similarity=0.154  Sum_probs=64.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .|++|+|+|+ |+||...+..+...|++|+++++++++.+.+.+ +     +....+     ++.+.+.           
T Consensus       176 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-l-----Ga~~v~-----~~~~~~~-----------  232 (348)
T 3two_A          176 KGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDALS-M-----GVKHFY-----TDPKQCK-----------  232 (348)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHH-T-----TCSEEE-----SSGGGCC-----------
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHh-c-----CCCeec-----CCHHHHh-----------
Confidence            4889999997 999999998888899999999999988765432 2     333222     3433221           


Q ss_pred             ccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017812          138 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  204 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~  204 (365)
                           .++|+++.++|...                       ..+..+..++.   .|++|.++...
T Consensus       233 -----~~~D~vid~~g~~~-----------------------~~~~~~~~l~~---~G~iv~~G~~~  268 (348)
T 3two_A          233 -----EELDFIISTIPTHY-----------------------DLKDYLKLLTY---NGDLALVGLPP  268 (348)
T ss_dssp             -----SCEEEEEECCCSCC-----------------------CHHHHHTTEEE---EEEEEECCCCC
T ss_pred             -----cCCCEEEECCCcHH-----------------------HHHHHHHHHhc---CCEEEEECCCC
Confidence                 26999999998521                       12234444444   58999997654

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=96.75  E-value=0.029  Score=50.88  Aligned_cols=119  Identities=13%  Similarity=0.188  Sum_probs=73.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhhcC--CCceEEEEecCCChhhHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRNK--DARLEAFQVDLSSFQSVLKFKDSLQ  133 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~--~Vil~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dls~~~~v~~~~~~~~  133 (365)
                      +...|.|+|| |.+|..++..|+.+|.  .|++.+.++++++....++....+  +..+.+.. |  +.+.         
T Consensus         5 ~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-~--~~~a---------   71 (317)
T 3d0o_A            5 KGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKA-G--EYSD---------   71 (317)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEE-C--CGGG---------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEe-C--CHHH---------
Confidence            4467999999 9999999999999984  899999998877765555543211  12233322 2  2222         


Q ss_pred             HHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017812          134 QWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  205 (365)
Q Consensus       134 ~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~  205 (365)
                              ...-|++|..+|..... ..+.+   +.+..|.--.    +.+.+.+.+....+.|+++|-...
T Consensus        72 --------~~~aDvVvi~ag~~~~~-g~~r~---dl~~~n~~i~----~~i~~~i~~~~p~a~viv~tNPv~  127 (317)
T 3d0o_A           72 --------CHDADLVVICAGAAQKP-GETRL---DLVSKNLKIF----KSIVGEVMASKFDGIFLVATNPVD  127 (317)
T ss_dssp             --------GTTCSEEEECCCCCCCT-TCCHH---HHHHHHHHHH----HHHHHHHHHTTCCSEEEECSSSHH
T ss_pred             --------hCCCCEEEECCCCCCCC-CCcHH---HHHHHHHHHH----HHHHHHHHHhCCCcEEEEecCcHH
Confidence                    24589999999985322 22322   3344554443    444444444333678888765443

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=96.75  E-value=0.0058  Score=57.40  Aligned_cols=79  Identities=18%  Similarity=0.195  Sum_probs=53.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      .|++|+|+|+ |+||...+..+...|+ +|+++++++++++.+. +   .  +.  .  .+|..+.+.+.+.+.++.   
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~---l--Ga--~--~i~~~~~~~~~~~~~~~~---  250 (398)
T 2dph_A          185 PGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLLS-D---A--GF--E--TIDLRNSAPLRDQIDQIL---  250 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH-T---T--TC--E--EEETTSSSCHHHHHHHHH---
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-H---c--CC--c--EEcCCCcchHHHHHHHHh---
Confidence            4889999997 9999998888878899 9999999988765432 2   2  33  2  245554332122222221   


Q ss_pred             hccCCCCCeeEEEecCCc
Q 017812          137 LDSDMHSSIQLLINNAGI  154 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~  154 (365)
                          ...++|++|.++|.
T Consensus       251 ----~g~g~Dvvid~~g~  264 (398)
T 2dph_A          251 ----GKPEVDCGVDAVGF  264 (398)
T ss_dssp             ----SSSCEEEEEECSCT
T ss_pred             ----CCCCCCEEEECCCC
Confidence                12369999999985

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=96.71  E-value=0.031  Score=50.69  Aligned_cols=117  Identities=15%  Similarity=0.218  Sum_probs=71.8

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhhcC--CCceEEEEecCCChhhHHHHHHHHHH
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRNK--DARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~--~Vil~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      .+.|.|+|+ |.+|..+|..|+..|.  +|++.++++++++....++....+  +..+.+.. |  +.+.          
T Consensus         6 ~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~-~--~~~a----------   71 (316)
T 1ldn_A            6 GARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWH-G--DYDD----------   71 (316)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEE-C--CGGG----------
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEc-C--cHHH----------
Confidence            357999999 9999999999999885  899999998877665566654322  11233332 2  2221          


Q ss_pred             HHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017812          135 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  204 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~  204 (365)
                             ....|++|..+|+..... .+.+   +.+..|.    -+.+.+.+.+.+....+.++++|-..
T Consensus        72 -------l~~aDvViia~~~~~~~g-~~r~---dl~~~n~----~i~~~i~~~i~~~~p~a~~iv~tNPv  126 (316)
T 1ldn_A           72 -------CRDADLVVICAGANQKPG-ETRL---DLVDKNI----AIFRSIVESVMASGFQGLFLVATNPV  126 (316)
T ss_dssp             -------TTTCSEEEECCSCCCCTT-TCSG---GGHHHHH----HHHHHHHHHHHHHTCCSEEEECSSSH
T ss_pred             -------hCCCCEEEEcCCCCCCCC-CCHH---HHHHcCh----HHHHHHHHHHHHHCCCCEEEEeCCch
Confidence                   245899999999864322 2221   2344443    34444444444433356777765543

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=96.70  E-value=0.022  Score=50.99  Aligned_cols=115  Identities=16%  Similarity=0.170  Sum_probs=75.1

Q ss_pred             EEEecCCChHHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhhcC--CCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           62 CIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRNK--DARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        62 vlITGassGIG~~~a~~la~~G~--~Vil~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      |.|+|| |+||..+|..|+.+|.  ++++.+.++++.+....++....+  +........  .|.+.+            
T Consensus         3 V~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~--~d~~~~------------   67 (294)
T 2x0j_A            3 LGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYSLL------------   67 (294)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEE--SCGGGG------------
T ss_pred             EEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecC--CCHHHh------------
Confidence            678895 9999999999999884  899999999887777777755311  122222222  122221            


Q ss_pred             ccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017812          138 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  204 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~  204 (365)
                           ..-|++|..||+... +.++.+   +.++.|.-    +.+.+.+.+.+....+.++.+|-..
T Consensus        68 -----~~aDvVvitAG~prk-pGmtR~---dLl~~Na~----I~~~i~~~i~~~~p~aivlvvsNPv  121 (294)
T 2x0j_A           68 -----KGSEIIVVTAGLARK-PGMTRL---DLAHKNAG----IIKDIAKKIVENAPESKILVVTNPM  121 (294)
T ss_dssp             -----TTCSEEEECCCCCCC-SSSCHH---HHHHHHHH----HHHHHHHHHHTTSTTCEEEECSSSH
T ss_pred             -----CCCCEEEEecCCCCC-CCCchH---HHHHHHHH----HHHHHHHHHHhcCCceEEEEecCcc
Confidence                 347999999998533 334443   34666654    5555556556555467788877654

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=96.69  E-value=0.032  Score=50.48  Aligned_cols=117  Identities=20%  Similarity=0.200  Sum_probs=74.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHCC--CEEEEEecCchhHHHHHHHHHhhcC-CCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           61 VCIVTGATSGLGAAAAYALSREG--FHVVLVGRSSHLLSETMADITSRNK-DARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G--~~Vil~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .+.|+|| |.+|..++..|+..+  .+|++.++++++++....++....+ ...+.+.. |  +.+.             
T Consensus         2 KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~-~--~~~a-------------   64 (310)
T 2xxj_A            2 KVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWA-G--SYGD-------------   64 (310)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEE-C--CGGG-------------
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEE-C--CHHH-------------
Confidence            5889998 999999999999998  4899999999888877777755321 11222222 2  2222             


Q ss_pred             ccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccc
Q 017812          138 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHR  206 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~  206 (365)
                          ...-|++|..+|..... ..+.+   +.+..|.--...+    .+.+.+....+.|+++|-....
T Consensus        65 ----~~~aD~Vii~ag~~~~~-g~~r~---dl~~~n~~i~~~i----~~~i~~~~p~a~iiv~tNPv~~  121 (310)
T 2xxj_A           65 ----LEGARAVVLAAGVAQRP-GETRL---QLLDRNAQVFAQV----VPRVLEAAPEAVLLVATNPVDV  121 (310)
T ss_dssp             ----GTTEEEEEECCCCCCCT-TCCHH---HHHHHHHHHHHHH----HHHHHHHCTTCEEEECSSSHHH
T ss_pred             ----hCCCCEEEECCCCCCCC-CcCHH---HHHHhhHHHHHHH----HHHHHHHCCCcEEEEecCchHH
Confidence                14589999999985332 23333   2345555444444    4444433336888888765543

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=96.69  E-value=0.025  Score=51.57  Aligned_cols=120  Identities=13%  Similarity=0.157  Sum_probs=74.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhhcC-CCceEEEEecCCChhhHHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRNK-DARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~--~Vil~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      +...|.|+|| |.+|..++..|+..+.  .|++.++++++++....++....+ ...+.+.. |  +.+.          
T Consensus         8 ~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~-~--~~~a----------   73 (326)
T 2zqz_A            8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYS-A--EYSD----------   73 (326)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C--CGGG----------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEE-C--CHHH----------
Confidence            3467999999 9999999999999885  899999999888877777755321 12222322 2  2222          


Q ss_pred             HHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccc
Q 017812          135 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHR  206 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~  206 (365)
                             ...-|++|..+|..... ..+.+   +.+..|.--...+.+.+    .+....+.|+++|-....
T Consensus        74 -------~~~aDvVii~ag~~~k~-g~~R~---dl~~~n~~i~~~i~~~i----~~~~p~a~iiv~tNPv~~  130 (326)
T 2zqz_A           74 -------AKDADLVVITAGAPQKP-GETRL---DLVNKNLKILKSIVDPI----VDSGFNGIFLVAANPVDI  130 (326)
T ss_dssp             -------GGGCSEEEECCCCC------CHH---HHHHHHHHHHHHHHHHH----HHHTCCSEEEECSSSHHH
T ss_pred             -------hCCCCEEEEcCCCCCCC-CCCHH---HHHHHHHHHHHHHHHHH----HHHCCCeEEEEeCCcHHH
Confidence                   13489999999985322 22222   33455554444444444    333336888888765543

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=96.65  E-value=0.0033  Score=53.36  Aligned_cols=43  Identities=23%  Similarity=0.309  Sum_probs=37.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHH
Q 017812           61 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADI  103 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l  103 (365)
                      ++.|+||+|.+|.++++.|++.|++|++++|++++.++..+++
T Consensus         2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~   44 (212)
T 1jay_A            2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEY   44 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHH
T ss_pred             eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh
Confidence            4889999999999999999999999999999988877665543

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=96.63  E-value=0.0033  Score=54.37  Aligned_cols=72  Identities=11%  Similarity=-0.012  Sum_probs=55.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhc
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  138 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~  138 (365)
                      .+.++|.|+ |.+|..+|+.|.+.|+ |+++++++++.+++.     .    .+.++..|.++++.+++.          
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-----~----~~~~i~gd~~~~~~l~~a----------   67 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR-----S----GANFVHGDPTRVSDLEKA----------   67 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-----T----TCEEEESCTTCHHHHHHT----------
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-----c----CCeEEEcCCCCHHHHHhc----------
Confidence            457899998 8999999999999999 999999988765433     1    367889999998765442          


Q ss_pred             cCCCCCeeEEEecCC
Q 017812          139 SDMHSSIQLLINNAG  153 (365)
Q Consensus       139 ~~~~~~id~lv~nAG  153 (365)
                        .....|.+|...+
T Consensus        68 --~i~~ad~vi~~~~   80 (234)
T 2aef_A           68 --NVRGARAVIVDLE   80 (234)
T ss_dssp             --TCTTCSEEEECCS
T ss_pred             --CcchhcEEEEcCC
Confidence              2245788887664

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=96.63  E-value=0.0008  Score=59.99  Aligned_cols=43  Identities=19%  Similarity=0.248  Sum_probs=37.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSET   99 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~   99 (365)
                      ++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++++++
T Consensus       114 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~l  157 (277)
T 3don_A          114 GIEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNW  157 (277)
T ss_dssp             TGGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTC
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHH
Confidence            367899999997 7999999999999999 999999998875543

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=96.60  E-value=0.042  Score=49.62  Aligned_cols=45  Identities=18%  Similarity=0.200  Sum_probs=38.5

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHh
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITS  105 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~  105 (365)
                      +.|.|+|| |.+|..++..|+..|. +|++.++++++++....++..
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~   48 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYE   48 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHT
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHH
Confidence            46899999 9999999999999996 999999999888766666544

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=96.56  E-value=0.064  Score=48.93  Aligned_cols=121  Identities=14%  Similarity=0.126  Sum_probs=69.9

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhc----CCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRN----KDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~----~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      ..|.|.|| |.+|.++|..|+..|. +|+++++++++++....++....    ...++...    +|.+   +.   +  
T Consensus        10 ~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t----~d~~---ea---~--   76 (331)
T 1pzg_A           10 KKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE----YSYE---AA---L--   76 (331)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEE----CSHH---HH---H--
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEe----CCHH---HH---h--
Confidence            46889998 9999999999999998 99999999988877555443321    11222211    2222   11   1  


Q ss_pred             HHhccCCCCCeeEEEecCCcccCCCC-CCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017812          135 WLLDSDMHSSIQLLINNAGILATSSR-LTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  205 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~~~~~-~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~  205 (365)
                              ..-|++|..+|....... .+.-.-.+.+..|.--...+.+.+.++    ...+.++++|-...
T Consensus        77 --------~~aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~----~p~a~vi~~tNP~~  136 (331)
T 1pzg_A           77 --------TGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKY----CPKTFIIVVTNPLD  136 (331)
T ss_dssp             --------TTCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHH----CTTCEEEECCSSHH
T ss_pred             --------CCCCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHH----CCCcEEEEEcCchH
Confidence                    248999999997532211 000001223444444444444444433    22467766655443

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=96.55  E-value=0.033  Score=50.37  Aligned_cols=118  Identities=16%  Similarity=0.212  Sum_probs=72.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhhcC--CCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           61 VCIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRNK--DARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G~--~Vil~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      .+.|+|+ |.+|..+|..|+..|.  .|++.++++++++....++....+  ...+.+...|  +.+.            
T Consensus         2 kv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~--~~~a------------   66 (314)
T 3nep_X            2 KVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTN--DYGP------------   66 (314)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEES--SSGG------------
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECC--CHHH------------
Confidence            4788997 9999999999999997  999999999887766666654210  1122222122  2221            


Q ss_pred             hccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccc
Q 017812          137 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHR  206 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~  206 (365)
                           ...-|++|..||..... .++.   .+.++.|.-    +.+.+.+.+.+....+.++++|-....
T Consensus        67 -----~~~aDvVii~ag~~~kp-G~~R---~dl~~~N~~----i~~~i~~~i~~~~p~a~vivvtNPvd~  123 (314)
T 3nep_X           67 -----TEDSDVCIITAGLPRSP-GMSR---DDLLAKNTE----IVGGVTEQFVEGSPDSTIIVVANPLDV  123 (314)
T ss_dssp             -----GTTCSEEEECCCC--------C---HHHHHHHHH----HHHHHHHHHHTTCTTCEEEECCSSHHH
T ss_pred             -----hCCCCEEEECCCCCCCC-CCCH---HHHHHhhHH----HHHHHHHHHHHhCCCcEEEecCCchhH
Confidence                 24589999999985322 2222   234555554    345555555554446888888875543

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=96.54  E-value=0.034  Score=50.41  Aligned_cols=118  Identities=12%  Similarity=0.210  Sum_probs=73.4

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhhcC-CCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRNK-DARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~--~Vil~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      ..|.|+|| |.+|..++..|+..+.  .|++.++++++++....++....+ ...+.+.. |  +.+.            
T Consensus         6 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~-~--~~~a------------   69 (318)
T 1ez4_A            6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYS-G--EYSD------------   69 (318)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEE-C--CGGG------------
T ss_pred             CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEE-C--CHHH------------
Confidence            57999999 9999999999999886  899999999988877777755421 12222222 2  2222            


Q ss_pred             hccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccc
Q 017812          137 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHR  206 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~  206 (365)
                           ...-|++|..+|..... ..+.   .+.+..|.-    +.+.+.+.+.+....+.|+++|-....
T Consensus        70 -----~~~aDvVii~ag~~~~~-g~~R---~dl~~~n~~----i~~~i~~~i~~~~p~a~iiv~tNPv~~  126 (318)
T 1ez4_A           70 -----CKDADLVVITAGAPQKP-GESR---LDLVNKNLN----ILSSIVKPVVDSGFDGIFLVAANPVDI  126 (318)
T ss_dssp             -----GTTCSEEEECCCC--------------CHHHHHH----HHHHHHHHHHHTTCCSEEEECSSSHHH
T ss_pred             -----hCCCCEEEECCCCCCCC-CCCH---HHHHHHHHH----HHHHHHHHHHHhCCCeEEEEeCCcHHH
Confidence                 24589999999985322 1121   123444444    444445555444446888888765543

>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*

Probab=96.53  E-value=0.0049  Score=58.42  Aligned_cols=80  Identities=15%  Similarity=0.260  Sum_probs=62.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCc-------------------hhHHHHHHHHHhhcCCCceEEEEe
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSS-------------------HLLSETMADITSRNKDARLEAFQV  117 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~~  117 (365)
                      ++..|+|.|+ ||+|.++++.|+..|. ++.+++.+.                   .+.+.+.+.+.+.+|..++..+..
T Consensus        39 ~~~~VlvvG~-GGlGs~va~~La~aGvg~i~ivD~D~Ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~lnp~v~v~~~~~  117 (434)
T 1tt5_B           39 DTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFN  117 (434)
T ss_dssp             HTCCEEEECS-STHHHHHHHHHHHTTCCCEEEEECCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEEES
T ss_pred             cCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEcCCEechhccCCCcCCChhHcCcHHHHHHHHHHHhhCCCCEEEEEec
Confidence            5778999997 7899999999999997 899996532                   478888888988888888888888


Q ss_pred             cCCChhhHHHHHHHHHHHHhccCCCCCeeEEEecCC
Q 017812          118 DLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAG  153 (365)
Q Consensus       118 Dls~~~~v~~~~~~~~~~~~~~~~~~~id~lv~nAG  153 (365)
                      ++++..  ..++             ...|++|++..
T Consensus       118 ~i~~~~--~~~~-------------~~~DlVi~~~D  138 (434)
T 1tt5_B          118 KIQDFN--DTFY-------------RQFHIIVCGLD  138 (434)
T ss_dssp             CGGGBC--HHHH-------------TTCSEEEECCS
T ss_pred             ccchhh--HHHh-------------cCCCEEEECCC
Confidence            776532  1221             34899997753

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=96.47  E-value=0.021  Score=52.27  Aligned_cols=79  Identities=22%  Similarity=0.242  Sum_probs=52.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCE-EEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFH-VVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~-Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      .|++|+|+|| ||+|...+..+...|++ ++.+++++++++.+ +++     +...   ..|.++.+ ..+..+++.   
T Consensus       160 ~g~~VlV~Ga-G~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a-~~l-----Ga~~---~i~~~~~~-~~~~~~~~~---  225 (346)
T 4a2c_A          160 ENKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKLALA-KSF-----GAMQ---TFNSSEMS-APQMQSVLR---  225 (346)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HHT-----TCSE---EEETTTSC-HHHHHHHHG---
T ss_pred             CCCEEEEECC-CCcchHHHHHHHHcCCcEEEEEechHHHHHHH-HHc-----CCeE---EEeCCCCC-HHHHHHhhc---
Confidence            5889999987 89999999888899985 56788888776443 232     3222   23444433 223333332   


Q ss_pred             hccCCCCCeeEEEecCCc
Q 017812          137 LDSDMHSSIQLLINNAGI  154 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~  154 (365)
                          .....|+++.++|.
T Consensus       226 ----~~~g~d~v~d~~G~  239 (346)
T 4a2c_A          226 ----ELRFNQLILETAGV  239 (346)
T ss_dssp             ----GGCSSEEEEECSCS
T ss_pred             ----ccCCcccccccccc
Confidence                23568999999885

>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A

Probab=96.41  E-value=0.006  Score=60.36  Aligned_cols=83  Identities=18%  Similarity=0.268  Sum_probs=63.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCc-------------------hhHHHHHHHHHhhcCCCceEEEE
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSS-------------------HLLSETMADITSRNKDARLEAFQ  116 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~  116 (365)
                      +++..|+|.|+ ||+|.++++.|+..|. ++.+++.+.                   .+.+.+.+.+.+.+|..++..+.
T Consensus        15 L~~s~VlVVGa-GGLGsevak~La~aGVG~ItlvD~D~Ve~SNLnRQflf~~~dVGk~KAeaaa~~L~~iNP~v~V~a~~   93 (640)
T 1y8q_B           15 VAGGRVLVVGA-GGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESVLQFYPKANIVAYH   93 (640)
T ss_dssp             HHHCEEEEECC-SHHHHHHHHHHHHHTCCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHTTCTTCEEEEEE
T ss_pred             HhcCeEEEECc-CHHHHHHHHHHHHcCCCeEEEecCCEEChhhcCCCcCCChhHcChHHHHHHHHHHHHHCCCCeEEEEe
Confidence            45678999998 8899999999999997 999998742                   46777888888888888999998


Q ss_pred             ecCCChhhHHHHHHHHHHHHhccCCCCCeeEEEecCC
Q 017812          117 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAG  153 (365)
Q Consensus       117 ~Dls~~~~v~~~~~~~~~~~~~~~~~~~id~lv~nAG  153 (365)
                      .+++.......++             ...|++|++..
T Consensus        94 ~~i~~~~~~~~~~-------------~~~DlVvda~D  117 (640)
T 1y8q_B           94 DSIMNPDYNVEFF-------------RQFILVMNALD  117 (640)
T ss_dssp             SCTTSTTSCHHHH-------------TTCSEEEECCS
T ss_pred             cccchhhhhHhhh-------------cCCCEEEECCC
Confidence            8886533111221             35899988744

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=96.40  E-value=0.0063  Score=56.28  Aligned_cols=47  Identities=19%  Similarity=0.257  Sum_probs=41.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADI  103 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l  103 (365)
                      +++||+|+|.|+ |.+|..+|+.|.+.|++|++.+++.+++++..++.
T Consensus       170 ~L~GktV~V~G~-G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~  216 (364)
T 1leh_A          170 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEE  216 (364)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred             CCCcCEEEEECc-hHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHc
Confidence            478999999997 78999999999999999999999988877766654

>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}

Probab=96.39  E-value=0.054  Score=48.89  Aligned_cols=114  Identities=20%  Similarity=0.260  Sum_probs=71.6

Q ss_pred             EEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhh----cCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           62 CIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSR----NKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        62 vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~----~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      |.|+|| |.+|..++..++..|. .|++.++++++++....++...    ....+++.. .|   .+.            
T Consensus         2 I~IiGa-G~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t-~d---~~a------------   64 (308)
T 2d4a_B            2 ITILGA-GKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGS-NS---YED------------   64 (308)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE-SC---GGG------------
T ss_pred             EEEECc-CHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEEC-CC---HHH------------
Confidence            778998 9999999999999887 7999999998887766666542    112223221 22   221            


Q ss_pred             hccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017812          137 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  205 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~  205 (365)
                           ....|++|..+|..... ..+.+   +.+..|.-    +.+.+.+.+.+....+.++++|-...
T Consensus        65 -----~~~aD~Vi~~ag~~~k~-G~~r~---dl~~~n~~----i~~~i~~~i~~~~p~a~iiv~tNPv~  120 (308)
T 2d4a_B           65 -----MRGSDIVLVTAGIGRKP-GMTRE---QLLEANAN----TMADLAEKIKAYAKDAIVVITTNPVD  120 (308)
T ss_dssp             -----GTTCSEEEECCSCCCCS-SCCTH---HHHHHHHH----HHHHHHHHHHHHCTTCEEEECCSSHH
T ss_pred             -----hCCCCEEEEeCCCCCCC-CCcHH---HHHHHHHH----HHHHHHHHHHHHCCCeEEEEeCCchH
Confidence                 13589999999985432 23332   23444443    44444454444323578888766443

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=96.37  E-value=0.062  Score=48.96  Aligned_cols=44  Identities=16%  Similarity=0.243  Sum_probs=37.6

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHH
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADIT  104 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~  104 (365)
                      +.|.|.|| |.+|..+|..|+..|. +|++.++++++++....++.
T Consensus        15 ~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~   59 (328)
T 2hjr_A           15 KKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLN   59 (328)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHH
Confidence            57899998 9999999999999998 99999999988876544443

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=96.32  E-value=0.057  Score=48.78  Aligned_cols=117  Identities=14%  Similarity=0.107  Sum_probs=72.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHC-C--CEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCC-hhhHHHHHHHHHHHH
Q 017812           61 VCIVTGATSGLGAAAAYALSRE-G--FHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSS-FQSVLKFKDSLQQWL  136 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~-G--~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~-~~~v~~~~~~~~~~~  136 (365)
                      .|.|+||+|.+|..++..|+.+ +  .+|++++.++ +.+....++...  ...+.+...--++ .+.            
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~--~~~~~v~~~~~~~~~~~------------   66 (312)
T 3hhp_A            2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHI--PTAVKIKGFSGEDATPA------------   66 (312)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTS--CSSEEEEEECSSCCHHH------------
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCC--CCCceEEEecCCCcHHH------------
Confidence            4889999999999999999986 5  3899999987 455445555443  1222222110011 111            


Q ss_pred             hccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017812          137 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  205 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~  205 (365)
                           ....|++|..||.... +.++.   .+.++.|.--...+.+.+..+    ...+.++++|-...
T Consensus        67 -----~~~aDivii~ag~~rk-pG~~R---~dll~~N~~I~~~i~~~i~~~----~p~a~vlvvtNPvd  122 (312)
T 3hhp_A           67 -----LEGADVVLISAGVARK-PGMDR---SDLFNVNAGIVKNLVQQVAKT----CPKACIGIITNPVN  122 (312)
T ss_dssp             -----HTTCSEEEECCSCSCC-TTCCH---HHHHHHHHHHHHHHHHHHHHH----CTTSEEEECSSCHH
T ss_pred             -----hCCCCEEEEeCCCCCC-CCCCH---HHHHHHHHHHHHHHHHHHHHH----CCCcEEEEecCcch
Confidence                 1358999999997532 23333   345667765555555555444    23578888876553

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=96.27  E-value=0.1  Score=47.42  Aligned_cols=119  Identities=13%  Similarity=0.164  Sum_probs=70.7

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhh----cCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSR----NKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~----~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      +.|.|.|| |.+|..+|..|+..|. +|++.++++++++....++...    ....++... .|   .+.          
T Consensus         5 ~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t-~d---~~a----------   69 (322)
T 1t2d_A            5 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGS-NT---YDD----------   69 (322)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEE-CC---GGG----------
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEEC-CC---HHH----------
Confidence            46889998 9999999999999998 9999999998887666665442    112222211 22   221          


Q ss_pred             HHhccCCCCCeeEEEecCCcccCCCCCC-HH-HHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017812          135 WLLDSDMHSSIQLLINNAGILATSSRLT-PE-GYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  205 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~~~~~~~-~~-~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~  205 (365)
                             ....|++|..+|+..... .+ .+ .-.+.+..|.--...+.+.+.++    ...+.++++|-...
T Consensus        70 -------l~~aD~Vi~a~g~p~k~g-~~~qe~~r~dl~~~n~~i~~~i~~~i~~~----~p~a~iiv~tNP~~  130 (322)
T 1t2d_A           70 -------LAGADVVIVTAGFTKAPG-KSDKEWNRDDLLPLNNKIMIEIGGHIKKN----CPNAFIIVVTNPVD  130 (322)
T ss_dssp             -------GTTCSEEEECCSCSSCTT-CCSTTCCGGGGHHHHHHHHHHHHHHHHHH----CTTSEEEECSSSHH
T ss_pred             -------hCCCCEEEEeCCCCCCCC-CCcccccHHHHHHHHHHHHHHHHHHHHHH----CCCeEEEEecCChH
Confidence                   134899999999753221 11 00 01123444444333344444333    22577777765443

>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*

Probab=96.27  E-value=0.0066  Score=55.87  Aligned_cols=64  Identities=16%  Similarity=0.257  Sum_probs=53.6

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecC-------------------chhHHHHHHHHHhhcCCCceEEEE
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRS-------------------SHLLSETMADITSRNKDARLEAFQ  116 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~  116 (365)
                      +++..|+|.|+ ||+|.++|+.|+..|. ++.+++.+                   ..+++.+.+.+.+.+|..++..+.
T Consensus        34 L~~~~VlivG~-GGlG~~ia~~La~~Gvg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~lnp~v~v~~~~  112 (346)
T 1y8q_A           34 LRASRVLLVGL-KGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLNPMVDVKVDT  112 (346)
T ss_dssp             HHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHTCTTSEEEEEC
T ss_pred             HhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhHCCCeEEEEEe
Confidence            56788999996 7899999999999998 89999643                   357888889999988888888887


Q ss_pred             ecCCC
Q 017812          117 VDLSS  121 (365)
Q Consensus       117 ~Dls~  121 (365)
                      .++++
T Consensus       113 ~~~~~  117 (346)
T 1y8q_A          113 EDIEK  117 (346)
T ss_dssp             SCGGG
T ss_pred             cccCc
Confidence            77654

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=96.25  E-value=0.0068  Score=54.93  Aligned_cols=68  Identities=15%  Similarity=0.183  Sum_probs=47.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .|++|+|+|| |++|...+..+...|++|+.++ ++++.+.+. ++     +.. +++  |  |.+.+            
T Consensus       142 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~-~l-----Ga~-~v~--~--d~~~v------------  196 (315)
T 3goh_A          142 KQREVLIVGF-GAVNNLLTQMLNNAGYVVDLVS-ASLSQALAA-KR-----GVR-HLY--R--EPSQV------------  196 (315)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHH-HH-----TEE-EEE--S--SGGGC------------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHH-Hc-----CCC-EEE--c--CHHHh------------
Confidence            4899999999 9999999988888999999999 777766543 33     322 222  3  21211            


Q ss_pred             ccCCCCCeeEEEecCCc
Q 017812          138 DSDMHSSIQLLINNAGI  154 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~  154 (365)
                          .+++|+++.++|.
T Consensus       197 ----~~g~Dvv~d~~g~  209 (315)
T 3goh_A          197 ----TQKYFAIFDAVNS  209 (315)
T ss_dssp             ----CSCEEEEECC---
T ss_pred             ----CCCccEEEECCCc
Confidence                2579999999985

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=96.25  E-value=0.063  Score=48.34  Aligned_cols=115  Identities=17%  Similarity=0.139  Sum_probs=66.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhhcC-CCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           61 VCIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRNK-DARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G~--~Vil~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .+.|.|| |.+|..+|..|+..|.  +|+++++++++++....++....+ .....+..   ++.+.             
T Consensus         2 kI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~---~~~~a-------------   64 (304)
T 2v6b_A            2 KVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWH---GGHSE-------------   64 (304)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEE---ECGGG-------------
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEE---CCHHH-------------
Confidence            5889998 9999999999999998  999999998877665555543221 01122221   12221             


Q ss_pred             ccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017812          138 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  204 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~  204 (365)
                          ....|++|..+|..... ..+   -.+.+..|.--...+.+.+.++    ...+.|+++|-..
T Consensus        65 ----~~~aDvVIi~~~~~~~~-g~~---r~dl~~~n~~i~~~i~~~i~~~----~p~~~vi~~tNP~  119 (304)
T 2v6b_A           65 ----LADAQVVILTAGANQKP-GES---RLDLLEKNADIFRELVPQITRA----APDAVLLVTSNPV  119 (304)
T ss_dssp             ----GTTCSEEEECC----------------CHHHHHHHHHHHHHHHHHH----CSSSEEEECSSSH
T ss_pred             ----hCCCCEEEEcCCCCCCC-CCc---HHHHHHhHHHHHHHHHHHHHHh----CCCeEEEEecCch
Confidence                13489999999874321 111   1234556665555555555554    1246777665544

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=96.24  E-value=0.034  Score=50.47  Aligned_cols=117  Identities=15%  Similarity=0.151  Sum_probs=69.6

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhhcC-CCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRNK-DARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~--~Vil~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      ..|.|+|+ |.+|..++..|+..|.  +|++.+.++++++....++....+ ...+.+. .  .+.+.            
T Consensus         8 ~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~--~~~~a------------   71 (318)
T 1y6j_A            8 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLY-A--GDYSD------------   71 (318)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CGGG------------
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEE-E--CCHHH------------
Confidence            45888898 9999999999999997  999999998877766666644321 1122221 1  12221            


Q ss_pred             hccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017812          137 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  205 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~  205 (365)
                           ...-|++|..+|..... ..+.   .+.+..|.--...+++.+.++    ...+.|+++|-...
T Consensus        72 -----~~~aDvVii~~g~p~k~-g~~r---~dl~~~n~~i~~~i~~~i~~~----~p~a~viv~tNPv~  127 (318)
T 1y6j_A           72 -----VKDCDVIVVTAGANRKP-GETR---LDLAKKNVMIAKEVTQNIMKY----YNHGVILVVSNPVD  127 (318)
T ss_dssp             -----GTTCSEEEECCCC-------CH---HHHHHHHHHHHHHHHHHHHHH----CCSCEEEECSSSHH
T ss_pred             -----hCCCCEEEEcCCCCCCC-CcCH---HHHHHhhHHHHHHHHHHHHHh----CCCcEEEEecCcHH
Confidence                 24589999999975321 2222   234666666555566655554    22577777655443

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=96.21  E-value=0.071  Score=48.25  Aligned_cols=117  Identities=15%  Similarity=0.135  Sum_probs=68.6

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhc----CCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRN----KDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~----~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      +.+.|.|| |.+|..+|..|++.|. +|++.++++++++....++....    ...++...    +|.+.          
T Consensus         5 ~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t----~d~~a----------   69 (317)
T 2ewd_A            5 RKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGT----DDYAD----------   69 (317)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEE----SCGGG----------
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEEC----CCHHH----------
Confidence            57889998 8999999999999998 99999999988776433332210    11222211    22211          


Q ss_pred             HHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccc
Q 017812          135 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHR  206 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~  206 (365)
                             ....|++|.++|+.... ..+.++   .+.-|.--.-.+.+.+.++    ...+.++++|.....
T Consensus        70 -------~~~aDiVi~avg~p~~~-g~~r~d---~~~~~~~i~~~i~~~i~~~----~~~~iii~~sNp~~~  126 (317)
T 2ewd_A           70 -------ISGSDVVIITASIPGRP-KDDRSE---LLFGNARILDSVAEGVKKY----CPNAFVICITNPLDV  126 (317)
T ss_dssp             -------GTTCSEEEECCCCSSCC-SSCGGG---GHHHHHHHHHHHHHHHHHH----CTTSEEEECCSSHHH
T ss_pred             -------hCCCCEEEEeCCCCCCC-CCcHHH---HHHhhHHHHHHHHHHHHHH----CCCcEEEEeCChHHH
Confidence                   13489999999975332 223322   2333333333344444443    224667777665443

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.19  E-value=0.011  Score=55.68  Aligned_cols=41  Identities=15%  Similarity=0.242  Sum_probs=35.8

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHH
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETM  100 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~  100 (365)
                      +..|+|.|+ |-+|..+++.|.+.|..|+++++++++.+++.
T Consensus         4 ~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~   44 (413)
T 3l9w_A            4 GMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLR   44 (413)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHH
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH
Confidence            346899997 77999999999999999999999998876654

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=96.16  E-value=0.0065  Score=53.84  Aligned_cols=38  Identities=18%  Similarity=0.247  Sum_probs=35.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCc
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS   93 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~   93 (365)
                      +++||+++|.|+|+-+|+.+|..|+.+|++|.++.|+.
T Consensus       157 ~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t  194 (285)
T 3p2o_A          157 DLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT  194 (285)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCc
Confidence            57899999999999999999999999999999988754

>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}

Probab=96.15  E-value=0.097  Score=43.95  Aligned_cols=77  Identities=12%  Similarity=0.104  Sum_probs=56.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .+.+||-.|++.|.   ++..+++.+.+|+.++.+++.++.+.+.+...+...++.++..|+.+.-.             
T Consensus        55 ~~~~vLDlGcG~G~---~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~-------------  118 (204)
T 3njr_A           55 RGELLWDIGGGSGS---VSVEWCLAGGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALA-------------  118 (204)
T ss_dssp             TTCEEEEETCTTCH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGT-------------
T ss_pred             CCCEEEEecCCCCH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcc-------------
Confidence            46789999987653   44555666899999999999988888877665433378999999876210             


Q ss_pred             ccCCCCCeeEEEecCC
Q 017812          138 DSDMHSSIQLLINNAG  153 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG  153 (365)
                         ....+|+++.+.+
T Consensus       119 ---~~~~~D~v~~~~~  131 (204)
T 3njr_A          119 ---DLPLPEAVFIGGG  131 (204)
T ss_dssp             ---TSCCCSEEEECSC
T ss_pred             ---cCCCCCEEEECCc
Confidence               1246899997764

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=96.09  E-value=0.034  Score=48.41  Aligned_cols=77  Identities=16%  Similarity=0.180  Sum_probs=57.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHC-CCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhcc
Q 017812           61 VCIVTGATSGLGAAAAYALSRE-GFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  139 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~-G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~  139 (365)
                      .|.|.|++|.+|+.+++.+.+. |+.|+.+....+.++++..    .  +.   =+.+|+++++.+...+..+.+     
T Consensus         2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~----~--~~---DvvIDfT~p~a~~~~~~~a~~-----   67 (245)
T 1p9l_A            2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTD----G--NT---EVVIDFTHPDVVMGNLEFLID-----   67 (245)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHH----T--TC---CEEEECSCTTTHHHHHHHHHH-----
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhc----c--CC---cEEEEccChHHHHHHHHHHHH-----
Confidence            4899999999999999999876 8898866554444433221    1  22   277899999999888887776     


Q ss_pred             CCCCCeeEEEecCCc
Q 017812          140 DMHSSIQLLINNAGI  154 (365)
Q Consensus       140 ~~~~~id~lv~nAG~  154 (365)
                         .++++++...|.
T Consensus        68 ---~g~~~VigTTG~   79 (245)
T 1p9l_A           68 ---NGIHAVVGTTGF   79 (245)
T ss_dssp             ---TTCEEEECCCCC
T ss_pred             ---cCCCEEEcCCCC
Confidence               468899988774

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=96.09  E-value=0.068  Score=48.48  Aligned_cols=116  Identities=17%  Similarity=0.226  Sum_probs=69.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhhcC-CCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           61 VCIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRNK-DARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G~--~Vil~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .+.|.|+ |.+|..+|..|++.|.  +|+++++++++++....++....+ .....+. .  +|.+.+            
T Consensus         2 kI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~-~--~d~~~~------------   65 (319)
T 1a5z_A            2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIY-A--GDYADL------------   65 (319)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEE-E--CCGGGG------------
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEE-e--CCHHHh------------
Confidence            4789998 9999999999999998  999999999888776655433211 0111111 1  232221            


Q ss_pred             ccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017812          138 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  205 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~  205 (365)
                           ...|++|.+++..... ..+..   +.+..|.--...+.+.+.++    ...+.||++|-...
T Consensus        66 -----~~aDvViiav~~~~~~-g~~r~---dl~~~n~~i~~~i~~~i~~~----~~~~~ii~~tNp~~  120 (319)
T 1a5z_A           66 -----KGSDVVIVAAGVPQKP-GETRL---QLLGRNARVMKEIARNVSKY----APDSIVIVVTNPVD  120 (319)
T ss_dssp             -----TTCSEEEECCCCCCCS-SCCHH---HHHHHHHHHHHHHHHHHHHH----CTTCEEEECSSSHH
T ss_pred             -----CCCCEEEEccCCCCCC-CCCHH---HHHHHHHHHHHHHHHHHHhh----CCCeEEEEeCCcHH
Confidence                 3489999999875421 22221   23444544444444444444    12467777665443

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=96.06  E-value=0.0064  Score=55.65  Aligned_cols=72  Identities=11%  Similarity=0.027  Sum_probs=56.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhc
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  138 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~  138 (365)
                      .+.++|.|+ |.+|+.++++|.++|. |+++++++++.+ ..+        ..+.++..|.+|++.+++.          
T Consensus       115 ~~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~--------~~~~~i~gd~~~~~~L~~a----------  173 (336)
T 1lnq_A          115 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK-VLR--------SGANFVHGDPTRVSDLEKA----------  173 (336)
T ss_dssp             -CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHH--------TTCEEEESCTTSHHHHHHT----------
T ss_pred             cCCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHh--------CCcEEEEeCCCCHHHHHhc----------
Confidence            467999997 8899999999999999 999999998775 321        2467899999998876543          


Q ss_pred             cCCCCCeeEEEecCC
Q 017812          139 SDMHSSIQLLINNAG  153 (365)
Q Consensus       139 ~~~~~~id~lv~nAG  153 (365)
                        ...+.|.+|...+
T Consensus       174 --~i~~a~~vi~~~~  186 (336)
T 1lnq_A          174 --NVRGARAVIVDLE  186 (336)
T ss_dssp             --CSTTEEEEEECCS
T ss_pred             --ChhhccEEEEcCC
Confidence              2346888887654

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=96.05  E-value=0.0053  Score=55.56  Aligned_cols=40  Identities=23%  Similarity=0.264  Sum_probs=36.2

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCch
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH   94 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~   94 (365)
                      .+++|++++|.|++.=+|+-+|+.|+..|++|++++|+..
T Consensus       173 ~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~  212 (320)
T 1edz_A          173 NRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNI  212 (320)
T ss_dssp             CTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEE
T ss_pred             CCCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchH
Confidence            3689999999999888899999999999999999999843

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=95.95  E-value=0.18  Score=45.50  Aligned_cols=115  Identities=17%  Similarity=0.206  Sum_probs=72.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHC--CCEEEEEecCchhHHHHHHHHHhh----cCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           61 VCIVTGATSGLGAAAAYALSRE--GFHVVLVGRSSHLLSETMADITSR----NKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~--G~~Vil~~r~~~~~~~~~~~l~~~----~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      .+.|.|+ |.+|..+|..|++.  |.+|+++++++++++....++...    ....++.. .   +|.+++         
T Consensus         2 kI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-t---~d~~~l---------   67 (310)
T 1guz_A            2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTG-S---NDYADT---------   67 (310)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEE-E---SCGGGG---------
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEE-C---CCHHHH---------
Confidence            4788998 99999999999996  689999999998887655444321    11112211 1   222211         


Q ss_pred             HHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcc
Q 017812          135 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTH  205 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~  205 (365)
                              ...|++|.++|.... ...+   -.+.+..|.--...+.+.+.++.    ..+.|++++-...
T Consensus        68 --------~~aDvViiav~~p~~-~g~~---r~dl~~~n~~i~~~i~~~i~~~~----~~~~viv~tNP~~  122 (310)
T 1guz_A           68 --------ANSDIVIITAGLPRK-PGMT---REDLLMKNAGIVKEVTDNIMKHS----KNPIIIVVSNPLD  122 (310)
T ss_dssp             --------TTCSEEEECCSCCCC-TTCC---HHHHHHHHHHHHHHHHHHHHHHC----SSCEEEECCSSHH
T ss_pred             --------CCCCEEEEeCCCCCC-CCCC---HHHHHHHHHHHHHHHHHHHHHhC----CCcEEEEEcCchH
Confidence                    348999999986422 1111   23456666666666666666652    2478888765443

>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*

Probab=95.89  E-value=0.079  Score=43.40  Aligned_cols=114  Identities=13%  Similarity=0.106  Sum_probs=68.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .+.+||=.|++.|.   ++..|++++.+|+.++.+++.++.+.+.+...+- .++.++..|..+....            
T Consensus        22 ~~~~vLDiGcG~G~---~~~~la~~~~~v~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~~~~~l~~~------------   85 (185)
T 3mti_A           22 DESIVVDATMGNGN---DTAFLAGLSKKVYAFDVQEQALGKTSQRLSDLGI-ENTELILDGHENLDHY------------   85 (185)
T ss_dssp             TTCEEEESCCTTSH---HHHHHHTTSSEEEEEESCHHHHHHHHHHHHHHTC-CCEEEEESCGGGGGGT------------
T ss_pred             CCCEEEEEcCCCCH---HHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEeCcHHHHHhh------------
Confidence            36789988887654   4455666689999999999998888888776543 5677777665543211            


Q ss_pred             ccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEc
Q 017812          138 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVT  201 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vs  201 (365)
                         ..+++|+++.|.+.......        .+..........++.+...++.   +|+++++.
T Consensus        86 ---~~~~fD~v~~~~~~~~~~~~--------~~~~~~~~~~~~l~~~~~~Lkp---gG~l~i~~  135 (185)
T 3mti_A           86 ---VREPIRAAIFNLGYLPSADK--------SVITKPHTTLEAIEKILDRLEV---GGRLAIMI  135 (185)
T ss_dssp             ---CCSCEEEEEEEEC-------------------CHHHHHHHHHHHHHHEEE---EEEEEEEE
T ss_pred             ---ccCCcCEEEEeCCCCCCcch--------hcccChhhHHHHHHHHHHhcCC---CcEEEEEE
Confidence               23579999988765322110        0011111223345666666654   47777654

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=95.87  E-value=0.016  Score=52.10  Aligned_cols=42  Identities=26%  Similarity=0.247  Sum_probs=37.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSE   98 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~   98 (365)
                      ++.|++++|.|+ |+||+++|+.|...|++|++.+|+.++.+.
T Consensus       154 ~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~  195 (300)
T 2rir_A          154 TIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLAR  195 (300)
T ss_dssp             CSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHH
T ss_pred             CCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence            578999999997 899999999999999999999999876544

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=95.86  E-value=0.041  Score=50.36  Aligned_cols=79  Identities=20%  Similarity=0.171  Sum_probs=49.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHC-CCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSRE-GFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~-G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      .|.+|+|+|| ||+|...+..++.. |++|+.+++++++++.+. ++     +...   ..|-++.+..++    +.+..
T Consensus       163 ~g~~VlV~Ga-G~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~-~~-----Ga~~---~i~~~~~~~~~~----v~~~t  228 (348)
T 4eez_A          163 PGDWQVIFGA-GGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAK-KI-----GADV---TINSGDVNPVDE----IKKIT  228 (348)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHH-HT-----TCSE---EEEC-CCCHHHH----HHHHT
T ss_pred             CCCEEEEEcC-CCccHHHHHHHHHhCCCEEEEEECcHHHhhhhh-hc-----CCeE---EEeCCCCCHHHH----hhhhc
Confidence            4789999987 77887777777765 679999999988764332 22     3222   235555443333    33221


Q ss_pred             hccCCCCCeeEEEecCCc
Q 017812          137 LDSDMHSSIQLLINNAGI  154 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~  154 (365)
                          ....+|.++.++|.
T Consensus       229 ----~g~g~d~~~~~~~~  242 (348)
T 4eez_A          229 ----GGLGVQSAIVCAVA  242 (348)
T ss_dssp             ----TSSCEEEEEECCSC
T ss_pred             ----CCCCceEEEEeccC
Confidence                22468888888874

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=95.86  E-value=0.019  Score=54.91  Aligned_cols=74  Identities=18%  Similarity=0.175  Sum_probs=58.5

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhcc
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  139 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~  139 (365)
                      ..++|.|+ |-+|..+|+.|.++|+.|+++++++++++++.+.+       .+.++..|-++++-++++           
T Consensus         4 M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~-------~~~~i~Gd~~~~~~L~~A-----------   64 (461)
T 4g65_A            4 MKIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY-------DLRVVNGHASHPDVLHEA-----------   64 (461)
T ss_dssp             EEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS-------SCEEEESCTTCHHHHHHH-----------
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc-------CcEEEEEcCCCHHHHHhc-----------
Confidence            35889988 56999999999999999999999998887665543       467889999998876654           


Q ss_pred             CCCCCeeEEEecCC
Q 017812          140 DMHSSIQLLINNAG  153 (365)
Q Consensus       140 ~~~~~id~lv~nAG  153 (365)
                       .-..-|++|...+
T Consensus        65 -gi~~ad~~ia~t~   77 (461)
T 4g65_A           65 -GAQDADMLVAVTN   77 (461)
T ss_dssp             -TTTTCSEEEECCS
T ss_pred             -CCCcCCEEEEEcC
Confidence             2345788886554

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=95.85  E-value=0.0063  Score=54.13  Aligned_cols=43  Identities=33%  Similarity=0.433  Sum_probs=37.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETM  100 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~  100 (365)
                      +++++++|.|+ |++|+++++.|.+.|++|++++|+.++++++.
T Consensus       127 ~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~  169 (275)
T 2hk9_A          127 VKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKLA  169 (275)
T ss_dssp             GGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHHT
T ss_pred             cCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHHH
Confidence            56889999996 79999999999999999999999987765543

>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}

Probab=95.84  E-value=0.038  Score=51.28  Aligned_cols=74  Identities=11%  Similarity=0.253  Sum_probs=54.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      ++||+||-.|+++||   ++...|+.|+ +|+.++.++ -++.+.+.++..+-..+++++..|+.+.+            
T Consensus        82 ~~~k~VLDvG~GtGi---Ls~~Aa~aGA~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~------------  145 (376)
T 4hc4_A           82 LRGKTVLDVGAGTGI---LSIFCAQAGARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVE------------  145 (376)
T ss_dssp             HTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCC------------
T ss_pred             cCCCEEEEeCCCccH---HHHHHHHhCCCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeec------------
Confidence            579999999999986   3555678897 899999875 45555444444444678999999998753            


Q ss_pred             HhccCCCCCeeEEEec
Q 017812          136 LLDSDMHSSIQLLINN  151 (365)
Q Consensus       136 ~~~~~~~~~id~lv~n  151 (365)
                           ...++|++|..
T Consensus       146 -----lpe~~DvivsE  156 (376)
T 4hc4_A          146 -----LPEQVDAIVSE  156 (376)
T ss_dssp             -----CSSCEEEEECC
T ss_pred             -----CCccccEEEee
Confidence                 23579999974

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=95.83  E-value=0.0015  Score=60.09  Aligned_cols=39  Identities=13%  Similarity=0.278  Sum_probs=35.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchh
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHL   95 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~   95 (365)
                      +++||++.|.| .|.||..+|+.+.+.|++|++.+++.++
T Consensus       172 ~L~GktV~I~G-~GnVG~~~A~~l~~~GakVvvsD~~~~~  210 (355)
T 1c1d_A          172 SLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTER  210 (355)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             CCCCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEEeCCccH
Confidence            57899999997 5889999999999999999988888654

>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}

Probab=95.81  E-value=0.0048  Score=57.92  Aligned_cols=46  Identities=22%  Similarity=0.306  Sum_probs=38.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEE-EEec----------CchhHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVV-LVGR----------SSHLLSETMAD  102 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vi-l~~r----------~~~~~~~~~~~  102 (365)
                      +++|++|+|+| .|.+|..+|+.|.+.|++|+ +.++          +.+.+.+..++
T Consensus       215 ~l~gk~vaVqG-~GnVG~~~a~~L~~~GakVVavsD~~G~i~dp~Gld~~~l~~~~~~  271 (419)
T 3aoe_E          215 DLRGARVVVQG-LGQVGAAVALHAERLGMRVVAVATSMGGMYAPEGLDVAEVLSAYEA  271 (419)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHH
T ss_pred             CccCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEEEcCCCeEECCCCCCHHHHHHHHHh
Confidence            57899999999 78899999999999999999 6677          55666555554

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=95.74  E-value=0.018  Score=50.69  Aligned_cols=36  Identities=8%  Similarity=0.168  Sum_probs=33.6

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecC
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRS   92 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~   92 (365)
                      ++||+++|.|+|+-+|+.+|+.|..+|++|+++.++
T Consensus       148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~  183 (276)
T 3ngx_A          148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSK  183 (276)
T ss_dssp             CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCC
Confidence            689999999999999999999999999999998764

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=95.73  E-value=0.0062  Score=62.47  Aligned_cols=36  Identities=22%  Similarity=0.221  Sum_probs=32.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCc
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS   93 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~   93 (365)
                      .|++|+|.||+||+|...+......|++|+.++++.
T Consensus       345 ~G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~~~~  380 (795)
T 3slk_A          345 PGESLLVHSAAGGVGMAAIQLARHLGAEVYATASED  380 (795)
T ss_dssp             TTCCEEEESTTBHHHHHHHHHHHHTTCCEEEECCGG
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeChH
Confidence            589999999999999999988888999999998765

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=95.72  E-value=0.015  Score=51.14  Aligned_cols=46  Identities=28%  Similarity=0.420  Sum_probs=39.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADI  103 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l  103 (365)
                      +++| +++|.|+ |++|+++++.|.+.|++|++++|+.++.+++.+++
T Consensus       114 ~l~~-~v~iiG~-G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~  159 (263)
T 2d5c_A          114 PLKG-PALVLGA-GGAGRAVAFALREAGLEVWVWNRTPQRALALAEEF  159 (263)
T ss_dssp             CCCS-CEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHH
T ss_pred             CCCC-eEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh
Confidence            3678 8999997 78999999999999999999999988877766554

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=95.65  E-value=0.023  Score=50.98  Aligned_cols=42  Identities=26%  Similarity=0.304  Sum_probs=37.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSE   98 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~   98 (365)
                      ++.|++++|.|+ |+||+++|+.+...|++|++.+|+.++.+.
T Consensus       152 ~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~  193 (293)
T 3d4o_A          152 TIHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLLAR  193 (293)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHH
T ss_pred             CCCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHHHH
Confidence            478999999995 899999999999999999999999876544

>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2

Probab=95.62  E-value=0.064  Score=51.39  Aligned_cols=130  Identities=11%  Similarity=0.014  Sum_probs=73.9

Q ss_pred             CCEEEEecCCC-hHHHHHHHHHHHC----CCEEEEEecCchhHHHHHHHHHhh--cCCCceEEEEecCCChhhHHHHHHH
Q 017812           59 RPVCIVTGATS-GLGAAAAYALSRE----GFHVVLVGRSSHLLSETMADITSR--NKDARLEAFQVDLSSFQSVLKFKDS  131 (365)
Q Consensus        59 ~k~vlITGass-GIG~~~a~~la~~----G~~Vil~~r~~~~~~~~~~~l~~~--~~~~~~~~~~~Dls~~~~v~~~~~~  131 (365)
                      ...|.|.||++ |.|.++|..|++.    |.+|++.++++++++.+.+.....  ..+....+...  +|.+   +.+  
T Consensus         3 ~~KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~~e~l~~~~~~~~~~l~~~~~~~~I~~t--tD~~---eal--   75 (480)
T 1obb_A            3 SVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKT--MNLD---DVI--   75 (480)
T ss_dssp             CCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEE--SCHH---HHH--
T ss_pred             CCEEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCcEEEEE--CCHH---HHh--
Confidence            35688999999 8999999999864    789999999999877755543321  11111122111  2321   111  


Q ss_pred             HHHHHhccCCCCCeeEEEecCCcccCCCCCCHHHH----------hHhHHH--------HhHHHHHHHHHHhHhhhcCCC
Q 017812          132 LQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGY----------DQMMST--------NYIGAFFLTKLLLPLLKNSPV  193 (365)
Q Consensus       132 ~~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~----------~~~~~v--------N~~~~~~l~~~~l~~~~~~~~  193 (365)
                                 ..-|++|..+|+.........+.+          +++...        ...-++-+++.+.+.+.+...
T Consensus        76 -----------~dAD~VIiaagv~~~~~~~~dE~ip~K~g~~~~l~dt~g~g~~~~G~~~~~rni~i~~~i~~~i~~~~P  144 (480)
T 1obb_A           76 -----------IDADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSP  144 (480)
T ss_dssp             -----------TTCSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCT
T ss_pred             -----------CCCCEEEECCCcccccccccccccccccccccchhhhcCCccchhhhHHhhhhHHHHHHHHHHHHHHCC
Confidence                       248999999986321000000000          111111        133344566666676666554


Q ss_pred             CCeEEEEcCCccc
Q 017812          194 PSRIVNVTSFTHR  206 (365)
Q Consensus       194 ~g~iV~vsS~~~~  206 (365)
                      .+-++++|-....
T Consensus       145 ~A~ii~~TNPvdi  157 (480)
T 1obb_A          145 KAWYLQAANPIFE  157 (480)
T ss_dssp             TCEEEECSSCHHH
T ss_pred             CeEEEEeCCcHHH
Confidence            6778877776654

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=95.60  E-value=0.018  Score=50.93  Aligned_cols=37  Identities=24%  Similarity=0.257  Sum_probs=34.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecC
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRS   92 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~   92 (365)
                      +++||.++|.|+|+-+|+.+|..|+.+|++|.++.+.
T Consensus       158 ~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~  194 (286)
T 4a5o_A          158 DLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRF  194 (286)
T ss_dssp             CCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC
Confidence            4789999999999989999999999999999998764

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=95.58  E-value=0.012  Score=51.54  Aligned_cols=41  Identities=29%  Similarity=0.430  Sum_probs=36.1

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSET   99 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~   99 (365)
                      +++ +++|.|+ ||.|++++..|++.|+ +|++++|+.++++++
T Consensus       107 ~~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~l  148 (253)
T 3u62_A          107 VKE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKAL  148 (253)
T ss_dssp             CCS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTC
T ss_pred             CCC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHH
Confidence            567 8999997 8999999999999998 999999998876554

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=95.53  E-value=0.023  Score=50.70  Aligned_cols=38  Identities=24%  Similarity=0.301  Sum_probs=34.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCc
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS   93 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~   93 (365)
                      +++||.++|.|+|+-+|+.+|..|.++|++|.++.|..
T Consensus       162 ~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T  199 (300)
T 4a26_A          162 EMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGT  199 (300)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTS
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCC
Confidence            47899999999999899999999999999999998743

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=95.50  E-value=0.054  Score=49.12  Aligned_cols=42  Identities=14%  Similarity=0.197  Sum_probs=35.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETM  100 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~  100 (365)
                      +.+++.|.|+ |.+|..+|+.|++.|++|++.+|++++.+++.
T Consensus        30 ~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~   71 (320)
T 4dll_A           30 YARKITFLGT-GSMGLPMARRLCEAGYALQVWNRTPARAASLA   71 (320)
T ss_dssp             CCSEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CCCEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHH
Confidence            4567777766 78999999999999999999999998877654

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=95.49  E-value=0.018  Score=50.96  Aligned_cols=37  Identities=19%  Similarity=0.187  Sum_probs=34.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecC
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRS   92 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~   92 (365)
                      +++||.++|.|+|+-+|+.+|..|..+|++|+++.|+
T Consensus       158 ~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~  194 (285)
T 3l07_A          158 KTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRF  194 (285)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC
Confidence            4789999999999989999999999999999988764

>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}

Probab=95.49  E-value=0.12  Score=45.00  Aligned_cols=81  Identities=14%  Similarity=0.186  Sum_probs=59.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      .+++||=-|+++|.   ++..+++++. +|+.++.+++.++.+.+.+.......++.++..|+.+....      +    
T Consensus        49 ~~~~vLDlG~G~G~---~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~------~----  115 (259)
T 3lpm_A           49 RKGKIIDLCSGNGI---IPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDL------I----  115 (259)
T ss_dssp             SCCEEEETTCTTTH---HHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGT------S----
T ss_pred             CCCEEEEcCCchhH---HHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhh------h----
Confidence            36788888887663   4455666665 99999999999888888887665455799999999875420      0    


Q ss_pred             hccCCCCCeeEEEecCCcc
Q 017812          137 LDSDMHSSIQLLINNAGIL  155 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~  155 (365)
                          ..+.+|+++.|....
T Consensus       116 ----~~~~fD~Ii~npPy~  130 (259)
T 3lpm_A          116 ----PKERADIVTCNPPYF  130 (259)
T ss_dssp             ----CTTCEEEEEECCCC-
T ss_pred             ----ccCCccEEEECCCCC
Confidence                236799999997654

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=95.43  E-value=0.044  Score=50.29  Aligned_cols=99  Identities=16%  Similarity=0.094  Sum_probs=56.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCC-CEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREG-FHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G-~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      .|++|+|+||+|++|...+......| ++|+.++ +.++.+.+.     .  +.. ++  .| .+.+ ..+   ++++. 
T Consensus       142 ~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~-----~--ga~-~~--~~-~~~~-~~~---~~~~~-  204 (349)
T 4a27_A          142 EGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK-----D--SVT-HL--FD-RNAD-YVQ---EVKRI-  204 (349)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG-----G--GSS-EE--EE-TTSC-HHH---HHHHH-
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH-----c--CCc-EE--Ec-CCcc-HHH---HHHHh-
Confidence            48999999999999998777665565 6888887 444443322     2  222 12  23 3322 222   22221 


Q ss_pred             hccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017812          137 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  204 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~  204 (365)
                          ..+++|+++.+.|...                        ++..+..++.   .|++|.++...
T Consensus       205 ----~~~g~Dvv~d~~g~~~------------------------~~~~~~~l~~---~G~~v~~G~~~  241 (349)
T 4a27_A          205 ----SAEGVDIVLDCLCGDN------------------------TGKGLSLLKP---LGTYILYGSSN  241 (349)
T ss_dssp             ----CTTCEEEEEEECC-------------------------------CTTEEE---EEEEEEEC---
T ss_pred             ----cCCCceEEEECCCchh------------------------HHHHHHHhhc---CCEEEEECCCc
Confidence                2357999999998510                        1234455544   58999998754

>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*

Probab=95.42  E-value=0.36  Score=43.07  Aligned_cols=100  Identities=14%  Similarity=0.092  Sum_probs=69.0

Q ss_pred             CCCEEEEecCCCh-HHHHHHHHHHH-CCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           58 KRPVCIVTGATSG-LGAAAAYALSR-EGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        58 ~~k~vlITGassG-IG~~~a~~la~-~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      .+.+||..|++.| +...+   +++ .|++|+.++.+++.++.+.+.+...+- .++.++..|..+..            
T Consensus       122 ~g~rVLDIGcG~G~~ta~~---lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl-~~v~~v~gDa~~l~------------  185 (298)
T 3fpf_A          122 RGERAVFIGGGPLPLTGIL---LSHVYGMRVNVVEIEPDIAELSRKVIEGLGV-DGVNVITGDETVID------------  185 (298)
T ss_dssp             TTCEEEEECCCSSCHHHHH---HHHTTCCEEEEEESSHHHHHHHHHHHHHHTC-CSEEEEESCGGGGG------------
T ss_pred             CcCEEEEECCCccHHHHHH---HHHccCCEEEEEECCHHHHHHHHHHHHhcCC-CCeEEEECchhhCC------------
Confidence            4789999999753 33222   233 589999999999999988888877654 68999999987632            


Q ss_pred             HhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcC
Q 017812          136 LLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS  202 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS  202 (365)
                            .++.|+++.++.+.      +              ...+.+.+.+.++.   +|++++...
T Consensus       186 ------d~~FDvV~~~a~~~------d--------------~~~~l~el~r~LkP---GG~Lvv~~~  223 (298)
T 3fpf_A          186 ------GLEFDVLMVAALAE------P--------------KRRVFRNIHRYVDT---ETRIIYRTY  223 (298)
T ss_dssp             ------GCCCSEEEECTTCS------C--------------HHHHHHHHHHHCCT---TCEEEEEEC
T ss_pred             ------CCCcCEEEECCCcc------C--------------HHHHHHHHHHHcCC---CcEEEEEcC
Confidence                  15699999766520      0              12344455555543   588887664

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	365
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	4e-33
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	2e-31
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	8e-30
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	4e-29
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	3e-26
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	3e-26
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	4e-26
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	6e-26
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	1e-24
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	5e-24
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	6e-24
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	7e-24
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	9e-24
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	2e-23
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	5e-23
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	7e-23
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	2e-22
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	2e-22
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	5e-22
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	3e-21
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	3e-21
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	6e-21
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	2e-20
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	2e-20
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	3e-20
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	5e-20
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	6e-20
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	7e-20
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	1e-19
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	8e-19
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	2e-18
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	8e-18
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	9e-18
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	1e-17
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	2e-17
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	3e-17
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	9e-17
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	9e-17
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	2e-16
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	3e-16
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	4e-16
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	6e-16
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	2e-15
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-15
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	4e-15
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	7e-15
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	2e-14
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	4e-14
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	5e-14
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	6e-14
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	9e-14
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	1e-13
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	1e-13
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	6e-12
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	2e-11
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	3e-11
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	4e-11
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	5e-11
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	1e-10
d1e7wa_	284	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	4e-10
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	5e-09
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	6e-09
d1uh5a_	329	c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite	5e-08
d1jaya_	212	c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase	3e-07
d1luaa1	191	c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter	3e-07
d2h7ma1	268	c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri	1e-06
d2pd4a1	274	c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte	2e-06
d1d7oa_	297	c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B	3e-06
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	4e-04
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	0.001
d2voua1	265	c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydr	0.004

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  122 bits (307), Expect = 4e-33
 Identities = 62/291 (21%), Positives = 105/291 (36%), Gaps = 49/291 (16%)

Query: 61  VCIVTGATSGLGAAAAYALSRE-GFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDL 119
           V +VTG   G+G A    L R     VVL  R        +  + +     R    Q+D+
Sbjct: 5   VALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPR--FHQLDI 62

Query: 120 SSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGA 177
              QS+   +D L++       +  + +L+NNAGI    +         +  M TN+ G 
Sbjct: 63  DDLQSIRALRDFLRKE------YGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGT 116

Query: 178 FFLTKLLLPLLKNS---PVPSRIVNVTSFTHRNVFNAQ---------------VNNETIT 219
             +   LLPL+K        S I++V +    +    Q               +N     
Sbjct: 117 RDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVED 176

Query: 220 GKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLD-KSRHVSVIAADPGVVKTNIMRE 278
            K  +  K    +  Y  +K+ + + S    R L    K   + + A  PG V+T++   
Sbjct: 177 TKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP 236

Query: 279 VPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGV---YFFGGK 326
                              +SPE+G  + +  AL PP+  G    +    +
Sbjct: 237 KA----------------TKSPEEGAETPVYLALLPPDAEGPHGQFVSEKR 271

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  117 bits (295), Expect = 2e-31
 Identities = 48/223 (21%), Positives = 89/223 (39%), Gaps = 28/223 (12%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           + +VTGA+ G+GAA A AL ++G  VV   R+   + E  A+  S      L  ++ DLS
Sbjct: 12  LALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLS 71

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGAF 178
           + + +L    +++        HS + + INNAG+    +    +  G+  M + N +   
Sbjct: 72  NEEDILSMFSAIRSQ------HSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALS 125

Query: 179 FLTKLLLPLLKNSPVPS-RIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEY 237
             T+     +K   V    I+N+ S +   V    V +     K+ + +      +    
Sbjct: 126 ICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELRE 185

Query: 238 SKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP 280
           ++                    H+      PGVV+T    ++ 
Sbjct: 186 AQ-------------------THIRATCISPGVVETQFAFKLH 209

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  113 bits (282), Expect = 8e-30
 Identities = 49/266 (18%), Positives = 94/266 (35%), Gaps = 37/266 (13%)

Query: 63  IVTGATSGLGAAAAYALSREG--FHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           +VTGA  G+G      L ++    H++   R     +E  +      KD+R+    + ++
Sbjct: 7   VVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI-----KDSRVHVLPLTVT 61

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL---TPEGYDQMMSTNYIGA 177
             +S+    D+    + +      + LLINNAG+L +             + +  N    
Sbjct: 62  CDKSL----DTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSV 117

Query: 178 FFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEY 237
             LT+ LLPLLKN+        ++      +  +                       Y  
Sbjct: 118 VLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDN---TSGSAQFPVLAYRM 174

Query: 238 SKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLL 297
           SK  + +F   L  +L      +V V+   PG V+TN+  +  +                
Sbjct: 175 SKAAINMFGRTLAVDLK---DDNVLVVNFCPGWVQTNLGGKNAAL--------------- 216

Query: 298 QSPEKGINSVLDAALAP-PETSGVYF 322
            + E+    ++ +        +G +F
Sbjct: 217 -TVEQSTAELISSFNKLDNSHNGRFF 241

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  110 bits (277), Expect = 4e-29
 Identities = 50/258 (19%), Positives = 87/258 (33%), Gaps = 42/258 (16%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           + ++TGA  G+G   AY  ++    +VL   + H L ET A    +   A++  F VD S
Sbjct: 9   IVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKC--KGLGAKVHTFVVDCS 66

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNA--GILATSSRLTPEGYDQMMSTNYIGAF 178
           + + +      ++  + D  +      L+NNA     +          ++    N +  F
Sbjct: 67  NREDIYSSAKKVKAEIGDVSI------LVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHF 120

Query: 179 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYS 238
           + TK  LP +  +     IV V S          +                     Y  S
Sbjct: 121 WTTKAFLPAMTKNN-HGHIVTVASAAGHVSVPFLLA--------------------YCSS 159

Query: 239 KLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQ 298
           K   + F   L   L   +   V      P  V T  ++   +            LG   
Sbjct: 160 KFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNPSTS-----------LGPTL 208

Query: 299 SPEKGINSVLDAALAPPE 316
            PE+ +N ++   L   +
Sbjct: 209 EPEEVVNRLMHGILTEQK 226

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  103 bits (259), Expect = 3e-26
 Identities = 43/226 (19%), Positives = 82/226 (36%), Gaps = 37/226 (16%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRN-KDARLEAFQVDL 119
           V I+TG+++G+G A A   +REG  V + GR +  L ET   I +    +  + +   D+
Sbjct: 7   VAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADV 66

Query: 120 SSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI------LATSSRLTPEGYDQMMSTN 173
           ++     +   +             + +L+NNAG         T +  + E YD  ++ N
Sbjct: 67  TTDAGQDEILSTTLGK------FGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLN 120

Query: 174 YIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCAR 233
                 LTK  +P L ++      ++  +                           P   
Sbjct: 121 LRSVIALTKKAVPHLSSTKGEIVNISSIASGLH---------------------ATPDFP 159

Query: 234 IYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV 279
            Y  +K  +  ++     +L       + V +  PG+V T     +
Sbjct: 160 YYSIAKAAIDQYTRNTAIDLI---QHGIRVNSISPGLVATGFGSAM 202

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score =  103 bits (257), Expect = 3e-26
 Identities = 57/243 (23%), Positives = 94/243 (38%), Gaps = 32/243 (13%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V I+TG T G+G A A     EG  V++ GR S +  +    +       +++ FQ D S
Sbjct: 8   VAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSV---GTPDQIQFFQHDSS 64

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATS--SRLTPEGYDQMMSTNYIGAF 178
                 K  D+ +           +  L+NNAGI         T   + ++++ N  G F
Sbjct: 65  DEDGWTKLFDATE------KAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVF 118

Query: 179 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYS 238
           F T+L +  +KN  + + I+N++S                           P    Y  S
Sbjct: 119 FGTRLGIQRMKNKGLGASIINMSSIEGFVGD--------------------PSLGAYNAS 158

Query: 239 KLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQ 298
           K  + I S     +  L K   V V    PG +KT ++ ++P     M+      +G + 
Sbjct: 159 KGAVRIMSKSAALDCAL-KDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGHIG 217

Query: 299 SPE 301
            P 
Sbjct: 218 EPN 220

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  102 bits (256), Expect = 4e-26
 Identities = 48/253 (18%), Positives = 85/253 (33%), Gaps = 35/253 (13%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V +VTGA  G+G A A AL  +G  V LV  +     +  A +  + +  +    Q D++
Sbjct: 5   VALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVA 64

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFL 180
             Q +      +            + +L+NNAG+         + +++ +  N +     
Sbjct: 65  DQQQLRDTFRKVVDH------FGRLDILVNNAGV------NNEKNWEKTLQINLVSVISG 112

Query: 181 TKLLLPLLK--NSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYS 238
           T L L  +   N      I+N++S         Q               C     I  ++
Sbjct: 113 TYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVY------------CASKHGIVGFT 160

Query: 239 KLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQ 298
           +   L  +  L           V + A  PG V T I+  +    ++  +   K      
Sbjct: 161 RSAAL--AANLMN-------SGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDM 211

Query: 299 SPEKGINSVLDAA 311
               GI      A
Sbjct: 212 IKYYGILDPPLIA 224

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score =  102 bits (255), Expect = 6e-26
 Identities = 47/223 (21%), Positives = 84/223 (37%), Gaps = 33/223 (14%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
             +VTG + G+G      L+  G  V    R+   L++ +     R+K  ++EA   DLS
Sbjct: 10  TALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQW--RSKGFKVEASVCDLS 67

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGAF 178
           S     +  +++      +  H  + +L+NNAGI+        T E Y  +MS N+  A+
Sbjct: 68  SRSERQELMNTVA-----NHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAY 122

Query: 179 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYS 238
            L+ L  P LK S   + +   +                            P   +Y  +
Sbjct: 123 HLSVLAHPFLKASERGNVVFISSVSGAL---------------------AVPYEAVYGAT 161

Query: 239 KLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS 281
           K  +   +  L          ++ V    PGV+ T+++     
Sbjct: 162 KGAMDQLTRCLAFEWA---KDNIRVNGVGPGVIATSLVEMTIQ 201

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 98.9 bits (246), Expect = 1e-24
 Identities = 38/220 (17%), Positives = 73/220 (33%), Gaps = 36/220 (16%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V +VTG  SG+G      L  EG  V     +     +  A++  R+        + D+S
Sbjct: 8   VALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERS-----MFVRHDVS 62

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAF 178
           S         ++Q+         ++ +L+NNAGIL          E + +++  N    F
Sbjct: 63  SEADWTLVMAAVQRR------LGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVF 116

Query: 179 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYS 238
              +  +  +K       I+N+ S +                              Y  S
Sbjct: 117 IGCQQGIAAMKE--TGGSIINMASVSSWL--------------------PIEQYAGYSAS 154

Query: 239 KLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE 278
           K  +   +     +    +   + V +  P  + T +M+ 
Sbjct: 155 KAAVSALTRAAALSCR-KQGYAIRVNSIHPDGIYTPMMQA 193

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score = 97.4 bits (242), Expect = 5e-24
 Identities = 41/245 (16%), Positives = 78/245 (31%), Gaps = 40/245 (16%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
             I   A  G+G   +  L +      ++          +A++ + N    +     D++
Sbjct: 7   NVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP-TALAELKAINPKVNITFHTYDVT 65

Query: 121 -SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFF 179
                  K    +   L   D+       IN AGI      L     ++ ++ N+ G   
Sbjct: 66  VPVAESKKLLKKIFDQLKTVDIL------INGAGI------LDDHQIERTIAINFTGLVN 113

Query: 180 LTKLLLPLL--KNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEY 237
            T  +L     +       I N+ S T  N                          +Y  
Sbjct: 114 TTTAILDFWDKRKGGPGGIIANICSVTGFN--------------------AIHQVPVYSA 153

Query: 238 SKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLG-L 296
           SK  ++ F+  L +         V+  + +PG+ +T ++    S+L +       LL   
Sbjct: 154 SKAAVVSFTNSLAKLAP---ITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHP 210

Query: 297 LQSPE 301
            Q+ E
Sbjct: 211 TQTSE 215

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score = 96.9 bits (241), Expect = 6e-24
 Identities = 54/263 (20%), Positives = 92/263 (34%), Gaps = 39/263 (14%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           + ++TG  +G+G A A   + EG  + +        +E       RN   R+   + D+S
Sbjct: 7   LAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAI----RNLGRRVLTVKCDVS 62

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGAF 178
               V  F   +              +L+NNAGI        LT E + +    N    F
Sbjct: 63  QPGDVEAFGKQVIST------FGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGF 116

Query: 179 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYS 238
            + K  +P +K +    RI+N+TS T+                             Y  +
Sbjct: 117 LMAKAFVPGMKRNG-WGRIINLTSTTYWLKI--------------------EAYTHYIST 155

Query: 239 KLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAF-TVLKLLGLL 297
           K   + F+  L  +LG      ++V A  P +V+T                 +L+ +  L
Sbjct: 156 KAANIGFTRALASDLG---KDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRL 212

Query: 298 QSPEKGINSVLDAALAPPETSGV 320
           Q P     +     LA  + S +
Sbjct: 213 QVPLDLTGAAA--FLASDDASFI 233

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 97.0 bits (241), Expect = 7e-24
 Identities = 55/262 (20%), Positives = 87/262 (33%), Gaps = 35/262 (13%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
             +VTG T G+G A     +  G  +    R+ + L+E ++    + K  ++     D S
Sbjct: 10  TVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKW--QKKGFQVTGSVCDAS 67

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGAF 178
                 K   ++            + +LINN G + +      T E +   +STN   A+
Sbjct: 68  LRPEREKLMQTVSSMF-----GGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAY 122

Query: 179 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYS 238
            L++L  PLLK S   + I   +                                IY  +
Sbjct: 123 HLSQLAHPLLKASGCGNIIFMSSIAGVV---------------------SASVGSIYSAT 161

Query: 239 KLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQ 298
           K  L   +  L      D  R     A  P V+ T +   V            K LG   
Sbjct: 162 KGALNQLARNLACEWASDGIR---ANAVAPAVIATPLAEAVYDDEFKKVVISRKPLGRFG 218

Query: 299 SPEKGINSVLDAALAPPETSGV 320
            PE+  + V    L  P  S +
Sbjct: 219 EPEEVSSLVA--FLCMPAASYI 238

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 96.5 bits (240), Expect = 9e-24
 Identities = 47/249 (18%), Positives = 82/249 (32%), Gaps = 45/249 (18%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V +VTG   G+GA    A    G  VV+  +          ++              D++
Sbjct: 8   VVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGA------VFILCDVT 61

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL---TPEGYDQMMSTNYIGA 177
               V        +     D        +NNAG      R    + +G+ Q++  N +G 
Sbjct: 62  QEDDVKTLVSETIRRFGRLDCV------VNNAGHHPPPQRPEETSAQGFRQLLELNLLGT 115

Query: 178 FFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEY 237
           + LTKL LP L+ S     ++N++S          V                     Y  
Sbjct: 116 YTLTKLALPYLRKS--QGNVINISSLVGAIGQAQAVP--------------------YVA 153

Query: 238 SKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFL-----SLMAFTVLK 292
           +K  +   +  L  +        V V    PG + T +  E+ + +     S+    + +
Sbjct: 154 TKGAVTAMTKALALDES---PYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQ 210

Query: 293 LLGLLQSPE 301
            LG +  P 
Sbjct: 211 PLGRMGQPA 219

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 95.4 bits (237), Expect = 2e-23
 Identities = 53/223 (23%), Positives = 87/223 (39%), Gaps = 41/223 (18%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
             +VTGA  G+G     AL   G  VV V R++  L     +         +E   VDL 
Sbjct: 7   RALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPG------IEPVCVDLG 60

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGAF 178
            + +  K    +            + LL+NNA +  +     +T E +D+  S N    F
Sbjct: 61  DWDATEKALGGIGP----------VDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVF 110

Query: 179 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYS 238
            +++++   + N  VP  IVNV+S      F                    P    Y  +
Sbjct: 111 QVSQMVARDMINRGVPGSIVNVSSMVAHVTF--------------------PNLITYSST 150

Query: 239 KLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS 281
           K  + + +  +   LG  K R  SV   +P VV T++ ++V +
Sbjct: 151 KGAMTMLTKAMAMELGPHKIRVNSV---NPTVVLTDMGKKVSA 190

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.3 bits (234), Expect = 5e-23
 Identities = 54/263 (20%), Positives = 96/263 (36%), Gaps = 44/263 (16%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
             +VTGA  G+G     AL   G  VV V R+   L   + +         +E   VDL 
Sbjct: 9   RVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPG------IEPVCVDLG 62

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGAF 178
            +++  +   S+            + LL+NNA +        +T E +D+    N     
Sbjct: 63  DWEATERALGSVG----------PVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVI 112

Query: 179 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYS 238
            +++++   L    VP  IVNV+S   +                    +      +Y  +
Sbjct: 113 QVSQIVARGLIARGVPGAIVNVSSQCSQ--------------------RAVTNHSVYCST 152

Query: 239 KLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL-LGLL 297
           K  L + +  +   LG      + V A +P VV T++ +   S        + ++ LG  
Sbjct: 153 KGALDMLTKVMALELG---PHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKF 209

Query: 298 QSPEKGINSVLDAALAPPETSGV 320
              E  +N++L   L    +   
Sbjct: 210 AEVEHVVNAIL--FLLSDRSGMT 230

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 94.1 bits (233), Expect = 7e-23
 Identities = 52/276 (18%), Positives = 91/276 (32%), Gaps = 38/276 (13%)

Query: 56  GIKRPVCIVTGATSGLGAAAAYALSR---EGFHVVLVGRSSHLLSETMADITSRNKDARL 112
           G+   VC++TGA+ G G A A  L+R    G  +++  RS  +L +   ++ ++  D ++
Sbjct: 3   GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKV 62

Query: 113 EAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSR-----LTPEGYD 167
                DL +   V +   ++++            LLINNA  L   S+           +
Sbjct: 63  VLAAADLGTEAGVQRLLSAVRELPRPE--GLQRLLLINNAATLGDVSKGFLNVNDLAEVN 120

Query: 168 QMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSK 227
              + N      LT   L   ++SP  S+ V   S                        +
Sbjct: 121 NYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCAL-------------------Q 161

Query: 228 CYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLS--- 284
            Y    +Y   K    +    L       +   V V++  PG +  ++ +          
Sbjct: 162 PYKGWGLYCAGKAARDMLYQVLAA-----EEPSVRVLSYAPGPLDNDMQQLARETSKDPE 216

Query: 285 -LMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSG 319
                  LK  G L         +L         SG
Sbjct: 217 LRSKLQKLKSDGALVDCGTSAQKLLGLLQKDTFQSG 252

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 93.5 bits (232), Expect = 2e-22
 Identities = 44/226 (19%), Positives = 82/226 (36%), Gaps = 37/226 (16%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRN-KDARLEAFQVDL 119
             I+TG+++G+G   A   ++EG +V + GRSS  L ET   I      + ++ +   D+
Sbjct: 7   TVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADV 66

Query: 120 SSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAG------ILATSSRLTPEGYDQMMSTN 173
           ++     +  +S  +          I +L+NNAG         T +    + Y + +  N
Sbjct: 67  TTEDGQDQIINSTLKQ------FGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLN 120

Query: 174 YIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCAR 233
                 +TK + P L  S      V+      +                       P   
Sbjct: 121 LQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQA---------------------QPDFL 159

Query: 234 IYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV 279
            Y  +K  L  ++     +L       + V +  PG+V+T     +
Sbjct: 160 YYAIAKAALDQYTRSTAIDLA---KFGIRVNSVSPGMVETGFTNAM 202

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score = 92.6 bits (230), Expect = 2e-22
 Identities = 46/220 (20%), Positives = 71/220 (32%), Gaps = 40/220 (18%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
             +VTG   G+G A A A +REG  V L                   +      FQVDL 
Sbjct: 7   GVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVA--------EAIGGAFFQVDLE 58

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGAF 178
             +  ++F +              + +L+NNA I A  S   +    + +++  N     
Sbjct: 59  DERERVRFVEEAA------YALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPM 112

Query: 179 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYS 238
            L+ L    ++       IVNV S                                Y  S
Sbjct: 113 HLSALAAREMRKVGGG-AIVNVASVQGL--------------------FAEQENAAYNAS 151

Query: 239 KLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE 278
           K  L+  +  L  +L       + V A  PG + T  + E
Sbjct: 152 KGGLVNLTRSLALDLA---PLRIRVNAVAPGAIATEAVLE 188

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score = 91.6 bits (227), Expect = 5e-22
 Identities = 43/222 (19%), Positives = 74/222 (33%), Gaps = 37/222 (16%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
             I+TG   GLGA AA      G  VVL        + T  ++             +D++
Sbjct: 7   TVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL-----GDAARYQHLDVT 61

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAG--ILATSSRLTPEGYDQMMSTNYIGAF 178
             +   +     ++         S+  L+NNAG          + E + +++  N  G F
Sbjct: 62  IEEDWQRVVAYAREE------FGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVF 115

Query: 179 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYS 238
              K ++P +K++     IVN++S                                Y  S
Sbjct: 116 IGMKTVIPAMKDAG-GGSIVNISSAAGLM--------------------GLALTSSYGAS 154

Query: 239 KLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP 280
           K  +   S      LG   +  + V +  PG+  T +  E  
Sbjct: 155 KWGVRGLSKLAAVELG---TDRIRVNSVHPGMTYTPMTAETG 193

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score = 89.8 bits (222), Expect = 3e-21
 Identities = 46/222 (20%), Positives = 78/222 (35%), Gaps = 25/222 (11%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
             IVTG   G+G A   A++  G +V ++ RS+    E    +  +    + +A+Q D+S
Sbjct: 11  TIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKV-GKEFGVKTKAYQCDVS 69

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNA--GILATSSRLTPEGYDQMMSTNYIGAF 178
           +   V K    +            I  LI NA   ++  ++ LT E +  +   N  G F
Sbjct: 70  NTDIVTKTIQQIDAD------LGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVF 123

Query: 179 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYS 238
              + +  L         IV  +S + + +  + +N                    Y  S
Sbjct: 124 NTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLN-------------GSLTQVFYNSS 170

Query: 239 KLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP 280
           K         L        S  + V A  PG V T+    + 
Sbjct: 171 KAACSNLVKGLAAEWA---SAGIRVNALSPGYVNTDQTAHMD 209

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score = 89.3 bits (221), Expect = 3e-21
 Identities = 47/223 (21%), Positives = 84/223 (37%), Gaps = 32/223 (14%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V +VTG + GLG   A  L+  G  VV+  R+    SE    +T +       AF+ D+S
Sbjct: 7   VALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYG-VETMAFRCDVS 65

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGAF 178
           +++ V K  +++++          +  ++N AGI     +     + + Q++  N  G +
Sbjct: 66  NYEEVKKLLEAVKEK------FGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTY 119

Query: 179 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYS 238
           ++ +    LL+ S  PS I   +                            P    Y  S
Sbjct: 120 YVCREAFSLLRESDNPSIINIGSLTVEE--------------------VTMPNISAYAAS 159

Query: 239 KLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS 281
           K  +   +  L +  G      + V    PG  +T +   V S
Sbjct: 160 KGGVASLTKALAKEWG---RYGIRVNVIAPGWYRTKMTEAVFS 199

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.7 bits (222), Expect = 6e-21
 Identities = 40/223 (17%), Positives = 75/223 (33%), Gaps = 36/223 (16%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSR---NKDARLEAFQV 117
           V IVTG  +G+G A    L   G +VV+  R    L     ++ +     K AR+   Q 
Sbjct: 14  VAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQC 73

Query: 118 DLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYI 175
           ++ + + V     S             I  L+NN G   L+ +  ++ +G+  ++ TN  
Sbjct: 74  NIRNEEEVNNLVKSTLDT------FGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLT 127

Query: 176 GAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIY 235
           G F++ K +          S +  +                            +P A   
Sbjct: 128 GTFYMCKAVYSSWMKEHGGSIVNIIVPTKA----------------------GFPLAVHS 165

Query: 236 EYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE 278
             ++  +   +  L           + +    PGV+ +    E
Sbjct: 166 GAARAGVYNLTKSLALEWA---CSGIRINCVAPGVIYSQTAVE 205

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score = 87.8 bits (217), Expect = 2e-20
 Identities = 47/251 (18%), Positives = 86/251 (34%), Gaps = 44/251 (17%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V I+TG   G+G   A    R G  VV+   +     +   +I S +    +     D++
Sbjct: 8   VAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPD---VISFVHCDVT 64

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATS----SRLTPEGYDQMMSTNYIG 176
             + V    D+          H  + ++  N G+L+T+         E + ++M  N  G
Sbjct: 65  KDEDVRNLVDTTIAK------HGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYG 118

Query: 177 AFFLTKLLLP--LLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARI 234
           AF + K      +           +++SFT                           + +
Sbjct: 119 AFLVAKHAARVMIPAKKGSIVFTASISSFTAG----------------------EGVSHV 156

Query: 235 YEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV----PSFLSLMAFTV 290
           Y  +K  +L  +  L   LG      + V    P +V + ++ +V     S +  +A   
Sbjct: 157 YTATKHAVLGLTTSLCTELG---EYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQA 213

Query: 291 LKLLGLLQSPE 301
             L G L   E
Sbjct: 214 ANLKGTLLRAE 224

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 87.4 bits (216), Expect = 2e-20
 Identities = 41/225 (18%), Positives = 74/225 (32%), Gaps = 35/225 (15%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDA-RLEAFQVDL 119
             I+TG+++G+G +AA   ++EG  V + GR+   L ET   I      A ++ A   D+
Sbjct: 6   SVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADV 65

Query: 120 SSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL----TPEGYDQMMSTNYI 175
           +         ++             I +L+NNAG              E Y +    N+ 
Sbjct: 66  TEASGQDDIINTTLAK------FGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQ 119

Query: 176 GAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIY 235
               +T+                       +        +  + G      + +     Y
Sbjct: 120 AVIEMTQ----------------KTKEHLIKTKGEIVNVSSIVAGP-----QAHSGYPYY 158

Query: 236 EYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP 280
             +K  L  ++     +L       V V +  PG V T  M  + 
Sbjct: 159 ACAKAALDQYTRCTAIDLI---QHGVRVNSVSPGAVATGFMGAMG 200

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score = 87.4 bits (216), Expect = 3e-20
 Identities = 34/221 (15%), Positives = 66/221 (29%), Gaps = 32/221 (14%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
             ++TG  SGLG A       EG  V ++ +S+  L+E   D         +     D+ 
Sbjct: 7   AVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDH-----GDNVLGIVGDVR 61

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPE-GYDQMMSTNYIGAFF 179
           S +   +            D       + + +  L      + +  +D++   N  G   
Sbjct: 62  SLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIH 121

Query: 180 LTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSK 239
             K  LP L  S     ++   S                               +Y  +K
Sbjct: 122 AVKACLPALVAS--RGNVIFTISNAGFYP--------------------NGGGPLYTAAK 159

Query: 240 LCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP 280
             ++       R L  + + +V V     G + +++     
Sbjct: 160 HAIVGLV----RELAFELAPYVRVNGVGSGGINSDLRGPSS 196

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 87.0 bits (215), Expect = 5e-20
 Identities = 47/222 (21%), Positives = 77/222 (34%), Gaps = 28/222 (12%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V +VTGA  GLG A A A +  G  VV+                +      +        
Sbjct: 9   VVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAV 68

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGAF 178
           +    ++  + L +  LD+     I +++NNAGIL   S  R++ E +D +   +  G+F
Sbjct: 69  ANYDSVEAGEKLVKTALDT--FGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSF 126

Query: 179 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYS 238
            +T+     +K      RI+   S +       Q N                    Y  +
Sbjct: 127 QVTRAAWDHMKKQN-YGRIIMTASASGIYGNFGQAN--------------------YSAA 165

Query: 239 KLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP 280
           KL LL  +  L      +     + IA  P          +P
Sbjct: 166 KLGLLGLANTLVIEGRKNNIH-CNTIA--PNAGSRMTETVMP 204

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score = 85.6 bits (211), Expect = 6e-20
 Identities = 47/264 (17%), Positives = 86/264 (32%), Gaps = 47/264 (17%)

Query: 59  RPVCIVTGATSGLGAAAAYALSREGFH-------VVLVGRSSHLLSETMADITSRNKDAR 111
           + + ++TGA  G+G A A   +R   H       +VL  R++  L +   +   R + A 
Sbjct: 1   KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLEC--RAEGAL 58

Query: 112 LEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMS 171
            +    D+S    V +    + +     D   +   +     +       T E +D  M+
Sbjct: 59  TDTITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDL----TEEDFDYTMN 114

Query: 172 TNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPC 231
           TN  G FFLT+ L  L++           +    +   ++ +                  
Sbjct: 115 TNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYC---------------- 158

Query: 232 ARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVL 291
                 SK         +          +V +    PG V T +  +V            
Sbjct: 159 -----MSKFGQRGLVETMRLYAR---KCNVRITDVQPGAVYTPMWGKVDD---------- 200

Query: 292 KLLGLLQSPEKGINSVLDAALAPP 315
           ++  L+  PE     V+ A L P 
Sbjct: 201 EMQALMMMPEDIAAPVVQAYLQPS 224

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 85.5 bits (211), Expect = 7e-20
 Identities = 29/220 (13%), Positives = 55/220 (25%), Gaps = 41/220 (18%)

Query: 63  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 122
           IVT      G  +A  LS  G  V     S     E         +       Q+   S 
Sbjct: 4   IVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDEL--------EAFAETYPQLKPMSE 55

Query: 123 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI---LATSSRLTPEGYDQMMSTNYIGAFF 179
           Q   +  +++         +  + +L++N           +   E Y   +    I  F 
Sbjct: 56  QEPAELIEAVT------SAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFA 109

Query: 180 LTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSK 239
           L                          +    + +   I          +     Y  ++
Sbjct: 110 LV---------------------NAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSAR 148

Query: 240 LCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV 279
                 +  L + LG     ++ V A  P  + +      
Sbjct: 149 AGACTLANALSKELG---EYNIPVFAIGPNYLHSEDSPYF 185

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.6 bits (211), Expect = 1e-19
 Identities = 50/256 (19%), Positives = 81/256 (31%), Gaps = 37/256 (14%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
             IVTGA+ G+G   AY L++ G HVV+  RS   L + ++        A        + 
Sbjct: 16  KVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGA-ASAHYIAGTME 74

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFL 180
                 +F     + +   DM      L +                 + M  N++    L
Sbjct: 75  DMTFAEQFVAQAGKLMGGLDMLI----LNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVL 130

Query: 181 TKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKL 240
           T   LP+LK S     IV V+S   +                      YP    Y  SK 
Sbjct: 131 TVAALPMLKQS--NGSIVVVSSLAGK--------------------VAYPMVAAYSASKF 168

Query: 241 CLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQSP 300
            L  F   + +   + +   VS+     G++ T    +  S +  M              
Sbjct: 169 ALDGFFSSIRKEYSVSRVN-VSITLCVLGLIDTETAMKAVSGIVHMQ---------AAPK 218

Query: 301 EKGINSVLDAALAPPE 316
           E+    ++       E
Sbjct: 219 EECALEIIKGGALRQE 234

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 82.4 bits (203), Expect = 8e-19
 Identities = 47/262 (17%), Positives = 78/262 (29%), Gaps = 45/262 (17%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V +V+G   G+GA+   A+  EG  VV             A++             +D++
Sbjct: 8   VALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA-----DAARYVHLDVT 62

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGAF 178
                    D+             + +L+NNAGI  + T        + +++  N  G F
Sbjct: 63  QPAQWKAAVDTAVTA------FGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVF 116

Query: 179 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYS 238
              +                                   I                Y  +
Sbjct: 117 LGIR---------------------AVVKPMKEAGRGSIINISSIEGLAGTVACHGYTAT 155

Query: 239 KLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQ 298
           K  +   +      LG      + V +  PG+VKT +   VP  +   A      LG   
Sbjct: 156 KFAVRGLTKSTALELG---PSGIRVNSIHPGLVKTPMTDWVPEDIFQTA------LGRAA 206

Query: 299 SPEKGINSVLDAALAPPETSGV 320
            P +  N V+   LA  E+S  
Sbjct: 207 EPVEVSNLVV--YLASDESSYS 226

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score = 81.2 bits (200), Expect = 2e-18
 Identities = 44/261 (16%), Positives = 78/261 (29%), Gaps = 35/261 (13%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
             I+TGA +G+G   A   +  G  VV+   ++   +  + +I      A   A + D++
Sbjct: 13  CAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQA--FACRCDIT 70

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS-RLTPEGYDQMMSTNYIGAFF 179
           S Q +    D              + +L+NNAG        +    + +    N    F 
Sbjct: 71  SEQELSALADFAISK------LGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFH 124

Query: 180 LTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSK 239
                                 S               +T               Y  SK
Sbjct: 125 ---------------------LSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSK 163

Query: 240 LCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGLLQS 299
                    +  +LG    +++ V    PG + T+ ++ V +            +  L  
Sbjct: 164 AAASHLVRNMAFDLG---EKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQ 220

Query: 300 PEKGINSVLDAALAPPETSGV 320
           P+   N+ L   L  P  S V
Sbjct: 221 PQDIANAAL--FLCSPAASWV 239

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.3 bits (197), Expect = 8e-18
 Identities = 49/278 (17%), Positives = 86/278 (30%), Gaps = 54/278 (19%)

Query: 59  RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH------LLSETMADITSRNKDARL 112
           R V ++TG +SG+G   A  L+ +      V  +         L E    +        L
Sbjct: 2   RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARAL--ACPPGSL 59

Query: 113 EAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMST 172
           E  Q+D+   +SV   ++ + +  +D  + ++   L+           L  +    ++  
Sbjct: 60  ETLQLDVRDSKSVAAARERVTEGRVDVLVCNAGLGLLGP------LEALGEDAVASVLDV 113

Query: 173 NYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCA 232
           N +G   + +  LP +K       +V  +                            P  
Sbjct: 114 NVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMG---------------------LPFN 152

Query: 233 RIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS----------- 281
            +Y  SK  L      L   L       V +   + G V T  M +V             
Sbjct: 153 DVYCASKFALEGLCESLAVLLL---PFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDI 209

Query: 282 -----FLSLMAFTVLKLLGLLQSPEKGINSVLDAALAP 314
                F   +A +        Q+PE+     L A  AP
Sbjct: 210 HTFHRFYQYLAHSKQVFREAAQNPEEVAEVFLTALRAP 247

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score = 79.8 bits (196), Expect = 9e-18
 Identities = 49/221 (22%), Positives = 84/221 (38%), Gaps = 32/221 (14%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V +VTGATSG+G   A  L +EG  V +  R    L  T+ ++     +A  +    D+ 
Sbjct: 4   VALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEA--DGRTCDVR 61

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGAF 178
           S   +     ++ +       +  + +L+NNAG     +   L  E +  ++ TN  G F
Sbjct: 62  SVPEIEALVAAVVER------YGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVF 115

Query: 179 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYS 238
            +TK +L         +  +   + T                      +    A  Y  S
Sbjct: 116 RVTKQVLKAGGMLERGTGRIVNIASTGGK-------------------QGVVHAAPYSAS 156

Query: 239 KLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV 279
           K  ++ F+  L   L       ++V A  PG V+T +   V
Sbjct: 157 KHGVVGFTKALGLELA---RTGITVNAVCPGFVETPMAASV 194

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score = 79.4 bits (195), Expect = 1e-17
 Identities = 42/221 (19%), Positives = 88/221 (39%), Gaps = 34/221 (15%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH-LLSETMADITSRNKDARLEAFQVDL 119
           V ++TG+++GLG + A   + E   VV+  RS     +  + +I     +A   A + D+
Sbjct: 9   VVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEA--IAVKGDV 66

Query: 120 SSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGA 177
           +    V+    S  +          + ++INNAG+    +S  ++   +++++ TN  GA
Sbjct: 67  TVESDVINLVQSAIKE------FGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGA 120

Query: 178 FFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEY 237
           F  ++  +     + +   ++N++S   +                      +P    Y  
Sbjct: 121 FLGSREAIKYFVENDIKGTVINMSSVHEKI--------------------PWPLFVHYAA 160

Query: 238 SKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE 278
           SK  + + +  L         + + V    PG + T I  E
Sbjct: 161 SKGGMKLMTETLALEYA---PKGIRVNNIGPGAINTPINAE 198

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 79.0 bits (194), Expect = 2e-17
 Identities = 47/231 (20%), Positives = 83/231 (35%), Gaps = 36/231 (15%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVL-VGRSSHLLSETMADITSRNKDARLEAFQVDL 119
           V + TGA  G+G   A  L R G  VV+  G SS    E +A++          A Q D+
Sbjct: 8   VALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQG--VAIQADI 65

Query: 120 SSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI--LATSSRLTPEGYDQMMSTNYIGA 177
           S    V+   D              +  +++N+G+        +T E +D++ + N  G 
Sbjct: 66  SKPSEVVALFDKAVSH------FGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQ 119

Query: 178 FFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEY 237
           FF+ +  L   +         ++ +       +A                      +Y  
Sbjct: 120 FFVAQQGLKHCRRGGRIILTSSIAAVMTGIPNHA----------------------LYAG 157

Query: 238 SKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAF 288
           SK  +  F      + G   ++ V+V    PG VKT++  E     +   +
Sbjct: 158 SKAAVEGFCRAFAVDCG---AKGVTVNCIAPGGVKTDMFDENSWHYAPGGY 205

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score = 78.2 bits (192), Expect = 3e-17
 Identities = 28/93 (30%), Positives = 39/93 (41%), Gaps = 6/93 (6%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V ++TG  SGLG A A  L+ EG  + LV  SS  L  + A +     DA +     D+S
Sbjct: 6   VVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVS 65

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAG 153
               V  +  +  +          I    NNAG
Sbjct: 66  DEAQVEAYVTATTER------FGRIDGFFNNAG 92

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score = 77.2 bits (189), Expect = 9e-17
 Identities = 41/218 (18%), Positives = 75/218 (34%), Gaps = 16/218 (7%)

Query: 60  PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDL 119
           P  ++TG    +G + A  L ++GF VV+  R S   ++ +    +  +       + DL
Sbjct: 2   PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDL 61

Query: 120 SSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL----TPEGYDQMMSTNYI 175
           S   S+L   + +      +       +L+NNA     +  L    T    D       +
Sbjct: 62  SLSSSLLDCCEDIIDCSFRA--FGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQV 119

Query: 176 GAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIY 235
              F +  + PL        R     ++  RN+    + +        +     P   +Y
Sbjct: 120 AELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCD-------AMTDLPLPGFCVY 172

Query: 236 EYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKT 273
             +K  L   +      L     RH+ V A  PG+   
Sbjct: 173 TMAKHALGGLTRAAALELA---PRHIRVNAVAPGLSLL 207

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score = 76.8 bits (188), Expect = 9e-17
 Identities = 45/218 (20%), Positives = 83/218 (38%), Gaps = 29/218 (13%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           VC+VTGA   +G A A  L+ EG  + L+  +   L +  A +  +  +AR  ++  D++
Sbjct: 7   VCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEAR--SYVCDVT 64

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFL 180
           S ++V+   DS+ +     D   +        G  A       + + ++++ N  GAF  
Sbjct: 65  SEEAVIGTVDSVVRDFGKIDFLFNNA---GYQGAFAPVQDYPSDDFARVLTINVTGAFH- 120

Query: 181 TKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKL 240
                           +  V+       +   VN  ++ G      K  P    Y  SK 
Sbjct: 121 ---------------VLKAVSRQMITQNYGRIVNTASMAGV-----KGPPNMAAYGTSKG 160

Query: 241 CLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE 278
            ++  +     +L      ++ V A  PG +    M E
Sbjct: 161 AIIALTETAALDLA---PYNIRVNAISPGYMGPGFMWE 195

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score = 76.3 bits (187), Expect = 2e-16
 Identities = 44/220 (20%), Positives = 76/220 (34%), Gaps = 33/220 (15%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
             +VTG + G+G A    L+  G  V    R+   L E +     R K   +E    DL 
Sbjct: 8   TALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIW--REKGLNVEGSVCDLL 65

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGAF 178
           S     K   ++            + +L+NNAG++        T + Y+ +M TN+  A+
Sbjct: 66  SRTERDKLMQTVAHVF-----DGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAY 120

Query: 179 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYS 238
            L++                        +     +   +I G   L S     A     S
Sbjct: 121 HLSQ----------------IAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSA-----S 159

Query: 239 KLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE 278
           K  +   +  L          ++ V +  PGV+ T ++  
Sbjct: 160 KGAINQMTKSLACEWA---KDNIRVNSVAPGVILTPLVET 196

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 75.1 bits (184), Expect = 3e-16
 Identities = 36/222 (16%), Positives = 75/222 (33%), Gaps = 40/222 (18%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
             ++TGA  G+G A     ++EG  +V        L E    + +           +D++
Sbjct: 7   AVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGA-------HPVVMDVA 59

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGAF 178
              SV +                 +  +++ AGI   +   ++  E ++ ++  N  G+F
Sbjct: 60  DPASVERGFAEALAH------LGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSF 113

Query: 179 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYS 238
            + K     ++     S ++  +     N+  A                       Y  S
Sbjct: 114 LVAKAASEAMREKNPGSIVLTASRVYLGNLGQA----------------------NYAAS 151

Query: 239 KLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP 280
              ++  +  L   LG      + V    PG ++T +  +VP
Sbjct: 152 MAGVVGLTRTLALELG---RWGIRVNTLAPGFIETRMTAKVP 190

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 75.2 bits (184), Expect = 4e-16
 Identities = 43/222 (19%), Positives = 78/222 (35%), Gaps = 33/222 (14%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V +VTGA  G+G A A  L ++GF V +   +        ++I      A   A +VD+S
Sbjct: 3   VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHA--VAVKVDVS 60

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMM--STNYIGAF 178
               V    +  ++            +++NNAG+  ++   +          + N  G  
Sbjct: 61  DRDQVFAAVEQARKT------LGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVI 114

Query: 179 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYS 238
           +  +  +   K      +I+N  S                           P   +Y  S
Sbjct: 115 WGIQAAVEAFKKEGHGGKIINACSQAGHV--------------------GNPELAVYSSS 154

Query: 239 KLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP 280
           K  +   +    R+L       ++V    PG+VKT +  E+ 
Sbjct: 155 KFAVRGLTQTAARDLA---PLGITVNGYCPGIVKTPMWAEID 193

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.4 bits (182), Expect = 6e-16
 Identities = 40/221 (18%), Positives = 74/221 (33%), Gaps = 42/221 (19%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V I+T A  G+G AAA A +REG  V+    +   L E                      
Sbjct: 8   VIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYP----------------- 50

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAF 178
             Q+ +      +Q    ++    + +L N AG +   T      + +D  M+ N    +
Sbjct: 51  GIQTRVLDVTKKKQIDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMY 110

Query: 179 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYS 238
            + K  LP +        I+N++S                     ++     C   Y  +
Sbjct: 111 LMIKAFLPKMLAQK-SGNIINMSSVASS-----------------VKGVVNRCV--YSTT 150

Query: 239 KLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV 279
           K  ++  +  +  +      + +      PG V T  ++E 
Sbjct: 151 KAAVIGLTKSVAADFI---QQGIRCNCVCPGTVDTPSLQER 188

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 73.2 bits (178), Expect = 2e-15
 Identities = 32/219 (14%), Positives = 70/219 (31%), Gaps = 17/219 (7%)

Query: 63  IVTGATSGLGAAAAYAL---SREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDL 119
           ++TG   GLG     AL    +   H+    R+     + + D+   + +  +    +  
Sbjct: 6   LITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQA-KELEDLAKNHSNIHILEIDL-- 62

Query: 120 SSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFF 179
                      +  + +      + +      A   A  + +  +     + TN +    
Sbjct: 63  -RNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIM 121

Query: 180 LTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSK 239
           L K  LPLLK +   +    +       +  + +          ++         Y  SK
Sbjct: 122 LAKACLPLLKKAAKANESQPMGVGRAAIINMSSILG-------SIQGNTDGGMYAYRTSK 174

Query: 240 LCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE 278
             L   +  L  +L     + +  ++  PG VKT++   
Sbjct: 175 SALNAATKSLSVDLY---PQRIMCVSLHPGWVKTDMGGS 210

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 72.8 bits (178), Expect = 2e-15
 Identities = 32/144 (22%), Positives = 58/144 (40%), Gaps = 8/144 (5%)

Query: 60  PVCIVTGATSGLGAAAAYALSREGFHVVL-VGRSSHLLSETMADITSRNKDARLEAFQVD 118
           PV +VTGA+ G+G A A +L + G  V++   RS+    E    I +    A    F  D
Sbjct: 2   PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQA--ITFGGD 59

Query: 119 LSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAF 178
           +S    V     +        D+  +   +  +  ++          +D+++  N  G F
Sbjct: 60  VSKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRM----KKSQWDEVIDLNLTGVF 115

Query: 179 FLTKLLLPLLKNSPVPSRIVNVTS 202
             T+    ++       RI+N+ S
Sbjct: 116 LCTQAATKIMMKKR-KGRIINIAS 138

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 72.0 bits (176), Expect = 4e-15
 Identities = 42/220 (19%), Positives = 89/220 (40%), Gaps = 30/220 (13%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V +VTGA  G+G   A  L++   HV+ + R+       + +I S   ++    +  D+S
Sbjct: 12  VALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYES--SGYAGDVS 69

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFL 180
             + +      +   +L    +  I +            R+  + ++ ++ TN    F++
Sbjct: 70  KKEEI----SEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYI 125

Query: 181 TKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKL 240
           T+ +   + N+    RI+N++S         Q N                    Y  SK 
Sbjct: 126 TQPISKRMINNR-YGRIINISSIVGLTGNVGQAN--------------------YSSSKA 164

Query: 241 CLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP 280
            ++ F+  L + L    SR+++V A  PG + +++  ++ 
Sbjct: 165 GVIGFTKSLAKELA---SRNITVNAIAPGFISSDMTDKIS 201

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score = 71.4 bits (174), Expect = 7e-15
 Identities = 40/220 (18%), Positives = 70/220 (31%), Gaps = 32/220 (14%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
             ++TG+  G+G A A A  REG  V +   +      T A+I          A  +D++
Sbjct: 7   TALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI-----GPAACAIALDVT 61

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFL 180
              S+ +    L       D    I +       LA    +T E YD++ + N  G  F+
Sbjct: 62  DQASIDRCVAELLDRWGSID----ILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFM 117

Query: 181 TKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKL 240
            +        +             +      +     +               +Y  +K 
Sbjct: 118 MQ------AVARAMIAGGRGGKIINMASQAGRRGEALVG--------------VYCATKA 157

Query: 241 CLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP 280
            ++  +     NL       ++V A  PGVV       V 
Sbjct: 158 AVISLTQSAGLNLI---RHGINVNAIAPGVVDGEHWDGVD 194

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score = 69.7 bits (170), Expect = 2e-14
 Identities = 47/222 (21%), Positives = 88/222 (39%), Gaps = 40/222 (18%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
             +VTGA SG+G AA    +REG  +V V R   LL+E +A +     +A   A   D+S
Sbjct: 7   TILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL-----EAEAIAVVADVS 61

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAF 178
             ++V    +++    L+      +  + + AG+   A S  L  E +++++  N  G+F
Sbjct: 62  DPKAV----EAVFAEALEE--FGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSF 115

Query: 179 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYS 238
            + +    +L+         +V       + +                        Y   
Sbjct: 116 LVARKAGEVLEEGGSLVLTGSVAGLGAFGLAH------------------------YAAG 151

Query: 239 KLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP 280
           KL ++  +  L   L     + V V    PG+++T +   +P
Sbjct: 152 KLGVVGLARTLALELA---RKGVRVNVLLPGLIQTPMTAGLP 190

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score = 69.5 bits (169), Expect = 4e-14
 Identities = 39/221 (17%), Positives = 74/221 (33%), Gaps = 28/221 (12%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V +VTG+TSG+G   A AL+ +G  +VL G       E +    +     ++     DLS
Sbjct: 6   VAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLS 65

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFL 180
             ++V    D+  + +   D+  +   + + A I         E +D +++ N       
Sbjct: 66  KGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDF----PTEKWDAILALNL------ 115

Query: 181 TKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKL 240
                            V   +         Q     I                Y  +K 
Sbjct: 116 ---------------SAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKH 160

Query: 241 CLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS 281
            ++ F+            + ++  A  PG V+T ++ +  S
Sbjct: 161 GVVGFTKVTALETA---GQGITANAICPGWVRTPLVEKQIS 198

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 68.7 bits (167), Expect = 5e-14
 Identities = 23/221 (10%), Positives = 49/221 (22%), Gaps = 43/221 (19%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
             +V G    LG+    A     + V  +            D+    + +     ++  S
Sbjct: 4   RVLVYGGRGALGSRCVQAFRARNWWVASI------------DVVENEEASASVIVKMTDS 51

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL---TPEGYDQMMSTNYIGA 177
             +      D +   +        +  ++  AG  A  +       +  D M   +   +
Sbjct: 52  FTEQA----DQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTS 107

Query: 178 FFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEY 237
              + L                     H                                
Sbjct: 108 TISSHLA------------------TKHLKEGGLLTLAGAKAALDGTPGMIGYGM----- 144

Query: 238 SKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE 278
           +K  +      L            + IA  P  + T + R+
Sbjct: 145 AKGAVHQLCQSLAGKNSGMP-SGAAAIAVLPVTLDTPMNRK 184

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score = 69.4 bits (169), Expect = 6e-14
 Identities = 41/220 (18%), Positives = 74/220 (33%), Gaps = 32/220 (14%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V  +TG  +GLG      LS  G   V+  R   +L  T   I+S+  + ++ A Q D+ 
Sbjct: 27  VAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGN-KVHAIQCDVR 85

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNA--GILATSSRLTPEGYDQMMSTNYIGAF 178
               V      L +            ++INNA    ++ + RL+P  +  +      G  
Sbjct: 86  DPDMVQNTVSELIKV------AGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTA 139

Query: 179 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYS 238
           F+T  +   L  +   +  +++T+          V + +                    +
Sbjct: 140 FVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSAS--------------------A 179

Query: 239 KLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE 278
           K  +   S  L    G      +      PG +KT     
Sbjct: 180 KAGVEAMSKSLAAEWG---KYGMRFNVIQPGPIKTKGAFS 216

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score = 67.9 bits (165), Expect = 9e-14
 Identities = 46/246 (18%), Positives = 83/246 (33%), Gaps = 43/246 (17%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
             +VTG  SGLG AAA AL   G+ VV++                R +   L   + D++
Sbjct: 3   SALVTGGASGLGRAAALALKARGYRVVVLDL--------------RREGEDLIYVEGDVT 48

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFL 180
             + V +     Q+      + S+  + +    IL        E + +++  N +G F +
Sbjct: 49  REEDVRRAVARAQEEAPLFAVVSAAGVGLAEK-ILGKEGPHGLESFRRVLEVNLLGTFNV 107

Query: 181 TKLLLPLLKNSPV-----PSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIY 235
            +L    ++ +P         IVN  S                        +       Y
Sbjct: 108 LRLAAWAMRENPPDAEGQRGVIVNTASVAAF--------------------EGQIGQAAY 147

Query: 236 EYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLG 295
             SK  ++  +    R L       + V+   PG+  T +++ +P          +    
Sbjct: 148 AASKGGVVALTLPAARELA---GWGIRVVTVAPGLFDTPLLQGLPEKAKASLAAQVPFPP 204

Query: 296 LLQSPE 301
            L  PE
Sbjct: 205 RLGRPE 210

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 68.2 bits (166), Expect = 1e-13
 Identities = 44/221 (19%), Positives = 87/221 (39%), Gaps = 32/221 (14%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH-LLSETMADITSRNKDARLEAFQVDL 119
           V +VTGA  G+G   A  L R G  V++   +S     E +A I     DA     + ++
Sbjct: 20  VALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDA--ACVKANV 77

Query: 120 SSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFF 179
              + +++  +   +     D+  S   +++   +      +TPE +D++ + N  G FF
Sbjct: 78  GVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVK----DVTPEEFDRVFTINTRGQFF 133

Query: 180 LTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSK 239
           + +                      H  +    +   +ITG+     K  P   +Y  SK
Sbjct: 134 VAREAYK------------------HLEIGGRLILMGSITGQA----KAVPKHAVYSGSK 171

Query: 240 LCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP 280
             +  F+  +  ++     + ++V    PG +KT++   V 
Sbjct: 172 GAIETFARCMAIDMA---DKKITVNVVAPGGIKTDMYHAVC 209

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 67.4 bits (164), Expect = 1e-13
 Identities = 40/268 (14%), Positives = 83/268 (30%), Gaps = 53/268 (19%)

Query: 56  GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAF 115
           GI+    +V  A+ G+G A A  LS+EG  V +  R+  LL  +                
Sbjct: 1   GIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGH-----------RYV 49

Query: 116 QVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNA--GILATSSRLTPEGYDQMMSTN 173
             DL     +L             +    + +L+ NA          LT E + + + + 
Sbjct: 50  VCDLRKDLDLLF------------EKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSL 97

Query: 174 YIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCAR 233
           ++    + +                      +      +     +    F          
Sbjct: 98  FLNMIKIVR---------------------NYLPAMKEKGWGRIVAITSFSVISPIENLY 136

Query: 234 IYEYSKLCLLIFSYELHRNLGLDKSRH-VSVIAADPGVVKTNIMREVPSFLSLMAFTVLK 292
               +++ L  F     + L  + + + ++V    PG  +T  ++E+ S           
Sbjct: 137 TSNSARMALTGFL----KTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKKKQVESQI 192

Query: 293 LLGLLQSPEKGINSVLDAALAPPETSGV 320
            +  +  PE+  + V    L   + S +
Sbjct: 193 PMRRMAKPEEIASVVA--FLCSEKASYL 218

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.6 bits (151), Expect = 6e-12
 Identities = 36/226 (15%), Positives = 72/226 (31%), Gaps = 33/226 (14%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           V ++TG  SGLG A A  L  +G   VL+   +         + +    A      V   
Sbjct: 7   VAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAP---ADVTSE 63

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFL 180
                       +   +D  ++ +   + +    L      T E + +++  N +G F +
Sbjct: 64  KDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNV 123

Query: 181 TKLLLPLLKNSPVP-----SRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIY 235
            +L+   +  +          I+N  S         Q                      Y
Sbjct: 124 IRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQA--------------------AY 163

Query: 236 EYSKLCLLIFSYELHRNLGLDKSRH-VSVIAADPGVVKTNIMREVP 280
             SK  ++  +      +  D +   + V+   PG+  T ++  +P
Sbjct: 164 SASKGGIVGMT----LPIARDLAPIGIRVMTIAPGLFGTPLLTSLP 205

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 60.9 bits (147), Expect = 2e-11
 Identities = 50/271 (18%), Positives = 103/271 (38%), Gaps = 51/271 (18%)

Query: 52  PPITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDAR 111
           PP    +    +VTG   G+G A A  L+ +G  V +  R S                  
Sbjct: 3   PPFVS-R--SVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGS-------------GAPKG 46

Query: 112 LEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMS 171
           L   +VD++   +V +   ++++     ++  S   L  +A ++    R+T E ++++++
Sbjct: 47  LFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLM----RMTEEKFEKVIN 102

Query: 172 TNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPC 231
            N  GAF + +                  +    RN F   +   +++G + + ++    
Sbjct: 103 ANLTGAFRVAQ----------------RASRSMQRNKFGRMIFIGSVSGLWGIGNQANYA 146

Query: 232 ARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFL--SLMAFT 289
           A     SK  ++  +  + R L         V    PG + T++ R +   +    + F 
Sbjct: 147 A-----SKAGVIGMARSIARELSKANVTANVV---APGYIDTDMTRALDERIQQGALQFI 198

Query: 290 VLKLLGLLQSPEKGINSVLDAALAPPETSGV 320
             K +G   +P +    V    LA  + S +
Sbjct: 199 PAKRVG---TPAEVAGVVS--FLASEDASYI 224

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 60.3 bits (145), Expect = 3e-11
 Identities = 28/220 (12%), Positives = 60/220 (27%), Gaps = 43/220 (19%)

Query: 63  IVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF 122
           IV G    LG+A      + G+ V+ +  S++  ++  ++I         E  Q  L   
Sbjct: 6   IVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQAD--SNILVDGNKNWTEQEQSILEQT 63

Query: 123 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRL---TPEGYDQMMSTNYIGAFF 179
            S L+                 +  +   AG  A  S       +  D M+  +   +  
Sbjct: 64  ASSLQGSQ--------------VDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAI 109

Query: 180 LTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSK 239
             K       +      +    +        + +                        +K
Sbjct: 110 AAK---LATTHLKPGGLLQLTGAAAAMGPTPSMIGYGM--------------------AK 146

Query: 240 LCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV 279
             +   +  L          + +V+   P  + T + R+ 
Sbjct: 147 AAVHHLTSSLAAKDSGLP-DNSAVLTIMPVTLDTPMNRKW 185

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 60.2 bits (145), Expect = 4e-11
 Identities = 22/157 (14%), Positives = 43/157 (27%), Gaps = 20/157 (12%)

Query: 61  VCIVTGATS--GLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVD 118
             +V G T+   LG A A  L   G  V L  ++  L  E      +        A    
Sbjct: 10  KALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQ 69

Query: 119 LSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNA------GILATSSRLTPEGYDQMMST 172
                ++              +    +  L++         +         + +   +  
Sbjct: 70  DEELDALFAG---------VKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEV 120

Query: 173 NYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVF 209
           +      + +   PLL+       IV +T +    V 
Sbjct: 121 SAYSLVAVARRAEPLLREG---GGIVTLTYYASEKVV 154

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score = 59.8 bits (144), Expect = 5e-11
 Identities = 41/223 (18%), Positives = 81/223 (36%), Gaps = 39/223 (17%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           + +VTGA+ G+G A A  L+  G  V+    S +        +      A  +   ++++
Sbjct: 6   IALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYL-----GANGKGLMLNVT 60

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMM--STNYIGAF 178
              S+                   + +L+NNAGI   +  +  +  +      TN    F
Sbjct: 61  DPASI------ESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVF 114

Query: 179 FLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYS 238
            L+K ++  +       RI+ + S         Q N                    Y  +
Sbjct: 115 RLSKAVMRAMMKKR-HGRIITIGSVVGTMGNGGQAN--------------------YAAA 153

Query: 239 KLCLLIFSYELHRNLGLDKSRH-VSVIAADPGVVKTNIMREVP 280
           K  L+ FS    ++L  + +   ++V    PG ++T++ R + 
Sbjct: 154 KAGLIGFS----KSLAREVASRGITVNVVAPGFIETDMTRALS 192

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 59.2 bits (142), Expect = 1e-10
 Identities = 23/126 (18%), Positives = 45/126 (35%), Gaps = 29/126 (23%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
           + +++G  +G+GAA    L   G  +V +       +E +AD+++     +  A  +   
Sbjct: 3   IIVISGCATGIGAATRKVLEAAGHQIVGIDIRD---AEVIADLSTAEGRKQAIADVLA-- 57

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFL 180
                                   +  L+  AG+   +     +    ++S NY GA  L
Sbjct: 58  -------------------KCSKGMDGLVLCAGLGPQT-----KVLGNVVSVNYFGATEL 93

Query: 181 TKLLLP 186
               LP
Sbjct: 94  MDAFLP 99

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

 Score = 57.7 bits (138), Expect = 4e-10
 Identities = 16/58 (27%), Positives = 24/58 (41%)

Query: 59  RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQ 116
            PV +VTGA   LG + A  L  EG+ V L    S   +  ++   +  +       Q
Sbjct: 2   VPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQ 59

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 54.2 bits (129), Expect = 5e-09
 Identities = 48/267 (17%), Positives = 79/267 (29%), Gaps = 49/267 (18%)

Query: 59  RP--VCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAF 115
           +P    +VTG T G+G   A  L+R G  H++LV RS          +      A LEA 
Sbjct: 7   KPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELV------AELEAL 60

Query: 116 QVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLIN--NAGILATSSRLTPEGYDQMMSTN 173
               +     +  ++S+++ L        +  + +        T   LT E  ++     
Sbjct: 61  GARTTVAACDVTDRESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAK 120

Query: 174 YIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCAR 233
            +GA  L +L   L                     F    +  +  G         P   
Sbjct: 121 VLGARNLHELTREL-----------------DLTAFVLFSSFASAFG--------APGLG 155

Query: 234 IYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL 293
            Y      L   + +            +   A   G    + M E P         V+++
Sbjct: 156 GYAPGNAYLDGLAQQRRS-------DGLPATAVAWGTWAGSGMAEGPVADRFRRHGVIEM 208

Query: 294 LGLLQSPEKGINSVLDAALAPPETSGV 320
                 PE      L  AL   E   +
Sbjct: 209 -----PPETAC-RALQNALDRAEVCPI 229

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score = 53.8 bits (128), Expect = 6e-09
 Identities = 36/270 (13%), Positives = 78/270 (28%), Gaps = 47/270 (17%)

Query: 61  VCIVTGATS--GLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVD 118
             +VTG  S   +    A A+ REG  +    ++  L    + +  ++         Q D
Sbjct: 7   RILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLK-GRVEEFAAQLGSDI--VLQCD 63

Query: 119 LSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATS-------SRLTPEGYDQMMS 171
           ++   S+      L +     D        +++ G            + +T EG+     
Sbjct: 64  VAEDASIDTMFAELGKVWPKFDG------FVHSIGFAPGDQLDGDYVNAVTREGFKIAHD 117

Query: 172 TNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPC 231
            +      + K    +L        ++ ++                            P 
Sbjct: 118 ISSYSFVAMAKACRSMLNPGSA---LLTLSYLGAERAI--------------------PN 154

Query: 232 ARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVL 291
             +   +K  L      +   +G +  R     A   G ++T     +  F  ++A    
Sbjct: 155 YNVMGLAKASLEANVRYMANAMGPEGVRVN---AISAGPIRTLAASGIKDFRKMLAHCEA 211

Query: 292 KL-LGLLQSPEKGINSVLDAALAPPETSGV 320
              +    + E   NS     L    ++G+
Sbjct: 212 VTPIRRTVTIEDVGNSAA--FLCSDLSAGI 239

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 51.4 bits (121), Expect = 5e-08
 Identities = 22/239 (9%), Positives = 63/239 (26%), Gaps = 18/239 (7%)

Query: 61  VCIVTGATS--GLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLE----- 113
           +C + G     G G   A  LS+    ++                  +  +  +      
Sbjct: 4   ICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKK 63

Query: 114 -----AFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQ 168
                    D S   +    +++      +   + +I+ + N   I     ++    +  
Sbjct: 64  MNILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANL--IHQKYGKINMLVHSL 121

Query: 169 MMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKC 228
             +         T        ++   S    ++   +        ++         +   
Sbjct: 122 ANAKEVQKDLLNTS--RKGYLDALSKSSYSLISLCKYFVNIMKPQSSIISLTYHASQKVV 179

Query: 229 YPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMA 287
                    +K  L   +  L  +LG + +  ++ I+   G +K+     +    +   
Sbjct: 180 PGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTIS--AGPLKSRAATAINKLNNTYE 236

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 48.5 bits (114), Expect = 3e-07
 Identities = 12/50 (24%), Positives = 18/50 (36%), Gaps = 1/50 (2%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDA 110
           V ++ G    LG   A  L+  G  +V+  R         A+      DA
Sbjct: 3   VALLGGT-GNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDA 51

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

 Score = 48.0 bits (113), Expect = 3e-07
 Identities = 18/142 (12%), Positives = 37/142 (26%), Gaps = 18/142 (12%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS 120
             +V   T  +G  +A  L+ EG  VVL GR           +   NK  ++     + +
Sbjct: 25  KAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSV---NKRFKVNVTAAETA 81

Query: 121 SFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFL 180
              S         + +  +        +            L    +    S   +  +  
Sbjct: 82  DDASR-------AEAVKGAHF------VFTAGA--IGLELLPQAAWQNESSIEIVADYNA 126

Query: 181 TKLLLPLLKNSPVPSRIVNVTS 202
              L     ++    +      
Sbjct: 127 QPPLGIGGIDATDKGKEYGGKR 148

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

 Score = 47.1 bits (110), Expect = 1e-06
 Identities = 10/44 (22%), Positives = 17/44 (38%), Gaps = 2/44 (4%)

Query: 61  VCIVTGA--TSGLGAAAAYALSREGFHVVLVGRSSHLLSETMAD 102
             +V+G    S +    A     +G  +VL G     L + + D
Sbjct: 8   RILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITD 51

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

 Score = 46.6 bits (109), Expect = 2e-06
 Identities = 5/52 (9%), Positives = 15/52 (28%), Gaps = 3/52 (5%)

Query: 61  VCIVTGATS--GLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDA 110
             ++ G  +   +    A +   +G  +     +  L  + +  I       
Sbjct: 7   KGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLE-KRVRPIAQELNSP 57

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 46.3 bits (108), Expect = 3e-06
 Identities = 9/56 (16%), Positives = 20/56 (35%), Gaps = 2/56 (3%)

Query: 61  VCIVTGA--TSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEA 114
              + G    +G G A A +L+  G  +++      L     +    +   +R+  
Sbjct: 10  RAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLP 65

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 39.4 bits (90), Expect = 4e-04
 Identities = 9/72 (12%), Positives = 21/72 (29%)

Query: 64  VTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQ 123
           + G T  +G     A    G    ++ R   + +     +    K    +  +  L   Q
Sbjct: 8   IVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQ 67

Query: 124 SVLKFKDSLQQW 135
            ++     +   
Sbjct: 68  RLVDALKQVDVV 79

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 38.1 bits (87), Expect = 0.001
 Identities = 13/70 (18%), Positives = 21/70 (30%), Gaps = 5/70 (7%)

Query: 58  KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQV 117
           ++    V GAT   GA+     +  G HV     S                   +  FQ 
Sbjct: 2   QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLK-----GLIAEELQAIPNVTLFQG 56

Query: 118 DLSSFQSVLK 127
            L +   ++ 
Sbjct: 57  PLLNNVPLMD 66

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} Length = 265

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

 Score = 36.3 bits (82), Expect = 0.004
 Identities = 15/44 (34%), Positives = 19/44 (43%), Gaps = 2/44 (4%)

Query: 61  VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADIT 104
           + +V G+ SGL   AA  L   G  V +  RS   LS     I 
Sbjct: 7   IAVVGGSISGL--TAALMLRDAGVDVDVYERSPQPLSGFGTGIV 48

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	365
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	100.0
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	100.0
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	100.0
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	100.0
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	100.0
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	100.0
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	100.0
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	100.0
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	100.0
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	100.0
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	100.0
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	100.0
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	100.0
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	100.0
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	100.0
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	100.0
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	100.0
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	100.0
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	100.0
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	100.0
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	100.0
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	100.0
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	100.0
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	100.0
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	100.0
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	100.0
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	100.0
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	100.0
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	100.0
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	100.0
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	100.0
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	100.0
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	100.0
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	100.0
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	100.0
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	100.0
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	100.0
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	100.0
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	100.0
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	100.0
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	100.0
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	100.0
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	100.0
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	100.0
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	100.0
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	100.0
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	100.0
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	100.0
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	100.0
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	100.0
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	100.0
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	100.0
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	100.0
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	100.0
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	100.0
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	100.0
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	100.0
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	100.0
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	100.0
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	100.0
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	100.0
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	100.0
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	100.0
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.97
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.85
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.83
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.82
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.77
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.75
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.74
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.74
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.74
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.74
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.73
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.7
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.68
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.67
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.66
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.65
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.64
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.64
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.62
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.61
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.6
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.6
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.58
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.56
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.55
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.33
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.31
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.3
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.19
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.14
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.05
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	98.92
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.9
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	98.33
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	98.29
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	98.19
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	98.17
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	98.16
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	98.11
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	98.03
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	97.98
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	97.96
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.95
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.86
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	97.84
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	97.82
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.81
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	97.79
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.78
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.74
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.72
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.7
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.68
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	97.68
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.6
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	97.59
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.57
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.52
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.47
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	97.44
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	97.39
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	97.37
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	97.36
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.35
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	97.32
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	97.32
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	97.32
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	97.31
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	97.29
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	97.29
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	97.26
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	97.22
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	97.18
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	97.16
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	97.12
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	97.11
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	97.11
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	97.1
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	97.1
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	97.09
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	97.09
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.06
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	97.01
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	97.01
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	96.99
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	96.94
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	96.92
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	96.85
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	96.84
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	96.82
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	96.8
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	96.8
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	96.73
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	96.66
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	96.58
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	96.48
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	96.26
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.23
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	96.15
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	96.02
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	95.93
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	95.92
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	95.89
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	95.88
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	95.8
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	95.78
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	95.71
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	95.66
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	95.58
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	95.54
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	95.53
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	95.48
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	95.44
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	95.43
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	95.41
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	95.37
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	95.33
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	95.3
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	95.29
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	95.25
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	95.03
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	94.83
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	94.6
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	94.59
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.57
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	94.54
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.48
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	94.31
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	94.28
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	94.19
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	94.15
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	94.08
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	94.07
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	93.83
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	93.83
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	93.82
d1nv8a_	271	N5-glutamine methyltransferase, HemK {Thermotoga m	93.82
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	93.81
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	93.78
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	93.72
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	93.71
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	93.68
d1ri5a_	252	mRNA cap (Guanine N-7) methyltransferase {Fungus (	93.58
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	93.53
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	93.49
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	93.45
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	93.35
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	93.3
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	93.29
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	93.19
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	93.1
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	93.08
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	92.97
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	92.97
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	92.89
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	92.84
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	92.78
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	92.76
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	92.59
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	92.59
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	92.48
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	92.28
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	92.24
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	92.14
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	92.09
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	92.06
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	92.03
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	91.95
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	91.93
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	91.93
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	91.92
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	91.88
d1u0sy_	118	CheY protein {Thermotoga maritima [TaxId: 2336]}	91.87
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	91.86
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	91.85
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	91.85
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	91.81
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	91.75
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	91.47
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	91.47
d2fhpa1	182	Putative methylase EF2452 {Enterococcus faecalis [	91.27
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	90.92
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	90.81
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	90.62
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	90.54
d1nkva_	245	Hypothetical Protein YjhP {Escherichia coli [TaxId	90.49
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	90.45
d1wg8a2	182	TM0872, methyltransferase domain {Thermus thermoph	90.43
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	90.42
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	90.11
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	90.09
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	90.04
d2frna1	260	Hypothetical protein PH0793 {Pyrococcus horikoshii	89.92
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	89.75
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	89.75
d2csua3	163	Acetate-CoA ligase alpha chain, AcdA, domains 2 an	89.6
d2b3ta1	274	N5-glutamine methyltransferase, HemK {Escherichia	89.22
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	88.97
d1im8a_	225	Hypothetical protein HI0319 (YecO) {Haemophilus in	88.87
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	88.68
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	88.63
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	88.59
d1xvaa_	292	Glycine N-methyltransferase {Rat (Rattus norvegicu	88.52
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	88.28
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	87.79
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	87.77
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	87.35
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	87.32
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	87.2
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	86.93
d2fr1a2	209	Erythromycin synthase, eryAI, 1st ketoreductase mo	86.83
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	86.68
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	86.36
d2p7ia1	225	Hypothetical protein ECA1738 {Erwinia carotovora [	86.21
d2ex4a1	222	Adrenal gland protein AD-003 (C9orf32) {Human (Hom	85.97
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	85.95
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	85.87
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	85.84
d2eyqa5	211	Transcription-repair coupling factor, TRCF {Escher	85.36
d2avna1	246	Hypothetical methyltransferase TM1389 {Thermotoga	85.13
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	85.05
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	84.7
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	84.39
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	84.25
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	83.86
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	83.28
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	83.21
d1tw3a2	253	Carminomycin 4-O-methyltransferase {Streptomyces p	82.93
d2gh1a1	281	Methyltransferase BC2162 {Bacillus cereus [TaxId:	82.7
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	82.67
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	82.65
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	82.42
d2fk8a1	280	Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri	82.22
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	82.12
d1peya_	119	Sporulation response regulator Spo0F {Bacillus sub	81.89
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	81.8
d2h00a1	250	Methyltransferase 10 domain containing protein MET	81.77
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	81.75
d1kpga_	285	CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}	81.74
d1hyqa_	232	Cell division regulator MinD {Archaeon Archaeoglob	81.7
d2fpoa1	183	Methylase YhhF {Escherichia coli [TaxId: 562]}	80.99
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	80.46
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	80.25

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=8.4e-51  Score=362.57  Aligned_cols=241  Identities=20%  Similarity=0.253  Sum_probs=215.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      +++||++|||||++|||+++|++|+++|++|++++|++++++++.+++++.  +.++.++++|++|+++++++++++.+ 
T Consensus         8 ~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~--g~~~~~~~~Dvs~~~~~~~~~~~~~~-   84 (255)
T d1fmca_           8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL--GGQAFACRCDITSEQELSALADFAIS-   84 (255)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHc--CCcEEEEEccCCCHHHHHHHHHHHHH-
Confidence            478999999999999999999999999999999999999999999999876  45789999999999999999999998 


Q ss_pred             HhccCCCCCeeEEEecCCcccC-CCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017812          136 LLDSDMHSSIQLLINNAGILAT-SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  214 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~~-~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~  214 (365)
                           .+++||+||||||+..+ ..+.+.++|++++++|+.|++++++.++|+|++++ .|+||++||.++.        
T Consensus        85 -----~~g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~g~Ii~isS~~~~--------  150 (255)
T d1fmca_          85 -----KLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAE--------  150 (255)
T ss_dssp             -----HHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT--------
T ss_pred             -----HcCCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhcccc-ccccccccccchh--------
Confidence                 55889999999998743 34789999999999999999999999999999887 7899999999998        


Q ss_pred             CccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHh
Q 017812          215 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLL  294 (365)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  294 (365)
                                  .+.++..+|++||+|+++|+++|++|++   ++||+||+|+||+|+|++.+...............|+
T Consensus       151 ------------~~~~~~~~Y~asKaal~~lt~~lA~el~---~~gIrVN~I~PG~i~T~~~~~~~~~e~~~~~~~~~pl  215 (255)
T d1fmca_         151 ------------NKNINMTSYASSKAAASHLVRNMAFDLG---EKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPI  215 (255)
T ss_dssp             ------------CCCTTCHHHHHHHHHHHHHHHHHHHHHH---TTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSS
T ss_pred             ------------ccccccccchhHHHHHHHHHHHHHHHhC---ccCeEEEEeeeCcCcChHhhccCCHHHHHHHHhcCCC
Confidence                        8889999999999999999999999998   8999999999999999998765433333334455688


Q ss_pred             cCCCCHHHHHHHHHHHhcCCC---CCcccEEeCCCCccc
Q 017812          295 GLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRTV  330 (365)
Q Consensus       295 ~~~~~p~e~A~~i~~~~l~~~---~~~G~~~~~~~g~~~  330 (365)
                      +|+.+|+|+|++++  ||+++   ..+|+.+.+|+|...
T Consensus       216 ~R~g~pedvA~~v~--fL~S~~s~~itG~~i~vDGG~~~  252 (255)
T d1fmca_         216 RRLGQPQDIANAAL--FLCSPAASWVSGQILTVSGGGVQ  252 (255)
T ss_dssp             CSCBCHHHHHHHHH--HHHSGGGTTCCSCEEEESTTSCC
T ss_pred             CCCcCHHHHHHHHH--HHhCchhcCCcCCEEEECcCccc
Confidence            99999999999999  55554   469999999999754

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=100.00  E-value=9.2e-51  Score=362.93  Aligned_cols=242  Identities=21%  Similarity=0.224  Sum_probs=215.4

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      ++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+..++.++.+++||++|+++++++++++.+  
T Consensus         2 l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~--   79 (258)
T d1iy8a_           2 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTE--   79 (258)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHH--
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHH--
Confidence            689999999999999999999999999999999999999999999999888788999999999999999999999998  


Q ss_pred             hccCCCCCeeEEEecCCccc---CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          137 LDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                          ++++||+||||||+..   +..+++.++|+++|++|+.|+++++|+++|+|++++ .|+||++||.++.       
T Consensus        80 ----~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~-------  147 (258)
T d1iy8a_          80 ----RFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQG-SGMVVNTASVGGI-------  147 (258)
T ss_dssp             ----HHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGT-------
T ss_pred             ----HhCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhc-CCCCcccccHhhc-------
Confidence                5688999999999763   455789999999999999999999999999998876 7999999999998       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh-------HHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS-------FLSLM  286 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~-------~~~~~  286 (365)
                                   .+.++..+|++||+|+.+|+++|++|++   +.||+||+|+||+|+|+|.+....       .....
T Consensus       148 -------------~~~~~~~~Y~asKaal~~lt~~lA~el~---~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~  211 (258)
T d1iy8a_         148 -------------RGIGNQSGYAAAKHGVVGLTRNSAVEYG---RYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAE  211 (258)
T ss_dssp             -------------SBCSSBHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHH
T ss_pred             -------------cCCCCchHHHHHHHHHHHHHHHHHHHhC---ccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHH
Confidence                         8889999999999999999999999998   899999999999999999764321       11112


Q ss_pred             HHHHHHHhcCCCCHHHHHHHHHHHhcCCC---CCcccEEeCCCCccc
Q 017812          287 AFTVLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRTV  330 (365)
Q Consensus       287 ~~~~~~~~~~~~~p~e~A~~i~~~~l~~~---~~~G~~~~~~~g~~~  330 (365)
                      ......|++|+.+|+|+|+.++  ||+++   ..+|+.+.+|+|...
T Consensus       212 ~~~~~~pl~R~~~p~dvA~~v~--fL~S~~s~~itG~~i~VDGG~sa  256 (258)
T d1iy8a_         212 EFIQVNPSKRYGEAPEIAAVVA--FLLSDDASYVNATVVPIDGGQSA  256 (258)
T ss_dssp             HHHTTCTTCSCBCHHHHHHHHH--HHTSGGGTTCCSCEEEESTTTTT
T ss_pred             HHHhcCCCCCCcCHHHHHHHHH--HHhCchhcCCcCceEEcCcchhc
Confidence            2333458899999999999999  66665   458999999999754

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=7.3e-51  Score=360.41  Aligned_cols=237  Identities=22%  Similarity=0.294  Sum_probs=211.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      |++||+++||||++|||+++|++|+++|++|++++|++++++++.+++     +.+...+++|++|+++++++++++.+ 
T Consensus         1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~-   74 (243)
T d1q7ba_           1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYL-----GANGKGLMLNVTDPASIESVLEKIRA-   74 (243)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-----GGGEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh-----CCCCcEEEEEecCHHHhhhhhhhhhc-
Confidence            578999999999999999999999999999999999999999988887     34678999999999999999999998 


Q ss_pred             HhccCCCCCeeEEEecCCcc--cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                           .+++||+||||||+.  .+..+.+.++|++++++|+.|+++++|+++|+|++++ .|+||++||.++.       
T Consensus        75 -----~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~II~isS~~~~-------  141 (243)
T d1q7ba_          75 -----EFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKR-HGRIITIGSVVGT-------  141 (243)
T ss_dssp             -----HTCSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHH-------
T ss_pred             -----ccCCcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcC-CCEeeeecchhhc-------
Confidence                 678999999999987  3456889999999999999999999999999999876 7999999999998       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  293 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  293 (365)
                                   .+.++.++|++||+|+++|+++|+.|++   ++||+||+|+||+|+|++.+...+... .......|
T Consensus       142 -------------~~~~~~~~Y~asKaal~~lt~~lA~ela---~~gIrVN~I~PG~i~T~~~~~~~~~~~-~~~~~~~p  204 (243)
T d1q7ba_         142 -------------MGNGGQANYAAAKAGLIGFSKSLAREVA---SRGITVNVVAPGFIETDMTRALSDDQR-AGILAQVP  204 (243)
T ss_dssp             -------------HCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCCHHHHTSCHHHH-HHHHTTCT
T ss_pred             -------------CCCCCCHHHHHHHHHHHHHHHHHHHHhC---ccCeEEEEEecceEechhhhhhhhhHH-HHHHhcCC
Confidence                         7889999999999999999999999998   899999999999999999887654332 22334468


Q ss_pred             hcCCCCHHHHHHHHHHHhcCCC---CCcccEEeCCCCccc
Q 017812          294 LGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRTV  330 (365)
Q Consensus       294 ~~~~~~p~e~A~~i~~~~l~~~---~~~G~~~~~~~g~~~  330 (365)
                      ++|+.+|||+|+.+++  |+++   ..+|+.+.+|+|..+
T Consensus       205 l~R~~~pedvA~~v~f--L~S~~s~~itGq~i~vdGG~~~  242 (243)
T d1q7ba_         205 AGRLGGAQEIANAVAF--LASDEAAYITGETLHVNGGMYM  242 (243)
T ss_dssp             TSSCBCHHHHHHHHHH--HHSGGGTTCCSCEEEESTTSSC
T ss_pred             CCCCCCHHHHHHHHHH--HhCchhcCCcCCeEEECCCeEe
Confidence            8999999999999995  4444   468999999998653

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=1.6e-50  Score=360.17  Aligned_cols=239  Identities=22%  Similarity=0.317  Sum_probs=210.0

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      .++++|++|||||++|||+++|++|+++|++|++++|++++++++.+++++.  +.++.++++|++|+++++++++++.+
T Consensus         6 f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~--g~~~~~~~~Dvt~~~~v~~~~~~~~~   83 (251)
T d2c07a1           6 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF--GYESSGYAGDVSKKEEISEVINKILT   83 (251)
T ss_dssp             CCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            4588999999999999999999999999999999999999999999999776  45789999999999999999999998


Q ss_pred             HHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017812          135 WLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~  212 (365)
                            .+++||+||||||+..  +..+.+.++|++++++|+.++++++++++|+|++++ .|+||++||.++.      
T Consensus        84 ------~~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~IVnisS~~~~------  150 (251)
T d2c07a1          84 ------EHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNR-YGRIINISSIVGL------  150 (251)
T ss_dssp             ------HCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT-CEEEEEECCTHHH------
T ss_pred             ------hcCCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCC-CeEEEEECCHHhc------
Confidence                  6799999999999863  456789999999999999999999999999999886 7999999999998      


Q ss_pred             CCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHH
Q 017812          213 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLK  292 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~  292 (365)
                                    .+.++..+|++||+|+++|+++|++|++   +.||+||+|+||+|+|+|....++.. ........
T Consensus       151 --------------~~~~~~~~Y~asKaal~~ltr~lA~el~---~~gIrVN~V~PG~v~T~~~~~~~~~~-~~~~~~~~  212 (251)
T d2c07a1         151 --------------TGNVGQANYSSSKAGVIGFTKSLAKELA---SRNITVNAIAPGFISSDMTDKISEQI-KKNIISNI  212 (251)
T ss_dssp             --------------HCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCC-----CCHHH-HHHHHTTC
T ss_pred             --------------CCCCCCHHHHHHHHHHHHHHHHHHHHhh---hhCeEEEEEccCCEecccccccCHHH-HHHHHhcC
Confidence                          7888999999999999999999999998   89999999999999999988765433 22333446


Q ss_pred             HhcCCCCHHHHHHHHHHHhcCCC---CCcccEEeCCCCc
Q 017812          293 LLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGR  328 (365)
Q Consensus       293 ~~~~~~~p~e~A~~i~~~~l~~~---~~~G~~~~~~~g~  328 (365)
                      |++|+.+|+|+|++++  +|+++   ..+|+.+.+|+|.
T Consensus       213 pl~R~~~pedvA~~v~--fL~S~~s~~itG~~i~vDGG~  249 (251)
T d2c07a1         213 PAGRMGTPEEVANLAC--FLSSDKSGYINGRVFVIDGGL  249 (251)
T ss_dssp             TTSSCBCHHHHHHHHH--HHHSGGGTTCCSCEEEESTTS
T ss_pred             CCCCCcCHHHHHHHHH--HHhCchhCCCcCcEEEECCCc
Confidence            8899999999999999  44454   4589999999884

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=3e-50  Score=358.19  Aligned_cols=242  Identities=24%  Similarity=0.350  Sum_probs=212.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      +++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.+ +.++.++++|++|+++++++++++.+ 
T Consensus         2 ~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~-g~~~~~~~~Dv~~~~~v~~~~~~~~~-   79 (251)
T d1vl8a_           2 DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKY-GVETMAFRCDVSNYEEVKKLLEAVKE-   79 (251)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHh-CCcEEEEEccCCCHHHHHHHHHHHHH-
Confidence            5899999999999999999999999999999999999999999999987765 45789999999999999999999998 


Q ss_pred             HhccCCCCCeeEEEecCCcc--cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                           ++++||+||||||+.  .+..+++.++|++++++|+.|+++++|+++|+|++++ .|+||+++|..+.       
T Consensus        80 -----~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Ii~i~S~~~~-------  146 (251)
T d1vl8a_          80 -----KFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESD-NPSIINIGSLTVE-------  146 (251)
T ss_dssp             -----HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCS-SCEEEEECCGGGT-------
T ss_pred             -----HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccc-cccccccccchhc-------
Confidence                 558899999999986  4556889999999999999999999999999999887 7999999997764       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH-HHHHHHHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF-LSLMAFTVLK  292 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~  292 (365)
                                  ..+.++..+|++||+|+++|+++|+.|++   ++||+||+|+||+|+|+|.+..... ..........
T Consensus       147 ------------~~~~~~~~~Y~asKaal~~lt~~lA~e~~---~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~  211 (251)
T d1vl8a_         147 ------------EVTMPNISAYAASKGGVASLTKALAKEWG---RYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRI  211 (251)
T ss_dssp             ------------CCCSSSCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTC
T ss_pred             ------------cccCccccchHHHHHhHHHHHHHHHHHhc---ccCeEEEEEeeCcccCHHHHhccCCHHHHHHHHhcC
Confidence                        14677889999999999999999999998   8999999999999999998764322 2223344456


Q ss_pred             HhcCCCCHHHHHHHHHHHhcCCC---CCcccEEeCCCCcc
Q 017812          293 LLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRT  329 (365)
Q Consensus       293 ~~~~~~~p~e~A~~i~~~~l~~~---~~~G~~~~~~~g~~  329 (365)
                      |++|+.+|||+|+.++  ||+++   ..+|+.+.+|+|..
T Consensus       212 pl~R~~~pedvA~~v~--fL~S~~a~~itG~~i~vDGG~t  249 (251)
T d1vl8a_         212 PLGRTGVPEDLKGVAV--FLASEEAKYVTGQIIFVDGGWT  249 (251)
T ss_dssp             TTSSCBCGGGGHHHHH--HHHSGGGTTCCSCEEEESTTGG
T ss_pred             CCCCCCCHHHHHHHHH--HHhCchhCCCcCcEEEeCcCee
Confidence            8999999999999999  55554   45899999999864

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=2.6e-50  Score=360.20  Aligned_cols=243  Identities=24%  Similarity=0.255  Sum_probs=189.3

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      .+|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.  +.++..+.||++++++++++++++.+
T Consensus         4 F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~   81 (259)
T d1xq1a_           4 WSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK--GFQVTGSVCDASLRPEREKLMQTVSS   81 (259)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCceEEEeccCCCHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999999999999999999876  45799999999999999999999988


Q ss_pred             HHhccCCCCCeeEEEecCCcc--cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017812          135 WLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~  212 (365)
                      .+     .+++|+||||||+.  .+..+.+.++|++++++|+.|+++++++++|+|++++ .|+||++||..+.      
T Consensus        82 ~~-----~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~------  149 (259)
T d1xq1a_          82 MF-----GGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASG-CGNIIFMSSIAGV------  149 (259)
T ss_dssp             HH-----TTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-SCEEEEEC-----------
T ss_pred             Hh-----CCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccc-ccccccccccccc------
Confidence            33     26899999999987  4556889999999999999999999999999999876 7999999999998      


Q ss_pred             CCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHH
Q 017812          213 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLK  292 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~  292 (365)
                                    .+.++..+|++||+|+.+|+++|+.|++   +.||+||+|+||+|+|+|.................
T Consensus       150 --------------~~~~~~~~Y~asKaal~~lt~~lA~e~~---~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~  212 (259)
T d1xq1a_         150 --------------VSASVGSIYSATKGALNQLARNLACEWA---SDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRK  212 (259)
T ss_dssp             -------------------CCHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEECCSCC--------------------
T ss_pred             --------------ccccccccccccccchhhhhHHHHHHhc---ccCeEEEEeccCcccCHHhhhhchHHHHHHHHhCC
Confidence                          7888899999999999999999999998   89999999999999999987754433334445567


Q ss_pred             HhcCCCCHHHHHHHHHHHhcCCC---CCcccEEeCCCCccc
Q 017812          293 LLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRTV  330 (365)
Q Consensus       293 ~~~~~~~p~e~A~~i~~~~l~~~---~~~G~~~~~~~g~~~  330 (365)
                      |++|+.+|||+|++++  ||+++   ..+|+.+.+|+|..+
T Consensus       213 pl~R~~~pedvA~~v~--fL~S~~s~~iTG~~i~vDGG~s~  251 (259)
T d1xq1a_         213 PLGRFGEPEEVSSLVA--FLCMPAASYITGQTICVDGGLTV  251 (259)
T ss_dssp             -----CCGGGGHHHHH--HHTSGGGTTCCSCEEECCCCEEE
T ss_pred             CCCCCcCHHHHHHHHH--HHhCchhcCCcCcEEEeCCCEEC
Confidence            8999999999999999  56665   458999999999765

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=100.00  E-value=5.6e-50  Score=356.58  Aligned_cols=239  Identities=26%  Similarity=0.349  Sum_probs=212.5

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      |+||++|||||++|||+++|++|+++|++|++++|++++++++.+++..   +.++.++++|++|+++++++++++.+  
T Consensus         4 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~--   78 (251)
T d1zk4a1           4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT---PDQIQFFQHDSSDEDGWTKLFDATEK--   78 (251)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC---TTTEEEEECCTTCHHHHHHHHHHHHH--
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCC---CCcEEEEEccCCCHHHHHHHHHHHHH--
Confidence            7899999999999999999999999999999999999999999888853   45789999999999999999999998  


Q ss_pred             hccCCCCCeeEEEecCCcc--cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017812          137 LDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  214 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~  214 (365)
                          .+++||+||||||+.  .+..+++.++|++++++|+.|+++++++++|+|++++.+|+||++||.++.        
T Consensus        79 ----~~G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~--------  146 (251)
T d1zk4a1          79 ----AFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGF--------  146 (251)
T ss_dssp             ----HHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGT--------
T ss_pred             ----HhCCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeecccee--------
Confidence                558899999999987  456688999999999999999999999999999988745699999999998        


Q ss_pred             CccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHH--hCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHH
Q 017812          215 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRN--LGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLK  292 (365)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e--~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~  292 (365)
                                  .+.++..+|++||+|+.+|++++++|  +.   ++||+||+|+||+|+|+|....+............
T Consensus       147 ------------~~~~~~~~Y~asKaal~~lt~~lA~e~~l~---~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~  211 (251)
T d1zk4a1         147 ------------VGDPSLGAYNASKGAVRIMSKSAALDCALK---DYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKT  211 (251)
T ss_dssp             ------------SCCTTCHHHHHHHHHHHHHHHHHHHHHHHT---TCSEEEEEEEECCBCCHHHHTSTTHHHHHTSTTTC
T ss_pred             ------------ccCCCchhHHHHHHHHhcchHHHHHHHhcC---CCcEEEEEEeCCCCCChhHHhcCCHHHHHHHHhCC
Confidence                        88899999999999999999999998  55   78999999999999999988776544443334446


Q ss_pred             HhcCCCCHHHHHHHHHHHhcCCC---CCcccEEeCCCCcc
Q 017812          293 LLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRT  329 (365)
Q Consensus       293 ~~~~~~~p~e~A~~i~~~~l~~~---~~~G~~~~~~~g~~  329 (365)
                      |++|+.+|||+|+.+++  |+++   ..+|+.+.+|+|..
T Consensus       212 pl~R~~~pedvA~~v~f--L~S~~s~~itG~~i~vDGG~t  249 (251)
T d1zk4a1         212 PMGHIGEPNDIAYICVY--LASNESKFATGSEFVVDGGYT  249 (251)
T ss_dssp             TTSSCBCHHHHHHHHHH--HHSGGGTTCCSCEEEESTTGG
T ss_pred             CCCCCcCHHHHHHHHHH--HhCchhCCCcCcEEEECcccc
Confidence            88999999999999994  4454   46899999999864

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=100.00  E-value=6e-50  Score=358.05  Aligned_cols=246  Identities=21%  Similarity=0.308  Sum_probs=215.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCch-hHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH-LLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      ||+||++|||||++|||+++|++|+++|++|++++|+.+ .++++.+++++.  +.++.++++|++|+++++++++++.+
T Consensus         4 dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~--g~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (261)
T d1geea_           4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKV--GGEAIAVKGDVTVESDVINLVQSAIK   81 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            689999999999999999999999999999999999864 678888888776  56889999999999999999999998


Q ss_pred             HHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017812          135 WLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~  212 (365)
                            ++++||+||||||+..  +..+++.++|++++++|+.|+++++++++|+|++++.+++||++||.++.      
T Consensus        82 ------~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~------  149 (261)
T d1geea_          82 ------EFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEK------  149 (261)
T ss_dssp             ------HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGT------
T ss_pred             ------HhCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhc------
Confidence                  5588999999999874  45678999999999999999999999999999888755679999999988      


Q ss_pred             CCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh-HHHHHHHHHH
Q 017812          213 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS-FLSLMAFTVL  291 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~-~~~~~~~~~~  291 (365)
                                    .+.++..+|++||+|+++|+++|+.|++   ++||+||+|+||+|+|++...... ..........
T Consensus       150 --------------~~~~~~~~Y~asKaal~~lt~~lA~e~~---~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~  212 (261)
T d1geea_         150 --------------IPWPLFVHYAASKGGMKLMTETLALEYA---PKGIRVNNIGPGAINTPINAEKFADPEQRADVESM  212 (261)
T ss_dssp             --------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTT
T ss_pred             --------------ccCccccccccCCccchhhHHHHHHHhh---hhCcEEEEEeeCcCcCHhHhhhcCCHHHHHHHHhc
Confidence                          8889999999999999999999999998   899999999999999999865422 2222233444


Q ss_pred             HHhcCCCCHHHHHHHHHHHhcCCC---CCcccEEeCCCCccccCCc
Q 017812          292 KLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRTVNSSA  334 (365)
Q Consensus       292 ~~~~~~~~p~e~A~~i~~~~l~~~---~~~G~~~~~~~g~~~~~~~  334 (365)
                      .|++|+.+|||+|++++  ||+++   ..+|+.+.+|+|..+.++.
T Consensus       213 ~pl~R~~~pediA~~v~--fL~S~~s~~itG~~i~vDGG~sl~p~~  256 (261)
T d1geea_         213 IPMGYIGEPEEIAAVAA--WLASSEASYVTGITLFADGGMTLYPSF  256 (261)
T ss_dssp             CTTSSCBCHHHHHHHHH--HHHSGGGTTCCSCEEEESTTGGGCGGG
T ss_pred             CCCCCCCCHHHHHHHHH--HHhCchhcCCcCCeEEECCCeeCCCCC
Confidence            68899999999999999  55554   4689999999999886543

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=100.00  E-value=1.3e-49  Score=355.43  Aligned_cols=238  Identities=22%  Similarity=0.278  Sum_probs=211.2

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      ++||+++||||++|||+++|++|+++|++|++++|+.++++++.+++     +.++.++++|++|+++++++++++.+  
T Consensus         3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~-----~~~~~~~~~Dvt~~~~v~~~~~~~~~--   75 (256)
T d1k2wa_           3 LDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI-----GPAACAIALDVTDQASIDRCVAELLD--   75 (256)
T ss_dssp             TTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHHH--
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----CCceEEEEeeCCCHHHHHHHHHHHHH--
Confidence            78999999999999999999999999999999999999999988887     56789999999999999999999998  


Q ss_pred             hccCCCCCeeEEEecCCcc--cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017812          137 LDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  214 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~  214 (365)
                          ++++||+||||||+.  .+..+++.++|++++++|+.|+++++++++|.|.++++.|+||++||.++.        
T Consensus        76 ----~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~--------  143 (256)
T d1k2wa_          76 ----RWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGR--------  143 (256)
T ss_dssp             ----HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT--------
T ss_pred             ----HhCCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhc--------
Confidence                558899999999986  455688999999999999999999999999987665547999999999998        


Q ss_pred             CccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH----------HH
Q 017812          215 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF----------LS  284 (365)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~----------~~  284 (365)
                                  .+.++..+|++||+|+++|+++|++|++   +.||+||+|+||+++|++.+.....          ..
T Consensus       144 ------------~~~~~~~~Y~asKaal~~lt~~lA~el~---~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~  208 (256)
T d1k2wa_         144 ------------RGEALVGVYCATKAAVISLTQSAGLNLI---RHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEK  208 (256)
T ss_dssp             ------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHH
T ss_pred             ------------cccccccchhhhhhHHHHHHHHHHHHhc---ccCeEEEEEecCCCCchhhhhhhhhhhhhccCChHHH
Confidence                        8899999999999999999999999998   8999999999999999997654321          11


Q ss_pred             HHHHHHHHHhcCCCCHHHHHHHHHHHhcCCC---CCcccEEeCCCCccc
Q 017812          285 LMAFTVLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRTV  330 (365)
Q Consensus       285 ~~~~~~~~~~~~~~~p~e~A~~i~~~~l~~~---~~~G~~~~~~~g~~~  330 (365)
                      ........|++|+.+|+|+|+.++  ||+++   ..+|+.+.+|+|..+
T Consensus       209 ~~~~~~~~PlgR~~~p~evA~~v~--fL~S~~a~~iTG~~i~vDGG~~m  255 (256)
T d1k2wa_         209 KRQVGAAVPFGRMGRAEDLTGMAI--FLATPEADYIVAQTYNVDGGNWM  255 (256)
T ss_dssp             HHHHHHHSTTSSCBCHHHHHHHHH--HTTSGGGTTCCSCEEEESTTSSC
T ss_pred             HHHHHhcCCCCCCcCHHHHHHHHH--HHhCchhCCccCceEEECcchhh
Confidence            223344568999999999999999  67776   458999999999764

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=100.00  E-value=9e-50  Score=357.49  Aligned_cols=240  Identities=25%  Similarity=0.275  Sum_probs=204.9

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCc-hhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS-HLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      |+||++|||||++|||+++|++|+++|++|++++|+. +.++++.+++.+.+ +.++.++++|++|+++++++++++.+ 
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~-g~~~~~~~~Dv~~~~~v~~~~~~~~~-   79 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQH-GVKVLYDGADLSKGEAVRGLVDNAVR-   79 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHH-TSCEEEECCCTTSHHHHHHHHHHHHH-
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhc-CCcEEEEECCCCCHHHHHHHHHHHHH-
Confidence            6899999999999999999999999999999999974 66888888887665 56899999999999999999999998 


Q ss_pred             HhccCCCCCeeEEEecCCcc--cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                           .+++||+||||||+.  .+..+.+.++|+++|++|+.|+++++++++|+|++++ .|+||++||.++.       
T Consensus        80 -----~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~-------  146 (260)
T d1x1ta1          80 -----QMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQG-FGRIINIASAHGL-------  146 (260)
T ss_dssp             -----HHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT-------
T ss_pred             -----HhCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcC-CceEeecccccce-------
Confidence                 558899999999987  3456889999999999999999999999999999876 7999999999998       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHH----------
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFL----------  283 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~----------  283 (365)
                                   .+.+++.+|++||+|+++|+++|+.|++   +.||+||+|+||+|+|+|........          
T Consensus       147 -------------~~~~~~~~Y~asKaal~~lt~~lA~el~---~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~  210 (260)
T d1x1ta1         147 -------------VASANKSAYVAAKHGVVGFTKVTALETA---GQGITANAICPGWVRTPLVEKQISALAEKNGVDQET  210 (260)
T ss_dssp             -------------SCCTTCHHHHHHHHHHHHHHHHHHHHHT---TTTEEEEEEEECCBCC--------------------
T ss_pred             -------------eccCCcchhhhhhhhHHHhHHHHHHHhc---hhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHH
Confidence                         8889999999999999999999999998   89999999999999999986542211          


Q ss_pred             -HHHHHHHHHHhcCCCCHHHHHHHHHHHhcCCC---CCcccEEeCCCCcc
Q 017812          284 -SLMAFTVLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRT  329 (365)
Q Consensus       284 -~~~~~~~~~~~~~~~~p~e~A~~i~~~~l~~~---~~~G~~~~~~~g~~  329 (365)
                       .........|++|+.+|+|+|+.+++  |+++   ..+|+.+.+|+|-.
T Consensus       211 ~~~~~~~~~~Pl~R~g~pediA~~v~f--L~S~~a~~itG~~i~vDGG~t  258 (260)
T d1x1ta1         211 AARELLSEKQPSLQFVTPEQLGGTAVF--LASDAAAQITGTTVSVDGGWT  258 (260)
T ss_dssp             ----CHHHHCTTCCCBCHHHHHHHHHH--HHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHhcCCCCCCcCHHHHHHHHHH--HhChhhCCCcCCEEEECcchh
Confidence             01113344688999999999999995  4444   56899999999854

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=100.00  E-value=1.6e-49  Score=355.22  Aligned_cols=242  Identities=23%  Similarity=0.315  Sum_probs=213.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      +|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.  +.++.++++|++|+++++++++++.+ 
T Consensus         5 ~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~~-   81 (259)
T d2ae2a_           5 NLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK--GFKVEASVCDLSSRSERQELMNTVAN-   81 (259)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCCceEEEeeCCCHHHHHHHHHHHHH-
Confidence            689999999999999999999999999999999999999999999999876  56889999999999999999999887 


Q ss_pred             HhccCCCC-CeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017812          136 LLDSDMHS-SIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       136 ~~~~~~~~-~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~  212 (365)
                           +++ ++|+||||||+..  +..+.+.++|++++++|+.|+++++++++|+|++++ .|+||++||.++.      
T Consensus        82 -----~~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~------  149 (259)
T d2ae2a_          82 -----HFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASE-RGNVVFISSVSGA------  149 (259)
T ss_dssp             -----HTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTS-SEEEEEECCGGGT------
T ss_pred             -----HhCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhc-ccccccccccccc------
Confidence                 344 7999999999863  456889999999999999999999999999999887 7999999999998      


Q ss_pred             CCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh---HHH-HHHH
Q 017812          213 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS---FLS-LMAF  288 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~---~~~-~~~~  288 (365)
                                    .+.++..+|++||+|+++|+++|++|++   +.||+||+|+||+|+|++.+....   ... ....
T Consensus       150 --------------~~~~~~~~Y~asKaal~~lt~~lA~el~---~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~  212 (259)
T d2ae2a_         150 --------------LAVPYEAVYGATKGAMDQLTRCLAFEWA---KDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKL  212 (259)
T ss_dssp             --------------SCCTTCHHHHHHHHHHHHHHHHHHHHTG---GGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHH
T ss_pred             --------------cccccccchHHHHHHHHHHHHHHHHHhC---cCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHH
Confidence                          8889999999999999999999999998   889999999999999999765322   111 1223


Q ss_pred             HHHHHhcCCCCHHHHHHHHHHHhcCCC---CCcccEEeCCCCcccc
Q 017812          289 TVLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRTVN  331 (365)
Q Consensus       289 ~~~~~~~~~~~p~e~A~~i~~~~l~~~---~~~G~~~~~~~g~~~~  331 (365)
                      ....|++|+.+|+|+|+.++  ||+++   ..+|+.+.+|+|....
T Consensus       213 ~~~~pl~R~g~pedvA~~v~--fL~S~~s~~itG~~i~VDGG~~a~  256 (259)
T d2ae2a_         213 IDRCALRRMGEPKELAAMVA--FLCFPAASYVTGQIIYVDGGLMAN  256 (259)
T ss_dssp             HHTSTTCSCBCHHHHHHHHH--HHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HhcCCCCCCcCHHHHHHHHH--HHhCchhCCCcCcEEEECCCeEee
Confidence            34468899999999999999  55554   4689999999997653

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=8.4e-50  Score=353.18  Aligned_cols=234  Identities=21%  Similarity=0.282  Sum_probs=209.7

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      |+||++|||||++|||+++|++|+++|++|++++|++++++++.+++     +.++.++++|++|+++++++++++.+  
T Consensus         4 L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~--   76 (244)
T d1nffa_           4 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL-----ADAARYVHLDVTQPAQWKAAVDTAVT--   76 (244)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-----GGGEEEEECCTTCHHHHHHHHHHHHH--
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----hCcceEEEeecCCHHHHHHHHHHHHH--
Confidence            78999999999999999999999999999999999999998888887     34688999999999999999999998  


Q ss_pred             hccCCCCCeeEEEecCCcc--cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017812          137 LDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  214 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~  214 (365)
                          .++++|+||||||+.  .+..+++.++|++++++|+.|+++++|.++|+|++++ .|+||++||.++.        
T Consensus        77 ----~~g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~--------  143 (244)
T d1nffa_          77 ----AFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAG-RGSIINISSIEGL--------  143 (244)
T ss_dssp             ----HHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT--------
T ss_pred             ----HhCCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcC-cceEEeccccccc--------
Confidence                558899999999986  4566889999999999999999999999999999876 7999999999998        


Q ss_pred             CccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHh
Q 017812          215 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLL  294 (365)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  294 (365)
                                  .+.++..+|++||+|+++|++++++|++   +.||+||+|+||+|+|+|....+....      ..|+
T Consensus       144 ------------~~~~~~~~Y~asKaal~~ltk~lA~el~---~~gIrVN~I~PG~i~T~~~~~~~~~~~------~~pl  202 (244)
T d1nffa_         144 ------------AGTVACHGYTATKFAVRGLTKSTALELG---PSGIRVNSIHPGLVKTPMTDWVPEDIF------QTAL  202 (244)
T ss_dssp             ------------SCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECCBCSGGGTTSCTTCS------CCSS
T ss_pred             ------------cccccccchhhHHHHHHHHHHHHHHHhc---ccCEEEEEEeeCCccChhHhhhhHHHH------hccc
Confidence                        8889999999999999999999999998   899999999999999999876654321      2578


Q ss_pred             cCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCcccc
Q 017812          295 GLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTVN  331 (365)
Q Consensus       295 ~~~~~p~e~A~~i~~~~l~-~~~~~G~~~~~~~g~~~~  331 (365)
                      +|+.+|+|+|+.+++++.. +...+|+.+.+|+|....
T Consensus       203 ~R~~~p~diA~~v~fL~s~~s~~itG~~i~vDGG~~ag  240 (244)
T d1nffa_         203 GRAAEPVEVSNLVVYLASDESSYSTGAEFVVDGGTVAG  240 (244)
T ss_dssp             SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGS
T ss_pred             cCCCCHHHHHHHHHHHhChhhCCCcCCEEEECCCeecc
Confidence            8999999999999954432 235689999999998764

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=1.4e-49  Score=355.57  Aligned_cols=237  Identities=25%  Similarity=0.301  Sum_probs=208.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      +||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.  +.++.++++|++|+++++++++++.+   
T Consensus         1 DgKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~--g~~~~~~~~Dvs~~~~v~~~~~~~~~---   75 (257)
T d2rhca1           1 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA--GVEADGRTCDVRSVPEIEALVAAVVE---   75 (257)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH---
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeecCCHHHHHHHHHHHHH---
Confidence            4899999999999999999999999999999999999999999999876  56799999999999999999999998   


Q ss_pred             ccCCCCCeeEEEecCCcc--cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhh--hcCCCCCeEEEEcCCcccccccccC
Q 017812          138 DSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLL--KNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~--~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                         ++++||+||||||+.  .+..+++.++|++++++|+.|+++++++++|+|  .+++ .|+||++||.++.       
T Consensus        76 ---~~g~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~-~g~Ii~i~S~~~~-------  144 (257)
T d2rhca1          76 ---RYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERG-TGRIVNIASTGGK-------  144 (257)
T ss_dssp             ---HTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHT-EEEEEEECCGGGT-------
T ss_pred             ---HhCCCCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcC-Ccccccccccccc-------
Confidence               679999999999987  345688999999999999999999999999974  4444 6899999999998       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH----------H
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF----------L  283 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~----------~  283 (365)
                                   .+.+++.+|++||+|+.+|+++|+.|++   +.||+||+|+||+|+|+|.+.....          .
T Consensus       145 -------------~~~~~~~~Y~asKaal~~ltk~lA~el~---~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e  208 (257)
T d2rhca1         145 -------------QGVVHAAPYSASKHGVVGFTKALGLELA---RTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEE  208 (257)
T ss_dssp             -------------SCCTTCHHHHHHHHHHHHHHHHHHHHTT---TSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHH
T ss_pred             -------------cccccchhHHHHHHHHHHHHHHHHHHhh---hhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHH
Confidence                         8889999999999999999999999998   8999999999999999997654221          1


Q ss_pred             HHHHHHHHHHhcCCCCHHHHHHHHHHHhcCCC---CCcccEEeCCCCc
Q 017812          284 SLMAFTVLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGR  328 (365)
Q Consensus       284 ~~~~~~~~~~~~~~~~p~e~A~~i~~~~l~~~---~~~G~~~~~~~g~  328 (365)
                      .........|++|+.+|+|+|+.++  ||+++   ..+|+.+.+|+|-
T Consensus       209 ~~~~~~~~~PlgR~~~pedia~~v~--fL~S~~s~~itG~~i~vDGG~  254 (257)
T d2rhca1         209 AFDRITARVPIGRYVQPSEVAEMVA--YLIGPGAAAVTAQALNVCGGL  254 (257)
T ss_dssp             HHHHHHTTSTTSSCBCHHHHHHHHH--HHTSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHHhcCCCCCCcCHHHHHHHHH--HHhCchhcCCcCceEEECcCc
Confidence            1222334468899999999999999  56654   4689999999884

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=100.00  E-value=2.6e-49  Score=353.35  Aligned_cols=239  Identities=25%  Similarity=0.342  Sum_probs=210.8

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhc
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  138 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~  138 (365)
                      .|+||||||++|||+++|++|+++|++|++++|++++++++.+++.+.  +.++.+++||++|+++++++++++.+    
T Consensus         1 KKValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~~----   74 (255)
T d1gega_           1 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA--GGHAVAVKVDVSDRDQVFAAVEQARK----   74 (255)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHH----
T ss_pred             CCEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHHH----
Confidence            378999999999999999999999999999999999999999999876  45789999999999999999999998    


Q ss_pred             cCCCCCeeEEEecCCcc--cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017812          139 SDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  216 (365)
Q Consensus       139 ~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~  216 (365)
                        .+++||+||||||+.  .+..+++.++|++++++|+.|+++++++++|+|.+++..++||++||.++.          
T Consensus        75 --~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~----------  142 (255)
T d1gega_          75 --TLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGH----------  142 (255)
T ss_dssp             --HTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT----------
T ss_pred             --HhCCccEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhc----------
Confidence              678999999999986  345688999999999999999999999999988777657899999999998          


Q ss_pred             cccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHH----------HH
Q 017812          217 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLS----------LM  286 (365)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~----------~~  286 (365)
                                .+.++..+|++||+|+++|+++|+.|++   +.||+||+|+||+|+|++.........          ..
T Consensus       143 ----------~~~~~~~~Y~asKaal~~ltk~lA~el~---~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~  209 (255)
T d1gega_         143 ----------VGNPELAVYSSSKFAVRGLTQTAARDLA---PLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTA  209 (255)
T ss_dssp             ----------SCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHH
T ss_pred             ----------ccCcccccchhCHHHHHhhHHHHHHHhh---hhCcEEEEEecCcccChHHhhhhhhhHhhhcccchhHHH
Confidence                      8889999999999999999999999998   899999999999999999765433211          11


Q ss_pred             HHHHHHHhcCCCCHHHHHHHHHHHhcCCC---CCcccEEeCCCCccc
Q 017812          287 AFTVLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRTV  330 (365)
Q Consensus       287 ~~~~~~~~~~~~~p~e~A~~i~~~~l~~~---~~~G~~~~~~~g~~~  330 (365)
                      ......|++|+.+|+|+|+.++  ||+++   ..+|+.+.+|+|..+
T Consensus       210 ~~~~~~pl~R~~~peevA~~v~--fL~S~~a~~itG~~i~vDGG~~~  254 (255)
T d1gega_         210 EFAKRITLGRLSEPEDVAACVS--YLASPDSDYMTGQSLLIDGGMVF  254 (255)
T ss_dssp             HHHTTCTTCSCBCHHHHHHHHH--HHHSGGGTTCCSCEEEESSSSSC
T ss_pred             HHHhcCCCCCCcCHHHHHHHHH--HHhCchhCCccCcEEEecCCEEe
Confidence            2233458899999999999999  55554   458999999999654

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=100.00  E-value=2.6e-49  Score=354.27  Aligned_cols=238  Identities=23%  Similarity=0.277  Sum_probs=210.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      .++||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.  +.++..++||++|+++++++++++.+ 
T Consensus         2 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~~-   78 (260)
T d1zema1           2 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK--GVEARSYVCDVTSEEAVIGTVDSVVR-   78 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT--TSCEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHH-
Confidence            378999999999999999999999999999999999999999999999776  56789999999999999999999998 


Q ss_pred             HhccCCCCCeeEEEecCCcc---cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017812          136 LLDSDMHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~---~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~  212 (365)
                           .+++||+||||||+.   .+..+++.++|++++++|+.++++++++++|+|.+++ .|+||++||.++.      
T Consensus        79 -----~~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~-~G~II~isS~~~~------  146 (260)
T d1zema1          79 -----DFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQN-YGRIVNTASMAGV------  146 (260)
T ss_dssp             -----HHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHH------
T ss_pred             -----HhCCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhc-CCCCCeeechhhc------
Confidence                 568899999999976   3456889999999999999999999999999998876 7999999999998      


Q ss_pred             CCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh-----------
Q 017812          213 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS-----------  281 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~-----------  281 (365)
                                    .+.+++.+|++||+|+++|+++|+.|++   +.||+||+|+||+|+|++..+...           
T Consensus       147 --------------~~~~~~~~Y~asKaal~~ltk~lA~el~---~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~  209 (260)
T d1zema1         147 --------------KGPPNMAAYGTSKGAIIALTETAALDLA---PYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYF  209 (260)
T ss_dssp             --------------SCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTS
T ss_pred             --------------cCCcchHHHHHHHHHHHHHHHHHHHHhh---hhCCEEEEeccCcccCcchhhcchhhhhhhccccc
Confidence                          8889999999999999999999999998   899999999999999998643211           


Q ss_pred             ----HHHHHHHHHHHHhcCCCCHHHHHHHHHHHhcCCC---CCcccEEeCCCC
Q 017812          282 ----FLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKG  327 (365)
Q Consensus       282 ----~~~~~~~~~~~~~~~~~~p~e~A~~i~~~~l~~~---~~~G~~~~~~~g  327 (365)
                          ...........|++|+.+|+|+|+.++  ||+++   ..+|+.+.+|+|
T Consensus       210 ~~~~~~~~~~~~~~~Pl~R~g~pedvA~~v~--fL~S~~s~~itG~~i~VDGG  260 (260)
T d1zema1         210 STDPKVVAQQMIGSVPMRRYGDINEIPGVVA--FLLGDDSSFMTGVNLPIAGG  260 (260)
T ss_dssp             CSSHHHHHHHHHHTSTTSSCBCGGGSHHHHH--HHHSGGGTTCCSCEEEESCC
T ss_pred             ccCHHHHHHHHHhcCCCCCCcCHHHHHHHHH--HHhCchhcCccCCeEEeCCC
Confidence                111222334468899999999999999  55554   458999988886

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=100.00  E-value=2.5e-49  Score=351.56  Aligned_cols=237  Identities=24%  Similarity=0.275  Sum_probs=195.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      |+||++|||||++|||+++|++|+++|++|++++|++++  ++.+.+++.  +.++.++++|++|+++++++++++.+  
T Consensus         3 L~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~--~~~~~~~~~--g~~~~~~~~Dvs~~~~v~~~~~~~~~--   76 (247)
T d2ew8a1           3 LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAP--EAEAAIRNL--GRRVLTVKCDVSQPGDVEAFGKQVIS--   76 (247)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCH--HHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH--
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchH--HHHHHHHHc--CCcEEEEEeeCCCHHHHHHHHHHHHH--
Confidence            789999999999999999999999999999999998753  233344443  56899999999999999999999998  


Q ss_pred             hccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017812          137 LDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  214 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~  214 (365)
                          .+++||+||||||+..  +..+++.++|++++++|+.|+++++++++|+|++++ .|+||++||.++.        
T Consensus        77 ----~~G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~--------  143 (247)
T d2ew8a1          77 ----TFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNG-WGRIINLTSTTYW--------  143 (247)
T ss_dssp             ----HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGG--------
T ss_pred             ----HcCCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcC-CCCccccccchhc--------
Confidence                5688999999999873  456889999999999999999999999999999886 7999999999998        


Q ss_pred             CccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHH-HHHHHHH
Q 017812          215 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLM-AFTVLKL  293 (365)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~-~~~~~~~  293 (365)
                                  .+.++..+|++||+|+++|+++|+.|++   +.||+||+|+||+|+|++.+......... ......|
T Consensus       144 ------------~~~~~~~~Y~asKaal~~ltk~lA~ela---~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~  208 (247)
T d2ew8a1         144 ------------LKIEAYTHYISTKAANIGFTRALASDLG---KDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQA  208 (247)
T ss_dssp             ------------SCCSSCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECCC------------------CTTSS
T ss_pred             ------------ccCcccccchhhhccHHHHHHHHHHHhc---ccCeEEEEEeeCCCCCccccccccchhHHHHHHHhcc
Confidence                        8889999999999999999999999998   89999999999999999987543322111 1112246


Q ss_pred             hcCCCCHHHHHHHHHHHhcCCC---CCcccEEeCCCCcc
Q 017812          294 LGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRT  329 (365)
Q Consensus       294 ~~~~~~p~e~A~~i~~~~l~~~---~~~G~~~~~~~g~~  329 (365)
                      ++|+.+|||+|+.++  ||+++   ..+|+.+.+|+|..
T Consensus       209 l~r~~~pedvA~~v~--fL~S~~s~~itG~~i~vDGG~~  245 (247)
T d2ew8a1         209 IPRLQVPLDLTGAAA--FLASDDASFITGQTLAVDGGMV  245 (247)
T ss_dssp             SCSCCCTHHHHHHHH--HHTSGGGTTCCSCEEEESSSCC
T ss_pred             CCCCCCHHHHHHHHH--HHhCchhcCCcCCeEEECCCEe
Confidence            789999999999999  56655   45899999999864

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.7e-49  Score=351.34  Aligned_cols=238  Identities=20%  Similarity=0.258  Sum_probs=206.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      .++||++|||||++|||+++|++|+++|++|++++|++++++++.+++      .++.+++||++|+++++++++++.+ 
T Consensus         3 rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~------~~~~~~~~Dvs~~~~v~~~~~~~~~-   75 (250)
T d1ydea1           3 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL------PGAVFILCDVTQEDDVKTLVSETIR-   75 (250)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC------TTEEEEECCTTSHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc------CCCeEEEccCCCHHHHHHHHHHHHH-
Confidence            478999999999999999999999999999999999999888777664      3578999999999999999999998 


Q ss_pred             HhccCCCCCeeEEEecCCccc---CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017812          136 LLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~  212 (365)
                           ++++||+||||||+..   +..+++.++|++++++|+.|+++++++++|+|++++  |+||++||.++.      
T Consensus        76 -----~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~--G~Ii~isS~~~~------  142 (250)
T d1ydea1          76 -----RFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQ--GNVINISSLVGA------  142 (250)
T ss_dssp             -----HHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCHHHH------
T ss_pred             -----hcCCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCC--CCCccccccccc------
Confidence                 5688999999999753   345789999999999999999999999999998754  999999999998      


Q ss_pred             CCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccch----h-HHHHHH
Q 017812          213 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP----S-FLSLMA  287 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~----~-~~~~~~  287 (365)
                                    .+.++..+|++||+|+++|+++|++|++   +.||+||+|+||+|+|+|.++..    . ......
T Consensus       143 --------------~~~~~~~~Y~asKaal~~lt~~lA~e~a---~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~  205 (250)
T d1ydea1         143 --------------IGQAQAVPYVATKGAVTAMTKALALDES---PYGVRVNCISPGNIWTPLWEELAALMPDPRASIRE  205 (250)
T ss_dssp             --------------HCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHH
T ss_pred             --------------ccccCcchhHHHHhhHHHHHHHHHHHhc---ccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHH
Confidence                          7888999999999999999999999998   89999999999999999976432    1 112223


Q ss_pred             HHHHHHhcCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017812          288 FTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  330 (365)
Q Consensus       288 ~~~~~~~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~  330 (365)
                      .....|++|+.+|+|+|+++++++..+...+|+.+.+|+|..+
T Consensus       206 ~~~~~pl~R~g~p~eva~~v~fL~Sda~~itG~~i~vDGG~~l  248 (250)
T d1ydea1         206 GMLAQPLGRMGQPAEVGAAAVFLASEANFCTGIELLVTGGAEL  248 (250)
T ss_dssp             HHHTSTTSSCBCHHHHHHHHHHHHHHCTTCCSCEEEESTTTTS
T ss_pred             HHhcCCCCCCCCHHHHHHHHHHHhCccCCCcCCeEEECCCccc
Confidence            3334588999999999999996654334669999999999754

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=4.3e-49  Score=349.20  Aligned_cols=237  Identities=24%  Similarity=0.309  Sum_probs=208.8

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEe-cCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhc
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGFHVVLVG-RSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  138 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~~Vil~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~  138 (365)
                      ++||||||++|||+++|++|+++|++|++++ |+++.++++.+++++.  +.++.++++|++|+++++++++++.+    
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~~----   75 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAY--GGQAITFGGDVSKEADVEAMMKTAID----   75 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH--TCEEEEEECCTTSHHHHHHHHHHHHH----
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc--CCcEEEEeCCCCCHHHHHHHHHHHHH----
Confidence            5899999999999999999999999999875 5777888888888776  56889999999999999999999998    


Q ss_pred             cCCCCCeeEEEecCCcc--cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017812          139 SDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  216 (365)
Q Consensus       139 ~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~  216 (365)
                        ++++||+||||||+.  .+..+.+.++|++++++|+.|+++++|+++|+|++++ .|+||++||.++.          
T Consensus        76 --~~g~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~IVnisS~~~~----------  142 (244)
T d1edoa_          76 --AWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKR-KGRIINIASVVGL----------  142 (244)
T ss_dssp             --HSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHH----------
T ss_pred             --HcCCCCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcC-CcEEEEEcChhhc----------
Confidence              678999999999986  3456889999999999999999999999999998876 7999999999998          


Q ss_pred             cccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhcC
Q 017812          217 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGL  296 (365)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  296 (365)
                                .+.++..+|++||+|+.+|+++|+.|++   +.||+||+|+||+|+|+|.+..++... .......|++|
T Consensus       143 ----------~~~~~~~~Y~asKaal~~ltk~lA~el~---~~gIrvN~I~PG~i~T~~~~~~~~~~~-~~~~~~~pl~R  208 (244)
T d1edoa_         143 ----------IGNIGQANYAAAKAGVIGFSKTAAREGA---SRNINVNVVCPGFIASDMTAKLGEDME-KKILGTIPLGR  208 (244)
T ss_dssp             ----------HCCTTCHHHHHHHHHHHHHHHHHHHHHH---TTTEEEEEEEECSBCSHHHHTTCHHHH-HHHHTSCTTCS
T ss_pred             ----------CCCCCCHHHHHHHHHHHHChHHHHHHHh---hhCcEEEEEecceeccHHHHHhhHHHH-HHHHhcCCCCC
Confidence                      7888999999999999999999999998   899999999999999999887654332 23334468899


Q ss_pred             CCCHHHHHHHHHHHhcCCC--CCcccEEeCCCCcc
Q 017812          297 LQSPEKGINSVLDAALAPP--ETSGVYFFGGKGRT  329 (365)
Q Consensus       297 ~~~p~e~A~~i~~~~l~~~--~~~G~~~~~~~g~~  329 (365)
                      +.+|+|+|+.+++++++++  ..+|+.+.+|+|-.
T Consensus       209 ~~~p~dvA~~v~fLa~S~~a~~itG~~i~vdGG~s  243 (244)
T d1edoa_         209 TGQPENVAGLVEFLALSPAASYITGQAFTIDGGIA  243 (244)
T ss_dssp             CBCHHHHHHHHHHHHHCSGGGGCCSCEEEESTTTT
T ss_pred             CcCHHHHHHHHHHHHCCchhcCCcCCeEEeCCCee
Confidence            9999999999996544333  56899999999853

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.3e-48  Score=345.72  Aligned_cols=233  Identities=21%  Similarity=0.250  Sum_probs=204.1

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      |+||++|||||++|||+++|++|+++|++|++++|++++++++.+++       +.++++||++|+++++++++++.+  
T Consensus         3 L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~-------~~~~~~~Dv~~~~~v~~~~~~~~~--   73 (242)
T d1ulsa_           3 LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-------GAHPVVMDVADPASVERGFAEALA--   73 (242)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-------TCEEEECCTTCHHHHHHHHHHHHH--
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-------CCeEEEEecCCHHHHHHHHHHHHH--
Confidence            78999999999999999999999999999999999999888776654       457899999999999999999998  


Q ss_pred             hccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017812          137 LDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  214 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~  214 (365)
                          ++++||+||||||+..  +..+++.++|++++++|+.|+++++|+++|+|++++ .++|+++||. +.        
T Consensus        74 ----~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~~~i~~~ss~-~~--------  139 (242)
T d1ulsa_          74 ----HLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKN-PGSIVLTASR-VY--------  139 (242)
T ss_dssp             ----HHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-CEEEEEECCG-GG--------
T ss_pred             ----hcCCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccc-cceeeeeccc-cc--------
Confidence                5588999999999873  456889999999999999999999999999999876 6777777774 44        


Q ss_pred             CccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHh
Q 017812          215 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLL  294 (365)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  294 (365)
                                  .+.++..+|++||+|+++|+++|++|++   ++|||||+|+||+|+|++.+..++... .......|+
T Consensus       140 ------------~~~~~~~~Y~asKaal~~ltk~lA~ela---~~gIrVN~I~PG~v~T~~~~~~~~~~~-~~~~~~~pl  203 (242)
T d1ulsa_         140 ------------LGNLGQANYAASMAGVVGLTRTLALELG---RWGIRVNTLAPGFIETRMTAKVPEKVR-EKAIAATPL  203 (242)
T ss_dssp             ------------GCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCCTTTSSSCHHHH-HHHHHTCTT
T ss_pred             ------------cCCCCCcchHHHHHHHHHHHHHHHHHHh---hhCcEEEEEeeCcccChhhhcCCHHHH-HHHHhcCCC
Confidence                        5778889999999999999999999998   899999999999999999987765432 334445689


Q ss_pred             cCCCCHHHHHHHHHHHhcCCC---CCcccEEeCCCCccc
Q 017812          295 GLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRTV  330 (365)
Q Consensus       295 ~~~~~p~e~A~~i~~~~l~~~---~~~G~~~~~~~g~~~  330 (365)
                      +|+.+|+|+|+.++  ||+++   ..+|+.+.+|+|..+
T Consensus       204 ~R~~~pedia~~v~--fL~S~~s~~itG~~i~vDGG~t~  240 (242)
T d1ulsa_         204 GRAGKPLEVAYAAL--FLLSDESSFITGQVLFVDGGRTI  240 (242)
T ss_dssp             CSCBCHHHHHHHHH--HHHSGGGTTCCSCEEEESTTTTT
T ss_pred             CCCCCHHHHHHHHH--HHhchhhCCCCCcEEEECCCccC
Confidence            99999999999999  55554   468999999999764

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=100.00  E-value=8.8e-50  Score=355.16  Aligned_cols=240  Identities=21%  Similarity=0.226  Sum_probs=209.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      |++||++|||||++|||+++|++|+++|++|++++|++++++++.+++     +.++.++++|++|+++++++++++.+ 
T Consensus         2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~-   75 (254)
T d1hdca_           2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL-----GDAARYQHLDVTIEEDWQRVVAYARE-   75 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-----GGGEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----CCceEEEEcccCCHHHHHHHHHHHHH-
Confidence            689999999999999999999999999999999999999888877766     45789999999999999999999998 


Q ss_pred             HhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                           .+++||+||||||+..  +..+.+.++|++++++|+.|+++++++++|+|++++ .|+||++||.++.       
T Consensus        76 -----~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~-~G~II~isS~~~~-------  142 (254)
T d1hdca_          76 -----EFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAG-GGSIVNISSAAGL-------  142 (254)
T ss_dssp             -----HHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT-------
T ss_pred             -----HcCCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcC-CCeecccccchhc-------
Confidence                 5688999999999873  456889999999999999999999999999999876 7999999999998       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  293 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  293 (365)
                                   .+.++..+|++||+|+++|+++|+.|++   +.||+||+|+||+|+|+|..+...... .......|
T Consensus       143 -------------~~~~~~~~Y~asKaal~~lt~~lA~e~a---~~gIrVN~I~PG~v~T~~~~~~~~~~~-~~~~~~~p  205 (254)
T d1hdca_         143 -------------MGLALTSSYGASKWGVRGLSKLAAVELG---TDRIRVNSVHPGMTYTPMTAETGIRQG-EGNYPNTP  205 (254)
T ss_dssp             -------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCCHHHHHHTCCCS-TTSCTTST
T ss_pred             -------------ccccchhhHHHHHHHHHHHHHHHHHHhC---CCceEEEEeeeCcccCccchhcCHHHH-HHHHhCCC
Confidence                         8889999999999999999999999998   899999999999999998764322111 11122357


Q ss_pred             hcCCC-CHHHHHHHHHHHhcCCC---CCcccEEeCCCCccccCC
Q 017812          294 LGLLQ-SPEKGINSVLDAALAPP---ETSGVYFFGGKGRTVNSS  333 (365)
Q Consensus       294 ~~~~~-~p~e~A~~i~~~~l~~~---~~~G~~~~~~~g~~~~~~  333 (365)
                      ++|+. +|+|+|++++  ||.++   ..+|+.+.+|+|....|.
T Consensus       206 l~R~g~~PedvA~~v~--fL~S~~a~~itG~~i~vDGG~t~gp~  247 (254)
T d1hdca_         206 MGRVGNEPGEIAGAVV--KLLSDTSSYVTGAELAVDGGWTTGPT  247 (254)
T ss_dssp             TSSCB-CHHHHHHHHH--HHHSGGGTTCCSCEEEESTTTTTSCC
T ss_pred             CCCCCCCHHHHHHHHH--HHhchhhCCCCCceEEeCCCccCCCC
Confidence            88886 6999999999  55554   468999999999876543

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.6e-48  Score=346.14  Aligned_cols=234  Identities=24%  Similarity=0.264  Sum_probs=201.2

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      ++||++|||||++|||+++|++|+++|++|++++|+++..+ +.+++       ...++++|++|+++++++++++.+  
T Consensus         3 l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~-~~~~~-------~~~~~~~Dv~~~~~v~~~~~~~~~--   72 (248)
T d2d1ya1           3 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKE-VAEAI-------GGAFFQVDLEDERERVRFVEEAAY--   72 (248)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHH-HHHHH-------TCEEEECCTTCHHHHHHHHHHHHH--
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHc-------CCeEEEEeCCCHHHHHHHHHHHHH--
Confidence            78999999999999999999999999999999999987643 33333       245789999999999999999998  


Q ss_pred             hccCCCCCeeEEEecCCcc--cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017812          137 LDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  214 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~  214 (365)
                          .+++||+||||||+.  .+..+++.++|++++++|+.|+++++|+++|+|++++ .|+||++||.++.        
T Consensus        73 ----~~G~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~Ii~isS~~~~--------  139 (248)
T d2d1ya1          73 ----ALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVG-GGAIVNVASVQGL--------  139 (248)
T ss_dssp             ----HHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEECCGGGT--------
T ss_pred             ----hcCCCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccc-ccccccccccccc--------
Confidence                568999999999986  4566889999999999999999999999999999887 7999999999998        


Q ss_pred             CccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh-----HHHHHHHH
Q 017812          215 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS-----FLSLMAFT  289 (365)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~-----~~~~~~~~  289 (365)
                                  .+.++..+|++||+|+++|+++|++|++   +.||+||+|+||+|+|++.++...     ........
T Consensus       140 ------------~~~~~~~~Y~asKaal~~ltk~lA~el~---~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~  204 (248)
T d2d1ya1         140 ------------FAEQENAAYNASKGGLVNLTRSLALDLA---PLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWE  204 (248)
T ss_dssp             ------------SBCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCCHHHHHHHC--------CHHHH
T ss_pred             ------------ccccccchhHHHHHHHHHHHHHHHHHhh---hhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHH
Confidence                        8889999999999999999999999998   899999999999999998754311     11111223


Q ss_pred             HHHHhcCCCCHHHHHHHHHHHhcCCC---CCcccEEeCCCCccc
Q 017812          290 VLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRTV  330 (365)
Q Consensus       290 ~~~~~~~~~~p~e~A~~i~~~~l~~~---~~~G~~~~~~~g~~~  330 (365)
                      ...|++|+.+|+|+|+.++  ||+++   ..+|+.+.+|+|...
T Consensus       205 ~~~pl~R~~~pedia~~v~--fL~S~~s~~itG~~i~vDGG~ta  246 (248)
T d2d1ya1         205 DLHALRRLGKPEEVAEAVL--FLASEKASFITGAILPVDGGMTA  246 (248)
T ss_dssp             TTSTTSSCBCHHHHHHHHH--HHHSGGGTTCCSCEEEESTTGGG
T ss_pred             hcCCCCCCcCHHHHHHHHH--HHhCchhcCCCCcEEEcCcCccc
Confidence            3458899999999999999  55444   568999999998654

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=6.5e-48  Score=346.13  Aligned_cols=244  Identities=21%  Similarity=0.285  Sum_probs=201.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcC-CCceEEEEecCCChhhHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNK-DARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      .++||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.+. +.++.++++|++|+++++++++++.+
T Consensus         2 rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (264)
T d1spxa_           2 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   81 (264)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHH
Confidence            37899999999999999999999999999999999999999999999987743 45799999999999999999999998


Q ss_pred             HHhccCCCCCeeEEEecCCcccC------CCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc-ccc
Q 017812          135 WLLDSDMHSSIQLLINNAGILAT------SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT-HRN  207 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~~------~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~-~~~  207 (365)
                            .+++||+||||||+..+      ..+.+.++|++++++|+.|+++++++++|+|++++  |++|+++|.. +. 
T Consensus        82 ------~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~--g~iI~~~S~~~~~-  152 (264)
T d1spxa_          82 ------KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK--GEIVNISSIASGL-  152 (264)
T ss_dssp             ------HHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCTTSSS-
T ss_pred             ------HhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCcccccc--Ccceeeeeecccc-
Confidence                  56899999999998532      34568899999999999999999999999998865  6777777765 45 


Q ss_pred             cccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH-----
Q 017812          208 VFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF-----  282 (365)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~-----  282 (365)
                                         .+.+...+|++||+|+++|+++|++|++   +.||+||+|+||+|+|+|.+.....     
T Consensus       153 -------------------~~~~~~~~Y~asKaal~~lt~~lA~el~---~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~  210 (264)
T d1spxa_         153 -------------------HATPDFPYYSIAKAAIDQYTRNTAIDLI---QHGIRVNSISPGLVATGFGSAMGMPEETSK  210 (264)
T ss_dssp             -------------------SCCTTSHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEECCBCCCC------------
T ss_pred             -------------------ccCCCchhhhhhhhhHHHHHHHHHHHhc---ccCeEEEEEeeCCCCCcchhccCCcHHHHH
Confidence                               6788899999999999999999999998   8999999999999999997654211     


Q ss_pred             ---HHHHHHHHHHHhcCCCCHHHHHHHHHHHhcC--CCCCcccEEeCCCCccc
Q 017812          283 ---LSLMAFTVLKLLGLLQSPEKGINSVLDAALA--PPETSGVYFFGGKGRTV  330 (365)
Q Consensus       283 ---~~~~~~~~~~~~~~~~~p~e~A~~i~~~~l~--~~~~~G~~~~~~~g~~~  330 (365)
                         ..........|++|+.+|+|+|+++++++..  +...+|+.+.+|+|..+
T Consensus       211 ~~~~~~~~~~~~~Pl~R~g~pedvA~~v~fL~S~~~s~~itG~~i~vDGG~sl  263 (264)
T d1spxa_         211 KFYSTMATMKECVPAGVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSSL  263 (264)
T ss_dssp             --HHHHHHHHHHCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCcccCCccCceEEeCCChhh
Confidence               1112233446889999999999999954431  23579999999999754

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=1.7e-48  Score=343.76  Aligned_cols=227  Identities=21%  Similarity=0.264  Sum_probs=195.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+.             ..++..+++|++|+++++++++++.+ 
T Consensus         4 sl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~-------------~~~~~~~~~Dv~~~~~v~~~~~~~~~-   69 (237)
T d1uzma1           4 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGA-------------PKGLFGVEVDVTDSDAVDRAFTAVEE-   69 (237)
T ss_dssp             CCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCC-------------CTTSEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcch-------------hcCceEEEEecCCHHHHHHHHHHHHH-
Confidence            4789999999999999999999999999999999999764             23568899999999999999999998 


Q ss_pred             HhccCCCCCeeEEEecCCcc--cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                           .+++||+||||||+.  .+..+.+.++|++++++|+.+++++++.++|+|++++ .|+||++||.++.       
T Consensus        70 -----~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~g~Iv~isS~~~~-------  136 (237)
T d1uzma1          70 -----HQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNK-FGRMIFIGSVSGL-------  136 (237)
T ss_dssp             -----HHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCCC--------
T ss_pred             -----hcCCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccC-CCceEEEcchhhc-------
Confidence                 558899999999986  3456889999999999999999999999999999987 7899999999998       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  293 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  293 (365)
                                   .+.++..+|++||+|+++|+++|+.|++   ++||+||+|+||+|+|+|.+..++... .......|
T Consensus       137 -------------~~~~~~~~Y~asKaal~~lt~~lA~e~~---~~gIrVN~I~PG~v~T~~~~~~~~~~~-~~~~~~~p  199 (237)
T d1uzma1         137 -------------WGIGNQANYAASKAGVIGMARSIARELS---KANVTANVVAPGYIDTDMTRALDERIQ-QGALQFIP  199 (237)
T ss_dssp             -----------------CCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCCHHHHHSCHHHH-HHHGGGCT
T ss_pred             -------------cCCcccHHHHHHHHHHHHHHHHHHhhhh---cCCceeeeeeeCcCCChhhhccCHHHH-HHHHhcCC
Confidence                         7888999999999999999999999998   899999999999999999887654332 22334468


Q ss_pred             hcCCCCHHHHHHHHHHHhcCCC---CCcccEEeCCCCc
Q 017812          294 LGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGR  328 (365)
Q Consensus       294 ~~~~~~p~e~A~~i~~~~l~~~---~~~G~~~~~~~g~  328 (365)
                      ++|+.+|||+|+.+++  |+++   ..+|+.+.+|+|-
T Consensus       200 l~R~~~pedvA~~v~f--L~S~~s~~itG~~i~vdGG~  235 (237)
T d1uzma1         200 AKRVGTPAEVAGVVSF--LASEDASYISGAVIPVDGGM  235 (237)
T ss_dssp             TCSCBCHHHHHHHHHH--HHSGGGTTCCSCEEEESTTT
T ss_pred             CCCCcCHHHHHHHHHH--HhCchhcCCcCCeEEECCCC
Confidence            8999999999999994  4444   4689999999884

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=6e-48  Score=341.37  Aligned_cols=233  Identities=25%  Similarity=0.323  Sum_probs=202.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      |++||++|||||++|||+++|++|+++|++|++++|++++++++.+++      ..+..+.+|++|+++++++++     
T Consensus         2 dl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~------~~~~~~~~Dv~~~~~v~~~~~-----   70 (242)
T d1cyda_           2 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC------PGIEPVCVDLGDWDATEKALG-----   70 (242)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS------TTCEEEECCTTCHHHHHHHHT-----
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc------CCCeEEEEeCCCHHHHHHHHH-----
Confidence            588999999999999999999999999999999999999888877664      256789999999999877654     


Q ss_pred             HhccCCCCCeeEEEecCCcc--cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                           ++++||+||||||+.  .+..+++.++|++++++|+.|++++++.++|.|.+++..|+||++||.++.       
T Consensus        71 -----~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~-------  138 (242)
T d1cyda_          71 -----GIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAH-------  138 (242)
T ss_dssp             -----TCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGT-------
T ss_pred             -----HcCCCeEEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhcc-------
Confidence                 568999999999986  455688999999999999999999999999987655447999999999988       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh-HHHHHHHHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS-FLSLMAFTVLK  292 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~-~~~~~~~~~~~  292 (365)
                                   .+.++..+|++||+|+++|+++|++|++   +.||+||+|+||+|+|++.+.... ...........
T Consensus       139 -------------~~~~~~~~Y~asKaal~~lt~~lA~e~~---~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~  202 (242)
T d1cyda_         139 -------------VTFPNLITYSSTKGAMTMLTKAMAMELG---PHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERH  202 (242)
T ss_dssp             -------------SCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHS
T ss_pred             -------------ccCCccccccchHHHHHHHHHHHHHHhC---ccCeecccCCCCCccCHHHHhhcCCHHHHHHHHhcC
Confidence                         8889999999999999999999999998   899999999999999999875432 22233344556


Q ss_pred             HhcCCCCHHHHHHHHHHHhcCCC---CCcccEEeCCCCcc
Q 017812          293 LLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRT  329 (365)
Q Consensus       293 ~~~~~~~p~e~A~~i~~~~l~~~---~~~G~~~~~~~g~~  329 (365)
                      |++|+.+|||+|+.++  ||+++   ..+|+.+.+|+|..
T Consensus       203 pl~R~~~peeva~~v~--fL~S~~s~~itG~~i~vDGG~~  240 (242)
T d1cyda_         203 PLRKFAEVEDVVNSIL--FLLSDRSASTSGGGILVDAGYL  240 (242)
T ss_dssp             TTSSCBCHHHHHHHHH--HHHSGGGTTCCSSEEEESTTGG
T ss_pred             CCCCCcCHHHHHHHHH--HHhCchhcCcCCceEEeCcchh
Confidence            8999999999999999  45454   46899999999864

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=8.9e-48  Score=346.57  Aligned_cols=251  Identities=22%  Similarity=0.267  Sum_probs=209.6

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhc-CCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRN-KDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      ++||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.. .+.++.+++||++|+++++++++++.+ 
T Consensus         3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~-   81 (272)
T d1xkqa_           3 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK-   81 (272)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH-
T ss_pred             CCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHH-
Confidence            789999999999999999999999999999999999999999999998764 345799999999999999999999998 


Q ss_pred             HhccCCCCCeeEEEecCCcccCC------CCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCC-ccccc
Q 017812          136 LLDSDMHSSIQLLINNAGILATS------SRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSF-THRNV  208 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~~~------~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~-~~~~~  208 (365)
                           ++++||+||||||+..+.      .+.+.+.|++++++|+.|+++++++++|+|++++  |++|+++|. ++.  
T Consensus        82 -----~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~--g~iI~~~Ss~a~~--  152 (272)
T d1xkqa_          82 -----QFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK--GEIVNVSSIVAGP--  152 (272)
T ss_dssp             -----HHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCGGGSS--
T ss_pred             -----HhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccC--Cccccccchhccc--
Confidence                 568899999999986432      2456778999999999999999999999998764  666666664 556  


Q ss_pred             ccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHH----
Q 017812          209 FNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLS----  284 (365)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~----  284 (365)
                                        .+.++..+|++||+|+++|+++|+.|++   +.||+||+|+||+|+|+|.........    
T Consensus       153 ------------------~~~~~~~~Y~asKaal~~ltk~lA~el~---~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~  211 (272)
T d1xkqa_         153 ------------------QAQPDFLYYAIAKAALDQYTRSTAIDLA---KFGIRVNSVSPGMVETGFTNAMGMPDQASQK  211 (272)
T ss_dssp             ------------------SCCCSSHHHHHHHHHHHHHHHHHHHHHH---TTTCEEEEEEECCBCSSHHHHTTCCHHHHHH
T ss_pred             ------------------cCCCCcchhhhHHHHHHHHHHHHHHHhc---ccCeEEEEEeeCCCcchhhhccCCchHHHHH
Confidence                              7888999999999999999999999998   899999999999999999865421111    


Q ss_pred             HH----HHHHHHHhcCCCCHHHHHHHHHHHhcC--CCCCcccEEeCCCCccccCCcccCC
Q 017812          285 LM----AFTVLKLLGLLQSPEKGINSVLDAALA--PPETSGVYFFGGKGRTVNSSALSFN  338 (365)
Q Consensus       285 ~~----~~~~~~~~~~~~~p~e~A~~i~~~~l~--~~~~~G~~~~~~~g~~~~~~~~~~d  338 (365)
                      ..    ......|++|+.+|+|+|+.+++++..  +...+|+.+.+|+|..+-.....+|
T Consensus       212 ~~~~~~~~~~~~PlgR~g~pediA~~v~fL~S~~as~~iTG~~i~vDGG~~l~~g~~~~~  271 (272)
T d1xkqa_         212 FYNFMASHKECIPIGAAGKPEHIANIILFLADRNLSFYILGQSIVADGGTSLVMGTQAHD  271 (272)
T ss_dssp             HHHHHHHCTTTCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGCBGGGGSC
T ss_pred             HHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCcchhCCccCeEEEeCcCHHHhcCCCccC
Confidence            11    111224788999999999999944321  2346999999999988765444443

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=1.2e-47  Score=345.87  Aligned_cols=252  Identities=20%  Similarity=0.221  Sum_probs=213.9

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcC-CCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNK-DARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      ++||+++||||++|||+++|++|+++|++|++++|++++++++.+++.+.+. ..++.++++|++|+++++++++++.+ 
T Consensus         2 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~-   80 (274)
T d1xhla_           2 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA-   80 (274)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH-
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHH-
Confidence            6899999999999999999999999999999999999999999999988753 35789999999999999999999998 


Q ss_pred             HhccCCCCCeeEEEecCCcccC----CCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017812          136 LLDSDMHSSIQLLINNAGILAT----SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  211 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~~----~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~  211 (365)
                           .+++||+||||||+...    ..+.+.++|++++++|+.|+++++++++|+|++++ .|+|+++||.++.     
T Consensus        81 -----~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~g~ii~~ss~~~~-----  149 (274)
T d1xhla_          81 -----KFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGP-----  149 (274)
T ss_dssp             -----HHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSS-----
T ss_pred             -----HcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccc-cccccchhhhhcc-----
Confidence                 56899999999997522    23457899999999999999999999999999876 7889988888877     


Q ss_pred             cCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH----HHHHH
Q 017812          212 QVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF----LSLMA  287 (365)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~----~~~~~  287 (365)
                                     .+.+++.+|++||+|+++|+++|+.|++   +.||+||+|+||+|+|++.......    .....
T Consensus       150 ---------------~~~~~~~~Y~asKaal~~ltk~lA~ela---~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~  211 (274)
T d1xhla_         150 ---------------QAHSGYPYYACAKAALDQYTRCTAIDLI---QHGVRVNSVSPGAVATGFMGAMGLPETASDKLYS  211 (274)
T ss_dssp             ---------------SCCTTSHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHH
T ss_pred             ---------------ccCCCCceehhhhhHHHHHHHHHHHHHh---HhCCceeeeccCCCcCchhhhhcccchhhHHHHH
Confidence                           7888999999999999999999999998   8999999999999999987653211    11111


Q ss_pred             H----HHHHHhcCCCCHHHHHHHHHHHhcC--CCCCcccEEeCCCCccccCCcccCC
Q 017812          288 F----TVLKLLGLLQSPEKGINSVLDAALA--PPETSGVYFFGGKGRTVNSSALSFN  338 (365)
Q Consensus       288 ~----~~~~~~~~~~~p~e~A~~i~~~~l~--~~~~~G~~~~~~~g~~~~~~~~~~d  338 (365)
                      .    ....|++|+.+|+|+|+.+++++..  +...+|+.+.+|+|..+-.....+|
T Consensus       212 ~~~~~~~~iPlgR~g~pediA~~v~fL~S~d~s~~itG~~i~vDGG~~l~~g~~~~~  268 (274)
T d1xhla_         212 FIGSRKECIPVGHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGSTLVMGMQTHD  268 (274)
T ss_dssp             HHHHCTTTCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGCCGGGGSC
T ss_pred             HHHHHHcCCCCCCCcCHHHHHHHHHHHcCCccccCccCcEEEeCcCHHHhcCCCccc
Confidence            1    1224889999999999999954431  2357999999999988765544444

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=100.00  E-value=1.6e-47  Score=344.38  Aligned_cols=241  Identities=22%  Similarity=0.299  Sum_probs=206.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      .|+||+||||||++|||+++|++|+++|++|++++|++++++++.+++...   ..+.+++||++|+++++++++++.+ 
T Consensus         3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~-   78 (268)
T d2bgka1           3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSP---DVISFVHCDVTKDEDVRNLVDTTIA-   78 (268)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT---TTEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCC---CceEEEEccCCCHHHHHHHHHHHHH-
Confidence            388999999999999999999999999999999999999999999998543   4678899999999999999999998 


Q ss_pred             HhccCCCCCeeEEEecCCcccC----CCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc
Q 017812          136 LLDSDMHSSIQLLINNAGILAT----SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA  211 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~~----~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~  211 (365)
                           .++++|+||||||+...    ..+.+.++|++++++|+.|+++++|+++|+|.+++ .|+||++||.++.     
T Consensus        79 -----~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~g~ii~iss~~~~-----  147 (268)
T d2bgka1          79 -----KHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAK-KGSIVFTASISSF-----  147 (268)
T ss_dssp             -----HHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGT-CEEEEEECCGGGT-----
T ss_pred             -----HcCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcC-CCCcccccccccc-----
Confidence                 56899999999998632    35778999999999999999999999999999876 7999999999987     


Q ss_pred             cCCCccccccccccCCCCCh-hhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh----HHHHH
Q 017812          212 QVNNETITGKFFLRSKCYPC-ARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS----FLSLM  286 (365)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~-~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~----~~~~~  286 (365)
                                     .+.++ ...|++||+|+++|+++|+.|++   +.||+||+|+||+|+|+|..+...    .....
T Consensus       148 ---------------~~~~~~~~~Y~asKaal~~lt~~lA~el~---~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~  209 (268)
T d2bgka1         148 ---------------TAGEGVSHVYTATKHAVLGLTTSLCTELG---EYGIRVNCVSPYIVASPLLTDVFGVDSSRVEEL  209 (268)
T ss_dssp             ---------------CCCTTSCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHH
T ss_pred             ---------------ccccccccccchhHHHHHhCHHHHHHHhC---hhCeEEEecCCCCccChHHhhhhcCCHHHHHHH
Confidence                           44444 45899999999999999999998   899999999999999999876422    11111


Q ss_pred             HHHHHHHhcCCCCHHHHHHHHHHHhcCCC---CCcccEEeCCCCcccc
Q 017812          287 AFTVLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRTVN  331 (365)
Q Consensus       287 ~~~~~~~~~~~~~p~e~A~~i~~~~l~~~---~~~G~~~~~~~g~~~~  331 (365)
                      ......|++|+.+|||+|++++  ||+++   ..+|+.+.+|+|....
T Consensus       210 ~~~~~~~~gr~~~pedvA~~v~--fL~S~~s~~itGq~i~VDGG~t~~  255 (268)
T d2bgka1         210 AHQAANLKGTLLRAEDVADAVA--YLAGDESKYVSGLNLVIDGGYTRT  255 (268)
T ss_dssp             HHHTCSSCSCCCCHHHHHHHHH--HHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHhccccCCCCcCHHHHHHHHH--HHhChhhCCccCceEEECcCcccC
Confidence            1222236679999999999999  44454   5689999999997653

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=100.00  E-value=2.1e-47  Score=341.04  Aligned_cols=242  Identities=23%  Similarity=0.337  Sum_probs=208.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      +|+||+||||||++|||+++|++|+++|++|++++|++++++++.+++.+.  +..++++.+|+++.++++++++++.+.
T Consensus         3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~~~~~   80 (258)
T d1ae1a_           3 SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK--GLNVEGSVCDLLSRTERDKLMQTVAHV   80 (258)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCCceEEEeecCCHHHHHHHHHHHHHH
Confidence            689999999999999999999999999999999999999999999999776  467889999999999999999999984


Q ss_pred             HhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                      +     .+++|+||||||+..  +..+++.++|++++++|+.++++++++++|.|.+++ .|+||++||.++.       
T Consensus        81 ~-----~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~-~g~ii~isS~~~~-------  147 (258)
T d1ae1a_          81 F-----DGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQ-NGNVIFLSSIAGF-------  147 (258)
T ss_dssp             T-----TSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-SEEEEEECCGGGT-------
T ss_pred             h-----CCCcEEEeccccccccCccccCCHHHHhhhhhhcccccccccccccccccccc-ccccccccccccc-------
Confidence            2     268999999999873  456789999999999999999999999999999887 8999999999998       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH-----HHHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF-----LSLMAF  288 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~-----~~~~~~  288 (365)
                                   .+.++..+|+++|+|+++|++.|++|++   +.||+||+|+||+++|+|.+.....     ......
T Consensus       148 -------------~~~~~~~~Y~~sK~al~~lt~~lA~el~---~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~  211 (258)
T d1ae1a_         148 -------------SALPSVSLYSASKGAINQMTKSLACEWA---KDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNF  211 (258)
T ss_dssp             -------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBC-------------CHHHHHHH
T ss_pred             -------------cccccchhHHHHHHHHHHHHHHHHHhcC---cCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHH
Confidence                         8889999999999999999999999998   8999999999999999998654221     222334


Q ss_pred             HHHHHhcCCCCHHHHHHHHHHHhcCCC---CCcccEEeCCCCccc
Q 017812          289 TVLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRTV  330 (365)
Q Consensus       289 ~~~~~~~~~~~p~e~A~~i~~~~l~~~---~~~G~~~~~~~g~~~  330 (365)
                      ....|++|+.+|+|+|+++++  |+++   ..+|+.+.+|+|...
T Consensus       212 ~~~~plgR~~~pediA~~v~f--L~S~~s~~itG~~i~vDGG~s~  254 (258)
T d1ae1a_         212 IVKTPMGRAGKPQEVSALIAF--LCFPAASYITGQIIWADGGFTA  254 (258)
T ss_dssp             HHHSTTCSCBCHHHHHHHHHH--HHSGGGTTCCSCEEEESTTGGG
T ss_pred             HhcCCCCCCcCHHHHHHHHHH--HhChhhCCCcCcEEEeCCCeec
Confidence            445689999999999999994  4454   468999999998654

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=100.00  E-value=1.3e-47  Score=343.30  Aligned_cols=249  Identities=21%  Similarity=0.239  Sum_probs=212.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      +++||+||||||++|||+++|++|+++|++|++++|+.++++++.+++.+.. +.++.++++|++|+++++++++++.+ 
T Consensus         6 ~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~-g~~~~~~~~Dv~~~~~v~~~~~~~~~-   83 (260)
T d1h5qa_           6 SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEF-GVKTKAYQCDVSNTDIVTKTIQQIDA-   83 (260)
T ss_dssp             CCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHH-TCCEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHh-CCceEEEEccCCCHHHHHHHHHHHHH-
Confidence            6899999999999999999999999999999999999999999998887665 45789999999999999999999998 


Q ss_pred             HhccCCCCCeeEEEecCCcc--cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                           .+++||+||||||+.  .+..+.+.++|++++++|+.|+++++++++|+|.+++..|+|++++|...........
T Consensus        84 -----~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~  158 (260)
T d1h5qa_          84 -----DLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSL  158 (260)
T ss_dssp             -----HSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEET
T ss_pred             -----HhCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeecccccccccccc
Confidence                 679999999999986  3456889999999999999999999999999997655578888888877652211100


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  293 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  293 (365)
                                   .+.++..+|++||+|+++|+++|++|++   +.||+||+|+||+|+|++....++... .......|
T Consensus       159 -------------~~~~~~~~Y~asKaal~~lt~~lA~el~---~~gIrvN~I~PG~i~T~~~~~~~~~~~-~~~~~~~p  221 (260)
T d1h5qa_         159 -------------NGSLTQVFYNSSKAACSNLVKGLAAEWA---SAGIRVNALSPGYVNTDQTAHMDKKIR-DHQASNIP  221 (260)
T ss_dssp             -------------TEECSCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCCGGGGGSCHHHH-HHHHHTCT
T ss_pred             -------------ccCccccchhhhhhhHHHHHHHHHHHhc---hhCeEEeecCCCcccCcchhccCHHHH-HHHHhcCC
Confidence                         2345678999999999999999999998   899999999999999999887654332 23344568


Q ss_pred             hcCCCCHHHHHHHHHHHhcCCC---CCcccEEeCCCCccc
Q 017812          294 LGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRTV  330 (365)
Q Consensus       294 ~~~~~~p~e~A~~i~~~~l~~~---~~~G~~~~~~~g~~~  330 (365)
                      ++|+.+|||+|+.++  ||+++   ..+|+.+.+|+|..+
T Consensus       222 l~R~g~pedvA~~v~--fL~S~~s~~itG~~i~VDGG~~~  259 (260)
T d1h5qa_         222 LNRFAQPEEMTGQAI--LLLSDHATYMTGGEYFIDGGQLI  259 (260)
T ss_dssp             TSSCBCGGGGHHHHH--HHHSGGGTTCCSCEEEECTTGGG
T ss_pred             CCCCcCHHHHHHHHH--HHhcchhCCCcCceEEECCCeec
Confidence            899999999999999  55555   458999999999754

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=1.9e-48  Score=346.85  Aligned_cols=237  Identities=21%  Similarity=0.204  Sum_probs=204.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      .|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++     +.+..++++|++|+++++++++++.+ 
T Consensus         3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~~~~~~~~~~~-   76 (253)
T d1hxha_           3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL-----GERSMFVRHDVSSEADWTLVMAAVQR-   76 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-----CTTEEEECCCTTCHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----CCCeEEEEeecCCHHHHHHHHHHHHH-
Confidence            378999999999999999999999999999999999999999988887     55788999999999999999999998 


Q ss_pred             HhccCCCCCeeEEEecCCcc--cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                           .++++|+||||||+.  .+..+.+.++|++++++|+.|+++++++++|+|+++  .|+||++||.++.       
T Consensus        77 -----~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~--~G~Iv~isS~~~~-------  142 (253)
T d1hxha_          77 -----RLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKET--GGSIINMASVSSW-------  142 (253)
T ss_dssp             -----HHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT--CEEEEEECCGGGT-------
T ss_pred             -----HhCCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhc--CCceecccchhhh-------
Confidence                 568999999999987  445688999999999999999999999999999865  4999999999998       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc-hhH---HHHHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV-PSF---LSLMAFT  289 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~-~~~---~~~~~~~  289 (365)
                                   .+.++..+|++||+|+.+|++++++|++.. ..|||||+|+||+|+|++.+.. +..   .......
T Consensus       143 -------------~~~~~~~~Y~asKaal~~lt~~lA~e~~~~-g~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~  208 (253)
T d1hxha_         143 -------------LPIEQYAGYSASKAAVSALTRAAALSCRKQ-GYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDP  208 (253)
T ss_dssp             -------------SCCTTBHHHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBT
T ss_pred             -------------cCccccccccchhHHHHHHHHHHHHHHhhc-CCCEEEEEEeECCCcCHhHHhhCcchhhHHHHHhCc
Confidence                         888999999999999999999999999710 2569999999999999987542 111   1111112


Q ss_pred             HHHHhcCCCCHHHHHHHHHHHhcCCC---CCcccEEeCCCCc
Q 017812          290 VLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGR  328 (365)
Q Consensus       290 ~~~~~~~~~~p~e~A~~i~~~~l~~~---~~~G~~~~~~~g~  328 (365)
                      ...|++|+.+|||+|++++  ||+++   ..+|+.+.+|+|-
T Consensus       209 ~~~~~gr~~~pedvA~~v~--fL~S~~s~~itG~~i~VDGG~  248 (253)
T d1hxha_         209 KLNRAGRAYMPERIAQLVL--FLASDESSVMSGSELHADNSI  248 (253)
T ss_dssp             TTBTTCCEECHHHHHHHHH--HHHSGGGTTCCSCEEEESSSC
T ss_pred             cccccCCCCCHHHHHHHHH--HHhChhhCCCcCcEEEECccH
Confidence            2346778899999999999  55554   4689999999884

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-47  Score=340.38  Aligned_cols=240  Identities=20%  Similarity=0.193  Sum_probs=210.6

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      ++||+||||||++|||+++|++|+++|++|++++|+.++++++.+++.+..++.++.++++|++|+++++++++++.+  
T Consensus         1 i~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~--   78 (254)
T d2gdza1           1 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVD--   78 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHH--
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHH--
Confidence            369999999999999999999999999999999999999999999998887778999999999999999999999998  


Q ss_pred             hccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCC--CCCeEEEEcCCcccccccccCC
Q 017812          137 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP--VPSRIVNVTSFTHRNVFNAQVN  214 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~--~~g~iV~vsS~~~~~~~~~~~~  214 (365)
                          ++++||+||||||+..      .++|++++++|+.+++++++.++|+|.+++  ..|+||++||.++.        
T Consensus        79 ----~~G~iDilVnnAg~~~------~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~--------  140 (254)
T d2gdza1          79 ----HFGRLDILVNNAGVNN------EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGL--------  140 (254)
T ss_dssp             ----HHSCCCEEEECCCCCC------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGT--------
T ss_pred             ----HcCCcCeecccccccc------cccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhc--------
Confidence                5688999999999853      346899999999999999999999998764  25899999999998        


Q ss_pred             CccccccccccCCCCChhhhhhhhHHHHHHHHHH--HHHHhCCCCCCCeEEEEecCCcccCCccccchhHH-------HH
Q 017812          215 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYE--LHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFL-------SL  285 (365)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~--la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~-------~~  285 (365)
                                  .+.++..+|++||+|+.+|+++  |+.|++   ++||+||+|+||+|+|+|.+......       ..
T Consensus       141 ------------~~~~~~~~Y~asKaal~~ltrs~ala~e~~---~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~  205 (254)
T d2gdza1         141 ------------MPVAQQPVYCASKHGIVGFTRSAALAANLM---NSGVRLNAICPGFVNTAILESIEKEENMGQYIEYK  205 (254)
T ss_dssp             ------------SCCTTCHHHHHHHHHHHHHHHHHHHHHHHH---TCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGH
T ss_pred             ------------cCCCCccchHHHHHHHHHHHHHHHHHHHhc---CCCEEEEEEEcCCCCChhhhhccccccccccHHHH
Confidence                        8899999999999999999996  788998   89999999999999999987643221       12


Q ss_pred             HHHHHHHHhcCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccccC
Q 017812          286 MAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNS  332 (365)
Q Consensus       286 ~~~~~~~~~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~~~  332 (365)
                      .......|++|+.+|+|+|+++++++. ++..+|+.+.+|+|+.+..
T Consensus       206 ~~~~~~~p~~r~~~pedvA~~v~fL~s-~~~itG~~i~VdGG~~~~~  251 (254)
T d2gdza1         206 DHIKDMIKYYGILDPPLIANGLITLIE-DDALNGAIMKITTSKGIHF  251 (254)
T ss_dssp             HHHHHHHHHHCCBCHHHHHHHHHHHHH-CTTCSSCEEEEETTTEEEE
T ss_pred             HHHHhcCCCCCCcCHHHHHHHHHHHHc-CCCCCCCEEEECCCCeeec
Confidence            234455688999999999999996553 3457999999999987653

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.1e-47  Score=346.51  Aligned_cols=265  Identities=19%  Similarity=0.213  Sum_probs=222.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcC---CCceEEEEecCCChhhHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNK---DARLEAFQVDLSSFQSVLKFKDSL  132 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~---~~~~~~~~~Dls~~~~v~~~~~~~  132 (365)
                      .|+||+||||||++|||+++|++|+++|++|++++|+.++++++.+++.+..+   +.++..++||++|+++++++++++
T Consensus         9 ~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~   88 (297)
T d1yxma1           9 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST   88 (297)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHH
Confidence            48999999999999999999999999999999999999999999999986532   568999999999999999999999


Q ss_pred             HHHHhccCCCCCeeEEEecCCcc--cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc
Q 017812          133 QQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN  210 (365)
Q Consensus       133 ~~~~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~  210 (365)
                      .+      .+++||+||||||+.  .+..+.+.++|++++++|+.|+++++++++|+|.+++ .|+||++||.. .    
T Consensus        89 ~~------~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~g~Ii~~ss~~-~----  156 (297)
T d1yxma1          89 LD------TFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEH-GGSIVNIIVPT-K----  156 (297)
T ss_dssp             HH------HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-CEEEEEECCCC-T----
T ss_pred             HH------HhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccc-ccccccccccc-c----
Confidence            98      558899999999986  4566889999999999999999999999999999887 78899887643 3    


Q ss_pred             ccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH---HHHHH
Q 017812          211 AQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF---LSLMA  287 (365)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~---~~~~~  287 (365)
                                      .+.++...|++||+|+++|+++++.|++   +.||+||+|+||+|+|++.......   .....
T Consensus       157 ----------------~~~~~~~~Y~asKaal~~ltk~lA~el~---~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~  217 (297)
T d1yxma1         157 ----------------AGFPLAVHSGAARAGVYNLTKSLALEWA---CSGIRINCVAPGVIYSQTAVENYGSWGQSFFEG  217 (297)
T ss_dssp             ----------------TCCTTCHHHHHHHHHHHHHHHHHHHHTG---GGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTT
T ss_pred             ----------------ccccccccchhHHHHHHHHHHHHHHHhc---ccCceEEEeeeCcCcCcchhhhccccCHHHHHH
Confidence                            5678889999999999999999999998   8999999999999999987543211   11112


Q ss_pred             HHHHHHhcCCCCHHHHHHHHHHHhcCCC---CCcccEEeCCCCcccc-----------CCcccCCHHHHHHHHHHHHHhh
Q 017812          288 FTVLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRTVN-----------SSALSFNSKLAGELWTTSCNLF  353 (365)
Q Consensus       288 ~~~~~~~~~~~~p~e~A~~i~~~~l~~~---~~~G~~~~~~~g~~~~-----------~~~~~~d~~~~~~lw~~~~~~~  353 (365)
                      .....|++|+.+|+|+|+.++  ||+++   ..+|+.+.+|+|..+-           ......+.+..+++|+..++..
T Consensus       218 ~~~~~plgR~g~pedvA~~v~--fL~Sd~s~~iTG~~i~VDGG~sl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (297)
T d1yxma1         218 SFQKIPAKRIGVPEEVSSVVC--FLLSPAASFITGQSVDVDGGRSLYTHSYEVPDHDNWPKGAGDLSVVKKMKETFKEKA  295 (297)
T ss_dssp             GGGGSTTSSCBCTHHHHHHHH--HHHSGGGTTCCSCEEEESTTGGGCBTTCCCCCCSCCCCCSSCCHHHHHHHHHHHHHH
T ss_pred             HHhcCCCCCCcCHHHHHHHHH--HHhCchhcCcCCcEEEeCcChhhhcCCCCCCCcccccccCCchHHHHHHhHhhHHhc
Confidence            223358899999999999999  55554   4689999999997652           1223345677788888877654

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-47  Score=338.09  Aligned_cols=233  Identities=24%  Similarity=0.275  Sum_probs=201.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      .|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++      ..+..+.+|++|+++++++++     
T Consensus         4 ~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~------~~~~~~~~Dv~d~~~v~~~~~-----   72 (244)
T d1pr9a_           4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC------PGIEPVCVDLGDWEATERALG-----   72 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS------TTCEEEECCTTCHHHHHHHHT-----
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhc------CCCeEEEEeCCCHHHHHHHHH-----
Confidence            479999999999999999999999999999999999999988877765      246789999999999877664     


Q ss_pred             HhccCCCCCeeEEEecCCcc--cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                           ++++||+||||||+.  .+..+.+.++|++++++|+.++++++++++|.|.+++..|+||++||.++.       
T Consensus        73 -----~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~-------  140 (244)
T d1pr9a_          73 -----SVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQ-------  140 (244)
T ss_dssp             -----TCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGT-------
T ss_pred             -----HhCCceEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeeccccccc-------
Confidence                 568999999999986  345688999999999999999999999999976554447999999999998       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh-HHHHHHHHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS-FLSLMAFTVLK  292 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~-~~~~~~~~~~~  292 (365)
                                   .+.++..+|++||+|+++|+++|+.|++   +.|||||+|+||+|+|++.+.... ...........
T Consensus       141 -------------~~~~~~~~Y~asKaal~~lt~~lA~el~---~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~  204 (244)
T d1pr9a_         141 -------------RAVTNHSVYCSTKGALDMLTKVMALELG---PHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRI  204 (244)
T ss_dssp             -------------SCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECCBCSHHHHTTSCSHHHHHHHHTTC
T ss_pred             -------------ccccchhhhhhhHHHHHHHHHHHHHHhC---CCcEEEEEEeeCcCcChHHhhhccChHHHHHHHhcC
Confidence                         8889999999999999999999999998   889999999999999999876432 22233334446


Q ss_pred             HhcCCCCHHHHHHHHHHHhcCCC---CCcccEEeCCCCcc
Q 017812          293 LLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRT  329 (365)
Q Consensus       293 ~~~~~~~p~e~A~~i~~~~l~~~---~~~G~~~~~~~g~~  329 (365)
                      |++|+.+|||+|+.++  ||.++   ..+|+.+.+|+|..
T Consensus       205 pl~R~~~peevA~~v~--fL~S~~a~~itG~~i~vDGG~~  242 (244)
T d1pr9a_         205 PLGKFAEVEHVVNAIL--FLLSDRSGMTTGSTLPVEGGFW  242 (244)
T ss_dssp             TTCSCBCHHHHHHHHH--HHHSGGGTTCCSCEEEESTTGG
T ss_pred             CCCCCcCHHHHHHHHH--HHhCchhCCcCCcEEEECccHh
Confidence            8899999999999999  55554   56899999999853

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=100.00  E-value=8e-47  Score=333.73  Aligned_cols=213  Identities=28%  Similarity=0.396  Sum_probs=194.0

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCCE-------EEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHH
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGFH-------VVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  132 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~~-------Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~  132 (365)
                      ++|||||||+|||+++|++|+++|++       |++++|++++++++.+++++.  +.++.+++||++|+++++++++++
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~--g~~~~~~~~Dvt~~~~v~~~~~~~   79 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE--GALTDTITADISDMADVRRLTTHI   79 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTT--TCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHH
Confidence            57999999999999999999999997       999999999999999999876  568899999999999999999999


Q ss_pred             HHHHhccCCCCCeeEEEecCCcc--cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccc
Q 017812          133 QQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFN  210 (365)
Q Consensus       133 ~~~~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~  210 (365)
                      .+      +++++|+||||||+.  .+..+.+.++|+++|++|+.|+++++++++|+|++++ .|+||++||.++.    
T Consensus        80 ~~------~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~----  148 (240)
T d2bd0a1          80 VE------RYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQH-SGHIFFITSVAAT----  148 (240)
T ss_dssp             HH------HTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT----
T ss_pred             HH------HcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcC-CCceEEEechhhc----
Confidence            98      678999999999987  4556889999999999999999999999999999876 7999999999998    


Q ss_pred             ccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHH
Q 017812          211 AQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTV  290 (365)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~  290 (365)
                                      .+.+++++|++||+|+.+|+++|+.|++   +.||+||+|+||+|+|+|....+...       
T Consensus       149 ----------------~~~~~~~~Y~asK~al~~lt~~la~el~---~~gIrvn~i~PG~v~T~~~~~~~~~~-------  202 (240)
T d2bd0a1         149 ----------------KAFRHSSIYCMSKFGQRGLVETMRLYAR---KCNVRITDVQPGAVYTPMWGKVDDEM-------  202 (240)
T ss_dssp             ----------------SCCTTCHHHHHHHHHHHHHHHHHHHHHT---TTTEEEEEEEECCBCSTTTCCCCSTT-------
T ss_pred             ----------------CCCCCChHHHHHHHHHHHHHHHHHHHhC---cCCeEEEEeeeCcccCchhhhcCHhh-------
Confidence                            8889999999999999999999999998   89999999999999999988765432       


Q ss_pred             HHHhcCCCCHHHHHHHHHHHhcCC
Q 017812          291 LKLLGLLQSPEKGINSVLDAALAP  314 (365)
Q Consensus       291 ~~~~~~~~~p~e~A~~i~~~~l~~  314 (365)
                         ..++.+|||+|+.+++++..+
T Consensus       203 ---~~~~~~PedvA~~v~~l~s~~  223 (240)
T d2bd0a1         203 ---QALMMMPEDIAAPVVQAYLQP  223 (240)
T ss_dssp             ---GGGSBCHHHHHHHHHHHHTSC
T ss_pred             ---HhcCCCHHHHHHHHHHHHcCC
Confidence               135679999999999766544

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-46  Score=332.73  Aligned_cols=221  Identities=23%  Similarity=0.335  Sum_probs=198.0

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      +++.||++||||||+|||+++|++|+++|++|++++|++++++++.+++.+.  +.+++++.||++|+++++++++++.+
T Consensus         3 ~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~--~~~~~~~~~Dvs~~~~v~~~~~~i~~   80 (244)
T d1yb1a_           3 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL--GAKVHTFVVDCSNREDIYSSAKKVKA   80 (244)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHHH
Confidence            5689999999999999999999999999999999999999999999999876  56899999999999999999999998


Q ss_pred             HHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017812          135 WLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~  212 (365)
                            .++++|+||||||+..  +..+.+.+.+++++++|+.|+++++++++|+|++++ .|+||++||.++.      
T Consensus        81 ------~~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~G~Iv~isS~~~~------  147 (244)
T d1yb1a_          81 ------EIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNN-HGHIVTVASAAGH------  147 (244)
T ss_dssp             ------HTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCC-C------
T ss_pred             ------HcCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcC-CceEEEeecchhc------
Confidence                  5789999999999874  445678899999999999999999999999999887 7999999999998      


Q ss_pred             CCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHH
Q 017812          213 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLK  292 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~  292 (365)
                                    .+.+++++|++||+|+.+|+++|+.|++..+..||+|++|+||+|+|++.+...           .
T Consensus       148 --------------~~~~~~~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~~~-----------~  202 (244)
T d1yb1a_         148 --------------VSVPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNPS-----------T  202 (244)
T ss_dssp             --------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCTH-----------H
T ss_pred             --------------CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhCcC-----------c
Confidence                          889999999999999999999999998632247999999999999999987632           2


Q ss_pred             HhcCCCCHHHHHHHHHHHhcCCC
Q 017812          293 LLGLLQSPEKGINSVLDAALAPP  315 (365)
Q Consensus       293 ~~~~~~~p~e~A~~i~~~~l~~~  315 (365)
                      +..+..+||++|+.+++.+....
T Consensus       203 ~~~~~~~pe~va~~i~~~~~~~~  225 (244)
T d1yb1a_         203 SLGPTLEPEEVVNRLMHGILTEQ  225 (244)
T ss_dssp             HHCCCCCHHHHHHHHHHHHHTTC
T ss_pred             cccCCCCHHHHHHHHHHHHhcCC
Confidence            34467799999999998776654

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.4e-46  Score=333.20  Aligned_cols=244  Identities=23%  Similarity=0.312  Sum_probs=206.2

Q ss_pred             CCCCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHH
Q 017812           52 PPITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDS  131 (365)
Q Consensus        52 ~~~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~  131 (365)
                      |.|.+++||+||||||++|||+++|++|+++|++|++++|++++++++.+++++.+++.++++++||+++++++++++++
T Consensus         3 ~~M~~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~   82 (257)
T d1xg5a_           3 PGMERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSA   82 (257)
T ss_dssp             TTCGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHH
Confidence            45667999999999999999999999999999999999999999999999999987778999999999999999999999


Q ss_pred             HHHHHhccCCCCCeeEEEecCCcc--cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCC-CCCeEEEEcCCccccc
Q 017812          132 LQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP-VPSRIVNVTSFTHRNV  208 (365)
Q Consensus       132 ~~~~~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~-~~g~iV~vsS~~~~~~  208 (365)
                      +.+      ++++||+||||||..  .+..+.+.++|++.+++|+.|+++++++++|.|++++ .+|+||++||.++...
T Consensus        83 ~~~------~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~  156 (257)
T d1xg5a_          83 IRS------QHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRV  156 (257)
T ss_dssp             HHH------HHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSC
T ss_pred             HHH------hcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCC
Confidence            999      568899999999986  4566889999999999999999999999999998754 3689999999988611


Q ss_pred             ccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHh--CCCCCCCeEEEEecCCcccCCccccchhHHHHH
Q 017812          209 FNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNL--GLDKSRHVSVIAADPGVVKTNIMREVPSFLSLM  286 (365)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~--~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~  286 (365)
                                        .|.+....|++||+|+.+|+++|+.|+  +   ++||+||+|+||+++|++......... .
T Consensus       157 ------------------~p~~~~~~Y~~sKaal~~ltr~la~el~~~---~~~I~vn~i~PG~i~t~~~~~~~~~~~-~  214 (257)
T d1xg5a_         157 ------------------LPLSVTHFYSATKYAVTALTEGLRQELREA---QTHIRATCISPGVVETQFAFKLHDKDP-E  214 (257)
T ss_dssp             ------------------CSCGGGHHHHHHHHHHHHHHHHHHHHHHHT---TCCCEEEEEEESCBCSSHHHHHTTTCH-H
T ss_pred             ------------------CCCcccHHHHHHHHHHHhCHHHHHHHHHhC---CCCEEEEEEeCCCCCChhhhhcChhhH-H
Confidence                              356677889999999999999999998  5   789999999999999999765543222 2


Q ss_pred             HHHHHHHhcCCCCHHHHHHHHHHHhcCCC-CCcccEEe
Q 017812          287 AFTVLKLLGLLQSPEKGINSVLDAALAPP-ETSGVYFF  323 (365)
Q Consensus       287 ~~~~~~~~~~~~~p~e~A~~i~~~~l~~~-~~~G~~~~  323 (365)
                      ......|++|+.+|||+|+++++++..+. ..+|+.+.
T Consensus       215 ~~~~~~~~~r~~~pedvA~~v~fL~s~~a~~itG~i~i  252 (257)
T d1xg5a_         215 KAAATYEQMKCLKPEDVAEAVIYVLSTPAHIQIGDIQM  252 (257)
T ss_dssp             HHHHHHC---CBCHHHHHHHHHHHHHSCTTEEEEEEEE
T ss_pred             HHHhcCCCCCCcCHHHHHHHHHHHhCChhcCeECCEEE
Confidence            23344677899999999999995443221 34676544

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=100.00  E-value=3.9e-46  Score=336.40  Aligned_cols=238  Identities=20%  Similarity=0.196  Sum_probs=202.4

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      |+||+||||||++|||+++|++|+++|++|++++|++++++++.+++     +.++..+.+|++++++++++++++.+  
T Consensus         3 L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~-----~~~~~~~~~Dv~~~~~~~~~~~~~~~--   75 (276)
T d1bdba_           3 LKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDH-----GDNVLGIVGDVRSLEDQKQAASRCVA--   75 (276)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----GGGEEEEECCTTCHHHHHHHHHHHHH--
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----CCCeeEEecccccHHHHHHHHHHHHH--
Confidence            78999999999999999999999999999999999999988877776     45789999999999999999999998  


Q ss_pred             hccCCCCCeeEEEecCCcccCC-------CCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccc
Q 017812          137 LDSDMHSSIQLLINNAGILATS-------SRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVF  209 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~~~-------~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~  209 (365)
                          .++++|++|||||+..+.       .+.+.+.|+++|++|+.|+++++|+++|+|++++  |+||+++|.++.   
T Consensus        76 ----~~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~--g~iI~i~S~~~~---  146 (276)
T d1bdba_          76 ----RFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR--GNVIFTISNAGF---  146 (276)
T ss_dssp             ----HHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCGGGT---
T ss_pred             ----HhCCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC--CCceeeeechhc---
Confidence                568899999999986322       2344567999999999999999999999998765  899999999988   


Q ss_pred             cccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH-------
Q 017812          210 NAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF-------  282 (365)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~-------  282 (365)
                                       .+.++..+|++||+|+++|+++|+.|++   + +|+||+|+||+|+|+|.......       
T Consensus       147 -----------------~~~~~~~~Y~asKaal~~ltr~lA~ela---~-~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~  205 (276)
T d1bdba_         147 -----------------YPNGGGPLYTAAKHAIVGLVRELAFELA---P-YVRVNGVGSGGINSDLRGPSSLGMGSKAIS  205 (276)
T ss_dssp             -----------------STTSSCHHHHHHHHHHHHHHHHHHHHHT---T-TCEEEEEEECCCCSCCCCCGGGC-------
T ss_pred             -----------------cCCCCCchHHHHHHHHHHHHHHHHHHhh---c-ceEEcccCCCCEecCcCCccchhhhhhccC
Confidence                             7888999999999999999999999997   4 59999999999999987543211       


Q ss_pred             --HHHHHHHHHHHhcCCCCHHHHHHHHHHHhcC--CCCCcccEEeCCCCcccc
Q 017812          283 --LSLMAFTVLKLLGLLQSPEKGINSVLDAALA--PPETSGVYFFGGKGRTVN  331 (365)
Q Consensus       283 --~~~~~~~~~~~~~~~~~p~e~A~~i~~~~l~--~~~~~G~~~~~~~g~~~~  331 (365)
                        ..........|++|+.+|+|+|+++++++..  +...+|+.+.+|+|..+.
T Consensus       206 ~~~~~~~~~~~~PlgR~g~peeva~~v~fL~S~~~a~~itG~~i~VDGG~~~~  258 (276)
T d1bdba_         206 TVPLADMLKSVLPIGRMPEVEEYTGAYVFFATRGDAAPATGALLNYDGGLGVR  258 (276)
T ss_dssp             --CHHHHHTTTCTTSSCCCGGGGSHHHHHHHCHHHHTTCSSCEEEESSSGGGC
T ss_pred             cHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCcccCCeeCcEEEECcChhhc
Confidence              0111223335889999999999999954431  235799999999997763

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=2.8e-45  Score=328.26  Aligned_cols=242  Identities=21%  Similarity=0.233  Sum_probs=208.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHH---CCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSR---EGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  132 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~---~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~  132 (365)
                      +|+||++||||||+|||+++|++||+   +|++|++++|++++++++.+++...+++.++.+++||++|+++++++++.+
T Consensus         3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~   82 (259)
T d1oaaa_           3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV   82 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence            58899999999999999999999997   799999999999999999999999888889999999999999999999988


Q ss_pred             HHHHhccCCCCCeeEEEecCCcccC-----CCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCC-CCCeEEEEcCCccc
Q 017812          133 QQWLLDSDMHSSIQLLINNAGILAT-----SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP-VPSRIVNVTSFTHR  206 (365)
Q Consensus       133 ~~~~~~~~~~~~id~lv~nAG~~~~-----~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~-~~g~iV~vsS~~~~  206 (365)
                      .+....  ..+.+|++|||||+..+     ..+.+.++|+++|++|+.|+++++++++|+|++++ ..|+||++||.++.
T Consensus        83 ~~~~~~--~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~  160 (259)
T d1oaaa_          83 RELPRP--EGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCAL  160 (259)
T ss_dssp             HHSCCC--TTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGT
T ss_pred             HHhhhh--ccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCccccccccccccc
Confidence            763211  34689999999998532     34778999999999999999999999999998864 24799999999998


Q ss_pred             ccccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh----H
Q 017812          207 NVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS----F  282 (365)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~----~  282 (365)
                                          .+.+++.+|++||+|+++|+++|+.|     .+||+||+|+||+|+|+|.+....    .
T Consensus       161 --------------------~~~~~~~~Y~asKaal~~lt~~la~e-----~~gIrVn~v~PG~i~T~~~~~~~~~~~~~  215 (259)
T d1oaaa_         161 --------------------QPYKGWGLYCAGKAARDMLYQVLAAE-----EPSVRVLSYAPGPLDNDMQQLARETSKDP  215 (259)
T ss_dssp             --------------------SCCTTCHHHHHHHHHHHHHHHHHHHH-----CTTEEEEEEECCSBSSHHHHHHHHHCSCH
T ss_pred             --------------------CCCccchHHHHHHHHHHHHHHHHHhC-----CCCCEEEEEEcCCCCCHHHHHhhhcCCCH
Confidence                                88999999999999999999999998     469999999999999998764321    1


Q ss_pred             HHHHHHHHHHHhcCCCCHHHHHHHHHHHhcCCCCCcccEEeC
Q 017812          283 LSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFG  324 (365)
Q Consensus       283 ~~~~~~~~~~~~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~  324 (365)
                      .....+....+.+++.+|+|+|+.+++++..+...+|+.+.+
T Consensus       216 ~~~~~~~~~~~~~r~~~p~evA~~i~~ll~~~s~~TG~~idv  257 (259)
T d1oaaa_         216 ELRSKLQKLKSDGALVDCGTSAQKLLGLLQKDTFQSGAHVDF  257 (259)
T ss_dssp             HHHHHHHHHHHTTCSBCHHHHHHHHHHHHHHCCSCTTEEEET
T ss_pred             HHHHHHHhcCCCCCCCCHHHHHHHHHHHhhhccCCCCCeEEe
Confidence            222334455688899999999999997765555678888753

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=100.00  E-value=6.9e-46  Score=328.04  Aligned_cols=233  Identities=24%  Similarity=0.301  Sum_probs=199.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      ++||+||||||++|||+++|++|+++|++|++++|+.+++++..+++     +.++.++++|++++++++++++++.+  
T Consensus         3 l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dls~~~~i~~~~~~i~~--   75 (241)
T d2a4ka1           3 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL-----EAEAIAVVADVSDPKAVEAVFAEALE--   75 (241)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC-----CSSEEEEECCTTSHHHHHHHHHHHHH--
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----CCceEEEEecCCCHHHHHHHHHHHHH--
Confidence            78999999999999999999999999999999999998887666654     56889999999999999999999998  


Q ss_pred             hccCCCCCeeEEEecCCcc--cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017812          137 LDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  214 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~  214 (365)
                          .++++|+||||||..  .+..+.+.++|++++++|+.+++.++++++|+|.++   +.|+++||.+.         
T Consensus        76 ----~~g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~---~~i~~~ss~a~---------  139 (241)
T d2a4ka1          76 ----EFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEG---GSLVLTGSVAG---------  139 (241)
T ss_dssp             ----HHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTT---CEEEEECCCTT---------
T ss_pred             ----HhCCccEeccccccccccchhhhhccccccccccccccccccccccccccccc---cceeecccccc---------
Confidence                458899999999986  445688999999999999999999999999998763   56777776654         


Q ss_pred             CccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHh
Q 017812          215 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLL  294 (365)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  294 (365)
                                  .+.+++..|+++|+|+++|+++|++|++   +.||+||+|+||+|+|++.+..++.. ........|+
T Consensus       140 ------------~~~~~~~~Y~~sK~al~~lt~~lA~el~---~~gIrvN~I~PG~v~T~~~~~~~~~~-~~~~~~~~p~  203 (241)
T d2a4ka1         140 ------------LGAFGLAHYAAGKLGVVGLARTLALELA---RKGVRVNVLLPGLIQTPMTAGLPPWA-WEQEVGASPL  203 (241)
T ss_dssp             ------------CCHHHHHHHHHCSSHHHHHHHHHHHHHT---TTTCEEEEEEECSBCCGGGTTSCHHH-HHHHHHTSTT
T ss_pred             ------------ccccCccccchhhHHHHHHHHHHHHHHh---HhCCEEeeeccCcCCCHHHHhhhHhH-HHHHHhCCCC
Confidence                        3557889999999999999999999998   89999999999999999998776543 2334445789


Q ss_pred             cCCCCHHHHHHHHHHHhcCCC---CCcccEEeCCCCccc
Q 017812          295 GLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRTV  330 (365)
Q Consensus       295 ~~~~~p~e~A~~i~~~~l~~~---~~~G~~~~~~~g~~~  330 (365)
                      +|+.+|+|+|++++  ||.++   ..+|+.+.+|+|..+
T Consensus       204 ~r~~~p~dva~~v~--fL~S~~s~~itG~~i~vDGG~s~  240 (241)
T d2a4ka1         204 GRAGRPEEVAQAAL--FLLSEESAYITGQALYVDGGRSI  240 (241)
T ss_dssp             CSCBCHHHHHHHHH--HHHSGGGTTCCSCEEEESTTTTT
T ss_pred             CCCcCHHHHHHHHH--HHhcchhCCCcCceEEeCCCccc
Confidence            99999999999999  45454   468999999999764

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=1.4e-45  Score=328.48  Aligned_cols=231  Identities=18%  Similarity=0.139  Sum_probs=199.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhccC
Q 017812           61 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  140 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~~  140 (365)
                      |+|||||++|||+++|++|+++|++|++++|+.++++++.+... .       +.++|++|.++++++++++.+      
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~-~-------~~~~dv~~~~~~~~~~~~~~~------   67 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAE-T-------YPQLKPMSEQEPAELIEAVTS------   67 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHH-H-------CTTSEECCCCSHHHHHHHHHH------
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhC-c-------EEEeccCCHHHHHHHHHHHHH------
Confidence            79999999999999999999999999999999988877654432 2       346899999999999999998      


Q ss_pred             CCCCeeEEEecCCcc---cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcc
Q 017812          141 MHSSIQLLINNAGIL---ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNET  217 (365)
Q Consensus       141 ~~~~id~lv~nAG~~---~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~  217 (365)
                      .+++||+||||||+.   .+..+.+.++|++++++|+.++++++++++|+|++++ .|+||++||.++.           
T Consensus        68 ~~G~iDiLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~-~G~IV~isS~~~~-----------  135 (252)
T d1zmta1          68 AYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRK-SGHIIFITSATPF-----------  135 (252)
T ss_dssp             HHSCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCSTTT-----------
T ss_pred             HcCCCCEEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccc-cceeecccccccc-----------
Confidence            568999999999975   3456789999999999999999999999999999876 7999999999998           


Q ss_pred             ccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH-------HHHHHHHH
Q 017812          218 ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF-------LSLMAFTV  290 (365)
Q Consensus       218 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~-------~~~~~~~~  290 (365)
                               .+.+...+|++||+|+++|+++|++|++   +.||+||+|+||+|+|++.......       ........
T Consensus       136 ---------~~~~~~~~Y~asKaal~~lt~~lA~ela---~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~  203 (252)
T d1zmta1         136 ---------GPWKELSTYTSARAGACTLANALSKELG---EYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKK  203 (252)
T ss_dssp             ---------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHH
T ss_pred             ---------cccccccccccccccHHHHHHHHHHHhc---ccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHh
Confidence                     8888999999999999999999999998   8999999999999999998654211       11223344


Q ss_pred             HHHhcCCCCHHHHHHHHHHHhcCCC---CCcccEEeCCCCcccc
Q 017812          291 LKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRTVN  331 (365)
Q Consensus       291 ~~~~~~~~~p~e~A~~i~~~~l~~~---~~~G~~~~~~~g~~~~  331 (365)
                      ..|++|+.+|||+|+.++  ||+++   ..+|+.+.+|+|-.+-
T Consensus       204 ~~pl~R~g~pedvA~~v~--fL~S~~s~~iTG~~i~vdGG~~~~  245 (252)
T d1zmta1         204 VTALQRLGTQKELGELVA--FLASGSCDYLTGQVFWLAGGFPMI  245 (252)
T ss_dssp             HSSSSSCBCHHHHHHHHH--HHHTTSCGGGTTCEEEESTTCCCC
T ss_pred             cCCCCCCcCHHHHHHHHH--HHhCchhcCCcCCeEEECCCceeC
Confidence            568899999999999999  55555   4589999999997763

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=5.3e-45  Score=325.91  Aligned_cols=238  Identities=19%  Similarity=0.214  Sum_probs=196.7

Q ss_pred             CCCCCEEEEecCCC--hHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATS--GLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  133 (365)
Q Consensus        56 ~~~~k~vlITGass--GIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~  133 (365)
                      ||+||++|||||+|  |||+++|++|+++|++|++++|+++..+++.+ +...  ..+..++++|++|+++++++++++.
T Consensus         5 ~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~-~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~   81 (256)
T d1ulua_           5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEK-LAEA--LGGALLFRADVTQDEELDALFAGVK   81 (256)
T ss_dssp             CCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-HHHH--TTCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHH-hhhc--cCcccccccccCCHHHHHHHHHHHH
Confidence            68999999999987  99999999999999999999999766555444 3333  3456789999999999999999999


Q ss_pred             HHHhccCCCCCeeEEEecCCccc------CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccc
Q 017812          134 QWLLDSDMHSSIQLLINNAGILA------TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRN  207 (365)
Q Consensus       134 ~~~~~~~~~~~id~lv~nAG~~~------~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~  207 (365)
                      +      .+++||+||||||+..      +..+.+.++|+..+++|+.+++.+++.++|+|++   .|+||++||..+. 
T Consensus        82 ~------~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~---~G~Iv~isS~~~~-  151 (256)
T d1ulua_          82 E------AFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE---GGGIVTLTYYASE-  151 (256)
T ss_dssp             H------HHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE---EEEEEEEECGGGT-
T ss_pred             H------hcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhcc---CCEEEEEeehHhc-
Confidence            8      5588999999999852      3456788999999999999999999999999976   4899999999998 


Q ss_pred             cccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHH-HHH
Q 017812          208 VFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFL-SLM  286 (365)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~-~~~  286 (365)
                                         .+.++..+|++||+|+++|+++++.|++   ++|||||+|+||+|+|++.+..+... ...
T Consensus       152 -------------------~~~~~~~~Y~asKaal~~ltr~lA~ela---~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~  209 (256)
T d1ulua_         152 -------------------KVVPKYNVMAIAKAALEASVRYLAYELG---PKGVRVNAISAGPVRTVAARSIPGFTKMYD  209 (256)
T ss_dssp             -------------------SBCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEECCC----------CHHHHH
T ss_pred             -------------------CCCCCchHHHHHHHHHHHHHHHHHHHhc---ccCCEEeeeccceeeeccccchhhhHHHHH
Confidence                               8889999999999999999999999998   89999999999999999987654322 223


Q ss_pred             HHHHHHHhcCCCCHHHHHHHHHHHhcCCC---CCcccEEeCCCCccc
Q 017812          287 AFTVLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRTV  330 (365)
Q Consensus       287 ~~~~~~~~~~~~~p~e~A~~i~~~~l~~~---~~~G~~~~~~~g~~~  330 (365)
                      ......|++|+.+|||+|++++  ||+++   ..+|+.+.+|+|..+
T Consensus       210 ~~~~~~pl~R~~~pedvA~~v~--fL~S~~s~~itG~~i~VDGG~~~  254 (256)
T d1ulua_         210 RVAQTAPLRRNITQEEVGNLGL--FLLSPLASGITGEVVYVDAGYHI  254 (256)
T ss_dssp             HHHHHSTTSSCCCHHHHHHHHH--HHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHhcCCCCCCcCHHHHHHHHH--HHhCchhCCccCCeEEECcCEeC
Confidence            3445568999999999999999  55554   458999999999754

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=3.8e-45  Score=327.22  Aligned_cols=238  Identities=24%  Similarity=0.285  Sum_probs=202.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEec-CchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGR-SSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      .|+||+||||||++|||+++|++|+++|++|++++| +.+.++++.+++.+.  +.+++++++|++|+++++++++++.+
T Consensus         3 ~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~--g~~~~~~~~D~~~~~~v~~~~~~~~~   80 (259)
T d1ja9a_           3 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKL--GAQGVAIQADISKPSEVVALFDKAVS   80 (259)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHc--CCCceEecCCCCCHHHHHHHHHHHHH
Confidence            388999999999999999999999999999998754 556678888888776  45889999999999999999999998


Q ss_pred             HHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017812          135 WLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~  212 (365)
                            ++++||+||||||+..  +..+.+.++|++++++|+.+++++++.++|+|+++   |++++++|..+.      
T Consensus        81 ------~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~---g~~iii~s~~~~------  145 (259)
T d1ja9a_          81 ------HFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG---GRIILTSSIAAV------  145 (259)
T ss_dssp             ------HHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE---EEEEEECCGGGT------
T ss_pred             ------HcCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcC---Cccccccccccc------
Confidence                  5688999999999863  45578999999999999999999999999999763   688888887664      


Q ss_pred             CCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc------------h
Q 017812          213 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV------------P  280 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~------------~  280 (365)
                                   ..+.+.+..|++||+|+++|+++|++|++   +.||+||+|+||+++|+|.+..            +
T Consensus       146 -------------~~~~~~~~~Y~asK~al~~l~r~lA~e~~---~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~  209 (259)
T d1ja9a_         146 -------------MTGIPNHALYAGSKAAVEGFCRAFAVDCG---AKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMP  209 (259)
T ss_dssp             -------------CCSCCSCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCC
T ss_pred             -------------ccCCCCchhHHHHHHHHHHHHHHHHHHHh---hcCeEEeccCcCCccChhhhhhhhhhhhhhcccCC
Confidence                         14678899999999999999999999998   8899999999999999986432            1


Q ss_pred             hHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhcCCC---CCcccEEeCCCCc
Q 017812          281 SFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGR  328 (365)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~p~e~A~~i~~~~l~~~---~~~G~~~~~~~g~  328 (365)
                      ............|++|+.+|+|+|++++  ||+++   ..+|+.+.+|+|+
T Consensus       210 ~~~~~~~~~~~~pl~R~g~p~eVa~~v~--fL~S~~a~~itG~~i~vDGG~  258 (259)
T d1ja9a_         210 QEKIDEGLANMNPLKRIGYPADIGRAVS--ALCQEESEWINGQVIKLTGGG  258 (259)
T ss_dssp             HHHHHHHHHHTSTTSSCBCHHHHHHHHH--HHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHHHHHhCCCCCCCcCHHHHHHHHH--HHhCchhcCCcCceEEeCCCC
Confidence            1122233445568899999999999999  66665   3589999999986

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=100.00  E-value=7.4e-45  Score=331.59  Aligned_cols=269  Identities=20%  Similarity=0.179  Sum_probs=222.4

Q ss_pred             CCCCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHH
Q 017812           52 PPITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDS  131 (365)
Q Consensus        52 ~~~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~  131 (365)
                      .+..+++||+||||||++|||+++|++|+++|++|++++|+.++++++.+++.+.+ +.++.++++|+++.++++++++.
T Consensus        18 ~~~~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~-g~~~~~~~~D~~~~~~v~~~~~~   96 (294)
T d1w6ua_          18 LPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQT-GNKVHAIQCDVRDPDMVQNTVSE   96 (294)
T ss_dssp             SCTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-SSCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhc-CCceEEEEecccChHHHHHHhhh
Confidence            34468999999999999999999999999999999999999999999999998776 56789999999999999999999


Q ss_pred             HHHHHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccc
Q 017812          132 LQQWLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVF  209 (365)
Q Consensus       132 ~~~~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~  209 (365)
                      +.+      .++++|+||||||...  +....+.++++..+.+|..+.+.+++...+.+......+++++++|.++.   
T Consensus        97 ~~~------~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~---  167 (294)
T d1w6ua_          97 LIK------VAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAE---  167 (294)
T ss_dssp             HHH------HTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHH---
T ss_pred             hhh------hccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhh---
Confidence            988      6789999999999864  34577889999999999999999999988887766657889999998887   


Q ss_pred             cccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccch--hHHHHHH
Q 017812          210 NAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP--SFLSLMA  287 (365)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~--~~~~~~~  287 (365)
                                       .+.++..+|++||+|+++|++++|+|++   +.|||||+|+||+|+|++.....  .......
T Consensus       168 -----------------~~~~~~~~YsasKaal~~ltk~lA~ela---~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~  227 (294)
T d1w6ua_         168 -----------------TGSGFVVPSASAKAGVEAMSKSLAAEWG---KYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKE  227 (294)
T ss_dssp             -----------------HCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECCBCC------CCTTSHHHHH
T ss_pred             -----------------hcccccchHHHHHHHHHHHHHHHHHHHh---HhCeEEEEEccCccccchhhhccCCcHHHHHH
Confidence                             7778889999999999999999999998   89999999999999999976532  2222333


Q ss_pred             HHHHHHhcCCCCHHHHHHHHHHHhcCCC---CCcccEEeCCCCccccCCcccCCH-HHHHHHHHHHHHh
Q 017812          288 FTVLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRTVNSSALSFNS-KLAGELWTTSCNL  352 (365)
Q Consensus       288 ~~~~~~~~~~~~p~e~A~~i~~~~l~~~---~~~G~~~~~~~g~~~~~~~~~~d~-~~~~~lw~~~~~~  352 (365)
                      .....|++|+.+|+|+|++++  +|+++   ..+|+.+.+|+|+.+-.+....+. ...+..|+.++++
T Consensus       228 ~~~~~pl~R~~~pediA~~v~--fL~sd~s~~itG~~i~vDGG~~l~~~~~~~~~~~~~~~~~~~~~~~  294 (294)
T d1w6ua_         228 MIGRIPCGRLGTVEELANLAA--FLCSDYASWINGAVIKFDGGEEVLISGEFNDLRKVTKEQWDTIEEL  294 (294)
T ss_dssp             HHTTCTTSSCBCHHHHHHHHH--HHTSGGGTTCCSCEEEESTTHHHHHHSTTGGGGGCCHHHHHHHTTC
T ss_pred             HhhcCCCCCCCCHHHHHHHHH--HHhCchhcCCCCcEEEECCChhheeCCCCCchhhcchhhhhhHhhC
Confidence            444568899999999999999  55554   469999999999876555444443 3345678776653

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=6.6e-45  Score=331.60  Aligned_cols=254  Identities=22%  Similarity=0.230  Sum_probs=210.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecC---------chhHHHHHHHHHhhcCCCceEEEEecCCChhhHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRS---------SHLLSETMADITSRNKDARLEAFQVDLSSFQSVL  126 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~---------~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~  126 (365)
                      +++||++|||||++|||+++|++|+++|++|++++|+         .+.++++.+++...     .....+|++|.++++
T Consensus         4 ~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~d~~~~~~~~   78 (302)
T d1gz6a_           4 RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR-----GGKAVANYDSVEAGE   78 (302)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHT-----TCEEEEECCCGGGHH
T ss_pred             CcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhc-----ccccccccchHHHHH
Confidence            4889999999999999999999999999999998764         45677777777553     346789999999999


Q ss_pred             HHHHHHHHHHhccCCCCCeeEEEecCCcc--cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017812          127 KFKDSLQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  204 (365)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~  204 (365)
                      ++++++.+      .+++||+||||||+.  .+..+++.++|++++++|+.|+++++++++|+|++++ .|+||++||.+
T Consensus        79 ~~v~~~~~------~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IV~isS~~  151 (302)
T d1gz6a_          79 KLVKTALD------TFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQN-YGRIIMTASAS  151 (302)
T ss_dssp             HHHHHHHH------HTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCHH
T ss_pred             HHHHHHHH------HcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCC-CcEEEEeCChh
Confidence            99999988      678999999999987  4456889999999999999999999999999999876 79999999999


Q ss_pred             ccccccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHH
Q 017812          205 HRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLS  284 (365)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~  284 (365)
                      +.                    .+.++..+|++||+|+.+|+++|+.|++   +.||+||+|+||++.|++....+... 
T Consensus       152 ~~--------------------~~~~~~~~Y~asKaal~~lt~~la~E~~---~~gIrVN~I~PG~~~t~~~~~~~~~~-  207 (302)
T d1gz6a_         152 GI--------------------YGNFGQANYSAAKLGLLGLANTLVIEGR---KNNIHCNTIAPNAGSRMTETVMPEDL-  207 (302)
T ss_dssp             HH--------------------HCCTTCHHHHHHHHHHHHHHHHHHHHTG---GGTEEEEEEEEECCSTTTGGGSCHHH-
T ss_pred             hc--------------------CCCCCcHHHHHHHHHHHHHHHHHHHHHh---ccCCceeeeCCCCCCcchhhcCcHhh-
Confidence            98                    7889999999999999999999999998   89999999999999998876655421 


Q ss_pred             HHHHHHHHHhcCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcccc------------CCcccCCHHHHHHHHHHHHHh
Q 017812          285 LMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN------------SSALSFNSKLAGELWTTSCNL  352 (365)
Q Consensus       285 ~~~~~~~~~~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~~------------~~~~~~d~~~~~~lw~~~~~~  352 (365)
                                .+..+|||+|..+++++......+|+.+.+|+|....            ......++|....-|+...++
T Consensus       208 ----------~~~~~PedvA~~v~fL~S~~a~itG~~i~vdGG~~~~~~~~~~~g~~~~~~~~~~t~e~i~~~~~~i~d~  277 (302)
T d1gz6a_         208 ----------VEALKPEYVAPLVLWLCHESCEENGGLFEVGAGWIGKLRWERTLGAIVRKRNQPMTPEAVRDNWVKICDF  277 (302)
T ss_dssp             ----------HHHSCGGGTHHHHHHHTSTTCCCCSCEEEEETTEEEEEEEEECCCEECCBTTBCCCHHHHHHTHHHHTCC
T ss_pred             ----------HhcCCHHHHHHHHHHHcCCCcCCCCcEEEeCCCceeEEEEeecCcccccCCCCCCCHHHHHHHHHHHhCc
Confidence                      2345899999999955432235689999988885432            112334556666668776655


Q ss_pred             hhc
Q 017812          353 FIN  355 (365)
Q Consensus       353 ~~~  355 (365)
                      -..
T Consensus       278 ~~~  280 (302)
T d1gz6a_         278 SNA  280 (302)
T ss_dssp             TTC
T ss_pred             ccC
Confidence            433

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=7.1e-45  Score=320.37  Aligned_cols=225  Identities=21%  Similarity=0.230  Sum_probs=191.1

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      |+||++|||||++|||+++|++|+++|++|++++|+++.+++       .    ...++.+|+++.  ++.++    +  
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~-------~----~~~~~~~Dv~~~--~~~~~----~--   62 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKR-------S----GHRYVVCDLRKD--LDLLF----E--   62 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-------T----CSEEEECCTTTC--HHHHH----H--
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHh-------c----CCcEEEcchHHH--HHHHH----H--
Confidence            689999999999999999999999999999999999765543       1    235678999863  44433    3  


Q ss_pred             hccCCCCCeeEEEecCCcc--cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017812          137 LDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  214 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~  214 (365)
                          ++++||+||||||+.  .+..+++.++|++++++|+.++++++|+++|+|++++ .|+||+++|..+.        
T Consensus        63 ----~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~G~ii~i~S~~~~--------  129 (234)
T d1o5ia_          63 ----KVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKG-WGRIVAITSFSVI--------  129 (234)
T ss_dssp             ----HSCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT--------
T ss_pred             ----HhCCCcEEEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccc-ccccccccccccc--------
Confidence                468899999999986  3456889999999999999999999999999999876 7999999999888        


Q ss_pred             CccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHh
Q 017812          215 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLL  294 (365)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  294 (365)
                                  .+.+....|++||+|+++|++++++|++   +.||+||+|+||+++|++.................|+
T Consensus       130 ------------~~~~~~~~Y~asKaal~~ltk~lA~ela---~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~pl  194 (234)
T d1o5ia_         130 ------------SPIENLYTSNSARMALTGFLKTLSFEVA---PYGITVNCVAPGWTETERVKELLSEEKKKQVESQIPM  194 (234)
T ss_dssp             ------------SCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSBCCTTHHHHSCHHHHHHHHTTSTT
T ss_pred             ------------ccccccccchhHHHHHHHHHHHHHHHhc---ccCeEEeecccCccchhhhhhhcCHHHHHHHHhcCCC
Confidence                        7888999999999999999999999998   8999999999999999998764333333334445689


Q ss_pred             cCCCCHHHHHHHHHHHhcCCC---CCcccEEeCCCCccc
Q 017812          295 GLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRTV  330 (365)
Q Consensus       295 ~~~~~p~e~A~~i~~~~l~~~---~~~G~~~~~~~g~~~  330 (365)
                      +|+.+|||+|+.++  ||+++   ..+|+.+.+|+|...
T Consensus       195 ~R~~~pediA~~v~--fL~S~~s~~itG~~i~vDGG~s~  231 (234)
T d1o5ia_         195 RRMAKPEEIASVVA--FLCSEKASYLTGQTIVVDGGLSK  231 (234)
T ss_dssp             SSCBCHHHHHHHHH--HHHSGGGTTCCSCEEEESTTCCC
T ss_pred             CCCcCHHHHHHHHH--HHhChhhcCCcCcEEEECccccc
Confidence            99999999999999  55454   458999999999654

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=100.00  E-value=1.4e-45  Score=328.51  Aligned_cols=236  Identities=18%  Similarity=0.245  Sum_probs=198.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCC-ChhhHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS-SFQSVLKFKDSLQQ  134 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls-~~~~v~~~~~~~~~  134 (365)
                      +++||+||||||++|||+++|++|+++|++|++++|+.++.+++ +++....++.++.++.+|++ +.++++++++++.+
T Consensus         2 ~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~-~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   80 (254)
T d1sbya1           2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTAL-AELKAINPKVNITFHTYDVTVPVAESKKLLKKIFD   80 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHH-HHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHH-HHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHH
Confidence            58899999999999999999999999999999999988775544 56666666789999999998 67789999999998


Q ss_pred             HHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCC--CCCeEEEEcCCccccccccc
Q 017812          135 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP--VPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~--~~g~iV~vsS~~~~~~~~~~  212 (365)
                            ++++||+||||||..      +.+.|++++++|++|+++++++++|+|.+++  ..|+||++||.++.      
T Consensus        81 ------~~g~iDilvnnAG~~------~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~------  142 (254)
T d1sbya1          81 ------QLKTVDILINGAGIL------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGF------  142 (254)
T ss_dssp             ------HHSCCCEEEECCCCC------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGT------
T ss_pred             ------HcCCCCEEEeCCCCC------CHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhc------
Confidence                  558899999999963      5678999999999999999999999997653  36899999999998      


Q ss_pred             CCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHH
Q 017812          213 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLK  292 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~  292 (365)
                                    .+.+++.+|++||+|+.+|+++|+.|+.   +.||+||+|+||+|+|+|.+...............
T Consensus       143 --------------~~~~~~~~Y~asKaal~~~t~~la~el~---~~gIrVn~I~PG~v~T~~~~~~~~~~~~~~~~~~~  205 (254)
T d1sbya1         143 --------------NAIHQVPVYSASKAAVVSFTNSLAKLAP---ITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAEL  205 (254)
T ss_dssp             --------------SCCTTSHHHHHHHHHHHHHHHHHHHHHH---HHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHH
T ss_pred             --------------cCCCCCHHHHHHHHHHHHHHHHHHhhcc---ccCeEEEEEEeCCCcCccccccccchhHHHHHHhc
Confidence                          8899999999999999999999999998   89999999999999999876543322111112222


Q ss_pred             Hh-cCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcc
Q 017812          293 LL-GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRT  329 (365)
Q Consensus       293 ~~-~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~  329 (365)
                      ++ .+..+||++|+.++.+..  ...+|+.+..|+|+-
T Consensus       206 ~~~~~~~~~e~va~~~~~~~~--~~~tG~vi~vdgG~l  241 (254)
T d1sbya1         206 LLSHPTQTSEQCGQNFVKAIE--ANKNGAIWKLDLGTL  241 (254)
T ss_dssp             HTTSCCEEHHHHHHHHHHHHH--HCCTTCEEEEETTEE
T ss_pred             cccCCCCCHHHHHHHHHHhhh--CCCCCCEEEECCCEe
Confidence            33 346799999999985443  345999999999963

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=1.9e-44  Score=324.95  Aligned_cols=242  Identities=20%  Similarity=0.311  Sum_probs=205.3

Q ss_pred             CCCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecC-chhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHH
Q 017812           53 PITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRS-SHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDS  131 (365)
Q Consensus        53 ~~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~  131 (365)
                      ...+|+||++||||||+|||+++|++|+++|++|++++|+ .+.++++.+++.+.  +.++.++++|++|++++++++++
T Consensus        12 ~~~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~--g~~~~~~~~D~~~~~~v~~~~~~   89 (272)
T d1g0oa_          12 QSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKN--GSDAACVKANVGVVEDIVRMFEE   89 (272)
T ss_dssp             GGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCcCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhh--CCceeeEeCCCCCHHHHHHHHHH
Confidence            3456999999999999999999999999999999999887 45677888888776  46889999999999999999999


Q ss_pred             HHHHHhccCCCCCeeEEEecCCcc--cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccc
Q 017812          132 LQQWLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVF  209 (365)
Q Consensus       132 ~~~~~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~  209 (365)
                      +.+      .++++|++|||||..  .+..+.+.++|++.+++|+.++++++++++|+|.++   |++++++|..+.   
T Consensus        90 ~~~------~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~---g~~i~i~s~~~~---  157 (272)
T d1g0oa_          90 AVK------IFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIG---GRLILMGSITGQ---  157 (272)
T ss_dssp             HHH------HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTT---CEEEEECCGGGT---
T ss_pred             HHH------HhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccc---cccccccccccc---
Confidence            998      558899999999986  345678999999999999999999999999999763   799999988755   


Q ss_pred             cccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh--------
Q 017812          210 NAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS--------  281 (365)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~--------  281 (365)
                                      ..+.++...|++||+|+++|+++|++|++   +.|||||+|+||+|+|++.+....        
T Consensus       158 ----------------~~~~~~~~~Y~asKaal~~ltk~lA~e~~---~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~  218 (272)
T d1g0oa_         158 ----------------AKAVPKHAVYSGSKGAIETFARCMAIDMA---DKKITVNVVAPGGIKTDMYHAVCREYIPNGEN  218 (272)
T ss_dssp             ----------------CSSCSSCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEEEECCBSSHHHHHHGGGGSTTCTT
T ss_pred             ----------------cccccchhhHHHHHHHHHHHHHHHHHHhc---hhCeEEEEEccCCcCChHHHHHHHhhhhcccc
Confidence                            14677788999999999999999999998   899999999999999998654211        


Q ss_pred             ----HHHHHHHHHHHHhcCCCCHHHHHHHHHHHhcCCC---CCcccEEeCCCCcc
Q 017812          282 ----FLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRT  329 (365)
Q Consensus       282 ----~~~~~~~~~~~~~~~~~~p~e~A~~i~~~~l~~~---~~~G~~~~~~~g~~  329 (365)
                          ...........|++|+.+|+|+|++++  +|+++   ..+|+.+.+|+|..
T Consensus       219 ~~~~~~~~~~~~~~~PlgR~~~peevA~~v~--fL~s~~s~~itG~~i~vDGG~~  271 (272)
T d1g0oa_         219 LSNEEVDEYAAVQWSPLRRVGLPIDIARVVC--FLASNDGGWVTGKVIGIDGGAC  271 (272)
T ss_dssp             CCHHHHHHHHHHHSCTTCSCBCHHHHHHHHH--HHHSGGGTTCCSCEEEESTTCC
T ss_pred             cchHHHHHHHHHccCCCCCCcCHHHHHHHHH--HHhCchhcCccCceEeECCCCC
Confidence                111222334468899999999999999  45554   45899999999964

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.6e-44  Score=315.30  Aligned_cols=232  Identities=20%  Similarity=0.249  Sum_probs=194.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      .++||+||||||++|||+++|++|+++|++|++++|++++++++.+       ...+....+|+.+.+.++...+     
T Consensus         3 ~l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~-------~~~~~~~~~d~~~~~~~~~~~~-----   70 (245)
T d2ag5a1           3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEK-------YPGIQTRVLDVTKKKQIDQFAN-----   70 (245)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGG-------STTEEEEECCTTCHHHHHHHHH-----
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-------ccCCceeeeecccccccccccc-----
Confidence            4899999999999999999999999999999999999887765432       2357788889988766655443     


Q ss_pred             HhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          136 LLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                           ..+++|+||||||...  +..+++.++|++.+++|+.+++++++++.|+|.+++ .|+||++||..+.       
T Consensus        71 -----~~~~id~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~-~g~Ii~isS~~~~-------  137 (245)
T d2ag5a1          71 -----EVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQK-SGNIINMSSVASS-------  137 (245)
T ss_dssp             -----HCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTT-------
T ss_pred             -----ccccceeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCC-Cceeeeeechhhc-------
Confidence                 3578999999999874  456889999999999999999999999999998887 7999999998764       


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH-----HHHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF-----LSLMAF  288 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~-----~~~~~~  288 (365)
                                  ..+.++..+|++||+|+++|+|+|+.|++   ++||+||+|+||+|+|++.+.....     ......
T Consensus       138 ------------~~~~~~~~~Y~~sKaal~~l~r~lA~e~~---~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~  202 (245)
T d2ag5a1         138 ------------VKGVVNRCVYSTTKAAVIGLTKSVAADFI---QQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDF  202 (245)
T ss_dssp             ------------TBCCTTBHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHH
T ss_pred             ------------cCCccchhHHHHHHHHHHHHHHHHHHHhh---hhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHH
Confidence                        14678889999999999999999999998   8999999999999999997653221     112233


Q ss_pred             HHHHHhcCCCCHHHHHHHHHHHhcCCC---CCcccEEeCCCCcc
Q 017812          289 TVLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRT  329 (365)
Q Consensus       289 ~~~~~~~~~~~p~e~A~~i~~~~l~~~---~~~G~~~~~~~g~~  329 (365)
                      ....|++|+.+|+|+|+.+.+  |+++   ..+|+.+.+|+|..
T Consensus       203 ~~~~pl~R~~~pedva~~v~f--L~s~~s~~iTG~~i~VDGG~s  244 (245)
T d2ag5a1         203 LKRQKTGRFATAEEIAMLCVY--LASDESAYVTGNPVIIDGGWS  244 (245)
T ss_dssp             HHTCTTSSCEEHHHHHHHHHH--HHSGGGTTCCSCEEEECTTGG
T ss_pred             HhcCCCCCCcCHHHHHHHHHH--HhChhhCCCcCceEEeCCCcC
Confidence            344688999999999999994  5444   56999999999864

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-43  Score=318.32  Aligned_cols=238  Identities=26%  Similarity=0.319  Sum_probs=191.1

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHC-CCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           59 RPVCIVTGATSGLGAAAAYALSRE-GFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~-G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      ++++|||||++|||+++|++|+++ |++|++++|++++++++.+++++.+  .++.+++||++|.++++++++++.+   
T Consensus         3 ~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dvs~~~sv~~~~~~~~~---   77 (275)
T d1wmaa1           3 IHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEG--LSPRFHQLDIDDLQSIRALRDFLRK---   77 (275)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTT--CCCEEEECCTTCHHHHHHHHHHHHH---
T ss_pred             CeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEEEecCCHHHHHHHHHHHHH---
Confidence            356799999999999999999986 8999999999999999999998874  5688999999999999999999998   


Q ss_pred             ccCCCCCeeEEEecCCcccC--CCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCC
Q 017812          138 DSDMHSSIQLLINNAGILAT--SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNN  215 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~--~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~  215 (365)
                         ++++||+||||||+..+  ..+.+.++|+.+|++|++|++++++.++|+|++   .||||++||.++..+.....++
T Consensus        78 ---~~g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~---~g~ivnisS~~~~~~~~~~~~y  151 (275)
T d1wmaa1          78 ---EYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP---QGRVVNVSSIMSVRALKSCSPE  151 (275)
T ss_dssp             ---HHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEECCHHHHHHHHTSCHH
T ss_pred             ---hcCCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCcccccccceeccccccchh
Confidence               55889999999999743  345678899999999999999999999999976   4899999998875432211100


Q ss_pred             ---------c-c-----------ccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCC-CCCCeEEEEecCCcccC
Q 017812          216 ---------E-T-----------ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLD-KSRHVSVIAADPGVVKT  273 (365)
Q Consensus       216 ---------~-~-----------~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~-~~~gi~v~~v~PG~v~T  273 (365)
                               . .           ..........+..+..+|++||+++.+|++.+++|++.. ...||+||+|+||+|+|
T Consensus       152 ~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T  231 (275)
T d1wmaa1         152 LQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRT  231 (275)
T ss_dssp             HHHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCS
T ss_pred             hhhhhcccccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccC
Confidence                     0 0           000000001233445689999999999999999998621 24699999999999999


Q ss_pred             CccccchhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhcCCCC---CcccEEe
Q 017812          274 NIMREVPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPE---TSGVYFF  323 (365)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~A~~i~~~~l~~~~---~~G~~~~  323 (365)
                      +|.+..                ...+|||+|+.++++++.+++   .+|+|+.
T Consensus       232 ~m~~~~----------------~~~~pee~A~~~~~~a~~~~~~~~~~G~~~~  268 (275)
T d1wmaa1         232 DMAGPK----------------ATKSPEEGAETPVYLALLPPDAEGPHGQFVS  268 (275)
T ss_dssp             TTTCTT----------------CSBCHHHHTHHHHHHHSCCTTCCCCCSCEEE
T ss_pred             CcccCc----------------ccCCHHHHHHHHHHHHcCChhhcCCCeEEEE
Confidence            998653                245999999999998876653   4788886

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-42  Score=314.52  Aligned_cols=224  Identities=22%  Similarity=0.251  Sum_probs=179.2

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEE---EEecCchhHHHHHHHHHhh-cCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVV---LVGRSSHLLSETMADITSR-NKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vi---l~~r~~~~~~~~~~~l~~~-~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      .|+|||||||+|||+++|++|+++|++|+   +++|+.+..+++.+...+. ..+.++.+++||++|.++++++++++. 
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~-   80 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT-   80 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT-
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhcc-
Confidence            58999999999999999999999998754   4566655544444443332 235689999999999999999988763 


Q ss_pred             HHhccCCCCCeeEEEecCCcc--cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017812          135 WLLDSDMHSSIQLLINNAGIL--ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~  212 (365)
                             ++.+|+||||||..  .+..+.+.++|++++++|+.|+++++++++|+|++++ .|+||++||.++.      
T Consensus        81 -------~g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~-~G~Iv~isS~~g~------  146 (285)
T d1jtva_          81 -------EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRG-SGRVLVTGSVGGL------  146 (285)
T ss_dssp             -------TSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGT------
T ss_pred             -------ccchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcC-CCceEEEechhhc------
Confidence                   37899999999986  3456789999999999999999999999999999876 7999999999998      


Q ss_pred             CCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH----------
Q 017812          213 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF----------  282 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~----------  282 (365)
                                    .+.+++.+|++||+|+++|+++|+.|++   +.||+||+|+||+|+|+|.++....          
T Consensus       147 --------------~~~~~~~~Y~asKaal~~l~~~la~El~---~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~  209 (285)
T d1jtva_         147 --------------MGLPFNDVYCASKFALEGLCESLAVLLL---PFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDI  209 (285)
T ss_dssp             --------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECCBCC-------CCHHHHHHTSCH
T ss_pred             --------------CCCCCchHHHHHHHHHHHHHHHHHHHhh---ccCcEEEEEecCCCCChHHHHhccCHHHHhhccch
Confidence                          8899999999999999999999999998   8999999999999999998653210          


Q ss_pred             ---H---HHHHHHHHHHhcCCCCHHHHHHHHHHHhcCC
Q 017812          283 ---L---SLMAFTVLKLLGLLQSPEKGINSVLDAALAP  314 (365)
Q Consensus       283 ---~---~~~~~~~~~~~~~~~~p~e~A~~i~~~~l~~  314 (365)
                         .   .........+.++..+|||+|+.+++++..+
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~PeeVA~~v~~~~~~~  247 (285)
T d1jtva_         210 HTFHRFYQYLAHSKQVFREAAQNPEEVAEVFLTALRAP  247 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCBCHHHHHHHHHHHHHCS
T ss_pred             hHHHHHHHHHHHHhhhhcccCCCHHHHHHHHHHHHhCC
Confidence               0   0111122234557789999999999866554

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.3e-42  Score=304.06  Aligned_cols=232  Identities=19%  Similarity=0.237  Sum_probs=192.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      +++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++     +.......+|+.+.+.++...+.+.. 
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l-----~~~~~~~~~~~~~~~~~~~~~~~~~~-   75 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL-----GNNCVFAPADVTSEKDVQTALALAKG-   75 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh-----CCCccccccccccccccccccccccc-
Confidence            589999999999999999999999999999999999999999988887     55788999999999999999998887 


Q ss_pred             HhccCCCCCeeEEEecCCccc--------CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCC-----CCCeEEEEcC
Q 017812          136 LLDSDMHSSIQLLINNAGILA--------TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP-----VPSRIVNVTS  202 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~--------~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~-----~~g~iV~vsS  202 (365)
                           ....+|.+++|+++..        +..+.+.+.|++++++|+.|+++++++++|+|..+.     ..|+||++||
T Consensus        76 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS  150 (248)
T d2o23a1          76 -----KFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTAS  150 (248)
T ss_dssp             -----HHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECC
T ss_pred             -----ccccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecc
Confidence                 4477999999988652        234567899999999999999999999999987541     3689999999


Q ss_pred             CcccccccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH
Q 017812          203 FTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF  282 (365)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~  282 (365)
                      .++.                    .+.+++.+|++||+|+++|+++|++|++   +.||+||+|+||+++|++....++.
T Consensus       151 ~~~~--------------------~~~~~~~~Y~asKaal~~lt~~la~e~~---~~gIrvN~I~PG~i~T~~~~~~~~~  207 (248)
T d2o23a1         151 VAAF--------------------EGQVGQAAYSASKGGIVGMTLPIARDLA---PIGIRVMTIAPGLFGTPLLTSLPEK  207 (248)
T ss_dssp             THHH--------------------HCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECCBCCC--------
T ss_pred             hhhc--------------------cCCCCchHHHHHHHHHHHHHHHHHHHhc---ccCcceeeeccCceecchhhcCCHH
Confidence            9998                    7889999999999999999999999998   8999999999999999998876543


Q ss_pred             HHHHHHHHHHHh-cCCCCHHHHHHHHHHHhcCCCCCcccEEe
Q 017812          283 LSLMAFTVLKLL-GLLQSPEKGINSVLDAALAPPETSGVYFF  323 (365)
Q Consensus       283 ~~~~~~~~~~~~-~~~~~p~e~A~~i~~~~l~~~~~~G~~~~  323 (365)
                      ... ......|+ +|+.+|||+|+++++++ +++..+|+.+.
T Consensus       208 ~~~-~~~~~~pl~~R~g~peevA~~v~fL~-s~~~itGq~I~  247 (248)
T d2o23a1         208 VCN-FLASQVPFPSRLGDPAEYAHLVQAII-ENPFLNGEVIR  247 (248)
T ss_dssp             --C-HHHHTCSSSCSCBCHHHHHHHHHHHH-HCTTCCSCEEE
T ss_pred             HHH-HHHhcCCCCCCCcCHHHHHHHHHHHH-hCCCCCceEeE
Confidence            222 12223344 88999999999999765 34566777653

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=100.00  E-value=1.6e-41  Score=301.75  Aligned_cols=228  Identities=20%  Similarity=0.257  Sum_probs=183.9

Q ss_pred             CCEEEEecCCChHHHHHHHHHH---HCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           59 RPVCIVTGATSGLGAAAAYALS---REGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la---~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      .|+|||||||+|||+++|++|+   ++|++|++++|++++++++.+ +.+.  +.++.+++||++|+++++++++++++.
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~-~~~~--~~~~~~~~~Dvs~~~~v~~~~~~i~~~   78 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELED-LAKN--HSNIHILEIDLRNFDAYDKLVADIEGV   78 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHH-HHHH--CTTEEEEECCTTCGGGHHHHHHHHHHH
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-HHhc--CCcEEEEEEEeccHHHHHHHHhhhHHH
Confidence            4799999999999999999996   579999999999999887754 4333  458899999999999999999988653


Q ss_pred             HhccCCCCCeeEEEecCCcccC---CCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCC----------CCCeEEEEcC
Q 017812          136 LLDSDMHSSIQLLINNAGILAT---SSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP----------VPSRIVNVTS  202 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~~---~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~----------~~g~iV~vsS  202 (365)
                      .    .+++||+||||||+..+   ..+.+.+++++++++|+.|+++++++++|+|+++.          ..|++|+++|
T Consensus        79 ~----~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S  154 (248)
T d1snya_          79 T----KDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSS  154 (248)
T ss_dssp             H----GGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECC
T ss_pred             h----hcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccc
Confidence            3    45789999999998643   45778999999999999999999999999997631          2589999999


Q ss_pred             CcccccccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH
Q 017812          203 FTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF  282 (365)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~  282 (365)
                      ..+....                 .+.+++.+|++||+|+.+|+++++.|++   +.||+|++|+||+|+|+|.....+ 
T Consensus       155 ~~g~~~~-----------------~~~~~~~~Y~aSKaal~~lt~~la~e~~---~~gI~vn~v~PG~v~T~m~~~~~~-  213 (248)
T d1snya_         155 ILGSIQG-----------------NTDGGMYAYRTSKSALNAATKSLSVDLY---PQRIMCVSLHPGWVKTDMGGSSAP-  213 (248)
T ss_dssp             GGGCSTT-----------------CCSCCCHHHHHHHHHHHHHHHHHHHHHG---GGTCEEEEECCCSBCSTTTCTTCS-
T ss_pred             cccccCC-----------------CCCCChHHHHHHHHHHHHHHHHHHHHhC---CCCeEEEEcCCCcccCCcccccCC-
Confidence            9876211                 3456778999999999999999999998   899999999999999999875422 


Q ss_pred             HHHHHHHHHHHhcCCCCHHHHHHHHHHHhcC-CCCCcccEEeCCCCccc
Q 017812          283 LSLMAFTVLKLLGLLQSPEKGINSVLDAALA-PPETSGVYFFGGKGRTV  330 (365)
Q Consensus       283 ~~~~~~~~~~~~~~~~~p~e~A~~i~~~~l~-~~~~~G~~~~~~~g~~~  330 (365)
                                     .++++.+..+++.+.. .+..+|+|+.. +|+++
T Consensus       214 ---------------~~~~~~~~~i~~~i~~l~~~~tG~~i~~-dG~~i  246 (248)
T d1snya_         214 ---------------LDVPTSTGQIVQTISKLGEKQNGGFVNY-DGTPL  246 (248)
T ss_dssp             ---------------BCHHHHHHHHHHHHHHCCGGGTTCEECT-TSCBC
T ss_pred             ---------------CCchHHHHHHHHHHHhcCccCCCcEEEE-CCeEc
Confidence                           1344444444443332 34568998865 56655

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=1.6e-41  Score=302.02  Aligned_cols=233  Identities=22%  Similarity=0.299  Sum_probs=181.1

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~--~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      |+.|+|||||||+|||+++|++|+++|+  +|++++|+.++++++.+    .. +.+++++++|++|.++++++++++.+
T Consensus         1 M~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~----~~-~~~~~~~~~Dvs~~~~v~~~~~~i~~   75 (250)
T d1yo6a1           1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS----IK-DSRVHVLPLTVTCDKSLDTFVSKVGE   75 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT----CC-CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CcCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHH----hh-CCceEEEEEecCCHHHHHHHHHHHHH
Confidence            3569999999999999999999999996  79999999988776442    22 56899999999999999999999988


Q ss_pred             HHhccCCCCCeeEEEecCCccc---CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCC----------CCCeEEEEc
Q 017812          135 WLLDSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP----------VPSRIVNVT  201 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~----------~~g~iV~vs  201 (365)
                      .++.    .+||+||||||+..   +..+.+.++|++++++|++|++++++.++|+|++++          ..+++++++
T Consensus        76 ~~~~----~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s  151 (250)
T d1yo6a1          76 IVGS----DGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITIS  151 (250)
T ss_dssp             HHGG----GCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEEC
T ss_pred             HhCC----CCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccc
Confidence            6532    35999999999864   345778999999999999999999999999997642          247899998


Q ss_pred             CCcccccccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh
Q 017812          202 SFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS  281 (365)
Q Consensus       202 S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~  281 (365)
                      |..+......             ...+..+..+|++||+|+.+|+++|+.|++   +.||+|++|+||+|+|+|....  
T Consensus       152 ~~~~~~~~~~-------------~~~~~~~~~aY~aSKaal~~l~~~la~el~---~~gI~v~~i~PG~v~T~m~~~~--  213 (250)
T d1yo6a1         152 SGLGSITDNT-------------SGSAQFPVLAYRMSKAAINMFGRTLAVDLK---DDNVLVVNFCPGWVQTNLGGKN--  213 (250)
T ss_dssp             CGGGCSTTCC-------------STTSSSCBHHHHHHHHHHHHHHHHHHHHTG---GGTCEEEEEECCCC----------
T ss_pred             cccccccCCc-------------ccccchhHHHHHHHHHHHHHHHHHHHHHhc---ccCeEEEEEecCCCCCCCCCCC--
Confidence            8765521100             013344567899999999999999999998   8999999999999999997532  


Q ss_pred             HHHHHHHHHHHHhcCCCCHHHHHHHHHHHhcCCC-CCcccEEeCCCCcccc
Q 017812          282 FLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKGRTVN  331 (365)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~p~e~A~~i~~~~l~~~-~~~G~~~~~~~g~~~~  331 (365)
                                    ...+|||+|..+++.+...+ ..+|.||. .+|+|.+
T Consensus       214 --------------~~~~~e~~a~~~~~~~~~~~~~~sG~f~~-~~g~p~~  249 (250)
T d1yo6a1         214 --------------AALTVEQSTAELISSFNKLDNSHNGRFFM-RNLKPYE  249 (250)
T ss_dssp             -------------------HHHHHHHHHHHTTCCGGGTTCEEE-TTEEECC
T ss_pred             --------------CCCCHHHHHHHHHHHHhcCCCCCCeEEEC-CCCeeCC
Confidence                          12489999999998776644 56899875 5678764

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-40  Score=298.27  Aligned_cols=220  Identities=22%  Similarity=0.274  Sum_probs=190.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      |+||+|||||||+|||+++|++|+++|++|++++|++++++++.+++.... +..+..+.+|+++.+++....+.+.+  
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~--   88 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELG-AASAHYIAGTMEDMTFAEQFVAQAGK--   88 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHT-CSEEEEEECCTTCHHHHHHHHHHHHH--
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhh-cccchhhhhhhhhHHHHHHHHHHHHH--
Confidence            899999999999999999999999999999999999999999999987765 56889999999999999999999888  


Q ss_pred             hccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017812          137 LDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  214 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~  214 (365)
                          ..+.+|+++||||...  +..+.+.+++++++++|+.|++.+++.++|+|+++  .|+||++||.++.        
T Consensus        89 ----~~g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~--~G~ii~isS~~~~--------  154 (269)
T d1xu9a_          89 ----LMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS--NGSIVVVSSLAGK--------  154 (269)
T ss_dssp             ----HHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEEEGGGT--------
T ss_pred             ----HhCCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhc--CCcceEeccchhc--------
Confidence                4588999999999863  44577999999999999999999999999999865  4999999999998        


Q ss_pred             CccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHh
Q 017812          215 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLL  294 (365)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  294 (365)
                                  .+.+++.+|++||+|+++|+++|+.|++.. +.||+|++|+||+|+|+|.++.....         +.
T Consensus       155 ------------~~~p~~~~Y~asKaal~~~~~~La~El~~~-~~~I~V~~v~PG~v~T~~~~~~~~~~---------~~  212 (269)
T d1xu9a_         155 ------------VAYPMVAAYSASKFALDGFFSSIRKEYSVS-RVNVSITLCVLGLIDTETAMKAVSGI---------VH  212 (269)
T ss_dssp             ------------SCCTTCHHHHHHHHHHHHHHHHHHHHHHHH-TCCCEEEEEEECCBCCHHHHHHSCGG---------GG
T ss_pred             ------------CCCCCchHHHHHHHHHHHHHHHHHHHhhhc-CCCEEEEEEecCcCCCcHHHHhccCC---------cc
Confidence                        889999999999999999999999998611 36899999999999999875422111         01


Q ss_pred             cCCCCHHHHHHHHHHHhcCCC
Q 017812          295 GLLQSPEKGINSVLDAALAPP  315 (365)
Q Consensus       295 ~~~~~p~e~A~~i~~~~l~~~  315 (365)
                      ....+||++|+.++.......
T Consensus       213 ~~~~~~e~~a~~i~~~~~~~~  233 (269)
T d1xu9a_         213 MQAAPKEECALEIIKGGALRQ  233 (269)
T ss_dssp             GGCBCHHHHHHHHHHHHHTTC
T ss_pred             ccCCCHHHHHHHHHHHhhcCC
Confidence            124589999999997655433

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.2e-38  Score=283.16  Aligned_cols=238  Identities=16%  Similarity=0.184  Sum_probs=201.6

Q ss_pred             CCCCEEEEecCCC--hHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATS--GLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        57 ~~~k~vlITGass--GIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      |+||++|||||+|  |||+++|+.|+++|++|++++|+++..+.+ +++...  ......+.+|+++..++...++++.+
T Consensus         3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (258)
T d1qsga_           3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRV-EEFAAQ--LGSDIVLQCDVAEDASIDTMFAELGK   79 (258)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHH-HHHHHH--TTCCCEEECCTTCHHHHHHHHHHHHT
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHHHhh--cCCcceeecccchHHHHHHHHHHhhh
Confidence            7899999999998  899999999999999999999997655554 444443  34567889999999999999998887


Q ss_pred             HHhccCCCCCeeEEEecCCcccCC-------CCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccc
Q 017812          135 WLLDSDMHSSIQLLINNAGILATS-------SRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRN  207 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~~~-------~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~  207 (365)
                            ..+++|++||||+.....       .....+.+...+.+|+.+.+.+++.+.|.|.+   .++||++||.++. 
T Consensus        80 ------~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~Ii~iss~~~~-  149 (258)
T d1qsga_          80 ------VWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP---GSALLTLSYLGAE-  149 (258)
T ss_dssp             ------TCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEECGGGT-
T ss_pred             ------cccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccC---CcEEEEecchhhc-
Confidence                  789999999999986322       13466779999999999999999999999965   4689999999887 


Q ss_pred             cccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH-HHHH
Q 017812          208 VFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF-LSLM  286 (365)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~-~~~~  286 (365)
                                         .+.|.+.+|++||+|+++|++++++|++   ++||+||+|+||+|+|++....... ....
T Consensus       150 -------------------~~~~~~~~Y~~sKaal~~ltr~lA~el~---~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~  207 (258)
T d1qsga_         150 -------------------RAIPNYNVMGLAKASLEANVRYMANAMG---PEGVRVNAISAGPIRTLAASGIKDFRKMLA  207 (258)
T ss_dssp             -------------------SBCTTTTHHHHHHHHHHHHHHHHHHHHT---TTTEEEEEEEECCCCCTTGGGSTTHHHHHH
T ss_pred             -------------------cCCCCcHHHHHHHHHHHHHHHHHHHHhC---ccCceeecccccccccccccccchhhhHHH
Confidence                               7888899999999999999999999998   8999999999999999998765432 2233


Q ss_pred             HHHHHHHhcCCCCHHHHHHHHHHHhcCCC---CCcccEEeCCCCcccc
Q 017812          287 AFTVLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRTVN  331 (365)
Q Consensus       287 ~~~~~~~~~~~~~p~e~A~~i~~~~l~~~---~~~G~~~~~~~g~~~~  331 (365)
                      ......|++|+.+|||+|+.++  ||+++   ..+|+.+.+|+|..+.
T Consensus       208 ~~~~~~pl~R~~~peeia~~v~--fL~s~~s~~itG~~i~vDGG~~i~  253 (258)
T d1qsga_         208 HCEAVTPIRRTVTIEDVGNSAA--FLCSDLSAGISGEVVHVDGGFSIA  253 (258)
T ss_dssp             HHHHHSTTSSCCCHHHHHHHHH--HHTSGGGTTCCSCEEEESTTGGGB
T ss_pred             HHHhCCCCCCCcCHHHHHHHHH--HHhCchhcCccCceEEECcCHHHh
Confidence            4445678999999999999999  55555   4689999999998663

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=100.00  E-value=1.4e-38  Score=286.99  Aligned_cols=258  Identities=17%  Similarity=0.202  Sum_probs=201.8

Q ss_pred             CCCCEEEEecCCC--hHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATS--GLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        57 ~~~k~vlITGass--GIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      |+||++|||||+|  |||+++|++|+++|++|++++|+++ +++..+++.+..  ....++++|+++.++++++++++.+
T Consensus         3 L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~-~~~~~~~l~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~   79 (274)
T d2pd4a1           3 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQEL--NSPYVYELDVSKEEHFKSLYNSVKK   79 (274)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHT--TCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHhhC--CceeEeeecccchhhHHHHHHHHHH
Confidence            7899999999865  9999999999999999999999954 445566666663  4567899999999999999999998


Q ss_pred             HHhccCCCCCeeEEEecCCcccCC---C---CCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccc
Q 017812          135 WLLDSDMHSSIQLLINNAGILATS---S---RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNV  208 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~~~---~---~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~  208 (365)
                            .++++|++|||+|.....   .   ....+.+...+.++..+.....+...+.+..   .+.|+++||.+..  
T Consensus        80 ------~~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~s~~~~~--  148 (274)
T d2pd4a1          80 ------DLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN---GASVLTLSYLGST--  148 (274)
T ss_dssp             ------HTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEECGGGT--
T ss_pred             ------HcCCCCeEEeecccccccccccccccccchhhhhhhcccccccccccccccccccc---Ccceeeecccccc--
Confidence                  568999999999986332   1   2234445555555555666666655555433   3467777777766  


Q ss_pred             ccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHH-HHHH
Q 017812          209 FNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFL-SLMA  287 (365)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~-~~~~  287 (365)
                                        .+.+....|++||+|+++++++++.|++   +.||+||+|+||+++|++........ ....
T Consensus       149 ------------------~~~~~~~~y~asK~al~~ltr~lA~e~~---~~GIrvN~I~PG~v~T~~~~~~~~~~~~~~~  207 (274)
T d2pd4a1         149 ------------------KYMAHYNVMGLAKAALESAVRYLAVDLG---KHHIRVNALSAGPIRTLASSGIADFRMILKW  207 (274)
T ss_dssp             ------------------SBCTTCHHHHHHHHHHHHHHHHHHHHHH---TTTCEEEEEEECCCCCTTGGGSTTHHHHHHH
T ss_pred             ------------------cccccchhhhHHHHHHHHHHHhhHHHhc---CcCceecccccCcccCccccccCchHHHHHH
Confidence                              6777888999999999999999999998   89999999999999999987765433 2333


Q ss_pred             HHHHHHhcCCCCHHHHHHHHHHHhcCCC---CCcccEEeCCCCccc-cCCcccCCHHHHHHHHHHHHH
Q 017812          288 FTVLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRTV-NSSALSFNSKLAGELWTTSCN  351 (365)
Q Consensus       288 ~~~~~~~~~~~~p~e~A~~i~~~~l~~~---~~~G~~~~~~~g~~~-~~~~~~~d~~~~~~lw~~~~~  351 (365)
                      .....|++|+.+|+|+|+.++  ||.++   ..+|+.+.+|+|..+ -......+++.+..+|..+++
T Consensus       208 ~~~~~p~~r~~~pedIA~~v~--fL~S~~s~~itG~~i~vDGG~~~~g~~~~~~~~~~~~~~~~~~~~  273 (274)
T d2pd4a1         208 NEINAPLRKNVSLEEVGNAGM--YLLSSLSSGVSGEVHFVDAGYHVMGMGAVEEKDNKATLLWDLHKE  273 (274)
T ss_dssp             HHHHSTTSSCCCHHHHHHHHH--HHHSGGGTTCCSCEEEESTTGGGBSSCCCTTCTTTTCCHHHHSSC
T ss_pred             HhhhhhccCCcCHHHHHHHHH--HHhChhhCCCcCceEEECCChhhccCCcccccccchhhhhhhhcc
Confidence            445568899999999999999  55454   469999999999865 344446777889999987653

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=100.00  E-value=5.5e-38  Score=284.40  Aligned_cols=236  Identities=19%  Similarity=0.205  Sum_probs=184.7

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEecC-chhHHHHHHHHHhhcCCCceEE-----------------EEecCCC
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRS-SHLLSETMADITSRNKDARLEA-----------------FQVDLSS  121 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~~Vil~~r~-~~~~~~~~~~l~~~~~~~~~~~-----------------~~~Dls~  121 (365)
                      +++|||||++|||+++|++|+++|++|++++|+ .+.++++.+++.+.++. ....                 +.+|+++
T Consensus         3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~dv~~   81 (284)
T d1e7wa_           3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPN-SAITVQADLSNVATAPVSGADGSAPVTL   81 (284)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTT-CEEEEECCCSSSCBCCCC----CCCBCH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCC-ceEEEEeecccccccccccccccccCCC
Confidence            589999999999999999999999999998765 56678888888776543 3333                 4566999


Q ss_pred             hhhHHHHHHHHHHHHhccCCCCCeeEEEecCCcccC--CCCCCHHHH--------------hHhHHHHhHHHHHHHHHHh
Q 017812          122 FQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILAT--SSRLTPEGY--------------DQMMSTNYIGAFFLTKLLL  185 (365)
Q Consensus       122 ~~~v~~~~~~~~~~~~~~~~~~~id~lv~nAG~~~~--~~~~~~~~~--------------~~~~~vN~~~~~~l~~~~l  185 (365)
                      .++++++++++.+      ++++||+||||||+..+  ..+.+.+++              ..+|.+|+.+++++++.+.
T Consensus        82 ~~~v~~~~~~~~~------~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~  155 (284)
T d1e7wa_          82 FTRCAELVAACYT------HWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFA  155 (284)
T ss_dssp             HHHHHHHHHHHHH------HHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH------HhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeecccc
Confidence            9999999999998      56899999999998743  334444443              3578999999999999988


Q ss_pred             Hhhhc-----CCCCCeEEEEcCCcccccccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCC
Q 017812          186 PLLKN-----SPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRH  260 (365)
Q Consensus       186 ~~~~~-----~~~~g~iV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~g  260 (365)
                      +.+..     ....++||+++|..+.                    .+.+++.+|++||+|+++|+++|++|++   +.|
T Consensus       156 ~~~~~~~~~~~~~~~~ii~~~s~~~~--------------------~~~~~~~~Y~asKaal~~lt~~lA~el~---~~g  212 (284)
T d1e7wa_         156 HRVAGTPAKHRGTNYSIINMVDAMTN--------------------QPLLGYTIYTMAKGALEGLTRSAALELA---PLQ  212 (284)
T ss_dssp             HHHHTSCGGGSCSCEEEEEECCTTTT--------------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGT
T ss_pred             chhhhhHHHhcCCCCccccccccccc--------------------CCccceeeeccccccchhhhHHHHHHhC---Ccc
Confidence            86532     2236799999999987                    7888999999999999999999999998   899


Q ss_pred             eEEEEecCCcccCCccccchhHHHHHHHHHHHH-hcCCCCHHHHHHHHHHHhcCCC---CCcccEEeCCCCccc
Q 017812          261 VSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL-LGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRTV  330 (365)
Q Consensus       261 i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~-~~~~~~p~e~A~~i~~~~l~~~---~~~G~~~~~~~g~~~  330 (365)
                      |+||+|+||++.+.  ...++.. ........| .+|+.+|+|+|++++  ||+++   ..+|+.+.+|+|..+
T Consensus       213 IrvN~I~PG~t~~~--~~~~~~~-~~~~~~~~pl~~R~~~peeiA~~v~--fL~S~~s~~itG~~i~VDGG~sl  281 (284)
T d1e7wa_         213 IRVNGVGPGLSVLV--DDMPPAV-WEGHRSKVPLYQRDSSAAEVSDVVI--FLCSSKAKYITGTCVKVDGGYSL  281 (284)
T ss_dssp             EEEEEEEESSBCCG--GGSCHHH-HHHHHTTCTTTTSCBCHHHHHHHHH--HHHSGGGTTCCSCEEEESTTGGG
T ss_pred             cccccccccccccc--ccCCHHH-HHHHHhcCCCCCCCCCHHHHHHHHH--HHhCchhcCccCCeEEECcChhc
Confidence            99999999986543  3333322 122222335 489999999999999  44444   468999999999865

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=3.9e-38  Score=278.51  Aligned_cols=229  Identities=21%  Similarity=0.248  Sum_probs=189.1

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhc
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  138 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~  138 (365)
                      +|++||||||+|||+++|++|+++|++|++++|+++              +.+....++|+++...+..+.......   
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~--------------~~~~~~~~~d~~~~~~~~~~~~~~~~~---   63 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE--------------GEDLIYVEGDVTREEDVRRAVARAQEE---   63 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC--------------SSSSEEEECCTTCHHHHHHHHHHHHHH---
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcc--------------cccceEeeccccchhhhHHHHHhhhcc---
Confidence            489999999999999999999999999999999865              346778999999999998888877652   


Q ss_pred             cCCCCCeeEEEecCCcc------cCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcC-----CCCCeEEEEcCCcccc
Q 017812          139 SDMHSSIQLLINNAGIL------ATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNS-----PVPSRIVNVTSFTHRN  207 (365)
Q Consensus       139 ~~~~~~id~lv~nAG~~------~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~-----~~~g~iV~vsS~~~~~  207 (365)
                          ...+.+++++++.      ......+.+.+++++++|+.+++.+++.+.+.+...     ++.|+||++||.++. 
T Consensus        64 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~-  138 (241)
T d1uaya_          64 ----APLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAF-  138 (241)
T ss_dssp             ----SCEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHH-
T ss_pred             ----ccccchhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhc-
Confidence                3466667777654      223456788999999999999999999999985432     126999999999998 


Q ss_pred             cccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHH
Q 017812          208 VFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMA  287 (365)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~  287 (365)
                                         .+.++..+|++||+|+++|+++|++|++   ++|||||+|+||+|+|++............
T Consensus       139 -------------------~~~~~~~~Y~asKaal~~lt~~lA~ela---~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~  196 (241)
T d1uaya_         139 -------------------EGQIGQAAYAASKGGVVALTLPAARELA---GWGIRVVTVAPGLFDTPLLQGLPEKAKASL  196 (241)
T ss_dssp             -------------------HCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEECSCSSHHHHTSCHHHHHHH
T ss_pred             -------------------cCCCCchhhHHHHHHHHHHHHHHHHHHh---hcCCceeeecCCcccccccchhhhhHHHHH
Confidence                               7889999999999999999999999998   899999999999999999877654332222


Q ss_pred             HHHHHHhcCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccccC
Q 017812          288 FTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNS  332 (365)
Q Consensus       288 ~~~~~~~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~~~  332 (365)
                      .....+.+|+.+|||+|+.+++++. +...+|+.+.+|+|..+.|
T Consensus       197 ~~~~~~~~R~g~pedvA~~v~fL~s-~~~iTG~~i~VDGG~~m~p  240 (241)
T d1uaya_         197 AAQVPFPPRLGRPEEYAALVLHILE-NPMLNGEVVRLDGALRMAP  240 (241)
T ss_dssp             HTTCCSSCSCCCHHHHHHHHHHHHH-CTTCCSCEEEESTTCCCCC
T ss_pred             HhcCCCCCCCcCHHHHHHHHHHHHh-CCCCCCCEEEECCcccCCC
Confidence            2222234789999999999997664 4578999999999987654

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=2.6e-38  Score=292.12  Aligned_cols=238  Identities=14%  Similarity=0.155  Sum_probs=189.6

Q ss_pred             CCEEEEec--CCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCC----------CceEEE-----------
Q 017812           59 RPVCIVTG--ATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKD----------ARLEAF-----------  115 (365)
Q Consensus        59 ~k~vlITG--assGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~----------~~~~~~-----------  115 (365)
                      +|++||||  +++|||+++|+.|+++|++|++++++............++...          ......           
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND   81 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGGG
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhcc
Confidence            79999999  6689999999999999999999999887655555444332211          011222           


Q ss_pred             ---------EecCCChhhHHHHHHHHHHHHhccCCCCCeeEEEecCCccc----CCCCCCHHHHhHhHHHHhHHHHHHHH
Q 017812          116 ---------QVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILA----TSSRLTPEGYDQMMSTNYIGAFFLTK  182 (365)
Q Consensus       116 ---------~~Dls~~~~v~~~~~~~~~~~~~~~~~~~id~lv~nAG~~~----~~~~~~~~~~~~~~~vN~~~~~~l~~  182 (365)
                               .+|+++.++++++++++.+      .+++||+||||||...    +..+.+.++|++++++|++|.+.++|
T Consensus        82 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~------~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k  155 (329)
T d1uh5a_          82 IDEETKNNKRYNMLQNYTIEDVANLIHQ------KYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCK  155 (329)
T ss_dssp             CCHHHHTSHHHHTCCCCSHHHHHHHHHH------HHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             cchhhhhhhhhhhhhHHHHHHHHHHHHH------HhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHH
Confidence                     2477788999999999998      5689999999999753    45578999999999999999999999


Q ss_pred             HHhHhhhcCCCCCeEEEEcCCcccccccccCCCccccccccccCCCCCh-hhhhhhhHHHHHHHHHHHHHHhCCCCC-CC
Q 017812          183 LLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPC-ARIYEYSKLCLLIFSYELHRNLGLDKS-RH  260 (365)
Q Consensus       183 ~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~sK~a~~~~~~~la~e~~~~~~-~g  260 (365)
                      +++|+|++   .|+||++||.++.                    .+.|+ ...|++||+|+++|+++|+.|++   + +|
T Consensus       156 ~~~~~m~~---~GsIv~iss~~~~--------------------~~~p~y~~~y~asKaal~~ltr~lA~Ela---~~~g  209 (329)
T d1uh5a_         156 YFVNIMKP---QSSIISLTYHASQ--------------------KVVPGYGGGMSSAKAALESDTRVLAYHLG---RNYN  209 (329)
T ss_dssp             HHGGGEEE---EEEEEEEECGGGT--------------------SCCTTCTTTHHHHHHHHHHHHHHHHHHHH---HHHC
T ss_pred             HHHhhccc---ccccccceeehhc--------------------ccccccchhhhhhhccccccchhhHHHHh---cccC
Confidence            99999965   4899999999887                    66665 56799999999999999999997   5 59


Q ss_pred             eEEEEecCCcccCCccccchh--------------------------------------------HHHHHHHHHHHHhcC
Q 017812          261 VSVIAADPGVVKTNIMREVPS--------------------------------------------FLSLMAFTVLKLLGL  296 (365)
Q Consensus       261 i~v~~v~PG~v~T~~~~~~~~--------------------------------------------~~~~~~~~~~~~~~~  296 (365)
                      ||||+|+||+|+|++.+.++.                                            ...........|++|
T Consensus       210 IRVNaI~PG~i~T~a~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R  289 (329)
T d1uh5a_         210 IRINTISAGPLKSRAATAINKLNNTYENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQ  289 (329)
T ss_dssp             CEEEEEEECCCCCTTGGGCC------------------------------------------CHHHHHHHHHHHHSSSCS
T ss_pred             cEEEEEecCcccchhhhcccchhhhhhhhhhhhhccccccccccccccccccchhhhhhhcccchHHHHHHHhccCCCCC
Confidence            999999999999965443221                                            111122334458899


Q ss_pred             CCCHHHHHHHHHHHhcCCC---CCcccEEeCCCCccc
Q 017812          297 LQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRTV  330 (365)
Q Consensus       297 ~~~p~e~A~~i~~~~l~~~---~~~G~~~~~~~g~~~  330 (365)
                      +.+|||+|++++  ||+|+   ..+|+.+.+|+|-.+
T Consensus       290 ~~~pedvA~~v~--fLaSd~s~~iTGq~i~VDGG~~~  324 (329)
T d1uh5a_         290 KLLSTDIGSVAS--FLLSRESRAITGQTIYVDNGLNI  324 (329)
T ss_dssp             CCCHHHHHHHHH--HHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CcCHHHHHHHHH--HHhCchhCCccCCeEEECCCccc
Confidence            999999999999  56565   568999999999754

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.1e-37  Score=274.58  Aligned_cols=216  Identities=14%  Similarity=0.057  Sum_probs=177.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      +||+||||||++|||+++|++|+++|++|+++++++...            ......+.+|.++.++++.+.+.+.+.+ 
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-   67 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE------------ASASVIVKMTDSFTEQADQVTAEVGKLL-   67 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTT------------SSEEEECCCCSCHHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc------------ccccceeecccCcHHHHHHHHHHHHHHh-
Confidence            589999999999999999999999999999999976431            2355677889998999988888887765 


Q ss_pred             ccCCCCCeeEEEecCCccc---CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017812          138 DSDMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  214 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~  214 (365)
                         ..++||+||||||...   +..+.+.+.|++++++|+.++++++++++|+|++   .|+||++||.++.        
T Consensus        68 ---~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~---~G~Iv~isS~~~~--------  133 (236)
T d1dhra_          68 ---GDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE---GGLLTLAGAKAAL--------  133 (236)
T ss_dssp             ---TTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCGGGG--------
T ss_pred             ---CCCCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhccc---ccceeEEccHHHc--------
Confidence               3468999999999753   2345567899999999999999999999999975   4899999999998        


Q ss_pred             CccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHh
Q 017812          215 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLL  294 (365)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  294 (365)
                                  .+.++..+|++||+|+++|+++|+.|++. .++||+||+|+||+|+|+|.+...+.         ...
T Consensus       134 ------------~~~~~~~~Y~asKaal~~lt~~la~El~~-~~~gI~vn~v~PG~v~T~~~~~~~~~---------~~~  191 (236)
T d1dhra_         134 ------------DGTPGMIGYGMAKGAVHQLCQSLAGKNSG-MPSGAAAIAVLPVTLDTPMNRKSMPE---------ADF  191 (236)
T ss_dssp             ------------SCCTTBHHHHHHHHHHHHHHHHHTSTTSS-CCTTCEEEEEEESCEECHHHHHHSTT---------SCG
T ss_pred             ------------CCccCCcccHHHHHHHHHHHHHHHHHhcc-CCCcEEEEEEEeccCcCCcchhhCcc---------chh
Confidence                        88899999999999999999999999962 13799999999999999987542211         122


Q ss_pred             cCCCCHHHHHHHHHHHhcCCC-CCcccEE
Q 017812          295 GLLQSPEKGINSVLDAALAPP-ETSGVYF  322 (365)
Q Consensus       295 ~~~~~p~e~A~~i~~~~l~~~-~~~G~~~  322 (365)
                      .++.+|+++|+.+.+++.... ..+|..+
T Consensus       192 ~~~~~pe~va~~~~~l~s~~~~~i~G~~i  220 (236)
T d1dhra_         192 SSWTPLEFLVETFHDWITGNKRPNSGSLI  220 (236)
T ss_dssp             GGSEEHHHHHHHHHHHHTTTTCCCTTCEE
T ss_pred             hcCCCHHHHHHHHHHHhCCCccCCCCCeE
Confidence            356789999999996554332 4578755

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=7.4e-37  Score=278.70  Aligned_cols=243  Identities=14%  Similarity=0.124  Sum_probs=189.5

Q ss_pred             CCCCCEEEEecCCC--hHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCC---------C-ceEEEEec-----
Q 017812           56 GIKRPVCIVTGATS--GLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKD---------A-RLEAFQVD-----  118 (365)
Q Consensus        56 ~~~~k~vlITGass--GIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~---------~-~~~~~~~D-----  118 (365)
                      +|+||++|||||+|  |||+++|++|+++|++|++++|+.................         . .-....+|     
T Consensus         5 ~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (297)
T d1d7oa_           5 DLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDN   84 (297)
T ss_dssp             CCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCS
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhccc
Confidence            58999999999876  9999999999999999999999865443333332211100         0 11233343     


Q ss_pred             ---------------CCChhhHHHHHHHHHHHHhccCCCCCeeEEEecCCcc----cCCCCCCHHHHhHhHHHHhHHHHH
Q 017812          119 ---------------LSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL----ATSSRLTPEGYDQMMSTNYIGAFF  179 (365)
Q Consensus       119 ---------------ls~~~~v~~~~~~~~~~~~~~~~~~~id~lv~nAG~~----~~~~~~~~~~~~~~~~vN~~~~~~  179 (365)
                                     .++..+++++++++.+      .+++||+||||||..    .+..+.+.++|++++++|+.+++.
T Consensus        85 ~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~------~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~  158 (297)
T d1d7oa_          85 PEDVPEDVKANKRYAGSSNWTVQEAAECVRQ------DFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVS  158 (297)
T ss_dssp             GGGSCHHHHTSHHHHHCCCCSHHHHHHHHHH------HHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHH
T ss_pred             cccchhhhhhhhhhhhccHHHHHHHHHHHHH------HhCCCcccccccccccccccchhhhhcccccccccchhhhhhh
Confidence                           3566778899999988      568999999999974    345678999999999999999999


Q ss_pred             HHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCC
Q 017812          180 LTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSR  259 (365)
Q Consensus       180 l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~  259 (365)
                      ++++++|+|.++   |++++++|.+..                   ....+....|+++|+++..+++.++.|++  .+.
T Consensus       159 ~~~~~~~~~~~~---g~~~~~~~~~~~-------------------~~~~~~~~~y~~aKaa~~~l~~~~a~e~~--~~~  214 (297)
T d1d7oa_         159 LLSHFLPIMNPG---GASISLTYIASE-------------------RIIPGYGGGMSSAKAALESDTRVLAFEAG--RKQ  214 (297)
T ss_dssp             HHHHHGGGEEEE---EEEEEEECGGGT-------------------SCCTTCTTTHHHHHHHHHHHHHHHHHHHH--HHH
T ss_pred             hhhHHHHHhhcC---Ccceeeeehhhc-------------------ccccccccceecccccccccccccchhcc--ccc
Confidence            999999999874   577777776654                   13456677899999999999999999995  146


Q ss_pred             CeEEEEecCCcccCCccccchhHHH-HHHHHHHHHhcCCCCHHHHHHHHHHHhcCCC---CCcccEEeCCCCccc
Q 017812          260 HVSVIAADPGVVKTNIMREVPSFLS-LMAFTVLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRTV  330 (365)
Q Consensus       260 gi~v~~v~PG~v~T~~~~~~~~~~~-~~~~~~~~~~~~~~~p~e~A~~i~~~~l~~~---~~~G~~~~~~~g~~~  330 (365)
                      |||||+|+||+++|++.+....... ........|++|+.+|||+|+.++  ||+++   ..+|+.+.+|+|...
T Consensus       215 gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~PlgR~~~peevA~~v~--fL~S~~a~~itGq~i~vDGG~s~  287 (297)
T d1d7oa_         215 NIRVNTISAGPLGSRAAKAIGFIDTMIEYSYNNAPIQKTLTADEVGNAAA--FLVSPLASAITGATIYVDNGLNS  287 (297)
T ss_dssp             CCEEEEEEECCCBCCCSSCCSHHHHHHHHHHHHSSSCCCBCHHHHHHHHH--HHTSGGGTTCCSCEEEESTTGGG
T ss_pred             eEEecccccccccchhhhhccCCHHHHHHHHhCCCCCCCCCHHHHHHHHH--HHhCchhcCCcCceEEECcCHhh
Confidence            9999999999999999987543322 233444568999999999999999  66665   458999999999654

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=100.00  E-value=6.3e-36  Score=268.48  Aligned_cols=238  Identities=15%  Similarity=0.180  Sum_probs=189.3

Q ss_pred             CCCCEEEEecC--CChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           57 IKRPVCIVTGA--TSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        57 ~~~k~vlITGa--ssGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      |+||++|||||  ++|||+++|++|+++|++|++++|+.+++.+   ++.+.. +.+...++||+++++++.++++.+.+
T Consensus         4 l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~---~~~~~~-~~~~~~~~~dv~~~~~~~~~~~~v~~   79 (268)
T d2h7ma1           4 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQ---RITDRL-PAKAPLLELDVQNEEHLASLAGRVTE   79 (268)
T ss_dssp             TTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHH---HHHTTS-SSCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHH---HHHHHc-CCceeeEeeecccccccccccchhhh
Confidence            78999999994  6799999999999999999999999876533   232332 45778999999999999999999988


Q ss_pred             HHhccCCCCCeeEEEecCCccc-------CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccc
Q 017812          135 WLLDSDMHSSIQLLINNAGILA-------TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRN  207 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~-------~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~  207 (365)
                      .+.   ..+++|++|||||+..       +..+.+.+.+...+.+|+.+.+...+.+.+.+..    +.+++++|.... 
T Consensus        80 ~~~---~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~i~~~s~~~~-  151 (268)
T d2h7ma1          80 AIG---AGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP----GGSIVGMDFDPS-  151 (268)
T ss_dssp             HHC---TTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE----EEEEEEEECCCS-
T ss_pred             ccc---cCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhccc----cccccccccccc-
Confidence            664   3578999999999752       2235678999999999999999999999887644    345555555555 


Q ss_pred             cccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchh------
Q 017812          208 VFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPS------  281 (365)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~------  281 (365)
                                         .+.|....|++||+|+.+|++++++|++   +.||+||+|+||+|.|++......      
T Consensus       152 -------------------~~~p~~~~y~~sK~a~~~ltr~lA~e~~---~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~  209 (268)
T d2h7ma1         152 -------------------RAMPAYNWMTVAKSALESVNRFVAREAG---KYGVRSNLVAAGPIRTLAMSAIVGGALGEE  209 (268)
T ss_dssp             -------------------SCCTTTHHHHHHHHHHHHHHHHHHHHHH---TTTCEEEEEEECCCCCHHHHHHHTTTTCHH
T ss_pred             -------------------ccCcccchhhccccchhhccccchhhhh---ccCCcceEEecCCCCChhhhhhccchhhhh
Confidence                               6778889999999999999999999998   899999999999999998753221      


Q ss_pred             HHH-----HHHHHHHHHhcC-CCCHHHHHHHHHHHhcCCC---CCcccEEeCCCCccc
Q 017812          282 FLS-----LMAFTVLKLLGL-LQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRTV  330 (365)
Q Consensus       282 ~~~-----~~~~~~~~~~~~-~~~p~e~A~~i~~~~l~~~---~~~G~~~~~~~g~~~  330 (365)
                      ...     ........|++| +.+|+|+|+.++  +|+++   ..+|+.+.+|+|...
T Consensus       210 ~~~~~~~~~~~~~~~~pl~rr~~~p~dva~~v~--fL~Sd~a~~iTG~~i~vDGG~~~  265 (268)
T d2h7ma1         210 AGAQIQLLEEGWDQRAPIGWNMKDATPVAKTVC--ALLSDWLPATTGDIIYADGGAHT  265 (268)
T ss_dssp             HHHHHHHHHHHHHHHCTTCCCTTCCHHHHHHHH--HHHSSSCTTCCSEEEEESTTGGG
T ss_pred             hccchHHHHHHHHhcCCCCCCCCCHHHHHHHHH--HHhCchhcCccCCEEEECcCccc
Confidence            010     111222245554 899999999999  45455   458999999999754

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=2.2e-36  Score=266.20  Aligned_cols=216  Identities=15%  Similarity=0.042  Sum_probs=175.4

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhcc
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  139 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~  139 (365)
                      +.||||||++|||+++|++|+++|++|++++|+++..            ......+.+|..+.++.....+.+...+   
T Consensus         3 gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~---   67 (235)
T d1ooea_           3 GKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQ------------ADSNILVDGNKNWTEQEQSILEQTASSL---   67 (235)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTT------------SSEEEECCTTSCHHHHHHHHHHHHHHHH---
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhc------------ccccceeccccCchhHHHHHHHHHHHHh---
Confidence            4579999999999999999999999999999987531            2344566788888888887777777655   


Q ss_pred             CCCCCeeEEEecCCccc---CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017812          140 DMHSSIQLLINNAGILA---TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  216 (365)
Q Consensus       140 ~~~~~id~lv~nAG~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~  216 (365)
                       .+++||+||||||+..   +..+.+.+.++.++++|+.++++++++++|+|++   .|+||++||.++.          
T Consensus        68 -~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~---~g~Iv~isS~~~~----------  133 (235)
T d1ooea_          68 -QGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP---GGLLQLTGAAAAM----------  133 (235)
T ss_dssp             -TTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCGGGG----------
T ss_pred             -cCCCeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhccccccc---ceEEEEeccHHhc----------
Confidence             4689999999999753   2334456889999999999999999999999976   4899999999988          


Q ss_pred             cccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHhcC
Q 017812          217 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLLGL  296 (365)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  296 (365)
                                .+.+++.+|++||+|+++|+++|+.|++.. +.+|+|++|+||+++|++.+...+..         ...+
T Consensus       134 ----------~~~~~~~~Y~asKaal~~l~~~la~e~~~~-~~~i~v~~i~Pg~~~T~~~~~~~~~~---------~~~~  193 (235)
T d1ooea_         134 ----------GPTPSMIGYGMAKAAVHHLTSSLAAKDSGL-PDNSAVLTIMPVTLDTPMNRKWMPNA---------DHSS  193 (235)
T ss_dssp             ----------SCCTTBHHHHHHHHHHHHHHHHHHSTTSSC-CTTCEEEEEEESCBCCHHHHHHSTTC---------CGGG
T ss_pred             ----------CCcccccchHHHHHHHHHHHHHHHHHhccC-CCceEEEEEecCcCcCcchhhhCcCC---------cccc
Confidence                      888999999999999999999999999621 47999999999999999876432111         1235


Q ss_pred             CCCHHHHHHHHHHHhcCCC--CCcccEEeC
Q 017812          297 LQSPEKGINSVLDAALAPP--ETSGVYFFG  324 (365)
Q Consensus       297 ~~~p~e~A~~i~~~~l~~~--~~~G~~~~~  324 (365)
                      +.+|+++|+.++..+..+.  ..+|..+.+
T Consensus       194 ~~~~~~va~~~~~~l~~~~~~~~tG~~i~v  223 (235)
T d1ooea_         194 WTPLSFISEHLLKWTTETSSRPSSGALLKI  223 (235)
T ss_dssp             CBCHHHHHHHHHHHHHCGGGCCCTTCEEEE
T ss_pred             CCCHHHHHHHHHHHhcCccccCCCceEEEE
Confidence            6799999999885444432  468887754

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=100.00  E-value=2.4e-35  Score=264.31  Aligned_cols=236  Identities=18%  Similarity=0.210  Sum_probs=185.8

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchh-HHHHHHHHHhhcCCCceEEEEecCCC----hhhHHHHHHHHHH
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHL-LSETMADITSRNKDARLEAFQVDLSS----FQSVLKFKDSLQQ  134 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~Dls~----~~~v~~~~~~~~~  134 (365)
                      .++||||||+|||+++|++|+++|++|++++|+.++ .+++.+++.+.. +.+....++|..+    .+.++++++++.+
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAAR-AGSAVLCKGDLSLSSSLLDCCEDIIDCSFR   80 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSSSTTHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhc-CCceEEEecccccchhHHHHHHHHHHHHHH
Confidence            589999999999999999999999999999998655 567788887776 3466777766654    4556667777776


Q ss_pred             HHhccCCCCCeeEEEecCCcccCCC-------------CCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCC----CCCeE
Q 017812          135 WLLDSDMHSSIQLLINNAGILATSS-------------RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP----VPSRI  197 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~~~~-------------~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~----~~g~i  197 (365)
                            ++++||+||||||+..+..             +.....+...+.+|+.+++...+...+.+....    ..+.+
T Consensus        81 ------~~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (266)
T d1mxha_          81 ------AFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSV  154 (266)
T ss_dssp             ------HHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEE
T ss_pred             ------HhCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccc
Confidence                  5588999999999864322             123455778899999999999999988876532    25788


Q ss_pred             EEEcCCcccccccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccc
Q 017812          198 VNVTSFTHRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMR  277 (365)
Q Consensus       198 V~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~  277 (365)
                      ++++|..+.                    .+.+++.+|++||+|+++|++++++|++   +.|||||+|+||+++|++..
T Consensus       155 ~~~~~~~~~--------------------~~~~~~~~Y~asKaal~~lt~~lA~e~~---~~gIrVN~I~PG~i~t~~~~  211 (266)
T d1mxha_         155 VNLCDAMTD--------------------LPLPGFCVYTMAKHALGGLTRAAALELA---PRHIRVNAVAPGLSLLPPAM  211 (266)
T ss_dssp             EEECCGGGG--------------------SCCTTCHHHHHHHHHHHHHHHHHHHHHG---GGTEEEEEEEESSBSCCSSS
T ss_pred             hhhhhcccc--------------------ccCcchhhhhhhHHHHhhhHHHHHHHhC---ccCcEEEEeccCcEeccccC
Confidence            899998887                    8889999999999999999999999998   89999999999999999765


Q ss_pred             cchhHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHhcCCC---CCcccEEeCCCCccc
Q 017812          278 EVPSFLSLMAFTVLKLLGL-LQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRTV  330 (365)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~-~~~p~e~A~~i~~~~l~~~---~~~G~~~~~~~g~~~  330 (365)
                      ....   ........|++| +.+|||+|++++  +|+++   ..+|+.+.+|+|..+
T Consensus       212 ~~~~---~~~~~~~~pl~r~~~~peeva~~v~--fL~s~~s~~itG~~i~vDGG~~l  263 (266)
T d1mxha_         212 PQET---QEEYRRKVPLGQSEASAAQIADAIA--FLVSKDAGYITGTTLKVDGGLIL  263 (266)
T ss_dssp             CHHH---HHHHHTTCTTTSCCBCHHHHHHHHH--HHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CHHH---HHHHHhcCCCCCCCCCHHHHHHHHH--HHhCchhCCccCCeEEECccHhh
Confidence            4221   122233346655 479999999999  55554   469999999999765

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=2e-32  Score=243.95  Aligned_cols=235  Identities=18%  Similarity=0.185  Sum_probs=164.7

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhcc
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  139 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~  139 (365)
                      |+||||||++|||+++|++|+++|++|++++|+.++                   ..+|+++.+..+....++...    
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~-------------------~~~d~~~~~~~~~~~~~~~~~----   58 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE-------------------VIADLSTAEGRKQAIADVLAK----   58 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS-------------------EECCTTSHHHHHHHHHHHHTT----
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH-------------------HHHHhcCHHHHHHHHHHHHHH----
Confidence            799999999999999999999999999999997542                   357899988887766655431    


Q ss_pred             CCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcccc
Q 017812          140 DMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETIT  219 (365)
Q Consensus       140 ~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~~~  219 (365)
                       ..+.+|++|||||+...     .+.++....+|..+...+.+...|.+.+.. ...+.++++.................
T Consensus        59 -~~~~id~lv~~Ag~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (257)
T d1fjha_          59 -CSKGMDGLVLCAGLGPQ-----TKVLGNVVSVNYFGATELMDAFLPALKKGH-QPAAVVISSVASAHLAFDKNPLALAL  131 (257)
T ss_dssp             -CTTCCSEEEECCCCCTT-----CSSHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGSSCGGGCTTHHHH
T ss_pred             -hCCCCcEEEEcCCCCCc-----HHHHHHHHHHHHHHHHHHHHHhhhhhhhhc-cCcceeeeeccccchhhhhhhhhhhc
Confidence             44679999999997533     345778899999999999999999998876 56777777655432111111000000


Q ss_pred             --cc------ccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHH--HH
Q 017812          220 --GK------FFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMA--FT  289 (365)
Q Consensus       220 --~~------~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~--~~  289 (365)
                        +.      ........++..+|++||+|+++|+|+|+.|++   ++|||||+|+||+|+|++.+..........  ..
T Consensus       132 ~~g~~~~i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~---~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~  208 (257)
T d1fjha_         132 EAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWG---EAGVRLNTIAPGATETPLLQAGLQDPRYGESIAK  208 (257)
T ss_dssp             HHTCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHH---HTTCEEEEEEECC---------------------
T ss_pred             cCCcEEEEeeehhccCCCcchHHHHHHhhhhhccccccccccc---cccccccccccCCcCChhHHhhcCCHHHHHHHHh
Confidence              00      000012344567899999999999999999998   899999999999999999875432221111  11


Q ss_pred             HHHHhcCCCCHHHHHHHHHHHhcCCC---CCcccEEeCCCCcc
Q 017812          290 VLKLLGLLQSPEKGINSVLDAALAPP---ETSGVYFFGGKGRT  329 (365)
Q Consensus       290 ~~~~~~~~~~p~e~A~~i~~~~l~~~---~~~G~~~~~~~g~~  329 (365)
                      ...|++|+.+|+|+|+.++  ||+++   ..+|+.+.+|+|-.
T Consensus       209 ~~~PlgR~g~p~eva~~v~--fL~S~~s~~itG~~i~vDGG~t  249 (257)
T d1fjha_         209 FVPPMGRRAEPSEMASVIA--FLMSPAASYVHGAQIVIDGGID  249 (257)
T ss_dssp             CCCSTTSCCCTHHHHHHHH--HHTSGGGTTCCSCEEEESTTHH
T ss_pred             cCCCCCCCcCHHHHHHHHH--HHhCchhCCccCceEEeCCCcc
Confidence            1248899999999999999  66665   46899999999953

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.97  E-value=4.4e-31  Score=235.55  Aligned_cols=208  Identities=23%  Similarity=0.237  Sum_probs=163.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCc---hhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSS---HLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~---~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      ++++|||||++|||+++|++|+++|+ +|++++|+.   +..++..+++.+.  +.++.++.||++|.++++++++.+.+
T Consensus         9 ~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~--g~~v~~~~~Dv~d~~~~~~~~~~i~~   86 (259)
T d2fr1a1           9 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEAL--GARTTVAACDVTDRESVRELLGGIGD   86 (259)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred             cCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhc--cccccccccccchHHHHHHhhccccc
Confidence            57999999999999999999999999 799999974   4566777777655  57899999999999999999888754


Q ss_pred             HHhccCCCCCeeEEEecCCccc--CCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc
Q 017812          135 WLLDSDMHSSIQLLINNAGILA--TSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ  212 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~  212 (365)
                             .+++|.+|||||+..  +..+.+.++++.++++|+.|++++.+.+.+    .+ .++||++||.++.      
T Consensus        87 -------~~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~----~~-~~~iv~~SS~a~~------  148 (259)
T d2fr1a1          87 -------DVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRE----LD-LTAFVLFSSFASA------  148 (259)
T ss_dssp             -------TSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTT----SC-CSEEEEEEEHHHH------
T ss_pred             -------cccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhc----cC-CceEeeecchhhc------
Confidence                   468999999999874  456789999999999999999998876543    22 5899999999998      


Q ss_pred             CCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHH
Q 017812          213 VNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLK  292 (365)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~  292 (365)
                                    .+.++++.|+++|++++.|++.++       ..|+++++|+||.+.++.....+.. ...     .
T Consensus       149 --------------~g~~~~~~YaAaka~l~~la~~~~-------~~Gi~v~~I~pg~~~~~g~~~~~~~-~~~-----~  201 (259)
T d2fr1a1         149 --------------FGAPGLGGYAPGNAYLDGLAQQRR-------SDGLPATAVAWGTWAGSGMAEGPVA-DRF-----R  201 (259)
T ss_dssp             --------------TCCTTCTTTHHHHHHHHHHHHHHH-------HTTCCCEEEEECCBC-------------C-----T
T ss_pred             --------------cCCcccHHHHHHHHhHHHHHHHHH-------hCCCCEEECCCCcccCCccccchHH-HHH-----H
Confidence                          889999999999999998887765       4689999999998865432211100 000     0


Q ss_pred             Hhc-CCCCHHHHHHHHHHHhcC
Q 017812          293 LLG-LLQSPEKGINSVLDAALA  313 (365)
Q Consensus       293 ~~~-~~~~p~e~A~~i~~~~l~  313 (365)
                      ..+ ...+|+++++.+.+++..
T Consensus       202 ~~G~~~~~~~~~~~~l~~~l~~  223 (259)
T d2fr1a1         202 RHGVIEMPPETACRALQNALDR  223 (259)
T ss_dssp             TTTEECBCHHHHHHHHHHHHHT
T ss_pred             hcCCCCCCHHHHHHHHHHHHhC
Confidence            011 235899999998865544

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.85  E-value=5.7e-20  Score=170.46  Aligned_cols=236  Identities=12%  Similarity=0.050  Sum_probs=155.2

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEecCc-----hhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS-----HLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~-----~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      |+||||||||.||.+++++|.++|++|++++|..     ++++.+..+....  ..++.++++|++|.+++++.++..  
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~--   77 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTC--NPKFHLHYGDLSDTSNLTRILREV--   77 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC-----------------------CCEEECCCCSSCHHHHHHHHHHH--
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhc--CCCeEEEEeecCCHHHHHHHHhcc--
Confidence            7899999999999999999999999999999954     3333333332222  457899999999999999887753  


Q ss_pred             HHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017812          135 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  214 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~  214 (365)
                               .+|+++|.|+......  +.++.+..+++|+.|+.++++++...-.+.  ..|+|++||.+.+......  
T Consensus        78 ---------~~d~v~h~aa~~~~~~--~~~~~~~~~~~Nv~gt~nllea~~~~~~~~--~~r~i~~SS~~vYG~~~~~--  142 (357)
T d1db3a_          78 ---------QPDEVYNLGAMSHVAV--SFESPEYTADVDAMGTLRLLEAIRFLGLEK--KTRFYQASTSELYGLVQEI--  142 (357)
T ss_dssp             ---------CCSEEEECCCCCTTTT--TTSCHHHHHHHHTHHHHHHHHHHHHTTCTT--TCEEEEEEEGGGGTTCCSS--
T ss_pred             ---------CCCEEEEeecccccch--hhhCHHHHHHHHHHHHHHHHHHHHHhCCCC--CcEEEEEEchhhhCCCCCC--
Confidence                     3899999999864322  234556789999999999999986553332  3689999997765322111  


Q ss_pred             CccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHh
Q 017812          215 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLL  294 (365)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  294 (365)
                             .+.+..+..+...|+.||.+.+.+++.+++.+      ++.++.++|+.|-.|....................
T Consensus       143 -------~~~E~~~~~P~~~Y~~sK~~~E~~~~~~~~~~------~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~  209 (357)
T d1db3a_         143 -------PQKETTPFYPRSPYAVAKLYAYWITVNYRESY------GMYACNGILFNHESPRRGETFVTRKITRAIANIAQ  209 (357)
T ss_dssp             -------SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH------CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHT
T ss_pred             -------CcCCCCCCCCCChHHHHHHHHHHHHHHHHHHh------CCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHh
Confidence                   11122444556789999999999999988764      58889999999988754322111111111111000


Q ss_pred             --------c------CCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017812          295 --------G------LLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  330 (365)
Q Consensus       295 --------~------~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~  330 (365)
                              +      -+..++|+|++++.+ +.. ...+. |....|++.
T Consensus       210 ~~~~~~~~g~~~~~r~~~~v~D~~~a~~~~-~~~-~~~~~-yni~sg~~~  256 (357)
T d1db3a_         210 GLESCLYLGNMDSLRDWGHAKDYVKMQWMM-LQQ-EQPED-FVIATGVQY  256 (357)
T ss_dssp             TSCCCEEESCTTCEECCEEHHHHHHHHHHT-TSS-SSCCC-EEECCCCCE
T ss_pred             CCCceEEECCCCeeecceeechHHHHHHHH-HhC-CCCCe-EEECCCCce
Confidence                    1      245799999999843 332 33344 444555554

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.83  E-value=7.1e-22  Score=167.04  Aligned_cols=154  Identities=13%  Similarity=0.082  Sum_probs=117.1

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.++++++.+++....   ++....+|++|.+++++++     
T Consensus        19 ~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~~~-----   90 (191)
T d1luaa1          19 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF---KVNVTAAETADDASRAEAV-----   90 (191)
T ss_dssp             SCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH---TCCCEEEECCSHHHHHHHT-----
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhcc---chhhhhhhcccHHHHHHHh-----
Confidence            46899999999999999999999999999999999999999999999987753   4567889999998876643     


Q ss_pred             HHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017812          135 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  214 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~  214 (365)
                              +++|+||||||+.  ....+.+.|+..+++|+++.++....+.+.+....  .....+++.....       
T Consensus        91 --------~~iDilin~Ag~g--~~~~~~e~~~~~~~~nv~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g-------  151 (191)
T d1luaa1          91 --------KGAHFVFTAGAIG--LELLPQAAWQNESSIEIVADYNAQPPLGIGGIDAT--DKGKEYGGKRAFG-------  151 (191)
T ss_dssp             --------TTCSEEEECCCTT--CCCBCHHHHHTCTTCCEEEECCCSSSCSBTTCCTT--CEEEEETTEEEEC-------
T ss_pred             --------cCcCeeeecCccc--cccCCHHHHHhhhcceeehhHhhHHHHHHHhhhhc--cCcEEecceEEEe-------
Confidence                    4699999999973  34568999999999999888876655544443322  2333333333220       


Q ss_pred             CccccccccccCCCCChhhhhhhhHHHHHHHHH
Q 017812          215 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSY  247 (365)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~  247 (365)
                                  ....+...|+++|+++..+++
T Consensus       152 ------------~~~~g~~~y~~sk~a~~~l~~  172 (191)
T d1luaa1         152 ------------ALGIGGLKLKLHRACIAKLFE  172 (191)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHTS
T ss_pred             ------------ccCcCcHHHHHHHHHHHHHHh
Confidence                        011234579999999887663

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.82  E-value=6.5e-19  Score=162.21  Aligned_cols=242  Identities=14%  Similarity=0.087  Sum_probs=162.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      +||+||||||+|.||.+++++|.++|++|+.+.|+.++.+.+...............+..|++|.+++.+++        
T Consensus        10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~--------   81 (342)
T d1y1pa1          10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVI--------   81 (342)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTT--------
T ss_pred             CcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhc--------
Confidence            499999999999999999999999999999999998877666555444443445566778999988766543        


Q ss_pred             ccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcc
Q 017812          138 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNET  217 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~  217 (365)
                           ..+|+++|+|+....  ..+   ....+.+|+.|+.++++.+...    +...++|++||.++............
T Consensus        82 -----~~~~~v~~~a~~~~~--~~~---~~~~~~~nv~gt~~ll~~~~~~----~~v~~~i~~SS~~~~~~~~~~~~~~~  147 (342)
T d1y1pa1          82 -----KGAAGVAHIASVVSF--SNK---YDEVVTPAIGGTLNALRAAAAT----PSVKRFVLTSSTVSALIPKPNVEGIY  147 (342)
T ss_dssp             -----TTCSEEEECCCCCSC--CSC---HHHHHHHHHHHHHHHHHHHHTC----TTCCEEEEECCGGGTCCCCTTCCCCE
T ss_pred             -----ccchhhhhhcccccc--ccc---ccccccchhhhHHHHHHhhhcc----cccccccccccceeeccCCCCCCCcc
Confidence                 348999999997532  222   3456788999999998887553    12469999999765433221111110


Q ss_pred             ccc-----------cccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc--hhHHH
Q 017812          218 ITG-----------KFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV--PSFLS  284 (365)
Q Consensus       218 ~~~-----------~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~--~~~~~  284 (365)
                      ...           ..+.+..+..+...|+.||.+.+.+++.++++.    ..++++.+++|+.+-.|.....  .....
T Consensus       148 ~~e~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~  223 (342)
T d1y1pa1         148 LDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDEN----KPHFTLNAVLPNYTIGTIFDPETQSGSTS  223 (342)
T ss_dssp             ECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHH----CCSSEEEEEEESEEECCCSCTTTCCCHHH
T ss_pred             ccccccccccccccccccccCCCCCcCcccchhHhHHHHHHHhhhhc----ccccccceecccceeCCCCCccccccchH
Confidence            000           012233566678899999999999999998876    4678899999998876643211  11111


Q ss_pred             HHHHHHH----------HHhcCCCCHHHHHHHHHHHhcCCCCCcccEEeCCC
Q 017812          285 LMAFTVL----------KLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGK  326 (365)
Q Consensus       285 ~~~~~~~----------~~~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~  326 (365)
                      .......          .....+..++|+|++++.++ ..+...|.+++..+
T Consensus       224 ~~~~~l~~g~~~~~~~~~~~~~~v~v~Dva~~~i~~l-~~~~~~g~~~~~~~  274 (342)
T d1y1pa1         224 GWMMSLFNGEVSPALALMPPQYYVSAVDIGLLHLGCL-VLPQIERRRVYGTA  274 (342)
T ss_dssp             HHHHHHHTTCCCHHHHTCCSEEEEEHHHHHHHHHHHH-HCTTCCSCEEEECC
T ss_pred             HHHHHHHcCCcCcccCCccceeeeeHHHHHHHHHHhh-cCccccceEEEEcC
Confidence            1000000          00011467899999988544 44556677776443

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.77  E-value=6.9e-17  Score=151.20  Aligned_cols=195  Identities=13%  Similarity=0.106  Sum_probs=136.4

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCc----------------hhHHHHHHHHHhhcCCCceEEEEecCCCh
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS----------------HLLSETMADITSRNKDARLEAFQVDLSSF  122 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~----------------~~~~~~~~~l~~~~~~~~~~~~~~Dls~~  122 (365)
                      |+.||||||||.||.+++++|+++|++|++++.-.                ....+......... +.++.++.+|++|.
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~Dl~d~   79 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALT-GKSIELYVGDICDF   79 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHH-CCCCEEEESCTTSH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhc-CCCcEEEEccCCCH
Confidence            67899999999999999999999999999987211                11122222222222 45789999999999


Q ss_pred             hhHHHHHHHHHHHHhccCCCCCeeEEEecCCcccCC-CCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEc
Q 017812          123 QSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATS-SRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVT  201 (365)
Q Consensus       123 ~~v~~~~~~~~~~~~~~~~~~~id~lv~nAG~~~~~-~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vs  201 (365)
                      +.++++++..           ++|+|+|.|+..... ...+++.....+.+|+.|+..+++++...-.    ..++++.|
T Consensus        80 ~~l~~~~~~~-----------~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~----~~~~i~~s  144 (393)
T d1i24a_          80 EFLAESFKSF-----------EPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGE----ECHLVKLG  144 (393)
T ss_dssp             HHHHHHHHHH-----------CCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCT----TCEEEEEC
T ss_pred             HHHHHHHHhh-----------cchheeccccccccccccccccccccccccccccccHHHHHHHHhcc----ccceeecc
Confidence            9999887753           499999999975432 3446677788999999999999998865432    24677777


Q ss_pred             CCcccccccccCCCcc----ccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCc
Q 017812          202 SFTHRNVFNAQVNNET----ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNI  275 (365)
Q Consensus       202 S~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~  275 (365)
                      |...+...........    ..........+..+.+.|+.||.+.+.+++.++++      .++.+.+++|+.+-.+-
T Consensus       145 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~------~~l~~~~lR~~~v~G~~  216 (393)
T d1i24a_         145 TMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA------WGIRATDLNQGVVYGVK  216 (393)
T ss_dssp             CGGGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHH------HCCEEEEEEECEEECSC
T ss_pred             ccccccccccccccccccccccccccccccccccccHHHHHhhhhcccccccccc------cceeeeecccccccCCC
Confidence            7765533222211110    01111111234556678999999999999988775      47899999999887653

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=2.6e-17  Score=151.35  Aligned_cols=223  Identities=9%  Similarity=0.005  Sum_probs=148.0

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEecCch-----hHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH-----LLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~-----~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      |+||||||+|.||.+++++|.++|++|+.++|...     +++........ ....++.++.+|++|.+.+.++++..  
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~--   78 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQA-HIEGNMKLHYGDLTDSTCLVKIINEV--   78 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC----------CEEEEECCTTCHHHHHHHHHHH--
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhh-hccCCcEEEEeecCCchhhHHHHhhc--
Confidence            45599999999999999999999999999999643     22222222111 11357899999999999998887653  


Q ss_pred             HHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017812          135 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  214 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~  214 (365)
                               .++++++.|+....  ..+.+.....+++|+.|+..+++++..+-...  ..++|++||.+.+.....   
T Consensus        79 ---------~~~~v~~~~a~~~~--~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~--~~~~i~~SS~~vyg~~~~---  142 (347)
T d1t2aa_          79 ---------KPTEIYNLGAQSHV--KISFDLAEYTADVDGVGTLRLLDAVKTCGLIN--SVKFYQASTSELYGKVQE---  142 (347)
T ss_dssp             ---------CCSEEEECCSCCCH--HHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTT--TCEEEEEEEGGGTCSCSS---
T ss_pred             ---------ccceeeeeeecccc--chhhccchhhhhhHHHHHHHHHHHHHHcCCCC--CcEEEEecchheecCCCC---
Confidence                     37788888876321  12234456678999999999999887664433  358999999776532111   


Q ss_pred             CccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHh
Q 017812          215 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLL  294 (365)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  294 (365)
                            ..+.+..+..+...|+.||.+.+.+++..++++      ++.+..++|+.+..|-...................
T Consensus       143 ------~~~~E~~~~~P~~~Yg~sK~~aE~~~~~~~~~~------~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~  210 (347)
T d1t2aa_         143 ------IPQKETTPFYPRSPYGAAKLYAYWIVVNFREAY------NLFAVNGILFNHESPRRGANFVTRKISRSVAKIYL  210 (347)
T ss_dssp             ------SSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH------CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHH
T ss_pred             ------CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh------CCCEEEEEecceeCCCCCCCccccccceeeehhhc
Confidence                  112223555667889999999999999887754      67888899988877643221111111111111111


Q ss_pred             --------------cCCCCHHHHHHHHHHHhcC
Q 017812          295 --------------GLLQSPEKGINSVLDAALA  313 (365)
Q Consensus       295 --------------~~~~~p~e~A~~i~~~~l~  313 (365)
                                    +-+..++|++++++.++..
T Consensus       211 ~~~~~~~~g~g~~~r~~i~v~D~~~a~~~~~~~  243 (347)
T d1t2aa_         211 GQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQN  243 (347)
T ss_dssp             TSCSCEEESCTTCEECCEEHHHHHHHHHHHHHS
T ss_pred             CCcceeecCCCcceeeeeEecHHHHHHHHHhhc
Confidence                          1246889999999965544

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.74  E-value=4.7e-17  Score=149.30  Aligned_cols=183  Identities=14%  Similarity=0.055  Sum_probs=132.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhccC
Q 017812           61 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  140 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~~  140 (365)
                      .||||||+|.||.+++++|+++|++|++++|-............... ..++.++++|++|.+.+.++++.         
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~l~~~~~~---------   71 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLG-GKHPTFVEGDIRNEALMTEILHD---------   71 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHH-TSCCEEEECCTTCHHHHHHHHHH---------
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhc-CCCCEEEEeecCCHHHHHHHHhc---------
Confidence            39999999999999999999999999999873322111122221111 34788999999999988877763         


Q ss_pred             CCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCccccc
Q 017812          141 MHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITG  220 (365)
Q Consensus       141 ~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~~~~  220 (365)
                        .++|++||.|+....  ..+.++.+..+++|+.|+..+++++...-     ..++|++||.+.+.........+    
T Consensus        72 --~~~d~ViHlAa~~~~--~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~-----v~~~i~~Ss~~vy~~~~~~~~~e----  138 (338)
T d1udca_          72 --HAIDTVIHFAGLKAV--GESVQKPLEYYDNNVNGTLRLISAMRAAN-----VKNFIFSSSATVYGDQPKIPYVE----  138 (338)
T ss_dssp             --TTCSEEEECCSCCCH--HHHHHCHHHHHHHHHHHHHHHHHHHHHHT-----CCEEEEEEEGGGGCSCCSSSBCT----
T ss_pred             --cCCCEEEECCCccch--hhHHhCHHHHHHhHHHHHHHHHHHHHHhC-----CCEEEecCcceEEcccccccccc----
Confidence              358999999996421  12334556899999999999999887652     35899999987663322211111    


Q ss_pred             cccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCc
Q 017812          221 KFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNI  275 (365)
Q Consensus       221 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~  275 (365)
                          +.....+...|+.+|.+.+.+.+..+.+     ..++.+..++|+.+-.+.
T Consensus       139 ----~~~~~~p~~~Y~~sK~~~e~~~~~~~~~-----~~~~~~~ilR~~~v~G~~  184 (338)
T d1udca_         139 ----SFPTGTPQSPYGKSKLMVEQILTDLQKA-----QPDWSIALLRYFNPVGAH  184 (338)
T ss_dssp             ----TSCCCCCSSHHHHHHHHHHHHHHHHHHH-----STTCEEEEEEECEEECCC
T ss_pred             ----ccccCCCcchHHHHHhhhhHHHHHHHhh-----ccCCeEEEEeeccEEecc
Confidence                0123455778999999999999888776     357889899999887653

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.74  E-value=8e-17  Score=147.45  Aligned_cols=233  Identities=13%  Similarity=0.004  Sum_probs=152.6

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCch-----hHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHH
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH-----LLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  133 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~-----~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~  133 (365)
                      .|+||||||||.||.+++++|.++|++|+.++|...     +.+.+....... ....+.++.+|+++.+++.+.++.  
T Consensus         1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Di~~~~~~~~~~~~--   77 (339)
T d1n7ha_           1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNV-NKALMKLHYADLTDASSLRRWIDV--   77 (339)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC---------CCEEEEECCTTCHHHHHHHHHH--
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhc-cccceEEEEccccCHHHHHHHHhh--
Confidence            379999999999999999999999999999998532     222222222211 135688999999999988887764  


Q ss_pred             HHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          134 QWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       134 ~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                               .++|++||.|+....  ..+.+.....+.+|..++..++.++...........++++.||...........
T Consensus        78 ---------~~~D~Vih~Aa~~~~--~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~~~  146 (339)
T d1n7ha_          78 ---------IKPDEVYNLAAQSHV--AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQ  146 (339)
T ss_dssp             ---------HCCSEEEECCSCCCH--HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSB
T ss_pred             ---------hccchhhhccccccc--cccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCCCCC
Confidence                     359999999997432  122345567889999999999998876554433234566666655432222212


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  293 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  293 (365)
                      +          +..+..+...|+.||.+.+.++...+++.      ++.++.++|+.|-.|...................
T Consensus       147 ~----------E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~------~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~  210 (339)
T d1n7ha_         147 S----------ETTPFHPRSPYAASKCAAHWYTVNYREAY------GLFACNGILFNHESPRRGENFVTRKITRALGRIK  210 (339)
T ss_dssp             C----------TTSCCCCCSHHHHHHHHHHHHHHHHHHHH------CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHH
T ss_pred             C----------CCCCCCCcchhhHHHHHHHHHHHHHHHHh------CCCEEEEEEccccCCCCCCCCCcchhhHHHHHHh
Confidence            1          22556678899999999999999888754      6899999999998775432111111111111111


Q ss_pred             hc--------------CCCCHHHHHHHHHHHhcCCCCCcccEE
Q 017812          294 LG--------------LLQSPEKGINSVLDAALAPPETSGVYF  322 (365)
Q Consensus       294 ~~--------------~~~~p~e~A~~i~~~~l~~~~~~G~~~  322 (365)
                      .+              -+...+|+|+++..++ ..+...+.++
T Consensus       211 ~~~~~~~~~g~~~~~rd~~~v~D~a~~~~~~~-~~~~~~~~~~  252 (339)
T d1n7ha_         211 VGLQTKLFLGNLQASRDWGFAGDYVEAMWLML-QQEKPDDYVV  252 (339)
T ss_dssp             HTSCCCEEESCTTCEEECEEHHHHHHHHHHHH-TSSSCCEEEE
T ss_pred             cCCCCeEEeCCCCccccceeeehHHHHHHHHH-hcCCCCcccc
Confidence            11              1456899999998544 4444334343

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.74  E-value=8e-17  Score=146.39  Aligned_cols=234  Identities=12%  Similarity=-0.017  Sum_probs=153.1

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhcc
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  139 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~  139 (365)
                      |+||||||||.||++++++|.++|++|+.++|......  ...+.......++.++.+|++|.+++.+.+...       
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-------   71 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDT--RWRLRELGIEGDIQYEDGDMADACSVQRAVIKA-------   71 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCC--CHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHH-------
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCccc--HHHHHHhcccCCcEEEEccccChHHhhhhhccc-------
Confidence            68999999999999999999999999999999754211  122222222457899999999999888776653       


Q ss_pred             CCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcccc
Q 017812          140 DMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETIT  219 (365)
Q Consensus       140 ~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~~~  219 (365)
                          ..++++++|+......  ..+..+..+++|+.|+..+++++...-.    ..++++.||...+......       
T Consensus        72 ----~~~~~~~~a~~~~~~~--~~~~~~~~~~~n~~g~~~~l~~~~~~~~----~~~~i~~Ss~~~~~~~~~~-------  134 (321)
T d1rpna_          72 ----QPQEVYNLAAQSFVGA--SWNQPVTTGVVDGLGVTHLLEAIRQFSP----ETRFYQASTSEMFGLIQAE-------  134 (321)
T ss_dssp             ----CCSEEEECCSCCCHHH--HTTSHHHHHHHHTHHHHHHHHHHHHHCT----TSEEEEEEEGGGGCSCSSS-------
T ss_pred             ----cccccccccccccccc--cccchHHHHhhhhhchHHHHHHHHHhCC----CcccccccchhhcCcccCC-------
Confidence                3678888887642211  1233567899999999999988865422    2477777776544221111       


Q ss_pred             ccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHHHh-----
Q 017812          220 GKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLKLL-----  294 (365)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~-----  294 (365)
                        .+.+..+..+...|+.||.+.+.+++.++.+.      ++.+..+.|+.+..|....................     
T Consensus       135 --~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~------~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~  206 (321)
T d1rpna_         135 --RQDENTPFYPRSPYGVAKLYGHWITVNYRESF------GLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQE  206 (321)
T ss_dssp             --SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH------CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSC
T ss_pred             --CCCCCCCccccChhHHHHHHHHHHHHHHHhhc------CCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCc
Confidence              11122455667889999999999999998764      57888999988877754321111111111111111     


Q ss_pred             ---c------CCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017812          295 ---G------LLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  330 (365)
Q Consensus       295 ---~------~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~  330 (365)
                         +      -+...+|+|++++.++..+.  .|.|.. ..++..
T Consensus       207 i~~g~g~~~r~~i~v~D~~~~~~~~~~~~~--~~~~ni-~~~~~~  248 (321)
T d1rpna_         207 LRLGNVDAKRDWGFAGDYVEAMWLMLQQDK--ADDYVV-ATGVTT  248 (321)
T ss_dssp             EEESCTTCEEECEEHHHHHHHHHHHHHSSS--CCCEEE-CCSCEE
T ss_pred             EEECCCCeEEccEEeHHHHHHHHHHHhcCC--cCCcee-cccccc
Confidence               1      24688999999996554432  345544 444555

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.74  E-value=7e-18  Score=156.40  Aligned_cols=248  Identities=11%  Similarity=0.075  Sum_probs=161.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEE-EecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhcc
Q 017812           61 VCIVTGATSGLGAAAAYALSREGFHVVL-VGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  139 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G~~Vil-~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~  139 (365)
                      .||||||+|.||.+++++|++.|++|++ +++..... . ...+.......++.++.+|++|.+.+.++++..       
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~-~-~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~-------   72 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAG-N-LESLSDISESNRYNFEHADICDSAEITRIFEQY-------   72 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTC-C-GGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHH-------
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccc-c-HHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhC-------
Confidence            4899999999999999999999997554 44322110 0 111222223458899999999999998887642       


Q ss_pred             CCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCC----CCCeEEEEcCCcccccccccC-C
Q 017812          140 DMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSP----VPSRIVNVTSFTHRNVFNAQV-N  214 (365)
Q Consensus       140 ~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~----~~g~iV~vsS~~~~~~~~~~~-~  214 (365)
                          .+|++||+|+....  ..+.++.+.++++|+.|+..+.+.+........    ...++|++||.+.+....... .
T Consensus        73 ----~~d~VihlAa~~~~--~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~  146 (361)
T d1kewa_          73 ----QPDAVMHLAAESHV--DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEV  146 (361)
T ss_dssp             ----CCSEEEECCSCCCH--HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGS
T ss_pred             ----CCCEEEECccccch--hhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCcc
Confidence                49999999996432  122344567899999999999999988654321    135899999988775432211 1


Q ss_pred             CccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHH-HHHH
Q 017812          215 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFT-VLKL  293 (365)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~-~~~~  293 (365)
                      .+........+..+..+.+.|+.||.+.+.+++..+..+      ++.+..++|+.|-.|............... .-.+
T Consensus       147 ~~~~~~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~------~i~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~g~~  220 (361)
T d1kewa_         147 ENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY------GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKP  220 (361)
T ss_dssp             CTTSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH------CCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCC
T ss_pred             ccccCCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHh------CCCEEEEecCceECcCCCcCcHHHHHHHHHHcCCC
Confidence            111111111122455667889999999999999998754      688999999999887543211111111100 0011


Q ss_pred             h---c------CCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcccc
Q 017812          294 L---G------LLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  331 (365)
Q Consensus       294 ~---~------~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~~  331 (365)
                      .   +      -+...+|+|++++.++... .. |..|....|++..
T Consensus       221 ~~v~g~g~~~r~~i~v~D~a~ai~~~~~~~-~~-~~~~Ni~s~~~~s  265 (361)
T d1kewa_         221 LPIYGKGDQIRDWLYVEDHARALHMVVTEG-KA-GETYNIGGHNEKK  265 (361)
T ss_dssp             EEEETTSCCEEEEEEHHHHHHHHHHHHHHC-CT-TCEEEECCCCEEE
T ss_pred             cEEeCCCCeEEeCEEHHHHHHHHHHHHhcC-CC-CCeEEECCCCCcc
Confidence            1   1      1358999999999655443 33 5566666666663

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.73  E-value=4.1e-17  Score=150.20  Aligned_cols=185  Identities=16%  Similarity=0.121  Sum_probs=132.8

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchh-HHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhc
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHL-LSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  138 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~  138 (365)
                      |+||||||||.||.+++++|+++|++|+++++.... ...... ..... ..++.++++|++|.++++.++..       
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~-~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~-------   72 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVAR-LEVLT-KHHIPFYEVDLCDRKGLEKVFKE-------   72 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHH-HHHHH-TSCCCEEECCTTCHHHHHHHHHH-------
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHh-HHhhc-ccCCeEEEeecCCHHHHHHHHhc-------
Confidence            789999999999999999999999999999763221 111111 11111 34788999999999998887753       


Q ss_pred             cCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCccc
Q 017812          139 SDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETI  218 (365)
Q Consensus       139 ~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~~  218 (365)
                          .++|++||.|+......  ..+..+....+|+.|+..+++++...-     ..++|++||...+............
T Consensus        73 ----~~~d~VihlAa~~~~~~--~~~~~~~~~~~N~~~t~~ll~~~~~~~-----i~~~i~~SS~~vyg~~~~~~~~~~~  141 (347)
T d1z45a2          73 ----YKIDSVIHFAGLKAVGE--STQIPLRYYHNNILGTVVLLELMQQYN-----VSKFVFSSSATVYGDATRFPNMIPI  141 (347)
T ss_dssp             ----SCCCEEEECCSCCCHHH--HHHSHHHHHHHHHHHHHHHHHHHHHHT-----CCEEEEEEEGGGGCCGGGSTTCCSB
T ss_pred             ----cCCCEEEEccccccccc--cccCcccccccchhhhHHHHHHHHhcc-----cceEEeecceeeecCcccCCCCCcc
Confidence                35999999999753211  233446788899999999999986542     3589999998877443322221212


Q ss_pred             cccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccC
Q 017812          219 TGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKT  273 (365)
Q Consensus       219 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T  273 (365)
                      .     +..+..+...|+.||.+.+.+++.+.+..    ..++.+..++|+.+-.
T Consensus       142 ~-----e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----~~~~~~~~lR~~~v~g  187 (347)
T d1z45a2         142 P-----EECPLGPTNPYGHTKYAIENILNDLYNSD----KKSWKFAILRYFNPIG  187 (347)
T ss_dssp             C-----TTSCCCCCSHHHHHHHHHHHHHHHHHHHS----TTSCEEEEEEECEEEC
T ss_pred             c-----cccCCCCCChhHhHHHHHHHHHHHHHHhh----ccCCcEEEEeecceEe
Confidence            1     12445556789999999999999988764    4788888888876654

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.70  E-value=1e-15  Score=140.27  Aligned_cols=237  Identities=12%  Similarity=0.028  Sum_probs=156.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCch----hHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH----LLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  133 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~----~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~  133 (365)
                      +-|++|||||||.||.+++++|.++|++|+.++|...    ..+.... +........+.++.+|+.|........    
T Consensus        15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~d~~~~~~~~----   89 (341)
T d1sb8a_          15 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRS-LVSEKQWSNFKFIQGDIRNLDDCNNAC----   89 (341)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHH-HSCHHHHTTEEEEECCTTSHHHHHHHH----
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHH-hhhhcccCCeeEEeecccccccccccc----
Confidence            4589999999999999999999999999999987332    2222211 111111246889999999987654432    


Q ss_pred             HHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          134 QWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       134 ~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                               ...+.++|.++....  ..+.++....+++|+.|+..+++++...    + ..++|++||.+.+.......
T Consensus        90 ---------~~~~~v~~~~a~~~~--~~~~~~~~~~~~~Nv~gt~~ll~~~~~~----~-~~~~i~~SS~~vyg~~~~~~  153 (341)
T d1sb8a_          90 ---------AGVDYVLHQAALGSV--PRSINDPITSNATNIDGFLNMLIAARDA----K-VQSFTYAASSSTYGDHPGLP  153 (341)
T ss_dssp             ---------TTCSEEEECCSCCCH--HHHHHCHHHHHHHHTHHHHHHHHHHHHT----T-CSEEEEEEEGGGGTTCCCSS
T ss_pred             ---------ccccccccccccccc--cccccCccchhheeehhHHHHHHHHHhc----C-CceEEEcccceeeCCCCCCC
Confidence                     347788887775322  1135566789999999999999988554    2 35999999988774322211


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc---hhHHHHHHHHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV---PSFLSLMAFTV  290 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~---~~~~~~~~~~~  290 (365)
                               ..+..+..+.+.|+.||.+.+.+++.+++..      ++++..++|+.+-++.....   ...........
T Consensus       154 ---------~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~------~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~  218 (341)
T d1sb8a_         154 ---------KVEDTIGKPLSPYAVTKYVNELYADVFSRCY------GFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSM  218 (341)
T ss_dssp             ---------BCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH------CCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHH
T ss_pred             ---------ccCCCCCCCCCcchHHHHHHHHHHHHHHHHh------CCCeEEEEeceeeccCcCCCCchhhhHHHHHHHH
Confidence                     1112455667899999999999999988754      68889999998876643211   11111111111


Q ss_pred             HH--Hh---------cCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017812          291 LK--LL---------GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  330 (365)
Q Consensus       291 ~~--~~---------~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~  330 (365)
                      ..  +.         +-+.-++|+|.++..++.......|..|....++..
T Consensus       219 ~~g~~i~~~g~g~~~r~~i~v~D~~~a~~~~~~~~~~~~~~~~~~~~~~~~  269 (341)
T d1sb8a_         219 IQGDDVYINGDGETSRDFCYIENTVQANLLAATAGLDARNQVYNIAVGGRT  269 (341)
T ss_dssp             HHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCGGGCSEEEEESCSCCE
T ss_pred             HcCCceEEcCCCCEEEEEEEEeccchhhhhhhhccccccceeeeecccccc
Confidence            10  01         124567899999886665554555666665555555

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=1.6e-15  Score=139.28  Aligned_cols=239  Identities=13%  Similarity=0.106  Sum_probs=154.8

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEec------CchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHH
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGFHVVLVGR------SSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  133 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~~Vil~~r------~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~  133 (365)
                      |.||||||||.||.+++++|.++|++|+.++|      +.....+..+.+.... ..++.++++|++|.+.+.+++..  
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~l~~~~~~--   79 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELT-GRSVEFEEMDILDQGALQRLFKK--   79 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHH-TCCCEEEECCTTCHHHHHHHHHH--
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhc-CCCcEEEEeeccccccccccccc--
Confidence            67899999999999999999999999999864      1111112222222211 45789999999999998777653  


Q ss_pred             HHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccC
Q 017812          134 QWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQV  213 (365)
Q Consensus       134 ~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~  213 (365)
                               ..+++++|.|+....  ..+.+.....+++|+.|+..+++++...    + -.+++++||...+.......
T Consensus        80 ---------~~~~~i~h~Aa~~~~--~~~~~~p~~~~~~Nv~gt~~l~~~~~~~----~-v~~~i~~ss~~~~~~~~~~~  143 (346)
T d1ek6a_          80 ---------YSFMAVIHFAGLKAV--GESVQKPLDYYRVNLTGTIQLLEIMKAH----G-VKNLVFSSSATVYGNPQYLP  143 (346)
T ss_dssp             ---------CCEEEEEECCSCCCH--HHHHHCHHHHHHHHHHHHHHHHHHHHHT----T-CCEEEEEEEGGGGCSCSSSS
T ss_pred             ---------cccccccccccccCc--HhhHhCHHHHHHhhhcccccccchhhhc----C-cccccccccceeeecccccc
Confidence                     458999999997542  1223345678999999999998887443    2 35899999887764332221


Q ss_pred             CCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccc--------cchh-HHH
Q 017812          214 NNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMR--------EVPS-FLS  284 (365)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~--------~~~~-~~~  284 (365)
                      .....        ........|+.+|.+.+...+.+++.     ..++....+.|+.+.++-..        ..+. ...
T Consensus       144 ~~~~~--------~~~~~~~~Y~~~k~~~e~~~~~~~~~-----~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~  210 (346)
T d1ek6a_         144 LDEAH--------PTGGCTNPYGKSKFFIEEMIRDLCQA-----DKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMP  210 (346)
T ss_dssp             BCTTS--------CCCCCSSHHHHHHHHHHHHHHHHHHH-----CTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHH
T ss_pred             ccccc--------cccccCChHHHHHHHHHHHHHHHHHh-----ccCCceEEEeecceeccCCCCCcCccccccHHHHHH
Confidence            11110        12234567999999999999888765     45788888999877654211        1111 111


Q ss_pred             HHHHHHHH---H---------------hcCCCCHHHHHHHHHHHhcCC-CCCcccEEeCCCCccc
Q 017812          285 LMAFTVLK---L---------------LGLLQSPEKGINSVLDAALAP-PETSGVYFFGGKGRTV  330 (365)
Q Consensus       285 ~~~~~~~~---~---------------~~~~~~p~e~A~~i~~~~l~~-~~~~G~~~~~~~g~~~  330 (365)
                      ........   +               .+.+..++|+|.++..+.... ....++.|....++..
T Consensus       211 ~~~~~~~~~~~~i~i~g~~~~~~~g~~~Rdfi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~~~~~  275 (346)
T d1ek6a_         211 YVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGY  275 (346)
T ss_dssp             HHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCE
T ss_pred             HHHHHHHcCCCcEEEcCCcccCCCCCeeEeEEEEEeccchhhhhccccccccCceEEEeCCCCcc
Confidence            11111000   0               012568999998887554332 3445667776777666

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.67  E-value=2.7e-16  Score=144.58  Aligned_cols=241  Identities=13%  Similarity=0.059  Sum_probs=150.2

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhcc
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  139 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~  139 (365)
                      |.||||||||.||.+++++|.++|++|.+++++...-..-...+ ....+.++.++.+|++|.+.+..++.         
T Consensus         3 mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~-~~~~~~~i~~~~~Di~d~~~~~~~~~---------   72 (346)
T d1oc2a_           3 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANL-EAILGDRVELVVGDIADAELVDKLAA---------   72 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGT-GGGCSSSEEEEECCTTCHHHHHHHHT---------
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHH-HHhhcCCeEEEEccCCCHHHHHHHHh---------
Confidence            67999999999999999999999986555544310000000001 11124588999999999988877643         


Q ss_pred             CCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC---Cc
Q 017812          140 DMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN---NE  216 (365)
Q Consensus       140 ~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~---~~  216 (365)
                          ..|.++|.|+.....  ....+.++.+++|+.|+..++..+...      ..++|++||...+........   ..
T Consensus        73 ----~~~~v~~~a~~~~~~--~~~~~~~~~~~~N~~g~~nll~~~~~~------~~k~i~~ss~~vyg~~~~~~~~~~~~  140 (346)
T d1oc2a_          73 ----KADAIVHYAAESHND--NSLNDPSPFIHTNFIGTYTLLEAARKY------DIRFHHVSTDEVYGDLPLREDLPGHG  140 (346)
T ss_dssp             ----TCSEEEECCSCCCHH--HHHHCCHHHHHHHTHHHHHHHHHHHHH------TCEEEEEEEGGGGCCBCCGGGSTTTT
T ss_pred             ----hhhhhhhhhhccccc--chhhCcccceeeehHhHHhhhhhhccc------cccccccccceEecccCccccccccc
Confidence                367788998875332  112344678999999999999877554      257888888776643211110   11


Q ss_pred             cccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHHH----
Q 017812          217 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVLK----  292 (365)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~----  292 (365)
                      ......+.+..+..+.+.|+.||.+.+.+++..+++      .++++.+++|+.|-.|-.................    
T Consensus       141 ~~~~~~~~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~------~~i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~  214 (346)
T d1oc2a_         141 EGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRS------FGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPK  214 (346)
T ss_dssp             CSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHH------HCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCE
T ss_pred             cCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHHH------cCCCEEEEeecceeCCCCCccchhHHHHHHHHcCCcee
Confidence            111222333345566788999999999999988875      4799999999999876432211111111111110    


Q ss_pred             Hh------cCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017812          293 LL------GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  330 (365)
Q Consensus       293 ~~------~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~  330 (365)
                      ..      +.+...+|+|++++.+.. .+..++.++. .++++.
T Consensus       215 i~~~g~~~r~~i~v~D~a~a~~~~~~-~~~~~~~~~~-~~~~~~  256 (346)
T d1oc2a_         215 LYGEGKNVRDWIHTNDHSTGVWAILT-KGRMGETYLI-GADGEK  256 (346)
T ss_dssp             EETTSCCEEECEEHHHHHHHHHHHHH-HCCTTCEEEE-CCSCEE
T ss_pred             EeCCCCccccccchhhHHHHHHHHHh-hcccCccccc-cccccc
Confidence            01      124678999999885443 3444444544 444554

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=2.1e-15  Score=136.67  Aligned_cols=227  Identities=13%  Similarity=0.065  Sum_probs=142.7

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEecCch-hHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhc
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH-LLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  138 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~  138 (365)
                      |.||||||+|.||++++++|.++|++|++++|... ..+.    +.......++.....|..+.                
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~----------------   61 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRN----VEHWIGHENFELINHDVVEP----------------   61 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGG----TGGGTTCTTEEEEECCTTSC----------------
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHH----HHHhcCCCceEEEehHHHHH----------------
Confidence            78999999999999999999999999999987322 1111    11111122344444444321                


Q ss_pred             cCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccc-cCCCcc
Q 017812          139 SDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNA-QVNNET  217 (365)
Q Consensus       139 ~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~-~~~~~~  217 (365)
                        ....+|++||.|+......  ..++.++.+++|+.|+..+++++...    +  .++|++||.+.+..... +.+++ 
T Consensus        62 --~~~~~d~VihlAa~~~~~~--~~~~~~~~~~~Nv~g~~~ll~~~~~~----~--~k~I~~SS~~vy~~~~~~~~~e~-  130 (312)
T d2b69a1          62 --LYIEVDQIYHLASPASPPN--YMYNPIKTLKTNTIGTLNMLGLAKRV----G--ARLLLASTSEVYGDPEVHPQSED-  130 (312)
T ss_dssp             --CCCCCSEEEECCSCCSHHH--HTTCHHHHHHHHHHHHHHHHHHHHHH----T--CEEEEEEEGGGGBSCSSSSBCTT-
T ss_pred             --HHcCCCEEEECcccCCchh--HHhCHHHHHHHHHHHHHHHHHHHHHc----C--CcEEEEEChheecCCCCCCCCcc-
Confidence              2245999999999753211  12345678999999999999887543    2  48999999876643221 11211 


Q ss_pred             ccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccch-hHHHHHHHHHH--HHh
Q 017812          218 ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVP-SFLSLMAFTVL--KLL  294 (365)
Q Consensus       218 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~-~~~~~~~~~~~--~~~  294 (365)
                          .+....+..+...|+.||.+.+.+++..++++      |+.+..++|+.|-.|...... ...........  .+.
T Consensus       131 ----~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~------~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i  200 (312)
T d2b69a1         131 ----YWGHVNPIGPRACYDEGKRVAETMCYAYMKQE------GVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPL  200 (312)
T ss_dssp             ----CCCBCCSSSTTHHHHHHHHHHHHHHHHHHHHH------CCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCE
T ss_pred             ----ccCCCCCCCCccHHHHHHHHHHHHHHHHHHHh------CCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCe
Confidence                11122455677899999999999999998764      688999999999876533211 11111111111  010


Q ss_pred             ---------cCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017812          295 ---------GLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  330 (365)
Q Consensus       295 ---------~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~  330 (365)
                               +-+...+|++++++.++ . ...+|.| ....|++.
T Consensus       201 ~i~~~g~~~r~~i~v~D~~~~~~~~~-~-~~~~~~~-n~~~~~~~  242 (312)
T d2b69a1         201 TVYGSGSQTRAFQYVSDLVNGLVALM-N-SNVSSPV-NLGNPEEH  242 (312)
T ss_dssp             EEESSSCCEEECEEHHHHHHHHHHHH-T-SSCCSCE-EESCCCEE
T ss_pred             EEeCCCCeeEccEEHHHHHHHHHHHH-h-hccCCce-EecCCccc
Confidence                     12357899999998543 3 2334554 44556665

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.65  E-value=9.8e-15  Score=133.63  Aligned_cols=232  Identities=10%  Similarity=0.102  Sum_probs=152.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHCC-CEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhcc
Q 017812           61 VCIVTGATSGLGAAAAYALSREG-FHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  139 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G-~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~  139 (365)
                      .||||||||.||.+++++|+++| ++|+.+++........       ....++.++++|+++.+++.+.+.   +     
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~-------~~~~~~~~i~~Di~~~~~~~~~~~---~-----   66 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRF-------LNHPHFHFVEGDISIHSEWIEYHV---K-----   66 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGG-------TTCTTEEEEECCTTTCSHHHHHHH---H-----
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhh-------ccCCCeEEEECccCChHHHHHHHH---h-----
Confidence            48999999999999999999999 5899998865432221       124579999999998877655332   1     


Q ss_pred             CCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcccc
Q 017812          140 DMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETIT  219 (365)
Q Consensus       140 ~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~~~  219 (365)
                          .+|++||+|+.....  ...+..+..+++|+.|+..+++++...      ..+.+++||...+.............
T Consensus        67 ----~~d~Vih~a~~~~~~--~~~~~~~~~~~~nv~gt~~ll~~~~~~------~~~~~~~ss~~~~~~~~~~~~~~~~~  134 (342)
T d2blla1          67 ----KCDVVLPLVAIATPI--EYTRNPLRVFELDFEENLRIIRYCVKY------RKRIIFPSTSEVYGMCSDKYFDEDHS  134 (342)
T ss_dssp             ----HCSEEEECBCCCCHH--HHHHSHHHHHHHHTHHHHHHHHHHHHT------TCEEEEECCGGGGBTCCCSSBCTTTC
T ss_pred             ----CCCcccccccccccc--ccccCCccccccccccccccccccccc------cccccccccccccccccccccccccc
Confidence                389999999975432  123445678999999999999987443      25777888877664433322211111


Q ss_pred             ccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc-------hhHHHHHHHHHHH
Q 017812          220 GKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV-------PSFLSLMAFTVLK  292 (365)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~-------~~~~~~~~~~~~~  292 (365)
                      .  ........+...|+.||.+.+.+++..++++      |+.+..++|..+..+.....       ...........+.
T Consensus       135 ~--~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~------~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (342)
T d2blla1         135 N--LIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE------GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVE  206 (342)
T ss_dssp             C--CBCCCTTCGGGHHHHHHHHHHHHHHHHHHHH------CCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHH
T ss_pred             c--ccccccCCCcchhhhcccchhhhhhhhhccc------CceeEEeeccccccccccccccccccccccchHHHHHHHh
Confidence            1  1111344567899999999999999998764      67888888888766532211       1111111111110


Q ss_pred             --H---h------cCCCCHHHHHHHHHHHhcCCC-CCcccEEeCCCC
Q 017812          293 --L---L------GLLQSPEKGINSVLDAALAPP-ETSGVYFFGGKG  327 (365)
Q Consensus       293 --~---~------~~~~~p~e~A~~i~~~~l~~~-~~~G~~~~~~~g  327 (365)
                        +   .      +-+...+|+|+++..++..+. ...|..|....|
T Consensus       207 g~~~~~~~~g~~~r~~i~v~D~~~a~~~~~~~~~~~~~g~~~Nig~~  253 (342)
T d2blla1         207 GSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNP  253 (342)
T ss_dssp             TCCEEEGGGSCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCT
T ss_pred             CCCccccCCCCeeeeecccccccceeeeehhhccccCCCeEEEEecc
Confidence              0   0      125689999999997766543 456778865443

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.64  E-value=1.3e-15  Score=137.88  Aligned_cols=168  Identities=12%  Similarity=0.076  Sum_probs=124.7

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhc
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  138 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~  138 (365)
                      .|.||||||+|.||.+++++|+++|+.|+++++..                      .+|+.+.+.+..+++.       
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~----------------------~~~~~~~~~~~~~~~~-------   52 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD----------------------ELNLLDSRAVHDFFAS-------   52 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT----------------------TCCTTCHHHHHHHHHH-------
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch----------------------hccccCHHHHHHHHhh-------
Confidence            46799999999999999999999999888765432                      1688998888877653       


Q ss_pred             cCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccccccccc-CCCcc
Q 017812          139 SDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQ-VNNET  217 (365)
Q Consensus       139 ~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~-~~~~~  217 (365)
                          ..+|.++|+|+..... ........+.+++|+.|+..+++++...    + -.++|++||.+.+...... .+.+ 
T Consensus        53 ----~~~d~v~~~a~~~~~~-~~~~~~~~~~~~~Nv~gt~~ll~~a~~~----~-v~~~i~~SS~~vyg~~~~~~~~E~-  121 (315)
T d1e6ua_          53 ----ERIDQVYLAAAKVGGI-VANNTYPADFIYQNMMIESNIIHAAHQN----D-VNKLLFLGSSCIYPKLAKQPMAES-  121 (315)
T ss_dssp             ----HCCSEEEECCCCCCCH-HHHHHCHHHHHHHHHHHHHHHHHHHHHT----T-CCEEEEECCGGGSCTTCCSSBCGG-
T ss_pred             ----cCCCEEEEcchhcccc-ccchhhHHHHHHHHHHHHHHHHHHHHHc----C-CCEEEEECCceEcCCCCCCCccCC-
Confidence                3589999999765321 1234455667899999999999888554    1 3589999999877433221 1111 


Q ss_pred             ccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcc
Q 017812          218 ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIM  276 (365)
Q Consensus       218 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~  276 (365)
                          ...+..+.++...|+.||.+.+.+++.++++.      |+++..++|+.|-.|..
T Consensus       122 ----~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~------gl~~~ilR~~~vyGp~~  170 (315)
T d1e6ua_         122 ----ELLQGTLEPTNEPYAIAKIAGIKLCESYNRQY------GRDYRSVMPTNLYGPHD  170 (315)
T ss_dssp             ----GTTSSCCCGGGHHHHHHHHHHHHHHHHHHHHH------CCEEEEEEECEEESTTC
T ss_pred             ----ccccCCCCCCCCHHHHHHHHHHHHHHHHHHHh------CCCEEEEeeccEECCCC
Confidence                11122455667889999999999999998764      78999999999977643

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=1.1e-15  Score=129.87  Aligned_cols=196  Identities=15%  Similarity=0.025  Sum_probs=127.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      ..|.|+||||||+||.+++++|.++|++|++++|+++++...        ....+.++.+|++|.+++.++++       
T Consensus         2 ~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~--------~~~~~~~~~gD~~d~~~l~~al~-------   66 (205)
T d1hdoa_           2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE--------GPRPAHVVVGDVLQAADVDKTVA-------   66 (205)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS--------SCCCSEEEESCTTSHHHHHHHHT-------
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccc--------cccccccccccccchhhHHHHhc-------
Confidence            467899999999999999999999999999999998864321        13468899999999988766543       


Q ss_pred             ccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcc
Q 017812          138 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNET  217 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~  217 (365)
                            ..|++|+++|...+...         .+++..++..+++++    ++.+ -.|+|++||.......        
T Consensus        67 ------~~d~vi~~~g~~~~~~~---------~~~~~~~~~~l~~aa----~~~~-v~r~i~~ss~~~~~~~--------  118 (205)
T d1hdoa_          67 ------GQDAVIVLLGTRNDLSP---------TTVMSEGARNIVAAM----KAHG-VDKVVACTSAFLLWDP--------  118 (205)
T ss_dssp             ------TCSEEEECCCCTTCCSC---------CCHHHHHHHHHHHHH----HHHT-CCEEEEECCGGGTSCT--------
T ss_pred             ------CCCEEEEEeccCCchhh---------hhhhHHHHHHHHHHH----HhcC-CCeEEEEeeeeccCCC--------
Confidence                  47999999997533211         134444555555444    4443 4699999997654110        


Q ss_pred             ccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcccc-chhHHHHHHHHHHHHhcC
Q 017812          218 ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMRE-VPSFLSLMAFTVLKLLGL  296 (365)
Q Consensus       218 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~~~~  296 (365)
                              ....+....|...|.+.+.+.       .   ..|+..+.|+||.+...-... .......      .....
T Consensus       119 --------~~~~~~~~~~~~~~~~~e~~l-------~---~~~~~~tiirp~~~~~~~~~~~~~~~~~~------~~~~~  174 (205)
T d1hdoa_         119 --------TKVPPRLQAVTDDHIRMHKVL-------R---ESGLKYVAVMPPHIGDQPLTGAYTVTLDG------RGPSR  174 (205)
T ss_dssp             --------TCSCGGGHHHHHHHHHHHHHH-------H---HTCSEEEEECCSEEECCCCCSCCEEESSS------CSSCS
T ss_pred             --------ccccccccccchHHHHHHHHH-------H---hcCCceEEEecceecCCCCcccEEEeeCC------CCCCC
Confidence                    022334456677776655332       1   468999999999885432221 1000000      00113


Q ss_pred             CCCHHHHHHHHHHHhcCCCCCcccE
Q 017812          297 LQSPEKGINSVLDAALAPPETSGVY  321 (365)
Q Consensus       297 ~~~p~e~A~~i~~~~l~~~~~~G~~  321 (365)
                      +.+.+|+|+.+++++..++ ..|+-
T Consensus       175 ~i~~~DvA~~~~~~l~~~~-~~g~~  198 (205)
T d1hdoa_         175 VISKHDLGHFMLRCLTTDE-YDGHS  198 (205)
T ss_dssp             EEEHHHHHHHHHHTTSCST-TTTCE
T ss_pred             cCCHHHHHHHHHHHhCCCC-CCCEE
Confidence            4689999999998665544 33543

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.62  E-value=7.3e-15  Score=133.77  Aligned_cols=173  Identities=14%  Similarity=0.060  Sum_probs=117.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEecCch-hHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhcc
Q 017812           61 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH-LLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  139 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~  139 (365)
                      .||||||+|.||.+++++|.++|++|+++++-.. ........+..   ..++.++.+|++|.+++.++++..       
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~---~~~~~~i~~Di~~~~~l~~~~~~~-------   71 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS---LGNFEFVHGDIRNKNDVTRLITKY-------   71 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT---TCCCEEEECCTTCHHHHHHHHHHH-------
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhc---cCCcEEEEcccCCHHHHHHHHHhc-------
Confidence            4899999999999999999999999999875322 11222222322   357899999999999988877643       


Q ss_pred             CCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcc--
Q 017812          140 DMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNET--  217 (365)
Q Consensus       140 ~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~--  217 (365)
                          ++|++||+|+.....  ...++.+..+++|+.|+.++++++...-     ..+.++.||...........+...  
T Consensus        72 ----~~d~Vih~aa~~~~~--~~~~~~~~~~~~Nv~gt~nll~~~~~~~-----~~~~i~~sS~~~~~~~~~~~~~~~~~  140 (338)
T d1orra_          72 ----MPDSCFHLAGQVAMT--TSIDNPCMDFEINVGGTLNLLEAVRQYN-----SNCNIIYSSTNKVYGDLEQYKYNETE  140 (338)
T ss_dssp             ----CCSEEEECCCCCCHH--HHHHCHHHHHHHHHHHHHHHHHHHHHHC-----TTCEEEEEEEGGGGTTCTTSCEEECS
T ss_pred             ----CCceEEeeccccccc--ccccChHHHHHHHHHHHHHHHHhhhccc-----cccccccccccccccccccccccccc
Confidence                489999999975321  1234557889999999999999876542     235555555444333221111100  


Q ss_pred             ------ccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhC
Q 017812          218 ------ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLG  254 (365)
Q Consensus       218 ------~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~  254 (365)
                            ..........+..+...|+.+|...+.+.....+.+.
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~~  183 (338)
T d1orra_         141 TRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIFG  183 (338)
T ss_dssp             SCEEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             ccccccccccCcccCCccccccccccccchhhhhhhhhhhccC
Confidence                  0111122234556778999999999999998888764

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.61  E-value=2.8e-15  Score=137.95  Aligned_cols=191  Identities=15%  Similarity=0.066  Sum_probs=135.7

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      ++||.||||||||.||.+++++|.++|++|+.++|+........+....   ...+.++.+|++|++.+.++.+.     
T Consensus         6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~---~~~i~~~~~Dl~d~~~l~~~~~~-----   77 (356)
T d1rkxa_           6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARV---ADGMQSEIGDIRDQNKLLESIRE-----   77 (356)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTT---TTTSEEEECCTTCHHHHHHHHHH-----
T ss_pred             hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhc---ccCCeEEEeeccChHhhhhhhhh-----
Confidence            3689999999999999999999999999999999987654443333211   34689999999999988877654     


Q ss_pred             hccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017812          137 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  216 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~  216 (365)
                            ..+|+++|.|+....  ..+.+..+..+++|+.|+..+++++...-.    ...+++.||..............
T Consensus        78 ------~~~~~v~~~aa~~~~--~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~----~~~~~~~s~~~~~~~~~~~~~~~  145 (356)
T d1rkxa_          78 ------FQPEIVFHMAAQPLV--RLSYSEPVETYSTNVMGTVYLLEAIRHVGG----VKAVVNITSDKCYDNKEWIWGYR  145 (356)
T ss_dssp             ------HCCSEEEECCSCCCH--HHHHHCHHHHHHHHTHHHHHHHHHHHHHCC----CCEEEEECCGGGBCCCCSSSCBC
T ss_pred             ------chhhhhhhhhccccc--cccccCCccccccccccchhhhhhhhcccc----ccccccccccccccccccccccc
Confidence                  348999999986422  222455677899999999999988865421    24555555544432221111111


Q ss_pred             cccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCC---CCCCeEEEEecCCcccCCc
Q 017812          217 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLD---KSRHVSVIAADPGVVKTNI  275 (365)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~---~~~gi~v~~v~PG~v~T~~  275 (365)
                              +..+..+...|+.+|.+.+.+.+..+.++...   ...++.+..+.|+.+..|-
T Consensus       146 --------~~~~~~p~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~  199 (356)
T d1rkxa_         146 --------ENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGG  199 (356)
T ss_dssp             --------TTSCBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTT
T ss_pred             --------cccccCCCCccccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCC
Confidence                    11334456789999999999999988876521   1357889999999887654

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.60  E-value=2.8e-14  Score=131.62  Aligned_cols=235  Identities=12%  Similarity=-0.001  Sum_probs=151.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      ++..||||||||.||.+++++|.++|++|+.+++.....      ....  .....+..+|+.+.+.+.+++        
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~------~~~~--~~~~~~~~~D~~~~~~~~~~~--------   77 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEH------MTED--MFCDEFHLVDLRVMENCLKVT--------   77 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSS------SCGG--GTCSEEEECCTTSHHHHHHHH--------
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccc------hhhh--cccCcEEEeechhHHHHHHHh--------
Confidence            455699999999999999999999999999998754321      0000  124567888998887665543        


Q ss_pred             ccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcc
Q 017812          138 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNET  217 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~  217 (365)
                           ..+|.+||.|+...... .+.+..+..+.+|+.++..++.++...-     -.++|++||...+.........+.
T Consensus        78 -----~~~d~Vih~a~~~~~~~-~~~~~~~~~~~~n~~gt~~ll~~~~~~~-----vk~~i~~SS~~~~~~~~~~~~~~~  146 (363)
T d2c5aa1          78 -----EGVDHVFNLAADMGGMG-FIQSNHSVIMYNNTMISFNMIEAARING-----IKRFFYASSACIYPEFKQLETTNV  146 (363)
T ss_dssp             -----TTCSEEEECCCCCCCHH-HHTTCHHHHHHHHHHHHHHHHHHHHHTT-----CSEEEEEEEGGGSCGGGSSSSSSC
T ss_pred             -----hcCCeEeeccccccccc-ccccccccccccccchhhHHHHhHHhhC-----cccccccccccccccccccccccc
Confidence                 24899999998753321 1234466788999999999999886552     359999999887644322111110


Q ss_pred             ccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccc--hhHHHHHHHHHHHH--
Q 017812          218 ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREV--PSFLSLMAFTVLKL--  293 (365)
Q Consensus       218 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~--~~~~~~~~~~~~~~--  293 (365)
                        .....+..+..+...|+.||.+.+.+++.+++++      |+.+..++|+.+-.+.....  ..............  
T Consensus       147 --~~~~~e~~~~~p~~~Yg~sK~~~E~~~~~~~~~~------gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~  218 (363)
T d2c5aa1         147 --SLKESDAWPAEPQDAFGLEKLATEELCKHYNKDF------GIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTST  218 (363)
T ss_dssp             --EECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH------CCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCS
T ss_pred             --ccccccCCcCCCCCHHHHHHHHHHHHHHHHHHHh------CCCEEEEEeeeEeccCCccccccccccccccccccccc
Confidence              0011112455567889999999999999888764      68899999999876543211  11110111110010  


Q ss_pred             -----------hcCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017812          294 -----------LGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  330 (365)
Q Consensus       294 -----------~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~  330 (365)
                                 .+.+...+|++++++.+. ..+ . |..|....|++.
T Consensus       219 ~~~~~~g~g~~~rd~i~v~D~~~~~~~~~-~~~-~-~~~~ni~~~~~~  263 (363)
T d2c5aa1         219 DRFEMWGDGLQTRSFTFIDECVEGVLRLT-KSD-F-REPVNIGSDEMV  263 (363)
T ss_dssp             SCEEEESCSCCEECCEEHHHHHHHHHHHH-HSS-C-CSCEEECCCCCE
T ss_pred             ccccccCCCCeEEEEeehhHHHHHHHHHH-hCC-C-CCeEEEecCCcc
Confidence                       112467889999988544 332 2 344555556665

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.60  E-value=1.7e-15  Score=137.80  Aligned_cols=231  Identities=15%  Similarity=0.116  Sum_probs=151.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEE------EEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           61 VCIVTGATSGLGAAAAYALSREGFHVV------LVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G~~Vi------l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      .||||||+|.||.+++++|+++|++|.      ..++......  ...+.......++.++..|.++.......      
T Consensus         2 kIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~--~~~~~~~~~~~~~~~~~~d~~~~~~~~~~------   73 (322)
T d1r6da_           2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGN--RANLAPVDADPRLRFVHGDIRDAGLLARE------   73 (322)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCC--GGGGGGGTTCTTEEEEECCTTCHHHHHHH------
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCcccc--HhHhhhhhcCCCeEEEEeccccchhhhcc------
Confidence            489999999999999999999997543      3332211000  01111222246789999999998766542      


Q ss_pred             HHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017812          135 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  214 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~  214 (365)
                             ...+|.++|.|+....  .......+..+++|+.|+..+++++...    + ..++|++||.+.+......  
T Consensus        74 -------~~~~d~vi~~a~~~~~--~~~~~~~~~~~~~N~~gt~~ll~~~~~~----~-~~~~I~~Ss~~~yg~~~~~--  137 (322)
T d1r6da_          74 -------LRGVDAIVHFAAESHV--DRSIAGASVFTETNVQGTQTLLQCAVDA----G-VGRVVHVSTNQVYGSIDSG--  137 (322)
T ss_dssp             -------TTTCCEEEECCSCCCH--HHHHHCCHHHHHHHTHHHHHHHHHHHHT----T-CCEEEEEEEGGGGCCCSSS--
T ss_pred             -------ccccceEEeecccccc--cccccchHHHhhhhHHHHHHHHHHHHHc----C-CceEEEeecceeecCCCCC--
Confidence                   2458999999987432  2234455678899999999999988543    2 3689999998877433211  


Q ss_pred             CccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHH--H
Q 017812          215 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVL--K  292 (365)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~--~  292 (365)
                             .+.+..+..+.+.|+.||.+.+.+++.++++.      ++.+..++|+.|-.|..... ...........  .
T Consensus       138 -------~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~------~~~~~~lR~~~vyGp~~~~~-~~i~~~i~~~~~~~  203 (322)
T d1r6da_         138 -------SWTESSPLEPNSPYAASKAGSDLVARAYHRTY------GLDVRITRCCNNYGPYQHPE-KLIPLFVTNLLDGG  203 (322)
T ss_dssp             -------CBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH------CCCEEEEEECEEECTTCCTT-SHHHHHHHHHHTTC
T ss_pred             -------CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh------CCCEEEEEeeeEECcCCCcC-cHHHHHHHHHHcCC
Confidence                   11122455667889999999999999998764      68899999999987643221 11111111100  0


Q ss_pred             Hh---c------CCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCcccc
Q 017812          293 LL---G------LLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVN  331 (365)
Q Consensus       293 ~~---~------~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~~  331 (365)
                      ++   +      -+...+|+|++++.++...  ..|..|....|++..
T Consensus       204 ~i~v~~~g~~~r~~i~v~D~a~ai~~~~~~~--~~~~~~ni~~~~~~s  249 (322)
T d1r6da_         204 TLPLYGDGANVREWVHTDDHCRGIALVLAGG--RAGEIYHIGGGLELT  249 (322)
T ss_dssp             CEEEETTSCCEEEEEEHHHHHHHHHHHHHHC--CTTCEEEECCCCEEE
T ss_pred             CcEEecCCCeEEccEEHHHHHHHHHHHHhCC--CCCCeeEEeecccch
Confidence            11   0      1358899999999655432  346666666777764

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=9.2e-15  Score=126.59  Aligned_cols=201  Identities=12%  Similarity=0.105  Sum_probs=135.2

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~--~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      |++|+||||||||.||.+++++|.++|.  +|++++|++.....      ..  ...+....+|+.+.+++.+.      
T Consensus        12 m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~------~~--~~~i~~~~~D~~~~~~~~~~------   77 (232)
T d2bkaa1          12 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDE------EA--YKNVNQEVVDFEKLDDYASA------   77 (232)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCS------GG--GGGCEEEECCGGGGGGGGGG------
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcc------cc--cceeeeeeeccccccccccc------
Confidence            5689999999999999999999999995  89999998653221      01  23567777888887765432      


Q ss_pred             HHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017812          135 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  214 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~  214 (365)
                             ....|++||++|...     .........++|+.++..+++.+..    .+ -.++|++||....        
T Consensus        78 -------~~~~d~vi~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~a~~----~~-v~~fi~~Ss~~~~--------  132 (232)
T d2bkaa1          78 -------FQGHDVGFCCLGTTR-----GKAGAEGFVRVDRDYVLKSAELAKA----GG-CKHFNLLSSKGAD--------  132 (232)
T ss_dssp             -------GSSCSEEEECCCCCH-----HHHHHHHHHHHHTHHHHHHHHHHHH----TT-CCEEEEECCTTCC--------
T ss_pred             -------ccccccccccccccc-----cccchhhhhhhcccccceeeecccc----cC-ccccccCCccccc--------
Confidence                   245899999999642     1334456678999999998888744    22 4689999998755        


Q ss_pred             CccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCe-EEEEecCCcccCCccccchhHHHHHHHHHHHH
Q 017812          215 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHV-SVIAADPGVVKTNIMREVPSFLSLMAFTVLKL  293 (365)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi-~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  293 (365)
                                    ......|+.+|...+...+    ++      +. ++..++||.+..+.....+..  ........+
T Consensus       133 --------------~~~~~~Y~~~K~~~E~~l~----~~------~~~~~~IlRP~~i~G~~~~~~~~~--~~~~~~~~~  186 (232)
T d2bkaa1         133 --------------KSSNFLYLQVKGEVEAKVE----EL------KFDRYSVFRPGVLLCDRQESRPGE--WLVRKFFGS  186 (232)
T ss_dssp             --------------TTCSSHHHHHHHHHHHHHH----TT------CCSEEEEEECCEEECTTGGGSHHH--HHHHHHHCS
T ss_pred             --------------cCccchhHHHHHHhhhccc----cc------cccceEEecCceeecCCCcCcHHH--HHHHHHhhc
Confidence                          1223569999988775432    22      22 477899999987754322111  111111111


Q ss_pred             ------hcCCCCHHHHHHHHHHHhcCCCCCcccEEe
Q 017812          294 ------LGLLQSPEKGINSVLDAALAPPETSGVYFF  323 (365)
Q Consensus       294 ------~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~  323 (365)
                            .....+++|+|+++++++..+. ..+.+++
T Consensus       187 ~~~~~~~~~~I~~~dvA~a~i~~~~~~~-~~~~~i~  221 (232)
T d2bkaa1         187 LPDSWASGHSVPVVTVVRAMLNNVVRPR-DKQMELL  221 (232)
T ss_dssp             CCTTGGGGTEEEHHHHHHHHHHHHTSCC-CSSEEEE
T ss_pred             cCCcccCCCeEEHHHHHHHHHHHHhcCc-cCCeEEE
Confidence                  1133577999999998775554 3455554

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.56  E-value=8.9e-14  Score=129.24  Aligned_cols=192  Identities=14%  Similarity=0.009  Sum_probs=134.0

Q ss_pred             CEEEEecCCChHHHHHHHHHHH-CCCEEEEEec---------CchhHHHHHHHHHhh------cCCCceEEEEecCCChh
Q 017812           60 PVCIVTGATSGLGAAAAYALSR-EGFHVVLVGR---------SSHLLSETMADITSR------NKDARLEAFQVDLSSFQ  123 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~-~G~~Vil~~r---------~~~~~~~~~~~l~~~------~~~~~~~~~~~Dls~~~  123 (365)
                      ..||||||+|.||.+++++|++ .|++|+++++         ..+..++....+...      ..+..+.++.+|++|.+
T Consensus         3 MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~   82 (383)
T d1gy8a_           3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNED   82 (383)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCHH
Confidence            3599999999999999999986 6899999874         223334444444332      12346789999999999


Q ss_pred             hHHHHHHHHHHHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCC
Q 017812          124 SVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSF  203 (365)
Q Consensus       124 ~v~~~~~~~~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~  203 (365)
                      .++++++.          ..++|+++|.|+.....  ...+.....+++|+.++..+++++...-     ..++++++|.
T Consensus        83 ~l~~~~~~----------~~~~d~ViH~Aa~~~~~--~~~~~~~~~~~~N~~~t~~~l~~~~~~~-----~~~~~~~~s~  145 (383)
T d1gy8a_          83 FLNGVFTR----------HGPIDAVVHMCAFLAVG--ESVRDPLKYYDNNVVGILRLLQAMLLHK-----CDKIIFSSSA  145 (383)
T ss_dssp             HHHHHHHH----------SCCCCEEEECCCCCCHH--HHHHCHHHHHHHHHHHHHHHHHHHHHTT-----CCEEEEEEEG
T ss_pred             Hhhhhhhc----------cceeehhhccccccccc--ccccccccccccccccccccchhhhccC-----Cccccccccc
Confidence            98888764          35699999999975321  1234456788999999999998886542     3578887777


Q ss_pred             cccccccccCCCccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCcc
Q 017812          204 THRNVFNAQVNNETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIM  276 (365)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~  276 (365)
                      ..+........  ........+..+..+...|+.||.+.+.+++.+...      .|+.+.+++|+.+-.+..
T Consensus       146 ~~~~~~~~~~~--~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~------~gl~~~~lR~~~vyG~~~  210 (383)
T d1gy8a_         146 AIFGNPTMGSV--STNAEPIDINAKKSPESPYGESKLIAERMIRDCAEA------YGIKGICLRYFNACGAHE  210 (383)
T ss_dssp             GGTBSCCC-------CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHH------HCCEEEEEEECEEECCCT
T ss_pred             ccccccccccc--cccccccccccCCCCCCHHHhhHhHHHHHHHHHHHH------hCCCEEEEecceeeccCc
Confidence            66533221110  011111222255667789999999999999988775      478999999998876543

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.55  E-value=5.5e-15  Score=127.84  Aligned_cols=210  Identities=13%  Similarity=-0.018  Sum_probs=131.5

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~--~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      ++||||||||+||++++++|+++|+  +|+...|++++.+.    +     ..+++++.+|+++.+++.++++       
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~----~-----~~~~~~~~~d~~~~~~~~~~~~-------   67 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEK----I-----GGEADVFIGDITDADSINPAFQ-------   67 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHH----T-----TCCTTEEECCTTSHHHHHHHHT-------
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHh----c-----cCCcEEEEeeeccccccccccc-------
Confidence            6999999999999999999999996  56677888765432    1     3467899999999988776542       


Q ss_pred             ccCCCCCeeEEEecCCcccCCC-----------CCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccc
Q 017812          138 DSDMHSSIQLLINNAGILATSS-----------RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHR  206 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~~~-----------~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~  206 (365)
                            .+|.+||+|+......           ............+|+.++..+........     .+...+.|+....
T Consensus        68 ------~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~s~~~~~  136 (252)
T d2q46a1          68 ------GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAG-----VKHIVVVGSMGGT  136 (252)
T ss_dssp             ------TCSEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHT-----CSEEEEEEETTTT
T ss_pred             ------cceeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeecccccccc-----ccccccccccccC
Confidence                  4899999998753110           11223455677889999988877665543     4677777776654


Q ss_pred             ccccccCCCccccccccccCCCCChhhhhhhhHH-HHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHH
Q 017812          207 NVFNAQVNNETITGKFFLRSKCYPCARIYEYSKL-CLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSL  285 (365)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~-a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~  285 (365)
                                          .+..+...|..++. ........+..      ..|+.+..++||.+..+...........
T Consensus       137 --------------------~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ilRp~~v~g~~~~~~~~~~~~  190 (252)
T d2q46a1         137 --------------------NPDHPLNKLGNGNILVWKRKAEQYLA------DSGTPYTIIRAGGLLDKEGGVRELLVGK  190 (252)
T ss_dssp             --------------------CTTCGGGGGGGCCHHHHHHHHHHHHH------HSSSCEEEEEECEEECSCTTSSCEEEES
T ss_pred             --------------------CCCcccccccccchhhhhhhhhhhhh------cccccceeecceEEECCCcchhhhhhcc
Confidence                                22222222333222 22222222222      4688999999999976643221100000


Q ss_pred             HHHHHHHHhcCCCCHHHHHHHHHHHhcCCCCCcccEEeC
Q 017812          286 MAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFG  324 (365)
Q Consensus       286 ~~~~~~~~~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~  324 (365)
                      ... .......+.+++|+|++++.++ ..+...|+.|..
T Consensus       191 ~~~-~~~~~~~~i~~~Dva~a~~~~l-~~~~~~g~~~~i  227 (252)
T d2q46a1         191 DDE-LLQTDTKTVPRADVAEVCIQAL-LFEEAKNKAFDL  227 (252)
T ss_dssp             TTG-GGGSSCCEEEHHHHHHHHHHHT-TCGGGTTEEEEE
T ss_pred             Ccc-cccCCCCeEEHHHHHHHHHHHh-CCccccCcEEEE
Confidence            000 0000113458999999999755 445566776654

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.33  E-value=8.3e-13  Score=118.29  Aligned_cols=215  Identities=8%  Similarity=0.032  Sum_probs=119.4

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhcc
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  139 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~  139 (365)
                      +.||||||||.||++++++|.++|++|++++|+.........+.........+.++++|++|.+++.+.+.         
T Consensus         4 ~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~---------   74 (312)
T d1qyda_           4 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALK---------   74 (312)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHT---------
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhcc---------
Confidence            45999999999999999999999999999999764321111111111113468899999999888766442         


Q ss_pred             CCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcccc
Q 017812          140 DMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETIT  219 (365)
Q Consensus       140 ~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~~~  219 (365)
                          ..+.++++++....             ..|..+...++.++.    +.. ..++++.||.+.....          
T Consensus        75 ----~~~~~~~~~~~~~~-------------~~~~~~~~~~l~~a~----~~~-~~~~v~~Ss~g~~~~~----------  122 (312)
T d1qyda_          75 ----QVDVVISALAGGVL-------------SHHILEQLKLVEAIK----EAG-NIKRFLPSEFGMDPDI----------  122 (312)
T ss_dssp             ----TCSEEEECCCCSSS-------------STTTTTHHHHHHHHH----HSC-CCSEEECSCCSSCTTS----------
T ss_pred             ----Ccchhhhhhhhccc-------------ccchhhhhHHHHHHH----Hhc-CCcEEEEeeccccCCC----------
Confidence                36778888775322             123333334444432    222 3567777775433110          


Q ss_pred             ccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhH-------HHHHH-HHHH
Q 017812          220 GKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSF-------LSLMA-FTVL  291 (365)
Q Consensus       220 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~-------~~~~~-~~~~  291 (365)
                           ...+..+...|..+|.....    ...      ..++..+.++||.+..+........       ..... ....
T Consensus       123 -----~~~~~~~~~~~~~~~~~~~~----~~~------~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g  187 (312)
T d1qyda_         123 -----MEHALQPGSITFIDKRKVRR----AIE------AASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDG  187 (312)
T ss_dssp             -----CCCCCSSTTHHHHHHHHHHH----HHH------HTTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTS
T ss_pred             -----cccccchhhhhhHHHHHHHH----hhc------ccccceEEeccceeecCCccchhhHHHHhhhccccccccccc
Confidence                 00223334455556555443    222      3466777788887743211110000       00000 0000


Q ss_pred             HHhcCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017812          292 KLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  330 (365)
Q Consensus       292 ~~~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~  330 (365)
                      ....-+.+++|+|++++.++..++..++.++....++.+
T Consensus       188 ~~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~~  226 (312)
T d1qyda_         188 NVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNIL  226 (312)
T ss_dssp             CSEEEEECHHHHHHHHHHHTTCGGGSSSEEECCCGGGEE
T ss_pred             ccccceeeHHHHHHHHHHHhcCccccCceEEEeCCCcCC
Confidence            001124699999999997665554445556655555544

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.31  E-value=7.1e-12  Score=110.63  Aligned_cols=206  Identities=17%  Similarity=0.094  Sum_probs=130.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhccC
Q 017812           61 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  140 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~~  140 (365)
                      .||||||||.||.+++++|.++|++|+.++|+.                       +|++|.++++++++..        
T Consensus         3 KIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~-----------------------~D~~d~~~~~~~l~~~--------   51 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGKNVEVIPTDVQD-----------------------LDITNVLAVNKFFNEK--------   51 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT-----------------------CCTTCHHHHHHHHHHH--------
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeechh-----------------------ccCCCHHHHHHHHHHc--------
Confidence            389999999999999999999999999999853                       4899999888777642        


Q ss_pred             CCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCccccc
Q 017812          141 MHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITG  220 (365)
Q Consensus       141 ~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~~~~  220 (365)
                         .+|++||+|+....  .......+..+..|......+.......      ...+++.||...+.......       
T Consensus        52 ---~~d~vih~a~~~~~--~~~~~~~~~~~~~n~~~~~~~~~~~~~~------~~~~~~~ss~~v~~~~~~~~-------  113 (281)
T d1vl0a_          52 ---KPNVVINCAAHTAV--DKCEEQYDLAYKINAIGPKNLAAAAYSV------GAEIVQISTDYVFDGEAKEP-------  113 (281)
T ss_dssp             ---CCSEEEECCCCCCH--HHHHHCHHHHHHHHTHHHHHHHHHHHHH------TCEEEEEEEGGGSCSCCSSC-------
T ss_pred             ---CCCEEEeecccccc--ccccccchhhcccccccccccccccccc------cccccccccceeeecccccc-------
Confidence               48999999987432  1123344667778888887776666444      24677777765543221111       


Q ss_pred             cccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHHHHHHH-----HHhc
Q 017812          221 KFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLMAFTVL-----KLLG  295 (365)
Q Consensus       221 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~-----~~~~  295 (365)
                        ..+..+..+...|+.+|.+.+.+.+.          .+.....+.|+.+-.+-................     ...+
T Consensus       114 --~~e~~~~~~~~~~~~~k~~~e~~~~~----------~~~~~~i~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (281)
T d1vl0a_         114 --ITEFDEVNPQSAYGKTKLEGENFVKA----------LNPKYYIVRTAWLYGDGNNFVKTMINLGKTHDELKVVHDQVG  181 (281)
T ss_dssp             --BCTTSCCCCCSHHHHHHHHHHHHHHH----------HCSSEEEEEECSEESSSSCHHHHHHHHHHHCSEEEEESSCEE
T ss_pred             --ccccccccchhhhhhhhhHHHHHHHH----------hCCCccccceeEEeCCCcccccchhhhhccCCceeecCCcee
Confidence              11113455677899999887765532          234577899999976643211111110000000     0001


Q ss_pred             CCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017812          296 LLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  330 (365)
Q Consensus       296 ~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~  330 (365)
                      -+...+|+++++..++..  ..+|.|.. .+++.+
T Consensus       182 ~~i~v~D~~~~~~~~~~~--~~~g~~~~-~~~~~~  213 (281)
T d1vl0a_         182 TPTSTVDLARVVLKVIDE--KNYGTFHC-TCKGIC  213 (281)
T ss_dssp             CCEEHHHHHHHHHHHHHH--TCCEEEEC-CCBSCE
T ss_pred             ccchhhhhhhhhhhhhhh--cccCceeE-eCCCcc
Confidence            346899999999965533  33465554 444555

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.30  E-value=1.8e-12  Score=110.12  Aligned_cols=191  Identities=14%  Similarity=0.075  Sum_probs=118.9

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~--~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      .|.++||||||.||++++++|.++|.  +|+...|++..            ...+   +..+..|..++   .+.     
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~------------~~~~---~~~~~~d~~~~---~~~-----   58 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA------------EHPR---LDNPVGPLAEL---LPQ-----   58 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC------------CCTT---EECCBSCHHHH---GGG-----
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh------------hccc---ccccccchhhh---hhc-----
Confidence            37899999999999999999999997  77777776421            0122   33444444332   111     


Q ss_pred             hccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017812          137 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  216 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~  216 (365)
                          ....+|++|+++|.....    ...-+...++|+.++..+++++..    .+ ..+++++||..+.          
T Consensus        59 ----~~~~~d~vi~~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~a~~----~~-v~~~i~~Ss~~~~----------  115 (212)
T d2a35a1          59 ----LDGSIDTAFCCLGTTIKE----AGSEEAFRAVDFDLPLAVGKRALE----MG-ARHYLVVSALGAD----------  115 (212)
T ss_dssp             ----CCSCCSEEEECCCCCHHH----HSSHHHHHHHHTHHHHHHHHHHHH----TT-CCEEEEECCTTCC----------
T ss_pred             ----cccchheeeeeeeeeccc----cccccccccchhhhhhhccccccc----cc-ccccccccccccc----------
Confidence                345689999999875221    122356788999999998887643    22 4689999998765          


Q ss_pred             cccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCe-EEEEecCCcccCCccccc-hhHH----HHHHHHH
Q 017812          217 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHV-SVIAADPGVVKTNIMREV-PSFL----SLMAFTV  290 (365)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi-~v~~v~PG~v~T~~~~~~-~~~~----~~~~~~~  290 (365)
                                  ......|..+|...+...+    +      .+. +.+.++|+.|-.+..... ....    .......
T Consensus       116 ------------~~~~~~y~~~K~~~E~~l~----~------~~~~~~~I~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~  173 (212)
T d2a35a1         116 ------------AKSSIFYNRVKGELEQALQ----E------QGWPQLTIARPSLLFGPREEFRLAEILAAPIARILPGK  173 (212)
T ss_dssp             ------------TTCSSHHHHHHHHHHHHHT----T------SCCSEEEEEECCSEESTTSCEEGGGGTTCCCC----CH
T ss_pred             ------------cccccchhHHHHHHhhhcc----c------cccccceeeCCcceeCCcccccHHHHHHHHHhhccCCC
Confidence                        2234569999987765432    2      222 577889999866543211 0000    0000000


Q ss_pred             HHHhcCCCCHHHHHHHHHHHhcCCCCCcccEEe
Q 017812          291 LKLLGLLQSPEKGINSVLDAALAPPETSGVYFF  323 (365)
Q Consensus       291 ~~~~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~  323 (365)
                      ..    +...+|+|++++.++..  ...|..++
T Consensus       174 ~~----~i~v~DvA~ai~~~~~~--~~~g~~~~  200 (212)
T d2a35a1         174 YH----GIEACDLARALWRLALE--EGKGVRFV  200 (212)
T ss_dssp             HH----HHHHHHHHHHHHHHHTC--CCSEEEEE
T ss_pred             Cc----EEEHHHHHHHHHHHHcC--CCCCCEEE
Confidence            11    23789999999976543  33455543

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.19  E-value=2.1e-11  Score=108.18  Aligned_cols=139  Identities=14%  Similarity=0.031  Sum_probs=96.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhccC
Q 017812           61 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  140 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~~  140 (365)
                      .||||||+|.||.+++++|.++|.. +.++++...                   +..|++|.+.++++++..        
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~~-v~~~~~~~~-------------------~~~Dl~~~~~~~~~i~~~--------   53 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGNL-IALDVHSKE-------------------FCGDFSNPKGVAETVRKL--------   53 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSEE-EEECTTCSS-------------------SCCCTTCHHHHHHHHHHH--------
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCE-EEEECCCcc-------------------ccCcCCCHHHHHHHHHHc--------
Confidence            3999999999999999999998864 444544321                   347999999888877643        


Q ss_pred             CCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCccccc
Q 017812          141 MHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITG  220 (365)
Q Consensus       141 ~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~~~~  220 (365)
                         ++|+|||.||......  +.+.-+..+++|+.++..+.+++...      ..+++++||...+......        
T Consensus        54 ---~~D~Vih~Aa~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~~~~ss~~~~~~~~~~--------  114 (298)
T d1n2sa_          54 ---RPDVIVNAAAHTAVDK--AESEPELAQLLNATSVEAIAKAANET------GAWVVHYSTDYVFPGTGDI--------  114 (298)
T ss_dssp             ---CCSEEEECCCCCCHHH--HTTCHHHHHHHHTHHHHHHHHHHTTT------TCEEEEEEEGGGSCCCTTC--------
T ss_pred             ---CCCEEEEecccccccc--cccCccccccccccccccchhhhhcc------ccccccccccccccCCCCC--------
Confidence               4899999999753211  22334678899999999998887432      3678888887655222111        


Q ss_pred             cccccCCCCChhhhhhhhHHHHHHHHH
Q 017812          221 KFFLRSKCYPCARIYEYSKLCLLIFSY  247 (365)
Q Consensus       221 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~  247 (365)
                       .+.+..+..+...|+.+|.+.+.+.+
T Consensus       115 -~~~E~~~~~p~~~y~~~k~~~e~~~~  140 (298)
T d1n2sa_         115 -PWQETDATSPLNVYGKTKLAGEKALQ  140 (298)
T ss_dssp             -CBCTTSCCCCSSHHHHHHHHHHHHHH
T ss_pred             -CCccccccCCCchHhhhhhhhhhhHH
Confidence             11122445567889999988876553

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.14  E-value=3.4e-11  Score=106.83  Aligned_cols=210  Identities=13%  Similarity=0.050  Sum_probs=115.4

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHH--HHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLS--ETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~--~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      .|.||||||||.||++++++|.++|++|++++|+.....  +....+.... ...+.++..|+.+.....+.++      
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~------   75 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK-ASGANIVHGSIDDHASLVEAVK------   75 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHH-TTTCEEECCCTTCHHHHHHHHH------
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhc-cCCcEEEEeecccchhhhhhhh------
Confidence            467999999999999999999999999999999764321  1112222221 3457889999999887655443      


Q ss_pred             hccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCc
Q 017812          137 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNE  216 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~  216 (365)
                             ..+.++++++....                 .+...+.+++...    . ..++++.||.......       
T Consensus        76 -------~~~~vi~~~~~~~~-----------------~~~~~~~~a~~~~----~-~~~~~~~s~~~~~~~~-------  119 (307)
T d1qyca_          76 -------NVDVVISTVGSLQI-----------------ESQVNIIKAIKEV----G-TVKRFFPSEFGNDVDN-------  119 (307)
T ss_dssp             -------TCSEEEECCCGGGS-----------------GGGHHHHHHHHHH----C-CCSEEECSCCSSCTTS-------
T ss_pred             -------hceeeeeccccccc-----------------chhhHHHHHHHHh----c-cccceeeecccccccc-------
Confidence                   37788888875321                 1222223333222    2 3466776665433000       


Q ss_pred             cccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCccccchhHHHHH-------HHH
Q 017812          217 TITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNIMREVPSFLSLM-------AFT  289 (365)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~-------~~~  289 (365)
                               .........|...+....    ....+      .++..+.++|+.+..+....+.......       ...
T Consensus       120 ---------~~~~~~~~~~~~~~~~~~----~~~~~------~~~~~~i~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~  180 (307)
T d1qyca_         120 ---------VHAVEPAKSVFEVKAKVR----RAIEA------EGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILG  180 (307)
T ss_dssp             ---------CCCCTTHHHHHHHHHHHH----HHHHH------HTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEET
T ss_pred             ---------cccccccccccccccccc----chhhc------cCCCceecccceecCCCccchhhhhhhhhhcccceeee
Confidence                     011222233333443332    22222      3566778888877543221110000000       000


Q ss_pred             HHHHhcCCCCHHHHHHHHHHHhcCCCCCcccEEeCCCCccc
Q 017812          290 VLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTV  330 (365)
Q Consensus       290 ~~~~~~~~~~p~e~A~~i~~~~l~~~~~~G~~~~~~~g~~~  330 (365)
                      .......+...+|+|++++.++..++..++.++....++.+
T Consensus       181 ~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~~~~~~~~~  221 (307)
T d1qyca_         181 DGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTL  221 (307)
T ss_dssp             TSCCEEEEECHHHHHHHHHTTSSCGGGTTEEEECCCGGGEE
T ss_pred             cccccccCCcHHHHHHHHHHHhcChhhcCceeEEeCCCCcc
Confidence            00001134699999999996554444455556655555655

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.05  E-value=3.6e-10  Score=100.36  Aligned_cols=172  Identities=13%  Similarity=0.138  Sum_probs=104.2

Q ss_pred             EEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhccC
Q 017812           62 CIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  140 (365)
Q Consensus        62 vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~~  140 (365)
                      ||||||||.||.+++++|+++|+ .|+.+++-... .+.. .+.           ..++.+........+.....    .
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~-~~~~-~~~-----------~~~~~~~~~~~~~~~~~~~~----~   64 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDG-TKFV-NLV-----------DLNIADYMDKEDFLIQIMAG----E   64 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSG-GGGH-HHH-----------TSCCSEEEEHHHHHHHHHTT----C
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCc-chhh-ccc-----------ccchhhhccchHHHHHHhhh----h
Confidence            89999999999999999999997 57777532211 1111 111           11222222222333333221    1


Q ss_pred             CCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCccccc
Q 017812          141 MHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETITG  220 (365)
Q Consensus       141 ~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~~~~  220 (365)
                      ....+++++|.|+.....    ....+...++|+.++..+.+++...-      -++++.||..............    
T Consensus        65 ~~~~~~~i~~~aa~~~~~----~~~~~~~~~~~~~~~~~~l~~~~~~~------i~~v~~ss~~~~~~~~~~~~~~----  130 (307)
T d1eq2a_          65 EFGDVEAIFHEGACSSTT----EWDGKYMMDNNYQYSKELLHYCLERE------IPFLYASSAATYGGRTSDFIES----  130 (307)
T ss_dssp             CCSSCCEEEECCSCCCTT----CCCHHHHHHHTHHHHHHHHHHHHHHT------CCEEEEEEGGGGTTCCSCBCSS----
T ss_pred             cccchhhhhhhccccccc----cccccccccccccccccccccccccc------cccccccccccccccccccccc----
Confidence            456788999998864322    22345567888888888877765442      3455555555443222111111    


Q ss_pred             cccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCCc
Q 017812          221 KFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTNI  275 (365)
Q Consensus       221 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~~  275 (365)
                           ..+.++...|+.+|.+.+.+++.++.+      .++.+..++|..+-.|.
T Consensus       131 -----~~~~~~~~~Y~~~K~~~e~~~~~~~~~------~~~~~~~~r~~~vyGp~  174 (307)
T d1eq2a_         131 -----REYEKPLNVYGYSKFLFDEYVRQILPE------ANSQIVGFRYFNVYGPR  174 (307)
T ss_dssp             -----GGGCCCSSHHHHHHHHHHHHHHHHGGG------CSSCEEEEEECEEESSS
T ss_pred             -----ccccccccccccccchhhhhccccccc------cccccccccceeEeecc
Confidence                 123455678999999999998887653      57788888888887654

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=98.92  E-value=1.1e-08  Score=92.86  Aligned_cols=153  Identities=16%  Similarity=0.049  Sum_probs=94.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      +.|+|+||||||.||.+++++|.++|++|+++.|+.++...  ..+..   ...+.++++|+.|..++.+   .+.    
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~--~~~~~---~~~v~~~~gD~~d~~~~~~---~a~----   69 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA--EELQA---IPNVTLFQGPLLNNVPLMD---TLF----   69 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH--HHHHT---STTEEEEESCCTTCHHHHH---HHH----
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhh--hhhcc---cCCCEEEEeeCCCcHHHHH---HHh----
Confidence            46899999999999999999999999999999999876432  22222   3468899999998665322   221    


Q ss_pred             ccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCCCcc
Q 017812          138 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNET  217 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~~~~  217 (365)
                           ...|.++.+.....              ..|+.....++.++.    +.+ ..++++.||......         
T Consensus        70 -----~~~~~~~~~~~~~~--------------~~~~~~~~~~~~aa~----~ag-v~~~v~~Ss~~~~~~---------  116 (350)
T d1xgka_          70 -----EGAHLAFINTTSQA--------------GDEIAIGKDLADAAK----RAG-TIQHYIYSSMPDHSL---------  116 (350)
T ss_dssp             -----TTCSEEEECCCSTT--------------SCHHHHHHHHHHHHH----HHS-CCSEEEEEECCCGGG---------
T ss_pred             -----cCCceEEeeccccc--------------chhhhhhhHHHHHHH----HhC-CCceEEEeecccccc---------
Confidence                 34677666543211              112233334444442    222 347777787654311         


Q ss_pred             ccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEecCCcccCC
Q 017812          218 ITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAADPGVVKTN  274 (365)
Q Consensus       218 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~PG~v~T~  274 (365)
                               .+......|..+|...+.+.+          ..++....+.||.+..+
T Consensus       117 ---------~~~~~~~~~~~~k~~~~~~~~----------~~~~~~~~vr~~~~~~~  154 (350)
T d1xgka_         117 ---------YGPWPAVPMWAPKFTVENYVR----------QLGLPSTFVYAGIYNNN  154 (350)
T ss_dssp             ---------TSSCCCCTTTHHHHHHHHHHH----------TSSSCEEEEEECEEGGG
T ss_pred             ---------CCcccchhhhhhHHHHHHHHH----------hhccCceeeeeceeecc
Confidence                     222233456677766554332          34566778888876443

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.90  E-value=8.9e-14  Score=116.75  Aligned_cols=49  Identities=22%  Similarity=0.274  Sum_probs=43.9

Q ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCC
Q 017812           61 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKD  109 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~  109 (365)
                      ++.|+||+|+||+++|+.|++.|++|++++|++++++++.+++....+.
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~~~~~   50 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGD   50 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSS
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCC
Confidence            3678888899999999999999999999999999999999999876543

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=98.33  E-value=2e-06  Score=70.08  Aligned_cols=105  Identities=12%  Similarity=0.109  Sum_probs=72.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      +|.+|+|+||+||+|...+.-....|++|+.+++++++.+.+.+    .  +....   +|-.+.+..+...+..     
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~----~--Ga~~v---i~~~~~~~~~~~~~~~-----   94 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQ----I--GFDAA---FNYKTVNSLEEALKKA-----   94 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----T--TCSEE---EETTSCSCHHHHHHHH-----
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHHh----h--hhhhh---cccccccHHHHHHHHh-----
Confidence            48999999999999999999999999999999999877544332    2  32222   3444444443333322     


Q ss_pred             ccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccc
Q 017812          138 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHR  206 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~  206 (365)
                         ...++|+++++.|-                        -..+..++.++.   .|+++.++...+.
T Consensus        95 ---~~~Gvd~v~D~vG~------------------------~~~~~~~~~l~~---~G~~v~~G~~~~~  133 (182)
T d1v3va2          95 ---SPDGYDCYFDNVGG------------------------EFLNTVLSQMKD---FGKIAICGAISVY  133 (182)
T ss_dssp             ---CTTCEEEEEESSCH------------------------HHHHHHGGGEEE---EEEEEECCCGGGT
T ss_pred             ---hcCCCceeEEecCc------------------------hhhhhhhhhccC---CCeEEeecceeec
Confidence               34679999999983                        123345566654   5899999876654

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.29  E-value=2.3e-06  Score=69.12  Aligned_cols=79  Identities=15%  Similarity=0.246  Sum_probs=55.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .|++|+|+||+|++|...+......|++|+++++++++.+.+. +   .  +.. .  .+|.++.+-.+    ++++.. 
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~-~---~--Ga~-~--vi~~~~~~~~~----~i~~~t-   93 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVL-Q---N--GAH-E--VFNHREVNYID----KIKKYV-   93 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-H---T--TCS-E--EEETTSTTHHH----HHHHHH-
T ss_pred             CCCEEEEEeccccccccccccccccCccccccccccccccccc-c---c--Ccc-c--ccccccccHHH----Hhhhhh-
Confidence            4889999999999999999998899999999999887654432 2   2  322 1  24666654333    333322 


Q ss_pred             ccCCCCCeeEEEecCC
Q 017812          138 DSDMHSSIQLLINNAG  153 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG  153 (365)
                         ...++|+++.+.|
T Consensus        94 ---~~~g~d~v~d~~g  106 (174)
T d1yb5a2          94 ---GEKGIDIIIEMLA  106 (174)
T ss_dssp             ---CTTCEEEEEESCH
T ss_pred             ---ccCCceEEeeccc
Confidence               2356999999877

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=98.19  E-value=6.4e-06  Score=67.42  Aligned_cols=113  Identities=15%  Similarity=0.126  Sum_probs=72.5

Q ss_pred             CCEEEE-ecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           59 RPVCIV-TGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        59 ~k~vlI-TGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      |++++| +||+||+|.+.+.-....|++|+.+.|+.++.++..+.+++.+.  . +++.-|-.+..+..+.+.++...  
T Consensus        29 g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGa--d-~vi~~~~~~~~~~~~~v~~~~~~--  103 (189)
T d1gu7a2          29 GKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGA--T-QVITEDQNNSREFGPTIKEWIKQ--  103 (189)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTC--S-EEEEHHHHHCGGGHHHHHHHHHH--
T ss_pred             CCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhccc--c-EEEeccccchhHHHHHHHHHHhh--
Confidence            554554 79999999999988888899999999998888877777776642  2 22322222223333334443321  


Q ss_pred             ccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccc
Q 017812          138 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHR  206 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~  206 (365)
                         ..+++|+++++.|-         +.               +...+..+..   .|++|.+++.++.
T Consensus       104 ---~g~~vdvv~D~vg~---------~~---------------~~~~~~~l~~---~G~~v~~G~~~~~  142 (189)
T d1gu7a2         104 ---SGGEAKLALNCVGG---------KS---------------STGIARKLNN---NGLMLTYGGMSFQ  142 (189)
T ss_dssp             ---HTCCEEEEEESSCH---------HH---------------HHHHHHTSCT---TCEEEECCCCSSC
T ss_pred             ---ccCCceEEEECCCc---------ch---------------hhhhhhhhcC---CcEEEEECCccCC
Confidence               23579999998873         11               1223344433   5899999876643

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.17  E-value=3.7e-06  Score=68.36  Aligned_cols=79  Identities=15%  Similarity=0.141  Sum_probs=55.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .|++|+|+||+|++|...+..+...|++|+++++++++.+.    +++.  +.. +  ..|-.+.+ +.   +++++.. 
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~----l~~~--Ga~-~--vi~~~~~~-~~---~~v~~~t-   90 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREM----LSRL--GVE-Y--VGDSRSVD-FA---DEILELT-   90 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHH----HHTT--CCS-E--EEETTCST-HH---HHHHHHT-
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceeeecccccccc----cccc--ccc-c--cccCCccC-HH---HHHHHHh-
Confidence            47899999999999999999888899999999998876543    3333  322 2  23545543 22   2333322 


Q ss_pred             ccCCCCCeeEEEecCC
Q 017812          138 DSDMHSSIQLLINNAG  153 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG  153 (365)
                         ...++|+++.+.|
T Consensus        91 ---~~~g~d~v~d~~g  103 (183)
T d1pqwa_          91 ---DGYGVDVVLNSLA  103 (183)
T ss_dssp             ---TTCCEEEEEECCC
T ss_pred             ---CCCCEEEEEeccc
Confidence               2357999999998

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=98.16  E-value=4.9e-06  Score=67.73  Aligned_cols=86  Identities=21%  Similarity=0.257  Sum_probs=64.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      ++++|+|+|.|+ ||.|++++..|++.|+ +++++.|+.++++++.+................|+.+.+++....     
T Consensus        15 ~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-----   88 (182)
T d1vi2a1          15 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEAL-----   88 (182)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHH-----
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhh-----
Confidence            478999999999 7999999999999998 899999998877766554333221234456678888877654432     


Q ss_pred             HHhccCCCCCeeEEEecCCcc
Q 017812          135 WLLDSDMHSSIQLLINNAGIL  155 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~  155 (365)
                              ...|++||+..+.
T Consensus        89 --------~~~diiIN~Tp~G  101 (182)
T d1vi2a1          89 --------ASADILTNGTKVG  101 (182)
T ss_dssp             --------HTCSEEEECSSTT
T ss_pred             --------cccceeccccCCc
Confidence                    2389999998753

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=98.11  E-value=4.2e-06  Score=67.64  Aligned_cols=103  Identities=16%  Similarity=0.122  Sum_probs=67.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .|.+|||+||+||+|.....-....|++|+.+++++++.+.+.+ +     +.+. ++  |-++.  ..+...    .. 
T Consensus        31 ~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~-l-----Ga~~-vi--~~~~~--~~~~~~----~~-   94 (176)
T d1xa0a2          31 ERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRV-L-----GAKE-VL--AREDV--MAERIR----PL-   94 (176)
T ss_dssp             GGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHH-T-----TCSE-EE--ECC---------------C-
T ss_pred             CCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHHh-c-----ccce-ee--ecchh--HHHHHH----Hh-
Confidence            48899999999999999888888899999999999888655432 2     3332 22  22221  111111    11 


Q ss_pred             ccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccc
Q 017812          138 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHR  206 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~  206 (365)
                         ..+++|+++.+.|-.                        .....+..++.   .||+|.+++..+.
T Consensus        95 ---~~~gvD~vid~vgg~------------------------~~~~~l~~l~~---~Griv~~G~~~g~  133 (176)
T d1xa0a2          95 ---DKQRWAAAVDPVGGR------------------------TLATVLSRMRY---GGAVAVSGLTGGA  133 (176)
T ss_dssp             ---CSCCEEEEEECSTTT------------------------THHHHHHTEEE---EEEEEECSCCSSS
T ss_pred             ---hccCcCEEEEcCCch------------------------hHHHHHHHhCC---CceEEEeecccCc
Confidence               346899999999841                        11224444544   5899999998765

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=98.03  E-value=6.2e-05  Score=60.04  Aligned_cols=83  Identities=18%  Similarity=0.209  Sum_probs=57.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .|.+|+|+| +|+||...+..+...|++|+++++++++++.+.+ +     +... .+..|-.+ ++.....+++.+.  
T Consensus        26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~-~-----ga~~-~~~~~~~~-~~~~~~~~~~~~~--   94 (170)
T d1e3ja2          26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN-C-----GADV-TLVVDPAK-EEESSIIERIRSA--   94 (170)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-T-----TCSE-EEECCTTT-SCHHHHHHHHHHH--
T ss_pred             CCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHH-c-----CCcE-EEeccccc-cccchhhhhhhcc--
Confidence            478999997 6899999999999999999999999988755433 2     2222 23333332 2334455555542  


Q ss_pred             ccCCCCCeeEEEecCCc
Q 017812          138 DSDMHSSIQLLINNAGI  154 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~  154 (365)
                         ....+|++|.++|.
T Consensus        95 ---~g~g~D~vid~~g~  108 (170)
T d1e3ja2          95 ---IGDLPNVTIDCSGN  108 (170)
T ss_dssp             ---SSSCCSEEEECSCC
T ss_pred             ---cccCCceeeecCCC
Confidence               23579999999985

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=97.98  E-value=4.5e-06  Score=66.88  Aligned_cols=103  Identities=17%  Similarity=0.104  Sum_probs=67.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      ++.+|||+||+||+|...+.-....|++|+.+++++++.+.+.+.      +.....   |-.+      ...+....  
T Consensus        23 ~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~~l------Gad~vi---~~~~------~~~~~~~~--   85 (167)
T d1tt7a2          23 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQL------GASEVI---SRED------VYDGTLKA--   85 (167)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHH------TCSEEE---EHHH------HCSSCCCS--
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHHhh------cccceE---eccc------hhchhhhc--
Confidence            467899999999999999988888899999999999887654332      333221   2111      11111110  


Q ss_pred             ccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccc
Q 017812          138 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHR  206 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~  206 (365)
                        ...+++|+++.+.|-.                        .....+..+..   .|++|.++..++.
T Consensus        86 --~~~~gvd~vid~vgg~------------------------~~~~~~~~l~~---~G~iv~~G~~~g~  125 (167)
T d1tt7a2          86 --LSKQQWQGAVDPVGGK------------------------QLASLLSKIQY---GGSVAVSGLTGGG  125 (167)
T ss_dssp             --SCCCCEEEEEESCCTH------------------------HHHHHHTTEEE---EEEEEECCCSSCS
T ss_pred             --ccCCCceEEEecCcHH------------------------HHHHHHHHhcc---CceEEEeeccCCC
Confidence              1346799999998841                        22234444544   5899999988764

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.96  E-value=1.4e-05  Score=64.46  Aligned_cols=101  Identities=18%  Similarity=0.180  Sum_probs=66.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      ++.++||+||+||+|...+.-....|++|+.+++++++.+.+ +++     +.+. +  +|-.+.+..+.    +     
T Consensus        31 ~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~-~~l-----Gad~-v--i~~~~~~~~~~----l-----   92 (177)
T d1o89a2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL-KSL-----GASR-V--LPRDEFAESRP----L-----   92 (177)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH-HHH-----TEEE-E--EEGGGSSSCCS----S-----
T ss_pred             CCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHH-Hhh-----cccc-c--cccccHHHHHH----H-----
Confidence            356899999999999999988889999999999999886544 333     3222 2  22222221111    1     


Q ss_pred             ccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccc
Q 017812          138 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHR  206 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~  206 (365)
                         .....|.+|.+.|-         +               .....++.+..   .||||.++...+.
T Consensus        93 ---~~~~~~~vvD~Vgg---------~---------------~~~~~l~~l~~---~Griv~~G~~~~~  131 (177)
T d1o89a2          93 ---EKQVWAGAIDTVGD---------K---------------VLAKVLAQMNY---GGCVAACGLAGGF  131 (177)
T ss_dssp             ---CCCCEEEEEESSCH---------H---------------HHHHHHHTEEE---EEEEEECCCTTCS
T ss_pred             ---HhhcCCeeEEEcch---------H---------------HHHHHHHHhcc---ccceEeecccCCc
Confidence               22457888887763         0               12345555544   5899999987765

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.95  E-value=1.5e-05  Score=64.47  Aligned_cols=80  Identities=11%  Similarity=0.121  Sum_probs=58.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .|++|+|+||+||+|...+.-....|++|+.+++++++.+.++ ++     +..   ..+|-++.+-.++    +++.- 
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~-~l-----Ga~---~vi~~~~~d~~~~----v~~~t-   93 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL-KA-----GAW---QVINYREEDLVER----LKEIT-   93 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HH-----TCS---EEEETTTSCHHHH----HHHHT-
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHH-hc-----CCe---EEEECCCCCHHHH----HHHHh-
Confidence            3789999999999999999999999999999999998875543 22     322   2246666443333    33321 


Q ss_pred             ccCCCCCeeEEEecCCc
Q 017812          138 DSDMHSSIQLLINNAGI  154 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~  154 (365)
                         ....+|+++.+.|-
T Consensus        94 ---~g~g~d~v~d~~g~  107 (179)
T d1qora2          94 ---GGKKVRVVYDSVGR  107 (179)
T ss_dssp             ---TTCCEEEEEECSCG
T ss_pred             ---CCCCeEEEEeCccH
Confidence               23579999999884

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.86  E-value=5e-05  Score=60.02  Aligned_cols=84  Identities=18%  Similarity=0.320  Sum_probs=60.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      +++++.++|.|+ |++|..+++.|..+|+ +|.++.|+.+++++..+++     +..  .  .   +.+++.+.   +. 
T Consensus        21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~-----~~~--~--~---~~~~~~~~---l~-   83 (159)
T d1gpja2          21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL-----GGE--A--V---RFDELVDH---LA-   83 (159)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH-----TCE--E--C---CGGGHHHH---HH-
T ss_pred             CcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhh-----hcc--c--c---cchhHHHH---hc-
Confidence            468999999998 9999999999999998 7999999999988877766     222  1  1   22333332   22 


Q ss_pred             HHhccCCCCCeeEEEecCCcccCCCCCCHHHHh
Q 017812          135 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYD  167 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~  167 (365)
                               ..|++|++.+...+  -++.+.++
T Consensus        84 ---------~~Divi~atss~~~--ii~~~~i~  105 (159)
T d1gpja2          84 ---------RSDVVVSATAAPHP--VIHVDDVR  105 (159)
T ss_dssp             ---------TCSEEEECCSSSSC--CBCHHHHH
T ss_pred             ---------cCCEEEEecCCCCc--cccHhhhH
Confidence                     38999999885333  34555444

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.84  E-value=2.5e-05  Score=63.62  Aligned_cols=104  Identities=13%  Similarity=0.159  Sum_probs=63.2

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCE-EEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFH-VVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~-Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      +++|||+||+||+|...++-....|++ |+.+++++++..++.+++     +..   ...|..+.+ ..+.++++     
T Consensus        31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~-----gad---~vi~~~~~~-~~~~~~~~-----   96 (187)
T d1vj1a2          31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSEL-----GFD---AAVNYKTGN-VAEQLREA-----   96 (187)
T ss_dssp             CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHS-----CCS---EEEETTSSC-HHHHHHHH-----
T ss_pred             CCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcc-----cce---EEeeccchh-HHHHHHHH-----
Confidence            589999999999999988888779985 555677766655555444     322   233555433 33333333     


Q ss_pred             ccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCccc
Q 017812          138 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHR  206 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~  206 (365)
                         ...++|+++.+.|-         +               ..+..++.++.   .||+|.+++.+++
T Consensus        97 ---~~~GvDvv~D~vGg---------~---------------~~~~~~~~l~~---~G~iv~~G~~s~~  135 (187)
T d1vj1a2          97 ---CPGGVDVYFDNVGG---------D---------------ISNTVISQMNE---NSHIILCGQISQY  135 (187)
T ss_dssp             ---CTTCEEEEEESSCH---------H---------------HHHHHHTTEEE---EEEEEEC------
T ss_pred             ---hccCceEEEecCCc---------h---------------hHHHHhhhccc---cccEEEecccccc
Confidence               22569999999883         1               12234445544   5899999887764

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.82  E-value=0.00027  Score=54.89  Aligned_cols=119  Identities=15%  Similarity=0.187  Sum_probs=76.6

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhhcC--CCceEEEEecCCChhhHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRNK--DARLEAFQVDLSSFQSVLKFKDSL  132 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~--~Vil~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dls~~~~v~~~~~~~  132 (365)
                      -.++.|.|.|| |.+|..+|..|+.+|.  +|++.++++++++....++.....  ...+.+...|.   +.        
T Consensus         4 ~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~---~~--------   71 (148)
T d1ldna1           4 NGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY---DD--------   71 (148)
T ss_dssp             TTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG---GG--------
T ss_pred             CCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH---HH--------
Confidence            35677888897 9999999999999985  899999999888777777765321  22333433333   21        


Q ss_pred             HHHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017812          133 QQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  204 (365)
Q Consensus       133 ~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~  204 (365)
                               ...-|++|..||........ .   .+.+..|.    -+.+.+.+.+.+....+.++++|-..
T Consensus        72 ---------l~daDvvvitag~~~~~~~~-R---~dl~~~N~----~i~~~i~~~i~~~~p~a~~ivvtNPv  126 (148)
T d1ldna1          72 ---------CRDADLVVICAGANQKPGET-R---LDLVDKNI----AIFRSIVESVMASGFQGLFLVATNPV  126 (148)
T ss_dssp             ---------TTTCSEEEECCSCCCCTTTC-S---GGGHHHHH----HHHHHHHHHHHHHTCCSEEEECSSSH
T ss_pred             ---------hccceeEEEecccccccCcc-h---hHHHHHHH----HHHHHHHHHHHhhCCCceEEEecCcc
Confidence                     13479999999975332221 1   22344443    44455555555544467788776543

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.81  E-value=1.6e-05  Score=54.44  Aligned_cols=43  Identities=28%  Similarity=0.379  Sum_probs=38.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETM  100 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~  100 (365)
                      ++.+++|+||+||+|......+...|++|+.+.+++++.+-+.
T Consensus        31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~~   73 (77)
T d1o8ca2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLK   73 (77)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH
T ss_pred             CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHHH
Confidence            4789999999999999999988889999999999998876543

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=97.79  E-value=0.0002  Score=55.53  Aligned_cols=120  Identities=14%  Similarity=0.131  Sum_probs=75.6

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhhc--CCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRN--KDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~--~Vil~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      |.+.|.|+ |.+|..+|..|+.+|.  ++++.++++++++....++....  .+........|   .+.+          
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d---~~~l----------   67 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIND---WAAL----------   67 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESC---GGGG----------
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccC---HHHh----------
Confidence            56778895 8999999999999984  89999999998877766776532  22333333333   2222          


Q ss_pred             HhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017812          136 LLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  204 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~  204 (365)
                             ..-|++|..||...+..+-....=.+.++.|    ..+.+.+.+.+.+....+.++++|-..
T Consensus        68 -------~~adiVVitaG~~~~~~~~~g~~R~~l~~~N----~~i~~~i~~~i~~~~p~aivivvtNPv  125 (146)
T d1hyha1          68 -------ADADVVISTLGNIKLQQDNPTGDRFAELKFT----SSMVQSVGTNLKESGFHGVLVVISNPV  125 (146)
T ss_dssp             -------TTCSEEEECCSCGGGTC-------CTTHHHH----HHHHHHHHHHHHHTTCCSEEEECSSSH
T ss_pred             -------ccccEEEEeccccccccccCCccHHHHHHHH----HHHHHHHHHHHhhcCCCeEEEEecCcH
Confidence                   2479999999976432211111112234444    356677777777665467777777543

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.78  E-value=0.00034  Score=55.68  Aligned_cols=81  Identities=21%  Similarity=0.238  Sum_probs=55.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      .|.+|+|.|+ |++|...+..+...|+ +|+++++++++++.+. ++     +.. +++..+-.+..+..+..+.-    
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~-~~-----Ga~-~~~~~~~~~~~~~~~~~~~~----   93 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-EI-----GAD-LVLQISKESPQEIARKVEGQ----   93 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HT-----TCS-EEEECSSCCHHHHHHHHHHH----
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHH-Hh-----CCc-cccccccccccccccccccc----
Confidence            3778999987 9999999999999999 8999999998876543 33     322 23333334444433333322    


Q ss_pred             hccCCCCCeeEEEecCCc
Q 017812          137 LDSDMHSSIQLLINNAGI  154 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~  154 (365)
                          ....+|++|.+.|.
T Consensus        94 ----~g~g~Dvvid~~G~  107 (171)
T d1pl8a2          94 ----LGCKPEVTIECTGA  107 (171)
T ss_dssp             ----HTSCCSEEEECSCC
T ss_pred             ----CCCCceEEEeccCC
Confidence                12579999999995

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.74  E-value=5.6e-05  Score=60.52  Aligned_cols=43  Identities=21%  Similarity=0.270  Sum_probs=37.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETM  100 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~  100 (365)
                      .|++|+|+||+|++|...+......|++|+.+++++++.+.+.
T Consensus        27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~   69 (171)
T d1iz0a2          27 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL   69 (171)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH
T ss_pred             CCCEEEEEeccccchhhhhhhhccccccccccccccccccccc
Confidence            4889999999999999999988889999999999988765543

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.72  E-value=5.1e-05  Score=60.78  Aligned_cols=62  Identities=11%  Similarity=0.146  Sum_probs=47.4

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHH
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLK  127 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~  127 (365)
                      +|.|+|-|| |.+|+.+|++|+++|++|++++|+.++++++.+++      ........+..+......
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~------~~~~~~~~~~~~~~~~~~   63 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV------QHSTPISLDVNDDAALDA   63 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTC------TTEEEEECCTTCHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcc------cccccccccccchhhhHh
Confidence            588999887 99999999999999999999999999887765442      234445555555544433

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.70  E-value=6.4e-05  Score=60.12  Aligned_cols=76  Identities=14%  Similarity=0.139  Sum_probs=57.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      +++||.|+|-|| ||-+++++..|.+.|++|+++.|+.++.+++.+.+...+   .+..  .+..+.             
T Consensus        15 ~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~---~~~~--~~~~~~-------------   75 (170)
T d1nyta1          15 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTG---SIQA--LSMDEL-------------   75 (170)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGS---SEEE--CCSGGG-------------
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcc---cccc--cccccc-------------
Confidence            367999999997 889999999999999999999999999988887775542   2222  222221             


Q ss_pred             HhccCCCCCeeEEEecCCcc
Q 017812          136 LLDSDMHSSIQLLINNAGIL  155 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~  155 (365)
                           .....|++||+..+.
T Consensus        76 -----~~~~~dliIN~Tp~G   90 (170)
T d1nyta1          76 -----EGHEFDLIINATSSG   90 (170)
T ss_dssp             -----TTCCCSEEEECCSCG
T ss_pred             -----cccccceeecccccC
Confidence                 124589999988664

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.68  E-value=6.6e-05  Score=60.67  Aligned_cols=82  Identities=16%  Similarity=0.219  Sum_probs=56.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      .|.+|+|+|| |+||...+..+...|+ +|+++++++++++.+ +++     +.. ++  +|.++. +..+..+++.+..
T Consensus        28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a-~~l-----Ga~-~v--i~~~~~-~~~~~~~~i~~~~   96 (182)
T d1vj0a2          28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLA-EEI-----GAD-LT--LNRRET-SVEERRKAIMDIT   96 (182)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH-HHT-----TCS-EE--EETTTS-CHHHHHHHHHHHT
T ss_pred             CCCEEEEECC-Cccchhheeccccccccccccccccccccccc-ccc-----cce-EE--Eecccc-chHHHHHHHHHhh
Confidence            4899999997 8999999999999998 899999999887544 333     322 22  244432 2333344444422


Q ss_pred             hccCCCCCeeEEEecCCc
Q 017812          137 LDSDMHSSIQLLINNAGI  154 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~  154 (365)
                          ...++|++|.+.|.
T Consensus        97 ----~~~g~Dvvid~vG~  110 (182)
T d1vj0a2          97 ----HGRGADFILEATGD  110 (182)
T ss_dssp             ----TTSCEEEEEECSSC
T ss_pred             ----CCCCceEEeecCCc
Confidence                23469999999986

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.68  E-value=0.00044  Score=54.20  Aligned_cols=119  Identities=21%  Similarity=0.272  Sum_probs=77.3

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhhcC--CCceEEEEecCCChhhHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRNK--DARLEAFQVDLSSFQSVLKFKDSL  132 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~--~Vil~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dls~~~~v~~~~~~~  132 (365)
                      ++...|.|.|+ |.+|..+|..|+.+|.  +++++++++++++....++.....  +........|.   +.+       
T Consensus        17 ~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~---~~~-------   85 (159)
T d2ldxa1          17 LSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDY---NVS-------   85 (159)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSG---GGG-------
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccch---hhh-------
Confidence            44556777896 9999999999999985  899999999888877777765321  22222222332   221       


Q ss_pred             HHHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017812          133 QQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  204 (365)
Q Consensus       133 ~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~  204 (365)
                                ..-|++|..||...... .+.+   +.++.|    ..+.+.+.+.+.+....+.++++|...
T Consensus        86 ----------~~adivvitag~~~~~~-~~R~---dll~~N----~~i~~~i~~~i~~~~p~~ivivvtNPv  139 (159)
T d2ldxa1          86 ----------ANSKLVIITAGARMVSG-QTRL---DLLQRN----VAIMKAIVPGVIQNSPDCKIIVVTNPV  139 (159)
T ss_dssp             ----------TTEEEEEECCSCCCCTT-TCSS---CTTHHH----HHHHHHHTTTHHHHSTTCEEEECSSSH
T ss_pred             ----------ccccEEEEecccccCCC-CCHH---HHHHHH----HHHHHHHHHHHhccCCCeEEEEeCCcH
Confidence                      34899999999853322 2221   123333    345667777777665567888877643

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.60  E-value=8.8e-05  Score=56.55  Aligned_cols=71  Identities=18%  Similarity=0.261  Sum_probs=56.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhccC
Q 017812           61 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  140 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~~  140 (365)
                      .|+|.|+ |.+|+.+|+.|.++|..|+++++|+++.+++.+++       ...++..|.+|++.++++            
T Consensus         2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~-------~~~vi~Gd~~~~~~l~~~------------   61 (132)
T d1lssa_           2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI-------DALVINGDCTKIKTLEDA------------   61 (132)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC-------SSEEEESCTTSHHHHHHT------------
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhh-------hhhhccCcccchhhhhhc------------
Confidence            5899998 88999999999999999999999998887655432       356888999998866553            


Q ss_pred             CCCCeeEEEec
Q 017812          141 MHSSIQLLINN  151 (365)
Q Consensus       141 ~~~~id~lv~n  151 (365)
                      .....|.++..
T Consensus        62 ~i~~a~~vv~~   72 (132)
T d1lssa_          62 GIEDADMYIAV   72 (132)
T ss_dssp             TTTTCSEEEEC
T ss_pred             Chhhhhhhccc
Confidence            22456777754

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=97.59  E-value=0.00055  Score=52.92  Aligned_cols=116  Identities=12%  Similarity=0.179  Sum_probs=71.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCC--CEEEEEecCchhHHHHHHHHHhhc-CCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREG--FHVVLVGRSSHLLSETMADITSRN-KDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G--~~Vil~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      .+.+.|.|+ |.+|..+|..|+.+|  .+|+++++++++++....++.... ..........|.   +++          
T Consensus         5 ~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~---~~~----------   70 (146)
T d1ez4a1           5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY---SDC----------   70 (146)
T ss_dssp             BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG---GGG----------
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccH---HHh----------
Confidence            456888896 999999999999998  489999999988776666665421 122233444443   221          


Q ss_pred             HhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCC
Q 017812          136 LLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSF  203 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~  203 (365)
                             ..-|++|..||..... ..   .-.+.+..|.    .+.+.+.+.+.+....+.++++|-.
T Consensus        71 -------~~adivvitag~~~~~-g~---~r~~l~~~N~----~i~~~~~~~i~~~~p~aivivvtNP  123 (146)
T d1ez4a1          71 -------KDADLVVITAGAPQKP-GE---SRLDLVNKNL----NILSSIVKPVVDSGFDGIFLVAANP  123 (146)
T ss_dssp             -------TTCSEEEECCCC--------------CHHHHH----HHHHHHHHHHHHTTCCSEEEECSSS
T ss_pred             -------ccccEEEEecccccCC-CC---CHHHHHHHHH----HHHHHHHHHHhhcCCCcEEEEeCCc
Confidence                   3479999999975322 11   1223445554    4555666666665545666666643

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.57  E-value=0.00017  Score=57.39  Aligned_cols=80  Identities=14%  Similarity=0.135  Sum_probs=56.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      .|.+|+|.|++|++|...+..+...|+ +|+++++++++.+.+.+ +     +.. ++  .|-++.+..++..+..    
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~-~-----Ga~-~~--i~~~~~~~~~~~~~~~----   93 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR-A-----GAD-YV--INASMQDPLAEIRRIT----   93 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH-H-----TCS-EE--EETTTSCHHHHHHHHT----
T ss_pred             CCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHH-c-----CCc-ee--eccCCcCHHHHHHHHh----
Confidence            478999999999999999999998995 99999999887655433 2     332 22  3444444333332221    


Q ss_pred             hccCCCCCeeEEEecCCc
Q 017812          137 LDSDMHSSIQLLINNAGI  154 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~  154 (365)
                          ..+.+|+++.++|.
T Consensus        94 ----~~~~~d~vid~~g~  107 (170)
T d1jvba2          94 ----ESKGVDAVIDLNNS  107 (170)
T ss_dssp             ----TTSCEEEEEESCCC
T ss_pred             ----hcccchhhhccccc
Confidence                23569999999985

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.52  E-value=0.00017  Score=60.17  Aligned_cols=79  Identities=19%  Similarity=0.207  Sum_probs=54.8

Q ss_pred             CCCCCCEEEEecC----------------CChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEec
Q 017812           55 TGIKRPVCIVTGA----------------TSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVD  118 (365)
Q Consensus        55 ~~~~~k~vlITGa----------------ssGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D  118 (365)
                      .+|+|+.||||+|                ||-.|.++|+++..+|++|+++.-....           .+...+..+  .
T Consensus         2 ~dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~-----------~~p~~~~~~--~   68 (223)
T d1u7za_           2 NDLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSL-----------PTPPFVKRV--D   68 (223)
T ss_dssp             CTTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCC-----------CCCTTEEEE--E
T ss_pred             cccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhccccc-----------Ccccccccc--e
Confidence            4789999999986                6789999999999999999998775421           112233333  3


Q ss_pred             CCChhhHHHHHHHHHHHHhccCCCCCeeEEEecCCcc
Q 017812          119 LSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL  155 (365)
Q Consensus       119 ls~~~~v~~~~~~~~~~~~~~~~~~~id~lv~nAG~~  155 (365)
                      +.+.+++...+   .+.      ....|++|++|++.
T Consensus        69 ~~t~~~m~~~~---~~~------~~~~D~~i~aAAvs   96 (223)
T d1u7za_          69 VMTALEMEAAV---NAS------VQQQNIFIGCAAVA   96 (223)
T ss_dssp             CCSHHHHHHHH---HHH------GGGCSEEEECCBCC
T ss_pred             ehhhHHHHHHH---Hhh------hccceeEeeeechh
Confidence            34444444433   332      23579999999986

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.47  E-value=0.00024  Score=56.68  Aligned_cols=76  Identities=17%  Similarity=0.170  Sum_probs=58.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      ++++|.|+|-|+ ||.+++++..|.+.+.+|+++.|+.+++++..+.+...   ..+..+..|-.               
T Consensus        15 ~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~---~~~~~~~~~~~---------------   75 (171)
T d1p77a1          15 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPY---GNIQAVSMDSI---------------   75 (171)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGG---SCEEEEEGGGC---------------
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhc---cccchhhhccc---------------
Confidence            367899999987 78899999999998889999999999999988887653   24444443311               


Q ss_pred             HhccCCCCCeeEEEecCCcc
Q 017812          136 LLDSDMHSSIQLLINNAGIL  155 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~  155 (365)
                           .....|++||+..+.
T Consensus        76 -----~~~~~diiIN~tp~g   90 (171)
T d1p77a1          76 -----PLQTYDLVINATSAG   90 (171)
T ss_dssp             -----CCSCCSEEEECCCC-
T ss_pred             -----cccccceeeeccccc
Confidence                 225689999998764

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=97.44  E-value=0.002  Score=50.28  Aligned_cols=119  Identities=16%  Similarity=0.208  Sum_probs=77.7

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhhc--CCCceEEEEecCCChhhHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRN--KDARLEAFQVDLSSFQSVLKFKDSL  132 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~--~Vil~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~Dls~~~~v~~~~~~~  132 (365)
                      +..+.+.|.|+ |.+|..+|..|+.+|.  ++++++++++.++....++....  .+........|..   ++       
T Consensus        18 ~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~~---~~-------   86 (160)
T d1i0za1          18 VPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDYS---VT-------   86 (160)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSGG---GG-------
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccchh---hc-------
Confidence            45667888896 9999999999999996  89999999988877777775421  1222222223332   21       


Q ss_pred             HHHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017812          133 QQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  204 (365)
Q Consensus       133 ~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~  204 (365)
                                ..-|++|..||..... ..+.   .+.++.|.    .+.+.+.|.+.+....+-++++|-..
T Consensus        87 ----------~~adiVVitAg~~~~~-g~tR---~~l~~~N~----~i~~~i~~~i~~~~p~aiiivvtNPv  140 (160)
T d1i0za1          87 ----------ANSKIVVVTAGVRQQE-GESR---LNLVQRNV----NVFKFIIPQIVKYSPDCIIIVVSNPV  140 (160)
T ss_dssp             ----------TTCSEEEECCSCCCCT-TCCG---GGGHHHHH----HHHHHHHHHHHHHCTTCEEEECSSSH
T ss_pred             ----------ccccEEEEecCCcccc-Ccch---HHHHHHHH----HHHHHHHHHHHhcCCCcEEEEeCCch
Confidence                      3479999999975332 2222   23344444    46666777666655467788777643

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.39  E-value=0.00051  Score=54.25  Aligned_cols=41  Identities=22%  Similarity=0.282  Sum_probs=35.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSET   99 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~   99 (365)
                      .|.+|+|.|+ |+||...+.-+...|++|+++++++++++.+
T Consensus        27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a   67 (166)
T d1llua2          27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELA   67 (166)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhh
Confidence            3789999886 9999999998888999999999998887554

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=97.37  E-value=0.00094  Score=53.22  Aligned_cols=79  Identities=14%  Similarity=0.281  Sum_probs=53.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCCh-hhHHHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSF-QSVLKFKDSLQQW  135 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~-~~v~~~~~~~~~~  135 (365)
                      .|.+|+|.|+ ||||...+..+...|+ +|+++++++++++-+ +++     +.. .+  .|..+. +......+...  
T Consensus        28 ~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a-~~~-----Ga~-~~--i~~~~~~~~~~~~~~~~~--   95 (174)
T d1e3ia2          28 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKA-KAL-----GAT-DC--LNPRELDKPVQDVITELT--   95 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HHT-----TCS-EE--ECGGGCSSCHHHHHHHHH--
T ss_pred             CCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHHHH-HHh-----CCC-cc--cCCccchhhhhhhHhhhh--
Confidence            4789999975 9999999999999998 788999999886433 233     322 12  233222 23333333322  


Q ss_pred             HhccCCCCCeeEEEecCCc
Q 017812          136 LLDSDMHSSIQLLINNAGI  154 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~  154 (365)
                            .+++|++|.++|.
T Consensus        96 ------~~G~d~vie~~G~  108 (174)
T d1e3ia2          96 ------AGGVDYSLDCAGT  108 (174)
T ss_dssp             ------TSCBSEEEESSCC
T ss_pred             ------cCCCcEEEEeccc
Confidence                  3679999999996

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=97.36  E-value=0.00035  Score=55.82  Aligned_cols=79  Identities=13%  Similarity=0.209  Sum_probs=55.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCC-hhhHHHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSS-FQSVLKFKDSLQQW  135 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~-~~~v~~~~~~~~~~  135 (365)
                      .|.+|+|.|+ +|+|...+..++..|+ +|+++++++++.+.+.+.      +....   .|-.+ .+.+.+..+..   
T Consensus        28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~------Ga~~~---i~~~~~~~~~~~~~~~~---   94 (176)
T d2jhfa2          28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEV------GATEC---VNPQDYKKPIQEVLTEM---   94 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT------TCSEE---ECGGGCSSCHHHHHHHH---
T ss_pred             CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHh------CCeeE---EecCCchhHHHHHHHHH---
Confidence            4889999999 7899999999999996 999999999987644322      22211   22222 23344444333   


Q ss_pred             HhccCCCCCeeEEEecCCc
Q 017812          136 LLDSDMHSSIQLLINNAGI  154 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~  154 (365)
                           ..+.+|++|.+.|.
T Consensus        95 -----~~~G~D~vid~~G~  108 (176)
T d2jhfa2          95 -----SNGGVDFSFEVIGR  108 (176)
T ss_dssp             -----TTSCBSEEEECSCC
T ss_pred             -----hcCCCCEEEecCCc
Confidence                 34689999999996

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.35  E-value=0.0022  Score=49.26  Aligned_cols=117  Identities=15%  Similarity=0.147  Sum_probs=69.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhc
Q 017812           61 VCIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  138 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G~--~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~  138 (365)
                      .+.|.||+|.+|.++|..|+.+|.  ++++++.++.+.+.  .++...  .. ......-+ ...+..+.+         
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a--~Dl~~~--~~-~~~~~~~~-~~~~~~~~~---------   66 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVA--ADLSHI--ET-RATVKGYL-GPEQLPDCL---------   66 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHH--HHHTTS--SS-SCEEEEEE-SGGGHHHHH---------
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhh--HHHhhh--hh-hcCCCeEE-cCCChHHHh---------
Confidence            488999999999999999999995  89999988754332  344322  11 11111111 122222211         


Q ss_pred             cCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017812          139 SDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  204 (365)
Q Consensus       139 ~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~  204 (365)
                          ..-|++|..||..... ..+.   .+.++.|.--.-.    +.+.+.+....+.|+++|...
T Consensus        67 ----~~aDivVitag~~~~~-g~sR---~~ll~~N~~i~~~----i~~~i~~~~p~~iiivvtNPv  120 (144)
T d1mlda1          67 ----KGCDVVVIPAGVPRKP-GMTR---DDLFNTNATIVAT----LTAACAQHCPDAMICIISNPV  120 (144)
T ss_dssp             ----TTCSEEEECCSCCCCT-TCCG---GGGHHHHHHHHHH----HHHHHHHHCTTSEEEECSSCH
T ss_pred             ----CCCCEEEECCCcCCCC-CCCc---chHHHHHHHHHHH----HHHHHHhcCCCeEEEEecCch
Confidence                3489999999974322 2232   2346666655444    444444444357888887644

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.32  E-value=0.0031  Score=48.43  Aligned_cols=113  Identities=20%  Similarity=0.280  Sum_probs=67.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHCCC--EEEEEecCch--hHHHHHHHHHhhc----CCCceEEEEecCCChhhHHHHHHHH
Q 017812           61 VCIVTGATSGLGAAAAYALSREGF--HVVLVGRSSH--LLSETMADITSRN----KDARLEAFQVDLSSFQSVLKFKDSL  132 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G~--~Vil~~r~~~--~~~~~~~~l~~~~----~~~~~~~~~~Dls~~~~v~~~~~~~  132 (365)
                      .|.|.||+|.+|..+|..|+.+|.  ++++++++++  +++....++....    ...++.....+  +.+.        
T Consensus         2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~--d~~~--------   71 (145)
T d1hyea1           2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDE--NLRI--------   71 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETT--CGGG--------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcc--hHHH--------
Confidence            388999999999999999999994  9999998863  4455555555421    11222222221  2221        


Q ss_pred             HHHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEc
Q 017812          133 QQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVT  201 (365)
Q Consensus       133 ~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vs  201 (365)
                               ...-|++|..||.... ...+..   +.++.|..    +.+.+.+.+.+.. +..|+.||
T Consensus        72 ---------l~~aDvVVitAG~~~~-~g~sR~---dl~~~Na~----iv~~i~~~i~~~~-~~~iivVt  122 (145)
T d1hyea1          72 ---------IDESDVVIITSGVPRK-EGMSRM---DLAKTNAK----IVGKYAKKIAEIC-DTKIFVIT  122 (145)
T ss_dssp             ---------GTTCSEEEECCSCCCC-TTCCHH---HHHHHHHH----HHHHHHHHHHHHC-CCEEEECS
T ss_pred             ---------hccceEEEEecccccC-CCCChh---hhhhhhHH----HHHHHHHHHhccC-CCeEEEEc
Confidence                     1348999999997532 223322   34555554    4455555554443 34555553

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=97.32  E-value=0.00069  Score=54.15  Aligned_cols=79  Identities=13%  Similarity=0.174  Sum_probs=55.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhh-HHHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQS-VLKFKDSLQQW  135 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~-v~~~~~~~~~~  135 (365)
                      .|.+|+|.|+ ||+|...+..+...|+ +|+++++++++++-+.+-      +....+   |-++.+. .+...+ ..  
T Consensus        29 ~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~------GA~~~i---n~~~~~~~~~~~~~-~~--   95 (176)
T d1d1ta2          29 PGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAV------GATECI---SPKDSTKPISEVLS-EM--   95 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHH------TCSEEE---CGGGCSSCHHHHHH-HH--
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhc------CCcEEE---CccccchHHHHHHH-Hh--
Confidence            4889999986 8999999999999995 899999999998654433      433222   3333332 222222 22  


Q ss_pred             HhccCCCCCeeEEEecCCc
Q 017812          136 LLDSDMHSSIQLLINNAGI  154 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~  154 (365)
                           ..+.+|++|.+.|.
T Consensus        96 -----~g~G~d~vi~~~g~  109 (176)
T d1d1ta2          96 -----TGNNVGYTFEVIGH  109 (176)
T ss_dssp             -----HTSCCCEEEECSCC
T ss_pred             -----ccccceEEEEeCCc
Confidence                 13579999999986

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.32  E-value=0.0019  Score=49.43  Aligned_cols=113  Identities=19%  Similarity=0.257  Sum_probs=72.3

Q ss_pred             EEEecCCChHHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhhcC-CCceEEEEecCCChhhHHHHHHHHHHHHhc
Q 017812           62 CIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRNK-DARLEAFQVDLSSFQSVLKFKDSLQQWLLD  138 (365)
Q Consensus        62 vlITGassGIG~~~a~~la~~G~--~Vil~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~  138 (365)
                      +.|.|+ |.+|..+|..++.+|.  ++++.++++++++....++....+ .........|   .+++             
T Consensus         3 I~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~---~~~~-------------   65 (140)
T d1a5za1           3 IGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD---YADL-------------   65 (140)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC---GGGG-------------
T ss_pred             EEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCc---HHHh-------------
Confidence            556686 8999999999999984  899999999888776666654321 2233333333   2221             


Q ss_pred             cCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCC
Q 017812          139 SDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSF  203 (365)
Q Consensus       139 ~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~  203 (365)
                          ..-|++|..||..... ..+.   .+.+..|.    .+.+.+.+.+.+....+.++++|-.
T Consensus        66 ----~~adivvitag~~~~~-g~~r---~dl~~~N~----~I~~~i~~~i~~~~p~aivivvtNP  118 (140)
T d1a5za1          66 ----KGSDVVIVAAGVPQKP-GETR---LQLLGRNA----RVMKEIARNVSKYAPDSIVIVVTNP  118 (140)
T ss_dssp             ----TTCSEEEECCCCCCCS-SCCH---HHHHHHHH----HHHHHHHHHHHHHCTTCEEEECSSS
T ss_pred             ----cCCCEEEEecccccCC-Ccch---hhhhcccc----chHHHHHHHHHhcCCCcEEEEeCCc
Confidence                2379999999985432 2222   22344453    4566677777665546777776643

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=97.31  E-value=0.0015  Score=51.97  Aligned_cols=78  Identities=13%  Similarity=0.181  Sum_probs=52.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      .|.+|+|.|+ |+||...+..+...|+ +|+++++++++++.+. ++     +.. ++  .|..+.+ ..+.+.++    
T Consensus        28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~-~~-----Ga~-~~--i~~~~~~-~~~~i~~~----   92 (174)
T d1f8fa2          28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAK-QL-----GAT-HV--INSKTQD-PVAAIKEI----   92 (174)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH-HH-----TCS-EE--EETTTSC-HHHHHHHH----
T ss_pred             CCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHH-Hc-----CCe-EE--EeCCCcC-HHHHHHHH----
Confidence            4789999998 8999999998888898 5566788887765543 33     322 22  3555433 33333332    


Q ss_pred             hccCCCCCeeEEEecCCc
Q 017812          137 LDSDMHSSIQLLINNAGI  154 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~  154 (365)
                          ..+++|++|.+.|.
T Consensus        93 ----t~gg~D~vid~~G~  106 (174)
T d1f8fa2          93 ----TDGGVNFALESTGS  106 (174)
T ss_dssp             ----TTSCEEEEEECSCC
T ss_pred             ----cCCCCcEEEEcCCc
Confidence                33689999999996

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=97.29  E-value=0.00038  Score=55.62  Aligned_cols=79  Identities=11%  Similarity=0.064  Sum_probs=54.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      .|.+|+|.|+ ||||...+..+...|+ +|+++++++++++.+. ++     +..   ..+|..+.+..+    ++.+..
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~-~l-----Ga~---~~i~~~~~~~~~----~v~~~t   92 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAK-FY-----GAT---DILNYKNGHIED----QVMKLT   92 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHH-HH-----TCS---EEECGGGSCHHH----HHHHHT
T ss_pred             CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHH-hh-----Ccc---ccccccchhHHH----HHHHHh
Confidence            4788999986 8999999998888998 7999999988865543 33     322   224555533332    233221


Q ss_pred             hccCCCCCeeEEEecCCc
Q 017812          137 LDSDMHSSIQLLINNAGI  154 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~  154 (365)
                          ....+|++|.++|.
T Consensus        93 ----~g~G~D~vid~~g~  106 (174)
T d1jqba2          93 ----NGKGVDRVIMAGGG  106 (174)
T ss_dssp             ----TTSCEEEEEECSSC
T ss_pred             ----hccCcceEEEccCC
Confidence                23469999999995

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=97.29  E-value=0.0036  Score=47.83  Aligned_cols=115  Identities=18%  Similarity=0.147  Sum_probs=73.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHCCC--EEEEEecC--chhHHHHHHHHHhhc-CCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           61 VCIVTGATSGLGAAAAYALSREGF--HVVLVGRS--SHLLSETMADITSRN-KDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G~--~Vil~~r~--~~~~~~~~~~l~~~~-~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      .+.|.||+|.+|.++|..++.+|.  ++++.+.+  ++.++....++.... ..........|.   +++          
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~---~~~----------   68 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGY---EDT----------   68 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCG---GGG----------
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCH---HHh----------
Confidence            478999999999999999999985  79999864  344544445554321 133444444433   221          


Q ss_pred             HhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCC
Q 017812          136 LLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSF  203 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~  203 (365)
                             ..-|++|..||.... ...+.   .+.++.|.    .+.+.+.+.+.+....+.++++|-.
T Consensus        69 -------~~aDiVvitaG~~~~-~g~~R---~dl~~~N~----~I~~~i~~~i~~~~p~~i~ivvtNP  121 (142)
T d1o6za1          69 -------AGSDVVVITAGIPRQ-PGQTR---IDLAGDNA----PIMEDIQSSLDEHNDDYISLTTSNP  121 (142)
T ss_dssp             -------TTCSEEEECCCCCCC-TTCCH---HHHHHHHH----HHHHHHHHHHHTTCSCCEEEECCSS
T ss_pred             -------hhcCEEEEecccccc-cCCch---hhHHHHHH----HHHHHHHHHHHhcCCCceEEEecCh
Confidence                   248999999997532 22332   33455554    5667777777776656777777653

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=97.26  E-value=0.00089  Score=52.19  Aligned_cols=124  Identities=15%  Similarity=0.174  Sum_probs=74.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhc--CCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRN--KDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      +.+.+.|.|+ |.+|..+|..++..|. ++++.+.++++++....++....  .+........  ++.+   +.   +  
T Consensus         6 k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~--~~~~---~~---~--   74 (154)
T d1pzga1           6 RRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE--YSYE---AA---L--   74 (154)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEE--CSHH---HH---H--
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEecc--Cchh---hh---h--
Confidence            4567778897 9999999999999985 99999999988877777765421  1111111111  1111   11   1  


Q ss_pred             HHhccCCCCCeeEEEecCCcccCCCCCCH-HHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017812          135 WLLDSDMHSSIQLLINNAGILATSSRLTP-EGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  204 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~-~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~  204 (365)
                              ..-|++|..||......+.+. ..=.+.+..|.    .+++.+.+.+.+....+.++++|...
T Consensus        75 --------~~adiVvitag~~~~~g~~~~~~tR~~l~~~n~----~iv~~i~~~i~~~~p~aiviivsNPv  133 (154)
T d1pzga1          75 --------TGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNS----KIIREIGQNIKKYCPKTFIIVVTNPL  133 (154)
T ss_dssp             --------TTCSEEEECCSCSSCTTCCGGGCCGGGGHHHHH----HHHHHHHHHHHHHCTTCEEEECCSSH
T ss_pred             --------cCCCeEEEecccccCCCCCCcccchhhhhhhhH----HHHHHHHHHHHhcCCCcEEEEeCCcH
Confidence                    248999999998643322111 11123344444    34555555555544457777777644

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.22  E-value=0.0012  Score=52.18  Aligned_cols=76  Identities=16%  Similarity=0.180  Sum_probs=52.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .|.+|+|.|+ |++|...+..+...|++|+++++++++++.+. ++     +... ++  |..+.++..   +   +   
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~-~l-----Ga~~-~i--~~~~~~~~~---~---~---   87 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAM-KM-----GADH-YI--ATLEEGDWG---E---K---   87 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH-HH-----TCSE-EE--EGGGTSCHH---H---H---
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhh-cc-----CCcE-Ee--eccchHHHH---H---h---
Confidence            4789999987 89999988887788999999999999876543 33     3332 22  322222211   1   1   


Q ss_pred             ccCCCCCeeEEEecCCcc
Q 017812          138 DSDMHSSIQLLINNAGIL  155 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~  155 (365)
                         ..+..|.++.+.|..
T Consensus        88 ---~~~~~d~vi~~~~~~  102 (168)
T d1piwa2          88 ---YFDTFDLIVVCASSL  102 (168)
T ss_dssp             ---SCSCEEEEEECCSCS
T ss_pred             ---hhcccceEEEEecCC
Confidence               346799999988764

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=97.18  E-value=0.0052  Score=46.95  Aligned_cols=113  Identities=14%  Similarity=0.186  Sum_probs=70.9

Q ss_pred             EEEEecCCChHHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhh--cCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           61 VCIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSR--NKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G~--~Vil~~r~~~~~~~~~~~l~~~--~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      .+.|.|+ |.+|.++|..++.+|.  +++++++++++++....++...  ..+ .......  .+.+.+           
T Consensus         3 Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~-~~~i~~~--~~~~~~-----------   67 (143)
T d1llda1           3 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYP-TVSIDGS--DDPEIC-----------   67 (143)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGST-TCEEEEE--SCGGGG-----------
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCC-CceeecC--CCHHHh-----------
Confidence            3666697 9999999999999995  8999999998877666666543  112 2222222  122221           


Q ss_pred             hccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcC
Q 017812          137 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS  202 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS  202 (365)
                            ..-|++|..||.... ...+..   +.+..|.    .+.+.+.+.+.+....+.++++|-
T Consensus        68 ------~daDvVVitaG~~~~-~g~~R~---dl~~~N~----~i~~~i~~~i~~~~p~ai~ivvtN  119 (143)
T d1llda1          68 ------RDADMVVITAGPRQK-PGQSRL---ELVGATV----NILKAIMPNLVKVAPNAIYMLITN  119 (143)
T ss_dssp             ------TTCSEEEECCCCCCC-TTCCHH---HHHHHHH----HHHHHHHHHHHHHCTTSEEEECCS
T ss_pred             ------hCCcEEEEecccccC-CCCchh---hhhhhhH----HHHHHHHHHHHhhCCCeEEEEeCC
Confidence                  237999999998532 223332   3455555    455555565555543567766664

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=97.16  E-value=0.003  Score=49.05  Aligned_cols=116  Identities=9%  Similarity=0.088  Sum_probs=68.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHCCC---------EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHH
Q 017812           61 VCIVTGATSGLGAAAAYALSREGF---------HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDS  131 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G~---------~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~  131 (365)
                      .|.|+||+|.+|..+|..|+..+.         +++...++.++++....++..... .....+...-.+.+        
T Consensus         6 KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--------   76 (154)
T d1y7ta1           6 RVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAF-PLLAGLEATDDPKV--------   76 (154)
T ss_dssp             EEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTC-TTEEEEEEESCHHH--------
T ss_pred             EEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhcccc-ccccccccCCchhh--------
Confidence            699999999999999999998763         334445566666666666554432 22333333222211        


Q ss_pred             HHHHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcC-CCCCeEEEEcC
Q 017812          132 LQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNS-PVPSRIVNVTS  202 (365)
Q Consensus       132 ~~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~-~~~g~iV~vsS  202 (365)
                               .....|++|..||.... +..+.+   +.+..|+    ...+.+.+.+.+. +..+.|+++|.
T Consensus        77 ---------~~~~advViitaG~~~~-pg~~r~---dl~~~N~----~i~~~~~~~i~k~a~~~~~vivvsN  131 (154)
T d1y7ta1          77 ---------AFKDADYALLVGAAPRK-AGMERR---DLLQVNG----KIFTEQGRALAEVAKKDVKVLVVGN  131 (154)
T ss_dssp             ---------HTTTCSEEEECCCCCCC-TTCCHH---HHHHHHH----HHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             ---------hcccccEEEeecCcCCC-CCCcHH---HHHHHHH----HHHHHHHHHHHHhCCCCcEEEEecC
Confidence                     12458999999998532 333333   3344454    4455555555542 22456666664

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=97.12  E-value=0.00081  Score=54.68  Aligned_cols=117  Identities=15%  Similarity=0.089  Sum_probs=68.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      .|.+|+|.|+ |+||...+......|+ +|+++++++++++.+.+.      +...   ..|-.+. ++.+.+.++.   
T Consensus        25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~~------Ga~~---~~~~~~~-~~~~~i~~~t---   90 (195)
T d1kola2          25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQ------GFEI---ADLSLDT-PLHEQIAALL---   90 (195)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT------TCEE---EETTSSS-CHHHHHHHHH---
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhhhc------cccE---EEeCCCc-CHHHHHHHHh---
Confidence            4889999986 8999888888777887 899999998887544322      3221   2333333 3333333332   


Q ss_pred             hccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCC
Q 017812          137 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSF  203 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~  203 (365)
                          ....+|++|.+.|.......  ..      ..+..+.-..++..+..++.   .|+|+.++-.
T Consensus        91 ----~g~g~D~vid~vG~~~~~~~--~~------~~~~~~~~~~l~~~~~~~r~---gG~v~~~G~~  142 (195)
T d1kola2          91 ----GEPEVDCAVDAVGFEARGHG--HE------GAKHEAPATVLNSLMQVTRV---AGKIGIPGLY  142 (195)
T ss_dssp             ----SSSCEEEEEECCCTTCBCSS--TT------GGGSBCTTHHHHHHHHHEEE---EEEEEECSCC
T ss_pred             ----CCCCcEEEEECccccccCCc--cc------ceeecCcHHHHHHHHHHHhc---CCEEEEeeec
Confidence                34579999999985321110  00      00111222233444444444   5899998853

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=97.11  E-value=0.0013  Score=50.52  Aligned_cols=116  Identities=11%  Similarity=0.166  Sum_probs=70.3

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhc--CCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRN--KDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      +.+.|.|+ |.+|..+|..|+.++. ++++.+.++++.+....++....  .+....+...  .|.+++           
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~--~d~~~~-----------   67 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT--NNYADT-----------   67 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCGGGG-----------
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEec--CcHHHh-----------
Confidence            35666786 9999999999999985 99999999988777666664321  0112222221  122221           


Q ss_pred             hccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCC
Q 017812          137 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSF  203 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~  203 (365)
                            ..-|++|..||..... ..+.   .+.+..|.    .+.+.+.+.+.+....+.++++|-.
T Consensus        68 ------~~advvvitag~~~~~-~~~r---~dl~~~N~----~i~~~i~~~i~k~~p~aivivvtNP  120 (142)
T d1uxja1          68 ------ANSDVIVVTSGAPRKP-GMSR---EDLIKVNA----DITRACISQAAPLSPNAVIIMVNNP  120 (142)
T ss_dssp             ------TTCSEEEECCSCC-------------CHHHHH----HHHHHHHHHHGGGCTTCEEEECSSS
T ss_pred             ------cCCCEEEEeeeccCCc-Ccch---hHHHhHHH----HHHHHHHHHHhccCCCceEEEeCCc
Confidence                  3478999999975322 1121   23345554    4677777777775546777776643

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=97.11  E-value=0.0011  Score=52.89  Aligned_cols=79  Identities=16%  Similarity=0.333  Sum_probs=55.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhh-HHHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQS-VLKFKDSLQQW  135 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~-v~~~~~~~~~~  135 (365)
                      .|.+|+|.|+ ||+|...+..+...|+ +|+++++++++++.+.+ +     +.. ++  .|.++.+. +.+.....   
T Consensus        27 ~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~-l-----Ga~-~~--i~~~~~d~~~~~~~~~~---   93 (174)
T d1p0fa2          27 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE-L-----GAT-EC--LNPKDYDKPIYEVICEK---   93 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH-T-----TCS-EE--ECGGGCSSCHHHHHHHH---
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHHH-c-----CCc-EE--EcCCCchhHHHHHHHHh---
Confidence            4889999986 8999999999999997 89999999998865532 2     322 12  34443332 33322221   


Q ss_pred             HhccCCCCCeeEEEecCCc
Q 017812          136 LLDSDMHSSIQLLINNAGI  154 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~  154 (365)
                           ..+.+|++|-++|.
T Consensus        94 -----~~~G~d~vid~~g~  107 (174)
T d1p0fa2          94 -----TNGGVDYAVECAGR  107 (174)
T ss_dssp             -----TTSCBSEEEECSCC
T ss_pred             -----cCCCCcEEEEcCCC
Confidence                 34689999999986

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=97.10  E-value=0.0017  Score=49.71  Aligned_cols=114  Identities=16%  Similarity=0.221  Sum_probs=68.6

Q ss_pred             EEEecCCChHHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhhc--CCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           62 CIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRN--KDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        62 vlITGassGIG~~~a~~la~~G~--~Vil~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      +.|+|| |.+|..+|..|+.+|.  ++++.+.++++++....++....  ......+...  .+.+.+            
T Consensus         3 I~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~~~~~------------   67 (142)
T d1guza1           3 ITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDYADT------------   67 (142)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCGGGG------------
T ss_pred             EEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEec--CCHHHh------------
Confidence            667796 9999999999999984  99999999988776655553321  0122333322  222221            


Q ss_pred             ccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCC
Q 017812          138 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSF  203 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~  203 (365)
                           ..-|++|..||...... .+.   .+.++.|.-    +.+.+.+.+.+....+.++++|-.
T Consensus        68 -----~dadvvvitag~~~~~g-~~r---~~l~~~N~~----i~~~i~~~i~~~~p~aivivvtNP  120 (142)
T d1guza1          68 -----ANSDIVIITAGLPRKPG-MTR---EDLLMKNAG----IVKEVTDNIMKHSKNPIIIVVSNP  120 (142)
T ss_dssp             -----TTCSEEEECCSCCCCTT-CCH---HHHHHHHHH----HHHHHHHHHHHHCSSCEEEECCSS
T ss_pred             -----cCCeEEEEEEecCCCCC-Cch---HHHHHHHHH----HHHHHHHHhhccCCCeEEEEecCC
Confidence                 34799999999853322 222   233444443    344555555544435677776643

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=97.10  E-value=0.002  Score=50.74  Aligned_cols=74  Identities=19%  Similarity=0.173  Sum_probs=52.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .|.+|+|.|+ ||||...+..+...|+++++++++.++.+.+ +++     +...   .+|..+.+...       .   
T Consensus        30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a-~~l-----Gad~---~i~~~~~~~~~-------~---   89 (168)
T d1uufa2          30 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAA-KAL-----GADE---VVNSRNADEMA-------A---   89 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHH-HHH-----TCSE---EEETTCHHHHH-------T---
T ss_pred             CCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHHH-hcc-----CCcE---EEECchhhHHH-------H---
Confidence            4889999986 8999999988888999999999998876433 344     3321   23544443221       1   


Q ss_pred             ccCCCCCeeEEEecCCc
Q 017812          138 DSDMHSSIQLLINNAGI  154 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~  154 (365)
                         ..+++|++|.+.|.
T Consensus        90 ---~~~~~D~vid~~g~  103 (168)
T d1uufa2          90 ---HLKSFDFILNTVAA  103 (168)
T ss_dssp             ---TTTCEEEEEECCSS
T ss_pred             ---hcCCCceeeeeeec
Confidence               33579999999985

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=97.09  E-value=0.001  Score=52.88  Aligned_cols=79  Identities=14%  Similarity=0.229  Sum_probs=53.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCC-hhhHHHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSS-FQSVLKFKDSLQQW  135 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~-~~~v~~~~~~~~~~  135 (365)
                      .|.+|+|.|+ +|+|...+..+...|+ +|+.+++++++.+. .+++     +..- +  .|..+ .+.+.+..++.   
T Consensus        28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~-ak~l-----Ga~~-~--i~~~~~~~~~~~~~~~~---   94 (176)
T d2fzwa2          28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFAR-AKEF-----GATE-C--INPQDFSKPIQEVLIEM---   94 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHH-HHHH-----TCSE-E--ECGGGCSSCHHHHHHHH---
T ss_pred             CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHH-HHHh-----CCcE-E--EeCCchhhHHHHHHHHH---
Confidence            4889999998 5999999999999996 78888888887644 3344     3222 2  23322 23344444332   


Q ss_pred             HhccCCCCCeeEEEecCCc
Q 017812          136 LLDSDMHSSIQLLINNAGI  154 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~  154 (365)
                           ..+++|++|.+.|.
T Consensus        95 -----~~~g~D~vid~~G~  108 (176)
T d2fzwa2          95 -----TDGGVDYSFECIGN  108 (176)
T ss_dssp             -----TTSCBSEEEECSCC
T ss_pred             -----cCCCCcEeeecCCC
Confidence                 33679999999985

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.09  E-value=0.0042  Score=47.48  Aligned_cols=113  Identities=17%  Similarity=0.158  Sum_probs=71.4

Q ss_pred             EEEecCCChHHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhhc--CCCceEEEEe-cCCChhhHHHHHHHHHHHH
Q 017812           62 CIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRN--KDARLEAFQV-DLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        62 vlITGassGIG~~~a~~la~~G~--~Vil~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~-Dls~~~~v~~~~~~~~~~~  136 (365)
                      +.|.|+ |.+|..+|..++.+|.  +++++++++++++....++....  .......... |.   +++           
T Consensus         3 I~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~---~~~-----------   67 (142)
T d1ojua1           3 LGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADY---SLL-----------   67 (142)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCG---GGG-----------
T ss_pred             EEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCH---HHh-----------
Confidence            566786 9999999999999984  79999999988777666665421  1222233322 32   221           


Q ss_pred             hccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCC
Q 017812          137 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSF  203 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~  203 (365)
                            ..-|++|..||..... ..+.   .+.+..|    ..+.+.+.+.+.+....+.++++|-.
T Consensus        68 ------~~adiVvitag~~~~~-g~~r---~~l~~~n----~~i~~~i~~~i~~~~p~aivivvtNP  120 (142)
T d1ojua1          68 ------KGSEIIVVTAGLARKP-GMTR---LDLAHKN----AGIIKDIAKKIVENAPESKILVVTNP  120 (142)
T ss_dssp             ------TTCSEEEECCCCCCCS-SCCH---HHHHHHH----HHHHHHHHHHHHTTSTTCEEEECSSS
T ss_pred             ------ccccEEEEeccccCCC-CCch---HHHHHHh----hHHHHHHHHHHHhhCCCcEEEEecCC
Confidence                  3478999999975332 2222   2233333    35566667776766546777777654

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.06  E-value=0.00068  Score=51.37  Aligned_cols=73  Identities=18%  Similarity=0.200  Sum_probs=53.4

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhcc
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  139 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~  139 (365)
                      |.++|-|+ |-+|+.+|+.|.++|..|++++.|+++.+++.    ..    ...++..|.++++.+.++           
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~----~~----~~~~~~gd~~~~~~l~~a-----------   60 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA----SY----ATHAVIANATEENELLSL-----------   60 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTT----TT----CSEEEECCTTCTTHHHHH-----------
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHH----Hh----CCcceeeecccchhhhcc-----------
Confidence            34677777 78999999999999999999999998776643    22    235667899998876553           


Q ss_pred             CCCCCeeEEEecCC
Q 017812          140 DMHSSIQLLINNAG  153 (365)
Q Consensus       140 ~~~~~id~lv~nAG  153 (365)
                       .....|.+|...+
T Consensus        61 -~i~~a~~vi~~~~   73 (134)
T d2hmva1          61 -GIRNFEYVIVAIG   73 (134)
T ss_dssp             -TGGGCSEEEECCC
T ss_pred             -CCccccEEEEEcC
Confidence             1234677775554

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=97.01  E-value=0.0026  Score=48.68  Aligned_cols=113  Identities=15%  Similarity=0.149  Sum_probs=65.8

Q ss_pred             EEEecCCChHHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHhhcCC-CceEEEEecCCChhhHHHHHHHHHHHHhc
Q 017812           62 CIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMADITSRNKD-ARLEAFQVDLSSFQSVLKFKDSLQQWLLD  138 (365)
Q Consensus        62 vlITGassGIG~~~a~~la~~G~--~Vil~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~Dls~~~~v~~~~~~~~~~~~~  138 (365)
                      +.|.|+ |.+|..+|..++.+|.  +++++++++++++....++....+- ........   +.++              
T Consensus         4 I~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~---~~~~--------------   65 (142)
T d1y6ja1           4 VAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAG---DYSD--------------   65 (142)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CGGG--------------
T ss_pred             EEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeC---cHHH--------------
Confidence            555587 9999999999999985  8999999998776666666543221 12222222   2221              


Q ss_pred             cCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCC
Q 017812          139 SDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSF  203 (365)
Q Consensus       139 ~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~  203 (365)
                         ...-|++|..||..... ..+.   .+.+..|.    .+.+.+.+.+.+....+.++++|-.
T Consensus        66 ---~~~adivvitag~~~~~-~~~r---~~l~~~N~----~i~~~i~~~i~~~~p~ai~ivvtNP  119 (142)
T d1y6ja1          66 ---VKDCDVIVVTAGANRKP-GETR---LDLAKKNV----MIAKEVTQNIMKYYNHGVILVVSNP  119 (142)
T ss_dssp             ---GTTCSEEEECCCC-------CH---HHHHHHHH----HHHHHHHHHHHHHCCSCEEEECSSS
T ss_pred             ---hCCCceEEEecccccCc-Ccch---hHHhhHHH----HHHHHHHHHhhccCCCceEEEecCh
Confidence               13479999999975322 2222   23445554    5556666666654435777777653

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.01  E-value=0.0052  Score=47.39  Aligned_cols=120  Identities=13%  Similarity=0.154  Sum_probs=74.9

Q ss_pred             EEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhh--cCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           61 VCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSR--NKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~--~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .+.|.|+ |++|..+|..++.++. ++++.++++++++....++...  ..+.+..+...|  +.+.             
T Consensus         5 KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~~~~-------------   68 (150)
T d1t2da1           5 KIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--TYDD-------------   68 (150)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--CGGG-------------
T ss_pred             eEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--cccc-------------
Confidence            4777795 9999999998888885 9999999998887777776542  112333343332  2222             


Q ss_pred             ccCCCCCeeEEEecCCcccCCCCCC-HHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017812          138 DSDMHSSIQLLINNAGILATSSRLT-PEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  204 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~~~~~~-~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~  204 (365)
                          ...-|++|..||......+.+ ...=.+.+..|.    .+.+.+.+.+.+....+.++++|-..
T Consensus        69 ----~~~advvvitag~~~~~g~~~~~~~R~~l~~~N~----~iv~~i~~~i~~~~p~aivivvtNPv  128 (150)
T d1t2da1          69 ----LAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNN----KIMIEIGGHIKKNCPNAFIIVVTNPV  128 (150)
T ss_dssp             ----GTTCSEEEECCSCSSCTTCCSTTCCGGGGHHHHH----HHHHHHHHHHHHHCTTSEEEECSSSH
T ss_pred             ----cCCCcEEEEecccccCCCCCccccchhHHHHHHH----HHHHHHHHHHHhcCCCeEEEEecCch
Confidence                134899999999864322211 111233455564    55566666666555457777777543

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.99  E-value=0.00064  Score=54.39  Aligned_cols=50  Identities=18%  Similarity=0.395  Sum_probs=43.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhc
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRN  107 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~  107 (365)
                      +++||.|+|-|+ ||.+++++..|.+.| +|++..|+.++.+++.+++....
T Consensus        15 ~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~~~   64 (177)
T d1nvta1          15 RVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKL   64 (177)
T ss_dssp             CCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHHhh
Confidence            478999999987 689999999998777 99999999999999998887654

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=96.94  E-value=0.015  Score=45.98  Aligned_cols=117  Identities=9%  Similarity=0.026  Sum_probs=67.0

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCC-------EEEEEecCc--hhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHH
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGF-------HVVLVGRSS--HLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKD  130 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~-------~Vil~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~  130 (365)
                      ..|.||||+|.||..++..|++...       .+.+.+.+.  +.++...-++........-.....  ++..   +   
T Consensus        25 ~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~~--~~~~---~---   96 (175)
T d7mdha1          25 VNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIG--IDPY---E---   96 (175)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEE--SCHH---H---
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCcccc--ccch---h---
Confidence            4699999999999999999997532       455555544  345555555544322211122222  2211   1   


Q ss_pred             HHHHHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcC-CCCCeEEEEcC
Q 017812          131 SLQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNS-PVPSRIVNVTS  202 (365)
Q Consensus       131 ~~~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~-~~~g~iV~vsS  202 (365)
                                .....|++|..||.... +..+.   ++.++.|.    .+.+.+.+.+.+. +...+|+.+|-
T Consensus        97 ----------~~~~aDvVvi~ag~~rk-pg~tR---~Dll~~N~----~I~k~~~~~i~~~a~~~~~vlvv~N  151 (175)
T d7mdha1          97 ----------VFEDVDWALLIGAKPRG-PGMER---AALLDING----QIFADQGKALNAVASKNVKVLVVGN  151 (175)
T ss_dssp             ----------HTTTCSEEEECCCCCCC-TTCCH---HHHHHHHH----HHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             ----------hccCCceEEEeeccCCC-CCCcH---HHHHHHHH----HHHHHHHHHHHhhCCCCcEEEEecC
Confidence                      12469999999998532 33333   34555564    4445555555552 22356666664

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=96.92  E-value=0.002  Score=50.94  Aligned_cols=78  Identities=17%  Similarity=0.154  Sum_probs=51.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      .|.+|+|.|+ |++|...+..+...|+ +|+.+++++++++.+.+.      +.. ++  .|-++ +.++...+..    
T Consensus        32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~------ga~-~~--i~~~~-~~~~~~~~~~----   96 (172)
T d1h2ba2          32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERL------GAD-HV--VDARR-DPVKQVMELT----   96 (172)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHT------TCS-EE--EETTS-CHHHHHHHHT----
T ss_pred             CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHhhc------ccc-ee--ecCcc-cHHHHHHHhh----
Confidence            3789999986 9999999988888886 778889988776554422      222 22  23332 3333333221    


Q ss_pred             hccCCCCCeeEEEecCCc
Q 017812          137 LDSDMHSSIQLLINNAGI  154 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~  154 (365)
                          ....+|++|.++|.
T Consensus        97 ----~~~g~d~vid~~g~  110 (172)
T d1h2ba2          97 ----RGRGVNVAMDFVGS  110 (172)
T ss_dssp             ----TTCCEEEEEESSCC
T ss_pred             ----CCCCceEEEEecCc
Confidence                23569999999996

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=96.85  E-value=0.0047  Score=47.67  Aligned_cols=76  Identities=13%  Similarity=0.088  Sum_probs=59.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhccC
Q 017812           61 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  140 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~~  140 (365)
                      .++|.|. +-+|..++++|.++|.+|++++.++++..+..++...    ..+.++..|.+|++.++++            
T Consensus         5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~----~~~~vi~Gd~~d~~~L~~a------------   67 (153)
T d1id1a_           5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG----DNADVIPGDSNDSSVLKKA------------   67 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC----TTCEEEESCTTSHHHHHHH------------
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhc----CCcEEEEccCcchHHHHHh------------
Confidence            5888888 5799999999999999999999998876665555543    3578899999998766553            


Q ss_pred             CCCCeeEEEecCC
Q 017812          141 MHSSIQLLINNAG  153 (365)
Q Consensus       141 ~~~~id~lv~nAG  153 (365)
                      .....|.+|...+
T Consensus        68 ~i~~a~~vi~~~~   80 (153)
T d1id1a_          68 GIDRCRAILALSD   80 (153)
T ss_dssp             TTTTCSEEEECSS
T ss_pred             ccccCCEEEEccc
Confidence            2345777876654

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.84  E-value=0.016  Score=44.27  Aligned_cols=117  Identities=15%  Similarity=0.186  Sum_probs=69.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHC-C--CEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           61 VCIVTGATSGLGAAAAYALSRE-G--FHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~-G--~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .+.|+|++|.+|.++|..|+.+ +  .++++.+.++ ..+...-++........... ..+-.+.+.+            
T Consensus         2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl~h~~~~~~~~~-~~~~~~~~~~------------   67 (145)
T d2cmda1           2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKG-FSGEDATPAL------------   67 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHHHTSCSSCEEEE-ECSSCCHHHH------------
T ss_pred             EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHHHCCccccCCcE-EEcCCCcccc------------
Confidence            4789999999999999998754 4  5899999865 44444455554321222222 1222222221            


Q ss_pred             ccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017812          138 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  204 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~  204 (365)
                           ..-|++|..||..... ..+.   .+.++.|.-    +.+.+.+.+.+....+.++++|...
T Consensus        68 -----~~aDvvvitaG~~~k~-g~~R---~dl~~~N~~----i~~~v~~~i~~~~p~aivivvtNPv  121 (145)
T d2cmda1          68 -----EGADVVLISAGVRRKP-GMDR---SDLFNVNAG----IVKNLVQQVAKTCPKACIGIITNPV  121 (145)
T ss_dssp             -----TTCSEEEECCSCCCCT-TCCG---GGGHHHHHH----HHHHHHHHHHHHCTTSEEEECSSSH
T ss_pred             -----CCCCEEEECCCccCCC-Ccch---hhHHHHHHH----HHHHHHHHHHhhCCCcEEEEccCCc
Confidence                 2379999999985322 2222   344666644    4444455555444357788887644

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=96.82  E-value=0.0032  Score=49.80  Aligned_cols=79  Identities=14%  Similarity=0.265  Sum_probs=53.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhh-HHHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQS-VLKFKDSLQQW  135 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~-v~~~~~~~~~~  135 (365)
                      .|.+|+|.|+ +|+|...+..++..|+ +|+.+++++++++.+. ++     +.. ++  +|.++.+. +++..+...  
T Consensus        28 ~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~-~~-----GAd-~~--in~~~~~~~~~~~~~~~~--   95 (175)
T d1cdoa2          28 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK-VF-----GAT-DF--VNPNDHSEPISQVLSKMT--   95 (175)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT-----TCC-EE--ECGGGCSSCHHHHHHHHH--
T ss_pred             CCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHH-Hc-----CCc-EE--EcCCCcchhHHHHHHhhc--
Confidence            4889999986 7788888888888887 8999999998875543 22     322 22  24433332 233333222  


Q ss_pred             HhccCCCCCeeEEEecCCc
Q 017812          136 LLDSDMHSSIQLLINNAGI  154 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~  154 (365)
                            .+.+|+++.+.|.
T Consensus        96 ------~~G~d~vid~~G~  108 (175)
T d1cdoa2          96 ------NGGVDFSLECVGN  108 (175)
T ss_dssp             ------TSCBSEEEECSCC
T ss_pred             ------cCCcceeeeecCC
Confidence                  3679999999995

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.80  E-value=0.0022  Score=50.31  Aligned_cols=41  Identities=24%  Similarity=0.254  Sum_probs=35.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSET   99 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~   99 (365)
                      .|.+|+|.|+ |+||...+..+...|++|+++++++++++.+
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~   67 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELA   67 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhh
Confidence            3789999875 8899999998889999999999999887654

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=96.80  E-value=0.0031  Score=50.11  Aligned_cols=42  Identities=21%  Similarity=0.143  Sum_probs=37.0

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHH
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMAD  102 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~  102 (365)
                      |++-|.|| |.+|.++|..|+++|++|.+.+|++++.+...+.
T Consensus         2 k~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~   43 (184)
T d1bg6a2           2 KTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDR   43 (184)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             CEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHc
Confidence            68899998 7899999999999999999999998887665543

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.73  E-value=0.0011  Score=48.59  Aligned_cols=40  Identities=13%  Similarity=0.243  Sum_probs=35.5

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCch
Q 017812           54 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH   94 (365)
Q Consensus        54 ~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~   94 (365)
                      ..+++||.|+|.|++. +|..-|+.|.+.|++|++++....
T Consensus         7 ~l~l~~k~vlVvG~G~-va~~ka~~ll~~ga~v~v~~~~~~   46 (113)
T d1pjqa1           7 FCQLRDRDCLIVGGGD-VAERKARLLLEAGARLTVNALTFI   46 (113)
T ss_dssp             EECCBTCEEEEECCSH-HHHHHHHHHHHTTBEEEEEESSCC
T ss_pred             EEEeCCCEEEEECCCH-HHHHHHHHHHHCCCeEEEEeccCC
Confidence            3468999999999865 999999999999999999988765

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=96.66  E-value=0.00051  Score=56.05  Aligned_cols=43  Identities=12%  Similarity=0.282  Sum_probs=38.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSET   99 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~   99 (365)
                      +++||+|+|-| .|.+|..+|+.|.+.|++|++.+.+.+++...
T Consensus        24 ~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~   66 (201)
T d1c1da1          24 SLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHA   66 (201)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHHH
Confidence            58999999998 67799999999999999999999988766543

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=96.58  E-value=0.0011  Score=46.76  Aligned_cols=38  Identities=8%  Similarity=0.077  Sum_probs=34.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCch
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH   94 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~   94 (365)
                      +++||+++|.|. |.-|+++|+.|+++|++|++.+.+..
T Consensus         2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~   39 (93)
T d2jfga1           2 DYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMT   39 (93)
T ss_dssp             CCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSS
T ss_pred             CcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcC
Confidence            578999999998 66899999999999999999998654

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=96.48  E-value=0.0019  Score=50.93  Aligned_cols=45  Identities=24%  Similarity=0.308  Sum_probs=39.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADI  103 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l  103 (365)
                      ++|.|+|-|+ ||.|++++..|.+.|+ +|.++.|+.++.+++.+.+
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~   61 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY   61 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhh
Confidence            4678999987 8999999999999997 8999999999887776654

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.26  E-value=0.037  Score=42.50  Aligned_cols=116  Identities=12%  Similarity=0.172  Sum_probs=63.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHCCC-------EEEEEecCc--hhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHH
Q 017812           61 VCIVTGATSGLGAAAAYALSREGF-------HVVLVGRSS--HLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDS  131 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G~-------~Vil~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~  131 (365)
                      .|.|+||+|.+|.++|..|+..+.       .+++.+.++  ++++....++...... ....+.  .++...  +    
T Consensus         5 KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~-~~~~~~--~~~~~~--~----   75 (154)
T d5mdha1           5 RVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALP-LLKDVI--ATDKEE--I----   75 (154)
T ss_dssp             EEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCT-TEEEEE--EESCHH--H----
T ss_pred             EEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccccc-cccccc--cCcccc--c----
Confidence            699999999999999999987652       356665544  3344444333332211 222221  121111  1    


Q ss_pred             HHHHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhc-CCCCCeEEEEcC
Q 017812          132 LQQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKN-SPVPSRIVNVTS  202 (365)
Q Consensus       132 ~~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~-~~~~g~iV~vsS  202 (365)
                               .....|++|..||......+ +.+   +.++.|.    .+.+.+.+.+.+ .+..+.++.+|-
T Consensus        76 ---------~~~~~dvVVitag~~~~~g~-sr~---dll~~N~----~i~k~~~~~i~k~a~~~~~iivvsN  130 (154)
T d5mdha1          76 ---------AFKDLDVAILVGSMPRRDGM-ERK---DLLKANV----KIFKCQGAALDKYAKKSVKVIVVGN  130 (154)
T ss_dssp             ---------HTTTCSEEEECCSCCCCTTC-CTT---TTHHHHH----HHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             ---------ccCCceEEEEecccCCCCCC-chh---HHHHHhH----HHHHHHHHHHHhhCCCceEEEEecC
Confidence                     12458999999998644322 222   2344454    455555555544 232355666653

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.23  E-value=0.0046  Score=49.84  Aligned_cols=45  Identities=27%  Similarity=0.381  Sum_probs=39.5

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHh
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITS  105 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~  105 (365)
                      |.|.|.|| |-+|..+|..++..|++|++.+++++.+++..+.+.+
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i~~   49 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEE   49 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhHHH
Confidence            67899998 7799999999999999999999999888877766643

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.15  E-value=0.014  Score=45.40  Aligned_cols=69  Identities=22%  Similarity=0.188  Sum_probs=46.4

Q ss_pred             EEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHH--------hhcCCCceEEEEecCCChhhHHHHHHHHH
Q 017812           62 CIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADIT--------SRNKDARLEAFQVDLSSFQSVLKFKDSLQ  133 (365)
Q Consensus        62 vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~--------~~~~~~~~~~~~~Dls~~~~v~~~~~~~~  133 (365)
                      +.|-|+ |-+|..+|+.|.++|++|++.+|+++..+++.+.-.        +...+.++.++.+   ..+.+.++++++.
T Consensus         3 I~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~DiIilav---p~~~~~~vl~~l~   78 (165)
T d2f1ka2           3 IGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFLCT---PIQLILPTLEKLI   78 (165)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGGTTCSEEEECS---CHHHHHHHHHHHG
T ss_pred             EEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeeeecccccccccccccC---cHhhhhhhhhhhh
Confidence            555555 889999999999999999999999887776544210        1111234444333   2456777777765


Q ss_pred             H
Q 017812          134 Q  134 (365)
Q Consensus       134 ~  134 (365)
                      .
T Consensus        79 ~   79 (165)
T d2f1ka2          79 P   79 (165)
T ss_dssp             G
T ss_pred             h
Confidence            5

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.02  E-value=0.039  Score=44.43  Aligned_cols=77  Identities=21%  Similarity=0.299  Sum_probs=58.2

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHH
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  133 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~  133 (365)
                      .+++|++||=-|+++|.   ++..++.+|+ +|+.++.+++.++.+.+.+...  +.+..++..|+.+.           
T Consensus        43 ~dl~g~~vLDlg~GtG~---l~i~a~~~g~~~v~~vdi~~~~~~~a~~N~~~~--~~~~~~~~~d~~~~-----------  106 (201)
T d1wy7a1          43 GDIEGKVVADLGAGTGV---LSYGALLLGAKEVICVEVDKEAVDVLIENLGEF--KGKFKVFIGDVSEF-----------  106 (201)
T ss_dssp             TSSTTCEEEEETCTTCH---HHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGG--TTSEEEEESCGGGC-----------
T ss_pred             CCCCCCEEEECcCcchH---HHHHHHHcCCCEEEEEcCcHHHHHHHHHHHHHc--CCCceEEECchhhh-----------
Confidence            35789999999987662   3344567886 8999999999888888877654  45778888886542           


Q ss_pred             HHHhccCCCCCeeEEEecCCcc
Q 017812          134 QWLLDSDMHSSIQLLINNAGIL  155 (365)
Q Consensus       134 ~~~~~~~~~~~id~lv~nAG~~  155 (365)
                              .+++|++|.|.-..
T Consensus       107 --------~~~fD~Vi~nPP~~  120 (201)
T d1wy7a1         107 --------NSRVDIVIMNPPFG  120 (201)
T ss_dssp             --------CCCCSEEEECCCCS
T ss_pred             --------CCcCcEEEEcCccc
Confidence                    25799999998653

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.93  E-value=0.038  Score=47.68  Aligned_cols=76  Identities=16%  Similarity=0.231  Sum_probs=57.9

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      ++|++||-.|++.|+   ++..+|+.|+ +|+.++.++. ...+.+...+.+...++.++..|+.+...           
T Consensus        34 ~~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~-~~~a~~~~~~~~~~~~i~~~~~~~~~l~~-----------   98 (311)
T d2fyta1          34 FKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEI-LYQAMDIIRLNKLEDTITLIKGKIEEVHL-----------   98 (311)
T ss_dssp             TTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTH-HHHHHHHHHHTTCTTTEEEEESCTTTSCC-----------
T ss_pred             CCcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHH-HHHHHHHHHHhCCCccceEEEeeHHHhcC-----------
Confidence            578999999999886   5777888997 8999998875 34555555565556789999999887542           


Q ss_pred             HhccCCCCCeeEEEecC
Q 017812          136 LLDSDMHSSIQLLINNA  152 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nA  152 (365)
                           ...++|++|..-
T Consensus        99 -----~~~~~D~Ivse~  110 (311)
T d2fyta1          99 -----PVEKVDVIISEW  110 (311)
T ss_dssp             -----SCSCEEEEEECC
T ss_pred             -----ccccceEEEEee
Confidence                 235799999753

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=95.92  E-value=0.0098  Score=45.68  Aligned_cols=40  Identities=18%  Similarity=0.318  Sum_probs=35.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLS   97 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~   97 (365)
                      +-+.+.|.||.|-||..+|+.|.+.|++|.+.+|+.....
T Consensus         8 ~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~   47 (152)
T d2pv7a2           8 DIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVA   47 (152)
T ss_dssp             TCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGH
T ss_pred             CCCeEEEEcCCCHHHHHHHHHHHHcCCCcEeccccccccc
Confidence            4568999999999999999999999999999999876543

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.89  E-value=0.004  Score=56.69  Aligned_cols=81  Identities=15%  Similarity=0.280  Sum_probs=61.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecC-------------------chhHHHHHHHHHhhcCCCceEEEE
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRS-------------------SHLLSETMADITSRNKDARLEAFQ  116 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~  116 (365)
                      +++..|+|.|+ ||||.++++.|+..|. ++.+++.+                   ..+.+.+.+.+++.+|..++..+.
T Consensus        35 l~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~np~v~i~~~~  113 (426)
T d1yovb1          35 LDTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHF  113 (426)
T ss_dssp             HHHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEEC
T ss_pred             HhcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhhCCCCceEeee
Confidence            45667999999 6799999999999998 89998873                   236777888888888888888888


Q ss_pred             ecCCChhhHHHHHHHHHHHHhccCCCCCeeEEEecCC
Q 017812          117 VDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAG  153 (365)
Q Consensus       117 ~Dls~~~~v~~~~~~~~~~~~~~~~~~~id~lv~nAG  153 (365)
                      .++.+...  .++             ...|++|++..
T Consensus       114 ~~i~~~~~--~~~-------------~~~DlVi~~~D  135 (426)
T d1yovb1         114 NKIQDFND--TFY-------------RQFHIIVCGLD  135 (426)
T ss_dssp             SCGGGBCH--HHH-------------TTCSEEEECCS
T ss_pred             ccccchHH--HHH-------------HhcchheeccC
Confidence            77765431  222             24788886654

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=95.88  E-value=0.01  Score=49.63  Aligned_cols=64  Identities=20%  Similarity=0.317  Sum_probs=52.4

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecC-------------------chhHHHHHHHHHhhcCCCceEEEE
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRS-------------------SHLLSETMADITSRNKDARLEAFQ  116 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~  116 (365)
                      +++++|+|.| .||+|..+|..|++.|. +++++|.+                   ..+.+.+.+.+++.+|..++..+.
T Consensus        28 L~~~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~~~i~~~~  106 (247)
T d1jw9b_          28 LKDSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVN  106 (247)
T ss_dssp             HHHCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred             HhCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcccchhhhh
Confidence            6788999999 57899999999999998 89998863                   247888888898888887777776


Q ss_pred             ecCCC
Q 017812          117 VDLSS  121 (365)
Q Consensus       117 ~Dls~  121 (365)
                      ..+++
T Consensus       107 ~~~~~  111 (247)
T d1jw9b_         107 ALLDD  111 (247)
T ss_dssp             SCCCH
T ss_pred             hhhhh
Confidence            55554

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=95.80  E-value=0.03  Score=44.28  Aligned_cols=64  Identities=16%  Similarity=0.154  Sum_probs=50.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhc-----------CCCceEEEEecCCChhh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRN-----------KDARLEAFQVDLSSFQS  124 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~-----------~~~~~~~~~~Dls~~~~  124 (365)
                      .|.+||.-||+.|   ..+..||++|++|+.++.+++.++.+.+...+..           .+....++..|..+...
T Consensus        20 ~~~rvLd~GCG~G---~~a~~la~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~   94 (201)
T d1pjza_          20 PGARVLVPLCGKS---QDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTA   94 (201)
T ss_dssp             TTCEEEETTTCCS---HHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTH
T ss_pred             CCCEEEEecCcCC---HHHHHHHHcCCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceeccccccccc
Confidence            4789999999887   4788999999999999999998888877764421           12345778888887654

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=95.78  E-value=0.036  Score=44.51  Aligned_cols=72  Identities=15%  Similarity=0.142  Sum_probs=54.3

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHH
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQ  133 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~  133 (365)
                      .+++|++||=-|+++|+   ++..++..|+ +|+.++.+++.++.+.+.+      .++.++.+|+.+.           
T Consensus        45 ~dl~Gk~VLDlGcGtG~---l~i~a~~~ga~~V~~vDid~~a~~~ar~N~------~~~~~~~~D~~~l-----------  104 (197)
T d1ne2a_          45 GNIGGRSVIDAGTGNGI---LACGSYLLGAESVTAFDIDPDAIETAKRNC------GGVNFMVADVSEI-----------  104 (197)
T ss_dssp             TSSBTSEEEEETCTTCH---HHHHHHHTTBSEEEEEESCHHHHHHHHHHC------TTSEEEECCGGGC-----------
T ss_pred             CCCCCCEEEEeCCCCcH---HHHHHHHcCCCcccccccCHHHHHHHHHcc------ccccEEEEehhhc-----------
Confidence            36889999999999883   3455777886 7999999988776655442      3577888998542           


Q ss_pred             HHHhccCCCCCeeEEEecCCc
Q 017812          134 QWLLDSDMHSSIQLLINNAGI  154 (365)
Q Consensus       134 ~~~~~~~~~~~id~lv~nAG~  154 (365)
                              .+++|++|.|.-.
T Consensus       105 --------~~~fD~Vi~NPPf  117 (197)
T d1ne2a_         105 --------SGKYDTWIMNPPF  117 (197)
T ss_dssp             --------CCCEEEEEECCCC
T ss_pred             --------CCcceEEEeCccc
Confidence                    2579999999754

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=95.71  E-value=0.028  Score=44.18  Aligned_cols=73  Identities=16%  Similarity=0.206  Sum_probs=52.7

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHH---------------HhhcCCCceEEEEecCCChhh
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADI---------------TSRNKDARLEAFQVDLSSFQS  124 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l---------------~~~~~~~~~~~~~~Dls~~~~  124 (365)
                      +.|-|.|- |-+|..+|++|++.|++|++.+|++++.+++.++-               .+..  .....+...+.+.+.
T Consensus         3 ~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~--~~~~~ii~~~~~~~~   79 (176)
T d2pgda2           3 ADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKL--KKPRRIILLVKAGQA   79 (176)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHB--CSSCEEEECSCTTHH
T ss_pred             CcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhh--cccceEEEecCchHH
Confidence            34666776 77999999999999999999999999888765431               1111  122345556677778


Q ss_pred             HHHHHHHHHHH
Q 017812          125 VLKFKDSLQQW  135 (365)
Q Consensus       125 v~~~~~~~~~~  135 (365)
                      +..+.+.+...
T Consensus        80 v~~v~~~l~~~   90 (176)
T d2pgda2          80 VDNFIEKLVPL   90 (176)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHhc
Confidence            88888777663

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=95.66  E-value=0.0064  Score=48.69  Aligned_cols=45  Identities=20%  Similarity=0.337  Sum_probs=38.8

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHh
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITS  105 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~  105 (365)
                      |.|.|.|| |-||..+|..++..|++|++.+++++.+++..+.+..
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~   49 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAK   49 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhhhhh
Confidence            45888888 7799999999999999999999999888877666543

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.58  E-value=0.076  Score=46.05  Aligned_cols=120  Identities=10%  Similarity=0.086  Sum_probs=77.4

Q ss_pred             CCCEEEEecCC-ChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           58 KRPVCIVTGAT-SGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        58 ~~k~vlITGas-sGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      .|++||=.|+. |+++.+    +++.|+ +|+.++.+++.++.+.+.+...+-..+++++..|+.+      ....... 
T Consensus       145 ~g~~VLDl~~g~G~~si~----~a~~ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~~~------~~~~~~~-  213 (324)
T d2as0a2         145 PGDRVLDVFTYTGGFAIH----AAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFE------EMEKLQK-  213 (324)
T ss_dssp             TTCEEEETTCTTTHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHH------HHHHHHH-
T ss_pred             CCCeeecccCcccchhhh----hhhcCCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeechhhh------hhHHHHh-
Confidence            37889877775 555544    456776 8999999999999988888776545578888887653      2222222 


Q ss_pred             HhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCc
Q 017812          136 LLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFT  204 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~  204 (365)
                           ...+.|++|.++......    ..+....    ......+.+.+++.++.   +|.+++.|...
T Consensus       214 -----~~~~fD~Vi~DpP~~~~~----~~~~~~~----~~~y~~l~~~a~~ll~p---GG~lv~~s~s~  266 (324)
T d2as0a2         214 -----KGEKFDIVVLDPPAFVQH----EKDLKAG----LRAYFNVNFAGLNLVKD---GGILVTCSCSQ  266 (324)
T ss_dssp             -----TTCCEEEEEECCCCSCSS----GGGHHHH----HHHHHHHHHHHHTTEEE---EEEEEEEECCT
T ss_pred             -----ccCCCCchhcCCccccCC----HHHHHHH----HHHHHHHHHHHHHHcCC---CcEEEEEeCCc
Confidence                 456899999988754332    2222221    22344566777777654   46766665433

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=95.54  E-value=0.022  Score=45.59  Aligned_cols=83  Identities=13%  Similarity=0.153  Sum_probs=62.8

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhc
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  138 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~  138 (365)
                      +..+=+|-|+||..+++...+ . +.+|+.++++++.++.+.+.+...  +.++.++..++++.+.+   ....      
T Consensus        25 ~~~lD~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l~~~--~~r~~~~~~~f~~~~~~---~~~~------   91 (192)
T d1m6ya2          25 KIILDCTVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKEF--SDRVSLFKVSYREADFL---LKTL------   91 (192)
T ss_dssp             CEEEETTCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGGG--TTTEEEEECCGGGHHHH---HHHT------
T ss_pred             CEEEEecCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhhccc--cccccchhHHHhhHHHH---HHHc------
Confidence            334447889999999998877 3 579999999999988887776554  46799999998875443   2221      


Q ss_pred             cCCCCCeeEEEecCCccc
Q 017812          139 SDMHSSIQLLINNAGILA  156 (365)
Q Consensus       139 ~~~~~~id~lv~nAG~~~  156 (365)
                        ...++|.++...|+..
T Consensus        92 --~~~~vdgIl~DlGvSs  107 (192)
T d1m6ya2          92 --GIEKVDGILMDLGVST  107 (192)
T ss_dssp             --TCSCEEEEEEECSCCH
T ss_pred             --CCCCcceeeeccchhH
Confidence              3478999999999853

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=95.53  E-value=0.032  Score=46.24  Aligned_cols=105  Identities=13%  Similarity=0.076  Sum_probs=73.4

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      ..+++||=.||+.|.   ++..|+++|.+|+.++.+++.++.+.+.+...  +.++.++..|+.+.+             
T Consensus        36 ~~~~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~~--~~~v~~~~~d~~~~~-------------   97 (246)
T d1y8ca_          36 LVFDDYLDLACGTGN---LTENLCPKFKNTWAVDLSQEMLSEAENKFRSQ--GLKPRLACQDISNLN-------------   97 (246)
T ss_dssp             CCTTEEEEETCTTST---THHHHGGGSSEEEEECSCHHHHHHHHHHHHHT--TCCCEEECCCGGGCC-------------
T ss_pred             CCCCeEEEEeCcCCH---HHHHHHHhCCccEeeccchhhhhhcccccccc--Cccceeeccchhhhc-------------
Confidence            456789999999885   78899999999999999999888877776654  446889999987653             


Q ss_pred             hccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEE
Q 017812          137 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVN  199 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~  199 (365)
                          ..++.|++++..+.....  .+.++.+.           +++.+..+++.   +|.+|+
T Consensus        98 ----~~~~fD~i~~~~~~~~~~--~~~~~~~~-----------~l~~~~~~Lkp---gG~~i~  140 (246)
T d1y8ca_          98 ----INRKFDLITCCLDSTNYI--IDSDDLKK-----------YFKAVSNHLKE---GGVFIF  140 (246)
T ss_dssp             ----CSCCEEEEEECTTGGGGC--CSHHHHHH-----------HHHHHHTTEEE---EEEEEE
T ss_pred             ----ccccccccceeeeeeecc--CCHHHHHH-----------HHHHHHHhCCC---CeEEEE
Confidence                235799999765543221  12333332           34555556554   467665

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=95.48  E-value=0.017  Score=46.45  Aligned_cols=40  Identities=15%  Similarity=0.128  Sum_probs=35.1

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCch
Q 017812           54 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH   94 (365)
Q Consensus        54 ~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~   94 (365)
                      ..++.||++.|.|- |.||+++|+.|..-|++|+..++...
T Consensus        38 g~el~gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~~   77 (197)
T d1j4aa1          38 GREVRDQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFRN   77 (197)
T ss_dssp             BCCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             CccccCCeEEEecc-cccchhHHHhHhhhcccccccCcccc
Confidence            35689999999997 56999999999999999999987654

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=95.44  E-value=0.58  Score=40.02  Aligned_cols=118  Identities=12%  Similarity=0.124  Sum_probs=74.7

Q ss_pred             CCCCEEEEecCC-ChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGAT-SGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        57 ~~~k~vlITGas-sGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      .+|+.||=.++. ||++.+    ++..|++|+.++.++..++.+.+.+...+- .++.++..|..+..      +.... 
T Consensus       144 ~~g~rVLDl~~gtG~~s~~----~a~g~~~V~~vD~s~~al~~a~~n~~~ngl-~~~~~i~~d~~~~~------~~~~~-  211 (318)
T d1wxxa2         144 FRGERALDVFSYAGGFALH----LALGFREVVAVDSSAEALRRAEENARLNGL-GNVRVLEANAFDLL------RRLEK-  211 (318)
T ss_dssp             CCEEEEEEETCTTTHHHHH----HHHHEEEEEEEESCHHHHHHHHHHHHHTTC-TTEEEEESCHHHHH------HHHHH-
T ss_pred             hCCCeeeccCCCCcHHHHH----HHhcCCcEEeecchHHHHHHHHHHHHHcCC-CCcceeeccHHHHh------hhhHh-
Confidence            468899977776 444433    455567999999999999998888876543 46788888875432      22222 


Q ss_pred             HhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcC
Q 017812          136 LLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS  202 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS  202 (365)
                           ...+.|++|.++........    +..    .-......+.+.+++.++.   +|.+++.|.
T Consensus       212 -----~~~~fD~Vi~DpP~~~~~~~----~~~----~~~~~~~~l~~~a~~lLkp---GG~Lv~~sc  262 (318)
T d1wxxa2         212 -----EGERFDLVVLDPPAFAKGKK----DVE----RAYRAYKEVNLRAIKLLKE---GGILATASC  262 (318)
T ss_dssp             -----TTCCEEEEEECCCCSCCSTT----SHH----HHHHHHHHHHHHHHHTEEE---EEEEEEEEC
T ss_pred             -----hhcCCCEEEEcCCccccchH----HHH----HHHHHHHHHHHHHHHHcCC---CCEEEEEeC
Confidence                 34689999999865433211    111    1112233566666666654   467666554

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.43  E-value=0.019  Score=45.64  Aligned_cols=41  Identities=22%  Similarity=0.067  Sum_probs=35.8

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchh
Q 017812           54 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHL   95 (365)
Q Consensus        54 ~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~   95 (365)
                      ..++.||++.|.|. |.||+++|+.+..-|++|+..++....
T Consensus        39 ~~~l~~k~vgiiG~-G~IG~~va~~~~~fg~~v~~~d~~~~~   79 (184)
T d1ygya1          39 GTEIFGKTVGVVGL-GRIGQLVAQRIAAFGAYVVAYDPYVSP   79 (184)
T ss_dssp             BCCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCH
T ss_pred             cccccceeeeeccc-cchhHHHHHHhhhccceEEeecCCCCh
Confidence            45688999999995 789999999999999999999987654

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.41  E-value=0.071  Score=43.96  Aligned_cols=75  Identities=13%  Similarity=0.174  Sum_probs=59.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .+++||=-||+.|   ..+..|+++|++|+.++.+++-++.+.+.+...  +.++.++..|+.+...             
T Consensus        41 ~~~~iLDiGcGtG---~~~~~l~~~~~~v~gvD~s~~mi~~a~~~~~~~--~~~i~~~~~d~~~l~~-------------  102 (251)
T d1wzna1          41 EVRRVLDLACGTG---IPTLELAERGYEVVGLDLHEEMLRVARRKAKER--NLKIEFLQGDVLEIAF-------------  102 (251)
T ss_dssp             CCCEEEEETCTTC---HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCCEEEESCGGGCCC-------------
T ss_pred             CCCEEEEeCCCCC---ccchhhcccceEEEEEeeccccccccccccccc--cccchheehhhhhccc-------------
Confidence            4678999999887   556789999999999999998888888877665  4478899999877541             


Q ss_pred             ccCCCCCeeEEEecCCc
Q 017812          138 DSDMHSSIQLLINNAGI  154 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~  154 (365)
                          .+..|++++.-+.
T Consensus       103 ----~~~fD~I~~~~~~  115 (251)
T d1wzna1         103 ----KNEFDAVTMFFST  115 (251)
T ss_dssp             ----CSCEEEEEECSSG
T ss_pred             ----ccccchHhhhhhh
Confidence                2469988876443

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.37  E-value=0.079  Score=42.69  Aligned_cols=75  Identities=20%  Similarity=0.208  Sum_probs=58.6

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhc
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  138 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~  138 (365)
                      +.+||=-||++|.   ++..|++.|++|+.++.+++.++.+.+.....  +..+..+..|..+...              
T Consensus        38 ~~~ILDiGcG~G~---~~~~la~~~~~v~giD~S~~~i~~ak~~~~~~--~~~~~~~~~d~~~l~~--------------   98 (226)
T d1ve3a1          38 RGKVLDLACGVGG---FSFLLEDYGFEVVGVDISEDMIRKAREYAKSR--ESNVEFIVGDARKLSF--------------   98 (226)
T ss_dssp             CCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCCEEEECCTTSCCS--------------
T ss_pred             CCEEEEECCCcch---hhhhHhhhhcccccccccccchhhhhhhhccc--cccccccccccccccc--------------
Confidence            3578999999887   67788999999999999998888887777665  3456778888887541              


Q ss_pred             cCCCCCeeEEEecCCc
Q 017812          139 SDMHSSIQLLINNAGI  154 (365)
Q Consensus       139 ~~~~~~id~lv~nAG~  154 (365)
                        .....|+++++..+
T Consensus        99 --~~~~fD~I~~~~~l  112 (226)
T d1ve3a1          99 --EDKTFDYVIFIDSI  112 (226)
T ss_dssp             --CTTCEEEEEEESCG
T ss_pred             --cCcCceEEEEecch
Confidence              34679999987654

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.33  E-value=0.0074  Score=46.38  Aligned_cols=36  Identities=22%  Similarity=0.393  Sum_probs=32.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecC
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRS   92 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~   92 (365)
                      .++||+|||.|| |.+|..-|+.|.+.|++|++++..
T Consensus        10 ~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1          10 QLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             CCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             eeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            588999999999 559999999999999999999764

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.30  E-value=0.1  Score=44.94  Aligned_cols=77  Identities=13%  Similarity=0.190  Sum_probs=56.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      .+|++||-.|++.|+   ++..+|+.|+ +|+.++.++ ....+.+.+...+-..++.++..|..+.+.           
T Consensus        32 ~~~~~VLDiGcG~G~---ls~~aa~~Ga~~V~avd~s~-~~~~a~~~~~~n~~~~~v~~~~~~~~~~~~-----------   96 (316)
T d1oria_          32 FKDKVVLDVGSGTGI---LCMFAAKAGARKVIGIECSS-ISDYAVKIVKANKLDHVVTIIKGKVEEVEL-----------   96 (316)
T ss_dssp             HTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCC-----------
T ss_pred             CCcCEEEEEecCCcH---HHHHHHHhCCCEEEEEcCcH-HHhhhhhHHHHhCCccccceEeccHHHccc-----------
Confidence            468999999999885   5677888897 799999875 455555555555545679999999887542           


Q ss_pred             HhccCCCCCeeEEEecCC
Q 017812          136 LLDSDMHSSIQLLINNAG  153 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG  153 (365)
                           ...++|+++..-.
T Consensus        97 -----~~~~~D~ivs~~~  109 (316)
T d1oria_          97 -----PVEKVDIIISEWM  109 (316)
T ss_dssp             -----SSSCEEEEEECCC
T ss_pred             -----ccceeEEEeeeee
Confidence                 3367999987643

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=95.29  E-value=0.1  Score=39.73  Aligned_cols=78  Identities=15%  Similarity=0.188  Sum_probs=58.1

Q ss_pred             CCCCEEEEecCCCh-HHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSG-LGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        57 ~~~k~vlITGassG-IG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      ++|+.||=.|+.+| +|.    +.+.+|+ +|+.++.+++..+.+.+.+...+...++.+++.|..+.      .+   .
T Consensus        13 ~~g~~vlDl~~GtG~~~i----ea~~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~~D~~~~------l~---~   79 (152)
T d2esra1          13 FNGGRVLDLFAGSGGLAI----EAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERA------ID---C   79 (152)
T ss_dssp             CCSCEEEEETCTTCHHHH----HHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHH------HH---H
T ss_pred             CCCCeEEEcCCccCHHHH----HHHHhCcceeeeehhchhhhhhhhhhhhhcccccchhhhccccccc------cc---c
Confidence            67899997777655 555    4567887 89999999999988888887776566789999885432      21   1


Q ss_pred             HHhccCCCCCeeEEEecCC
Q 017812          135 WLLDSDMHSSIQLLINNAG  153 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG  153 (365)
                            ...+.|+++.+..
T Consensus        80 ------~~~~fDiIf~DPP   92 (152)
T d2esra1          80 ------LTGRFDLVFLDPP   92 (152)
T ss_dssp             ------BCSCEEEEEECCS
T ss_pred             ------cccccceeEechh
Confidence                  3467999998754

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=95.25  E-value=0.18  Score=38.89  Aligned_cols=80  Identities=21%  Similarity=0.216  Sum_probs=57.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      ..+.-.|+|-|| |--|++.++-....|++|.+.+.+.++++++.+....     .+.+.   .++.+.+.+   .+.  
T Consensus        29 gv~pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~-----~~~~~---~~~~~~l~~---~~~--   94 (168)
T d1pjca1          29 GVKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS-----RVELL---YSNSAEIET---AVA--   94 (168)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG-----GSEEE---ECCHHHHHH---HHH--
T ss_pred             CCCCcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcc-----cceee---hhhhhhHHH---hhc--
Confidence            455678999998 4589999999999999999999999988877665532     22222   334444433   222  


Q ss_pred             HhccCCCCCeeEEEecCCcccC
Q 017812          136 LLDSDMHSSIQLLINNAGILAT  157 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~~  157 (365)
                              .-|++|..+=+.+.
T Consensus        95 --------~aDivI~aalipG~  108 (168)
T d1pjca1          95 --------EADLLIGAVLVPGR  108 (168)
T ss_dssp             --------TCSEEEECCCCTTS
T ss_pred             --------cCcEEEEeeecCCc
Confidence                    37999999987643

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=95.03  E-value=0.013  Score=43.58  Aligned_cols=70  Identities=13%  Similarity=0.116  Sum_probs=50.7

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhcc
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  139 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~  139 (365)
                      |+++|.|. +.+|.+++++|  +|.+|+++..+++..+...    .    ..+.++..|.++++.++++           
T Consensus         1 kHivI~G~-g~~g~~l~~~L--~~~~i~vi~~d~~~~~~~~----~----~~~~~i~Gd~~~~~~L~~a-----------   58 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLREL--RGSEVFVLAEDENVRKKVL----R----SGANFVHGDPTRVSDLEKA-----------   58 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTS--CGGGEEEEESCTTHHHHHH----H----TTCEEEESCTTSHHHHHHT-----------
T ss_pred             CEEEEECC-CHHHHHHHHHH--cCCCCEEEEcchHHHHHHH----h----cCccccccccCCHHHHHHh-----------
Confidence            56888886 66999999999  4667888999988765442    2    2467889999998776553           


Q ss_pred             CCCCCeeEEEecC
Q 017812          140 DMHSSIQLLINNA  152 (365)
Q Consensus       140 ~~~~~id~lv~nA  152 (365)
                       ....-+.+|...
T Consensus        59 -~i~~A~~vi~~~   70 (129)
T d2fy8a1          59 -NVRGARAVIVNL   70 (129)
T ss_dssp             -TCTTCSEEEECC
T ss_pred             -hhhcCcEEEEec
Confidence             234566777543

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=94.83  E-value=0.053  Score=45.33  Aligned_cols=73  Identities=21%  Similarity=0.212  Sum_probs=55.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .|++||=.|+++|+   ++..+++.|++|+.++.++..++.+.+..+..  +.+..++..|+.+.         .     
T Consensus       120 ~g~~VLDiGcGsG~---l~i~aa~~g~~V~gvDis~~av~~A~~na~~n--~~~~~~~~~d~~~~---------~-----  180 (254)
T d2nxca1         120 PGDKVLDLGTGSGV---LAIAAEKLGGKALGVDIDPMVLPQAEANAKRN--GVRPRFLEGSLEAA---------L-----  180 (254)
T ss_dssp             TTCEEEEETCTTSH---HHHHHHHTTCEEEEEESCGGGHHHHHHHHHHT--TCCCEEEESCHHHH---------G-----
T ss_pred             ccCEEEEcccchhH---HHHHHHhcCCEEEEEECChHHHHHHHHHHHHc--CCceeEEecccccc---------c-----
Confidence            58899999999986   34567888999999999999999888887665  34566777664211         1     


Q ss_pred             ccCCCCCeeEEEecC
Q 017812          138 DSDMHSSIQLLINNA  152 (365)
Q Consensus       138 ~~~~~~~id~lv~nA  152 (365)
                         ..++.|+++.|.
T Consensus       181 ---~~~~fD~V~ani  192 (254)
T d2nxca1         181 ---PFGPFDLLVANL  192 (254)
T ss_dssp             ---GGCCEEEEEEEC
T ss_pred             ---cccccchhhhcc
Confidence               236799999873

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=94.60  E-value=0.34  Score=41.38  Aligned_cols=83  Identities=10%  Similarity=0.041  Sum_probs=57.0

Q ss_pred             CCCEEEEecCC-ChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCC-CceEEEEecCCChhhHHHHHHHHHHH
Q 017812           58 KRPVCIVTGAT-SGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKD-ARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        58 ~~k~vlITGas-sGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      +++.||=..+. |+++.    .+++.|++|+.++.++..++.+.+.+...+-. .++.++..|+.+      +++...+ 
T Consensus       132 ~~~rVLdlf~~tG~~sl----~aa~~GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~D~~~------~l~~~~~-  200 (309)
T d2igta1         132 RPLKVLNLFGYTGVASL----VAAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMK------FIQREER-  200 (309)
T ss_dssp             SCCEEEEETCTTCHHHH----HHHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHH------HHHHHHH-
T ss_pred             CCCeEEEecCCCcHHHH----HHHhCCCeEEEEeChHHHHHHHHHhhhhhcccCCcEEEEeCCHHH------hHHHHhh-
Confidence            46788866665 44444    34568999999999999999888887665433 367888877643      2333322 


Q ss_pred             HhccCCCCCeeEEEecCCccc
Q 017812          136 LLDSDMHSSIQLLINNAGILA  156 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~  156 (365)
                           ...+.|++|.+.-.+.
T Consensus       201 -----~~~~fD~IilDPP~f~  216 (309)
T d2igta1         201 -----RGSTYDIILTDPPKFG  216 (309)
T ss_dssp             -----HTCCBSEEEECCCSEE
T ss_pred             -----cCCCCCEEEECCCccc
Confidence                 2467999999876553

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=94.59  E-value=0.09  Score=41.47  Aligned_cols=77  Identities=14%  Similarity=0.189  Sum_probs=58.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .|.+||=.|+++|   .++..|++.+.+|+.++.+++.++.+.+.++..+-..++.++..|..+..          .   
T Consensus        33 ~g~~VLDiGcGsG---~~s~~lA~~~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~gda~~~~----------~---   96 (186)
T d1l3ia_          33 KNDVAVDVGCGTG---GVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEAL----------C---   96 (186)
T ss_dssp             TTCEEEEESCTTS---HHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHH----------T---
T ss_pred             CCCEEEEEECCeE---cccccccccceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEECchhhcc----------c---
Confidence            4788998998877   34456677788999999999999999999887754568899988752211          1   


Q ss_pred             ccCCCCCeeEEEecCC
Q 017812          138 DSDMHSSIQLLINNAG  153 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG  153 (365)
                         .....|.++.+.+
T Consensus        97 ---~~~~~D~v~~~~~  109 (186)
T d1l3ia_          97 ---KIPDIDIAVVGGS  109 (186)
T ss_dssp             ---TSCCEEEEEESCC
T ss_pred             ---ccCCcCEEEEeCc
Confidence               3467999997754

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=94.57  E-value=0.035  Score=43.05  Aligned_cols=41  Identities=20%  Similarity=0.188  Sum_probs=36.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLL   96 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~   96 (365)
                      +++||+++|.|.|.=+|+-++..|.++|++|+.+......+
T Consensus        34 ~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~l   74 (166)
T d1b0aa1          34 DTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNL   74 (166)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCH
T ss_pred             ccccceEEEEeccccccHHHHHHHHHhhccccccccccchh
Confidence            47899999999999999999999999999999887655433

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=94.54  E-value=1.2  Score=37.96  Aligned_cols=118  Identities=12%  Similarity=0.070  Sum_probs=72.4

Q ss_pred             CCCEEEEecCC-ChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcC-CCceEEEEecCCChhhHHHHHHHHHH
Q 017812           58 KRPVCIVTGAT-SGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNK-DARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        58 ~~k~vlITGas-sGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      +|+.||=..+. ||++.    +.+..|+ .|+.++.++..++.+.+.+...+- ..++.+++.|+-+      .++...+
T Consensus       144 ~g~~VLdlf~~~G~~sl----~aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~~~------~l~~~~~  213 (317)
T d2b78a2         144 AGKTVLNLFSYTAAFSV----AAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFD------YFKYARR  213 (317)
T ss_dssp             BTCEEEEETCTTTHHHH----HHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHH------HHHHHHH
T ss_pred             CCCceeecCCCCcHHHH----HHHhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccHHH------HHHHHHh
Confidence            47888866665 55543    3456787 799999999999888888865543 2468888888742      2333333


Q ss_pred             HHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcC
Q 017812          135 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTS  202 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS  202 (365)
                            ...+.|++|.+.-...+......+.        ......+.+.+++.++.   +|.+++.|.
T Consensus       214 ------~~~~fD~Ii~DPP~f~~~~~~~~~~--------~~~~~~L~~~a~~ll~p---gG~l~~~sc  264 (317)
T d2b78a2         214 ------HHLTYDIIIIDPPSFARNKKEVFSV--------SKDYHKLIRQGLEILSE---NGLIIASTN  264 (317)
T ss_dssp             ------TTCCEEEEEECCCCC-----CCCCH--------HHHHHHHHHHHHHTEEE---EEEEEEEEC
T ss_pred             ------hcCCCCEEEEcChhhccchhHHHHH--------HHHHHHHHHHHHHHcCC---CCEEEEEeC
Confidence                  4568999999976543322111111        11334566777777765   356655443

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.48  E-value=0.028  Score=43.85  Aligned_cols=42  Identities=19%  Similarity=0.135  Sum_probs=37.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLS   97 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~   97 (365)
                      +++||.|+|.|.|.=+|+-+|..|+++|++|..+......+.
T Consensus        36 ~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~   77 (170)
T d1a4ia1          36 PIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLD   77 (170)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHH
T ss_pred             ccccceEEEEecCCccchHHHHHHHhccCceEEEecccccHH
Confidence            478999999999999999999999999999999988765543

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=94.31  E-value=0.023  Score=43.92  Aligned_cols=34  Identities=26%  Similarity=0.203  Sum_probs=30.9

Q ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEecCchh
Q 017812           61 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHL   95 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~   95 (365)
                      .|.|.|+ |.||..+|..|++.|++|.+++|+++.
T Consensus         2 kI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~   35 (167)
T d1ks9a2           2 KITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQP   35 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCS
T ss_pred             EEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHH
Confidence            4788888 999999999999999999999998764

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.28  E-value=0.081  Score=43.20  Aligned_cols=79  Identities=8%  Similarity=0.072  Sum_probs=57.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhh----------------cCCCceEEEEecCCC
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSR----------------NKDARLEAFQVDLSS  121 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~----------------~~~~~~~~~~~Dls~  121 (365)
                      .+..||.-||+.|   ..+..||++|++|+.++-+++.++.+.++....                ..+.++.++.+|+.+
T Consensus        45 ~~~rvLd~GCG~G---~~a~~LA~~G~~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~  121 (229)
T d2bzga1          45 SGLRVFFPLCGKA---VEMKWFADRGHSVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLYCCSIFD  121 (229)
T ss_dssp             CSCEEEETTCTTC---THHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCGGG
T ss_pred             CCCEEEEeCCCCc---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEEEcchhh
Confidence            5779999999887   568899999999999999998887776664321                113467888888876


Q ss_pred             hhhHHHHHHHHHHHHhccCCCCCeeEEEecCCc
Q 017812          122 FQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI  154 (365)
Q Consensus       122 ~~~v~~~~~~~~~~~~~~~~~~~id~lv~nAG~  154 (365)
                      ....               ..+..|+++.....
T Consensus       122 l~~~---------------~~~~fd~i~~~~~l  139 (229)
T d2bzga1         122 LPRT---------------NIGKFDMIWDRGAL  139 (229)
T ss_dssp             GGGS---------------CCCCEEEEEESSST
T ss_pred             cccc---------------ccCceeEEEEEEEE
Confidence            5431               34567777655443

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.19  E-value=0.32  Score=41.90  Aligned_cols=77  Identities=14%  Similarity=0.239  Sum_probs=57.0

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      .+|++||-.|++.|+   ++..+|++|+ +|++++.++ .++.+.+...+.+...++.++..|+.+.+-           
T Consensus        37 ~~~~~VLDlGcGtG~---ls~~aa~~Ga~~V~avd~s~-~~~~a~~~~~~~~~~~~i~~i~~~~~~l~~-----------  101 (328)
T d1g6q1_          37 FKDKIVLDVGCGTGI---LSMFAAKHGAKHVIGVDMSS-IIEMAKELVELNGFSDKITLLRGKLEDVHL-----------  101 (328)
T ss_dssp             HTTCEEEEETCTTSH---HHHHHHHTCCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCC-----------
T ss_pred             CCcCEEEEeCCCCCH---HHHHHHHhCCCEEEEEeCCH-HHHHHHHHHHHhCccccceEEEeehhhccC-----------
Confidence            368999999999884   4667788997 899998874 455555666666556789999999887531           


Q ss_pred             HhccCCCCCeeEEEecCC
Q 017812          136 LLDSDMHSSIQLLINNAG  153 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG  153 (365)
                           ...+.|+++..--
T Consensus       102 -----~~~~~D~i~se~~  114 (328)
T d1g6q1_         102 -----PFPKVDIIISEWM  114 (328)
T ss_dssp             -----SSSCEEEEEECCC
T ss_pred             -----cccceeEEEEEec
Confidence                 2357999987653

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=94.15  E-value=0.095  Score=38.73  Aligned_cols=73  Identities=16%  Similarity=0.209  Sum_probs=55.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEE-ecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhcc
Q 017812           61 VCIVTGATSGLGAAAAYALSREGFHVVLV-GRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDS  139 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G~~Vil~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~  139 (365)
                      .+.|.|++|-+|++++..+.++|++++.. +++...          ...+.+   +..|+|.++...+.++...+     
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~~----------~~~~~D---VvIDFS~p~~~~~~l~~~~~-----   63 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVE----------ELDSPD---VVIDFSSPEALPKTVDLCKK-----   63 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEEE----------ECSCCS---EEEECSCGGGHHHHHHHHHH-----
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcHH----------HhccCC---EEEEecCHHHHHHHHHHHHh-----
Confidence            48999999999999999999999987754 444321          111223   46799999999999998877     


Q ss_pred             CCCCCeeEEEecCCc
Q 017812          140 DMHSSIQLLINNAGI  154 (365)
Q Consensus       140 ~~~~~id~lv~nAG~  154 (365)
                         .++.+++-..|.
T Consensus        64 ---~~~p~ViGTTG~   75 (128)
T d1vm6a3          64 ---YRAGLVLGTTAL   75 (128)
T ss_dssp             ---HTCEEEECCCSC
T ss_pred             ---cCCCEEEEcCCC
Confidence               346788877775

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=94.08  E-value=0.11  Score=37.42  Aligned_cols=35  Identities=17%  Similarity=0.234  Sum_probs=30.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCch
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH   94 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~   94 (365)
                      .|.++|.|| |-||.++|..|++.|.+|.++.|.+.
T Consensus        22 p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          22 PKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEECC-CccceeeeeeecccccEEEEEEecce
Confidence            367888887 67999999999999999999998753

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=94.07  E-value=0.048  Score=44.75  Aligned_cols=47  Identities=19%  Similarity=0.257  Sum_probs=40.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHH
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADI  103 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l  103 (365)
                      +++|++|+|-|- |-+|..+|+.|.+.|++|+.++.+...++....+.
T Consensus        36 ~l~g~~v~IqG~-GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~   82 (230)
T d1leha1          36 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEE   82 (230)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhc
Confidence            588999999986 56999999999999999999999988776665543

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=93.83  E-value=0.085  Score=41.58  Aligned_cols=38  Identities=21%  Similarity=0.201  Sum_probs=34.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCch
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH   94 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~   94 (365)
                      .++||++.|-|.+. ||+.+|+.+...|++|+..+|++.
T Consensus        39 ~l~gk~vgIiG~G~-IG~~va~~l~~~g~~v~~~d~~~~   76 (181)
T d1qp8a1          39 LIQGEKVAVLGLGE-IGTRVGKILAALGAQVRGFSRTPK   76 (181)
T ss_dssp             CCTTCEEEEESCST-HHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             cccCceEEEecccc-ccccceeeeecccccccccccccc
Confidence            48899999999866 999999999999999999999754

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=93.83  E-value=0.18  Score=40.66  Aligned_cols=80  Identities=16%  Similarity=0.046  Sum_probs=59.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .|.+||-.|+.+|--.++..++...+.+|+.++.+++.++.+.+.+.... -.++.++..|..+...             
T Consensus        75 ~g~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~-~~n~~~~~~d~~~~~~-------------  140 (213)
T d1dl5a1          75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLG-IENVIFVCGDGYYGVP-------------  140 (213)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTT-CCSEEEEESCGGGCCG-------------
T ss_pred             ccceEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhc-ccccccccCchHHccc-------------
Confidence            47799999998887666665666566799999999999988888876653 3467777777654211             


Q ss_pred             ccCCCCCeeEEEecCCc
Q 017812          138 DSDMHSSIQLLINNAGI  154 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~  154 (365)
                         ..++.|.++.+++.
T Consensus       141 ---~~~~fD~I~~~~~~  154 (213)
T d1dl5a1         141 ---EFSPYDVIFVTVGV  154 (213)
T ss_dssp             ---GGCCEEEEEECSBB
T ss_pred             ---cccchhhhhhhccH
Confidence               23679999998876

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=93.82  E-value=0.15  Score=41.30  Aligned_cols=79  Identities=16%  Similarity=0.101  Sum_probs=62.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .|..||..|+.+|--.++.-+++  |.+|+.+.++++-.+.+.+.+.+.+ -.++.++..|..+-..             
T Consensus        78 ~g~~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~~g-~~nv~~~~gd~~~g~~-------------  141 (215)
T d1jg1a_          78 PGMNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERAG-VKNVHVILGDGSKGFP-------------  141 (215)
T ss_dssp             TTCCEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHHTT-CCSEEEEESCGGGCCG-------------
T ss_pred             ccceEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHHcC-CceeEEEECccccCCc-------------
Confidence            47789999999998888877776  5779999999888877777777654 4688999999875211             


Q ss_pred             ccCCCCCeeEEEecCCcc
Q 017812          138 DSDMHSSIQLLINNAGIL  155 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~  155 (365)
                         ..++.|.++.++++.
T Consensus       142 ---~~~pfD~Iiv~~a~~  156 (215)
T d1jg1a_         142 ---PKAPYDVIIVTAGAP  156 (215)
T ss_dssp             ---GGCCEEEEEECSBBS
T ss_pred             ---ccCcceeEEeecccc
Confidence               347899999998874

>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Thermotoga maritima [TaxId: 2336]

Probab=93.82  E-value=0.26  Score=41.30  Aligned_cols=78  Identities=15%  Similarity=0.149  Sum_probs=56.3

Q ss_pred             CEEEEecCCCh-HHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhc
Q 017812           60 PVCIVTGATSG-LGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  138 (365)
Q Consensus        60 k~vlITGassG-IG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~  138 (365)
                      ++++-.|++|| |+.+++ +  ...++|++++.+++.++-+.+..+..+-..++.+...|+.+...         .    
T Consensus       112 ~~vld~g~GsG~i~~~la-~--~~~~~v~a~Dis~~Al~~A~~Na~~~~~~~~~~i~~~~~~~~~~---------~----  175 (271)
T d1nv8a_         112 KTVADIGTGSGAIGVSVA-K--FSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFK---------E----  175 (271)
T ss_dssp             CEEEEESCTTSHHHHHHH-H--HSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGGG---------G----
T ss_pred             cEEEEeeeeeehhhhhhh-h--cccceeeechhhhhHHHHHHHHHHHcCCCceeEEeecccccccc---------c----
Confidence            45665555555 555544 2  35789999999999999988888776555677888888876421         0    


Q ss_pred             cCCCCCeeEEEecCCcc
Q 017812          139 SDMHSSIQLLINNAGIL  155 (365)
Q Consensus       139 ~~~~~~id~lv~nAG~~  155 (365)
                        ..+++|++|.|.-..
T Consensus       176 --~~~~fDlIVsNPPYI  190 (271)
T d1nv8a_         176 --KFASIEMILSNPPYV  190 (271)
T ss_dssp             --GTTTCCEEEECCCCB
T ss_pred             --ccCcccEEEEccccc
Confidence              347899999999865

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.81  E-value=0.068  Score=41.20  Aligned_cols=38  Identities=26%  Similarity=0.314  Sum_probs=34.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchh
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHL   95 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~   95 (365)
                      +.||+|+|.|= |-||+.+|+.+...|++|+++..++-+
T Consensus        22 l~Gk~v~V~Gy-G~iG~g~A~~~rg~G~~V~v~e~dp~~   59 (163)
T d1li4a1          22 IAGKVAVVAGY-GDVGKGCAQALRGFGARVIITEIDPIN   59 (163)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             ecCCEEEEecc-ccccHHHHHHHHhCCCeeEeeecccch
Confidence            78999999986 479999999999999999999999854

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.78  E-value=0.096  Score=44.57  Aligned_cols=25  Identities=28%  Similarity=0.426  Sum_probs=22.1

Q ss_pred             CChHHHHHHHHHHHCCCEEEEEecC
Q 017812           68 TSGLGAAAAYALSREGFHVVLVGRS   92 (365)
Q Consensus        68 ssGIG~~~a~~la~~G~~Vil~~r~   92 (365)
                      ||-.|.++|+.+..+|++|+++.+.
T Consensus        45 SGk~G~alA~~~~~~Ga~V~li~g~   69 (290)
T d1p9oa_          45 SGRRGATSAEAFLAAGYGVLFLYRA   69 (290)
T ss_dssp             CCHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             chHHHHHHHHHHHHcCCEEEEEecC
Confidence            4679999999999999999998654

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=93.72  E-value=0.22  Score=36.95  Aligned_cols=76  Identities=18%  Similarity=0.241  Sum_probs=53.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHC-CCEEEEE-ecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhc
Q 017812           61 VCIVTGATSGLGAAAAYALSRE-GFHVVLV-GRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  138 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~-G~~Vil~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~  138 (365)
                      .|.|.|++|-+|+++++...+. +++++.. ++.. .+..    +...  +.+   +..|+|.++.+.+.++.+.+    
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~-~~~~----~~~~--~~D---vvIDFS~p~~~~~~~~~~~~----   66 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGD-PLSL----LTDG--NTE---VVIDFTHPDVVMGNLEFLID----   66 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTC-CTHH----HHTT--TCS---EEEECCCTTTHHHHHHHHHH----
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCC-chhh----hccc--cCC---EEEEcccHHHHHHHHHHHHh----
Confidence            4789999999999999987765 4676644 4432 2221    2111  222   57899999999999998887    


Q ss_pred             cCCCCCeeEEEecCCc
Q 017812          139 SDMHSSIQLLINNAGI  154 (365)
Q Consensus       139 ~~~~~~id~lv~nAG~  154 (365)
                          .++.+++-..|.
T Consensus        67 ----~~~~~ViGTTG~   78 (135)
T d1yl7a1          67 ----NGIHAVVGTTGF   78 (135)
T ss_dssp             ----TTCEEEECCCCC
T ss_pred             ----cCCCEEEecccc
Confidence                457788877765

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=93.71  E-value=0.16  Score=37.00  Aligned_cols=35  Identities=23%  Similarity=0.358  Sum_probs=30.8

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCch
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH   94 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~   94 (365)
                      ++.++|.|| |.+|.++|..|+++|.+|.++.+.+.
T Consensus        30 ~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~   64 (121)
T d1d7ya2          30 QSRLLIVGG-GVIGLELAATARTAGVHVSLVETQPR   64 (121)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEECc-chhHHHHHHHhhcccceEEEEeeccc
Confidence            577888876 78999999999999999999999754

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=93.68  E-value=0.06  Score=41.49  Aligned_cols=67  Identities=13%  Similarity=0.207  Sum_probs=44.0

Q ss_pred             EEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCC-----CceEEEEecCCChhhHHHHH
Q 017812           62 CIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKD-----ARLEAFQVDLSSFQSVLKFK  129 (365)
Q Consensus        62 vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~-----~~~~~~~~Dls~~~~v~~~~  129 (365)
                      |-|-| .|-+|..+|++|+++|++|++.+|++++.+++.+.-.....+     .+..++-+=+.+.+.++.++
T Consensus         3 IgiIG-lG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~d~ii~~v~~~~~v~~v~   74 (161)
T d1vpda2           3 VGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVA   74 (161)
T ss_dssp             EEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHH
T ss_pred             EEEEe-hhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhhcccHHHHHhCCCeEEEEcCCHHHHHHHH
Confidence            44444 477999999999999999999999998877765421110000     12233444456667777765

>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: mRNA cap (Guanine N-7) methyltransferase
domain: mRNA cap (Guanine N-7) methyltransferase
species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]

Probab=93.58  E-value=0.21  Score=41.15  Aligned_cols=79  Identities=9%  Similarity=0.093  Sum_probs=59.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      ++++||=.|++.|   ..+..+++.|. +|+.++.+++.++.+.+.........++.++++|.....-            
T Consensus        24 ~~~~VLDlGCG~G---~~~~~~~~~~~~~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~------------   88 (252)
T d1ri5a_          24 RGDSVLDLGCGKG---GDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHM------------   88 (252)
T ss_dssp             TTCEEEEETCTTT---TTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCC------------
T ss_pred             CcCEEEEecccCc---HHHHHHHHcCCCeEEEecCCHHHHHHHHHHHHhcCCCcceEEEEcchhhhcc------------
Confidence            3788999999876   34567777775 8999999999998888777766556689999999865421            


Q ss_pred             hccCCCCCeeEEEecCCc
Q 017812          137 LDSDMHSSIQLLINNAGI  154 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~  154 (365)
                         +..+..|+++++-++
T Consensus        89 ---~~~~~fD~V~~~~~l  103 (252)
T d1ri5a_          89 ---DLGKEFDVISSQFSF  103 (252)
T ss_dssp             ---CCSSCEEEEEEESCG
T ss_pred             ---cccccceEEEEccee
Confidence               023579999887665

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.53  E-value=0.12  Score=37.74  Aligned_cols=33  Identities=21%  Similarity=0.211  Sum_probs=29.5

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEecCc
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS   93 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~   93 (365)
                      |.++|-|| |-||.++|..|++.|.+|.++.|++
T Consensus        24 ~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~   56 (122)
T d1v59a2          24 KRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQP   56 (122)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CeEEEECC-CchHHHHHHHHHhhCcceeEEEecc
Confidence            67888887 6799999999999999999999864

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.49  E-value=0.14  Score=37.55  Aligned_cols=33  Identities=24%  Similarity=0.196  Sum_probs=29.7

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEecCc
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS   93 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~   93 (365)
                      |.++|.||+ -||.++|..|++.|.+|.++.|+.
T Consensus        23 k~vvIvGgG-~iG~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          23 GRSVIVGAG-YIAVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             SEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CEEEEEcCC-ccHHHHHHHHhcCCcEEEEEeecc
Confidence            678888874 699999999999999999999964

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=93.45  E-value=0.04  Score=43.26  Aligned_cols=37  Identities=24%  Similarity=0.330  Sum_probs=32.9

Q ss_pred             CCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHH
Q 017812           67 ATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADI  103 (365)
Q Consensus        67 assGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l  103 (365)
                      |.|-+|.++|++|+++|++|++.+|++++.+++.++-
T Consensus         8 GlG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~   44 (178)
T d1pgja2           8 GLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKAN   44 (178)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHT
T ss_pred             eehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcC
Confidence            5688999999999999999999999999887776663

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=93.35  E-value=0.21  Score=40.30  Aligned_cols=76  Identities=14%  Similarity=0.082  Sum_probs=58.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhc
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  138 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~  138 (365)
                      ++.||=.||+.|+-   +..|+++|++|+.++-+++.++.+.+.+.... ..++.++..|..+..-              
T Consensus        16 ~~rVLDiGcG~G~~---~~~l~~~~~~v~gvD~s~~~i~~A~~~~~~~~-~~~i~~~~~d~~~l~~--------------   77 (231)
T d1vl5a_          16 NEEVLDVATGGGHV---ANAFAPFVKKVVAFDLTEDILKVARAFIEGNG-HQQVEYVQGDAEQMPF--------------   77 (231)
T ss_dssp             CCEEEEETCTTCHH---HHHHGGGSSEEEEEESCHHHHHHHHHHHHHTT-CCSEEEEECCC-CCCS--------------
T ss_pred             cCEEEEecccCcHH---HHHHHHhCCEEEEEECCHHHHhhhhhcccccc-cccccccccccccccc--------------
Confidence            67899999988854   46788899999999999988887766665543 4578899999887531              


Q ss_pred             cCCCCCeeEEEecCCc
Q 017812          139 SDMHSSIQLLINNAGI  154 (365)
Q Consensus       139 ~~~~~~id~lv~nAG~  154 (365)
                        ..+..|+++++..+
T Consensus        78 --~~~~fD~v~~~~~l   91 (231)
T d1vl5a_          78 --TDERFHIVTCRIAA   91 (231)
T ss_dssp             --CTTCEEEEEEESCG
T ss_pred             --cccccccccccccc
Confidence              23679999988765

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.30  E-value=0.084  Score=41.11  Aligned_cols=39  Identities=23%  Similarity=0.244  Sum_probs=35.6

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecC
Q 017812           54 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRS   92 (365)
Q Consensus        54 ~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~   92 (365)
                      ..+++||.|+|.|-|.=+|+-+|..|+++|++|..+..+
T Consensus        24 g~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~   62 (171)
T d1edza1          24 GNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN   62 (171)
T ss_dssp             TCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred             cCCCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccc
Confidence            346899999999999999999999999999999988765

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=93.29  E-value=0.069  Score=39.14  Aligned_cols=35  Identities=23%  Similarity=0.319  Sum_probs=30.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCc
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS   93 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~   93 (365)
                      ++|.++|.|| |.+|.++|..|++.|.+|.++.+..
T Consensus        29 ~~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~   63 (123)
T d1nhpa2          29 EVNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILD   63 (123)
T ss_dssp             TCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCCEEEEECC-hHHHHHHHHHhhccceEEEEEEecC
Confidence            4677888765 7899999999999999999998864

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=93.19  E-value=0.15  Score=36.90  Aligned_cols=34  Identities=12%  Similarity=0.191  Sum_probs=29.8

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCc
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS   93 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~   93 (365)
                      .|.++|.|| |-||.++|..|++.|.+|.++.|..
T Consensus        22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhccccceeeehhc
Confidence            367888887 6799999999999999999999864

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=93.10  E-value=0.085  Score=42.05  Aligned_cols=41  Identities=20%  Similarity=0.217  Sum_probs=35.7

Q ss_pred             CCCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCch
Q 017812           53 PITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH   94 (365)
Q Consensus        53 ~~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~   94 (365)
                      ....+.||++.|.|. |.||+++|+.+...|++|+..++...
T Consensus        43 ~~~eL~gktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   83 (193)
T d1mx3a1          43 GAARIRGETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYLS   83 (193)
T ss_dssp             TCCCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSC
T ss_pred             CceeeeCceEEEecc-ccccccceeeeeccccceeeccCccc
Confidence            345689999999986 66999999999999999999998754

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=93.08  E-value=0.038  Score=44.06  Aligned_cols=41  Identities=20%  Similarity=0.186  Sum_probs=34.2

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHH
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMA  101 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~  101 (365)
                      +.+.|-||+. .|.++|..|++.|.+|.+++|+++..+++.+
T Consensus         8 ~KI~ViGaG~-wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~   48 (189)
T d1n1ea2           8 NKAVVFGSGA-FGTALAMVLSKKCREVCVWHMNEEEVRLVNE   48 (189)
T ss_dssp             EEEEEECCSH-HHHHHHHHHHTTEEEEEEECSCHHHHHHHHH
T ss_pred             ceEEEECCCH-HHHHHHHHHHHcCCeEEEEEecHHHHHHHhh
Confidence            4688888855 9999999999999999999999876655443

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=92.97  E-value=0.41  Score=37.69  Aligned_cols=77  Identities=12%  Similarity=0.200  Sum_probs=57.0

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      +.+..||=-|++.|.   .+..|+++|++|+.++.+++.++.+.+.....+ -..+.+...|+.+..             
T Consensus        29 ~~~grvLDiGcG~G~---~~~~la~~g~~v~gvD~s~~~l~~a~~~~~~~~-~~~~~~~~~d~~~~~-------------   91 (198)
T d2i6ga1          29 VAPGRTLDLGCGNGR---NSLYLAANGYDVTAWDKNPASMANLERIKAAEG-LDNLQTDLVDLNTLT-------------   91 (198)
T ss_dssp             SCSCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-CTTEEEEECCTTTCC-------------
T ss_pred             CCCCcEEEECCCCCH---HHHHHHHHhhhhccccCcHHHHHHHHHHhhhcc-ccchhhhheeccccc-------------
Confidence            345679999996554   567889999999999999998888777666543 235778888887654             


Q ss_pred             hccCCCCCeeEEEecCCc
Q 017812          137 LDSDMHSSIQLLINNAGI  154 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~  154 (365)
                          ..+..|+++.+.-+
T Consensus        92 ----~~~~fD~I~~~~~~  105 (198)
T d2i6ga1          92 ----FDGEYDFILSTVVM  105 (198)
T ss_dssp             ----CCCCEEEEEEESCG
T ss_pred             ----ccccccEEEEeeee
Confidence                12468999976644

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=92.97  E-value=0.09  Score=41.68  Aligned_cols=41  Identities=15%  Similarity=0.075  Sum_probs=35.3

Q ss_pred             CCCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCch
Q 017812           53 PITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH   94 (365)
Q Consensus        53 ~~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~   94 (365)
                      ...+++++++.|.|. |.||+++|+.|...|.+|+..+|...
T Consensus        38 ~~~~l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   78 (188)
T d2naca1          38 HAYDLEAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHRL   78 (188)
T ss_dssp             TCCCCTTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSCC
T ss_pred             cceeccccceeeccc-cccchhhhhhhhccCceEEEEeeccc
Confidence            345688999999996 66999999999999999999998653

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=92.89  E-value=0.2  Score=36.09  Aligned_cols=33  Identities=18%  Similarity=0.128  Sum_probs=28.8

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEecCc
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS   93 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~   93 (365)
                      |.++|.|| |-+|.++|..|++.|.+|.++.|.+
T Consensus        22 ~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~   54 (116)
T d1gesa2          22 ERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFD   54 (116)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CEEEEECC-ChhhHHHHHHhhccccEEEEEeecc
Confidence            56777776 7799999999999999999999964

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=92.84  E-value=0.21  Score=36.15  Aligned_cols=34  Identities=21%  Similarity=0.160  Sum_probs=30.0

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCc
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS   93 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~   93 (365)
                      .+.++|.|| |-||.++|..|++.|.+|.++.|+.
T Consensus        22 p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~   55 (119)
T d3lada2          22 PGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMD   55 (119)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeec
Confidence            467888887 6799999999999999999998864

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.78  E-value=0.26  Score=39.99  Aligned_cols=82  Identities=11%  Similarity=0.084  Sum_probs=63.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcC----CCceEEEEecCCChhhHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNK----DARLEAFQVDLSSFQSVLKFKDSLQ  133 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~----~~~~~~~~~Dls~~~~v~~~~~~~~  133 (365)
                      .|..||-.|+.+|--.++.-++.....+|+.++++++-++.+.+.+.....    -..+.+...|..+...         
T Consensus        76 ~g~~VLdiG~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~~~~~---------  146 (224)
T d1i1na_          76 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYA---------  146 (224)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCG---------
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeecccccc---------
Confidence            478999999999988888888888888999999999998888888765432    2456777778654221         


Q ss_pred             HHHhccCCCCCeeEEEecCCcc
Q 017812          134 QWLLDSDMHSSIQLLINNAGIL  155 (365)
Q Consensus       134 ~~~~~~~~~~~id~lv~nAG~~  155 (365)
                             ..++.|.++.+++..
T Consensus       147 -------~~~~fD~I~~~~~~~  161 (224)
T d1i1na_         147 -------EEAPYDAIHVGAAAP  161 (224)
T ss_dssp             -------GGCCEEEEEECSBBS
T ss_pred             -------hhhhhhhhhhhcchh
Confidence                   236799999998863

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=92.76  E-value=0.1  Score=40.28  Aligned_cols=41  Identities=20%  Similarity=0.329  Sum_probs=33.8

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCC--EEEEEecCchhHHHHHH
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGF--HVVLVGRSSHLLSETMA  101 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~--~Vil~~r~~~~~~~~~~  101 (365)
                      |.++|.|+ |-||..+|+.|.+.|.  +|+..+|+++.++.+.+
T Consensus         2 k~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~   44 (171)
T d2g5ca2           2 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVD   44 (171)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHH
T ss_pred             CEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHH
Confidence            45888875 8999999999999995  78999999877665543

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=92.59  E-value=0.28  Score=38.77  Aligned_cols=41  Identities=10%  Similarity=0.009  Sum_probs=35.4

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchh
Q 017812           54 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHL   95 (365)
Q Consensus        54 ~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~   95 (365)
                      ..+++|+++.|.|. |.||+++|+.+...|++|+..++....
T Consensus        42 ~~~l~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~   82 (191)
T d1gdha1          42 GEKLDNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRAS   82 (191)
T ss_dssp             BCCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCC
T ss_pred             cceecccceEEeec-ccchHHHHHHHHhhccccccccccccc
Confidence            45688999999987 569999999999999999999886543

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=92.59  E-value=0.078  Score=44.98  Aligned_cols=35  Identities=29%  Similarity=0.357  Sum_probs=31.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEec
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGR   91 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r   91 (365)
                      +++|++|+|-|- |-+|..+|+.|.+.|++|+.++-
T Consensus        33 ~L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vsD   67 (293)
T d1hwxa1          33 GFGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVGE   67 (293)
T ss_dssp             SSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEEc
Confidence            588999999997 67999999999999999998763

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=92.48  E-value=0.53  Score=36.93  Aligned_cols=77  Identities=17%  Similarity=0.145  Sum_probs=57.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcC-CCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNK-DARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      .+++||=.|+++|   .++..+++.+.+|++++.++...+.+.+.+...+- +.++.++..|+.+.-             
T Consensus        52 ~~~~VLDiGcG~G---~~~~~la~~~~~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d~~~~~-------------  115 (194)
T d1dusa_          52 KDDDILDLGCGYG---VIGIALADEVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENV-------------  115 (194)
T ss_dssp             TTCEEEEETCTTS---HHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTC-------------
T ss_pred             CCCeEEEEeecCC---hhHHHHHhhccccceeeeccccchhHHHHHHHhCCccceEEEEEcchhhhh-------------
Confidence            5788998888776   34556777888999999999888888777765432 346888999986521             


Q ss_pred             hccCCCCCeeEEEecCCc
Q 017812          137 LDSDMHSSIQLLINNAGI  154 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~  154 (365)
                          .....|+++.|...
T Consensus       116 ----~~~~fD~Ii~~~p~  129 (194)
T d1dusa_         116 ----KDRKYNKIITNPPI  129 (194)
T ss_dssp             ----TTSCEEEEEECCCS
T ss_pred             ----ccCCceEEEEcccE
Confidence                12579999988653

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=92.28  E-value=0.41  Score=40.02  Aligned_cols=78  Identities=12%  Similarity=0.054  Sum_probs=58.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHC-CCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSRE-GFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~-G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      .|.+||=.||+.|.   ++..|+++ |++|+.++-++..++.+.+.....+-..++.++.+|..+..-            
T Consensus        67 ~~~~vLDiGcG~G~---~~~~la~~~~~~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~~~l~~------------  131 (282)
T d2o57a1          67 RQAKGLDLGAGYGG---AARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPC------------  131 (282)
T ss_dssp             TTCEEEEETCTTSH---HHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSS------------
T ss_pred             CCCEEEEeCCCCcH---HHhhhhccCCcEEEEEeccchhhhhhhcccccccccccccccccccccccc------------
Confidence            47899999997662   45556554 899999999998888887777776556689999999877531            


Q ss_pred             hccCCCCCeeEEEecCCc
Q 017812          137 LDSDMHSSIQLLINNAGI  154 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~  154 (365)
                          ..+.+|+++.+..+
T Consensus       132 ----~~~sfD~V~~~~~l  145 (282)
T d2o57a1         132 ----EDNSYDFIWSQDAF  145 (282)
T ss_dssp             ----CTTCEEEEEEESCG
T ss_pred             ----cccccchhhccchh
Confidence                23679999876554

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=92.24  E-value=0.12  Score=39.25  Aligned_cols=40  Identities=18%  Similarity=0.335  Sum_probs=33.2

Q ss_pred             EEEecCCChHHHHHHHHHHHCC-CEEEEEecCchhHHHHHHH
Q 017812           62 CIVTGATSGLGAAAAYALSREG-FHVVLVGRSSHLLSETMAD  102 (365)
Q Consensus        62 vlITGassGIG~~~a~~la~~G-~~Vil~~r~~~~~~~~~~~  102 (365)
                      +.+-|+ |-+|.++++.|.+.| .+|++.+|++++.+++.++
T Consensus         3 I~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~   43 (152)
T d1yqga2           3 VYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKE   43 (152)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHH
T ss_pred             EEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhh
Confidence            455666 889999999999888 7999999999887766554

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=92.14  E-value=0.32  Score=39.50  Aligned_cols=75  Identities=11%  Similarity=-0.044  Sum_probs=55.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .|..||-.|+++|--   +..|++.+.+|+.+.++++..+.+.+.+..   ..++.++..|..+--.             
T Consensus        70 ~g~~VLdIG~GsGy~---ta~La~l~~~V~aiE~~~~~~~~A~~~~~~---~~nv~~~~~d~~~g~~-------------  130 (224)
T d1vbfa_          70 KGQKVLEIGTGIGYY---TALIAEIVDKVVSVEINEKMYNYASKLLSY---YNNIKLILGDGTLGYE-------------  130 (224)
T ss_dssp             TTCEEEEECCTTSHH---HHHHHHHSSEEEEEESCHHHHHHHHHHHTT---CSSEEEEESCGGGCCG-------------
T ss_pred             ccceEEEecCCCCHH---HHHHHHHhcccccccccHHHHHHHHHHHhc---ccccccccCchhhcch-------------
Confidence            477899999998854   445677778999999998887776655433   3578888888764110             


Q ss_pred             ccCCCCCeeEEEecCCc
Q 017812          138 DSDMHSSIQLLINNAGI  154 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~  154 (365)
                         ..++.|.++.++++
T Consensus       131 ---~~~pfD~Iiv~~a~  144 (224)
T d1vbfa_         131 ---EEKPYDRVVVWATA  144 (224)
T ss_dssp             ---GGCCEEEEEESSBB
T ss_pred             ---hhhhHHHHHhhcch
Confidence               23679999998876

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=92.09  E-value=0.23  Score=38.38  Aligned_cols=122  Identities=7%  Similarity=0.066  Sum_probs=63.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHC-----CCEEEEEecCchhHHHHHHHHHhhcC--CCceEEEEecCCChhhHHHHHHHHH
Q 017812           61 VCIVTGATSGLGAAAAYALSRE-----GFHVVLVGRSSHLLSETMADITSRNK--DARLEAFQVDLSSFQSVLKFKDSLQ  133 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~-----G~~Vil~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dls~~~~v~~~~~~~~  133 (365)
                      .+.|.||+|.-...+...+..+     +.+|++.+.++++++.....+.....  +........  +|..   +.+    
T Consensus         5 KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~--~d~~---eal----   75 (167)
T d1u8xx1           5 SIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAAT--TDPE---EAF----   75 (167)
T ss_dssp             EEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEE--SCHH---HHH----
T ss_pred             eEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEec--CChh---hcc----
Confidence            4666677553222233333332     24899999999998755555433210  122222221  1221   111    


Q ss_pred             HHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHh----------------HHHHHHHHHHhHhhhcCCCCCeE
Q 017812          134 QWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNY----------------IGAFFLTKLLLPLLKNSPVPSRI  197 (365)
Q Consensus       134 ~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~----------------~~~~~l~~~~l~~~~~~~~~g~i  197 (365)
                               ..-|++|+.||+....    ...-++.+..|+                +-+.-..+.+.+.+.+....+-+
T Consensus        76 ---------~~AD~Vvitag~~~~~----g~~rd~~i~~~~Gi~~~~t~g~gg~~~~~r~i~ii~~i~~~i~~~~P~A~l  142 (167)
T d1u8xx1          76 ---------TDVDFVMAHIRVGKYA----MRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWM  142 (167)
T ss_dssp             ---------SSCSEEEECCCTTHHH----HHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred             ---------CCCCEEEECCCcCCCC----ceeHHHhhchhcCceeeccccCcchheehhhHHHHHHHHHHHHhhCCCeEE
Confidence                     3589999999985321    111122333331                22345566777777766556778


Q ss_pred             EEEcCCc
Q 017812          198 VNVTSFT  204 (365)
Q Consensus       198 V~vsS~~  204 (365)
                      +++|-..
T Consensus       143 i~~TNPv  149 (167)
T d1u8xx1         143 LNYSNPA  149 (167)
T ss_dssp             EECCSCH
T ss_pred             EEeCCHH
Confidence            7777544

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=92.06  E-value=0.19  Score=36.51  Aligned_cols=32  Identities=31%  Similarity=0.294  Sum_probs=28.1

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEecC
Q 017812           60 PVCIVTGATSGLGAAAAYALSREGFHVVLVGRS   92 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G~~Vil~~r~   92 (365)
                      +.++|.|| |-||.++|..|++.|.+|.++.|+
T Consensus        21 ~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          21 GKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence            45777776 679999999999999999999886

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=92.03  E-value=0.3  Score=37.79  Aligned_cols=78  Identities=17%  Similarity=0.234  Sum_probs=49.6

Q ss_pred             CCCEEEEecCC-ChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           58 KRPVCIVTGAT-SGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        58 ~~k~vlITGas-sGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      +|+.||=.|+. |++|    .+.+.+|++|+.++.+++..+.+.+.++..+-+.++....+|.        +......  
T Consensus        41 ~g~~vLDl~~G~G~~~----i~a~~~ga~vv~vD~~~~a~~~~~~N~~~~~~~~~v~~~~~d~--------~~~~~~~--  106 (171)
T d1ws6a1          41 RRGRFLDPFAGSGAVG----LEAASEGWEAVLVEKDPEAVRLLKENVRRTGLGARVVALPVEV--------FLPEAKA--  106 (171)
T ss_dssp             TCCEEEEETCSSCHHH----HHHHHTTCEEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHH--------HHHHHHH--
T ss_pred             CCCeEEEeccccchhh----hhhhhccchhhhcccCHHHHhhhhHHHHhhccccceeeeehhc--------ccccccc--
Confidence            46677755655 4444    4566789999999999999988888887764333333222221        1222222  


Q ss_pred             hccCCCCCeeEEEecCC
Q 017812          137 LDSDMHSSIQLLINNAG  153 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG  153 (365)
                          ...+.|+++.+.-
T Consensus       107 ----~~~~fD~If~DPP  119 (171)
T d1ws6a1         107 ----QGERFTVAFMAPP  119 (171)
T ss_dssp             ----TTCCEEEEEECCC
T ss_pred             ----cCCccceeEEccc
Confidence                3467999998753

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=91.95  E-value=0.24  Score=38.67  Aligned_cols=45  Identities=16%  Similarity=0.079  Sum_probs=36.9

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMAD  102 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~  102 (365)
                      +..-.|+|-|| |-.|++.++-....|++|.+.+.+.++++++.+.
T Consensus        27 V~pa~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l   71 (183)
T d1l7da1          27 VPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVESL   71 (183)
T ss_dssp             ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHT
T ss_pred             cCCcEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHh
Confidence            34457888887 5589999999999999999999999988776543

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=91.93  E-value=0.26  Score=35.20  Aligned_cols=63  Identities=14%  Similarity=0.204  Sum_probs=48.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDS  131 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~  131 (365)
                      .+.++.|-|| |-+|+-+|....+.|+++++.+.+++.-..          ...-.++..|..|.+.+.++...
T Consensus        10 ~~~kigIlGg-GQL~rMla~aA~~lG~~v~v~d~~~~~PA~----------~va~~~i~~~~~d~~~l~~~~~~   72 (111)
T d1kjqa2          10 AATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAPAM----------HVAHRSHVINMLDGDALRRVVEL   72 (111)
T ss_dssp             TCCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCGGG----------GGSSEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEEeC-CHHHHHHHHHHHHCCCEEEEEcCCCCCchh----------hcCCeEEECCCCCHHHHHHHHHh
Confidence            3567999995 569999999999999999999988652100          11226788999999988887764

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=91.93  E-value=0.11  Score=37.94  Aligned_cols=34  Identities=29%  Similarity=0.467  Sum_probs=29.7

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCc
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS   93 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~   93 (365)
                      ++.++|.|| |.+|.++|..|++.|.+|.++.|++
T Consensus        32 ~~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   65 (122)
T d1xhca2          32 SGEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGA   65 (122)
T ss_dssp             HSEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEECC-cHHHHHHHHHhhcccceEEEEeccc
Confidence            467888776 7799999999999999999999864

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=91.92  E-value=0.18  Score=39.81  Aligned_cols=40  Identities=10%  Similarity=0.048  Sum_probs=34.4

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCch
Q 017812           54 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH   94 (365)
Q Consensus        54 ~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~   94 (365)
                      ..++.++++.|-|. |.||+++|+.+...|++|+..++...
T Consensus        39 ~~~l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   78 (188)
T d1sc6a1          39 SFEARGKKLGIIGY-GHIGTQLGILAESLGMYVYFYDIENK   78 (188)
T ss_dssp             CCCSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             cccccceEEEEeec-ccchhhhhhhcccccceEeecccccc
Confidence            34688999999965 77999999999999999999998653

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=91.88  E-value=0.21  Score=36.32  Aligned_cols=34  Identities=26%  Similarity=0.262  Sum_probs=30.2

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCc
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS   93 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~   93 (365)
                      .+.++|.|| |-||.++|..|++.|.+|.++.|++
T Consensus        25 p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~   58 (123)
T d1dxla2          25 PKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFAS   58 (123)
T ss_dssp             CSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEcc
Confidence            467888887 6799999999999999999999865

>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: CheY protein
species: Thermotoga maritima [TaxId: 2336]

Probab=91.87  E-value=0.99  Score=32.17  Aligned_cols=82  Identities=5%  Similarity=0.197  Sum_probs=56.9

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhc
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  138 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~  138 (365)
                      ||+|||.=-+.-+-..+...|.+.|++|+..+.+.+   ++.+.+.+.  ..++.++-.++-+.+.+ ++++++++    
T Consensus         1 GkrILivDD~~~~~~~l~~~L~~~g~~v~~~a~~~~---~al~~~~~~--~~dliilD~~mp~~~G~-e~~~~ir~----   70 (118)
T d1u0sy_           1 GKRVLIVDDAAFMRMMLKDIITKAGYEVAGEATNGR---EAVEKYKEL--KPDIVTMDITMPEMNGI-DAIKEIMK----   70 (118)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEEESSHH---HHHHHHHHH--CCSEEEEECSCGGGCHH-HHHHHHHH----
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCHH---HHHHHHHhc--cCCEEEEecCCCCCCHH-HHHHHHHH----
Confidence            688999999999999999999999999987766654   334444444  34566666666666554 66677766    


Q ss_pred             cCCCCCeeEEEecC
Q 017812          139 SDMHSSIQLLINNA  152 (365)
Q Consensus       139 ~~~~~~id~lv~nA  152 (365)
                        ....+-+++..+
T Consensus        71 --~~~~~pvi~ls~   82 (118)
T d1u0sy_          71 --IDPNAKIIVCSA   82 (118)
T ss_dssp             --HCTTCCEEEEEC
T ss_pred             --hCCCCcEEEEEc
Confidence              334566666554

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=91.86  E-value=0.13  Score=39.18  Aligned_cols=36  Identities=17%  Similarity=0.180  Sum_probs=29.4

Q ss_pred             CCEEEE-ecCCChHHHHHHHHHHHCCCEEEEEecCch
Q 017812           59 RPVCIV-TGATSGLGAAAAYALSREGFHVVLVGRSSH   94 (365)
Q Consensus        59 ~k~vlI-TGassGIG~~~a~~la~~G~~Vil~~r~~~   94 (365)
                      ++.++| -.+++.||.++|..|+++|++|.++.+...
T Consensus        39 ~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~   75 (156)
T d1djqa2          39 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHL   75 (156)
T ss_dssp             CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred             CCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Confidence            444444 456689999999999999999999999753

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=91.85  E-value=0.082  Score=40.74  Aligned_cols=39  Identities=13%  Similarity=0.167  Sum_probs=31.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHH
Q 017812           61 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETM  100 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~  100 (365)
                      .|-+- |.|-+|.++|++|+++|++|.+.+|+.++.+.+.
T Consensus         3 kIg~I-GlG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~   41 (162)
T d3cuma2           3 QIAFI-GLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLV   41 (162)
T ss_dssp             EEEEE-CCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHH
T ss_pred             EEEEE-EEHHHHHHHHHHHHHCCCeEEEEECchhhhhhhh
Confidence            35555 4577999999999999999999999988765543

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=91.85  E-value=0.27  Score=35.21  Aligned_cols=34  Identities=21%  Similarity=0.257  Sum_probs=28.9

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCc
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS   93 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~   93 (365)
                      .+.++|.|| |-+|.++|..|++.|.+|.++.|.+
T Consensus        21 p~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~   54 (115)
T d1lvla2          21 PQHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARE   54 (115)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHHhhcccceEEEeeec
Confidence            356777765 7899999999999999999998864

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=91.81  E-value=0.16  Score=36.66  Aligned_cols=36  Identities=17%  Similarity=0.229  Sum_probs=31.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCch
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH   94 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~   94 (365)
                      .+|.++|.|| |-||.++|..|++.|.+|.++.|.+.
T Consensus        21 ~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~~   56 (121)
T d1mo9a2          21 PGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTEP   56 (121)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccch
Confidence            4688888887 67999999999999999999998653

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=91.75  E-value=0.09  Score=40.89  Aligned_cols=119  Identities=12%  Similarity=-0.018  Sum_probs=62.9

Q ss_pred             EEEecC-CChHHHHHHHHHHHCC----CEEEEEecCchh--HHHHHHHHHhhc--CCCceEEEEecCCChhhHHHHHHHH
Q 017812           62 CIVTGA-TSGLGAAAAYALSREG----FHVVLVGRSSHL--LSETMADITSRN--KDARLEAFQVDLSSFQSVLKFKDSL  132 (365)
Q Consensus        62 vlITGa-ssGIG~~~a~~la~~G----~~Vil~~r~~~~--~~~~~~~l~~~~--~~~~~~~~~~Dls~~~~v~~~~~~~  132 (365)
                      +.|.|| |.|.+..++..+....    .+|++.+.++++  ++..........  .+.++.  ....+|..+   .   +
T Consensus         4 I~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~--~~~~td~~~---a---l   75 (169)
T d1s6ya1           4 IATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIE--IHLTLDRRR---A---L   75 (169)
T ss_dssp             EEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCE--EEEESCHHH---H---H
T ss_pred             EEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCce--eeecCCchh---h---c
Confidence            556665 6677777776666542    389999998854  333222111111  012222  222344321   1   1


Q ss_pred             HHHHhccCCCCCeeEEEecCCcccCCCC-----------------CCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCC
Q 017812          133 QQWLLDSDMHSSIQLLINNAGILATSSR-----------------LTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPS  195 (365)
Q Consensus       133 ~~~~~~~~~~~~id~lv~nAG~~~~~~~-----------------~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g  195 (365)
                                ..-|++|+.||+......                 ..+..+     ....-...+.+.+.+.+.+....+
T Consensus        76 ----------~gaDvVv~ta~~~~~~~~~r~~~i~~~~gi~~~~t~g~~~~-----~~~~~n~~i~~~i~~~i~~~~pda  140 (169)
T d1s6ya1          76 ----------DGADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGL-----FKGLRTIPVILDIIRDMEELCPDA  140 (169)
T ss_dssp             ----------TTCSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHH-----HHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred             ----------CCCCEEEEccccCCCCCeehhhhhhhhcCceeccccCcchh-----hhccccHHHHHHHHHHHhhcCCCe
Confidence                      247999999998532100                 011111     112345566777778777766567


Q ss_pred             eEEEEcCC
Q 017812          196 RIVNVTSF  203 (365)
Q Consensus       196 ~iV~vsS~  203 (365)
                      -++++|-.
T Consensus       141 ~~i~vtNP  148 (169)
T d1s6ya1         141 WLINFTNP  148 (169)
T ss_dssp             EEEECSSS
T ss_pred             EEEEeCCh
Confidence            77777754

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=91.47  E-value=0.21  Score=39.10  Aligned_cols=39  Identities=26%  Similarity=0.313  Sum_probs=33.7

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCch
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH   94 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~   94 (365)
                      ..-++|.|+|.|| |--|.+.|..|+++|++|++..++..
T Consensus        39 ~~~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~~   77 (179)
T d1ps9a3          39 PAVQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHSE   77 (179)
T ss_dssp             SCSSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCCCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccCc
Confidence            3456889999997 56899999999999999999999764

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=91.47  E-value=0.63  Score=38.33  Aligned_cols=77  Identities=17%  Similarity=0.227  Sum_probs=58.6

Q ss_pred             CCCEEEEecCCCh-HHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           58 KRPVCIVTGATSG-LGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        58 ~~k~vlITGassG-IG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      .|.+||=.|+++| +..++|+.+. .+.+|+.++++++.++.+.+.+.+.....++.+...|+.+.-             
T Consensus        85 pG~rVLEiG~GsG~lt~~la~~v~-~~g~V~~vD~~e~~~~~A~~n~~~~~~~~nv~~~~~Di~~~~-------------  150 (250)
T d1yb2a1          85 PGMDILEVGVGSGNMSSYILYALN-GKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFI-------------  150 (250)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHT-TSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCC-------------
T ss_pred             CcCEEEEeeeeCcHHHHHHHHHhC-CCcEEEEEECCHHHHHHHHHHHHHhcCCCceEEEEeeeeccc-------------
Confidence            3789999999866 4555555543 345999999999999999999887665678999999987631             


Q ss_pred             hccCCCCCeeEEEecC
Q 017812          137 LDSDMHSSIQLLINNA  152 (365)
Q Consensus       137 ~~~~~~~~id~lv~nA  152 (365)
                          ....+|.++.+.
T Consensus       151 ----~~~~fD~V~ld~  162 (250)
T d1yb2a1         151 ----SDQMYDAVIADI  162 (250)
T ss_dssp             ----CSCCEEEEEECC
T ss_pred             ----ccceeeeeeecC
Confidence                225699998764

>d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methylase EF2452
species: Enterococcus faecalis [TaxId: 1351]

Probab=91.27  E-value=1.1  Score=34.67  Aligned_cols=81  Identities=10%  Similarity=0.172  Sum_probs=58.3

Q ss_pred             CCCCEEEEec-CCChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           57 IKRPVCIVTG-ATSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        57 ~~~k~vlITG-assGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      ++|+.+|=-. |||++|.+    .+.+|+ +|++++.+.+..+.+.+.+...+...++.++..|+.+      +++....
T Consensus        40 ~~~~~vLDlfaGsG~~g~e----a~srGa~~v~~ve~~~~a~~~~~~N~~~~~~~~~~~i~~~D~~~------~l~~~~~  109 (182)
T d2fhpa1          40 FDGGMALDLYSGSGGLAIE----AVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANR------ALEQFYE  109 (182)
T ss_dssp             CSSCEEEETTCTTCHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHH------HHHHHHH
T ss_pred             cCCCEEEEcccccccccce----eeecchhHHHHHHHHHHHHHHHHHHhhhhhcccccccccccchh------hhhhhcc
Confidence            5688888444 45667775    556888 7999999999998888888776555678888888753      3333333


Q ss_pred             HHhccCCCCCeeEEEecCC
Q 017812          135 WLLDSDMHSSIQLLINNAG  153 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG  153 (365)
                            ...+.|+++...-
T Consensus       110 ------~~~~fDlIflDPP  122 (182)
T d2fhpa1         110 ------EKLQFDLVLLDPP  122 (182)
T ss_dssp             ------TTCCEEEEEECCC
T ss_pred             ------cCCCcceEEechh
Confidence                  3467999987664

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=90.92  E-value=0.088  Score=42.16  Aligned_cols=39  Identities=15%  Similarity=0.148  Sum_probs=34.6

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCch
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH   94 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~   94 (365)
                      .++.||++.|.|. |.||+++|+.|..-|++|+..++...
T Consensus        41 ~~l~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   79 (199)
T d1dxya1          41 KELGQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYPM   79 (199)
T ss_dssp             CCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             ccccceeeeeeec-ccccccccccccccceeeeccCCccc
Confidence            4688999999997 55999999999999999999998654

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=90.81  E-value=0.14  Score=40.92  Aligned_cols=37  Identities=27%  Similarity=0.203  Sum_probs=30.6

Q ss_pred             EEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHH
Q 017812           62 CIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSET   99 (365)
Q Consensus        62 vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~   99 (365)
                      +.|- |.|-+|..+|..||++|++|+..+.|+++.+.+
T Consensus         3 I~Vi-GlG~vGl~~a~~la~~g~~V~g~D~n~~~i~~l   39 (202)
T d1mv8a2           3 ISIF-GLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLI   39 (202)
T ss_dssp             EEEE-CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             EEEE-CCCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHh
Confidence            4444 668899999999999999999999998765543

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=90.62  E-value=0.13  Score=39.02  Aligned_cols=37  Identities=14%  Similarity=0.209  Sum_probs=32.2

Q ss_pred             CCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHH
Q 017812           67 ATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADI  103 (365)
Q Consensus        67 assGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l  103 (365)
                      |.|-+|.++++.|.+.|++|++.+|+.++.+++.++.
T Consensus         7 G~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~   43 (152)
T d2ahra2           7 GVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL   43 (152)
T ss_dssp             CCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH
T ss_pred             eccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhcccc
Confidence            5677999999999999999999999998887766554

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.54  E-value=0.093  Score=48.71  Aligned_cols=60  Identities=12%  Similarity=0.132  Sum_probs=46.3

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecC-------------------chhHHHHHHHHHhhcCCCceEEEE
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRS-------------------SHLLSETMADITSRNKDARLEAFQ  116 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~  116 (365)
                      +++..|+|.|+ ||+|.++++.|+..|. ++++++.+                   ..+++.+.+.+.+.+|..++..+.
T Consensus        23 L~~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d~v~~sdL~rqf~~~~~diGk~ka~~~~~~L~~lNp~v~i~~~~  101 (529)
T d1yova1          23 LESAHVCLINA-TATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFVE  101 (529)
T ss_dssp             HHHCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECCSBCCHHHHHHCTTCCGGGTTSBHHHHHHHHHHTTCTTSBCCEES
T ss_pred             HhCCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCCcCChhhcCchhcCChhhCCCHHHHHHHHHHHHhCCCCcEEEEc
Confidence            45678999997 7899999999999997 88888663                   236777777788887766665554


Q ss_pred             e
Q 017812          117 V  117 (365)
Q Consensus       117 ~  117 (365)
                      .
T Consensus       102 ~  102 (529)
T d1yova1         102 E  102 (529)
T ss_dssp             S
T ss_pred             C
Confidence            3

>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical Protein YjhP
domain: Hypothetical Protein YjhP
species: Escherichia coli [TaxId: 562]

Probab=90.49  E-value=0.73  Score=37.44  Aligned_cols=76  Identities=12%  Similarity=0.114  Sum_probs=57.7

Q ss_pred             CCEEEEecCCChHHHHHHHHHHH-CCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           59 RPVCIVTGATSGLGAAAAYALSR-EGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~-~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      |+.||=.|++.|   .++..+++ .|++|+.++-++..++.+.+.....+.+.++.++..|..+..              
T Consensus        34 g~~VLDiGCG~G---~~~~~la~~~~~~v~GvD~s~~~~~~ar~~~~~~gl~~~v~~~~~d~~~~~--------------   96 (245)
T d1nkva_          34 GTRILDLGSGSG---EMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYV--------------   96 (245)
T ss_dssp             TCEEEEETCTTC---HHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCC--------------
T ss_pred             CCEEEEEcCCCC---HHHHHHHHhcCCEEEEEecccchhhHHHHHHHHhhccccchhhhhHHhhcc--------------
Confidence            788999998777   34555665 489999999999888887777766655667999999988642              


Q ss_pred             ccCCCCCeeEEEecCCc
Q 017812          138 DSDMHSSIQLLINNAGI  154 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~  154 (365)
                         ..++.|.+++.-.+
T Consensus        97 ---~~~~fD~v~~~~~~  110 (245)
T d1nkva_          97 ---ANEKCDVAACVGAT  110 (245)
T ss_dssp             ---CSSCEEEEEEESCG
T ss_pred             ---ccCceeEEEEEehh
Confidence               23679988876654

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=90.45  E-value=0.33  Score=35.37  Aligned_cols=34  Identities=15%  Similarity=0.131  Sum_probs=30.1

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCc
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS   93 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~   93 (365)
                      .+.++|.|| |-||.++|..|++.|.+|.++.+.+
T Consensus        26 p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~   59 (125)
T d1ojta2          26 PGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMD   59 (125)
T ss_dssp             CSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeec
Confidence            477888887 7799999999999999999998854

>d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermus thermophilus [TaxId: 274]

Probab=90.43  E-value=0.41  Score=37.46  Aligned_cols=65  Identities=11%  Similarity=0.145  Sum_probs=45.7

Q ss_pred             HHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhccCCCCCeeEEEecCCcc
Q 017812           76 AYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGIL  155 (365)
Q Consensus        76 a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~~~~~~id~lv~nAG~~  155 (365)
                      ++++.+++.+|+.++|+++..+.+.+    .. ..++.++..+.++.++.   ....        ..+.+|.++..-|+.
T Consensus        33 s~~iL~~~~~viaiD~D~~ai~~a~~----~~-~~~~~~~~~~f~~~~~~---l~~~--------~~~~vdgIl~DLGvS   96 (182)
T d1wg8a2          33 ARGILERGGRVIGLDQDPEAVARAKG----LH-LPGLTVVQGNFRHLKRH---LAAL--------GVERVDGILADLGVS   96 (182)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHH----TC-CTTEEEEESCGGGHHHH---HHHT--------TCSCEEEEEEECSCC
T ss_pred             HHHHhcccCcEEEEhhhhhHHHHHhh----cc-ccceeEeehHHHHHHHH---HHHc--------CCCccCEEEEEccCC
Confidence            45556677899999999987655433    12 45788999888875443   2221        346799999999986


Q ss_pred             c
Q 017812          156 A  156 (365)
Q Consensus       156 ~  156 (365)
                      .
T Consensus        97 s   97 (182)
T d1wg8a2          97 S   97 (182)
T ss_dssp             H
T ss_pred             H
Confidence            3

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=90.42  E-value=0.68  Score=35.66  Aligned_cols=125  Identities=10%  Similarity=0.010  Sum_probs=66.7

Q ss_pred             EEEEecCCChHHH--HHHHHHHHC----CCEEEEEecCchhHHHHHHHHHhhcC--CCceEEEEecCCChhhHHHHHHHH
Q 017812           61 VCIVTGATSGLGA--AAAYALSRE----GFHVVLVGRSSHLLSETMADITSRNK--DARLEAFQVDLSSFQSVLKFKDSL  132 (365)
Q Consensus        61 ~vlITGassGIG~--~~a~~la~~----G~~Vil~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dls~~~~v~~~~~~~  132 (365)
                      .+.|-|| |.+|.  ++...++..    +.+|++.+.++++++.....+.....  +....+...  +|.+   +.+   
T Consensus         4 KI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~--td~~---eaL---   74 (171)
T d1obba1           4 KIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKT--MNLD---DVI---   74 (171)
T ss_dssp             EEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEE--SCHH---HHH---
T ss_pred             EEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEe--CChh---hcc---
Confidence            3667776 44554  444555543    45999999999988766555544211  222222222  2222   211   


Q ss_pred             HHHHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhH---------HHH---------hHHHHHHHHHHhHhhhcCCCC
Q 017812          133 QQWLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMM---------STN---------YIGAFFLTKLLLPLLKNSPVP  194 (365)
Q Consensus       133 ~~~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~---------~vN---------~~~~~~l~~~~l~~~~~~~~~  194 (365)
                                ...|++|+.+++.+.......+.+....         +.+         .+-..-.++.+.+.+.+....
T Consensus        75 ----------~dad~Vv~~~~~g~~~~~~~~~~i~~~~g~~~~~~~~~~~~~g~~~~~~~~rn~~i~~~i~~~i~~~~p~  144 (171)
T d1obba1          75 ----------IDADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPK  144 (171)
T ss_dssp             ----------TTCSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTT
T ss_pred             ----------cCCCeEeeecccccccceeeehhcchhhhhccCCCccccCCCCCcceeeecchHHHHHHHHHHHHHHCcC
Confidence                      3489999999874221000000000000         001         234666777888887776556


Q ss_pred             CeEEEEcCCc
Q 017812          195 SRIVNVTSFT  204 (365)
Q Consensus       195 g~iV~vsS~~  204 (365)
                      +.++++|-..
T Consensus       145 a~~i~~TNPv  154 (171)
T d1obba1         145 AWYLQAANPI  154 (171)
T ss_dssp             CEEEECSSCH
T ss_pred             eEEEEECChH
Confidence            7888887644

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=90.11  E-value=0.78  Score=36.92  Aligned_cols=76  Identities=13%  Similarity=0.067  Sum_probs=58.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhc
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  138 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~  138 (365)
                      |.+||=.|++.|.   ++..|+++|++|+.++-++.-++.+.+.+...+. .++.+++.|..+..-              
T Consensus        17 ~~rILDiGcGtG~---~~~~la~~~~~v~gvD~S~~~l~~A~~~~~~~~~-~~~~~~~~d~~~~~~--------------   78 (234)
T d1xxla_          17 EHRVLDIGAGAGH---TALAFSPYVQECIGVDATKEMVEVASSFAQEKGV-ENVRFQQGTAESLPF--------------   78 (234)
T ss_dssp             TCEEEEESCTTSH---HHHHHGGGSSEEEEEESCHHHHHHHHHHHHHHTC-CSEEEEECBTTBCCS--------------
T ss_pred             CCEEEEeCCcCcH---HHHHHHHhCCeEEEEeCChhhhhhhhhhhccccc-ccccccccccccccc--------------
Confidence            7789999998884   4567778899999999999888888777766542 468899999876431              


Q ss_pred             cCCCCCeeEEEecCCc
Q 017812          139 SDMHSSIQLLINNAGI  154 (365)
Q Consensus       139 ~~~~~~id~lv~nAG~  154 (365)
                        ..+.+|+++.+-.+
T Consensus        79 --~~~~fD~v~~~~~l   92 (234)
T d1xxla_          79 --PDDSFDIITCRYAA   92 (234)
T ss_dssp             --CTTCEEEEEEESCG
T ss_pred             --cccccceeeeecee
Confidence              23679988876554

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=90.09  E-value=0.2  Score=40.84  Aligned_cols=34  Identities=26%  Similarity=0.520  Sum_probs=29.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCc
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS   93 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~   93 (365)
                      .|.|+|.|| |-.|..+|.+|+++|++|.++.|+.
T Consensus         6 ~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           6 QKRVVVLGS-GVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            456888887 5689999999999999999999864

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=90.04  E-value=0.31  Score=37.26  Aligned_cols=38  Identities=16%  Similarity=0.264  Sum_probs=34.9

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchh
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHL   95 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~   95 (365)
                      +.||+++|-|= |-+|+.+|.++...|++|+++..++-+
T Consensus        21 laGk~vvV~GY-G~vGrG~A~~~rg~Ga~V~V~E~DPi~   58 (163)
T d1v8ba1          21 ISGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPIC   58 (163)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHHH
T ss_pred             ecCCEEEEecc-cccchhHHHHHHhCCCEEEEEecCchh
Confidence            78999999986 569999999999999999999999854

>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Met-10+ protein-like
domain: Hypothetical protein PH0793
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=89.92  E-value=0.73  Score=38.13  Aligned_cols=73  Identities=14%  Similarity=0.167  Sum_probs=54.9

Q ss_pred             CCCEEEEecCC-ChHHHHHHHHHHHCC-CEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHH
Q 017812           58 KRPVCIVTGAT-SGLGAAAAYALSREG-FHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        58 ~~k~vlITGas-sGIG~~~a~~la~~G-~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      .|++||-.||+ |+++..+|    ++| ++|+.++.|+...+.+.+.++..+-..+++++..|..+..            
T Consensus       107 ~g~~VlD~~aG~G~~~l~~a----~~~~~~V~avd~n~~a~~~~~~N~~~n~l~~~v~~~~~D~~~~~------------  170 (260)
T d2frna1         107 PDELVVDMFAGIGHLSLPIA----VYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFP------------  170 (260)
T ss_dssp             TTCEEEETTCTTTTTHHHHH----HHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCC------------
T ss_pred             CccEEEECcceEcHHHHHHH----HhCCcEEEEecCCHHHHHHHHHHHHHhCCCceEEEEEcchHHhc------------
Confidence            48899999986 55555544    445 5999999999998888888877655567999999987532            


Q ss_pred             HhccCCCCCeeEEEec
Q 017812          136 LLDSDMHSSIQLLINN  151 (365)
Q Consensus       136 ~~~~~~~~~id~lv~n  151 (365)
                           ..+..|.+|.|
T Consensus       171 -----~~~~~D~Ii~~  181 (260)
T d2frna1         171 -----GENIADRILMG  181 (260)
T ss_dssp             -----CCSCEEEEEEC
T ss_pred             -----cCCCCCEEEEC
Confidence                 23568988865

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=89.75  E-value=0.25  Score=36.45  Aligned_cols=34  Identities=21%  Similarity=0.323  Sum_probs=30.1

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCc
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS   93 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~   93 (365)
                      ++.++|.|| |-+|.++|..|++.|.+|.++.+.+
T Consensus        35 ~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~   68 (133)
T d1q1ra2          35 DNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAA   68 (133)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhhCcceeeeeecc
Confidence            577888876 7899999999999999999999864

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=89.75  E-value=0.18  Score=41.95  Aligned_cols=35  Identities=17%  Similarity=0.171  Sum_probs=31.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEec
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGR   91 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r   91 (365)
                      +++|++|+|.| .|-+|..+|+.|.+.|++|+.++-
T Consensus        33 ~l~g~~v~IQG-fGnVG~~~a~~L~e~GakvvavsD   67 (255)
T d1bgva1          33 TLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLSG   67 (255)
T ss_dssp             CSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEEE
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEec
Confidence            47899999999 688999999999999999987753

>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Succinyl-CoA synthetase domains
family: Succinyl-CoA synthetase domains
domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=89.60  E-value=0.8  Score=34.75  Aligned_cols=83  Identities=16%  Similarity=0.176  Sum_probs=52.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCC---ChhhHHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLS---SFQSVLKFKDSLQQ  134 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls---~~~~v~~~~~~~~~  134 (365)
                      +|+.+.|.+.|||.|--++..+.+.|.++-  .-++    ++.+.+++..|.....--.+|++   +.+...+.++.+.+
T Consensus         2 ~G~rvaiit~sGG~~~l~aD~~~~~Gl~l~--~l~~----~t~~~L~~~lp~~~~~~NPlD~~~~~~~~~~~~~l~~~~~   75 (163)
T d2csua3           2 RGNKVAIMTNAGGPGVLTADELDKRGLKLA--TLEE----KTIEELRSFLPPMAAVKNPVDMIASARGEDYYRTAKLLLQ   75 (163)
T ss_dssp             SSSEEEEEESCHHHHHHHHHHHHTTTCEEC--CCCH----HHHHHHHHHSCTTCEESSEEECCTTCCHHHHHHHHHHHHH
T ss_pred             CCCeEEEEECChHHHHHHHHHHHHcCCccC--CCCH----HHHHHHHHhCCCcccCCCcccccCCCCHHHHHHHHHHHHc
Confidence            488899999999999999999999997764  2232    33444444444322222245554   44555555655554


Q ss_pred             HHhccCCCCCeeEEEecCC
Q 017812          135 WLLDSDMHSSIQLLINNAG  153 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG  153 (365)
                             ...+|.++....
T Consensus        76 -------d~~vd~v~v~~~   87 (163)
T d2csua3          76 -------DPNVDMLIAICV   87 (163)
T ss_dssp             -------STTCSEEEEEEE
T ss_pred             -------CCCcCEEEEeec
Confidence                   467887765443

>d2b3ta1 c.66.1.30 (A:2-275) N5-glutamine methyltransferase, HemK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Escherichia coli [TaxId: 562]

Probab=89.22  E-value=0.58  Score=39.11  Aligned_cols=77  Identities=14%  Similarity=0.132  Sum_probs=56.1

Q ss_pred             CCEEEEecC-CChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           59 RPVCIVTGA-TSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        59 ~k~vlITGa-ssGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      +..++=.|+ ||.||.++|.++  ..++|++++.+++.++.+.+.+...+- .++.+++.|+.+.-              
T Consensus       109 ~~~vlDlGtGSG~I~i~la~~~--p~~~v~avDis~~Al~~A~~Na~~~~~-~~v~~~~~d~~~~~--------------  171 (274)
T d2b3ta1         109 PCRILDLGTGTGAIALALASER--PDCEIIAVDRMPDAVSLAQRNAQHLAI-KNIHILQSDWFSAL--------------  171 (274)
T ss_dssp             CCEEEEETCTTSHHHHHHHHHC--TTSEEEEECSSHHHHHHHHHHHHHHTC-CSEEEECCSTTGGG--------------
T ss_pred             ccceeeeehhhhHHHHHHHhhC--CcceeeeccchhHHHhHHHHHHHHhCc-ccceeeeccccccc--------------
Confidence            345666665 466777776654  357999999999999888888876642 36899999986532              


Q ss_pred             ccCCCCCeeEEEecCCcc
Q 017812          138 DSDMHSSIQLLINNAGIL  155 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~  155 (365)
                         ...++|++|.|.-..
T Consensus       172 ---~~~~fDlIvsNPPYi  186 (274)
T d2b3ta1         172 ---AGQQFAMIVSNPPYI  186 (274)
T ss_dssp             ---TTCCEEEEEECCCCB
T ss_pred             ---CCCceeEEEecchhh
Confidence               125799999998764

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=88.97  E-value=0.29  Score=36.94  Aligned_cols=37  Identities=14%  Similarity=0.004  Sum_probs=29.4

Q ss_pred             EEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHH
Q 017812           62 CIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSET   99 (365)
Q Consensus        62 vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~   99 (365)
                      +-|- |.|-+|.++|+.|+++|++|+..+++.++....
T Consensus         3 IgiI-G~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~   39 (152)
T d1i36a2           3 VGFI-GFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIE   39 (152)
T ss_dssp             EEEE-SCSHHHHHHHHHHHHTTCEEEECCTTCCHHHHH
T ss_pred             EEEE-cHHHHHHHHHHHHHHCCCeEEEEcCchhHHHHH
Confidence            3344 558999999999999999999998887655443

>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein HI0319 (YecO)
domain: Hypothetical protein HI0319 (YecO)
species: Haemophilus influenzae [TaxId: 727]

Probab=88.87  E-value=0.75  Score=36.83  Aligned_cols=106  Identities=14%  Similarity=0.159  Sum_probs=71.3

Q ss_pred             CCEEEEecCCCh-HHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           59 RPVCIVTGATSG-LGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        59 ~k~vlITGassG-IG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      +.+||=-|++.| +...+++++...|++|+.++-+++-++.+.+.+.+......++....|..+.+              
T Consensus        40 ~~~vLDlGCGtG~~~~~l~~~~~~~~~~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~~d~~~~~--------------  105 (225)
T d1im8a_          40 DSNVYDLGCSRGAATLSARRNINQPNVKIIGIDNSQPMVERCRQHIAAYHSEIPVEILCNDIRHVE--------------  105 (225)
T ss_dssp             TCEEEEESCTTCHHHHHHHHTCCCSSCEEEEECSCHHHHHHHHHHHHTSCCSSCEEEECSCTTTCC--------------
T ss_pred             CCEEEEeccchhhHHHHHHHhhcCCCCceEEeCCCHHHHHHHHHHhHhhcccchhhhccchhhccc--------------
Confidence            568999998755 45666666666789999999999999998888877665667777777776532              


Q ss_pred             ccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEE
Q 017812          138 DSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNV  200 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~v  200 (365)
                          ....|+++.+....    .++.++..           .+++.+...++.   +|.+++.
T Consensus       106 ----~~~~d~i~~~~~l~----~~~~~d~~-----------~~l~~i~~~Lkp---gG~li~~  146 (225)
T d1im8a_         106 ----IKNASMVILNFTLQ----FLPPEDRI-----------ALLTKIYEGLNP---NGVLVLS  146 (225)
T ss_dssp             ----CCSEEEEEEESCGG----GSCGGGHH-----------HHHHHHHHHEEE---EEEEEEE
T ss_pred             ----cccceeeEEeeecc----ccChhhHH-----------HHHHHHHHhCCC---Cceeecc
Confidence                24567777665431    12233322           245556666665   4677764

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=88.68  E-value=0.22  Score=41.39  Aligned_cols=34  Identities=32%  Similarity=0.386  Sum_probs=28.7

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCc
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS   93 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~   93 (365)
                      +|.|+|.|| |-=|...|.+|+++|++|+++.++.
T Consensus         1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            577888887 5578899999999999999998764

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=88.63  E-value=0.28  Score=40.36  Aligned_cols=35  Identities=29%  Similarity=0.471  Sum_probs=31.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEec
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGR   91 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r   91 (365)
                      +++|++|+|-| .|-+|..+|+.|.+.|++|+.++-
T Consensus        28 ~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vsD   62 (242)
T d1v9la1          28 GIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVSD   62 (242)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEEC
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEeec
Confidence            47899999997 677999999999999999987764

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=88.59  E-value=0.2  Score=39.14  Aligned_cols=35  Identities=17%  Similarity=0.270  Sum_probs=29.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCch
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSSH   94 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~~   94 (365)
                      +|.|+|.|| |-.|...|..|+++|+ .|++..|+..
T Consensus         4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            567888887 6799999999999999 5989988754

>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glycine N-methyltransferase
domain: Glycine N-methyltransferase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=88.52  E-value=0.71  Score=38.70  Aligned_cols=111  Identities=14%  Similarity=0.170  Sum_probs=66.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCC---ceEEEEecCCChhhHHHHHHHHHHH
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDA---RLEAFQVDLSSFQSVLKFKDSLQQW  135 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~---~~~~~~~Dls~~~~v~~~~~~~~~~  135 (365)
                      ++.||=.|++.|.   ++..|+++|++|+.++.+++-++.+.+.........   ......+|....+.  .    ..  
T Consensus        57 ~~~vLD~GcG~G~---~~~~la~~g~~v~gvD~S~~ml~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----~~--  125 (292)
T d1xvaa_          57 CHRVLDVACGTGV---DSIMLVEEGFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDK--D----VP--  125 (292)
T ss_dssp             CCEEEESSCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHH--H----SC--
T ss_pred             CCEEEEecCCCcH---HHHHHHHcCCeeeeccCchHHHHHHHHHHHhcccccccceeeeeecccccccc--c----cC--
Confidence            5789999998776   467788899999999999998888777765543221   22334444433221  0    00  


Q ss_pred             HhccCCCCCeeEEEecCCcccCCC--CCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEE
Q 017812          136 LLDSDMHSSIQLLINNAGILATSS--RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVN  199 (365)
Q Consensus       136 ~~~~~~~~~id~lv~nAG~~~~~~--~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~  199 (365)
                           .....|.+++.........  ..+.++..           .+++.+...++.   +|.+|+
T Consensus       126 -----~~~~fd~v~~~~~~~~~~~~~~~~~~~~~-----------~~l~~~~~~Lkp---gG~li~  172 (292)
T d1xvaa_         126 -----AGDGFDAVICLGNSFAHLPDSKGDQSEHR-----------LALKNIASMVRP---GGLLVI  172 (292)
T ss_dssp             -----CTTCEEEEEECSSCGGGSCCTTSSSHHHH-----------HHHHHHHHTEEE---EEEEEE
T ss_pred             -----CCCCceEEEEecCchhhcCCcccChHHHH-----------HHHHHHHHHcCc---CcEEEE
Confidence                 2356898887554433221  11222222           245666666655   467665

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=88.28  E-value=0.87  Score=36.68  Aligned_cols=82  Identities=15%  Similarity=0.141  Sum_probs=59.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHH-CC----CEEEEEecCchhHHHHHHHHHhh----cCCCceEEEEecCCChhhHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSR-EG----FHVVLVGRSSHLLSETMADITSR----NKDARLEAFQVDLSSFQSVLKF  128 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~-~G----~~Vil~~r~~~~~~~~~~~l~~~----~~~~~~~~~~~Dls~~~~v~~~  128 (365)
                      .|..||..|+.+|--.++.-+++. .|    .+|+.+.++++-.+.+.+.+...    ..-.++.++..|..+...    
T Consensus        80 ~g~~VLeIGtGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~d~~~~~~----  155 (223)
T d1r18a_          80 PGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYP----  155 (223)
T ss_dssp             TTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCG----
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEecccccccc----
Confidence            478999999999988877777764 44    48999999998777776655432    112468888888764221    


Q ss_pred             HHHHHHHHhccCCCCCeeEEEecCCcc
Q 017812          129 KDSLQQWLLDSDMHSSIQLLINNAGIL  155 (365)
Q Consensus       129 ~~~~~~~~~~~~~~~~id~lv~nAG~~  155 (365)
                                  ..++.|.++.++++.
T Consensus       156 ------------~~~~fD~Iiv~~a~~  170 (223)
T d1r18a_         156 ------------PNAPYNAIHVGAAAP  170 (223)
T ss_dssp             ------------GGCSEEEEEECSCBS
T ss_pred             ------------cccceeeEEEEeech
Confidence                        346899999999873

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=87.79  E-value=0.21  Score=41.75  Aligned_cols=37  Identities=24%  Similarity=0.313  Sum_probs=32.7

Q ss_pred             CCCEEEEecCCChHHHHH-----HHHHHHCCCEEEEEecCch
Q 017812           58 KRPVCIVTGATSGLGAAA-----AYALSREGFHVVLVGRSSH   94 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~-----a~~la~~G~~Vil~~r~~~   94 (365)
                      .++.++|+.|-||.|+.+     |..|+++|.+|.+++-++.
T Consensus        18 ~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~   59 (279)
T d1ihua2          18 NEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA   59 (279)
T ss_dssp             TSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            367788888899999986     7999999999999999975

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=87.77  E-value=0.23  Score=41.15  Aligned_cols=31  Identities=29%  Similarity=0.477  Sum_probs=27.6

Q ss_pred             EEEecCCChHHHHHHHHHHHCCCEEEEEecCc
Q 017812           62 CIVTGATSGLGAAAAYALSREGFHVVLVGRSS   93 (365)
Q Consensus        62 vlITGassGIG~~~a~~la~~G~~Vil~~r~~   93 (365)
                      |+|.|| |-.|..+|.+|+++|.+|+++.++.
T Consensus         7 vvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIGG-GIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            777776 6799999999999999999999875

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=87.35  E-value=2.4  Score=31.13  Aligned_cols=87  Identities=7%  Similarity=0.079  Sum_probs=54.5

Q ss_pred             CCCEEEEecCC---ChHHHHHHHHHHHCCCEEEEEecCchhH--HHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHH
Q 017812           58 KRPVCIVTGAT---SGLGAAAAYALSREGFHVVLVGRSSHLL--SETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSL  132 (365)
Q Consensus        58 ~~k~vlITGas---sGIG~~~a~~la~~G~~Vil~~r~~~~~--~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~  132 (365)
                      +-|++.|.|||   +..|..+++.|.+.|++|+.+..+.+..  ..+...+.+.....++..+   +...+.+.++++++
T Consensus        18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i~G~~~~~sl~dlp~~iD~v~i---~vp~~~~~~~~~e~   94 (139)
T d2d59a1          18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLDIPDKIEVVDL---FVKPKLTMEYVEQA   94 (139)
T ss_dssp             HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGCSSCCSEEEE---CSCHHHHHHHHHHH
T ss_pred             cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccccCCCcccccccccCccceEEEE---EeCHHHHHHHHHHH
Confidence            35899999999   6799999999999999999987653211  0111112111111122111   13456677777777


Q ss_pred             HHHHhccCCCCCeeEEEecCCcc
Q 017812          133 QQWLLDSDMHSSIQLLINNAGIL  155 (365)
Q Consensus       133 ~~~~~~~~~~~~id~lv~nAG~~  155 (365)
                      .+        .++..++...|..
T Consensus        95 ~~--------~g~k~v~~~~G~~  109 (139)
T d2d59a1          95 IK--------KGAKVVWFQYNTY  109 (139)
T ss_dssp             HH--------HTCSEEEECTTCC
T ss_pred             HH--------hCCCEEEEecccc
Confidence            66        2466788888764

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=87.32  E-value=0.87  Score=32.40  Aligned_cols=34  Identities=15%  Similarity=0.045  Sum_probs=26.8

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHC---CCEEEEEecCc
Q 017812           59 RPVCIVTGATSGLGAAAAYALSRE---GFHVVLVGRSS   93 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~---G~~Vil~~r~~   93 (365)
                      .+.++|.|| |.+|.++|..|.+.   |.+|.++.|.+
T Consensus        20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~   56 (117)
T d1aoga2          20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGE   56 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred             CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccc
Confidence            467889988 88999999766554   56899998854

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=87.20  E-value=2.1  Score=32.31  Aligned_cols=42  Identities=12%  Similarity=-0.039  Sum_probs=26.0

Q ss_pred             EEEecCCChHHHHHHHH--HHHC----CCEEEEEecCchhHHHHHHHHH
Q 017812           62 CIVTGATSGLGAAAAYA--LSRE----GFHVVLVGRSSHLLSETMADIT  104 (365)
Q Consensus        62 vlITGassGIG~~~a~~--la~~----G~~Vil~~r~~~~~~~~~~~l~  104 (365)
                      +.|.||+| +|...+..  +...    +.+|++.+.++++++.+.+...
T Consensus         3 IaiIGaGs-~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~   50 (162)
T d1up7a1           3 IAVIGGGS-SYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVK   50 (162)
T ss_dssp             EEEETTTC-TTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHH
T ss_pred             EEEECCCH-HHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHH
Confidence            66777754 55444432  2222    3589999999998876544433

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=86.93  E-value=0.3  Score=39.95  Aligned_cols=34  Identities=32%  Similarity=0.379  Sum_probs=29.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHH-CCCEEEEEe
Q 017812           56 GIKRPVCIVTGATSGLGAAAAYALSR-EGFHVVLVG   90 (365)
Q Consensus        56 ~~~~k~vlITGassGIG~~~a~~la~-~G~~Vil~~   90 (365)
                      +++|++++|-| .|-+|..+|+.|++ .|++|+.++
T Consensus        28 ~l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vs   62 (234)
T d1b26a1          28 DPKKATVAVQG-FGNVGQFAALLISQELGSKVVAVS   62 (234)
T ss_dssp             CTTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEE
T ss_pred             CcCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEee
Confidence            47899999987 68899999999985 599998776

>d2fr1a2 c.2.1.2 (A:1448-1656) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=86.83  E-value=5.6  Score=30.84  Aligned_cols=141  Identities=12%  Similarity=0.050  Sum_probs=78.5

Q ss_pred             CCCCEEEEecCC--ChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           57 IKRPVCIVTGAT--SGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        57 ~~~k~vlITGas--sGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      ..|.++++....  ...+.+++..|...|..++.+.-+.+                         .+   ...+.+.+. 
T Consensus        23 ~~g~~lv~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~-------------------------~~---~~~l~~~~~-   73 (209)
T d2fr1a2          23 LDGTWLVAKYAGTADETSTAAREALESAGARVRELVVDAR-------------------------CG---RDELAERLR-   73 (209)
T ss_dssp             CCSEEEEEECTTSSHHHHHHHHHHHHTTSCEEEEEECCTT-------------------------CC---HHHHHHHHT-
T ss_pred             CCCcEEEEeCCCCchHHHHHHHHHHHhCCCeEEEecCCCc-------------------------cC---HHHHHHHhh-
Confidence            456666666443  34777888889999988876654322                         11   122222222 


Q ss_pred             HHhccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEcCCcccccccccCC
Q 017812          135 WLLDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVN  214 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vsS~~~~~~~~~~~~  214 (365)
                            ..+.++.+|+-.+..........     ...-.+.+.+.+++.+...    +...++.+++..+...       
T Consensus        74 ------~~~~~~~vv~l~~~~~~~~~~~~-----~~~~~~~~~l~l~qal~~~----~~~~~l~~vT~~a~~~-------  131 (209)
T d2fr1a2          74 ------SVGEVAGVLSLLAVDEAEPEEAP-----LALASLADTLSLVQAMVSA----ELGCPLWTVTESAVAT-------  131 (209)
T ss_dssp             ------TSCCCSEEEECTTTTCCCCSSCG-----GGCHHHHHHHHHHHHHHHT----TCCCCEEEEEESCSCS-------
T ss_pred             ------ccCCCCeEEEeCCCCCCCCcchh-----HHHHHHHHHHHHHHHHHhC----CCCCcEEEEEcCCccc-------
Confidence                  34678888887765432222111     1122344555666665432    2246777777654320       


Q ss_pred             CccccccccccCCCCChhhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEec
Q 017812          215 NETITGKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRHVSVIAAD  267 (365)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~gi~v~~v~  267 (365)
                                    ...-..-....+++-+|+++++.|+     +++++-+|.
T Consensus       132 --------------~~~d~~~~p~~A~l~Gl~r~~~~E~-----P~l~~~~vD  165 (209)
T d2fr1a2         132 --------------GPFERVRNAAHGALWGVGRVIALEN-----PAVWGGLVD  165 (209)
T ss_dssp             --------------STTSCCSCGGGHHHHHHHHHHHHHC-----GGGEEEEEE
T ss_pred             --------------CCCcccCCHhHHhHHHHHHHHHHhC-----CCceEEEEE
Confidence                          0111122456888999999999996     566655554

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=86.68  E-value=3  Score=31.10  Aligned_cols=44  Identities=16%  Similarity=0.279  Sum_probs=31.2

Q ss_pred             CEEEEecCCChHHHHHHHHHHHCC--CEEEEEe--cCchhHHHHHHHH
Q 017812           60 PVCIVTGATSGLGAAAAYALSREG--FHVVLVG--RSSHLLSETMADI  103 (365)
Q Consensus        60 k~vlITGassGIG~~~a~~la~~G--~~Vil~~--r~~~~~~~~~~~l  103 (365)
                      |.+.|-|+||-||.....-..+.-  ++|+..+  +|.+.+.+...+.
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~~f   49 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEF   49 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHHH
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHHHH
Confidence            579999999999999999888873  6777553  3444444444333

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=86.36  E-value=0.43  Score=36.30  Aligned_cols=35  Identities=23%  Similarity=0.209  Sum_probs=29.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCC--EEEEEecCc
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGF--HVVLVGRSS   93 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~--~Vil~~r~~   93 (365)
                      .||.|+|.||+ -.|.++|..|.+.|.  +|+++.+++
T Consensus         1 ~gkrivIvGgG-~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGGG-TGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECCS-HHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECcc-HHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            38999999984 579999999999884  889988765

>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein ECA1738
species: Erwinia carotovora [TaxId: 554]

Probab=86.21  E-value=0.84  Score=36.57  Aligned_cols=71  Identities=10%  Similarity=0.078  Sum_probs=51.1

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      ++++.||=-||+.|.   +++.|+++|++|+.++-+++.++.+.+..     ...+.++..|+.+..             
T Consensus        19 ~~~~~VLDiGcG~G~---~~~~l~~~g~~v~giD~s~~~i~~a~~~~-----~~~~~~~~~~~~~~~-------------   77 (225)
T d2p7ia1          19 FRPGNLLELGSFKGD---FTSRLQEHFNDITCVEASEEAISHAQGRL-----KDGITYIHSRFEDAQ-------------   77 (225)
T ss_dssp             CCSSCEEEESCTTSH---HHHHHTTTCSCEEEEESCHHHHHHHHHHS-----CSCEEEEESCGGGCC-------------
T ss_pred             CCCCcEEEEeCCCcH---HHHHHHHcCCeEEEEeCcHHHhhhhhccc-----ccccccccccccccc-------------
Confidence            356789999988764   35678889999999999988776655442     336788888876542             


Q ss_pred             hccCCCCCeeEEEecC
Q 017812          137 LDSDMHSSIQLLINNA  152 (365)
Q Consensus       137 ~~~~~~~~id~lv~nA  152 (365)
                          ..+..|++++..
T Consensus        78 ----~~~~fD~I~~~~   89 (225)
T d2p7ia1          78 ----LPRRYDNIVLTH   89 (225)
T ss_dssp             ----CSSCEEEEEEES
T ss_pred             ----cccccccccccc
Confidence                225799988654

>d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Adrenal gland protein AD-003 (C9orf32)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.97  E-value=1.7  Score=34.51  Aligned_cols=77  Identities=16%  Similarity=0.087  Sum_probs=55.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHC-CCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSRE-GFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~-G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      .++.||=.||+.|.   .+..|+++ +.+|+.++-+++.++.+.+.+...+ ...+.++..|+.+...            
T Consensus        60 ~~~~vLDiGcG~G~---~~~~l~~~~~~~v~~vD~s~~~l~~ak~~~~~~~-~~~~~f~~~d~~~~~~------------  123 (222)
T d2ex4a1          60 GTSCALDCGAGIGR---ITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEG-KRVRNYFCCGLQDFTP------------  123 (222)
T ss_dssp             CCSEEEEETCTTTH---HHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGG-GGEEEEEECCGGGCCC------------
T ss_pred             CCCEEEEeccCCCH---hhHHHHHhcCCEEEEeecCHHHhhcccccccccc-cccccccccccccccc------------
Confidence            46789999998764   44444544 4589999999988888777765543 3467889999887531            


Q ss_pred             hccCCCCCeeEEEecCCc
Q 017812          137 LDSDMHSSIQLLINNAGI  154 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~  154 (365)
                          ..+..|+++.+..+
T Consensus       124 ----~~~~fD~I~~~~~l  137 (222)
T d2ex4a1         124 ----EPDSYDVIWIQWVI  137 (222)
T ss_dssp             ----CSSCEEEEEEESCG
T ss_pred             ----cccccccccccccc
Confidence                34679999877654

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=85.95  E-value=0.66  Score=37.44  Aligned_cols=37  Identities=24%  Similarity=0.383  Sum_probs=31.9

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCch
Q 017812           57 IKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH   94 (365)
Q Consensus        57 ~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~   94 (365)
                      -.+|.|+|.||+ -.|...|.+|+++|++|.++.++.+
T Consensus        47 ~~~k~VvIIGaG-pAGl~aA~~l~~~G~~v~l~E~~~~   83 (233)
T d1djqa3          47 KNKDSVLIVGAG-PSGSEAARVLMESGYTVHLTDTAEK   83 (233)
T ss_dssp             SSCCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             cCCceEEEEccc-HHHHHHHHHHHHhccceeeEeeccc
Confidence            467899999984 5789999999999999999988654

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=85.87  E-value=0.21  Score=39.78  Aligned_cols=32  Identities=19%  Similarity=0.229  Sum_probs=28.0

Q ss_pred             CEEEEecCCChHHHH-----HHHHHHHCCCEEEEEec
Q 017812           60 PVCIVTGATSGLGAA-----AAYALSREGFHVVLVGR   91 (365)
Q Consensus        60 k~vlITGassGIG~~-----~a~~la~~G~~Vil~~r   91 (365)
                      |...|||-++|.|+.     +|+.|+++|.+|.+++-
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id~   38 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYKP   38 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEECS
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEECc
Confidence            679999999999985     67899999999999863

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=85.84  E-value=0.24  Score=34.97  Aligned_cols=40  Identities=10%  Similarity=-0.007  Sum_probs=33.0

Q ss_pred             CCCCCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCch
Q 017812           54 ITGIKRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH   94 (365)
Q Consensus        54 ~~~~~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~   94 (365)
                      ..+++||.|+|.|++ --|..+|..|++.+.+++...|...
T Consensus        27 ~~~f~gK~VlVVG~g-~Sa~dia~~l~~~ak~v~~~~~r~~   66 (107)
T d2gv8a2          27 PELFVGESVLVVGGA-SSANDLVRHLTPVAKHPIYQSLLGG   66 (107)
T ss_dssp             GGGGTTCCEEEECSS-HHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred             hhhcCCCeEEEECCC-CCHHHHHHHHHHhcCEEEEEEecCc
Confidence            346899999999987 4788999999999888887777643

>d2eyqa5 c.37.1.19 (A:779-989) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Tandem AAA-ATPase domain
domain: Transcription-repair coupling factor, TRCF
species: Escherichia coli [TaxId: 562]

Probab=85.36  E-value=1.4  Score=35.09  Aligned_cols=66  Identities=9%  Similarity=0.131  Sum_probs=55.5

Q ss_pred             HHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhccCCCCCeeEEEecCCc
Q 017812           80 SREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGI  154 (365)
Q Consensus        80 a~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~~~~~~id~lv~nAG~  154 (365)
                      ..+|-+|+.++...+..+++.+.+.+..|+.++..+...+++ ++.++.+..+.+        +.+|+||+..=+
T Consensus        28 l~rGgQvy~V~p~I~~~e~~~~~l~~~~p~~~i~~lHGkm~~-~eke~im~~F~~--------g~~~ILv~TtvI   93 (211)
T d2eyqa5          28 ILRGGQVYYLYNDVENIQKAAERLAELVPEARIAIGHGQMRE-RELERVMNDFHH--------QRFNVLVCTTII   93 (211)
T ss_dssp             HTTTCEEEEECCCSSCHHHHHHHHHHHCTTSCEEECCSSCCH-HHHHHHHHHHHT--------TSCCEEEESSTT
T ss_pred             HHcCCeEEEEEcCccchhhHHHHHHHhCCceEEEEEEeccCH-HHHHHHHHHHHc--------CCcceEEEehhh
Confidence            457999999999999999999999999999999999999976 456677777665        889999988743

>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical methyltransferase TM1389
species: Thermotoga maritima [TaxId: 2336]

Probab=85.13  E-value=2  Score=34.29  Aligned_cols=71  Identities=17%  Similarity=0.224  Sum_probs=49.8

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhc
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  138 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~  138 (365)
                      ++.||=.||+.|.   .+..|++.|++|+.++.+++.++.+.+.    ..   ...+..|..+..-              
T Consensus        43 ~~~vLDiGcG~G~---~~~~l~~~~~~v~giD~s~~~l~~a~~~----~~---~~~~~~~~~~l~~--------------   98 (246)
T d2avna1          43 PCRVLDLGGGTGK---WSLFLQERGFEVVLVDPSKEMLEVAREK----GV---KNVVEAKAEDLPF--------------   98 (246)
T ss_dssp             CCEEEEETCTTCH---HHHHHHTTTCEEEEEESCHHHHHHHHHH----TC---SCEEECCTTSCCS--------------
T ss_pred             CCEEEEECCCCch---hcccccccceEEEEeecccccccccccc----cc---ccccccccccccc--------------
Confidence            5679999998775   4567888999999999998776655432    21   2356677766420              


Q ss_pred             cCCCCCeeEEEecCCcc
Q 017812          139 SDMHSSIQLLINNAGIL  155 (365)
Q Consensus       139 ~~~~~~id~lv~nAG~~  155 (365)
                        ..+..|++++...+.
T Consensus        99 --~~~~fD~ii~~~~~~  113 (246)
T d2avna1          99 --PSGAFEAVLALGDVL  113 (246)
T ss_dssp             --CTTCEEEEEECSSHH
T ss_pred             --ccccccceeeecchh
Confidence              236799999877654

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=85.05  E-value=1.7  Score=32.40  Aligned_cols=71  Identities=15%  Similarity=0.118  Sum_probs=44.6

Q ss_pred             EEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCC----CceEEEEecCCChhhHHHHHHHHHH
Q 017812           62 CIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKD----ARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        62 vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~----~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      +-+-|- |-+|..+|++|.+.|+.+ ...|+.++..+..++.......    .....+...+.+.+.+....+.+..
T Consensus         3 Ig~IGl-G~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~l~~   77 (156)
T d2cvza2           3 VAFIGL-GAMGYPMAGHLARRFPTL-VWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYP   77 (156)
T ss_dssp             EEEECC-STTHHHHHHHHHTTSCEE-EECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHTT
T ss_pred             EEEEeH-HHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHHHcCCcccccccccceeEEEecccchhhhhhhhccccc
Confidence            445555 779999999999888755 6888888777666654221100    1223344455566677766666554

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=84.70  E-value=0.53  Score=36.58  Aligned_cols=42  Identities=24%  Similarity=0.394  Sum_probs=32.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHh
Q 017812           61 VCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITS  105 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~  105 (365)
                      .|.|-|| |..|.++|..|++.|.+|.+++|..+.  +..+.+.+
T Consensus         2 kI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~~--~~~~~i~~   43 (180)
T d1txga2           2 IVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDT--EILKSISA   43 (180)
T ss_dssp             EEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGH--HHHHHHHT
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEEecccH--HHHHHHhh
Confidence            3567776 679999999999999999999996542  34455544

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=84.39  E-value=0.64  Score=37.81  Aligned_cols=35  Identities=31%  Similarity=0.296  Sum_probs=29.2

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCch
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH   94 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~   94 (365)
                      .+.|+|.|| |--|..+|..|+++|.+|+++.|+.+
T Consensus         4 ~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~~   38 (265)
T d2voua1           4 TDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSPQ   38 (265)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            356888887 45788899999999999999998653

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=84.25  E-value=0.37  Score=38.81  Aligned_cols=35  Identities=20%  Similarity=0.283  Sum_probs=30.5

Q ss_pred             CCEEEEecCCChHHHH-----HHHHHHHCCCEEEEEecCc
Q 017812           59 RPVCIVTGATSGLGAA-----AAYALSREGFHVVLVGRSS   93 (365)
Q Consensus        59 ~k~vlITGassGIG~~-----~a~~la~~G~~Vil~~r~~   93 (365)
                      ||++.|+|+-||.|+.     +|..|+++|.+|.+++-|.
T Consensus         2 ~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D~   41 (237)
T d1g3qa_           2 GRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDL   41 (237)
T ss_dssp             CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred             CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            6899999999999975     6788999999999999764

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=83.86  E-value=1  Score=33.92  Aligned_cols=37  Identities=32%  Similarity=0.317  Sum_probs=27.0

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEecCc
Q 017812           55 TGIKRPVCIVTGATSGLGAAAAYALSREGF-HVVLVGRSS   93 (365)
Q Consensus        55 ~~~~~k~vlITGassGIG~~~a~~la~~G~-~Vil~~r~~   93 (365)
                      ..+.+| |+|.|| |-.|...|..+.+.|+ .|+++.|..
T Consensus        42 p~~~~k-VvVIGG-GdtA~D~A~~a~r~GA~~V~vi~rr~   79 (153)
T d1gtea3          42 PSIRGA-VIVLGA-GDTAFDCATSALRCGARRVFLVFRKG   79 (153)
T ss_dssp             CCCCSE-EEEECS-SHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred             ccCCCE-EEEECC-ChhHHHHHHHHHHcCCcceeEEEeCC
Confidence            334555 555554 5688899999999998 587888754

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=83.28  E-value=0.51  Score=39.05  Aligned_cols=31  Identities=39%  Similarity=0.667  Sum_probs=26.8

Q ss_pred             EEEecCCChHHHHHHHHHHHCCCEEEEEecCc
Q 017812           62 CIVTGATSGLGAAAAYALSREGFHVVLVGRSS   93 (365)
Q Consensus        62 vlITGassGIG~~~a~~la~~G~~Vil~~r~~   93 (365)
                      |+|.|| |-.|..+|.+|+++|.+|+++.+..
T Consensus         6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~~   36 (281)
T d2gf3a1           6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAFD   36 (281)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            677776 5689999999999999999999853

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=83.21  E-value=0.51  Score=39.61  Aligned_cols=31  Identities=19%  Similarity=0.433  Sum_probs=26.8

Q ss_pred             EEEecCCChHHHHHHHHHHHCCC-EEEEEecCc
Q 017812           62 CIVTGATSGLGAAAAYALSREGF-HVVLVGRSS   93 (365)
Q Consensus        62 vlITGassGIG~~~a~~la~~G~-~Vil~~r~~   93 (365)
                      |+|.|| |-+|..+|.+|+++|. +|++++|+.
T Consensus         4 ViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           4 IVIIGA-GIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             EEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            788887 5799999999999997 699998864

>d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Carminomycin 4-O-methyltransferase
species: Streptomyces peucetius [TaxId: 1950]

Probab=82.93  E-value=6.8  Score=31.48  Aligned_cols=103  Identities=11%  Similarity=0.052  Sum_probs=64.8

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHC--CCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHH
Q 017812           59 RPVCIVTGATSGLGAAAAYALSRE--GFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWL  136 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~--G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~  136 (365)
                      .++||=.||+.|.   ++..|+++  +.+++.++. ++.++.+.+.+.+.+...++.++..|+.+..             
T Consensus        81 ~~~VLDvGcG~G~---~~~~la~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~rv~~~~~D~~~~~-------------  143 (253)
T d1tw3a2          81 VRHVLDVGGGKGG---FAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFEPL-------------  143 (253)
T ss_dssp             CSEEEEETCTTSH---HHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTSCC-------------
T ss_pred             CCEEEEeCCCCCH---HHHHHHHhcceeEEEEccC-HHHHHHHHHHHHHhhcccchhhccccchhhc-------------
Confidence            4788888887663   34445544  468888886 5667777777777655678999999986521             


Q ss_pred             hccCCCCCeeEEEecCCcccCCCCCCHHHHhHhHHHHhHHHHHHHHHHhHhhhcCCCCCeEEEEc
Q 017812          137 LDSDMHSSIQLLINNAGILATSSRLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVT  201 (365)
Q Consensus       137 ~~~~~~~~id~lv~nAG~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~~~~~~~~g~iV~vs  201 (365)
                           ..+.|+++.+.-+ .   ..+.++.           ..+++.+.+.|+.   +|+++++-
T Consensus       144 -----~~~~D~v~~~~vl-h---~~~d~~~-----------~~~L~~~~~~LkP---GG~l~i~e  185 (253)
T d1tw3a2         144 -----PRKADAIILSFVL-L---NWPDHDA-----------VRILTRCAEALEP---GGRILIHE  185 (253)
T ss_dssp             -----SSCEEEEEEESCG-G---GSCHHHH-----------HHHHHHHHHTEEE---EEEEEEEE
T ss_pred             -----ccchhheeecccc-c---cCCchhh-----------HHHHHHHHHhcCC---CcEEEEEe
Confidence                 2357888866543 1   1222221           2345666666654   47887653

>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: BC2162-like
domain: Methyltransferase BC2162
species: Bacillus cereus [TaxId: 1396]

Probab=82.70  E-value=1.8  Score=35.91  Aligned_cols=75  Identities=17%  Similarity=0.132  Sum_probs=54.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHH---CCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSR---EGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~---~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      +..+||=.|++.|   .++..|++   .|++|+.++.++..++.+.+.+...  +.++.+...|+.+.+           
T Consensus        27 ~~~~ILDiGcG~G---~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~--~~~~~f~~~d~~~~~-----------   90 (281)
T d2gh1a1          27 KPVHIVDYGCGYG---YLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLL--PYDSEFLEGDATEIE-----------   90 (281)
T ss_dssp             SCCEEEEETCTTT---HHHHHHTTTSCTTCEEEEEECCHHHHHHHHHHHHSS--SSEEEEEESCTTTCC-----------
T ss_pred             CcCEEEEecCcCC---HHHHHHHHhCCCCCEEEEEecchhHhhhhhcccccc--ccccccccccccccc-----------
Confidence            3567998998766   33444444   5789999999999888887777655  347888889987643           


Q ss_pred             HHhccCCCCCeeEEEecCCc
Q 017812          135 WLLDSDMHSSIQLLINNAGI  154 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG~  154 (365)
                            ..+..|+++.+..+
T Consensus        91 ------~~~~fD~v~~~~~l  104 (281)
T d2gh1a1          91 ------LNDKYDIAICHAFL  104 (281)
T ss_dssp             ------CSSCEEEEEEESCG
T ss_pred             ------ccCCceEEEEehhh
Confidence                  12469999988765

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=82.67  E-value=0.66  Score=39.33  Aligned_cols=32  Identities=28%  Similarity=0.439  Sum_probs=23.7

Q ss_pred             CEEEEecCCChHHH-----HHHHHHHHCCCEEEEEecC
Q 017812           60 PVCIVTGATSGLGA-----AAAYALSREGFHVVLVGRS   92 (365)
Q Consensus        60 k~vlITGassGIG~-----~~a~~la~~G~~Vil~~r~   92 (365)
                      |.++|++|++| |-     +++++|.++|++|..++..
T Consensus         1 kkili~~~GtG-GHv~~a~al~~~L~~~G~eV~~i~~~   37 (351)
T d1f0ka_           1 KRLMVMAGGTG-GHVFPGLAVAHHLMAQGWQVRWLGTA   37 (351)
T ss_dssp             CEEEEECCSSH-HHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred             CEEEEEcCCcH-HHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence            45666665545 54     6889999999999887754

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=82.65  E-value=0.61  Score=39.14  Aligned_cols=35  Identities=29%  Similarity=0.436  Sum_probs=30.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCc
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSS   93 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~   93 (365)
                      +.|.|+|.||. --|...|.+|+++|++|+++.++.
T Consensus        29 ~pkkV~IIGaG-~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          29 NPKHVVIVGAG-MAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             SCCEEEEECCB-HHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCeEEEECCC-HHHHHHHHHHHHCCCCEEEEeCCC
Confidence            45789999985 469999999999999999998865

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=82.42  E-value=0.59  Score=37.19  Aligned_cols=31  Identities=23%  Similarity=0.240  Sum_probs=27.2

Q ss_pred             EEEecCCChHHHHHHHHHHHCCCEEEEEecCc
Q 017812           62 CIVTGATSGLGAAAAYALSREGFHVVLVGRSS   93 (365)
Q Consensus        62 vlITGassGIG~~~a~~la~~G~~Vil~~r~~   93 (365)
                      |+|.|| |--|..+|.+|+++|.+|.++.++.
T Consensus         8 viViGa-G~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLGT-GITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            788884 6679999999999999999999975

>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Methoxy mycolic acid synthase 4, Mma4
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=82.22  E-value=1.9  Score=35.81  Aligned_cols=61  Identities=8%  Similarity=0.020  Sum_probs=46.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHC-CCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCC
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSRE-GFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSS  121 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~-G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~  121 (365)
                      .|.+||=.|++-|   .++..++++ |++|+.++.+++..+.+.+.+.+.+-...+.+...|..+
T Consensus        52 ~g~~VLDiGCG~G---~~a~~~a~~~g~~v~gi~ls~~q~~~a~~~~~~~~l~~~~~~~~~d~~~  113 (280)
T d2fk8a1          52 PGMTLLDIGCGWG---TTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWED  113 (280)
T ss_dssp             TTCEEEEESCTTS---HHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGG
T ss_pred             CCCEEEEecCCch---HHHHHHHHhCceeEEEecchHHHHHHHHHHHHhhccccchhhhhhhhhh
Confidence            4889999999866   345666655 899999999999998888888777655666666666543

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=82.12  E-value=2.5  Score=29.70  Aligned_cols=34  Identities=18%  Similarity=0.125  Sum_probs=27.2

Q ss_pred             CCEEEEecCCChHHHHHHHHHHH---CCCEEEEEecCc
Q 017812           59 RPVCIVTGATSGLGAAAAYALSR---EGFHVVLVGRSS   93 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~---~G~~Vil~~r~~   93 (365)
                      .|.++|.|| |.+|.++|..|++   .|.+|.++.|.+
T Consensus        18 p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~   54 (117)
T d1feca2          18 PKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGD   54 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSS
T ss_pred             CCeEEEECC-ChHHHHHHHHhHhhcccccccceecccc
Confidence            367888887 6799999987665   488999998864

>d1peya_ c.23.1.1 (A:) Sporulation response regulator Spo0F {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Sporulation response regulator Spo0F
species: Bacillus subtilis [TaxId: 1423]

Probab=81.89  E-value=5.9  Score=27.75  Aligned_cols=81  Identities=11%  Similarity=0.295  Sum_probs=53.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhc
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLD  138 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~  138 (365)
                      +|.|||.=-...+-..+.+.|.+.|++|..+.. .   +++.+.+.+.  ...+.++-+.+-+.+.+ ++++++++    
T Consensus         1 NkrILvVDD~~~~~~~l~~~L~~~g~~v~~a~~-g---~eal~~~~~~--~~dlillD~~mP~~~G~-el~~~lr~----   69 (119)
T d1peya_           1 NEKILIVDDQSGIRILLNEVFNKEGYQTFQAAN-G---LQALDIVTKE--RPDLVLLDMKIPGMDGI-EILKRMKV----   69 (119)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEESS-H---HHHHHHHHHH--CCSEEEEESCCTTCCHH-HHHHHHHH----
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCEEEEeCC-H---HHHHHHHHhC--CCCEEEEeccCCCCCHH-HHHHHHHH----
Confidence            467888888888999999999999999875443 2   3344444444  34555555555566554 56677776    


Q ss_pred             cCCCCCeeEEEecC
Q 017812          139 SDMHSSIQLLINNA  152 (365)
Q Consensus       139 ~~~~~~id~lv~nA  152 (365)
                        ....+-+++..+
T Consensus        70 --~~~~~pvi~lt~   81 (119)
T d1peya_          70 --IDENIRVIIMTA   81 (119)
T ss_dssp             --HCTTCEEEEEES
T ss_pred             --hCCCCcEEEEec
Confidence              334566776654

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=81.80  E-value=1.9  Score=32.69  Aligned_cols=83  Identities=14%  Similarity=0.207  Sum_probs=53.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHC-CCEEEEE-ecCchh-HHHHHHHH--------------HhhcCCCceEEEEecCCChh
Q 017812           61 VCIVTGATSGLGAAAAYALSRE-GFHVVLV-GRSSHL-LSETMADI--------------TSRNKDARLEAFQVDLSSFQ  123 (365)
Q Consensus        61 ~vlITGassGIG~~~a~~la~~-G~~Vil~-~r~~~~-~~~~~~~l--------------~~~~~~~~~~~~~~Dls~~~  123 (365)
                      .+.|.|++|-+|+++++...+. +++++.. +|.... ..+-..++              ....  ... =+..|+|.++
T Consensus         6 kI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~--~~~-DViIDFs~p~   82 (162)
T d1diha1           6 RVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVK--DDF-DVFIDFTRPE   82 (162)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTT--TSC-SEEEECSCHH
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCceeeccHHHHh--ccc-ceEEEeccHH
Confidence            5999999999999999998876 5676543 443211 00000000              0000  011 1558999999


Q ss_pred             hHHHHHHHHHHHHhccCCCCCeeEEEecCCc
Q 017812          124 SVLKFKDSLQQWLLDSDMHSSIQLLINNAGI  154 (365)
Q Consensus       124 ~v~~~~~~~~~~~~~~~~~~~id~lv~nAG~  154 (365)
                      ...+.++.+.+        .++.+++-..|.
T Consensus        83 ~~~~~~~~a~~--------~~~~~ViGTTG~  105 (162)
T d1diha1          83 GTLNHLAFCRQ--------HGKGMVIGTTGF  105 (162)
T ss_dssp             HHHHHHHHHHH--------TTCEEEECCCCC
T ss_pred             HHHHHHHHHHh--------ccceeEEecCCC
Confidence            99999988776        468888877775

>d2h00a1 c.66.1.54 (A:5-254) Methyltransferase 10 domain containing protein METT10D {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Methyltransferase 10 domain
domain: Methyltransferase 10 domain containing protein METT10D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.77  E-value=1.7  Score=35.48  Aligned_cols=86  Identities=12%  Similarity=0.157  Sum_probs=60.3

Q ss_pred             CCEEEEecCC-ChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           59 RPVCIVTGAT-SGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        59 ~k~vlITGas-sGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      ...++=.|.+ |.|+..++.++  .+++|+.++.+++.++-+.+.++..+-..++.++..|..+.  +..   .+..   
T Consensus        62 ~~~~LDiGtGsg~I~~~l~~~~--~~~~~~~~Di~~~al~~A~~N~~~n~l~~~~~~~~~~~~~~--~~~---~~~~---  131 (250)
T d2h00a1          62 LRRGIDIGTGASCIYPLLGATL--NGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTL--LMD---ALKE---  131 (250)
T ss_dssp             CCEEEEESCTTTTHHHHHHHHH--HCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCS--STT---TSTT---
T ss_pred             cceEEEeCCCchHHHHHHHHhC--CCccccceecCHHHHHHHHHHHHHhCCCcceeeeeeccHHh--hhh---hhhh---
Confidence            3467777765 66999999877  37899999999999999888887766567787777654331  100   0000   


Q ss_pred             ccCCCCCeeEEEecCCccc
Q 017812          138 DSDMHSSIQLLINNAGILA  156 (365)
Q Consensus       138 ~~~~~~~id~lv~nAG~~~  156 (365)
                        ...+.+|++|+|.-...
T Consensus       132 --~~~~~fD~ivsNPPY~~  148 (250)
T d2h00a1         132 --ESEIIYDFCMCNPPFFA  148 (250)
T ss_dssp             --CCSCCBSEEEECCCCC-
T ss_pred             --cccCceeEEEecCcccc
Confidence              03467999999998753

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=81.75  E-value=0.86  Score=38.72  Aligned_cols=35  Identities=23%  Similarity=0.390  Sum_probs=29.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCch
Q 017812           59 RPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSH   94 (365)
Q Consensus        59 ~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~   94 (365)
                      .|.|+|.|| |--|..+|.+|+++|.+|.++.++..
T Consensus         2 ~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~~   36 (314)
T d2bi7a1           2 SKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRDH   36 (314)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCCC
Confidence            578899987 45678899999999999999988754

>d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA1
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=81.74  E-value=2.1  Score=35.74  Aligned_cols=61  Identities=10%  Similarity=-0.033  Sum_probs=47.3

Q ss_pred             CCCEEEEecCCCh-HHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCC
Q 017812           58 KRPVCIVTGATSG-LGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSS  121 (365)
Q Consensus        58 ~~k~vlITGassG-IG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~  121 (365)
                      .|.+||=.|++-| ....+|++   .|++|+.+..+++..+.+.+.+.+.+...++.+..+|..+
T Consensus        62 ~G~~VLDiGCG~G~~a~~~a~~---~g~~v~git~s~~Q~~~a~~~~~~~g~~~~v~~~~~d~~~  123 (285)
T d1kpga_          62 PGMTLLDVGCGWGATMMRAVEK---YDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQ  123 (285)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHH---HCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGG
T ss_pred             CCCEEEEecCcchHHHHHHHhc---CCcceEEEeccHHHHHHHHHHHHhhhhhhhhHHHHhhhhc
Confidence            4889999999744 44444443   5899999999999988888888777666788888888644

>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=81.70  E-value=0.45  Score=38.18  Aligned_cols=35  Identities=23%  Similarity=0.322  Sum_probs=30.1

Q ss_pred             CEEEEecCCChHHHH-----HHHHHHHCCCEEEEEecCch
Q 017812           60 PVCIVTGATSGLGAA-----AAYALSREGFHVVLVGRSSH   94 (365)
Q Consensus        60 k~vlITGassGIG~~-----~a~~la~~G~~Vil~~r~~~   94 (365)
                      |++.|+++-||.|+.     +|..|+++|.+|.+++-+..
T Consensus         2 kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D~~   41 (232)
T d1hyqa_           2 RTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADIT   41 (232)
T ss_dssp             EEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCCS
T ss_pred             EEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence            689999999999874     57789999999999987753

>d2fpoa1 c.66.1.46 (A:10-192) Methylase YhhF {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methylase YhhF
species: Escherichia coli [TaxId: 562]

Probab=80.99  E-value=3.8  Score=31.43  Aligned_cols=77  Identities=12%  Similarity=0.144  Sum_probs=52.1

Q ss_pred             CCCCEEEEecC-CChHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHH
Q 017812           57 IKRPVCIVTGA-TSGLGAAAAYALSREGF-HVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQ  134 (365)
Q Consensus        57 ~~~k~vlITGa-ssGIG~~~a~~la~~G~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~  134 (365)
                      +.+.++|=.+| ||.+|.    +.+.+|+ +|+.++.+.+..+.+.+.+.... ..++.++..|+.+      +.   ..
T Consensus        42 ~~~~~vLDlfaGsG~~gi----ealsrGa~~v~~VE~~~~a~~~~k~N~~~~~-~~~~~ii~~d~~~------~l---~~  107 (183)
T d2fpoa1          42 IVDAQCLDCFAGSGALGL----EALSRYAAGATLIEMDRAVSQQLIKNLATLK-AGNARVVNSNAMS------FL---AQ  107 (183)
T ss_dssp             HTTCEEEETTCTTCHHHH----HHHHTTCSEEEEECSCHHHHHHHHHHHHHTT-CCSEEEECSCHHH------HH---SS
T ss_pred             cchhhhhhhhccccceee----eEEecCcceeEEEEEeechhhHHHHHHhhcc-ccceeeeeecccc------cc---cc
Confidence            45677775554 565554    4566898 89999999999988888876643 3466777776322      11   11


Q ss_pred             HHhccCCCCCeeEEEecCC
Q 017812          135 WLLDSDMHSSIQLLINNAG  153 (365)
Q Consensus       135 ~~~~~~~~~~id~lv~nAG  153 (365)
                            ...+.|+++.+.-
T Consensus       108 ------~~~~fDlIf~DPP  120 (183)
T d2fpoa1         108 ------KGTPHNIVFVDPP  120 (183)
T ss_dssp             ------CCCCEEEEEECCS
T ss_pred             ------cccccCEEEEcCc
Confidence                  3467999998764

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=80.46  E-value=3.8  Score=32.21  Aligned_cols=77  Identities=16%  Similarity=0.177  Sum_probs=53.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHh
Q 017812           58 KRPVCIVTGATSGLGAAAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLL  137 (365)
Q Consensus        58 ~~k~vlITGassGIG~~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~  137 (365)
                      .|.+||=.||++|.-......+...| +|+.++.+++.++.+.+..+..   .++.++..|..++.....          
T Consensus        56 pg~~VLDlGcG~G~~~~~la~~v~~g-~V~gvDis~~~i~~a~~~a~~~---~ni~~i~~d~~~~~~~~~----------  121 (209)
T d1nt2a_          56 GDERVLYLGAASGTTVSHLADIVDEG-IIYAVEYSAKPFEKLLELVRER---NNIIPLLFDASKPWKYSG----------  121 (209)
T ss_dssp             SSCEEEEETCTTSHHHHHHHHHTTTS-EEEEECCCHHHHHHHHHHHHHC---SSEEEECSCTTCGGGTTT----------
T ss_pred             CCCEEEEeCCcCCHHHHHHHHhccCC-eEEEEeCCHHHHHHHHHHhhcc---CCceEEEeeccCcccccc----------
Confidence            37899999999885333333333334 9999999999988887776553   478888899888765322          


Q ss_pred             ccCCCCCeeEEEec
Q 017812          138 DSDMHSSIQLLINN  151 (365)
Q Consensus       138 ~~~~~~~id~lv~n  151 (365)
                         ....+|+++++
T Consensus       122 ---~~~~vd~v~~~  132 (209)
T d1nt2a_         122 ---IVEKVDLIYQD  132 (209)
T ss_dssp             ---TCCCEEEEEEC
T ss_pred             ---ccceEEEEEec
Confidence               23457877765

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=80.25  E-value=1.8  Score=29.15  Aligned_cols=67  Identities=13%  Similarity=0.051  Sum_probs=43.1

Q ss_pred             EEEecCCChHHH-HHHHHHHHCCCEEEEEecCchhHHHHHHHHHhhcCCCceEEEEecCCChhhHHHHHHHHHHHHhccC
Q 017812           62 CIVTGATSGLGA-AAAYALSREGFHVVLVGRSSHLLSETMADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSD  140 (365)
Q Consensus        62 vlITGassGIG~-~~a~~la~~G~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~~~~~~~~~~~~~  140 (365)
                      +-+. |-+|+|. ++|+.|.++|++|...|++....   .+.|++.  +.++. ..-|.++                   
T Consensus         4 ihfi-GIgG~GMs~LA~~L~~~G~~VsGSD~~~~~~---t~~L~~~--Gi~i~-~gh~~~~-------------------   57 (89)
T d1j6ua1           4 IHFV-GIGGIGMSAVALHEFSNGNDVYGSNIEETER---TAYLRKL--GIPIF-VPHSADN-------------------   57 (89)
T ss_dssp             EEEE-TTTSHHHHHHHHHHHHTTCEEEEECSSCCHH---HHHHHHT--TCCEE-SSCCTTS-------------------
T ss_pred             EEEE-eECHHHHHHHHHHHHhCCCeEEEEeCCCChh---HHHHHHC--CCeEE-eeecccc-------------------
Confidence            3444 4567887 78999999999999999986543   2345444  33321 1222222                   


Q ss_pred             CCCCeeEEEecCCcc
Q 017812          141 MHSSIQLLINNAGIL  155 (365)
Q Consensus       141 ~~~~id~lv~nAG~~  155 (365)
                       ....|.+|...++.
T Consensus        58 -i~~~d~vV~SsAI~   71 (89)
T d1j6ua1          58 -WYDPDLVIKTPAVR   71 (89)
T ss_dssp             -CCCCSEEEECTTCC
T ss_pred             -cCCCCEEEEecCcC
Confidence             13489999999985